BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|255764468|ref|YP_003064806.2| permease protein [Candidatus Liberibacter asiaticus str. psy62] (361 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|255764468|ref|YP_003064806.2| permease protein [Candidatus Liberibacter asiaticus str. psy62] gi|254547819|gb|ACT56866.2| permease protein [Candidatus Liberibacter asiaticus str. psy62] Length = 361 Score = 728 bits (1880), Expect = 0.0, Method: Compositional matrix adjust. Identities = 361/361 (100%), Positives = 361/361 (100%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV Sbjct: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI Sbjct: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD Sbjct: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL Sbjct: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR Sbjct: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK Sbjct: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 Query: 361 I 361 I Sbjct: 361 I 361 >gi|315122195|ref|YP_004062684.1| permease protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495597|gb|ADR52196.1| permease protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 283 Score = 353 bits (907), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 187/283 (66%), Positives = 224/283 (79%), Gaps = 1/283 (0%) Query: 80 MNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLA 139 MNRN EL IIDNTGTSRITLIKPVLF AILLSIFLFI EN +EPK R+ IK+L A+A L Sbjct: 1 MNRNAELFIIDNTGTSRITLIKPVLFFAILLSIFLFILENTLEPKYRTEIKRLGAQAYLN 60 Query: 140 LTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQ 199 LT S LEENLFF L+++ YIK+SK NPNNT+QGIF +DS D H+IYYA+SG +DL+++ Sbjct: 61 LTLSSLEENLFFNLNNNFYIKVSKRNPNNTMQGIFAIDSSDPIIHRIYYAKSGFVDLEKK 120 Query: 200 AIILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANSSTIVLKANDQNLSFLLNPNPNNP 258 IIL GEVHRKS +SKDISIMKF SY L +S I LKA+DQNLSFLLNP+PNNP Sbjct: 121 IIILQKGEVHRKSSVSKDISIMKFDSYALDMQSLLAKQDITLKAHDQNLSFLLNPDPNNP 180 Query: 259 NYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGV 318 +YR + YRSE HKRLTQWLFP++FGLISI++ +K + +R +K+HP I+L +SF V Sbjct: 181 SYRENFIGKYRSELHKRLTQWLFPIVFGLISILSIEKTSSLRHYRKVHPSLIALLLSFCV 240 Query: 319 FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTKI 361 F GFSYII IEQ+P YIPILYLF F +SSI +L+IKKKY KI Sbjct: 241 FSGFSYIIQGIEQSPSYIPILYLFFFVLSSILVLLIKKKYVKI 283 >gi|222085453|ref|YP_002543983.1| permease protein [Agrobacterium radiobacter K84] gi|221722901|gb|ACM26057.1| permease protein [Agrobacterium radiobacter K84] Length = 391 Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 143/366 (39%), Positives = 232/366 (63%), Gaps = 13/366 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK FE YI+R +G FL++ L ++ I W Q+LQRINLV+ S +S+ K++ ++PT+ Sbjct: 1 MKLFETYIVRRVGMMFLVALLPVLAIIWTTQVLQRINLVTDSGQSIGSFAKLATLILPTI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T LT+MN ++EL +++ G R +I+P++ LAI +S+F F +N+ Sbjct: 61 IPVVLPFALVIGITQTLTAMNSDSELTVMEAAGARRSIIIRPIMILAIAISVFSFFVDNM 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EPK R +Q+ A+A L + +EE F R++D LY++I++ L+G+F+VDSRD Sbjct: 121 VEPKARVAARQMVAEAYADLLSTVIEEKNFRRIEDGLYVQITQRMSGRILKGLFVVDSRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ----TESANSS 236 IYYA+ G++D ++++ DGEVHRK+ D+S++KF SY+ T+S + Sbjct: 181 PAFDLIYYAKEGAVDASGSSLLMRDGEVHRKTS-DGDVSVIKFDSYSFDLSDMTQSRGQA 239 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV-AADK 295 T L+A D++L FLLNP+PN+ +Y+ + YRSE H+RLT W P IF LIS+V A D Sbjct: 240 T--LRAGDRSLGFLLNPDPNDADYKAK-PSGYRSELHRRLTDWALPAIFALISLVIAGDA 296 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCIS--SIFLLM 353 R+ + ++HP+ +L+I+F + W Y ++IE PY++ ILY + +IFLL Sbjct: 297 RS--HREARLHPMVSALTIAFALRWADFYAANQIETAPYFVGILYGINIAATLIAIFLLF 354 Query: 354 IKKKYT 359 ++ + Sbjct: 355 RNRRMS 360 >gi|190891136|ref|YP_001977678.1| permease [Rhizobium etli CIAT 652] gi|190696415|gb|ACE90500.1| putative permease protein [Rhizobium etli CIAT 652] Length = 403 Score = 285 bits (729), Expect = 8e-75, Method: Compositional matrix adjust. Identities = 141/366 (38%), Positives = 231/366 (63%), Gaps = 17/366 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YILR +G+ FL++ L ++ I W Q+LQRINLV+ S +S+ K++ ++P++ Sbjct: 11 MKLLETYILRRVGQMFLVALLPVLAIIWTTQVLQRINLVTDSGQSIGSFAKLATMILPSI 70 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T LT+MN ++EL +ID G R L++P+L LA ++S+F F +NI Sbjct: 71 IPVVLPFALVIAITQTLTTMNNDSELTVIDAAGARRSILVRPILLLAAVISVFSFFVDNI 130 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP+ ++ +Q+ A+ L S +EE F ++D+ LY++ISK L+G+F+ D RD Sbjct: 131 VEPRAKTVARQMIAETYADLLSSVIEEKTFRKIDEGLYVQISKRLAGRMLKGLFVADERD 190 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ----TESANSS 236 IYYA+ G++D +I++DGEVHRK+P ++S++ F SY+ TES + Sbjct: 191 PAYELIYYAKEGAVDDSGTTLIMHDGEVHRKTP-DGNVSVINFDSYSFDLSDMTESRGQA 249 Query: 237 TIVLKANDQNLSFLLNPNPNNPNY--RPELLETYRSEFHKRLTQWLFPVIFGLISI-VAA 293 T LKA+D++L FL NP+PN+ +Y RP ++YR+E H+RLT W+ PV+F L S+ +A Sbjct: 250 T--LKASDRDLWFLFNPDPNDKDYTIRP---QSYRAELHRRLTDWILPVVFALFSLAIAG 304 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF--LFCISSIFL 351 D R+ + ++HP+ +L+ +F + W Y ++I+ +P YI +LY + I SI Sbjct: 305 DARS--HREARLHPMVSALAYAFALRWAAFYAANQIDTDPEYIAVLYGLPIVSSIVSIIF 362 Query: 352 LMIKKK 357 L + K+ Sbjct: 363 LSLHKR 368 >gi|86357092|ref|YP_468984.1| putative permease protein [Rhizobium etli CFN 42] gi|86281194|gb|ABC90257.1| putative permease protein [Rhizobium etli CFN 42] Length = 393 Score = 285 bits (728), Expect = 9e-75, Method: Compositional matrix adjust. Identities = 141/366 (38%), Positives = 230/366 (62%), Gaps = 17/366 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YILR +G+ FL++ L ++ I W Q+LQRINLV+ S +S+ K++ ++P++ Sbjct: 1 MKLLETYILRRVGQMFLVALLPVLAIIWTTQVLQRINLVTDSGQSIGSFAKLATMILPSI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T LT+MN ++EL +ID G R L++P+L LA ++S+F F +NI Sbjct: 61 IPVVLPFALVIAITQTLTTMNNDSELTVIDAAGARRTILVRPILLLAAVISVFSFFVDNI 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP+ ++ +Q+ A+ L S +EE F +LD+ LY++IS+ L+G+F+ D RD Sbjct: 121 VEPRAKTVARQMIAETYADLLSSVIEEKTFRKLDEGLYVQISQRLAGRMLKGLFVADERD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ----TESANSS 236 IYYA+ G++D +I++DGEVHRK+P ++S++ F SY+ TES + Sbjct: 181 PAYELIYYAKEGAVDDTGTTLIMHDGEVHRKTP-DGNVSVINFDSYSFDLSDMTESRGQA 239 Query: 237 TIVLKANDQNLSFLLNPNPNNPNY--RPELLETYRSEFHKRLTQWLFPVIFGLISI-VAA 293 T LKA+D++L FL NP+PN+ +Y RP ++YR+E H+RLT W+ PV+F L S+ +A Sbjct: 240 T--LKASDRDLWFLFNPDPNDKDYTIRP---QSYRAELHRRLTDWILPVVFALFSLAIAG 294 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF--LFCISSIFL 351 D R+ + ++HP+ +L +F + W Y ++I+ +P YI +LY + I SI Sbjct: 295 DARS--HREARLHPMVSALGYAFALRWAAFYAANQIDTDPEYIAVLYALPIVSSIVSIIF 352 Query: 352 LMIKKK 357 L + K+ Sbjct: 353 LGLHKR 358 >gi|209548671|ref|YP_002280588.1| permease YjgP/YjgQ family protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534427|gb|ACI54362.1| permease YjgP/YjgQ family protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 393 Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 133/345 (38%), Positives = 222/345 (64%), Gaps = 11/345 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YILR +G+ FL++ L ++ I W Q+LQRINLV+ S +S+ K++ ++P++ Sbjct: 1 MKLLETYILRRVGQMFLVALLPVLAIIWTTQVLQRINLVTDSGQSIGSFAKLATMILPSI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T LT+MN ++EL +ID G R LI+P+L LA ++S+F F +N+ Sbjct: 61 IPVVLPFALVIAITQTLTTMNNDSELTVIDAAGARRSVLIRPILLLAAVVSVFSFFVDNV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP+ ++ ++Q+ A+ L S +EE F +LD+ LY++ISK L+G+F+ D RD Sbjct: 121 VEPRAKTVVRQMIAETYADLLSSVIEEKTFRKLDEGLYVQISKRMAGRMLKGLFVADERD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT--LQTESANSSTI 238 IYYA+ G++D +I+++GEVHRK+P ++S++ F SY+ L + N Sbjct: 181 PAYELIYYAKEGAVDDTGTTLIMHEGEVHRKTP-DGNVSVINFDSYSFDLSDMTENRGQA 239 Query: 239 VLKANDQNLSFLLNPNPNNPNY--RPELLETYRSEFHKRLTQWLFPVIFGLISI-VAADK 295 L+A+D++L FLLNP+P + +Y RP ++YR+E H+RLT W+ PV+F L S+ +A D Sbjct: 240 TLRASDRDLWFLLNPDPADKDYTIRP---QSYRAELHRRLTDWILPVVFALFSLAIAGDA 296 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY 340 R+ + ++HP+ +L+ +F + W Y ++I+ +P YI +LY Sbjct: 297 RS--HREARLHPMVSALAYAFALRWAAFYAANQIDTDPEYIAVLY 339 >gi|241203949|ref|YP_002975045.1| permease YjgP/YjgQ family protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857839|gb|ACS55506.1| permease YjgP/YjgQ family protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 393 Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 137/364 (37%), Positives = 229/364 (62%), Gaps = 13/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YILR +G+ FL++ L ++ I W Q+LQRINLV+ S +S+ K++ ++P++ Sbjct: 1 MKLLETYILRRVGQMFLVALLPVLAIIWTTQVLQRINLVTDSGQSIGSFAKLATMILPSI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T LT+MN ++EL +ID G R LI+P+L LA +S+F F +N+ Sbjct: 61 IPVVLPFALVIAITQTLTTMNNDSELTVIDAAGARRSVLIRPILLLAAAISVFSFFVDNV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP+ ++ ++Q+ A+ L S +EE F +LD+ LY++ISK L+G+F+ D RD Sbjct: 121 VEPRAKTVVRQMIAETYADLLSSVIEEKTFRKLDEGLYVQISKRMAGRMLKGLFVADERD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT--LQTESANSSTI 238 IYYA+ G++D +I+++GEVHRK+P ++S++ F SY+ L + N Sbjct: 181 PAYELIYYAKEGAVDDTGTTLIMHEGEVHRKTP-DGNVSVINFDSYSFDLSDMTENRGQA 239 Query: 239 VLKANDQNLSFLLNPNPNNPNY--RPELLETYRSEFHKRLTQWLFPVIFGLISI-VAADK 295 L+A+D++L FL+NP+P + +Y RP ++YR+E H+RLT W+ PV+F L S+ +A D Sbjct: 240 TLRASDRDLWFLINPDPADKDYTIRP---QSYRAELHRRLTDWILPVVFALFSLAIAGDA 296 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL--FLFCISSIFLLM 353 R+ + ++HP+ +L+ +F + W Y ++I+ +P YI +LY + I SI L Sbjct: 297 RS--HREARLHPMVSALAYAFAMRWAAFYAANQIDTDPEYIAVLYAIPIVSSIVSIVFLG 354 Query: 354 IKKK 357 + K+ Sbjct: 355 LHKR 358 >gi|116251335|ref|YP_767173.1| hypothetical protein RL1569 [Rhizobium leguminosarum bv. viciae 3841] gi|115255983|emb|CAK07064.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae 3841] Length = 393 Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 138/366 (37%), Positives = 230/366 (62%), Gaps = 17/366 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YILR +G+ FL++ L ++ I W Q+LQRINLV+ S +S+ K++ ++P++ Sbjct: 1 MKLLETYILRRVGQMFLVALLPVLAIIWTTQVLQRINLVTDSGQSIGSFAKLATMILPSI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T LT+MN ++EL +ID G R LI+P+L LA ++S+F F +N+ Sbjct: 61 IPVVLPFALVIAITQTLTTMNNDSELTVIDAAGARRSVLIRPILLLAAVISVFSFFVDNV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP+ ++ ++Q+ A+ L S +EE F +LD+ LY++IS+ L+G+F+ D RD Sbjct: 121 VEPRAKTVVRQMIAETYADLLSSVIEEKTFRKLDEGLYVQISQRMAGRMLKGLFVADERD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ----TESANSS 236 IYYA+ G++D +I++ GEVHRK+P ++S++ F SY+ TES + Sbjct: 181 PAYELIYYAKEGAVDDTGTTLIMHQGEVHRKTP-DGNVSVINFDSYSFDLSDMTESRGQA 239 Query: 237 TIVLKANDQNLSFLLNPNPNNPNY--RPELLETYRSEFHKRLTQWLFPVIFGLISI-VAA 293 T L+A+D++L FL NP+P + +Y RP ++YR+E H+RLT W+ PV+F L S+ +A Sbjct: 240 T--LRASDRDLWFLFNPDPADKDYTIRP---QSYRAELHRRLTDWILPVVFALFSLAIAG 294 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL--FLFCISSIFL 351 D R+ + ++HP+ +L+ +F + W Y ++I+ +P YI +LY + I SI Sbjct: 295 DARS--HREARLHPMVSALAYAFAMRWAAFYAANQIDTDPEYIAVLYAIPIVSSIVSIVF 352 Query: 352 LMIKKK 357 L + K+ Sbjct: 353 LGLHKR 358 >gi|218672884|ref|ZP_03522553.1| putative permease protein [Rhizobium etli GR56] Length = 380 Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 122/323 (37%), Positives = 205/323 (63%), Gaps = 11/323 (3%) Query: 16 FLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTN 75 FL++ L ++ I W Q+LQRINLV+ S +S+ K++ ++P+++P+V PF + T Sbjct: 3 FLVALLPVLAIIWTTQVLQRINLVTDSGQSIGSFAKLATMILPSIIPVVLPFALVIAITQ 62 Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAK 135 LT+MN ++EL +ID G R LI+P+L LA ++S+F F +NI+EP+ ++ +Q+ A+ Sbjct: 63 TLTTMNNDSELTVIDAAGARRSILIRPILLLAAVISVFSFFVDNIVEPRAKTVARQMIAE 122 Query: 136 AQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSID 195 L S +EE F ++D+ LY++ISK L+G+F+ D RD IYYA+ G++D Sbjct: 123 TYADLLSSVIEEKTFRKIDEGLYVQISKRLAGRMLKGLFVADERDPAYELIYYAKEGAVD 182 Query: 196 LDRQAIILNDGEVHRKSPISKDISIMKFKSYT--LQTESANSSTIVLKANDQNLSFLLNP 253 +I++DGEVHRK+P ++S++ F SY+ L + N LKA+D++L FL NP Sbjct: 183 DTGTTLIMHDGEVHRKTP-DGNVSVINFDSYSFDLSDMTENRGQATLKASDRDLWFLFNP 241 Query: 254 NPNNPNY--RPELLETYRSEFHKRLTQWLFPVIFGLISI-VAADKRALVRQRKKIHPIFI 310 +PN+ ++ RP ++YR+E H+RLT W+ PV+F L S+ +A D R+ + ++HP+ Sbjct: 242 DPNDKDFTIRP---QSYRAELHRRLTDWILPVVFALFSLAIAGDARS--HREARLHPMVS 296 Query: 311 SLSISFGVFWGFSYIIHKIEQNP 333 +L+ +F W Y ++I+ +P Sbjct: 297 ALAYAFAFRWAAFYAANQIDTDP 319 >gi|15964907|ref|NP_385260.1| hypothetical protein SMc00584 [Sinorhizobium meliloti 1021] gi|307300977|ref|ZP_07580746.1| permease YjgP/YjgQ family protein [Sinorhizobium meliloti BL225C] gi|307317712|ref|ZP_07597150.1| permease YjgP/YjgQ family protein [Sinorhizobium meliloti AK83] gi|15074086|emb|CAC45733.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021] gi|306896474|gb|EFN27222.1| permease YjgP/YjgQ family protein [Sinorhizobium meliloti AK83] gi|306903932|gb|EFN34518.1| permease YjgP/YjgQ family protein [Sinorhizobium meliloti BL225C] Length = 390 Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 122/346 (35%), Positives = 211/346 (60%), Gaps = 11/346 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI R FL + L ++ I W Q L +NLV+ S +S+ LK++ ++P+V Sbjct: 1 MKLIERYIFRRATIMFLATLLPLMGIVWTTQALTNVNLVTDSGQSIIAFLKLATLILPSV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P++ PF + T L++MN ++EL ++ G+SR+++I+PV+FLA LS+ F +N Sbjct: 61 VPIILPFALVIGVTQTLSAMNTDSELTVLSAAGSSRMSIIRPVMFLAAGLSVLSFAIDNF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R ++++ A A L S ++EN F ++ D LY+++ LQGIF+ D+RD Sbjct: 121 VEPYSRVAVRKMIATAHADLLASVVQENAFRKITDGLYVQVGARRSGGVLQGIFVADARD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ----TESANSS 236 +YYA+ G++D +R A+++ DGEVHRK P D+SI+KF SY T A + Sbjct: 181 PNFELVYYAREGAVDEERSALVMKDGEVHRKLP-DGDVSIIKFDSYAFDLTDLTRMAGEA 239 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS-IVAADK 295 I +A D++L +LL+P+P++ Y+ L + +E H+R T+W FP++FGLI+ +V++D Sbjct: 240 NI--RAKDRDLFYLLDPDPDDEAYKRAPL-AFTAELHRRFTEWTFPLLFGLIALVVSSDA 296 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL 341 R+ + ++HP+ +L + + W Y + E + +++P++YL Sbjct: 297 RS--HREARVHPMVSALGAALVIRWMTFYAANSAEDSVWFVPLMYL 340 >gi|227821476|ref|YP_002825446.1| putative permease protein [Sinorhizobium fredii NGR234] gi|227340475|gb|ACP24693.1| putative permease protein [Sinorhizobium fredii NGR234] Length = 390 Score = 252 bits (644), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 120/346 (34%), Positives = 217/346 (62%), Gaps = 11/346 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI R FL + L ++ I W Q L +NLV+ S +S+ LK++ ++P+V Sbjct: 1 MKLIERYIFRRATIMFLATLLPLLGIVWTTQALSNVNLVTDSGQSIFAFLKLATLILPSV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P++ PF + T L+ MN ++EL +++ G+SR+++I+PV++LA+ LS+ F+ +N Sbjct: 61 VPIILPFALLIGVTQTLSVMNTDSELTVLNAAGSSRMSVIRPVIYLAVGLSVLSFVIDNF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R ++++ A A L S ++EN F R+ D LY++++ L GIF+ DSR+ Sbjct: 121 VEPYSRVAVRKMIATAHADLLSSVVQENAFRRITDGLYVQVAARRSGGVLHGIFVADSRN 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSY----TLQTESANSS 236 +YYA+ G++D +R A+++ DGEVHRK P +S++KF SY T T +A + Sbjct: 181 PNFELVYYAREGAVDEERSALVMKDGEVHRKLP-DGGVSVIKFDSYAFDLTDMTRTAGEA 239 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS-IVAADK 295 TI +A D++L +L++P+PN+P+Y+ L + +E H+RL++W +P++FGLI+ +V++D Sbjct: 240 TI--RAKDRDLFYLIDPDPNDPSYKRSPL-AFTAELHRRLSEWTYPLLFGLIALVVSSDA 296 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL 341 R+ + ++HP ++ + + W Y + E + +++P++YL Sbjct: 297 RS--HREARVHPTISAVGAALVIRWMTFYAGNSAEDSIWFVPLMYL 340 >gi|150395989|ref|YP_001326456.1| permease YjgP/YjgQ family protein [Sinorhizobium medicae WSM419] gi|150027504|gb|ABR59621.1| permease YjgP/YjgQ family protein [Sinorhizobium medicae WSM419] Length = 390 Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 122/357 (34%), Positives = 212/357 (59%), Gaps = 17/357 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI R FL + L ++ I W Q L +NLV+ S +S+ LK++ ++P+V Sbjct: 1 MKLIERYIFRRATIMFLATLLPLMGIVWTTQALANVNLVTDSGQSIIAFLKLATLILPSV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P++ PF + T L++MN ++EL ++ G+SR+++I+PV+FLA LS+ F +N Sbjct: 61 VPIILPFALVIGVTQTLSAMNTDSELTVLSAAGSSRMSIIRPVMFLAAGLSVLSFTIDNF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R +++++ A A L S ++EN F ++ D LY+++ L GIF+ D+RD Sbjct: 121 VEPYSRVSVRKMIATAHADLLASVVQENAFRKITDGLYVQVGARRSGGVLHGIFVADARD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSY-------TLQTESA 233 +YYA+ G++D R A+++ DGEVHRK P D+SI+KF SY T T A Sbjct: 181 PNFELVYYAREGAVDEGRSALVMKDGEVHRKLP-DGDVSIIKFDSYAFDLTDLTRMTGEA 239 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA- 292 N ++A D++L +LL+P+P++ Y+ + +E H+R T+W FP++FGLI++VA Sbjct: 240 N-----IRAKDRDLFYLLDPDPDDEAYK-RAPRAFAAELHRRFTEWTFPLLFGLIALVAS 293 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 +D R+ + ++HP+ +L + + W Y + E + +++P++YL ++ Sbjct: 294 SDARS--HREARVHPMVSALGAALVIRWMTFYAANSAEDSVWFVPLMYLIPLATGAL 348 >gi|15888448|ref|NP_354129.1| hypothetical protein Atu1108 [Agrobacterium tumefaciens str. C58] gi|15156140|gb|AAK86914.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58] Length = 389 Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 141/364 (38%), Positives = 220/364 (60%), Gaps = 13/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YILR + FL++ L ++ I W IQ+LQRINLV+ + +S+ + ++ ++PT+ Sbjct: 1 MKLLENYILRRTTQMFLVALLPVLAIIWTIQVLQRINLVTDTGQSMGSFMALATMILPTL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T + T+MN ++EL IID G R + +PVL LA +LS+F F N Sbjct: 61 IPVVLPFALVIGITQIFTTMNNDSELAIIDAAGAPRSVMYRPVLILAAVLSLFSFTITNF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 IEP R++ +Q+ A A L S +EE F + D LY++I++ L+G+F+ D RD Sbjct: 121 IEPPARNSARQMVAAAYADLLSSVIEEKTFRTIQDGLYVQIAQRQ-GRILKGLFVADRRD 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT--LQTESA-NSST 237 IYYA+ G ID ++ + DGEV +K+P K +SI+KF SY L T S S Sbjct: 180 PNFDLIYYAKEGMIDESGTSLTMRDGEVQQKTPDGK-VSIVKFLSYAFDLSTMSEKQDSE 238 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI-VAADKR 296 L D +L FLL+P+ NN +Y+ ET+RSE HKRL+ W+F F LIS+ +AAD R Sbjct: 239 PSLSPGDASLGFLLSPDENNASYK-RSPETFRSELHKRLSDWMFAFSFALISLAIAADSR 297 Query: 297 ALVRQRKKIHPIFISLSISFGVFW-GFSYIIHKIEQNPYYIPILYLF--LFCISSIFLLM 353 + + ++HP+ +L +F + W GF Y+ ++++Q+ +IP++Y L ++ F+LM Sbjct: 298 S--HREARLHPMVAALVTAFMLRWLGF-YVTNQVKQSAAFIPLVYAVPGLSGAAAAFVLM 354 Query: 354 IKKK 357 +K Sbjct: 355 TGRK 358 >gi|222148153|ref|YP_002549110.1| hypothetical protein Avi_1543 [Agrobacterium vitis S4] gi|221735141|gb|ACM36104.1| conserved hypothetical protein [Agrobacterium vitis S4] Length = 399 Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 126/362 (34%), Positives = 217/362 (59%), Gaps = 11/362 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YILR + + FL + L ++ I W Q+L RINLV+ + +S+ ++ ++PT+ Sbjct: 6 MKLLESYILRRVAQMFLTALLPVLAIIWTTQVLARINLVTDTGQSIGSFATLATLILPTI 65 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T LT+MN ++EL +ID G SR +++P+L A+ +S+ + N Sbjct: 66 IPIVMPFALVIGITQSLTAMNNDSELAVIDAAGASRAVILRPILLFALAISVITLVITNE 125 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 ++PK + +Q+ A A L + +EE F +++D LY++IS+ L+G+F+ D RD Sbjct: 126 VQPKVKVAARQMIANAYADLLSTVIEEKTFRKVEDGLYVQISQRLAGRVLKGLFVADYRD 185 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ----TESANSS 236 IYYA+ G++D A+I++DGEV RK+P +SI++F SY TE+ + Sbjct: 186 PAYSLIYYAREGAVDETGTALIMHDGEVQRKAP-GGTVSIVRFDSYAFDLSDLTETRGKA 244 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI-VAADK 295 ++ +D++LSFLLNP+ N+ +Y+ E YR+E HKR+T+WL P F LIS+ +A D Sbjct: 245 K--MRPSDRSLSFLLNPDTNDDDYKDHPGE-YRAELHKRMTEWLLPFAFALISLAIAGDA 301 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 R+ + ++HP+ +L+++ + W Y +K E N +I ++Y ++I LM+ Sbjct: 302 RS--HREARLHPMVSALTLALVLRWLTFYAANKSESNAAFIVLMYATPLASAAIATLMLM 359 Query: 356 KK 357 ++ Sbjct: 360 RQ 361 >gi|325292487|ref|YP_004278351.1| permease protein [Agrobacterium sp. H13-3] gi|325060340|gb|ADY64031.1| putative permease protein [Agrobacterium sp. H13-3] Length = 389 Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 139/364 (38%), Positives = 220/364 (60%), Gaps = 13/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YILR + FL++ L ++ I W IQ+LQRINLV+ + +S+ + ++ ++PT+ Sbjct: 1 MKLLENYILRRTTQMFLVALLPVLAIIWTIQVLQRINLVTDTGQSMGSFMALATMILPTL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T T+MN ++EL IID G+SR + +PV+ LA +LS F N Sbjct: 61 IPVVLPFALVIGITQTFTAMNNDSELAIIDAAGSSRSVMFRPVIILAAVLSALSFTITNF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 IEP R++ +Q+ A A L S +EE F + D LY++I++ L+G+F+ D RD Sbjct: 121 IEPPARNSARQMVAAAYADLLSSVIEEKTFRAVQDGLYVQIAQRQ-GRILKGLFVADRRD 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT--LQTESA-NSST 237 IYYA+ G ID ++ + DGEV +K+P K +SI+KF SY L T S +S Sbjct: 180 PNFDLIYYAKEGMIDESGTSLTMRDGEVQQKTPDGK-VSIVKFLSYAFDLSTMSEKQTSE 238 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV-AADKR 296 L D +L FLL+P+ NN +Y+ E++RSE HKRL+ W+F F LIS+V AAD R Sbjct: 239 PSLSPGDASLGFLLSPDENNASYK-RSPESFRSELHKRLSDWMFAFAFALISLVIAADAR 297 Query: 297 ALVRQRKKIHPIFISLSISFGVFW-GFSYIIHKIEQNPYYIPILYLF--LFCISSIFLLM 353 + + ++HP+ +L +F + W GF Y+ ++++Q+ +IP++Y L ++ F+L+ Sbjct: 298 S--HREARMHPMVAALVTAFMLRWLGF-YVTNQVKQSAAFIPLVYAVPGLSGAAAAFILI 354 Query: 354 IKKK 357 +K Sbjct: 355 TGRK 358 >gi|254718823|ref|ZP_05180634.1| hypothetical protein Bru83_04675 [Brucella sp. 83/13] gi|265983808|ref|ZP_06096543.1| permease YjgP/YjgQ family protein [Brucella sp. 83/13] gi|306838745|ref|ZP_07471579.1| permease YjgP/YjgQ family protein [Brucella sp. NF 2653] gi|264662400|gb|EEZ32661.1| permease YjgP/YjgQ family protein [Brucella sp. 83/13] gi|306406147|gb|EFM62392.1| permease YjgP/YjgQ family protein [Brucella sp. NF 2653] Length = 402 Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 118/364 (32%), Positives = 214/364 (58%), Gaps = 11/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYILR + F V I W +Q+LQRIN +++S ++ +++ S LIP+ Sbjct: 1 MRLIELYILRRVAIMFFAVLGAAVGITWTVQVLQRINFLTTSGQTFQTIVQFSSLLIPSA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T L++MN+++EL++I+ +G R +++P+L LA +S+ F+ N Sbjct: 61 IPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAATVSVTSFLIANY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R ++ + A A L ++E F +L D+LYI++++ + ++ G+FI DSRD Sbjct: 121 VEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQVAERRADGSIGGLFIADSRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYT--LQTESANSS 236 IYYA G+I +++ +GEV R++ +SI+KF SY L ++ Sbjct: 181 PTLDLIYYAADGAIASTPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAGD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI-VAADK 295 V+ A D+ L++LLNP+PN+P + L TY++E H+R TQW++P+IF +I++ +A D Sbjct: 241 DFVIFAKDRPLTYLLNPDPNDPMLQTRPL-TYKAELHRRFTQWIYPLIFAMIALAIAGDS 299 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY---LFLFCISSIFLL 352 R+ + ++ F ++S + V+W + + +++P YI ++Y L +F ++ LL Sbjct: 300 RS--HREARVSASFSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFILL 357 Query: 353 MIKK 356 ++ Sbjct: 358 TGRR 361 >gi|23501574|ref|NP_697701.1| hypothetical protein BR0687 [Brucella suis 1330] gi|254701470|ref|ZP_05163298.1| hypothetical protein Bsuib55_11511 [Brucella suis bv. 5 str. 513] gi|254704017|ref|ZP_05165845.1| hypothetical protein Bsuib36_08829 [Brucella suis bv. 3 str. 686] gi|256060812|ref|ZP_05450972.1| hypothetical protein Bneo5_10667 [Brucella neotomae 5K33] gi|261324804|ref|ZP_05964001.1| permease YjgP/YjgQ family protein [Brucella neotomae 5K33] gi|261752013|ref|ZP_05995722.1| permease YjgP/YjgQ family protein [Brucella suis bv. 5 str. 513] gi|261754672|ref|ZP_05998381.1| permease YjgP/YjgQ family protein [Brucella suis bv. 3 str. 686] gi|306845288|ref|ZP_07477864.1| permease YjgP/YjgQ family protein [Brucella sp. BO1] gi|23347487|gb|AAN29616.1| membrane protein, putative [Brucella suis 1330] gi|261300784|gb|EEY04281.1| permease YjgP/YjgQ family protein [Brucella neotomae 5K33] gi|261741766|gb|EEY29692.1| permease YjgP/YjgQ family protein [Brucella suis bv. 5 str. 513] gi|261744425|gb|EEY32351.1| permease YjgP/YjgQ family protein [Brucella suis bv. 3 str. 686] gi|306274447|gb|EFM56254.1| permease YjgP/YjgQ family protein [Brucella sp. BO1] Length = 402 Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 118/364 (32%), Positives = 214/364 (58%), Gaps = 11/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYILR + F V I W +Q+LQRIN +++S ++ +++ S LIP+ Sbjct: 1 MRLIELYILRRVAIMFFAVLGAAVGITWTVQVLQRINFLTTSGQTFQTIVQFSSLLIPSA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T L++MN+++EL++I+ +G R +++P+L LA +S+ F+ N Sbjct: 61 IPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAATVSVTSFLIANY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R ++ + A A L ++E F +L D+LYI++++ + ++ G+FI DSRD Sbjct: 121 VEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQVAERRADGSIGGLFIADSRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYT--LQTESANSS 236 IYYA G+I +++ +GEV R++ +SI+KF SY L ++ Sbjct: 181 PTLDLIYYAADGAIASTPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAGD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI-VAADK 295 V+ A D+ L++LLNP+PN+P + L TY++E H+R TQW++P+IF +I++ +A D Sbjct: 241 DFVIFAKDRPLTYLLNPDPNDPMLQTRPL-TYKAELHRRFTQWIYPLIFAMIALAIAGDS 299 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY---LFLFCISSIFLL 352 R+ + ++ F ++S + V+W + + +++P YI ++Y L +F ++ LL Sbjct: 300 RS--HREARVSASFSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFILL 357 Query: 353 MIKK 356 ++ Sbjct: 358 TGRR 361 >gi|161618656|ref|YP_001592543.1| permease YjgP/YjgQ family protein [Brucella canis ATCC 23365] gi|260566734|ref|ZP_05837204.1| permease YjgP/YjgQ family protein [Brucella suis bv. 4 str. 40] gi|161335467|gb|ABX61772.1| permease YjgP/YjgQ family protein [Brucella canis ATCC 23365] gi|260156252|gb|EEW91332.1| permease YjgP/YjgQ family protein [Brucella suis bv. 4 str. 40] Length = 402 Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 118/364 (32%), Positives = 214/364 (58%), Gaps = 11/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYILR + F V I W +Q+LQRIN +++S ++ +++ S LIP+ Sbjct: 1 MRLIELYILRRVAIMFFAVLGAAVGITWTVQVLQRINFLTTSGQTFQTIVQFSSLLIPSA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T L++MN+++EL++I+ +G R +++P+L LA +S+ F+ N Sbjct: 61 IPLVMPFVLIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAATVSVTSFLIANY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R ++ + A A L ++E F +L D+LYI++++ + ++ G+FI DSRD Sbjct: 121 VEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQVAERRADGSIGGLFIADSRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYT--LQTESANSS 236 IYYA G+I +++ +GEV R++ +SI+KF SY L ++ Sbjct: 181 PTLDLIYYAADGAIASTPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAGD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI-VAADK 295 V+ A D+ L++LLNP+PN+P + L TY++E H+R TQW++P+IF +I++ +A D Sbjct: 241 DFVIFAKDRPLTYLLNPDPNDPMLQTRPL-TYKAELHRRFTQWIYPLIFAMIALAIAGDS 299 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY---LFLFCISSIFLL 352 R+ + ++ F ++S + V+W + + +++P YI ++Y L +F ++ LL Sbjct: 300 RS--HREARVSASFSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFILL 357 Query: 353 MIKK 356 ++ Sbjct: 358 TGRR 361 >gi|256369122|ref|YP_003106630.1| permease YjgP/YjgQ family protein [Brucella microti CCM 4915] gi|255999282|gb|ACU47681.1| permease YjgP/YjgQ family protein [Brucella microti CCM 4915] Length = 402 Score = 229 bits (584), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 118/364 (32%), Positives = 214/364 (58%), Gaps = 11/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYILR + F V I W +Q+LQRIN +++S ++ +++ S LIP+ Sbjct: 1 MRLIELYILRRVAIMFFAVLGAAVGITWTVQVLQRINFLTTSGQTFQTIVQFSSLLIPSA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T L++MN+++EL++I+ +G R +++P+L LA +S+ F+ N Sbjct: 61 IPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAATVSVTSFLIANY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R ++ + A A L ++E F +L D+LYI++++ + ++ G+FI DSRD Sbjct: 121 VEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQVAERRADGSIGGLFIADSRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYT--LQTESANSS 236 IYYA G+I +++ +GEV R++ +SI+KF SY L ++ Sbjct: 181 PTLDLIYYAADGAIASTPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAGD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI-VAADK 295 V+ A D+ L++LLNP+PN+P + L TY++E H+R TQW++P+IF +I++ +A D Sbjct: 241 DFVIFAKDRPLTYLLNPDPNDPMLQTRPL-TYKAELHRRFTQWIYPLIFTMIALAIAGDS 299 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY---LFLFCISSIFLL 352 R+ + ++ F ++S + V+W + + +++P YI ++Y L +F ++ LL Sbjct: 300 RS--HREARVSASFSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFILL 357 Query: 353 MIKK 356 ++ Sbjct: 358 TGRR 361 >gi|163842957|ref|YP_001627361.1| permease YjgP/YjgQ family protein [Brucella suis ATCC 23445] gi|163673680|gb|ABY37791.1| permease YjgP/YjgQ family protein [Brucella suis ATCC 23445] Length = 402 Score = 228 bits (582), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 117/364 (32%), Positives = 214/364 (58%), Gaps = 11/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYILR + F V I W +++LQRIN +++S ++ +++ S LIP+ Sbjct: 1 MRLIELYILRRVAIMFFAVLGAAVGITWTVRVLQRINFLTTSGQTFQTIVQFSSLLIPSA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T L++MN+++EL++I+ +G R +++P+L LA +S+ F+ N Sbjct: 61 IPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAATVSVTSFLIANY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R ++ + A A L ++E F +L D+LYI++++ + ++ G+FI DSRD Sbjct: 121 VEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQVAERRADGSIGGLFIADSRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYT--LQTESANSS 236 IYYA G+I +++ +GEV R++ +SI+KF SY L ++ Sbjct: 181 PTLDLIYYAADGAIASTPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAGD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI-VAADK 295 V+ A D+ L++LLNP+PN+P + L TY++E H+R TQW++P+IF +I++ +A D Sbjct: 241 DFVIFAKDRPLTYLLNPDPNDPMLQTRPL-TYKAELHRRFTQWIYPLIFAMIALAIAGDS 299 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY---LFLFCISSIFLL 352 R+ + ++ F ++S + V+W + + +++P YI ++Y L +F ++ LL Sbjct: 300 RS--HREARVSASFSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFILL 357 Query: 353 MIKK 356 ++ Sbjct: 358 TGRR 361 >gi|153009928|ref|YP_001371143.1| permease YjgP/YjgQ family protein [Ochrobactrum anthropi ATCC 49188] gi|151561816|gb|ABS15314.1| permease YjgP/YjgQ family protein [Ochrobactrum anthropi ATCC 49188] Length = 402 Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 115/346 (33%), Positives = 205/346 (59%), Gaps = 8/346 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYILR + FL V I W +Q+LQRI+ +++S ++ +++ S LIP+ Sbjct: 1 MRLIELYILRRVAIMFLAVLGAAVGITWTVQVLQRIDFLTTSGQTFQTIIQFSSLLIPSA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T L++MN+++EL++I+ +G R +++P+L LA ++S+ F+ N Sbjct: 61 IPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAAVISVVSFLVANY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 ++P R ++ + A A L ++E F +L D+LYI++++ + ++ G+FI DSRD Sbjct: 121 VDPYARMNMRAMIANASADLMNVIVQEGNFRKLADNLYIQVAERRADGSIGGLFIADSRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYT--LQTESANSS 236 IYYA G+I +++ +GEV R+ +SI+KF SY L ++ Sbjct: 181 PSLDLIYYAADGAIASTPTGDMLLMQNGEVQRRDVSDGTVSIIKFNSYAFDLSQFASAGD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV-AADK 295 V+ A D+ LS+LLNP+PN+P + L Y++E H+RLTQWL+PV+F +I++ A D Sbjct: 241 DFVIYAKDRPLSYLLNPDPNDPILQTRPLR-YKAELHRRLTQWLYPVVFAMIALAFAGDS 299 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL 341 R+ + ++ F ++S + V+W + + +++ YI ++YL Sbjct: 300 RS--HREARVSASFSAISTALLVYWAGYFASDRADKDAGYIVVMYL 343 >gi|239831521|ref|ZP_04679850.1| permease YjgP/YjgQ family protein [Ochrobactrum intermedium LMG 3301] gi|239823788|gb|EEQ95356.1| permease YjgP/YjgQ family protein [Ochrobactrum intermedium LMG 3301] Length = 402 Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 115/346 (33%), Positives = 205/346 (59%), Gaps = 8/346 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYILR + FL V I W +Q+LQRI+ +++S ++ +++ S LIP+ Sbjct: 1 MRLIELYILRRVAIMFLAVLGAAVGITWTVQVLQRIDFLTTSGQTFQTIVQFSSLLIPSA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T L++MN+++EL++I+ +G R +++P+L LA ++S+ F+ N Sbjct: 61 IPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAAVISVVSFLVANY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 ++P R ++ + A A L ++E F +L D+LYI++++ + ++ G+FI DSRD Sbjct: 121 VDPYARMNMRAMIANASADLMNVIVQEGNFRKLADNLYIQVAERRADGSIGGLFIADSRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYT--LQTESANSS 236 IYYA G+I +++ +GEV R+ +SI+KF SY L ++ Sbjct: 181 PALDLIYYAADGAIASTPTGDMLLMQNGEVQRRDVSDGTVSIIKFNSYAFDLSQFASAGD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV-AADK 295 V+ A D+ LS+LLNP+PN+P + L Y++E H+RLTQWL+PV+F +I++ A D Sbjct: 241 DFVIYAKDRPLSYLLNPDPNDPILQTRPLR-YKAELHRRLTQWLYPVVFAMIALAFAGDS 299 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL 341 R+ + ++ F ++S + V+W + + +++ YI ++YL Sbjct: 300 RS--HREARVSASFSAISTALLVYWAGYFASDRADKDAGYIVLMYL 343 >gi|62289649|ref|YP_221442.1| hypothetical protein BruAb1_0706 [Brucella abortus bv. 1 str. 9-941] gi|82699577|ref|YP_414151.1| YjgP/YjgQ permease [Brucella melitensis biovar Abortus 2308] gi|189023899|ref|YP_001934667.1| permease [Brucella abortus S19] gi|237815139|ref|ZP_04594137.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] gi|254688959|ref|ZP_05152213.1| Predicted permease YjgP/YjgQ family protein [Brucella abortus bv. 6 str. 870] gi|254697093|ref|ZP_05158921.1| Predicted permease YjgP/YjgQ family protein [Brucella abortus bv. 2 str. 86/8/59] gi|254729989|ref|ZP_05188567.1| Predicted permease YjgP/YjgQ family protein [Brucella abortus bv. 4 str. 292] gi|256257207|ref|ZP_05462743.1| Predicted permease YjgP/YjgQ family protein [Brucella abortus bv. 9 str. C68] gi|260545599|ref|ZP_05821340.1| permease YjgP/YjgQ family protein [Brucella abortus NCTC 8038] gi|260754448|ref|ZP_05866796.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 6 str. 870] gi|260757667|ref|ZP_05870015.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 4 str. 292] gi|260761494|ref|ZP_05873837.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 2 str. 86/8/59] gi|260883477|ref|ZP_05895091.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 9 str. C68] gi|297248057|ref|ZP_06931775.1| YjgP/YjgQ family permease [Brucella abortus bv. 5 str. B3196] gi|62195781|gb|AAX74081.1| hypothetical membrane protein [Brucella abortus bv. 1 str. 9-941] gi|82615678|emb|CAJ10665.1| Predicted permease YjgP/YjgQ family [Brucella melitensis biovar Abortus 2308] gi|189019471|gb|ACD72193.1| Predicted permease YjgP/YjgQ family [Brucella abortus S19] gi|237789976|gb|EEP64186.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] gi|260097006|gb|EEW80881.1| permease YjgP/YjgQ family protein [Brucella abortus NCTC 8038] gi|260667985|gb|EEX54925.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 4 str. 292] gi|260671926|gb|EEX58747.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 2 str. 86/8/59] gi|260674556|gb|EEX61377.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 6 str. 870] gi|260873005|gb|EEX80074.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 9 str. C68] gi|297175226|gb|EFH34573.1| YjgP/YjgQ family permease [Brucella abortus bv. 5 str. B3196] Length = 402 Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 117/364 (32%), Positives = 213/364 (58%), Gaps = 11/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYILR + F V I W +Q+LQRIN +++S ++ +++ S LIP+ Sbjct: 1 MRLIELYILRRVAIMFFAVLGAAVGITWAVQVLQRINFLTTSGQTFQTIVQFSSLLIPSA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T L++MN+++EL++I+ +G R +++P+L LA +S+ F+ N Sbjct: 61 IPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAATVSVTSFLIANY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R ++ + A A L ++E F +L D+LYI++++ + ++ G+FI DSRD Sbjct: 121 VEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQVAERRADGSIGGLFIADSRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYT--LQTESANSS 236 IYYA G+I +++ +GEV R++ +SI+KF SY L ++ Sbjct: 181 PTLDLIYYAADGAIASTPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAGD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI-VAADK 295 V+ A D+ L++LLNP+ N+P + L TY++E H+R TQW++P+IF +I++ +A D Sbjct: 241 DFVIFAKDRPLTYLLNPDSNDPMLQTRPL-TYKAELHRRFTQWIYPLIFAMIALAIAGDS 299 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY---LFLFCISSIFLL 352 R+ + ++ F ++S + V+W + + +++P YI ++Y L +F ++ LL Sbjct: 300 RS--HREARVSASFSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFILL 357 Query: 353 MIKK 356 ++ Sbjct: 358 TGRR 361 >gi|254693441|ref|ZP_05155269.1| Predicted permease YjgP/YjgQ family protein [Brucella abortus bv. 3 str. Tulya] gi|261213694|ref|ZP_05927975.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 3 str. Tulya] gi|260915301|gb|EEX82162.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 3 str. Tulya] Length = 402 Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 117/364 (32%), Positives = 213/364 (58%), Gaps = 11/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYILR + F V I W +Q+LQRIN +++S ++ +++ S LIP+ Sbjct: 1 MRLIELYILRRVAFMFFAVLGAAVGITWAVQVLQRINFLTTSGQTFQTIVQFSSLLIPSA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T L++MN+++EL++I+ +G R +++P+L LA +S+ F+ N Sbjct: 61 IPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAATVSVTSFLIANY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R ++ + A A L ++E F +L D+LYI++++ + ++ G+FI DSRD Sbjct: 121 VEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQVAERRADGSIGGLFIADSRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYT--LQTESANSS 236 IYYA G+I +++ +GEV R++ +SI+KF SY L ++ Sbjct: 181 PTLDLIYYAADGAIASTPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAGD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI-VAADK 295 V+ A D+ L++LLNP+ N+P + L TY++E H+R TQW++P+IF +I++ +A D Sbjct: 241 DFVIFAKDRPLTYLLNPDSNDPMLQTRPL-TYKAELHRRFTQWIYPLIFAMIALAIAGDS 299 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY---LFLFCISSIFLL 352 R+ + ++ F ++S + V+W + + +++P YI ++Y L +F ++ LL Sbjct: 300 RS--HREARVSASFSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFILL 357 Query: 353 MIKK 356 ++ Sbjct: 358 TGRR 361 >gi|148559016|ref|YP_001258669.1| hypothetical protein BOV_0679 [Brucella ovis ATCC 25840] gi|254707609|ref|ZP_05169437.1| hypothetical protein BpinM_11726 [Brucella pinnipedialis M163/99/10] gi|254709808|ref|ZP_05171619.1| hypothetical protein BpinB_05961 [Brucella pinnipedialis B2/94] gi|256031299|ref|ZP_05444913.1| hypothetical protein BpinM2_11718 [Brucella pinnipedialis M292/94/1] gi|256159413|ref|ZP_05457191.1| hypothetical protein BcetM4_10693 [Brucella ceti M490/95/1] gi|256254707|ref|ZP_05460243.1| hypothetical protein BcetB_10510 [Brucella ceti B1/94] gi|261221887|ref|ZP_05936168.1| permease YjgP/YjgQ family protein [Brucella ceti B1/94] gi|261315099|ref|ZP_05954296.1| permease YjgP/YjgQ family protein [Brucella pinnipedialis M163/99/10] gi|261317346|ref|ZP_05956543.1| permease YjgP/YjgQ family protein [Brucella pinnipedialis B2/94] gi|265988384|ref|ZP_06100941.1| permease YjgP/YjgQ family protein [Brucella pinnipedialis M292/94/1] gi|265997850|ref|ZP_06110407.1| permease YjgP/YjgQ family protein [Brucella ceti M490/95/1] gi|148370273|gb|ABQ60252.1| putative membrane protein [Brucella ovis ATCC 25840] gi|260920471|gb|EEX87124.1| permease YjgP/YjgQ family protein [Brucella ceti B1/94] gi|261296569|gb|EEY00066.1| permease YjgP/YjgQ family protein [Brucella pinnipedialis B2/94] gi|261304125|gb|EEY07622.1| permease YjgP/YjgQ family protein [Brucella pinnipedialis M163/99/10] gi|262552318|gb|EEZ08308.1| permease YjgP/YjgQ family protein [Brucella ceti M490/95/1] gi|264660581|gb|EEZ30842.1| permease YjgP/YjgQ family protein [Brucella pinnipedialis M292/94/1] Length = 402 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 117/364 (32%), Positives = 213/364 (58%), Gaps = 11/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYILR + F V I W +Q+LQRIN +++S ++ +++ S LIP+ Sbjct: 1 MRLIELYILRRVAIMFFAVLGAAVGITWTVQVLQRINFLTTSGQTFQTIVQFSSLLIPSA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T L++MN+++EL++I+ +G R +++P+L LA +S+ F+ N Sbjct: 61 IPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAATVSVTSFLIANY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R ++ + A A L ++E F +L D+LYI++++ + ++ G+FI DSRD Sbjct: 121 VEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQVAERRADGSIGGLFIADSRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYT--LQTESANSS 236 IYYA G+I +++ +GEV R++ +SI+KF SY L ++ Sbjct: 181 PTLDLIYYAADGAIASTPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAGD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI-VAADK 295 V+ A D+ L++LLNP+ N+P + L TY++E H+R TQW++P+IF +I++ +A D Sbjct: 241 DFVIFAKDRPLTYLLNPDSNDPMLQTRPL-TYKAELHRRFTQWIYPLIFAMIALAIAGDS 299 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY---LFLFCISSIFLL 352 R+ + ++ F ++S + V+W + + +++P YI ++Y L +F ++ LL Sbjct: 300 RS--HREARVSASFSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFILL 357 Query: 353 MIKK 356 ++ Sbjct: 358 TGRR 361 >gi|294852049|ref|ZP_06792722.1| hypothetical protein BAZG_00965 [Brucella sp. NVSL 07-0026] gi|294820638|gb|EFG37637.1| hypothetical protein BAZG_00965 [Brucella sp. NVSL 07-0026] Length = 402 Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 117/364 (32%), Positives = 213/364 (58%), Gaps = 11/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYILR + F V I W +Q+LQRIN +++S ++ +++ S LIP+ Sbjct: 1 MRLIELYILRRVAIMFFAVLGAAVGITWTVQVLQRINFLTTSGQTFQTIVQFSSLLIPSA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T L++MN+++EL++I+ +G R +++P+L LA +S+ F+ N Sbjct: 61 IPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAATVSVTSFLIANY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R ++ + A A L ++E F +L D+LYI++++ + ++ G+FI DSRD Sbjct: 121 VEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQVAERRADGSIGGLFIADSRD 180 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYT--LQTESANSS 236 IYYA G+I +++ +GEV R++ +SI+KF SY L ++ Sbjct: 181 PTLDLIYYAADGAIASMPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAGD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI-VAADK 295 V+ A D+ L++LLNP+ N+P + L TY++E H+R TQW++P+IF +I++ +A D Sbjct: 241 DFVIFAKDRPLTYLLNPDSNDPMLQTRPL-TYKAELHRRFTQWIYPLIFAMIALAIAGDS 299 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY---LFLFCISSIFLL 352 R+ + ++ F ++S + V+W + + +++P YI ++Y L +F ++ LL Sbjct: 300 RS--HREARVSASFSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFILL 357 Query: 353 MIKK 356 ++ Sbjct: 358 TGRR 361 >gi|254713812|ref|ZP_05175623.1| hypothetical protein BcetM6_10745 [Brucella ceti M644/93/1] gi|254717130|ref|ZP_05178941.1| hypothetical protein BcetM_12054 [Brucella ceti M13/05/1] gi|261218945|ref|ZP_05933226.1| permease YjgP/YjgQ family protein [Brucella ceti M13/05/1] gi|261321556|ref|ZP_05960753.1| permease YjgP/YjgQ family protein [Brucella ceti M644/93/1] gi|260924034|gb|EEX90602.1| permease YjgP/YjgQ family protein [Brucella ceti M13/05/1] gi|261294246|gb|EEX97742.1| permease YjgP/YjgQ family protein [Brucella ceti M644/93/1] Length = 402 Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 117/364 (32%), Positives = 212/364 (58%), Gaps = 11/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYILR + F V I W +Q+LQRIN +++S ++ +++ S LIP+ Sbjct: 1 MRLIELYILRRVAIMFFAVLGAAVGITWTVQVLQRINFLTTSGQTFQTIVQFSSLLIPSA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T L++MN+++EL++I+ +G R ++P+L LA +S+ F+ N Sbjct: 61 IPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAAMRPILILAATVSVTSFLIANY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R ++ + A A L ++E F +L D+LYI++++ + ++ G+FI DSRD Sbjct: 121 VEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQVAERRADGSIGGLFIADSRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYT--LQTESANSS 236 IYYA G+I +++ +GEV R++ +SI+KF SY L ++ Sbjct: 181 PTLDLIYYAADGAIASTPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAGD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI-VAADK 295 V+ A D+ L++LLNP+ N+P + L TY++E H+R TQW++P+IF +I++ +A D Sbjct: 241 DFVIFAKDRPLTYLLNPDSNDPMLQTRPL-TYKAELHRRFTQWIYPLIFAMIALAIAGDS 299 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY---LFLFCISSIFLL 352 R+ + ++ F ++S + V+W + + +++P YI ++Y L +F ++ LL Sbjct: 300 RS--HREARVSASFSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFILL 357 Query: 353 MIKK 356 ++ Sbjct: 358 TGRR 361 >gi|319404056|emb|CBI77644.1| putative permease, YjgP/YjgQ family [Bartonella rochalimae ATCC BAA-1498] Length = 382 Score = 226 bits (575), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 131/362 (36%), Positives = 206/362 (56%), Gaps = 6/362 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ FELYIL+ I F L V I+W +QIL R+N ++++ ++ +L S LIP+V Sbjct: 1 MRIFELYILKRIFILFSAVLLGAVGISWTVQILARVNFLTTNGQTFLTILYFSSLLIPSV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ PF + T +L +MN+++EL +I +G S+ + KP+L LAIL S F N Sbjct: 61 TSLIMPFALVVAITTILLTMNQDSELAVISASGISKNIVWKPILLLAILASFTSFSITNF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P R ++Q+ A + L ++ E F L +LYI+I + N N T+ +FI D RD Sbjct: 121 IAPHARLNMRQILASSHSDLISLFIREGSFQELTKNLYIEIGERNANGTIGRLFIADQRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 Q YYA G+I +++ +ILNDGE+ R + ++SI+KF S+T N Sbjct: 181 PQLGLFYYATKGAIVNNKKGKFLILNDGEIERIDYKNDNVSIIKFSSHTFSLSEFIPNKK 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 T + D+ LS+L NPNP++P+Y+ + L+ YR+E H+R T+ L+P++F LI+I A Sbjct: 241 TPNIYPKDRPLSYLFNPNPSDPHYQRKPLQ-YRAELHRRFTECLYPIVFALIAIAIAGDA 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 RQ +I F +++ S ++W + K E NP YIP+LY+ IS + M+ K Sbjct: 300 HSYRQ-ARISATFSTITFSLLIYWLGYFFARKTENNPSYIPLLYVIPIGISLLTFFMLLK 358 Query: 357 KY 358 Y Sbjct: 359 DY 360 >gi|319405494|emb|CBI79113.1| conserved membrane hypothetical protein [Bartonella sp. AR 15-3] Length = 382 Score = 225 bits (574), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 133/358 (37%), Positives = 203/358 (56%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYIL+ I F L + I+W +QIL RIN +++S ++ +L S LIP+V Sbjct: 1 MRILELYILKRIFILFSAVMLGAIGISWTVQILARINFLTTSGQTFLTILYFSSLLIPSV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +V PF + T +L++MN++TEL +I +G S+ + KP+L LAIL S F N Sbjct: 61 TSLVIPFALVIAITIILSTMNQDTELAVISASGISKNIVWKPILLLAILASFTSFSITNF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P R ++Q+ A A L ++ E F L +LYI+I + N N T+ +FI D RD Sbjct: 121 IAPHARLNMRQMLANAHSDLISLFIREGSFQELAKNLYIEIGERNANGTIGRLFIADQRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 Q YYA G+I +++ +ILNDGE+ R + ++SI+KF SYT N Sbjct: 181 HQLGLFYYAAKGAIVNNKKGNFLILNDGEIERIDYKNDNVSIIKFSSYTFSLSEFIPNKK 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 T + D+ LS+L NP+PN+P+Y+ + + YR+EFH+R T+ L+P++F LI+IV Sbjct: 241 TPNIYPKDRPLSYLSNPSPNDPHYQRKPFQ-YRAEFHRRFTECLYPIVFALIAIVIVGNA 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RQ I F +++ S ++W + K E NP YIP+LY+ I S+ M+ Sbjct: 300 RSYRQ-AHIFETFSTITFSLLIYWLGYFFAQKAENNPSYIPLLYIIPIGICSLTFFML 356 >gi|225627184|ref|ZP_03785222.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] gi|260168438|ref|ZP_05755249.1| hypothetical protein BruF5_08728 [Brucella sp. F5/99] gi|261757900|ref|ZP_06001609.1| permease YjgP/YjgQ family protein [Brucella sp. F5/99] gi|225618019|gb|EEH15063.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] gi|261737884|gb|EEY25880.1| permease YjgP/YjgQ family protein [Brucella sp. F5/99] Length = 402 Score = 225 bits (574), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 117/364 (32%), Positives = 213/364 (58%), Gaps = 11/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYILR + F V I W +Q+LQRIN +++S ++ +++ S LIP+ Sbjct: 1 MRLIELYILRRVAIMFFAVLGAAVGITWTVQVLQRINFLTTSGQTFQTIVQFSSLLIPSA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T L++MN+++EL++I+ +G R +++P+L LA +S+ F+ N Sbjct: 61 IPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAATVSVTSFLIANY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R ++ + A A L ++E F +L D+LYI++++ + ++ G+FI DSRD Sbjct: 121 VEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQVAERRADGSIGGLFIADSRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYT--LQTESANSS 236 IYYA G+I +++ +GEV R++ +SI+KF SY L ++ Sbjct: 181 PTLDLIYYAADGAIASTPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAGD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI-VAADK 295 V+ A D+ L++LLNP+ N+P + L TY++E H+R TQW++P+IF +I++ +A D Sbjct: 241 DFVIFAKDRPLTYLLNPDSNDPMLQTRPL-TYKAELHRRFTQWIYPLIFAMIALAIAGDF 299 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY---LFLFCISSIFLL 352 R+ + ++ F ++S + V+W + + +++P YI ++Y L +F ++ LL Sbjct: 300 RS--HREARVSASFSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFILL 357 Query: 353 MIKK 356 ++ Sbjct: 358 TGRR 361 >gi|163868028|ref|YP_001609232.1| hypothetical protein Btr_0827 [Bartonella tribocorum CIP 105476] gi|161017679|emb|CAK01237.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476] Length = 396 Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 126/347 (36%), Positives = 210/347 (60%), Gaps = 10/347 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFI--VFIAWVIQILQRINLVSSSTESLNILLKISGYLIP 58 M+ E YIL+ + FL S + I V ++W +QIL RIN +++S ++L +L+ S L+P Sbjct: 1 MRIIEFYILKRV--FFLFSSVLIAAVGVSWTVQILARINFLTTSKQTLLTVLQFSLSLVP 58 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 +V+ +V PF + T L++MN+ +EL +I+ +G + T+ KPVL LAI+ S F Sbjct: 59 SVIFLVIPFALVIAVTTTLSAMNQESELAVINASGFPKSTVWKPVLLLAIVASCISFSIA 118 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 N + P+ R ++Q+ A A L ++ E F +L ++LYI+I + NPN TL+ +FI D Sbjct: 119 NFVVPQARLHMRQMLASAHFDLINLFISEGSFQKLANNLYIEIGERNPNGTLERLFIADQ 178 Query: 179 RDTQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTES--AN 234 RD +T YYA SI ++ +ILN+GE+ R + + +SI++F +YT + Sbjct: 179 RDPKTDLFYYATKASIVSNKNGRFLILNNGEIERVNHENNSVSIVQFSAYTFSLGEFIPS 238 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 T L D++LS+L NP+P +P Y+ + L+ Y++EFH+RLTQWL+P++F LI++ AA Sbjct: 239 DKTPTLYPKDRSLSYLQNPDPKDPYYQRKPLQ-YKAEFHRRLTQWLYPIVFSLIALAAAG 297 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL 341 RQ + F ++++SF V+W + K + + Y+P+LY+ Sbjct: 298 NVGSHRQARYCAN-FSAIALSFLVYWIGYFFAEKAKNDLAYVPLLYI 343 >gi|17987545|ref|NP_540179.1| hypothetical protein BMEI1262 [Brucella melitensis bv. 1 str. 16M] gi|225852207|ref|YP_002732440.1| permease YjgP/YjgQ family protein [Brucella melitensis ATCC 23457] gi|256044380|ref|ZP_05447284.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 1 str. Rev.1] gi|256113223|ref|ZP_05454091.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 3 str. Ether] gi|256264285|ref|ZP_05466817.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 2 str. 63/9] gi|260563732|ref|ZP_05834218.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 1 str. 16M] gi|265990798|ref|ZP_06103355.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 1 str. Rev.1] gi|265994634|ref|ZP_06107191.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 3 str. Ether] gi|17983248|gb|AAL52443.1| hypothetical membrane spanning protein [Brucella melitensis bv. 1 str. 16M] gi|225640572|gb|ACO00486.1| permease YjgP/YjgQ family protein [Brucella melitensis ATCC 23457] gi|260153748|gb|EEW88840.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 1 str. 16M] gi|262765747|gb|EEZ11536.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 3 str. Ether] gi|263001582|gb|EEZ14157.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 1 str. Rev.1] gi|263094545|gb|EEZ18354.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 2 str. 63/9] Length = 402 Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 117/364 (32%), Positives = 212/364 (58%), Gaps = 11/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYILR + F V I W +Q+LQRIN +++S ++ +++ S LIP+ Sbjct: 1 MRLIELYILRRVAIMFFAVLGAAVGITWTVQVLQRINFLTTSGQTFQTIVQFSSLLIPSA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T L++MN+++EL++I+ +G R +++P+L LA +S+ F+ N Sbjct: 61 IPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAATVSVTSFLIANY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R ++ + A A L ++E F +L D+LYI+I++ + ++ G+FI DS D Sbjct: 121 VEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQIAERRADGSIGGLFIADSCD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYT--LQTESANSS 236 IYYA G+I +++ +GEV R++ +SI+KF SY L ++ Sbjct: 181 PTLDLIYYAADGAIASTPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAGD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI-VAADK 295 V+ A D+ L++LLNP+ N+P + L TY++E H+R TQW++P+IF +I++ +A D Sbjct: 241 DFVIFAKDRPLTYLLNPDSNDPMLQTRPL-TYKAELHRRFTQWIYPLIFAMIALAIAGDS 299 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY---LFLFCISSIFLL 352 R+ + ++ F ++S + V+W + + +++P YI ++Y L +F ++ LL Sbjct: 300 RS--HREARVSASFSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFILL 357 Query: 353 MIKK 356 ++ Sbjct: 358 TGRR 361 >gi|240850232|ref|YP_002971625.1| putative permease, YjgP/YjgQ family [Bartonella grahamii as4aup] gi|240267355|gb|ACS50943.1| putative permease, YjgP/YjgQ family [Bartonella grahamii as4aup] Length = 396 Score = 223 bits (567), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 123/358 (34%), Positives = 212/358 (59%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ E YIL+ + F + V ++W +QIL RIN +++S ++L +L+ S L+P+V Sbjct: 1 MRIIEFYILKRVLVLFSSVMIAAVGVSWTVQILARINFLTTSKQTLLTVLQFSLSLVPSV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V PF + T +L++M++++EL +I+ +G + T+ KP+L LAI+ S F N Sbjct: 61 VFLVIPFALVIAITTILSAMHQDSELAVINASGFPKSTVWKPILLLAIVASCISFSIANF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ R ++Q+ A A L ++ E F +L ++LYI+I + NPN TL+ +FI D RD Sbjct: 121 VVPQARLHMRQMLASAHFDLINLFINEGSFQKLANNLYIEIGERNPNGTLERLFIADQRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 +T YYA SI ++ ++LN+GE+ R + + +SI++F SYT + Sbjct: 181 PKTDLFYYATDASIVSNKNGSFLVLNNGEIERVNHQNNSVSIVQFSSYTFSLGEFIPSDK 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 L D++LS+L NP+P +P Y+ + L+ Y++EFH+RLTQWL+P++F LI++ AA Sbjct: 241 APTLYPKDRSLSYLQNPDPKDPYYQRKPLQ-YKAEFHRRLTQWLYPIVFSLIALAAAGDV 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RQ + F ++++SF V+W + K + + YIP+LY+ S+ M+ Sbjct: 300 CSHRQARH-SANFSAIALSFLVYWIGYFFAEKAKNDLAYIPLLYIMPIGTSAFVFFML 356 >gi|319898731|ref|YP_004158824.1| permease, YjgP/YjgQ family [Bartonella clarridgeiae 73] gi|319402695|emb|CBI76241.1| putative permease, YjgP/YjgQ family [Bartonella clarridgeiae 73] Length = 385 Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 130/359 (36%), Positives = 207/359 (57%), Gaps = 8/359 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYIL+ I F + + I+W +QIL RIN +++S ++ +L S LIP+V Sbjct: 1 MRILELYILKRIFLLFSAVMIGAIGISWTVQILARINFLTTSGQTFLTVLHFSSLLIPSV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +V PF + T +L++MN+++EL +I +G + + KP+L LAIL S+ F N Sbjct: 61 TSLVMPFGLVIAITIILSTMNQDSELAVISASGIPKNIIWKPILLLAILTSLTSFSITNF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P R ++Q+ A L ++ E F L +LYI+I + N N T+ +FI D RD Sbjct: 121 IAPNARLNMRQMLANTHSDLINLFIREGSFQELTKNLYIEIGETNTNGTIGRLFIADQRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 Q YYA+ G I +++ +ILNDGE+ R + ++SI+KF S+T N Sbjct: 181 RQFGLFYYAKKGIIVNNKKGNFLILNDGEIERIDYKNDNVSIIKFSSHTFSLSEFITNKR 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI-VAADK 295 T + D+ LS+L NP+PN+P+Y+ + L+ YR+EFH+RLT+ L+P++F LI++ +A D Sbjct: 241 TPNIYPKDRPLSYLSNPDPNDPHYQRKPLQ-YRAEFHRRLTECLYPIVFALIAVAIAGDA 299 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R+ ++ I F +S S ++W + K E NP YIP+LY+ IS + M+ Sbjct: 300 RSY--RQTHISSTFSVISFSLLIYWLGYFFAKKTENNPVYIPLLYIIPIGISILTFFML 356 >gi|13476526|ref|NP_108096.1| hypothetical protein mll7866 [Mesorhizobium loti MAFF303099] gi|14027287|dbj|BAB54241.1| mll7866 [Mesorhizobium loti MAFF303099] Length = 400 Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 114/366 (31%), Positives = 219/366 (59%), Gaps = 13/366 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R FL + ++ + I W Q+L +I+LV+ S +S +++ ++P++ Sbjct: 1 MKVVERYIMRRAFVVFLAALVWTLAIVWTTQVLAKIDLVTDSGQSSLTFFEVAALILPSI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + L+ MN ++EL++++ G SR T+++P++ LA+ S+F F +N Sbjct: 61 IPIVVPFALVVAVAQTLSVMNSDSELVVVNAAGASRWTIVRPIMLLALAASVFSFAVDNG 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I+P R + L A+++ L ++E F +++D L+++I + P+N L GIF+ DSR+ Sbjct: 121 IDPYARQKNRALVAQSRADLLSLIIQEGTFRKIEDGLFLQIGERLPDNRLGGIFVADSRE 180 Query: 181 TQTHKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANS 235 + +YYA++GS+ ++R + +++NDG +HRK+ ++ D+S+++F SY + A + Sbjct: 181 EGVNLVYYAKTGSV-VERGGEKVLMMNDGVIHRKT-LTGDLSVIRFTSYAFDMSAFMAAA 238 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI-VAAD 294 S + L DQ +LLNPN N+ Y+ + + YR+E +R ++WL+ ++F LI++ VA D Sbjct: 239 SEVTLLPKDQTTQYLLNPNVNDKLYQ-QAPQQYRAEIDQRFSEWLYSMVFALIALAVAGD 297 Query: 295 KRALVRQRKKIHPIFISLSISFGVFW-GFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 R+ + +++P+ +++IS V W GF + K ++ P Y ++Y S++ + Sbjct: 298 ARS--HREARVNPLITAITISLFVRWLGF-FAASKADEVPQYAYMVYGVPIVASAVAIWF 354 Query: 354 IKKKYT 359 I T Sbjct: 355 IVSNRT 360 >gi|319407069|emb|CBI80706.1| putative permease, YjgP/YjgQ family [Bartonella sp. 1-1C] Length = 382 Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 128/362 (35%), Positives = 203/362 (56%), Gaps = 6/362 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYIL+ I F L V I+W +QIL RIN ++++ ++ ++ S LIP+V Sbjct: 1 MRILELYILKRIFILFSAVLLGAVGISWTVQILARINFLTTNGQTFLTIVYFSSLLIPSV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ PF + T +L++MN+++EL +I +G S+ + KP+L LA+L S F N Sbjct: 61 TSLIIPFALVVAITTILSTMNQDSELAVISASGISKNIVWKPILLLAVLASFTSFSITNF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P R ++Q+ A + L ++ E F L +LYI+I + N N T+ +FI D RD Sbjct: 121 IAPHARLNMRQILASSHSDLISLFIREGSFQELTKNLYIEIGERNANGTIGRLFIADQRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 Q YYA G+I +++ +ILNDGE+ R + ++SI+KF S+T N Sbjct: 181 PQLGLFYYATKGAIVNNKKGKFLILNDGEIERIDYKNDNVSIIKFSSHTFSLSEFIPNKK 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 T + D+ LS+L NPNPN+ +Y+ + L+ YR+E H+R T+ L+P++F LI I A Sbjct: 241 TPNIYPKDRPLSYLFNPNPNDSHYQRKPLQ-YRAELHRRFTECLYPIVFALIVIAIAGDA 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 RQ +I F +++ S ++W + K E NP YIP+LY+ IS + M+ Sbjct: 300 HSYRQ-ARISATFSTITFSLLIYWLGYFFARKTENNPSYIPLLYIIPIGISLLIFFMLLT 358 Query: 357 KY 358 Y Sbjct: 359 DY 360 >gi|121602513|ref|YP_988823.1| YjgP/YjgQ permease [Bartonella bacilliformis KC583] gi|120614690|gb|ABM45291.1| putative permease, YjgP/YjgQ family [Bartonella bacilliformis KC583] Length = 396 Score = 216 bits (550), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 127/363 (34%), Positives = 205/363 (56%), Gaps = 8/363 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYIL+ I F V I W +QIL RIN +++S ++ L S LIP+V Sbjct: 1 MRILELYILKRIFILFSAVITATVCIIWTVQILARINFLTTSGQTFLTALYFSSLLIPSV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V PF + L+ MN+++EL II +G + T+ KP+LFLAIL S F N Sbjct: 61 ISLVIPFALMIAIITTLSRMNQDSELTIISASGIPKTTIWKPILFLAILASCASFFITNF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ R ++++ A A L ++ E F +L ++LYI I + P+ T+ +FI D RD Sbjct: 121 VAPQARLHMREMLASAHSDLINLFIHEGSFQKLTNNLYIGIGERYPDGTIGRLFIADQRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 + +YYA G+I ++ ++LN+GE+ R + + +SI+KF SYT N Sbjct: 181 PKIDLLYYATKGAIVSNKSGNILVLNNGEIKRLNHQNDSVSIIKFSSYTFNLSEFIPNDR 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + D+ LS+L P+P++PNY+ + L+ Y++EFH+RLT+WL+P++F LI++ AA Sbjct: 241 IPTIYPKDRPLSYLYRPDPDDPNYQRQPLQ-YKAEFHRRLTEWLYPIVFALIAVAAAGDA 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI--FLLMI 354 RQ +I F ++ S ++ + + K E N YIP+LY+ S + F L+I Sbjct: 300 RSYRQ-ARISTTFFAIIFSLLIYLVRYFFVEKTENNLAYIPLLYITPLGTSILIFFRLLI 358 Query: 355 KKK 357 +K Sbjct: 359 NRK 361 >gi|49474101|ref|YP_032143.1| hypothetical protein BQ04630 [Bartonella quintana str. Toulouse] gi|49239605|emb|CAF25962.1| hypothetical protein BQ04630 [Bartonella quintana str. Toulouse] Length = 396 Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 123/359 (34%), Positives = 210/359 (58%), Gaps = 8/359 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYIL+ I F + + I+W +QIL RIN +++S ++L +L+ S L+P+V Sbjct: 1 MRIIELYILKRILILFSAVMIAAISISWTVQILARINFLTTSRQTLLTVLQFSLSLVPSV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V PF + T+ L++MN+++EL II G + T+ KP+L LA++ S F+ N Sbjct: 61 IFLVIPFALVIAITSTLSAMNQDSELAIISAAGFPKSTVWKPILLLALIASCASFLIANF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ R ++Q+ A A L ++ E F +L ++LYI+I + NP+ TL +FI D RD Sbjct: 121 VAPQARFHMRQMLANAHSDLINLFINEGSFQKLANNLYIEIGERNPDGTLGRLFIADQRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 + YYA SI ++ ++LN+GE+ R + + +SI++F YT N Sbjct: 181 PKIDFFYYATKASIVSNKSGNFLVLNNGEIERINHQNDSVSIVQFSFYTFSLSEFIPNDK 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA-DK 295 T + D+ LS+LLNP+P +P Y+ L+ YR+EFH+RLT+WL+ ++F LI++ AA D Sbjct: 241 TPTIYPKDRPLSYLLNPDPKDPYYQRRPLQ-YRAEFHRRLTEWLYSIVFSLIALAAARDA 299 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R+ + R + F +++ S V+W + K + + Y+P+LY+ +S + M+ Sbjct: 300 RSYRKTRNFAN--FSAIAFSLLVYWIGHFFAEKAKSDLAYVPLLYITPIGVSILVFFML 356 >gi|326408706|gb|ADZ65771.1| permease YjgP/YjgQ family protein [Brucella melitensis M28] gi|326538430|gb|ADZ86645.1| permease YjgP/YjgQ family protein [Brucella melitensis M5-90] Length = 388 Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 109/341 (31%), Positives = 202/341 (59%), Gaps = 11/341 (3%) Query: 24 VFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRN 83 V I W +Q+LQRIN +++S ++ +++ S LIP+ +P+V PF + T L++MN++ Sbjct: 10 VGITWTVQVLQRINFLTTSGQTFQTIVQFSSLLIPSAIPLVMPFALIIAITQTLSTMNQD 69 Query: 84 TELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFS 143 +EL++I+ +G R +++P+L LA +S+ F+ N +EP R ++ + A A L Sbjct: 70 SELVVINASGAPRSAVMRPILILAATVSVTSFLIANYVEPYARINMRAMIANASADLMHV 129 Query: 144 YLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQA--I 201 ++E F +L D+LYI+I++ + ++ G+FI DS D IYYA G+I + Sbjct: 130 IIQEGTFRKLADNLYIQIAERRADGSIGGLFIADSCDPTLDLIYYAADGAIASTPSGDML 189 Query: 202 ILNDGEVHRKSPISKDISIMKFKSYT--LQTESANSSTIVLKANDQNLSFLLNPNPNNPN 259 ++ +GEV R++ +SI+KF SY L ++ V+ A D+ L++LLNP+ N+P Sbjct: 190 LMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAGDDFVIFAKDRPLTYLLNPDSNDPM 249 Query: 260 YRPELLETYRSEFHKRLTQWLFPVIFGLISI-VAADKRALVRQRKKIHPIFISLSISFGV 318 + L TY++E H+R TQW++P+IF +I++ +A D R+ + ++ F ++S + V Sbjct: 250 LQTRPL-TYKAELHRRFTQWIYPLIFAMIALAIAGDSRS--HREARVSASFSAISTALLV 306 Query: 319 FWGFSYIIHKIEQNPYYIPILY---LFLFCISSIFLLMIKK 356 +W + + +++P YI ++Y L +F ++ LL ++ Sbjct: 307 YWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFILLTGRR 347 >gi|260466946|ref|ZP_05813128.1| permease YjgP/YjgQ family protein [Mesorhizobium opportunistum WSM2075] gi|259029243|gb|EEW30537.1| permease YjgP/YjgQ family protein [Mesorhizobium opportunistum WSM2075] Length = 400 Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 111/366 (30%), Positives = 217/366 (59%), Gaps = 13/366 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E YI+R F+ + ++ + I W Q+L +I+LV+ S +S +++ ++P++ Sbjct: 1 MTVVERYIMRRAFVVFMAALVWTLAIVWTTQVLAKIDLVTDSGQSALTFFEVASLILPSI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + L+ MN ++EL +++ +G SR T+++P++ LA+ S+F F +N Sbjct: 61 IPIVVPFALVVAVAQTLSVMNSDSELAVVNASGASRWTIVRPIMLLALAASVFSFAVDNG 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I+P R + L A+++ L ++E F +++D L+++I + P+N L GIF+ DSR+ Sbjct: 121 IDPYARQKNRALVAESRSDLLSLIIQEGTFRKIEDGLFLQIGERLPDNKLGGIFVADSRE 180 Query: 181 TQTHKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANS 235 + +YYA++GSI ++R + +++NDG +HRK+ ++ D+S+++F SY + + + Sbjct: 181 EGVNLVYYAKTGSI-IERGGEKVLMMNDGVIHRKT-LTGDLSVIRFTSYAFDMSAFMSAA 238 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI-VAAD 294 + + L DQ +LLNP+ N+ NY+ E YR+E +R ++W + ++F LI++ VA D Sbjct: 239 NQVTLLPKDQTTQYLLNPSANDKNYQQNPQE-YRAEIDQRFSEWTYSMVFALIALAVAGD 297 Query: 295 KRALVRQRKKIHPIFISLSISFGVFW-GFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 R+ + +++P+ +++IS V W GF + K ++ P Y ++Y S++ + Sbjct: 298 ARS--HREARVNPLITAIAISLFVRWLGF-FAASKADEIPQYGYMVYGVPIVASAVAIWF 354 Query: 354 IKKKYT 359 I T Sbjct: 355 IVSNRT 360 >gi|319784423|ref|YP_004143899.1| permease YjgP/YjgQ family protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170311|gb|ADV13849.1| permease YjgP/YjgQ family protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 400 Score = 212 bits (540), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 113/366 (30%), Positives = 215/366 (58%), Gaps = 13/366 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R F+ + ++ + I W Q+L +I+LV+ S +S +++ ++P++ Sbjct: 1 MKVVERYIMRRAFVVFMAALVWTLAIVWTTQVLAKIDLVTDSGQSALTFFEVAALILPSI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + L+ MN ++EL +++ G SR T+++P++ LA+ ++F F +N Sbjct: 61 IPIVVPFALVVAVAQTLSVMNSDSELAVVNAAGASRWTIVRPIMLLALAAAVFSFAVDNG 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I+P R + L A ++ L ++E F ++DD L++++ + PNN L GIF+ DSR+ Sbjct: 121 IDPYARQKNRALVASSRADLLSLIIQEGTFRKIDDGLFLQVGERLPNNRLGGIFVADSRE 180 Query: 181 TQTHKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQ--TESANS 235 + +YYA++GSI ++R + +++NDG +HRK+ ++ D+S+++F SY A + Sbjct: 181 EGVNLVYYAKTGSI-IERGGEKVLMMNDGVIHRKT-LTGDLSVIRFTSYAFDMSAFMAAA 238 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI-VAAD 294 S + L DQ +LLNP+ N+ Y+ E YR+E ++R ++W + ++F LI++ VA D Sbjct: 239 SAVTLLPKDQTTQYLLNPSANDKYYQQSPYE-YRAEVNQRFSEWTYSMVFALIALAVAGD 297 Query: 295 KRALVRQRKKIHPIFISLSISFGVFW-GFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 R+ + +++P+ +++IS V W GF + K ++ P Y ++Y S++ + Sbjct: 298 ARS--HREARVNPLITAITISLFVRWLGF-FAASKADEIPQYAYMVYGVPIVASAVAIWF 354 Query: 354 IKKKYT 359 I T Sbjct: 355 IVSNRT 360 >gi|49475339|ref|YP_033380.1| hypothetical protein BH05450 [Bartonella henselae str. Houston-1] gi|49238145|emb|CAF27353.1| hypothetical protein BH05450 [Bartonella henselae str. Houston-1] Length = 396 Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 121/358 (33%), Positives = 206/358 (57%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYIL+ I F + + I+W +QIL RIN +++S ++L +L+ S L+P+V Sbjct: 1 MRIIELYILKRILILFSAVMIAAIGISWTVQILARINFLTTSKQTLLTILQFSISLVPSV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V PF + T+ L++MN+++EL II +G + T+ +P+L +A + S F N Sbjct: 61 IFLVIPFALLIAITSTLSAMNQDSELAIISASGFPKSTVWRPILLIAFVASCASFFIANF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ R ++Q+ A L ++ E F +L ++LYI+I + NP+ TL +FI D RD Sbjct: 121 VIPQARLNMRQMLATTHYDLINLFISEGSFQKLANNLYIEIGQRNPDGTLAHLFIADQRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 + YYA S+ ++ ++LN+GE+ R + + +SI++F SYT N Sbjct: 181 PKIDLFYYATKASVVSNKNGHFLVLNNGEIERINHQNDSVSIVQFSSYTFSLGEFIPNDK 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 T L D+ LS+L NPNP + Y+ + L+ YR+EFH+RLT+WL+P++F LI++ AA Sbjct: 241 TPTLYPKDRPLSYLRNPNPKDLYYQRKPLQ-YRAEFHRRLTEWLYPIVFSLIALAAAGDT 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RQ F +++ SF V+W + K + + Y+P+LY+ +S + M+ Sbjct: 300 RSYRQVGN-SANFSAIAFSFLVYWIGYFAAEKAKSDLAYVPLLYIIPIGVSILVFFML 356 >gi|319408320|emb|CBI81973.1| conserved membrane hypothetical protein [Bartonella schoenbuchensis R1] Length = 396 Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 117/365 (32%), Positives = 212/365 (58%), Gaps = 12/365 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYIL+ + F + + I+ +Q+L RI+ +++S ++ +L S L+P V Sbjct: 1 MRIIELYILKRVFILFSAVMVAAIGISLTVQVLARIDFLTTSGQTFLTVLYFSSLLVPPV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ PF + T +L++MN+++EL II +G S+ T++KP+L LAI + F N Sbjct: 61 ISLIIPFALVIAITTILSTMNQDSELAIISASGFSKNTVLKPILLLAIFTACTSFSIANF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ R ++Q+ A L ++ E F L ++LYI+I + P+ T+ +FI D RD Sbjct: 121 VAPQARLNMRQMLANTHSDLINLFIREGSFQALTNNLYIEIGERYPDGTIGRLFIADQRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 ++ +YYA+ G+I ++ ++LNDGE+ R + + +SI+KF SYT N+ Sbjct: 181 SKIDLLYYAKKGAIVSNKNGNFLVLNDGEIERVNYQNDSVSIIKFNSYTFSLSEFIPNNG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + D+ LS+LL+P+P +P Y+ L+ Y++EFH+RLT+WL+P++F LI++ AA Sbjct: 241 VPTIYPKDRPLSYLLHPDPYDPYYQRNPLQ-YKAEFHRRLTEWLYPIVFALIAVAAAGD- 298 Query: 297 ALVRQRKKIHPIFISLSISFG--VFWGFSYIIHKIEQNPYYIPILYLFLFCISSI--FLL 352 R ++ H I +I+F ++W + K + + Y+P+LY+ +S + F+L Sbjct: 299 --ARSHRQAHTSAIVFTITFSLLIYWIEYFFAEKTKNDLTYVPLLYITPIGVSVLIFFML 356 Query: 353 MIKKK 357 + +K Sbjct: 357 LTNRK 361 >gi|306842048|ref|ZP_07474721.1| permease YjgP/YjgQ family protein [Brucella sp. BO2] gi|306287889|gb|EFM59309.1| permease YjgP/YjgQ family protein [Brucella sp. BO2] Length = 371 Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 106/333 (31%), Positives = 198/333 (59%), Gaps = 11/333 (3%) Query: 32 ILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDN 91 +LQRIN +++S ++ +++ S LIP+ +P+V PF + T L++MN+++EL++I+ Sbjct: 1 MLQRINFLTTSGQTFQTIVQFSSLLIPSAIPLVMPFALIIAITQTLSTMNQDSELVVINA 60 Query: 92 TGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFF 151 +G R +++P+L LA +S+ F+ N +EP R ++ + A A L ++E F Sbjct: 61 SGAPRSAVMRPILILAATVSVTSFLIANYVEPYARINMRAMIANASADLMHVIIQEGTFR 120 Query: 152 RLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQA--IILNDGEVH 209 +L D+LYI++++ + ++ G+FI DSRD IYYA G+I +++ +GEV Sbjct: 121 KLADNLYIQVAERRADGSIGGLFIADSRDPTLDLIYYAADGAIASTPSGDMLLMENGEVQ 180 Query: 210 RKSPISKDISIMKFKSYT--LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLET 267 R++ +SI+KF SY L ++ V+ A D+ L++LLNP+PN+P + L T Sbjct: 181 RRNVSDGTVSIIKFDSYAFDLNQFASAGDDFVIFAKDRPLTYLLNPDPNDPMLQTRPL-T 239 Query: 268 YRSEFHKRLTQWLFPVIFGLISI-VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYII 326 YR+E H+R TQW++P+IF +I++ +A D R+ + ++ F ++S + V+W + Sbjct: 240 YRAELHRRFTQWIYPLIFAMIALAIAGDSRS--HREARVSASFSAISTALLVYWAGYFAS 297 Query: 327 HKIEQNPYYIPILY---LFLFCISSIFLLMIKK 356 + +++ YI ++Y L +F ++ LL ++ Sbjct: 298 DRADKDSSYILVMYLVPLVVFLVTGFILLTGRR 330 >gi|218459006|ref|ZP_03499097.1| putative permease protein [Rhizobium etli Kim 5] Length = 250 Score = 199 bits (505), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 95/241 (39%), Positives = 153/241 (63%), Gaps = 5/241 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YILR +G+ FL++ L ++ I W Q+LQRINLV+ S +S+ K++ ++P++ Sbjct: 11 MKLLETYILRRVGQMFLVALLPVLAIIWTTQVLQRINLVTDSGQSIGSFAKLATMILPSI 70 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T LT+MN ++EL +ID G R LI+P+L LA ++S+F F +NI Sbjct: 71 IPVVLPFALVIAITQTLTTMNNDSELTVIDAAGARRSILIRPILLLAAVISVFSFFVDNI 130 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP+ ++ +Q+ A+ L S +EE F +LD+ LY++IS+ L+G+F+ D RD Sbjct: 131 VEPRAKTVARQMIAETYADLLSSVIEEKTFRKLDEGLYVQISQRLAGRMLKGLFVADERD 190 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ----TESANSS 236 IYYA+ G++D +I++DGEVHRK+P ++S++ F SY+ TES + Sbjct: 191 PAYELIYYAKEGAVDDTGTTLIMHDGEVHRKTP-DGNVSVINFDSYSFDLSDMTESRGQA 249 Query: 237 T 237 T Sbjct: 250 T 250 >gi|110634108|ref|YP_674316.1| permease YjgP/YjgQ [Mesorhizobium sp. BNC1] gi|110285092|gb|ABG63151.1| permease YjgP/YjgQ [Chelativorans sp. BNC1] Length = 416 Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 116/345 (33%), Positives = 194/345 (56%), Gaps = 9/345 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YILR F S +++ I W Q+L R++LV+SS +S ++ +P+V Sbjct: 24 MKVIERYILRRTLAIFAASLAWLLVIVWTTQVLNRLDLVTSSGQSAATFFTVAFLTLPSV 83 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P++ PF + L +MN ++EL++I G+ R T+I P+L +AI+ SI F N Sbjct: 84 VPVIMPFVIGIAVAQTLATMNADSELVVISAAGSPRSTIIWPILIIAIIASIAAFAINNT 143 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R ++ + A A L + L E F ++ D ++++IS+ PN L GIF++DSRD Sbjct: 144 LEPYSRQKMRTILANANADLITTVLREGSFRKVVDGIFVQISERLPNGELGGIFVIDSRD 203 Query: 181 TQTHKIYYAQSGS-IDLDRQAI-ILNDGEVHRKSPISKDISIMKFKSYTLQ-TESANSST 237 Y A+ G+ + D I +L +GEV R+ + D+S+++F SY ++ N Sbjct: 204 PNLKLAYRAERGATVKRDGGNILVLLEGEVQRQV-ANGDVSVIRFDSYAFDLSQFTNGEG 262 Query: 238 I-VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI-VAADK 295 + L D+ LS LL P+PN+ + + +++R+E H R ++WL+P++F LI I VA D Sbjct: 263 VPTLFPKDRYLSELLEPDPND-KFFAKNPQSFRAELHTRFSEWLYPIVFALIGIAVAGDA 321 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY 340 R+ + ++HP+ +L+I V W Y ++ E P Y +LY Sbjct: 322 RSF--RETRLHPMVTTLTIGLLVRWAGFYASNEAETVPAYTYLLY 364 >gi|163759136|ref|ZP_02166222.1| hypothetical protein HPDFL43_05210 [Hoeflea phototrophica DFL-43] gi|162283540|gb|EDQ33825.1| hypothetical protein HPDFL43_05210 [Hoeflea phototrophica DFL-43] Length = 385 Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 92/347 (26%), Positives = 178/347 (51%), Gaps = 22/347 (6%) Query: 31 QILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIID 90 Q+L R+++++++ ++ + ++ +IP+V+ +V PF + + VL+ MN ++EL++I+ Sbjct: 20 QVLIRVDVLTTTGQAFGAFMLLAATIIPSVISVVAPFALLIGVSQVLSGMNSDSELVVIE 79 Query: 91 NTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLF 150 G T+++PV+ L++ LSI + + N +EP + + A+AQ L + F Sbjct: 80 AAGARPATVLRPVMALSVALSIMVLLVANFVEPWSNRKLYDVLAQAQSDLFSVAVRSGTF 139 Query: 151 FRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSI--DLDRQAIILNDGEV 208 +L+D LY+++++ P L GIF+ D+R T IYYA+SG I + D ++L DGE+ Sbjct: 140 MKLEDGLYVQVNEKLPGGALSGIFLSDTRTDGTEAIYYAKSGVIQPEGDTNILLLLDGEL 199 Query: 209 HRKSPISKDISIMKFKSYTLQTES--ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLE 266 ++ + ISI+ F SY L + + +Q+ +LL P P++ Y Sbjct: 200 QQRDTSNDQISIVTFSSYALDMAAFVPAGQNAARRPKEQSTGYLLAP-PSDDYYAGNAPY 258 Query: 267 TYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGF-SYI 325 + E +R + WL+P+ FGLI+ L + R H F + ++ G+ G + Sbjct: 259 IIKEELVQRFSTWLYPLAFGLIAFA-----FLGKARSNRHEQFQNGALVAGIALGARGFG 313 Query: 326 IHKIEQNP---------YYIPILYLFLFCISSI--FLLMIKKKYTKI 361 + +E+ Y +P + + LF ++ L I K + ++ Sbjct: 314 FYSVEEAGASSAMEVLSYLVPGMLIVLFGALAVTGHTLTIPKAWARL 360 >gi|220925665|ref|YP_002500967.1| permease YjgP/YjgQ family protein [Methylobacterium nodulans ORS 2060] gi|219950272|gb|ACL60664.1| permease YjgP/YjgQ family protein [Methylobacterium nodulans ORS 2060] Length = 388 Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 89/307 (28%), Positives = 154/307 (50%), Gaps = 5/307 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI R +FL + + WV Q L+ ++L+++ ++L I I+G IP + Sbjct: 1 MKQIERYIFRIALSAFLACLAGLTGVIWVTQALRELDLITAKGQTLLIFFLITGLSIPAL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L +V P M + L +N ++EL+++ G S L++P L LA+++ + + Sbjct: 61 LTIVAPVALFMAVLHALNRLNGDSELIVMSAAGMSPRHLMRPFLTLALIVGLAVAFLTIQ 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P ++ L + + + ++E F LD + + P TL GIF+ D R+ Sbjct: 121 VLPSSFQELRDLLTRVRGDFIANVVQEGQFTSLDSGITFHFRERGPGGTLLGIFMQDRRE 180 Query: 181 TQTHKIYYAQSG-SIDLDRQA-IILNDGEVHRKSPISKDISIMKFKSYT--LQTESANSS 236 +Y A+ G ++DLD Q ++L G +HR+ P S+D SI+ F Y L + + Sbjct: 181 AGRSVVYLAERGQAVDLDGQTYLVLEKGSIHRQQPNSRDASIITFARYAVDLAAFTPPDT 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V K +++ + LL P+PN +Y + +R+E H RLT WL+P+ LI+ A Sbjct: 241 DTVYKPRERSTAQLLFPDPNE-HYYKLVKGRFRAELHDRLTAWLYPLAMALIAFAALGDP 299 Query: 297 ALVRQRK 303 RQ + Sbjct: 300 RTTRQGR 306 >gi|170743203|ref|YP_001771858.1| permease YjgP/YjgQ family protein [Methylobacterium sp. 4-46] gi|168197477|gb|ACA19424.1| permease YjgP/YjgQ family protein [Methylobacterium sp. 4-46] Length = 388 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 89/307 (28%), Positives = 152/307 (49%), Gaps = 5/307 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI R +FL + + WV Q L+ ++LV++ +++ I I+G IP + Sbjct: 1 MKQIERYIFRIALGAFLACLAGLTGVIWVTQALRELDLVTAKGQTVLIFFLITGLSIPAL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L +V P M + L +N ++EL+++ G S L++P L LA+++S L Sbjct: 61 LTVVAPVALFMAVVHALNRLNGDSELIVMSAAGMSPRQLLRPFLTLALIVSAALGFLTIQ 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P ++ L + + + ++E F LD+ + + P L GIF+ D R+ Sbjct: 121 VLPSSFQELRDLLTRVRGDFIANVVQEGQFTSLDNGITFHFRESAPGGVLLGIFMQDRRE 180 Query: 181 TQTHKIYYAQSG-SIDLDRQA-IILNDGEVHRKSPISKDISIMKFKSYT--LQTESANSS 236 Y A+ G ++DLD Q ++L G +HR+ S+D SI+ F Y L + + Sbjct: 181 AGRSVTYLAERGQALDLDGQTYLVLEKGSIHRQQQNSRDASIISFARYAVDLAAFTPPDT 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V K +++ + LL P+PN +Y + +R+E H RLT WL+P+ LI+ A Sbjct: 241 DTVYKPRERSTAQLLFPDPNE-HYYKLVKGRFRAELHDRLTSWLYPLAMALIAFAALGDP 299 Query: 297 ALVRQRK 303 RQ + Sbjct: 300 RTTRQGR 306 >gi|328544011|ref|YP_004304120.1| permease YjgP/YjgQ [polymorphum gilvum SL003B-26A1] gi|326413755|gb|ADZ70818.1| Permease YjgP/YjgQ [Polymorphum gilvum SL003B-26A1] Length = 395 Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 80/293 (27%), Positives = 157/293 (53%), Gaps = 7/293 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ E YI+R G +F+M+ + + W Q L++++LV+S +++ + I+ +P + Sbjct: 1 MKTLERYIVRRAGIAFVMTLAAMTGVVWATQALRQLDLVTSKGQTIVQFVGITMLAMPFL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V PF + VL +++ ++EL++I+ +G SR +++PV+ + + + Sbjct: 61 VLVVAPFALMIALILVLNALSSDSELIVINASGGSRFLVLRPVVLFSAAIMLLSATLSLY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + ++ A+ ++ L + + F ++D L I + +L G+ + D RD Sbjct: 121 VAPLGLAQLRDEIARVRVDLVANIVRPGRFITVEDGLTFHIRNRRGDGSLDGLLLHDRRD 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 QT Y A G I DR +++ DG + R+ DISI++F+SY + +S Sbjct: 181 PQTVFTYQADVGRIVEAADRTLLLMQDGTIQRRPKTDGDISIVRFQSYAFDLSALIPETS 240 Query: 237 TIVLKANDQ-NLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 T + KA+++ L+ LL + + +Y + + R+E H RL+Q L+P+ FGLI Sbjct: 241 TPIYKASERPTLALLLGTHQD--DYARQNADRLRAELHDRLSQPLYPLAFGLI 291 >gi|170746990|ref|YP_001753250.1| permease YjgP/YjgQ family protein [Methylobacterium radiotolerans JCM 2831] gi|170653512|gb|ACB22567.1| permease YjgP/YjgQ family protein [Methylobacterium radiotolerans JCM 2831] Length = 386 Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 81/310 (26%), Positives = 161/310 (51%), Gaps = 7/310 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLF-IVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPT 59 M+ E YI R I ++CL + W+ Q L+ ++LV++ ++L + L ++G +PT Sbjct: 1 MRQIERYIFR-IALGATLACLIGLTGTIWLTQALRELDLVTAKGQTLLVFLFVTGLSLPT 59 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ ++ P + T L +N ++EL+++ G +L++P L LA+ +S + Sbjct: 60 LVVVIAPVALFIGTIYALNKLNGDSELIVMSAAGMPPRSLLRPFLTLALFVSFLVGFLVV 119 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 ++ P ++ + + + + ++E F +LD+ + + P TL+G+FI D R Sbjct: 120 VVMPASFQELRDVITRVRGDFIANVVKEGQFTQLDNGITFHFRERGPGGTLKGLFIQDRR 179 Query: 180 DTQTHKIYYAQSG-SIDLDRQA-IILNDGEVHRKSPISKDISIMKFKSYT--LQTESANS 235 + K+Y A+ G ++D+D Q+ +IL +G VH++ S+D SI+ F+ YT L + Sbjct: 180 EAGKTKVYLAERGNAVDVDGQSYLILENGSVHQQQRESRDSSILTFERYTIDLAAFAPPD 239 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 S + K +++ + LL P+ Y+ + +R+E H RL+ L+P+ I+ A Sbjct: 240 SDTIYKPRERSTAQLLFPDTTEGYYKLQ-KGRFRAELHDRLSACLYPLALVFIAFAALGD 298 Query: 296 RALVRQRKKI 305 RQ + + Sbjct: 299 PRTTRQGRGV 308 >gi|307946743|ref|ZP_07662078.1| permease YjgP/YjgQ family protein [Roseibium sp. TrichSKD4] gi|307770407|gb|EFO29633.1| permease YjgP/YjgQ family protein [Roseibium sp. TrichSKD4] Length = 395 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 86/310 (27%), Positives = 156/310 (50%), Gaps = 7/310 (2%) Query: 1 MKSFELYIL-RCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPT 59 MK+ E YI R IG F M+ + + W Q L++++LV+S +++ + I+ +P Sbjct: 1 MKTLERYIFKRAIG-VFFMAMAAMAGVVWSTQALRQLDLVTSKGQTIVQFIGITMLALPF 59 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 +L +V PF + VL +++ ++EL++ID TG SR ++KPVL ++ Sbjct: 60 LLVIVAPFALMIALVLVLNALSGDSELIVIDATGGSRFLVLKPVLIFTAAVTALTATLSI 119 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P +++ + + L + ++ F +D L I + N TL G+ + D R Sbjct: 120 YVAPLGLGELREEITRVRADLVANIVKPGHFINMDAGLTFHIRNRSGNGTLDGLLLHDVR 179 Query: 180 DTQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANS 235 D T Y + +G I DR +++ +G + RK + +ISI++F+SY + + Sbjct: 180 DKDTAFTYQSDTGHIVEVADRTLLVMQNGTIQRKPKGAGEISIVRFQSYAFDLSNLIPEA 239 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 S V KA++++ LLNP PN+ Y + + +E H+R +Q L+ + F L+ K Sbjct: 240 SEPVYKASERSTMNLLNPPPNDA-YALQHPDKLLAELHERFSQPLYCLAFALVVFAFLGK 298 Query: 296 RALVRQRKKI 305 RQ + I Sbjct: 299 ARTTRQGRGI 308 >gi|254473376|ref|ZP_05086773.1| permease YjgP/YjgQ [Pseudovibrio sp. JE062] gi|211957492|gb|EEA92695.1| permease YjgP/YjgQ [Pseudovibrio sp. JE062] Length = 415 Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 73/292 (25%), Positives = 160/292 (54%), Gaps = 5/292 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ E YI+R +F+++ + + W Q L++++LV+S ++L I+ +P + Sbjct: 19 MKTIERYIIRRSFTAFIVTLAAMTGVVWSTQALRQLDLVTSKGQTLLQFGYITALALPFL 78 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V PF + VL SM+R++EL++I+ +G S+ +++P++ ++ ++ ++ Sbjct: 79 ILIVAPFAMMLAFIIVLNSMSRDSELIVINASGASKWLVLRPIMTFSLCVTALMYFLSIY 138 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + ++ + ++ L + ++ F ++++L I + + L+G+ + D+RD Sbjct: 139 LSPTGLAELRSELTRVRVDLVANIIKPGRFIPIEENLTFHIRNRSGDGVLEGLLLDDARD 198 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 +T Y A++G I D+ +++ DG + R+ +D+SI+ F+SY S + Sbjct: 199 PETSFTYTAETGRIIEAADKTLLVMLDGTIQRRPKGGQDMSIVSFESYGFDLSSMIPEAR 258 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 KA+++ LL+ +P++ +Y + + EFH RL+ L+P+ FGLI Sbjct: 259 EPTFKASERPTFDLLSASPDD-SYAAKHWDKLIVEFHDRLSVPLYPIAFGLI 309 >gi|298291096|ref|YP_003693035.1| permease YjgP/YjgQ family protein [Starkeya novella DSM 506] gi|296927607|gb|ADH88416.1| permease YjgP/YjgQ family protein [Starkeya novella DSM 506] Length = 385 Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 85/353 (24%), Positives = 171/353 (48%), Gaps = 22/353 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+ R +FL + L + + W+ Q L+ ++++++ +++ + I+ +P + Sbjct: 1 MNRLDRYVFRSAASAFLGTLLVLTLMIWITQALRELDIMTTQGQTILAFVFITSLALPAL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P M L MN ++E+++ G S ++P++ LA++++ + Sbjct: 61 ILGLAPAALFMAVAYTLFRMNSDSEIVVSSAAGISTWRFLRPLVILALIVAACCSVLSLE 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + ++ + + + F L D + + + N N L GIFI D+RD Sbjct: 121 LVPAAMRQFRYEISRVRADVVAFIAQPGRFTTLADGMVFHVRERNANGVLGGIFINDARD 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYT--LQTESANSS 236 + Y A+ G + + D +IL +G +HR++P D ++++F+ Y L ++N Sbjct: 181 PKQTNTYLAERGQVVDNKDGTFLILEEGAIHRRTPGKPDSNVVEFQRYAFDLSPFTSNGE 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYR--SEFHKRLTQWLFPVIFGLISIVAAD 294 V +A +++ LLNP+P + Y +LE+ R E H+RL+ L+ + F I+ A Sbjct: 241 NAVYRAPERSFRELLNPDPKDYVY---ILESGRFTEELHRRLSLPLYVLAFFGIACAALA 297 Query: 295 KRALVRQRKKIH-----PIFISLSI-SFGVFWGFSYIIHKIEQNPYYIPILYL 341 + R+ + + P I L + SFG +I++I NP IP +YL Sbjct: 298 EPRTTREGRGLALAATTPFVIVLQVTSFG-------LINQIRGNPSVIPFVYL 343 >gi|118590094|ref|ZP_01547497.1| permease YjgP/YjgQ [Stappia aggregata IAM 12614] gi|118437066|gb|EAV43704.1| permease YjgP/YjgQ [Stappia aggregata IAM 12614] Length = 395 Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 77/307 (25%), Positives = 157/307 (51%), Gaps = 5/307 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ E YI+R +F ++ + + W Q L++++LV+S +++ + I+ +P + Sbjct: 1 MKTIERYIIRRTVYAFTLTIAAMTGVVWATQALRQLDLVTSKGQTIVQFIGITMLALPFL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V PF + VL S++ ++EL++ID +G SR ++KPV+ ++++ + Sbjct: 61 IVIVAPFALMIALILVLNSLSGDSELIVIDASGGSRFLVLKPVMLFSLVVMLLTASMSLY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + ++ + + L + ++ F ++D L I + TL G+ + D+RD Sbjct: 121 VAPAGLAQLRTEITRVRADLVANIVKPGRFITVEDGLTFHIRNRSGKGTLDGLLMHDTRD 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 +T Y A +G I DR +++ +G + R+ DISI++F+SY + + Sbjct: 181 PETAFTYQADTGQIVEAADRTLLVMQNGTIQRRPKQQGDISIVRFQSYAFDLSNLIPEAG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V KA++++ L++P ++ Y + + E H+R +Q L+ + FGLI K Sbjct: 241 EPVYKASERSTLNLMSPGRHD-EYALKNPDKLVQELHERFSQPLYCLAFGLIVFAFLGKA 299 Query: 297 ALVRQRK 303 RQ + Sbjct: 300 RTTRQGR 306 >gi|90419502|ref|ZP_01227412.1| possible permease [Aurantimonas manganoxydans SI85-9A1] gi|90336439|gb|EAS50180.1| possible permease [Aurantimonas manganoxydans SI85-9A1] Length = 392 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 90/353 (25%), Positives = 178/353 (50%), Gaps = 21/353 (5%) Query: 1 MKSFELYILRCIGRSFL---MSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLI 57 M E YI + R+F+ S +V I W++Q L RI++V +S + + + I+ L+ Sbjct: 1 MTILERYIFK---RAFVYAASSLTSLVLIVWIVQALSRIDVVKTSASAASNIFWIALMLL 57 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 P + V PF + L S+N ++E +I G S+ + +P++ L +L + + + Sbjct: 58 PDLFAGVLPFALLIGAIQALNSLNSDSERAVISAAGASQAVIARPIVALGLLGGLIMLLI 117 Query: 118 ENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD 177 N++ P S + + +L+ F ++ D + I I N T++ + I D Sbjct: 118 GNVVGPASMSAFQNGIRSINADMITLFLKPGRFEQVQDGIVISIGDVN-GATVESLVIAD 176 Query: 178 SRDTQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 +RD + Y+A+ I +D A ++L DG++HR++ +S+++F++Y + Sbjct: 177 TRDPASDLTYFAREAKI-IDEDASSLLLLFDGQLHRRNTADNSVSVIQFQTYAFDLAALR 235 Query: 235 SST--IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 +T ++A++++ + L+ P+PN+ Y+ E ++ E R+T WLF + F L +IV Sbjct: 236 PATDNSWVRASERSTAALIWPDPNDGLYQ-ERPHSFTEELTDRMTNWLFAIAFVLWAIVV 294 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVF---WGFSYIIHKIEQNPYYIPILYLF 342 A + + RQ P +++ + G+ GF + +IEQ +++ I YL Sbjct: 295 AGQPSTNRQ--GTGPA-MTVGLCGGLVLKAAGF-VTLSQIEQGVFWVVISYLL 343 >gi|240140389|ref|YP_002964868.1| putative permease [Methylobacterium extorquens AM1] gi|240010365|gb|ACS41591.1| putative permease [Methylobacterium extorquens AM1] Length = 389 Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 73/286 (25%), Positives = 140/286 (48%), Gaps = 5/286 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E YI R +FL + + WV Q L+ ++LV++ ++L + L I+ +PT+ Sbjct: 1 MTQIERYIFRIALGAFLTCLIGLTGTIWVTQALRELDLVTAKGQTLLVFLFITALSLPTL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + L +N ++EL+++ G L++P LA +S+ + Sbjct: 61 ITVIAPVALFIACVYALNKLNGDSELIVMSAAGMPPRQLLRPFATLAFAISVVVAFLTIQ 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P ++ + + + + L+E F LD+ + + + +LQG+FI D R+ Sbjct: 121 VMPSSFQELRDVLTRVRGDFVANVLKEGQFTALDNGITFHFRERGADGSLQGLFIQDKRE 180 Query: 181 TQTHKIYYAQSGSI-DLDRQA-IILNDGEVHRKSPISKDISIMKFKSYT--LQTESANSS 236 +Y A+ G + ++D Q ++L G +HR+ S+D SI+ ++ Y L + S Sbjct: 181 AGKAVVYLAERGRVSEVDGQTYLVLEKGSIHRQQKDSRDSSIVSYERYAVDLAAFTPPDS 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFP 282 V K +++ LL P+ YR + +R+E H RL+ WL+P Sbjct: 241 ETVYKPRERSTMALLFPDTGEGYYRLQ-KGRFRAELHDRLSAWLYP 285 >gi|254501938|ref|ZP_05114089.1| putative permease, YjgP/YjgQ family [Labrenzia alexandrii DFL-11] gi|222438009|gb|EEE44688.1| putative permease, YjgP/YjgQ family [Labrenzia alexandrii DFL-11] Length = 395 Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 74/292 (25%), Positives = 150/292 (51%), Gaps = 5/292 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + E YI+R +F ++ + + W Q L++++LV+S +++ + I+ +P + Sbjct: 1 MNTLERYIIRRTAYAFTLTLAAMTGVVWATQALRQLDLVTSKGQTIVQFIGITMLALPFL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V PF + VL S++ ++EL++ID +G SR ++KPVL A ++ + + Sbjct: 61 IVTVAPFALMIALILVLNSLSGDSELIVIDASGGSRFLVLKPVLAFATIIMLLVSALSLY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + ++ + + L + ++ F +++ L I + TL G+ + D+RD Sbjct: 121 VAPAGLAQLRTEITRVRADLVANIVKPGRFINVEEGLTFHIRNRSGKGTLDGLLMHDTRD 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 T Y A++G+I R +++ +G + R+ D+SI++F+SY + +S Sbjct: 181 PDTAFTYQAETGNIVEAAGRTLLVMQNGTIQRRPKQVGDMSIVRFQSYAFDLSNLIPEAS 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 V K ++++ + LL P P N + E R+E H+R + L+ + F LI Sbjct: 241 EPVFKPSERSTANLLGP-PGNDYFAVTHPERLRAEIHERFSLPLYCLSFALI 291 >gi|163853056|ref|YP_001641099.1| permease YjgP/YjgQ family protein [Methylobacterium extorquens PA1] gi|218531866|ref|YP_002422682.1| permease YjgP/YjgQ family protein [Methylobacterium chloromethanicum CM4] gi|254562993|ref|YP_003070088.1| permease [Methylobacterium extorquens DM4] gi|163664661|gb|ABY32028.1| permease YjgP/YjgQ family protein [Methylobacterium extorquens PA1] gi|218524169|gb|ACK84754.1| permease YjgP/YjgQ family protein [Methylobacterium chloromethanicum CM4] gi|254270271|emb|CAX26267.1| putative permease [Methylobacterium extorquens DM4] Length = 389 Score = 119 bits (299), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 72/286 (25%), Positives = 140/286 (48%), Gaps = 5/286 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E YI R +FL + + WV Q L+ ++LV++ ++L + L I+ +PT+ Sbjct: 1 MTQIERYIFRIALGAFLTCLIGLTGTIWVTQALRELDLVTAKGQTLLVFLFITALSLPTL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + L +N ++EL+++ G L++P LA +S+ + Sbjct: 61 ITVIAPVALFIACVYALNKLNGDSELIVMSAAGMPPRQLLRPFATLAFAISVVVAFLTIQ 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P ++ + + + + ++E F LD+ + + + +LQG+FI D R+ Sbjct: 121 VMPSSFQELRDVLTRVRGDFVANVVKEGQFTALDNGITFHFRERGADGSLQGLFIQDKRE 180 Query: 181 TQTHKIYYAQSGSI-DLDRQA-IILNDGEVHRKSPISKDISIMKFKSYT--LQTESANSS 236 +Y A+ G + ++D Q ++L G +HR+ S+D SI+ ++ Y L + S Sbjct: 181 AGKAVVYLAERGRVSEVDGQTYLVLEKGSIHRQQKDSRDSSIVSYERYAVDLAAFTPPDS 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFP 282 V K +++ LL P+ YR + +R+E H RL+ WL+P Sbjct: 241 ETVYKPRERSTMALLFPDTGEGYYRLQ-KGRFRAELHDRLSAWLYP 285 >gi|188583150|ref|YP_001926595.1| permease YjgP/YjgQ family protein [Methylobacterium populi BJ001] gi|179346648|gb|ACB82060.1| permease YjgP/YjgQ family protein [Methylobacterium populi BJ001] Length = 389 Score = 119 bits (299), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 71/286 (24%), Positives = 142/286 (49%), Gaps = 5/286 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E YI R +FL + + WV Q L+ ++LV++ ++L + L I+ +PT+ Sbjct: 1 MTQIERYIFRIALGAFLTCLIGLTGTIWVTQALRELDLVTAKGQTLLVFLFITALSLPTL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + L +N ++EL+++ G L++P + LA+ +S+ + Sbjct: 61 ITVIAPVALFIACVYALNKLNGDSELIVMSAAGMPPRQLLRPFVTLALAVSVVVAFLTIQ 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P ++ + + + + ++E F LD+ + + + +LQG+FI D R+ Sbjct: 121 VMPSSFQELRDVLTRVRGDFVANVVKEGQFTALDNGITFHFRERGADGSLQGLFIQDKRE 180 Query: 181 TQTHKIYYAQSGSI-DLDRQA-IILNDGEVHRKSPISKDISIMKFKSYT--LQTESANSS 236 +Y A+ G + ++D Q ++L G +HR+ S+D SI+ ++ Y L + + Sbjct: 181 AGKAVVYLAERGRVSEVDGQTYLVLEKGSIHRQQKDSRDSSIVSYERYAVDLAAFTPPDA 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFP 282 V K +++ LL P+ YR + +R+E H RL+ WL+P Sbjct: 241 ETVYKPRERSTLALLFPDTGEGYYRLQ-KGRFRAELHDRLSAWLYP 285 >gi|148255228|ref|YP_001239813.1| putative permease [Bradyrhizobium sp. BTAi1] gi|146407401|gb|ABQ35907.1| putative permease [Bradyrhizobium sp. BTAi1] Length = 389 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 86/360 (23%), Positives = 168/360 (46%), Gaps = 10/360 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M S + YI R SF + + + + W+ Q L+ I+L++S +++ L I+G +IP++ Sbjct: 1 MGSIDRYIFRTTLASFAVVLVSLTGVIWITQALRGIDLMTSQGQTILTFLGITGLVIPSL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + ++ L + ++E+++++ G S I L P + +++I + Sbjct: 61 LGVIAPIALMIAVSHTLNKLATDSEIIVMNAAGMSPIRLFVPFAYATCVVAILVTFIAAF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P IKQ A+ + + L+ F +LD +L I+I + P LQGI I D RD Sbjct: 121 FAPDGLRRIKQWDAEITADVLANILQPGRFAQLDQNLTIRIRERQPGGELQGILIDDRRD 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE--SANSS 236 + A+ G++ + D ++L DG + R ++ +++ F Y S Sbjct: 181 PKERITIIAEKGTVVKNPDGSFLVLEDGNLERFEVGKREPAMVAFARYAFDMSKFSNQGR 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L ++ L L+ P ++P Y+ ++ +R E H R ++P F ++ Sbjct: 241 DVTLGIRERYLWELMAPAEDDPIYK-QIPGQFRQELHDRFLAPIYPFAFAALTFAFLGAP 299 Query: 297 ALVRQRKKIHPIFISLSIS-FGV-FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RQ + F S ++ FGV GF+ + + + P + YL LF + + + +I Sbjct: 300 RTTRQSRNFS--FGSAILAVFGVRMAGFACSVMTV-KTPVAALVQYLMLFGVLGLSIWII 356 >gi|209885016|ref|YP_002288873.1| permease YjgP/YjgQ [Oligotropha carboxidovorans OM5] gi|209873212|gb|ACI93008.1| permease YjgP/YjgQ [Oligotropha carboxidovorans OM5] Length = 385 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 83/363 (22%), Positives = 170/363 (46%), Gaps = 13/363 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + S + Y++R SFL+ + + + WV Q L+ I+L+++ +++ + L I+G IP + Sbjct: 2 LGSIDAYVVRSTLLSFLIVLISLTGVIWVTQALRGIDLMTAQGQTVLVFLGITGLAIPVL 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + T+ L + ++E+++++ G S ++P ++ ++++ + Sbjct: 62 ALIIAPLAILLAVTHTLNRLATDSEIIVMNAAGLSPWRFLRPFMYSTVIVACLISFLAVF 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+C +++ + + + L+ F RL D L +++ + P L G+FI D R+ Sbjct: 122 LAPECLRALRRWHTEIGADVLANVLQPGQFIRL-DKLVLRVQERRPGGVLVGVFIDDQRN 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTE--SANSS 236 AQ+G + + ++L+DG + R KD I+ FKSY S Sbjct: 181 PAERINITAQNGVVQKTDKGSFLVLSDGNLQRFQADKKDPLIVAFKSYAFDMSQFSQAPQ 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 T A ++ +S L++P P + L +R+E H RL L+P +F +++ Sbjct: 241 TYNYNARERFISELISP-PKDDQVAQRSLGQFRAELHDRLLAGLYPFVFVILAFAFLGPP 299 Query: 297 ALVRQRKKIH---PIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 RQ + I + L + G G++ + Q P I + Y L ++++ M Sbjct: 300 RTTRQGRNFAISMLILVVLVVRIG---GYACSTIAVSQ-PAAIAVQYAMLLAVAALSGWM 355 Query: 354 IKK 356 I K Sbjct: 356 IVK 358 >gi|218679464|ref|ZP_03527361.1| putative permease protein [Rhizobium etli CIAT 894] Length = 138 Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 52/127 (40%), Positives = 86/127 (67%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YILR +G+ FL++ L ++ I W Q+LQRINLV+ S +S+ K++ ++P++ Sbjct: 11 MKLLETYILRRVGQMFLVALLPVLAIIWTTQVLQRINLVTDSGQSIGSFAKLATMILPSI 70 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T LT+MN ++EL +ID G R LI+P+L LA ++S+F F +N+ Sbjct: 71 IPVVLPFALVIAITQTLTTMNNDSELTVIDAAGARRSVLIRPILLLAAVVSVFSFFVDNV 130 Query: 121 IEPKCRS 127 +EP+ ++ Sbjct: 131 VEPRAKT 137 >gi|114704779|ref|ZP_01437687.1| hypothetical protein FP2506_07581 [Fulvimarina pelagi HTCC2506] gi|114539564|gb|EAU42684.1| hypothetical protein FP2506_07581 [Fulvimarina pelagi HTCC2506] Length = 398 Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 81/305 (26%), Positives = 142/305 (46%), Gaps = 6/305 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E YI R S + S + + I W++Q L RI++V +S + +L I+ L+P + Sbjct: 1 MTLLERYIFRRALISSVGSLVSLALIVWIVQALSRIDIVKTSASAAGNILWIALMLLPDL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 V PF + VL +N ++E +I +G S +++P+++L + I + + Sbjct: 61 AAGVVPFAILIGAIQVLNGLNADSERAVIAASGASMRVILRPIIYLGLAGGILVLTVAHG 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P S + +L F R+ DL I + + N + ++ +FI D+RD Sbjct: 121 IGPLASSAFYNGIRSINVDTITLFLRPGRFERVSPDLVISVGESN-GSIIESLFIQDTRD 179 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 Y+A SI D+ ++L DG++HRK +S+++F++Y + + Sbjct: 180 PNLDLTYFAAEASILDQGDQSVLMLFDGQLHRKPKTGNSVSVIEFQTYAFDLSNLRPADD 239 Query: 239 VLKANDQNLS--FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 LS L+ P+P++ Y+ + Y E R T WL+ V F L +IV A + Sbjct: 240 GDWTRTSELSTLTLIAPDPDDEIYQKK-PGRYVEEATDRFTSWLYCVAFALWAIVCAGQP 298 Query: 297 ALVRQ 301 RQ Sbjct: 299 QTNRQ 303 >gi|23008753|ref|ZP_00050063.1| COG0795: Predicted permeases [Magnetospirillum magnetotacticum MS-1] Length = 339 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 72/295 (24%), Positives = 144/295 (48%), Gaps = 9/295 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E YI R +FL + + WV Q L+ ++LV++ ++L + L I+G +PT+ Sbjct: 1 MTQIERYIFRIALGAFLTCLIGLTGTIWVTQALRELDLVTAKGQTLLVFLFITGLSLPTL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + L +N ++EL+++ G L++P + LA+ +S+ Sbjct: 61 ITVIAPVALFIACVYALNRLNGDSELIVMSAAGMPPRQLLRPFVTLALAISVVTAFLTIQ 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P ++ + + + + ++E F LD + + + +LQG+FI D R+ Sbjct: 121 VMPSSFQELRDVLTRVRGDFVANVVKEGQFTALDSGITFHFRERGADGSLQGLFIQDKRE 180 Query: 181 TQTHKIYYAQSGSI-DLDRQA-IILNDGEVHRKSPISKDISIMKFKSYT--LQTESANSS 236 +Y A+ G + ++D Q ++L G +HR+ S+D SI+ ++ Y L + S Sbjct: 181 AGKAVVYLAERGRVTEVDGQTYLVLEKGSIHRQQKDSRDSSIVSYERYAVDLAAFTPPDS 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYR--SEFHKRLTQWLFPVIFGLIS 289 V K +++ LL P+ Y +L+ R +E +RL+ W +P++ I+ Sbjct: 241 ETVYKPRERSTLALLFPDTREGYY---VLQKGRFWAELDERLSAWFYPLVLAFIA 292 >gi|146340304|ref|YP_001205352.1| putative permease [Bradyrhizobium sp. ORS278] gi|146193110|emb|CAL77121.1| putative permease [Bradyrhizobium sp. ORS278] Length = 389 Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 82/359 (22%), Positives = 170/359 (47%), Gaps = 8/359 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M S + YI R SF + + + + W+ Q L+ I+L++S +++ L I+G +IP++ Sbjct: 1 MGSIDRYIFRTTLASFALVLVSLTGVIWITQALRGIDLMTSQGQTILTFLGITGLVIPSL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + ++ L + ++E+++++ G S I L P + ++++ + + + Sbjct: 61 LGVIAPIALMIAVSHTLNKLATDSEIIVMNAAGMSPIRLFVPFAYATCVVALLVTLLASY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P IKQ A+ + + L+ F +LD +L I+I + P L+ I I D RD Sbjct: 121 IAPDGLRRIKQWDAEITADVLTNILQPGRFAQLDQNLTIRIGERQPGGELKNILIDDRRD 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE--SANSS 236 + A+ G++ + D ++L DG + R ++ +++ F Y S Sbjct: 181 PKERITIIAEKGTVVKNADGSFLVLEDGNLERFEIGKREPAMVAFARYAFDMSKFSNQGR 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L ++ + L+ P ++P Y+ ++ +R E H R ++P F ++ Sbjct: 241 DVTLGIRERYVWELMAPAEDDPIYK-QIPGQFRQELHDRFLAPIYPFAFAALTFAFLGAP 299 Query: 297 ALVRQRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RQ + L++ FGV GF+ + + + P I Y+ LF + ++ + +I Sbjct: 300 RTTRQSRNFSFGSAILAV-FGVRMAGFACSVMTV-KTPIAALIQYVMLFGVLALSIWII 356 >gi|75675869|ref|YP_318290.1| permease YjgP/YjgQ [Nitrobacter winogradskyi Nb-255] gi|74420739|gb|ABA04938.1| permease YjgP/YjgQ [Nitrobacter winogradskyi Nb-255] Length = 390 Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 82/359 (22%), Positives = 170/359 (47%), Gaps = 8/359 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M S + YI R SF++ + + + W+ Q L+ I+L++S +++ L I+ IP + Sbjct: 1 MGSIDKYIFRTTLASFVVVLVSLTGVIWITQALRGIDLMTSQGQTILTFLGITSLAIPVL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +++P + ++ L + ++E+++++ G S L +P L+ +++++ + Sbjct: 61 VLIISPIALMIAVSHTLHKLATDSEIIVMNAAGLSPFRLFRPFLYATVVVALLVAFIAAY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +KQ A+ + + L+ F +LD +L I+I + P L GIFI D R+ Sbjct: 121 LAPDGMRRLKQWDAEITADVLANVLQPGRFAQLDPNLTIRIRERQPGGQLAGIFIDDRRN 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTE--SANSS 236 + A G++ + Q +IL DG + R ++ +++ F Y S Sbjct: 181 SNERLSIIADHGTVMKNDQGSFLILEDGHLERFETGKREPAMVAFDRYAFDMSKFSNRGH 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 +V ++ L L+ P+ +P + +L +R+E H R T ++P F ++ Sbjct: 241 DVVYGIRERYLWELIAPDEKDPLVQ-QLRGQFRAELHDRFTAPIYPFAFAALTFAFLGSP 299 Query: 297 ALVRQRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RQ + + +++ FG+ GF+ + + ++P + YL LF I L +I Sbjct: 300 RTTRQSRNFS-MGAAIAAVFGLRMAGFALSVMTV-KSPMAALLQYLLLFGAIGISLRVI 356 >gi|300023217|ref|YP_003755828.1| permease YjgP/YjgQ family protein [Hyphomicrobium denitrificans ATCC 51888] gi|299525038|gb|ADJ23507.1| permease YjgP/YjgQ family protein [Hyphomicrobium denitrificans ATCC 51888] Length = 398 Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 80/345 (23%), Positives = 167/345 (48%), Gaps = 7/345 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ F Y+ R SF + + + I W+ L++ N+V+S + +L+K++ +P + Sbjct: 1 MRIFSKYVFRQAAGSFALIMVSLTGIVWIALALRQFNVVTSQGQDTWMLIKMTSLAVPNL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ PF F + + L +N ++EL++I +G T +P+L LA+L+SIFL + Sbjct: 61 MAVIAPFSFLIAALHTLNRLNTDSELIVISASGAKVWTAARPLLLLALLVSIFLAFVSHF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +P ++ + + L ++ F + L I + N L G+ + D+RD Sbjct: 121 AQPWSMRQLRDYMVQVRSDLLTQVIQPGRFTSPETGLMFHIRDRDANGELLGLVMHDTRD 180 Query: 181 TQTHKIYYAQSGS-IDLDRQA-IILNDGEVHRKSPISKDISIMKFKSYTLQT---ESANS 235 + Y A+ G+ + D A +++ G + R++ + I+ F Y + E + Sbjct: 181 KAQSQSYLAEHGTLVKQDGTAYLVMTVGHIIRRTDANGPPQIVAFDKYIVDLDRFEPQDG 240 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 LK ++ S L+NP+P + +Y+ + + +RSE H+R L+P+ F + I+A Sbjct: 241 GPGDLKPRERYFSELINPDPESSSYKNQPGQ-FRSELHERFVTPLYPLAFAFL-IIAFVG 298 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY 340 +A + ++ + ++ I+ I + + +NP + + Y Sbjct: 299 QAQSTRTSRMQSLVVTFVIAATCRLAGLAITNAMVRNPSMVAVAY 343 >gi|312113656|ref|YP_004011252.1| permease YjgP/YjgQ family protein [Rhodomicrobium vannielii ATCC 17100] gi|311218785|gb|ADP70153.1| permease YjgP/YjgQ family protein [Rhodomicrobium vannielii ATCC 17100] Length = 387 Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 67/289 (23%), Positives = 140/289 (48%), Gaps = 5/289 (1%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 YI R + +M + + I W+ +L+ I L+++ ++ + L+I+ IP+++ V P Sbjct: 6 YIFRQTASALIMILVSLTLIVWLTSLLREIKLLTAQGQTFLLFLQITALAIPSLIVTVAP 65 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 F + + L ++ ++EL+++ G+S L P LFLA+++S+ + + + P Sbjct: 66 VAFLIAALHSLNRLSGDSELIVLSAAGSSVWRLFSPYLFLAVVVSMCVLTANLFVLPNAA 125 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 + ++ + + ++ F L+ L + N L G+ + D RD + Sbjct: 126 RLLGDTVSQVRADVLSQVIQPGEFSDLEPGLTFHMRAKGDNGELLGVVVRDERDPKAVTT 185 Query: 187 YYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE--SANSSTIVLKA 242 A+ G I D R +++L+DG++ R+ ++ F SY SA K Sbjct: 186 VIAEQGQILQDGGRASMMLHDGQIIRQQAEKTAAQVVVFTSYAFDIGDFSAKKGPRERKP 245 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 ++++ LL P+ +P Y ++RSE H+R + L+P+ F +I+++ Sbjct: 246 RERDIGELLFPDKESPAYT-NTKGSFRSEIHERFSGALYPIAFAIIAVL 293 >gi|304392005|ref|ZP_07373947.1| permease YjgP/YjgQ family protein [Ahrensia sp. R2A130] gi|303296234|gb|EFL90592.1| permease YjgP/YjgQ family protein [Ahrensia sp. R2A130] Length = 402 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 65/274 (23%), Positives = 136/274 (49%), Gaps = 6/274 (2%) Query: 23 IVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNR 82 +V + WV++ +Q ++++ S + + L I+ +P+++ V P + ++++N Sbjct: 25 LVGVIWVVRAVQEVDVIMSKGQGIMTYLTITTLGVPSLIAAVAPLALMIGMVRTISALND 84 Query: 83 NTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTF 142 +E++++ +G SR +L +P L+LA L++I ++ P + +++ + L Sbjct: 85 ESEMVVMHASGASRWSLARPFLWLAGLMAIMIYFLSLYGGPHSLTKMRETVNTMRADLIS 144 Query: 143 SYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSID-LDRQA- 200 +++ F +L L I+ P L+G+FI D+RD H Y A SG+I + A Sbjct: 145 VVVKDGEFQQLGGGLMFHIATRLPGGELKGVFITDTRDENEHLTYLADSGTISKIGEDAY 204 Query: 201 IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN---LSFLLNPNPNN 257 ++L G+V R + + + S + F SY + + T K+ + S L +P+P + Sbjct: 205 LVLRQGQVQRTTVKTNNSSFIDFDSYAFNLSTFSGGTGDGKSRSRGELRTSELFSPDPAD 264 Query: 258 PNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 ++ +R EFH R T L+ + ++ +V Sbjct: 265 EMFK-RAPHRFRVEFHTRFTSGLYAFMVAIVILV 297 >gi|85716329|ref|ZP_01047302.1| permease YjgP/YjgQ [Nitrobacter sp. Nb-311A] gi|85696845|gb|EAQ34730.1| permease YjgP/YjgQ [Nitrobacter sp. Nb-311A] Length = 390 Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 65/293 (22%), Positives = 145/293 (49%), Gaps = 5/293 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M S + YI R SF++ + + + W+ Q L+ I+L++S +++ L I+ IP + Sbjct: 1 MGSIDRYIFRTTLASFVVVLVSLTGVIWITQALRGIDLMTSQGQTILTFLGITSLAIPVL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +++P + ++ L + ++E+++++ G S L +P ++ +++++ + Sbjct: 61 VLIISPIALMIAISHTLHKLATDSEIIVMNAAGLSPFRLFRPFIYATVIVALLVAFIAAY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +K+ A+ + + L+ F +LD +L I+I + P L GIFI D R+ Sbjct: 121 LAPDGMRRLKRWDAEITADVLANVLQPGRFAQLDPNLTIRIRERQPGGQLAGIFIDDRRN 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTE--SANSS 236 + A G++ + + ++L DG + R ++ +++ F Y S Sbjct: 181 SDERLSIIADHGTVMKNDKGSFLVLEDGHLERFETGKREPAMVAFDRYAFDMSKFSNRGH 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 +V ++ L L+ P+ N+P + +L +R+E H R T ++P +F ++ Sbjct: 241 DVVYGIRERYLWELIVPDQNDPVVQ-QLQGQFRAELHDRFTAPIYPFVFAALT 292 >gi|90423816|ref|YP_532186.1| permease YjgP/YjgQ [Rhodopseudomonas palustris BisB18] gi|90105830|gb|ABD87867.1| permease YjgP/YjgQ [Rhodopseudomonas palustris BisB18] Length = 388 Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 63/292 (21%), Positives = 144/292 (49%), Gaps = 4/292 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M S + YI R SF + + + W+ Q L+ I+L++S +++ L ++G +P + Sbjct: 1 MGSIDSYIFRTTLTSFAVILASLTGVIWITQALRGIDLMTSQGQTILTFLGLTGMAVPVL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + + L + ++E+++++ G S + L++P +F +++++I + Sbjct: 61 VLVIAPIALMIAVAHTLNRLANDSEIIVMNAAGLSPLRLVRPFMFASVVVAILVGFISAY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ I + ++ + + L+ F +L+ +L I++ + P L G+FI D RD Sbjct: 121 VAPEGLRRINRWDSEITADILANILQPGRFSQLETNLTIRVRERQPGGVLVGVFIDDRRD 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ-TESANSST 237 A G++ + D ++L DG + R +D +++ F Y ++ + + Sbjct: 181 PNERISIIADHGTVLKNNDGSFLVLEDGTLQRFESGKRDPALVAFGRYAFDMSKFSRARD 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 + ++ L LL P P++ Y L +R+E H R+ ++P +F ++ Sbjct: 241 VSYGIRERYLWELLWPEPDDALY-ARLPNQFRAEMHDRVLAPIYPFVFAALT 291 >gi|158425949|ref|YP_001527241.1| putative permease precursor [Azorhizobium caulinodans ORS 571] gi|158332838|dbj|BAF90323.1| putative permease precursor [Azorhizobium caulinodans ORS 571] Length = 387 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 84/354 (23%), Positives = 171/354 (48%), Gaps = 22/354 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI +F+ L + + W Q L++++LV+S +++ L I+ +PT+ Sbjct: 1 MGRLDRYIFSTSAVAFVGVTLVLTGMIWATQALRQLDLVTSQGQTILAFLAITSLTLPTL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFL-FISEN 119 + ++ P + T+ L +N ++E++++ G S +++ ++ LA+L S+F +S + Sbjct: 61 IMVIAPAALFIATSYTLLKLNGDSEIVVMAAAGMSPWRVLRSLMLLAVLASVFCSALSIH 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 I+ RS Q+S ++F + F L L + N + G+FI D+R Sbjct: 121 IVPASLRSFRDQVSRVRADVVSF-VAQPGRFVNLAPGLVFHVRDRAKNGVMSGVFINDAR 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAI--ILNDGEVHRKSP-ISKDISIMKFKSYTLQ----TES 232 + + Y A G I I +L +G +HR+ P + + S+++F+ Y T Sbjct: 180 EKEV-STYVADRGQIVEADNGIFLVLENGSIHRRVPGAASNGSVVEFQRYAFDLSALTPG 238 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + S ++ N+++ +++ NP ++P Y +R E+HKRL+ L+P+ F I+ A Sbjct: 239 GSQSGADIRPNERSFAYISNPPKDDP-YMIVQPGRFREEYHKRLSAGLYPLAFFAIAAAA 297 Query: 293 ADKRALVRQRK-----KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL 341 + R+ + I PI +L I+ F+ + ++ + +P +YL Sbjct: 298 MARPRTTRESRGLALAAIVPIMTALQIA-----NFA-VAGQLRTAAWAVPAIYL 345 >gi|154246777|ref|YP_001417735.1| permease YjgP/YjgQ family protein [Xanthobacter autotrophicus Py2] gi|154160862|gb|ABS68078.1| permease YjgP/YjgQ family protein [Xanthobacter autotrophicus Py2] Length = 405 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 73/308 (23%), Positives = 143/308 (46%), Gaps = 27/308 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI +FL + + + W Q L++++LV+S +++ + I+ +PT+ Sbjct: 1 MGRLDRYIFSTAAVAFLGVVVVLAGMIWATQALRQLDLVTSQGQTIIAFVAITSLTMPTL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + T L +N ++E++++ + G L++P++ LA+L+S F + Sbjct: 61 VLVIAPAALFIATAYTLLKLNGDSEIVVMASAGMGPWRLLRPLIILALLVSAFCALLAIK 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +T ++ K + + + F L L + + PN ++GIFI D+RD Sbjct: 121 VVPASLATFREQVTKVRADVVSFVAQPGRFVNLSQGLVFHVRERAPNGVMRGIFINDARD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAI--ILNDGEVHRKSPISKDI-------------------- 218 Y A G I I +L +G + R+ +K+ Sbjct: 181 DGVST-YLADRGQIIESDAGIFLVLENGSIQRRGGAAKEAEKDASEANKDAGKDKGKSSN 239 Query: 219 -SIMKFKSYT--LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKR 275 S+++F+ Y L + + NS +K ++ LS+++NP P + Y YR E HKR Sbjct: 240 SSVVEFQRYAFDLSSLAPNSQGQDVKPMERPLSYVMNP-PQDDLYVRFFPGRYREELHKR 298 Query: 276 LTQWLFPV 283 L+ L+P+ Sbjct: 299 LSAGLYPM 306 >gi|299135068|ref|ZP_07028259.1| permease YjgP/YjgQ family protein [Afipia sp. 1NLS2] gi|298590045|gb|EFI50249.1| permease YjgP/YjgQ family protein [Afipia sp. 1NLS2] Length = 381 Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 65/275 (23%), Positives = 134/275 (48%), Gaps = 6/275 (2%) Query: 15 SFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETT 74 SFL+ + + + WV Q L+ I+L+++ +++ + L I+G IP + ++ P + T Sbjct: 8 SFLIVLVSLTGVIWVTQALRGIDLMTAQGQTVLVFLGITGLAIPVLALIIAPLAMLLAVT 67 Query: 75 NVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSA 134 + L ++ ++E+++++ G S ++P + ++++ + + P+C +++ Sbjct: 68 HTLNRLSADSEVIVMNAAGLSPWRFLRPFMVSTVIVACLISFLAIFLAPECLRALRRWHT 127 Query: 135 KAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSI 194 + + + L+ F RL D L +++ + P L G+FI D R+ AQ+G + Sbjct: 128 EIGADVLANVLQPGQFIRL-DKLVLRVQERRPGGVLVGVFIDDQRNPAERINITAQNGVV 186 Query: 195 DLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTE--SANSSTIVLKANDQNLSFL 250 + ++L+DG + R KD I+ FKSY S T A ++ + L Sbjct: 187 QKTDKGSFLVLSDGNLQRFQADKKDPLIVAFKSYAFDMSQFSQAPQTYNYNARERFIGEL 246 Query: 251 LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIF 285 ++P P + L +R+E H RL L+P +F Sbjct: 247 ISP-PKDDAVAQRSLGQFRAELHDRLLAGLYPFVF 280 >gi|27379218|ref|NP_770747.1| permease [Bradyrhizobium japonicum USDA 110] gi|27352369|dbj|BAC49372.1| bll4107 [Bradyrhizobium japonicum USDA 110] Length = 389 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 77/359 (21%), Positives = 163/359 (45%), Gaps = 8/359 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M S + YI R SF + + + + W+ Q L+ I+L++S +++ L I+ ++P + Sbjct: 1 MGSIDRYIFRTTLASFALVLVSLTGVIWITQALRGIDLMTSQGQTILTFLGITSLVVPAL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +++P + ++ L + ++E+++++ G S L P + ++++ + Sbjct: 61 VLIISPIALMIAISHTLNKLATDSEIIVMNAAGFSPFRLFYPFFYATCVVALLVAFIAAY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P IKQ A+ + + L+ F +LD +L I+I + P L GIFI D RD Sbjct: 121 LAPDGMRRIKQWDAEITADVLTNILQPGRFAQLDKNLTIRIRERLPGGILAGIFIDDRRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTE--SANSS 236 A+ G + + ++L G + R +D +++ F Y S Sbjct: 181 PNERVSIVAEHGEVMKNDTGSFLVLETGNLQRFEVGKRDPALVAFGRYGFDMSKFSGQGR 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L ++ L L +P+ ++P Y+ ++ +RS H L ++P F +++ Sbjct: 241 DVTLGIRERYLWELFSPSEDDPVYK-QIPGQFRSALHDSLLAPIYPFAFAVLTFAFLGAP 299 Query: 297 ALVRQRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RQ + I S+ FG+ GF+ + + ++P + + Y + + + MI Sbjct: 300 RTTRQSRNFS-IGSSIVAVFGLRMAGFACSVMAV-KSPAAVLVQYAMVLGAIGVGMWMI 356 >gi|92117863|ref|YP_577592.1| permease YjgP/YjgQ [Nitrobacter hamburgensis X14] gi|91800757|gb|ABE63132.1| permease YjgP/YjgQ [Nitrobacter hamburgensis X14] Length = 389 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 77/359 (21%), Positives = 170/359 (47%), Gaps = 8/359 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M S + YI R SF++ + + + W+ Q L+ I+L++S +++ L I+ IP + Sbjct: 1 MGSIDKYIFRTTLASFVVVLVSLTGVIWITQALRGIDLMTSQGQTILTFLGITSLAIPVL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +++P + ++ L + ++E+++++ G S L +P ++ +++++ + Sbjct: 61 VLIISPIALMIAISHTLHKLATDSEIIVMNAAGLSPFRLFRPFIYATVVVALLVAFIAAY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +K+ A+ + + L+ F +LD +L I++ + P L GIFI D R+ Sbjct: 121 LAPDGMRRLKRWDAEITADVLANVLQPGRFAQLDPNLTIRVRERQPGGLLVGIFIDDRRN 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFK--SYTLQTESANSS 236 A G++ + +IL DG + R ++ +++ F+ ++ + S Sbjct: 181 PNERLSIVADHGTVMKNDNGSFLILEDGHLERLEAGKREPNMVAFRRNAFDMSKFSNRGH 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 +V ++ L L+ P P +P + +L +R+E H R T ++P F ++ Sbjct: 241 DVVYGIRERYLWELIAPEPTDPLVQ-QLPGQFRAELHDRFTAPIYPFAFAALTFAFLGTP 299 Query: 297 ALVRQRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RQ + + ++ FG+ GF+ + + ++P + YL LF + L +I Sbjct: 300 RTTRQSRNFS-MGAAIVTVFGLRMAGFALSVMAV-KSPTAPLLQYLLLFAAIGVSLRVI 356 >gi|86749600|ref|YP_486096.1| permease YjgP/YjgQ [Rhodopseudomonas palustris HaA2] gi|86572628|gb|ABD07185.1| permease YjgP/YjgQ [Rhodopseudomonas palustris HaA2] Length = 388 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 62/285 (21%), Positives = 136/285 (47%), Gaps = 4/285 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M S + YI R SF + + + W+ Q L+ I+L++S +++ L ++G +P + Sbjct: 1 MGSIDSYIFRTTLTSFAVVMASLTGVIWITQALRGIDLMTSQGQTIVTFLGLTGLAVPVL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + + L + ++E+++++ G S + L +P ++ I ++ + + + Sbjct: 61 ILVIAPIALMIAVAHTLNRLATDSEIIVMNAAGLSPLRLFRPFVYATIFVAALVTLIGSY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P I + A+ + + L+ F +L+ +L I++ + L G+FI D RD Sbjct: 121 IAPDGLRRIARWDAEITADVLANVLQPGRFAQLEQNLTIRVRERQAGGLLVGVFIDDRRD 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ-TESANSST 237 A G++ + D ++L DG + R ++ +++ F Y ++ + + Sbjct: 181 PADRVSIIADHGTVLKNKDGSFLVLEDGHLERFQGGKQEPTLVAFSRYAFDMSKFSRARD 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFP 282 + + L L+ P+P +P +L +RSE H RL ++P Sbjct: 241 VAYGIREHYLWELIWPDPKDP-LLAQLPTQFRSEMHDRLLAPIYP 284 >gi|39936124|ref|NP_948400.1| permease YjgP/YjgQ [Rhodopseudomonas palustris CGA009] gi|192291842|ref|YP_001992447.1| permease YjgP/YjgQ family protein [Rhodopseudomonas palustris TIE-1] gi|39649978|emb|CAE28502.1| possible permease [Rhodopseudomonas palustris CGA009] gi|192285591|gb|ACF01972.1| permease YjgP/YjgQ family protein [Rhodopseudomonas palustris TIE-1] Length = 388 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 77/362 (21%), Positives = 161/362 (44%), Gaps = 11/362 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M S + YI R SF + + + W+ Q L+ I+L++S +++ L ++G +P + Sbjct: 1 MGSIDRYIFRTTLVSFAVVMGSLTGVIWITQALRGIDLMTSQGQTIITFLGLTGLAVPVL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + + L + ++E+++++ G S I L +P + ++++ + I Sbjct: 61 VLVIAPIALMIAVAHTLNRLATDSEIIVMNAAGLSPIRLFRPFFYATMVVAALVIIIGAY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P I + ++ + + L+ F +L+ L I++ + P L G+FI D+R Sbjct: 121 IAPDGLRRIARWDSEITADVLANVLQPGRFAQLEQGLTIRVRERQPGGLLVGVFIDDARA 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQ-TESANSST 237 A G++ + + ++L DG + R ++ +++ F Y ++ + + Sbjct: 181 PNERVSIIADHGTVVKNDKGSFLVLEDGHLERFQTGKQEPALVAFSRYAFDMSKFSRARD 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L LL P N+P L +RSE H RL ++P F ++ Sbjct: 241 VAYGIRERYLWELLWPAENDP-LLARLPTEFRSEMHDRLLAPIYPFFFAAVAFAFLGLAR 299 Query: 298 LVRQRKK---IHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RQ + + ++ + F S I +K PY + YL LF + L +I Sbjct: 300 TTRQSRNFSMAGAVLVAFVVRLAGF-ALSVIANK---TPYVAGLQYLLLFVATGTCLWLI 355 Query: 355 KK 356 + Sbjct: 356 NR 357 >gi|115525294|ref|YP_782205.1| permease YjgP/YjgQ [Rhodopseudomonas palustris BisA53] gi|115519241|gb|ABJ07225.1| permease YjgP/YjgQ family protein [Rhodopseudomonas palustris BisA53] Length = 388 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 71/346 (20%), Positives = 157/346 (45%), Gaps = 5/346 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M S + YI R SF + + + W+ Q L+ I+L++S +++ L ++ +P + Sbjct: 1 MGSTDSYIFRTTLASFAVILASLTGVIWITQALRGIDLMTSQGQTILTFLGLTSMAVPVL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + + L + ++E+++++ G S + L++P ++ A ++++ + Sbjct: 61 ILVIAPLALMIAVAHTLNRLATDSEIIVMNAAGLSPLRLMRPFMYAAAVVALLVGFIGAY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ I ++ + + L+ F +L+ +L I++ + P L G+FI D RD Sbjct: 121 VAPEGLRRINNWDSEITADILANILQPGRFAQLEQNLTIRVRERQPGGLLVGVFIDDRRD 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ-TESANSST 237 + A G++ + D ++L DG + R +D +++ F Y ++ + + Sbjct: 181 PKERVSIIADHGTVLKNADGSFLVLEDGTLQRFELGKRDPALVAFGRYAFDMSKFSKARD 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L L+ P P +P L +R+E H RL ++P F ++ Sbjct: 241 VTYGIRERYLWELIWPQPGDP-LVARLPNQFRAEMHDRLMAPIYPFAFAALTFAFLGMPR 299 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 RQ + ++ GF+ I NP++ + YL L Sbjct: 300 TTRQSRNFSVAGAIAAVFLLRLAGFACSIMT-NTNPWFAALQYLLL 344 >gi|91977434|ref|YP_570093.1| permease YjgP/YjgQ [Rhodopseudomonas palustris BisB5] gi|91683890|gb|ABE40192.1| permease YjgP/YjgQ [Rhodopseudomonas palustris BisB5] Length = 388 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 74/360 (20%), Positives = 165/360 (45%), Gaps = 7/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + + YI R SF + + + W+ Q L+ I+L++S +++ L ++G +P + Sbjct: 1 MGAIDSYIFRTTLTSFAVVMASLTGVIWITQALRGIDLMTSQGQTIVTFLGLTGLAVPVL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + + L + ++E+++++ G S I L +P ++ I +++ + + Sbjct: 61 ILVIAPIALMIAVAHTLNRLATDSEIIVMNAAGLSPIRLFRPFVYATIAVAVLVTLIGAY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P I + ++ + + L+ F +L+ +L I++ + L G+FI D RD Sbjct: 121 IAPDGLRRIARWDSEITADVLANVLQPGRFAQLEQNLTIRVRERQAGGLLVGVFIDDRRD 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ-TESANSST 237 A G++ + D ++L DG + R ++ +++ F Y ++ + + Sbjct: 181 PNDRVSIIADHGTVVKNSDGSFLVLEDGHLERFQAGKQEPALVAFSRYAFDMSKFSRARD 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + L L+ P+P +P ++ +R+E H RL ++P F ++ Sbjct: 241 VTYGIREHYLWELIWPDPKDP-LLAQVPTQFRAEMHDRLLAPIYPFFFAAVTFAFLGMPR 299 Query: 298 LVRQRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 RQ + + +++ +F V GF+ + PY I YL L + L +I++ Sbjct: 300 TTRQSRNFSMVG-AVACAFVVRLAGFALSVVA-NHTPYIAGIQYLLLAVAIGVSLWLIRR 357 >gi|316933708|ref|YP_004108690.1| permease YjgP/YjgQ family protein [Rhodopseudomonas palustris DX-1] gi|315601422|gb|ADU43957.1| permease YjgP/YjgQ family protein [Rhodopseudomonas palustris DX-1] Length = 388 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 78/362 (21%), Positives = 164/362 (45%), Gaps = 11/362 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M S + YI R SF + + + W+ Q L+ I+L++S +++ L ++G +P + Sbjct: 1 MGSIDRYIFRTTLVSFAVVMGSLTGVIWITQALRGIDLMTSQGQTIITFLGLTGLAVPVL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + + L + ++E+++++ G S I L +P + ++++ + + Sbjct: 61 VLVIAPIALMIAVAHTLNRLAVDSEIIVMNAAGLSPIRLFRPFFYATMVVAALVTVIGAY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P I + ++ + + L+ F +L+ L I++ + P L G+FI D+RD Sbjct: 121 IAPDGLRRIARWDSEITADVLANVLQPGRFAQLEPGLTIRVRERQPGGILVGVFIDDARD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQ-TESANSST 237 A G++ + + ++L DG + R ++ +++ F Y ++ + + Sbjct: 181 PNERISIIADHGTVLKNEKGSFLVLEDGHLERFQAGKQEPTLVAFSRYAFDMSKFSRARD 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L LL P ++P L +RSE H RL ++P F ++ Sbjct: 241 VSYGIRERYLWELLFPPADDP-LLARLPTEFRSEMHDRLLAPIYPFFFATVAFAFLGLPR 299 Query: 298 LVRQRKK---IHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RQ + I + ++ + F S I +K PY + YL L +I L +I Sbjct: 300 TTRQSRNFSMIGAVLVAFVVRLAGF-ALSVIANK---TPYVAGLQYLLLAVAIAICLWLI 355 Query: 355 KK 356 K+ Sbjct: 356 KR 357 >gi|304321348|ref|YP_003854991.1| putative permease [Parvularcula bermudensis HTCC2503] gi|303300250|gb|ADM09849.1| putative permease [Parvularcula bermudensis HTCC2503] Length = 426 Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 69/283 (24%), Positives = 133/283 (46%), Gaps = 7/283 (2%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + + FL+ + W Q+LQR++L+ SL L+++ LIP+++ + Sbjct: 49 LDRYIFKQVAVPFLLILACTTAVIWFTQMLQRVDLMVEDGGSLLSFLRVTVLLIPSLVGV 108 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIF-LFISENIIE 122 + PF L ++EL + G SR+ L +PVL L+IL ++ L+I+ + ++ Sbjct: 109 ILPFAVFAAVLYALNLFVTDSELPAMRAAGASRLRLARPVLVLSILAALVSLYINAD-LQ 167 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 PK ++Q + + S + E +F + + + + P G+FI DS D + Sbjct: 168 PKTYRQLRQTVEDVRSDIAQSLIREGVFVQPTAQITVFAQEVRPGGQFIGLFINDSSDPR 227 Query: 183 THKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKF--KSYTLQTESANSSTI 238 K Y A+ G + ++L +G V + + + + ++ + L S Sbjct: 228 ETKTYTAERGLFQMAETGPKLLLIEGTVQYRDRETGRVDVFRYIETAVDLAAFDRGSGGR 287 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLF 281 L ++ +S LLNP+ ++P+ L + YR+ H RL L+ Sbjct: 288 SLDETERTVSQLLNPDLSDPSI-ARLADRYRAAGHARLATPLY 329 >gi|296532233|ref|ZP_06894980.1| permease YjgP/YjgQ [Roseomonas cervicalis ATCC 49957] gi|296267440|gb|EFH13318.1| permease YjgP/YjgQ [Roseomonas cervicalis ATCC 49957] Length = 381 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 83/374 (22%), Positives = 164/374 (43%), Gaps = 16/374 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+ R +G L + + + W+ Q L+ I LV SL + ++++G L+P+ Sbjct: 1 MTRLDRYLFRQLGIGLLAVTIGLAALVWLTQSLRFIELVLDRGLSLAVFVELTGLLLPSF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + T +N + EL+++ G S L +P L +A L + F + Sbjct: 61 FAVILPITTFVVTLFSYVRLNGDRELVVMRAAGLSDWQLSRPALLIATLATGFCLFLQLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + + + L+E +F L DDL + + + TL+GI + D R+ Sbjct: 121 LVPVSHAAFRSWQFEIRNEMAAILLQEGVFSSLGDDLTVYARRREADGTLRGILVHDMRE 180 Query: 181 TQTHKIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKD----ISIMKFKSYTLQTESA 233 T AQ G S + I+LN G+ + P + +S++ F ++ S+ Sbjct: 181 PGTPVTIMAQEGRLVSTPAGPRVILLN-GQREQLEPATATHPARLSVLSFAENSVDLASS 239 Query: 234 NSSTI-VLKANDQNLSF---LLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 + S + V + D F LLNP+P N + +R+E H+RL + ++ Sbjct: 240 SRSPVDVARNRDSRERFVPELLNPDPAE-NLPERDIRKFRAEGHQRLASPFTALSMAMVG 298 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF--CIS 347 + A R+ P I +++ + I + ++ YIP+++L + Sbjct: 299 LAVALASGF-RRHGDWRPAAIGVALVVALLALGLAIGNLAARDNRYIPLIWLHTLGPVLG 357 Query: 348 SIFLLMIKKKYTKI 361 + ++L + + KI Sbjct: 358 AAWVLSGRPGWPKI 371 >gi|114328863|ref|YP_746020.1| hypothetical protein GbCGDNIH1_2199 [Granulibacter bethesdensis CGDNIH1] gi|114317037|gb|ABI63097.1| hypothetical membrane spanning protein [Granulibacter bethesdensis CGDNIH1] Length = 400 Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 75/313 (23%), Positives = 147/313 (46%), Gaps = 10/313 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + + Y++R + + + +V + W+ Q L+ I LV + S+ + LK++G LIP+ Sbjct: 18 LTTLDRYVMRQLLVALVACTCGLVALIWLTQSLRFIELVVNRGLSVFVFLKLTGLLIPSF 77 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + V + + EL ++ G S + +P L +A+L + F+ Sbjct: 78 VAVIIPITTYVVVQFVYQRLAGDRELTVMRAAGLSSWVMARPALLVALLTMLLSFVLNLW 137 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P S ++ + + + L++ +F + DD+ + I K + + TL GI I D+R Sbjct: 138 IVPAAFSAFREYQWEIRNKMAAFLLQDGVFTPVSDDMIVYIRKRDADGTLHGILIDDARK 197 Query: 181 TQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTE-SANSS 236 +H AQ G ++ ++L G + ++I+ F T+ E S Sbjct: 198 ADSHATIIAQRGRMEQGSNGAPQVVLESGSRQELDRHTGRLNILTFNENTISLEQSGKDE 257 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYR--PELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 AN+ +L+ LL+P+P+ R P+L R E H+RL+ L + F ++++V+ Sbjct: 258 QRSRDANEMSLTELLHPDPSQVMARDIPKL----RVEAHRRLSGPLNVLSFAVVALVSVL 313 Query: 295 KRALVRQRKKIHP 307 A R + P Sbjct: 314 NGAFRRHGGLLRP 326 >gi|218661972|ref|ZP_03517902.1| putative permease protein [Rhizobium etli IE4771] Length = 115 Score = 91.7 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 44/105 (41%), Positives = 69/105 (65%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YILR +G+ FL++ L ++ I W Q+LQRINLV+ S +S+ K++ ++P++ Sbjct: 11 MKLLETYILRGVGQMFLVALLPVLAIIWTTQVLQRINLVTDSGQSIGSFAKLATMILPSI 70 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLF 105 +P+V PF + T LT+MN ++EL +ID G R LI+P+L Sbjct: 71 IPVVLPFALVIAITQTLTTMNNDSELTVIDAAGARRSILIRPILL 115 >gi|260576761|ref|ZP_05844746.1| permease YjgP/YjgQ family protein [Rhodobacter sp. SW2] gi|259021013|gb|EEW24324.1| permease YjgP/YjgQ family protein [Rhodobacter sp. SW2] Length = 376 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 66/296 (22%), Positives = 133/296 (44%), Gaps = 4/296 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y+L + F L +V + W+ + + + + +S + L+ S +P+V Sbjct: 1 MSRFDRYLLSQLLALFGFFSLVLVAVYWINRAVLLFDKLIGDGQSALVFLEFSLLTLPSV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V PF + T + + R++EL+++ TG S + L +PV ++++ + + ++ Sbjct: 61 IMLVLPFSAFVATVYGINRLTRDSELVVMQATGFSPLRLARPVAIFGLIVAAMMAVLLHV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ R+T+ Q + + L +L + F + + I + +P L+ +F+ D+R Sbjct: 121 LVPESRATLAQRTLEVSENLAARFLMDGQFMHPAKGITLYIREISPKGELRDVFLADTRS 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 +H Y A + +++ DG V + +S+ +F +T + + Sbjct: 181 PTSHATYTASRALLVKGDSGPKLVMLDGMVQNLNNKEGRMSVTRFADFTYDLATLIAGPK 240 Query: 239 VLKANDQNLSF--LLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 VLK N LS LL P+ E E + H RL Q + + LI A Sbjct: 241 VLKRNASALSTYDLLWPSAEILQETAETPEALWFQAHNRLAQPILGLAAALIGFSA 296 >gi|329114150|ref|ZP_08242912.1| Hypothetical protein APO_0930 [Acetobacter pomorum DM001] gi|326696226|gb|EGE47905.1| Hypothetical protein APO_0930 [Acetobacter pomorum DM001] Length = 401 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 70/315 (22%), Positives = 141/315 (44%), Gaps = 5/315 (1%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + + Y+ + + L + + + W++Q L+ ++LV SL + ++++ LIP+ + Sbjct: 33 TLDRYVFHQLLVALLATTGGLAALIWLMQSLRFVSLVVDRGLSLRVFIELTSLLIPSFVA 92 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + + V + + EL ++ G S+ L K L A++ +I F+ I Sbjct: 93 VVLPITTFVVSLFVYQRLAGDRELTVMQAAGLSQFALAKAGLGCALMATIMGFLLNLWIV 152 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +Q + + L+E +F ++ D + + I + + TL GI + D R Sbjct: 153 PTSYHAFRQYEFDIRNKMAAFMLQEGVFTKVSDAMTVYIRSRSHDGTLHGIMVEDDRQPG 212 Query: 183 THKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 A GS+ + D +IL DG + ++++ FK ++ SA+ Sbjct: 213 NQATILANHGSMMIVNDTPRVILYDGSRQVIDHKTGRLNMLVFKQDSMDLSSAHQEDARF 272 Query: 241 K-ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + A + +L LL+P+P + R ++ E +RLT L F ++ +VA + A Sbjct: 273 RDAAEMSLGELLHPDPQQVSVRDT--GKFKVEGWRRLTSPLTCFSFAMVGLVAVLRGAFS 330 Query: 300 RQRKKIHPIFISLSI 314 R P+ L++ Sbjct: 331 RYGNIKRPLAAVLTV 345 >gi|254294286|ref|YP_003060309.1| permease YjgP/YjgQ family protein [Hirschia baltica ATCC 49814] gi|254042817|gb|ACT59612.1| permease YjgP/YjgQ family protein [Hirschia baltica ATCC 49814] Length = 385 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 81/351 (23%), Positives = 158/351 (45%), Gaps = 17/351 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y+ + R+ + +V IA + Q L +I+L+ + +S L +S P V Sbjct: 1 MDRFQQYLFGNVLRTMVSIVGGLVLIALLTQGLTQIDLIVENRQSAFTFLYVSMLAAPQV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + L +R++E+++ G SR+ + PVL +A + ++ Sbjct: 61 IGLLLPIALFVAAIATLNRAHRDSEIVVAQAAGMSRLQIASPVLRIAAIAALLHLCINLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 ++P +++ A+ L + ++ F +L + I K L+ + I D+RD Sbjct: 121 VQPASYREMRETLTSARTDLAATLVKPGEFNSPAHNLTVYIGKSLGGGELRTLLISDARD 180 Query: 181 TQTHKIYYAQSGSIDLDRQ--AIILNDGEVHRKSPISK--DISIMKFKSYTLQTESANSS 236 + Y A++G++ AI++ + V + + D + ++ Y L + + Sbjct: 181 PDANTTYIARTGAVTEVEGVPAILMRNARVQKIDGNGQLWDGTFDQYI-YELAAFVDSDT 239 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + VLKA+D+ L LL P+ NN Y + E + +E H RL L + ++++VA Sbjct: 240 SYVLKASDRFLHELLYPDFNN-FYDRDNAEKFYAEGHSRLALPLMNMFMAMLAVVAVLGG 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYI--IHKIEQNP------YYIPIL 339 R+ + IS++ G+F + + E NP Y IPIL Sbjct: 299 DFSRRGYQTR---ISVATGIGLFAQLLALASVSVGEDNPKLNFIQYLIPIL 346 >gi|258542097|ref|YP_003187530.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-01] gi|256633175|dbj|BAH99150.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-01] gi|256636232|dbj|BAI02201.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-03] gi|256639287|dbj|BAI05249.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-07] gi|256642341|dbj|BAI08296.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-22] gi|256645396|dbj|BAI11344.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-26] gi|256648451|dbj|BAI14392.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-32] gi|256651504|dbj|BAI17438.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654495|dbj|BAI20422.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-12] Length = 401 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 69/315 (21%), Positives = 141/315 (44%), Gaps = 5/315 (1%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + + Y+ + + L + + + W++Q L+ ++LV SL + ++++ LIP+ + Sbjct: 33 TLDRYVFHQLLVALLATTGGLAALIWLMQSLRFVSLVVDRGLSLRVFIELTSLLIPSFVA 92 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + + V + + EL ++ G S+ L + L A++ +I F+ I Sbjct: 93 VVLPITTFVVSLFVYQRLAGDRELTVMQAAGLSQFALARAGLGCALMATIMGFLLNLWIV 152 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +Q + + L+E +F ++ D + + I + + TL GI + D R Sbjct: 153 PTSYHAFRQYEFDIRNKMAAFMLQEGVFTKVSDAMTVYIRSRSHDGTLHGIMVEDDRQPG 212 Query: 183 THKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 A GS+ + D +IL DG + ++++ FK ++ SA+ Sbjct: 213 NQATILANHGSMMIVNDTPRVILYDGSRQVIDHKTGRLNMLVFKQDSMDLSSAHQEDARF 272 Query: 241 K-ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + A + +L LL+P+P + R ++ E +RLT L F ++ +VA + A Sbjct: 273 RDAAEMSLGELLHPDPQQVSERDT--GKFKVEGWRRLTSPLTCFSFAMVGLVAVLRGAFS 330 Query: 300 RQRKKIHPIFISLSI 314 R P+ L++ Sbjct: 331 RYGNIKRPLAAVLTV 345 >gi|330993929|ref|ZP_08317859.1| hypothetical protein SXCC_03824 [Gluconacetobacter sp. SXCC-1] gi|329758875|gb|EGG75389.1| hypothetical protein SXCC_03824 [Gluconacetobacter sp. SXCC-1] Length = 388 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 64/314 (20%), Positives = 146/314 (46%), Gaps = 11/314 (3%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y+LR + + + + +V + W+ Q L ++LV SL + L+++G LIP+ + ++ P Sbjct: 21 YMLRQLLLALVATTGALVTLIWLTQSLHFVSLVVGRGLSLRVFLELTGLLIPSFVAVILP 80 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + + + + EL ++ G S + +P L A + ++ + I P Sbjct: 81 ITTFVVVQFIYQRLGGDRELTVMQAAGLSPALMARPGLMCAAIATLVCLVLNVWIVPVSY 140 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 +Q + + + +++ +F ++ D++ + I + + TL GI + D R Sbjct: 141 HAFRQYEFQIRNRMAAFLIQDGVFTQVSDNMTVYIRARDKDGTLHGIMVEDDRTPGAEAT 200 Query: 187 YYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS-TIVLKAN 243 A+ G++ + D+ ++L +G + ++++ F T+ S +++ T + AN Sbjct: 201 ILAEEGNLVIINDQPRVVLFNGSRQEIDSHTGRLNVLTFTRNTIDLSSPHTAHTRLPDAN 260 Query: 244 DQNLSFLLNPNPNNPNYRPE---LLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + +++ LL+P+ + + R E +E +R RL+ F +I +V A + R Sbjct: 261 ELSIAQLLHPDLHQYSRRDESKMFIEAWR-----RLSTPFCAFSFAMIGLVGAMGGSHSR 315 Query: 301 QRKKIHPIFISLSI 314 Q + P+ L++ Sbjct: 316 QAGIVRPVLAILAV 329 >gi|144897578|emb|CAM74442.1| conserved hypothetical protein, membrane [Magnetospirillum gryphiswaldense MSR-1] Length = 373 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 73/349 (20%), Positives = 147/349 (42%), Gaps = 13/349 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y LR + L + + W+ Q L+ I ++ + S+ LK++G L+P+ Sbjct: 1 MTGITRYFLRQLAVGMLFVSAALTCVLWLTQSLRLIEMIVNQGISVTTFLKLTGMLMPSF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P +N + EL+++ G S L KP L LA + +I ++ Sbjct: 61 LVVIIPIALFAVILFTYNKLNTDRELVVLRAAGLSNWALAKPALILAGIATIMGYVLSVW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P+ +++ + ++ L+E F + + I + L G+ + D R Sbjct: 121 IIPQTVQNFREVQWSIRNDISNLLLQEGTFNKFGKGVTIYVRTRTSEGELLGLLVHDKRS 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYT--LQTESANSS 236 A+ G++ I++ +G + + +S++ F SYT L ++ Sbjct: 181 PTKPVTLMAEKGALVFTETGPRILMVNGNRQQLPDGTGQLSVLNFDSYTVDLSMSGGDNG 240 Query: 237 TIVLKANDQNLSFLLNPNPNN---PNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + A + +++ LLN + +YR + E H+RLT L+ + + LI++ A Sbjct: 241 SRFRDARELSMAELLNADEAQMGVTDYRRA-----KGELHQRLTSPLYSLGYTLIAL-AT 294 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 A +R + I ++ + GV + + P ++P LY+ Sbjct: 295 LLTAGFDRRGQTVTILTAIGLMVGVQAAVLGLANLSASKPIFLPFLYVL 343 >gi|218516795|ref|ZP_03513635.1| putative permease protein [Rhizobium etli 8C-3] Length = 102 Score = 79.3 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 38/90 (42%), Positives = 61/90 (67%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YILR +G+ FL++ L ++ I W Q+LQRINLV+ S +S+ K++ ++P++ Sbjct: 11 MKLLETYILRRVGQMFLVALLPVLAIIWTTQVLQRINLVTDSGQSIGSFAKLATMILPSI 70 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIID 90 +P+V PF + T LT+MN ++EL +ID Sbjct: 71 IPVVLPFALVIAITQTLTTMNNDSELTVID 100 >gi|23016381|ref|ZP_00056138.1| COG0795: Predicted permeases [Magnetospirillum magnetotacticum MS-1] Length = 372 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 70/299 (23%), Positives = 141/299 (47%), Gaps = 18/299 (6%) Query: 1 MKSFELYILR--CIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIP 58 M Y++R +G F+ + L V W+ Q L+ + ++ + S+ LK++ L+P Sbjct: 1 MSGITRYMMRQMLVGMIFVSAALACVL--WLTQSLRFVEMIVNKGLSIGAFLKLTILLMP 58 Query: 59 TVLPMVTPFC-FAMETTNVLTSMNR---NTELLIIDNTGTSRITLIKPVLFLAILLSIFL 114 L ++ P FA+ VL + NR + EL+++ G S ++L +P + L + +S Sbjct: 59 GFLVVIIPISLFAV----VLFTYNRLIADRELIVLRAAGLSHLSLARPAIILGLAVSAVG 114 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF 174 ++ I P + ++ + + L+E +F + + L I + PN L G+ Sbjct: 115 YLLSCWIIPHTVRSFHEMQWTIRNDIGNVLLQEGMFNKFGEGLTIYVRSRTPNGELTGLL 174 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQ--T 230 + D R Q A+ G++ Q +++ +G +P + +S++ F +YT+ T Sbjct: 175 VHDKRHPQRAVTLMAERGALVYTEQGPRVLMINGNRQEVTPGTGKLSLLYFDNYTVDFNT 234 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 + N A +++ LL+ + + N + E L ++SE H RL L+ + F L++ Sbjct: 235 ATGNKPDRFRDARERSTLELLSMDDSMEN-KGE-LRRFKSELHSRLASPLYNLGFPLLA 291 >gi|296116656|ref|ZP_06835266.1| permease YjgP/YjgQ family protein [Gluconacetobacter hansenii ATCC 23769] gi|295976868|gb|EFG83636.1| permease YjgP/YjgQ family protein [Gluconacetobacter hansenii ATCC 23769] Length = 386 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 68/314 (21%), Positives = 145/314 (46%), Gaps = 19/314 (6%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + Y+LR + + + + + + W+ Q L ++LV SL + ++++ LIP+ + + Sbjct: 18 LDRYVLRQLLLALVATTGALALLIWLTQSLHFVSLVVGRGLSLRVFVQLTSLLIPSFVAV 77 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI-IE 122 + P + + + + EL ++ G S + +P L A L+S+ + N+ + Sbjct: 78 ILPITTFVVVQFIYQRLGSDRELTVMQAAGLSPFMMARPALLCA-LVSVLACYALNLWVV 136 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +Q + + + +++ +F ++ D++ + I +P+ L GI + D R Sbjct: 137 PTAYHGFRQYEYQIRNKMAAFLIQDGVFTQVSDNMTVYIRARDPSGMLHGIMVEDDRQPD 196 Query: 183 THKIYYAQSGS--IDLDRQAIILNDG---EVHRKSPISKDISIMKFKSYTLQTESANSS- 236 A+ GS I D+ I+L +G E+ RK + ++++ F+ T+ + + + Sbjct: 197 AQATILAEEGSFVITNDQPRIVLFNGSRQEIDRK---TGRLNMLSFERNTIDLSAPHGTQ 253 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPE---LLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 T AN+ ++ LL+PN + R E ++E +R RLT L F +I +++A Sbjct: 254 TRQPDANELPITALLHPNLRQFSPRDEKKMIIEAWR-----RLTSPLCAFSFAMIGLLSA 308 Query: 294 DKRALVRQRKKIHP 307 R + P Sbjct: 309 LGGGFSRHGNIVRP 322 >gi|83312813|ref|YP_423077.1| permease [Magnetospirillum magneticum AMB-1] gi|82947654|dbj|BAE52518.1| Predicted permease [Magnetospirillum magneticum AMB-1] Length = 368 Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 68/286 (23%), Positives = 135/286 (47%), Gaps = 16/286 (5%) Query: 12 IGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFC-FA 70 +G F+ + L V W+ Q L+ + ++ + S+ LK++ L+P L ++ P FA Sbjct: 7 VGMIFVSAALACVL--WLTQSLRFVEMIVNKGLSIGAFLKLTILLMPGFLVVIIPISLFA 64 Query: 71 METTNVLTSMNR---NTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 + VL + NR + EL+++ G S + L +P + L + +S ++ I P Sbjct: 65 V----VLFTYNRLIADRELVVLRAAGLSHLALARPAVILGLAVSAVGYMLSCWIIPVTVR 120 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 + ++ + + L+E +F + + L I + PN L G+ + D R Q Sbjct: 121 SFHEMQWTIRNDIGNVLLQEGMFNKFGEGLTIYVRSRTPNGELTGLLVHDKRHAQRPVTL 180 Query: 188 YAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQ--TESANSSTIVLKAN 243 A+ G++ Q +++ +G +P + +S++ F +YT+ T + V A Sbjct: 181 MAERGALVYTEQGPRVLMVNGNRQEVTPGTGKLSLLYFDNYTVDFNTATGAKHDRVRDAR 240 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 +++ LL + + N + E L ++SE H RLT L+ + F L++ Sbjct: 241 ERSTLELLAIDSSMEN-KGE-LRRFKSELHSRLTSPLYSLGFPLLA 284 >gi|95928709|ref|ZP_01311455.1| permease YjgP/YjgQ [Desulfuromonas acetoxidans DSM 684] gi|95135054|gb|EAT16707.1| permease YjgP/YjgQ [Desulfuromonas acetoxidans DSM 684] Length = 395 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 75/300 (25%), Positives = 131/300 (43%), Gaps = 18/300 (6%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI R I FL+S + F+ + ++L+ I +V +++ +L + L+P+ + Sbjct: 6 LQTYISREIIAPFLLSLVLFTFVLLLSRLLKLIEMVVDKGVAVSEILHLFACLLPSFFVI 65 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P F + ++ ++E++ + G S L +PVL +A+L+ F + EP Sbjct: 66 TVPLSFLLAVMLAFGRLSADSEIVAMKAAGFSLYRLSQPVLIIALLVCGFTAYLTLVAEP 125 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKY-NPNNTLQGIFIVDSRDTQ 182 R +KQ + L+ +F D L + + N NT+ G+FI D R Sbjct: 126 AGRVKLKQRLIDIAYSKAAVALQPQIFNEEFDGLMMYANDVDNQTNTMTGVFISDERMGN 185 Query: 183 THKIYYAQSGSIDLDRQA----IILNDGEVHRKSPI----SKDISIMKFKSY----TLQT 230 T I AQ G I DR + L DG +HR P+ + ++ F+SY +L T Sbjct: 186 TPSIIVAQRGEIRSDRTNGSLLMHLRDGSIHR--PVIRSGKRSYQVVDFQSYDVNLSLNT 243 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 ++ LK + L+ +P E R E +RL P+IF L+++ Sbjct: 244 ADKEEKSLNLKPKEMTTKALMQ---ADPELSEEKQRERRVELMERLVLPFSPLIFALLAV 300 >gi|148265754|ref|YP_001232460.1| permease YjgP/YjgQ family protein [Geobacter uraniireducens Rf4] gi|146399254|gb|ABQ27887.1| permease YjgP/YjgQ family protein [Geobacter uraniireducens Rf4] Length = 389 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 71/299 (23%), Positives = 139/299 (46%), Gaps = 16/299 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K+ LYI + I FL+ F+ + ++L+ +V + L +L++ YL+P+ L Sbjct: 3 KTLYLYIFKEIPPPFLLGVATFTFVLLMGRLLRLAEMVVTKGVPLADVLRMVFYLLPSFL 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIF-LFISENI 120 + P F + ++ ++E+ + +G S L+ PV A++ + FI+ Sbjct: 63 LVTIPMAFLLAILLAFGRLSGDSEITAMKASGVSLYGLLPPVFCFALIAYLAGAFITVYA 122 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD---LYIKISKYNPN-NTLQGIFIV 176 + P ++ K+L + A ++E +F +DD L I +YN T+ GI I Sbjct: 123 V-PWGNTSFKKLLVEVVEARASLGIKEKIF---NDDFPGLVIYTDRYNQQKQTMSGILIQ 178 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 D RD YA+SG I+ D + L++G +HR +++F++Y L + Sbjct: 179 DERDPLEPSTIYARSGVINSDPATKSIRLRLDNGSIHRTQG-KTGYRLVEFRNYDLNI-N 236 Query: 233 ANSSTIVLKANDQNLSFL-LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 N + + N+ ++S L N + + +++ R E+H+R + +IF L+ + Sbjct: 237 LNQAAQTVNKNELDMSLAELRANLASGRFDAKMMRDMRLEYHRRFSLPFACLIFALVGM 295 >gi|83945296|ref|ZP_00957645.1| hypothetical protein OA2633_00975 [Oceanicaulis alexandrii HTCC2633] gi|83851466|gb|EAP89322.1| hypothetical protein OA2633_00975 [Oceanicaulis alexandrii HTCC2633] Length = 375 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 66/284 (23%), Positives = 129/284 (45%), Gaps = 5/284 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y R FL + + +A + Q L ++L++ E+ +L+ I+ +P V Sbjct: 1 MTLFQRYTFRQALWPFLGAMAALTGLAVLTQSLSNLDLMAERGETALVLITITVLAMPQV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + L + ++EL + G SR + P L LAI + + + Sbjct: 61 IALLLPIAVFLAVAIALNRLTSDSELTVAAAAGMSRFQRVSPFLRLAIYVVLVNLVINLF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 ++P ++Q + + L S++ E F L D + + + + ++ L +FI+D R Sbjct: 121 VQPASFRLMRQQLFEIRTDLAASFMREGEFVPLGDQVTFYVREISDDSVLNDVFIMDDRT 180 Query: 181 TQTHKIYYAQSGSIDL-DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE--SANSST 237 Q+ Y A+ G I DR ++L + V + S ++ + F S ++ N+++ Sbjct: 181 GQSAA-YAARRGRIAATDRGPVMLLEDGVRTQVDQSGVLTNLSFDSTKVELTLFVDNTAS 239 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLF 281 + K +D+ L LL P P + Y +E H RL+ L+ Sbjct: 240 LFFKESDKYLPELLRPTPADIARAGGKGRLY-AEGHYRLSAPLY 282 >gi|163735795|ref|ZP_02143224.1| hypothetical protein RLO149_00570 [Roseobacter litoralis Och 149] gi|161390881|gb|EDQ15221.1| hypothetical protein RLO149_00570 [Roseobacter litoralis Och 149] Length = 375 Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 80/371 (21%), Positives = 159/371 (42%), Gaps = 23/371 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIP-- 58 M + Y+L + F L +V I W+ + + + + S +S + L+ + +P Sbjct: 1 MVRLDRYMLSQLLVLFGFFALVLVAILWINRGVSLFDQLISDGQSALVFLEFTALGLPKL 60 Query: 59 --TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 TVLP+ T F A+ TN MN +EL ++ TG+ + L +PVL +++ + + Sbjct: 61 ITTVLPIAT-FAAAVYVTN---RMNNESELTVLQATGSGPVRLARPVLVFGVIVFLMASV 116 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 +++ P + + + T L E F + + + + + L+ +F+ Sbjct: 117 LHHVLMPLAQQQLGHRQNEIAQNATSRLLTEGRFLHPSEGVTFYTQQIDDDGVLRDVFLS 176 Query: 177 DSRDTQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 D R + IY A + D DR ++I+ DG R + + ++ F+ ++ + Sbjct: 177 DRRHVEEGVIYTAAHAYLIRDEDRTSLIMVDGLAQRLTTATDRLATANFRDFSFDISALV 236 Query: 235 SSTIVLKAN-DQNLSF-LLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--- 289 + + + + D+ +F LL P + T FH R+ LF ++ LI Sbjct: 237 QNDVSQRLDPDRMTTFQLLTPWDQLSRETGRSIGTISQSFHARIADPLFCIVAALIGFST 296 Query: 290 -IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL--FLFCI 346 ++ R V +++ F+ L GV S + + ++P P+LYL F+ + Sbjct: 297 LMIGGFSRFGV--WREVAFAFVLLVAIDGV---RSTLQSPVRRDPELWPLLYLPTFISAL 351 Query: 347 SSIFLLMIKKK 357 I +L I + Sbjct: 352 LVIAMLWIAAR 362 >gi|114569777|ref|YP_756457.1| permease YjgP/YjgQ family protein [Maricaulis maris MCS10] gi|114340239|gb|ABI65519.1| permease YjgP/YjgQ family protein [Maricaulis maris MCS10] Length = 373 Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 69/309 (22%), Positives = 134/309 (43%), Gaps = 15/309 (4%) Query: 16 FLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTN 75 F+ + +A + Q L ++LVS +E+ +K++ +P + ++ P + Sbjct: 16 FMTAIAAFAGLALLTQSLSNVDLVSGYSETALTFIKVTALALPHLTALLVPIALFVA--- 72 Query: 76 VLTSMNR---NTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQL 132 VL+S+NR ++EL+I G SR L+ P++ L + + I +++P +++ Sbjct: 73 VLSSLNRLTGDSELVIASAAGVSRFGLLSPIMRLGVYVLIANLAVNLLLQPVAYREMRRS 132 Query: 133 SAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSG 192 + + S + F +L + I + + +Q I I DSR T Y A+ G Sbjct: 133 LHTLRSDVAASLVTPGAFSQLGQGVTIYARERGRDGRMQDILIHDSRGTDGASTYSAREG 192 Query: 193 SI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSSTIVLKANDQNLS 248 + DR A++L DG + + + ++ F Y + + K +D+ L Sbjct: 193 VVVRSGDRSAMVLIDGNLQQIDS-AGELYYANFDRYEFDLGEFVGPADAMFFKESDRYLH 251 Query: 249 FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV---AADKRALVRQRKKI 305 LL P+ R E +E H RL+ L+ + F LI+ A D + R+ + Sbjct: 252 ELLWPSAAEVA-RTGGPERAWAEAHYRLSAPLYNLAFALIAAACFLAGDHSRMGYGRRVM 310 Query: 306 HPIFISLSI 314 + L++ Sbjct: 311 IAVGAGLTL 319 >gi|126462312|ref|YP_001043426.1| permease YjgP/YjgQ family protein [Rhodobacter sphaeroides ATCC 17029] gi|126103976|gb|ABN76654.1| permease YjgP/YjgQ family protein [Rhodobacter sphaeroides ATCC 17029] Length = 376 Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 44/190 (23%), Positives = 92/190 (48%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y+L + F L +V + W+ + + + + S +S + L+ S +P V Sbjct: 1 MARFDRYLLSQLVALFGFFSLVLVLVYWINRAVGLFDDLISDGQSALVFLEFSLLALPNV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V P T V+ +++ +EL+++ TG S L +PV++ +++++ + + N+ Sbjct: 61 IRLVLPLSAFAATIYVVNRLSQESELVVMQATGFSAFRLARPVIWFGLIVALMMIVLMNL 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P R+T+ SA+ T +L + F D + + I + L+ + +VD RD Sbjct: 121 LVPASRATLSARSAEISQNATARFLRDGEFLHPADGVTLYIREVTETGELRDLLLVDDRD 180 Query: 181 TQTHKIYYAQ 190 Y A+ Sbjct: 181 PARSTAYTAR 190 >gi|77463457|ref|YP_352961.1| permease [Rhodobacter sphaeroides 2.4.1] gi|77387875|gb|ABA79060.1| Predicted permease [Rhodobacter sphaeroides 2.4.1] Length = 376 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 44/190 (23%), Positives = 92/190 (48%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y+L + F L +V + W+ + + + + S +S + L+ S +P V Sbjct: 1 MARFDRYLLSQLVALFGFFSLVLVLVYWINRAVGLFDDLISDGQSALVFLEFSLLALPNV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V P T V+ +++ +EL+++ TG S L +PV++ +++++ + + N+ Sbjct: 61 IRLVLPLSAFAATIYVVNRLSQESELVVMQATGFSAFRLARPVIWFGLIVALMMIVLMNL 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P R+T+ SA+ T +L + F D + + I + L+ + +VD RD Sbjct: 121 LVPASRATLSARSAEISQNATARFLRDGEFLHPADGVTLYIREVTETGELRDLLLVDDRD 180 Query: 181 TQTHKIYYAQ 190 Y A+ Sbjct: 181 PARSTAYTAR 190 >gi|302383687|ref|YP_003819510.1| permease YjgP/YjgQ family protein [Brevundimonas subvibrioides ATCC 15264] gi|302194315|gb|ADL01887.1| permease YjgP/YjgQ family protein [Brevundimonas subvibrioides ATCC 15264] Length = 376 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 62/284 (21%), Positives = 123/284 (43%), Gaps = 13/284 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+ R I L +C + I + Q L ++ ++ +S+ +LLK++ +P + Sbjct: 1 MTLIQKYLFRQISLPVLAACASLAGIGILSQTLDQLEIIVERGQSVWVLLKLTLLAVPQL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + LT + R EL +G SR +I P +LA+ +++ + ++ + Sbjct: 61 FSVILPIGLFVGALIALTRLQREQELTAAYASGMSRWQMIAPGAWLAVCVAVVMLLTNVV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV--DS 178 I+P + T ++ + + L +EE F + + L + + + N L+ +FI + Sbjct: 121 IQPWSQRTAREQAFSIRTDLAALLVEEGRFVQGPNGLTVYVQQIEQNGLLKNLFIYIQNG 180 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT--LQTESANSS 236 + T A+ G +D + + + G + S + + + F Y L + Sbjct: 181 DEVTTWDASEARFGRVD-GQPVLTMKQGSWQQYSS-AGVLQQLVFDGYVFPLGQYVTDDQ 238 Query: 237 TIVLKANDQNLSFLLNPNP---NNPNYRPELLETYRSEFHKRLT 277 I K D + L NP + R ELL +E H RL+ Sbjct: 239 KIRYKPADLWMGQLFNPTDALVRDTGSRGELL----AEAHSRLS 278 >gi|162149095|ref|YP_001603556.1| permease [Gluconacetobacter diazotrophicus PAl 5] gi|209545162|ref|YP_002277391.1| permease YjgP/YjgQ family protein [Gluconacetobacter diazotrophicus PAl 5] gi|161787672|emb|CAP57268.1| putative permease [Gluconacetobacter diazotrophicus PAl 5] gi|209532839|gb|ACI52776.1| permease YjgP/YjgQ family protein [Gluconacetobacter diazotrophicus PAl 5] Length = 398 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 75/345 (21%), Positives = 145/345 (42%), Gaps = 14/345 (4%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + Y+LR + + L + + + W+ Q L ++LV SL + + ++ L+P+ + + Sbjct: 21 LDRYVLRQLLVALLATTGGLSALIWLTQSLHFVSLVVERGLSLRVFIGLTSLLVPSFVAV 80 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 + P + V + + EL ++ G S + + L A + + I I P Sbjct: 81 ILPITTFIVVQFVYQRLAGDRELTVMRAAGLSPFFIARAGLLCATISVVSCMILNIWIVP 140 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 KQ + + + L+E +F + + + + + + TL GI + D R Sbjct: 141 LSFHAFKQYEFQIRNRMAAFMLQEGVFTPVSPTMTVYVRSRDRDGTLHGIVVEDDRQPDN 200 Query: 184 HKIYYAQSGS-IDLDRQA-IILNDG---EVHRKSPISKDISIMKFKSYTLQ-TESANSST 237 AQ G+ + +D Q ++L DG E+ RK S ++++ F T+ T S Sbjct: 201 PSTVLAQRGTMLVVDNQPRVVLYDGSRQEIDRK---SGRLNVLTFSRNTIDLTSSRGDQA 257 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 A + +L LL+P+P P + E +RLT F ++ +VA + A Sbjct: 258 RFRDATEMSLHELLHPDPQ--EVAPRDRGKFAVEAWRRLTAPFTAFSFAMVGLVAVLRGA 315 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKI-EQNPYYIPILYL 341 R I P LS+ S ++ + +N IP++++ Sbjct: 316 FSRHGNIIRPAVAILSVV--SLLALSLMVQNLASRNTSLIPLMWV 358 >gi|58038773|ref|YP_190737.1| hypothetical protein GOX0298 [Gluconobacter oxydans 621H] gi|58001187|gb|AAW60081.1| Hypothetical transmembrane protein [Gluconobacter oxydans 621H] Length = 390 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 61/318 (19%), Positives = 135/318 (42%), Gaps = 13/318 (4%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YILR + + L + W+ Q L +++V SL + ++++ ++P+ + + Sbjct: 16 LDRYILRQLLIALLALTGGATALIWLTQSLHFVSMVVQHGLSLRVFIQLTSLMLPSFIAV 75 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 + P + M + EL ++ G S + L +P L A + ++ + P Sbjct: 76 ILPITTFLVVLFTYQRMVGDRELTVMRAAGRSPLELARPGLLCAFFSVVLCYVLTLWLAP 135 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + + + L++ +F L +D+ + + + L G+ + D RD + Sbjct: 136 VSYHAFHRYEFQIRNRMAAFLLQDGVFTSLSNDMTVYVRGRTSDGQLHGVLVEDDRDPDS 195 Query: 184 HKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 H A+ G++ + D+ ++L DG + ++++ F T+ S+ + Sbjct: 196 HTTILAERGTMVVVNDQPRVVLYDGSREEIDRHTGRLNVLTFGRNTIDLTSSRQHNHEDR 255 Query: 242 ANDQ-NLSFLLNPNPNNPNYRPELLETYRSE----FHKRLTQWLFPVIFGLISIVAADKR 296 D+ +L L +P+P+ E+ E R + +RLT L + F +I +V + Sbjct: 256 DPDEMSLRELFHPDPH------EVSERDRGKNIVVGWRRLTSPLTALSFAMIGLVTVLRG 309 Query: 297 ALVRQRKKIHPIFISLSI 314 A R P+ L++ Sbjct: 310 AFSRHGNITRPLIAILTV 327 >gi|327398771|ref|YP_004339640.1| permease YjgP/YjgQ family protein [Hippea maritima DSM 10411] gi|327181400|gb|AEA33581.1| permease YjgP/YjgQ family protein [Hippea maritima DSM 10411] Length = 348 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 62/257 (24%), Positives = 112/257 (43%), Gaps = 22/257 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K + YIL+ + SF++S I + + +++ +L+ S +LLKI GY + + Sbjct: 2 LKKLDRYILKSLIVSFVISFFVIAVVMLIGDLVKLYDLLFGKGSSFIVLLKILGYTVVFL 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + V + ++ N+E+ I + G S + P ++ + +FLF S Sbjct: 62 LAFIVPMALTIAINYVYSDLSNNSEITAIRSCGISLFRVYFPAFLFSVAVFVFLFYSIAF 121 Query: 121 IEPKCRSTIKQLSAKAQLALTF-----SYLEENLFF-RLDDDLYIKISKYNPNNT-LQGI 173 + PK R LS + ++A TF + L+ N+F+ ++D ++IK +P+ L+ + Sbjct: 122 VAPKAR-----LSYRVEIAKTFRNKVYAALKPNMFYDKVDGVMWIK--NLSPDKKHLKDV 174 Query: 174 FIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 F Q KI+ A+ G I+ V SP F Y L + Sbjct: 175 FF-----AQKGKIFLAKKGDFKDIPSGILAEFFNVKMYSPSKSGFEYGSFDRYELAFLTG 229 Query: 234 NSSTIVLKANDQNLSFL 250 K N N F+ Sbjct: 230 RG---YFKPNKNNTRFM 243 >gi|221639315|ref|YP_002525577.1| permease Yjgp/YjgQ family protein [Rhodobacter sphaeroides KD131] gi|221160096|gb|ACM01076.1| Permease YjgP/YjgQ family protein [Rhodobacter sphaeroides KD131] Length = 364 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/171 (22%), Positives = 84/171 (49%) Query: 20 CLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTS 79 L +V + W+ + + + + S +S + L+ S +P V+ +V P T V+ Sbjct: 8 SLVLVLVYWINRAVGLFDDLISDGQSALVFLEFSLLALPNVIRLVLPLSAFAATIYVVNR 67 Query: 80 MNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLA 139 +++ +EL+++ TG S L +PV++ +++++ + + N++ P R+T+ SA+ Sbjct: 68 LSQESELVVMQATGFSAFRLARPVIWFGLIVALMMIVLMNLLVPASRATLSARSAEISQN 127 Query: 140 LTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQ 190 T +L + F D + + I + L+ + +VD RD Y A+ Sbjct: 128 ATARFLRDGEFLHPADGVTLYIREVTETGELRDLLLVDDRDPARSTAYTAR 178 >gi|332558334|ref|ZP_08412656.1| permease [Rhodobacter sphaeroides WS8N] gi|332276046|gb|EGJ21361.1| permease [Rhodobacter sphaeroides WS8N] Length = 364 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/171 (22%), Positives = 84/171 (49%) Query: 20 CLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTS 79 L +V + W+ + + + + S +S + L+ S +P V+ +V P T V+ Sbjct: 8 SLVLVLVYWINRAVGLFDDLISDGQSALVFLEFSLLALPNVIRLVLPLSAFAATIYVVNR 67 Query: 80 MNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLA 139 +++ +EL+++ TG S L +PV++ +++++ + + N++ P R+T+ SA+ Sbjct: 68 LSQESELVVMQATGFSAFRLARPVIWFGLIVALMMIVLMNLLVPASRATLSARSAEISQN 127 Query: 140 LTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQ 190 T +L + F D + + I + L+ + +VD RD Y A+ Sbjct: 128 ATARFLRDGEFLHPADGVTLYIREVTETGELRDLLLVDDRDPARSTAYTAR 178 >gi|209964866|ref|YP_002297781.1| predicted permease YjgP [Rhodospirillum centenum SW] gi|209958332|gb|ACI98968.1| predicted permease YjgP [Rhodospirillum centenum SW] Length = 372 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 74/352 (21%), Positives = 144/352 (40%), Gaps = 23/352 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+LR + + + + W+ Q L+ + +V SL I +++ PT Sbjct: 1 MNQIDRYLLRNLAVATVFVTAGLSAAIWLTQSLRLVEMVVEGGASLGIFFRLALLTFPTF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNR---NTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 L ++ P VL + NR ++EL+++ G S + L +P L LA ++++ + Sbjct: 61 LSLILPVGL---LAAVLFTYNRLIMDSELVVMRAAGLSPMALARPALILAAVVALLCYTL 117 Query: 118 ENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD 177 P + + +L + ++ L E F + L + + + L G+ I D Sbjct: 118 TLFAGPAAQRELVRLRQAVRSDVSAVLLREGTFNDVGTGLTVYVRERGREGALSGLLIHD 177 Query: 178 SRDTQTHKIYYAQSG---SIDLDRQAIILNDGEV--HRKSPISKDISIMKFKSYT--LQT 230 R A+ G +D ++ N ++ H+ ++ ++F YT LQ Sbjct: 178 LRSPGVATTVVAERGRLVEVDDVPHVVVFNGTQIKFHQDDGRTE---WLEFARYTVDLQA 234 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 ++ +++L L+N ++P R + R+E H RL L P+ F + + Sbjct: 235 LRKELGPRWIEPRERSLRDLVNLT-DDPLDR-QFFGRLRAELHSRLATPLLPLAFTAVGL 292 Query: 291 VAADKRALVR--QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY 340 A R Q ++I + + G S ++ K NP P+LY Sbjct: 293 AALLPGEFSRRGQGRRIALAAVGALVLQSAVLGISNLVGK---NPALTPLLY 341 >gi|163743163|ref|ZP_02150545.1| hypothetical protein RG210_14720 [Phaeobacter gallaeciensis 2.10] gi|161383580|gb|EDQ07967.1| hypothetical protein RG210_14720 [Phaeobacter gallaeciensis 2.10] Length = 376 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 44/215 (20%), Positives = 96/215 (44%), Gaps = 2/215 (0%) Query: 20 CLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTS 79 L +V + W+ + + + + +S + L+ + +P ++ MV P + V Sbjct: 13 ALILVAVFWINRAVVLFDRLIGDGQSALVFLEFTALALPNLVRMVLPVAAFAASVWVTNR 72 Query: 80 MNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLA 139 +N +EL ++ TGTS + KP L ++ ++ + I +++ P +T++Q ++ Sbjct: 73 LNSESELTVLRATGTSPWQMAKPALVFGLITAVMMSILTHVLLPASIATLEQRESEVARN 132 Query: 140 LTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSI--DLD 197 +T L E F + I + +P+ TL +F+ D R+ Y + D + Sbjct: 133 VTAKLLSEGDFLHPARGVTFYIGRIDPDGTLNDVFLSDRRNAAESVTYTGGKAYLVRDGE 192 Query: 198 RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 R +++ DG R + ++ +S F ++ S Sbjct: 193 RTHLVMVDGMSQRINTETQRLSSTIFSDFSYDISS 227 >gi|163746448|ref|ZP_02153806.1| hypothetical protein OIHEL45_13625 [Oceanibulbus indolifex HEL-45] gi|161380333|gb|EDQ04744.1| hypothetical protein OIHEL45_13625 [Oceanibulbus indolifex HEL-45] Length = 377 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 59/299 (19%), Positives = 120/299 (40%), Gaps = 16/299 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YIL + F L +V + W+ + + + + +S + L+ + +P + Sbjct: 1 MARIDRYILSQLLVMFGFFALVLVALFWINRAVVLFDRLIGDGQSALVFLEFTALGLPKL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + V M+ +EL ++ G+ L +PV + + + + + Sbjct: 61 IVTVLPIATFAASVYVTNRMSGESELTVLQAAGSGPWRLARPVFVFGLCVGLMMTALSHF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + +KQ A+ LT L E F D++ + + L+ +F+ D R Sbjct: 121 LVPMAQGQLKQREAEISRNLTAQLLTEGTFLHPSDEVTFYTRAIDNDGVLRDVFLSDRRK 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 IY A + + D +I+ +G R ++ KF+ ++ S+ Sbjct: 181 ADEGVIYTAAEAYLARNGDNTTLIMLNGMAQRLDTEQNRLATAKFRDFSFDISPLVSTD- 239 Query: 239 VLKANDQNLSFLLNPN--------PNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 A DQ++S ++ P+ + P ++ E H RL Q LF ++ +I Sbjct: 240 --DATDQSVSSMVTPDLLWDWAGLAAQLDTAPGIIA---EELHSRLAQPLFCIVAAMIG 293 >gi|91206136|ref|YP_538491.1| putative permeases [Rickettsia bellii RML369-C] gi|91069680|gb|ABE05402.1| Putative permeases [Rickettsia bellii RML369-C] Length = 360 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 71/340 (20%), Positives = 163/340 (47%), Gaps = 14/340 (4%) Query: 26 IAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTE 85 + W+ Q+L+ + L + ++ L + ++PT+L ++ P + + ++ + Sbjct: 26 LVWITQVLKLLYLFDKGIKVMD-FLSLIILVLPTLLFILLPIITVITIIYIYNNLKIERQ 84 Query: 86 LLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYL 145 L+I+ +G + L P L++A+++++ + + + P +K + + S + Sbjct: 85 LIILQTSGVGNLQLALPALYVALIVALLAYYISSTVMPLSHINLKSRLSFIKNNYISSMI 144 Query: 146 EENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILND 205 EE F ++ D+ + I K + N ++G+ I D+R+T + +A SG +++ I Sbjct: 145 EEKTFNKITKDITVYIDKKSTGNVMKGVIIFDNRNTDNPSVVFANSGILNIHENDPIFEL 204 Query: 206 GEVHRKS-PISKDISIMKFKSYTLQTESAN-----SSTIVLKANDQNLSFLLNPNPN-NP 258 + R+ I+ +I+ + F S ++ ++ N +T +AN+ + LL P + NP Sbjct: 205 SKGSRQEYDINGNITQLTFDSLMIKLQNDNPLISQRTTHNKEANEYYIEELLEPPVDLNP 264 Query: 259 NYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGV 318 + +L+ +E H+R+ L+ + +++ K ++ + +F +LS+ Sbjct: 265 MKKIKLI----AEAHQRIIWPLYNFVLPFLALAVFLKYPYSKKTTFMPILFAALSVLIAT 320 Query: 319 FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL-LMIKKK 357 F+ + + +N +I YL +F I SI L L I+K+ Sbjct: 321 SAHFT-LQNFASKNLAFITACYLNIFFILSIGLYLFIRKR 359 >gi|146277168|ref|YP_001167327.1| permease YjgP/YjgQ family protein [Rhodobacter sphaeroides ATCC 17025] gi|145555409|gb|ABP70022.1| permease YjgP/YjgQ family protein [Rhodobacter sphaeroides ATCC 17025] Length = 376 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 43/190 (22%), Positives = 91/190 (47%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y+L + F L +V + W+ + + + + S +S + L+ S +P V Sbjct: 1 MSRFDRYLLSQLVALFGFFSLVLVLVYWINRAVGLFDDLISDGQSALVFLEFSLLALPNV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V P T ++ +++ +EL+++ TG S L +PV+ +++++ + + N+ Sbjct: 61 IRLVLPLSAFAATIYIVNRLSQESELVVMQATGFSAFRLARPVILFGLIVAMMMIVLMNL 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P R+T+ SA+ T +L + F + + I + + L + +VD RD Sbjct: 121 LVPASRATLSARSAEISENATARFLRDGEFLHPVRGVTLYIREISETGELNDLLLVDDRD 180 Query: 181 TQTHKIYYAQ 190 IY A+ Sbjct: 181 RARSTIYTAR 190 >gi|163739704|ref|ZP_02147112.1| permease YjgP/YjgQ [Phaeobacter gallaeciensis BS107] gi|161386934|gb|EDQ11295.1| permease YjgP/YjgQ [Phaeobacter gallaeciensis BS107] Length = 376 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 43/215 (20%), Positives = 96/215 (44%), Gaps = 2/215 (0%) Query: 20 CLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTS 79 L +V + W+ + + + + +S + L+ + +P ++ MV P + V Sbjct: 13 ALILVAVFWINRAVVLFDRLIGDGQSALVFLEFTALALPNLVRMVLPVAAFAASVWVTNR 72 Query: 80 MNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLA 139 +N +EL ++ TGTS + KP + ++ ++ + I +++ P +T++Q ++ Sbjct: 73 LNSESELTVLRATGTSPWQMAKPAMVFGLITAVMMSILTHVLLPASIATLEQRESEVARN 132 Query: 140 LTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSI--DLD 197 +T L E F + I + +P+ TL +F+ D R+ Y + D + Sbjct: 133 VTAKLLSEGDFLHPARGVTFYIGRIDPDGTLNDVFLSDRRNAAESVTYTGGKAYLVRDGE 192 Query: 198 RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 R +++ DG R + ++ +S F ++ S Sbjct: 193 RTHLVMVDGMSQRINTETQRLSSTIFSDFSYDISS 227 >gi|157826432|ref|YP_001495496.1| putative permeases [Rickettsia bellii OSU 85-389] gi|157801736|gb|ABV78459.1| Putative permeases [Rickettsia bellii OSU 85-389] Length = 360 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 71/340 (20%), Positives = 163/340 (47%), Gaps = 14/340 (4%) Query: 26 IAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTE 85 + W+ Q+L+ + L + ++ L + ++PT+L ++ P + + ++ + Sbjct: 26 LVWITQVLKLLYLFDKGIKVMD-FLSLIILVLPTLLFILLPIITVITIIYIYNNLKIERQ 84 Query: 86 LLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYL 145 L+I+ +G + L P L++A+++++ + + + P +K + + S + Sbjct: 85 LIILQTSGVGNLQLALPALYVALIVALLAYYISSTVMPLSHINLKSRLSFIKNNYISSMI 144 Query: 146 EENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILND 205 EE F ++ D+ + I K + N ++G+ I D+R+T + +A SG +++ I Sbjct: 145 EEKTFNKITKDITVYIDKKSTGNVMKGVIIFDNRNTDNPSVVFANSGILNIYENDPIFEL 204 Query: 206 GEVHRKS-PISKDISIMKFKSYTLQTESAN-----SSTIVLKANDQNLSFLLNPNPN-NP 258 + R+ I+ +I+ + F S ++ ++ N +T +AN+ + LL P + NP Sbjct: 205 SKGSRQEYDINGNITQLTFDSLMIKLQNDNPLISQRTTHNKEANEYYIEELLEPPVDLNP 264 Query: 259 NYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGV 318 + +L+ +E H+R+ L+ + +++ K ++ + +F +LS+ Sbjct: 265 MKKIKLI----AEAHQRIIWPLYNFVLPFLALAVFLKYPYSKKTTFMPILFAALSVLIAT 320 Query: 319 FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL-LMIKKK 357 F+ + + +N +I YL +F I SI L L I+K+ Sbjct: 321 SAHFT-LQNFASKNLAFITACYLNIFFILSIGLYLFIRKR 359 >gi|154253775|ref|YP_001414599.1| permease YjgP/YjgQ family protein [Parvibaculum lavamentivorans DS-1] gi|154157725|gb|ABS64942.1| permease YjgP/YjgQ family protein [Parvibaculum lavamentivorans DS-1] Length = 388 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 59/302 (19%), Positives = 136/302 (45%), Gaps = 14/302 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +KS Y+ F+++ + + I W+ Q L+ ++++ + ++L +++ +P+ Sbjct: 2 LKSLSRYLFFQTLGPFVVASVVLSGIIWLTQALRMLDVLITQGQTLLTFFELTVLALPST 61 Query: 61 LPMVTP---FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 L +V P FC + + + L S ++E++++ G SR + P+L +A+ S+ + Sbjct: 62 LMIVLPISLFCAVLYSLHKLIS---DSEIVVMFAAGVSRWVVALPLLAIAMGTSVIILAF 118 Query: 118 ENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD 177 I P +K + + + + + E F L + + + + T G+ + D Sbjct: 119 SIYIAPAGMRELKSRLVEIRSDVATAMIREGTFSNPATGLTVFVRERAADGTTYGVLVHD 178 Query: 178 SRDTQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKF-----KSYTLQT 230 R Y A++GS+ + +++ +G + R S + S F +Y L Sbjct: 179 GRIPSAPVTYMAETGSLVRGPNGPLLVMFNGNIQRASRSGTETSAATFLYFDKYTYDLSQ 238 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 + T+ + ++ L+NP ++ Y + + ++ H+RL + +PV+ LI + Sbjct: 239 YMEDEPTLSYEGRERYFHELVNPASDD-LYGQQNRDKLLADAHERLVEGFYPVMLTLIGL 297 Query: 291 VA 292 A Sbjct: 298 AA 299 >gi|110680306|ref|YP_683313.1| hypothetical protein RD1_3119 [Roseobacter denitrificans OCh 114] gi|109456422|gb|ABG32627.1| membrane protein, putative [Roseobacter denitrificans OCh 114] Length = 375 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 72/351 (20%), Positives = 150/351 (42%), Gaps = 29/351 (8%) Query: 20 CLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIP----TVLPMVTPFCFAMETTN 75 L +V I W+ + + + + S +S + L+ + +P TVLP+ T F A+ TN Sbjct: 20 ALVLVAILWINRGVSLFDELISDGQSALVFLEFTALGLPKLITTVLPIAT-FAAAVYVTN 78 Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAK 135 MN +EL ++ TG+ + L +PVL +++ + + +++ P + + + Sbjct: 79 ---RMNNESELTVLQATGSGPVRLARPVLVFGLIVFLMASMLHHVLMPLAQQQLGHRQNE 135 Query: 136 AQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSI- 194 T L E F + + + + + L+ +F+ D R + IY A + Sbjct: 136 IAQNATSRLLTEGRFLHPSEGVTFYTQEIDDDGVLRDVFLSDRRSVEEGVIYTAAHAYLI 195 Query: 195 -DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNP 253 D +R ++I+ DG R + + ++ F+ ++ + + + + + ++ Sbjct: 196 RDDERTSLIMVDGLAQRLTTATDRLATANFRDFSFDISALVQNDVSQRLDPDKMTTFQLL 255 Query: 254 NPNNPNYRPELLETYRS------EFHKRLTQWLFPVIFGLIS----IVAADKRALVRQRK 303 P + R ET RS FH R+ LF ++ LI ++ R V + Sbjct: 256 TPWDELSR----ETGRSIGKITQSFHARIADPLFCIVAALIGFSTLMIGGFSRFGV--WR 309 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 ++ F+ L G+ S + + ++P P+LYL F + + + M+ Sbjct: 310 EVGVAFVLLVAIDGL---RSTLQSPVRRDPELWPLLYLPTFISALLVIAML 357 >gi|99080790|ref|YP_612944.1| permease YjgP/YjgQ [Ruegeria sp. TM1040] gi|99037070|gb|ABF63682.1| permease YjgP/YjgQ [Ruegeria sp. TM1040] Length = 379 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 49/229 (21%), Positives = 96/229 (41%), Gaps = 2/229 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M ++ Y+L F L +V + W+ + + + + +S+ L+IS +P + Sbjct: 1 MSRYDRYVLSQYLLFFGFFALILVAVFWINRAVSLFDWLIGDGQSVLAFLEISALSLPNL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + MV P T V +N +EL ++ TG+S L +P + +L + + Sbjct: 61 VRMVLPLAAFAATVWVTNRLNSESELTVLRATGSSPWQLARPAMVFGLLSAAMMSALSLF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + ++ A+ +++ L F + + I P+ TLQ +F+ D RD Sbjct: 121 LLPASLAQMQFREAELSRSVSAKLLNAGSFLHPSEGITFFIGSIEPDGTLQNVFLTDQRD 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 Y + + + D +IL DG RK + +S F ++ Sbjct: 181 PSVEITYTSDRAYLVREDDEAHLILVDGLAQRKEAHNDRLSTTAFSDFS 229 >gi|126728787|ref|ZP_01744602.1| Predicted permease [Sagittula stellata E-37] gi|126710717|gb|EBA09768.1| Predicted permease [Sagittula stellata E-37] Length = 376 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 53/211 (25%), Positives = 100/211 (47%), Gaps = 19/211 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ F+ Y+L + F L +V + WV + + + + + S I+L+ + +P V Sbjct: 1 MQRFDRYVLSQLMVLFGFFALVLVSVYWVNRAVVLFDRLINDGHSARIVLEFTALSLPAV 60 Query: 61 LPMVTP---FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 + +V P F A+ TN L+ ++EL ++ TG S L +PVL I++++ + + Sbjct: 61 IALVLPMATFAAAVYVTNRLSG---DSELTVVKATGFSPWRLARPVLVFGIMVTLMMSVL 117 Query: 118 ENIIEPKCRSTIKQLSAKAQ---LALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF 174 +++ P+ ++KQL + Q +++ L E F + I P TLQ + Sbjct: 118 THVLVPQ---SLKQLRMREQELSSSVSARLLREGTFLHPSKGITFYIRDITPEGTLQDVL 174 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILND 205 + D R+ + IY A DR +I +D Sbjct: 175 LSDRREPEREVIYTA-------DRAYLIRDD 198 >gi|254477380|ref|ZP_05090766.1| permease YjgP/YjgQ [Ruegeria sp. R11] gi|214031623|gb|EEB72458.1| permease YjgP/YjgQ [Ruegeria sp. R11] Length = 388 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 50/234 (21%), Positives = 99/234 (42%), Gaps = 2/234 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M ++ Y+L F L +V + W+ + + + + +S + + + +P + Sbjct: 1 MSRYDRYVLSQYLLFFGFFALILVAVFWINRAVVLFDRLIGDGQSALVFFEFTALSLPNL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + MV P + V +N +EL ++ TGTS + KP L I+ +I + I + Sbjct: 61 IRMVLPVAAFASSVWVTNRLNSESELTVLRATGTSPWQMAKPALAFGIITAIMMSILTHF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +T++Q + +T L E F + I + +P+ TL +F+ D R+ Sbjct: 121 LLPTSIATLEQRETEISRNVTAKLLSEGDFLHPTRGVTFYIGRIDPDGTLNDVFLSDRRN 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 Y + D DR +++ DG R ++ +S F ++ S Sbjct: 181 PDQVVTYTGGKAYLVRDEDRTHLVMVDGMSQRIDMQTRRLSSTIFSDFSYDISS 234 >gi|163792838|ref|ZP_02186814.1| Predicted permease [alpha proteobacterium BAL199] gi|159181484|gb|EDP65996.1| Predicted permease [alpha proteobacterium BAL199] Length = 369 Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 74/368 (20%), Positives = 152/368 (41%), Gaps = 22/368 (5%) Query: 6 LYILRCIGRSFLMSCLFIVF----IAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + I R + L + +FIV + W+ Q L+ ++L+ + + + ++ L+PT L Sbjct: 1 MRITRYLAGQILTAMVFIVVSMTCVIWLSQSLRFVDLIVNRGLPIPSFVYLTLMLMPTWL 60 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 +V P T V + + EL+++ G S + L P + +A+ + ++ + Sbjct: 61 SIVLPIAAFAATVFVYNKLTNDRELVVLSAAGLSPLRLAGPAMVVAVATMLATYLMTLYL 120 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P K+L + + L E F + D L + + L GI + D + Sbjct: 121 VPMSYRGFKELQFQIRHNFDHLVLREGEFRSIGDGLTVYVRAREDTGQLAGIVVHDQSNA 180 Query: 182 QTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + A+ G++ + +++ +G + + +S++ F YT+ A + Sbjct: 181 KKTVTLVAERGALITAPEGPRVVMANGSRQERDVETGRVSVLYFDRYTIDL-GAMREEVQ 239 Query: 240 LKANDQNLSF---LLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 DQN F LL+P + P+ + Y +E H+RLT L + I + Sbjct: 240 RTIRDQNELFIDDLLHPTEQITD--PKNFDEYIAEGHQRLTSPLLALSLTAIGVAVLLSG 297 Query: 297 ALVRQRKKIHPIFISL--SISFGVFWGFSYIIHKIEQNPYYIPILYL-----FLFCISSI 349 R+ + I I L + + G Y++ + P +PI++ FL ++S+ Sbjct: 298 EFSRRGQTIRIITAVLLAGCAEAMGLGSKYLVVRY---PSMVPIMWFAVIVPFLLALASM 354 Query: 350 FLLMIKKK 357 +K++ Sbjct: 355 TQRRLKRR 362 >gi|224368912|ref|YP_002603074.1| putative permease [Desulfobacterium autotrophicum HRM2] gi|223691629|gb|ACN14912.1| putative permease [Desulfobacterium autotrophicum HRM2] Length = 359 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 80/331 (24%), Positives = 149/331 (45%), Gaps = 44/331 (13%) Query: 49 LLKISGYL---IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLF 105 L++ GY+ IP + TP + T V + MNRN ELL + +G S L+KPV+ Sbjct: 46 LIQGLGYILLKIPFMFVQFTPAGVVLATIVVFSLMNRNNELLALKGSGVSVYHLLKPVVL 105 Query: 106 LAILLSI-FLFISENIIEPKCRST--IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS 162 + ++L++ +F+ E I+ I+ + K + ++ EN++ R D + I I+ Sbjct: 106 VGVILAMTMIFLGETIVPYTMAKANHIRSSTLKKNKKIYATW--ENIWIR-DGNKIIHIN 162 Query: 163 KYNP-NNTLQGIFIVD-SRDTQTHKIYYAQSGSIDLDRQAI--IL---NDGEVHRKSPIS 215 +NP +N++ GI I D + A++G D + + +L N G+ H + Sbjct: 163 YFNPADNSISGITITSFGADFKIATRVDAENGRFDSGQWQLSNVLEQNNPGDEH-----N 217 Query: 216 KDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLN--PNPNNPNYRPELLETYRSEFH 273 DI K++ L E A+ T+ K + ++ L N Y Y +F Sbjct: 218 ADIQFYDHKAFALDVEPADLKTVAKKTDQMSIQELKAYIHKIENEGYDA---THYIVDFW 274 Query: 274 KRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSY-IIHKIEQN 332 ++ FP+I ++++V A L ++ + L I+ G+ F Y ++H + Sbjct: 275 AKIA---FPIICLVMALVGAGAGMLSAAKEN-----MPLGIALGIGVAFCYWVVHGFCTS 326 Query: 333 PYYIPILYLFL---------FCISSIFLLMI 354 Y ++ FL C+++IFL+ + Sbjct: 327 LGYGGMIPPFLSAWTADLIFICLTTIFLVTV 357 >gi|254510429|ref|ZP_05122496.1| permease YjgP/YjgQ [Rhodobacteraceae bacterium KLH11] gi|221534140|gb|EEE37128.1| permease YjgP/YjgQ [Rhodobacteraceae bacterium KLH11] Length = 379 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 47/184 (25%), Positives = 86/184 (46%), Gaps = 6/184 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y LR + F L +V + W+ + + + V S +S + L+ + +PT+ Sbjct: 1 MSRFDGYFLRQLLVLFGFFTLVLVGVFWITRSVSLFDRVISGGQSAFVFLEFTALTLPTL 60 Query: 61 LPMVTP---FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 + V P F A+ TN L+ R +E+ ++ TG+S L + VL + + + + Sbjct: 61 IRTVMPMAVFAAAVYATNRLS---RESEMTVMLATGSSPWRLARAVLMFGLSAGLMMAVI 117 Query: 118 ENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD 177 + P ++Q A+ +T L E F D + + IS+ + + TL +F+ D Sbjct: 118 SVFLRPASVERLEQRQAEVAGDVTAQLLNEGEFLHPADGVTVYISRIDLDGTLHEVFVSD 177 Query: 178 SRDT 181 RDT Sbjct: 178 RRDT 181 >gi|317493503|ref|ZP_07951924.1| YjgP/YjgQ permease [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918446|gb|EFV39784.1| YjgP/YjgQ permease [Enterobacteriaceae bacterium 9_2_54FAA] Length = 356 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 66/254 (25%), Positives = 109/254 (42%), Gaps = 20/254 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+ I R ++ F++FI + + ++ T +L ++L I Y + Sbjct: 1 MKLIEHYIMAEIRRLVVIIVGFLIFIFASYSAQRYLTEAANGTLALEVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L + ++E+ I G S I L K V+ LAI LSI + + Sbjct: 61 LEMLLPVGLYVSVGVALGQLYTDSEITAISAIGASPIRLYKAVMLLAIPLSILVTLMSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 P + I QL ++Q L S+L +F D I + NP+ N L + I S Sbjct: 121 ARPWAYAQIYQLEQQSQSELDVSHLRAKMFNINDSGRMILSEEINPDSNHLTDVLIYTSS 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +T +Y A++ +V SPI+ + + YTL+ + + S V Sbjct: 181 GNKT-SVYRAKT--------------VDVTNPSPITPSVILHSGTGYTLRHQGTDDSERV 225 Query: 240 LKANDQNLSFLLNP 253 + NL+ L P Sbjct: 226 YR----NLTLDLKP 235 >gi|260427478|ref|ZP_05781457.1| permease YjgP/YjgQ [Citreicella sp. SE45] gi|260421970|gb|EEX15221.1| permease YjgP/YjgQ [Citreicella sp. SE45] Length = 379 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 64/312 (20%), Positives = 120/312 (38%), Gaps = 36/312 (11%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ F+ Y+L + F L +V + W+ + + + + ++ + I L+ + +P V Sbjct: 1 MQRFDRYMLSQLMVVFGFFALVLVMVYWLNRSVGLFDELIANGHTAGIFLEFTLLALPGV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V P V M+ +EL ++ TG S L +PVL ++ + I ++ Sbjct: 61 VAIVLPMAAFGAAVYVTNRMSNESELTVLQATGLSPWRLARPVLVFGAIIGAMMAILSHV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +++ ++ +++ L E F + I P L+ +F+ D RD Sbjct: 121 LVPASIGQLRERESEISGSVSARLLHEGTFLHPTRGVTFYIRDITPEGELRDVFLSDRRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 Y AQS A +L D + +++ + TL+ E ST Sbjct: 181 PDRAIAYTAQS--------AYVLRDDD-------GPKLTMRSGLAQTLRAEDQTLSTTDF 225 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYR--------------------SEFHKRLTQWL 280 + ++S L+ N P R + T+ E H R Q L Sbjct: 226 ENLTYDISGLVTQN-GPPRRRARQISTWELLTDTEAVSEEVKDSVGEVLEEAHMRFEQPL 284 Query: 281 FPVIFGLISIVA 292 V+ LI A Sbjct: 285 LCVVAALIGYAA 296 >gi|89054305|ref|YP_509756.1| permease YjgP/YjgQ [Jannaschia sp. CCS1] gi|88863854|gb|ABD54731.1| permease YjgP/YjgQ [Jannaschia sp. CCS1] Length = 371 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 66/303 (21%), Positives = 122/303 (40%), Gaps = 25/303 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M ++ YILR + F L +V + WV Q + + + + +++ + L+ S +P + Sbjct: 1 MGQYDRYILRQLVALFGFFSLVLVSVYWVNQAARLFDRLIADGQNIGVFLEFSALTLPWI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + T + M +EL+++ G S + L++PV LL+I L + NI Sbjct: 61 VQLILPVSAFVATLYIFNRMISESELVVLQTAGLSALRLLRPVFVFGCLLAILLAVLVNI 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P R Q A+ Q LT +L F L + I + + + +F+ D+ Sbjct: 121 LAPTARGQFTQRQAEVQDDLTGRFLRAGEFIHPAAGLTVYIREISELGEFRDLFLQDAST 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST- 237 Y A + + +++ DG + +S + F +T + + Sbjct: 181 PGVEVTYTANTALLVRSDTGPRLVMFDGVAQTLDLDTGRLSTISFSDFTYSVGTLGGTGA 240 Query: 238 -----------IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFG 286 ++L+AN Q L P L E H RL Q LF + Sbjct: 241 RQIDVRELPTPLLLRANQQIAGALNLP-----------LSHLVFEGHDRLAQSLFVLFVP 289 Query: 287 LIS 289 LI+ Sbjct: 290 LIA 292 >gi|323978945|gb|EGB74025.1| permease YjgP/YjgQ family protein [Escherichia coli TW10509] Length = 356 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 76/286 (26%), Positives = 121/286 (42%), Gaps = 27/286 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSVQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + NN L + I S Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDVLIYTST 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +T +I+ A+ S+D V SP + + +Y L + + + + Sbjct: 181 ANRT-RIFRAR--SVD------------VVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPE---LLETYRSEF---HKRLTQW 279 + NL LNP +PN + + + E RS F H L QW Sbjct: 226 YR----NLQLHLNPLDQSPNVKRKAKSVTELARSAFPADHAEL-QW 266 >gi|86138693|ref|ZP_01057266.1| membrane protein, putative [Roseobacter sp. MED193] gi|85824753|gb|EAQ44955.1| membrane protein, putative [Roseobacter sp. MED193] Length = 387 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 72/303 (23%), Positives = 128/303 (42%), Gaps = 24/303 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y+L F L +V + WV + + + + ++ + L+ + +P + Sbjct: 1 MSRFDRYVLSQYLLFFSFFALILVAVFWVNRAVVLFDRLIGDGQTAIVFLEFTALALPNL 60 Query: 61 LPMVTP---FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 + MV P F A+ TN L S +EL ++ TGTS + +P L ++ ++ + + Sbjct: 61 IRMVLPVAVFASAVWVTNRLQS---ESELTVLRATGTSPWQMARPALAFGVITALMMSVL 117 Query: 118 ENIIEPKCRSTIKQLSAKAQLA---LTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF 174 + + P S+I QL+ + Q +T L E F + I + + N TL +F Sbjct: 118 THFLLP---SSISQLALREQEVSRNVTAKLLTEGHFLHPVKGVTFYIRQIDSNGTLNDVF 174 Query: 175 IVDSRDTQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 + D RD Y + D + +I+ +G R ++ +S F ++ S Sbjct: 175 LSDRRDPNQTMTYTGARAFLVRDGENTHLIMVNGMAQRLEHRTQQLSTTNFSDFSYDISS 234 Query: 233 -ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYR-----SEFHKRLTQWLFPVIFG 286 AN ST ++ + S+ L + N + L E Y EFH R + L V Sbjct: 235 LANQSTAAIRNIREISSWELLQDRENIS----LTEGYSRGALAEEFHLRFARALICVAVA 290 Query: 287 LIS 289 LI Sbjct: 291 LIG 293 >gi|24114288|ref|NP_708798.1| hypothetical protein SF3027 [Shigella flexneri 2a str. 301] gi|30064335|ref|NP_838506.1| hypothetical protein S3228 [Shigella flexneri 2a str. 2457T] gi|24053444|gb|AAN44505.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|30042592|gb|AAP18316.1| hypothetical protein S3228 [Shigella flexneri 2a str. 2457T] gi|281602371|gb|ADA75355.1| putative permease [Shigella flexneri 2002017] gi|313648098|gb|EFS12544.1| hypothetical protein SF2457T_3698 [Shigella flexneri 2a str. 2457T] gi|332752656|gb|EGJ83041.1| hypothetical protein SFK671_3614 [Shigella flexneri K-671] gi|332753042|gb|EGJ83426.1| hypothetical protein SF434370_3221 [Shigella flexneri 4343-70] gi|332765462|gb|EGJ95680.1| hypothetical protein SF293071_3544 [Shigella flexneri 2930-71] gi|332999939|gb|EGK19522.1| hypothetical protein SFK218_4003 [Shigella flexneri K-218] gi|333014895|gb|EGK34240.1| hypothetical protein SFK304_3820 [Shigella flexneri K-304] Length = 356 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 77/286 (26%), Positives = 119/286 (41%), Gaps = 27/286 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + NN L I S Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +T +I+ A GS+D V SP + + +Y L + + + + Sbjct: 181 ANRT-RIFRA--GSVD------------VVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPE---LLETYRSEF---HKRLTQW 279 + NL LNP +PN + + + E RS F H L QW Sbjct: 226 YR----NLQLHLNPLDQSPNVKRKAKSVTELARSAFPADHAEL-QW 266 >gi|259419313|ref|ZP_05743230.1| permease YjgP/YjgQ [Silicibacter sp. TrichCH4B] gi|259345535|gb|EEW57389.1| permease YjgP/YjgQ [Silicibacter sp. TrichCH4B] Length = 379 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 47/229 (20%), Positives = 95/229 (41%), Gaps = 2/229 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M ++ Y+L F L +V + W+ + + + + +S+ L+IS +P + Sbjct: 1 MSRYDRYVLSQYLLFFGFFALILVAVFWINRAVSLFDWLIGDGQSVLAFLEISALSLPNL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + MV P T V +N +EL ++ TG+S L +P + +L + + Sbjct: 61 VRMVLPLAAFAATVWVTNRLNSESELTVLRATGSSPWQLARPAMAFGVLSAAMMSALSLF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + ++ A+ +++ L F + + +P+ TL +F+ D RD Sbjct: 121 LLPASLAQMQLREAELSRSVSAKLLNAGNFLHPSAGITFFVGSIDPDGTLNNVFLTDQRD 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 Y + + + D +IL DG RK + +S F ++ Sbjct: 181 PSVEITYTSDRAYLVREDDMAHLILVDGLAQRKEAHNDRLSTTAFADFS 229 >gi|332754457|gb|EGJ84823.1| hypothetical protein SF274771_3587 [Shigella flexneri 2747-71] Length = 356 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 77/286 (26%), Positives = 119/286 (41%), Gaps = 27/286 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + NN L I S Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +T +I+ A GS+D V SP + + +Y L + + + + Sbjct: 181 ANRT-RIFRA--GSVD------------VVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPE---LLETYRSEF---HKRLTQW 279 + NL LNP +PN + + + E RS F H L QW Sbjct: 226 YR----NLQLHLNPLDQSPNVKRKAKSVTELARSAFPADHAEL-QW 266 >gi|94263395|ref|ZP_01287209.1| permease YjgP/YjgQ [delta proteobacterium MLMS-1] gi|93456231|gb|EAT06365.1| permease YjgP/YjgQ [delta proteobacterium MLMS-1] Length = 400 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 60/277 (21%), Positives = 120/277 (43%), Gaps = 28/277 (10%) Query: 16 FLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTN 75 F + L I + ++ +++ ++ + S L L++ Y+ P++L P M Sbjct: 20 FFAALLVINAVLFLGRLVPMLDEIFSLGVGLGDFLRVVAYITPSMLLFSLPMAAMMAVII 79 Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAK 135 T + + E++ + +G S ++ PV+F +L + + ++ P+ + + QL Sbjct: 80 AFTRLAGDLEIMALKASGISLPRMLPPVVFFGLLTGLMTLATATVLIPRGMTAMDQL--- 136 Query: 136 AQLALTFSYLEENL----FFRLDDDLYIKISKYNPNNTL-QGIFIVDSRDTQTHKIYYAQ 190 + L ++EE + F D+ + + +P+ G+++ D RD AQ Sbjct: 137 -MIHLAKEHIEEGIREKTFSEGLGDVVLYVDDISPDQRFWHGVYLSDLRDKDNPLTISAQ 195 Query: 191 SGSIDLD----RQAIILNDGEVHRKSPISKDISIMKFKSYTLQ------TESANSSTIVL 240 G++ D R + L+DG +HR S +K +I FK Y L+ T + + Sbjct: 196 GGNLRADPAAGRVVLSLSDGSLHR-SAGAKSQTIF-FKHYNLEIPLDSPTLGPPGRSSMT 253 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLT 277 +A + + L P + YR Y E+H+RL Sbjct: 254 QAQLRQRATELGPE-HPRQYR------YIGEYHQRLA 283 >gi|94266927|ref|ZP_01290580.1| permease YjgP/YjgQ [delta proteobacterium MLMS-1] gi|93452379|gb|EAT02998.1| permease YjgP/YjgQ [delta proteobacterium MLMS-1] Length = 400 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 60/277 (21%), Positives = 120/277 (43%), Gaps = 28/277 (10%) Query: 16 FLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTN 75 F + L I + ++ +++ ++ + S L L++ Y+ P++L P M Sbjct: 20 FFAALLVINAVLFLGRLVPMLDEIFSLGVGLGDFLRVVAYITPSMLLFSLPMAAMMAVII 79 Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAK 135 T + + E++ + +G S ++ PV+F +L + + ++ P+ + + QL Sbjct: 80 AFTRLAGDLEIMALKASGISLPRMLPPVVFFGLLTGLMTLATATVLIPRGMTAMDQL--- 136 Query: 136 AQLALTFSYLEENL----FFRLDDDLYIKISKYNPNNTL-QGIFIVDSRDTQTHKIYYAQ 190 + L ++EE + F D+ + + +P+ G+++ D RD AQ Sbjct: 137 -MIHLAKEHIEEGIREKTFSEGLGDVVLYVDDISPDQRFWHGVYLSDLRDKDNPLTISAQ 195 Query: 191 SGSIDLD----RQAIILNDGEVHRKSPISKDISIMKFKSYTLQ------TESANSSTIVL 240 G++ D R + L+DG +HR S +K +I FK Y L+ T + + Sbjct: 196 GGNLRADPAAGRVVLSLSDGSLHR-SAGAKSQTIF-FKHYKLEIPLDSPTLGPPGRSSMT 253 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLT 277 +A + + L P + YR Y E+H+RL Sbjct: 254 QAQLRQRATELGPE-HPRQYR------YIGEYHQRLA 283 >gi|86608831|ref|YP_477593.1| YjgP/YjgQ family protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557373|gb|ABD02330.1| putative membrane protein, YjgP/YjgQ family [Synechococcus sp. JA-2-3B'a(2-13)] Length = 370 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 60/264 (22%), Positives = 112/264 (42%), Gaps = 42/264 (15%) Query: 37 NLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSR 96 LV S L +L ++ +P ++ + P T L ++ N+E+ + G Sbjct: 45 RLVEGSVPPLTVL-RLLVLDLPEMVVLGMPIAAFFATMLTLGKLSGNSEITAMRAAGIPF 103 Query: 97 ITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD 156 + +P+L + + +S+ F N++ P + I+Q+ +A LA + ++ ++FF+ +D+ Sbjct: 104 SRIFRPLLLVGLAMSLSAFFISNVLLPASKQQIRQIDQQALLAQATTPVQYDVFFKTEDN 163 Query: 157 LYIKISKYNPN-NTLQGIFI--VDSRDTQTHKIYYAQSGSIDLDRQAII------LNDGE 207 L+ I + +P NT+Q + I VD +++ + L QA+ L++G Sbjct: 164 LWFFIRQVDPRLNTMQDVTILRVDPLPGGKYQLV-----EVTLAAQAVWNGLEWSLSEGA 218 Query: 208 VHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPN-PNNPNYRPELLE 266 H P I+ F LQ Q+L+ L+ P P + PEL E Sbjct: 219 THLYGPTGLSIAEQTFHRKPLQV-------------SQDLAALMQPPVPPSELSLPELAE 265 Query: 267 -------------TYRSEFHKRLT 277 R+EFH R + Sbjct: 266 RISRLARSNLNTQALRTEFHMRFS 289 >gi|301325676|ref|ZP_07219137.1| conserved hypothetical protein [Escherichia coli MS 78-1] gi|300847531|gb|EFK75291.1| conserved hypothetical protein [Escherichia coli MS 78-1] gi|323966511|gb|EGB61944.1| permease YjgP/YjgQ family protein [Escherichia coli M863] gi|327251764|gb|EGE63450.1| hypothetical protein ECSTEC7V_3616 [Escherichia coli STEC_7v] Length = 356 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 76/286 (26%), Positives = 120/286 (41%), Gaps = 27/286 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + NN L + I S Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDVLIYTST 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +T +I+ A+ S+D V SP + + +Y L + + + + Sbjct: 181 ANRT-RIFRAR--SVD------------VVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPE---LLETYRSEF---HKRLTQW 279 + NL LNP +PN + + + E RS F H L QW Sbjct: 226 YR----NLQLHLNPLDQSPNVKRKAKSVTELARSAFPADHAEL-QW 266 >gi|254488881|ref|ZP_05102086.1| permease YjgP/YjgQ family protein [Roseobacter sp. GAI101] gi|214045750|gb|EEB86388.1| permease YjgP/YjgQ family protein [Roseobacter sp. GAI101] Length = 376 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 71/362 (19%), Positives = 148/362 (40%), Gaps = 13/362 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y+L F L +V I W+ + + + + ++ + L+ + +P + Sbjct: 1 MSKFDRYMLSQFLTLFSFFALVLVAIFWINRAVILFDRLIGDGQTALVFLEFTVLGLPRL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P V+ M +EL ++ TGT L +PV I +++ + + ++ Sbjct: 61 ITTVLPIATFAGAAYVINRMTSESELTVLQATGTGPWRLARPVFAYGICVALMMSVLTHV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P ++ + Q A+ +T L E F + + L+ +F+ D R+ Sbjct: 121 LVPMTKAELNQREAEISQNVTARLLTEGTFLHPTSKVTFYTRLIGNDGVLRDVFLSDRRN 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANSST 237 IY A + + + +I+ DG R K ++ KF+ ++ + ++ST Sbjct: 181 PDEGVIYTAAEAYLVRNGNGTTLIMVDGLAQRLQVEGKQLATAKFRDFSFDISALVSNST 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYR-PELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 ++ D ++F L N ++ + + E + R LF +I +I Sbjct: 241 DESQSIDSMVTFDLLKNWDDLAAKTGQTHGDIAEEVNARFADPLFCIIAAMIGYATLIMG 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFW---GF-SYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 R ++ + I+FG+ GF S ++ + Q+ P+LY+ + + L Sbjct: 301 GFSR-----FGVWREIVIAFGLLIAIDGFSSTLVETVRQDASRWPVLYVPSLVGAMLVLA 355 Query: 353 MI 354 MI Sbjct: 356 MI 357 >gi|108761666|ref|YP_631128.1| hypothetical protein MXAN_2917 [Myxococcus xanthus DK 1622] gi|108465546|gb|ABF90731.1| putative membrane protein [Myxococcus xanthus DK 1622] Length = 370 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 62/310 (20%), Positives = 126/310 (40%), Gaps = 31/310 (10%) Query: 22 FIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMN 81 F+ + +V+Q L+ +++ S+ +L + ++ YL P L M P F + L + Sbjct: 22 FMFLLLFVMQFLRGTDVLLGSSVTLVDMARLLAYLAPHFLMMALPIAFLLAILLGLGRLG 81 Query: 82 RNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALT 141 + EL+ + G + L+ + +A+ LS+ + + + +P + +K L ++ Sbjct: 82 EDRELVALQALGIGPVRLLAAPMGIAVALSVLMLVITSTAQPWGLTGLKVLVSEVIRKNA 141 Query: 142 FSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAI 201 ++ +F+ +L + + + + + + D R+ + + AQ G + Sbjct: 142 VGDVKSGVFYEDLSNLTLYAEQVSADGKWTNVLLHDDREANSPLLVLAQRGQVGTSTSGE 201 Query: 202 IL----NDGEVHRKSPI-SKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPN 256 +L GEVHR + +++ SI++F + A S V + + F + Sbjct: 202 VLRFALEAGEVHRSAGRETEEYSIIRF-------DQAEISVGVGASMGKRSRFSYSREEL 254 Query: 257 NPNYRPELLET-------------YRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 P EL+E YR H RL L P+ F L+ A R RQ Sbjct: 255 TPG---ELMEAAREAEAQGEDARMYRMALHSRLGNALAPIAFALLGTPLAMGR---RQSG 308 Query: 304 KIHPIFISLS 313 + ++L Sbjct: 309 RAWGYLLTLG 318 >gi|84500989|ref|ZP_00999224.1| Predicted permease [Oceanicola batsensis HTCC2597] gi|84391056|gb|EAQ03474.1| Predicted permease [Oceanicola batsensis HTCC2597] Length = 385 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 40/189 (21%), Positives = 87/189 (46%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y+L F L +V I W+ Q ++ + + ++ + L+ + +P V Sbjct: 1 MARFDRYLLSQFMVLFGFFSLVLVSIYWINQAVRLFDALIGDGQTAWVFLEFTALTLPNV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V P V ++ +EL+++ +TG S L +PVL+ +++ + + + + Sbjct: 61 IRIVLPMATFAAVVYVTNRLSSESELVVMQSTGFSPWRLARPVLWFGVIVGLIMSVMSHF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P S +++ + LT L E F + I + + + TL+ +F D RD Sbjct: 121 LVPVSISRLQERQDDLRQDLTARLLTEGSFLHPVAGITFYIRQIDADGTLRDVFFSDRRD 180 Query: 181 TQTHKIYYA 189 ++ + + A Sbjct: 181 ARSPQTFTA 189 >gi|260432791|ref|ZP_05786762.1| permease YjgP/YjgQ [Silicibacter lacuscaerulensis ITI-1157] gi|260416619|gb|EEX09878.1| permease YjgP/YjgQ [Silicibacter lacuscaerulensis ITI-1157] Length = 379 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 65/296 (21%), Positives = 122/296 (41%), Gaps = 29/296 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y LR + F L +V + W+ + + V S +S + L+ + +PT+ Sbjct: 1 MSRFDGYFLRQLLVLFGFFTLVLVGVFWITRSVSLFERVISGGQSAMVFLEFTALTLPTL 60 Query: 61 LPMVTP---FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 + V P F A+ TN L+ R +E+ ++ TG+S L + V+ ++ + + + Sbjct: 61 IRTVMPMAVFAAAVYATNRLS---RESEMTVMLATGSSPWRLSRGVILFGLIAGLMMAVI 117 Query: 118 ENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD 177 ++ P +++ A+ +T L E F + + I + + + TL +F+ D Sbjct: 118 SVVLRPASVEQLERRQAEVAGDVTAQLLNEGEFMHPAPGVTVYIGRIDLDGTLNEVFVSD 177 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAI--ILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 RD Y + S + D + ++ DG R +S +F Q S + Sbjct: 178 RRDRNNPATYSSTSAYLLSDDTGVHLVMVDGVALRLDREGNTLSSTQF-----QDASYDV 232 Query: 236 STIVLKANDQNLSFLLNPNPN----------NPNY-RPELLETYRSEFHKRLTQWL 280 S + K + S P + Y R EL+E E H+R + W+ Sbjct: 233 SELTRKGDIGRRSIEAVPTSELLRDLDAVAASDGYPRGELVE----ELHQRFS-WI 283 >gi|56698597|ref|YP_168974.1| hypothetical protein SPO3780 [Ruegeria pomeroyi DSS-3] gi|56680334|gb|AAV97000.1| membrane protein, putative [Ruegeria pomeroyi DSS-3] Length = 375 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 48/237 (20%), Positives = 104/237 (43%), Gaps = 18/237 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIA----WVIQILQRINLVSSSTESLNILLKISGYL 56 M F+ Y LR L+ C F F+ W+ + + + + SS ++ + L+ + Sbjct: 1 MSKFDGYFLR----QLLVLCGFFAFVLVGVFWISKAVSLFDRLISSGQTAMVALEFTALT 56 Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 +PT++ V P T V +NR +E+ ++ TG+S L +PV+ ++ + L Sbjct: 57 LPTLVRTVMPMAAFCATVYVTNRLNRESEMTVMLATGSSPFRLARPVILFGLVCAAMLAT 116 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + P ++ A+ +T L + F + + I K + + TL +++ Sbjct: 117 ITLYLRPAAMLRLEARQAEVAGDMTAQLLNDGQFMHPVKGVTVYIGKIDRDGTLNDVYLS 176 Query: 177 DSRDTQ------THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 D R + + K + A+SG ++ A+++ +G + + +S F+ ++ Sbjct: 177 DRRAPERVVTYTSSKAFLARSG----EQIALVMVEGTALQMETGRRTLSTTVFRDFS 229 >gi|258591111|emb|CBE67406.1| putative Permease YjgP/YjgQ family protein [NC10 bacterium 'Dutch sediment'] Length = 426 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 70/331 (21%), Positives = 147/331 (44%), Gaps = 28/331 (8%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 ++LR + SF + F+ + Q+++ ++L+ + + ++L++ Y++P + P Sbjct: 36 HLLREMAASFALGLGTFTFVLLMDQMMRLMDLIINKGAPVGVVLRLISYILPFSFTVTIP 95 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKP-VLFLAILLSIFLFISENIIEPKC 125 + ++ E +++ +G S L+ P VLF + L+IS +++P Sbjct: 96 MSVLLAVLATYGRVSSEGEAIVLKTSGLSLYRLMAPGVLFGVVATFATLWIS-TLVQPSS 154 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDTQTH 184 K L+ + + LE +F L I + + + TL GI ++D R+ Sbjct: 155 TKAFKTLTHQLYHTHVLTALENGIFNTEYPGLAIYVDRSEKTDGTLHGILVIDQRNQADQ 214 Query: 185 KIYYAQSGSI---DLDRQAII---LNDGEVHRKSPISKD-ISIMKFKSYTLQ--TESANS 235 ++ AQ G + D + +A I L+ G + S D + F++Y LQ T + Sbjct: 215 RLIIAQEGKLLNKDDETEAPIGLQLSRGTLQISSRDHPDRYRNLDFETYDLQILTGGTVA 274 Query: 236 STI--VLKANDQNLSFLLNP----NPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 T+ V ++ + N+ L N + P + E HK+ + P+ ++S Sbjct: 275 ETVARVRQSKEMNIGELRTEIARLNKDGGKAWP-----LQVELHKKFS---LPIACLILS 326 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFW 320 ++ A +R +K + ++LS++F VF+ Sbjct: 327 MIGAP--LAMRIKKAGRGVSLALSVAFAVFY 355 >gi|215488306|ref|YP_002330737.1| predicted permease [Escherichia coli O127:H6 str. E2348/69] gi|215266378|emb|CAS10815.1| predicted permease [Escherichia coli O127:H6 str. E2348/69] Length = 356 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 76/286 (26%), Positives = 119/286 (41%), Gaps = 27/286 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + NN L I S Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKQFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +T +I+ A+ S+D V SP + + +Y L + + + + Sbjct: 181 ANRT-RIFRAR--SVD------------VVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPE---LLETYRSEF---HKRLTQW 279 + NL LNP +PN + + + E RS F H L QW Sbjct: 226 YR----NLQLHLNPLDQSPNVKRKAKSVTELARSAFPADHAEL-QW 266 >gi|300824070|ref|ZP_07104191.1| conserved hypothetical protein [Escherichia coli MS 119-7] gi|331669797|ref|ZP_08370642.1| putative permease [Escherichia coli TA271] gi|331679054|ref|ZP_08379726.1| putative permease [Escherichia coli H591] gi|300523460|gb|EFK44529.1| conserved hypothetical protein [Escherichia coli MS 119-7] gi|324119792|gb|EGC13672.1| permease YjgP/YjgQ family protein [Escherichia coli E1167] gi|331062710|gb|EGI34624.1| putative permease [Escherichia coli TA271] gi|331073119|gb|EGI44442.1| putative permease [Escherichia coli H591] Length = 356 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 76/286 (26%), Positives = 119/286 (41%), Gaps = 27/286 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + NN L I S Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +T +I+ A+ S+D V SP + + +Y L + + + + Sbjct: 181 ANRT-RIFRAR--SVD------------VVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPE---LLETYRSEF---HKRLTQW 279 + NL LNP +PN + + + E RS F H L QW Sbjct: 226 YR----NLQLHLNPLDQSPNVKRKAKSVTELARSAFPADHAEL-QW 266 >gi|222054621|ref|YP_002536983.1| permease YjgP/YjgQ family protein [Geobacter sp. FRC-32] gi|221563910|gb|ACM19882.1| permease YjgP/YjgQ family protein [Geobacter sp. FRC-32] Length = 389 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 65/291 (22%), Positives = 129/291 (44%), Gaps = 10/291 (3%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 YI + I F + F+ + ++L+ ++V + L +L++ YL+P+ L + P Sbjct: 8 YIFKEIPPPFFLGVATFTFVLLMGRLLRLTDMVVTKGVPLGDVLRMILYLLPSFLLVTIP 67 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIF-LFISENIIEPKC 125 F + ++ ++E++ + +G S L+ PV LA++ + FI+ + PK Sbjct: 68 MAFLLAILLAFGRLSGDSEIIAMKASGISLYGLLPPVFSLAVITYLAGAFITIYAV-PKG 126 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDTQTH 184 S K L ++E +F + I Y+ + GI I D RD Sbjct: 127 NSAFKDLLVTVVENRVSLGVKEKVFNGDFPGIVIYCDGYDERTQVMSGIIIQDERDPLEP 186 Query: 185 KIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 A G+I+ D + + L G +HR + + +++F Y L + +S V Sbjct: 187 STIMAGHGTINADHASRSVRLHLASGSIHRTAG-REGYRLVQFSDYDLHINLSQASQAV- 244 Query: 241 KANDQNLSFL-LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 K +++++S L N N+ ++ + R E+H+R + +IF L+ + Sbjct: 245 KRDERDMSLAELRTNWNSNHFDNKGRLEMRLEYHRRFSLPFACLIFTLVGM 295 >gi|332998925|gb|EGK18516.1| hypothetical protein SFVA6_3890 [Shigella flexneri VA-6] Length = 356 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 76/286 (26%), Positives = 119/286 (41%), Gaps = 27/286 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + NN L I S Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +T +I+ A+ S+D V SP + + +Y L + + + + Sbjct: 181 ANRT-RIFRAR--SVD------------VVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPE---LLETYRSEF---HKRLTQW 279 + NL LNP +PN + + + E RS F H L QW Sbjct: 226 YR----NLQLHLNPLDQSPNVKRKAKSVTELARSAFPADHAEL-QW 266 >gi|331674536|ref|ZP_08375296.1| putative permease [Escherichia coli TA280] gi|331068630|gb|EGI40025.1| putative permease [Escherichia coli TA280] Length = 356 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 76/286 (26%), Positives = 119/286 (41%), Gaps = 27/286 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + NN L I S Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +T +I+ A+ S+D V SP + + +Y L + + + + Sbjct: 181 ANRT-RIFRAR--SVD------------VVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPE---LLETYRSEF---HKRLTQW 279 + NL LNP +PN + + + E RS F H L QW Sbjct: 226 YR----NLQLHLNPLDQSPNVKRKAKSVTELARSAFPADHAEL-QW 266 >gi|194426331|ref|ZP_03058886.1| putative permease, YjgP/YjgQ family [Escherichia coli B171] gi|194415639|gb|EDX31906.1| putative permease, YjgP/YjgQ family [Escherichia coli B171] gi|195183223|dbj|BAG66768.1| putative permease [Escherichia coli O111:H-] Length = 356 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 76/286 (26%), Positives = 120/286 (41%), Gaps = 27/286 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSSQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + + NN L I S Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILLQTVDQDNNRLTDALIYTST 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +T +I+ A+ S+D V SP + + +Y L + + + + Sbjct: 181 ANRT-RIFRAR--SVD------------VVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPE---LLETYRSEF---HKRLTQW 279 + NL LNP +PN + + + E RS F H L QW Sbjct: 226 YR----NLQLHLNPLDQSPNVKRKAKSVTELARSVFPADHAEL-QW 266 >gi|110643219|ref|YP_670949.1| putative permease [Escherichia coli 536] gi|170683865|ref|YP_001745245.1| YjgP/YjgQ permease [Escherichia coli SMS-3-5] gi|194436786|ref|ZP_03068886.1| putative permease, YjgP/YjgQ family [Escherichia coli 101-1] gi|218706607|ref|YP_002414126.1| hypothetical protein ECUMN_3464 [Escherichia coli UMN026] gi|256024434|ref|ZP_05438299.1| hypothetical protein E4_13749 [Escherichia sp. 4_1_40B] gi|293406597|ref|ZP_06650523.1| conserved hypothetical protein [Escherichia coli FVEC1412] gi|298382336|ref|ZP_06991933.1| conserved hypothetical protein [Escherichia coli FVEC1302] gi|300900317|ref|ZP_07118496.1| conserved hypothetical protein [Escherichia coli MS 198-1] gi|312968688|ref|ZP_07782897.1| conserved hypothetical protein [Escherichia coli 2362-75] gi|331684626|ref|ZP_08385218.1| putative permease [Escherichia coli H299] gi|110344811|gb|ABG71048.1| putative permease [Escherichia coli 536] gi|170521583|gb|ACB19761.1| putative permease, YjgP/YjgQ family [Escherichia coli SMS-3-5] gi|194424268|gb|EDX40255.1| putative permease, YjgP/YjgQ family [Escherichia coli 101-1] gi|218433704|emb|CAR14621.1| conserved hypothetical protein; putative membrane protein [Escherichia coli UMN026] gi|291426603|gb|EFE99635.1| conserved hypothetical protein [Escherichia coli FVEC1412] gi|298277476|gb|EFI18992.1| conserved hypothetical protein [Escherichia coli FVEC1302] gi|300356207|gb|EFJ72077.1| conserved hypothetical protein [Escherichia coli MS 198-1] gi|312286906|gb|EFR14817.1| conserved hypothetical protein [Escherichia coli 2362-75] gi|331078241|gb|EGI49447.1| putative permease [Escherichia coli H299] Length = 356 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 76/286 (26%), Positives = 119/286 (41%), Gaps = 27/286 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + NN L I S Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +T +I+ A+ S+D V SP + + +Y L + + + + Sbjct: 181 ANRT-RIFRAR--SVD------------VVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPE---LLETYRSEF---HKRLTQW 279 + NL LNP +PN + + + E RS F H L QW Sbjct: 226 YR----NLQLHLNPLDQSPNVKRKAKSVTELARSAFPADHAEL-QW 266 >gi|119356768|ref|YP_911412.1| permease YjgP/YjgQ family protein [Chlorobium phaeobacteroides DSM 266] gi|119354117|gb|ABL64988.1| permease YjgP/YjgQ family protein [Chlorobium phaeobacteroides DSM 266] Length = 442 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 55/214 (25%), Positives = 92/214 (42%), Gaps = 15/214 (7%) Query: 46 LNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLF 105 L +++ S +++ +PM M +M +E+ I +G S L+ PVL Sbjct: 50 LELVVVQSAWMVSFTIPMAVLIAVVM----AFGAMTNASEITIFRASGISLYRLMAPVLL 105 Query: 106 LAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN 165 A LLS+ N++ P+ K L A + L EN F L D I + + + Sbjct: 106 AATLLSLVAERFNNVVLPEANYKAKSLMADIVKSKPVFGLTENAFSTLIDGYSILVRQTD 165 Query: 166 PN-NTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQ----AIILNDGEVHR-KSPISKDIS 219 P ++GI I D I A+SG ++ I L +GE+H + P K+ Sbjct: 166 PETGAIRGIVIYDFTRPDFRTIVTAESGGVNFSSDYHYLIITLENGEIHEIQQPQHKEYR 225 Query: 220 IMKFKSYTLQTESAN-----SSTIVLKANDQNLS 248 M FK + ES+ S ++++D++LS Sbjct: 226 KMSFKKHRFVFESSGFGFNRSVESAIRSDDRDLS 259 >gi|157804262|ref|YP_001492811.1| hypothetical protein A1E_05575 [Rickettsia canadensis str. McKiel] gi|157785525|gb|ABV74026.1| hypothetical protein A1E_05575 [Rickettsia canadensis str. McKiel] Length = 360 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 46/236 (19%), Positives = 114/236 (48%), Gaps = 4/236 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M +E Y ++ I ++ + I W+ Q+L+ + L + ++ + ++PT+ Sbjct: 1 MLLYEKYFIKNILPLLIVVTFSVTSIVWITQVLKLLYLFDKGIKVMD-FFSLIVLVLPTL 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + + ++ +++I+ +G + L P L++A+++ + + + Sbjct: 60 LFILLPVITVIAVIYIYNNLKVERQIIILQASGVHNVQLALPALYVALIVMLLAYYISST 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P +K + + S +EE F ++ D+ + I K + N + G+ I D+R+ Sbjct: 120 IMPLSHINLKSRLSFIKNNYISSMIEEKTFNKVTKDITVFIDKKSAGNIMNGVIIFDNRN 179 Query: 181 TQTHKIYYAQSGSIDL-DRQAII-LNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + +A SG++++ D I LN G + ++ I+ +++ + F S ++ ++ N Sbjct: 180 ADNLSVVFADSGTLNIYDNSPIFELNKG-LRQEHDINGNLTQLTFNSLMIKLQNDN 234 >gi|193067274|ref|ZP_03048242.1| putative permease, YjgP/YjgQ family [Escherichia coli E110019] gi|209920456|ref|YP_002294540.1| hypothetical protein ECSE_3265 [Escherichia coli SE11] gi|218555554|ref|YP_002388467.1| hypothetical protein ECIAI1_3129 [Escherichia coli IAI1] gi|218696689|ref|YP_002404356.1| hypothetical protein EC55989_3396 [Escherichia coli 55989] gi|260857120|ref|YP_003231011.1| hypothetical protein ECO26_4088 [Escherichia coli O26:H11 str. 11368] gi|260869742|ref|YP_003236144.1| hypothetical protein ECO111_3809 [Escherichia coli O111:H- str. 11128] gi|293449328|ref|ZP_06663749.1| hypothetical protein ECCG_02359 [Escherichia coli B088] gi|300815538|ref|ZP_07095762.1| conserved hypothetical protein [Escherichia coli MS 107-1] gi|192959231|gb|EDV89666.1| putative permease, YjgP/YjgQ family [Escherichia coli E110019] gi|209913715|dbj|BAG78789.1| conserved hypothetical protein [Escherichia coli SE11] gi|218353421|emb|CAU99487.1| conserved hypothetical protein; putative membrane protein [Escherichia coli 55989] gi|218362322|emb|CAQ99944.1| conserved hypothetical protein; putative membrane protein [Escherichia coli IAI1] gi|257755769|dbj|BAI27271.1| conserved predicted membrane protein [Escherichia coli O26:H11 str. 11368] gi|257766098|dbj|BAI37593.1| conserved predicted membrane protein [Escherichia coli O111:H- str. 11128] gi|291322418|gb|EFE61847.1| hypothetical protein ECCG_02359 [Escherichia coli B088] gi|300531467|gb|EFK52529.1| conserved hypothetical protein [Escherichia coli MS 107-1] gi|320201894|gb|EFW76469.1| Permease Ygh-P1, YjgP/YjgQ family [Escherichia coli EC4100B] gi|323173775|gb|EFZ59404.1| hypothetical protein ECLT68_2093 [Escherichia coli LT-68] gi|323178689|gb|EFZ64265.1| hypothetical protein ECOK1180_2421 [Escherichia coli 1180] gi|323183569|gb|EFZ68966.1| hypothetical protein ECOK1357_3349 [Escherichia coli 1357] gi|323946693|gb|EGB42714.1| YjgP/YjgQ permease [Escherichia coli H120] gi|324018177|gb|EGB87396.1| hypothetical protein HMPREF9542_03232 [Escherichia coli MS 117-3] Length = 356 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 76/286 (26%), Positives = 119/286 (41%), Gaps = 27/286 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + NN L I S Sbjct: 121 GRPWAYTQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +T +I+ A+ S+D V SP + + +Y L + + + + Sbjct: 181 ANRT-RIFRAR--SVD------------VVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPE---LLETYRSEF---HKRLTQW 279 + NL LNP +PN + + + E RS F H L QW Sbjct: 226 YR----NLQLHLNPLDQSPNVKRKAKSVTELARSAFPADHAEL-QW 266 >gi|310816137|ref|YP_003964101.1| putative permease, YjgP/YjgQ family [Ketogulonicigenium vulgare Y25] gi|308754872|gb|ADO42801.1| putative permease, YjgP/YjgQ family [Ketogulonicigenium vulgare Y25] Length = 379 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 56/284 (19%), Positives = 123/284 (43%), Gaps = 10/284 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y+L + F L ++ + WV + + + + S + + + ++ + +P + Sbjct: 1 MGRFDRYLLSQLMTLFGFFSLVLIMVYWVNRAVALFDQLISDGQGMWVFVEFTALSLPAI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V P + + V ++ +EL+++ +TG S +++ V+ ++ + + I ++ Sbjct: 61 IKLVLPLSAFVASVYVANRLSGESELVVVQSTGFSPARVMRAVMVFGLIAVVMVQILAHV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + A+ T L F + + I P LQ +F+ DSR Sbjct: 121 LVPLSNQRLNIRQAEVTQTATARILRAGEFMTPIAGVTLYIRSITPEGELQDVFLSDSRA 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFK--SYTLQT--ESAN 234 + IY A I +A +++ DG + S ++ +S F +Y L + S + Sbjct: 181 SLADTIYTASRAYIVRTERAPQLVMVDGSIQNLSHQTERMSFTTFSDFAYDLSSILPSVD 240 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQ 278 + + L+ N L LL + + + R+E H RL++ Sbjct: 241 PAALSLR-NATTLQLLLARDEMTLLFGA---DNIRTEIHDRLSE 280 >gi|294678216|ref|YP_003578831.1| permease YjgP/YjgQ family protein [Rhodobacter capsulatus SB 1003] gi|294477036|gb|ADE86424.1| permease YjgP/YjgQ family protein [Rhodobacter capsulatus SB 1003] Length = 376 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 57/286 (19%), Positives = 121/286 (42%), Gaps = 12/286 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y+L + F L +V + WV + + + + ++ ++L+ + +P V Sbjct: 1 MKRLDRYLLSQLMAIFGFFALVLVSVYWVNRAVLLFDKLIGDGQTAWVVLEFTALTLPKV 60 Query: 61 LPMVTPFC-FAMETTNVLTSMNR---NTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 + +V P FA VL ++NR +EL+++ + G S L +PV ++++ + Sbjct: 61 ISLVLPVAAFA----AVLYAINRLSGESELVVMQSAGASPWRLARPVAVFGLIVAALMLA 116 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + + P R+ + + A+ +T +L E F + + I + + L IF+ Sbjct: 117 LVHELVPASRARLAERQAQVSQDVTARFLTEGSFQTPTAGITVYIREISDLGELLDIFLY 176 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 D+R + IY A+ I +++ DG P +++ +F +T A Sbjct: 177 DARGQRAETIYTAEKALIVPSEAGPKLVMFDGTAQTLRPSDGSLALTRFSDFTYDLGGAI 236 Query: 235 SSTIVLKANDQNLSF--LLNPNPNNPNYRPELLETYRSEFHKRLTQ 278 + + + + + + L+ P P + E + RL Q Sbjct: 237 GTGLRGRIDWEEVPSRDLIAPGPELLAATGSTVAAAHLELNDRLAQ 282 >gi|291514071|emb|CBK63281.1| Predicted permeases [Alistipes shahii WAL 8301] Length = 500 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 63/256 (24%), Positives = 123/256 (48%), Gaps = 20/256 (7%) Query: 8 ILRCIGRSFLMSCL---FIVFIAWVIQILQR-INLVSSSTESLNILLKISGYLIPTVLPM 63 I R + +S+L + FIV ++ I+ R I+ + S I++++ Y + ++PM Sbjct: 4 IHRLVLKSYLGPMVLTFFIVMFVLMMNIVWRYIDELVGKGLSAGIIIELMTYFMANMIPM 63 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIF-LFISENII- 121 P + + ++ N ELL + + G S + + KP++ L L+S+ FI N++ Sbjct: 64 GLPLSMLLAAIMTMGNLGENYELLAMKSAGMSLVQITKPLIILVSLVSVGSFFIGNNLVP 123 Query: 122 --EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDS 178 K ST+ + + Q AL F ++ LFF D++ I++S P+ + L + I D+ Sbjct: 124 NANKKLFSTLYDIRQQKQ-ALEF---QDGLFFNGIDNMSIRVSHQEPDTHLLHDVLIYDN 179 Query: 179 RDTQTH-KIYYAQSGSIDL--DRQAIILN--DGEVHRKSPISK--DISIMKFKSYTLQTE 231 R + A SG I L D++ +++ GE + ++ S+ S ++ ++ LQ + Sbjct: 180 RAANGNMNTIVADSGYIRLSDDKKYLLVTLFHGETYEQTRNSQWFTKSALRHHTFDLQKQ 239 Query: 232 SANSSTIVLKANDQNL 247 S + D +L Sbjct: 240 VIPMSGFAMGRTDADL 255 >gi|254418640|ref|ZP_05032364.1| putative permease, YjgP/YjgQ family [Brevundimonas sp. BAL3] gi|196184817|gb|EDX79793.1| putative permease, YjgP/YjgQ family [Brevundimonas sp. BAL3] Length = 397 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 66/289 (22%), Positives = 119/289 (41%), Gaps = 14/289 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+ R I + +C + I + Q L ++ ++ +S+ +++K++ +P + Sbjct: 20 MTLIQRYLFRQISLPVVAACASLAGIGILSQSLDQLEVIVERGQSVWVMVKLTLLALPQL 79 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + LT M R EL G +R +I P LA L+ I + Sbjct: 80 LAVILPIGLFVGALIALTRMQREQELTAAFAGGMTRWQVISPAARLAFLVLILNLVMTLF 139 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV--DS 178 +P + + + + L +EE F + D L + + + N L+ +F+ D Sbjct: 140 AQPWAQREARNQAFAIRTDLAALLVEEGQFVQGPDGLTVYVQQIEQNGLLKNLFVYLDDG 199 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDI-SIMKFKSYT--LQTESANS 235 + TQ A+ G + + + DG + S S+ + + F Y L S + Sbjct: 200 KSTQNWSAAEARFGRDAANEPVLTMIDGSWQKYS--SRGVLETLSFDRYDFPLGQFSGVT 257 Query: 236 STIVLKANDQNLSFLLNPNP---NNPNYRPELLETYRSEFHKRLTQWLF 281 I K D L LL P+P R ELL +E H R+ L+ Sbjct: 258 EQIRYKPADLYLRQLLTPSPRVLETAGSRGELL----AEAHARIAAPLY 302 >gi|222034703|emb|CAP77445.1| hypothetical protein LF82_488 [Escherichia coli LF82] gi|312947541|gb|ADR28368.1| hypothetical protein NRG857_14790 [Escherichia coli O83:H1 str. NRG 857C] Length = 356 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 76/286 (26%), Positives = 118/286 (41%), Gaps = 27/286 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYASVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + NN L I S Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +T +I+ A+ S+D V SP + + +Y L + + + + Sbjct: 181 ANRT-RIFRAR--SVD------------VVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPE---LLETYRSEF---HKRLTQW 279 + NL LNP +PN + + + E RS F H L QW Sbjct: 226 YR----NLQLHLNPLDQSPNVKRKAKSVTELARSAFPADHAEL-QW 266 >gi|320195130|gb|EFW69759.1| Permease Ygh-P1, YjgP/YjgQ family [Escherichia coli WV_060327] Length = 356 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 76/286 (26%), Positives = 120/286 (41%), Gaps = 27/286 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P +L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYASVGVMLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + NN L I S Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +T +I+ A+ S+D V SP + + +Y L+ + + + + Sbjct: 181 ANRT-RIFRAR--SVD------------VVDPSPEKPTVMLHNGTAYLLEHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPE---LLETYRSEF---HKRLTQW 279 + NL LNP +PN + + + E RS F H L QW Sbjct: 226 YR----NLQLHLNPLDQSPNVKRKAKSVTELARSVFPADHAEL-QW 266 >gi|254437787|ref|ZP_05051281.1| putative permease, YjgP/YjgQ family [Octadecabacter antarcticus 307] gi|198253233|gb|EDY77547.1| putative permease, YjgP/YjgQ family [Octadecabacter antarcticus 307] Length = 379 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 40/189 (21%), Positives = 87/189 (46%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y+L + F L +V I W+ + ++ + + + +S + L+++ +P+V Sbjct: 1 MARFDRYMLSQLLVLFGFFSLILVVIYWINRAVRLFDRLIADGQSAWVFLELTSLSLPSV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V P + V M+ ++EL ++ TG S L +P+++ ++++ + + +I Sbjct: 61 IRIVLPLSAFVAAVYVTNRMSSDSELTVVQATGYSPFRLARPIIYFGLIVAALMSVLTHI 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + ++ +T L F DD+ I + P+ + IFI +S D Sbjct: 121 LVPLSTEQLTSRQSEISQTMTARLLTPGEFLTPSDDVTFYIRELTPSGEMLDIFISESTD 180 Query: 181 TQTHKIYYA 189 Y A Sbjct: 181 PTRRTTYTA 189 >gi|42523904|ref|NP_969284.1| YjgP/YjgQ permease [Bdellovibrio bacteriovorus HD100] gi|39576111|emb|CAE80277.1| predicted permease YjgP/YjgQ family [Bdellovibrio bacteriovorus HD100] Length = 367 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 63/284 (22%), Positives = 124/284 (43%), Gaps = 12/284 (4%) Query: 15 SFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETT 74 SF++ L V I + Q+L+ ++ + +I GY+I ++LP++ P Sbjct: 20 SFILGLLVFVSIILMFQVLRLTEFALVHGVAMKTIAEIIGYVIISMLPILFPMALLFSVL 79 Query: 75 NVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSA 134 +++++E++ + +G TL+ P L LA L+ + I P + L + Sbjct: 80 LTYGRLSQDSEIVAMKASGLPMGTLLLPALILATLVGVISAQMSFNIAPWGNRQFEVLYS 139 Query: 135 KAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSRDTQTHKIYYAQSGS 193 + + ++E F D+ I ++ N + L+ +FI D ++ A++G Sbjct: 140 RLANTKAAAIIKEGTFAEGFFDMVIYANEVNTDKGLLKKVFIYDEKNGDVPLTIIAKAGE 199 Query: 194 I--DLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQ-TESANSSTIVLKANDQN 246 I D R + LN GE+HR++ IS F +Y ++ +E N Sbjct: 200 IVPDPTRPGHEILLQLNQGEIHRQAKTHTKIS---FDTYDVRFSEPQNIEEKAKSPPSLT 256 Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 L + N + + E+ T +SE+HKR + ++F +I + Sbjct: 257 LEEVRNRLKEDIKDK-EVRRTLQSEYHKRWAISVLCIVFAMIGV 299 >gi|34581065|ref|ZP_00142545.1| hypothetical protein [Rickettsia sibirica 246] gi|28262450|gb|EAA25954.1| unknown [Rickettsia sibirica 246] Length = 338 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 46/212 (21%), Positives = 107/212 (50%), Gaps = 6/212 (2%) Query: 26 IAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTE 85 I W+ QIL+ + L + ++ + ++PT+L ++ P + + ++ + Sbjct: 4 IVWITQILKLLYLFDKGIKVMD-FFSLIVLVLPTLLFILLPVIMVITVIYIYNNLKVERQ 62 Query: 86 LLIIDNTGTSRITLIKPVLFLAILLSIFLF-ISENIIEPKCRSTIKQLSAKAQLALTFSY 144 L+I+ +G + + L P L++A+++ + + IS NI+ P +K + S Sbjct: 63 LIILQTSGVNNVQLALPALYVALIVMLLAYYISSNIL-PLSHINLKSRLNFIKNNYISSM 121 Query: 145 LEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDL-DRQAII- 202 +EE F ++ D+ + I K + N + G+ I D+R+ + +A SG++++ D I Sbjct: 122 IEEKTFNKVTKDITVFIDKKSAGNIMNGVIIFDNRNADNPSVVFAGSGTLNIYDNSPIFE 181 Query: 203 LNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 LN G + ++ ++ +++ + F S ++ ++ N Sbjct: 182 LNKG-IRQEYDVNGNLTQLTFDSLMIKLQNDN 212 >gi|83953614|ref|ZP_00962335.1| membrane protein, putative [Sulfitobacter sp. NAS-14.1] gi|83841559|gb|EAP80728.1| membrane protein, putative [Sulfitobacter sp. NAS-14.1] Length = 376 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 50/238 (21%), Positives = 99/238 (41%), Gaps = 2/238 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y+L F L +V I W+ + + + + ++ + L+ + +P + Sbjct: 1 MAKFDRYMLSQFLILFSFFALILVAIFWINRAVVLFDRLIGDGQTALVFLEFTVLGLPKL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + V+ M +EL ++ TGTS L +PV + ++I + + ++ Sbjct: 61 ITTVLPIATFAGSVYVINRMTSESELTVLQATGTSPWRLARPVFVYGLCVAIMMSVLTHL 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A+ +T L E F + + + L+ +F+ D R+ Sbjct: 121 LLPLSNGQLSEREAEISQNVTARLLTEGTFLHPTSKVTFYTRVIDADGVLRDVFLSDRRN 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 IY A + + D +I+ DG R K +S KF+ ++ S SS Sbjct: 181 PDESVIYTASEAYLIRNGDGTTLIMVDGMAQRLEMAGKRLSTAKFRDFSFDISSLVSS 238 >gi|229587242|ref|YP_002845743.1| Putative permease [Rickettsia africae ESF-5] gi|228022292|gb|ACP54000.1| Putative permease [Rickettsia africae ESF-5] Length = 369 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 46/212 (21%), Positives = 107/212 (50%), Gaps = 6/212 (2%) Query: 26 IAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTE 85 I W+ QIL+ + L + ++ + ++PT+L ++ P + + ++ + Sbjct: 35 IVWITQILKLLYLFDKGIKVMD-FFSLIVLVLPTLLFILLPVIMVITVIYIYNNLKVERQ 93 Query: 86 LLIIDNTGTSRITLIKPVLFLAILLSIFLF-ISENIIEPKCRSTIKQLSAKAQLALTFSY 144 L+I+ +G + + L P L++A+++ + + IS NI+ P +K + S Sbjct: 94 LIILQTSGVNNVQLALPALYVALIVMLLAYYISSNIL-PLSHINLKSRLNFIKNNYISSM 152 Query: 145 LEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDL-DRQAII- 202 +EE F ++ D+ + I K + N + G+ I D+R+ + +A SG++++ D I Sbjct: 153 IEEKTFNKVTKDITVFIDKKSAGNIMNGVIIFDNRNADNPSVVFAGSGTLNIYDNSPIFE 212 Query: 203 LNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 LN G + ++ ++ +++ + F S ++ ++ N Sbjct: 213 LNKG-IRQEYDVNGNLTQLTFDSLIIKLQNDN 243 >gi|157829182|ref|YP_001495424.1| hypothetical protein A1G_07385 [Rickettsia rickettsii str. 'Sheila Smith'] gi|157801663|gb|ABV76916.1| hypothetical protein A1G_07385 [Rickettsia rickettsii str. 'Sheila Smith'] Length = 338 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 43/211 (20%), Positives = 104/211 (49%), Gaps = 4/211 (1%) Query: 26 IAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTE 85 I W+ QIL+ + L + ++ + ++PT+L ++ P + + ++ + Sbjct: 4 IVWITQILKLLYLFDKGIKVMD-FFSLIVLVLPTLLFILLPVIMVITVIYIYNNLKVERQ 62 Query: 86 LLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYL 145 L+I+ +G + + L P L++A+++ + + + I P +K + S + Sbjct: 63 LIILQASGVNNVQLALPALYVALIVMLLAYYISSTILPLSHINLKSRLNFIKNNYISSMI 122 Query: 146 EENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDL-DRQAII-L 203 EE F ++ D+ + I K + N + G+ I D+R+ + +A SG++++ D I L Sbjct: 123 EEKTFNKVTKDITVFIDKKSAGNIMNGVIIFDNRNADNPSVVFAGSGTLNIYDNSPIFEL 182 Query: 204 NDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 N G + ++ ++ +++ + F S ++ ++ N Sbjct: 183 NKG-IRQEYDVNGNLTQLTFDSLMIKLQNDN 212 >gi|165933910|ref|YP_001650699.1| hypothetical protein RrIowa_1576 [Rickettsia rickettsii str. Iowa] gi|165908997|gb|ABY73293.1| hypothetical protein RrIowa_1576 [Rickettsia rickettsii str. Iowa] Length = 369 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 43/211 (20%), Positives = 104/211 (49%), Gaps = 4/211 (1%) Query: 26 IAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTE 85 I W+ QIL+ + L + ++ + ++PT+L ++ P + + ++ + Sbjct: 35 IVWITQILKLLYLFDKGIKVMD-FFSLIVLVLPTLLFILLPVIMVITVIYIYNNLKVERQ 93 Query: 86 LLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYL 145 L+I+ +G + + L P L++A+++ + + + I P +K + S + Sbjct: 94 LIILQASGVNNVQLALPALYVALIVMLLAYYISSTILPLSHINLKSRLNFIKNNYISSMI 153 Query: 146 EENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDL-DRQAII-L 203 EE F ++ D+ + I K + N + G+ I D+R+ + +A SG++++ D I L Sbjct: 154 EEKTFNKVTKDITVFIDKKSAGNIMNGVIIFDNRNADNPSVVFAGSGTLNIYDNSPIFEL 213 Query: 204 NDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 N G + ++ ++ +++ + F S ++ ++ N Sbjct: 214 NKG-IRQEYDVNGNLTQLTFDSLMIKLQNDN 243 >gi|51246435|ref|YP_066319.1| hypothetical protein DP2583 [Desulfotalea psychrophila LSv54] gi|50877472|emb|CAG37312.1| hypothetical protein DP2583 [Desulfotalea psychrophila LSv54] Length = 351 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 67/294 (22%), Positives = 120/294 (40%), Gaps = 17/294 (5%) Query: 46 LNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLF 105 L IL S P + P + T + ++ + ELL + G S ++ PV Sbjct: 4 LQILSAYSPTSFPNIFLYTLPMASMLGITICFSRLSTDMELLALKAGGISIYKILPPVFL 63 Query: 106 LAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN 165 +A +++ F + P +K+LS + ++ + F D+ I + K + Sbjct: 64 VASAITLIAFYFSTQLIPASELAMKKLSYQILKEKIDQGIQAHKFTDAMGDIVIYVDKVD 123 Query: 166 PN-NTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQ----AIILNDGEVHRKSPISKDISI 220 +++ D R + I A+SGS+ + + I L DG +HR P + I Sbjct: 124 KETGDWHNVWVSDMRGVKQPTITMARSGSMKSNSKQMSITIKLTDGSLHR--PEEQGTEI 181 Query: 221 MKFKSYTLQT--ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQ 278 + FK YT+ E+ + +L ++ LL N + Y EFHKRL Sbjct: 182 ITFKDYTINMPLETGGKNIFMLHKRLLSMPELLEQAKRWGNESKKRGRIYLIEFHKRL-- 239 Query: 279 WLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN 332 + P+ ++S +A R KK I + + G+F + YI+H + + Sbjct: 240 -ILPIGCLMLSFLALPLGLQARPGKKA----IGIPVGLGIFIVY-YILHTVGKE 287 >gi|15893268|ref|NP_360982.1| hypothetical protein RC1345 [Rickettsia conorii str. Malish 7] gi|15620488|gb|AAL03883.1| unknown [Rickettsia conorii str. Malish 7] Length = 378 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 46/212 (21%), Positives = 107/212 (50%), Gaps = 6/212 (2%) Query: 26 IAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTE 85 I W+ QIL+ + L + ++ + ++PT+L ++ P + + ++ + Sbjct: 44 IVWITQILKLLYLFDKGIKVMD-FFSLIVLVLPTLLFILLPVIMVITVIYIYNNLKVERQ 102 Query: 86 LLIIDNTGTSRITLIKPVLFLAILLSIFLF-ISENIIEPKCRSTIKQLSAKAQLALTFSY 144 L+I+ +G + + L P L++A+++ + + IS NI+ P +K + S Sbjct: 103 LIILQASGVNNVQLALPALYVALIVMLLAYYISSNIL-PLSHINLKSRLNFIKNNYISSM 161 Query: 145 LEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDL-DRQAII- 202 +EE F ++ D+ + I K + N + G+ I D+R+ + +A SG++++ D I Sbjct: 162 IEEKTFNKVTKDITVFIDKKSAGNIMNGVIIFDNRNADNPSVVFAGSGTLNIYDNSPIFE 221 Query: 203 LNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 LN G + ++ ++ +++ + F S ++ ++ N Sbjct: 222 LNKG-IRQEYDVNGNLTQLTFDSLMIKLQNDN 252 >gi|293416425|ref|ZP_06659064.1| permease YjgP/YjgQ family protein [Escherichia coli B185] gi|291431781|gb|EFF04764.1| permease YjgP/YjgQ family protein [Escherichia coli B185] Length = 356 Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 76/286 (26%), Positives = 119/286 (41%), Gaps = 27/286 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + NN L I S Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +T +I+ A+ S+D V SP + + +Y L + + + + Sbjct: 181 ANRT-RIFRAR--SVD------------VVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPE---LLETYRSEF---HKRLTQW 279 + NL LNP +PN + + + E RS F H L QW Sbjct: 226 YR----NLQLHLNPLDQSPNVKRKAKSVTELARSVFPADHAEL-QW 266 >gi|291284363|ref|YP_003501181.1| Permease YjgP/YjgQ family protein precursor [Escherichia coli O55:H7 str. CB9615] gi|301017325|ref|ZP_07182089.1| conserved hypothetical protein [Escherichia coli MS 69-1] gi|331654591|ref|ZP_08355591.1| putative permease [Escherichia coli M718] gi|331664594|ref|ZP_08365500.1| putative permease [Escherichia coli TA143] gi|290764236|gb|ADD58197.1| Permease YjgP/YjgQ family protein precursor [Escherichia coli O55:H7 str. CB9615] gi|300400298|gb|EFJ83836.1| conserved hypothetical protein [Escherichia coli MS 69-1] gi|320656364|gb|EFX24271.1| Permease YjgP/YjgQ family protein precursor [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661735|gb|EFX29143.1| Permease YjgP/YjgQ family protein precursor [Escherichia coli O55:H7 str. USDA 5905] gi|320666886|gb|EFX33862.1| Permease YjgP/YjgQ family protein precursor [Escherichia coli O157:H7 str. LSU-61] gi|331047973|gb|EGI20050.1| putative permease [Escherichia coli M718] gi|331058525|gb|EGI30506.1| putative permease [Escherichia coli TA143] Length = 356 Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 76/286 (26%), Positives = 119/286 (41%), Gaps = 27/286 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + NN L I S Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +T +I+ A+ S+D V SP + + +Y L + + + + Sbjct: 181 ANRT-RIFRAR--SVD------------VVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPE---LLETYRSEF---HKRLTQW 279 + NL LNP +PN + + + E RS F H L QW Sbjct: 226 YR----NLQLHLNPLDQSPNVKRKAKSVTELARSVFPADHAEL-QW 266 >gi|297569343|ref|YP_003690687.1| permease YjgP/YjgQ family protein [Desulfurivibrio alkaliphilus AHT2] gi|296925258|gb|ADH86068.1| permease YjgP/YjgQ family protein [Desulfurivibrio alkaliphilus AHT2] Length = 398 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 53/264 (20%), Positives = 101/264 (38%), Gaps = 20/264 (7%) Query: 23 IVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNR 82 I+F+ +I +L I + L +I Y+ P +L P M T MN Sbjct: 30 ILFLGRLIPLLDEIFALGLG---LGDFARICLYMSPRLLLFSLPMACMMGVIIAFTRMNG 86 Query: 83 NTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTF 142 + E++ + +G ++ PVL L + ++ ++ ++ PK QL Sbjct: 87 DYEIMALKASGIGLYRMLPPVLLLGAVTALLTLVTATVLIPKSTIATNQLFWHLAKTKVE 146 Query: 143 SYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLD----R 198 + N F + + + + P+N +G+++ D RD A G + D R Sbjct: 147 QGVRPNTFSEGLPQVVLYVEEVTPDNAWRGVYLSDLRDPDHPVTVMAPDGQLQADTAGSR 206 Query: 199 QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLS------FLLN 252 + L+DG +HR + + + F Y L+ + + ++ Sbjct: 207 IMLTLHDGTMHRA--VQEKTQTIHFGRYHLEIPLTPPAAFADRTGRHGMTQDELRQTAAK 264 Query: 253 PNPNNPNYRPELLETYRSEFHKRL 276 P + Y+ TY E+H+RL Sbjct: 265 LGPEHSRYK-----TYLIEYHQRL 283 >gi|331648771|ref|ZP_08349859.1| putative permease [Escherichia coli M605] gi|330909041|gb|EGH37555.1| permease Ygh-P1, YjgP/YjgQ family [Escherichia coli AA86] gi|331042518|gb|EGI14660.1| putative permease [Escherichia coli M605] Length = 356 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 76/286 (26%), Positives = 119/286 (41%), Gaps = 27/286 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + NN L I S Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +T +I+ A+ S+D V SP + + +Y L + + + + Sbjct: 181 ANRT-RIFRAR--SVD------------VVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPE---LLETYRSEF---HKRLTQW 279 + NL LNP +PN + + + E RS F H L QW Sbjct: 226 YR----NLQLHLNPLDQSPNVKRKAKSVTELARSVFPADHAEL-QW 266 >gi|157162460|ref|YP_001459778.1| YjgP/YjgQ permease [Escherichia coli HS] gi|157068140|gb|ABV07395.1| putative permease, YjgP/YjgQ family [Escherichia coli HS] Length = 356 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 76/286 (26%), Positives = 119/286 (41%), Gaps = 27/286 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSSQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + NN L I S Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTKDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +T +I+ A+ S+D V SP + + +Y L + + + + Sbjct: 181 ANRT-RIFRAR--SVD------------VVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPE---LLETYRSEF---HKRLTQW 279 + NL LNP +PN + + + E RS F H L QW Sbjct: 226 YR----NLQLHLNPLDQSPNVKRKAKSVTELARSVFPADHAEL-QW 266 >gi|323188590|gb|EFZ73875.1| hypothetical protein ECRN5871_3009 [Escherichia coli RN587/1] gi|324005417|gb|EGB74636.1| hypothetical protein HMPREF9532_04927 [Escherichia coli MS 57-2] Length = 356 Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 76/286 (26%), Positives = 118/286 (41%), Gaps = 27/286 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYASVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + NN L I S Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +T +I+ A+ S+D V SP + + +Y L + + + + Sbjct: 181 ANRT-RIFRAR--SVD------------VVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPE---LLETYRSEF---HKRLTQW 279 + NL LNP +PN + + + E RS F H L QW Sbjct: 226 YR----NLQLHLNPLDQSPNVKRKAKSVTELARSVFPADHAEL-QW 266 >gi|300931864|ref|ZP_07147161.1| conserved hypothetical protein [Escherichia coli MS 187-1] gi|300460287|gb|EFK23780.1| conserved hypothetical protein [Escherichia coli MS 187-1] Length = 353 Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 74/283 (26%), Positives = 116/283 (40%), Gaps = 24/283 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + NN L I S Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +T +I+ A+ S+D V SP + + +Y L + + + + Sbjct: 181 ANRT-RIFRAR--SVD------------VVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEF---HKRLTQW 279 + NL L+ +PN + E RS F H L QW Sbjct: 226 YR----NLQLPLDQSPNVKRKAKSVTELARSAFPADHAEL-QW 263 >gi|218701755|ref|YP_002409384.1| hypothetical protein ECIAI39_3475 [Escherichia coli IAI39] gi|227887687|ref|ZP_04005492.1| inner membrane protein [Escherichia coli 83972] gi|301019930|ref|ZP_07184065.1| conserved hypothetical protein [Escherichia coli MS 196-1] gi|218371741|emb|CAR19592.1| conserved hypothetical protein; putative membrane protein [Escherichia coli IAI39] gi|227835083|gb|EEJ45549.1| inner membrane protein [Escherichia coli 83972] gi|299882028|gb|EFI90239.1| conserved hypothetical protein [Escherichia coli MS 196-1] gi|307555075|gb|ADN47850.1| putative permease [Escherichia coli ABU 83972] Length = 356 Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 75/286 (26%), Positives = 119/286 (41%), Gaps = 27/286 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G + L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGNPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + NN L I S Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +T +I+ A+ S+D V SP + + +Y L + + + + Sbjct: 181 ANRT-RIFRAR--SVD------------VVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPE---LLETYRSEF---HKRLTQW 279 + NL LNP +PN + + + E RS F H L QW Sbjct: 226 YR----NLQLHLNPLDQSPNVKRKAKSVTELARSAFPADHAEL-QW 266 >gi|300973446|ref|ZP_07172202.1| conserved hypothetical protein [Escherichia coli MS 45-1] gi|300410788|gb|EFJ94326.1| conserved hypothetical protein [Escherichia coli MS 45-1] gi|315291260|gb|EFU50620.1| conserved hypothetical protein [Escherichia coli MS 153-1] Length = 356 Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 76/286 (26%), Positives = 118/286 (41%), Gaps = 27/286 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYASVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + NN L I S Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +T +I+ A+ S+D V SP + + +Y L + + + + Sbjct: 181 ANRT-RIFRAR--SVD------------VVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPE---LLETYRSEF---HKRLTQW 279 + NL LNP +PN + + + E RS F H L QW Sbjct: 226 YR----NLQLHLNPLDQSPNVKRKAKSVTELARSVFPADHAEL-QW 266 >gi|300905893|ref|ZP_07123626.1| hypothetical protein HMPREF9536_03885 [Escherichia coli MS 84-1] gi|301304161|ref|ZP_07210277.1| hypothetical protein HMPREF9347_02761 [Escherichia coli MS 124-1] gi|307310385|ref|ZP_07590033.1| permease YjgP/YjgQ family protein [Escherichia coli W] gi|300402362|gb|EFJ85900.1| hypothetical protein HMPREF9536_03885 [Escherichia coli MS 84-1] gi|300840574|gb|EFK68334.1| hypothetical protein HMPREF9347_02761 [Escherichia coli MS 124-1] gi|306909280|gb|EFN39775.1| permease YjgP/YjgQ family protein [Escherichia coli W] gi|315062299|gb|ADT76626.1| permease YjgP/YjgQ family protein [Escherichia coli W] gi|315256879|gb|EFU36847.1| putative permease [Escherichia coli MS 85-1] gi|323377116|gb|ADX49384.1| permease YjgP/YjgQ family protein [Escherichia coli KO11] Length = 356 Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 76/286 (26%), Positives = 119/286 (41%), Gaps = 27/286 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + NN L I S Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +T +I+ A+ S+D V SP + + +Y L + + + + Sbjct: 181 ANRT-RIFRAR--SVD------------VVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPE---LLETYRSEF---HKRLTQW 279 + NL LNP +PN + + + E RS F H L QW Sbjct: 226 YR----NLQLHLNPLVQSPNVKRKAKSVTELARSVFPADHAEL-QW 266 >gi|254453241|ref|ZP_05066678.1| permease YjgP/YjgQ family protein [Octadecabacter antarcticus 238] gi|198267647|gb|EDY91917.1| permease YjgP/YjgQ family protein [Octadecabacter antarcticus 238] Length = 372 Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 56/279 (20%), Positives = 120/279 (43%), Gaps = 8/279 (2%) Query: 20 CLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTS 79 L +V I W+ + ++ + + + +S + L+++ +P+++ +V P + V Sbjct: 13 SLILVLIYWINRAVRLFDRLIADGQSAWVFLELTSLSLPSLIRIVLPLSAFVAAVYVTNR 72 Query: 80 MNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLA 139 M+ ++EL ++ TG S L +PV+ +++++ + I NI+ P ST + ++ +A++A Sbjct: 73 MSSDSELTVVQATGYSPFRLARPVIVFGVIVAVLMSILTNILVPL--STERLITRQAEIA 130 Query: 140 --LTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLD 197 +T L F DD+ I + P + IFI +S Y A + Sbjct: 131 QTMTARLLTPGEFLTPTDDVTFYIRELPPGGEMLDIFISESTSPTQRTTYTASRAYLVRT 190 Query: 198 RQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLS--FLLNP 253 +++ DG + + + +F+ + + + V K + LS LL P Sbjct: 191 ENGPQLVMVDGLTQTLNLETSRLLTTRFEDFVYNVSALMNDDPVRKTSVNGLSTMALLRP 250 Query: 254 NPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + + + + H R+ Q + GL+ A Sbjct: 251 SAETIADTNQTGDQLKLRGHDRIAQAALGFVAGLVGFSA 289 >gi|193062108|ref|ZP_03043204.1| putative permease, YjgP/YjgQ family [Escherichia coli E22] gi|192932328|gb|EDV84926.1| putative permease, YjgP/YjgQ family [Escherichia coli E22] Length = 356 Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 76/286 (26%), Positives = 119/286 (41%), Gaps = 27/286 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSSQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + NN L I S Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +T +I+ A+ S+D V SP + + +Y L + + + + Sbjct: 181 ANRT-RIFRAR--SVD------------VVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPE---LLETYRSEF---HKRLTQW 279 + NL LNP +PN + + + E RS F H L QW Sbjct: 226 YR----NLQLHLNPLDQSPNVKRKAKSVTELARSVFPADHAEL-QW 266 >gi|91212394|ref|YP_542380.1| hypothetical protein UTI89_C3402 [Escherichia coli UTI89] gi|117625286|ref|YP_854458.1| putative permease [Escherichia coli APEC O1] gi|218560055|ref|YP_002392968.1| hypothetical protein ECS88_3362 [Escherichia coli S88] gi|218691271|ref|YP_002399483.1| hypothetical protein ECED1_3630 [Escherichia coli ED1a] gi|237706273|ref|ZP_04536754.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|91073968|gb|ABE08849.1| hypothetical protein UTI89_C3402 [Escherichia coli UTI89] gi|115514410|gb|ABJ02485.1| putative permease [Escherichia coli APEC O1] gi|218366824|emb|CAR04594.1| conserved hypothetical protein; putative membrane protein [Escherichia coli S88] gi|218428835|emb|CAR09636.1| conserved hypothetical protein; putative membrane protein [Escherichia coli ED1a] gi|226899313|gb|EEH85572.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|294492595|gb|ADE91351.1| putative permease, YjgP/YjgQ family [Escherichia coli IHE3034] gi|307625416|gb|ADN69720.1| hypothetical protein UM146_01455 [Escherichia coli UM146] gi|315288787|gb|EFU48185.1| conserved hypothetical protein [Escherichia coli MS 110-3] gi|323951497|gb|EGB47372.1| permease YjgP/YjgQ family protein [Escherichia coli H252] gi|323957869|gb|EGB53583.1| permease YjgP/YjgQ family protein [Escherichia coli H263] Length = 356 Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 76/286 (26%), Positives = 118/286 (41%), Gaps = 27/286 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYASVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + NN L I S Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +T +I+ A+ S+D V SP + + +Y L + + + + Sbjct: 181 ANRT-RIFRAR--SVD------------VVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPE---LLETYRSEF---HKRLTQW 279 + NL LNP +PN + + + E RS F H L QW Sbjct: 226 YR----NLQLHLNPLDQSPNVKRKAKSVTELARSVFPADHAEL-QW 266 >gi|329114705|ref|ZP_08243463.1| Permease YjgP/YjgQ Family Protein [Acetobacter pomorum DM001] gi|326695971|gb|EGE47654.1| Permease YjgP/YjgQ Family Protein [Acetobacter pomorum DM001] Length = 411 Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 79/346 (22%), Positives = 154/346 (44%), Gaps = 44/346 (12%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQ-ILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + Y++ + FL++ L +V IA +++ +L NL+++ + I + + L+P L Sbjct: 34 TLDRYLIAQVMPPFLVA-LSVVMIALILERLLVLFNLLAAGNNHIGIFIGLLAALLPHYL 92 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + V+ M++N E+ I+++G S + + +P + L ++L I F+ I Sbjct: 93 GLAIPAALCVAVFTVIRRMSQNEEIDAINSSGLSLLRITRPYIQLGVILGILSFLLYGFI 152 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSRD 180 +P R + A L+ +F L I K + + + L+ +FI D + Sbjct: 153 QPHARYDFRSTFYIASHTGWAPRLQPRMFASPSSQLTIVADKVSQSGSDLENVFIRDLSE 212 Query: 181 TQTHKIYYAQSG-----------SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ 229 Q I A++G IDL I+ + G+ P S++ F T Sbjct: 213 QQERDI-TARNGHIRIGLDGETVEIDLTHGVIVTDKGD---GVP-----SLVTFDHSTRY 263 Query: 230 -TESANSSTIVLKANDQN-------LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLF 281 T +++ S + D+ + L+ +P+ RP + RSE H R+ + L Sbjct: 264 LTHASHVSPFRTRGEDERELTSPELVGRLIRHDPS--ISRPHM----RSEVHFRMARSL- 316 Query: 282 PVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH 327 I ++AA AL+R+R++ + L ++F + GF +II Sbjct: 317 --TVPFIPLLAASL-ALMRKRQRNN---AGLPLAFIIMVGFDHIIQ 356 >gi|326405101|ref|YP_004285183.1| permease YjgP/YjgQ family protein [Acidiphilium multivorum AIU301] gi|325051963|dbj|BAJ82301.1| permease YjgP/YjgQ family protein [Acidiphilium multivorum AIU301] Length = 374 Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 46/220 (20%), Positives = 97/220 (44%), Gaps = 2/220 (0%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y+ R + +S L +V + W+ Q L+ I L+ S + L ++G L+P+ + ++ P Sbjct: 13 YVFRQLLIGLAVSTLGLVALVWLTQSLRFIQLIIQHGLSPVVFLHLTGLLVPSFVAVILP 72 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + V + + EL ++ +G S + +P L LA+L + + + P Sbjct: 73 ITCFIVILFVYARLAADRELTVMRASGMSDAAIARPALALAMLTMLACWGLNVWLVPSTL 132 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 + + + + LE +F + + + + + + + L GI I D+R Sbjct: 133 ARFTHFESIIRNQVAAFLLEPGVFTPIPGHITVYVQRRDHDQVLHGIVIQDARQKGEPAT 192 Query: 187 YYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFK 224 A+SG + D ++L DG + P + ++I+ F+ Sbjct: 193 ILARSGRLIDGPDGPEVLLLDGSREQVDPKTGRLNILSFR 232 >gi|83942394|ref|ZP_00954855.1| membrane protein, putative [Sulfitobacter sp. EE-36] gi|83846487|gb|EAP84363.1| membrane protein, putative [Sulfitobacter sp. EE-36] Length = 376 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 49/238 (20%), Positives = 99/238 (41%), Gaps = 2/238 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y+L F L +V I W+ + + + + ++ + L+ + +P + Sbjct: 1 MAKFDRYMLSQFLILFSFFALILVAIFWINRAVVLFDRLIGDGQTALVFLEFTVLGLPKL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + V+ M +EL ++ TGTS L +PV + ++I + + ++ Sbjct: 61 ITTVLPIATFAGSVYVINRMTSESELTVLQATGTSPWRLARPVFVYGLCVAIMMSVLTHL 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A+ +T L E F + + + L+ +F+ D R+ Sbjct: 121 LLPLSNGQLSEREAEISQNVTARLLTEGTFLHPTSKVTFYTRVIDADGVLRDVFLSDRRN 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 IY A + + D +I+ DG R K +S KF+ ++ + SS Sbjct: 181 PDEGVIYTASEAYLIRNGDGTTLIMVDGMAQRLEMAGKRLSTAKFRDFSFDISALVSS 238 >gi|188494208|ref|ZP_03001478.1| putative permease, YjgP/YjgQ family [Escherichia coli 53638] gi|188489407|gb|EDU64510.1| putative permease, YjgP/YjgQ family [Escherichia coli 53638] Length = 356 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 76/286 (26%), Positives = 119/286 (41%), Gaps = 27/286 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSSQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + NN L I S Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +T +I+ A+ S+D V SP + + +Y L + + + + Sbjct: 181 ANRT-RIFRAR--SVD------------VVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPE---LLETYRSEF---HKRLTQW 279 + NL LNP +PN + + + E RS F H L QW Sbjct: 226 YR----NLQLHLNPLDQSPNVKRKAKSVTELARSVFPADHAEL-QW 266 >gi|148261611|ref|YP_001235738.1| permease YjgP/YjgQ family protein [Acidiphilium cryptum JF-5] gi|146403292|gb|ABQ31819.1| permease YjgP/YjgQ family protein [Acidiphilium cryptum JF-5] Length = 386 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 46/220 (20%), Positives = 97/220 (44%), Gaps = 2/220 (0%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y+ R + +S L +V + W+ Q L+ I L+ S + L ++G L+P+ + ++ P Sbjct: 25 YVFRQLLIGLAVSTLGLVALVWLTQSLRFIQLIIQHGLSPVVFLHLTGLLVPSFVAVILP 84 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + V + + EL ++ +G S + +P L LA+L + + + P Sbjct: 85 ITCFIVILFVYARLAADRELTVMRASGMSDAAIARPALALAMLTMLACWGLNVWLVPSTL 144 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 + + + + LE +F + + + + + + + L GI I D+R Sbjct: 145 ARFTHFESIIRNQVAAFLLEPGVFTPIPGHITVYVQRRDHDQVLHGIVIQDARQKGEPAT 204 Query: 187 YYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFK 224 A+SG + D ++L DG + P + ++I+ F+ Sbjct: 205 ILARSGRLIDGPDGPEVLLLDGSREQVDPKTGRLNILSFR 244 >gi|26249548|ref|NP_755588.1| hypothetical protein c3717 [Escherichia coli CFT073] gi|170018761|ref|YP_001723715.1| permease YjgP/YjgQ family protein [Escherichia coli ATCC 8739] gi|254162934|ref|YP_003046042.1| hypothetical protein ECB_02856 [Escherichia coli B str. REL606] gi|300916913|ref|ZP_07133616.1| conserved hypothetical protein [Escherichia coli MS 115-1] gi|300923637|ref|ZP_07139665.1| hypothetical protein HMPREF9548_01830 [Escherichia coli MS 182-1] gi|300950816|ref|ZP_07164702.1| conserved hypothetical protein [Escherichia coli MS 116-1] gi|300958361|ref|ZP_07170502.1| hypothetical protein HMPREF9547_04075 [Escherichia coli MS 175-1] gi|301643654|ref|ZP_07243695.1| conserved hypothetical protein [Escherichia coli MS 146-1] gi|307139670|ref|ZP_07499026.1| hypothetical protein EcolH7_16283 [Escherichia coli H736] gi|312972759|ref|ZP_07786932.1| conserved hypothetical protein [Escherichia coli 1827-70] gi|331643681|ref|ZP_08344812.1| putative permease [Escherichia coli H736] gi|26109956|gb|AAN82161.1|AE016766_249 Hypothetical protein c3717 [Escherichia coli CFT073] gi|169753689|gb|ACA76388.1| permease YjgP/YjgQ family protein [Escherichia coli ATCC 8739] gi|242378536|emb|CAQ33322.1| ybl136 [Escherichia coli BL21(DE3)] gi|253974835|gb|ACT40506.1| conserved hypothetical protein [Escherichia coli B str. REL606] gi|253978990|gb|ACT44660.1| conserved hypothetical protein [Escherichia coli BL21(DE3)] gi|284923007|emb|CBG36099.1| putative permease [Escherichia coli 042] gi|300314945|gb|EFJ64729.1| hypothetical protein HMPREF9547_04075 [Escherichia coli MS 175-1] gi|300415883|gb|EFJ99193.1| conserved hypothetical protein [Escherichia coli MS 115-1] gi|300420078|gb|EFK03389.1| hypothetical protein HMPREF9548_01830 [Escherichia coli MS 182-1] gi|300449911|gb|EFK13531.1| conserved hypothetical protein [Escherichia coli MS 116-1] gi|301078038|gb|EFK92844.1| conserved hypothetical protein [Escherichia coli MS 146-1] gi|309703416|emb|CBJ02755.1| putative permease [Escherichia coli ETEC H10407] gi|310332701|gb|EFP99914.1| conserved hypothetical protein [Escherichia coli 1827-70] gi|323936015|gb|EGB32310.1| permease YjgP/YjgQ family protein [Escherichia coli E1520] gi|323941918|gb|EGB38097.1| permease YjgP/YjgQ family protein [Escherichia coli E482] gi|331037152|gb|EGI09376.1| putative permease [Escherichia coli H736] gi|332344939|gb|AEE58273.1| conserved hypothetical protein [Escherichia coli UMNK88] Length = 356 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 75/286 (26%), Positives = 119/286 (41%), Gaps = 27/286 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + NN L I S Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +T +I+ A+ S+D V SP + + +Y + + + + + Sbjct: 181 ANRT-RIFRAR--SVD------------VVDPSPEKPTVMLHNGTAYLIDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPE---LLETYRSEF---HKRLTQW 279 + NL LNP +PN + + + E RS F H L QW Sbjct: 226 YR----NLQLHLNPLDQSPNVKRKAKSVTELARSVFPADHAEL-QW 266 >gi|238651117|ref|YP_002916975.1| hypothetical protein RPR_07620 [Rickettsia peacockii str. Rustic] gi|238625215|gb|ACR47921.1| hypothetical protein RPR_07620 [Rickettsia peacockii str. Rustic] Length = 369 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 46/212 (21%), Positives = 107/212 (50%), Gaps = 6/212 (2%) Query: 26 IAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTE 85 I W+ QIL+ + L + ++ + ++PT+L ++ P + + ++ + Sbjct: 35 IVWITQILKLLYLFDKGIKVMD-FFSLIVLVLPTLLFILLPVITVITVIYIYNNLKVERQ 93 Query: 86 LLIIDNTGTSRITLIKPVLFLAILLSIFLF-ISENIIEPKCRSTIKQLSAKAQLALTFSY 144 L+I+ +G + + L P L++A+++ + + IS NI+ P +K + S Sbjct: 94 LIILQASGVNNVQLALPALYVALIVMLLAYYISSNIL-PLSHINLKSRLNFIKNNYISSM 152 Query: 145 LEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDL-DRQAII- 202 +EE F ++ D+ + I K + N + G+ I D+R+ + +A SG++++ D I Sbjct: 153 IEEKTFNKVTKDITVFIDKKSAGNIMNGVIIFDNRNADNPSVVFASSGTLNIYDNSPIFE 212 Query: 203 LNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 LN G + ++ ++ +++ + F S ++ ++ N Sbjct: 213 LNKG-IRQEYDVNGNLTQLTFDSLMIKLQNDN 243 >gi|157826358|ref|YP_001494078.1| hypothetical protein A1C_06735 [Rickettsia akari str. Hartford] gi|157800316|gb|ABV75570.1| hypothetical protein A1C_06735 [Rickettsia akari str. Hartford] Length = 360 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 43/211 (20%), Positives = 104/211 (49%), Gaps = 4/211 (1%) Query: 26 IAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTE 85 I W+ QIL+ + L + ++ + ++PT+L ++ P + + ++ + Sbjct: 26 IVWITQILKLLYLFDKGIKVMD-FFNLIVLVLPTLLFILLPVITVIAIIYIYNNLKVERQ 84 Query: 86 LLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYL 145 L+I+ +G + + L P L++A+++ + + + I P +K + S + Sbjct: 85 LIILQASGVNNVQLALPALYVALIVMLLAYYISSTIMPLSHINLKSHLNFIKNNYISSMI 144 Query: 146 EENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDL-DRQAII-L 203 EE F ++ D+ + I K + N + G+ I D+R+ + +A SG++++ D I L Sbjct: 145 EEKTFNKVTKDITVFIDKKSAGNIMNGVIIFDNRNADNPSVVFAGSGTLNIYDNNPIFEL 204 Query: 204 NDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 N G + ++ ++ +++ + F S ++ ++ N Sbjct: 205 NKG-LRQEYDVNGNLTQLTFDSLMIKLQNDN 234 >gi|197105168|ref|YP_002130545.1| hypothetical protein PHZ_c1705 [Phenylobacterium zucineum HLK1] gi|196478588|gb|ACG78116.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1] Length = 378 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 57/296 (19%), Positives = 128/296 (43%), Gaps = 6/296 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + Y+LR + +++ L + +A + Q L ++L+ + +S + LK++ +P + Sbjct: 1 MRLIDRYLLRQLLGPVILATLALTGVALLSQTLSGLDLIVNQRQSALVFLKVTLLAMPQL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + MV P + L ++ E+++ G SR +I P + LA ++ + Sbjct: 61 INMVLPIAVFVAALVALNRLHTEQEIVVCFAGGMSRWRVISPAIRLACTVAFLALLMNLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 ++P +++ + + L + + E F L + + L+ +FI RD Sbjct: 121 VQPAAYREMRRELFQVRTDLASTLVREGEFTEPAPGLTVYAQGVDGAGNLENLFIHQMRD 180 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + Y A+ G + R +++ +G S + ++ + F Y + SS Sbjct: 181 DGSATTYTAEQGRVGRSQGRPVLVMRNGSNQEFSS-TGVLNYLTFDEYIFDLSALTSSDE 239 Query: 239 VL--KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 ++ K +D+ L P+ R L+ +E H R++ L+ + F +++ A Sbjct: 240 LVHYKPSDRYPHELFFPDLQQDWERRNRLDLL-AEGHARISSPLYNIAFMAMALSA 294 >gi|157156628|ref|YP_001464444.1| YjgP/YjgQ permease [Escherichia coli E24377A] gi|256019096|ref|ZP_05432961.1| hypothetical protein ShiD9_09279 [Shigella sp. D9] gi|332280199|ref|ZP_08392612.1| YjgP/YjgQ permease [Shigella sp. D9] gi|157078658|gb|ABV18366.1| putative permease, YjgP/YjgQ family [Escherichia coli E24377A] gi|332102551|gb|EGJ05897.1| YjgP/YjgQ permease [Shigella sp. D9] Length = 356 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 75/286 (26%), Positives = 118/286 (41%), Gaps = 27/286 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + NN L I S Sbjct: 121 GRPWAYTQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +T +I+ A+ S+D V SP + + +Y L + + + + Sbjct: 181 ANRT-RIFRAR--SVD------------VVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPE---LLETYRSEF---HKRLTQW 279 + NL L P +PN + + + E RS F H L QW Sbjct: 226 YR----NLQLHLKPLDQSPNVKRKAKSVTELARSAFPADHAEL-QW 266 >gi|329890121|ref|ZP_08268464.1| hypothetical protein BDIM_18180 [Brevundimonas diminuta ATCC 11568] gi|328845422|gb|EGF94986.1| hypothetical protein BDIM_18180 [Brevundimonas diminuta ATCC 11568] Length = 342 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 51/250 (20%), Positives = 112/250 (44%), Gaps = 15/250 (6%) Query: 36 INLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS 95 + ++ +S+ +++K++ +P ++ ++ P + LT + R EL G S Sbjct: 1 MEVIVERGQSVWVMVKLTLLALPQLIAVILPIGLFVGALIALTRLQREQELTAAYAAGVS 60 Query: 96 RITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD 155 R LI+P L +A+++++ + ++P + ++ + + L +EE F + D Sbjct: 61 RWALIRPALQIALIVTVISLLVNVFVQPWAQREGRRQAFAIRTDLAALLVEEGRFVQGPD 120 Query: 156 DLYIKISKYNPNNTLQGIFIV--DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSP 213 L + + + N ++ +F+ + + T A+ G +D + + +G + R S Sbjct: 121 GLTVYVQQIEQNGLMKNLFVYLDNGKTVTTWDAETARFGRVD-GLPVLTMQNGSMQRYS- 178 Query: 214 ISKDI-SIMKF--KSYTLQTESANSSTIVLKANDQNLSFLLNPNP---NNPNYRPELLET 267 S+++ + + F + + L + S I K +D L+ L +P P R EL Sbjct: 179 -SREVLNQLSFDQQVFDLSPYAKTSERIRFKPSDLWLTDLFDPTPALLETAGTRGELA-- 235 Query: 268 YRSEFHKRLT 277 +E H RL Sbjct: 236 --AEGHSRLA 243 >gi|260845740|ref|YP_003223518.1| hypothetical protein ECO103_3664 [Escherichia coli O103:H2 str. 12009] gi|257760887|dbj|BAI32384.1| conserved predicted membrane protein [Escherichia coli O103:H2 str. 12009] Length = 356 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 76/286 (26%), Positives = 118/286 (41%), Gaps = 27/286 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L ++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALYVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + NN L I S Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +T +I+ A+ S+D V SP + + +Y L + + + + Sbjct: 181 ANRT-RIFRAR--SVD------------VVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPE---LLETYRSEF---HKRLTQW 279 + NL LNP +PN + + + E RS F H L QW Sbjct: 226 YR----NLQLHLNPLDQSPNVKRKAKSVTELARSVFPADHAEL-QW 266 >gi|293412358|ref|ZP_06655081.1| conserved hypothetical protein [Escherichia coli B354] gi|291469129|gb|EFF11620.1| conserved hypothetical protein [Escherichia coli B354] Length = 356 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 75/286 (26%), Positives = 119/286 (41%), Gaps = 27/286 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + NN L I S Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +T +I+ A+ S+D V SP + + +Y L + + + + Sbjct: 181 ANRT-RIFRAR--SVD------------VVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPE---LLETYRSEF---HKRLTQW 279 + +L LNP +PN + + + E RS F H L QW Sbjct: 226 YR----HLQLHLNPLDQSPNVKRKAKSVTELARSVFPADHAEL-QW 266 >gi|157965014|ref|YP_001499838.1| putative permease [Rickettsia massiliae MTU5] gi|157844790|gb|ABV85291.1| Putative permease [Rickettsia massiliae MTU5] Length = 370 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 43/211 (20%), Positives = 102/211 (48%), Gaps = 4/211 (1%) Query: 26 IAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTE 85 I W+ QIL+ + L + ++ + ++PT+L ++ P + + ++ + Sbjct: 36 IVWITQILKLLYLFDKGIKVMD-FFSLIVLVLPTLLFILLPVITVITVIYIYNNLKVERQ 94 Query: 86 LLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYL 145 L+I+ +G + L P L++A+++ + + + I P +K + S + Sbjct: 95 LIILQASGVDNVQLALPALYVALIVMLLAYYISSTILPLSHINLKSRLNFIKNNYISSMI 154 Query: 146 EENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDL-DRQAII-L 203 EE F ++ D+ + I K + N + G+ I D+R+ + +A SG++++ D I L Sbjct: 155 EEKTFNKVTKDITVFIDKKSAGNIMNGVIIFDNRNADNPSVVFAGSGTLNIYDNSPIFEL 214 Query: 204 NDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 N G ++ ++ +++ + F S ++ ++ N Sbjct: 215 NKGR-RQEYDVNGNLTQLTFDSLMIKLQNDN 244 >gi|213963082|ref|ZP_03391340.1| permease YjgP/YjgQ family protein [Capnocytophaga sputigena Capno] gi|213954166|gb|EEB65490.1| permease YjgP/YjgQ family protein [Capnocytophaga sputigena Capno] Length = 508 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 65/301 (21%), Positives = 134/301 (44%), Gaps = 33/301 (10%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI+ ++FL + ++ I I I+ ++ L I+ K Y IP + Sbjct: 1 MKIIDRYIITQFLKNFLGALSILILIFVFHTIFTYIDELAGRGLELWIIFKFLIYFIPQL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIF-LFISEN 119 +P++ P + + S + E + +G S + +++P++ L LLSI F++ N Sbjct: 61 IPIIMPLAVVIASIMTFGSFAESYEFAAMKASGISLMRVMRPLIILMALLSIGTFFLANN 120 Query: 120 IIEPKCRS--TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT--LQGIFI 175 +I R T++ AK + A+ + E +F + +D+ IK+ K + +N L+ + I Sbjct: 121 VIPVAYREVYTLRSNIAKVKPAMAIA---EGVFSNIGEDISIKVGKKSGDNDQFLESVLI 177 Query: 176 -VDSRDTQTHKIYYAQSGSIDLDRQ-----AIILNDG-----------EVHRKSPISKDI 218 + D + A+ G + + +IL DG E +K P +K Sbjct: 178 HKKTPDRVNRTVINAKRGELKSAKSNPNFLQLILEDGTYYEDIKTNTYETQQKMPFAK-- 235 Query: 219 SIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQ 278 + FK Y + + ++ + + ++ + N N +Y +++ RS+F + +T Sbjct: 236 --VHFKKYVINLDLSHLNNVDFNEKSDATTYRMM-NVNQLDYA---IDSLRSDFKQNITD 289 Query: 279 W 279 + Sbjct: 290 Y 290 >gi|94495766|ref|ZP_01302346.1| permease YjgP/YjgQ [Sphingomonas sp. SKA58] gi|94425154|gb|EAT10175.1| permease YjgP/YjgQ [Sphingomonas sp. SKA58] Length = 402 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 57/284 (20%), Positives = 120/284 (42%), Gaps = 12/284 (4%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y+ R I L + + + + ++L + V++ ++++ ++ ++P L + P Sbjct: 8 YLARLIAVPMLGTLVIAAMLLVLDKMLSLFDFVAAEGGPVSVVWRMLANMLPEYLSLGIP 67 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + + ++EL ++ G S L++ AI L++ F ++P R Sbjct: 68 IGLMLGILLAFRKLAMSSELDVMRAVGLSYGRLLRVPYMYAIALALINFGIVGFVQPLSR 127 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISK-YNPNNTLQGIFI-VDSRDTQTH 184 + L + + + ++ F L + ++I + + LQGIF+ SRD Q+ Sbjct: 128 HAYEALRFELRSGALGASIKVGEFTNLGKRMTLRIERSRDQGRNLQGIFVRATSRDGQSV 187 Query: 185 KIYYAQSGSIDLDRQAII---LNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + AQ + D +I L DG + +P K I+ F S+ L + + + Sbjct: 188 AVTAAQGTFLATDDPDVIIFRLRDGVLVNDAPKYKTPRILSFSSHDLPIDLPQIESFRGR 247 Query: 242 ANDQNLSF----LLNPNPNNPNYRPELLETYRSEFHKRLTQWLF 281 ND+ + ++ N P P+L R+ FH R+ + +F Sbjct: 248 DNDREKTIPELVVIGKNQATP---PKLRNEVRANFHFRMVEVVF 288 >gi|126739399|ref|ZP_01755092.1| hypothetical protein RSK20926_20820 [Roseobacter sp. SK209-2-6] gi|126719499|gb|EBA16208.1| hypothetical protein RSK20926_20820 [Roseobacter sp. SK209-2-6] Length = 376 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 58/301 (19%), Positives = 121/301 (40%), Gaps = 14/301 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M ++ Y+L F L +V + WV + + + + +S + ++ + +P + Sbjct: 1 MSRYDRYVLSQYLLFFGFFALILVAVFWVNRAVVLFDRLIGDGQSALVFVEFTALTLPNL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + MV P + V + +EL ++ TGTS + +P L ++ ++ + ++ Sbjct: 61 IRMVLPVAVFASSVWVTNRLQSESELTVLRATGTSPWQMARPALVFGLVAALMMSALTHV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P S ++ + +T L E F + I K + TL+ +F+ D RD Sbjct: 121 LLPASISQLEIREREVSRNVTARLLTEGNFLHPAKGITFYIRKIESDGTLKDVFLSDRRD 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + Y + D ++ +I+ +G R + ++ +S F + S + S + Sbjct: 181 PNSSVTYTGSEAFLVRDGEKTHLIMVNGMAQRFTKDTRRLSTTNFSDF-----SYDISAL 235 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLET-------YRSEFHKRLTQWLFPVIFGLISIV 291 K+ D++ + P+ R ++ T E H R + L V LI Sbjct: 236 ARKSADRSRNIRAIPSLEILTAREQITNTDGYSAGALAEELHLRFARALVCVTVALIGFS 295 Query: 292 A 292 A Sbjct: 296 A 296 >gi|302342716|ref|YP_003807245.1| permease YjgP/YjgQ family protein [Desulfarculus baarsii DSM 2075] gi|301639329|gb|ADK84651.1| permease YjgP/YjgQ family protein [Desulfarculus baarsii DSM 2075] Length = 397 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 55/238 (23%), Positives = 99/238 (41%), Gaps = 11/238 (4%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y+LR + F +S F+ + +I++ +LV S L+++ ++ Y +P P Sbjct: 10 YLLREMIGPFFISLGVFTFMLLIAKIMELTDLVVSRGVGLDVVGRLLLYTLPYFFVFTIP 69 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAI----LLSIFLFISENIIE 122 + M+ + E++ + G S + PV LAI + S F Sbjct: 70 MATLLGVLLAFLRMSGDMEVVALKAAGVSPYAFLPPVAVLAICAWLVTSALAFWGLPWGN 129 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + + + Q+ AKAQ L L+E +F + I IS+ + +FIVD R+ Sbjct: 130 HRFENLVFQV-AKAQTDLA---LKERVFMDTFPGMVIYISRLPGQGQMTDLFIVDEREKG 185 Query: 183 THKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 H A+ G I + DR + L DG +H + F +Y + +++ S Sbjct: 186 RHHTIVAKRGKIFPANNDRLILRLYDGTIHSVGQNLRSAQTAAFVTYDIAVDASTLSA 243 >gi|262341091|ref|YP_003283946.1| putative YjgP/YjgQ family permease [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272428|gb|ACY40336.1| putative YjgP/YjgQ family permease [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 381 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 89/178 (50%), Gaps = 7/178 (3%) Query: 1 MKSFELYILRCIGRSFLM--SCLFIVFIAWVIQIL-QRINLVSSSTESLNILLKISGYLI 57 +K +LY++R F + S +F VF +IQ +I+ ++ ++ I++K Y Sbjct: 4 IKKLDLYMIRLFITPFFIIFSTIFAVF---MIQFFWSQIDELTGKNINILIIIKFVFYFG 60 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 +++P+VTP + + ++ N EL+ I ++G S ++KP+L + +LSI L+ Sbjct: 61 ISIIPLVTPISLLLTSIITFGHLSENQELIAIKSSGISLFRVMKPILGITCILSIGLYFF 120 Query: 118 ENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI 175 ++ PK K+L K L+E +F L D +IKI + N L IFI Sbjct: 121 SDLAIPKAIKQAKKLGYKISSTHPSFKLKEGIFVNLLPDFFIKIDR-KKNQQLHNIFI 177 >gi|301048205|ref|ZP_07195241.1| conserved hypothetical protein [Escherichia coli MS 185-1] gi|300299963|gb|EFJ56348.1| conserved hypothetical protein [Escherichia coli MS 185-1] Length = 356 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 75/286 (26%), Positives = 117/286 (40%), Gaps = 27/286 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++F + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFFFARYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYASVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + NN L I S Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +T +I+ A+ S+D V SP + + +Y L + + + + Sbjct: 181 ANRT-RIFRAR--SVD------------VVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPE---LLETYRSEF---HKRLTQW 279 + NL LNP +PN + + + E RS F H L QW Sbjct: 226 YR----NLQLHLNPLDQSPNVKRKAKSVTELARSVFPADHAEL-QW 266 >gi|254465542|ref|ZP_05078953.1| permease YjgP/YjgQ [Rhodobacterales bacterium Y4I] gi|206686450|gb|EDZ46932.1| permease YjgP/YjgQ [Rhodobacterales bacterium Y4I] Length = 364 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 41/210 (19%), Positives = 91/210 (43%), Gaps = 2/210 (0%) Query: 20 CLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTS 79 L +V + WV + + + + + +S + L+ + +P ++ MV P V Sbjct: 12 ALILVAVFWVNRAVVLFDTLIGNGQSALVFLEFTALTLPNLIRMVLPIAAFGAAVWVTNR 71 Query: 80 MNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLA 139 +N +EL ++ TGTS + +P L I+ ++ + + + P + +++ ++ Sbjct: 72 LNSESELTVLRATGTSPWQMARPALAFGIITALMMSALTHYLLPASINQLEERESEVSRN 131 Query: 140 LTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQ 199 +T L E F + + I + +P+ TL +F+ D RD Y + D Sbjct: 132 ITAKLLSEGDFLHPAEGVTFYIRQIDPDGTLNDVFLSDRRDPAVTVTYTGTRAFLVRDEG 191 Query: 200 A--IILNDGEVHRKSPISKDISIMKFKSYT 227 + +I+ +G R ++ +S F ++ Sbjct: 192 SAHLIMVEGMAQRLDNETQRMSTTFFSDFS 221 >gi|331659262|ref|ZP_08360204.1| putative permease [Escherichia coli TA206] gi|315297643|gb|EFU56920.1| conserved hypothetical protein [Escherichia coli MS 16-3] gi|331053844|gb|EGI25873.1| putative permease [Escherichia coli TA206] Length = 356 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 59/213 (27%), Positives = 96/213 (45%), Gaps = 5/213 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYASVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + NN L I S Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 180 DTQTHKIYYAQS-GSIDL--DRQAIILNDGEVH 209 +T +I+ A+S +DL ++ ++L++G + Sbjct: 181 ANRT-RIFRARSVDVVDLSPEKPTVMLHNGTAY 212 >gi|258542689|ref|YP_003188122.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-01] gi|256633767|dbj|BAH99742.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-01] gi|256636826|dbj|BAI02795.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-03] gi|256639879|dbj|BAI05841.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-07] gi|256642935|dbj|BAI08890.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-22] gi|256645990|dbj|BAI11938.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-26] gi|256649043|dbj|BAI14984.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-32] gi|256652030|dbj|BAI17964.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655087|dbj|BAI21014.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-12] Length = 399 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 77/346 (22%), Positives = 152/346 (43%), Gaps = 44/346 (12%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQ-ILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + Y++ + FL++ L +V IA +++ +L NL+++ + I + + L+P L Sbjct: 22 TLDRYLIAQVMPPFLVA-LSVVMIALILERLLVLFNLLAAGNNHIGIFIGLLAALLPHYL 80 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + V+ M++N E+ I+++G S + + +P + L ++L + F+ I Sbjct: 81 GLAIPAALCVAVFTVIRRMSQNEEIDAINSSGLSLLRITRPYIQLGVILGVLSFLLYGFI 140 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSRD 180 +P R + A L+ +F L I K + + + L+ +FI D + Sbjct: 141 QPHARYDFRSTFYIASHTGWAPRLQPRMFASPSSQLTIVADKVSQSGSDLENVFIRDLSE 200 Query: 181 TQTHKIYYAQSG-----------SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ 229 Q I A++G IDL I+ + G+ P S++ F T Sbjct: 201 QQERDI-TARNGHIRIGSDGETVEIDLTNGVIVTDKGD---GVP-----SLVTFDHSTRY 251 Query: 230 -TESANSSTIVLKANDQN-------LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLF 281 T +++ S + D+ + L+ +P+ RP + RSE H R+ + L Sbjct: 252 LTHASHISPFRTRGEDERELTSPELVGRLIRHDPS--ISRPHM----RSEVHFRMARSLT 305 Query: 282 PVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH 327 L+ A AL+R+R++ + L ++F + GF +II Sbjct: 306 VPFMPLL----AASLALMRKRQRNN---AGLPLAFIIMVGFDHIIQ 344 >gi|218961270|ref|YP_001741045.1| putative Permease YjgP/YjgQ [Candidatus Cloacamonas acidaminovorans] gi|167729927|emb|CAO80839.1| putative Permease YjgP/YjgQ [Candidatus Cloacamonas acidaminovorans] Length = 442 Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 46/216 (21%), Positives = 98/216 (45%), Gaps = 6/216 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y+L+ F ++ + + F+ +I+ +NL+ + ++ G +P + Sbjct: 1 MKILKRYLLKEHIAPFFIALMVVTFVLLSDRIIDLMNLIIEKKLPWQTVFEVFGLSLPYM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + T M+ + E+ I ++G + +LI P++ A+LL+ + + Sbjct: 61 LALSIPMAVLVATILAFGRMSVDREITAIKSSGINVYSLIGPLVIAALLLTGLMVYFNHW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P +K L K + ++E F D Y ++ ++ L + I D Sbjct: 121 FLPDTNHKLKNLMLKIAYYKPMTIIKEKEFTNFMD--YTIYARETTDSLLTDVLIYDRSQ 178 Query: 181 TQTHKIYYAQSGSI----DLDRQAIILNDGEVHRKS 212 + + +A+SG++ + + IILNDGE+H ++ Sbjct: 179 SHFPRTIFAKSGNVIQKDNGNSLQIILNDGEMHERN 214 >gi|89070356|ref|ZP_01157663.1| Predicted permease [Oceanicola granulosus HTCC2516] gi|89044003|gb|EAR50178.1| Predicted permease [Oceanicola granulosus HTCC2516] Length = 370 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 38/175 (21%), Positives = 82/175 (46%), Gaps = 6/175 (3%) Query: 20 CLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP---FCFAMETTNV 76 L ++ + WV + + + + S +S + L+ S +P ++ +V P F A+ TN Sbjct: 8 SLVLILLYWVNRAVVLFDQLISDGQSALVFLEFSALSLPAIIRIVLPLAAFIAALYVTNK 67 Query: 77 LTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKA 136 LT+ +ELL++ +TG S + L +P +++++ +++ P + + + Sbjct: 68 LTT---ESELLVVQSTGFSPVRLARPAFVFGLIVTLLTGALTHVLVPVAAAQLGARQDEI 124 Query: 137 QLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQS 191 +T +L F D + + + N LQ +F+ D+R++ IY A + Sbjct: 125 ASNITARFLTPGQFLNPVDGITVYVRDINDAGALQDLFLADTRESGRQVIYTAAT 179 >gi|309794091|ref|ZP_07688516.1| conserved hypothetical protein [Escherichia coli MS 145-7] gi|308122498|gb|EFO59760.1| conserved hypothetical protein [Escherichia coli MS 145-7] Length = 356 Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 75/286 (26%), Positives = 118/286 (41%), Gaps = 27/286 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLLVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + NN L I S Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +T +I+ A+ S+D V SP + + +Y L + + + + Sbjct: 181 ANRT-RIFRAR--SVD------------VVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPE---LLETYRSEF---HKRLTQW 279 + NL LNP +PN + + + E RS F H L QW Sbjct: 226 YR----NLQLHLNPLDQSPNVKRKAKSVTELARSAFPADHAEL-QW 266 >gi|306816677|ref|ZP_07450809.1| hypothetical protein ECNC101_08664 [Escherichia coli NC101] gi|305850242|gb|EFM50701.1| hypothetical protein ECNC101_08664 [Escherichia coli NC101] Length = 356 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 75/286 (26%), Positives = 117/286 (40%), Gaps = 27/286 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYASVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + NN L I S Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +T +I+ A+ S+D V SP + + +Y L + + + + Sbjct: 181 ANRT-RIFRAR--SVD------------VVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPE---LLETYRSEF---HKRLTQW 279 + NL LNP + N + + + E RS F H L QW Sbjct: 226 YR----NLQLHLNPLDQSANVKRKAKSVTELARSVFPADHAEL-QW 266 >gi|281180021|dbj|BAI56351.1| conserved hypothetical protein [Escherichia coli SE15] Length = 356 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 75/286 (26%), Positives = 117/286 (40%), Gaps = 27/286 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYASVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + NN L I S Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +T +I+ A+ S+D V SP + + +Y L + + + + Sbjct: 181 ANRT-RIFRAR--SVD------------VVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPE---LLETYRSEF---HKRLTQW 279 + NL LNP + N + + + E RS F H L QW Sbjct: 226 YR----NLQLHLNPLDQSANVKRKAKSVTELARSVFPADHAEL-QW 266 >gi|191172497|ref|ZP_03034037.1| putative permease, YjgP/YjgQ family [Escherichia coli F11] gi|300993119|ref|ZP_07180205.1| hypothetical protein HMPREF9553_04259 [Escherichia coli MS 200-1] gi|190907165|gb|EDV66764.1| putative permease, YjgP/YjgQ family [Escherichia coli F11] gi|300305134|gb|EFJ59654.1| hypothetical protein HMPREF9553_04259 [Escherichia coli MS 200-1] gi|324011925|gb|EGB81144.1| hypothetical protein HMPREF9533_04083 [Escherichia coli MS 60-1] Length = 356 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 75/286 (26%), Positives = 117/286 (40%), Gaps = 27/286 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYASVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + NN L I S Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +T +I+ A+ S+D V SP + + +Y L + + + + Sbjct: 181 ANRT-RIFRAR--SVD------------VVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPE---LLETYRSEF---HKRLTQW 279 + NL LNP + N + + + E RS F H L QW Sbjct: 226 YR----NLQLHLNPLDQSANVKRKAKSVTELARSVFPADHAEL-QW 266 >gi|83594275|ref|YP_428027.1| permease YjgP/YjgQ [Rhodospirillum rubrum ATCC 11170] gi|83577189|gb|ABC23740.1| permease YjgP/YjgQ [Rhodospirillum rubrum ATCC 11170] Length = 396 Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 65/318 (20%), Positives = 136/318 (42%), Gaps = 38/318 (11%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 YILR + + + ++ + W+I L+ ++ + S+ L+++ L+P L + P Sbjct: 9 YILRNLLVGLAVGSVALIVLIWLINSLKFLDWFVNKGLSVATFLRLTLLLMPGFLTVFIP 68 Query: 67 ---FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFL-AILLSIFLFISENIIE 122 F + T N L + + EL+++ G L +P L L A+L + +++ +++ Sbjct: 69 IALFAVVLFTYNRLAA---DRELIVMRAAGMGPWQLARPALALCAVLTGVGYWLTLSVV- 124 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + + + + ++ ++E F ++ D L + + + L + I D+ Sbjct: 125 PAMEGAFEAIKYEVRGEVSSLVIKEGQFNQMKDGLIVYAGERAKDGRLIDLMIHDTTGKT 184 Query: 183 THKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST--- 237 + A+SG++ + + I+L +G ++ + ++ + F SY + +ST Sbjct: 185 SDLTVMAESGALVREGEGARILLINGNRQERNRQTGKVNFLYFDSYAVDLGGKAASTEMR 244 Query: 238 ------------IVLKANDQNLSFLLNPNPNNP-NYRPELLETYRSEFHKRLTQWLFPVI 284 I LKA D+ +P+ P Y + R E H RL + L + Sbjct: 245 FREERERPLSELISLKAGDR-------IDPDYPFTYEERHIRRMRMEAHLRLLRPLAHIG 297 Query: 285 FGLISIVAA-----DKRA 297 F LI + A D+R Sbjct: 298 FLLIGLAAVLTGEFDRRG 315 >gi|256820290|ref|YP_003141569.1| permease YjgP/YjgQ family protein [Capnocytophaga ochracea DSM 7271] gi|256581873|gb|ACU93008.1| permease YjgP/YjgQ family protein [Capnocytophaga ochracea DSM 7271] Length = 495 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 64/301 (21%), Positives = 131/301 (43%), Gaps = 33/301 (10%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI+ +FL + +V I I I+ ++ L I+ K Y IP + Sbjct: 1 MKILDRYIITQFLTNFLGALSILVLIFVFHTIFTYIDELAGRGLELWIIFKFLIYFIPQL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIF-LFISEN 119 +P++ P + + + N E + +G S + +++P++ L LLS+ F++ N Sbjct: 61 IPIIMPLAVVIASIMTFGAFAENYEFAAMKASGISLMRVMRPLIILMALLSLGTFFLANN 120 Query: 120 IIEPKCRS--TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT--LQGIFI 175 +I R T++ AK + A+ + E +F + +D+ IK+ K +N L+ + I Sbjct: 121 VIPVAYREVYTLRSNIAKVKPAMAIA---EGVFSNIGEDISIKVGKKRGDNDEFLENVLI 177 Query: 176 -VDSRDTQTHKIYYAQSGSIDLDRQ-----AIILNDG-----------EVHRKSPISKDI 218 + D + A+ G + + +IL DG E +K P +K Sbjct: 178 HKKTPDKVNRTVINAKRGELKSSKTNSNFLQLILEDGTYYEDIKTNSYEAQQKEPFAK-- 235 Query: 219 SIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQ 278 + FK Y + + ++ + + ++ + N NY +++ R++F + +T Sbjct: 236 --VYFKKYIINLDLSHLNNVDFNEKTDATTYRM-MNVGQLNYA---IDSLRTDFKQNITD 289 Query: 279 W 279 + Sbjct: 290 Y 290 >gi|320353217|ref|YP_004194556.1| permease YjgP/YjgQ family protein [Desulfobulbus propionicus DSM 2032] gi|320121719|gb|ADW17265.1| permease YjgP/YjgQ family protein [Desulfobulbus propionicus DSM 2032] Length = 508 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 62/292 (21%), Positives = 118/292 (40%), Gaps = 26/292 (8%) Query: 16 FLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTN 75 F S L + + ++++++ + +V + L +++ Y+ P +L + P Sbjct: 47 FFASFLILYCVFFLVRLIPLLEVVLALRIGLADFIRLFSYIFPRMLLYIIPMASMAGVIV 106 Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFL-FISENIIEPKCRSTIKQLSA 134 T + + E+L + G S ++ PV+ +A ++ F S +I P KQL Sbjct: 107 GFTRLTNDREILALKACGVSLKQMLPPVILIAAAIATLTGFFSIRLI-PAGALGFKQLMF 165 Query: 135 KAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSI 194 + L+ F D+ + + + + G+++ D R I A+SG + Sbjct: 166 ELAKEKIDKGLKAREFTEALGDIVVYVDEIDDQQRWHGVYVSDMRGRTQPLITVAKSGHM 225 Query: 195 DLDRQ----AIILNDGEVHRKSPISKDISIMKFKSYTLQ----------TESANSSTIVL 240 + + + I+LNDG +H D +++F Y LQ E S T Sbjct: 226 EAEMERMTVTIVLNDGTLHNNE--GTDNQVVRFGRYQLQISLRPPTQIGKEDVTSQTRGA 283 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + Q L PN+ +R + SE+H RL PV ++SI+ Sbjct: 284 MSQQQLLRAAAKQKPNSKLHR-----IFLSEYHHRLA---LPVGCFILSILG 327 >gi|255264665|ref|ZP_05344007.1| permease YjgP/YjgQ family protein [Thalassiobium sp. R2A62] gi|255107000|gb|EET49674.1| permease YjgP/YjgQ family protein [Thalassiobium sp. R2A62] Length = 380 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 33/171 (19%), Positives = 79/171 (46%) Query: 20 CLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTS 79 L ++ + WV + + + + + +S + L+ + +P V+ +V P + V Sbjct: 26 SLVLIMVYWVNRAVILFDQLIADGQSAGVFLEFTALSLPNVIRLVLPLSAFAASVYVTNR 85 Query: 80 MNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLA 139 ++ ++EL ++ TG S + L +PV+ +L++ + + +++ P S + A+ Sbjct: 86 LSTDSELTVMQATGHSAVRLARPVIVFGLLVTALMMVLTHVLVPTSLSRLNDREAEIAEN 145 Query: 140 LTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQ 190 +T L E F + + + + + L IF+ D+R+ + Y A+ Sbjct: 146 VTARLLTEGTFLNPASGITFYVREISASGELLDIFLTDTRNPKRQITYTAE 196 >gi|298506037|gb|ADI84760.1| membrane protein, YjgP-related [Geobacter sulfurreducens KN400] Length = 388 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 58/251 (23%), Positives = 109/251 (43%), Gaps = 26/251 (10%) Query: 55 YLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVL-FLAILLSIF 113 Y++P+ + P F + + ++ ++E+ + +G S T+ PV+ F I + Sbjct: 56 YMLPSFFLVAIPMAFLLAVLLAMGRLSADSEVTAMKASGMSIGTIAVPVIAFGVITYAAT 115 Query: 114 LFISENIIEPKCRSTIKQ-----LSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-N 167 F+S + P + K+ + +A +++T E +F L I + ++P + Sbjct: 116 TFVSVYAL-PWGNTAFKKFLHGVIETRAAMSIT-----EKVFNDEFPGLVIYVDGFDPKS 169 Query: 168 NTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAII----LNDGEVHRKSPISKDISIMKF 223 + GI I D R+ +A SG + + + I LN+G +HR + +++F Sbjct: 170 GRISGILIHDERNPDEPSTIFAASGQLATNPEERIVRLRLNNGGIHRGIG-TGGYRLVEF 228 Query: 224 KSY----TLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQW 279 SY LQ E + L D L LL +P +P+L+ E HKR Sbjct: 229 TSYDLSIALQREQQKAR---LNEEDMTLGELLA-RMKSPGEQPKLVREMHFELHKRFALP 284 Query: 280 LFPVIFGLISI 290 V+F +I++ Sbjct: 285 FACVVFAVIAV 295 >gi|39997020|ref|NP_952971.1| hypothetical protein GSU1922 [Geobacter sulfurreducens PCA] gi|39983908|gb|AAR35298.1| membrane protein, putative [Geobacter sulfurreducens PCA] Length = 399 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 58/251 (23%), Positives = 109/251 (43%), Gaps = 26/251 (10%) Query: 55 YLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVL-FLAILLSIF 113 Y++P+ + P F + + ++ ++E+ + +G S T+ PV+ F I + Sbjct: 67 YMLPSFFLVAIPMAFLLAVLLAMGRLSADSEVTAMKASGMSIGTIAVPVIAFGVITYAAT 126 Query: 114 LFISENIIEPKCRSTIKQ-----LSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-N 167 F+S + P + K+ + +A +++T E +F L I + ++P + Sbjct: 127 TFVSVYAL-PWGNTAFKKFLHGVIETRAAMSIT-----EKVFNDEFPGLVIYVDGFDPKS 180 Query: 168 NTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAII----LNDGEVHRKSPISKDISIMKF 223 + GI I D R+ +A SG + + + I LN+G +HR + +++F Sbjct: 181 GRISGILIHDERNPDEPSTIFAASGQLATNPEERIVRLRLNNGGIHRGIG-TGGYRLVEF 239 Query: 224 KSY----TLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQW 279 SY LQ E + L D L LL +P +P+L+ E HKR Sbjct: 240 TSYDLSIALQREQQKAR---LNEEDMTLGELLA-RMKSPGEQPKLVREMHFELHKRFALP 295 Query: 280 LFPVIFGLISI 290 V+F +I++ Sbjct: 296 FACVVFAVIAV 306 >gi|110598486|ref|ZP_01386757.1| permease YjgP/YjgQ [Chlorobium ferrooxidans DSM 13031] gi|110339936|gb|EAT58440.1| permease YjgP/YjgQ [Chlorobium ferrooxidans DSM 13031] Length = 435 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 55/207 (26%), Positives = 91/207 (43%), Gaps = 15/207 (7%) Query: 53 SGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSI 112 S +++ PM M S+ N+E+ ++ +G S L+ PVL +A+LLS+ Sbjct: 57 SAWMVGLAAPMAVLIAVVM----AFGSLTTNSEMTVLRASGISLYRLMFPVLCVALLLSL 112 Query: 113 FLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQ 171 + NI+ P K L A L+EN F L D I + + + + ++ Sbjct: 113 CVERFNNIVLPLANYHAKSLMVDIARAKPAFGLKENAFSTLVDGYSILVREADDQSKEIR 172 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDL--DRQAIILN--DGEVHR-KSPISKDISIMKFKSY 226 G+ I D + A+ G+I+ D Q +++ DGE+H+ K P + + FK Y Sbjct: 173 GVVIYDRSRPNFTTMETAERGTIEFSGDFQYLVMTLLDGEIHQVKQPAHQVYRNLSFKKY 232 Query: 227 TLQTES-----ANSSTIVLKANDQNLS 248 ES A +S L+ D LS Sbjct: 233 RFVFESSGFGFARTSANRLRTGDSELS 259 >gi|47155054|emb|CAE85253.1| putative permease [Escherichia coli] Length = 227 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 55/192 (28%), Positives = 85/192 (44%), Gaps = 2/192 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + NN L I S Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 180 DTQTHKIYYAQS 191 +T +I+ A+S Sbjct: 181 ANRT-RIFRARS 191 >gi|315223351|ref|ZP_07865210.1| YjgP/YjgQ family permease [Capnocytophaga ochracea F0287] gi|314946682|gb|EFS98671.1| YjgP/YjgQ family permease [Capnocytophaga ochracea F0287] Length = 495 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 64/301 (21%), Positives = 131/301 (43%), Gaps = 33/301 (10%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI+ +FL + +V I I I+ ++ L I+ K Y IP + Sbjct: 1 MKILDRYIITQFLTNFLGALSILVLIFVFHTIFTYIDELAGRGLELWIIFKFLIYFIPQL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIF-LFISEN 119 +P++ P + + + N E + +G S + +++P++ L LLS+ F++ N Sbjct: 61 IPIIMPLAVVIASIMTFGAFAENYEFAAMKASGISLMRVMRPLIILMALLSLGTFFLANN 120 Query: 120 IIEPKCRS--TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT--LQGIFI 175 +I R T++ AK + A+ + E +F + +D+ IK+ K +N L+ + I Sbjct: 121 VIPVAYREVYTLRSNIAKVKPAMAIA---EGVFSNIGEDISIKVGKKRGDNDEFLENVLI 177 Query: 176 -VDSRDTQTHKIYYAQSGSIDLDRQ-----AIILNDG-----------EVHRKSPISKDI 218 + D + A+ G + + +IL DG E +K P +K Sbjct: 178 HKKTPDKVNRTVINAKRGELKSSKTNSNFLQLILEDGTYYEDIKTNSYEAQQKEPFAK-- 235 Query: 219 SIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQ 278 + FK Y + + ++ + + ++ + N NY +++ R++F + +T Sbjct: 236 --VYFKKYIINLDLSHLNNVNFNEKTDATTYRM-MNVGQLNYA---IDSLRTDFKQNITD 289 Query: 279 W 279 + Sbjct: 290 Y 290 >gi|126736391|ref|ZP_01752133.1| hypothetical protein RCCS2_01329 [Roseobacter sp. CCS2] gi|126714212|gb|EBA11081.1| hypothetical protein RCCS2_01329 [Roseobacter sp. CCS2] Length = 369 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 54/251 (21%), Positives = 100/251 (39%), Gaps = 20/251 (7%) Query: 20 CLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTS 79 L ++ I W+ + + + + + +S + L+ + +P+V+ + P V Sbjct: 13 SLVLILIYWINRAVVLFDQLIADGQSAGVFLEFTALSLPSVMRLALPLAAFAAAVYVTNR 72 Query: 80 MNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLA 139 M+ +EL ++ TG S L +PVL+ I++++ + + + P + + A+ Sbjct: 73 MSTESELTVVQATGYSPFRLARPVLYFGIIVALMMSALMHFLVPMSAARLADRQAEIAQN 132 Query: 140 LTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSI--DLD 197 +T L E F + + I P LQ IF+ D+R Y A + D D Sbjct: 133 ITARLLTEGQFLEPINGVTFYIRDITPAGELQDIFLSDTRSDAEQVTYTATKAFLVRDND 192 Query: 198 RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNN 257 +++ DG V TL+TE+ T N+S L+ P N Sbjct: 193 TIQLVMLDGMVQ-----------------TLRTENQRLFTTTFDDFAYNISDLIR-QPRN 234 Query: 258 PNYRPELLETY 268 R L T+ Sbjct: 235 RGRRDAYLFTW 245 >gi|313157781|gb|EFR57192.1| permease, YjgP/YjgQ family [Alistipes sp. HGB5] Length = 500 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 51/242 (21%), Positives = 115/242 (47%), Gaps = 14/242 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ +L+ +++ ++F+ + + + I+ + S I++++ Y + + Sbjct: 1 MKTIHKLVLKAYLGPMVLTFFIVMFVLMMNIVWRYIDELVGKGLSAGIIIELMTYFMANM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIF-LFISEN 119 +P+ P + + ++ N ELL + + G S I + KP++ L L+S+ FI N Sbjct: 61 IPLGLPLAMLLAAIMTMGNLGENYELLAMKSAGMSLIRITKPLIILVSLISVGSFFIGNN 120 Query: 120 II---EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFI 175 ++ K S + + + Q +L F ++ LFF D++ I++S+ P + L + I Sbjct: 121 LVPYANKKVFSILYDIRQQKQ-SLEF---QDGLFFNGIDNMSIRVSRQEPETHLLHDVLI 176 Query: 176 VDSRDTQTH-KIYYAQSGSIDL--DRQAIILN--DGEVHRKSPISKDISIMKFKSYTLQT 230 D+R A SG I L D++ +++ +GE + ++ S+ + K + + + Sbjct: 177 YDNRAANGDMNTIVADSGYIRLSDDKKYLLVTLFNGETYEQTRSSQWFTQSKLRHHIFEK 236 Query: 231 ES 232 + Sbjct: 237 QD 238 >gi|149915564|ref|ZP_01904090.1| hypothetical protein RAZWK3B_06402 [Roseobacter sp. AzwK-3b] gi|149810456|gb|EDM70299.1| hypothetical protein RAZWK3B_06402 [Roseobacter sp. AzwK-3b] Length = 376 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 71/310 (22%), Positives = 130/310 (41%), Gaps = 33/310 (10%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y++R + F L ++ I W+ + L+ + +S +LL++ +P V Sbjct: 1 MTKFDQYVIRKLITLFAFFALILIAIFWLDKALRMFERLLGKGQSNWLLLELILLTLPPV 60 Query: 61 LPMVTP---FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 + + P F A+ TN L+S E+ I+ +G S +I+P+ IL + + Sbjct: 61 VASILPIASFASAVSVTNRLSS---EAEITIMKASGCSTYRIIRPIFIFGILTTSLMAWL 117 Query: 118 ENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD 177 N I P+ + L ++ +T S+L E F + + I K + L+ IF+ D Sbjct: 118 TNSILPESGKRLSSLRSQVDQNITSSFLTEGEFLHPTPGVTLFIGKVTQDAELRRIFLSD 177 Query: 178 SRDTQ------THKIYYAQSGS------IDLDRQAIILNDGE--VHRKSPISKDISIMKF 223 RD + K Y S + +D Q + ND + V R + DIS + Sbjct: 178 RRDLRETIIITAEKAYTEHSPTTVQLLMVDGTTQILRENDNKLFVGRFEEYALDISELVE 237 Query: 224 KSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPV 283 +Y+ Q + T+ L + P+ + + L E E H R Q P+ Sbjct: 238 TTYSTQKTVTQAKTVEL---------IKQPSEVIASTKATLGEV-AFELHNRFAQ---PI 284 Query: 284 IFGLISIVAA 293 + + +++ A Sbjct: 285 LCAIAAVLGA 294 >gi|118580061|ref|YP_901311.1| permease YjgP/YjgQ family protein [Pelobacter propionicus DSM 2379] gi|118502771|gb|ABK99253.1| permease YjgP/YjgQ family protein [Pelobacter propionicus DSM 2379] Length = 382 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 52/294 (17%), Positives = 122/294 (41%), Gaps = 6/294 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 ++ L I+R I FL+ + + ++++ +V S +L + ++ L+P+ L Sbjct: 3 RTLYLSIIREITSLFLLGLGIFTLVLLMGRMIKLTEMVISRGVALADMGRMIICLMPSFL 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P F + ++ ++E+ ++ G S + ++ PVL A++ + + + Sbjct: 63 VYTIPMAFLLAVLLTFGRLSADSEITVMKACGISLVQIMPPVLLCALVAATLGLYAGVVG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSRD 180 P +S S + E +F+ + + Y+ +TL G+ I D R+ Sbjct: 123 VPWGNRAFAAMSFDMLSQNVSSTIREKVFWDDIPGIVLYTDHYDEERHTLSGVVINDERN 182 Query: 181 TQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 +A SG + +IL G +H + + ++ F Y + + + Sbjct: 183 ASRPLTIFASSGLVAGGANPRDVRLILRSGSIHAQGR-GGEYRLIHFAEYVMNIAAPGGT 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 V +A + L+ + +P+ +P+L + +E H R ++F ++++ Sbjct: 242 DTVTRAPREMTVTELHRSIASPSTQPKLRKKMATEMHSRFALPFASLVFAVLAV 295 >gi|218665831|ref|YP_002426599.1| YjgP/YjgQ family protein [Acidithiobacillus ferrooxidans ATCC 23270] gi|218518044|gb|ACK78630.1| YjgP/YjgQ family protein [Acidithiobacillus ferrooxidans ATCC 23270] Length = 373 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 56/235 (23%), Positives = 105/235 (44%), Gaps = 14/235 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + ++R + SFL++ L ++ I + Q+ Q + V+S L+I+L++ G +PT+ Sbjct: 1 MTRIRMQVVRNLTISFLLTSLVVLAILAIGQLTQLLRQVASGQLPLSIILRLLGLALPTL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L MV P F V +++ R+ E++ I +TGT L+ PV +A + I Sbjct: 61 LVMVLPLAFFFAVYLVFSNLYRSNEMVAIRSTGTGLSGLLPPVAVVAACVFCLELILSLS 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT--LQGIFIVDS 178 P + ++ S + A + L+ F L I + + N+ Q IF+ + Sbjct: 121 WAPGAQRELQSESVRLANAAAEAMLQPGSFTNLPGGRVIYVGQAVGKNSHRFQEIFLSVA 180 Query: 179 RDTQT-------HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSY 226 + Q ++ AQ G++ L +L DG+ + P ++ F Y Sbjct: 181 QGGQLDMATAAYGEVKPAQDGALTL-----VLVDGQRYLGQPGKAGFKVLSFARY 230 >gi|255020899|ref|ZP_05292955.1| Predicted permease [Acidithiobacillus caldus ATCC 51756] gi|254969690|gb|EET27196.1| Predicted permease [Acidithiobacillus caldus ATCC 51756] Length = 372 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 54/242 (22%), Positives = 104/242 (42%), Gaps = 6/242 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M ILR + R F+ CL ++ I + Q+ Q ++ V+S L + L++ G PT+ Sbjct: 1 MSRIHARILRDLLRVFVFGCLLVLGILAIGQLSQLLSQVASGQLPLGVTLQLLGLATPTL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V P F V +++ R+ E++ I + G S + L++ + +++++ + Sbjct: 61 LVTVLPLAFFFALYLVFSNLYRSNEMMAIRSAGLSLLDLLRALALPILVIALLEALLSLS 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD--LYIKISKYNPNNTLQGIFIVDS 178 P + ++ S + A + ++ F R+ LY+ S + + IF VD Sbjct: 121 WSPAAQRQLQAESLRLANAAAEALIQPGSFARIAGGHILYVGQSAPGSEHRYREIF-VDL 179 Query: 179 RDTQTHKIYYAQSGSIDLDRQ---AIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 I A G I D+ A++L G + P + I+ F Y + + Sbjct: 180 GGKGEPDIATAAFGEIRKDQDGGIALVLIQGHRYLGQPGTAGFKILSFVHYRIALAAPQG 239 Query: 236 ST 237 S+ Sbjct: 240 SS 241 >gi|288962055|ref|YP_003452365.1| predicted permease [Azospirillum sp. B510] gi|288914335|dbj|BAI75821.1| predicted permease [Azospirillum sp. B510] Length = 385 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 67/350 (19%), Positives = 141/350 (40%), Gaps = 19/350 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+ R + + L S + W+ Q L+ I +V S+ + + L + +PT Sbjct: 1 MNRLQRYLFRNLLIATLYSTAGLTLTIWLSQSLRLIEIVVSAGAPMGMFLWLLLLTVPTF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L +V P M ++EL+++ G +L P L LA+ + + + Sbjct: 61 LGVVLPLALVGAILFTYNKMTTDSELVVMRAAGVGPFSLSTPALVLAVAVMAIVLVLNVW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + ++ + + +L E +F + D + + + + L + I D R Sbjct: 121 ITPAAHRELVRMEYAVRSDYSQLFLREGVFNEVGDRFSVFLRDRDSDGNLHKVLIHDGRQ 180 Query: 181 -----TQTHKIYYAQSGSIDLDRQAIILNDG---EVHRKSPISKDISIMKFKSYT--LQT 230 T Q+G+ D ++ DG E+ RK + +S + F+ Y L+ Sbjct: 181 PDKPVTIMGDRALMQTGA---DGTRFVVYDGNRQELDRK---TNRLSQLFFERYAVDLKA 234 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 + ++ A +++ L++ N P + +E H R + L + F L+++ Sbjct: 235 VAPQAADRWPDARERSTEDLMSGNV--PAQDDRMRRGLIAELHHRFSSPLLALTFALVAL 292 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY 340 A R R + + I++ + G+ G + + ++P++Y Sbjct: 293 SALLSGEFNR-RGQSSRVTIAVLLVMGLQAGALGLTSLAGKATVFVPLMY 341 >gi|315500012|ref|YP_004088815.1| permease yjgp/yjgq family protein [Asticcacaulis excentricus CB 48] gi|315418024|gb|ADU14664.1| permease YjgP/YjgQ family protein [Asticcacaulis excentricus CB 48] Length = 384 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 65/310 (20%), Positives = 130/310 (41%), Gaps = 15/310 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M++ E YI R + L + + IA + Q L + +++ +SL+ LKI+ +P + Sbjct: 1 MRTIEGYISRQMRTPILGAIAALTAIAILSQSLTQFDVIVERGQSLSTFLKITFLALPQL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + T L M+ + E++ G S + PV+ + +++ + Sbjct: 61 SGLIFPVAIFVGTLVALNRMHNDHEIVAGYANGMSLWRIASPVVRFGVYITLMGLLMTLF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I+P +++ K + + + + E F + I + + + + L+ IFI Sbjct: 121 IQPAASRAMREELFKIKTDVIAAAVREGDFSTTPSGMTIYVQRIDQSGLLRQIFIRTPGP 180 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANS 235 + Y A+ G + Q +IL DG + SP ++ + F Y+ + Sbjct: 181 HGLDRTYLAREGRVITPVKGGQVLILRDGSTQQLSP-EGVLNHLTFAEYSFDISQYVISE 239 Query: 236 STIVLKANDQNLSFLLNPNP----NNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 + K +D+ L PN N N+ + +E H R++ L+ + F L++IV Sbjct: 240 DYLHFKDSDRFPHELFFPNRAMEWENGNWTKLM-----AEGHARISGPLYNLGFCLLAIV 294 Query: 292 AADKRALVRQ 301 A RQ Sbjct: 295 GVLGGAFSRQ 304 >gi|126725340|ref|ZP_01741182.1| Predicted permease [Rhodobacterales bacterium HTCC2150] gi|126704544|gb|EBA03635.1| Predicted permease [Rhodobacterales bacterium HTCC2150] Length = 367 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 61/327 (18%), Positives = 138/327 (42%), Gaps = 17/327 (5%) Query: 37 NLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSR 96 +L+S +L + L+ + +P V+ +V P + + V + +E++++ + G S Sbjct: 31 DLISDGHTAL-VFLEFTALALPNVILLVLPVAGFVASIYVANRLISESEMVVMQSAGHSA 89 Query: 97 ITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD 156 L+ P L + + + + I +I+ P R+ + + + +T +L F +D Sbjct: 90 KRLMVPALIFGVGIFVMMSILSHILVPISRTALAEREGELSQDVTTQFLNAGRFVHPSND 149 Query: 157 LYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPI 214 L I + +++ L+ I + D R IY A + +++ G+ + Sbjct: 150 LTIYVREFSETGELRDILLTDDRSANIQTIYTANRAFLIKTETGPRLVMLSGQTQTLNRT 209 Query: 215 SKDISIMKFK--SYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEF 272 + +S + F +Y L +S VL + LL + + + ++++ Sbjct: 210 TDRLSFVTFTELTYDLSALIPSSKERVLNMRELFTPALLRGDQADLDRTNSTTAIFKAQA 269 Query: 273 HKRLTQWLFPVIFGLISIVAA-----DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH 327 H R ++ L +I L+ + ++ + RQ I I + + F G + I Sbjct: 270 HGRFSKPLLGMILPLLGVAVMLVGGFNRMGVSRQILASAVIIILVQMLFNA--GENAAI- 326 Query: 328 KIEQNPYYIPILYL-FLFCISSIFLLM 353 NP P++YL +F ++ +++L+ Sbjct: 327 ---SNPTMWPMIYLPIVFAVALLWMLL 350 >gi|77919518|ref|YP_357333.1| hypothetical protein Pcar_1922 [Pelobacter carbinolicus DSM 2380] gi|77545601|gb|ABA89163.1| conserved hypothetical membrane protein [Pelobacter carbinolicus DSM 2380] Length = 418 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 65/306 (21%), Positives = 123/306 (40%), Gaps = 34/306 (11%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y+LR L+ + + +IL + LV + L +L + YL+PT L + P Sbjct: 36 YLLRETLVPMLLGLAVFTLVLLLGRILNLVELVINKGVPLVDVLLLLAYLLPTFLVLTLP 95 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 F + M+ + E+L + G L P++ L +L+S+ + I+P Sbjct: 96 LSFLLGVMAGFGRMSADREILALKACGVGLRQLTAPIVGLGLLVSLATAATTIAIKPASE 155 Query: 127 STIKQ-----LSAKAQLALTFSYLEEN----LFFRLDDDLYIKISKYNPNNTLQGIFIVD 177 ++ S++A + + + + + D D + +QG+FI D Sbjct: 156 DLFREKLFHIASSRANIGIQAQIFNDEFEGIILYANDVD--------ERSGRMQGVFISD 207 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAII----LNDGEVHR-KSPISKDISIMKFKSYTLQTES 232 RD I A G I +++ + L +G +HR + +++F Y L + Sbjct: 208 ERDDTLSSIILANEGRIFSNQENLTLTLHLENGTIHRQRRETGSGFQVIEFTRYDLNLDL 267 Query: 233 ANSSTIVLKANDQNLSFLLN-------PNPNN-PNYRPELLETYRSEFHKRLTQWLFPVI 284 +S + + L P+ P+ + ELL +EFH RL + P++ Sbjct: 268 GQTSMSADQPRKNKKTMTLGELYQAIRPDAATPPSKKRELL----AEFHWRLAVPVIPLL 323 Query: 285 FGLISI 290 F L+ + Sbjct: 324 FALLGV 329 >gi|332876989|ref|ZP_08444742.1| permease, YjgP/YjgQ family [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332685097|gb|EGJ57941.1| permease, YjgP/YjgQ family [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 491 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 54/217 (24%), Positives = 99/217 (45%), Gaps = 14/217 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL +FL + +V I I I+ ++ L I+ K Y IP + Sbjct: 1 MKILDRYILTQFLTNFLGALSILVLIFVFHTIFTYIDELAGRGLELWIIGKFLIYFIPQL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIF-LFISEN 119 +P++ P + + + N E + +G S + ++ P++ L LLSI F++ N Sbjct: 61 IPIIMPLAVVISSIMTFGAFAENYEFAAMKASGISLMRVMLPLIVLMALLSIGTFFLANN 120 Query: 120 IIEPKCRS--TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT--LQGIFI 175 +I R T++ AK + A+ S E +F + +D+ IK++K + +N L + I Sbjct: 121 VIPVAYREVYTLRSNIAKVKPAMAIS---EGVFSNIGEDISIKVAKKSGDNDQFLHNVLI 177 Query: 176 -VDSRDTQTHKIYYAQSGSIDLDRQ-----AIILNDG 206 + D + +A+ G + + +IL DG Sbjct: 178 HKKTPDRVNRTVIFAKKGELKTAKTNSNFLQLILEDG 214 >gi|198283963|ref|YP_002220284.1| permease YjgP/YjgQ family protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|198248484|gb|ACH84077.1| permease YjgP/YjgQ family protein [Acidithiobacillus ferrooxidans ATCC 53993] Length = 368 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 55/230 (23%), Positives = 104/230 (45%), Gaps = 14/230 (6%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 + ++R + SFL++ L ++ I + Q+ Q + V+S L+I+L++ G +PT+L MV Sbjct: 1 MQVVRNLTISFLLTSLVVLAILAIGQLTQLLRQVASGQLPLSIILRLLGLALPTLLVMVL 60 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P F V +++ R+ E++ I +TGT L+ PV +A + I P Sbjct: 61 PLAFFFAVYLVFSNLYRSNEMVAIRSTGTGLSGLLPPVAVVAACVFCLELILSLSWAPGA 120 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT--LQGIFIVDSRDTQT 183 + ++ S + A + L+ F L I + + N+ Q IF+ ++ Q Sbjct: 121 QRELQSESVRLANAAAEAMLQPGSFTNLPGGRVIYVGQAVGKNSHRFQEIFLSVAQGGQL 180 Query: 184 -------HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSY 226 ++ AQ G++ L +L DG+ + P ++ F Y Sbjct: 181 DMATAAYGEVKPAQDGALTL-----VLVDGQRYLGQPGKAGFKVLSFARY 225 >gi|310778171|ref|YP_003966504.1| permease YjgP/YjgQ family protein [Ilyobacter polytropus DSM 2926] gi|309747494|gb|ADO82156.1| permease YjgP/YjgQ family protein [Ilyobacter polytropus DSM 2926] Length = 357 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 45/192 (23%), Positives = 86/192 (44%), Gaps = 4/192 (2%) Query: 22 FIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMN 81 FI I ++Q+++ N++ L+++ +S YL P +L P F + + + Sbjct: 25 FIFLIDIMVQMME--NIIVKGVSLLDVVRILSFYL-PPILSQTIPMGFFLGVMITYSKLT 81 Query: 82 RNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALT 141 +E +++ G S ++IKP LA+ ++ F+F + I P ++QL+ K Sbjct: 82 STSESTAMNSMGMSLNSIIKPTFMLALGITAFVFFLQESIIPNSFVKLQQLTLKIAYEKP 141 Query: 142 FSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAI 201 L+EN++ DD I I K + + + I I + ++ D A+ Sbjct: 142 AFQLKENMYIDEVDDYSIYIDKVGGDGSAENILIFKKEKDNSFPTVLTAKKAMWKD-AAM 200 Query: 202 ILNDGEVHRKSP 213 IL D E + +P Sbjct: 201 ILEDAEFYNLNP 212 >gi|206889444|ref|YP_002249741.1| putative permease, YjgP/YjgQ family [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741382|gb|ACI20439.1| putative permease, YjgP/YjgQ family [Thermodesulfovibrio yellowstonii DSM 11347] Length = 369 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 63/259 (24%), Positives = 110/259 (42%), Gaps = 36/259 (13%) Query: 16 FLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTN 75 F MSCL ++ ++++I+ S ++ Y IP + + PF + + Sbjct: 23 FSMSCLL-----SIVGLIEKIDDFMPYKPSTTFFIEYGLYSIPRYIFYLIPFVTLVTSLF 77 Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP----KCRSTIKQ 131 + + R+ E LI+ +G L+KP L L I++SI FI ++P K I++ Sbjct: 78 IFSIGVRSREFLILSVSGGRLRGLLKPFLILGIVISIVGFIFGEFLQPEFTKKLNFMIEE 137 Query: 132 LSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQG---IFI---------VDSR 179 L+ K + S +++ LF R D IKI K++ IFI +DS+ Sbjct: 138 LTQKGK-----SSIQKELFVRAKDGTVIKIGKFSQQQKKADEVKIFIIKNDALIKRIDSQ 192 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKS----PISKDISIMKFKSYTLQTESANS 235 + + + + SI D A G+V + P++ ISI FK + E Sbjct: 193 EAEIEQDQWKLKNSIVYDFVA-----GKVEKYDLMDYPLNLKISIAAFKDIK-KIEEFGI 246 Query: 236 STIVLKANDQNLSFLLNPN 254 + ++ K + L NP Sbjct: 247 AELIQKRKELKKVGLSNPK 265 >gi|254460553|ref|ZP_05073969.1| permease YjgP/YjgQ family protein [Rhodobacterales bacterium HTCC2083] gi|206677142|gb|EDZ41629.1| permease YjgP/YjgQ family protein [Rhodobacteraceae bacterium HTCC2083] Length = 381 Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 57/297 (19%), Positives = 120/297 (40%), Gaps = 12/297 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + F+ Y+L + F L +V + W+ + + + + + + ++ L+ + +P V Sbjct: 5 LARFDRYVLSQLFVLFGFFSLVLVSVYWINRAVILFDRLIADGQPASVFLEFTALSLPNV 64 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + MV P + V + +EL+++ TG S L +PV+ ++ F+ + Sbjct: 65 IRMVLPMSAFAASVYVTNRLASESELVVMQATGYSPWRLARPVVMFGFIVGTFMMVLTQY 124 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P ++ + +L+ L E F + I + P L+ +F+ D R+ Sbjct: 125 LVPSSLEQLRFRENEITGSLSSQLLREGEFMNPTKGVTFYIREITPEGVLKDVFLSDRRN 184 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFK--SYTLQTESANSS 236 Y + G + + +++ G H + ++ ++ KF SY++ + N Sbjct: 185 EGRTTTYSSVDGFLVNEPTGPKLVMVSGVTHTLNEDTRKLTKTKFTDFSYSISSLIDNPG 244 Query: 237 TIVLKAND-QNLSFLLNPN---PNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 + N Q L LL + + +LE E H R Q + V+ LI Sbjct: 245 SFYKSLNQYQTLELLLATDVVQKRSGQSTGRILE----EAHSRFNQPILCVVAALIG 297 >gi|119773933|ref|YP_926673.1| hypothetical protein Sama_0796 [Shewanella amazonensis SB2B] gi|119766433|gb|ABL99003.1| conserved hypothetical protein [Shewanella amazonensis SB2B] Length = 369 Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 65/296 (21%), Positives = 120/296 (40%), Gaps = 23/296 (7%) Query: 18 MSCLFIVFIAWVIQILQRINLVSSSTE-SLNILLKISGYLIPTVLPMVTPFCFAMETTNV 76 ++ L ++ ++ Q R+ +S E ++++ + G +P + +V P + Sbjct: 16 IAVLLVLLTVFISQHFVRVLADASDGEFPASLVVTLLGLNLPYLAVLVLPLSLFLGILMA 75 Query: 77 LTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKA 136 M E+++ G S + + L LA+L +F + P Q+ KA Sbjct: 76 HGRMYAENEMVVFHGVGVSEWYVTRVTLLLAVLNMLFTGYLSLFVTPWAEERQNQVLEKA 135 Query: 137 QLALTFSYLEENLFFRLDDDLYIK-ISKYNPNNTLQGIFIV---DSRDTQTH-KIYYAQS 191 Q + L + F D + + K +N L+ +F+ D D + A Sbjct: 136 QSEAGLAALVQGRFQTSPDGRAVLFVEKIGKDNELEKVFVAQLPDPDDEHGQINLVSAAG 195 Query: 192 GSIDLD---RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLS 248 G + D Q + LNDG ++ SP S D +++F Y +Q + K + L+ Sbjct: 196 GKVVEDASGAQQLKLNDGVRYQGSPKSLDYQVLEFGGYGMQIKEQEVDERRRKMSALPLN 255 Query: 249 FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD-KRALVRQRK 303 LL+ N PE + +E H R+ P+ L++++A R VRQ K Sbjct: 256 QLLDQN------TPEAV----AELHWRIA---IPLAIPLMTLIAVPMARVNVRQGK 298 >gi|322418227|ref|YP_004197450.1| permease YjgP/YjgQ family protein [Geobacter sp. M18] gi|320124614|gb|ADW12174.1| permease YjgP/YjgQ family protein [Geobacter sp. M18] Length = 387 Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 59/290 (20%), Positives = 119/290 (41%), Gaps = 10/290 (3%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 YI I FL+ + F+ + + L+ +V +L++ YL+P+ P Sbjct: 8 YIFNEIPPPFLVGMVAFTFVLLMGRFLKLAEMVVEKGVPFTDVLRMVSYLLPSFWLFTIP 67 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + ++ ++E+ + + G S L+ P L ++L S+ P Sbjct: 68 MALLLSILLAFGRLSGDSEVTAMKSCGISLYGLLPPPLVFSLLASLACLWVTVYAVPWGN 127 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSRDTQTHK 185 S+ K+L + ++E +F D+ I + ++G+ + D RD + Sbjct: 128 SSFKKLMLEIARNSASVSIKEKVFNNAFPDMVIYADTLDTKAQNMEGVIVHDERDPKAPT 187 Query: 186 IYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST-IVL 240 +A SG++ D +A L +G +HR S + +++F+ Y L+ A + Sbjct: 188 TIFAASGALFSDPKAHSMEFQLKNGSIHR-SEDGANYRMVQFQEYILRVALAEPTPKGPR 246 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 KA++ + L++P P + L R E H RL ++F + + Sbjct: 247 KASEMTIDELVHP-PQVAAAKDVL--ARRLELHSRLALPFSCIVFTFVGV 293 >gi|160876367|ref|YP_001555683.1| permease YjgP/YjgQ family protein [Shewanella baltica OS195] gi|160861889|gb|ABX50423.1| permease YjgP/YjgQ family protein [Shewanella baltica OS195] gi|315268557|gb|ADT95410.1| permease YjgP/YjgQ family protein [Shewanella baltica OS678] Length = 370 Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 76/315 (24%), Positives = 131/315 (41%), Gaps = 24/315 (7%) Query: 47 NILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFL 106 ++++ + G +P ++ +V P + M E++I+ G S + + L L Sbjct: 46 SLIMTLIGLNLPYLVILVLPLSLFLGILLAHGRMYSENEMVILHGVGVSEWYVTRVTLIL 105 Query: 107 AILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIK-ISKYN 165 A++ +F + P Q+ KAQ + L + F + + + + Sbjct: 106 AVINMLFTGYLSLYVAPWAEEQQNQVLEKAQSEAGLAALVQGRFQASPNGRAVLFVERIG 165 Query: 166 PNNTLQGIFIVDSRD----TQTHKIYYAQSGSIDLD---RQAIILNDGEVHRKSPISKDI 218 +N L +F+ D T + A+ G + D Q + LNDG ++ SP +KD Sbjct: 166 KDNELDKVFVAQLPDPDDETGVTNVVVAKGGRVQEDSSGAQQLNLNDGVRYQGSPKAKDY 225 Query: 219 SIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQ 278 +++F Y +Q + + + LS L P + + E E +EFH RL Sbjct: 226 QMIEFGGYKMQIKEQQ-----VDERRRKLSAL----PVDELVKVEGAEAV-AEFHWRLAI 275 Query: 279 WLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 L I LI++ A R VRQ K +F ++ + G F G K Q+ IP Sbjct: 276 PLAIPIMTLIAVPLA--RVNVRQ-GKFAKMFPAVLLYLGYF-GLMVAGRKALQDG-IIP- 329 Query: 339 LYLFLFCISSIFLLM 353 LYL ++ I LLM Sbjct: 330 LYLGMWWIHISALLM 344 >gi|323163036|gb|EFZ48869.1| hypothetical protein ECE128010_0632 [Escherichia coli E128010] Length = 150 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 41/137 (29%), Positives = 65/137 (47%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSSQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQ 137 P + I QL ++Q Sbjct: 121 GRPWAYAQIYQLEQQSQ 137 >gi|189425645|ref|YP_001952822.1| permease YjgP/YjgQ family protein [Geobacter lovleyi SZ] gi|189421904|gb|ACD96302.1| permease YjgP/YjgQ family protein [Geobacter lovleyi SZ] Length = 379 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 55/235 (23%), Positives = 96/235 (40%), Gaps = 17/235 (7%) Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P F + ++ + E+ ++ G S TL+ PVL A ++ + P Sbjct: 68 PMAFLLAVLLAFGRLSNDNEITVLKACGLSLGTLLPPVLLTAAAAALLTLFISVVAVPWG 127 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDL---YIKISKYN-PNNTLQGIFIVDSRDT 181 + KQ++ S + E +F DDL + + +Y+ T+Q + I DSRD Sbjct: 128 NTGFKQMTMDVARKYAASAIRERIF---RDDLPGIVLYVDQYDEARRTMQRVMIQDSRDP 184 Query: 182 QTHKIYYAQSGSIDLDRQ----AIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + +A+SG + D I+L +G +H + D ++ F Y L ES S+ Sbjct: 185 ERPLTIFAKSGLVSSDEVNGVLRILLKNGSIHTQH--KNDYRLVSFGEYLLTAESGRSTP 242 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 V D + L +P P+ +E H R + FP + +I+A Sbjct: 243 PVRTELDLGIGELQR-GSRSPQLAPQARLKMATELHSR---FAFPCATFVFAILA 293 >gi|159043739|ref|YP_001532533.1| permease YjgP/YjgQ family protein [Dinoroseobacter shibae DFL 12] gi|157911499|gb|ABV92932.1| permease YjgP/YjgQ family protein [Dinoroseobacter shibae DFL 12] Length = 380 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 55/286 (19%), Positives = 120/286 (41%), Gaps = 15/286 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKIS----GYL 56 + ++ YIL + +F L IV I W+ + ++ +S + L + ++S YL Sbjct: 2 LARYDRYILGRLMVTFGFFTLIIVLIYWINRSIRLFERLSGDGQGLALFAQLSLLSLPYL 61 Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 I +LP+ F A+ T N M ++E + + G S +++P L++ ++ + + + Sbjct: 62 IYLMLPLAA-FASAVSTGN---RMGSDSETVALQAAGISAFRIVRPALYMGVMAAALMLL 117 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 +++ P R I L + ++ LE F D + + +++ L + + Sbjct: 118 LAHLLVPMSRVAIADLEEQLADEVSARLLEPGKFQSPIDGVTVFVAEITGEGVLSKVLLS 177 Query: 177 DSRDTQTHKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 D RD IY A + D Q ++++ ++ +S ++F+ + L Sbjct: 178 DQRDPAEEVIYTANQALLVRSDTGPQLVMISGLAQFLRA--DGTLSTLQFEDFALGLGEV 235 Query: 234 N--SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLT 277 ++ + + LL +P + + + SE H+RL Sbjct: 236 EVPEDRVLRDLRGWDTARLLRADPADLESVGKSRGAFLSEAHRRLA 281 >gi|261749398|ref|YP_003257083.1| hypothetical protein BPLAN_316 [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497490|gb|ACX83940.1| conserved hypothetical protein [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 395 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 33/128 (25%), Positives = 65/128 (50%) Query: 48 ILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLA 107 I+LK Y +++P+V P + + ++ + EL+ I ++G S ++KP+L + Sbjct: 13 IILKFIYYFGISIIPLVIPISILLTSIITYGYISESQELIAIKSSGISLFRVMKPLLCIT 72 Query: 108 ILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN 167 LLS+ L+ + P+ + ++L + + L+E +F L D +IKI K + Sbjct: 73 FLLSVGLYFFSDFSIPEAKRKAQELGYQISITHPSLRLKEGVFVNLFPDFFIKIGKKKNS 132 Query: 168 NTLQGIFI 175 L+ +FI Sbjct: 133 KLLENLFI 140 >gi|304410148|ref|ZP_07391767.1| permease YjgP/YjgQ family protein [Shewanella baltica OS183] gi|307302141|ref|ZP_07581899.1| permease YjgP/YjgQ family protein [Shewanella baltica BA175] gi|304351557|gb|EFM15956.1| permease YjgP/YjgQ family protein [Shewanella baltica OS183] gi|306914179|gb|EFN44600.1| permease YjgP/YjgQ family protein [Shewanella baltica BA175] Length = 370 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 76/315 (24%), Positives = 131/315 (41%), Gaps = 24/315 (7%) Query: 47 NILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFL 106 ++++ + G +P ++ +V P + M E++I+ G S + + L L Sbjct: 46 SLIMTLIGLNLPYLVILVLPLSLFLGILLAHGRMYSENEMVILHGVGVSEWYVTRVTLIL 105 Query: 107 AILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIK-ISKYN 165 A++ +F + P Q+ KAQ + L + F + + + + Sbjct: 106 AVINMLFTGYLSLYVAPWAEEQQNQVLEKAQSEAGLAALVQGRFQASPNGRAVLFVERIG 165 Query: 166 PNNTLQGIFIVDSRD----TQTHKIYYAQSGSIDLD---RQAIILNDGEVHRKSPISKDI 218 +N L +F+ D T + A+ G + D Q + LNDG ++ SP +KD Sbjct: 166 KDNELDKVFVAQLPDPDDETGVTNVVVAKGGRVQEDSSGAQQLNLNDGVRYQGSPKAKDY 225 Query: 219 SIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQ 278 +++F Y +Q + + + LS L P + + E E +EFH RL Sbjct: 226 QMIEFGGYKMQIKEQQ-----VDERRRKLSAL----PVDELVKIEGAEAV-AEFHWRLAI 275 Query: 279 WLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 L I LI++ A R VRQ K +F ++ + G F G K Q+ IP Sbjct: 276 PLAIPIMTLIAVPLA--RVNVRQ-GKFAKMFPAVLLYLGYF-GLMVAGRKALQDG-IIP- 329 Query: 339 LYLFLFCISSIFLLM 353 LYL ++ I LLM Sbjct: 330 LYLGMWWIHISALLM 344 >gi|300718281|ref|YP_003743084.1| permease [Erwinia billingiae Eb661] gi|299064117|emb|CAX61237.1| Putative permease [Erwinia billingiae Eb661] Length = 356 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 52/234 (22%), Positives = 97/234 (41%), Gaps = 14/234 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E YI I R ++ F+V + + + ++ T +L ++ + Y + Sbjct: 1 MSLIERYITVEIRRLVMVIVGFLVVMFASYSAQRYLTDAANGTLALQVVFDVVCYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + T L + ++E+ I G S + L K VLFLAI L++ + + Sbjct: 61 LEMLLPVGLYVATAVALGQLYTDSEITAIFAAGASPVRLYKAVLFLAIPLAVVVTLLSLY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P I +L ++Q L S+L+ N F + S+ +P + ++ SR Sbjct: 121 GRPWAYGNIYRLEQQSQSVLDVSHLQANKFNVNGSGRMVMASRIDPASHQLTDALIYSRS 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + +Y A S +++ D SP + +++ +Y L E A Sbjct: 181 GKNTNLYRAHS---------VVVTD-----PSPATPSVNLRNGTAYVLDREGAQ 220 >gi|126175309|ref|YP_001051458.1| permease YjgP/YjgQ family protein [Shewanella baltica OS155] gi|217972440|ref|YP_002357191.1| permease YjgP/YjgQ family protein [Shewanella baltica OS223] gi|125998514|gb|ABN62589.1| permease YjgP/YjgQ family protein [Shewanella baltica OS155] gi|217497575|gb|ACK45768.1| permease YjgP/YjgQ family protein [Shewanella baltica OS223] Length = 370 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 75/315 (23%), Positives = 131/315 (41%), Gaps = 24/315 (7%) Query: 47 NILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFL 106 ++++ + G +P ++ +V P + M E++++ G S + + L L Sbjct: 46 SLIMTLIGLNLPYLVILVLPLSLFLGILLAHGRMYSENEMVVLHGVGVSEWYVTRVTLIL 105 Query: 107 AILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIK-ISKYN 165 A++ +F + P Q+ KAQ + L + F + + + + Sbjct: 106 AVINMLFTGYLSLYVAPWAEEQQNQVLEKAQSEAGLAALVQGRFQASPNGRAVLFVERIG 165 Query: 166 PNNTLQGIFIVDSRD----TQTHKIYYAQSGSIDLD---RQAIILNDGEVHRKSPISKDI 218 +N L +F+ D T + A+ G + D Q + LNDG ++ SP +KD Sbjct: 166 KDNELDKVFVAQLPDPDDETGVTNVVVAKGGRVQEDSSGAQQLNLNDGVRYQGSPKAKDY 225 Query: 219 SIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQ 278 +++F Y +Q + + + LS L P + + E E +EFH RL Sbjct: 226 QMIEFGGYKMQIKEQQ-----VDERRRKLSAL----PVDELVKIEGAEAV-AEFHWRLAI 275 Query: 279 WLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 L I LI++ A R VRQ K +F ++ + G F G K Q+ IP Sbjct: 276 PLAIPIMTLIAVPLA--RVNVRQ-GKFAKMFPAVLLYLGYF-GLMVAGRKALQDG-IIP- 329 Query: 339 LYLFLFCISSIFLLM 353 LYL ++ I LLM Sbjct: 330 LYLGMWWIHISALLM 344 >gi|294084200|ref|YP_003550958.1| hypothetical protein SAR116_0631 [Candidatus Puniceispirillum marinum IMCC1322] gi|292663773|gb|ADE38874.1| hypothetical membrane spanning protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 364 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 54/254 (21%), Positives = 111/254 (43%), Gaps = 5/254 (1%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 F +YI + R+ + + ++ I W+ Q ++ + LV + + L +S +IP L + Sbjct: 3 FNIYIFNQLFRATCVISMVLIGIMWLFQTIKLLELVVNKGAPIFDFLLMSITVIPLWLTI 62 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + V + + EL ++ G S L K + L +LL+ L+ + + P Sbjct: 63 ALPIAGFVAVNWVFHRILADRELTVMQAVGLSPAQLAKAPIALGMLLTSVLYFNSVYLLP 122 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 K L + + L++ +F + L + I N+ + +FI D+R Sbjct: 123 TSFGIYKDLQFNLRNGIPVILLQDGVFTEVVPGLTMFIGSREENDVVSDVFIQDTRTIDK 182 Query: 184 HKIYYAQSGS-IDLD-RQAIILNDGEVHRKSPISKDISIMKFKSYTLQ---TESANSSTI 238 I A++G + D +IL +G+ + + +++ F++++L E S I Sbjct: 183 TIILTAENGKFVGKDYHPTLILGNGQRLEVNSDGESGALLLFETHSLSLVTNEKKPSERI 242 Query: 239 VLKANDQNLSFLLN 252 N+ ++S LL+ Sbjct: 243 ANDMNEDSISNLLD 256 >gi|197119769|ref|YP_002140196.1| membrane protein [Geobacter bemidjiensis Bem] gi|197089129|gb|ACH40400.1| membrane protein, YjgP-related protein [Geobacter bemidjiensis Bem] Length = 391 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 62/320 (19%), Positives = 130/320 (40%), Gaps = 15/320 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K+ YI + I FL+ + F+ + + L+ +V + ++++ YL+P Sbjct: 7 KTLYAYIFKEIPTPFLVGMVTFTFVLLMGRFLKLAEMVVEKGIPFSDVVRMVAYLLPPFW 66 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + ++ ++E+ + + G S L+ P + A ++ Sbjct: 67 LFTIPMALLLAMLLAFGRLSGDSEITAMKSCGISLYGLLPPPMLFAACATLACLWVTVYA 126 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSRD 180 P S K+L + + ++E +F + + + T+ G+ + D RD Sbjct: 127 VPWGNSGFKKLMVEIAQSSAGIAIKEKIFNNAFPGMVVYTQSLDTKAQTMGGVIVHDERD 186 Query: 181 TQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 +T +A +G++ D ++ L +G +HR +++F+ Y L+ A+ S Sbjct: 187 PRTPTTIFASTGALVSDPKSNSMEFQLRNGSIHRAEE-QGGYRMVQFQEYNLRVALADGS 245 Query: 237 T-IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 K ++ L LL+P P + E++ + E+H RL +F L++I Sbjct: 246 NKATRKVSEMTLDELLHP-PKGTQQK-EII-SRDLEYHSRLALPFSCFVFTLLAIPLG-- 300 Query: 296 RALVRQRKKIHPIFISLSIS 315 ++ R+ SLSI Sbjct: 301 ---IQNRRSGKAAGFSLSIG 317 >gi|313668051|ref|YP_004048335.1| hypothetical protein NLA_7130 [Neisseria lactamica ST-640] gi|313005513|emb|CBN86949.1| conserved hypothetical integral membrane protein [Neisseria lactamica 020-06] Length = 392 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 46/223 (20%), Positives = 106/223 (47%), Gaps = 11/223 (4%) Query: 15 SFLMSCLFIVFIAWVIQILQRINLVSSSTE---SLNILLKISGYLIPTVLPMVTPFCFAM 71 SF +F+V +A V+ Q INL+ + + +++ +L + G+ I + P++ + Sbjct: 33 SFTAVGIFVVLLA-VLVSTQAINLLGRAADGRVAIDAVLALVGFWIIGMTPLLLVLTAFI 91 Query: 72 ETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP----KCRS 127 T VLT R++E+ + + G + I+PV+ A+ ++ + + + + P + R Sbjct: 92 STLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWVMPWAELRSRE 151 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 + L K +L+L + N + + +Y + + ++ +F+ + I Sbjct: 152 YAEILKQKQELSLVEAG-RFNTLGKRNGRVYFVETFDTESGIMKNLFLREQDKNGNDNII 210 Query: 188 YAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 +A+ G+ L +++A+ L DG + +P D + + F+ +L Sbjct: 211 FAKEGNFSLNNNKRALELRDGYRYSGTPGKADYNRVSFRHLSL 253 >gi|309378516|emb|CBX22869.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 371 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 46/223 (20%), Positives = 106/223 (47%), Gaps = 11/223 (4%) Query: 15 SFLMSCLFIVFIAWVIQILQRINLVSSSTE---SLNILLKISGYLIPTVLPMVTPFCFAM 71 SF +F+V +A V+ Q INL+ + + +++ +L + G+ I + P++ + Sbjct: 12 SFTAVGIFVVLLA-VLVSTQAINLLGRAADGRVAIDAVLALVGFWIIGMTPLLLVLTAFI 70 Query: 72 ETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP----KCRS 127 T VLT R++E+ + + G + I+PV+ A+ ++ + + + + P + R Sbjct: 71 STLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWVMPWAELRSRE 130 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 + L K +L+L + N + + +Y + + ++ +F+ + I Sbjct: 131 YAEILKQKQELSLVEAG-RFNTLGKRNGRVYFVETFDTESGIMKNLFLREQDKNGNDNII 189 Query: 188 YAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 +A+ G+ L +++A+ L DG + +P D + + F+ +L Sbjct: 190 FAKEGNFSLNNNKRALELRDGYRYSGTPGKADYNRVSFRHLSL 232 >gi|254251665|ref|ZP_04944983.1| hypothetical protein BDAG_00857 [Burkholderia dolosa AUO158] gi|124894274|gb|EAY68154.1| hypothetical protein BDAG_00857 [Burkholderia dolosa AUO158] Length = 364 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 52/219 (23%), Positives = 97/219 (44%), Gaps = 19/219 (8%) Query: 48 ILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLA 107 I L + GYL V+ +VT F + VLT R++E+++ +G S LIKP+ A Sbjct: 52 IGLTVIGYL--AVMLVVTLFVSIL---FVLTRWYRDSEMVVWLASGVSLTRLIKPIGVFA 106 Query: 108 ----ILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIK-IS 162 +L++ F F+ P K + A+ Q S L F + + I Sbjct: 107 TPIIVLIAFFAFVGW----PWSNQQSKMIKARFQQRDEISLLAPGQFRESAANHRVFFIE 162 Query: 163 KYNPNNT-LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDI 218 K P+ + +Q +F+ + + + + + +Q+G + + ++L DG + +P + Sbjct: 163 KMTPDQSKVQNVFVTSTENGKVN-VVVSQTGHTETSKDGDRFVVLEDGRRYDGTPGQPNF 221 Query: 219 SIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNN 257 IM+F+ Y ++ S + + L L NP +N Sbjct: 222 KIMEFERYGVKITSKPIVNVPTTSGTPTLELLRNPTRDN 260 >gi|300725026|ref|YP_003714352.1| putative transmembrane protein, transport [Xenorhabdus nematophila ATCC 19061] gi|297631569|emb|CBJ92278.1| putative transmembrane protein, transport [Xenorhabdus nematophila ATCC 19061] Length = 366 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 54/254 (21%), Positives = 106/254 (41%), Gaps = 25/254 (9%) Query: 47 NILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFL 106 N+++ + G +P + ++ P + + + +E+ ++ G + L+K L L Sbjct: 46 NLVISLLGLGVPEMAQLILPLSLFLGVLMTFSKLYTESEITVMHACGLGKSVLVKSALIL 105 Query: 107 AILLSIFLFISENIIE--PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD---LYIKI 161 A+L SI + N+I P+ Q+ A A+ + + + E F D LYI Sbjct: 106 ALLTSIL--AAANVIWFIPESSKYQAQVLADAKTNPSLAAIMEGQFKPSRDGNMVLYIGN 163 Query: 162 SKYNPNNTLQGIFIVDSRDTQTHK--IYYAQSGSIDL---DRQAIILNDGEVHRKSPISK 216 K NT + +F+ R T + + +A G ++ Q +L+ G + + + + Sbjct: 164 VK---GNTFENVFLAQLRSTNDQRPSVIFADGGHMEERPNGNQVAVLHQGTRYEGTALLR 220 Query: 217 DISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRL 276 D I +F +Y + K ++L L + ++ R+EFH RL Sbjct: 221 DFRITEFTNYQAVIGHQRADIDNNKVEQKSLEQLWHATDDDS----------RAEFHWRL 270 Query: 277 TQWLFPVIFGLISI 290 T L +I L+ + Sbjct: 271 TLILSVLIMALMVV 284 >gi|319789793|ref|YP_004151426.1| permease YjgP/YjgQ family protein [Thermovibrio ammonificans HB-1] gi|317114295|gb|ADU96785.1| permease YjgP/YjgQ family protein [Thermovibrio ammonificans HB-1] Length = 359 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 47/183 (25%), Positives = 73/183 (39%), Gaps = 17/183 (9%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 +P L +V P F + V MN N EL + G S L KPV L ++ S+ F Sbjct: 57 LPAFLGIVIPMSFVLSVVIVFIGMNSNNELTAAKSCGISLKELSKPVFLLGLIFSLLSFY 116 Query: 117 SENIIEPKCRSTIKQ-----LSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQ 171 S + PK +K+ L K L++T N + + K P L Sbjct: 117 SLMFLAPKSNVAMKRELEELLRKKITLSITEKRFSSNF-----PGVTFYVEKLYPEKGLL 171 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILN--DGE---VHRKSPISKDISIMKFKSY 226 F+ + + + + G + + L+ DG V K P K+ +KFKSY Sbjct: 172 VNFMASLQKKEKLVTAFGRRGFLRTKGDTVFLDIEDGSAQVVDWKKP--KEFKFIKFKSY 229 Query: 227 TLQ 229 T++ Sbjct: 230 TVE 232 >gi|114768924|ref|ZP_01446550.1| Predicted permease [alpha proteobacterium HTCC2255] gi|114549841|gb|EAU52722.1| Predicted permease [alpha proteobacterium HTCC2255] Length = 407 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 47/234 (20%), Positives = 96/234 (41%), Gaps = 2/234 (0%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y+ + + F C I I + Q L I++V+ + + I+ ++S ++P VL Sbjct: 39 YLFKQLIGPFAFFCFIISGILLLNQALGIIDIVTENGQPAYIVFELSFLILPKVLITAIS 98 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + + ++ + ELL++ + G S I L KP L IL++ LF+ + + P Sbjct: 99 ISGFIASVLIINRLYNEEELLVMMSIGRSFIELSKPFLLFGILIASLLFLVVHNLNPYAH 158 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 S + + + ++ + F + N L I I + T Sbjct: 159 SKFIEAQERIKKEYVTQIIKPDQFISYQNKYTFFFGDKGNNGELSEILIEEQITPDTTLT 218 Query: 187 YYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + A++G + + D A++L +G + +S S+++F + TI Sbjct: 219 HIAKNGQVIANKDSNALLLRNGSTQSYNKVSGTFSLLQFDTLVFDLNQLRKDTI 272 >gi|153001631|ref|YP_001367312.1| permease YjgP/YjgQ family protein [Shewanella baltica OS185] gi|151366249|gb|ABS09249.1| permease YjgP/YjgQ family protein [Shewanella baltica OS185] Length = 370 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 60/265 (22%), Positives = 109/265 (41%), Gaps = 20/265 (7%) Query: 47 NILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFL 106 ++++ + G +P ++ +V P + M E++++ G S + + L L Sbjct: 46 SLIMTLIGLNLPYLVILVLPLSLFLGILLAHGRMYSENEMVVLHGVGVSEWYVTRVTLIL 105 Query: 107 AILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIK-ISKYN 165 A++ +F + P Q+ KAQ + L + F + + + + Sbjct: 106 AVINMLFTGYLSLYVAPWAEEQQNQVLEKAQSEAGLAALVQGRFQASPNGRAVLFVERIG 165 Query: 166 PNNTLQGIFIVDSRD----TQTHKIYYAQSGSIDLD---RQAIILNDGEVHRKSPISKDI 218 +N L +F+ D T + A+ G + D Q + LNDG ++ SP +KD Sbjct: 166 KDNELDKVFVAQLPDPDDETGVTNVVVAKGGRVQEDSTGAQQLNLNDGVRYQGSPKAKDY 225 Query: 219 SIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQ 278 +++F Y +Q + + + LS L P + + E E +EFH RL Sbjct: 226 QMIEFGGYKMQIKEQQ-----VDERRRKLSAL----PVDELVKIEGAEAV-AEFHWRLAI 275 Query: 279 WLFPVIFGLISIVAADKRALVRQRK 303 L I LI++ A R VRQ K Sbjct: 276 PLAIPIMTLIAVPLA--RVNVRQGK 298 >gi|149196258|ref|ZP_01873313.1| permease YjgP/YjgQ [Lentisphaera araneosa HTCC2155] gi|149140519|gb|EDM28917.1| permease YjgP/YjgQ [Lentisphaera araneosa HTCC2155] Length = 358 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 43/82 (52%) Query: 56 LIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLF 115 LIP + P + T +S+NRN E++ + + G S L P+ ++L+ I L+ Sbjct: 57 LIPDKFTYIAPMSLLLATIYCFSSLNRNHEVIAMRSAGLSLTKLSAPIYLFSVLVGISLY 116 Query: 116 ISENIIEPKCRSTIKQLSAKAQ 137 +S +EP CR +L+ +A+ Sbjct: 117 LSSQYLEPYCRLKTFELNTRAE 138 >gi|241760314|ref|ZP_04758409.1| permease, YjgP/YjgQ family [Neisseria flavescens SK114] gi|319637672|ref|ZP_07992438.1| hypothetical protein HMPREF0604_00061 [Neisseria mucosa C102] gi|241319192|gb|EER55670.1| permease, YjgP/YjgQ family [Neisseria flavescens SK114] gi|317400827|gb|EFV81482.1| hypothetical protein HMPREF0604_00061 [Neisseria mucosa C102] Length = 371 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 47/223 (21%), Positives = 106/223 (47%), Gaps = 11/223 (4%) Query: 15 SFLMSCLFIVFIAWVIQILQRINLVSSSTE---SLNILLKISGYLIPTVLPMVTPFCFAM 71 SF +F+V +A V+ Q INL+ + + +++ +L + G+ + + P++ + Sbjct: 12 SFTAVGIFVVLLA-VLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTPLLLVLTAFI 70 Query: 72 ETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP----KCRS 127 T VLT R++E+ + + G + I+PV+ A+ +I + + + + P + R Sbjct: 71 STLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAILIAVMQLWVMPWAELRSRE 130 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 + L K +L+L + NL R + +Y + + ++ +F+ + I Sbjct: 131 YAEILKQKQELSLVEAGEFNNLGKR-NGRVYFVETFDTESGIMKNLFLREQDKNGNDNIV 189 Query: 188 YAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 +A+ G+ L +++ + L DG + +P D + + F+ +L Sbjct: 190 FAKEGNFSLTDNKRTLELRDGYRYSGTPGKADYNRVSFQHLSL 232 >gi|148270164|ref|YP_001244624.1| permease YjgP/YjgQ family protein [Thermotoga petrophila RKU-1] gi|281412494|ref|YP_003346573.1| permease YjgP/YjgQ family protein [Thermotoga naphthophila RKU-10] gi|147735708|gb|ABQ47048.1| permease YjgP/YjgQ family protein [Thermotoga petrophila RKU-1] gi|281373597|gb|ADA67159.1| permease YjgP/YjgQ family protein [Thermotoga naphthophila RKU-10] Length = 1061 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 78/170 (45%), Gaps = 2/170 (1%) Query: 1 MKSFELYILRCIGRSFLMS-CLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPT 59 MK Y+L+ FL+ FIVF++ I + Q +L+ + L + Y +P Sbjct: 1 MKVLIKYLLKLSVVPFLIGLGGFIVFVSLEI-LYQLSDLIVRHRVGIEKLFLMLYYYLPY 59 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + M P + + ++ EL+ I G S+ LI P L L LLSI +F + Sbjct: 60 FVAMGVPVGVLLAIFWTFSRLSEERELMAIQVHGISQKNLIVPFLILGALLSIAVFFLSD 119 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT 169 I P+ +S ++ +K L ++ EN+ ++ DD Y + KY+ + Sbjct: 120 QIVPEYQSKAEEAMSKYVLKKPEVFVVENVISKIGDDQYFYVEKYDERTS 169 >gi|170288881|ref|YP_001739119.1| permease YjgP/YjgQ family protein [Thermotoga sp. RQ2] gi|170176384|gb|ACB09436.1| permease YjgP/YjgQ family protein [Thermotoga sp. RQ2] Length = 1061 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 78/170 (45%), Gaps = 2/170 (1%) Query: 1 MKSFELYILRCIGRSFLMS-CLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPT 59 MK Y+L+ FL+ FIVF++ I + Q +L+ + L + Y +P Sbjct: 1 MKVLIKYLLKLSVVPFLIGLGGFIVFVSLEI-LYQLSDLIVRHRVGIEKLFLMLYYYLPY 59 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + M P + + ++ EL+ I G S+ LI P L L LLSI +F + Sbjct: 60 FVAMGVPVGVLLAIFWTFSRLSEERELMAIQVHGISQKNLIVPFLILGALLSIAVFFLSD 119 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT 169 I P+ +S ++ +K L ++ EN+ ++ DD Y + KY+ + Sbjct: 120 QIVPEYQSKAEEAMSKYVLKKPEVFVVENVISKIGDDQYFYVEKYDERTS 169 >gi|86605800|ref|YP_474563.1| YjgP/YjgQ family protein [Synechococcus sp. JA-3-3Ab] gi|86554342|gb|ABC99300.1| putative membrane protein, YjgP/YjgQ family [Synechococcus sp. JA-3-3Ab] Length = 376 Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 57/248 (22%), Positives = 105/248 (42%), Gaps = 43/248 (17%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 +P ++ + P T L ++ N+E+ + G + +P+L + +L+S+ F Sbjct: 64 LPEMVLLGMPIAAFFATMLTLGKLSGNSEITAMRAAGIPFTRIFRPLLLVGLLMSLSAFW 123 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFR------LDDDLYIKISKYNPN-NT 169 N++ P + I+Q+ +A LA + ++ ++FFR +D+L+ I + +P NT Sbjct: 124 ISNVLLPASKREIRQIDQQALLARATTPVQYDVFFRTARVGGTEDNLWFFIRQVDPRLNT 183 Query: 170 LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAI------ILNDGEVHRKSPISKDISIMKF 223 +Q + I+ K A+ + L QA+ L++G HR P ++ F Sbjct: 184 MQDVTILQVDPLPGGKYQLAE---VTLAAQAVWNGLDWTLSEGVTHRYGPDGLSLAEEPF 240 Query: 224 KSYTLQTESANSSTIVLKANDQNLSFLLNPN-PNNPNYRPELLE-------------TYR 269 L+ Q+L+ L+ P P N PEL E R Sbjct: 241 DRKPLEV-------------SQDLAALMQPPVPPNELSLPELAERISRLARSNLNTQPLR 287 Query: 270 SEFHKRLT 277 +EFH R + Sbjct: 288 TEFHMRFS 295 >gi|330813916|ref|YP_004358155.1| putative permease YjgP/YjgQ family protein [Candidatus Pelagibacter sp. IMCC9063] gi|327487011|gb|AEA81416.1| putative permease YjgP/YjgQ family protein [Candidatus Pelagibacter sp. IMCC9063] Length = 358 Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 80/357 (22%), Positives = 159/357 (44%), Gaps = 23/357 (6%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y + I RS+ + F+ W+ Q + + L++ S+++ + Y +P ++ + Sbjct: 9 YFIAEILRSYAFVLATLSFLIWIAQSARFLYLITDMGLSMSVYVPYILYQLPKIVSQMML 68 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 F + + N E+ I +G S+ T++ +L ++++ + F + P Sbjct: 69 ISFLISLFISIIKFQNNKEMEIYWLSGVSKKTIVWTILKISLVPTFVAFFLYIYLAPMTG 128 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 + + A ++ + +++N F +L + + + + L+ +++ ++ T K Sbjct: 129 LISRNILANSEFTFVNALVKKNNFNSPFRNLTVYVGENDNRGNLEKVYLFENNKTIIAK- 187 Query: 187 YYAQSGSIDLDRQAII-LNDGEVHRKSPISKDISIMKFKS--YTLQTESANSSTIVLKAN 243 Q +++D + + L DG +H+K+ K I I+KF+ Y +N +T K Sbjct: 188 ---QGKVLNVDNKNYLQLIDGFIHQKNKNGK-IQIIKFEETLYDFTKYKSNLTTYP-KLQ 242 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLF-PVIFGLISIV---AADKRALV 299 +++L +L N NN R E T E HKR+ + LF P+I L + +K LV Sbjct: 243 ERSLLWLFNELKNN---RKEKNNTI-FEIHKRIFKPLFIPIIALLCCFILYGNNEKFNLV 298 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + R I SLS+ F +F F +I N ++ LY F C+ I + K Sbjct: 299 KLRFSI----FSLSVLFIIF--FEILISLSSSNIFFQYFLYSFPMCVGIIIYFFLHK 349 >gi|261379717|ref|ZP_05984290.1| permease, YjgP/YjgQ family [Neisseria subflava NJ9703] gi|284797387|gb|EFC52734.1| permease, YjgP/YjgQ family [Neisseria subflava NJ9703] Length = 371 Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 46/223 (20%), Positives = 106/223 (47%), Gaps = 11/223 (4%) Query: 15 SFLMSCLFIVFIAWVIQILQRINLVSSSTE---SLNILLKISGYLIPTVLPMVTPFCFAM 71 SF +F+V +A V+ Q INL+ + + +++ +L + G+ + + P++ + Sbjct: 12 SFTAVGIFVVLLA-VLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTPLLLVLTAFI 70 Query: 72 ETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP----KCRS 127 T VLT R++E+ + + G + I+PV+ A+ +I + + + + P + R Sbjct: 71 STLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAILIAVMQLWVMPWAELRSRE 130 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 + L K +L+L + E N + + +Y + + ++ +F+ + I Sbjct: 131 YAEILKQKQELSLVEAG-EFNSLGKRNGRVYFVETFDTESGIMKNLFLREQDKNGNDNIV 189 Query: 188 YAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 +A+ G+ L +++ + L DG + +P D + + F+ +L Sbjct: 190 FAKEGNFSLTDNKRTLELRDGYRYSGTPGKADYNRVSFQHLSL 232 >gi|15644481|ref|NP_229533.1| hypothetical protein TM1735 [Thermotoga maritima MSB8] gi|4982312|gb|AAD36800.1|AE001812_10 conserved hypothetical protein [Thermotoga maritima MSB8] Length = 1074 Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 2/164 (1%) Query: 7 YILRCIGRSFLMS-CLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+L+ FL+ FIVF++ I + Q +L+ + L + Y +P + M Sbjct: 20 YLLKLSVVPFLIGLGGFIVFVSLEI-LYQLSDLIVRHRVGIEKLFLMLYYYLPYFVAMGV 78 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + + ++ EL+ I G S+ LI P L L LLSI +F + I P+ Sbjct: 79 PVGVLLAIFWTFSRLSEERELMAIQVHGISQKNLIVPFLILGALLSIAVFFLSDQIVPEY 138 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT 169 +S ++ +K L ++ EN+ ++ DD Y + KY+ + Sbjct: 139 QSKAEEAMSKYVLKKPEVFVVENVISKIGDDQYFYVEKYDERTS 182 >gi|86607080|ref|YP_475843.1| YjgP/YjgQ family protein [Synechococcus sp. JA-3-3Ab] gi|86555622|gb|ABD00580.1| putative membrane protein, YjgP/YjgQ family [Synechococcus sp. JA-3-3Ab] Length = 392 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 33/137 (24%), Positives = 59/137 (43%), Gaps = 6/137 (4%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 +P +L + P T L M ++E+ + G ++ PVL + +L+S + Sbjct: 84 LPAILVVTFPIAGLFATLLTLGRMGADSEITALRAAGIPYRKVLIPVLCIGLLVSGLALL 143 Query: 117 SENIIEPKCRSTIKQLSAK---AQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI 173 + +I P+ +K L+ AQ AL F E R+DDDL+ + +P Sbjct: 144 TNEVIVPETNQKVKTLNTNLILAQDALPFDSEE---IVRVDDDLWFHVGSIDPKTGWMRD 200 Query: 174 FIVDSRDTQTHKIYYAQ 190 ++ R +T + Y Q Sbjct: 201 LLILDRKAETGHLRYPQ 217 >gi|296315184|ref|ZP_06865125.1| permease, YjgP/YjgQ family [Neisseria polysaccharea ATCC 43768] gi|296837908|gb|EFH21846.1| permease, YjgP/YjgQ family [Neisseria polysaccharea ATCC 43768] Length = 371 Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 45/223 (20%), Positives = 107/223 (47%), Gaps = 11/223 (4%) Query: 15 SFLMSCLFIVFIAWVIQILQRINLVSSSTE---SLNILLKISGYLIPTVLPMVTPFCFAM 71 SF +F+V +A V+ Q INL+ + + +++ +L + G+ + + P++ + Sbjct: 12 SFTAVGIFVVLLA-VLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTPLLLVLTAFI 70 Query: 72 ETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP----KCRS 127 T VLT R++E+ + + G + I+PV+ A+ ++ + + + + P + R Sbjct: 71 STLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWVIPWAELRSRE 130 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 + L K +L+L + E N + + +Y + + ++ +F+ + I Sbjct: 131 YAEILKQKQELSLVEAG-EFNSLGKRNGRVYFVETFNTESGIMKNLFLREQDKNGNDNII 189 Query: 188 YAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 +A+ G+ L +++ + L+DG + +P D + + F+ +L Sbjct: 190 FAKEGNFSLNDNKRTLDLHDGYRYSGTPGKADYNRVSFQHLSL 232 >gi|116747639|ref|YP_844326.1| permease YjgP/YjgQ family protein [Syntrophobacter fumaroxidans MPOB] gi|116696703|gb|ABK15891.1| permease YjgP/YjgQ family protein [Syntrophobacter fumaroxidans MPOB] Length = 423 Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 78/362 (21%), Positives = 150/362 (41%), Gaps = 44/362 (12%) Query: 20 CLFIVFIAWVI-QILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLT 78 CL V + + ++ Q + ++ +S+ +L L+ + +P ++ P + Sbjct: 52 CLMGVSLVLITGRLFQLLKVLFTSSFTLGDLMALVALAMPKLMLFALPMASLLGVLLAFV 111 Query: 79 SMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE-NIIEPKCRSTIKQLSAKAQ 137 +N + EL+ + G V+ L + +++ F++ +I P ++ +L + A+ Sbjct: 112 RLNSDNELIALRAAGIGFHQFFPAVVSLLLGVTLISFVNMIFVIPPTGKAFEVKLRSMAR 171 Query: 138 LALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSRDTQTHKIYYAQSGSIDL 196 L ++E F L NP +++GIF+ D R+ + A+S I Sbjct: 172 SGLPV-LMKEGTFITAIPKLTFFFQSVNPTELSVRGIFVQDRREEKVRLAIVAESARIVY 230 Query: 197 DRQAIILN----DGEVHRKSPISKDISIMKFKSY--TLQTESANSSTIVLKANDQNLSFL 250 R + L +G + R + K+ + FK+Y +L + S K N + ++ Sbjct: 231 QRDSNHLTFKIANGSITRVADDMKNAQAVSFKAYDLSLSLDELIGSARGSKMNKREMTL- 289 Query: 251 LNPNPNNPNYRPELLET----YRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 YR + +T + EFH+RL FP L+ ++ A A+ RQR +I Sbjct: 290 ------RELYRVIVEKTGDVGHALEFHQRLA---FPSGCLLLGLIGAPLGAVFRQRGRIA 340 Query: 307 PIFISLSI--------SFGVFWGFSYIIHKIEQNPYYIPILYLF---LFCISSIFLLMIK 355 I I L + S G G ++++H P L + L CI++ F L K Sbjct: 341 GITIGLVVFLAYYVILSAGKGLGENHLVH---------PFLACWAPNLLCIAASFYLWRK 391 Query: 356 KK 357 + Sbjct: 392 MR 393 >gi|301060831|ref|ZP_07201645.1| permease, YjgP/YjgQ family [delta proteobacterium NaphS2] gi|300445080|gb|EFK09031.1| permease, YjgP/YjgQ family [delta proteobacterium NaphS2] Length = 383 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 72/370 (19%), Positives = 151/370 (40%), Gaps = 29/370 (7%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 YI R I +FL S +FI ++L L+ + L+ + + +LIP +L P Sbjct: 6 YIFREIWPTFLASLFVFIFIMMAARMLSITELIVTRGVHLSQVAGMVLFLIPDILTFALP 65 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 M ++ ++E++ + ++G S ++ PV+F ++ + P Sbjct: 66 AVTLMSVVVAFLRLSADSEIIAMKSSGISLYQMLPPVIFFSLAACLACVAISTFAAPWGN 125 Query: 127 STIKQL-----SAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSRD 180 + K L KA L ++E +F ++L ++ ++ L+ +F+VD RD Sbjct: 126 RSFKDLLFKIAETKADLG-----IKERIFCEPFENLVFYVNSFSREERMLKDVFVVDRRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA-----IILNDGEVHRKSPISKDISIMKFKSYT----LQTE 231 + + I + R A ++ G + + +KF +Y L+ Sbjct: 181 QEMTNTIVSDEAQI-IPRPAERTITLLFLKGTIFMVEKNFEGSRTIKFNTYALNIGLKDV 239 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 A+ ++ ++ +++ L++ + PN E Y + L + P+ + I+ Sbjct: 240 LADLASRKKAPHELSVNQLISKLKSTPNTDKE----YSRIMRELLEKLSIPLAVFFMGII 295 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF---LFCISS 348 A +R R + + +SL + F +++ F II I P ++ LF I S Sbjct: 296 GVPLGAQIRGRGRSAGVGVSL-VVFALYYLFLMIIRSIASTGALSPAFAVWIPDLFLIVS 354 Query: 349 IFLLMIKKKY 358 + L+ + + Sbjct: 355 VVYLLRRASH 364 >gi|78222462|ref|YP_384209.1| permease YjgP/YjgQ [Geobacter metallireducens GS-15] gi|78193717|gb|ABB31484.1| permease YjgP/YjgQ [Geobacter metallireducens GS-15] Length = 359 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 38/146 (26%), Positives = 73/146 (50%), Gaps = 7/146 (4%) Query: 55 YLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFL 114 Y IP + V P M T L ++RN+E++ + + G S + P+L +A S+F+ Sbjct: 55 YKIPEIATQVIPLAVLMATLLTLGMLSRNSEIIAMRSCGVSLRKISAPILAIACAASLFV 114 Query: 115 FISENIIEPKCRST---IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TL 170 +S +I PK S I+++ + + + TF L +N + D+ + ++P++ TL Sbjct: 115 IVSNELILPKTYSQMRFIEEVLIRKKSSNTF--LRQNNIWHKDNKAILMARAFDPDHQTL 172 Query: 171 QGIFIVDSRDTQT-HKIYYAQSGSID 195 +G+ + + T + A+ GS D Sbjct: 173 RGVTLWSFSEGMTPSRRIDAEQGSWD 198 >gi|134296646|ref|YP_001120381.1| permease YjgP/YjgQ family protein [Burkholderia vietnamiensis G4] gi|134139803|gb|ABO55546.1| permease YjgP/YjgQ family protein [Burkholderia vietnamiensis G4] Length = 363 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 53/218 (24%), Positives = 98/218 (44%), Gaps = 18/218 (8%) Query: 48 ILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLA 107 I L + GYL V+ +VT F + VLT R++E+++ +G S LIKP+ A Sbjct: 52 IGLTVIGYL--AVMLVVTLFVSILF---VLTRWYRDSEMVVWLASGVSLTRLIKPIGVFA 106 Query: 108 ----ILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIK-IS 162 +L++ F F+ P K + A+ Q S L F + + I Sbjct: 107 TPIILLIAFFAFVGW----PWSNQQSKMIKARFQQRDEISLLAPGQFRESASNHRVFFIE 162 Query: 163 KYNPNNT-LQGIFIVDSRDTQTHKI--YYAQSGSIDLDRQAIILNDGEVHRKSPISKDIS 219 K +P+ + +Q +F+ + + + + + + + + D DR ++L DG + +P + Sbjct: 163 KMSPDQSKVQNVFVTSTENGKVNVVVSHAGHTETRDGDR-FVVLEDGRRYDGTPGQPNFK 221 Query: 220 IMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNN 257 IM+F+ Y ++ S + + + L NP NN Sbjct: 222 IMEFQRYGVKITSTPVTNVPTTNSTPTPELLSNPTRNN 259 >gi|86609743|ref|YP_478505.1| YjgP/YjgQ permease [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558285|gb|ABD03242.1| putative permease, YjgP/YjgQ family [Synechococcus sp. JA-2-3B'a(2-13)] Length = 362 Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 34/137 (24%), Positives = 60/137 (43%), Gaps = 6/137 (4%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 +P +L + P T L M ++E+ + G + PVL + +L+S + Sbjct: 54 LPAILVVTFPIAGLFTTLLTLGKMGADSEITALRAAGIPYRKVFIPVLCIGLLISGLALL 113 Query: 117 SENIIEPKCRSTIKQLSAK---AQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI 173 + +I P+ +K L+ AQ AL F+ E R+DDDL+ + +P L Sbjct: 114 TNEVIVPETNQKVKILNKNLILAQDALLFNPEE---IVRVDDDLWFHVGSIDPKTGLMQD 170 Query: 174 FIVDSRDTQTHKIYYAQ 190 ++ R +T + Y Q Sbjct: 171 LLILDRKAETGHLRYPQ 187 >gi|299530038|ref|ZP_07043465.1| permease YjgP/YjgQ [Comamonas testosteroni S44] gi|298722018|gb|EFI62948.1| permease YjgP/YjgQ [Comamonas testosteroni S44] Length = 369 Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 47/241 (19%), Positives = 103/241 (42%), Gaps = 9/241 (3%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 F+ I + + RSF + + ++ + + +++ + + S + ++ + G+ + LP Sbjct: 3 FDSSIRKELARSFGATAVVLITVVMTMMLIRTLGQAYKGSVSPSDVMLVMGFTVLGQLPT 62 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLA---ILLSIFLFISENI 120 + + L+ M R++E++I G +L+KP+L A IL++ L + Sbjct: 63 ILGLSLFVAIVGSLSRMYRDSEMVIWFAAGQGLASLLKPLLRFAWPVILITAVLALG--- 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYNPNNTLQGIFIVDSR 179 + P I+Q+ + Q + F + + K +P++ V SR Sbjct: 120 VLPWSYQQIEQIKTQFQQRSDLDRIAPGEFQESAGGTRVFFVDKDSPSDMAASNVFVVSR 179 Query: 180 DTQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 D + A+ + + ++ +IL DG+ + I +FK Y +Q ++ N T Sbjct: 180 DPGKESVTSAKGAHLAVIKGQRMVILEDGQRMETRSDDGSVRITEFKEYGVQVDNDNPVT 239 Query: 238 I 238 I Sbjct: 240 I 240 >gi|119383653|ref|YP_914709.1| permease YjgP/YjgQ family protein [Paracoccus denitrificans PD1222] gi|119373420|gb|ABL69013.1| permease YjgP/YjgQ family protein [Paracoccus denitrificans PD1222] Length = 382 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 59/289 (20%), Positives = 123/289 (42%), Gaps = 16/289 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YIL F L +V + W+ + + + S ++ ++L+ + +P V Sbjct: 1 MPRIDRYILSQFMTLFGFFALVLVSVYWINRAVSLFEQLISDGQTALVVLEFTALTLPLV 60 Query: 61 LPMVTP---FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 + +V P F + TN L+S +EL+ + TG S + +PVL +L+++ + + Sbjct: 61 ISVVLPIAAFAASAYGTNRLSS---ESELVAMQATGMSPWRMARPVLVFGVLVALMVALL 117 Query: 118 ENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD 177 + + P R + A+ +T +L F + + I + L F+ D Sbjct: 118 VHAVVPMARGRLADRQAEIAQNVTAQFLRAGAFQYPVRGVTLYIRDIAADGRLVDFFLED 177 Query: 178 SRDTQTHKIYYAQSGSIDLDRQA--IILNDGEVH--RKSPISKDISIMKFK--SYTLQT- 230 +R+ + Y + + + +++ G V R + + +S+ +F +Y L T Sbjct: 178 ARNPDSQTTYTSTEALLVRTDEGPRLVMMQGMVQNLRHAGNRQSLSVTRFSELAYDLGTL 237 Query: 231 -ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQ 278 ++ S L+A + LL+P+P + +E H+RL + Sbjct: 238 IDTGESRKRDLRA--YSTLRLLDPDPELLAATGATRDRALAEAHERLAK 284 >gi|71083418|ref|YP_266137.1| permease YjgP/YjgQ family protein [Candidatus Pelagibacter ubique HTCC1062] gi|71062531|gb|AAZ21534.1| Predicted permease YjgP/YjgQ family protein [Candidatus Pelagibacter ubique HTCC1062] Length = 378 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 45/230 (19%), Positives = 89/230 (38%) Query: 16 FLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTN 75 FL+ I I WV+Q + ++ V + K + P ++ + PF + + Sbjct: 17 FLLVVFTISIIIWVLQAVNYLDFVIEDGHGFLVYFKYTLLSFPKIISRIFPFAIFLAFSY 76 Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAK 135 +L EL+I N G +I I + ++ + + +I P + + Sbjct: 77 ILLKYENKNELVIFWNFGIKKINFINFFIKFSLWFVLISLLLNAVITPFAQDKARSFIRS 136 Query: 136 AQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSID 195 + L S L+ F + +L I + N L IF+ + D + +A++ ++ Sbjct: 137 SNLDFFESVLKPKKFIDIIGNLTIYFDEKNKKGELINIFLNEKTDINNSQTTFAKTAIVN 196 Query: 196 LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQ 245 +D IL + + I+ IS +F NS+TI + + Sbjct: 197 IDNNKKILTLYDGKSINVINGKISEFEFSKTDYNISKFNSNTITYQKTQE 246 >gi|228470134|ref|ZP_04055043.1| permease, YjgP/YjgQ family [Porphyromonas uenonis 60-3] gi|228308272|gb|EEK17127.1| permease, YjgP/YjgQ family [Porphyromonas uenonis 60-3] Length = 683 Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 9/197 (4%) Query: 14 RSFLMSCLFIVFIAWVIQILQ----RINLVSSSTESLNILLKISGYLIPTVLPMVTPFCF 69 RSFL L + I W + ++Q I+ + + +LL++ Y VLP P Sbjct: 19 RSFLPLLLMTILICWFVVLMQFLWQHIDDLVGKGMDVGVLLEVIFYAGLYVLPTAVPLGV 78 Query: 70 AMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFL--AILLSIFLFISENIIEPKCRS 127 + + ++ ELL + + G ++KP++ L I L +F+++ + + R Sbjct: 79 LLASLMTFGNLGERLELLAMKSAGVPLSKIMKPLVILVTCIALGLFVYLDRGVQKASVR- 137 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSRDTQTHKI 186 + Q+ A+ A L + +FF D I + + +TL + I D + + +I Sbjct: 138 -VYQILFSARYARPELELPKGIFFNGIDGYSIYVGDKDVATSTLYNVMIYDLSEQRAPRI 196 Query: 187 YYAQSGSIDLDRQAIIL 203 A +G + +D + L Sbjct: 197 ILADTGRLLMDDSKLYL 213 >gi|300023218|ref|YP_003755829.1| permease YjgP/YjgQ family protein [Hyphomicrobium denitrificans ATCC 51888] gi|299525039|gb|ADJ23508.1| permease YjgP/YjgQ family protein [Hyphomicrobium denitrificans ATCC 51888] Length = 364 Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 59/243 (24%), Positives = 102/243 (41%), Gaps = 39/243 (16%) Query: 10 RCIGRSFLMS-------CLFIVFIAWVIQILQ---RINLVSSSTESLNILLKISGYLIPT 59 R I R F+++ C ++F+ +++L+ + V +T LL+I+ +P Sbjct: 9 RYIARMFIVAIVTTLTVCALLIFMIDFVELLRMAGKYGAVPGTT-----LLRIALLRLPA 63 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + + F + + + L +NR +EL ++ G S + P LF+ + + IF N Sbjct: 64 YIEFLIGFAVLVGSISALIYLNRKSELAVMRAGGMSVWQFLGPGLFVGLAVGIFAMAVFN 123 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIK------------ISKYNPN 167 + + R+T ++L AKA F E NL +I+ + N Sbjct: 124 PLASRGRATSEKLYAKA-----FGN-EANLLRAQGGGSWIRQNGADGESVLGAAAASNQG 177 Query: 168 NTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 TL G+ +V + D + H +GS +L L D V R + KFKSY Sbjct: 178 LTLTGV-LVFAYDREGHFSERIDAGSAELKDGYWELQDAWVTRLGQEPE-----KFKSYL 231 Query: 228 LQT 230 L T Sbjct: 232 LST 234 >gi|238921310|ref|YP_002934825.1| hypothetical protein NT01EI_3454 [Edwardsiella ictaluri 93-146] gi|238870879|gb|ACR70590.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 366 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 49/240 (20%), Positives = 96/240 (40%), Gaps = 23/240 (9%) Query: 47 NILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFL 106 N++ + G IP + ++ P + L + +E+ ++ G S+ L+K + L Sbjct: 46 NLVFSLLGLGIPEMAQLILPLSLFLGLLMTLGRLYTESEITVMHACGLSKAVLVKAAMVL 105 Query: 107 AILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP 166 A + ++ + P ++ A+A+ + L E F D Y+ Sbjct: 106 AFITGALALVNAFWLSPWSSLHSDEVMAEARANPGLASLAEGQFQSSQDGNYVLFVGNVK 165 Query: 167 NNTLQGIFIVDSRDTQTHK--IYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIM 221 + Q +F+ R + + + + A SG + Q ++L+ G + + + +D I Sbjct: 166 DKKFQNVFLAQLRPSGSQRPSVVVADSGHLVEMKDGAQKVVLDSGTRYEGTAMLRDFRIT 225 Query: 222 KFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLET----YRSEFHKRLT 277 F Y S+ I K S +L+PN + L + +R+EFH RLT Sbjct: 226 DFVDY--------SAIIGHK------SAMLDPNNADQASMEALWHSQEPSFRAEFHWRLT 271 >gi|261401002|ref|ZP_05987127.1| permease, YjgP/YjgQ family [Neisseria lactamica ATCC 23970] gi|269209119|gb|EEZ75574.1| permease, YjgP/YjgQ family [Neisseria lactamica ATCC 23970] Length = 371 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 45/223 (20%), Positives = 105/223 (47%), Gaps = 11/223 (4%) Query: 15 SFLMSCLFIVFIAWVIQILQRINLVSSSTE---SLNILLKISGYLIPTVLPMVTPFCFAM 71 SF +F+V +A V+ Q INL+ + + +++ +L + G+ I + P++ + Sbjct: 12 SFTAVGIFVVLLA-VLVSTQAINLLGRAADGRVAIDAVLALVGFWIIGMTPLLLVLTAFI 70 Query: 72 ETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP----KCRS 127 T VLT R++E+ + + G + I+PV+ A+ ++ + + + + P + R Sbjct: 71 STLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWVMPWAELRSRE 130 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 + L K +L+L + N + + +Y + + ++ +F+ + I Sbjct: 131 YAEILKQKQELSLVEAG-RFNTLGKRNGRVYFVETFDTESGIMKNLFLREQDKNGNDNII 189 Query: 188 YAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 +A+ G+ L +++ + L DG + +P D + + F+ +L Sbjct: 190 FAKEGNFSLNDNKRTLELRDGYRYSGTPGKADYNRVSFRHLSL 232 >gi|325295268|ref|YP_004281782.1| permease YjgP/YjgQ family protein [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065716|gb|ADY73723.1| permease YjgP/YjgQ family protein [Desulfurobacterium thermolithotrophum DSM 11699] Length = 361 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 60/251 (23%), Positives = 101/251 (40%), Gaps = 35/251 (13%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 IP L M P F + V + N EL+ + + G S L KPV+FL + SI F Sbjct: 59 IPAFLGMTIPMAFILSVLIVFIQLGNNNELVALKSCGVSTKELSKPVIFLGVAFSILSFY 118 Query: 117 SENIIEPKCRSTI-KQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI 175 S + PK + K++ + +T S +N F + + K P F+ Sbjct: 119 SLMFLMPKSNVAMKKEIEELVKKKITMSISPKN-FSSNFPGVTFYVEKLYPEKGYLENFM 177 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILN--DGE---VHRKSPISKDISIMKFKSYTLQ- 229 V +A+ G + ++ + L+ DG ++ K P ++ ++ FK+YT++ Sbjct: 178 VSLVKKDELITIFAKKGMLRTEKDTVFLDIQDGTGEFINWKKP--ENFKVLNFKNYTVKL 235 Query: 230 ---TESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYR----SEFHKRLTQWLFP 282 T+ +I K PEL+ + R E KRL L P Sbjct: 236 YRFTKREKFESIRYKT------------------LPELISSNRIEAKVELFKRLGLSLAP 277 Query: 283 VIFGLISIVAA 293 +I G+++ A Sbjct: 278 LIVGILAFSLA 288 >gi|297517382|ref|ZP_06935768.1| hypothetical protein EcolOP_07050 [Escherichia coli OP50] Length = 340 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 67/265 (25%), Positives = 109/265 (41%), Gaps = 27/265 (10%) Query: 22 FIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMN 81 F++FI + + ++ T +L+++L I Y + L M+ P + L M Sbjct: 6 FLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIALEMLLPVGLYVSVGVTLGQMY 65 Query: 82 RNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALT 141 ++E+ I G S L K VL+LAI LSIF+ + P + I QL ++Q L Sbjct: 66 TDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMYGRPWAYAQIYQLEQQSQSELD 125 Query: 142 FSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQA 200 L F D+ I + NN L I S +T +I+ A+ S+D Sbjct: 126 VRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTSTANRT-RIFRAR--SVD----- 177 Query: 201 IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNY 260 V SP + + +Y + + + + + + NL LNP +PN Sbjct: 178 -------VVDPSPEKPTVMLHNGTAYLIDHQGRDDNEQIYR----NLQLHLNPLDQSPNV 226 Query: 261 RPE---LLETYRSEF---HKRLTQW 279 + + + E RS F H L QW Sbjct: 227 KRKAKSVTELARSVFPADHAEL-QW 250 >gi|325279047|ref|YP_004251589.1| permease YjgP/YjgQ family protein [Odoribacter splanchnicus DSM 20712] gi|324310856|gb|ADY31409.1| permease YjgP/YjgQ family protein [Odoribacter splanchnicus DSM 20712] Length = 487 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/124 (25%), Positives = 61/124 (49%), Gaps = 2/124 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQR-INLVSSSTESLNILLKISGYLIPT 59 MK +++L+ F+ + FI ++Q L R I+ + ++ ++ Y+ T Sbjct: 1 MKKLHIFMLKSFIGPFV-ATFFISMFVLIMQFLWRMIDEIVGKGLEFTVIAELLIYVATT 59 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++PM P + + S+ N EL+ + + G S ++KP++ L I L++F F+ N Sbjct: 60 LVPMALPLAVLLSSIMTFGSLGENYELIALKSAGISLYRIMKPLIILIICLTVFAFVFSN 119 Query: 120 IIEP 123 I P Sbjct: 120 NILP 123 >gi|220906932|ref|YP_002482243.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 7425] gi|219863543|gb|ACL43882.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 7425] Length = 374 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 56/236 (23%), Positives = 94/236 (39%), Gaps = 19/236 (8%) Query: 7 YILRCIGRSFLMS-CLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 YIL + FL +F + A + + + ++ + +L + L+I G +P + + Sbjct: 13 YILAEMAMPFLFGVAVFTLLAATIGVVFDLLRWLADNRLTLAVALQILGLRLPEFIILAL 72 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + V ++ R +EL+ + G S L P+L + LL+ F I P+ Sbjct: 73 PMSMLLTPLLVFNTLGRRSELVALQGCGVSVYRLALPILLVGFLLAGLTFGLNETIAPQT 132 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV---DSRDTQ 182 Q+ A + E+N+F+R D NTL IF D + Q Sbjct: 133 NYQALQIQTAALRRPQQKFREKNIFYREFVD-----------NTLSRIFYARQFDGQQMQ 181 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 I G +D Q I+ N E +K D S T TES++ ++I Sbjct: 182 RITILNFDQGKLD---QIIVANAAEWDQKQK-HWDFQQGTVYSLTPNTESSSYTSI 233 >gi|167626385|ref|YP_001676885.1| hypothetical protein Fphi_0163 [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|241668816|ref|ZP_04756394.1| hypothetical protein FphipA2_08610 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254877348|ref|ZP_05250058.1| permease [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|167596386|gb|ABZ86384.1| conserved membrane protein of unknown function [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|254843369|gb|EET21783.1| permease [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 352 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 47/200 (23%), Positives = 93/200 (46%), Gaps = 13/200 (6%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNI-LLKISGYLIPTVLPMVT 65 YI + + SFL+ L + ++ L +++ ++ T + NI L+ I+ Y +P +L + Sbjct: 9 YIFKTVFSSFLIVSLIFCILFFIFTYLAQVS--NNDTGASNIELIIITIYQLPGILYTLL 66 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P C + L+ + N+E++++ + G S + K V+ + I+ SI + I P Sbjct: 67 PACAMVGALMGLSLLANNSEIIVLRSFGRSTAQIAKGVVLVGIIGSIVTMVFGGYIAPVL 126 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSRDTQTH 184 + K + T +Y +L+ + D ++ IS +PN GI ++D Q Sbjct: 127 Q--------KLADSNTVAYNTHDLWLKTPDG-FMNISNIDPNEGKAYGIRKFITKDNQVQ 177 Query: 185 KIYYAQSGSIDLDRQAIILN 204 ++ YA+ D A + N Sbjct: 178 EVRYAEKAEYVNDATANVFN 197 >gi|206901914|ref|YP_002251684.1| putative permease, YjgP/YjgQ family [Dictyoglomus thermophilum H-6-12] gi|206741017|gb|ACI20075.1| putative permease, YjgP/YjgQ family [Dictyoglomus thermophilum H-6-12] Length = 362 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 50/232 (21%), Positives = 98/232 (42%), Gaps = 6/232 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRI-NLVSSSTESLNILLKISGYLIPT 59 +K++ YI I F + + + +IQIL + + S +LK+ Y IP+ Sbjct: 3 IKTYHKYIFSEILGPFFLGIFGFILVM-LIQILYEFSDFIIMRRVSFETVLKLLYYKIPS 61 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITL-IKPVLFLAILLSIFLFISE 118 + V P + R+ E+ + ++G TL + P+LF L + F + Sbjct: 62 LFVFVIPVSLLFAIIFSFGRLMRDGEIFAMRSSGIYFFTLALAPLLFSVFLSFVLWFFTY 121 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISK-YNPNNTLQGIFIVD 177 ++I P+ +L K EN+FF ++ Y + K N +Q + + D Sbjct: 122 SLI-PESNYRSNRLIQKYFFLNPAPVKGENIFFHDEEGRYYYVKKIIEDKNIMQNVLVFD 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ 229 + + + I Y ++ +R +++L +G VH + I KF+ + + Sbjct: 181 TSSSNKYPIIYTAEEAV-WNRDSLVLKNGVVHHLGDDAFVIWEGKFEEFKIN 231 >gi|225075102|ref|ZP_03718301.1| hypothetical protein NEIFLAOT_00101 [Neisseria flavescens NRL30031/H210] gi|224953586|gb|EEG34795.1| hypothetical protein NEIFLAOT_00101 [Neisseria flavescens NRL30031/H210] Length = 373 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 45/223 (20%), Positives = 107/223 (47%), Gaps = 11/223 (4%) Query: 15 SFLMSCLFIVFIAWVIQILQRINLVSSSTE---SLNILLKISGYLIPTVLPMVTPFCFAM 71 SF +F+V +A V+ Q INL+ + + +++ +L + G+ + + P++ + Sbjct: 12 SFTAVGIFVVLLA-VLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTPLLLVLTAFI 70 Query: 72 ETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP----KCRS 127 T VLT R++E+ + + G + I+PV+ A+ +I + + + + P + R Sbjct: 71 STLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAILIAVMQLWVMPWAELRSRE 130 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 + L K +L+L + E N + + +Y + + ++ +F+ + I Sbjct: 131 YAEILKQKQELSLVEAG-EFNSLGKRNGRVYFVETFDTESGIMKNLFLREQDKNGNDNII 189 Query: 188 YAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 +A+ G+ L +++ + L +G + +P D + + F++ +L Sbjct: 190 FAKEGNFSLNDNKRTLDLRNGYRYSGTPGRADYNRVSFQNLSL 232 >gi|51474040|ref|YP_067797.1| hypothetical protein RT0862 [Rickettsia typhi str. Wilmington] gi|51460352|gb|AAU04315.1| conserved hypothetical protein (possible transmembrane protein) [Rickettsia typhi str. Wilmington] Length = 360 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 44/176 (25%), Positives = 88/176 (50%), Gaps = 8/176 (4%) Query: 85 ELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSY 144 +L+I+ +G + I L P L++A+ + +F + + I P +K + + S Sbjct: 84 QLIILQASGVNNIQLALPALYVALTVMLFAYYISSTILPLSHINLKSRLSFIKNNYISSM 143 Query: 145 LEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAII-- 202 +EE F ++ ++ + I K N + GI I D+R+ I +A SG++++ I Sbjct: 144 IEEKTFNKITKNITVFIDKKLAGNIMNGIIIFDNRNADKPSIVFAGSGTLNIHGNNPIFE 203 Query: 203 LNDGEVHRKSPISKDISIMKFKSYT--LQTESANSSTIVL---KANDQNLSFLLNP 253 LN G + ++ ++ +++ + F S LQ +S+ +S +AN+ +S LL P Sbjct: 204 LNKG-LRQEYDVNGNLTQLTFDSLMIKLQNDSSLASQRTQHNKEANEYYISELLTP 258 >gi|116624897|ref|YP_827053.1| permease YjgP/YjgQ family protein [Candidatus Solibacter usitatus Ellin6076] gi|116228059|gb|ABJ86768.1| permease YjgP/YjgQ family protein [Candidatus Solibacter usitatus Ellin6076] Length = 777 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 92/380 (24%), Positives = 153/380 (40%), Gaps = 44/380 (11%) Query: 1 MKSFELYILRCIGRSFLMSCL---FIVFIAWVIQILQRINLVSSSTESLNILLKISGYLI 57 M+ YI R I S ++ L FI+F+ V I + LV SS+ + N++L++ I Sbjct: 1 MRLLGRYIFREILTSAVLGTLLASFILFLRSVDPIFEL--LVKSSSANTNLVLQLFALAI 58 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 P VLP PF + L + + E++ + G S +I PVL A L + Sbjct: 59 PNVLPFTIPFGVLVGILIGLGRLASDGEIIAMRAAGVSSRKVIFPVLLFAALGGGVAAFA 118 Query: 118 ENIIEP----KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN--TLQ 171 + P K + QL A QL + + +F + + + + P N + Sbjct: 119 TLRLTPYSIHKYTDIVNQLEA-TQLT---ADVPSRVFVENFPNTILYVGEVKPGNPSVWK 174 Query: 172 GIFIVDSRDTQTHKIYY---AQSGSIDLDRQAIILNDGEVHR---------KSPISKDIS 219 +F+ D + A I + QAI + D +R +SKD+S Sbjct: 175 NVFVADVAPPEKRSAGMRDKAMGPMITVAEQAIAVPDVTNNRLQLTLRNYSTHEMSKDLS 234 Query: 220 IMKFKSYTLQ---TESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRL 276 + T Q T S S T L++ LL P +P+ +E Y+ E HKR Sbjct: 235 SRDTIAPTGQQALTASPPSQT-PLRSIGMGTRQLL----AYPRGKPDWVE-YQIELHKRF 288 Query: 277 TQWLFPVIFGLISI-VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY 335 + ++ ++ I + R R ++ IF++ F + GF +I Q Sbjct: 289 ALPVACIMLAMVGIPLGIATRKGGRSAGYVNAIFVAF---FCYYMGFVSLIGLARQKTLP 345 Query: 336 IPI-LYL---FLFCISSIFL 351 +P+ L+L F + IFL Sbjct: 346 VPVALWLPNAVFFVVGVIFL 365 >gi|238023199|ref|ZP_04603625.1| hypothetical protein GCWU000324_03126 [Kingella oralis ATCC 51147] gi|237865582|gb|EEP66722.1| hypothetical protein GCWU000324_03126 [Kingella oralis ATCC 51147] Length = 368 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 56/261 (21%), Positives = 115/261 (44%), Gaps = 24/261 (9%) Query: 20 CLFIVFIAWVIQILQRINLVSSSTE---SLNILLKISGYLIPTVLPMVTPFCFAMETTNV 76 +F V +A ++ Q IN++ + + +++ + + G+ + P++ + T V Sbjct: 17 AIFFVVLA-ILVFTQGINMLGRAADGRVAVDAVTTLIGFWTLGMTPLLLVLTAYISTLTV 75 Query: 77 LTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP----KCRSTIKQL 132 LT R++E+ I ++G I+PVL A+ L++ + + + P + R + L Sbjct: 76 LTRYWRDSEMAIWLSSGLGLKKWIRPVLTFALPLAVLVATMQISVLPWAEYRSREYAEIL 135 Query: 133 SAKAQLAL----TFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYY 188 K L+L TFS L + D +Y + N ++ +FI D +T + + Sbjct: 136 KQKQNLSLVQAGTFSELGKK-----DGRVYFVETFDTDNGIMKNLFIRDIDETGRDSVVF 190 Query: 189 AQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 A+ G DL +++ ++L +G + D + F+ L N++ V+ D Sbjct: 191 AKEGRFDLSNNKRTLVLTNGYRYSGIAGRGDFDQVSFQELNLII---NTTPKVVDPIDHR 247 Query: 247 LSFLLNP--NPNNPNYRPELL 265 + +NP Y+ EL+ Sbjct: 248 RTIPTAQLIGSSNPQYQAELM 268 >gi|196228189|ref|ZP_03127056.1| permease YjgP/YjgQ family protein [Chthoniobacter flavus Ellin428] gi|196227592|gb|EDY22095.1| permease YjgP/YjgQ family protein [Chthoniobacter flavus Ellin428] Length = 380 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 51/216 (23%), Positives = 88/216 (40%), Gaps = 9/216 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+LR FLM + I +I + N + +L+ +PTV Sbjct: 1 MNILDRYVLRSFIEPFLMCLAGFIAIWLIIDVSDNFNDFIEAHARFRTILEYYVTQLPTV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + L+ M+R EL+ G S + ++ P++ + +L++ F F Sbjct: 61 ILMSLPVGLMLGLLFSLSRMSRTNELISQLTAGRSVVRVLAPLIGVGVLMTGFCFWLNWE 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLE---ENLFFRLDDD--LYIKISKYNPNNT-LQGIF 174 P S K K + + +E +LF DD Y++ + P +QG+ Sbjct: 121 HAPHAESIKKDAMQKIKRGKRATDVEPVLAHLFRDRRDDRTWYVRKLIFQPGEERMQGVH 180 Query: 175 IVDSRDTQTH--KIYYAQSGSIDLDRQAIILNDGEV 208 V +D H K +YA S D +Q L G++ Sbjct: 181 -VTQQDETGHILKKWYASSVYYDPAKQEWKLEKGKI 215 >gi|88803032|ref|ZP_01118559.1| putative permease [Polaribacter irgensii 23-P] gi|88781890|gb|EAR13068.1| putative permease [Polaribacter irgensii 23-P] Length = 482 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 2/124 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQIL-QRINLVSSSTESLNILLKISGYLIPT 59 MK + YIL+ FL + L ++F+ V+Q+L Q ++ S + +LK Y + Sbjct: 1 MKILDKYILKTFLGPFLATFLIVLFV-LVMQLLWQTFENIAGKGISFSFILKFLYYTSLS 59 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++P P + + L S+ N E ++G S L++P++FL +LLS F+ N Sbjct: 60 IVPQAMPIAVLLSSIMALGSLGENYEFAAAKSSGISLQRLVRPLIFLTLLLSGINFLFLN 119 Query: 120 IIEP 123 I P Sbjct: 120 NIFP 123 >gi|296115281|ref|ZP_06833921.1| putative permease [Gluconacetobacter hansenii ATCC 23769] gi|295978184|gb|EFG84922.1| putative permease [Gluconacetobacter hansenii ATCC 23769] Length = 406 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 52/249 (20%), Positives = 111/249 (44%), Gaps = 15/249 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + + Y+L+ + F +S ++ + ++L NL++S+ S+ + + L+P L Sbjct: 12 TLDHYLLQQVTPPFSISLGVVMAALLLERLLALFNLLASNGSSMKTFVSLLTDLVPHYLG 71 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + +V+ M++N E+ + +G S + +P + + +L + F I+ Sbjct: 72 LALPAAMCVSVFSVIRRMSQNHEIDALMASGVSMFRIARPFIVVGAILGVLSFSLYGFIQ 131 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKY-NPNNTLQGIFIVDSRDT 181 P R + A + +L+ ++F DL + K + + + +FI D+ + Sbjct: 132 PYARYNYRSALYFASHSGWAPHLQSHMFAAPSHDLMLTAEKVDDAGSRMFKVFIRDNSNH 191 Query: 182 QTHKIYYAQSGSI----DLDRQAIILNDGEV----HRKSPISKDISIMKFKSYTLQTESA 233 + A+ G + D D+ + L DG + H KSP S++ F +T + S Sbjct: 192 DLTRYITARKGYLYIPNDEDKIRLDLIDGTIITDRHDKSP-----SVIHF-DHTTELFSP 245 Query: 234 NSSTIVLKA 242 ++ LKA Sbjct: 246 HAQLDKLKA 254 >gi|218440672|ref|YP_002379001.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 7424] gi|218173400|gb|ACK72133.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 7424] Length = 388 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 46/226 (20%), Positives = 96/226 (42%), Gaps = 20/226 (8%) Query: 39 VSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRIT 98 V+ S SL + L+I +P + + P + T + + ++EL+ + + G S Sbjct: 55 VTESGLSLTVALQILSLKMPEFIVLAFPMSILLATLMAYSRLASDSELIALRSIGLSPYR 114 Query: 99 LIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLY 158 L+ P + L+++++ F + + P+ KQ+ A A +++E+N+ + Y Sbjct: 115 LLVPSIILSLMVTGVTFFFSDYVAPQATQQAKQILADALKKDQPAFVEDNIIY----PEY 170 Query: 159 IKISKYNPNN----------------TLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAII 202 KI+ N + +QG+ I+D ++I +QS +LD + Sbjct: 171 RKITLENGRDQTVLTRLFYAEKFDGQQMQGLTILDRSQPGVNQIVTSQSAMWNLDSNSWD 230 Query: 203 LNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLS 248 +G ++ +P +I++F+ L A K N +S Sbjct: 231 FYNGTIYLIAPDGSYRNIVRFQHQKLDLPRAPLDIAKGKQNPAEMS 276 >gi|261364965|ref|ZP_05977848.1| permease, YjgP/YjgQ family [Neisseria mucosa ATCC 25996] gi|288566762|gb|EFC88322.1| permease, YjgP/YjgQ family [Neisseria mucosa ATCC 25996] Length = 371 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 44/223 (19%), Positives = 107/223 (47%), Gaps = 11/223 (4%) Query: 15 SFLMSCLFIVFIAWVIQILQRINLVSSSTE---SLNILLKISGYLIPTVLPMVTPFCFAM 71 SF +F+V +A V+ Q INL+ + + +++ +L + G+ + + P++ + Sbjct: 12 SFTAVGIFVVLLA-VLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTPLLLVLTAFI 70 Query: 72 ETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP----KCRS 127 T VLT R++E+ + + G + I+PV+ A+ +I + + + + P + R Sbjct: 71 STLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAILIAVMQLWVMPWAELRSRE 130 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 + L K +L++ + E N + + +Y + + ++ +F+ + I Sbjct: 131 YAEILKQKQELSMVEAG-EFNSLGKRNGRVYFVETFDTESGIMKNLFLREQDKNGNDNII 189 Query: 188 YAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 +A+ G+ L +++ + L +G + +P D + + F++ +L Sbjct: 190 FAKEGNFSLNDNKRTLDLRNGYRYSGTPGKADYNRVSFQNLSL 232 >gi|332535154|ref|ZP_08410963.1| hypothetical protein PH505_cf00160 [Pseudoalteromonas haloplanktis ANT/505] gi|332035424|gb|EGI71923.1| hypothetical protein PH505_cf00160 [Pseudoalteromonas haloplanktis ANT/505] Length = 354 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 36/175 (20%), Positives = 81/175 (46%), Gaps = 1/175 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ + Y+ R I ++ + L +V I+ +I+ + ++ V + L + + Y IP Sbjct: 1 MKTLDWYLGRSILQTTGFALLVLVGISTLIKFIDQLKSVGRGSYDLMTAMLYTLYTIPGD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L ++ N+EL+++ G SR+ +I V+ AI +++ + Sbjct: 61 LVVFFPMAALIGGLTGLGALASNSELVVMQAAGMSRLQIIGSVMKTAIFMAVCMMALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI 175 P+ + K++ +A ++ ++ + D +I I + N L G+ + Sbjct: 121 GAPEAQLHAKEMRNQAIHGGDVFNTQKGVWAK-DGSNFINIEDVDENGRLNGVHM 174 >gi|291327104|ref|ZP_06127004.2| inner membrane protein YjgP [Providencia rettgeri DSM 1131] gi|291311564|gb|EFE52017.1| inner membrane protein YjgP [Providencia rettgeri DSM 1131] Length = 343 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 43/199 (21%), Positives = 84/199 (42%), Gaps = 15/199 (7%) Query: 84 TELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFS 143 +E+ ++ G + L+K L LA++ ++ + + P +Q+ A A+ + Sbjct: 61 SEITVMHACGLGKSVLVKAALVLAVITAMVAVANITWMLPWSSQYQEQVLADAKANPGLA 120 Query: 144 YLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR--DTQTHKIYYAQSGSIDLD---R 198 + E F D Y+ + + +F+ R + Q + A SG + D R Sbjct: 121 AMVEGQFKTTKDGNYVLYIGDVKGSNFKNVFLAQLRAANEQRPSVVVADSGYMKEDPDGR 180 Query: 199 QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNP 258 Q ++LN+G + + + +D I F +Y + + T + +N+ L + N Sbjct: 181 QVVVLNEGTRYEGTALLRDFRITDFVNYQAIVDHQTAETRSDRVEQKNMLQLWSENT--- 237 Query: 259 NYRPELLETYRSEFHKRLT 277 PE+ +EFH RLT Sbjct: 238 ---PEV----NAEFHWRLT 249 >gi|206561015|ref|YP_002231780.1| putative permease [Burkholderia cenocepacia J2315] gi|198037057|emb|CAR52978.1| putative permease protein [Burkholderia cenocepacia J2315] Length = 364 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 51/219 (23%), Positives = 98/219 (44%), Gaps = 19/219 (8%) Query: 48 ILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLA 107 I L + GYL V+ +VT F + VLT R++E+++ +G S LIKP+ A Sbjct: 52 IGLTVIGYL--AVMLVVTLFVSIL---FVLTRWYRDSEMVVWLASGVSLTRLIKPIGVFA 106 Query: 108 ----ILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIK-IS 162 +L++ F F+ P K + A+ Q S L F + + I Sbjct: 107 APIILLITFFAFVGW----PWSNQQSKMIKARFQQRDEISLLAPGQFRESAANHRVFFIE 162 Query: 163 KYNPNNT-LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDI 218 K +P+ + +Q +F+ + + + + + +Q+G + + ++L DG + +P + Sbjct: 163 KMSPDQSKVQNVFVTSTENGKVN-VVVSQTGHTETSKDGDRFVVLEDGRRYDGTPGQPNF 221 Query: 219 SIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNN 257 IM+F+ Y ++ S + + + L NP +N Sbjct: 222 KIMEFERYGVKITSKPVTNVQTTNSTPTPDLLRNPTRDN 260 >gi|157363796|ref|YP_001470563.1| permease YjgP/YjgQ family protein [Thermotoga lettingae TMO] gi|157314400|gb|ABV33499.1| permease YjgP/YjgQ family protein [Thermotoga lettingae TMO] Length = 1102 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 46/219 (21%), Positives = 104/219 (47%), Gaps = 10/219 (4%) Query: 7 YILR-CIGRSFLMSCLFIVFIAWVIQILQRI-NLVSSSTESLNILLKISGYLIPTVLPMV 64 YI++ +G + F++F++ ++IL ++ +L+ + +LLK+ Y +P + + Sbjct: 7 YIIKLSVGPMLIGLAGFVIFVS--VEILYQLSDLIVRHRVGIFVLLKVLYYYLPYFVALG 64 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P + VL+ ++ + EL+ + G S LI P L L+I LS ++ + I P Sbjct: 65 IPVGILLSIFWVLSQLSTDHELMALQVHGISLKVLIVPFLILSIALSFVTYVLSDRIVPL 124 Query: 125 CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTH 184 + +K ++ EN+ ++D+ Y + KY+ N + ++ + Sbjct: 125 YNQKADSVISKYVYKRPEVFISENVLTKIDESQYFYVKKYDRQNGILEDVVLFRNEPSEE 184 Query: 185 KIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKF 223 +I A+ + ++ + DG+++R + KD +++F Sbjct: 185 EIITAK--KVVKEKNKWFMYDGKMYR---VDKD-GVLRF 217 >gi|264678996|ref|YP_003278903.1| permease YjgP/YjgQ [Comamonas testosteroni CNB-2] gi|262209509|gb|ACY33607.1| permease YjgP/YjgQ [Comamonas testosteroni CNB-2] Length = 369 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 46/241 (19%), Positives = 102/241 (42%), Gaps = 9/241 (3%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 F+ I + + RSF + + ++ + + +++ + + S + ++ + G+ + LP Sbjct: 3 FDSSIRKELARSFGATAVVLITVVMTMMLIRTLGQAYKGSVSPSDVMLVMGFTVLGQLPT 62 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLA---ILLSIFLFISENI 120 + + L+ M R++E++I G +L+KP+L A IL++ L + Sbjct: 63 ILGLSLFVAIVGSLSRMYRDSEMVIWFAAGQGLASLLKPLLRFAWPVILITAVLALG--- 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYNPNNTLQGIFIVDSR 179 + P I+Q+ + Q + F + + K +P++ V SR Sbjct: 120 VLPWSYQQIEQIKTQFQQRSDLDRIAPGEFQESAGGTRVFFVDKDSPSDMAASNVFVVSR 179 Query: 180 DTQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 D + A+ + + ++ +IL DG+ + I +FK Y +Q ++ N Sbjct: 180 DPGKESVTSAKGAHLAVIKGQRMVILEDGQRMETRSDDGSVRITEFKEYGVQVDNDNPVA 239 Query: 238 I 238 I Sbjct: 240 I 240 >gi|116690487|ref|YP_836110.1| permease YjgP/YjgQ family protein [Burkholderia cenocepacia HI2424] gi|170733808|ref|YP_001765755.1| permease YjgP/YjgQ family protein [Burkholderia cenocepacia MC0-3] gi|116648576|gb|ABK09217.1| permease YjgP/YjgQ family protein [Burkholderia cenocepacia HI2424] gi|169817050|gb|ACA91633.1| permease YjgP/YjgQ family protein [Burkholderia cenocepacia MC0-3] Length = 364 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 55/220 (25%), Positives = 100/220 (45%), Gaps = 21/220 (9%) Query: 48 ILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLA 107 I L + GYL V+ +VT F + VLT R++E+++ +G S LIKP+ A Sbjct: 52 IGLTVIGYL--AVMLVVTLFVSIL---FVLTRWYRDSEMVVWLASGVSLTRLIKPIGVFA 106 Query: 108 ----ILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIK-IS 162 +L++ F F+ P K + A+ Q S L F + + I Sbjct: 107 TPIILLITFFAFVGW----PWSNQQSKMIRARFQQRDEISLLAPGQFRESAANHRVFFIE 162 Query: 163 KYNPNNT-LQGIFIVDSRDTQTHKIYYAQSG----SIDLDRQAIILNDGEVHRKSPISKD 217 K +P+ + +Q +F+ + + + + + +Q+G S D DR ++L DG + +P + Sbjct: 163 KMSPDQSKVQNVFVTSTENGKVN-VVVSQTGHTETSKDGDR-FVVLEDGRRYDGTPGQPN 220 Query: 218 ISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNN 257 IM+F+ Y ++ S + + + L NP +N Sbjct: 221 FKIMEFERYGVKITSKPVTNVQTTNSTPTPDLLRNPTRDN 260 >gi|261377636|ref|ZP_05982209.1| permease, YjgP/YjgQ family [Neisseria cinerea ATCC 14685] gi|269146390|gb|EEZ72808.1| permease, YjgP/YjgQ family [Neisseria cinerea ATCC 14685] Length = 371 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 44/223 (19%), Positives = 107/223 (47%), Gaps = 11/223 (4%) Query: 15 SFLMSCLFIVFIAWVIQILQRINLVSSSTE---SLNILLKISGYLIPTVLPMVTPFCFAM 71 SF +F+V +A V+ Q INL+ + + +++ +L + G+ + + P++ + Sbjct: 12 SFTAVGIFVVLLA-VLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTPLLLVLTAFI 70 Query: 72 ETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP----KCRS 127 T VLT R++E+ + + G + I+PV+ A+ +I + + + + P + R Sbjct: 71 STLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAILIAVMQLWVMPWAELRSRE 130 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 + L K +L++ + E N + + +Y + + ++ +F+ + I Sbjct: 131 YAEILKQKQELSMVEAG-EFNSLGKRNGRVYFVETFDTESGIMKNLFLREQDKNGKDNII 189 Query: 188 YAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 +A+ G+ L +++ + L +G + +P D + + F++ +L Sbjct: 190 FAKEGNFSLNDNKRTLDLRNGYRYSGTPGKADYNRVSFQNLSL 232 >gi|24372947|ref|NP_716989.1| hypothetical protein SO_1369 [Shewanella oneidensis MR-1] gi|24347090|gb|AAN54434.1|AE015581_1 conserved hypothetical protein [Shewanella oneidensis MR-1] Length = 370 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 66/292 (22%), Positives = 120/292 (41%), Gaps = 31/292 (10%) Query: 80 MNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLA 139 M E++I+ G S + + L LA++ +F + P Q+ KAQ Sbjct: 79 MYAENEMVILHGVGVSEWYVTRVTLILAVINMLFTGYLSLYVAPWAEEQQNQVLEKAQSE 138 Query: 140 LTFSYLEENLFFRLDDDLYIK-ISKYNPNNTLQGIFIVDSRDTQTH----KIYYAQSGSI 194 + L + F + + + + +N L+ +F+ D + A+ G + Sbjct: 139 AGLAALVQGRFQASPNGRAVLFVERIGKDNELEKVFVAQLPDPNDEIGLTNVVVAKGGRV 198 Query: 195 DLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLL 251 D+ Q + LNDG ++ SP KD +++F Y +Q + K + L LL Sbjct: 199 IEDQNGSQQLQLNDGVRYQGSPQQKDYQMIEFGGYKMQIKEQQVDERRRKLSALPLGELL 258 Query: 252 NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD-KRALVRQRK--KIHPI 308 + PE + +EFH RL P+ +++++A R VRQ K K+ P Sbjct: 259 KIDG------PEAV----AEFHWRLA---IPLAIPIMTLIAVPLARVNVRQGKFAKMLP- 304 Query: 309 FISLSISFGVFWGFSYIIHKIEQN---PYYIPILYLFLFCISSIFLLMIKKK 357 ++ + G F G K Q+ P Y+ + ++ L + LL+ K + Sbjct: 305 --AVLLYLGYF-GLMVAGRKALQDGVIPLYLGMWWIHLSALIMGILLLGKDR 353 >gi|78186598|ref|YP_374641.1| hypothetical protein Plut_0723 [Chlorobium luteolum DSM 273] gi|78166500|gb|ABB23598.1| conserved hypothetical protein [Chlorobium luteolum DSM 273] Length = 442 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 57/250 (22%), Positives = 108/250 (43%), Gaps = 26/250 (10%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQ---------ILQRINLVSSSTESLNILLK 51 MK + YIL+ + F ++ L I+F+ ++Q I + I+ +S + +L Sbjct: 1 MKIIDRYILKSLVGPFFLAFLTIMFV-LILQFFANFADRFIGRGIDFMSL----IELLAL 55 Query: 52 ISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLS 111 S +++ PM M S+ +E+ + +G S L+ PV+ + LLS Sbjct: 56 QSAWMVGLAAPMAVLIGVVM----AFGSLTTTSEMTVFRASGLSLYRLMLPVVIVGFLLS 111 Query: 112 IFLFISENIIEPKCRSTIKQL-SAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNT 169 + + N+++P+ + + L S A+ TF + EN F L D I + + + Sbjct: 112 LLVERFNNVVQPQVKYKARSLMSDIAKAKPTFG-ITENAFSPLVDGYSILVQHADEKTGS 170 Query: 170 LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQA----IILNDGEVHR-KSPISKDISIMKFK 224 + I I D+ + A+ G ID ++L+DG++H + P + M+F Sbjct: 171 IGDIIIYDATRKDYRSVITAKDGVIDFSADGRYLVMMLSDGQIHEVQVPGHRLYRKMEFD 230 Query: 225 SYTLQTESAN 234 + ES Sbjct: 231 RHRFVFESTG 240 >gi|114048399|ref|YP_738949.1| permease YjgP/YjgQ family protein [Shewanella sp. MR-7] gi|113889841|gb|ABI43892.1| permease YjgP/YjgQ family protein [Shewanella sp. MR-7] Length = 370 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 65/292 (22%), Positives = 119/292 (40%), Gaps = 31/292 (10%) Query: 80 MNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLA 139 M E++I+ G S + + L LA++ +F + P Q+ KAQ Sbjct: 79 MYAENEMVILHGVGVSEWYVTRVTLILALINMLFTGYLSLYVAPWAEEQQNQVLEKAQSE 138 Query: 140 LTFSYLEENLFFRLDDDLYIK-ISKYNPNNTLQGIFIVDSRDTQTH----KIYYAQSGSI 194 + L + F + + + + +N L +F+ D + A+ G + Sbjct: 139 AGLAALVQGRFQASPNGRAVLFVERIGKDNELDKVFVAQLPDPNDEIGLTNVVVAKGGRV 198 Query: 195 DLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLL 251 D+ Q + LNDG ++ SP KD +++F Y +Q + K + +L+ L+ Sbjct: 199 QEDQNGSQQLHLNDGVRYQGSPQQKDYQMIEFGGYKMQIKEQQVDERRRKLSALSLADLM 258 Query: 252 NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD-KRALVRQRK--KIHPI 308 PE + +EFH RL P+ +++++A R VRQ K K+ P Sbjct: 259 KVEG------PEAV----AEFHWRLA---IPLAIPIMTLIAVPLARVNVRQGKFAKMLPA 305 Query: 309 FISLSISFGVFWGFSYIIHKIEQN---PYYIPILYLFLFCISSIFLLMIKKK 357 + + G F G K Q+ P Y+ + ++ L + LL+ K + Sbjct: 306 VL---LYLGYF-GLMVAGRKALQDGVIPQYLGMWWIHLSALIMGILLLGKDR 353 >gi|107023405|ref|YP_621732.1| permease YjgP/YjgQ [Burkholderia cenocepacia AU 1054] gi|105893594|gb|ABF76759.1| permease YjgP/YjgQ [Burkholderia cenocepacia AU 1054] Length = 364 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 55/220 (25%), Positives = 100/220 (45%), Gaps = 21/220 (9%) Query: 48 ILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLA 107 I L + GYL V+ +VT F + VLT R++E+++ +G S LIKP+ A Sbjct: 52 IGLTVIGYL--AVMLVVTLFVSIL---FVLTRWYRDSEMVVWLASGVSLTRLIKPIGVFA 106 Query: 108 ----ILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIK-IS 162 +L++ F F+ P K + A+ Q S L F + + I Sbjct: 107 TPIILLITFFAFVGW----PWSNQQSKMIRARFQQRDEISLLAPGQFRESAANHRVFFIE 162 Query: 163 KYNPNNT-LQGIFIVDSRDTQTHKIYYAQSG----SIDLDRQAIILNDGEVHRKSPISKD 217 K +P+ + +Q +F+ + + + + + +Q+G S D DR ++L DG + +P + Sbjct: 163 KMSPDQSKVQNVFVTSTENGKVN-VVVSQTGHTETSKDGDR-FVVLEDGRRYDGTPGQPN 220 Query: 218 ISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNN 257 IM+F+ Y ++ S + + + L NP +N Sbjct: 221 FKIMEFERYGVKITSKPVTNVQTTNSTPTPDLLRNPTRDN 260 >gi|221066429|ref|ZP_03542534.1| permease YjgP/YjgQ family protein [Comamonas testosteroni KF-1] gi|220711452|gb|EED66820.1| permease YjgP/YjgQ family protein [Comamonas testosteroni KF-1] Length = 369 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 46/241 (19%), Positives = 102/241 (42%), Gaps = 9/241 (3%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 F+ I + + RSF + + ++ + + +++ + + S + ++ + G+ + LP Sbjct: 3 FDSSIRKELARSFGATAVVLITVVMTMMLIRTLGQAYKGSVSPSDVMLVMGFTVLGQLPT 62 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLA---ILLSIFLFISENI 120 + + L+ M R++E++I G +L+KP+L A IL++ L + Sbjct: 63 ILGLSLFVAIVGSLSRMYRDSEMVIWFAAGQGLASLLKPLLRFAWPVILITAVLALG--- 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYNPNNTLQGIFIVDSR 179 + P I+Q+ + Q + F + + K +P++ V SR Sbjct: 120 VLPWSYQQIEQIKTQFQQRSDLDRIAPGEFQESAGGTRVFFVDKDSPSDMAASNVFVVSR 179 Query: 180 DTQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 D + A+ + + ++ +IL DG+ + I +FK Y +Q ++ N Sbjct: 180 DPGKESVTSAKGAHLAVIKGQRMVILEDGQRMETRSDDGSVRITEFKEYGVQVDNDNPVA 239 Query: 238 I 238 I Sbjct: 240 I 240 >gi|22299113|ref|NP_682360.1| hypothetical protein tll1570 [Thermosynechococcus elongatus BP-1] gi|22295295|dbj|BAC09122.1| tll1570 [Thermosynechococcus elongatus BP-1] Length = 378 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 52/291 (17%), Positives = 115/291 (39%), Gaps = 10/291 (3%) Query: 36 INLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS 95 + ++ + L ILL++ GY +P VL +V P + ++ ++ E + + + G Sbjct: 49 VRQIADAQLPLTILLQLIGYQLPAVLVLVFPMAVLLAVVGAMSRLSEEGEWIALRSVGIC 108 Query: 96 RITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAK-AQLALTFSYLEENLFFRLD 154 ++ PV+ A+L+S P + K+L + Q + + + D Sbjct: 109 LGRVLIPVVVFALLVSGLTLALNETAVPIAKYESKKLMGELLQQERSLGSGTDIFYPEYD 168 Query: 155 DDLYIKISKYN---PNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRK 211 ++ Y + +QGI ++D Q ++ A+S ++ +L+ G + Sbjct: 169 RHGNVRRLYYGHRFDGSRIQGITVLDFSQPQVTQVISAESAEWNVRESRWLLSQGIAYLI 228 Query: 212 SPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNP---NNPNYRPELLETY 268 S ++++F ++ S + + LS +P+ PEL+ Sbjct: 229 SHTGVSRNLLQFDQQEIRLPRPAQSQPLRPTDVNELSITQARRALQRLDPDREPELVRAL 288 Query: 269 RSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVF 319 + + Q V+F L+ + + QR+ IS+++ FG + Sbjct: 289 KVHLAQSYAQPFLAVVFALLGVGFGLSPS---QRRGRQGFGISVAVVFGQY 336 >gi|115352567|ref|YP_774406.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria AMMD] gi|115282555|gb|ABI88072.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria AMMD] Length = 363 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 52/218 (23%), Positives = 98/218 (44%), Gaps = 18/218 (8%) Query: 48 ILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLA 107 I L + GYL V+ +VT F + VLT R++E+++ +G S LIKP+ A Sbjct: 52 IGLTVIGYL--AVMLVVTLFVSIL---FVLTRWYRDSEMVVWLASGVSLTRLIKPIGVFA 106 Query: 108 ----ILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIK-IS 162 +L++ F F+ P K + A+ Q S L F + + I Sbjct: 107 TPLILLIAFFAFVGW----PWSNQQSKMIKARFQQRDEISLLAPGQFRESASNHRVFFIE 162 Query: 163 KYNPNNT-LQGIFIVDSRDTQTHKI--YYAQSGSIDLDRQAIILNDGEVHRKSPISKDIS 219 K +P+ + +Q +F+ + + + + + + + + D DR ++L DG + +P + Sbjct: 163 KMSPDQSKVQNVFVTSTENGKVNIVVSHTGHTETKDGDR-FVVLEDGRRYDGTPGQPNFK 221 Query: 220 IMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNN 257 IM+F+ Y ++ S + + + L NP +N Sbjct: 222 IMEFQRYGVKITSTPVTNVPTTNSTPTPDLLRNPTRDN 259 >gi|254247471|ref|ZP_04940792.1| hypothetical protein BCPG_02269 [Burkholderia cenocepacia PC184] gi|124872247|gb|EAY63963.1| hypothetical protein BCPG_02269 [Burkholderia cenocepacia PC184] Length = 364 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 51/219 (23%), Positives = 98/219 (44%), Gaps = 19/219 (8%) Query: 48 ILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLA 107 I L + GYL V+ +VT F + VLT R++E+++ +G S LIKP+ A Sbjct: 52 IGLTVIGYL--AVMLVVTLFVSIL---FVLTRRYRDSEMVVWLASGVSLTRLIKPIGVFA 106 Query: 108 ----ILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIK-IS 162 +L++ F F+ P K + A+ Q S L F + + I Sbjct: 107 TPIILLITFFAFVGW----PWSNQQSKMIRARFQQRDEISLLAPGQFRESAANHRVFFIE 162 Query: 163 KYNPNNT-LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDI 218 K +P+ + +Q +F+ + + + + + +Q+G + + ++L DG + +P + Sbjct: 163 KMSPDQSKVQNVFVTSTENGKVN-VVVSQTGHTETSKDGDRFVVLEDGRRYDGTPGQPNF 221 Query: 219 SIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNN 257 IM+F+ Y ++ S + + + L NP +N Sbjct: 222 KIMEFERYGVKITSKPVTNVQTTNSTPTPDLLRNPTRDN 260 >gi|172061426|ref|YP_001809078.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria MC40-6] gi|171993943|gb|ACB64862.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria MC40-6] Length = 363 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 52/218 (23%), Positives = 98/218 (44%), Gaps = 18/218 (8%) Query: 48 ILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLA 107 I L + GYL V+ +VT F + VLT R++E+++ +G S LIKP+ A Sbjct: 52 IGLTVIGYL--AVMLVVTLFVSIL---FVLTRWYRDSEMVVWLASGVSLTRLIKPIGVFA 106 Query: 108 ----ILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIK-IS 162 +L++ F F+ P K + A+ Q S L F + + I Sbjct: 107 TPLILLIAFFAFVGW----PWSNQQSKMIKARFQQRDEISLLAPGQFRESASNHRVFFIE 162 Query: 163 KYNPNNT-LQGIFIVDSRDTQTHKI--YYAQSGSIDLDRQAIILNDGEVHRKSPISKDIS 219 K +P+ + +Q +F+ + + + + + + + + D DR ++L DG + +P + Sbjct: 163 KMSPDQSKVQNVFVTSTENGKVNIVVSHTGHTETKDGDR-FVVLEDGRRYDGTPGQPNFK 221 Query: 220 IMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNN 257 IM+F+ Y ++ S + + + L NP +N Sbjct: 222 IMEFQRYGVKITSTPVTNVPTTNSTPTPDLLRNPTRDN 259 >gi|218778208|ref|YP_002429526.1| permease YjgP/YjgQ family protein [Desulfatibacillum alkenivorans AK-01] gi|218759592|gb|ACL02058.1| permease YjgP/YjgQ family protein [Desulfatibacillum alkenivorans AK-01] Length = 353 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 10/137 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWV-IQILQRINLVSSSTESLNILLKISGYL--- 56 MK YI R + ++ L++ LF V + +V + ++I+ ++ I L GY Sbjct: 1 MKIISKYIARALFKN-LLTILFAVVVIYVAVDFFEKIDDFMAA----KIPLLTVGYFFLL 55 Query: 57 -IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLF 115 IP V V P + V+ M R+ E++ + G S +L+KP+ + ++ S+FLF Sbjct: 56 RIPYVAAQVLPVGVLLSAMVVIGLMARHNEIIAYASGGGSSFSLLKPIAVMGVIASLFLF 115 Query: 116 ISENIIEPKCRSTIKQL 132 II P + Q+ Sbjct: 116 AFNEIIVPAAAAEANQI 132 >gi|77361337|ref|YP_340912.1| hypothetical protein PSHAa2421 [Pseudoalteromonas haloplanktis TAC125] gi|76876248|emb|CAI87470.1| putative membrane protein [Pseudoalteromonas haloplanktis TAC125] Length = 355 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 35/175 (20%), Positives = 82/175 (46%), Gaps = 1/175 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ + Y+ R I ++ + L +V I+ +I+ + ++ V + L + + Y IP Sbjct: 2 MKTLDWYLGRSILQTTGFALLVLVGISTLIKFIDQLKSVGRGSYDLMTAMLYTLYTIPGD 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L ++ N+EL+++ G SR+ +I V+ A+ +++ + Sbjct: 62 LVVFFPMAALIGGLTGLGALASNSELVVMHAAGMSRLQIISSVMKTAVFMALCMMALGEW 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI 175 P+ + K++ +A ++ ++ + D + +I I + N L G+ + Sbjct: 122 GVPEAQLQAKEMRNQAIHGGDVFNAQKGVWAK-DGNNFINIEDVDQNGKLNGVHM 175 >gi|91762159|ref|ZP_01264124.1| Predicted permease YjgP/YjgQ family protein [Candidatus Pelagibacter ubique HTCC1002] gi|91717961|gb|EAS84611.1| Predicted permease YjgP/YjgQ family protein [Candidatus Pelagibacter ubique HTCC1002] Length = 378 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 44/222 (19%), Positives = 86/222 (38%) Query: 16 FLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTN 75 FL+ I I WV+Q + ++ V + K + P ++ + PF + + Sbjct: 17 FLLVVFTISIIIWVLQAVNYLDFVIEDGHGFLVYFKYTLLSFPKIISRIFPFTVFLAFSY 76 Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAK 135 +L EL+I N G +I I + ++ + + +I P + + Sbjct: 77 ILLKYENKNELVIFWNFGIKKINFINFFIKFSLWFVLISLLLNAVITPFAQDKARSFIRS 136 Query: 136 AQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSID 195 + L S L+ F + +L I + N L IF+ + D + +A++ ++ Sbjct: 137 SNLDFFESVLKPKKFIDIIGNLTIYFDEKNKKGELINIFLNEKTDINNSQTTFAKTAIVN 196 Query: 196 LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 +D IL + + I+ IS +F NS+T Sbjct: 197 IDNNKKILTLYDGKSINVINGKISEFEFSKIDYNISKFNSNT 238 >gi|67459766|ref|YP_247390.1| permease [Rickettsia felis URRWXCal2] gi|67005299|gb|AAY62225.1| Predicted permeases [Rickettsia felis URRWXCal2] Length = 369 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 43/211 (20%), Positives = 103/211 (48%), Gaps = 4/211 (1%) Query: 26 IAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTE 85 I W+ QIL+ + L + ++ + ++PT+L ++ P + + ++ + Sbjct: 35 IVWITQILKLLYLFDKGIKVMD-FFSLIVLVLPTLLFILLPVITVIAVIYIYNNLKVERQ 93 Query: 86 LLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYL 145 L+I+ +G + + L P L+ A+++ + + + I P +K + S + Sbjct: 94 LIILQASGVNNVQLALPALYAALIVMLLAYYISSTILPLSHINLKSRLNFIKNNYISSMI 153 Query: 146 EENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDL-DRQAII-L 203 EE F ++ D+ + I K + N + G+ I D+R+ + +A SG++++ D I L Sbjct: 154 EEKTFNKVTKDITVFIDKKSAGNIMNGVIIFDNRNADNPSVVFAGSGTLNIYDNNPIFEL 213 Query: 204 NDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 N G + ++ ++ +++ + F S ++ ++ N Sbjct: 214 NKG-IRQEYDVNGNLTQLTFDSLMIKLQNDN 243 >gi|171316728|ref|ZP_02905940.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria MEX-5] gi|171098078|gb|EDT42893.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria MEX-5] Length = 363 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 52/218 (23%), Positives = 98/218 (44%), Gaps = 18/218 (8%) Query: 48 ILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLA 107 I L + GYL V+ +VT F + VLT R++E+++ +G S LIKP+ A Sbjct: 52 IGLTVIGYL--AVMLVVTLFVSIL---FVLTRWYRDSEMVVWLASGVSLTRLIKPIGVFA 106 Query: 108 ----ILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIK-IS 162 +L++ F F+ P K + A+ Q S L F + + I Sbjct: 107 TPIILLIAFFAFVGW----PWSNQQSKMIKARFQQRDEISLLAPGQFRESASNHRVFFIE 162 Query: 163 KYNPNNT-LQGIFIVDSRDTQTHKI--YYAQSGSIDLDRQAIILNDGEVHRKSPISKDIS 219 K +P+ + +Q +F+ + + + + + + + + D DR ++L DG + +P + Sbjct: 163 KMSPDQSKVQNVFVTSTENGKVNIVVSHTGHTETKDGDR-FVVLEDGRRYDGTPGQPNFK 221 Query: 220 IMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNN 257 IM+F+ Y ++ S + + + L NP +N Sbjct: 222 IMEFQRYGVKITSTPVTNVPTTNSTPTPDLLRNPTRDN 259 >gi|320101899|ref|YP_004177490.1| permease YjgP/YjgQ family protein [Isosphaera pallida ATCC 43644] gi|319749181|gb|ADV60941.1| permease YjgP/YjgQ family protein [Isosphaera pallida ATCC 43644] Length = 507 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 30/129 (23%), Positives = 64/129 (49%), Gaps = 3/129 (2%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + Y++R + SF ++ L I I + ++ + + L+ +++I+ YLIP LP Sbjct: 7 LQRYVIRQLLGSFALALLAISSIIVLFLVMAE---AAKAGLGLDQIVQIAPYLIPGTLPY 63 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P T V + + E+ + G S T++ P + L+I+LS L+++ + + P Sbjct: 64 TVPVALLFSVTVVYGRLAGDNEITAVKAAGLSVWTVLWPCILLSIVLSGALYLAASHVIP 123 Query: 124 KCRSTIKQL 132 + +K++ Sbjct: 124 EANHAVKRV 132 >gi|253997950|ref|YP_003050013.1| permease [Methylovorus sp. SIP3-4] gi|253984629|gb|ACT49486.1| permease YjgP/YjgQ family protein [Methylovorus sp. SIP3-4] Length = 356 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 40/196 (20%), Positives = 87/196 (44%), Gaps = 2/196 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+ + I S ++ + ++ + ++Q + + T LN +L P Sbjct: 1 MKLLNRYLTQEIVSSIMLIMVALLAMFSFFDLIQELESIGKGTYGLNKVLMFVLLSAPGH 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + T L ++R++EL+I+ +G S T+ + +L + ++ ++ F Sbjct: 61 VYEVVPVAVLVGTMYALGQLSRHSELIILRVSGISIATIARSLLKVGLIFAVITFFVGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P T ++L +A ++ L+ + D ++ + + P++ L I I + D Sbjct: 121 VTPYSEKTAQRLRIQATDSVVAQDFRSGLWVK-DGRSFVNVEEVMPDSELMNIHIYEFDD 179 Query: 181 T-QTHKIYYAQSGSID 195 T I A++G D Sbjct: 180 TFHLRTISDAKTGRFD 195 >gi|325527102|gb|EGD04517.1| YjgP/YjgQ like transporter [Burkholderia sp. TJI49] Length = 363 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 54/219 (24%), Positives = 98/219 (44%), Gaps = 20/219 (9%) Query: 48 ILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLA 107 I L + GYL V+ +VT F + VLT R++E+++ +G S LIKP+ A Sbjct: 52 IGLTVIGYL--AVMLVVTLFVSILF---VLTRWYRDSEMVVWLASGVSLTRLIKPIGVFA 106 Query: 108 ----ILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIK-IS 162 +L++ F F+ P K + A+ Q S L F + + I Sbjct: 107 TPIILLIAFFAFVGW----PWSNQQSKMIKARFQQRDEISLLAPGQFRESATNHRVFFIE 162 Query: 163 KYNPNNT-LQGIFIVDSRDTQTHKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDI 218 K P+ + +Q +F+ + + + + + +Q+G D DR ++L +G + +P + Sbjct: 163 KMTPDQSKVQNVFVTSTENGKVN-VVVSQTGHTETRDGDR-FVVLENGRRYDGTPGQPNF 220 Query: 219 SIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNN 257 IM+F+ Y ++ S + + L L NP +N Sbjct: 221 KIMEFQRYGVKITSTPVVNVPTTNSTPTLDLLRNPTRDN 259 >gi|255066291|ref|ZP_05318146.1| permease, YjgP/YjgQ family [Neisseria sicca ATCC 29256] gi|255049501|gb|EET44965.1| permease, YjgP/YjgQ family [Neisseria sicca ATCC 29256] Length = 371 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 43/223 (19%), Positives = 107/223 (47%), Gaps = 11/223 (4%) Query: 15 SFLMSCLFIVFIAWVIQILQRINLVSSSTE---SLNILLKISGYLIPTVLPMVTPFCFAM 71 SF +F+V +A V+ Q INL+ + + +++ +L + G+ + + P++ + Sbjct: 12 SFTAVGIFVVLLA-VLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTPLLLVLTAFI 70 Query: 72 ETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP----KCRS 127 T VLT R++E+ + + G + I+PV+ A+ ++ + + + + P + R Sbjct: 71 STLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFALLIAVMQLWVMPWAELRSRE 130 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 + L K +L++ + E N + + +Y + + ++ +F+ + I Sbjct: 131 YAEILKQKQELSMVEAG-EFNSLGKRNGRVYFVETFDTESGIMKNLFLREQDKNGNDNII 189 Query: 188 YAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 +A+ G+ L +++ + L +G + +P D + + F++ +L Sbjct: 190 FAKEGNFSLNDNKRTLDLRNGYRYSGTPGKADYNRVSFQNLSL 232 >gi|327398670|ref|YP_004339539.1| permease YjgP/YjgQ family protein [Hippea maritima DSM 10411] gi|327181299|gb|AEA33480.1| permease YjgP/YjgQ family protein [Hippea maritima DSM 10411] Length = 348 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 28/121 (23%), Positives = 61/121 (50%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YI ++F +S F V + + ++ + + S+ ++ Y P + Sbjct: 1 MKKIHKYITIFFLKTFFISLAFFVLLFVLSDFFSNLSDIVGNGVSIKYIISYYVYYTPFI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + PF FA+ + L ++ E++++ ++G S + KPVLF +I++++ +F S+ + Sbjct: 61 IYFSLPFIFALSSLVSLGYLSSKNEIIVMRSSGLSIFKIAKPVLFFSIIVAVLMFASKEL 120 Query: 121 I 121 I Sbjct: 121 I 121 >gi|189501480|ref|YP_001957197.1| permease YjgP/YjgQ family protein [Candidatus Amoebophilus asiaticus 5a2] gi|189496921|gb|ACE05468.1| permease YjgP/YjgQ family protein [Candidatus Amoebophilus asiaticus 5a2] Length = 527 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 1/117 (0%) Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PM P + + V S+ EL + + G I +++P+LFL LLSIF++ S I Sbjct: 65 PMAFPLATLVSSLMVFGSLGEQLELTALKSAGIPFIRILRPLLFLVTLLSIFVYFSNGYI 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVD 177 PK L + ++E +F+ D I++ + P+ TL+ I I D Sbjct: 125 VPKVTVKAHTLLYDLRKKKPSIAIKEGVFYNGIPDYSIRVERKLPDQKTLEDIVIYD 181 >gi|257468008|ref|ZP_05632104.1| hypothetical protein FulcA4_01652 [Fusobacterium ulcerans ATCC 49185] gi|317062294|ref|ZP_07926779.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185] gi|313687970|gb|EFS24805.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185] Length = 362 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 51/226 (22%), Positives = 102/226 (45%), Gaps = 16/226 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVS----SSTESLNILLKISGYL 56 +K + YI + +SF +S + V I V Q+ + I VS S+ ES+ +L + Sbjct: 3 IKIIDKYISKNFIKSFFLSLIAFVGIFLVSQLFKVIRYVSDGRFSANESITYILT----M 58 Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 IP +L V P + + ++SM N E++ + G S RI L P+ A++ + Sbjct: 59 IPKILIDVAPLAVLLGSLMTVSSMASNLEIISLKTAGISFKRIVLF-PICISAVIAVMVF 117 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKI-SKYNPNNTL-QG 172 +I++++ R +++ + ++N F R ++ Y+ + K N + Sbjct: 118 YINDSLYPYSVRKN-REIKDGERAKREMPVEKKNAFLRGENSNYVYLMGKINRETGFGEN 176 Query: 173 IFIVDSRD--TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK 216 I IVD + + +I A+ G + ++ +L D ++ + K Sbjct: 177 IEIVDLNEEFNKVERIITAKEGRYNFSKKVWVLKDANIYDGEKLEK 222 >gi|261345122|ref|ZP_05972766.1| inner membrane protein YjgP [Providencia rustigianii DSM 4541] gi|282566810|gb|EFB72345.1| inner membrane protein YjgP [Providencia rustigianii DSM 4541] Length = 365 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 42/199 (21%), Positives = 81/199 (40%), Gaps = 15/199 (7%) Query: 84 TELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFS 143 +E+ ++ G + L+K L LA+L ++ + + P +Q+ A+ + Sbjct: 83 SEITVMHACGLGKNVLVKAALVLAVLTALVAIANITWMLPWSSQYKEQVLGDAKANPGLA 142 Query: 144 YLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR--DTQTHKIYYAQSGSIDLD---R 198 + E F D+ ++ N + +F+ R + Q + A SG + D R Sbjct: 143 AMVEGQFKTTKDNNFVLYIGEVKGNDFKNVFLAQLRTANEQRPSVVVADSGYMKEDANGR 202 Query: 199 QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNP 258 Q ++L+ G + + + +D I F +Y + + K + + L N N Sbjct: 203 QVVVLDQGTRYEGTALLRDFRITDFMNYQAVVDHRTTEVRTDKVEQKTMMQLWNGND--- 259 Query: 259 NYRPELLETYRSEFHKRLT 277 PE+ +EFH RLT Sbjct: 260 ---PEI----NAEFHWRLT 271 >gi|161524006|ref|YP_001579018.1| permease YjgP/YjgQ family protein [Burkholderia multivorans ATCC 17616] gi|189351233|ref|YP_001946861.1| YjgP/YjgQ-like transporter [Burkholderia multivorans ATCC 17616] gi|221199307|ref|ZP_03572351.1| putative membrane protein [Burkholderia multivorans CGD2M] gi|221205791|ref|ZP_03578806.1| putative membrane protein [Burkholderia multivorans CGD2] gi|221211524|ref|ZP_03584503.1| putative membrane protein [Burkholderia multivorans CGD1] gi|160341435|gb|ABX14521.1| permease YjgP/YjgQ family protein [Burkholderia multivorans ATCC 17616] gi|189335255|dbj|BAG44325.1| YjgP/YjgQ-like transporter [Burkholderia multivorans ATCC 17616] gi|221168885|gb|EEE01353.1| putative membrane protein [Burkholderia multivorans CGD1] gi|221174629|gb|EEE07061.1| putative membrane protein [Burkholderia multivorans CGD2] gi|221180592|gb|EEE12995.1| putative membrane protein [Burkholderia multivorans CGD2M] Length = 364 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 50/219 (22%), Positives = 97/219 (44%), Gaps = 19/219 (8%) Query: 48 ILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLA 107 I L + GYL V+ +VT F + VLT R++E+++ +G S LIKP+ A Sbjct: 52 IGLTVIGYL--AVMLVVTLFVSIL---FVLTRWYRDSEMVVWLASGVSLTRLIKPIGVFA 106 Query: 108 ----ILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIK-IS 162 +L++ F F+ P + + A+ Q S L F + + I Sbjct: 107 TPIIVLITFFAFVGW----PWSNQQSRLIKARFQQRDEISLLAPGQFRESASNHRVFFIE 162 Query: 163 KYNPNNT-LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDI 218 K P+ + +Q +F+ + + + + + +Q+G + + ++L DG + +P + Sbjct: 163 KMTPDQSKVQNVFVTSTENGKVN-VVVSQTGHTETTKDGDRFVVLEDGRRYDGTPGQPNF 221 Query: 219 SIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNN 257 IM+F+ Y ++ S + ++ L NP +N Sbjct: 222 KIMEFERYGVKITSKPVVNVPTTSSTPTPELLRNPTRDN 260 >gi|222099907|ref|YP_002534475.1| Permease YjgP/YjgQ family protein [Thermotoga neapolitana DSM 4359] gi|221572297|gb|ACM23109.1| Permease YjgP/YjgQ family protein [Thermotoga neapolitana DSM 4359] Length = 1048 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 1/116 (0%) Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + ++ + EL+ I G S+ LI P LFL++LLS+ +F + Sbjct: 48 VAMGVPVGVLLSIFWTFSKLSEDRELMAIQVHGISQKNLIVPFLFLSVLLSVIVFFLNDQ 107 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFI 175 + P +S ++ +K L ++ EN+ ++ +D Y + KY+ NTL + I Sbjct: 108 VVPVYQSRAEEAMSKYVLKKPEVFVVENVISKIGEDQYFYVEKYDEKTNTLWNVVI 163 >gi|170697653|ref|ZP_02888741.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria IOP40-10] gi|170137401|gb|EDT05641.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria IOP40-10] Length = 363 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 52/218 (23%), Positives = 97/218 (44%), Gaps = 18/218 (8%) Query: 48 ILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLA 107 I L + GYL V+ +VT F + VLT R++E+++ +G S LIKP+ A Sbjct: 52 IGLTVIGYL--AVMLVVTLFVSIL---FVLTRWYRDSEMVVWLASGVSLTRLIKPIGVFA 106 Query: 108 ----ILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIK-IS 162 +L++ F F+ P K + A+ Q S L F + + I Sbjct: 107 TPIILLIAFFAFVGW----PWSNQQSKMIKARFQQRDEISLLAPGQFRESASNHRVFFIE 162 Query: 163 KYNPNNT-LQGIFIVDSRDTQTHKI--YYAQSGSIDLDRQAIILNDGEVHRKSPISKDIS 219 K P+ + +Q +F+ + + + + + + + + D DR ++L DG + +P + Sbjct: 163 KMAPDQSKVQNVFVTSTENGKVNIVVSHTGHTETKDGDR-FVVLEDGRRYDGTPGQPNFK 221 Query: 220 IMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNN 257 IM+F+ Y ++ S + + + L NP +N Sbjct: 222 IMEFQRYGVKITSTPVTNVPTTNSTPTPDLLRNPTRDN 259 >gi|153808346|ref|ZP_01961014.1| hypothetical protein BACCAC_02640 [Bacteroides caccae ATCC 43185] gi|149129249|gb|EDM20465.1| hypothetical protein BACCAC_02640 [Bacteroides caccae ATCC 43185] Length = 638 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 45/202 (22%), Positives = 92/202 (45%), Gaps = 10/202 (4%) Query: 12 IGRSFLM---SCLFIVFIAWVIQILQRI--NLVSSSTESLNILLKISGYLIPTVLPMVTP 66 I +SF+M FI +++Q L R LV E ++++ + Y T++P+ P Sbjct: 17 IVKSFMMLFVGTFFICLFIFMMQFLWRYVDELVGKGLE-MSVMAQFFFYSALTLVPVSLP 75 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + + + ELL + G S + +++P++F L F +N++ P + Sbjct: 76 LAVLLASLITFGNFGERYELLAMKAAGISLLKIMRPLVFFVCGLVGISFYFQNVVGPIAQ 135 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSRDT-QTH 184 + + L + + E +F+ D +KI+K N L + I D ++ + Sbjct: 136 AKLGTLILSMKQKSPELDIPEGVFYSEIPDYNLKIAKKNRKTGMLYDVLIYDLKEGFEKA 195 Query: 185 KIYYAQSGSIDL--DRQAIILN 204 ++ YA SG +++ D+Q + L+ Sbjct: 196 RVIYADSGRLEMTADKQHLWLH 217 >gi|237712765|ref|ZP_04543246.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262409745|ref|ZP_06086283.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|229447177|gb|EEO52968.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262352398|gb|EEZ01500.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|295084616|emb|CBK66139.1| Predicted permeases [Bacteroides xylanisolvens XB1A] Length = 632 Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust. Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 10/200 (5%) Query: 14 RSFLM---SCLFIVFIAWVIQILQRI--NLVSSSTESLNILLKISGYLIPTVLPMVTPFC 68 +SFLM FI +++Q L R LV E ++++ + Y T++P+ P Sbjct: 13 KSFLMLFIGTFFICLFIFMMQFLWRYVDELVGKGLE-MSVMAQFFFYSALTLVPVSLPLA 71 Query: 69 FAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRST 128 + + + ELL + G S + +++P+ F L F +N++ P ++ Sbjct: 72 VLLASLITFGNFGERYELLAMKAAGISLLKIMRPLAFFVCGLVGVSFYFQNVVGPIAQAK 131 Query: 129 IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSRDT-QTHKI 186 + L + + E +F+ D +K++K N L + I +D + +I Sbjct: 132 LGTLILSMKQKSPELDIPEGVFYSEIKDYNLKVAKKNRKTGMLYDVLIYSMKDGFEKARI 191 Query: 187 YYAQSGSIDL--DRQAIILN 204 YA SG +++ D+Q + L+ Sbjct: 192 IYADSGRLEMTADKQHLWLH 211 >gi|313886927|ref|ZP_07820630.1| putative phage tail component, N-terminal domain protein [Porphyromonas asaccharolytica PR426713P-I] gi|332300780|ref|YP_004442701.1| permease YjgP/YjgQ family protein [Porphyromonas asaccharolytica DSM 20707] gi|312923624|gb|EFR34430.1| putative phage tail component, N-terminal domain protein [Porphyromonas asaccharolytica PR426713P-I] gi|332177843|gb|AEE13533.1| permease YjgP/YjgQ family protein [Porphyromonas asaccharolytica DSM 20707] Length = 678 Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust. Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 9/197 (4%) Query: 14 RSFLMSCLFIVFIAWVIQILQ----RINLVSSSTESLNILLKISGYLIPTVLPMVTPFCF 69 RSFL L + I W + ++Q ++ + + +LL++ Y VLP P Sbjct: 14 RSFLPLLLMTLLICWFVVLMQFLWQHVDDLVGKGMDVGVLLEVIFYAGLYVLPTAVPLGV 73 Query: 70 AMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFL--AILLSIFLFISENIIEPKCRS 127 + + ++ ELL + + G ++KP++ L I L +F+++ + + R Sbjct: 74 LLASLMTFGNLGERLELLAMKSAGVPLSKIMKPLVILVTCIALGLFVYLDRGVQKASVR- 132 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS-KYNPNNTLQGIFIVDSRDTQTHKI 186 + Q+ A+ A + + +FF D I + K +TL + I D + T +I Sbjct: 133 -VYQILFSARYARPELEIPKGIFFNGIDGYSIYVGDKDAATSTLYNVMIYDLSEQHTPRI 191 Query: 187 YYAQSGSIDLDRQAIIL 203 A +G + +D + L Sbjct: 192 ILADTGRLLMDESKLYL 208 >gi|160885006|ref|ZP_02066009.1| hypothetical protein BACOVA_03003 [Bacteroides ovatus ATCC 8483] gi|156109356|gb|EDO11101.1| hypothetical protein BACOVA_03003 [Bacteroides ovatus ATCC 8483] Length = 632 Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust. Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 10/200 (5%) Query: 14 RSFLM---SCLFIVFIAWVIQILQRI--NLVSSSTESLNILLKISGYLIPTVLPMVTPFC 68 +SFLM FI +++Q L R LV E ++++ + Y T++P+ P Sbjct: 13 KSFLMLFIGTFFICLFIFMMQFLWRYVDELVGKGLE-MSVMAQFFFYSALTLVPVSLPLA 71 Query: 69 FAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRST 128 + + + ELL + G S + +++P+ F L F +N++ P ++ Sbjct: 72 VLLASLITFGNFGERYELLAMKAAGISLLKIMRPLAFFVCGLVGVSFYFQNVVGPIAQAK 131 Query: 129 IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSRDT-QTHKI 186 + L + + E +F+ D +K++K N L + I +D + +I Sbjct: 132 LGTLILSMKQKSPELDIPEGVFYSEIKDYNLKVAKKNRKTGMLYDVLIYSMKDGFEKARI 191 Query: 187 YYAQSGSIDL--DRQAIILN 204 YA SG +++ D+Q + L+ Sbjct: 192 IYADSGRLEMTADKQHLWLH 211 >gi|268594204|ref|ZP_06128371.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268595873|ref|ZP_06130040.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|293399673|ref|ZP_06643825.1| hypothetical protein NGNG_01868 [Neisseria gonorrhoeae F62] gi|268547593|gb|EEZ43011.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268549661|gb|EEZ44680.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|291609924|gb|EFF39047.1| hypothetical protein NGNG_01868 [Neisseria gonorrhoeae F62] Length = 384 Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust. Identities = 46/223 (20%), Positives = 104/223 (46%), Gaps = 11/223 (4%) Query: 15 SFLMSCLFIVFIAWVIQILQRINLVSSSTE---SLNILLKISGYLIPTVLPMVTPFCFAM 71 SF +F+V +A V+ Q INL+ + + +++ +L + G+ + + P++ + Sbjct: 25 SFTAVGIFVVLLA-VLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTPLLLVLTAFI 83 Query: 72 ETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP----KCRS 127 T VLT R++E+ + + G + I+PV+ A+ +I + + + + P + R Sbjct: 84 STLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAILIAVMQLWVIPWAELRSRE 143 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 + L K +L+L + NL R + +Y + + ++ +F+ + I Sbjct: 144 YAEILKQKQELSLVEAGEFNNLGKR-NGRVYFVETFDTESGIMKNLFLREQDKNGGDNII 202 Query: 188 YAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 +A+ G+ L +++ + L G + +P D + + F+ L Sbjct: 203 FAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNL 245 >gi|294807984|ref|ZP_06766761.1| putative membrane protein [Bacteroides xylanisolvens SD CC 1b] gi|294444797|gb|EFG13487.1| putative membrane protein [Bacteroides xylanisolvens SD CC 1b] Length = 638 Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust. Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 10/200 (5%) Query: 14 RSFLM---SCLFIVFIAWVIQILQRI--NLVSSSTESLNILLKISGYLIPTVLPMVTPFC 68 +SFLM FI +++Q L R LV E ++++ + Y T++P+ P Sbjct: 19 KSFLMLFIGTFFICLFIFMMQFLWRYVDELVGKGLE-MSVMAQFFFYSALTLVPVSLPLA 77 Query: 69 FAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRST 128 + + + ELL + G S + +++P+ F L F +N++ P ++ Sbjct: 78 VLLASLITFGNFGERYELLAMKAAGISLLKIMRPLAFFVCGLVGVSFYFQNVVGPIAQAK 137 Query: 129 IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSRDT-QTHKI 186 + L + + E +F+ D +K++K N L + I +D + +I Sbjct: 138 LGTLILSMKQKSPELDIPEGVFYSEIKDYNLKVAKKNRKTGMLYDVLIYSMKDGFEKARI 197 Query: 187 YYAQSGSIDL--DRQAIILN 204 YA SG +++ D+Q + L+ Sbjct: 198 IYADSGRLEMTADKQHLWLH 217 >gi|253702060|ref|YP_003023249.1| permease YjgP/YjgQ family protein [Geobacter sp. M21] gi|251776910|gb|ACT19491.1| permease YjgP/YjgQ family protein [Geobacter sp. M21] Length = 391 Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust. Identities = 64/298 (21%), Positives = 125/298 (41%), Gaps = 16/298 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K+ YI + I FL+ + F+ + + L+ +V + + ++ YL+P Sbjct: 7 KTLYAYIFKEIPTPFLVGMVTFTFVLLMGRFLKLAEMVVEKGVPFSDVARMVAYLLPPFW 66 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + ++ ++E+ + + G S L+ P L A ++ Sbjct: 67 LFTIPMALLLAMLLAFGRLSGDSEITAMKSCGISLYGLLPPPLLFAACATLACLFVTVYA 126 Query: 122 EPKCRSTIKQLSAK-AQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 P S K+L + AQ + S ++E +F D+ + + T+ G+ + D R Sbjct: 127 VPWGNSGFKKLVVEIAQSSAGIS-IKEKIFNNAFPDMVVYTQSLDTKAQTMGGVIVHDER 185 Query: 180 DTQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQ---TES 232 D +T +A +G++ D ++ L +G +HR +++F+ Y L+ E Sbjct: 186 DPRTPTTIFASTGALVSDPKSNSMEFQLRNGSIHRAEE-KGGYRMVQFQEYNLRVSLAEG 244 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 N S K ++ L LL+P P + E+L + E+H RL +F L++I Sbjct: 245 GNKSP--RKVSEMTLDELLHP-PKGAQQK-EIL-SRGLEYHGRLALPFSCFVFTLLAI 297 >gi|299138457|ref|ZP_07031636.1| permease YjgP/YjgQ family protein [Acidobacterium sp. MP5ACTX8] gi|298599703|gb|EFI55862.1| permease YjgP/YjgQ family protein [Acidobacterium sp. MP5ACTX8] Length = 785 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 49/242 (20%), Positives = 99/242 (40%), Gaps = 13/242 (5%) Query: 1 MKSFELYILR-CIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPT 59 M+ F YILR +G + L LF FI ++ +L + L S +L++ GYL+P Sbjct: 1 MRIFTRYILREVVGYALLGGVLF-TFILFMRYLLALMELAVHGAASFADILRLIGYLLPY 59 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 L + P + L+ + ++E+ + +G ++ ++ V +A+L ++ Sbjct: 60 FLTLTIPMAVLIGILLGLSRLAADSEITAMRASGMGVLSFVRIVSIVAVLSWAVGLVNSL 119 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTL---QGIFIV 176 + P+ + + Q A+ ++ +F+ + + + P + + +F+ Sbjct: 120 YVAPRAAAALLQYEAQGASGEAAIQVQPRVFYEDFKNYVLYVQDVVPGSGAAEWKNVFLA 179 Query: 177 DSRDTQTHKIYYAQSGSI-----DLDRQAIILNDGEVH---RKSPISKDISIMKFKSYTL 228 D T I +Q + D + L+DG H +P DIS + Sbjct: 180 DLTQPATPHIITSQEALVTGTPGDPQTLRMQLSDGSRHDIAGNNPNQYDISTFASTELPI 239 Query: 229 QT 230 QT Sbjct: 240 QT 241 Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 7/87 (8%) Query: 56 LIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLF 115 LIP +L VTP C + +++R +EL + TG S + PVL +A+ LS LF Sbjct: 473 LIPFILYNVTPLCSLVAVLITFGALSRTSELTAMKATGVSLYRIATPVLLVALALSAILF 532 Query: 116 ISENIIEPKC-------RSTIKQLSAK 135 + P RS IK A+ Sbjct: 533 AFDETYLPAANRKQEALRSVIKGKPAQ 559 >gi|59801587|ref|YP_208299.1| hypothetical protein NGO1228 [Neisseria gonorrhoeae FA 1090] gi|194097861|ref|YP_002000906.1| hypothetical protein NGK_0281 [Neisseria gonorrhoeae NCCP11945] gi|239998342|ref|ZP_04718266.1| hypothetical protein Ngon3_02533 [Neisseria gonorrhoeae 35/02] gi|240014487|ref|ZP_04721400.1| hypothetical protein NgonD_07553 [Neisseria gonorrhoeae DGI18] gi|240016933|ref|ZP_04723473.1| hypothetical protein NgonFA_07151 [Neisseria gonorrhoeae FA6140] gi|240079727|ref|ZP_04724270.1| hypothetical protein NgonF_00199 [Neisseria gonorrhoeae FA19] gi|240117144|ref|ZP_04731206.1| hypothetical protein NgonPID_01570 [Neisseria gonorrhoeae PID1] gi|240121009|ref|ZP_04733971.1| hypothetical protein NgonPI_04421 [Neisseria gonorrhoeae PID24-1] gi|268602832|ref|ZP_06136999.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] gi|59718482|gb|AAW89887.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090] gi|193933151|gb|ACF28975.1| Conserved hypothetical protein [Neisseria gonorrhoeae NCCP11945] gi|268586963|gb|EEZ51639.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] gi|317163631|gb|ADV07172.1| hypothetical protein NGTW08_0198 [Neisseria gonorrhoeae TCDC-NG08107] Length = 371 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 46/223 (20%), Positives = 104/223 (46%), Gaps = 11/223 (4%) Query: 15 SFLMSCLFIVFIAWVIQILQRINLVSSSTE---SLNILLKISGYLIPTVLPMVTPFCFAM 71 SF +F+V +A V+ Q INL+ + + +++ +L + G+ + + P++ + Sbjct: 12 SFTAVGIFVVLLA-VLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTPLLLVLTAFI 70 Query: 72 ETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP----KCRS 127 T VLT R++E+ + + G + I+PV+ A+ +I + + + + P + R Sbjct: 71 STLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAILIAVMQLWVIPWAELRSRE 130 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 + L K +L+L + NL R + +Y + + ++ +F+ + I Sbjct: 131 YAEILKQKQELSLVEAGEFNNLGKR-NGRVYFVETFDTESGIMKNLFLREQDKNGGDNII 189 Query: 188 YAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 +A+ G+ L +++ + L G + +P D + + F+ L Sbjct: 190 FAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNL 232 >gi|78067267|ref|YP_370036.1| YjgP/YjgQ like transporter [Burkholderia sp. 383] gi|77968012|gb|ABB09392.1| YjgP/YjgQ like transporter [Burkholderia sp. 383] Length = 363 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 51/218 (23%), Positives = 97/218 (44%), Gaps = 18/218 (8%) Query: 48 ILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLA 107 I L + GYL V+ +VT F + VLT R++E+++ +G S LIKP+ A Sbjct: 52 IGLTVIGYL--AVMLVVTLFVSILF---VLTRWYRDSEMVVWLASGVSLTRLIKPIGVFA 106 Query: 108 ----ILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIK-IS 162 +L++ F F+ P K + A+ Q S L F + + I Sbjct: 107 TPIILLIAFFAFVGW----PWSNQQSKMIKARFQQRDEISLLAPGQFRESATNHRVFFIE 162 Query: 163 KYNPNNT-LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDIS 219 K P+ + +Q +F+ + + + + + +Q+G + + ++L DG + +P + Sbjct: 163 KMTPDQSKVQNVFVTSTENGKVN-VVVSQTGHTETRDGSRFVVLEDGRRYDGTPGQPNFK 221 Query: 220 IMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNN 257 IM+F+ Y ++ S + + + L NP +N Sbjct: 222 IMEFERYGVKITSTPVTNVPTTNSTPTPDLLRNPTNDN 259 >gi|299147702|ref|ZP_07040765.1| putative permease [Bacteroides sp. 3_1_23] gi|298513885|gb|EFI37771.1| putative permease [Bacteroides sp. 3_1_23] Length = 638 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 10/200 (5%) Query: 14 RSFLM---SCLFIVFIAWVIQILQRI--NLVSSSTESLNILLKISGYLIPTVLPMVTPFC 68 +SFLM FI +++Q L R LV E ++++ + Y T++P+ P Sbjct: 19 KSFLMLFIGTFFICLFIFMMQFLWRYVDELVGKGLE-MSVMAQFFFYSALTLVPVSLPLA 77 Query: 69 FAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRST 128 + + + ELL + G S + +++P+ F L F +N++ P ++ Sbjct: 78 VLLASLITFGNFGERYELLAMKAAGISLLKIMRPLAFFVCGLVGVSFYFQNVVGPIAQAK 137 Query: 129 IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSRDT-QTHKI 186 + L + + E +F+ D +K++K N L + I + +D + I Sbjct: 138 LGTLILSMKQKSPELDIPEGVFYSEIKDYNLKVAKKNRKTGMLYDVLIYNMKDGFENAHI 197 Query: 187 YYAQSGSIDL--DRQAIILN 204 YA SG +++ D+Q + L+ Sbjct: 198 IYADSGRLEMTADKQHLWLH 217 >gi|269140438|ref|YP_003297139.1| putative permease [Edwardsiella tarda EIB202] gi|267986099|gb|ACY85928.1| putative permease [Edwardsiella tarda EIB202] gi|304560231|gb|ADM42895.1| Predicted permease [Edwardsiella tarda FL6-60] Length = 366 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 47/240 (19%), Positives = 95/240 (39%), Gaps = 23/240 (9%) Query: 47 NILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFL 106 N++ + G IP + ++ P + L + +E+ ++ G S+ L+K + L Sbjct: 46 NLVFSLLGLGIPEMAQLILPLSLFLGLLMTLGRLYTESEITVMHACGLSKAVLVKAAMAL 105 Query: 107 AILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP 166 A + ++ + P ++ A+A+ + L E F D Y+ Sbjct: 106 AFITGALALVNAFWLSPWSSLHSDEVMAEARANPGLASLAEGQFQPSQDGNYVLFVGNVK 165 Query: 167 NNTLQGIFIVDSRDTQTHK--IYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIM 221 + +F+ R + + + + A SG + Q ++L+ G + + + +D I Sbjct: 166 DKKFHNVFLAQLRPSGSQRPSVVVADSGHLVEMKDGAQKVVLDSGTRYEGTAMLRDFRIT 225 Query: 222 KFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLET----YRSEFHKRLT 277 F Y S I+ + S +L+PN + L + +R+EFH RLT Sbjct: 226 DFVDY---------SAII-----GHKSAMLDPNNADQASMSALWHSQEPSFRAEFHWRLT 271 >gi|253583478|ref|ZP_04860676.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725] gi|251834050|gb|EES62613.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725] Length = 362 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 48/224 (21%), Positives = 100/224 (44%), Gaps = 12/224 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVS----SSTESLNILLKISGYL 56 +K + YI + +SF +S + V I V Q+ + I VS S+ ES+ +L + Sbjct: 3 IKIIDRYISKNFIKSFFLSLIAFVGIFLVSQLFKVIRYVSDGRFSADESIVYILT----M 58 Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 IP +L V P + + ++SM N E++ + G S ++ +F++ +++I +F+ Sbjct: 59 IPKILIDVAPLAVLLGSLMTVSSMASNLEVISLKTAGISFKRIVLFPIFISAVIAIIVFL 118 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKI-SKYNPNNTL-QGIF 174 + + P +++ + N F R ++ Y+ + K N + I Sbjct: 119 INDSLYPYSVRKNREIKDGGNTRREMPVEKRNAFLRGENSNYVYLMGKINRETGFGENIE 178 Query: 175 IVDSRD--TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK 216 IVD + + +I A+ G + ++ +L D ++ + K Sbjct: 179 IVDLNEEFNKVERIITAKEGRYNFTKKVWVLKDANIYNGKELKK 222 >gi|315922632|ref|ZP_07918872.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313696507|gb|EFS33342.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 632 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 10/200 (5%) Query: 14 RSFLM---SCLFIVFIAWVIQILQRI--NLVSSSTESLNILLKISGYLIPTVLPMVTPFC 68 +SFLM FI +++Q L R LV E ++++ + Y T++P+ P Sbjct: 13 KSFLMLFIGTFFICLFIFMMQFLWRYVDELVGKGLE-MSVMAQFFFYSALTLVPVSLPLA 71 Query: 69 FAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRST 128 + + + ELL + G S + +++P+ F L F +N++ P ++ Sbjct: 72 VLLASLITFGNFGERYELLAMKAAGISLLKIMRPLAFFVCGLVGVSFYFQNVVGPIAQAK 131 Query: 129 IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSRDT-QTHKI 186 + L + + E +F+ D +K++K N L + I + +D + I Sbjct: 132 LGTLILSMKQKSPELDIPEGVFYSEIKDYNLKVAKKNRKTGMLYDVLIYNMKDGFENAHI 191 Query: 187 YYAQSGSIDL--DRQAIILN 204 YA SG +++ D+Q + L+ Sbjct: 192 IYADSGRLEMTADKQHLWLH 211 >gi|293369978|ref|ZP_06616545.1| putative membrane protein [Bacteroides ovatus SD CMC 3f] gi|292634896|gb|EFF53418.1| putative membrane protein [Bacteroides ovatus SD CMC 3f] Length = 638 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 10/200 (5%) Query: 14 RSFLM---SCLFIVFIAWVIQILQRI--NLVSSSTESLNILLKISGYLIPTVLPMVTPFC 68 +SFLM FI +++Q L R LV E ++++ + Y T++P+ P Sbjct: 19 KSFLMLFIGTFFICLFIFMMQFLWRYVDELVGKGLE-MSVMAQFFFYSALTLVPVSLPLA 77 Query: 69 FAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRST 128 + + + ELL + G S + +++P+ F L F +N++ P ++ Sbjct: 78 VLLASLITFGNFGERYELLAMKAAGISLLKIMRPLAFFVCGLIGVSFYFQNVVGPIAQAK 137 Query: 129 IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSRDT-QTHKI 186 + L + + E +F+ D +K++K N L + I +D + +I Sbjct: 138 LGTLILSMKQKSPELDIPEGVFYSEIKDYNLKVAKKNRKTGMLYDVLIYSMKDGFEKARI 197 Query: 187 YYAQSGSIDL--DRQAIILN 204 YA SG +++ D+Q + L+ Sbjct: 198 IYADSGRLEMTADKQHLWLH 217 >gi|189500558|ref|YP_001960028.1| permease YjgP/YjgQ family protein [Chlorobium phaeobacteroides BS1] gi|189495999|gb|ACE04547.1| permease YjgP/YjgQ family protein [Chlorobium phaeobacteroides BS1] Length = 441 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 57/237 (24%), Positives = 102/237 (43%), Gaps = 16/237 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YIL+ FL S + I+FI + + + + + ++ ++ + + Sbjct: 1 MKILYRYILKEHIGPFLFSFITILFILTLQFVTRFFDRFAGKDLGFIVIAELISLQVAWM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + T ++ ++E+ ++ G S L+ PVL A LL+ L NI Sbjct: 61 VVLALPMAVLVATLIAFGNLANSSEMTVMRAGGVSLYRLVFPVLVAAALLTGILERFNNI 120 Query: 121 IEPKCRSTIKQL-----SAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIF 174 + P+ K L AK LT EN F L D I + + + NTL+GI Sbjct: 121 VLPEANYQAKVLLRDITRAKPTFGLT-----ENAFSGLVDGYSILVREEGSDPNTLEGIT 175 Query: 175 IVDSRDTQTHKIYYAQSGSIDL--DRQAIILN--DGEVHRKSPISK-DISIMKFKSY 226 I + + + A+SG I D +IL +G++H+ K + +M F+ + Sbjct: 176 IYERGSNEDKAVITAESGHIAFTADYHYLILTLFNGQMHKMQGQGKEEYRVMTFEKH 232 >gi|298483137|ref|ZP_07001317.1| permease [Bacteroides sp. D22] gi|298270654|gb|EFI12235.1| permease [Bacteroides sp. D22] Length = 632 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 10/200 (5%) Query: 14 RSFLM---SCLFIVFIAWVIQILQRI--NLVSSSTESLNILLKISGYLIPTVLPMVTPFC 68 +SFLM FI +++Q L R LV E ++++ + Y T++P+ P Sbjct: 13 KSFLMLFIGTFFICLFIFMMQFLWRYVDELVGKGLE-MSVMAQFFFYSALTLVPVSLPLA 71 Query: 69 FAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRST 128 + + + ELL + G S + +++P+ F L F +N++ P ++ Sbjct: 72 VLLASLITFGNFGERYELLAMKAAGISLLKIMRPLAFFVCGLIGVSFYFQNVVGPIAQAK 131 Query: 129 IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSRDT-QTHKI 186 + L + + E +F+ D +K++K N L + I +D + +I Sbjct: 132 LGTLILSMKQKSPELDIPEGVFYSEIKDYNLKVAKKNRKTGMLYDVLIYSMKDGFEKARI 191 Query: 187 YYAQSGSIDL--DRQAIILN 204 YA SG +++ D+Q + L+ Sbjct: 192 IYADSGRLEMTADKQHLWLH 211 >gi|283833700|ref|ZP_06353441.1| permease YjgP/YjgQ [Citrobacter youngae ATCC 29220] gi|291071386|gb|EFE09495.1| permease YjgP/YjgQ [Citrobacter youngae ATCC 29220] Length = 356 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 54/261 (20%), Positives = 101/261 (38%), Gaps = 17/261 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ E YI+ + R + F++FI + + + ++ T +L +L I Y + Sbjct: 1 MRLIERYIMFEVSRLVAIIVGFLIFIFAIYSAQRYLTDAANGTLALTAVLAIVFYKVIIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L ++ +E+ + G+S + L K V++ AI L I + + Sbjct: 61 LEMLLPVGLYVSVGIALGQLHAESEITALLAAGSSPLRLYKTVMYFAIPLGILVTLLSMF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P I +L ++Q L S+L F D I + +P+ ++ + Sbjct: 121 GRPWAYMQIYRLEQQSQSELDISHLRARKFNVNDHGHMILAATISPDTGHLTDMLIYTPS 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 T ++ A G I SP++ +++ SY L + + Sbjct: 181 ENTSSLFRAHCGDIT--------------NPSPLTPSVALHSGTSYRLDHHNGQGDNGQI 226 Query: 241 KANDQNLSFLLNPNPNNPNYR 261 Q L+ L P NP R Sbjct: 227 F---QRLNIQLKPLMQNPITR 244 >gi|261392198|emb|CAX49712.1| conserved hypothetical integral membrane protein [Neisseria meningitidis 8013] Length = 371 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 45/223 (20%), Positives = 104/223 (46%), Gaps = 11/223 (4%) Query: 15 SFLMSCLFIVFIAWVIQILQRINLVSSSTE---SLNILLKISGYLIPTVLPMVTPFCFAM 71 SF +F+V +A V+ Q INL+ + + +++ +L + G+ I + P++ + Sbjct: 12 SFTAVGIFVVLLA-VLVSTQAINLLGRAADGRVAIDAVLALVGFWIIGMTPLLLVLTAFI 70 Query: 72 ETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP----KCRS 127 T VLT R++E+ + + G + I+PV+ A+ ++ + + + + P + R Sbjct: 71 STLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWVIPWAELRSRE 130 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 + L K +L+L + E N + + +Y + + ++ +F+ + I Sbjct: 131 YAEILKQKQELSLVEAG-EFNSLGKRNGRVYFVETFDTESGIMKNLFLREQDKNGGDNII 189 Query: 188 YAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 +A+ G+ L +++ + L G + +P D + + F+ L Sbjct: 190 FAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNL 232 >gi|145588807|ref|YP_001155404.1| permease YjgP/YjgQ family protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047213|gb|ABP33840.1| permease YjgP/YjgQ family protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 371 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 17/221 (7%) Query: 54 GYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIF 113 GYL VL V+ F T VL +++E+++ +G S LI+P+L A L I Sbjct: 58 GYL--AVLLTVSLFV---ATLIVLVRWYKDSEMIVWFASGLSISNLIRPILQFATPLIII 112 Query: 114 LFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLF---FRLDDDLYIKISKYNPNNTL 170 + + + P +S + Q S + F R + +I+ + N + Sbjct: 113 IALLALFVWPWANRESTLISQRFQQRDDVSMVSSGQFRESARAERVFFIEELDVD-KNEV 171 Query: 171 QGIFIVDSRDTQTHKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 + IF+ DS++ + + A +G I + ++++L++G + P D I++F YT Sbjct: 172 KNIFVADSKNGRVS-VAVASAGYIQNSEDGEKSVVLHNGRRYEGQPTQPDFRILEFTDYT 230 Query: 228 LQTESANSSTIVLKANDQNLSFLLN---PNPNNPNYRPELL 265 + S + + ++ +S LLN P NPN R ELL Sbjct: 231 TKIRSKEALAPPPRDREKTISELLNETEPTTINPN-RAELL 270 >gi|113971161|ref|YP_734954.1| permease YjgP/YjgQ family protein [Shewanella sp. MR-4] gi|117921444|ref|YP_870636.1| permease YjgP/YjgQ family protein [Shewanella sp. ANA-3] gi|113885845|gb|ABI39897.1| permease YjgP/YjgQ family protein [Shewanella sp. MR-4] gi|117613776|gb|ABK49230.1| permease YjgP/YjgQ family protein [Shewanella sp. ANA-3] Length = 370 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 65/292 (22%), Positives = 118/292 (40%), Gaps = 31/292 (10%) Query: 80 MNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLA 139 M E++I+ G S + + L LA++ +F + P Q+ KAQ Sbjct: 79 MYAENEMVILHGVGVSEWYVTRVTLILAVINMLFTGYLSLYVAPWAEEQQNQVLEKAQSE 138 Query: 140 LTFSYLEENLFFRLDDDLYIK-ISKYNPNNTLQGIFIVDSRDTQTH----KIYYAQSGSI 194 + L + F + + + + +N L +F+ D + A+ G + Sbjct: 139 AGLAALVQGRFQASPNGRAVLFVERIGKDNDLDKVFVAQLPDPNDEIGLTNVVVAKGGRV 198 Query: 195 DLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLL 251 D+ Q + LNDG ++ SP KD +++F Y +Q + K + L+ L+ Sbjct: 199 LEDQNGSQQLQLNDGVRYQGSPQQKDYQMIEFGGYKMQIKEQQVDERRRKLSALPLTELM 258 Query: 252 NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD-KRALVRQRK--KIHPI 308 PE + +EFH RL P+ +++++A R VRQ K K+ P Sbjct: 259 KVEG------PEAV----AEFHWRLA---IPLAIPIMTLIAVPLARVNVRQGKFAKMLPA 305 Query: 309 FISLSISFGVFWGFSYIIHKIEQN---PYYIPILYLFLFCISSIFLLMIKKK 357 + + G F G K Q+ P Y+ + ++ L + LL+ K + Sbjct: 306 VL---LYLGYF-GLMVAGRKALQDGVIPQYLGMWWIHLSALIMGILLLGKDR 353 >gi|240127075|ref|ZP_04739736.1| hypothetical protein NgonS_00198 [Neisseria gonorrhoeae SK-93-1035] gi|268685430|ref|ZP_06152292.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035] gi|268625714|gb|EEZ58114.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035] Length = 371 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 53/260 (20%), Positives = 119/260 (45%), Gaps = 12/260 (4%) Query: 15 SFLMSCLFIVFIAWVIQILQRINLVSSSTE---SLNILLKISGYLIPTVLPMVTPFCFAM 71 SF +F+V +A V+ Q INL+ + + +++ +L + G+ + + P++ + Sbjct: 12 SFTAVGIFVVLLA-VLVSTQAINLLDRAADGRVAIDAVLALVGFWVIGMTPLLLVLTAFI 70 Query: 72 ETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP----KCRS 127 T VLT R++E+ + + G + I+PV+ A+ +I + + + + P + R Sbjct: 71 STLTVLTCYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAILIAVMQLWVIPWAELRSRE 130 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 + L K +L+L + NL R + +Y + + ++ +F+ + I Sbjct: 131 YAEILKQKQELSLVEAGEFNNLGKR-NGRVYFVETFDTESGIMKNLFLREQDKNGGDNII 189 Query: 188 YAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQ 245 +A+ G+ L +++ + L G + +P D + + F+ L S I ++ + Sbjct: 190 FAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLII-STTPKLIDPVSHRR 248 Query: 246 NLSFLLNPNPNNPNYRPELL 265 +S +NP ++ EL+ Sbjct: 249 TISTAQLIGSSNPQHQAELM 268 >gi|268683689|ref|ZP_06150551.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679] gi|268623973|gb|EEZ56373.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679] Length = 384 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 46/223 (20%), Positives = 104/223 (46%), Gaps = 11/223 (4%) Query: 15 SFLMSCLFIVFIAWVIQILQRINLVSSSTE---SLNILLKISGYLIPTVLPMVTPFCFAM 71 SF +F+V +A V+ Q INL+ + + +++ +L + G+ + + P++ + Sbjct: 25 SFTAVGIFVVLLA-VLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTPLLLVLTAFI 83 Query: 72 ETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP----KCRS 127 T VLT R++E+ + + G + I+PV+ A+ +I + + + + P + R Sbjct: 84 STLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAILIAVMQLWVIPWAELRNRE 143 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 + L K +L+L + NL R + +Y + + ++ +F+ + I Sbjct: 144 YAEILKQKQELSLVEAGEFNNLGKR-NGRVYFVETFDTESGIMKNLFLREQDKNGGDNII 202 Query: 188 YAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 +A+ G+ L +++ + L G + +P D + + F+ L Sbjct: 203 FAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNL 245 >gi|146329237|ref|YP_001210036.1| hypothetical protein DNO_1152 [Dichelobacter nodosus VCS1703A] gi|146232707|gb|ABQ13685.1| conserved hypothetical membrane protein [Dichelobacter nodosus VCS1703A] Length = 349 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 57/261 (21%), Positives = 108/261 (41%), Gaps = 35/261 (13%) Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P F + + L+ + + E+ + G S+ L++P+L+L + L++ L I+ + P Sbjct: 68 PVAFILASVMTLSRLYGDCEINALFAGGCSKKHLMQPILYLVLPLAVILVINTLYLLPHV 127 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLD--DDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 QL A+++ +S+ N F L+ + LY + NN Q FI+ D Sbjct: 128 FERWDQLMAQSRQEALYSFFTPNQFQHLNAHNTLY---TGDKINNGFQP-FIIIQNDNNE 183 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKS------PISKDISIMKFKSYTLQTESANSS- 236 + + +++ G I ++ L+ + +R + P + S S L ++ Sbjct: 184 YSMLWSKRGEIQKNQPEHFLHLTQGNRAAWRDDFQPQNCLFSQFAHGSLHLSQSPPSAQQ 243 Query: 237 ---TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 +I A +Q+L+ +R+EF KRL L VIF + A Sbjct: 244 RLRSIATGALNQSLA-------------------HRAEFQKRLNPALAVVIFSFAVPLLA 284 Query: 294 DKRALVRQRKKIHPIFISLSI 314 R + +++ P FI I Sbjct: 285 HTRPRQGRYQRLLPAFILFGI 305 >gi|308272621|emb|CBX29225.1| hypothetical protein N47_J02060 [uncultured Desulfobacterium sp.] Length = 409 Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust. Identities = 53/235 (22%), Positives = 101/235 (42%), Gaps = 7/235 (2%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y+ + I F ++ LF F+ + +IL NLV + SL + + Y+IP L V P Sbjct: 25 YLFKEILSPFAINTLFFTFLFLMAKILFITNLVVNYNMSLPKIGLMLLYIIPNFLVFVIP 84 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 M + + E++ + G S L+ PVL + I F+ P R Sbjct: 85 MSVMMAILLTFLRFSSDNEIIALKTGGISIYGLLPPVLIFCFIGCILTFLISLYAIPWGR 144 Query: 127 STIKQLSAK-AQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSRDTQTH 184 +I++L+ + AQ L+E F D+ + ++K + + L +F+ D R Sbjct: 145 LSIEKLTMEIAQSNFEIG-LKERTFNDNFKDIMLYVNKVDLKKDELIDVFVEDGRSEDMA 203 Query: 185 KIYYAQSGSIDLDRQAII----LNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 A G + + + L DG +++ + +K ++ + F +Y + + N+ Sbjct: 204 STIIAPKGVLLFEENRLSFRLRLYDGVINQVNTKNKSVNSIGFDTYDINLDLKNA 258 >gi|187250532|ref|YP_001875014.1| permease YjgP/YjgQ family protein [Elusimicrobium minutum Pei191] gi|186970692|gb|ACC97677.1| Permease YjgP/YjgQ family protein [Elusimicrobium minutum Pei191] Length = 364 Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust. Identities = 57/222 (25%), Positives = 101/222 (45%), Gaps = 15/222 (6%) Query: 15 SFLMSCLFI-VFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMET 73 +F + LF+ VFI +++ ++ NL + + + K L+P V + P F + Sbjct: 16 TFFLGALFVLVFIFFMMHFIKLFNLAMTFGADMLWVFKTLVKLVPDVFSLCAPMAFQLAV 75 Query: 74 TNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLS 133 L +M+ N E++ + G S + KP+ A+ L + +F N I PK + Sbjct: 76 LLTLGNMSENGEIIALRAAGFSFKEITKPLFIFALFLFLVIFSFTNWITPKNTKSFLDAR 135 Query: 134 AKAQLALTFSYLEENLFFRLDD-DLYIKISKYNPN-NTLQGIFIVDSRDTQ--THKIYYA 189 + + LE F + D LY++ +P N + + +++ D+ T KI A Sbjct: 136 NNVRGRIGKVILEPKTFMEIGDWSLYME--SLDPKTNLMSQVRLLNKNDSANYTTKI-NA 192 Query: 190 QSGSIDL--DRQAIILNDGEVHRKSPISKD---ISIMKFKSY 226 SG +++ D + L DG++ R S S+D I FKSY Sbjct: 193 LSGIVNVTSDYVGLKLFDGQMQRVS--SEDPSKIMAANFKSY 232 >gi|240113703|ref|ZP_04728193.1| hypothetical protein NgonM_09082 [Neisseria gonorrhoeae MS11] gi|268599771|ref|ZP_06133938.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11] gi|268583902|gb|EEZ48578.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11] Length = 396 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 46/223 (20%), Positives = 105/223 (47%), Gaps = 11/223 (4%) Query: 15 SFLMSCLFIVFIAWVIQILQRINLVSSSTE---SLNILLKISGYLIPTVLPMVTPFCFAM 71 SF +F+V +A V+ Q INL+ + + +++ +L + G+ + + P++ + Sbjct: 37 SFTAVGIFVVLLA-VLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTPLLLVLTAFI 95 Query: 72 ETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP----KCRS 127 T VLT R++E+ + + G + I+PV+ A+ +I + + + + P + R Sbjct: 96 STLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAILIAVMQLWVIPWAELRNRE 155 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 + L K +L+L + NL R + +Y + + ++ +F+ + I Sbjct: 156 YAEILKQKQELSLVEAGEFNNLGKR-NGRVYFVETFDTESGIMKNLFLREQDKNGGDNII 214 Query: 188 YAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 +A+ G S++ +++ + L G + +P D + + F+ L Sbjct: 215 FAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNL 257 >gi|78222463|ref|YP_384210.1| permease YjgP/YjgQ [Geobacter metallireducens GS-15] gi|78193718|gb|ABB31485.1| permease YjgP/YjgQ [Geobacter metallireducens GS-15] Length = 418 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 57/297 (19%), Positives = 120/297 (40%), Gaps = 22/297 (7%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 YI + F++ F+ + ++L+ +V + + ++ Y++P+ L + P Sbjct: 37 YIFKETAVPFVLGMAVFTFVLLMGRLLKLAEMVFAKGVPFLDVCRLILYMLPSFLLVAIP 96 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 F + ++ ++E+ + G +L+ PV A+L + P Sbjct: 97 MAFLLAVLLSFGRLSADSEVTAMKAGGVGLGSLLTPVFTFAVLAYLVTTFITVFALPWGN 156 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDD--DLYIKISKYN-PNNTLQGIFIVDSRDTQT 183 ++ K+ + + + ++E +F +DD L + I Y+ ++ + GI I D R+ Sbjct: 157 TSFKRFLYEVIESRAATTIKEKVF--IDDFPGLVVYIDDYDQTSHQISGILIHDERNPDE 214 Query: 184 HKIYYAQSGSIDLDRQA----IILNDGEVHRK-SPISKDISIMKFKSYTLQTE-SANSST 237 +A +G I + + L +G +HR P +++F+SY L + N+ Sbjct: 215 PMTIFASTGIIAAAPEEKNVRLHLVNGSIHRGIDP--GGYRLVEFRSYDLHVDLRQNAKK 272 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRS----EFHKRLTQWLFPVIFGLISI 290 D L L+ N N E +R E HKR ++F ++ + Sbjct: 273 NQFDEQDMTLKQLIASRGNRQNN-----EKFRRDVSIELHKRFALPFACIVFAMVGV 324 >gi|119471262|ref|ZP_01613765.1| hypothetical protein ATW7_11360 [Alteromonadales bacterium TW-7] gi|119445728|gb|EAW27011.1| hypothetical protein ATW7_11360 [Alteromonadales bacterium TW-7] Length = 354 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 44/213 (20%), Positives = 95/213 (44%), Gaps = 14/213 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ + Y+ R I ++ + L +V I+ +I+ ++++ V + L + + Y IP Sbjct: 1 MKTLDWYLGRSILQTTGFALLVLVGISTLIKFIEQLKSVGRGSYDLITAMLYTLYSIPGD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L ++ N+EL+++ G SR+ +I V+ A+ ++I + Sbjct: 61 LVVFFPMAALIGGLTGLGALASNSELVVMQAAGMSRLQIIGSVMKTAMFMAICMMALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + K++ +A ++ ++ + D + +I I + + L G+ Sbjct: 121 GAPEAQLRAKEMRNQAIHGGDVFSAQKGVWAK-DGNNFINIEDVDESGKLNGL------- 172 Query: 181 TQTHKIYYAQS---GSIDLDRQAIILNDGEVHR 210 H Y+ S I ++AI DG + R Sbjct: 173 ---HMYYFDSSLELTQITKAKEAISRKDGWLLR 202 >gi|240122360|ref|ZP_04735316.1| hypothetical protein NgonP_00185 [Neisseria gonorrhoeae PID332] gi|240125094|ref|ZP_04737980.1| hypothetical protein NgonSK_02547 [Neisseria gonorrhoeae SK-92-679] gi|254494457|ref|ZP_05107628.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291] gi|268680947|ref|ZP_06147809.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332] gi|226513497|gb|EEH62842.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291] gi|268621231|gb|EEZ53631.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332] Length = 371 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 46/223 (20%), Positives = 104/223 (46%), Gaps = 11/223 (4%) Query: 15 SFLMSCLFIVFIAWVIQILQRINLVSSSTE---SLNILLKISGYLIPTVLPMVTPFCFAM 71 SF +F+V +A V+ Q INL+ + + +++ +L + G+ + + P++ + Sbjct: 12 SFTAVGIFVVLLA-VLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTPLLLVLTAFI 70 Query: 72 ETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP----KCRS 127 T VLT R++E+ + + G + I+PV+ A+ +I + + + + P + R Sbjct: 71 STLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAILIAVMQLWVIPWAELRNRE 130 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 + L K +L+L + NL R + +Y + + ++ +F+ + I Sbjct: 131 YAEILKQKQELSLVEAGEFNNLGKR-NGRVYFVETFDTESGIMKNLFLREQDKNGGDNII 189 Query: 188 YAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 +A+ G+ L +++ + L G + +P D + + F+ L Sbjct: 190 FAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNL 232 >gi|124006213|ref|ZP_01691048.1| putative permease, YjgP/YjgQ family [Microscilla marina ATCC 23134] gi|123988137|gb|EAY27795.1| putative permease, YjgP/YjgQ family [Microscilla marina ATCC 23134] Length = 491 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 42/196 (21%), Positives = 86/196 (43%), Gaps = 2/196 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + +L+ F+++ +VFI V Q+LQ ++ S + ++ Y + Sbjct: 1 MKKIDKLVLQSFFGPFILTLSVLVFIFLVQQLLQYLDEFMGKGLSYLVFAELVFYFSLHI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +PMV P + + ++ + EL + ++G S I ++ P+ + + ++ F N Sbjct: 61 IPMVLPLATLLASLITFGNLGEHHELTAMKSSGISLIRVLTPLFMVVVCFAVVSFWFNNS 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS-KYNPNNTLQGIFIVDSR 179 I PK L + ++E F+ + IK++ K+ TL+ + I D Sbjct: 121 IVPKANLDAYSLLYDIRQTKPALDIKEGAFYGGIPNYSIKVNHKFPDGRTLKDVIIYDHS 180 Query: 180 DTQTHK-IYYAQSGSI 194 + +K + A SG + Sbjct: 181 GRRGNKQVILADSGQM 196 >gi|121635227|ref|YP_975472.1| hypothetical protein NMC1490 [Neisseria meningitidis FAM18] gi|254805325|ref|YP_003083546.1| putative permease [Neisseria meningitidis alpha14] gi|120866933|emb|CAM10693.1| conserved integral membrane hypothetical protein [Neisseria meningitidis FAM18] gi|254668867|emb|CBA06967.1| putative permease [Neisseria meningitidis alpha14] gi|254669825|emb|CBA04193.1| conserved hypothetical protein [Neisseria meningitidis alpha153] gi|254672903|emb|CBA07222.1| conserved hypothetical protein [Neisseria meningitidis alpha275] gi|325138630|gb|EGC61189.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis ES14902] gi|325142745|gb|EGC65120.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis 961-5945] gi|325198680|gb|ADY94136.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis G2136] Length = 371 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 44/223 (19%), Positives = 104/223 (46%), Gaps = 11/223 (4%) Query: 15 SFLMSCLFIVFIAWVIQILQRINLVSSSTE---SLNILLKISGYLIPTVLPMVTPFCFAM 71 SF +F+V +A V+ Q INL+ + + +++ +L + G+ + + P++ + Sbjct: 12 SFTAVGIFVVLLA-VLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTPLLLVLTAFI 70 Query: 72 ETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP----KCRS 127 T VLT R++E+ + + G + I+PV+ A+ ++ + + + + P + R Sbjct: 71 STLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWVIPWAELRSRE 130 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 + L K +L+L + E N + + +Y + + ++ +F+ + I Sbjct: 131 YAEILKQKQELSLVEAG-EFNSLGKRNGRVYFVETFDTESGIMKNLFLREQDKNGGDNII 189 Query: 188 YAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 +A+ G+ L +++ + L G + +P D + + F+ L Sbjct: 190 FAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNL 232 >gi|126696921|ref|YP_001091807.1| putative permease [Prochlorococcus marinus str. MIT 9301] gi|126543964|gb|ABO18206.1| possible permease [Prochlorococcus marinus str. MIT 9301] Length = 401 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 40/195 (20%), Positives = 85/195 (43%), Gaps = 18/195 (9%) Query: 50 LKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAIL 109 LK+ + +P+ L + P + T ++ N+ELL + + G +I P + L+I Sbjct: 73 LKVLFFSLPSFLVLSFPMAVLLSTLLAYGKLSSNSELLALKSLGIKTSRIISPAIALSIF 132 Query: 110 LSIFLF-ISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFF-----RLDDD------- 156 ++ F ++N++ + K L A + + ++N+ F R+ Sbjct: 133 MTGLTFYFNDNLVPASNKLAEKTLRAGIGSSFSAEQRKDNIMFSRYGSRISSSNKKPTKT 192 Query: 157 ----LYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKS 212 +I + + NN ++G+ ++D +I A++G D + I +DG + Sbjct: 193 NTFLTHIFYASWYENNIMEGVTVLDFSREDFQQILKAKNGVFDKKSSSWIFSDGNIVSID 252 Query: 213 PISKDISIMKFKSYT 227 P + +I +F+ YT Sbjct: 253 PSGQTTNI-QFQEYT 266 >gi|313200016|ref|YP_004038674.1| permease [Methylovorus sp. MP688] gi|312439332|gb|ADQ83438.1| permease YjgP/YjgQ family protein [Methylovorus sp. MP688] Length = 356 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 39/196 (19%), Positives = 87/196 (44%), Gaps = 2/196 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+ + I S ++ + ++ + ++Q + + T LN +L P Sbjct: 1 MKLLNRYLTQEIVSSIMLIMVALLAMFSFFDLIQELESIGKGTYGLNKVLVFVLLSAPGH 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + T L ++R++EL+I+ +G S T+ + +L + ++ ++ F Sbjct: 61 VYEVVPVAVLVGTMYALGQLSRHSELIILRVSGISIATIARSLLKVGLIFAVITFFVGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P T ++L +A ++ L+ + D ++ + + P++ L I I + D Sbjct: 121 VTPYSEKTAQRLRIQATDSVVAQDFRSGLWVK-DGRSFVNVEEVMPDSGLMNIHIYEFDD 179 Query: 181 T-QTHKIYYAQSGSID 195 + I A++G D Sbjct: 180 SFHLRTISDAKTGRFD 195 >gi|158337152|ref|YP_001518327.1| permease YjgP/YjgQ [Acaryochloris marina MBIC11017] gi|158307393|gb|ABW29010.1| permease YjgP/YjgQ, putative [Acaryochloris marina MBIC11017] Length = 390 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 55/266 (20%), Positives = 103/266 (38%), Gaps = 24/266 (9%) Query: 39 VSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRIT 98 VS + + I L I +P + + P + L+ + + ELL + + G Sbjct: 52 VSEARLPIAIALSILTLQLPYFVSLAIPMSVLLACLLTLSRLQSDGELLALQSAGLHLNR 111 Query: 99 LIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFF------- 151 LI L ++L +F+F + P ++ L + A FS ++ + Sbjct: 112 LIGSCLGFSLLACLFMFGLTESLVPVSQAHSHHLLRQTLQAGQFSLQGRHIVYPDIGPNQ 171 Query: 152 RLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRK 211 L Y + + TL GI ++D ++ AQS + + +R I DG ++ Sbjct: 172 ELRRLFYAQTGQ---GQTLSGITVIDWTLPNNQQVLIAQSATWNAERNIWIFKDGSIYAI 228 Query: 212 SPISKDISIMKFKSYTLQ-------TESA-NSSTIVLKANDQNLSFLLNPNPNNPNYRPE 263 + I++F LQ T+S N + + L + Q L+ L RP Sbjct: 229 GTDGAEKHIIEFSKQELQLPPQLSLTDSDINPNGVTLAQSQQLLTKLRQTG------RPT 282 Query: 264 LLETYRSEFHKRLTQWLFPVIFGLIS 289 + + H+++ +IFGL+ Sbjct: 283 QIRALAIQIHRKIALPFTVIIFGLVG 308 >gi|294055919|ref|YP_003549577.1| permease YjgP/YjgQ family protein [Coraliomargarita akajimensis DSM 45221] gi|293615252|gb|ADE55407.1| permease YjgP/YjgQ family protein [Coraliomargarita akajimensis DSM 45221] Length = 382 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 38/196 (19%), Positives = 81/196 (41%), Gaps = 3/196 (1%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRIN-LVSSSTESLNILLKISGYLIPTVLPMVT 65 ++ + I + L++ +F+ ++ + LV++ +K+ G LIP V Sbjct: 8 HVFKEIAVAILLAMGLFIFVLLTGNAIRDVAALVAAGKLDAMTFIKLMGLLIPYVAAYAL 67 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P T L ++ E+ + + G S + PV F+A + + + P+ Sbjct: 68 PLGILTGTLMALGRLSSQREITAMKSAGLSLYQIASPVFFIAFIAMVLSLVVNLDFAPRA 127 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD-TQTH 184 +S K++ A ++EE F I + ++ ++ ++ + D Q Sbjct: 128 KSAFKEMLASTISENPVKFIEEKKFITGFPGYVIYMGDHD-GGLMKDFWVWELDDRKQVT 186 Query: 185 KIYYAQSGSIDLDRQA 200 + A+SG +D DR+A Sbjct: 187 RFVRAESGELDYDREA 202 >gi|15677420|ref|NP_274576.1| hypothetical protein NMB1570 [Neisseria meningitidis MC58] gi|304387021|ref|ZP_07369276.1| YjgP/YjgQ family permease [Neisseria meningitidis ATCC 13091] gi|7226817|gb|AAF41923.1| conserved hypothetical protein [Neisseria meningitidis MC58] gi|304338893|gb|EFM04992.1| YjgP/YjgQ family permease [Neisseria meningitidis ATCC 13091] gi|316983818|gb|EFV62798.1| conserved hypothetical protein [Neisseria meningitidis H44/76] gi|325140780|gb|EGC63294.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis CU385] gi|325199831|gb|ADY95286.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis H44/76] Length = 371 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 44/223 (19%), Positives = 104/223 (46%), Gaps = 11/223 (4%) Query: 15 SFLMSCLFIVFIAWVIQILQRINLVSSSTE---SLNILLKISGYLIPTVLPMVTPFCFAM 71 SF +F+V +A V+ Q INL+ + + +++ +L + G+ + + P++ + Sbjct: 12 SFTAVGIFVVLLA-VLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTPLLLVLTAFI 70 Query: 72 ETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP----KCRS 127 T VLT R++E+ + + G + I+PV+ A+ ++ + + + + P + R Sbjct: 71 STLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWVIPWAELRSRE 130 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 + L K +L+L + E N + + +Y + + ++ +F+ + I Sbjct: 131 YAEILKQKQELSLVEAG-EFNSLGKRNGRVYFVETFDTESGIMKNLFLREQDKNGGDNII 189 Query: 188 YAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 +A+ G+ L +++ + L G + +P D + + F+ L Sbjct: 190 FAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNL 232 >gi|197105522|ref|YP_002130899.1| hypothetical protein PHZ_c2059 [Phenylobacterium zucineum HLK1] gi|196478942|gb|ACG78470.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1] Length = 386 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 55/235 (23%), Positives = 96/235 (40%), Gaps = 23/235 (9%) Query: 40 SSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITL 99 S S+E + +++ L+P + + P F + V+ MN+ +E+ + G S L Sbjct: 30 SESSERFTFVAQLAVNLVPHYVGLTLPAAFFIALIIVVNRMNQASEIDALLAAGVSLTRL 89 Query: 100 IKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI 159 P L LA +LS I ++P R + + AQ A + E +DDL + Sbjct: 90 AAPYLVLAGVLSFLTLIVFGALQPYSRYAYRAVLHAAQNAGWSGQVPEGTIIAPNDDLIM 149 Query: 160 KISKYN-PNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQA------IILNDGEV---- 208 + + L +FI R T + +G +L R A ++L DG+ Sbjct: 150 TTDQADAAGQRLTRVFI--RRLTPEGREEVTTAGVAELRRTADGKNVTLMLKDGQQLRFN 207 Query: 209 HRKSPISKDISIMKFKSYTLQTE-SANSSTIVLKANDQ---NLSFLLNPNPNNPN 259 R P ++ F+ +T+Q S + + + D+ NL F L N+P Sbjct: 208 RRGEP-----ELLSFEDFTMQLPLSGPARLLRARGGDERELNL-FELAKKANDPQ 256 >gi|325132745|gb|EGC55428.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M6190] Length = 396 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 44/223 (19%), Positives = 105/223 (47%), Gaps = 11/223 (4%) Query: 15 SFLMSCLFIVFIAWVIQILQRINLVSSSTE---SLNILLKISGYLIPTVLPMVTPFCFAM 71 SF +F+V +A V+ Q INL+ + + +++ +L + G+ + + P++ + Sbjct: 37 SFTAVGIFVVLLA-VLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTPLLLVLTAFI 95 Query: 72 ETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP----KCRS 127 T VLT R++E+ + + G + I+PV+ A+ ++ + + + + P + R Sbjct: 96 STLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWVIPWAELRSRE 155 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 + L K +L+L + E N + + +Y + + ++ +F+ + I Sbjct: 156 YAEILKQKQELSLVEAG-EFNSLGKRNGRVYFVETFDTESGIMKNLFLREQDKNGGDNII 214 Query: 188 YAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 +A+ G S++ +++ + L G + +P D + + F+ L Sbjct: 215 FAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNL 257 >gi|302037951|ref|YP_003798273.1| putative YjgP/YjgQ family permease [Candidatus Nitrospira defluvii] gi|300606015|emb|CBK42348.1| putative Permease, YjgP/YjgQ family [Candidatus Nitrospira defluvii] Length = 361 Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust. Identities = 41/193 (21%), Positives = 83/193 (43%), Gaps = 20/193 (10%) Query: 49 LLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAI 108 +LK+ +L+P+ L + P + T ++ + EL+ + G S + L + V A Sbjct: 51 VLKVFAHLLPSFLVLTLPIAGIIATITAFGRLSLDKELVAMRAAGFSLLRLSQSVFIFAA 110 Query: 109 LLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLY----IKISKY 164 L+ + +P +K+++ + L + L LD ++ K++ Y Sbjct: 111 LVCGLTLVMAQYGQPWSNVNLKKVA--------LNLLRDELVLELDRGVFNEAIPKMTIY 162 Query: 165 NPNNTL----QGIFIVDSRDTQTHKIYYAQSGSIDLD----RQAIILNDGEVHRKSPISK 216 P+ +GIF+ D R+ +I AQ + D + A+ L +G +H + + Sbjct: 163 VPDAQEGQDNRGIFVADERNPADPRIIVAQQYQVMTDPASSQVALRLMNGVIHSRPQNPE 222 Query: 217 DISIMKFKSYTLQ 229 + + F SY L+ Sbjct: 223 EYQKISFTSYDLK 235 >gi|291045045|ref|ZP_06570753.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|291011048|gb|EFE03045.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] Length = 384 Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust. Identities = 46/223 (20%), Positives = 103/223 (46%), Gaps = 11/223 (4%) Query: 15 SFLMSCLFIVFIAWVIQILQRINLVSSSTE---SLNILLKISGYLIPTVLPMVTPFCFAM 71 SF +F+V +A V+ Q INL+ + + +++ +L + G+ + + P++ + Sbjct: 25 SFTAVGIFVVLLA-VLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTPLLLVLTAFI 83 Query: 72 ETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP----KCRS 127 T VLT R++E+ + + G + I PV+ A+ +I + + + + P + R Sbjct: 84 STLTVLTRYWRDSEMSVWLSCGLALKQWISPVMQFAVPFAILIAVMQLWVIPWAELRSRE 143 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 + L K +L+L + NL R + +Y + + ++ +F+ + I Sbjct: 144 YAEILKQKQELSLVEAGEFNNLGKR-NGRVYFVETFDTESGIMKNLFLREQDKNGGDNII 202 Query: 188 YAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 +A+ G+ L +++ + L G + +P D + + F+ L Sbjct: 203 FAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNL 245 >gi|315125734|ref|YP_004067737.1| hypothetical protein PSM_A0636 [Pseudoalteromonas sp. SM9913] gi|315014248|gb|ADT67586.1| hypothetical protein PSM_A0636 [Pseudoalteromonas sp. SM9913] Length = 355 Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust. Identities = 34/173 (19%), Positives = 82/173 (47%), Gaps = 1/173 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ + Y+ R I ++ + + +V I+ +I+ ++++ V + + + + Y IP Sbjct: 2 MKTLDWYLGRSILQTTGFALMVLVGISTLIKFIEQLKSVGRGSYDIMTAMLYTIYSIPDD 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L ++ N+EL+++ G SR+ +I V+ AI +++ + Sbjct: 62 LVVFFPMAALIGGLTGLGALASNSELVVMQAAGMSRLQIIGSVMKTAIFMALCVMALGEW 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI 173 P + K++ +A ++ ++ + D + +I I + N L+G+ Sbjct: 122 GAPAAQLHAKEMRNQAIHGGDVFNAQKGVWAK-DANNFINIEDVDQNGMLRGV 173 >gi|209545529|ref|YP_002277758.1| permease YjgP/YjgQ family protein [Gluconacetobacter diazotrophicus PAl 5] gi|209533206|gb|ACI53143.1| permease YjgP/YjgQ family protein [Gluconacetobacter diazotrophicus PAl 5] Length = 402 Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust. Identities = 41/184 (22%), Positives = 78/184 (42%), Gaps = 13/184 (7%) Query: 37 NLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSR 96 N+++S +L I + L+P L + P + +V+ M++N E+ + +G S Sbjct: 52 NVLASDGGTLKIFAGLLADLVPHYLGLALPAAICVSVFSVVRRMSQNNEIDALMASGVSL 111 Query: 97 ITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD 156 + + +P + + +L + F I+P R +Q A A +L+ +F D Sbjct: 112 LRIARPFVVMGAVLGLVGFSLYGFIQPYARYDFRQALYIASHAGWTPHLQARMFAAPSDT 171 Query: 157 LYIKISKYNPNNT-LQGIFIVD-----SRD--TQTHKIYYAQSGS---IDLDRQAIIL-- 203 L + + T L+ +FI D RD + ++ G+ +DL I+ Sbjct: 172 LMLTADQVQGAGTRLRRVFIRDKSAGLERDITADSGRLLMTDDGTTVRLDLAHGVIVTDR 231 Query: 204 NDGE 207 NDG Sbjct: 232 NDGR 235 >gi|225871810|ref|YP_002753264.1| permease, YjgP/YjgQ family [Acidobacterium capsulatum ATCC 51196] gi|225794430|gb|ACO34520.1| permease, YjgP/YjgQ family [Acidobacterium capsulatum ATCC 51196] Length = 772 Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust. Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 32/209 (15%) Query: 15 SFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLI---PTVLPMVTPFCFAM 71 SF+M LF F LV + + LL + YLI P+++ ++TP + Sbjct: 427 SFVMLMLFFTFF----------ELVGDIIRNHSSLLVVGEYLIDLTPSMIYLITPLAVLI 476 Query: 72 ETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC------ 125 V MNR++E+ + TG S ++ P++ +A L+++ LF P+ Sbjct: 477 AVLVVFGLMNRSSEITAMKATGISLYRIVLPIMVIASLMAVGLFFFNEYYVPQANRKQQA 536 Query: 126 -RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKI----SKYNPN-NTLQG--IFIVD 177 R+ IK L A+ T S+ E F + + + ++P+ NT +F D Sbjct: 537 LRNEIKGLPAQ-----TTSHPGEQWMFGKREPGHPGMIFYYQYFDPDTNTFLNLTVFEFD 591 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDG 206 + K +AQ S D IL DG Sbjct: 592 PQSFTLMKRTFAQMASWDQKDHRWILQDG 620 >gi|240116444|ref|ZP_04730506.1| hypothetical protein NgonPID1_09463 [Neisseria gonorrhoeae PID18] gi|260441666|ref|ZP_05795482.1| hypothetical protein NgonDG_11382 [Neisseria gonorrhoeae DGI2] gi|268602116|ref|ZP_06136283.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18] gi|268586247|gb|EEZ50923.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18] Length = 371 Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust. Identities = 53/260 (20%), Positives = 118/260 (45%), Gaps = 12/260 (4%) Query: 15 SFLMSCLFIVFIAWVIQILQRINLVSSSTE---SLNILLKISGYLIPTVLPMVTPFCFAM 71 SF +F+V +A V+ Q INL+ + + +++ +L + G+ + + P++ + Sbjct: 12 SFTAVGIFVVLLA-VLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTPLLLVLTAFI 70 Query: 72 ETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP----KCRS 127 T VLT R++E+ + + G + I PV+ A+ +I + + + + P + R Sbjct: 71 STLTVLTRYWRDSEMSVWLSCGLALKQWISPVMQFAVPFAILIAVMQLWVIPWAELRSRE 130 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 + L K +L+L + NL R + +Y + + ++ +F+ + I Sbjct: 131 YAEILKQKQELSLVEAGEFNNLGKR-NGRVYFVETFDTESGIMKNLFLREQDKNGGDNII 189 Query: 188 YAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQ 245 +A+ G+ L +++ + L G + +P D + + F+ L S I ++ + Sbjct: 190 FAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLII-STTPKLIDPVSHRR 248 Query: 246 NLSFLLNPNPNNPNYRPELL 265 +S +NP ++ EL+ Sbjct: 249 TISTAQLIGSSNPQHQAELM 268 >gi|308050967|ref|YP_003914533.1| permease YjgP/YjgQ family protein [Ferrimonas balearica DSM 9799] gi|307633157|gb|ADN77459.1| permease YjgP/YjgQ family protein [Ferrimonas balearica DSM 9799] Length = 354 Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust. Identities = 51/260 (19%), Positives = 109/260 (41%), Gaps = 19/260 (7%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSST-ESLNILLKISGYLIPTVLP 62 +LYI R I + + L + ++ +I+ + ++ LV + ++ L + +L+P + Sbjct: 5 LDLYIARTIINTSALCLLVLTGLSGLIKFVDQLRLVGRGDFTTWDVALYVL-FLVPRDIE 63 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M P + + + ++EL+++ G SR+ + V+ A+ L I + + Sbjct: 64 MFFPIAAMLGALIGMGMLASSSELVVMQAAGLSRLNIAASVMKTAVPLMIIAMLIGEYVA 123 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SRDT 181 P T +++ A+ + + + D +L++ I++ TL+G+ I D Sbjct: 124 PVSEQTAREMRAQKTSGGSLISSSTGTWAK-DGELFVNITEVQDARTLKGVTIYRFDGDN 182 Query: 182 QTHKIYYAQSGSID--------------LDRQAIILNDGEVHRKSPISKD-ISIMKFKSY 226 +I +A+ G D D Q L+ E+ S ++ + + ++ K Sbjct: 183 LLREITFAEQGLYDGKAWRLLDVTETDLTDEQVSTLDRDELRWPSSLTPEKLQVVTVKPE 242 Query: 227 TLQTESANSSTIVLKANDQN 246 L E LKAN Q+ Sbjct: 243 GLSIEGLIDYVDYLKANRQD 262 >gi|329850877|ref|ZP_08265722.1| hypothetical protein ABI_37960 [Asticcacaulis biprosthecum C19] gi|328841192|gb|EGF90763.1| hypothetical protein ABI_37960 [Asticcacaulis biprosthecum C19] Length = 385 Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust. Identities = 56/274 (20%), Positives = 115/274 (41%), Gaps = 7/274 (2%) Query: 26 IAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTE 85 IA + Q L + LV +S ++++ +P + ++ P + T LT + E Sbjct: 15 IALISQSLTQFELVVERGQSAWTFIRVTLLSMPLLSGLIFPIALFVGTLVALTRLQGEHE 74 Query: 86 LLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYL 145 +G S + P++ + + +F S ++P ++++ K + L + + Sbjct: 75 FTAAFASGMSLRQVSSPIIRIGVYFLLFSLASNLFLQPWSARSMREELFKVKNDLVSTLV 134 Query: 146 EENLFFRLDDDLYIKISKYNPNNTLQGIFI-VDSRDTQTHKIYYAQSGSIDL--DRQAII 202 +E F L I + + + N+ L+ I+I + + + + Y A+ G I +I Sbjct: 135 KEGEFSTSPSGLTIYVQRIDQNSLLRQIYIRIPATEGGADRTYVAREGKITQVGTESLLI 194 Query: 203 LNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPN----PNNP 258 L +G S D S + A+ ++ K +++ L L PN + Sbjct: 195 LRNGSTQWVSGGELDHITFDETSIPISDYFASDDSLNFKESERYLHELFFPNLALPGDGG 254 Query: 259 NYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 NY + + +E H RL L+ + F L++I+A Sbjct: 255 NYERKNVGKLMAEGHARLASPLYNLSFVLLAIMA 288 >gi|217966587|ref|YP_002352093.1| permease YjgP/YjgQ family protein [Dictyoglomus turgidum DSM 6724] gi|217335686|gb|ACK41479.1| permease YjgP/YjgQ family protein [Dictyoglomus turgidum DSM 6724] Length = 364 Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust. Identities = 53/232 (22%), Positives = 102/232 (43%), Gaps = 6/232 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRI-NLVSSSTESLNILLKISGYLIPT 59 +K++ YI I F + + + +IQIL + + S ++LK+ Y IP+ Sbjct: 5 IKTYHKYIFSEILGPFFLGIFGFILVM-LIQILYEFSDFIIMRRVSFEVVLKLLYYKIPS 63 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITL-IKPVLFLAILLSIFLFISE 118 + V P + R+ E+ + ++G ++L + P+LF +L I F + Sbjct: 64 LFVFVIPVSLLFAIIFSFGRLMRDGEIFAMRSSGIYFLSLTLTPLLFSILLSLILWFFTY 123 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVD 177 ++I P+ +L K EN+FF ++ Y + K N N +Q + + D Sbjct: 124 SLI-PESNYRSNRLIQKYFFLNPAPIKGENVFFHDEEGRYYYVKKIIENRNVMQNVLVFD 182 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ 229 + + + I Y +I +R ++IL +G VH S + KF+ + + Sbjct: 183 TSSSNKYPIIYTAEEAI-WNRDSLILKNGVVHHLGDDSFVVWEGKFEEFKIN 233 >gi|162148704|ref|YP_001603165.1| permease [Gluconacetobacter diazotrophicus PAl 5] gi|161787281|emb|CAP56875.1| putative permease [Gluconacetobacter diazotrophicus PAl 5] Length = 402 Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust. Identities = 32/142 (22%), Positives = 63/142 (44%), Gaps = 1/142 (0%) Query: 37 NLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSR 96 N+++S +L I + L+P L + P + +V+ M++N E+ + +G S Sbjct: 52 NVLASDGGTLKIFAGLLADLVPHYLGLALPAAICVSVFSVVRRMSQNNEIDALMASGVSL 111 Query: 97 ITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD 156 + + +P + + +L + F I+P R +Q A A +L+ +F D Sbjct: 112 LRIARPFVVMGAVLGLVGFSLYGFIQPYARYDFRQALYIASHAGWTPHLQARMFAAPSDT 171 Query: 157 LYIKISKYNPNNT-LQGIFIVD 177 L + + T L+ +FI D Sbjct: 172 LMLTADQVQGAGTRLRRVFIRD 193 >gi|114797396|ref|YP_760970.1| YjgP/YjgQ permease [Hyphomonas neptunium ATCC 15444] gi|114737570|gb|ABI75695.1| putative permease, YjgP/YjgQ family [Hyphomonas neptunium ATCC 15444] Length = 373 Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust. Identities = 41/193 (21%), Positives = 83/193 (43%), Gaps = 22/193 (11%) Query: 29 VIQILQRINLVSSSTE-SLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELL 87 +I +++++ + E +L L++S +P ++ PF T T +NR +EL Sbjct: 32 MIDVVEQMRTIGGDVEITLLDALRLSLMKLPMIIEQTLPFALLAATMMAFTRLNRRSELS 91 Query: 88 IIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAK--------AQLA 139 II +G S + PV+ L + L IF ++ N + + + + A+ Q+A Sbjct: 92 IIRASGLSAWRFLTPVIVLGVALGIFSSLALNPLAARLSQSFEAERARLLDVGREVVQVA 151 Query: 140 LTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSID---- 195 T +L + DD I + G ++D + + ++Y + + D Sbjct: 152 ETGVWLRQG-----DDSSQYVIHARRVEDG--GRTLLDVKIIEEQRLYNGRQPTNDFAFV 204 Query: 196 --LDRQAIILNDG 206 +D + +LN+G Sbjct: 205 RRIDAEKAVLNEG 217 >gi|261819786|ref|YP_003257892.1| permease YjgP/YjgQ family protein [Pectobacterium wasabiae WPP163] gi|261603799|gb|ACX86285.1| permease YjgP/YjgQ family protein [Pectobacterium wasabiae WPP163] Length = 370 Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust. Identities = 47/252 (18%), Positives = 101/252 (40%), Gaps = 22/252 (8%) Query: 47 NILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFL 106 N+++ + G +P ++ ++ P + + +E+ ++ G + L+K L L Sbjct: 46 NLVISLLGLGVPEMVQLILPLSLFLGVLMTFGRLYAESEITVMHACGLGKRVLLKAALVL 105 Query: 107 AILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP 166 A+ I I+ + P +++ A+A+ + L E F + Sbjct: 106 AVFTGIIATINVMWLSPWSSRHQEEVLAEAKANPGMAALVEGQFQSAQGGNAVLFVGNVK 165 Query: 167 NNTLQGIFIVDSRDTQTHK--IYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMK 222 + Q +F+ R + + + A G I + Q + L++G + + + +D I Sbjct: 166 GSEFQHVFLAQLRPSGNARPSVVVADRGHITNEEGAQVVTLDNGSRYEGTALLRDFRITD 225 Query: 223 FKSYTL----QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQ 278 F +Y Q + N+S + ++ L N + ++ R+EFH RLT Sbjct: 226 FTNYQAVIGHQAVTLNNSDV----QQMDMRTLWNSDAHDA----------RAEFHWRLTL 271 Query: 279 WLFPVIFGLISI 290 L +I L+ + Sbjct: 272 ILSVLIMALMVV 283 >gi|194336947|ref|YP_002018741.1| permease YjgP/YjgQ family protein [Pelodictyon phaeoclathratiforme BU-1] gi|194309424|gb|ACF44124.1| permease YjgP/YjgQ family protein [Pelodictyon phaeoclathratiforme BU-1] Length = 441 Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust. Identities = 59/240 (24%), Positives = 104/240 (43%), Gaps = 22/240 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS--------TESLNILLKI 52 MK + YIL+ SFL + + I+F+ ILQ + T + ++L Sbjct: 1 MKIIDRYILKAHVGSFLFAFVTIIFV----LILQFFATFADRFMGKGIGFTAMVELILLQ 56 Query: 53 SGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSI 112 S +++ PM M S+ +E+ + +G S L+ PVL +LLS+ Sbjct: 57 SAWMVGLAAPMAVLVSVVM----AFGSLTTTSEMTVFRASGISLYRLMMPVLLAGLLLSL 112 Query: 113 FLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQ 171 F+ N++ P+ K L + L EN F L D I + + ++ L+ Sbjct: 113 FVERFNNVVLPEANYYAKSLMVDIARSKPAFGLAENAFSTLVDGYSIFVRSTDEHSKELR 172 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDL--DRQAIILN--DGEVHR-KSPISKDISIMKFKSY 226 GI I D+ + + A+ G+ID D +++ +GE+H+ + P K M F+ + Sbjct: 173 GIVIYDASRSDYKTMVTAEKGTIDFSGDDHYLVMTLFNGEIHQVRQPDHKSYRNMSFQKH 232 >gi|158521442|ref|YP_001529312.1| permease YjgP/YjgQ family protein [Desulfococcus oleovorans Hxd3] gi|158510268|gb|ABW67235.1| permease YjgP/YjgQ family protein [Desulfococcus oleovorans Hxd3] Length = 391 Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust. Identities = 58/292 (19%), Positives = 118/292 (40%), Gaps = 15/292 (5%) Query: 31 QILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIID 90 Q+L N + + L +++ + Y P L V P M M+ + E++ + Sbjct: 33 QLLDITNFIVNYGTGLGVVMLMLVYSTPYFLVYVIPISTMMAVLLTFLRMSGDNEIVALK 92 Query: 91 NTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLF 150 ++G S L PV+ + + + P+ + KQL+ + + + F Sbjct: 93 SSGVSLYRLFYPVMGFCVAACLLTLLMTLWGLPRGKVAFKQLAYTVVTSNPNLGIVDREF 152 Query: 151 FRLDDDLYIKISKYNPNN-TLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAII----LND 205 L + + + + +++ L +FI D R A SG++D+D + L D Sbjct: 153 NTLFNGITLYVGQFDKKQRVLSDVFIEDQRSAGKPVTICAPSGTLDVDMVGQVVRLSLAD 212 Query: 206 GEVHRKSPISKDISIMKFKSYT--LQTESAN--SSTIVLKANDQNLSFLLNP-NPNNPNY 260 G +++ + +++F++Y L E A +ST + +L+ L + Sbjct: 213 GRMYQVDLRDRSSRVIRFETYDIHLDLERAGQVASTAARSEKEMSLAELFDHIQKAGAAG 272 Query: 261 RPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISL 312 P + R E HK+ + V+ GL+++ + R RK I ++L Sbjct: 273 LPR--GSARMELHKKFSIPFACVVLGLLAVPLGVQ---ARGRKTSSGIGLAL 319 >gi|333029769|ref|ZP_08457830.1| permease YjgP/YjgQ family protein [Bacteroides coprosuis DSM 18011] gi|332740366|gb|EGJ70848.1| permease YjgP/YjgQ family protein [Bacteroides coprosuis DSM 18011] Length = 632 Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 63/134 (47%), Gaps = 4/134 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRI--NLVSSSTESLNILLKISGYLIP 58 +K + ++L+ G F+ + FI +++Q L R +LV E + +L + Y Sbjct: 4 LKKLDKFVLKSFGLLFI-ATFFICLFIFMMQFLWRYVDDLVGKGLE-MTVLGQFFFYSAL 61 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 T++P P + + + ELL + G S +I+P++ LA+LL F+ + Sbjct: 62 TLIPASLPLATLLASLITFGNFGERFELLAMKAAGISLFKIIRPLMILAVLLCGISFVFQ 121 Query: 119 NIIEPKCRSTIKQL 132 N I PK S + L Sbjct: 122 NNIGPKAFSKLTTL 135 >gi|254282226|ref|ZP_04957194.1| queuine tRNA-ribosyltransferase [gamma proteobacterium NOR51-B] gi|219678429|gb|EED34778.1| queuine tRNA-ribosyltransferase [gamma proteobacterium NOR51-B] Length = 389 Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust. Identities = 38/190 (20%), Positives = 84/190 (44%), Gaps = 13/190 (6%) Query: 47 NILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNR---NTELLIIDNTGTSRITLIKPV 103 +ILL + + +P+ ++ P + +L S+ R ++EL+++ G L + Sbjct: 73 DILLPVMLFKLPSFFELILPLGLFI---GILLSLGRLYADSELVVLKACGVGPGKLATYL 129 Query: 104 LFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISK 163 L A+ S+ + + P+ + + + + A L E F + ++ ++ Sbjct: 130 LLPALAFSLVVGFLSLYLAPEGSARAQAMLDNPRSAEGLQQLSEGRFKKQRSGNFVSYAE 189 Query: 164 Y-NPNNTLQGIFIVDSRDTQTHK--IYYAQSGSIDLD----RQAIILNDGEVHRKSPISK 216 + + + IF+V+ + T + + YA +G + +D R+ + L DG + P Sbjct: 190 TISDDGVMHNIFVVEKSEAGTARTRVTYADAGEVVVDPENGRRYLELRDGARYEGVPGQA 249 Query: 217 DISIMKFKSY 226 D ++ KFK Y Sbjct: 250 DYTVTKFKRY 259 >gi|193214339|ref|YP_001995538.1| permease YjgP/YjgQ family protein [Chloroherpeton thalassium ATCC 35110] gi|193087816|gb|ACF13091.1| permease YjgP/YjgQ family protein [Chloroherpeton thalassium ATCC 35110] Length = 455 Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust. Identities = 48/210 (22%), Positives = 94/210 (44%), Gaps = 9/210 (4%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRI--NLVSSSTESLNILLKISGYLIPTVLPMV 64 YIL+ F+ +VF+ +++Q L R V E +N+++++ I + + Sbjct: 7 YILKSHIGPFVFGFATVVFV-FLMQFLARYLDRFVGKGLE-MNVIIELIVLQIAWMAVLA 64 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P + T +M ++E+ I +G S + ++ P++ +L+ + NI+ P+ Sbjct: 65 APMAVLISTLMTFGNMVNSSEMTAIRASGISLLRIMIPIIVAGAILTYLMERFNNIVLPE 124 Query: 125 CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSRDTQT 183 K L A LEEN+F + I K + ++ + G+ I D+R++ Sbjct: 125 ANHQAKVLLMDISRAKPSFGLEENVFSDMIRGYTILARKTDEKSSNIAGVTIYDNRNSTR 184 Query: 184 HKIYYAQSG----SIDLDRQAIILNDGEVH 209 + + A SG + DL + L GE+H Sbjct: 185 NVVITADSGFFEFTSDLRNMIMTLKHGEMH 214 >gi|189347121|ref|YP_001943650.1| permease YjgP/YjgQ family protein [Chlorobium limicola DSM 245] gi|189341268|gb|ACD90671.1| permease YjgP/YjgQ family protein [Chlorobium limicola DSM 245] Length = 403 Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust. Identities = 54/225 (24%), Positives = 104/225 (46%), Gaps = 25/225 (11%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQIL---------QRINLVSSSTESLNILLK 51 MK + YIL+ F+++ + IVF+ V+Q L + IN+ + +++ Sbjct: 1 MKIIDRYILKSHIGPFILAFITIVFV-LVLQFLAGFSDRFLGKGINIADIA----ELVML 55 Query: 52 ISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLS 111 S +++ +PM M +M ++E+ + +G S L PVL +A LLS Sbjct: 56 QSAWMVVFAVPMAVLVAVIM----AYGTMTNSSEMTVFRASGLSLYRLAVPVLIVAALLS 111 Query: 112 IFLFISENIIEPKCRSTIKQLSAK-AQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNT 169 + + N++ P+ K L A+ TF L EN F D I + K + + Sbjct: 112 LLVERFNNVVIPEANYRSKSLMMDIARAKPTFG-LTENAFSSFIDGYSIFVRKTDEASKE 170 Query: 170 LQGIFIVDSRDTQTHKIYYAQSGSIDL--DRQAIILN--DGEVHR 210 ++G+ + D R+ ++ + A+ G I D + +++ +GE+H+ Sbjct: 171 IRGVVLYDLRNPKSRTMMSAERGVIRFSPDNRFLVMTLFNGEIHQ 215 >gi|91203264|emb|CAJ72903.1| hypothetical protein kustd2158 [Candidatus Kuenenia stuttgartiensis] Length = 357 Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust. Identities = 42/183 (22%), Positives = 80/183 (43%), Gaps = 10/183 (5%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRIN-LVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+L+ +F + L I +I +LQ+++ + S + + YL P ++ Sbjct: 8 YLLKAFFPTFFLCLLIISGTYVIIDLLQKLDDFLEMGINSFGVASRYYAYLFPVIITQFF 67 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + VL ++RN E+L + G S ++ P+ + + + F + I P+ Sbjct: 68 PAITLVAVGIVLVRLSRNKEILAMQVAGISLYRILLPIFVVTVFMGFASFGDQEWIVPRF 127 Query: 126 RSTIKQLSAKAQLALTF-SYLEENLFFRLDD-DLYIKISKY-NPNNTLQGIFIVDSRDTQ 182 ++ + TF S ++ NL D+ + I+I KY N + +FI+ SRD Sbjct: 128 AEKLEAMQQN-----TFDSDVQRNLLVHDDENNALIRIWKYSNKTQKMDSVFIL-SRDEN 181 Query: 183 THK 185 K Sbjct: 182 GKK 184 >gi|292572537|gb|ADE30452.1| Putative permease [Rickettsia prowazekii Rp22] Length = 377 Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust. Identities = 45/217 (20%), Positives = 104/217 (47%), Gaps = 10/217 (4%) Query: 26 IAWVIQILQRINLVSSSTESL---NILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNR 82 I W+ QIL+ + L + + N+++ + L+ +LP++T + + ++ Sbjct: 43 IVWITQILKLLYLFDKGIKVIDFFNLVVLVLPTLLFILLPIIT----VIAVLYIYNNLKV 98 Query: 83 NTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTF 142 +L+I+ +G + I L P L++A+ + + + + I P +K + Sbjct: 99 ERQLIILQTSGVNNIQLALPALYVALTIMLLAYYISSTILPLSHINLKSRLNFIKNNYIS 158 Query: 143 SYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAII 202 S +EE F ++ ++ + I K N + GI I D+R+ + +A SG++++ I Sbjct: 159 SMIEEKTFNKITKNITVFIDKKLTGNIMNGIIIFDNRNADNPSVVFAGSGTLNIYGNNPI 218 Query: 203 --LNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 LN G + ++ + +++ + F S ++ ++ +S T Sbjct: 219 FELNKG-LRQEYDANGNLTQLTFDSLMIKLQNNSSLT 254 >gi|15604701|ref|NP_221219.1| hypothetical protein RP871 [Rickettsia prowazekii str. Madrid E] gi|6831726|sp|Q9ZC95|Y871_RICPR RecName: Full=Uncharacterized protein RP871 gi|3861396|emb|CAA15295.1| unknown [Rickettsia prowazekii] Length = 360 Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust. Identities = 45/217 (20%), Positives = 104/217 (47%), Gaps = 10/217 (4%) Query: 26 IAWVIQILQRINLVSSSTESL---NILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNR 82 I W+ QIL+ + L + + N+++ + L+ +LP++T + + ++ Sbjct: 26 IVWITQILKLLYLFDKGIKVIDFFNLVVLVLPTLLFILLPIIT----VIAVLYIYNNLKV 81 Query: 83 NTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTF 142 +L+I+ +G + I L P L++A+ + + + + I P +K + Sbjct: 82 ERQLIILQTSGVNNIQLALPALYVALTIMLLAYYISSTILPLSHINLKSRLNFIKNNYIS 141 Query: 143 SYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAII 202 S +EE F ++ ++ + I K N + GI I D+R+ + +A SG++++ I Sbjct: 142 SMIEEKTFNKITKNITVFIDKKLTGNIMNGIIIFDNRNADNPSVVFAGSGTLNIYGNNPI 201 Query: 203 --LNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 LN G + ++ + +++ + F S ++ ++ +S T Sbjct: 202 FELNKG-LRQEYDANGNLTQLTFDSLMIKLQNNSSLT 237 >gi|294645356|ref|ZP_06723067.1| putative membrane protein [Bacteroides ovatus SD CC 2a] gi|292639294|gb|EFF57601.1| putative membrane protein [Bacteroides ovatus SD CC 2a] Length = 616 Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust. Identities = 46/199 (23%), Positives = 90/199 (45%), Gaps = 13/199 (6%) Query: 12 IGRSFLMSCLFIVFIAWVIQILQRI--NLVSSSTESLNILLKISGYLIPTVLPMVTPFCF 69 IG F+ CLFI +++Q L R LV E ++++ + Y T++P+ P Sbjct: 4 IGTFFI--CLFI----FMMQFLWRYVDELVGKGLE-MSVMAQFFFYSALTLVPVSLPLAV 56 Query: 70 AMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTI 129 + + + ELL + G S + +++P+ F L F +N++ P ++ + Sbjct: 57 LLASLITFGNFGERYELLAMKAAGISLLKIMRPLAFFVCGLVGVSFYFQNVVGPIAQAKL 116 Query: 130 KQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSRDT-QTHKIY 187 L + + E +F+ D +K++K N L + I +D + +I Sbjct: 117 GTLILSMKQKSPELDIPEGVFYSEIKDYNLKVAKKNRKTGMLYDVLIYSMKDGFEKARII 176 Query: 188 YAQSGSIDL--DRQAIILN 204 YA SG +++ D+Q + L+ Sbjct: 177 YADSGRLEMTADKQHLWLH 195 >gi|320107369|ref|YP_004182959.1| permease YjgP/YjgQ family protein [Terriglobus saanensis SP1PR4] gi|319925890|gb|ADV82965.1| permease YjgP/YjgQ family protein [Terriglobus saanensis SP1PR4] Length = 782 Score = 44.7 bits (104), Expect = 0.025, Method: Compositional matrix adjust. Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 5/99 (5%) Query: 49 LLKISGYL---IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLF 105 L+ + GYL IP ++ +TP C + + +NR++EL + +G S ++ P+ Sbjct: 461 LVTVGGYLLNLIPYMIYSLTPLCALIAVLVTVGGLNRSSELTAMKASGMSLYRIVAPIFV 520 Query: 106 LAILLSIFLFISENIIEPKCRSTIKQLSA--KAQLALTF 142 LA +L++ LF +++ P+ + L + K + A TF Sbjct: 521 LAAVLAVGLFAFDDLYLPQANRRQEALRSEIKGKPAQTF 559 >gi|238028370|ref|YP_002912601.1| permease [Burkholderia glumae BGR1] gi|237877564|gb|ACR29897.1| Permease, putative [Burkholderia glumae BGR1] Length = 363 Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust. Identities = 42/191 (21%), Positives = 83/191 (43%), Gaps = 14/191 (7%) Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLF----LAILLSIFLFISENIIEPKCRSTIKQ 131 VLT R++E+++ +G S LI+P+ + +L++ F F+ P K Sbjct: 75 VLTRWYRDSEMVVWLASGVSLTRLIRPIGVFSTPIVLLIAFFAFVGW----PWSNQQSKL 130 Query: 132 LSAKAQLALTFSYLEENLFFRLDDDLYIK-ISKYNPNNT-LQGIFIVDSRDTQTHKIYYA 189 + A+ Q S L F + I K +P+ +Q +F+ + + + I + Sbjct: 131 IKARFQQRDEVSLLAPGQFRESTATHRVFFIEKMSPDQARVQNVFVTTTEQGKVN-IVVS 189 Query: 190 QSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 Q+G ++ ++ I+L +G + P + IM+F+ Y ++ +S T + Sbjct: 190 QTGRVETEKNGDRFIVLENGRRYDGVPGQPNFKIMQFERYGVKIQSKQVVTQPTTTSTST 249 Query: 247 LSFLLNPNPNN 257 L L +P N Sbjct: 250 LELLRDPTKEN 260 >gi|88859093|ref|ZP_01133734.1| hypothetical protein PTD2_08814 [Pseudoalteromonas tunicata D2] gi|88819319|gb|EAR29133.1| hypothetical protein PTD2_08814 [Pseudoalteromonas tunicata D2] Length = 354 Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust. Identities = 52/264 (19%), Positives = 115/264 (43%), Gaps = 17/264 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y+ R I ++ + L +V I+ +I+ ++++ V + + + + IP Sbjct: 1 MKILDWYLGRSILQTTGFALLVLVGISTLIKFIEQLKYVGRGSYDVMTAGLYTLFSIPAD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ N+EL+++ G SR +I+ V+ A+++++ + Sbjct: 61 VVTFFPMATLIGGLTGLGALASNSELVVMQAAGLSRFEIIRSVMKTALVMALCVMAMGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQG-------- 172 P+ + K+L A + + ++ + D D+++ I + N L G Sbjct: 121 GVPEAQKQAKELRTYAISGGSIFNARQGVWAK-DGDVFLNIDNVDDNGQLNGLKMYQFNK 179 Query: 173 ----IFIVDSRDTQTHKIYYAQSG--SIDLDRQAIIL-NDGEVHRKSPISKD-ISIMKFK 224 + I +++ +H+ + G +I LD Q + N E S ++ D + I+ K Sbjct: 180 SLDLVAITNAQSAISHRDGWLLKGVKTIYLDEQEVRQENTKEQLYVSELTPDKLGIVSLK 239 Query: 225 SYTLQTESANSSTIVLKANDQNLS 248 + +L LK N+Q+ S Sbjct: 240 AESLSFTGLIGYLDYLKKNEQDTS 263 >gi|260174364|ref|ZP_05760776.1| hypothetical protein BacD2_21081 [Bacteroides sp. D2] Length = 616 Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust. Identities = 46/199 (23%), Positives = 90/199 (45%), Gaps = 13/199 (6%) Query: 12 IGRSFLMSCLFIVFIAWVIQILQRI--NLVSSSTESLNILLKISGYLIPTVLPMVTPFCF 69 IG F+ CLFI +++Q L R LV E ++++ + Y T++P+ P Sbjct: 4 IGTFFI--CLFI----FMMQFLWRYVDELVGKGLE-MSVMAQFFFYSALTLVPVSLPLAV 56 Query: 70 AMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTI 129 + + + ELL + G S + +++P+ F L F +N++ P ++ + Sbjct: 57 LLASLITFGNFGERYELLAMKAAGISLLKIMRPLAFFVCGLVGVSFYFQNVVGPIAQAKL 116 Query: 130 KQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSRDT-QTHKIY 187 L + + E +F+ D +K++K N L + I + +D + I Sbjct: 117 GTLILSMKQKSPELDIPEGVFYSEIKDYNLKVAKKNRKTGMLYDVLIYNMKDGFENAHII 176 Query: 188 YAQSGSIDL--DRQAIILN 204 YA SG +++ D+Q + L+ Sbjct: 177 YADSGRLEMTADKQHLWLH 195 >gi|310822424|ref|YP_003954782.1| hypothetical protein STAUR_5183 [Stigmatella aurantiaca DW4/3-1] gi|309395496|gb|ADO72955.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 371 Score = 44.3 bits (103), Expect = 0.034, Method: Compositional matrix adjust. Identities = 59/292 (20%), Positives = 123/292 (42%), Gaps = 25/292 (8%) Query: 22 FIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMN 81 F+ + +V+Q L ++ S +L + ++ YL P L P F M L ++ Sbjct: 22 FMFLLLFVMQFLLGTEVLLGSAVTLTDIGRLILYLTPHFLVKALPIAFLMAILLGLGRLS 81 Query: 82 RNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALT 141 + EL + G S + L+ + + +LL+ + + +P +++K+L + Sbjct: 82 EDRELTALQALGISPVQLLLGPMAIGLLLAGLMALLAFTAQPWGLTSVKELVNEVIKKNV 141 Query: 142 FSYLEENLFFRLDDDLYI---KISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDR 198 ++ +F+ DL + ++S+ T + + D R+ + + AQ G + + R Sbjct: 142 AGDVKSGVFYEDLSDLTLYAERVSREGGEWT--HVLLHDDREPSSPLLVLAQRGRVSM-R 198 Query: 199 QA-----IILNDGEVHRKSPISKDISIMKFKSYTLQT---ESANSSTIVLKANDQNLS-- 248 + ++L +GEVHR + + D S+++F+ + S N + ++ + +S Sbjct: 199 EGDEALRLVLEEGEVHRATRSTADYSLLRFEQGEISVGLGGSMNRKSNRFRSQKEEMSPG 258 Query: 249 ----FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + N RP L+ H RL + P+ F L+ A R Sbjct: 259 ELIQAAEEAEKSGGNPRPFLM-----AIHMRLGNAVAPLSFALLGTPLAIGR 305 >gi|326335584|ref|ZP_08201771.1| YjgP/YjgQ family permease [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692350|gb|EGD34302.1| YjgP/YjgQ family permease [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 481 Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust. Identities = 61/245 (24%), Positives = 110/245 (44%), Gaps = 29/245 (11%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL +F+ S L I+ I I I+ ++ S+ I++K ++P + Sbjct: 1 MKILDRYILSRFIFNFVSSFLIIILIFIFQTIWLYIDELAGKGLSIFIIIKFVALMLPNL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P++ P + + L + + EL + +G S + + ++ +LLSI +F + N Sbjct: 61 IPLILPLTVVLSSIMTLGAFGESYELAAMKASGVSLLKGTRTLILFMLLLSIGVFFTFNN 120 Query: 121 IEP-------KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI 173 ++P R +IK + + LA++ + +F + D IK+ K N G Sbjct: 121 LQPWSNRKAVALRDSIK--NKQPSLAIS-----QGIFNNV-QDFSIKVEKKTGEN---GE 169 Query: 174 FIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEV--HRKSPISKDISIMKFKSYTLQTE 231 F+ D HK+ G L R I +GE+ H+K + I+K +Y + Sbjct: 170 FL---HDIVIHKL-----GVDGLSRTVIKAKEGELSGHKKGSNVLQL-ILKDGTYYEDVK 220 Query: 232 SANSS 236 SANS Sbjct: 221 SANSD 225 >gi|75675870|ref|YP_318291.1| permease YjgP/YjgQ [Nitrobacter winogradskyi Nb-255] gi|74420740|gb|ABA04939.1| permease YjgP/YjgQ [Nitrobacter winogradskyi Nb-255] Length = 365 Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust. Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 2/106 (1%) Query: 30 IQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLII 89 I++++R + ++S+ S ++ + S + +P +L +TPFC + +++R EL++ Sbjct: 37 IEMVRRTSGLASA--SALMVAETSLFRVPQLLEKLTPFCVLIGAMTCYLALSRKLELVVA 94 Query: 90 DNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAK 135 G S I P L AI L +F N + R K++ A+ Sbjct: 95 RAAGVSAWQFISPTLACAIALGVFATTVYNPLSSNLRELSKRMEAE 140 >gi|332969352|gb|EGK08377.1| YjgP/YjgQ family permease [Kingella kingae ATCC 23330] Length = 370 Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust. Identities = 49/250 (19%), Positives = 109/250 (43%), Gaps = 28/250 (11%) Query: 34 QRINLV---SSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIID 90 Q +N++ +S + +++ + + G+ + + P++ + VLT R++E+ I Sbjct: 30 QGVNMLGRAASGSVAIDAVGALIGFWVLGMTPLLLVLTAYISILTVLTRYWRDSEMAIWL 89 Query: 91 NTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLF 150 ++G IKPVL A+ L++ + + + P ++ + S +E+ F Sbjct: 90 SSGLGLKQWIKPVLTFALPLAMLVAAMQLFVLPNAELRSREYGELLKQKQNLSLIEQGTF 149 Query: 151 FRL---DDDLYIKISKYNPN-NTLQGIFIVDSRDTQTHKIYYAQSGSIDLD---RQAIIL 203 L ++ +Y + +++ + +FI + + + +AQSG + L+ R+ ++L Sbjct: 150 AELGKQNNRVYF-VEQFDAEVGEMSRLFIREVDEKGRDSVVFAQSGHMKLEADNRRVLVL 208 Query: 204 NDGEVHRKSPISKDISIMKFKSYTLQTESA--------NSSTIVLKANDQNLSFLLNPNP 255 +G + + D + F+ L +A + TI QNL Sbjct: 209 QNGYRYTGNAGQGDFEQVSFQELQLVINTAPKLIEPINHRRTI----PSQNLI-----GS 259 Query: 256 NNPNYRPELL 265 +NP Y+ EL+ Sbjct: 260 DNPQYQAELM 269 >gi|114562104|ref|YP_749617.1| permease YjgP/YjgQ family protein [Shewanella frigidimarina NCIMB 400] gi|114333397|gb|ABI70779.1| permease YjgP/YjgQ family protein [Shewanella frigidimarina NCIMB 400] Length = 352 Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust. Identities = 38/182 (20%), Positives = 79/182 (43%), Gaps = 1/182 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +LYI R I + + L + ++ +I+ + ++ LV ++ +L+P Sbjct: 1 MRILDLYIARMIVSTSSLCLLILTGLSGIIKWVDQLRLVGRGAYTMLDAGIYVLFLVPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + + N+EL+++ +G SR+ + + + AI L I + Sbjct: 61 IEMFFPMAVLLGALIGMGMLASNSELVVMQVSGMSRLQITQSAMKTAIPLMIMVMALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + K+L A + ++ + D DL++ I + NTL I + + D Sbjct: 121 GAPIAEKSAKELQATKISGGSLIKSHRGIWAK-DGDLFVNIGEVQDVNTLSNISLYEFND 179 Query: 181 TQ 182 Q Sbjct: 180 QQ 181 >gi|253572213|ref|ZP_04849617.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|298387973|ref|ZP_06997521.1| permease [Bacteroides sp. 1_1_14] gi|251838393|gb|EES66480.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|298259239|gb|EFI02115.1| permease [Bacteroides sp. 1_1_14] Length = 632 Score = 43.9 bits (102), Expect = 0.042, Method: Compositional matrix adjust. Identities = 43/201 (21%), Positives = 90/201 (44%), Gaps = 8/201 (3%) Query: 12 IGRSFLM---SCLFIVFIAWVIQILQR-INLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 I +SFLM FI +++Q L R ++ + ++++ + Y T++P+ P Sbjct: 11 IVKSFLMLFIGTFFICLFIFMMQFLWRYVDELVGKGLDMSVIAQFFFYSALTLVPISLPL 70 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 + + + ELL + G S + +++P+ F L F +N++ P ++ Sbjct: 71 AILLASLITFGNFGERYELLAMKAAGISLLKIMRPLAFFVCGLVAVSFYFQNVVGPIAQT 130 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSRDT-QTHK 185 + L + + E +F+ D +KI+K N + + I + +D + Sbjct: 131 KLYTLIISMKQKSPELDIPEGVFYSEIPDYNLKIAKKNRKTGMMYDVLIYNLKDGFENAH 190 Query: 186 IYYAQSGSIDL--DRQAIILN 204 I YA SG +++ D+Q + L+ Sbjct: 191 IIYADSGRMEMTADKQHLWLH 211 >gi|218768538|ref|YP_002343050.1| conserved integral membrane hypothetical protein [Neisseria meningitidis Z2491] gi|121052546|emb|CAM08886.1| conserved integral membrane hypothetical protein [Neisseria meningitidis Z2491] gi|308389704|gb|ADO32024.1| hypothetical protein NMBB_1799 [Neisseria meningitidis alpha710] gi|319410787|emb|CBY91172.1| conserved hypothetical integral membrane protein [Neisseria meningitidis WUE 2594] gi|325128631|gb|EGC51500.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis N1568] gi|325130631|gb|EGC53374.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis OX99.30304] gi|325144870|gb|EGC67158.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M01-240013] gi|325201754|gb|ADY97208.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M01-240149] gi|325204534|gb|ADY99987.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M01-240355] gi|325205695|gb|ADZ01148.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M04-240196] Length = 371 Score = 43.5 bits (101), Expect = 0.045, Method: Compositional matrix adjust. Identities = 44/223 (19%), Positives = 104/223 (46%), Gaps = 11/223 (4%) Query: 15 SFLMSCLFIVFIAWVIQILQRINLVSSSTE---SLNILLKISGYLIPTVLPMVTPFCFAM 71 SF +F+V +A V+ Q INL+ + + +++ +L + G+ + + P++ + Sbjct: 12 SFTAVGIFVVLLA-VLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTPLLLVLTAFI 70 Query: 72 ETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP----KCRS 127 T VLT R++E+ + + G + I+PV+ A+ ++ + + + + P + R Sbjct: 71 STLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWVIPWAELRSRE 130 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 + L K +L+L + +L R + +Y + + ++ +F+ + I Sbjct: 131 YAEILKQKQELSLVEAGGFNSLGKR-NGRVYFVETFDTESGIMKNLFLREQDKNGGDNII 189 Query: 188 YAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 +A+ G+ L +++ + L G + +P D + + F+ L Sbjct: 190 FAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNL 232 >gi|296122759|ref|YP_003630537.1| permease YjgP/YjgQ family protein [Planctomyces limnophilus DSM 3776] gi|296015099|gb|ADG68338.1| permease YjgP/YjgQ family protein [Planctomyces limnophilus DSM 3776] Length = 394 Score = 43.5 bits (101), Expect = 0.045, Method: Compositional matrix adjust. Identities = 39/188 (20%), Positives = 82/188 (43%), Gaps = 18/188 (9%) Query: 49 LLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAI 108 +L+I ++IPT+LP P + V ++ + E++ G I+++ P L + Sbjct: 47 ILQILPFIIPTLLPFTIPTALLLTVCVVYGRLSGDQEIIAAKAAGIHIISVLWPAFLLGV 106 Query: 109 LLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN 168 +LSIF + + + P I++ T + E++FF D+ ++ N + Sbjct: 107 VLSIFTLVITDQMIPWSMKRIQR---------TIAMAVEDIFF----DVLKAQNQLNLRD 153 Query: 169 TLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK-SYT 227 I ++D RD + Y + + + + E + + +D+ +M+FK Y Sbjct: 154 QGLSITVMDVRD----RTLYMPTFRYMRGNKPVTVQAKEARLRFDLDRDVVVMEFKDGYI 209 Query: 228 LQTESANS 235 + AN+ Sbjct: 210 SLPDDANT 217 >gi|325136763|gb|EGC59363.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M0579] gi|325208502|gb|ADZ03954.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis NZ-05/33] Length = 396 Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust. Identities = 44/223 (19%), Positives = 105/223 (47%), Gaps = 11/223 (4%) Query: 15 SFLMSCLFIVFIAWVIQILQRINLVSSSTE---SLNILLKISGYLIPTVLPMVTPFCFAM 71 SF +F+V +A V+ Q INL+ + + +++ +L + G+ + + P++ + Sbjct: 37 SFTAVGIFVVLLA-VLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTPLLLVLTAFI 95 Query: 72 ETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP----KCRS 127 T VLT R++E+ + + G + I+PV+ A+ ++ + + + + P + R Sbjct: 96 STLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWVIPWAELRSRE 155 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 + L K +L+L + +L R + +Y + + ++ +F+ + I Sbjct: 156 YAEILKQKQELSLVEAGGFNSLGKR-NGRVYFVETFDTESGIMKNLFLREQDKNGGDNII 214 Query: 188 YAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 +A+ G S++ +++ + L G + +P D + + F+ L Sbjct: 215 FAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNL 257 >gi|167621692|ref|YP_001672200.1| hypothetical protein Caul_5426 [Caulobacter sp. K31] gi|167351815|gb|ABZ74541.1| conserved hypothetical protein [Caulobacter sp. K31] Length = 230 Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust. Identities = 36/169 (21%), Positives = 71/169 (42%), Gaps = 4/169 (2%) Query: 56 LIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLF 115 L+P L + P F + V+T+++ ++E+ + G S ++ P + + +LL +F Sbjct: 5 LLPHYLGLALPVAFFIALFIVITTLSDSSEIDALLAGGRSLTRIVAPFVVIGVLLGLFSV 64 Query: 116 ISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI 175 I ++P R + + A A L F + L L GIFI Sbjct: 65 IVFGYLQPYSRYAFRSVMHAAITAGWNGRLPGRAFVEDGEQLITADESVAAGQALMGIFI 124 Query: 176 VDSRDTQTHKIYYAQSGSI----DLDRQAIILNDGEVHRKSPISKDISI 220 + ++ A S S+ D ++ A++L DG + +D+++ Sbjct: 125 KRPDANKREEVIAASSASLVAEPDGEKVALMLTDGRRTAQDGQGEDLAL 173 >gi|85859085|ref|YP_461287.1| permease [Syntrophus aciditrophicus SB] gi|85722176|gb|ABC77119.1| permease [Syntrophus aciditrophicus SB] Length = 359 Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust. Identities = 36/178 (20%), Positives = 85/178 (47%), Gaps = 8/178 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI R R FL+ L + + ++ +++ ++ + + + +L + IP + Sbjct: 1 MTILDRYISREFLRFFLLVILSFLSLFLIVDFFEKLKMLINYSATFYQILAFFFFRIPMM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + + S+++N+E++ + +G S P+L ++ L+++F F+ + Sbjct: 61 LSLTIPAAVLLSSLLTFGSLSKNSEIVAMRASGVSLYRSSIPILLISFLIALFTFVFSEL 120 Query: 121 IEPKCRSTIKQLS----AKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGI 173 I P + + K ++ F +E +++R +Y ++P +NTL+GI Sbjct: 121 ITPYANEKAEYIRKVEIEKKEIQGIFK--QEQIWYRGTRGIY-NFKLFDPEHNTLRGI 175 >gi|34763639|ref|ZP_00144568.1| Hypothetical Membrane Spanning Protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|294785395|ref|ZP_06750683.1| permease, YjgP/YjgQ family [Fusobacterium sp. 3_1_27] gi|27886692|gb|EAA23836.1| Hypothetical Membrane Spanning Protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|294487109|gb|EFG34471.1| permease, YjgP/YjgQ family [Fusobacterium sp. 3_1_27] Length = 359 Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust. Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 2/174 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YIL + +++ FI + ++ + + S+ +L++ + IP + Sbjct: 1 MKIINKYILDELKGPIILAVFVFTFIFLLDIVVTMMEHIIVKGISVFDVLRLLSFYIPPI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIF-LFISEN 119 L P + T +RN+E + + +TG S ++KP+L +AI SIF +F+ E+ Sbjct: 61 LTQTIPIGMFLGIMICFTKFSRNSESVAMVSTGMSIRDILKPILAIAIGASIFIIFLQES 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI 173 II P+ +K + AK L+E F D+ I + K + + + I Sbjct: 121 II-PRSFIKLKYVGAKIAYENPVFQLKEKTFIDNLDEYSIYVDKVSSDGKAKNI 173 >gi|237741965|ref|ZP_04572446.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13] gi|256845305|ref|ZP_05550763.1| conserved hypothetical protein [Fusobacterium sp. 3_1_36A2] gi|229429613|gb|EEO39825.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13] gi|256718864|gb|EEU32419.1| conserved hypothetical protein [Fusobacterium sp. 3_1_36A2] Length = 359 Score = 43.5 bits (101), Expect = 0.049, Method: Compositional matrix adjust. Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 2/174 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YIL + +++ FI + ++ + + S+ +L++ + IP + Sbjct: 1 MKIINKYILDELKGPIILAVFVFTFIFLLDIVVTMMEHIIVKGISVFDVLRLLSFYIPPI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIF-LFISEN 119 L P + T +RN+E + + +TG S ++KP+L +AI SIF +F+ E+ Sbjct: 61 LTQTIPIGMFLGIMICFTKFSRNSESVAMVSTGMSIRDILKPILAIAIGASIFIIFLQES 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI 173 II P+ +K + AK L+E F D+ I + K + + + I Sbjct: 121 II-PRSFIKLKYVGAKIAYENPVFQLKEKTFIDNLDEYSIYVDKVSSDGKAKNI 173 >gi|325134627|gb|EGC57267.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M13399] Length = 371 Score = 43.5 bits (101), Expect = 0.053, Method: Compositional matrix adjust. Identities = 44/223 (19%), Positives = 104/223 (46%), Gaps = 11/223 (4%) Query: 15 SFLMSCLFIVFIAWVIQILQRINLVSSSTE---SLNILLKISGYLIPTVLPMVTPFCFAM 71 SF +F+V +A V+ Q INL+ + + +++ +L + G+ + + P++ + Sbjct: 12 SFTAVGIFVVLLA-VLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTPLLLVLTAFI 70 Query: 72 ETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP----KCRS 127 T VLT R++E+ + + G + I+PV+ A+ ++ + + + + P + R Sbjct: 71 STLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWVIPWAELRSRE 130 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 + L K +L+L + +L R + +Y + + ++ +F+ + I Sbjct: 131 YAEILKQKQELSLVEAGGFNSLGKR-NGRVYFVETFDTESGIMKNLFLREQDKNGGDNII 189 Query: 188 YAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 +A+ G+ L +++ + L G + +P D + + F+ L Sbjct: 190 FAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNL 232 >gi|189220202|ref|YP_001940842.1| permease [Methylacidiphilum infernorum V4] gi|189187060|gb|ACD84245.1| Predicted permease [Methylacidiphilum infernorum V4] Length = 405 Score = 43.5 bits (101), Expect = 0.053, Method: Compositional matrix adjust. Identities = 29/112 (25%), Positives = 54/112 (48%) Query: 37 NLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSR 96 +L+ ++ L I +K+ LIP VL P+ + + M+++ EL + + G S Sbjct: 71 DLLVNNEVPLWISVKLLVSLIPFVLTFTLPWGLLVAVILLFGKMSQDRELTALKSAGISL 130 Query: 97 ITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEEN 148 ++ PV++ A+L S+ F I PK R K++ + L S+ + N Sbjct: 131 GAIMAPVIWFALLYSVLSFAINAYIGPKSRHAFKEIFSDVMLHNPLSFFKSN 182 >gi|114562103|ref|YP_749616.1| permease YjgP/YjgQ family protein [Shewanella frigidimarina NCIMB 400] gi|114333396|gb|ABI70778.1| permease YjgP/YjgQ family protein [Shewanella frigidimarina NCIMB 400] Length = 370 Score = 43.5 bits (101), Expect = 0.053, Method: Compositional matrix adjust. Identities = 73/361 (20%), Positives = 145/361 (40%), Gaps = 38/361 (10%) Query: 19 SCLFIVFIAWVIQILQRINLVSSSTE-SLNILLKISGYLIPTVLPMVTPFCFAMETTNVL 77 + L ++ ++ Q R+ +S E ++++ + G +P + +V P F + Sbjct: 17 AVLLVLLTIFISQQFVRVLADASDGEFPASLVMTLLGLNLPQLTVLVLPLSFFLAILLAH 76 Query: 78 TSMNRNTELLIIDNTGTS-----RITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQL 132 M E++++ G S R+TL+ L + +++ P Q+ Sbjct: 77 GRMYAENEMVVLHGVGVSEWYVTRVTLLLAFANLLFTAYLSVYVG-----PWAEERQNQV 131 Query: 133 SAKAQLALTFSYLEENLFFRLDDDLYIK-ISKYNPNNTLQGIFIVDSRDTQTH----KIY 187 KAQ + L + F + + + K N +NTL +F+ D + I Sbjct: 132 LEKAQSEAGLAALTQGRFQASPNGRAVLFVEKINKDNTLDKVFVAQLPDPEDENGLTNIV 191 Query: 188 YAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAND 244 A G + ++ Q + L G ++ SP S ++ +++F Y ++ + K + Sbjct: 192 VANKGRVIEDNIGSQQLQLEKGFRYQGSPKSLELQVIEFGGYKMEIKEQEVDERRRKLSA 251 Query: 245 QNLSFLLN-PNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD-KRALVRQR 302 + LL+ P P +EF RL P+ L++++A R VRQ Sbjct: 252 MPIDELLDTPGPEAA-----------AEFQWRLA---IPIAIPLLTLIAVPLARVNVRQG 297 Query: 303 K--KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 K K+ P + FG+ + E P Y+ + ++ F + LL+IK++ T Sbjct: 298 KFAKMGPAILLYLGYFGLMIAGRKALQD-EVVPQYLGMWWIHGFALLLGLLLLIKERPTG 356 Query: 361 I 361 + Sbjct: 357 M 357 >gi|218778207|ref|YP_002429525.1| permease YjgP/YjgQ family protein [Desulfatibacillum alkenivorans AK-01] gi|218759591|gb|ACL02057.1| permease YjgP/YjgQ family protein [Desulfatibacillum alkenivorans AK-01] Length = 398 Score = 43.5 bits (101), Expect = 0.053, Method: Compositional matrix adjust. Identities = 62/287 (21%), Positives = 106/287 (36%), Gaps = 17/287 (5%) Query: 16 FLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTN 75 F ++ L I + ++LQ + V + L ++ + Y +P L V P M Sbjct: 19 FGVTLLVFALIFLMTRMLQLTDYVVNFRVGLGHVMMLLMYSMPFFLIFVIPMSTMMAVLL 78 Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAK 135 M+ + E+ + G S +L+ PVL ++ I P R K+L Sbjct: 79 TFLRMSSDNEITALKAAGWSLYSLLPPVLAFCTAAALLTASMSFIGLPWGRMAAKELLID 138 Query: 136 AQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSRDTQTHKIYYAQSGSI 194 L+E F R ++ + + + + TL +FI D RD Q A +G I Sbjct: 139 VARQNVEIGLKERSFERTFKNVVLYVGSVDVESRTLHHVFIEDRRDKQLSSTIMASTGRI 198 Query: 195 ----DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN---- 246 D + LNDG + R + + F SY + D+ Sbjct: 199 IPSDGDDIWQLRLNDGVIVRADRKKSSMFTVNFDSYDFNLNLGTALGARDGEKDEEEMYF 258 Query: 247 ---LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 L+F+ N + Y LLE HK+ + ++ GL ++ Sbjct: 259 KELLTFVKRYNKKDDRYYLALLEV-----HKKFSIPFSCIVLGLAAV 300 >gi|260642684|ref|ZP_05416897.2| putative permease [Bacteroides finegoldii DSM 17565] gi|260621031|gb|EEX43902.1| putative permease [Bacteroides finegoldii DSM 17565] Length = 632 Score = 43.5 bits (101), Expect = 0.053, Method: Compositional matrix adjust. Identities = 48/215 (22%), Positives = 99/215 (46%), Gaps = 18/215 (8%) Query: 1 MKSFELYILRC-----IGRSFLMSCLFIVFIAWVIQILQRI--NLVSSSTESLNILLKIS 53 +K +++I++ IG F+ CLFI +++Q L R LV E ++++ + Sbjct: 4 IKKLDIFIVKSFFMLFIGTFFI--CLFI----FMMQFLWRYVDELVGKGLE-MSVMAQFF 56 Query: 54 GYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIF 113 Y T++P+ P + + + ELL + G S + +++P++F L Sbjct: 57 FYSALTLVPVSLPLAVLLASLITFGNFGERYELLAMKAAGISLLKIMRPLVFFVCGLVGV 116 Query: 114 LFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQG 172 F +N++ P ++ + L + + E +F+ D +KI+K + L Sbjct: 117 SFYFQNVVGPIAQAKLGTLILSMKQKSPELDIPEGVFYSEIPDYNLKIAKKDRKTGMLYD 176 Query: 173 IFIVDSRDT-QTHKIYYAQSGSIDL--DRQAIILN 204 + I + +D + I YA SG +++ D+Q + L+ Sbjct: 177 VLIYNLKDGFENAHIIYADSGRLEMTADKQHLWLH 211 >gi|90423815|ref|YP_532185.1| permease YjgP/YjgQ [Rhodopseudomonas palustris BisB18] gi|90105829|gb|ABD87866.1| permease YjgP/YjgQ [Rhodopseudomonas palustris BisB18] Length = 362 Score = 43.5 bits (101), Expect = 0.053, Method: Compositional matrix adjust. Identities = 21/88 (23%), Positives = 43/88 (48%) Query: 48 ILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLA 107 ++++ S Y +P +L + PFC + +++R EL++ G S + P L+ A Sbjct: 51 LIVQTSVYRVPQLLERLMPFCILIGAMTCYLALSRRLELVVARAAGISAWQFMAPALWSA 110 Query: 108 ILLSIFLFISENIIEPKCRSTIKQLSAK 135 + L +F + N + + KQ+ A+ Sbjct: 111 LALGVFATVVFNPMSANMQERAKQMEAE 138 >gi|257466753|ref|ZP_05631064.1| hypothetical protein FgonA2_04885 [Fusobacterium gonidiaformans ATCC 25563] Length = 361 Score = 43.5 bits (101), Expect = 0.054, Method: Compositional matrix adjust. Identities = 43/219 (19%), Positives = 97/219 (44%), Gaps = 15/219 (6%) Query: 1 MKSFELYILRCIGRSF---LMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLI 57 MK ++Y+ + + F L S L I ++ V ++L+ +N S + + + G L+ Sbjct: 1 MKKLDIYMTKNFLKYFSYSLFSFLGIFVLSQVFKVLRYVNEGQLSPGQIPLFI---GNLL 57 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 P ++ V P + + M N E++ + +G L++ +F++ L+S+ +F Sbjct: 58 PGIIINVAPLAVLLGGLISINIMASNLEIISLKTSGIRFARLVRGPIFMSFLISLIVFYL 117 Query: 118 ENIIEPKCRSTIKQLSAKAQL-ALTFSYLEENLFFRLDDDLYI----KISKYNPNNTLQG 172 + + P ++L K + +EN FFR + Y+ KI++ + Sbjct: 118 NDRVYPGSVVRNRELRGKEDVEEREVPKEKENAFFRNVEGRYVYYMKKINR--ETGIMDH 175 Query: 173 IFIVDSRDT--QTHKIYYAQSGSIDLDRQAIILNDGEVH 209 + ++D + + ++ A+ G D R+ + D ++ Sbjct: 176 VEVLDMSENFDKIERMITAKKGRYDFKRKLWVFEDAHIY 214 >gi|120599782|ref|YP_964356.1| permease YjgP/YjgQ family protein [Shewanella sp. W3-18-1] gi|120559875|gb|ABM25802.1| permease YjgP/YjgQ family protein [Shewanella sp. W3-18-1] Length = 370 Score = 43.5 bits (101), Expect = 0.055, Method: Compositional matrix adjust. Identities = 79/362 (21%), Positives = 156/362 (43%), Gaps = 34/362 (9%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTE-SLNILLKISGYLIPTVLPMVT 65 Y++R + ++ ++ L ++ ++ Q RI +S E ++++ + G IP ++ +V Sbjct: 6 YLIREVFKA-QIAVLLVLLTIFISQHFVRILADASDGEFPASLIVTLIGLNIPALVVLVL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + M E++I+ G S + + L LA++ +F + P Sbjct: 65 PLSLFLGILVAHGRMYSENEMVILHGVGVSEWYVTRVTLILAVVNMLFTGYLSLYVTPWA 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIK-ISKYNPNNTLQGIFIVD----SRD 180 Q+ KAQ + L + F + + + + +N L+ +F+ S + Sbjct: 125 EEQQNQVLEKAQSEAGLAALVQGRFQASPNGRAVLFVERIGKDNELEKVFVAQLPEPSDE 184 Query: 181 TQTHKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 T + A++G + ++ Q + LN+G ++ SP KD +++F Y +Q + Sbjct: 185 TGVTNVVVAKNGRVLEDNMGAQQLQLNNGVRYQGSPRLKDYQMIEFGGYKMQIKEQQVDE 244 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD-KR 296 K + ++ LL + E E +EFH RL P+ +++++A R Sbjct: 245 RRRKLSALTVTDLL---------KVESAEAV-AEFHWRLA---IPLAIPIMTLIAVPLAR 291 Query: 297 ALVRQRK--KIHPIFISLSISFGVFWGFSYIIHKIEQN---PYYIPILYLFLFC-ISSIF 350 VRQ K K+ P ++ + G F G K Q+ P Y+ + ++ L I IF Sbjct: 292 VNVRQGKFAKMLP---AVLLYLGYF-GLMVAGRKALQDGVIPQYLGMWWIHLSALIMGIF 347 Query: 351 LL 352 LL Sbjct: 348 LL 349 >gi|146292282|ref|YP_001182706.1| permease YjgP/YjgQ family protein [Shewanella putrefaciens CN-32] gi|145563972|gb|ABP74907.1| permease YjgP/YjgQ family protein [Shewanella putrefaciens CN-32] gi|319425582|gb|ADV53656.1| inner membrane component of lipopolysaccharide transporter, LptF [Shewanella putrefaciens 200] Length = 370 Score = 43.5 bits (101), Expect = 0.056, Method: Compositional matrix adjust. Identities = 79/362 (21%), Positives = 156/362 (43%), Gaps = 34/362 (9%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTE-SLNILLKISGYLIPTVLPMVT 65 Y++R + ++ ++ L ++ ++ Q RI +S E ++++ + G IP ++ +V Sbjct: 6 YLIREVFKA-QIAVLLVLLTIFISQHFVRILADASDGEFPASLIVTLIGLNIPALVVLVL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + M E++I+ G S + + L LA++ +F + P Sbjct: 65 PLSLFLGILVAHGRMYSENEMVILHGVGVSEWYVTRVTLILAVVNMLFTGYLSLYVTPWA 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIK-ISKYNPNNTLQGIFIVD----SRD 180 Q+ KAQ + L + F + + + + +N L+ +F+ S + Sbjct: 125 EEQQNQVLEKAQSEAGLAALVQGRFQASPNGRAVLFVERIGKDNELEKVFVAQLPDPSDE 184 Query: 181 TQTHKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 T + A++G + ++ Q + LN+G ++ SP KD +++F Y +Q + Sbjct: 185 TGVTNVVVAKNGRVLEDNMGAQQLQLNNGVRYQGSPRLKDYQMIEFGGYKMQIKEQQVDE 244 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD-KR 296 K + ++ LL + E E +EFH RL P+ +++++A R Sbjct: 245 RRRKLSALTVTDLL---------KVESAEAV-AEFHWRLA---IPLAIPIMTLIAVPLAR 291 Query: 297 ALVRQRK--KIHPIFISLSISFGVFWGFSYIIHKIEQN---PYYIPILYLFLFC-ISSIF 350 VRQ K K+ P ++ + G F G K Q+ P Y+ + ++ L I IF Sbjct: 292 VNVRQGKFAKMLP---AVLLYLGYF-GLMVAGRKALQDGVIPQYLGMWWIHLSALIMGIF 347 Query: 351 LL 352 LL Sbjct: 348 LL 349 >gi|312142844|ref|YP_003994290.1| permease YjgP/YjgQ family protein [Halanaerobium sp. 'sapolanicus'] gi|311903495|gb|ADQ13936.1| permease YjgP/YjgQ family protein [Halanaerobium sp. 'sapolanicus'] Length = 1063 Score = 43.5 bits (101), Expect = 0.057, Method: Compositional matrix adjust. Identities = 50/232 (21%), Positives = 97/232 (41%), Gaps = 6/232 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K + YIL+ + FL+ I I +L+ +++ ++ Y +P V Sbjct: 3 VKLMDKYILKEVSYPFLLGVFIITIILVGSYFFHLADLIIVKNVPFSLVFRLLLYRLPGV 62 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLF-ISEN 119 + P T + +NR E+ + G S L+ P+ L +L+S F F ++EN Sbjct: 63 MVETFPIAVLFATMTAINRLNRENEITALRMGGVSIFRLVLPLFILGLLISSFTFLLNEN 122 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVD- 177 I+ P + + + L E +FF+ +S YN + L+ I I Sbjct: 123 IV-PWTNHQAQNIIRQTILKDAMPDPESEVFFQGPRGRLFYVSSYNQSSGELKNIVIYQL 181 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ 229 + + + ++ A G + + A +LN G +H+ + + I KF ++ Sbjct: 182 ASEAEFPEVITAVDGLV--EDNAWLLNTGIIHQYNQGGEIILESKFNQMEIE 231 >gi|257452882|ref|ZP_05618181.1| hypothetical protein F3_07434 [Fusobacterium sp. 3_1_5R] Length = 361 Score = 43.1 bits (100), Expect = 0.058, Method: Compositional matrix adjust. Identities = 43/219 (19%), Positives = 97/219 (44%), Gaps = 15/219 (6%) Query: 1 MKSFELYILRCIGRSF---LMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLI 57 MK ++Y+ + + F L S L I ++ V ++L+ +N S + + + G L+ Sbjct: 1 MKKLDIYMTKNFLKYFSYSLFSFLGIFVLSQVFKVLRYVNEGQLSPGQIPLFI---GNLL 57 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 P ++ V P + + M N E++ + +G L++ +F++ L+S+ +F Sbjct: 58 PGIIINVAPLAVLLGGLISINIMASNLEIISLKTSGIRFARLVRGPIFMSFLISLIVFYL 117 Query: 118 ENIIEPKCRSTIKQLSAKAQL-ALTFSYLEENLFFRLDDDLYI----KISKYNPNNTLQG 172 + + P ++L K + +EN FFR + Y+ KI++ + Sbjct: 118 NDRVYPGSVVRNRELRGKEDVEEREVPKEKENAFFRNVEGRYVYYMKKINR--ETGIMDH 175 Query: 173 IFIVDSRDT--QTHKIYYAQSGSIDLDRQAIILNDGEVH 209 + ++D + + ++ A+ G D R+ + D ++ Sbjct: 176 VEVLDMSENFDKIERMITAKKGRYDFKRKLWVFEDAHIY 214 >gi|161870424|ref|YP_001599597.1| hypothetical protein NMCC_1472 [Neisseria meningitidis 053442] gi|161595977|gb|ABX73637.1| conserved hypothetical protein [Neisseria meningitidis 053442] Length = 432 Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust. Identities = 44/223 (19%), Positives = 105/223 (47%), Gaps = 11/223 (4%) Query: 15 SFLMSCLFIVFIAWVIQILQRINLVSSSTE---SLNILLKISGYLIPTVLPMVTPFCFAM 71 SF +F+V +A V+ Q INL+ + + +++ +L + G+ + + P++ + Sbjct: 73 SFTAVGIFVVLLA-VLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTPLLLVLTAFI 131 Query: 72 ETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP----KCRS 127 T VLT R++E+ + + G + I+PV+ A+ ++ + + + + P + R Sbjct: 132 STLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWVIPWAELRSRE 191 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 + L K +L+L + +L R + +Y + + ++ +F+ + I Sbjct: 192 YAEILKQKQELSLVEAGGFNSLGKR-NGRVYFVETFDTESGIMKNLFLREQDKNGGDNII 250 Query: 188 YAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 +A+ G S++ +++ + L G + +P D + + F+ L Sbjct: 251 FAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNL 293 >gi|326388616|ref|ZP_08210209.1| permease YjgP/YjgQ [Novosphingobium nitrogenifigens DSM 19370] gi|326206867|gb|EGD57691.1| permease YjgP/YjgQ [Novosphingobium nitrogenifigens DSM 19370] Length = 420 Score = 43.1 bits (100), Expect = 0.061, Method: Compositional matrix adjust. Identities = 43/220 (19%), Positives = 100/220 (45%), Gaps = 10/220 (4%) Query: 18 MSCLFIVFIAWVI--QILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTN 75 M +F++ + ++ ++L+ + V++ + I+ K+ L+P + P + Sbjct: 19 MLSVFVIAASLLVLDKMLKLFDFVATQGGPVGIVFKMLANLMPEYASLAIPLGLMLGILL 78 Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAK 135 + ++EL ++ G S L++ LA +L+ + + ++P R ++L + Sbjct: 79 AFRKLATSSELDVMRAVGLSYTRLLRVPYILAFVLAALNLLIVSYVQPLSRYYYEELQFE 138 Query: 136 AQLALTFSYLEENLFFRLDDDLYIKI-SKYNPNNTLQGIFI-VDSRDTQTHKIYYAQSGS 193 + + ++ F L D +++ S + LQGIF V +D Q + A+ G Sbjct: 139 LRSGALGASIKVGEFNSLQDRTALRVESSRDDGRQLQGIFARVVGKDGQI-LVISAREGQ 197 Query: 194 IDLDRQA-----IILNDGEVHRKSPISKDISIMKFKSYTL 228 +R+ + L DG++ ++SP ++ ++ F S+ L Sbjct: 198 FFANRENPDTVILRLTDGQIVQESPTIRNPRVLTFASHDL 237 >gi|92117864|ref|YP_577593.1| permease YjgP/YjgQ [Nitrobacter hamburgensis X14] gi|91800758|gb|ABE63133.1| permease YjgP/YjgQ [Nitrobacter hamburgensis X14] Length = 365 Score = 43.1 bits (100), Expect = 0.061, Method: Compositional matrix adjust. Identities = 30/130 (23%), Positives = 65/130 (50%), Gaps = 5/130 (3%) Query: 30 IQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLII 89 I++++R + ++S+ S ++ + S + +P +L +TPFC + +++R EL++ Sbjct: 37 IEMVRRTSGLASA--SAIMVAETSLFRVPQLLEKLTPFCVLIGAMTCYLALSRRLELVVA 94 Query: 90 DNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENL 149 G S I P L A++L + + N + R K++ A+ +++ L+E Sbjct: 95 RAAGISAWQFISPALACALVLGVLATTAYNPMSANLRELSKKMEAELFGSVSGGGLQEAS 154 Query: 150 FF---RLDDD 156 F ++ DD Sbjct: 155 GFWINQVTDD 164 >gi|317059424|ref|ZP_07923909.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R] gi|313685100|gb|EFS21935.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R] Length = 362 Score = 43.1 bits (100), Expect = 0.063, Method: Compositional matrix adjust. Identities = 43/219 (19%), Positives = 97/219 (44%), Gaps = 15/219 (6%) Query: 1 MKSFELYILRCIGRSF---LMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLI 57 MK ++Y+ + + F L S L I ++ V ++L+ +N S + + + G L+ Sbjct: 2 MKKLDIYMTKNFLKYFSYSLFSFLGIFVLSQVFKVLRYVNEGQLSPGQIPLFI---GNLL 58 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 P ++ V P + + M N E++ + +G L++ +F++ L+S+ +F Sbjct: 59 PGIIINVAPLAVLLGGLISINIMASNLEIISLKTSGIRFARLVRGPIFMSFLISLIVFYL 118 Query: 118 ENIIEPKCRSTIKQLSAKAQL-ALTFSYLEENLFFRLDDDLYI----KISKYNPNNTLQG 172 + + P ++L K + +EN FFR + Y+ KI++ + Sbjct: 119 NDRVYPGSVVRNRELRGKEDVEEREVPKEKENAFFRNVEGRYVYYMKKINR--ETGIMDH 176 Query: 173 IFIVDSRDT--QTHKIYYAQSGSIDLDRQAIILNDGEVH 209 + ++D + + ++ A+ G D R+ + D ++ Sbjct: 177 VEVLDMSENFDKIERMITAKKGRYDFKRKLWVFEDAHIY 215 >gi|91977435|ref|YP_570094.1| permease YjgP/YjgQ [Rhodopseudomonas palustris BisB5] gi|91683891|gb|ABE40193.1| permease YjgP/YjgQ [Rhodopseudomonas palustris BisB5] Length = 361 Score = 43.1 bits (100), Expect = 0.064, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 4/115 (3%) Query: 21 LFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSM 80 + +VF+ + I +L+R ++ S ++ + S Y +P +L + PFC + ++ Sbjct: 27 VLLVFVDY-IDLLRRAGGLAVSA---LVIAQASFYRVPQLLERLMPFCILIGGMTCYLAL 82 Query: 81 NRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAK 135 +R+ EL+I G S + P L+ A+ L +F N + + KQ+ A+ Sbjct: 83 SRSLELVIARAAGLSAWEFVSPALWSALALGVFASAVFNPMSAYMQERAKQMEAE 137 >gi|315917902|ref|ZP_07914142.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC 25563] gi|313691777|gb|EFS28612.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC 25563] Length = 362 Score = 43.1 bits (100), Expect = 0.064, Method: Compositional matrix adjust. Identities = 43/219 (19%), Positives = 97/219 (44%), Gaps = 15/219 (6%) Query: 1 MKSFELYILRCIGRSF---LMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLI 57 MK ++Y+ + + F L S L I ++ V ++L+ +N S + + + G L+ Sbjct: 2 MKKLDIYMTKNFLKYFSYSLFSFLGIFVLSQVFKVLRYVNEGQLSPGQIPLFI---GNLL 58 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 P ++ V P + + M N E++ + +G L++ +F++ L+S+ +F Sbjct: 59 PGIIINVAPLAVLLGGLISINIMASNLEIISLKTSGIRFARLVRGPIFMSFLISLIVFYL 118 Query: 118 ENIIEPKCRSTIKQLSAKAQL-ALTFSYLEENLFFRLDDDLYI----KISKYNPNNTLQG 172 + + P ++L K + +EN FFR + Y+ KI++ + Sbjct: 119 NDRVYPGSVVRNRELRGKEDVEEREVPKEKENAFFRNVEGRYVYYMKKINR--ETGIMDH 176 Query: 173 IFIVDSRDT--QTHKIYYAQSGSIDLDRQAIILNDGEVH 209 + ++D + + ++ A+ G D R+ + D ++ Sbjct: 177 VEVLDMSENFDKIERMITAKKGRYDFKRKLWVFEDAHIY 215 >gi|294637821|ref|ZP_06716093.1| inner membrane protein YjgP [Edwardsiella tarda ATCC 23685] gi|291089020|gb|EFE21581.1| inner membrane protein YjgP [Edwardsiella tarda ATCC 23685] Length = 366 Score = 43.1 bits (100), Expect = 0.065, Method: Compositional matrix adjust. Identities = 45/236 (19%), Positives = 91/236 (38%), Gaps = 15/236 (6%) Query: 47 NILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFL 106 N++ + G IP + ++ P + L + +E+ ++ G + LIK + L Sbjct: 46 NLVFSLLGLGIPEMAQLILPLSLFLGLLMTLGRLYTESEITVMHACGLGKSVLIKAAMVL 105 Query: 107 AILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP 166 A + + P ++ A+A+ + L E F D Y+ Sbjct: 106 AFFTGALALANAFWLSPWSSLHSDEVMAEAKANPGLASLAEGQFQPSQDGNYVLFVGNVK 165 Query: 167 NNTLQGIFIVDSRDTQTHK--IYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIM 221 + +F+ R + + + + A SG + Q ++L+ G + + + +D I Sbjct: 166 DKKFHDVFLAQLRPSGSQRPSVVVADSGHLVEMKDGGQKVVLDSGTRYEGTAMLRDFRIT 225 Query: 222 KFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLT 277 F Y+ + ST++ N S + + P ++R+EFH RLT Sbjct: 226 DFVDYSALI--GHKSTMLDPNNADQASMSALWHSDEP--------SFRAEFHWRLT 271 >gi|224825295|ref|ZP_03698400.1| permease YjgP/YjgQ family protein [Lutiella nitroferrum 2002] gi|224602216|gb|EEG08394.1| permease YjgP/YjgQ family protein [Lutiella nitroferrum 2002] Length = 366 Score = 43.1 bits (100), Expect = 0.067, Method: Compositional matrix adjust. Identities = 48/222 (21%), Positives = 95/222 (42%), Gaps = 10/222 (4%) Query: 15 SFLMSCLFIVFIAWVIQILQRINLVSSSTESL---NILLKISGYLIPTVLPMVTPFCFAM 71 +F +F+V +A ++ Q INL+ + E + + G+ + P++ + Sbjct: 12 TFTAVSVFVVLLA-ILVTTQTINLLGRAAEGRIANEAVAALIGFWTLGLFPLLLILTVFI 70 Query: 72 ETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQ 131 VLT + R+ E+ + +G S +KPVL A+ L+I + IS +I P + Sbjct: 71 SVLVVLTRLWRDHEMAVWLASGVSLKDWVKPVLRFAVPLAILVGISSLLIGPWAEQRSHE 130 Query: 132 LSAKAQLALTFSYLEENLFFRLDDD--LYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYA 189 + + S + +F +Y + N + IF+ D + I +A Sbjct: 131 YAEILKQHEDVSAISPGIFKESHSSRRVYFVENFSGKNGSAANIFMQDMSKGKVASI-FA 189 Query: 190 QSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTL 228 +SG I + Q ++L +G + +P D + +F Y++ Sbjct: 190 KSGRIVTNEQGERLLLLENGRRYVGNPGEADYEVAEFARYSV 231 >gi|87302818|ref|ZP_01085629.1| possible permease [Synechococcus sp. WH 5701] gi|87282701|gb|EAQ74659.1| possible permease [Synechococcus sp. WH 5701] Length = 401 Score = 43.1 bits (100), Expect = 0.067, Method: Compositional matrix adjust. Identities = 41/191 (21%), Positives = 89/191 (46%), Gaps = 14/191 (7%) Query: 32 ILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDN 91 + + + V+ S L L++ G +P L + P M T ++++ N+EL+ + + Sbjct: 59 VFELVRRVAESGLPLLTALQVLGLRMPGFLVLSFPMATLMATLLAYSTLSSNSELIALRS 118 Query: 92 TGTSRITLIKPVLFLAILLSIFLFISENIIEP----KCRSTIKQLSAKAQLALTFSYLEE 147 G S ++ P L +A+L+S+ F+ ++I P + +T+ Q KA A S + Sbjct: 119 VGVSTWRMVLPALIVAVLMSLLTFVFNDLIVPSANLEATNTLNQALGKAIAAEKGSNIIY 178 Query: 148 NLFFR----LDD---DLYIK---ISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLD 197 + F R LD+ + Y+ S+ + ++ + ++D +I A++G+ + + Sbjct: 179 SRFSRRPSKLDESGSERYLSQLFYSRQFKDGEMEEVTVLDFSRPSGTQILKAKTGTWNDE 238 Query: 198 RQAIILNDGEV 208 DG++ Sbjct: 239 AGMWEFRDGQI 249 >gi|268315816|ref|YP_003289535.1| permease YjgP/YjgQ family protein [Rhodothermus marinus DSM 4252] gi|262333350|gb|ACY47147.1| permease YjgP/YjgQ family protein [Rhodothermus marinus DSM 4252] Length = 481 Score = 43.1 bits (100), Expect = 0.070, Method: Compositional matrix adjust. Identities = 40/201 (19%), Positives = 87/201 (43%), Gaps = 8/201 (3%) Query: 15 SFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETT 74 + + +F++ + ++I+ L +LV L ++L++ Y + ++ + P + Sbjct: 18 GWFGTLMFLLIMQFLIKYLP--DLVGKGL-PLGVILELISYNLAYMVVLAVPMATLIAMI 74 Query: 75 NVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSA 134 + + +I + G S L P+L + ++L+ + N+I P+ + L Sbjct: 75 MTFGRLAESNAYQVIKSAGISLPQLTWPLLIVGLVLTGAMMYFNNLILPEANHRARNLWI 134 Query: 135 KAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSRDTQTHKIYYAQSGS 193 Q L+ +F+ + I + +P ++L+ + I D R++ H + AQ G Sbjct: 135 DIQRKKPGFQLQPGVFYDGIEGYSILVQHRDPETDSLRDVTIYDYRNSGEHAVLKAQRGL 194 Query: 194 IDLDRQA----IILNDGEVHR 210 + +IL DGE HR Sbjct: 195 LQPIAGGRFIDLILEDGEFHR 215 >gi|313674336|ref|YP_004052332.1| permease yjgp/yjgq family protein [Marivirga tractuosa DSM 4126] gi|312941034|gb|ADR20224.1| permease YjgP/YjgQ family protein [Marivirga tractuosa DSM 4126] Length = 549 Score = 43.1 bits (100), Expect = 0.075, Method: Compositional matrix adjust. Identities = 27/125 (21%), Positives = 54/125 (43%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + ILR FL++ +VFI +L+ + ++ ++ Y + Sbjct: 1 MKKIDKLILRSFIGPFLITFFVVVFILLTQYMLKYFDDFVGKDLGFSVFAELIAYFSINM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 P+ P + + ++ + EL I + G S + +++P+ + LS ++ S N Sbjct: 61 TPIAFPLAVLLSSLMTFGNLGEHFELTAIKSAGISLVRVLRPLFVFVVCLSAVVYYSNNF 120 Query: 121 IEPKC 125 I PK Sbjct: 121 IVPKA 125 >gi|27379217|ref|NP_770746.1| permease [Bradyrhizobium japonicum USDA 110] gi|27352368|dbj|BAC49371.1| bll4106 [Bradyrhizobium japonicum USDA 110] Length = 363 Score = 43.1 bits (100), Expect = 0.075, Method: Compositional matrix adjust. Identities = 26/115 (22%), Positives = 55/115 (47%), Gaps = 3/115 (2%) Query: 21 LFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSM 80 L +V + ++ + + L S+S ++ + S + +P +L +TPFC + ++ Sbjct: 27 LLLVLVDYIEMVRKTSGLASASA---IMVAETSLFRVPQLLEKLTPFCMLIGAMTCYLAL 83 Query: 81 NRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAK 135 +R EL++ G S I P L A+L+ + ++ N + R K++ A+ Sbjct: 84 SRRLELVVARAAGVSAWQFISPALGSALLIGVIATVAYNPMSANLRELSKRMEAE 138 >gi|170746989|ref|YP_001753249.1| permease YjgP/YjgQ family protein [Methylobacterium radiotolerans JCM 2831] gi|170653511|gb|ACB22566.1| permease YjgP/YjgQ family protein [Methylobacterium radiotolerans JCM 2831] Length = 363 Score = 42.7 bits (99), Expect = 0.078, Method: Compositional matrix adjust. Identities = 57/273 (20%), Positives = 108/273 (39%), Gaps = 24/273 (8%) Query: 30 IQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLII 89 +++L+R + S ++ ++S Y P V V PF + L ++R EL++ Sbjct: 37 VELLRRAG--EAQGASAGLMAQLSLYRTPAVAEGVLPFAVLFGSMAALLQLSRKLELVVA 94 Query: 90 DNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENL 149 G S ++P LF+A+ L N + + ++ AK T + ++L Sbjct: 95 RAAGISAWQFLQPGLFVALALGALAVGVYNPVSAMLKQRSTEIEAKIFAKSTKASSGKDL 154 Query: 150 FFR---LDDDLYIKI-SKYNPNNTLQG--IFIVDSRDTQTHKIYYAQSGSIDLDRQAIIL 203 + R LD + ++ + TL G +F D+ ++ A++ +L Sbjct: 155 WIRQKGLDGEAILRAETAVEGTTTLAGVSVFTFDAAGKFAEQLVAARA----------ML 204 Query: 204 NDG--EVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYR 261 +DG E+ ++ D F +Y + + +++ F P R Sbjct: 205 HDGYWELSDVRVLTPDAPPESFDTYLIASNLDPGQVRQRFTPPESVPFWQLPTTIARTER 264 Query: 262 PELLET-YRSEFHKRLTQWLFPVIFGLISIVAA 293 L T YR ++ W PV+F + IVAA Sbjct: 265 AGLDATRYRLQYD---VLWARPVLFVAMVIVAA 294 >gi|294678215|ref|YP_003578830.1| permease YjgP/YjgQ family protein [Rhodobacter capsulatus SB 1003] gi|294477035|gb|ADE86423.1| permease YjgP/YjgQ family protein [Rhodobacter capsulatus SB 1003] Length = 366 Score = 42.7 bits (99), Expect = 0.081, Method: Compositional matrix adjust. Identities = 30/152 (19%), Positives = 71/152 (46%), Gaps = 2/152 (1%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + LYI R G++FL+ + ++I+++++I + + +L+ ++ +P+ L Sbjct: 2 TLSLYIARRFGQAFLIVAGAFWGVLFLIEMVEQIRRLDPARGALSDAAHLAALSVPSTLY 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + + R++EL++I G S + ++ + +A+L+ + L N I Sbjct: 62 TIFPLVVMLSGVVAFLGLARSSELVVIRAAGRSALRMLLAPVTVALLIGVLLVAVGNPIV 121 Query: 123 PKCRSTIKQLSA--KAQLALTFSYLEENLFFR 152 +++ +A+ T S E L+ R Sbjct: 122 SATSKRAEEIEGQLRAEGRQTVSIGREGLWMR 153 >gi|326561253|gb|EGE11612.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis 46P47B1] Length = 437 Score = 42.7 bits (99), Expect = 0.084, Method: Compositional matrix adjust. Identities = 43/227 (18%), Positives = 94/227 (41%), Gaps = 26/227 (11%) Query: 22 FIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMN 81 F+V I ++++ + + ++ +L ++ GY P L ++ P F + V + Sbjct: 76 FLVVILLGGRLIRYFGMAAEGGLNVGVLFRLIGYNFPYFLELILPLSFFIGLMLVFGRLY 135 Query: 82 RNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALT 141 + E+ +++ +G SR + + ++ L ++L + +P + + +A Sbjct: 136 TDHEMTVMNASGISRGRVARLLMPLVVVLMCIEGWVSMVAKPWGMERATNIWQEQSVAQV 195 Query: 142 FSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIV--------DSRDTQTHK---IYYA 189 F + F DD ++ + + N L+ + I+ D + Q+H+ I +A Sbjct: 196 FDLIRPQEFIS-SDDYHLYVGEMGANREFLKDVIIIQMHTAEPSDIQSRQSHQRDSIIFA 254 Query: 190 QS--------GSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 +S G I LD L G + P S+ S + F+ Y + Sbjct: 255 KSATHVETGNGQIQLD-----LQQGRRYEVDPTSRQYSQIGFERYRM 296 >gi|72382010|ref|YP_291365.1| putative permease [Prochlorococcus marinus str. NATL2A] gi|72001860|gb|AAZ57662.1| unclassified ABC-type transport system permease [Prochlorococcus marinus str. NATL2A] Length = 395 Score = 42.7 bits (99), Expect = 0.085, Method: Compositional matrix adjust. Identities = 49/208 (23%), Positives = 86/208 (41%), Gaps = 18/208 (8%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 +P+ + + P + T S+N N+E+ + + G S LI P L L+I +S FI Sbjct: 79 LPSFVVISFPMAMLLSTLLAYGSLNDNSEIKALKSIGISVYRLILPGLILSIFMSYMTFI 138 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLE-ENLFFRLDDDLYIKISKYNPNNT------ 169 N I P + + A + L +F+ + E++ F ++ S Y N Sbjct: 139 FNNNIVPSTNKNAEIILANS-LGRSFANEQGEDIIFSKKGEILDPYSSYKKNGVTHLFYA 197 Query: 170 -------LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK 222 + + ++D ++ A+ G + D+ +G++ SP + K Sbjct: 198 WKFIDGQMLDVTVIDFSKLGFTQMLKAKKGIWNSDKNNWEFFEGDILTLSPDGSNTRT-K 256 Query: 223 FKS--YTLQTESANSSTIVLKANDQNLS 248 F S Y L TE N + + AND NL Sbjct: 257 FLSFLYPLGTELTNIAQLPKDANDMNLG 284 >gi|332284928|ref|YP_004416839.1| hypothetical protein PT7_1675 [Pusillimonas sp. T7-7] gi|330428881|gb|AEC20215.1| hypothetical protein PT7_1675 [Pusillimonas sp. T7-7] Length = 371 Score = 42.7 bits (99), Expect = 0.087, Method: Compositional matrix adjust. Identities = 40/204 (19%), Positives = 85/204 (41%), Gaps = 6/204 (2%) Query: 39 VSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRIT 98 ++ T N++ ++ + T LP++ + +T R +E+++ +G S Sbjct: 39 AANGTIGANVVFGLATFSSITALPVILSVSLFIAVLTTVTRNFRESEMVVWFASGLSLKD 98 Query: 99 LIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLY 158 I+PVL A+ ++I + + + P I + + + S + F +D Sbjct: 99 WIRPVLRCAVPVAIIIAVLTLVASPWAYRQISEYRQRFEQRSDLSKVTAGQFIETEDGAR 158 Query: 159 IKISKYNPNNTLQGIFIVDSR--DTQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSP 213 + ++ PN + + V +R + + A+S I + ++L DG + P Sbjct: 159 VFFAE-EPNEPGEEMGNVIARVVTPEWLSVVTAESARIQTEENGDRFLVLTDGHRYDLKP 217 Query: 214 ISKDISIMKFKSYTLQTESANSST 237 D +M+F SY + ES S + Sbjct: 218 DMPDFRLMEFDSYGFRLESNASES 241 >gi|330994316|ref|ZP_08318244.1| putative permease [Gluconacetobacter sp. SXCC-1] gi|329758783|gb|EGG75299.1| putative permease [Gluconacetobacter sp. SXCC-1] Length = 410 Score = 42.7 bits (99), Expect = 0.096, Method: Compositional matrix adjust. Identities = 37/190 (19%), Positives = 78/190 (41%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + + Y+LR + F ++ ++ + ++L NL++++ S+ + LIP L Sbjct: 18 TMDRYLLRQVVPPFSIALGVVMAALLLERLLVLFNLLAANGSSMKTFFALLSDLIPHYLG 77 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + +V+ M+ N E+ + +G S + +P + + F I+ Sbjct: 78 LALPAAMCVSVFSVIRRMSANHEIDALMASGVSIFRICQPFVLTGAIFGFLAFSLYGFIQ 137 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P R + A A +L+ +F DD + + + + + +FI D D Sbjct: 138 PYARYDYRSAFYFASHAGWTPHLQSKMFALSDDIVLTAENVDHAGSRMWNVFIRDGTDKA 197 Query: 183 THKIYYAQSG 192 + AQ G Sbjct: 198 HVRFISAQKG 207 >gi|86749599|ref|YP_486095.1| permease YjgP/YjgQ [Rhodopseudomonas palustris HaA2] gi|86572627|gb|ABD07184.1| permease YjgP/YjgQ [Rhodopseudomonas palustris HaA2] Length = 361 Score = 42.7 bits (99), Expect = 0.098, Method: Compositional matrix adjust. Identities = 35/139 (25%), Positives = 62/139 (44%), Gaps = 14/139 (10%) Query: 8 ILRCIGR----SFLMSCLFIVFIAWV-------IQILQRINLVSSSTESLNILLKISGYL 56 +L +GR F+ S L + F +V I +L+R +S S ++ + S + Sbjct: 2 VLNTLGRYFAARFVSSALGVFFGLFVLLVFVDYIDLLRRAGGLSVSA---FVIAQASFFR 58 Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 +P +L + PFC + +++R EL+I G S I P L+ A+ L +F Sbjct: 59 VPQLLERLLPFCILIGGMTCYLALSRRLELVIARAAGLSAWQFIAPALWSALALGVFASA 118 Query: 117 SENIIEPKCRSTIKQLSAK 135 N + + KQ+ A+ Sbjct: 119 VFNPMSAYMQERAKQMEAE 137 >gi|255009764|ref|ZP_05281890.1| putative permease [Bacteroides fragilis 3_1_12] gi|313147551|ref|ZP_07809744.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313136318|gb|EFR53678.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 634 Score = 42.7 bits (99), Expect = 0.098, Method: Compositional matrix adjust. Identities = 42/202 (20%), Positives = 92/202 (45%), Gaps = 9/202 (4%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 ++L +G F+ CLFI + ++ + + LV E +++L + Y +++PM P Sbjct: 15 FLLLFVGTFFI--CLFIFMMQFLWKYVDE--LVGKGLE-MSVLAQFFFYSALSLVPMSLP 69 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + + + ELL + G S + +++P++ L + F +N+I P+ + Sbjct: 70 LAVLLASLITFGNFGERFELLAMKAAGISLLKIMRPLIVLVFAICCVSFYFQNVIGPRAQ 129 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVD-SRDTQTH 184 + + L + + E +F+ D +K+ + + L + I D S + Sbjct: 130 AKLGTLLISMKQKSPEVDIPEGVFYDEIDGYNLKVQRKDRKTGMLYDVIIYDFSNNFDNA 189 Query: 185 KIYYAQSGSIDL--DRQAIILN 204 +I A SG +++ D+Q + L+ Sbjct: 190 RIIVADSGRLEMTADKQHLYLH 211 >gi|254527024|ref|ZP_05139076.1| unclassified ABC-type transport system permease [Prochlorococcus marinus str. MIT 9202] gi|221538448|gb|EEE40901.1| unclassified ABC-type transport system permease [Prochlorococcus marinus str. MIT 9202] Length = 401 Score = 42.7 bits (99), Expect = 0.098, Method: Compositional matrix adjust. Identities = 43/196 (21%), Positives = 83/196 (42%), Gaps = 20/196 (10%) Query: 50 LKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAIL 109 LK+ + +P+ L + P + T ++ N+ELL + + G +I P + L+I Sbjct: 73 LKVLFFSLPSFLVLSFPMAVLLSTLLAYGKLSSNSELLALKSLGIKTSRIIAPAIALSIF 132 Query: 110 LSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLE--ENLFF-RLDDDLYIKISKYNP 166 ++ F + + PK + + + + +A + +FS E EN+ F R + K Sbjct: 133 MTGLTFYFNDNLVPKS-NKLAEATLRAGIGSSFSEEEGKENIMFSRYGSRINASTKKPTK 191 Query: 167 NNT---------------LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRK 211 NN+ ++ + ++D +I A S D + I + G + Sbjct: 192 NNSKLTHIFYAQWYKNKLMENVTLLDFSREDLQQILKADSARFDKKNSSWIFSKGSIVSI 251 Query: 212 SPISKDISIMKFKSYT 227 +P + +I KFK YT Sbjct: 252 TPSGQTTNI-KFKEYT 266 >gi|254303140|ref|ZP_04970498.1| possible ABC superfamily ATP binding cassette transporter membrane protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323332|gb|EDK88582.1| possible ABC superfamily ATP binding cassette transporter membrane protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 359 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 42/174 (24%), Positives = 80/174 (45%), Gaps = 2/174 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YIL + +++ FI + ++ + + S+ +L++ + IP + Sbjct: 1 MKIINKYILDELKGPIILAVFVFTFIFLLDIVVTMMEHIIVKGISVFDVLRLLSFYIPPI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIF-LFISEN 119 L P + T +RN+E + + +TG S ++KP+L +AI SIF +F+ E+ Sbjct: 61 LTQTIPIGMFLGIMICFTKFSRNSESVAMVSTGMSIRDILKPILAIAIGASIFIIFLQES 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI 173 II P+ +K + AK L+E F D+ I + + + + + I Sbjct: 121 II-PRSFIKLKYVGAKIAYENPVFQLKEKTFIDNLDEYSIYVDEVDSDGKAKNI 173 >gi|294782104|ref|ZP_06747430.1| permease, YjgP/YjgQ family [Fusobacterium sp. 1_1_41FAA] gi|294480745|gb|EFG28520.1| permease, YjgP/YjgQ family [Fusobacterium sp. 1_1_41FAA] Length = 359 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 43/184 (23%), Positives = 81/184 (44%), Gaps = 2/184 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YIL + +++ FI + ++ + + S+ +L++ + IP + Sbjct: 1 MKIINKYILDELKGPIILAVFVFTFIFLLDIVVTMMEHIIVKGISVFDVLRLLSFYIPPI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIF-LFISEN 119 L P + T +RN+E + + +TG S ++KP+L +AI +IF LF+ E+ Sbjct: 61 LTQTIPIGMFLGIMICFTKFSRNSESVAMVSTGMSIRAILKPILAIAIGSAIFILFLQES 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 II P+ +K + K L+E F D I + K + + I + Sbjct: 121 II-PRSFVKLKYVGTKIAYENPVFQLKEKTFIDNLDQYSIYVDKVESDGKAKNIIAFEKP 179 Query: 180 DTQT 183 + +T Sbjct: 180 EDKT 183 >gi|332307891|ref|YP_004435742.1| permease YjgP/YjgQ family protein [Glaciecola agarilytica 4H-3-7+YE-5] gi|332175220|gb|AEE24474.1| permease YjgP/YjgQ family protein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 353 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 52/275 (18%), Positives = 115/275 (41%), Gaps = 17/275 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K + YI R + + MS +V ++ +I+ ++++ V + + + +P Sbjct: 2 IKILDWYIARTLLSTTAMSLGVLVGLSALIKFIEQMKSVGRGSYDMTVAAVYVFLSLPRE 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + + + N+EL+++ + G SR +I + AIL+ +F+ + Sbjct: 62 LEQFFPMATLIGGLIGMGILASNSELVVMQSAGQSRWNIIISAMKSAILMVLFVMVIGEW 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SR 179 + P + K++ +A + + + L + D D ++ I + N L+ + I + Sbjct: 122 VAPISETKAKEIRTQAISGGSL-FSSDRLVWAKDGDNFVSIGEVVDKNNLRDVSIYEFDN 180 Query: 180 DTQTHKIYYAQSGSIDLDR------QAIILNDGEVH----RKSPISKDISIMKFKSYTLQ 229 D KI A++ + D Q+ +D +H S ++ K T++ Sbjct: 181 DLYLRKITTAEAANYQSDSWELSHVQSTEFSDNRIHVEDAADGAWSSSLTPDKLGVVTVK 240 Query: 230 TESANSSTIVLKANDQNLSFLLNPNPNNPNYRPEL 264 E+ + ++ N +L N + N+ YR L Sbjct: 241 PEALSIRGLIDYVN-----YLENNSQNSERYRLAL 270 >gi|319788014|ref|YP_004147489.1| permease YjgP/YjgQ family protein [Pseudoxanthomonas suwonensis 11-1] gi|317466526|gb|ADV28258.1| permease YjgP/YjgQ family protein [Pseudoxanthomonas suwonensis 11-1] Length = 361 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 56/235 (23%), Positives = 106/235 (45%), Gaps = 33/235 (14%) Query: 82 RNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALT 141 R++E+ +++ G L++P+L + + + + + + P + T + +A +L Sbjct: 82 RDSEMAVLNAVGVGPKRLLRPLLMAVVPVVVAVGMCSLWLGPWAQRTAANMIEQANRSLI 141 Query: 142 FSYLEENLFFRLDDD---LYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDL-- 196 + LE F L + +YI + TLQG+F+ RD + + A++GS++ Sbjct: 142 VAGLEPGRFTSLPNGGGIVYIDGMSED-GRTLQGVFLQRERDGRVD-VVTARTGSLEFGG 199 Query: 197 DRQAII-LNDGEVHRKSPISK--DISIMKFKSYTLQTESANSSTIVLKANDQ-----NLS 248 DR + L DG + P+ + D +M++ E A +A+D LS Sbjct: 200 DRDRFLRLADGR-RLEGPLEQGLDFRLMRYAV----NEVALPDRAEERADDDPAIAPTLS 254 Query: 249 FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 L N + RP + +E H RLT L + F L+++ A R+ RQ++ Sbjct: 255 -LFN------DGRPAAI----AELHGRLTPPLMALAFALLTVPLA--RSSPRQQR 296 >gi|228472915|ref|ZP_04057672.1| permease [Capnocytophaga gingivalis ATCC 33624] gi|228275497|gb|EEK14274.1| permease [Capnocytophaga gingivalis ATCC 33624] Length = 477 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 59/266 (22%), Positives = 117/266 (43%), Gaps = 29/266 (10%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL +F+ S L I+ I I ++ + S +++K ++P + Sbjct: 1 MKILDRYILSRFIFNFISSFLIIMVIFIFQTIWLYVDELVGRGLSFLVVIKFIALMLPNL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P++ P + + L + + EL + +G S + + ++ +LLSI +F + N Sbjct: 61 IPLILPLTVVLSSIMTLGAFGESYELAAMKASGVSLLKATRMLILFMVLLSIGVFFTFNN 120 Query: 121 IEP-------KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT--LQ 171 ++P R +IK + + LA++ + +F + D IK++K N L Sbjct: 121 LQPWSNRKFVALRDSIK--NKQPSLAIS-----QGIFNNV-QDFSIKVAKKTGENEQYLH 172 Query: 172 GIFIVD-SRDTQTHKIYYAQSGSIDLDRQA-----IILNDGEVHR-----KSPISKDISI 220 I I + T + A++G + ++ +IL DG + KS I+ Sbjct: 173 DIVIHKVGINGDTRTVIKAKNGELSGHKKGSDVLQLILKDGSYYEDVYNDKSDITFPFVK 232 Query: 221 MKFKSYTLQTE-SANSSTIVLKANDQ 245 KF+++ L + SA ++ I N + Sbjct: 233 AKFETHVLNIDISALNADITYDENAE 258 >gi|237756215|ref|ZP_04584779.1| putative membrane protein [Sulfurihydrogenibium yellowstonense SS-5] gi|237691625|gb|EEP60669.1| putative membrane protein [Sulfurihydrogenibium yellowstonense SS-5] Length = 336 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 30/176 (17%) Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC- 125 F F + V S+ E+ + + G S+ L+KPV + ++ I F+ +I P Sbjct: 65 FAFFISWLLVGISLRDKNEIYAVYSAGISKKQLLKPVFIMTVIFVIIAFVFSTVIVPSAN 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENL----FFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 R K L+ K + SY+ EN+ F +++D++ + + K NT I Sbjct: 125 RERYKFLTYKVK-----SYILENVSPKNFSKINDNVSVYVEK-KEKNTFYNIL------- 171 Query: 182 QTHKIYYAQSGSIDLDRQA------IILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 IY A SG + ++ +IL DG + P K +K++ YT + Sbjct: 172 ----IYNASSGYLITAKEGMFISNNLILKDGYIQL--PSGKSFDTIKYEKYTFSLD 221 >gi|34498370|ref|NP_902585.1| hypothetical protein CV_2915 [Chromobacterium violaceum ATCC 12472] gi|34104224|gb|AAQ60583.1| conserved hypothetical protein [Chromobacterium violaceum ATCC 12472] Length = 368 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 54/254 (21%), Positives = 105/254 (41%), Gaps = 12/254 (4%) Query: 20 CLFIVFIAWVIQILQRINLVSSSTESL---NILLKISGYLIPTVLPMVTPFCFAMETTNV 76 +F+V +A +I Q INL+ + E + + G+ P++ + V Sbjct: 17 GVFVVLLA-IIVSTQAINLLGRAAEGQIANEAVTALIGFWTLGFFPVLMILTVFVSVLVV 75 Query: 77 LTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKA 136 LT R+ E+++ + G S + P++ + L+I + + P + + Sbjct: 76 LTRTWRDHEMVVWLSAGLSLRDWVWPIMRFTLPLAILIAGVTLFVGPWADQRSQDYAEII 135 Query: 137 QLALTFSYLEENLFFRLDDDLYIK-ISKYNP-NNTLQGIFIVDSRDTQTHKIYYAQSGSI 194 + S + +F + I Y+ ++ IF+ D D + I+ A+ G I Sbjct: 136 KRREEISAISPGVFKESASSSKVYFIENYSGLHSAATNIFMQDMTDGKVSTIF-AKHGYI 194 Query: 195 DL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNL-SFL 250 + + ++L DG+ + P D I +FK YT + + T +N Q++ + + Sbjct: 195 SIKPDGERVLVLEDGKRYVGEPGQADYQIGEFKRYTASLGDSQAVT-GPASNRQSIPTSV 253 Query: 251 LNPNPNNPNYRPEL 264 L NP YR EL Sbjct: 254 LLAGSGNPEYRAEL 267 >gi|170692022|ref|ZP_02883186.1| permease YjgP/YjgQ family protein [Burkholderia graminis C4D1M] gi|170143306|gb|EDT11470.1| permease YjgP/YjgQ family protein [Burkholderia graminis C4D1M] Length = 365 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 36/166 (21%), Positives = 75/166 (45%), Gaps = 14/166 (8%) Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLA----ILLSIFLFISENIIEPKCRSTIKQ 131 VLT +++E+++ ++G S IKP+ A IL+ F+F+ P K Sbjct: 75 VLTRWYKDSEMVVWLSSGVSLTRFIKPIGMFATPIIILICFFVFVGW----PWSNQQSKM 130 Query: 132 LSAKAQLALTFSYLEENLFFRLDDDLYIK-ISKYNPNNT-LQGIFIVDSRDTQTHKIYYA 189 + A+ Q S L F + I K +P+ ++ +F+ + + + + + + Sbjct: 131 IRARFQQRDEVSLLAPGQFRESASSHRVFFIEKMSPDQGHVENVFVTSTENGKVN-VVVS 189 Query: 190 QSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 ++G + + ++L +G + P D IM+F+ Y ++ ES Sbjct: 190 KNGHTETHKNGDRFVVLENGRRYEGEPGHPDFRIMEFERYGVKIES 235 >gi|253564060|ref|ZP_04841517.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|251947836|gb|EES88118.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|301161640|emb|CBW21180.1| putative permease [Bacteroides fragilis 638R] Length = 636 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 42/202 (20%), Positives = 92/202 (45%), Gaps = 9/202 (4%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 ++L +G F+ CLFI + ++ + + LV E +++L + Y +++PM P Sbjct: 15 FLLLFVGTFFI--CLFIFMMQFLWKYVDE--LVGKGLE-MSVLAQFFFYSALSLVPMSLP 69 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + + + ELL + G S + +++P++ L + F +N+I P+ + Sbjct: 70 LAVLLASLITFGNFGERFELLAMKAAGISLLKIMRPLIVLVFAICCVSFYFQNVIGPQAQ 129 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVD-SRDTQTH 184 + + L + + E +F+ D +K+ + + L + I D S + Sbjct: 130 AKLGTLLISMKQKSPEVDIPEGVFYDEIDGYNLKVQRKDRKTGMLYDVIIYDFSNNFDNA 189 Query: 185 KIYYAQSGSIDL--DRQAIILN 204 +I A SG +++ D+Q + L+ Sbjct: 190 RIIVADSGRLEMTADKQHLYLH 211 >gi|83594405|ref|YP_428157.1| permease YjgP/YjgQ [Rhodospirillum rubrum ATCC 11170] gi|83577319|gb|ABC23870.1| permease YjgP/YjgQ [Rhodospirillum rubrum ATCC 11170] Length = 366 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 26/106 (24%), Positives = 54/106 (50%), Gaps = 5/106 (4%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y+ +G + ++ L ++F VI+I +R S ++++L+++ Y +P L P Sbjct: 15 YLTALVGATLVVGALLMLFD--VIEITRRSG---SKAIGIDVVLEMALYHLPMSLQSALP 69 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSI 112 F F + + R++EL++I G S + PV+ + ++L I Sbjct: 70 FVFMGGAVMIFWKLARSSELVVIRAAGLSVWQFLAPVIAVVVVLGI 115 >gi|317153285|ref|YP_004121333.1| permease YjgP/YjgQ family protein [Desulfovibrio aespoeensis Aspo-2] gi|316943536|gb|ADU62587.1| permease YjgP/YjgQ family protein [Desulfovibrio aespoeensis Aspo-2] Length = 388 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 71/304 (23%), Positives = 132/304 (43%), Gaps = 31/304 (10%) Query: 18 MSCLF-IVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNV 76 ++CL ++ I ++Q+ R +S + NIL ++ YL P L ++TP + Sbjct: 20 VACLLGLILIGRMLQL--RSLFLSQNIGFFNIL-QLFFYLTPFFLLLITPIATMLSVFLT 76 Query: 77 LTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIF-LFISENIIEPKCRSTIKQLSAK 135 M+ + EL + G S ++ + +L ++F FIS + L Sbjct: 77 FLRMSTDNELTALKANGVSLYRMLPAPIAFCVLCTLFTFFISMWGLAWGMDMFKTSLYQF 136 Query: 136 AQLALTFSYLEENLFFRLDDDLYIKISKY-----NPNNTLQGIFIVDSRDTQTHKIYYAQ 190 A+ F+ L+ +F + + I+ Y N L+ +F+ D + + A Sbjct: 137 ARSHSRFA-LQPGVF----NKEFPGITFYAHQVDNDTGELKFVFVRDQSISGASVVVVAP 191 Query: 191 SGSI----DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA----NSSTIVLKA 242 I I+ N G ++R+S +DI+I++F SY+++ + + S KA Sbjct: 192 EARIVSSPKTAEVHIVFNKGRIYRQS--GEDINILRFGSYSVRLDLGKLLGDFSFSEEKA 249 Query: 243 NDQNLSFLLNPNPNNPNYRPE----LLETYRSEFHKRLTQWLFPVIFGLISI-VAADKRA 297 D + L N+P+ P+ L +E++KRLT L +I G+ +I +A R Sbjct: 250 KDMTFA-ALREIRNDPSIAPQQTAQFLRKVDTEYYKRLTLPLGCLILGMFAIPIAYVFRG 308 Query: 298 LVRQ 301 L +Q Sbjct: 309 LRQQ 312 >gi|265765250|ref|ZP_06093525.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|263254634|gb|EEZ26068.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] Length = 636 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 42/202 (20%), Positives = 92/202 (45%), Gaps = 9/202 (4%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 ++L +G F+ CLFI + ++ + + LV E +++L + Y +++PM P Sbjct: 15 FLLLFVGTFFI--CLFIFMMQFLWKYVDE--LVGKGLE-MSVLAQFFFYSALSLVPMSLP 69 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + + + ELL + G S + +++P++ L + F +N+I P+ + Sbjct: 70 LAVLLASLITFGNFGERFELLAMKAAGISLLKIMRPLIVLVFAICCVSFYFQNVIGPQAQ 129 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVD-SRDTQTH 184 + + L + + E +F+ D +K+ + + L + I D S + Sbjct: 130 AKLGTLLISMKQKSPEVDIPEGVFYDEIDGYNLKVQRKDRKTGMLYDVIIYDFSNNFDNA 189 Query: 185 KIYYAQSGSIDL--DRQAIILN 204 +I A SG +++ D+Q + L+ Sbjct: 190 RIIVADSGRLEMTADKQHLYLH 211 >gi|53711884|ref|YP_097876.1| hypothetical protein BF0593 [Bacteroides fragilis YCH46] gi|60680112|ref|YP_210256.1| putative permease [Bacteroides fragilis NCTC 9343] gi|52214749|dbj|BAD47342.1| conserved hypothetical protein [Bacteroides fragilis YCH46] gi|60491546|emb|CAH06298.1| putative permease [Bacteroides fragilis NCTC 9343] Length = 636 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 42/202 (20%), Positives = 92/202 (45%), Gaps = 9/202 (4%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 ++L +G F+ CLFI + ++ + + LV E +++L + Y +++PM P Sbjct: 15 FLLLFVGTFFI--CLFIFMMQFLWKYVDE--LVGKGLE-MSVLAQFFFYSALSLVPMSLP 69 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + + + ELL + G S + +++P++ L + F +N+I P+ + Sbjct: 70 LAVLLASLITFGNFGERFELLAMKAAGISLLKIMRPLIVLVFAICCVSFYFQNVIGPQAQ 129 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVD-SRDTQTH 184 + + L + + E +F+ D +K+ + + L + I D S + Sbjct: 130 AKLGTLLISMKQKSPEVDIPEGVFYDEIDGYNLKVQRKDRKTGMLYDVIIYDFSNNFDNA 189 Query: 185 KIYYAQSGSIDL--DRQAIILN 204 +I A SG +++ D+Q + L+ Sbjct: 190 RIIVADSGRLEMTADKQHLYLH 211 >gi|194333657|ref|YP_002015517.1| permease YjgP/YjgQ family protein [Prosthecochloris aestuarii DSM 271] gi|194311475|gb|ACF45870.1| permease YjgP/YjgQ family protein [Prosthecochloris aestuarii DSM 271] Length = 444 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 58/225 (25%), Positives = 97/225 (43%), Gaps = 27/225 (12%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRI--NLVSSSTESLNI----LLKISG 54 MK + YIL+ FL + L I+F+ + +Q V + L I LL+IS Sbjct: 1 MKIVDRYILKAHAAPFLFAFLTIIFV-FTLQFFSLFIARFVGKGLDLLVISELILLQIS- 58 Query: 55 YLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFL 114 +++ +PM M N+ NR +E+ ++ + G S +I PVL A +L+ + Sbjct: 59 WMVVLAVPMAVLVSTLMAFGNL---TNR-SEIAVMRSGGLSMSRVILPVLIAASVLAFLV 114 Query: 115 FISENIIEPKCRSTIKQL-----SAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-N 168 N++ P+ K L K LT EN F D I + +P+ Sbjct: 115 ERFNNVVLPEANYQAKMLLRDITKTKPSFGLT-----ENAFSSFIDGYSILVRDIDPDSG 169 Query: 169 TLQGIFIVDSRDTQTHKIYYAQSGSIDL--DRQAIILN--DGEVH 209 L+G+ I + + A++GSI D +I+ +GE+H Sbjct: 170 ELRGVTIYEGTRDDYSTVITAETGSISFTQDSHYLIMELYNGEIH 214 >gi|295689676|ref|YP_003593369.1| permease YjgP/YjgQ family protein [Caulobacter segnis ATCC 21756] gi|295431579|gb|ADG10751.1| permease YjgP/YjgQ family protein [Caulobacter segnis ATCC 21756] Length = 380 Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust. Identities = 30/162 (18%), Positives = 67/162 (41%) Query: 33 LQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNT 92 L +++ +S + LKI +P +L ++ P + L ++ E+++ Sbjct: 33 LSEFDVLVEQRQSAVVFLKIILLALPQLLAIMMPLALFVAALVALNRLHTEQEIVVCFAG 92 Query: 93 GTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFR 152 G SR +I P + LA++ ++ IS ++P I++ + + + + ++ F Sbjct: 93 GMSRWAVISPAMRLAVMAALISLISGLWLQPWSARQIRETAFDIKTDVASTLVQPGQFTE 152 Query: 153 LDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSI 194 L + N +N +Q +FI Y ++ I Sbjct: 153 PGPGLTVYAQSINRDNKIQNLFIHQEMPNGGASTYSSREAEI 194 >gi|171059277|ref|YP_001791626.1| permease YjgP/YjgQ family protein [Leptothrix cholodnii SP-6] gi|170776722|gb|ACB34861.1| permease YjgP/YjgQ family protein [Leptothrix cholodnii SP-6] Length = 364 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 60/245 (24%), Positives = 107/245 (43%), Gaps = 32/245 (13%) Query: 4 FELYILRCIGRSF---LMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 F+ + + + RSF L+ L IV +I+ L + L S + + +LL GY Sbjct: 3 FDSTLRKELSRSFGGTLIVILTIVLTMMLIRTLGQAALGRVSPQDVVLLL---GYTSLGH 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVL---------FLAILLS 111 LP + + + LT M ++E+ I +G S ++PV+ A+LL Sbjct: 60 LPTMLCLSLFVAVVSTLTRMYGDSEMTIWFASGVSLTRFVRPVVRFGTPIVFFVAALLLF 119 Query: 112 IFLFISENIIEPKCRSTIK-QLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NT 169 ++ + + NI E + R + LS A S + +FF I K +P+ T Sbjct: 120 VWPWSNRNISELRGRYEQRSDLSRVAPGQFQTSSNGQRVFF---------IDKQSPDAGT 170 Query: 170 LQGIFIVDSRDTQTHKIYYAQSGSIDL-----DRQAIILNDGEVHRKSPISKDISIMKFK 224 + IFI+D R + AQ+G IDL + ++L++G + +I +F Sbjct: 171 GRNIFILDQR-VDRESVTSAQTGRIDLPDADDTHRRLVLDNGARTDLDLKGETRTISRFD 229 Query: 225 SYTLQ 229 Y+++ Sbjct: 230 QYSIR 234 >gi|326568200|gb|EGE18282.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis BC8] Length = 442 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 49/252 (19%), Positives = 104/252 (41%), Gaps = 36/252 (14%) Query: 7 YILRC-IGRSFLMSCL---------FIVFIAWVIQILQRINLVSSSTESLNILLKISGYL 56 +ILRC I R ++ + + F+V I ++++ + + ++ +L ++ GY Sbjct: 56 HILRCHILRRYMTTQVASTTALVLGFLVVILLGGRLIRYFGMAAEGGLNVGVLFRLIGYN 115 Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 P L ++ P F + V + + E+ +++ +G SR + + ++ L ++L Sbjct: 116 FPYFLELILPLSFFIGLMLVFGRLYTDHEMTVMNASGISRGRVARLLMPLVVVLMCIEGW 175 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFI 175 + +P + + +A F + F D ++ + + N L+ + I Sbjct: 176 VSMVAKPWGMERATNIWQEQSVAQVFDLIRPQEFIS-SGDYHLYVGEMGANREFLKDVII 234 Query: 176 V--------DSRDTQTHK---IYYAQS--------GSIDLDRQAIILNDGEVHRKSPISK 216 + D + Q+HK I +A+S G I LD L G + P S+ Sbjct: 235 IQMHTAEPSDIQSRQSHKRDSIIFAKSATHVETGNGQIQLD-----LQQGRRYEVDPTSR 289 Query: 217 DISIMKFKSYTL 228 S + F+ Y + Sbjct: 290 QYSQIGFERYRM 301 >gi|299133713|ref|ZP_07026907.1| permease YjgP/YjgQ family protein [Afipia sp. 1NLS2] gi|298591549|gb|EFI51750.1| permease YjgP/YjgQ family protein [Afipia sp. 1NLS2] Length = 360 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 30/120 (25%), Positives = 60/120 (50%), Gaps = 3/120 (2%) Query: 16 FLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTN 75 FL L +V + + I++++R + S T S ++ + S + +P +L + PFC + + Sbjct: 22 FLGIFLLLVLVDY-IEMVRRTS--SIPTASAIMVAETSLFRVPQLLEKLMPFCILIGAMS 78 Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAK 135 +++R+ EL++ G S I P L A+L+ + + N I + K++ AK Sbjct: 79 CYLALSRSLELVVARAAGISAWQFITPALVAALLMGVLATVVYNPISAAMQERSKEMEAK 138 >gi|157374155|ref|YP_001472755.1| permease YjgP/YjgQ family protein [Shewanella sediminis HAW-EB3] gi|157316529|gb|ABV35627.1| permease YjgP/YjgQ family protein [Shewanella sediminis HAW-EB3] Length = 352 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 53/262 (20%), Positives = 107/262 (40%), Gaps = 17/262 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +LYI R I S + L + ++ +I+ + ++ LV + ++ +LIP Sbjct: 1 MRILDLYIARTIVSSSALCLLILTGLSGIIKWVDQLRLVGRGSYTMLDAGIYVLFLIPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M P + + + N+EL+++ ++G SR + + AI L + + Sbjct: 61 LEMFFPLGVLLGALIGMGMLASNSELVVMQSSGLSRWQITLSAMKTAIPLMLLIMALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P +L A + ++ + D DL++ I + N L I + + + Sbjct: 121 GAPVAEQKANELQATKLSGGSLIKSSRGIWAK-DGDLFVNIGEVEDINHLGNITLYEFDE 179 Query: 181 T--------QTHKIYYAQSGSI------DLDRQAIILNDGEVHR-KSPISKD-ISIMKFK 224 T H +Y + DL + L D ++R +S ++ D +S++ K Sbjct: 180 TLSLVRTIHAEHGVYSNDHWRLMDVRQTDLTEDKVTLTDLTLYRWESTLTPDKLSVVSVK 239 Query: 225 SYTLQTESANSSTIVLKANDQN 246 +L + LK N+Q+ Sbjct: 240 PESLSIQGLMGYLDYLKVNNQD 261 >gi|282892298|ref|ZP_06300694.1| hypothetical protein pah_c221o032 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281497889|gb|EFB40240.1| hypothetical protein pah_c221o032 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 361 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 17/75 (22%), Positives = 41/75 (54%) Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ PF + T L S++ N EL+ + +G S +L++P + + + ++ ++ + Sbjct: 67 LDVILPFALMLATIKTLCSLSTNNELVALMASGMSLKSLLRPFIIIGLFFTVLMYGNAEF 126 Query: 121 IEPKCRSTIKQLSAK 135 + PK + +KQ+ + Sbjct: 127 LLPKAQKGLKQIHDR 141 >gi|209885475|ref|YP_002289332.1| permease YjgP/YjgQ [Oligotropha carboxidovorans OM5] gi|209873671|gb|ACI93467.1| permease YjgP/YjgQ [Oligotropha carboxidovorans OM5] Length = 364 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 43/212 (20%), Positives = 92/212 (43%), Gaps = 32/212 (15%) Query: 8 ILRCIGRSFLM-SCLFIVFIAWVIQILQRINLV----SSSTESLNILLKISGYLIPTVLP 62 + R R F++ SC + I ++ ++ I +V S T S ++ + S + +P +L Sbjct: 10 LARYFARRFIVASCAVFLGIFLLLVLVDYIEMVRRTSSIPTASAFMVAQTSLFRVPQLLE 69 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + PFC + + +++R+ EL++ G S I P L A+++ I ++ N I Sbjct: 70 RLMPFCILIGAMSCYLALSRSLELVVARAAGISAWQFITPALVSALVMGILATVAYNPIS 129 Query: 123 PK---------------------CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKI 161 +S I Q++++ Q ++ + L +N RL + + Sbjct: 130 AAMQERSKEMEAQLFSNGGVQDVAQSWINQVTSEGQ-SIISAALSQNQGTRLSG---VTV 185 Query: 162 SKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGS 193 ++NP+ + + +D+RD + G+ Sbjct: 186 FRFNPDGSFRD--RIDARDANLEPGQWRLGGA 215 >gi|91774577|ref|YP_544333.1| permease YjgP/YjgQ [Methylobacillus flagellatus KT] gi|91708564|gb|ABE48492.1| permease YjgP/YjgQ [Methylobacillus flagellatus KT] Length = 361 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 43/203 (21%), Positives = 92/203 (45%), Gaps = 15/203 (7%) Query: 40 SSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITL 99 S +++++N LL G+ + LPM+ + L+ +R++E+++ + G + Sbjct: 42 SLASDAINTLL---GFSMLKFLPMMLSLTLFLAVLLTLSRWHRDSEMVVWFSAGQGLSSW 98 Query: 100 IKPVLFLAILLSIFLFISENIIEP----KCRSTIKQLSAKAQLA-LTFSYLEENLFFRLD 154 I+PVL + + + + + + P K QL ++ +LA ++ +E+ R Sbjct: 99 IRPVLTFGLPVIVVIALLSLFVTPWATGKGAEFRDQLKSRDELASISPGVFKES---RHA 155 Query: 155 DDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQA---IILNDGEVHRK 211 D ++ S N ++ IF V S Q I A G + +++ +G + Sbjct: 156 DRVFFVESFDELGNIVKNIF-VQSMQHQKLGIIVAARGHRETAENGDDFLVMQNGRRYEG 214 Query: 212 SPISKDISIMKFKSYTLQTESAN 234 +P + + SI +F+ Y ++ E A Sbjct: 215 TPNTAEYSITEFERYAIRIEPAE 237 >gi|163750107|ref|ZP_02157350.1| hypothetical protein KT99_20606 [Shewanella benthica KT99] gi|161330164|gb|EDQ01146.1| hypothetical protein KT99_20606 [Shewanella benthica KT99] Length = 352 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 54/266 (20%), Positives = 112/266 (42%), Gaps = 25/266 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISG----YL 56 MK +LYI R + S + L + ++ +I+ + ++ +V N + +G +L Sbjct: 1 MKILDLYIARTLVSSSALCLLILTGLSGIIKWVDQLRVVGRG----NYTMLDAGIYVLFL 56 Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 IP + + P + + + +EL+++ + G SR + + A+ L + + + Sbjct: 57 IPRDIEIFFPMAVLLGALIGMGMLASGSELVVMQSAGLSRFQITLSAMKTAVPLMLMIMV 116 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 P +L A + ++ + D DL++ I + N+L+ I + Sbjct: 117 LGEWGAPAAERRANELQAFKVSGGSLIKSSRGIWAK-DGDLFVNIGEVENINSLRNITLY 175 Query: 177 DSRDTQTH-KIYYAQSG-------------SIDLDRQAIILNDGEVHR-KSPISKD-ISI 220 + T T K +A+ G IDL + + L D ++R S ++ D +S+ Sbjct: 176 EFDSTLTLVKTIHAERGVYSNDHWRLLDVRQIDLTKDKVTLTDLTLYRWDSTLTPDKLSV 235 Query: 221 MKFKSYTLQTESANSSTIVLKANDQN 246 + K +L + L+AN+QN Sbjct: 236 VSVKPESLSIQGLLGYLDYLEANNQN 261 >gi|32491207|ref|NP_871461.1| hypothetical protein WGLp458 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166414|dbj|BAC24604.1| yjgP [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 357 Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust. Identities = 77/307 (25%), Positives = 136/307 (44%), Gaps = 37/307 (12%) Query: 7 YILRCIGRS-FLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYL----IPTVL 61 Y+++ I +S F + C I+F+ + Q L RI +SS +E L I KI +L IP ++ Sbjct: 6 YLIKKILKSQFHILC--ILFLIFFCQKLVRI--LSSMSEEL-IPKKIIFFLLILYIPEII 60 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 ++ P + V+ ++ + E++ I G IK +LFL +L+ F F++ I Sbjct: 61 KLILPLSLFISIALVMQKLHNSNEIISIKTCGIGNECFIKVILFLNLLVMSFSFVNVMWI 120 Query: 122 EP-----KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 P K + LS +L L E+ F D ++ + + N L+ IFIV Sbjct: 121 SPLALNYKHKIISYNLSNIDKLKLN----EKQFKFIKDKNIILFVDNIKDKN-LKNIFIV 175 Query: 177 D---SRDTQTHKIYYAQSGSI--DL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ 229 ++ ++ GS+ DL ++ I LN GE + S I F+ Y Q Sbjct: 176 KFILKNKEYIPVVFVSKHGSLYKDLLKNKNVINLNYGEYYEIDFKSNYFFIASFERY--Q 233 Query: 230 TESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 E N+ + + + + + + F N +E Y+ E++ R+T +I +IS Sbjct: 234 IELFNTFSRLKEPSSEYVYF--------KNLFNSCIEEYKLEYNWRITIVFSVLIMSIIS 285 Query: 290 IVAADKR 296 K+ Sbjct: 286 FALNIKK 292 >gi|145219916|ref|YP_001130625.1| permease YjgP/YjgQ family protein [Prosthecochloris vibrioformis DSM 265] gi|145206080|gb|ABP37123.1| permease YjgP/YjgQ family protein [Chlorobium phaeovibrioides DSM 265] Length = 441 Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust. Identities = 44/193 (22%), Positives = 76/193 (39%), Gaps = 20/193 (10%) Query: 53 SGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSI 112 S +++ PM M ++ +E+ + +G S L+ P+L ++LS Sbjct: 57 SAWMVGLAAPMAVLIAVVM----AFGALTTTSEMTVFRASGVSLYRLMIPILLAGLVLSF 112 Query: 113 FLFISENIIEP----KCRSTIKQL-SAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN 167 F+ N+++P + RS + + AK +T EN F L D I + K + Sbjct: 113 FVERFNNVVQPLANYQARSLMDDIVKAKPNFGIT-----ENAFSPLVDGYSILVRKSDER 167 Query: 168 NTLQG-IFIVDSRDTQTHKIYYAQSGSIDLDRQA----IILNDGEVHR-KSPISKDISIM 221 G I I DS + A+ G I + L +GE+H + P + M Sbjct: 168 TGGIGDIIIYDSTRPDFRSVITAEEGRISFSDDGGYLLLTLRNGEIHEVQQPDYRLYRKM 227 Query: 222 KFKSYTLQTESAN 234 F+ + ES Sbjct: 228 SFQQHRYVFESTG 240 >gi|85716330|ref|ZP_01047303.1| permease YjgP/YjgQ [Nitrobacter sp. Nb-311A] gi|85696846|gb|EAQ34731.1| permease YjgP/YjgQ [Nitrobacter sp. Nb-311A] Length = 365 Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust. Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 2/106 (1%) Query: 30 IQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLII 89 I++++R + ++S+ S ++ + S + +P +L +TPFC + +++R EL++ Sbjct: 37 IEMVRRTSGLASA--SALVVAETSLFRVPQLLEKLTPFCVLIGAMTCYLALSRQLELVVA 94 Query: 90 DNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAK 135 G S I P L AI+L N + R K++ A+ Sbjct: 95 RAAGVSAWQFISPALACAIVLGALATTVYNPLSANLRELSKRMEAE 140 >gi|227114629|ref|ZP_03828285.1| putative permease [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 371 Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust. Identities = 42/240 (17%), Positives = 98/240 (40%), Gaps = 23/240 (9%) Query: 47 NILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFL 106 N+++ + G +P ++ ++ P + + +E+ ++ G + L+K L L Sbjct: 46 NLVISLLGLGVPEMVQLILPLSLFLGVLMTFGRLYAESEITVMHACGLGKRVLLKAALVL 105 Query: 107 AILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP 166 A+ +I I+ + P +++ A+A+ + L E F + Sbjct: 106 AVFTAIVATINVMWLSPWSSRHQEEVLAEAKANPGMAALVEGQFQSAQGGNAVLFVGNVK 165 Query: 167 NNTLQGIFIVDSRDTQTHK--IYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIM 221 + + +F+ R + + + A G I + Q + L++G + + + +D I Sbjct: 166 GSEFEHVFLAQLRPSGNARPSVVVADRGHIKQNEDGAQVVTLDNGSRYEGTALLRDFRIT 225 Query: 222 KFKSYTL----QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLT 277 F +Y Q+ + N+S + +++ L + + ++ R+EFH RLT Sbjct: 226 DFTNYQAVIGHQSVTLNNSDV----QQMDMNTLWHSDAHDA----------RAEFHWRLT 271 >gi|29347827|ref|NP_811330.1| hypothetical protein BT_2417 [Bacteroides thetaiotaomicron VPI-5482] gi|29339729|gb|AAO77524.1| putative permease [Bacteroides thetaiotaomicron VPI-5482] Length = 616 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 43/198 (21%), Positives = 90/198 (45%), Gaps = 11/198 (5%) Query: 12 IGRSFLMSCLFIVFIAWVIQILQR-INLVSSSTESLNILLKISGYLIPTVLPMVTPFCFA 70 IG F+ CLFI +++Q L R ++ + ++++ + Y T++P+ P Sbjct: 4 IGTFFI--CLFI----FMMQFLWRYVDELVGKGLDMSVIAQFFFYSALTLVPISLPLAIL 57 Query: 71 METTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIK 130 + + + ELL + G S + +++P+ F L F +N++ P ++ + Sbjct: 58 LASLITFGNFGERYELLAMKAAGISLLKIMRPLAFFVCGLVAVSFYFQNVVGPIAQTKLY 117 Query: 131 QLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSRDT-QTHKIYY 188 L + + E +F+ D +KI+K N + + I + +D + I Y Sbjct: 118 TLIISMKQKSPELDIPEGVFYSEIPDYNLKIAKKNRKTGMMYDVLIYNLKDGFENAHIIY 177 Query: 189 AQSGSIDL--DRQAIILN 204 A SG +++ D+Q + L+ Sbjct: 178 ADSGRMEMTADKQHLWLH 195 >gi|298369121|ref|ZP_06980439.1| permease, YjgP/YjgQ family [Neisseria sp. oral taxon 014 str. F0314] gi|298283124|gb|EFI24611.1| permease, YjgP/YjgQ family [Neisseria sp. oral taxon 014 str. F0314] Length = 371 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 50/260 (19%), Positives = 117/260 (45%), Gaps = 12/260 (4%) Query: 15 SFLMSCLFIVFIAWVIQILQRINLVSSSTES---LNILLKISGYLIPTVLPMVTPFCFAM 71 SF +F+V +A V+ Q INL+ + + ++ + + G+ + + P++ + Sbjct: 12 SFTAVGIFVVLLA-VLVSTQAINLLGRAADGRVAVDAVAALVGFWVIGMTPLLLVLTAFI 70 Query: 72 ETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP----KCRS 127 T VLT R++E+ + + G + I+PV+ A+ ++ + + + + P + R Sbjct: 71 STLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFALLIAVMQLWVMPWAELRSRE 130 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 + L K +L+L + E N + D +Y + + ++ +F+ + I Sbjct: 131 YAEILKQKQELSLVEAG-EFNSLGKRSDRVYFVETFDTESGIMKNLFLRELDKNGNDNII 189 Query: 188 YAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQ 245 +A+ G+ L +++ + L +G + P D + + F+ ++ S + A+ + Sbjct: 190 FAKEGNFALTDNKRTLELRNGYRYSGKPGRADYNQVSFEHLSMII-STTPKIVDPIAHRR 248 Query: 246 NLSFLLNPNPNNPNYRPELL 265 + +NP Y+ EL+ Sbjct: 249 TIPTAKLFGSDNPQYQAELM 268 >gi|71277954|ref|YP_267493.1| putative permease [Colwellia psychrerythraea 34H] gi|71143694|gb|AAZ24167.1| putative permease [Colwellia psychrerythraea 34H] Length = 355 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 52/265 (19%), Positives = 112/265 (42%), Gaps = 19/265 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + YI R I + ++ V ++ +I+ ++++ + L Y +P Sbjct: 1 MRIIDFYIGRVIASTTFITLAVFVSVSGIIKFVEQMRAIGRGNYDLAHAALYVLYAVPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + + + N+EL+++ G SR+ +IK V+ A+LL I Sbjct: 61 VEVFFPMSALIGGLIGIGMLASNSELIVMQAAGLSRLDIIKSVMKTAVLLIIVSMAIGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI----- 175 + P + +++ A+A + + ++ + D D ++ I + L+ + I Sbjct: 121 LAPSGEAKAREIRAQAISGGSLIAAKNGVWAK-DGDYFVNIGEVLDRGQLKKVQIYGFND 179 Query: 176 ---VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK----DISIMKFKSYTL 228 +DS + IY +S + D + L + E+ KS K ++ K T+ Sbjct: 180 ELKIDSWLSAKSAIYQDKSWLLT-DVEEFSLTENEIITKSHSQKIWNSSLTPKKLGVVTV 238 Query: 229 QTESANSSTIV-----LKANDQNLS 248 ES + ++ L+AN+Q+ S Sbjct: 239 TPESLSLRGLIDYLDYLEANEQDPS 263 >gi|307154796|ref|YP_003890180.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 7822] gi|306985024|gb|ADN16905.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 7822] Length = 388 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 45/230 (19%), Positives = 100/230 (43%), Gaps = 28/230 (12%) Query: 39 VSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRIT 98 V+ S S++I L+I +P + + P + T + + ++EL+ + G S Sbjct: 55 VTESGLSISIALQILMLKMPEFVVLAFPMSILLATLMGYSRLASDSELIAFRSIGISPYR 114 Query: 99 LIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL- 157 L+ P L L+++++ F + + P+ K + A A L+++ +++D++ Sbjct: 115 LLVPSLILSLMVTGTTFFFSDYVAPQATQQAKSILADA--------LKQDKPLQVEDNII 166 Query: 158 ---YIKISKYNPNNT----------------LQGIFIVDSRDTQTHKIYYAQSGSIDLDR 198 Y KI++ N + +QG+ I+D ++I +QS ++D+ Sbjct: 167 YPEYKKITQDNGRDQTILTRLFYAEKFDGQQMQGLTILDRSQPGVNQIVTSQSAIWNVDQ 226 Query: 199 QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLS 248 + +G ++ +P +I++F+ L A K N ++S Sbjct: 227 NSWDFYNGTIYLIAPDGSYRNIVRFEHQQLDLPRAPLDIAKRKQNPADMS 276 >gi|110637606|ref|YP_677813.1| permease [Cytophaga hutchinsonii ATCC 33406] gi|110280287|gb|ABG58473.1| conserved hypothetical protein; possible permease [Cytophaga hutchinsonii ATCC 33406] Length = 359 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 74/343 (21%), Positives = 141/343 (41%), Gaps = 35/343 (10%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRI-NLVSSSTESLNILLKISGYLIPT 59 MK +LYI++ ++ L + + VI I +++ + + IL++ IP Sbjct: 1 MKKLDLYIIKKFLVTYFFVVLMFMLVITVIDITEKMEDFMKHKLSIWFILVEYYFAFIPY 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +++P + T V ++ TE++ + ++G S ++ P L +IL++ +F Sbjct: 61 MANLLSPITIFIATIFVTANLAARTEIIAMLSSGMSLTRIMYPYLIGSILIAFMVFYMSG 120 Query: 120 IIEPKCRSTIKQLS-AKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF---- 174 + P K++ K + TF Y N+ + Y+ I YN + F Sbjct: 121 WLIPHGNK--KRVDFEKKYIKSTFFYEGRNVHMKTAPTTYVYIESYNSEINVGYQFTLET 178 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 I+D+R K A + + + + + + R + K+ FK L T Sbjct: 179 IIDNRLVSKLK---AARMNWNDSTKKWRMEEYFIRRFTEDGKE---EVFKGRGLDT---- 228 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLE--------TYRSEFHKRLTQWLFPVIFG 286 + TI K + + N + LLE TY +E ++R T +I Sbjct: 229 ALTITPKDFEDTYMLFETYDMGELNNQIALLEARGSENISTYITEKYQRYTYPFSVIILT 288 Query: 287 LISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI 329 LI ++A+ +++ R+ L+I+FG F YII I Sbjct: 289 LIGVIASSRKS--REGA-------GLTIAFGFLLAFVYIIFMI 322 >gi|158337167|ref|YP_001518342.1| YjgP/YjgQ family membrane protein [Acaryochloris marina MBIC11017] gi|158307408|gb|ABW29025.1| membrane protein, YjgP/YjgQ family, putative [Acaryochloris marina MBIC11017] Length = 383 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 35/181 (19%), Positives = 75/181 (41%), Gaps = 13/181 (7%) Query: 41 SSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLI 100 SS ++L +L+ +P + + P + + + R EL+ + GTS +I Sbjct: 62 SSVDALQVLV----LQLPRFMVLALPMSMLLAPLLTYSQLARKNELIALKACGTSVYRVI 117 Query: 101 KPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFF------RLD 154 +P L ++++++ I P + + +L A+ ++ + +N+ RL Sbjct: 118 RPALCFSLIVAVSTLTLNEWIVPPATAAVHRLQAQQTVSQITAIPRQNIVHQTYHHQRLT 177 Query: 155 DDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI 214 + ++ L + I+ +D H I+ A+ D Q IL+ G + P+ Sbjct: 178 QLFH---ARAFDGEALHQLTILQFQDRHLHHIWLAKQAIWDSTHQQWILSQGTRYTIDPV 234 Query: 215 S 215 S Sbjct: 235 S 235 >gi|326559485|gb|EGE09908.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis 7169] gi|326566095|gb|EGE16252.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis BC1] gi|326567798|gb|EGE17902.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis 12P80B1] gi|326572163|gb|EGE22159.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis BC7] Length = 437 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 43/227 (18%), Positives = 93/227 (40%), Gaps = 26/227 (11%) Query: 22 FIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMN 81 F+V I ++++ + + ++ +L ++ GY P L ++ P F + V + Sbjct: 76 FLVVILLGGRLIRYFGMAAEGGLNVGVLFRLIGYNFPYFLELILPLSFFIGLMLVFGRLY 135 Query: 82 RNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALT 141 + E+ +++ +G SR + + ++ L ++L + +P + + +A Sbjct: 136 TDHEMTVMNASGISRGRVARLLMPLVVVLMCIEGWVSMVAKPWGMERATNIWQEQSVAQV 195 Query: 142 FSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIV--------DSRDTQTHK---IYYA 189 F + F D ++ + + N L+ + I+ D + Q+HK I +A Sbjct: 196 FDLIRPQEFIS-SGDYHLYVGEMGANREFLKDVIIIQMHTAEPSDIQSRQSHKRDSIIFA 254 Query: 190 QS--------GSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 +S G I LD L G + P S+ S + F+ Y + Sbjct: 255 KSATHVETGNGQIQLD-----LQQGRRYEVDPTSRQYSQIGFERYRM 296 >gi|330997503|ref|ZP_08321352.1| permease, YjgP/YjgQ family [Paraprevotella xylaniphila YIT 11841] gi|329570534|gb|EGG52258.1| permease, YjgP/YjgQ family [Paraprevotella xylaniphila YIT 11841] Length = 633 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 44/188 (23%), Positives = 81/188 (43%), Gaps = 26/188 (13%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQR-INLVSSSTESLNILLKISGYLIPTVLP 62 F+ Y L +G F+ CLFI +++Q + R ++ + +L++L Y T++P Sbjct: 12 FKAYSLLFVGTFFI--CLFI----FLMQFMWRYVDELIGKGLTLDVLAHFFYYASLTLIP 65 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M P + + ++ ELL + G + +++P++ ILL I F +NI Sbjct: 66 MSLPLAILLASLITFGNLGERFELLSMKAAGIPLVRILQPIIIFNILLCIGSFYFQNITG 125 Query: 123 PKCRS-------TIKQLSAKAQLALTFSYLE---ENLFFRLDDDLYIKISKYNPNNTLQG 172 P+ + ++KQ S + ++ Y E N+F K N L G Sbjct: 126 PEAQKKFYTLIYSMKQKSPELEIPEGIFYSEIPGYNIFVE---------KKGKENGMLYG 176 Query: 173 IFIVDSRD 180 + I + D Sbjct: 177 VMIYSTTD 184 >gi|124267132|ref|YP_001021136.1| putative transmembrane protein [Methylibium petroleiphilum PM1] gi|124259907|gb|ABM94901.1| putative transmembrane protein [Methylibium petroleiphilum PM1] Length = 363 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 52/241 (21%), Positives = 106/241 (43%), Gaps = 13/241 (5%) Query: 4 FELYILRCIGRSF---LMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 F+ + R + RSF L+ + IV ++I+ L + S + + + +LL GY+ Sbjct: 3 FDSTLRRDLARSFGATLVVIMTIVITMFLIRTLGQAAGGSVAAQDVALLL---GYVALEN 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP + + LT M R++E++I +G + + PVL L L + + + Sbjct: 60 LPTILSLSLFIAVVTTLTRMYRDSEMVIWFASGVGLLRFVPPVLRLTAPLLLLVALLALF 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD---LYIKISKYNPNNTLQGIFIVD 177 + P I +L + Q + + F D +I+ N + +F+++ Sbjct: 120 VWPWGNRQIAELKDRYQRRSDVARVAPGQFQSSADGKRTFFIE-RDTGEGNIARNVFVLE 178 Query: 178 SRDTQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 R + + A++G I D D++ ++L G+ + + + + + +F SY + A S Sbjct: 179 -RKPDSESVTSARTGRIEMDGDQRFVVLESGQRNDINLATGERKLAQFDSYRVLAGEAVS 237 Query: 236 S 236 S Sbjct: 238 S 238 >gi|283957186|ref|ZP_06374650.1| hypothetical protein C1336_000800059 [Campylobacter jejuni subsp. jejuni 1336] gi|283791362|gb|EFC30167.1| hypothetical protein C1336_000800059 [Campylobacter jejuni subsp. jejuni 1336] Length = 341 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 71/301 (23%), Positives = 120/301 (39%), Gaps = 41/301 (13%) Query: 9 LRCIGRSFL---MSCLFIVF-IAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 LR + FL +S F++F I ++ +Q L SS S LLK+ G+++P +L Sbjct: 5 LRYVLNQFLSTNLSIFFVLFAIVSMVFFIQLAKLTSSIEISFLDLLKLYGFMLPRILIFT 64 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P F + T L +++ E +++ G S + L K L +A L+S F+ + ++ P Sbjct: 65 LPISFFISLTLALFRLSKENESIVLFTLGFSPMILAKFFLKIASLISAFMLVVALVMIPI 124 Query: 125 CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTH 184 + F+Y K ++ L + ++ +D+ + Sbjct: 125 VFELQDNFVNYKSTQVKFNY---------------KTGEFG-QKFLDWMIFIEKQDSDKY 168 Query: 185 K--IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE----SANSSTI 238 + I Y D Q II + V RK S S+ + K Y + S T+ Sbjct: 169 ENIIMYRPKHKTDDKEQLIIAKEAHVQRKDD-SFAFSLNQGKMYNFEQGQSIFSGEFDTL 227 Query: 239 VLKA-----NDQNLSFL-----LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 V+ N Q F LN NP R ++ T + F L LF + FGL+ Sbjct: 228 VVNTQFNTDNLQTKKFYEYWNDLNENPQRA--REFVIYTTIALFP--LASTLFALCFGLV 283 Query: 289 S 289 + Sbjct: 284 T 284 >gi|227327171|ref|ZP_03831195.1| putative permease [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 371 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 42/240 (17%), Positives = 97/240 (40%), Gaps = 23/240 (9%) Query: 47 NILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFL 106 N+++ + G +P ++ ++ P + + +E+ ++ G + L+K L L Sbjct: 46 NLVISLLGLGVPEMVQLILPLSLFLGVLMTFGRLYAESEITVMHACGLGKRVLLKAALVL 105 Query: 107 AILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP 166 A+ +I I+ + P +++ A+A+ + L E F + Sbjct: 106 AVFTAIVATINVMWLSPWSSRHQEEVLAEAKANPGMATLVEGQFQSAQGGNAVLFVGNVK 165 Query: 167 NNTLQGIFIVDSRDTQTHK--IYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIM 221 + + +F+ R + + + A G I + Q + L++G + + + +D I Sbjct: 166 GSEFEHVFLAQLRPSGNARPSVVVADRGHIKQNEDGAQVVTLDNGSRYEGTALLRDFRIT 225 Query: 222 KFKSYTL----QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLT 277 F +Y Q+ + N+S + ++ L + + ++ R+EFH RLT Sbjct: 226 DFTNYQAVIGHQSVTLNNSDV----QQMDMQTLWHSDAHDA----------RAEFHWRLT 271 >gi|153951328|ref|YP_001398257.1| hypothetical protein JJD26997_1188 [Campylobacter jejuni subsp. doylei 269.97] gi|152938774|gb|ABS43515.1| putative membrane protein [Campylobacter jejuni subsp. doylei 269.97] Length = 341 Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust. Identities = 48/209 (22%), Positives = 85/209 (40%), Gaps = 22/209 (10%) Query: 9 LRCIGRSFL---MSCLFIVF-IAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 LR + FL +S F++F I ++ +Q L SS S LLK+ G+++P +L Sbjct: 5 LRYVLNQFLSTNLSIFFVLFAIVSMVFFIQLAKLTSSIEISFLDLLKLYGFMLPRILIFT 64 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P F + T L +++ E +++ G S + L K L +A L+S F+ + ++ P Sbjct: 65 LPISFFISLTLALFRLSKENESIVLFTLGFSPMILAKFFLKIASLISAFMLVVALVMTPI 124 Query: 125 CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTH 184 + F+Y K ++ L + ++ +D+ H Sbjct: 125 VFELQDNFVNYKSTQVKFNY---------------KTGEFG-QKFLDWMIFIEKQDSDKH 168 Query: 185 K--IYYAQSGSIDLDRQAIILNDGEVHRK 211 + I Y Q II + V RK Sbjct: 169 ENIIMYRPKHKAGDKEQLIIAKEAHVQRK 197 >gi|332880892|ref|ZP_08448562.1| permease, YjgP/YjgQ family [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332681066|gb|EGJ53993.1| permease, YjgP/YjgQ family [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 633 Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust. Identities = 44/188 (23%), Positives = 81/188 (43%), Gaps = 26/188 (13%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQR-INLVSSSTESLNILLKISGYLIPTVLP 62 F+ Y L +G F+ CLFI +++Q + R ++ + +L++L Y T++P Sbjct: 12 FKAYSLLFVGTFFI--CLFI----FMMQFMWRYVDELIGKGLTLDVLAHFFYYAGLTLIP 65 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M P + + ++ ELL + G I +++P++ ILL I F +N+ Sbjct: 66 MSLPLAILLASLITFGNLGERFELLSMKAAGIPLIRILQPIIIFNILLCIGSFYFQNVTG 125 Query: 123 PKCRS-------TIKQLSAKAQLALTFSYLE---ENLFFRLDDDLYIKISKYNPNNTLQG 172 P+ + ++KQ S + ++ Y E N+F K N L G Sbjct: 126 PEAQKKFYTLIYSMKQKSPELEIPEGIFYSEIPGYNIFVE---------KKGKENGMLYG 176 Query: 173 IFIVDSRD 180 + I + D Sbjct: 177 VMIYSTTD 184 >gi|325295269|ref|YP_004281783.1| permease YjgP/YjgQ family protein [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065717|gb|ADY73724.1| permease YjgP/YjgQ family protein [Desulfurobacterium thermolithotrophum DSM 11699] Length = 354 Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust. Identities = 38/169 (22%), Positives = 76/169 (44%), Gaps = 2/169 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K + Y+ R F+++ L + + VI + +++ S + L I Y +P Sbjct: 2 VKRLDRYVFIETLRYFVLTLLTFMVLFIVIDFVSKMDTFLKSGIADGFLYVI--YRLPLY 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 V P + T L++ + + EL ++ G S P++FLA L SI F+ + Sbjct: 60 TVRVIPIATLIATMVTLSNFSFSNELTVVKALGISVYRFSFPIIFLAFLASILSFLIGEL 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT 169 + PK S K + K + F ++++F+ D+ ++ + NP + Sbjct: 120 VVPKSISLSKSIYYKVKENKNFHVSGKSIWFKKDEKTFVFMEYVNPAKS 168 >gi|57237667|ref|YP_178915.1| hypothetical protein CJE0913 [Campylobacter jejuni RM1221] gi|86152068|ref|ZP_01070280.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 260.94] gi|86153259|ref|ZP_01071463.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni HB93-13] gi|121613133|ref|YP_001000511.1| hypothetical protein CJJ81176_0843 [Campylobacter jejuni subsp. jejuni 81-176] gi|157415093|ref|YP_001482349.1| hypothetical protein C8J_0773 [Campylobacter jejuni subsp. jejuni 81116] gi|167005447|ref|ZP_02271205.1| hypothetical protein Cjejjejuni_04350 [Campylobacter jejuni subsp. jejuni 81-176] gi|315124344|ref|YP_004066348.1| hypothetical protein ICDCCJ07001_795 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|57166471|gb|AAW35250.1| membrane protein, putative [Campylobacter jejuni RM1221] gi|85840853|gb|EAQ58103.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 260.94] gi|85842985|gb|EAQ60196.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni HB93-13] gi|87249473|gb|EAQ72433.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 81-176] gi|157386057|gb|ABV52372.1| hypothetical protein C8J_0773 [Campylobacter jejuni subsp. jejuni 81116] gi|307747735|gb|ADN91005.1| Putative membrane protein [Campylobacter jejuni subsp. jejuni M1] gi|315018066|gb|ADT66159.1| hypothetical protein ICDCCJ07001_795 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315058276|gb|ADT72605.1| Predicted permease YjgP/YjgQ family [Campylobacter jejuni subsp. jejuni S3] gi|315928910|gb|EFV08167.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 305] gi|315931165|gb|EFV10138.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 327] Length = 341 Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust. Identities = 71/301 (23%), Positives = 120/301 (39%), Gaps = 41/301 (13%) Query: 9 LRCIGRSFL---MSCLFIVF-IAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 LR + FL +S F++F I ++ +Q L SS S LLK+ G+++P +L Sbjct: 5 LRYVLNQFLSTNLSIFFVLFAIVSMVFFIQLAKLTSSIEISFLDLLKLYGFMLPRILIFT 64 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P F + T L +++ E +++ G S + L K L +A L+S F+ + ++ P Sbjct: 65 LPISFFISLTLALFRLSKENESIVLFTLGFSPMILAKFFLKIASLISAFMLVVALVMIPI 124 Query: 125 CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTH 184 + F+Y K ++ L + ++ +D+ + Sbjct: 125 VFELQDNFVNYKSTQVKFNY---------------KTGEFG-QKFLDWMIFIEKQDSDKY 168 Query: 185 K--IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE----SANSSTI 238 + I Y D Q II + V RK S S+ + K Y + S T+ Sbjct: 169 ENIIMYRPKHKADDKEQLIIAKEAHVQRKDD-SFAFSLNQGKMYNFEQGQSIFSGEFDTL 227 Query: 239 VLKA-----NDQNLSFL-----LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 V+ N Q F LN NP R ++ T + F L LF + FGL+ Sbjct: 228 VVNTQFNTDNLQTKKFYEYWNDLNENPQRA--REFVIYTTIALFP--LASTLFALCFGLV 283 Query: 289 S 289 + Sbjct: 284 T 284 >gi|291287414|ref|YP_003504230.1| permease YjgP/YjgQ family protein [Denitrovibrio acetiphilus DSM 12809] gi|290884574|gb|ADD68274.1| permease YjgP/YjgQ family protein [Denitrovibrio acetiphilus DSM 12809] Length = 361 Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust. Identities = 45/201 (22%), Positives = 81/201 (40%), Gaps = 17/201 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F YI++ + ++ +F+ I + Q ++S S L+ P + Sbjct: 1 MTKFNKYIIKLFVQYTVIVQVFVAIITLIANTFQHTKMLSEYNISFMTLIVYDLMKTPYL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + T V+ ++ +N EL+ + G L P + I LS+ L+ S ++ Sbjct: 61 LYTTMPMTIVISTMLVMVTLLKNNELIAYVSLGGKIRNLAYPFIVSGIFLSVLLYFSADV 120 Query: 121 IEPK--------CRSTIKQLSAKAQLALTFSYLEE--------NLFFRLDDDLYIKISKY 164 I PK IK + LT +L+E NL + + I I++Y Sbjct: 121 INPKIMLERERFAYENIKNRTFNVSGKLTDMWLKESDSSFININLMDPTEKKI-IGITEY 179 Query: 165 NPNNTLQGIFIVDSRDTQTHK 185 + NN Q +IV + ++ Sbjct: 180 HLNNNFQVDYIVTYDSAEYYE 200 >gi|85859086|ref|YP_461288.1| permease [Syntrophus aciditrophicus SB] gi|85722177|gb|ABC77120.1| permease [Syntrophus aciditrophicus SB] Length = 394 Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust. Identities = 50/257 (19%), Positives = 111/257 (43%), Gaps = 21/257 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+++ I + F + + F+ + +ILQ ++L+ + L+ + ++ +L+P+ Sbjct: 1 MKIINRYLVKEILQPFGIVLFVLTFVLLMGKILQLMDLMINKGVGLSHIARLILFLLPSF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + L ++ + EL ++ +G S L P+L +A++ + + Sbjct: 61 LVFTLPISLLVSVLIALGRLSSDNELTVLKASGISLYRLTPPILMIALVSFMLTAATTLF 120 Query: 121 IEPKCRSTIKQL-----SAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT--LQGI 173 + P + K L KA + + + F D + + ++ P++ ++G+ Sbjct: 121 LVPYSNTATKALIFNVARNKASIGI------KEKVFNADFNGVVLYAEKVPSDGRFMEGV 174 Query: 174 FIVDSRDTQTHKIYYAQSGSIDLDRQAII----LNDGEVHRKSPISKDISIMKFKSY--- 226 + D R A+ + D +++ L DG + + K M FK+Y Sbjct: 175 LVSDQRTADEPGTIIAKKAFLVADPKSMTVTLRLEDGSTYFVAENMKIFRKMDFKTYDIN 234 Query: 227 -TLQTESANSSTIVLKA 242 LQ+ S+++ + KA Sbjct: 235 LDLQSSSSDAEKMRTKA 251 >gi|313200017|ref|YP_004038675.1| permease [Methylovorus sp. MP688] gi|312439333|gb|ADQ83439.1| permease YjgP/YjgQ family protein [Methylovorus sp. MP688] Length = 355 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 44/200 (22%), Positives = 89/200 (44%), Gaps = 15/200 (7%) Query: 40 SSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITL 99 S +++++N LL G+ + LPM+ + LT +R++E+++ ++G Sbjct: 31 SLASDAINTLL---GFSMLKFLPMILSLTIFLAVLLTLTRWHRDSEMVVWFSSGMGLAGW 87 Query: 100 IKPVLFLAILLSIFLFISENIIEP----KCRSTIKQLSAKAQLA-LTFSYLEENLFFRLD 154 I+PVL AI + + + + P K QL ++ +LA ++ +E+ R Sbjct: 88 IRPVLTFAIPVVAVIAVLSLFVTPWATNKGSEFRDQLKSRDELASISPGVFKES---RNA 144 Query: 155 DDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGS---IDLDRQAIILNDGEVHRK 211 D ++ S N ++ IF V S Q + A G D +++ G + Sbjct: 145 DRVFFVESFDELGNVVKNIF-VQSVQHQRLGVVVASQGHRTVADNGDNFLVMEHGRRYEG 203 Query: 212 SPISKDISIMKFKSYTLQTE 231 P + + S +F+ Y+++ E Sbjct: 204 KPNTAEFSTTEFERYSIRIE 223 >gi|253997951|ref|YP_003050014.1| permease [Methylovorus sp. SIP3-4] gi|253984630|gb|ACT49487.1| permease YjgP/YjgQ family protein [Methylovorus sp. SIP3-4] Length = 366 Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust. Identities = 44/200 (22%), Positives = 89/200 (44%), Gaps = 15/200 (7%) Query: 40 SSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITL 99 S +++++N LL G+ + LPM+ + LT +R++E+++ ++G Sbjct: 42 SLASDAINTLL---GFSMLKFLPMILSLTIFLAVLLTLTRWHRDSEMVVWFSSGMGLAGW 98 Query: 100 IKPVLFLAILLSIFLFISENIIEP----KCRSTIKQLSAKAQLA-LTFSYLEENLFFRLD 154 I+PVL AI + + + + P K QL ++ +LA ++ +E+ R Sbjct: 99 IRPVLTFAIPVVAVIAVLSLFVTPWATNKGSEFRDQLKSRDELASISPGVFKES---RNA 155 Query: 155 DDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGS---IDLDRQAIILNDGEVHRK 211 D ++ S N ++ IF V S Q + A G D +++ G + Sbjct: 156 DRVFFVESFDELGNVVKNIF-VQSVQHQRLGVVVASQGHRTVADNGDNFLVMEHGRRYEG 214 Query: 212 SPISKDISIMKFKSYTLQTE 231 P + + S +F+ Y+++ E Sbjct: 215 KPNTAEFSTTEFERYSIRIE 234 >gi|319954060|ref|YP_004165327.1| permease yjgp/yjgq family protein [Cellulophaga algicola DSM 14237] gi|319422720|gb|ADV49829.1| permease YjgP/YjgQ family protein [Cellulophaga algicola DSM 14237] Length = 359 Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust. Identities = 33/166 (19%), Positives = 75/166 (45%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YIL+ +F + L + I ++ + ++ N + + LN +L G + Sbjct: 1 MTILDKYILKRYLVTFSVMLLLFIPIGIMVHLSEQYNKMQDNEAPLNEILMYLGNFSIYI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 M+ P + + + NTE++ + ++G S ++P L A++++ F+ + Sbjct: 61 GSMLLPIFLFLSVIFFTSKLAGNTEIVAMLSSGISYGRFLRPYLMGAVIVAAFMLLMGMF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP 166 I P + K + EN+F +L+ + +I +S+++P Sbjct: 121 IVPNASKGFNEFKFKYLKKGKQDRVTENIFNQLNANDFIYVSRFDP 166 >gi|313205632|ref|YP_004044809.1| permease yjgp/yjgq family protein [Riemerella anatipestifer DSM 15868] gi|312444948|gb|ADQ81303.1| permease YjgP/YjgQ family protein [Riemerella anatipestifer DSM 15868] gi|315022637|gb|EFT35662.1| hypothetical protein RAYM_03529 [Riemerella anatipestifer RA-YM] gi|325334940|gb|ADZ11214.1| permease YjgP/YjgQ family protein [Riemerella anatipestifer RA-GD] Length = 484 Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 4/134 (2%) Query: 1 MKSFELYILRCIGRSFLM--SCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIP 58 +K + YI++ FL S LF +F+ +I I ++ + S + K+ Y+ Sbjct: 2 LKKLDRYIIKTFFGPFLFIFSVLFFIFLVNIIWI--KLYQFTGKGLSPFEIGKLLFYMGV 59 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 +V+ MV P + + + EL + G S +++P++F+ LLSI LFI Sbjct: 60 SVVNMVLPLTVLLSSIMTFGAFGERYELAAMKAAGISLFRIMRPLIFVVTLLSIILFIFS 119 Query: 119 NIIEPKCRSTIKQL 132 N + P K + Sbjct: 120 NNVIPDFNRKAKNM 133 >gi|189425644|ref|YP_001952821.1| permease YjgP/YjgQ family protein [Geobacter lovleyi SZ] gi|189421903|gb|ACD96301.1| permease YjgP/YjgQ family protein [Geobacter lovleyi SZ] Length = 359 Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust. Identities = 79/360 (21%), Positives = 154/360 (42%), Gaps = 62/360 (17%) Query: 29 VIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLI 88 ++ ++++ S + SL+ +L+ + IP +L PF M T L ++R++EL Sbjct: 30 ILDFMEKLGRFSKAGASLSAILQFFLFKIPEMLGQTMPFAVLMATLLALGMLSRSSELTA 89 Query: 89 IDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRST---IKQLSAKAQLALTFSYL 145 + + G S ++ P+L L +L S+ L ++ + PK I+++ K Q TF L Sbjct: 90 LRSCGLSIPRIVLPILMLGLLGSLVLLVNSEFVVPKSYQQMEHIEKVVIKKQSVNTFFRL 149 Query: 146 EENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILN 204 N++FR ++L ++ + P TL+G+ + + + D Q + Sbjct: 150 -NNIWFR-SNNLILQAKVFEPLTRTLKGVTVWE----------------LSADMQPVRRM 191 Query: 205 DGEVHRKSPISKDISIMKFKSYTLQTESANSST----IVLKANDQNLSFLLNPNPNNPNY 260 D E ++ ++ +S+ Q S+ + LK +D +L+ N +N ++ Sbjct: 192 DAEQALYGSGGWELLQVRTRSFAGQGGVVASARLSVPLTLKVDDLR---ILDNNADNFSF 248 Query: 261 RPELLE-------------TYRSEFHKRLTQWLFPVIFG-LISIVAADKRALVRQRKKIH 306 R +L E YR+ H +L + FG + +V AL R Sbjct: 249 R-KLREYAVSLEKGGYPAGRYRTMMHAKLA-----LPFGAFVMVVLGIPFALKTGRTS-- 300 Query: 307 PIFISLSISFGVFWGFSY-IIHKIEQN--------PYYIPILYLFLFCISSIFLLMIKKK 357 +++ + GV GF+Y II+ Q+ P+ +F ++ I+L M K+ Sbjct: 301 --GVAMGVGAGVAIGFAYFIINAAVQSYGRSGVLPPFVAAWGANLIFVLTGIWLSMTVKQ 358 >gi|86133416|ref|ZP_01051998.1| predicted permease YjgP/YjgQ family [Polaribacter sp. MED152] gi|85820279|gb|EAQ41426.1| predicted permease YjgP/YjgQ family [Polaribacter sp. MED152] Length = 483 Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust. Identities = 54/227 (23%), Positives = 95/227 (41%), Gaps = 20/227 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL+ F+ + L ++F+ + + Q ++ S+ +LK Y + Sbjct: 1 MKILDKYILKSFLVPFIATFLIVLFVLVMQALWQAFENIAGKGISVIFILKFLYYTTLMI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P P + + L ++ N E + G S L++P+ LAI LS F+ N Sbjct: 61 IPQALPIGVLLSSIMALGNLGENYEFAAAKSAGVSLQRLVRPIGILAIALSGLNFLFLNN 120 Query: 121 IEPKCRSTIKQL-----SAKAQLALTFSYLEENL-FFRLDDDLYIKISKYN-PNNTLQGI 173 + P + L K LAL ++ +++ D KY N L+ + Sbjct: 121 VFPYANLKQRNLYLNIKKKKPALALVPGSFNADIPGYQIKFD-----EKYGEEENLLKKV 175 Query: 174 FIVD-SRDTQTHKIYYAQSGSIDLDRQA----IILNDG---EVHRKS 212 +I D + + K+ A+SG I + + IL +G E H KS Sbjct: 176 WIYDLTSNRGNQKVITAESGKIVTEEGSRYMTFILYNGNYYEEHVKS 222 >gi|257095656|ref|YP_003169297.1| permease YjgP/YjgQ family protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257048180|gb|ACV37368.1| permease YjgP/YjgQ family protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 359 Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust. Identities = 52/281 (18%), Positives = 113/281 (40%), Gaps = 18/281 (6%) Query: 15 SFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETT 74 S + + LF + + Q+++ +N + + + + + G+ LP + + Sbjct: 16 SGIFTALFAIMV--TTQLIRLLNEAAQGGVAPDAVAALLGFASLNYLPPLLSLSMFVAIL 73 Query: 75 NVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSA 134 L+ R++E+++ ++G I+PVL AI L + + P S + Sbjct: 74 LTLSRCYRDSEMVVWFSSGLPLTAWIRPVLVFAIPLVATIAALSFFLSPWAVSQSAEYRG 133 Query: 135 KAQLALTFSYLEENLFFR--LDDDLYIKISKYNPNNTLQGIFIVDSRDTQ---THKIYYA 189 K + + F D + + ++ +F+ ++++ + T + Sbjct: 134 KLSIRKDAGEVSPGTFHESSAGDRVVFVEGIAEDTSQVRNVFVSETKEGRVGVTMAVTGH 193 Query: 190 QSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSF 249 Q + + DR I+L DG + +P S ++ I+++ Y ++ E+ + I L Sbjct: 194 QEIAANGDR-FIVLQDGRRYELAPASPEVRILEYVRYAVRLETKEARGITPTPKSMPLRE 252 Query: 250 LLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 LL P L YR+E RL+ V+ L++I Sbjct: 253 LL----------PVDLPAYRAELLWRLSIPCSAVVMALLAI 283 >gi|225851251|ref|YP_002731485.1| putative permease, YjgP/YjgQ family [Persephonella marina EX-H1] gi|225646479|gb|ACO04665.1| putative permease, YjgP/YjgQ family [Persephonella marina EX-H1] Length = 337 Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust. Identities = 38/166 (22%), Positives = 74/166 (44%), Gaps = 10/166 (6%) Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLA-ILLSIFLFISENIIEPKC 125 F F + T + +M N E+ + + G ++ LIKP++ ++ I+ ++ L +S ++ Sbjct: 65 FAFFLSTALLGFNMRENREIYAVYSAGITKGQLIKPLVVISLIIFTVSLIVSMFVVPYAN 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHK 185 R K ++ + + E+N FF+L D++ I K N + +FI + QT Sbjct: 125 RERAKFITLNIKRYFLDAVQEKN-FFQLSDNVTIYTEK-KEGNRFENVFIYNRERGQT-- 180 Query: 186 IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 + D L G + P K +I++F+SY + Sbjct: 181 ---ISAKEAFFDTTTFFLKKGYIQ--IPDEKGFNILRFESYRFNID 221 >gi|312795337|ref|YP_004028259.1| hypothetical protein RBRH_03151 [Burkholderia rhizoxinica HKI 454] gi|312167112|emb|CBW74115.1| Hypothetical membrane spanning protein [Burkholderia rhizoxinica HKI 454] Length = 365 Score = 41.2 bits (95), Expect = 0.29, Method: Compositional matrix adjust. Identities = 37/196 (18%), Positives = 84/196 (42%), Gaps = 24/196 (12%) Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLA----ILLSIFLFISENIIEPKCRSTIKQ 131 VLT R++E+++ + G S LIKP+ A +L++ F F+ + + ++ Sbjct: 75 VLTRWYRDSEMVVWLSCGVSLTRLIKPIATFAAPIVVLIAFFAFVGWPWANEQSKLIRER 134 Query: 132 LSAKAQLALTF------SYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSRDTQTH 184 + +++L S +FF I K +P+ ++ +F+ + + + + Sbjct: 135 FQQRDEVSLLAPGQFRESAANHRVFF---------IEKMSPDQGRVENVFVTSTENGKVN 185 Query: 185 KIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + +++G ++ ++L +G + P D IM+F Y ++ +S Sbjct: 186 -VVVSKTGHTEIHPNGDRFVVLENGRRYDGEPGKPDFRIMEFARYGVKIQSRQLVNRPTT 244 Query: 242 ANDQNLSFLLNPNPNN 257 + + L PNP + Sbjct: 245 TSLPTATLLREPNPTH 260 >gi|160898977|ref|YP_001564559.1| permease YjgP/YjgQ family protein [Delftia acidovorans SPH-1] gi|160364561|gb|ABX36174.1| permease YjgP/YjgQ family protein [Delftia acidovorans SPH-1] Length = 375 Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust. Identities = 59/276 (21%), Positives = 113/276 (40%), Gaps = 27/276 (9%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 F+ I + + RSF + + ++ + + +++ + S + +L + GY + LP Sbjct: 3 FDSSIRKELARSFGATVVVLITVVMTMMLIRTLGQAYKGNVSPSDVLLVMGYTVLGQLPT 62 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVL-FLAILLSIFLFISENIIE 122 + + L+ M R++E++I G +L++P+L F +L++ + I+ Sbjct: 63 ILGLGLFVAVVGSLSRMYRDSEMVIWFAAGQGLASLLRPLLRFAWPVLAVIAVLGLGIL- 121 Query: 123 PKCRSTIKQLSAK----------AQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQG 172 P I+Q+ + A S +FF +D D+ S NN Sbjct: 122 PWANQQIEQIKTQFEQRSDIDRIAPGEFQESAGGSRVFF-IDKDVP---SATAANN---- 173 Query: 173 IFIVDSRDTQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ 229 +FIV + + + A+ +++ +R A +L DG+ + I +FK Y Q Sbjct: 174 VFIV-ANERGRESVTSARGARLEVIKGERMA-VLTDGQRMETQTSDGSVKISEFKEYGTQ 231 Query: 230 TESA-NSSTIVLKANDQNLSFLLNPNPNNPNYRPEL 264 S N + A + L P P YR EL Sbjct: 232 LGSGSNLAAAEEMAARSTYTHELLPR-TEPIYRAEL 266 >gi|209519258|ref|ZP_03268060.1| permease YjgP/YjgQ family protein [Burkholderia sp. H160] gi|209500338|gb|EEA00392.1| permease YjgP/YjgQ family protein [Burkholderia sp. H160] Length = 365 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 40/191 (20%), Positives = 81/191 (42%), Gaps = 14/191 (7%) Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLA----ILLSIFLFISENIIEPKCRSTIKQ 131 VLT +++E+++ ++G S IKP+ A IL+ F+F+ P K Sbjct: 75 VLTRWYKDSEMVVWLSSGVSLARFIKPIGIFATPIIILIMFFVFVG----WPWSNQQSKL 130 Query: 132 LSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYNPNNT-LQGIFIVDSRDTQTHKIYYA 189 + A+ Q S L F + I K +P+ ++ +F+ + + + + + Sbjct: 131 IRARFQQRDEVSLLAPGQFRESPTTHRVFFIEKMSPDQGHVENVFVTSTEGGKVN-VVVS 189 Query: 190 QSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 ++G I+ + ++L +G + P D IM+F+ Y ++ +S Sbjct: 190 KNGHIETHKNGDRFVVLENGRRYDGEPGHPDFRIMEFERYGVKIQSQPVVNTPTTTGLPT 249 Query: 247 LSFLLNPNPNN 257 ++ L NP N Sbjct: 250 MTLLRNPTNEN 260 >gi|205356326|ref|ZP_03223091.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni CG8421] gi|205345711|gb|EDZ32349.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni CG8421] Length = 341 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 79/339 (23%), Positives = 131/339 (38%), Gaps = 56/339 (16%) Query: 9 LRCIGRSFL---MSCLFIVF-IAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 LR + FL +S F++F I ++ +Q L SS S LLK+ G+++P +L Sbjct: 5 LRYVLNQFLSTNLSIFFVLFAIVSMVFFIQLAKLTSSIEISFLDLLKLYGFMLPRILIFT 64 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P F + T L +++ E +++ G S + L K L +A L+S F+ + ++ P Sbjct: 65 LPISFFISLTLALFRLSKENESIVLFTLGFSPMILAKFFLKIASLISAFMLVVALVMIPI 124 Query: 125 CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTH 184 + F+Y K ++ L + ++ +D+ + Sbjct: 125 VFELQDNFVNYKSTQVKFNY---------------KTGEFG-QKFLDWMIFIEKQDSDKY 168 Query: 185 K--IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE----SANSSTI 238 + I Y D Q II + V RK S S+ + K Y + S T+ Sbjct: 169 ENIIMYRPKHKADDKEQLIIAKEAHVQRKDD-SFAFSLNQGKMYNFEQGQSIFSGEFDTL 227 Query: 239 VLKA-----NDQNLSFL-----LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 V+ N Q F LN NP EF +T LFP L Sbjct: 228 VVNTQFNTDNLQTKKFYEYWNDLNENPQRAR-----------EFVIYITIALFP----LA 272 Query: 289 SIVAADKRALVRQRKKIHPIFISL----SISFGVFWGFS 323 S + A LV R + +++ + +I FG+ FS Sbjct: 273 STLFALCFGLVTYRYEKGYVYLGMFGVIAIYFGLLSSFS 311 >gi|295675785|ref|YP_003604309.1| permease YjgP/YjgQ family protein [Burkholderia sp. CCGE1002] gi|295435628|gb|ADG14798.1| permease YjgP/YjgQ family protein [Burkholderia sp. CCGE1002] Length = 365 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 39/191 (20%), Positives = 81/191 (42%), Gaps = 14/191 (7%) Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLA----ILLSIFLFISENIIEPKCRSTIKQ 131 VLT +++E+++ ++G S IKP+ A IL+ F+F+ P K Sbjct: 75 VLTRWYKDSEMVVWLSSGVSLTQFIKPIGIFATPIIILIMFFVFVG----WPWSNQQSKL 130 Query: 132 LSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYNPNNT-LQGIFIVDSRDTQTHKIYYA 189 + A+ Q S L F + I K +P+ ++ +F+ + + + + + Sbjct: 131 IRARFQQRDEVSLLAPGQFRESPSTHRVFFIEKMSPDQGHVENVFVTSTEGGKVN-VVVS 189 Query: 190 QSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 ++G ++ + ++L +G + P D IM+F+ Y ++ +S Sbjct: 190 KNGHVETHKNGDRFVVLENGRRYDGEPGHPDFRIMEFERYGVKIQSQPVVNTPTTTGLPT 249 Query: 247 LSFLLNPNPNN 257 ++ L NP N Sbjct: 250 MTLLRNPTNEN 260 >gi|33861942|ref|NP_893503.1| putative permease [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33640310|emb|CAE19845.1| possible permease [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 400 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 37/181 (20%), Positives = 82/181 (45%), Gaps = 19/181 (10%) Query: 46 LNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLF 105 L + +K+ + +P+ L + P + T ++ N+ELL + + G +I P + Sbjct: 69 LFLAIKVLFFSLPSFLVLSFPMAVLLSTLLAYGKLSANSELLALKSLGIKTSRIIAPAIA 128 Query: 106 LAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLE--ENLFF-----RLDDDL- 157 ++IL++ F + + P + + + + +A + +FS E +N+ F R++ Sbjct: 129 VSILMTGLTFYFNDNLVPSS-NKLAESTLRAGIGSSFSSEEGKDNIMFSRYGSRIESATN 187 Query: 158 ----------YIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGE 207 +I + + NN +QG+ ++D +I A+S D + + I +DG Sbjct: 188 KPTKTNTFLTHIFYASWFENNIMQGVTVLDFSRQDIQQILKAKSAVFDKENSSWIFSDGS 247 Query: 208 V 208 + Sbjct: 248 I 248 >gi|323525104|ref|YP_004227257.1| permease YjgP/YjgQ family protein [Burkholderia sp. CCGE1001] gi|323382106|gb|ADX54197.1| permease YjgP/YjgQ family protein [Burkholderia sp. CCGE1001] Length = 365 Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust. Identities = 36/166 (21%), Positives = 75/166 (45%), Gaps = 14/166 (8%) Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLA----ILLSIFLFISENIIEPKCRSTIKQ 131 VLT +++E+++ ++G S IKP+ A IL+ F+F+ P K Sbjct: 75 VLTRWYKDSEMVVWLSSGVSLTQFIKPIGMFATPIVILIMFFVFVGW----PWSNQQSKL 130 Query: 132 LSAKAQLALTFSYLEENLFFRLDDDLYIK-ISKYNPNNT-LQGIFIVDSRDTQTHKIYYA 189 + A+ Q S L F + I K +P+ ++ +F+ + + + + + + Sbjct: 131 IRARFQQRDEVSLLAPGQFRESASTHRVFFIEKMSPDQGHVENVFVTSTENGKVN-VVVS 189 Query: 190 QSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 ++G + + ++L +G + P D IM+F+ Y ++ ES Sbjct: 190 KNGHTETHKNGDRFVVLENGRRYEGEPGHPDFRIMEFERYGVKIES 235 >gi|229495721|ref|ZP_04389449.1| permease, YjgP/YjgQ family [Porphyromonas endodontalis ATCC 35406] gi|229317295|gb|EEN83200.1| permease, YjgP/YjgQ family [Porphyromonas endodontalis ATCC 35406] Length = 658 Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust. Identities = 40/188 (21%), Positives = 78/188 (41%), Gaps = 9/188 (4%) Query: 18 MSCLFIVF-IAWVIQILQ----RINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAME 72 M L + F I W + ++Q R + + +L+++ + LP TP + Sbjct: 18 MPLLVMTFVICWFVVLMQMLWSRADEIVGRGLDTWVLIQLLFHAAVMALPTATPLGILLA 77 Query: 73 TTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQL 132 + + ELL + + G ++ P+ + I + + LF+ N + Q+ Sbjct: 78 SVMTFGGLGERLELLAMKSAGVPLYRIMSPLFVVGITIGLALFVYLNTAMMDAQVKFFQI 137 Query: 133 SAKAQLALTFSYLEENLFFRL--DDDLYIKISKYNPNNTLQGIFIVD-SRDTQTHKIYYA 189 AQ + + + +F+ L++K K + N TL + I D SR + +I A Sbjct: 138 IFSAQQSRPDLEIPQGVFYNQIPGYSLFVK-KKDHENRTLHELMIYDFSRGSSQPRIVLA 196 Query: 190 QSGSIDLD 197 SG + +D Sbjct: 197 DSGKLQMD 204 >gi|255535566|ref|YP_003095937.1| hypothetical protein FIC_01427 [Flavobacteriaceae bacterium 3519-10] gi|255341762|gb|ACU07875.1| membrane protein, putative [Flavobacteriaceae bacterium 3519-10] Length = 484 Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust. Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 7/148 (4%) Query: 1 MKSFELYILRCIGRSFLM--SCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIP 58 +K + Y+++ FL S LF +F+ +I I ++ + S +LK+ YL Sbjct: 2 IKKLDGYVIKSFLGPFLFIFSVLFFIFVVNIIWI--QLAQFTGKGLSYWEILKLLAYLSV 59 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 V+ +V P + + EL + G S ++ P+ ++I LS FLF+ Sbjct: 60 KVVQLVLPLTILLSSIMTFGDFGERYELAAMKAAGISLTRIMMPLFVVSIALSFFLFLFS 119 Query: 119 NIIEPKCRSTIKQLS---AKAQLALTFS 143 N + P + K + A + AL FS Sbjct: 120 NNVIPDFQRKAKNMLYNIAATKPALNFS 147 >gi|288572984|ref|ZP_06391341.1| permease YjgP/YjgQ family protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288568725|gb|EFC90282.1| permease YjgP/YjgQ family protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 365 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 43/197 (21%), Positives = 93/197 (47%), Gaps = 14/197 (7%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRI-NLVSSSTESLNILLKISGYLIPTVLPMVT 65 +IL+ +G SFL L I +L +I +++ SL+ +LK+ Y +P+V+ + Sbjct: 9 FILKELGSSFLFGVLTFTVILVAGDLLFKIADMLIEKGVSLSTVLKLFVYKLPSVVVLTL 68 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSI-FLFISENIIEPK 124 P + T ++ N+E++ + +G S + +PVL A L++I F++E ++ Sbjct: 69 PMSCLLSTLLSFGRLSSNSEIVALKASGISFQRIARPVLLGASLVAISAFFMNETVVPIA 128 Query: 125 CRST--------IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 R+ +KQ K L +L++ +L+ +Y+ + +++ + + Sbjct: 129 NRAAENILMYDVVKQ---KPTLLRERMFLKDESGGKLNRVIYVGRLRTR-KGSMENVLVQ 184 Query: 177 DSRDTQTHKIYYAQSGS 193 + D + +I A G+ Sbjct: 185 EFDDGRLSRITTADEGN 201 >gi|225619415|ref|YP_002720641.1| Permease [Brachyspira hyodysenteriae WA1] gi|225214234|gb|ACN82968.1| Permease [Brachyspira hyodysenteriae WA1] Length = 356 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 31/124 (25%), Positives = 52/124 (41%), Gaps = 1/124 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+L+ F S L V + + + R++ + E +N + P Sbjct: 1 MKKLNAYLLKEFLSFFFGSLLLFVVLVTIADLSSRLSFYTEHPELINYFITYHLARAPHN 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFL-FISEN 119 + P +T VL + +N E+L I+N+G S P+ + I L +FL F E Sbjct: 61 TYYIFPVALMFSSTYVLGTFVKNKEMLAIENSGISLFKFSMPMFIIVIGLCLFLVFFWEF 120 Query: 120 IIEP 123 + P Sbjct: 121 VAAP 124 >gi|83721258|ref|YP_441378.1| permease [Burkholderia thailandensis E264] gi|167580136|ref|ZP_02373010.1| permease, putative [Burkholderia thailandensis TXDOH] gi|257139949|ref|ZP_05588211.1| permease, putative [Burkholderia thailandensis E264] gi|83655083|gb|ABC39146.1| permease, putative [Burkholderia thailandensis E264] Length = 365 Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust. Identities = 42/191 (21%), Positives = 80/191 (41%), Gaps = 14/191 (7%) Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLA----ILLSIFLFISENIIEPKCRSTIKQ 131 VLT +++E+++ +G S LIKP+ A IL++ F F+ P K Sbjct: 75 VLTRWYKDSEMVVWLASGVSLTRLIKPIGVFATPIVILIAFFAFVG----WPWSNQQSKL 130 Query: 132 LSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYNPNNT-LQGIFIVDSRDTQTHKIYYA 189 + A+ Q S L F + + I K +P+ +Q +F+ + + + + + Sbjct: 131 IKARFQQRDEVSLLAPGQFRESAANHRVFFIEKMSPDQAKVQNVFVTTTEHGKVN-VVVS 189 Query: 190 QSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 Q+G + + I+L +G + P + IM+F+ Y ++ +S + Sbjct: 190 QTGHTETMKNGDRFIVLENGRRYDGVPGQPNFKIMEFERYGVKIQSKQVVSQPTTTGTST 249 Query: 247 LSFLLNPNPNN 257 L NP N Sbjct: 250 PDLLRNPTNQN 260 >gi|86150264|ref|ZP_01068491.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni CF93-6] gi|88597526|ref|ZP_01100760.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 84-25] gi|218562454|ref|YP_002344233.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85839380|gb|EAQ56642.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni CF93-6] gi|88190118|gb|EAQ94093.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 84-25] gi|112360160|emb|CAL34954.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284926071|gb|ADC28423.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni IA3902] gi|315927714|gb|EFV07043.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 341 Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust. Identities = 69/297 (23%), Positives = 116/297 (39%), Gaps = 33/297 (11%) Query: 9 LRCIGRSFL---MSCLFIVF-IAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 LR + FL +S F++F I ++ +Q L SS S LLK+ G+++P +L Sbjct: 5 LRYVLNQFLSTNLSIFFVLFAIVSMVFFIQLAKLTSSIEISFLDLLKLYGFMLPRILIFT 64 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P F + T L +++ E +++ G S + L K L +A L+S F+ + ++ P Sbjct: 65 LPISFFISLTLALFRLSKENESIVLFTLGFSPMILAKFFLKIASLISAFMLVVALVMIPI 124 Query: 125 CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTH 184 + F+Y K ++ L + ++ +D+ + Sbjct: 125 VFELQDNFVNYKSTQVKFNY---------------KTGEFG-QKFLDWMIFIEKQDSDKY 168 Query: 185 K--IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE----SANSSTI 238 + I Y D Q II + V RK S S+ + K Y + S T+ Sbjct: 169 ENIIMYRPKHKADDKEQLIIAKEAHVQRKDD-SFAFSLNQGKMYNFEQGQSIFSGEFDTL 227 Query: 239 VLKA-----NDQNLSFLLNPNPNNPNY-RPELLETYRSEFHKRLTQWLFPVIFGLIS 289 V+ N Q F N N N R Y + L LF + FGL++ Sbjct: 228 VVNTQFNTDNLQTKKFYEYWNDLNENLQRAREFVIYTTIALFPLASTLFALCFGLVT 284 >gi|188996313|ref|YP_001930564.1| permease YjgP/YjgQ family protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188931380|gb|ACD66010.1| permease YjgP/YjgQ family protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 336 Score = 40.8 bits (94), Expect = 0.37, Method: Compositional matrix adjust. Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 18/170 (10%) Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC- 125 F F + V S+ E+ + + G S+ L+KPV + ++ I F+ +I P Sbjct: 65 FAFFISWLLVGISLRDKNEIYAVYSAGISKKQLLKPVFIMTVIFVIIAFVFSTVIVPSAN 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENL----FFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 R K L+ K + SY+ EN+ F +++D++ + + K NT I I ++ + Sbjct: 125 RERYKFLTYKVK-----SYILENVSPKNFSKINDNVSVYVEK-KEKNTFYNILIYNASNG 178 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 + A+ G +IL DG + P K +K++ YT + Sbjct: 179 Y---LITAKEGM--FISNNLILKDGYIQL--PSEKSFDTIKYEKYTFSLD 221 >gi|226227978|ref|YP_002762084.1| hypothetical protein GAU_2572 [Gemmatimonas aurantiaca T-27] gi|226091169|dbj|BAH39614.1| hypothetical protein [Gemmatimonas aurantiaca T-27] Length = 578 Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust. Identities = 30/137 (21%), Positives = 54/137 (39%), Gaps = 1/137 (0%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 +P + M P + T M E+ +G T++ PVLF A+LLS+F+ Sbjct: 57 LPFTVAMTLPMAVLVATLYAFGRMAAEHEITAFKASGVRVRTMMLPVLFCALLLSLFMVW 116 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFI 175 + + P + L L + + D ++++++ + N + + I Sbjct: 117 FNDQVLPAANHRLSMLQRDIARTKPTLALRDQALNAITDQFFMRVARTDAETNRMYDVVI 176 Query: 176 VDSRDTQTHKIYYAQSG 192 D Q K YA SG Sbjct: 177 YDLSRGQERKTIYADSG 193 >gi|257462589|ref|ZP_05626999.1| hypothetical protein FuD12_01974 [Fusobacterium sp. D12] gi|317060240|ref|ZP_07924725.1| conserved hypothetical protein [Fusobacterium sp. D12] gi|313685916|gb|EFS22751.1| conserved hypothetical protein [Fusobacterium sp. D12] Length = 361 Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust. Identities = 46/215 (21%), Positives = 95/215 (44%), Gaps = 15/215 (6%) Query: 1 MKSFELYILRCIGRSF---LMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLI 57 MK ++YI + + F L S L I ++ + ++L+ +N S + + + G L+ Sbjct: 1 MKKLDIYITKNFLKYFSYSLFSFLAIFVLSQIFKVLRYVNEGQLSAGEVPLFI---GNLL 57 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 P ++ V P + + M N E++ + +G L++ + ++ +S+ +F Sbjct: 58 PGIIINVAPLAVLLGGLISINIMASNLEIISLKTSGIRFARLVRGPILVSFFISLVVFYL 117 Query: 118 ENIIEPKCRSTIKQLSAKAQL-ALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF-- 174 + + P ++L K + +EN FFR ++ Y+ K N +GI Sbjct: 118 NDRVYPGSVVRNRELRGKEDVEERELPKEKENAFFRNEEGRYVYYMK--KINREKGIMDY 175 Query: 175 --IVD-SRD-TQTHKIYYAQSGSIDLDRQAIILND 205 I+D S D + +I A+ G D +++ I + Sbjct: 176 VEILDMSEDFDKIERIITAKQGKYDFEKKIWIFKE 210 >gi|224373192|ref|YP_002607564.1| putative permease YjgP/YjgQ [Nautilia profundicola AmH] gi|223589644|gb|ACM93380.1| putative permease YjgP/YjgQ [Nautilia profundicola AmH] Length = 323 Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust. Identities = 41/184 (22%), Positives = 77/184 (41%), Gaps = 16/184 (8%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 +P VL + F + ++ + EL+ + ++G TL+KP LFL++LL+I + Sbjct: 57 LPKVLFITLSISFFISAVSLFAKHSETQELIALFSSGVKPYTLLKPFLFLSLLLTIVNLL 116 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 I P + K + Q A F++ + R + SK T + I + Sbjct: 117 ILFISIPYAKVAFKNFKNQKQQAAKFNFQTSQISQRFGNWNIFTSSK--KGKTYENIILY 174 Query: 177 DSRDTQTHKIYYAQ-------------SGSIDLDRQAIILNDGEVHRKSPISK-DISIMK 222 ++++ Q YA+ G++ ++ I+N G++ I K SI + Sbjct: 175 NNKENQLILAKYAELKNKNGYLNFELKKGNVYAFDKSTIINFGKMQINQKIPKSSYSIFR 234 Query: 223 FKSY 226 F Y Sbjct: 235 FSEY 238 >gi|19704366|ref|NP_603928.1| hypothetical protein FN1031 [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296327426|ref|ZP_06869973.1| YjgP/YjgQ family permease [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|19714618|gb|AAL95227.1| Hypothetical membrane-spanning protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296155439|gb|EFG96209.1| YjgP/YjgQ family permease [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 359 Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust. Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 10/160 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YIL + +++ FI + ++ + + S+ +L++ + IP + Sbjct: 1 MKIINKYILDELKGPIILAVFVFTFIFLLDIVVTMMEHIIVKGISVFDVLRLLSFYIPPI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFL-FISEN 119 L P + T +RN+E + + +TG S ++KP+L +AI SIF+ F+ E+ Sbjct: 61 LTQTIPIGMFLGIMICFTKFSRNSESVAMVSTGMSIRDILKPILAIAIGASIFIVFLQES 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI 159 II RS IK ++A EN F+L + +I Sbjct: 121 IIP---RSFIKLKYVGTKIAY------ENPVFQLKEKTFI 151 >gi|16125936|ref|NP_420500.1| hypothetical protein CC_1691 [Caulobacter crescentus CB15] gi|221234699|ref|YP_002517135.1| hypothetical protein CCNA_01762 [Caulobacter crescentus NA1000] gi|13423102|gb|AAK23668.1| conserved hypothetical protein [Caulobacter crescentus CB15] gi|220963871|gb|ACL95227.1| hypothetical membrane spanning protein [Caulobacter crescentus NA1000] Length = 379 Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust. Identities = 29/162 (17%), Positives = 68/162 (41%) Query: 33 LQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNT 92 L +++ +S + LKI +P +L ++ P + L ++ E+++ Sbjct: 33 LSEFDVLVEQRQSALVFLKIILLALPQLLGIMMPLALFVAALVALNRLHTEQEIVVCFAG 92 Query: 93 GTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFR 152 G SR +I P + LA++ ++ IS ++P I++ + + + + + ++ F Sbjct: 93 GMSRWRVISPAMRLAVIAALISLISGLWLQPWSARQIRETAFQIKTDVAATLVQPGQFTE 152 Query: 153 LDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSI 194 L + + +N +Q +FI Y ++ I Sbjct: 153 PGPGLTVYAQSIDRDNKIQNLFIHQELPNGAASTYSSREAEI 194 >gi|325285312|ref|YP_004261102.1| permease YjgP/YjgQ family protein [Cellulophaga lytica DSM 7489] gi|324320766|gb|ADY28231.1| permease YjgP/YjgQ family protein [Cellulophaga lytica DSM 7489] Length = 341 Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust. Identities = 54/263 (20%), Positives = 115/263 (43%), Gaps = 37/263 (14%) Query: 78 TSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQ 137 + + NTE++ I ++G S ++P A +++I +F+ I PK + Sbjct: 60 SKLASNTEIVAILSSGVSFGRFLRPYFMGATIIAILMFVMAMFIVPKASLDYHE------ 113 Query: 138 LALTFSYLEE--------NLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYA 189 F YL++ N++ +L+++ ++ IS ++PN L F+++ D Y Sbjct: 114 --FIFKYLKKGKKFQETTNIYNQLNENEFLYISSFDPNRQLGSNFVLEHFDNDDKLAYKL 171 Query: 190 QSGSID-LDRQAIILNDGEVHRKSPISKDISIMKFKS-----YTLQTESANSSTIVLKAN 243 + SI + + I G R + ++ +++ KS + + + + V A Sbjct: 172 TASSIRWIPKDTIYRLTGFTSR--TVKGNVEVIEKKSRLDTIFDFKIDDLTPVSYV--AE 227 Query: 244 DQNLSFLLNPNPNNPNYRPEL-LETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 +N+ F LN + + + TY +KR W PV +++++A ++ R+ Sbjct: 228 TKNI-FELNKFIEDQRKKGASNINTYVMAKYKR---WALPVSAFILTLIAVSVSSIKRRG 283 Query: 303 KKIHPIFISLSISFGVFWGFSYI 325 + L+++FG+ F YI Sbjct: 284 G------MGLNLAFGIVIAFVYI 300 >gi|188583149|ref|YP_001926594.1| permease YjgP/YjgQ family protein [Methylobacterium populi BJ001] gi|179346647|gb|ACB82059.1| permease YjgP/YjgQ family protein [Methylobacterium populi BJ001] Length = 362 Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust. Identities = 35/168 (20%), Positives = 70/168 (41%), Gaps = 8/168 (4%) Query: 30 IQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLII 89 +++L+R S S ++ +++ Y P V V PF + L ++R EL++ Sbjct: 36 VELLRRAG--DSEGASTGLMAQLALYRTPAVAESVLPFAVLFGSMAALLQLSRKLELVVA 93 Query: 90 DNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENL 149 G S ++P F+A+ + + N + + ++ AK T + ++L Sbjct: 94 RAAGISAWQFLQPGAFVALAIGALAIGAYNPLSAALKQRSSEIEAKIFAKSTKAGTGKDL 153 Query: 150 FFR---LDDDLYIKI-SKYNPNNTLQG--IFIVDSRDTQTHKIYYAQS 191 + R +D I+ + TL G +F D T +I A++ Sbjct: 154 WLRQRSVDGQAIIRAETAVEGTTTLAGVTVFQFDDAGVFTAQIEAARA 201 >gi|239616611|ref|YP_002939933.1| permease YjgP/YjgQ family protein [Kosmotoga olearia TBF 19.5.1] gi|239505442|gb|ACR78929.1| permease YjgP/YjgQ family protein [Kosmotoga olearia TBF 19.5.1] Length = 1466 Score = 40.4 bits (93), Expect = 0.45, Method: Compositional matrix adjust. Identities = 43/200 (21%), Positives = 89/200 (44%), Gaps = 5/200 (2%) Query: 10 RCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCF 69 + +G F+ F++F++ + + Q +L+ ++ L + Y +P + + P Sbjct: 11 QSMGAFFIGLGGFLIFVSLEL-LYQLSDLIVRYKVGIDKLFLLIYYNLPYFIVLGIPVGV 69 Query: 70 AMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTI 129 + L+ M + EL+ + G + T++ P + A+LLS ++ + I P Sbjct: 70 LLAIFWTLSRMQSDNELIALQTHGITLKTVVLPFVIFAVLLSGITYLFNDYIVPYANRKA 129 Query: 130 KQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSRDTQTHKIYY 188 + A+ L+EN F Y+ I K +P L+ I + D +T ++ Sbjct: 130 YEAQARFIYRRPEVTLKENAFMEDGKGRYLYIKKIDPETGELKKILLYDLSGGKT-RVTS 188 Query: 189 AQSGSIDLDRQAIILNDGEV 208 A+S + + D+ I++DG V Sbjct: 189 AKSATKEGDKW--IMHDGRV 206 >gi|326565140|gb|EGE15331.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis 103P14B1] gi|326572841|gb|EGE22826.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis CO72] gi|326573713|gb|EGE23671.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis O35E] Length = 437 Score = 40.4 bits (93), Expect = 0.46, Method: Compositional matrix adjust. Identities = 42/227 (18%), Positives = 93/227 (40%), Gaps = 26/227 (11%) Query: 22 FIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMN 81 F+V I ++++ + + ++ +L ++ GY P L ++ P F + V + Sbjct: 76 FLVVILLGGRLIRYFGMAAEGGLNVGVLFRLIGYNFPYFLELILPLSFFIGLMLVFGRLY 135 Query: 82 RNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALT 141 + E+ +++ +G SR + + ++ L ++L + +P + + +A Sbjct: 136 TDHEMTVMNASGISRGRVARLLMPLVVVLMCIEGWVSMVAKPWGMERATNIWQEQSVAQV 195 Query: 142 FSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIV--------DSRDTQTHK---IYYA 189 F + F D ++ + + N L+ + I+ D + Q+H+ I +A Sbjct: 196 FDLIRPQEFIS-SGDYHLYVGEMGANREFLKDVIIIQMHTAEPSDIQSRQSHQRDSIIFA 254 Query: 190 QS--------GSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 +S G I LD L G + P S+ S + F+ Y + Sbjct: 255 KSATHVETGNGQIQLD-----LQQGRRYEVDPTSRQYSQIGFERYRM 296 >gi|115379870|ref|ZP_01466933.1| permease YjgP/YjgQ, putative [Stigmatella aurantiaca DW4/3-1] gi|115363129|gb|EAU62301.1| permease YjgP/YjgQ, putative [Stigmatella aurantiaca DW4/3-1] Length = 342 Score = 40.4 bits (93), Expect = 0.46, Method: Compositional matrix adjust. Identities = 53/259 (20%), Positives = 107/259 (41%), Gaps = 25/259 (9%) Query: 55 YLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFL 114 YL P L P F M L ++ + EL + G S + L+ + + +LL+ + Sbjct: 26 YLTPHFLVKALPIAFLMAILLGLGRLSEDRELTALQALGISPVQLLLGPMAIGLLLAGLM 85 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI---KISKYNPNNTLQ 171 + +P +++K+L + ++ +F+ DL + ++S+ T Sbjct: 86 ALLAFTAQPWGLTSVKELVNEVIKKNVAGDVKSGVFYEDLSDLTLYAERVSREGGEWTH- 144 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQA-----IILNDGEVHRKSPISKDISIMKFKSY 226 + + D R+ + + AQ G + + R+ ++L +GEVHR + + D S+++F+ Sbjct: 145 -VLLHDDREPSSPLLVLAQRGRVSM-REGDEALRLVLEEGEVHRATRSTADYSLLRFEQG 202 Query: 227 TLQ---TESANSSTIVLKANDQNLS------FLLNPNPNNPNYRPELLETYRSEFHKRLT 277 + S N + ++ + +S + N RP L+ H RL Sbjct: 203 EISVGLGGSMNRKSNRFRSQKEEMSPGELIQAAEEAEKSGGNPRPFLM-----AIHMRLG 257 Query: 278 QWLFPVIFGLISIVAADKR 296 + P+ F L+ A R Sbjct: 258 NAVAPLSFALLGTPLAIGR 276 >gi|192291843|ref|YP_001992448.1| permease YjgP/YjgQ family protein [Rhodopseudomonas palustris TIE-1] gi|192285592|gb|ACF01973.1| permease YjgP/YjgQ family protein [Rhodopseudomonas palustris TIE-1] Length = 362 Score = 40.4 bits (93), Expect = 0.46, Method: Compositional matrix adjust. Identities = 21/79 (26%), Positives = 37/79 (46%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 +P +L + PFC + +++R+ EL++ G S I P L+ AI + IF Sbjct: 60 VPQLLERLLPFCILIGGMTCYLALSRSLELVVARAAGLSAWEFISPALWSAIAIGIFATT 119 Query: 117 SENIIEPKCRSTIKQLSAK 135 N + + KQ+ A+ Sbjct: 120 VFNPLSAHMQERAKQMEAE 138 >gi|39936125|ref|NP_948401.1| permease YjgP/YjgQ [Rhodopseudomonas palustris CGA009] gi|39649979|emb|CAE28503.1| predicted permease [Rhodopseudomonas palustris CGA009] Length = 361 Score = 40.4 bits (93), Expect = 0.46, Method: Compositional matrix adjust. Identities = 21/79 (26%), Positives = 37/79 (46%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 +P +L + PFC + +++R+ EL++ G S I P L+ AI + IF Sbjct: 59 VPQLLERLLPFCILIGGMTCYLALSRSLELVVARAAGLSAWEFISPALWSAIAIGIFATT 118 Query: 117 SENIIEPKCRSTIKQLSAK 135 N + + KQ+ A+ Sbjct: 119 VFNPLSAHMQERAKQMEAE 137 >gi|212636934|ref|YP_002313459.1| permease YjgP/YjgQ [Shewanella piezotolerans WP3] gi|212558418|gb|ACJ30872.1| Permease YjgP/YjgQ [Shewanella piezotolerans WP3] Length = 352 Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust. Identities = 39/181 (21%), Positives = 82/181 (45%), Gaps = 1/181 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +LYI + + S +S L + ++ +I+ + ++ LV T S+ +LIP Sbjct: 1 MRILDLYIAKVLISSSSLSLLILTGLSGIIKWVDQLRLVGRGTYSMMDAGIYVLFLIPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + + N+EL+++ ++G SR+ + + AI L I + + Sbjct: 61 IEMFFPMAVLLGALTGMGMLASNSELVVMQSSGLSRLQIALSAMKTAIPLMILVMLLSEY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P K++ + Q++ + D DL++ I +N L+ I + + D Sbjct: 121 VAPVAEVRAKEIQ-RTQISGGSLIESTRGVWAKDGDLFVNIGGVVDSNNLRDITLYEFDD 179 Query: 181 T 181 T Sbjct: 180 T 180 >gi|167835784|ref|ZP_02462667.1| hypothetical protein Bpse38_04783 [Burkholderia thailandensis MSMB43] Length = 365 Score = 40.4 bits (93), Expect = 0.48, Method: Compositional matrix adjust. Identities = 42/191 (21%), Positives = 80/191 (41%), Gaps = 14/191 (7%) Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLA----ILLSIFLFISENIIEPKCRSTIKQ 131 VLT +++E+++ +G S LIKP+ A IL++ F F+ P K Sbjct: 75 VLTRWYKDSEMVVWLASGVSLTRLIKPIGVFATPIVILIAFFAFVG----WPWSNQQSKL 130 Query: 132 LSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYNPNNT-LQGIFIVDSRDTQTHKIYYA 189 + A+ Q S L F + + I K +P+ +Q +F+ + + + + + Sbjct: 131 IKARFQQRDEVSLLAPGQFRESAANHRVFFIEKMSPDQAKVQNVFVTTTEQGKVN-VVVS 189 Query: 190 QSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 Q+G + + I+L +G + P + IM+F+ Y ++ +S + Sbjct: 190 QTGHTETMKNGDRFIVLENGRRYDGVPGQPNFKIMEFERYGVKIQSKQIVSQPTTTGTST 249 Query: 247 LSFLLNPNPNN 257 L NP N Sbjct: 250 PDLLRNPTNQN 260 >gi|109899861|ref|YP_663116.1| permease YjgP/YjgQ [Pseudoalteromonas atlantica T6c] gi|109702142|gb|ABG42062.1| permease YjgP/YjgQ [Pseudoalteromonas atlantica T6c] Length = 353 Score = 40.4 bits (93), Expect = 0.48, Method: Compositional matrix adjust. Identities = 33/175 (18%), Positives = 79/175 (45%), Gaps = 1/175 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K + YI R + + MS +V ++ +I+ ++++ V + + + +P Sbjct: 2 IKILDWYIARTLLSTTAMSLGVLVGLSALIKFIEQMKSVGRGSYDMTVAAVYVFLSLPRE 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + + + N+EL+++ + G SR +I + AIL+ +F+ + Sbjct: 62 LEQFFPMATLIGGLIGMGILASNSELVVMQSAGQSRWNIIISAMKSAILMVLFVMVIGEW 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI 175 + P + K++ +A + + + L + D D ++ I + +TL+ + I Sbjct: 122 VAPVSETKAKEIRTQAISGGSL-FSSDRLVWAKDGDNFVSIGEVVDKDTLRDVSI 175 >gi|332704119|ref|ZP_08424207.1| permease YjgP/YjgQ family protein [Desulfovibrio africanus str. Walvis Bay] gi|332554268|gb|EGJ51312.1| permease YjgP/YjgQ family protein [Desulfovibrio africanus str. Walvis Bay] Length = 396 Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust. Identities = 48/214 (22%), Positives = 95/214 (44%), Gaps = 28/214 (13%) Query: 156 DLYIKISKYNPNN-TLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQ----AIILNDGEVHR 210 L I +Y+P N ++ IF+ DSR +T A+ G + D++ +LNDG ++R Sbjct: 163 GLTIFAEQYDPGNKEMRLIFVQDSRGDETSATIVAEKGRVVTDKERGRLQFLLNDGAIYR 222 Query: 211 KSPISKDISIMKFKSY--TLQTESANSSTIVLKANDQNLSFL----LNPNPNNPNYRPE- 263 + + +KF SY L ++ + + + +S + L +P+ R E Sbjct: 223 TA--KDQVHTLKFVSYLVNLDIWKTFNAEQLSETRPREMSIMNLRRLAADPDLAKKRDED 280 Query: 264 LLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFG---VFW 320 + E KR T + ++ GL ++ A V+Q ++ + ++ G V++ Sbjct: 281 YVRKVNVEIQKRYTLPVACLVLGLFALPFACSFQGVKQ-------YVGVLMALGMFIVYY 333 Query: 321 GFSYIIHKIEQNPYYIPILYLFL----FCISSIF 350 I + ++ + P + L+L F +S+IF Sbjct: 334 SLYSISISLGESGFLAPWIGLWLPNVIFFVSAIF 367 >gi|326574663|gb|EGE24599.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis 101P30B1] Length = 437 Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust. Identities = 42/227 (18%), Positives = 93/227 (40%), Gaps = 26/227 (11%) Query: 22 FIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMN 81 F+V I ++++ + + ++ +L ++ GY P L ++ P F + V + Sbjct: 76 FLVVILLGGRLIRYFGMAAEGGLNVGVLFRLIGYNFPYFLELILPLSFFIGLMLVFGRLY 135 Query: 82 RNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALT 141 + E+ +++ +G SR + + ++ L ++L + +P + + +A Sbjct: 136 TDHEMTVMNASGISRGRVARLLMPLVVVLMCIEGWVSMVAKPWGMERATNIWQEQSVAQV 195 Query: 142 FSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIV--------DSRDTQTHK---IYYA 189 F + F D ++ + + N L+ + I+ D + Q+H+ I +A Sbjct: 196 FDLIRPQEFIS-SGDYHLYVGEMGANREFLKDVIIIQMHTAEPSDIQSRQSHQRDSIIFA 254 Query: 190 QS--------GSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 +S G I LD L G + P S+ S + F+ Y + Sbjct: 255 KSATHVETGNGQIQLD-----LQQGRRYEVDPTSRQYSQIGFERYRM 296 >gi|262274978|ref|ZP_06052789.1| putative membrane protein [Grimontia hollisae CIP 101886] gi|262221541|gb|EEY72855.1| putative membrane protein [Grimontia hollisae CIP 101886] Length = 357 Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust. Identities = 52/265 (19%), Positives = 111/265 (41%), Gaps = 19/265 (7%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +LYI R I + + +V ++ +I+ ++++ V + ++ ++ +P + Sbjct: 3 KILDLYIGRTIIATTSLCLATLVGLSAIIKFVEQLRSVGEGSFTMMTAVQYVLLSMPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L ++ ++EL+++ G S++ + VL A+ L + + Sbjct: 63 EMFFPMAVLLGALIGLGTLASSSELVVMQAAGFSKLDIGLSVLKTAMPLMLVVLALGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + ++L A A+ + ++ + D +I I++ + +L G+ I DT Sbjct: 123 APDAQKAARELRAFAKSGGNVMSVRRGVWAKDGSD-FIYIARTDQQESLVGVNIWKFDDT 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEV-HRKSPIS-----------------KDISIMKF 223 QT K + LD+ + +L + V H P+ + +SI+ Sbjct: 182 QTLKAQVFAEQARYLDKDSWMLENVTVTHFDGPVKINETTEKQLAWKTTLTPEKLSIVTV 241 Query: 224 KSYTLQTESANSSTIVLKANDQNLS 248 K L S LKA++Q+ S Sbjct: 242 KPEELSLSGVYSYVDYLKASEQDAS 266 >gi|119773934|ref|YP_926674.1| hypothetical protein Sama_0797 [Shewanella amazonensis SB2B] gi|119766434|gb|ABL99004.1| conserved hypothetical protein [Shewanella amazonensis SB2B] Length = 352 Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust. Identities = 51/264 (19%), Positives = 105/264 (39%), Gaps = 17/264 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI R + + + L + ++ +I+ + ++ LV + ++ +LIP Sbjct: 1 MSILDWYIARVLISTSSLCLLVLTGLSGIIKWVDQLRLVGRGSYTMMDAGVYVLFLIPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + L M N+EL+++ +G SR+ + + A+ L + + Sbjct: 61 IEMFFPMAVLLGALIGLGMMAANSELVVMQASGQSRLQITVSAMKTAVPLMLLVMALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD--- 177 + P +L A + ++ + D DL++ I + + NTL I + + Sbjct: 121 VAPAAEQRANELKATMISGGSLIKSHRGIWAK-DGDLFVNIGEVSDINTLGNITLYEFDQ 179 Query: 178 ----------SRDTQTHKIYYAQSGS-IDLDRQAIILN--DGEVHRKSPISKDISIMKFK 224 R T K + Q S + +AI+ D E+ + S +S++ K Sbjct: 180 QERLNHVVNARRATFDGKAWQMQGVSKTHITEEAIVREDIDSELWQSSLTPDKLSVVSVK 239 Query: 225 SYTLQTESANSSTIVLKANDQNLS 248 +L + L+ N Q+ S Sbjct: 240 PESLSIQGLMGYLDYLRINSQDPS 263 >gi|118581150|ref|YP_902400.1| permease YjgP/YjgQ family protein [Pelobacter propionicus DSM 2379] gi|118503860|gb|ABL00343.1| permease YjgP/YjgQ family protein [Pelobacter propionicus DSM 2379] Length = 367 Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust. Identities = 44/232 (18%), Positives = 97/232 (41%), Gaps = 6/232 (2%) Query: 5 ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 E YI+R I ++ C ++ I ++ +N + S ++ + + L ++ Sbjct: 4 ERYIVREICAPLVVICTVLIMIFSGFSAVRFLNDAVNGLLSGGTVVALVSLKVLIALEVL 63 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P + L+ + + E+ ++ G S+ LI VLFLAILL++ + P Sbjct: 64 IPVTLYLAIVLALSRLYADGEITAMEAGGLSQKKLISAVLFLAILLALMVTGLSLHARPW 123 Query: 125 CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIV----DSR 179 + L + Q + +E F+ L +L K +P N + +++ + R Sbjct: 124 AYGKMYLLETRGQNEFDIAKVEAGRFYELSHNLVFFAEKLDPARNQARNVWVWEFGPEKR 183 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 + + + +G + ++AI+ +G + + + ++ F+ LQ E Sbjct: 184 RVTSARSAFQTNGPGE-GQKAIVFQEGSHYSLNLKTGTDHLVGFQENVLQLE 234 >gi|78188415|ref|YP_378753.1| hypothetical protein Cag_0437 [Chlorobium chlorochromatii CaD3] gi|78170614|gb|ABB27710.1| conserved hypothetical protein [Chlorobium chlorochromatii CaD3] Length = 443 Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust. Identities = 44/191 (23%), Positives = 82/191 (42%), Gaps = 12/191 (6%) Query: 53 SGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSI 112 S +++ LPM M + T+ +E+ + +G S ++ PV+ +++LLS Sbjct: 57 SAWMVSFALPMAVLVAVVMSFGTLTTT----SEMTVCRASGISLYRVMVPVIVVSLLLSF 112 Query: 113 FLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD--LYIKISKYNPNNTL 170 + N++ P+ K L A+ + L E F L D +Y++ S + L Sbjct: 113 TVERFNNVLLPQANYQAKSLMAEIARSKPAFGLTEQAFSTLVDGYSMYVRSSD-ERHGEL 171 Query: 171 QGIFIVDSRDTQTHKIYYAQSGSIDL--DRQAII--LNDGEVHR-KSPISKDISIMKFKS 225 +G+ I D + A G ++ D Q ++ L +G +H+ + P M F+ Sbjct: 172 RGVVIHDMTRPEYRTTITATRGRVEFTPDYQYLVMTLRNGAIHQLQQPEKSGYRSMNFER 231 Query: 226 YTLQTESANSS 236 Y ES+ S Sbjct: 232 YRFVFESSLSG 242 >gi|237811281|ref|YP_002895732.1| permease YjgP/YjgQ family protein [Burkholderia pseudomallei MSHR346] gi|254181440|ref|ZP_04888037.1| putative membrane protein [Burkholderia pseudomallei 1655] gi|184211978|gb|EDU09021.1| putative membrane protein [Burkholderia pseudomallei 1655] gi|237503123|gb|ACQ95441.1| permease YjgP/YjgQ family protein [Burkholderia pseudomallei MSHR346] Length = 365 Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust. Identities = 42/191 (21%), Positives = 80/191 (41%), Gaps = 14/191 (7%) Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLA----ILLSIFLFISENIIEPKCRSTIKQ 131 VLT +++E+++ +G S LIKP+ A IL++ F F+ P K Sbjct: 75 VLTRWYKDSEMVVWLASGVSLTRLIKPIGVFATPIVILIAFFAFVG----WPWSNQQSKL 130 Query: 132 LSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYNPNNT-LQGIFIVDSRDTQTHKIYYA 189 + A+ Q S L F + + I K +P+ +Q +F+ + + + + + Sbjct: 131 IKARFQQRDEVSLLAPGQFRESAANHRVFFIEKMSPDQAKVQNVFVTTTEQGKVN-VVVS 189 Query: 190 QSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 Q+G + + I+L +G + P + IM+F+ Y ++ +S + Sbjct: 190 QTGHTETMKNGDRFIVLENGRRYDGVPGQPNFKIMEFERYGVKIQSKQIVSQPTTTGTST 249 Query: 247 LSFLLNPNPNN 257 L NP N Sbjct: 250 PDLLRNPTNQN 260 >gi|167718522|ref|ZP_02401758.1| hypothetical protein BpseD_05837 [Burkholderia pseudomallei DM98] Length = 365 Score = 40.0 bits (92), Expect = 0.55, Method: Compositional matrix adjust. Identities = 42/191 (21%), Positives = 80/191 (41%), Gaps = 14/191 (7%) Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLA----ILLSIFLFISENIIEPKCRSTIKQ 131 VLT +++E+++ +G S LIKP+ A IL++ F F+ P K Sbjct: 75 VLTRWYKDSEMVVWLASGVSLTRLIKPIGVFATPIVILIAFFAFVG----WPWSNQQSKL 130 Query: 132 LSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYNPNNT-LQGIFIVDSRDTQTHKIYYA 189 + A+ Q S L F + + I K +P+ +Q +F+ + + + + + Sbjct: 131 IKARFQQRDEVSLLAPGQFRESAANHRVFFIEKMSPDQAKVQNVFVTTTEHGKVN-VVVS 189 Query: 190 QSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 Q+G + + I+L +G + P + IM+F+ Y ++ +S + Sbjct: 190 QTGHTETMKNGDRFIVLENGRRYDGVPGQPNFKIMEFERYGVKIQSKQIVSQPTTTGTST 249 Query: 247 LSFLLNPNPNN 257 L NP N Sbjct: 250 PDLLRNPTNQN 260 >gi|115525295|ref|YP_782206.1| permease YjgP/YjgQ [Rhodopseudomonas palustris BisA53] gi|115519242|gb|ABJ07226.1| permease YjgP/YjgQ family protein [Rhodopseudomonas palustris BisA53] Length = 361 Score = 40.0 bits (92), Expect = 0.56, Method: Compositional matrix adjust. Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 8/118 (6%) Query: 16 FLMSCLFIVFIAWVIQILQRINLVSSSTESLNILL--KISGYLIPTVLPMVTPFCFAMET 73 FL + +VF+ + I +L+R S ++ LL + S + +P +L + PFC + Sbjct: 22 FLGLFVLLVFVDY-IDLLRR-----SGGRAIPALLIAQTSMFRVPQLLERLMPFCILIGA 75 Query: 74 TNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQ 131 +++R EL++ G S + P L+ A+LL F + N + + KQ Sbjct: 76 MTCYLALSRRLELVVARAAGVSAWQFMAPALWSALLLGTFATMVFNPVSANLQERAKQ 133 >gi|124025509|ref|YP_001014625.1| putative permease [Prochlorococcus marinus str. NATL1A] gi|123960577|gb|ABM75360.1| possible permease [Prochlorococcus marinus str. NATL1A] Length = 395 Score = 40.0 bits (92), Expect = 0.57, Method: Compositional matrix adjust. Identities = 47/208 (22%), Positives = 86/208 (41%), Gaps = 18/208 (8%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 +P+ + + P + T S+N N+E+ + + G S +I P L L+I +S FI Sbjct: 79 LPSFIVISFPMAMLLSTLLAYGSLNDNSEIKALKSIGISVYRIILPGLILSIAMSYMTFI 138 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLE-ENLFFRLDDDLYIKISKYNPNNT------ 169 N I P + + A + L +F+ + E++ F ++ S Y N Sbjct: 139 FNNNIVPNTNKNAEIILANS-LGRSFANEQGEDIIFSKKGEILDPYSSYKKNGVTHLFYA 197 Query: 170 -------LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK 222 + + ++D ++ A+ G + D+ +G++ SP + K Sbjct: 198 WKFIDGQMLDVTVIDFSKLGFTQMLKAKKGIWNSDKNNWEFFEGDILTLSPDGSNTRT-K 256 Query: 223 FKS--YTLQTESANSSTIVLKANDQNLS 248 F S Y L TE N + + +ND NL Sbjct: 257 FLSFLYPLGTELTNIAQLPKDSNDMNLG 284 >gi|257468007|ref|ZP_05632103.1| hypothetical protein FulcA4_01647 [Fusobacterium ulcerans ATCC 49185] gi|317062293|ref|ZP_07926778.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185] gi|313687969|gb|EFS24804.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185] Length = 358 Score = 40.0 bits (92), Expect = 0.57, Method: Compositional matrix adjust. Identities = 38/169 (22%), Positives = 74/169 (43%), Gaps = 15/169 (8%) Query: 1 MKSFELYILRCIGRSFLMSC---LFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLI 57 MK E YIL + L FI I ++ +++ N++ ++I+ +S YL Sbjct: 1 MKIIEKYILEEVKMPILFGISLFTFIFLIDIIVAMME--NIIVKGISIIDIMRILSFYL- 57 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 P +L P + + R +E + + G ++KP+ LA ++F+F Sbjct: 58 PPILSQTIPMGIFLGVMLTFSKFTRTSEATAMSSIGMDLRGIVKPIFILACATTLFIFFL 117 Query: 118 ENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYN 165 + I P+ S ++ ++ K EN F+L + +I ++ +YN Sbjct: 118 QESIIPRSFSKLQYITTKIAY--------ENPVFQLKEKTFIDEVEEYN 158 >gi|225619709|ref|YP_002720966.1| permease YjgP/YjgQ [Brachyspira hyodysenteriae WA1] gi|225214528|gb|ACN83262.1| permease YjgP/YjgQ [Brachyspira hyodysenteriae WA1] Length = 417 Score = 40.0 bits (92), Expect = 0.60, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 85/185 (45%), Gaps = 6/185 (3%) Query: 1 MKSFELYI-LRCIGRSFLMSCLFIVFIAWVIQIL-QRINLVSSSTESLNILLKISGYLIP 58 MK YI L IG FL LF FI +VIQ+L + I L+ ++ L + L++ Y++P Sbjct: 1 MKKINKYIILETIG-PFLAGILFFTFI-FVIQLLPELIRLIVNNGAPLFMSLEVFVYMLP 58 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P M + ++ + E++++ G + + P++ L + IF Sbjct: 59 FNIAITIPMSILMASIIGYGRLSSDNEIIVMRALGFPHMRIYMPIIILGVFTFIFSLFFN 118 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKI-SKYNPNNTLQGIFIVD 177 N+I + + L + + + S L F D+ + I SKY + ++ + I D Sbjct: 119 NVIMSESNYRYRALISY-MVNIKPSIAVGKLEFSDIPDMGLSIGSKYADDTSMSNVVIYD 177 Query: 178 SRDTQ 182 DT+ Sbjct: 178 RSDTK 182 >gi|296114026|ref|YP_003627964.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis RH4] gi|295921720|gb|ADG62071.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis RH4] Length = 396 Score = 39.7 bits (91), Expect = 0.65, Method: Compositional matrix adjust. Identities = 42/227 (18%), Positives = 93/227 (40%), Gaps = 26/227 (11%) Query: 22 FIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMN 81 F+V I ++++ + + ++ +L ++ GY P L ++ P F + V + Sbjct: 35 FLVVILLGGRLIRYFGMAAEGGLNVGVLFRLIGYNFPYFLELILPLSFFIGLMLVFGRLY 94 Query: 82 RNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALT 141 + E+ +++ +G SR + + ++ L ++L + +P + + +A Sbjct: 95 TDHEMTVMNASGISRGRVARLLMPLVVVLMCIEGWVSMVAKPWGMERATNIWQEQSVAQV 154 Query: 142 FSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIV--------DSRDTQTHK---IYYA 189 F + F D ++ + + N L+ + I+ D + Q+H+ I +A Sbjct: 155 FDLIRPQEFIS-SGDYHLYVGEMGANREFLKDVIIIQMHTAEPSDIQSRQSHQRDSIIFA 213 Query: 190 QS--------GSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 +S G I LD L G + P S+ S + F+ Y + Sbjct: 214 KSATHVETGNGQIQLD-----LQQGRRYEVDPTSRQYSQIGFERYRM 255 >gi|94266928|ref|ZP_01290581.1| permease YjgP/YjgQ [delta proteobacterium MLMS-1] gi|93452380|gb|EAT02999.1| permease YjgP/YjgQ [delta proteobacterium MLMS-1] Length = 359 Score = 39.7 bits (91), Expect = 0.65, Method: Compositional matrix adjust. Identities = 44/236 (18%), Positives = 95/236 (40%), Gaps = 15/236 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRIN-----LVSSSTESLNILLKISGY 55 MK + Y++ GR+ ++ I ++ +R++ + + +LLKI Sbjct: 1 MKLLDRYLITSFGRNLATVLGGLLAIYLLVDFFERVDSFLDAGLGTGGAVRYLLLKI--- 57 Query: 56 LIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLF 115 P ++ + P + L +NR EL+ + G S +I+P+L A ++ Sbjct: 58 --PLIIEQLLPVALLLAGIITLGLLNRRHELMALQAAGLSTRRIIRPLLLAAFACTLLGM 115 Query: 116 ISENIIEPKCRSTIKQLSAKAQLALTFSYLEEN--LFFRLDDDLYIKISKYNPNNTLQGI 173 S + P S + +L + +E +++R + +Y + N L Sbjct: 116 ASSQWLLPPTMSELNRLWHQEVRQQENRGIERQGRIYYRGQEGIYSFRPAADSENRLADF 175 Query: 174 -FIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 ++ RD + ++ +A S D + +L +G++ K+ D + F+ L Sbjct: 176 SYLTWDRDYRLAQLIFATRAS--WDGRKWLLEEGQLKEKANGDDDFVVDYFERRQL 229 >gi|53718606|ref|YP_107592.1| putative permease [Burkholderia pseudomallei K96243] gi|53725611|ref|YP_102446.1| permease [Burkholderia mallei ATCC 23344] gi|67640815|ref|ZP_00439609.1| permease YjgP/YjgQ family protein [Burkholderia mallei GB8 horse 4] gi|76811087|ref|YP_332585.1| permease [Burkholderia pseudomallei 1710b] gi|121601060|ref|YP_993649.1| hypothetical protein BMASAVP1_A2340 [Burkholderia mallei SAVP1] gi|124383987|ref|YP_001028889.1| hypothetical protein BMA10229_A2945 [Burkholderia mallei NCTC 10229] gi|126450363|ref|YP_001081198.1| hypothetical protein BMA10247_1654 [Burkholderia mallei NCTC 10247] gi|126453581|ref|YP_001065301.1| hypothetical protein BURPS1106A_1021 [Burkholderia pseudomallei 1106a] gi|134281291|ref|ZP_01768000.1| putative membrane protein [Burkholderia pseudomallei 305] gi|167003639|ref|ZP_02269425.1| putative membrane protein [Burkholderia mallei PRL-20] gi|167737554|ref|ZP_02410328.1| hypothetical protein Bpse14_05785 [Burkholderia pseudomallei 14] gi|167814688|ref|ZP_02446368.1| hypothetical protein Bpse9_06062 [Burkholderia pseudomallei 91] gi|167823142|ref|ZP_02454613.1| hypothetical protein Bpseu9_05663 [Burkholderia pseudomallei 9] gi|167844706|ref|ZP_02470214.1| hypothetical protein BpseB_05398 [Burkholderia pseudomallei B7210] gi|167893241|ref|ZP_02480643.1| hypothetical protein Bpse7_05715 [Burkholderia pseudomallei 7894] gi|167901698|ref|ZP_02488903.1| hypothetical protein BpseN_05425 [Burkholderia pseudomallei NCTC 13177] gi|167909937|ref|ZP_02497028.1| hypothetical protein Bpse112_05556 [Burkholderia pseudomallei 112] gi|167917974|ref|ZP_02505065.1| hypothetical protein BpseBC_05423 [Burkholderia pseudomallei BCC215] gi|217419643|ref|ZP_03451149.1| putative membrane protein [Burkholderia pseudomallei 576] gi|226194506|ref|ZP_03790104.1| putative membrane protein [Burkholderia pseudomallei Pakistan 9] gi|242317338|ref|ZP_04816354.1| putative membrane protein [Burkholderia pseudomallei 1106b] gi|254177868|ref|ZP_04884523.1| putative membrane protein [Burkholderia mallei ATCC 10399] gi|254190839|ref|ZP_04897346.1| putative membrane protein [Burkholderia pseudomallei Pasteur 52237] gi|254196871|ref|ZP_04903295.1| putative membrane protein [Burkholderia pseudomallei S13] gi|254199348|ref|ZP_04905714.1| putative membrane protein [Burkholderia mallei FMH] gi|254205664|ref|ZP_04912016.1| putative membrane protein [Burkholderia mallei JHU] gi|254258333|ref|ZP_04949387.1| putative membrane protein [Burkholderia pseudomallei 1710a] gi|254357822|ref|ZP_04974095.1| putative membrane protein [Burkholderia mallei 2002721280] gi|52209020|emb|CAH34960.1| putative permease protein [Burkholderia pseudomallei K96243] gi|52429034|gb|AAU49627.1| permease, putative [Burkholderia mallei ATCC 23344] gi|76580540|gb|ABA50015.1| permease, putative [Burkholderia pseudomallei 1710b] gi|121229870|gb|ABM52388.1| putative membrane protein [Burkholderia mallei SAVP1] gi|124292007|gb|ABN01276.1| putative membrane protein [Burkholderia mallei NCTC 10229] gi|126227223|gb|ABN90763.1| putative membrane protein [Burkholderia pseudomallei 1106a] gi|126243233|gb|ABO06326.1| putative membrane protein [Burkholderia mallei NCTC 10247] gi|134247597|gb|EBA47682.1| putative membrane protein [Burkholderia pseudomallei 305] gi|147748944|gb|EDK56018.1| putative membrane protein [Burkholderia mallei FMH] gi|147753107|gb|EDK60172.1| putative membrane protein [Burkholderia mallei JHU] gi|148026949|gb|EDK84970.1| putative membrane protein [Burkholderia mallei 2002721280] gi|157938514|gb|EDO94184.1| putative membrane protein [Burkholderia pseudomallei Pasteur 52237] gi|160698907|gb|EDP88877.1| putative membrane protein [Burkholderia mallei ATCC 10399] gi|169653614|gb|EDS86307.1| putative membrane protein [Burkholderia pseudomallei S13] gi|217396947|gb|EEC36963.1| putative membrane protein [Burkholderia pseudomallei 576] gi|225933591|gb|EEH29580.1| putative membrane protein [Burkholderia pseudomallei Pakistan 9] gi|238521610|gb|EEP85060.1| permease YjgP/YjgQ family protein [Burkholderia mallei GB8 horse 4] gi|242140577|gb|EES26979.1| putative membrane protein [Burkholderia pseudomallei 1106b] gi|243060865|gb|EES43051.1| putative membrane protein [Burkholderia mallei PRL-20] gi|254217022|gb|EET06406.1| putative membrane protein [Burkholderia pseudomallei 1710a] Length = 365 Score = 39.7 bits (91), Expect = 0.65, Method: Compositional matrix adjust. Identities = 42/191 (21%), Positives = 80/191 (41%), Gaps = 14/191 (7%) Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLA----ILLSIFLFISENIIEPKCRSTIKQ 131 VLT +++E+++ +G S LIKP+ A IL++ F F+ P K Sbjct: 75 VLTRWYKDSEMVVWLASGVSLTRLIKPIGVFATPIVILIAFFAFVG----WPWSNQQSKL 130 Query: 132 LSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYNPNNT-LQGIFIVDSRDTQTHKIYYA 189 + A+ Q S L F + + I K +P+ +Q +F+ + + + + + Sbjct: 131 IKARFQQRDEVSLLAPGQFRESAANHRVFFIEKMSPDQAKVQNVFVTTTEHGKVN-VVVS 189 Query: 190 QSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 Q+G + + I+L +G + P + IM+F+ Y ++ +S + Sbjct: 190 QTGHTETMKNGDRFIVLENGRRYDGVPGQPNFKIMEFERYGVKIQSKQIVSQPTTTGTST 249 Query: 247 LSFLLNPNPNN 257 L NP N Sbjct: 250 PDLLRNPTNQN 260 >gi|312879634|ref|ZP_07739434.1| permease YjgP/YjgQ family protein [Aminomonas paucivorans DSM 12260] gi|310782925|gb|EFQ23323.1| permease YjgP/YjgQ family protein [Aminomonas paucivorans DSM 12260] Length = 337 Score = 39.7 bits (91), Expect = 0.67, Method: Compositional matrix adjust. Identities = 37/199 (18%), Positives = 91/199 (45%), Gaps = 9/199 (4%) Query: 37 NLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSR 96 +LV SL +++++ Y +P V+ + P + ++ N E++ + G + Sbjct: 14 DLVIQRGVSLGVVVRLFLYYLPGVVVLTIPMGSLLAALLGFGRLSANVEIVALKAAGVAF 73 Query: 97 ITLIKPVLFLAILLSIF-LFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD 155 +++PV++ ++L+S+ + ++E ++ R+ + L + + T +E +F + + Sbjct: 74 QRIVRPVIWASLLVSLGSMALNETLVPLAERAAVNLLRYEV-MQETPPLFKERIFLKEEK 132 Query: 156 DLYIK----ISKYNP-NNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHR 210 D ++K I++ P + + I + + + + +I A G + R + DG+V Sbjct: 133 DGHLKRVIYINRMRPRSGKMADILVQEFEEDRLSRIIAAPRG--EWVRGEWWIEDGKVFE 190 Query: 211 KSPISKDISIMKFKSYTLQ 229 K + F+ LQ Sbjct: 191 VDAQGKVRLLFTFRKQGLQ 209 >gi|312113657|ref|YP_004011253.1| permease YjgP/YjgQ family protein [Rhodomicrobium vannielii ATCC 17100] gi|311218786|gb|ADP70154.1| permease YjgP/YjgQ family protein [Rhodomicrobium vannielii ATCC 17100] Length = 363 Score = 39.7 bits (91), Expect = 0.68, Method: Compositional matrix adjust. Identities = 35/136 (25%), Positives = 63/136 (46%), Gaps = 12/136 (8%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINL--VSSSTESLNILLKISGYLIPT 59 K F + IL F ++ L I F+ +V ++L+ VS+ T +L LL+I P Sbjct: 13 KRFAITILGV----FFVTLLLIFFVDFV-EVLRSGARKDVSAGTLALITLLRI-----PI 62 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + PF + T S++R +EL I+ G S ++P L +AI +F N Sbjct: 63 FAELTLPFAILIGTIAAFLSLSRTSELTIMRAAGLSVWQFVQPALIVAIFFGVFAVTVYN 122 Query: 120 IIEPKCRSTIKQLSAK 135 + ++ +++ A+ Sbjct: 123 PVASAMKAKSEKIQAE 138 >gi|127511874|ref|YP_001093071.1| permease YjgP/YjgQ family protein [Shewanella loihica PV-4] gi|126637169|gb|ABO22812.1| permease YjgP/YjgQ family protein [Shewanella loihica PV-4] Length = 352 Score = 39.7 bits (91), Expect = 0.68, Method: Compositional matrix adjust. Identities = 37/180 (20%), Positives = 77/180 (42%), Gaps = 1/180 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +LYI R + + + L + ++ +I+ + +I LV T ++ +LIP Sbjct: 1 MRILDLYIARVLLSTSALCLLVLTGLSGIIKWVDQIRLVGRGTYTMVDAGIYVLFLIPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + + N+EL+++ + G SR + + A+ L + + Sbjct: 61 IEMFFPMAVLLGALIGMGMLASNSELVVMQSAGLSRFQITLSAMKTAVPLMLLVMALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P K+L A +L+ + + D DL++ I + N+L I + + D Sbjct: 121 GAPVAERHGKELQA-VKLSGGSLFKSSRGIWAKDGDLFVNIGEIEDINSLHNIVLYEFDD 179 >gi|242008257|ref|XP_002424923.1| sodium antiporter, putative [Pediculus humanus corporis] gi|212508537|gb|EEB12185.1| sodium antiporter, putative [Pediculus humanus corporis] Length = 670 Score = 39.7 bits (91), Expect = 0.71, Method: Compositional matrix adjust. Identities = 16/46 (34%), Positives = 26/46 (56%) Query: 307 PIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 P+ I + FG+ WGF ++ +P+ IP+ L LFC +I +L Sbjct: 376 PVSIIMGFGFGILWGFLSKFVPVKDDPFVIPLRVLLLFCGGTIAVL 421 >gi|317477113|ref|ZP_07936354.1| hypothetical protein HMPREF1016_03338 [Bacteroides eggerthii 1_2_48FAA] gi|316906656|gb|EFV28369.1| hypothetical protein HMPREF1016_03338 [Bacteroides eggerthii 1_2_48FAA] Length = 635 Score = 39.7 bits (91), Expect = 0.72, Method: Compositional matrix adjust. Identities = 44/212 (20%), Positives = 95/212 (44%), Gaps = 12/212 (5%) Query: 1 MKSFELYILR--CIGRSFLMSCLFIVFIAWVIQILQR-INLVSSSTESLNILLKISGYLI 57 +K +++IL+ C+ M FI +++Q L + ++ + +N+L + Y Sbjct: 4 IKKLDIFILKSFCL---LFMGTFFICLFIFMMQFLWKYVDEMVGKGLEMNVLAQFFFYSA 60 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 T++P P + + ELL + G S + +++P++F L+ F Sbjct: 61 LTLVPASLPLAILLAALITFGNFGERFELLAMKAAGISLLKIMRPLIFFISLICCVSFYF 120 Query: 118 ENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD--DLYIKISKYNPNNTLQGIFI 175 +N+I PK ++ + L + + E +F+ D +LY+K K L + I Sbjct: 121 QNVIGPKAQTKLWTLLVSMKQKSPEVDIPEGVFYDEIDGYNLYVK-HKNRETGMLYDVLI 179 Query: 176 VD-SRDTQTHKIYYAQSGSIDL--DRQAIILN 204 + + + +I + SG +++ D+Q + L+ Sbjct: 180 YNFEKGFENAQIIKSDSGRLEMTADKQHLYLH 211 >gi|239948137|ref|ZP_04699890.1| putative permease [Rickettsia endosymbiont of Ixodes scapularis] gi|239922413|gb|EER22437.1| putative permease [Rickettsia endosymbiont of Ixodes scapularis] Length = 233 Score = 39.7 bits (91), Expect = 0.73, Method: Compositional matrix adjust. Identities = 23/94 (24%), Positives = 52/94 (55%), Gaps = 3/94 (3%) Query: 143 SYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDL-DRQAI 201 S +EE F ++ D+ + I K + N + G+ I D+R+ + +A SG++++ D I Sbjct: 15 SMIEEKTFNKVTKDITVFIDKKSAGNIMNGVIIFDNRNADNPSVVFAGSGTLNIYDNSPI 74 Query: 202 I-LNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 LN G + ++ ++ +++ + F S ++ ++ N Sbjct: 75 FELNKG-IRQEYDVNGNLTQLTFDSLMIKLQNDN 107 >gi|157413956|ref|YP_001484822.1| putative permease [Prochlorococcus marinus str. MIT 9215] gi|157388531|gb|ABV51236.1| Permease [Prochlorococcus marinus str. MIT 9215] Length = 403 Score = 39.7 bits (91), Expect = 0.77, Method: Compositional matrix adjust. Identities = 41/196 (20%), Positives = 85/196 (43%), Gaps = 20/196 (10%) Query: 50 LKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAIL 109 LK+ + +P+ L + P + T ++ N+ELL + + G +I P + L+I Sbjct: 75 LKVLFFSLPSFLVLSFPMAVLLSTLLAYGKLSSNSELLALKSLGIKTSRIIAPAIALSIF 134 Query: 110 LSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLE--ENLFF-----RLDDD------ 156 ++ F + + PK + + + + +A + +FS E EN+ F R++ Sbjct: 135 MTGLTFYFNDNLVPKS-NKLAEATLRAGIGSSFSEEEGKENIMFSRYGSRINASTKKPTK 193 Query: 157 -----LYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRK 211 +I +++ N + + ++D +I A S D + I + G + Sbjct: 194 NYSQLTHIFYAQWYKNKLMGNVTLLDFSREDLQQILKADSARFDKKNSSWIFSKGSIVSI 253 Query: 212 SPISKDISIMKFKSYT 227 +P + +I +FK YT Sbjct: 254 TPSGQTTNI-QFKEYT 268 >gi|197105169|ref|YP_002130546.1| hypothetical protein PHZ_c1706 [Phenylobacterium zucineum HLK1] gi|196478589|gb|ACG78117.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1] Length = 367 Score = 39.7 bits (91), Expect = 0.79, Method: Compositional matrix adjust. Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 6/92 (6%) Query: 21 LFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSM 80 L I F+ Q+ R ++ +S +L +L P+++ ++ PFCF + Sbjct: 31 LLIQFVELSSQVGTRADVGASGIFALTLLRA------PSLIQILLPFCFLFGGIGAFVGL 84 Query: 81 NRNTELLIIDNTGTSRITLIKPVLFLAILLSI 112 NR +EL+ + G S I P LA +L + Sbjct: 85 NRKSELVAMRAAGVSAWRFILPSAALAAILGV 116 >gi|253583477|ref|ZP_04860675.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725] gi|251834049|gb|EES62612.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725] Length = 358 Score = 39.7 bits (91), Expect = 0.83, Method: Compositional matrix adjust. Identities = 37/169 (21%), Positives = 75/169 (44%), Gaps = 15/169 (8%) Query: 1 MKSFELYILRCIGRSFLMSC---LFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLI 57 MK E YIL + L FI I ++ +++ N++ ++I+ +S YL Sbjct: 1 MKIIEKYILEEVKMPILFGISLFTFIFLIDIIVAMME--NIIVKGISIIDIMRILSFYL- 57 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 P +L P + + R +E + + G ++KP+ LA + ++F+F Sbjct: 58 PPILSQTIPMGIFLGVMLTFSKFTRTSESTAMSSIGMDLREIVKPIFILACITTLFIFFL 117 Query: 118 ENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYN 165 + I P+ + ++ ++ K EN F+L + +I ++ +YN Sbjct: 118 QESIIPRSFTKLQYITTKIAY--------ENPVFQLKEKTFIDEVDEYN 158 >gi|293393093|ref|ZP_06637408.1| inner membrane protein YjgP [Serratia odorifera DSM 4582] gi|291424239|gb|EFE97453.1| inner membrane protein YjgP [Serratia odorifera DSM 4582] Length = 393 Score = 39.3 bits (90), Expect = 0.85, Method: Compositional matrix adjust. Identities = 47/236 (19%), Positives = 92/236 (38%), Gaps = 15/236 (6%) Query: 47 NILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFL 106 N++L + +P + ++ P + L + +E+ ++ G + TLI + L Sbjct: 75 NLVLSLLALGVPKMAQLILPLSLFLGLLMTLGRLYTESEITVMHACGLGKRTLIIAAMVL 134 Query: 107 AILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP 166 A+L S+ + I P S ++ A+A+ + + L E F D + Sbjct: 135 ALLTSLVAAANVFWIGPWASSHQDEVIAEAKANPSIAGLAEGQFQPSQDGNAVLFVGNVK 194 Query: 167 NNTLQGIFIVDSR--DTQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIM 221 NT +F+ R Q + A+ G I+ Q + L+ G + + +D I Sbjct: 195 GNTFNNVFLAQLRPNGNQRPSVVVAEHGQINQMKDGSQVVTLDKGTRFEGTALLRDFRIT 254 Query: 222 KFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLT 277 F Y + + + + + +S L ++ + R+EFH RLT Sbjct: 255 DFSDY--KAVVGHRAVAMDNTQAEQMSMLTLWQSDD--------QEARAEFHWRLT 300 >gi|158521443|ref|YP_001529313.1| permease YjgP/YjgQ family protein [Desulfococcus oleovorans Hxd3] gi|158510269|gb|ABW67236.1| permease YjgP/YjgQ family protein [Desulfococcus oleovorans Hxd3] Length = 359 Score = 39.3 bits (90), Expect = 0.88, Method: Compositional matrix adjust. Identities = 25/114 (21%), Positives = 46/114 (40%) Query: 55 YLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFL 114 + IP ++ P + + V MNR E+ + ++G +L KP + + + L Sbjct: 55 FKIPLIVVQTAPVGVLIASLVVFGLMNRRNEVTALKSSGIGPASLFKPAAVVGVGCCVLL 114 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN 168 I I+ P+ S + + T S ++N + DD + I Y P Sbjct: 115 LIVSEIVVPRTISRANYIWLQQVRQKTSSVDQKNNIWLKDDRTIVHIRHYQPRE 168 >gi|167618242|ref|ZP_02386873.1| permease, putative [Burkholderia thailandensis Bt4] Length = 365 Score = 39.3 bits (90), Expect = 0.90, Method: Compositional matrix adjust. Identities = 41/191 (21%), Positives = 80/191 (41%), Gaps = 14/191 (7%) Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLA----ILLSIFLFISENIIEPKCRSTIKQ 131 VLT +++E+++ +G S LIKP+ A IL++ F F+ P K Sbjct: 75 VLTRWYKDSEMVVWLASGVSLTRLIKPIGVFATPIVILIAFFAFVG----WPWSNQQSKL 130 Query: 132 LSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYNPNNT-LQGIFIVDSRDTQTHKIYYA 189 + A+ Q S L F + + I K +P+ +Q +F+ + + + + + Sbjct: 131 IKARFQQRDEVSLLAPGQFRESAANHRVFFIEKMSPDQAKVQNVFVTTTEHGKVN-VVVS 189 Query: 190 QSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 Q+G + + I+L +G + P + IM+F+ Y ++ ++ + Sbjct: 190 QTGHTETMKNGDRFIVLENGRRYDGVPGQPNFKIMEFERYGVKIQNKQVVSQPTTTGTST 249 Query: 247 LSFLLNPNPNN 257 L NP N Sbjct: 250 PDLLRNPTNQN 260 >gi|307728896|ref|YP_003906120.1| permease YjgP/YjgQ family protein [Burkholderia sp. CCGE1003] gi|307583431|gb|ADN56829.1| permease YjgP/YjgQ family protein [Burkholderia sp. CCGE1003] Length = 365 Score = 39.3 bits (90), Expect = 0.90, Method: Compositional matrix adjust. Identities = 36/166 (21%), Positives = 75/166 (45%), Gaps = 14/166 (8%) Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLA----ILLSIFLFISENIIEPKCRSTIKQ 131 VLT +++E+++ ++G S IKP+ A IL+ F+F+ P K Sbjct: 75 VLTRWYKDSEMVVWLSSGVSLTQFIKPIGMFATPIIILIMFFVFVGW----PWSNQQSKL 130 Query: 132 LSAKAQLALTFSYLEENLFFRLDDDLYIK-ISKYNPNNT-LQGIFIVDSRDTQTHKIYYA 189 + A+ Q S L F + I K +P+ ++ +F+ + + + + + + Sbjct: 131 IRARFQQRDEVSLLAPGQFRESAASHRVFFIEKMSPDQGHVENVFVTSTENGKLN-VVVS 189 Query: 190 QSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 ++G + + ++L +G + P D IM+F+ Y ++ ES Sbjct: 190 KNGHTETHKNGDRFVVLENGRRYDGEPGHPDFRIMEFERYGVRIES 235 >gi|227821475|ref|YP_002825445.1| permease YjgP/YjgQ family protein [Sinorhizobium fredii NGR234] gi|227340474|gb|ACP24692.1| permease YjgP/YjgQ family protein [Sinorhizobium fredii NGR234] Length = 360 Score = 39.3 bits (90), Expect = 0.90, Method: Compositional matrix adjust. Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 2/120 (1%) Query: 16 FLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTN 75 FL+ ++FI ++ R++ + T S +L+ + + IPT+L PF Sbjct: 21 FLVGIFALIFIIDFSELASRMSALPHYTVSGALLM--TTFRIPTILQQTVPFVALFSAMA 78 Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAK 135 L S+NR EL++ G S ++P + A L+ + ++ N + + L A+ Sbjct: 79 ALISLNRRYELVVTRAAGISVWQFLRPFVLGAFLVGVLAVVALNPLAAWGTKRAEALEAE 138 >gi|154253776|ref|YP_001414600.1| permease YjgP/YjgQ family protein [Parvibaculum lavamentivorans DS-1] gi|154157726|gb|ABS64943.1| permease YjgP/YjgQ family protein [Parvibaculum lavamentivorans DS-1] Length = 363 Score = 39.3 bits (90), Expect = 0.93, Method: Compositional matrix adjust. Identities = 32/132 (24%), Positives = 59/132 (44%), Gaps = 7/132 (5%) Query: 10 RCIGRSFLMSCL--FIVFIAWVIQILQRINLVSSSTE----SLNILLKISGYLIPTVLPM 63 R +GR FL L F VFI +I +++ + L+ S + + +++ I+ +P + Sbjct: 9 RYLGRQFLGVVLLTFGVFIV-LIFMIELVELLRRSADKPDVTFGLVVTIALMEVPRIGAQ 67 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 PF ++RN EL++ G S I P L +A ++ F+ N + Sbjct: 68 TLPFAVLFGGMAAFLRLSRNNELVVARAAGVSVWQFIAPALAVAFVIGAFVTTVFNPVSA 127 Query: 124 KCRSTIKQLSAK 135 + +QL +K Sbjct: 128 TLTTRAEQLESK 139 >gi|123969132|ref|YP_001009990.1| putative permease [Prochlorococcus marinus str. AS9601] gi|123199242|gb|ABM70883.1| possible permease [Prochlorococcus marinus str. AS9601] Length = 401 Score = 39.3 bits (90), Expect = 0.98, Method: Compositional matrix adjust. Identities = 36/177 (20%), Positives = 79/177 (44%), Gaps = 19/177 (10%) Query: 50 LKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAIL 109 LK+ + +P+ L + P + T ++ N+ELL + + G +I P + L+I Sbjct: 73 LKVLFFSLPSFLVLSFPMAVLLSTLLAYGKLSSNSELLALKSLGIKTSRIISPAIALSIF 132 Query: 110 LSIFLFISENIIEPKCRSTIKQLSAKAQLALTFS--YLEENLFF-----RLDDD------ 156 ++ F + + PK + + + + +A + +FS +EN+ F R++ + Sbjct: 133 MTGLTFYFNDNLVPKS-NKLAETTLRAGIGSSFSEEKGKENIMFSRYGSRINSETKKPTK 191 Query: 157 -----LYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEV 208 +I S++ N ++ + ++D +I A SG D + I ++G + Sbjct: 192 NNSKLTHIFYSQWYENKIMKNVTVLDFSREDFQQILKANSGRFDKKSSSWIFSNGSI 248 >gi|301058944|ref|ZP_07199913.1| permease, YjgP/YjgQ family [delta proteobacterium NaphS2] gi|300446940|gb|EFK10736.1| permease, YjgP/YjgQ family [delta proteobacterium NaphS2] Length = 358 Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust. Identities = 63/299 (21%), Positives = 121/299 (40%), Gaps = 36/299 (12%) Query: 41 SSTESLNILLKIS---GYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRI 97 ST L +LL+I+ L+PT L + F N E+ + G S + Sbjct: 45 GSTVILLVLLRIAISLEVLLPTTLYLSVMIAFG--------RFYMNAEMTGMSACGISMV 96 Query: 98 TLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD- 156 ++KPV+ LA+ + + I P + +L A++ + ++ F+ ++D Sbjct: 97 RVLKPVMLLAVTAGMIVACFSLYIRPWAWNQFFELKTGAKVDFDITRMKGGNFYEIEDGE 156 Query: 157 --LYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLD----RQAIILNDGEVHR 210 L+ + + L +F+ R + +I YA+S + ++ +G ++ Sbjct: 157 RVLFADKVDHGKHRALH-VFMQIKRHGEL-EIVYAESATQRFRNTTPEPVLVFQNGRLYT 214 Query: 211 KSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRS 270 S K I++F++ + S N + KA + L + + PE L + Sbjct: 215 FSETEKTWKILQFRNLEMSLTSNNVEPLKQKAKAFSTEQLWHSD------HPEAL----A 264 Query: 271 EFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH-PIFISLSISFGVFWGFSYIIHK 328 E RLT ++ L+ + + R+ RQ K P+ I + F V++ S I K Sbjct: 265 ELQWRLTAPFSTILLALLGVPLS--RSFPRQGKYTKVPLGI---LVFAVYYNLSAITKK 318 >gi|300973447|ref|ZP_07172203.1| conserved hypothetical protein [Escherichia coli MS 45-1] gi|301048206|ref|ZP_07195242.1| conserved hypothetical protein [Escherichia coli MS 185-1] gi|300299964|gb|EFJ56349.1| conserved hypothetical protein [Escherichia coli MS 185-1] gi|300410789|gb|EFJ94327.1| conserved hypothetical protein [Escherichia coli MS 45-1] gi|315291259|gb|EFU50619.1| conserved hypothetical protein [Escherichia coli MS 153-1] Length = 359 Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 94/227 (41%), Gaps = 27/227 (11%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I +TG S RI L+ A++ I Sbjct: 57 LPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALV------ALVAGILW 110 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEE------NLFFRLDDDLYIKISKYNPNN 168 +S I+ S ++Q Q+ T + L E N+ + + ++ + N Sbjct: 111 TVSLGAIDEWGASPLQQ--QALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQG 168 Query: 169 TLQGIFIVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK----- 222 G+ I RD + + Y YA+S +I+ D+ I+ G H+K K+ Sbjct: 169 QPVGVEIFHYRDDLSLESYIYARSATIEDDKTWIL--HGVNHKKWLNGKETQETSDYLAW 226 Query: 223 ---FKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLE 266 F S L+ S +T ++ + + +L + YR L E Sbjct: 227 QSTFTSMNLEELSMPGNTFSVRQLNHYIHYLQETGQPSSEYRLALWE 273 >gi|255038424|ref|YP_003089045.1| permease YjgP/YjgQ family protein [Dyadobacter fermentans DSM 18053] gi|254951180|gb|ACT95880.1| permease YjgP/YjgQ family protein [Dyadobacter fermentans DSM 18053] Length = 360 Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust. Identities = 38/189 (20%), Positives = 87/189 (46%), Gaps = 11/189 (5%) Query: 10 RCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-------ILLKISGYLIPTVLP 62 R + ++FL++ +F+ F+ ++ I+ I+ + L+ I++ LIP + Sbjct: 8 RYLIKNFLITYVFVAFV--IVLIICMIDYTEKVDDFLDKKAPLREIIIDYYLNLIPYWIN 65 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++P + T + + TE++ + ++G S +++P + A++L I FI + Sbjct: 66 YISPLMVFIATVFFTSRIAARTEIIAMLSSGISFGRMLRPYMAGAVVLGILTFIQVGWVL 125 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS-RDT 181 PK + I+ K + F + N+ + D+Y + YN F +++ + T Sbjct: 126 PKA-NKIRNSFEKTYVKNEFYFSGHNVHITIAPDVYAYLESYNTTTQTGNKFTMETIKGT 184 Query: 182 QTHKIYYAQ 190 + + +YA Sbjct: 185 KLLQKFYAD 193 >gi|254468723|ref|ZP_05082129.1| permease YjgP/YjgQ [beta proteobacterium KB13] gi|207087533|gb|EDZ64816.1| permease YjgP/YjgQ [beta proteobacterium KB13] Length = 355 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 57/306 (18%), Positives = 127/306 (41%), Gaps = 23/306 (7%) Query: 23 IVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNR 82 +VF+ LQ I ++S L+ ++ +P L + P + + ++ Sbjct: 22 LVFLFAFFDFLQEIGNLNSGKYDLSKIIVFITLSMPGHLYEIIPLSCLIGAMFTVGQLSG 81 Query: 83 NTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTF 142 N+EL+++ +G S + + ++ +++ + F+ N+I P +Q+ + Sbjct: 82 NSELVVMRTSGMSILQIASSLIIVSLFFGVLTFMVGNLITPVSEKNAQQIKISSTDGSVT 141 Query: 143 SYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SRDTQTHKIYYAQSG-------SI 194 + + ++ + D + ++ I P+ +L+ I I + D I A+ G + Sbjct: 142 TDFKSGVWMK-DGNNFVNIENVLPDASLRNIHIYEFDNDFSLRSIVDAEKGRYENGIWEL 200 Query: 195 DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPN 254 + +Q+ IL++G + P S++K E N ++L + D+ F LN Sbjct: 201 EKIKQSFILDEGFDVKTLPSGTWKSMIK-------PEMMN---VLLISPDRMSIFDLNDF 250 Query: 255 PNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSI 314 N + Y F +++ Q + P+I I+ A ++R + + L I Sbjct: 251 INYLKKNNQKTSRYEVSFWEKIIQPVMPIIM----ILFAVPFGFFQERSGGKYLKMFLGI 306 Query: 315 SFGVFW 320 FG+ + Sbjct: 307 IFGIIY 312 >gi|255533443|ref|YP_003093815.1| permease YjgP/YjgQ family protein [Pedobacter heparinus DSM 2366] gi|255346427|gb|ACU05753.1| permease YjgP/YjgQ family protein [Pedobacter heparinus DSM 2366] Length = 480 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 45/216 (20%), Positives = 92/216 (42%), Gaps = 4/216 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK L +++ R F ++ ++FI ++ + + ++ + ++L++ Y Sbjct: 1 MKKIHLLLVKAFIRPFFVTFFIVMFILLMLFLFKYVDDLIGKGFEWYVILELMYYASAAN 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + ++ N EL+ I + G S + P+L L I L+I F+ Sbjct: 61 VSMALPLSILLSSIMTFGTLGENYELVAIKSAGVSLQKAMMPLLVLIIFLAISSFLFSEY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVD-S 178 + PK L + ++E +F I++ K + +L + I D + Sbjct: 121 MLPKANLKFGSLLWDIRNKKLSFLIKEGVFNNSIPGYSIRVDKKGSDGISLHNVMIYDHT 180 Query: 179 RDTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKS 212 + KI A+SG S + D + L+DG + +S Sbjct: 181 SNNGIAKIIIAKSGKMSKNDDYLLLTLHDGVRYEES 216 >gi|16125010|ref|NP_419574.1| hypothetical protein CC_0757 [Caulobacter crescentus CB15] gi|221233731|ref|YP_002516167.1| hypothetical protein CCNA_00794 [Caulobacter crescentus NA1000] gi|13421992|gb|AAK22742.1| conserved hypothetical protein [Caulobacter crescentus CB15] gi|220962903|gb|ACL94259.1| conserved membrane spanning protein [Caulobacter crescentus NA1000] Length = 397 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 36/161 (22%), Positives = 72/161 (44%), Gaps = 3/161 (1%) Query: 18 MSCLFI-VFIAWVIQILQR-INLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTN 75 MS + I +A++++ L R +L+S +TE L L ++ L P + + P F + Sbjct: 19 MSAVLISTMVAFLMERLMRSFDLLSQTTEGLRYLAELLVNLTPHYVGLTLPGGFFIGLFV 78 Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAK 135 V+ +N+++E+ I +GTS P + + +LL + I ++P R + Sbjct: 79 VVNGLNKSSEIDAILASGTSLTRFTAPFVAMGVLLMVLSVILFGFVQPYSRYAYHAVLHA 138 Query: 136 AQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFI 175 A+ A + D ++ + + + LQ +FI Sbjct: 139 AENAGWNGDVRPKALLSAGSDFFLTADRTDASGRYLQQVFI 179 >gi|94263394|ref|ZP_01287208.1| permease YjgP/YjgQ [delta proteobacterium MLMS-1] gi|93456230|gb|EAT06364.1| permease YjgP/YjgQ [delta proteobacterium MLMS-1] Length = 359 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 43/236 (18%), Positives = 95/236 (40%), Gaps = 15/236 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRIN-----LVSSSTESLNILLKISGY 55 MK + Y++ GR+ ++ I ++ +R++ + + +LLKI Sbjct: 1 MKLLDRYLITSFGRNLATVLGGLLAIYLLVDFFERVDNFLDAGLGTGGAVRYLLLKI--- 57 Query: 56 LIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLF 115 P ++ + P + L +NR EL+ + G S +I+P+L A ++ Sbjct: 58 --PLIIEQLLPVALLLAGIITLGLLNRRHELMALQAAGLSTRRIIRPLLLAAFACTLLGM 115 Query: 116 ISENIIEPKCRSTIKQLSAKAQLALTFSYLEEN--LFFRLDDDLYIKISKYNPNNTLQGI 173 S + P S + +L + +E +++R + +Y + N L Sbjct: 116 ASSQWLLPPTMSELNRLWHQEVRQQENRGIERQGRIYYRGQEGIYSFRPAADSENRLADF 175 Query: 174 -FIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 ++ RD + ++ +A + D + +L +G++ K+ D + F+ L Sbjct: 176 SYLTWDRDYRLAQLIFAARAT--WDGRKWLLEEGQLKEKANGDDDFVVDYFERRQL 229 >gi|312884631|ref|ZP_07744334.1| permease [Vibrio caribbenthicus ATCC BAA-2122] gi|309367723|gb|EFP95272.1| permease [Vibrio caribbenthicus ATCC BAA-2122] Length = 367 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 46/230 (20%), Positives = 95/230 (41%), Gaps = 9/230 (3%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQR-INLVSSSTESLNILLKISGYL---IPTVL 61 + I+R + R L S I FI +++ + Q+ I +++ +T+ ++ Y+ +P++ Sbjct: 1 MIIVRYLIRETLKSQFAIFFILFLVFLSQKLIRVLADATDGDIPASLVANYVALSMPSMG 60 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 ++ P + + +E+ +++ TG LIK L+LAI+ + + Sbjct: 61 LIMLPLSLFLGILLTFGRLYAESEITVMNATGIGNKFLIKAALYLAIITGLLAAANAFFF 120 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD--SR 179 P ++ + L +A L++ F D + LQ +F+ R Sbjct: 121 APYSQNQLVHLQEEAAAENNVELLQKGHFQPSPDGSSVVFIDDIDKKKLQNVFVAQLRPR 180 Query: 180 DTQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSY 226 D+ + ++Q G + RQ I + DG + P D + F Y Sbjct: 181 DSILPSVSFSQYGEVKELSDGRQVIRMYDGTRYEGIPTRLDYMVTNFDQY 230 >gi|167646492|ref|YP_001684155.1| permease YjgP/YjgQ family protein [Caulobacter sp. K31] gi|167348922|gb|ABZ71657.1| permease YjgP/YjgQ family protein [Caulobacter sp. K31] Length = 378 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 33/164 (20%), Positives = 65/164 (39%), Gaps = 4/164 (2%) Query: 33 LQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNT 92 L +++ +S + LKI +P +L ++ P + L ++ E+++ Sbjct: 33 LSEFDVLIEQRQSAMVFLKIIALALPQLLSVILPIALFVAALVALNRLHTEQEIVVCFAG 92 Query: 93 GTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQ--LSAKAQLALTFSYLEENLF 150 G SR +I P + LA+L ++ + P I++ K+ LA T + F Sbjct: 93 GMSRWRVISPAMRLAVLATLISLAMSLWVAPWSSRAIRETFFDMKSDLASTL--VRPGEF 150 Query: 151 FRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSI 194 L + + + + +FI + Y A+SG I Sbjct: 151 TEPGPGLTVYAQVIDRDQIIHNVFIHQEKPNGAAVTYTARSGVI 194 >gi|258544322|ref|ZP_05704556.1| membrane protein [Cardiobacterium hominis ATCC 15826] gi|258520402|gb|EEV89261.1| membrane protein [Cardiobacterium hominis ATCC 15826] Length = 350 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 35/170 (20%), Positives = 79/170 (46%), Gaps = 1/170 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y+LR I + L++ F++ + +++QI + + +L ILL ++P Sbjct: 1 MTRFDRYLLRTILATSLIALAFLLAVDYIVQISVDADDLGQGNYTLAILLLQLLLVLPEK 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + TP + T L + E+ ++ G SR+ L + + A+++ + ++ Sbjct: 61 LLLYTPAAVLIGTIMGLGQLAAQNEIAVVRAAGISRLRLARAGIAFALIVGVLNIVNGET 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTL 170 + P+ + L +A + E+ ++ + + +I I NP+ +L Sbjct: 121 LAPQLADRSRLLRNQALGQSSDPGREQGIWLK-QQNTHIHIGALNPDGSL 169 >gi|320195129|gb|EFW69758.1| Permease Ygh-P2, YjgP/YjgQ family [Escherichia coli WV_060327] Length = 359 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 41/159 (25%), Positives = 73/159 (45%), Gaps = 9/159 (5%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I +TG S RI L+ L IL ++ L Sbjct: 57 LPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALV--ALVAGILWTVSL 114 Query: 115 -FISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI 173 I E + P + ++ S L + L+ R ++ ++ + N G+ Sbjct: 115 GAIDEWVASPLQQQALQIKSTATALGEDNDIIGNMLWARRGNE-FVTVKSLNEQGQPVGV 173 Query: 174 FIVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRK 211 I RD + + Y YA+S +I+ D+ I+ G H+K Sbjct: 174 EIFHYRDDLSLESYIYARSATIEDDKTWIL--HGVNHKK 210 >gi|82701536|ref|YP_411102.1| permease YjgP/YjgQ [Nitrosospira multiformis ATCC 25196] gi|82409601|gb|ABB73710.1| permease YjgP/YjgQ [Nitrosospira multiformis ATCC 25196] Length = 358 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 58/303 (19%), Positives = 129/303 (42%), Gaps = 28/303 (9%) Query: 38 LVSSSTESLNILLKISGYLIPTV--LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS 95 L + T+SL ++ + + T+ L ++ P + L ++R+ E++++ + G S Sbjct: 36 LAGAVTDSLGLIPVLRLVFLKTLIALEVLMPIALYVAVIMGLGRLHRDQEIVVLRSAGVS 95 Query: 96 RITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD 155 +I VL +AI + + + P L+A+A+ L F+ + Sbjct: 96 EHRIIYAVLIVAIPMGLISGLFSIFARPWAYEESYLLNAQAEAELNTDRFRAGRFYGSEK 155 Query: 156 D---LYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDL---DRQAIILNDGEVH 209 +Y++ +K + + +F ++ + I ++ +L R I L DG ++ Sbjct: 156 KGRVIYVQ-AKDSSGKQMGEVFHYLNKHDSSEIILAKKAHQPELVFGQRPQIHLLDGSIY 214 Query: 210 RKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYR 269 R S K ++++F+ T+S N + KA + + + P + Sbjct: 215 RLSHTGKGDTVVQFEKLVYFTDSGNVTDYRRKAAS-TAALMQSDQPRDT----------- 262 Query: 270 SEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI 329 +E RL++ L ++ LI++ + RA RQ K +++ ++ F ++ YI+ + Sbjct: 263 AELQWRLSRPLATILLALIAVPFS--RASPRQTKGDKTYYLA-ALVFAIY----YILSGL 315 Query: 330 EQN 332 Q Sbjct: 316 AQT 318 >gi|193062018|ref|ZP_03043114.1| putative permease, YjgP/YjgQ family [Escherichia coli E22] gi|300824069|ref|ZP_07104190.1| conserved hypothetical protein [Escherichia coli MS 119-7] gi|331669796|ref|ZP_08370641.1| putative permease [Escherichia coli TA271] gi|192932238|gb|EDV84836.1| putative permease, YjgP/YjgQ family [Escherichia coli E22] gi|300523459|gb|EFK44528.1| conserved hypothetical protein [Escherichia coli MS 119-7] gi|331062709|gb|EGI34623.1| putative permease [Escherichia coli TA271] Length = 359 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 98/227 (43%), Gaps = 27/227 (11%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I +TG S RI L+ A++ I Sbjct: 57 LPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALV------ALVAGILW 110 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEE------NLFFRLDDDLYIKISKYNPNN 168 +S I+ S ++Q Q+ T + L E N+ + + ++ + N Sbjct: 111 TVSLGAIDEWVASPLQQ--QALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQG 168 Query: 169 TLQGIFIVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRKSPISKD-ISIMK---- 222 G+ I RD + + Y YA+S +I+ D+ I+ G H+K K+ + I+ Sbjct: 169 QPVGVEIFHYRDDLSLESYIYARSATIEDDKTWIL--HGVNHKKWLNGKETLEILDNLAW 226 Query: 223 ---FKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLE 266 F S L+ S ++ ++ + +++L + YR L E Sbjct: 227 QSTFTSMNLEELSMPGNSFSVRQLNHYINYLQETGQPSSEYRLALWE 273 >gi|283954397|ref|ZP_06371917.1| hypothetical protein C414_000220013 [Campylobacter jejuni subsp. jejuni 414] gi|283794014|gb|EFC32763.1| hypothetical protein C414_000220013 [Campylobacter jejuni subsp. jejuni 414] Length = 341 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 47/210 (22%), Positives = 86/210 (40%), Gaps = 22/210 (10%) Query: 9 LRCIGRSFL---MSCLFIVF-IAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 LR + FL +S F++F I ++ +Q L SS S LLK+ G+++P +L Sbjct: 5 LRYVLNQFLSTNLSIFFVLFTIVSMVFFIQLAKLTSSIQISFLDLLKLYGFMLPRILIFT 64 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P F + T L +++ E +++ G S + L K L +A L+S + + ++ P Sbjct: 65 LPISFFISLTLALFRLSKENESIVLFTLGFSPMILAKFFLKIASLISALMLVVALVMIPI 124 Query: 125 CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTH 184 + + F+Y K ++ L + ++ +D+ + Sbjct: 125 VFELQDNFVNYKSIQVKFNY---------------KTGEFG-QKFLDWMIFIEKQDSGKY 168 Query: 185 K--IYYAQSGSIDLDRQAIILNDGEVHRKS 212 + I Y D Q II + V RK Sbjct: 169 ENIIMYHPKHKADDKEQLIIAKEAHVQRKD 198 >gi|323978946|gb|EGB74026.1| permease YjgP/YjgQ family protein [Escherichia coli TW10509] Length = 359 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 19/164 (11%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I +TG S RI L+ A++ I Sbjct: 57 LPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALV------ALVAGILW 110 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEE------NLFFRLDDDLYIKISKYNPNN 168 +S I+ S ++Q Q+ T + L E N+ + + ++ + N Sbjct: 111 TVSLGAIDEWVASPLQQ--QALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQG 168 Query: 169 TLQGIFIVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRK 211 G+ I RD + + Y YA+S +I+ D+ I+ G H+K Sbjct: 169 QPVGVEIFHYRDDLSLESYIYARSATIEDDKTWIL--HGVNHKK 210 >gi|134302362|ref|YP_001122331.1| YjgP/YjgQ permease [Francisella tularensis subsp. tularensis WY96-3418] gi|134050139|gb|ABO47210.1| putative permease YjgP/YjgQ family [Francisella tularensis subsp. tularensis WY96-3418] Length = 351 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 49/221 (22%), Positives = 97/221 (43%), Gaps = 24/221 (10%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLI--P 58 M + YI R + SFL+ + + ++ L + VS++T +++ I LI P Sbjct: 1 MNRIDRYIFRTVFSSFLIVSIIFCILFFIFTYLAQ---VSNNTANVSNFELIINTLIQLP 57 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 +L + P C + L+ + N+E++++ + G S + K V+ + ++ S+ + Sbjct: 58 GILYTLLPACAMVGALMGLSLLANNSEIIVLRSFGRSTAQIAKGVILVGLIGSVTTMVFG 117 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVD 177 I P + +Q+ +Y +L+F+ D ++ I+ P N GI Sbjct: 118 GYIAPILQ---RQVDTN-----MVTYNTHDLWFKTPDG-FMNIANIEPTNGKAYGIRKFM 168 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILN---------DGEVH 209 +D + +I YA+S + D A + N DG+ H Sbjct: 169 VQDNKVREIRYAESATYINDASANVFNIRKIIFPASDGQKH 209 >gi|323966510|gb|EGB61943.1| permease YjgP/YjgQ family protein [Escherichia coli M863] gi|327251763|gb|EGE63449.1| hypothetical protein ECSTEC7V_3615 [Escherichia coli STEC_7v] Length = 359 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 19/164 (11%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I +TG S RI L+ A++ I Sbjct: 57 LPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALV------ALVAGILW 110 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEE------NLFFRLDDDLYIKISKYNPNN 168 +S I+ S ++Q Q+ T + L E N+ + + ++ + N Sbjct: 111 TVSLGTIDEWVASPLQQ--QALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQG 168 Query: 169 TLQGIFIVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRK 211 G+ I RD + + Y YA+S +I+ D+ I+ G H+K Sbjct: 169 QPVGVEIFHYRDDLSLESYIYARSATIEDDKTWIL--HGVNHKK 210 >gi|302338545|ref|YP_003803751.1| permease YjgP/YjgQ family protein [Spirochaeta smaragdinae DSM 11293] gi|301635730|gb|ADK81157.1| permease YjgP/YjgQ family protein [Spirochaeta smaragdinae DSM 11293] Length = 381 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 48/240 (20%), Positives = 93/240 (38%), Gaps = 20/240 (8%) Query: 55 YLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFL 114 Y +P +L PF + T + + + E+ G S + L PV+ L ++LS Sbjct: 64 YSLPAILAFTFPFSALLGTVMAIGRFSSDNEITAFRALGVSHLRLFFPVMLLGLILSGIS 123 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF 174 F S +++ P+ +L + LE R D + ++ + + + Sbjct: 124 FFSNDVLLPRGTVQFGRLYRDILYSNPALELEPYAVRRYKDT--VLVTGAISDREISDLV 181 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQ---AIILNDGEVHRKSPISKDISIMKFKSYTLQ-- 229 I+D + Q ++ A+ ++ D + I L EV + ++ F + T++ Sbjct: 182 ILDHDEDQNERMLSAKRAYLEQDEKENGVISLRLEEVFGHTAKKREGDFDYFTADTMEYN 241 Query: 230 ------TESANS------STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLT 277 T S N+ ST L Q + + N + L+ Y+ EF+K+L Sbjct: 242 ILLSSFTYSINNLTPREMSTAALYGEIQTMEAKKKEDQNKKRF-DRTLQLYKIEFYKKLA 300 >gi|293449327|ref|ZP_06663748.1| hypothetical protein ECCG_02358 [Escherichia coli B088] gi|291322417|gb|EFE61846.1| hypothetical protein ECCG_02358 [Escherichia coli B088] Length = 359 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 19/164 (11%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I +TG S RI L+ A++ I Sbjct: 57 LPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALV------ALVAGILW 110 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEE------NLFFRLDDDLYIKISKYNPNN 168 +S I+ S ++Q Q+ T + L E N+ + + ++ + N Sbjct: 111 TVSLGAIDEWVASPLQQ--QALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQG 168 Query: 169 TLQGIFIVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRK 211 G+ I RD + + Y YA+S +I+ D+ I+ G H+K Sbjct: 169 QPVGVEIFHYRDDLSLESYIYARSATIEDDKTWIL--HGVNHKK 210 >gi|313203466|ref|YP_004042123.1| permease yjgp/yjgq family protein [Paludibacter propionicigenes WB4] gi|312442782|gb|ADQ79138.1| permease YjgP/YjgQ family protein [Paludibacter propionicigenes WB4] Length = 493 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 27/132 (20%), Positives = 58/132 (43%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K + YI + FLM+ L +FI + + + ++ + ++L + Y I +V Sbjct: 4 IKKIDSYIFKRFITQFLMTFLICIFILLMQFLWKHVSELIGKGVGWSVLAEFFIYAIFSV 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +PM P + + ++ N EL + G S +I+P++ + + F N Sbjct: 64 VPMALPLAILLASLMTFGNLGENFELTAMKAAGISLFRIIRPLIIFISFVCVGAFFFSNY 123 Query: 121 IEPKCRSTIKQL 132 + P ++ + L Sbjct: 124 VLPVAQTKLYTL 135 >gi|311281181|ref|YP_003943412.1| permease YjgP/YjgQ family protein [Enterobacter cloacae SCF1] gi|308750376|gb|ADO50128.1| permease YjgP/YjgQ family protein [Enterobacter cloacae SCF1] Length = 366 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 42/203 (20%), Positives = 79/203 (38%), Gaps = 23/203 (11%) Query: 84 TELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFS 143 +E+ ++ G S+ L+K + LA+ I ++ P ++ A+A+ + Sbjct: 83 SEITVMHACGLSKAVLVKAAMILALFTGIVAALNVMWAGPWSSRHQDEVLAEAKANPGMA 142 Query: 144 YLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHK--IYYAQSGSIDLDR--- 198 L + F + D + + + +F+ R + + A SG+I + Sbjct: 143 ALAQGQFQQASDGNSVLFIESVDGKKFRDVFLAQIRTKGNARPSVVVADSGNITQQKDGS 202 Query: 199 QAIILNDGEVHRKSPISKDISIMKFKSYTL----QTESANSSTIVLKANDQNLSFLLNPN 254 Q + LN+G + + +D + FK+Y QT S + S N+ L N + Sbjct: 203 QVVHLNEGTRFEGTAMLRDFRVTDFKNYQAIIGHQTVSLDPS----DTEQMNMLTLWNTD 258 Query: 255 PNNPNYRPELLETYRSEFHKRLT 277 N R+E H RLT Sbjct: 259 TNGA----------RAELHWRLT 271 >gi|291284362|ref|YP_003501180.1| Permease YjgP/YjgQ family protein precursor [Escherichia coli O55:H7 str. CB9615] gi|290764235|gb|ADD58196.1| Permease YjgP/YjgQ family protein precursor [Escherichia coli O55:H7 str. CB9615] gi|320656363|gb|EFX24270.1| Permease YjgP/YjgQ family protein precursor [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661734|gb|EFX29142.1| Permease YjgP/YjgQ family protein precursor [Escherichia coli O55:H7 str. USDA 5905] gi|320666885|gb|EFX33861.1| Permease YjgP/YjgQ family protein precursor [Escherichia coli O157:H7 str. LSU-61] Length = 359 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 19/164 (11%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I +TG S RI L+ A++ I Sbjct: 57 LPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALV------ALVAGILW 110 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEE------NLFFRLDDDLYIKISKYNPNN 168 +S I+ S ++Q Q+ T + L E N+ + + ++ + N Sbjct: 111 TVSLGAIDEWVASPLQQ--QALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQG 168 Query: 169 TLQGIFIVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRK 211 G+ I RD + + Y YA+S +I+ D+ I+ G H+K Sbjct: 169 QPVGVEIFHYRDDLSLESYIYARSATIEDDKTWIL--HGVNHKK 210 >gi|296162276|ref|ZP_06845070.1| permease YjgP/YjgQ family protein [Burkholderia sp. Ch1-1] gi|295887430|gb|EFG67254.1| permease YjgP/YjgQ family protein [Burkholderia sp. Ch1-1] Length = 365 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 35/166 (21%), Positives = 75/166 (45%), Gaps = 14/166 (8%) Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLA----ILLSIFLFISENIIEPKCRSTIKQ 131 VLT +++E+++ ++G S IKP+ A IL+ F+F+ P K Sbjct: 75 VLTRWYKDSEMVVWLSSGVSLTQFIKPIGIFATPIIILIMFFVFVGW----PWSNQQSKL 130 Query: 132 LSAKAQLALTFSYLEENLFFRLDDDLYIK-ISKYNPNNT-LQGIFIVDSRDTQTHKIYYA 189 + A+ Q S L F + I K +P+ ++ +F+ + + + + + + Sbjct: 131 IRARFQQRDEVSLLAPGQFRESATSHRVFFIEKMSPDQARVENVFVTSTENGKVN-VVVS 189 Query: 190 QSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 ++G + + ++L +G + P D IM+F+ Y ++ +S Sbjct: 190 KTGHTETRKNGDRFVVLENGRRYDGQPGQPDFRIMEFERYGVKIQS 235 >gi|331679053|ref|ZP_08379725.1| putative permease [Escherichia coli H591] gi|331073118|gb|EGI44441.1| putative permease [Escherichia coli H591] Length = 386 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 19/164 (11%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I +TG S RI L+ A++ I Sbjct: 84 LPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALV------ALVAGILW 137 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEE------NLFFRLDDDLYIKISKYNPNN 168 +S I+ S ++Q + Q+ T + L E N+ + + ++ + N Sbjct: 138 TVSLGAIDEWVASPLQQQA--LQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQG 195 Query: 169 TLQGIFIVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRK 211 G+ I RD + + Y YA+S +I+ D+ I+ G H+K Sbjct: 196 QPVGVEIFHYRDDLSLESYIYARSATIEDDKTWIL--HGVNHKK 237 >gi|313674434|ref|YP_004052430.1| permease yjgp/yjgq family protein [Marivirga tractuosa DSM 4126] gi|312941132|gb|ADR20322.1| permease YjgP/YjgQ family protein [Marivirga tractuosa DSM 4126] Length = 357 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 37/162 (22%), Positives = 74/162 (45%), Gaps = 9/162 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL+ +F+ L I+ I VI ++ + L +L G IP + Sbjct: 1 MKILDKYILKKFLSTFVFVVLIILAIVTVIDYTEKNDDFMEHNLGLIDVLPYYGAFIPWI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++TP + V + M +TE++ + +G S L+ P + A L+++ F Sbjct: 61 GNLITPITIFIAAVFVTSKMAGHTEIVAMLASGMSFRRLLVPYMIGAGLVALSSFYLNAY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS 162 + P K ++A +Y+++ +F + D+++KI+ Sbjct: 121 VIPDAN--------KTRIAFETAYIKKPFYFT-ERDIHLKIA 153 >gi|322435367|ref|YP_004217579.1| permease YjgP/YjgQ family protein [Acidobacterium sp. MP5ACTX9] gi|321163094|gb|ADW68799.1| permease YjgP/YjgQ family protein [Acidobacterium sp. MP5ACTX9] Length = 813 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 63/146 (43%), Gaps = 27/146 (18%) Query: 7 YILRCIGRSFLM-----SCLFIVF-----IAWVIQILQRINLVSSSTESLNILLKISGYL 56 YI+R G +F + S +F++F I +I+ RI V+ LN L Sbjct: 428 YIMREFGATFALVLAAFSMVFLIFTFFELIGDIIR--NRIAFVTVGDYLLN--------L 477 Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 IP +L VTP C + S+ + +E + +G S ++ PVL L +++ LF Sbjct: 478 IPYILYNVTPLCVLVAVLVTFGSLAKTSEFTAMKASGVSLYRVVTPVLVLTAVIACSLFA 537 Query: 117 SENIIEPKC-------RSTIKQLSAK 135 + P+ RS IK A+ Sbjct: 538 FDEFYLPQANRRQEALRSVIKGKPAQ 563 >gi|91782195|ref|YP_557401.1| membrane protein, YjgP/YjgQ like [Burkholderia xenovorans LB400] gi|91686149|gb|ABE29349.1| membrane protein, YjgP/YjgQ like protein [Burkholderia xenovorans LB400] Length = 365 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 35/166 (21%), Positives = 75/166 (45%), Gaps = 14/166 (8%) Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLA----ILLSIFLFISENIIEPKCRSTIKQ 131 VLT +++E+++ ++G S IKP+ A IL+ F+F+ P K Sbjct: 75 VLTRWYKDSEMVVWLSSGVSLTQFIKPIGIFATPIIILIMFFVFVGW----PWSNQQSKL 130 Query: 132 LSAKAQLALTFSYLEENLFFRLDDDLYIK-ISKYNPNNT-LQGIFIVDSRDTQTHKIYYA 189 + A+ Q S L F + I K +P+ ++ +F+ + + + + + + Sbjct: 131 IRARFQQRDEVSLLAPGQFRESATSHRVFFIEKMSPDQARVENVFVTSTENGKVN-VVVS 189 Query: 190 QSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 ++G + + ++L +G + P D IM+F+ Y ++ +S Sbjct: 190 KTGHTETRKNGDRFVVLENGRRYDGQPGQPDFRIMEFERYGVKIQS 235 >gi|126175308|ref|YP_001051457.1| permease YjgP/YjgQ family protein [Shewanella baltica OS155] gi|153001630|ref|YP_001367311.1| permease YjgP/YjgQ family protein [Shewanella baltica OS185] gi|217972441|ref|YP_002357192.1| permease YjgP/YjgQ family protein [Shewanella baltica OS223] gi|125998513|gb|ABN62588.1| permease YjgP/YjgQ family protein [Shewanella baltica OS155] gi|151366248|gb|ABS09248.1| permease YjgP/YjgQ family protein [Shewanella baltica OS185] gi|217497576|gb|ACK45769.1| permease YjgP/YjgQ family protein [Shewanella baltica OS223] Length = 352 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 34/173 (19%), Positives = 73/173 (42%), Gaps = 1/173 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK +LYI R + + + L + ++ +I+ + ++ LV T S+ +L+P Sbjct: 1 MKILDLYIARVLLSTSALCLLVLTGLSGIIKWVDQLRLVGRGTYSMMDAGIYVLFLVPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + + N+EL+++ +G SR+ + + A+ L + + + Sbjct: 61 IEMFFPMAVLLGALIGMGMLASNSELVVMQASGMSRLQITMSAMKTAVPLMLLVMVLGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI 173 P +L A + ++ + D DL++ I + N L I Sbjct: 121 GAPIAEQKANELQAIKLSGGSLIKSHRGIWAK-DGDLFVNIGEVENINKLNNI 172 >gi|302338546|ref|YP_003803752.1| permease YjgP/YjgQ family protein [Spirochaeta smaragdinae DSM 11293] gi|301635731|gb|ADK81158.1| permease YjgP/YjgQ family protein [Spirochaeta smaragdinae DSM 11293] Length = 360 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 46/208 (22%), Positives = 84/208 (40%), Gaps = 27/208 (12%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK +L +LR +S +F F+ ++++ + + +L +L S P Sbjct: 1 MKKLDLMVLRAFFHILFLSLMFFSFVVVLVELFSNLWRYLQNDAALAEILFTSLLYYPKA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIF-LFISEN 119 + + P L S N ELL + ++G S + P++ L+ LLS+ F E Sbjct: 61 ITLALPPSILFAIAFTLGSYQANNELLALFSSGVSLLRFTVPIIVLSALLSVGSYFFQEY 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 ++ PK SA+ Q+ L D L + S N NN + I+ Sbjct: 121 LVIPK--------SAQKQI--------------LTDRLSGRSSVGNNNN----VVILSGE 154 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGE 207 +KI Y + + L ++++ D + Sbjct: 155 GRFLYKIDYYNAKNRSLTGVSVLIRDSQ 182 >gi|332753041|gb|EGJ83425.1| hypothetical protein SF434370_3220 [Shigella flexneri 4343-70] gi|332998924|gb|EGK18515.1| hypothetical protein SFVA6_3889 [Shigella flexneri VA-6] gi|333000167|gb|EGK19750.1| hypothetical protein SFK218_4002 [Shigella flexneri K-218] Length = 359 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 19/164 (11%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I +TG S RI L+ A++ I Sbjct: 57 LPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALV------ALVAGILW 110 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEE------NLFFRLDDDLYIKISKYNPNN 168 +S I+ S ++Q Q+ T + L E N+ + + ++ + N Sbjct: 111 TVSLGAIDEWVASPLQQ--QALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQG 168 Query: 169 TLQGIFIVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRK 211 G+ I RD + + Y YA+S +I+ D+ ++ G H+K Sbjct: 169 QPVGVEIFHYRDDLSLESYIYARSATIEDDKTWVL--HGVNHKK 210 >gi|296125162|ref|YP_003632414.1| permease YjgP/YjgQ family protein [Brachyspira murdochii DSM 12563] gi|296016978|gb|ADG70215.1| permease YjgP/YjgQ family protein [Brachyspira murdochii DSM 12563] Length = 356 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 27/114 (23%), Positives = 48/114 (42%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+L+ F S L V + + + R++ + E +N + P Sbjct: 1 MKKLNAYLLKEFLSFFFGSLLLFVVLVTIADLSSRLSFYTEHPELINYFITYHLARAPHN 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFL 114 + P +T VL + +N E+L I+N+G S P+ + I+L + L Sbjct: 61 TYYIFPVALMFASTYVLGTFVKNKEMLAIENSGISLFKFSMPMFVIVIMLCLIL 114 >gi|24114287|ref|NP_708797.1| hypothetical protein SF3026 [Shigella flexneri 2a str. 301] gi|30064334|ref|NP_838505.1| hypothetical protein S3227 [Shigella flexneri 2a str. 2457T] gi|24053443|gb|AAN44504.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|30042591|gb|AAP18315.1| hypothetical protein S3227 [Shigella flexneri 2a str. 2457T] gi|281602370|gb|ADA75354.1| putative permease, YjgP/YjgQ family [Shigella flexneri 2002017] gi|313648097|gb|EFS12543.1| hypothetical protein SF2457T_3697 [Shigella flexneri 2a str. 2457T] gi|332752655|gb|EGJ83040.1| hypothetical protein SFK671_3613 [Shigella flexneri K-671] gi|332754439|gb|EGJ84805.1| hypothetical protein SF274771_3586 [Shigella flexneri 2747-71] gi|332765461|gb|EGJ95679.1| hypothetical protein SF293071_3543 [Shigella flexneri 2930-71] gi|333014735|gb|EGK34080.1| hypothetical protein SFK304_3819 [Shigella flexneri K-304] Length = 359 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 19/164 (11%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I +TG S RI L+ A++ I Sbjct: 57 LPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALV------ALVAGILW 110 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEE------NLFFRLDDDLYIKISKYNPNN 168 +S I+ S ++Q Q+ T + L E N+ + + ++ + N Sbjct: 111 TVSLGAIDEWVASPLQQ--QALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQG 168 Query: 169 TLQGIFIVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRK 211 G+ I RD + + Y YA+S +I+ D+ ++ G H+K Sbjct: 169 QPVGVEIFHYRDDLSLESYIYARSATIEDDKTWVL--HGVNHKK 210 >gi|291279033|ref|YP_003495868.1| hypothetical protein DEFDS_0631 [Deferribacter desulfuricans SSM1] gi|290753735|dbj|BAI80112.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1] Length = 344 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 50/247 (20%), Positives = 101/247 (40%), Gaps = 36/247 (14%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ E Y+L+ + FL+ LF +FI + +I+ L+ + + ++ IP+ Sbjct: 1 MRITEKYVLKELVPVFLVGNLFFIFILLIDKIVDLSELILAKNVPFFFVAELIIAYIPSF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKP-------VLFLAILLSIF 113 L + P + V ++ ++EL+ + + G + + KP L LA+L+S++ Sbjct: 61 LVITIPTSTLLSALIVYGRLSDDSELVAMKSLGADKYNIFKPSILLGFISLVLALLMSLY 120 Query: 114 LFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI 173 L PK + + ++ + +EN + + K N G+ Sbjct: 121 LM-------PKGNDFAIERLMQISKYVSINDFKENELYTEIPGFVLYTDKRVDKNKFLGL 173 Query: 174 FIVDSRDTQTHKIYYAQSGSI----------DLDRQAIILNDGEVHRKSPISKDISIMKF 223 I++ +D H + A+ G I +LD +I GE+ K ++F Sbjct: 174 IIINKKD---HIVIQAKKGEIVNTTEGSLVFNLDNGVLIDTKGEIPSK---------LEF 221 Query: 224 KSYTLQT 230 KS+ + Sbjct: 222 KSFVVNV 228 >gi|218696688|ref|YP_002404355.1| hypothetical protein EC55989_3395 [Escherichia coli 55989] gi|218353420|emb|CAU99485.1| conserved hypothetical protein; putative membrane protein [Escherichia coli 55989] Length = 386 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 19/164 (11%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I +TG S RI L+ A++ I Sbjct: 84 LPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALV------ALVAGILW 137 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEE------NLFFRLDDDLYIKISKYNPNN 168 +S I+ S ++Q + Q+ T + L E N+ + + ++ + N Sbjct: 138 TVSLGAIDEWVASPLQQQA--LQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQG 195 Query: 169 TLQGIFIVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRK 211 G+ I RD + + Y YA+S +I+ D+ I+ G H+K Sbjct: 196 QPVGVEIFHYRDDLSLESYIYARSATIEDDKTWIL--HGVNHKK 237 >gi|260845739|ref|YP_003223517.1| hypothetical protein ECO103_3663 [Escherichia coli O103:H2 str. 12009] gi|257760886|dbj|BAI32383.1| conserved predicted membrane protein [Escherichia coli O103:H2 str. 12009] Length = 359 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 19/164 (11%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I +TG S RI L+ A++ I Sbjct: 57 LPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALV------ALVAGILW 110 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEE------NLFFRLDDDLYIKISKYNPNN 168 +S I+ S ++Q Q+ T + L E N+ + + ++ + N Sbjct: 111 TVSLGAIDEWVASPLQQ--QALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQG 168 Query: 169 TLQGIFIVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRK 211 G+ I RD + + Y YA+S +I+ D+ I+ G H+K Sbjct: 169 QPVGVEIFHYRDDLSLESYIYARSATIEDDKTWIL--HGVNHKK 210 >gi|113474402|ref|YP_720463.1| permease YjgP/YjgQ [Trichodesmium erythraeum IMS101] gi|110165450|gb|ABG49990.1| permease YjgP/YjgQ [Trichodesmium erythraeum IMS101] Length = 392 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 49/226 (21%), Positives = 95/226 (42%), Gaps = 17/226 (7%) Query: 24 VFIAWVIQILQRINLVSSSTES-LNILLKISGYLI--PTVLPMVTPFCFAMETTNVLTSM 80 +F + I + LV TES L I + I +L+ P + + P + T V + M Sbjct: 40 LFSSLGITVGAMFELVRKVTESGLPISIAIQVFLLKMPEFIGLAFPMAMILTTLMVYSQM 99 Query: 81 NRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLAL 140 + ++E++ + + G S +I P + L++ ++ F II P + K Sbjct: 100 SGHSEIVALRSCGISIYRMIIPTIILSLTVTTLSFALNEIIVPSANYQASLILEKTLEQE 159 Query: 141 TFSYLEENLFF----------RLDDDLYIKI---SKYNPNNTLQGIFIVDSRDTQTHKIY 187 + EEN+F+ DD ++ K++ +QG+ I+D +I Sbjct: 160 NPPFKEENIFYPEFGKVKQPDGSQDDTLTRLFYAEKFD-GKYMQGVTILDRSQYGVDQIV 218 Query: 188 YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 ++S + + L +G ++ SP +I+KF L+ +A Sbjct: 219 SSESATWNSAENIWDLFNGTIYLVSPDGSYRNIVKFDHKKLKLSTA 264 >gi|313672806|ref|YP_004050917.1| permease yjgp/yjgq family protein [Calditerrivibrio nitroreducens DSM 19672] gi|312939562|gb|ADR18754.1| permease YjgP/YjgQ family protein [Calditerrivibrio nitroreducens DSM 19672] Length = 345 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 36/158 (22%), Positives = 72/158 (45%), Gaps = 25/158 (15%) Query: 76 VLTSMNR---NTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP--------K 124 V+T+ NR + EL+++ + G S ++L+KP ++ IL ++ F++ + P Sbjct: 73 VMTAHNRLSSDAELVVMKSLGLSPMSLLKPTIYFGILATLLAFLTSFYLLPYGNKYAIYN 132 Query: 125 CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD---- 180 + T++ +S K ++EN F++ + I + K +N I ++D + Sbjct: 133 LKRTVEYVSLKD--------IKENEFYKEIPSIAIYVKKKVDDNKFLQITLIDEKGGSLI 184 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISK 216 T Y + G++ DL AII + + K K Sbjct: 185 TAAEADAYQKFGAVVFDLKNGAIIQGKNDRYGKIEFKK 222 >gi|260857119|ref|YP_003231010.1| putative inner membrane protein [Escherichia coli O26:H11 str. 11368] gi|257755768|dbj|BAI27270.1| predicted inner membrane protein [Escherichia coli O26:H11 str. 11368] Length = 359 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 37/158 (23%), Positives = 70/158 (44%), Gaps = 7/158 (4%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I +TG S RI L+ VL IL ++ L Sbjct: 57 LPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALV--VLVAGILWTVSL 114 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF 174 + + + Q+ + A + N+ + + ++ + N G+ Sbjct: 115 GAIDEWVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVE 174 Query: 175 IVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRK 211 I RD + + Y YA+S +I D+ ++ G H+K Sbjct: 175 IFHYRDDLSLESYIYARSATIKDDKTWVL--HGVNHKK 210 >gi|256019097|ref|ZP_05432962.1| hypothetical protein ShiD9_09284 [Shigella sp. D9] Length = 359 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 19/164 (11%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I +TG S RI L+ A++ I Sbjct: 57 LPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALV------ALVAGILW 110 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEE------NLFFRLDDDLYIKISKYNPNN 168 +S I+ S ++Q Q+ T + L E N+ + + ++ + N Sbjct: 111 TVSLGAIDEWVASPLQQ--QALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQG 168 Query: 169 TLQGIFIVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRK 211 G+ I RD + + Y YA+S +I+ D+ I+ G H+K Sbjct: 169 QPVGVEIFHYRDDLSLESYIYARSATIEDDKTWIL--HGVNHKK 210 >gi|191172563|ref|ZP_03034103.1| putative permease, YjgP/YjgQ family [Escherichia coli F11] gi|190907231|gb|EDV66830.1| putative permease, YjgP/YjgQ family [Escherichia coli F11] gi|324011926|gb|EGB81145.1| hypothetical protein HMPREF9533_04084 [Escherichia coli MS 60-1] Length = 359 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 19/164 (11%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I +TG S RI L+ A++ I Sbjct: 57 LPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALV------ALVAGILW 110 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEE------NLFFRLDDDLYIKISKYNPNN 168 +S I+ S ++Q Q+ T + L E N+ + + ++ + N Sbjct: 111 TVSLGAIDEWGASPLQQ--QALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQG 168 Query: 169 TLQGIFIVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRK 211 G+ I RD + + Y YA+S +I+ D+ I+ G H+K Sbjct: 169 QPVGVEIFHYRDDLSLESYIYARSATIEDDKTWIL--HGVNHKK 210 >gi|300993118|ref|ZP_07180204.1| hypothetical protein HMPREF9553_04258 [Escherichia coli MS 200-1] gi|300305133|gb|EFJ59653.1| hypothetical protein HMPREF9553_04258 [Escherichia coli MS 200-1] Length = 359 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 19/164 (11%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I +TG S RI L+ A++ I Sbjct: 57 LPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALV------ALVAGILW 110 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEE------NLFFRLDDDLYIKISKYNPNN 168 +S I+ S ++Q Q+ T + L E N+ + + ++ + N Sbjct: 111 TVSLGAIDEWGASPLQQ--QALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQG 168 Query: 169 TLQGIFIVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRK 211 G+ I RD + + Y YA+S +I+ D+ I+ G H+K Sbjct: 169 QPVGVEIFHYRDDLSLESYIYARSATIEDDKTWIL--HGVNHKK 210 >gi|281180020|dbj|BAI56350.1| conserved hypothetical protein [Escherichia coli SE15] gi|330909040|gb|EGH37554.1| permease Ygh-P2, YjgP/YjgQ family [Escherichia coli AA86] Length = 359 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 19/164 (11%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I +TG S RI L+ A++ I Sbjct: 57 LPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALV------ALVAGILW 110 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEE------NLFFRLDDDLYIKISKYNPNN 168 +S I+ S ++Q Q+ T + L E N+ + + ++ + N Sbjct: 111 TVSLGAIDEWGASPLQQ--QALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQG 168 Query: 169 TLQGIFIVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRK 211 G+ I RD + + Y YA+S +I+ D+ I+ G H+K Sbjct: 169 QPVGVEIFHYRDDLSLESYIYARSATIEDDKTWIL--HGVNHKK 210 >gi|331648770|ref|ZP_08349858.1| putative permease [Escherichia coli M605] gi|331042517|gb|EGI14659.1| putative permease [Escherichia coli M605] Length = 386 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 19/164 (11%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I +TG S RI L+ A++ I Sbjct: 84 LPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALV------ALVAGILW 137 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEE------NLFFRLDDDLYIKISKYNPNN 168 +S I+ S ++Q + Q+ T + L E N+ + + ++ + N Sbjct: 138 TVSLGAIDEWGASPLQQQA--LQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQG 195 Query: 169 TLQGIFIVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRK 211 G+ I RD + + Y YA+S +I+ D+ I+ G H+K Sbjct: 196 QPVGVEIFHYRDDLSLESYIYARSATIEDDKTWIL--HGVNHKK 237 >gi|160876366|ref|YP_001555682.1| permease YjgP/YjgQ family protein [Shewanella baltica OS195] gi|160861888|gb|ABX50422.1| permease YjgP/YjgQ family protein [Shewanella baltica OS195] gi|315268556|gb|ADT95409.1| permease YjgP/YjgQ family protein [Shewanella baltica OS678] Length = 352 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 34/173 (19%), Positives = 73/173 (42%), Gaps = 1/173 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK +LYI R + + + L + ++ +I+ + ++ LV T S+ +L+P Sbjct: 1 MKILDLYIARVLLSTSALCLLVLTGLSGIIKWVDQLRLVGRGTYSMMDAGIYVLFLVPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + + N+EL+++ +G SR+ + + A+ L + + + Sbjct: 61 IEMFFPMAVLLGALIGMGMLASNSELVVMQASGMSRLQITMSAMKTAVPLMLLVMVLGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI 173 P +L A + ++ + D DL++ I + N L I Sbjct: 121 GAPIAEQKANELQAIKLSGGSLIKSHRGIWAK-DGDLFVNIGEVENINKLNNI 172 >gi|294508120|ref|YP_003572178.1| Conserved hypothetical protein containing permease domain [Salinibacter ruber M8] gi|294344448|emb|CBH25226.1| Conserved hypothetical protein containing permease domain [Salinibacter ruber M8] Length = 492 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 38/190 (20%), Positives = 79/190 (41%), Gaps = 10/190 (5%) Query: 46 LNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLF 105 +++++++ Y + ++ + P + + + +I +TG S ++ P L Sbjct: 66 VSVIVELIAYNLAYMVVLAVPMSVLLAALMAFGELAESQYYTVIKSTGISFGQIVWPALV 125 Query: 106 LAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN 165 +A LL + N++ P+ +QL + + L +F+ +D I + Sbjct: 126 VAALLMGGMLYFNNVMLPEANHRARQLWSDIRGKRPGFELRPGIFYEDMEDYSILVQDRP 185 Query: 166 PN-NTLQGIFIVD---SRDTQTHKIYYAQSGSIDLD----RQAIILNDGEVHRKSPISKD 217 P N L + I D RD Q + A+ G I+ R + L +GE+HR P + Sbjct: 186 PGTNKLIDVTIYDYTQGRDRQA--VIKAERGVIESSAGGARLTLTLRNGEMHRPLPPDAN 243 Query: 218 ISIMKFKSYT 227 +++ T Sbjct: 244 NQSERYERLT 253 >gi|146340303|ref|YP_001205351.1| putative permease [Bradyrhizobium sp. ORS278] gi|146193109|emb|CAL77120.1| putative permease [Bradyrhizobium sp. ORS278] Length = 365 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 25/106 (23%), Positives = 52/106 (49%), Gaps = 2/106 (1%) Query: 30 IQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLII 89 I++++R + ++S+ S ++ + S + +P +L + PFC + +++R EL++ Sbjct: 37 IEMVRRTSGLASA--SALMVAETSLFRVPQLLEKMMPFCVLIGAMTCYLALSRRLELVVA 94 Query: 90 DNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAK 135 G S I P L AI+L + N + R K++ A+ Sbjct: 95 RAAGVSAWQFIAPALASAIVLGLMATTLYNPMSANLRELSKRMEAE 140 >gi|332280200|ref|ZP_08392613.1| YjgP/YjgQ permease [Shigella sp. D9] gi|332102552|gb|EGJ05898.1| YjgP/YjgQ permease [Shigella sp. D9] Length = 386 Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust. Identities = 37/158 (23%), Positives = 70/158 (44%), Gaps = 7/158 (4%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I +TG S RI L+ L IL ++ L Sbjct: 84 LPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALV--ALVAGILWTVSL 141 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF 174 + + + Q+ + A + N+ + + ++ + N G+ Sbjct: 142 GAIDEWVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVE 201 Query: 175 IVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRK 211 I RD + + Y YA+S +I+ D+ I+ G H+K Sbjct: 202 IFHYRDDLSLESYIYARSATIEDDKTWIL--HGVNHKK 237 >gi|300900316|ref|ZP_07118495.1| conserved hypothetical protein [Escherichia coli MS 198-1] gi|300356206|gb|EFJ72076.1| conserved hypothetical protein [Escherichia coli MS 198-1] Length = 315 Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust. Identities = 37/158 (23%), Positives = 70/158 (44%), Gaps = 7/158 (4%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I +TG S RI L+ L IL ++ L Sbjct: 57 LPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALV--ALVAGILWTVSL 114 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF 174 + + + Q+ + A + N+ + + ++ + N G+ Sbjct: 115 GAIDEWVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVE 174 Query: 175 IVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRK 211 I RD + + Y YA+S +I+ D+ I+ G H+K Sbjct: 175 IFHYRDDLSLESYIYARSATIEDDKTWIL--HGVNHKK 210 >gi|222034702|emb|CAP77444.1| hypothetical protein LF82_487 [Escherichia coli LF82] gi|312947540|gb|ADR28367.1| hypothetical protein NRG857_14785 [Escherichia coli O83:H1 str. NRG 857C] Length = 359 Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 19/164 (11%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I +TG S RI L+ A++ I Sbjct: 57 LPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALV------ALVAGILW 110 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEE------NLFFRLDDDLYIKISKYNPNN 168 +S I+ S ++Q Q+ T + L E N+ + + ++ + N Sbjct: 111 TVSLGAIDEWVASPLQQ--QALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQG 168 Query: 169 TLQGIFIVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRK 211 G+ I RD + + Y YA+S +I+ D+ ++ G H+K Sbjct: 169 QPVGVEIFHYRDDLSLESYIYARSATIEDDKTWVL--HGVNHKK 210 >gi|170681358|ref|YP_001745244.1| YjgP/YjgQ permease [Escherichia coli SMS-3-5] gi|170519076|gb|ACB17254.1| putative permease, YjgP/YjgQ family [Escherichia coli SMS-3-5] Length = 359 Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 19/164 (11%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I +TG S RI L+ A++ I Sbjct: 57 LPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALV------ALVAGILW 110 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEE------NLFFRLDDDLYIKISKYNPNN 168 +S I+ S ++Q Q+ T + L E N+ + + ++ + N Sbjct: 111 TVSLGAIDEWVASPLQQ--QALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQG 168 Query: 169 TLQGIFIVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRK 211 G+ I RD + + Y +A+S SI+ D+ I+ G H+K Sbjct: 169 QPVGVEIFHYRDDLSLESYIFARSASIEDDKTWIL--HGVNHKK 210 >gi|326336103|ref|ZP_08202275.1| permease YjgP/YjgQ family protein [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691612|gb|EGD33579.1| permease YjgP/YjgQ family protein [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 359 Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust. Identities = 71/344 (20%), Positives = 137/344 (39%), Gaps = 45/344 (13%) Query: 1 MKSFELYILRCIGRSFLM-SCLFIVFI--AWVIQILQRINLVSSSTESLNILLKISGYLI 57 MK + YIL+ R FL S LF++FI ++ ++ ++ + ++K + Sbjct: 1 MKIIDRYILK---RYFLTYSALFLMFIPIGILVDFAEKNQKMTDNHAPTEAIIKYYANFV 57 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 ++ P + + + TE++ + ++G S ++P + A +LS+F+ I Sbjct: 58 IHFANILFPIFLFLSVIWFTSKLAEKTEIVAMLSSGISYNRFLRPYFYGATILSVFVLIM 117 Query: 118 ENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFR-------LDDDLYIKISKYNPNNTL 170 + P + +YL NL+ + ++ + YI +S ++ NN Sbjct: 118 GMFVVPYSSGVYNEFYG--------TYLSPNLYSKGSRLYNQVNKNEYIYVSSFDANNNQ 169 Query: 171 QGIFIVDSRDT--QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT- 227 F+++ D T KI + I+ D HRK DI + T Sbjct: 170 GSDFVLERFDGLKMTDKITASNIQWIENDSIKTYRLSYYTHRKVGEFDDIYEQVIQKDTL 229 Query: 228 LQTESANSSTIVLKANDQNLSFLLNP------NPNNPNYRPELLETYRSEFHKRLTQWLF 281 L ++ + I A +N F LN +PN R Y +++R Sbjct: 230 LNFKTTDLLPIEYAAETKNF-FELNKFIAEERQKGSPNIR-----IYELVYYRRWAAIFN 283 Query: 282 PVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYI 325 I +I + + V++R + ++++FGV GFSY+ Sbjct: 284 VFILTIIGVAVSS----VKKRGG-----MGVNLAFGVLIGFSYV 318 >gi|300931863|ref|ZP_07147160.1| conserved hypothetical protein [Escherichia coli MS 187-1] gi|331664593|ref|ZP_08365499.1| putative permease [Escherichia coli TA143] gi|300460286|gb|EFK23779.1| conserved hypothetical protein [Escherichia coli MS 187-1] gi|331058524|gb|EGI30505.1| putative permease [Escherichia coli TA143] Length = 359 Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 19/164 (11%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I +TG S RI L+ A++ I Sbjct: 57 LPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALV------ALVAGILW 110 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEE------NLFFRLDDDLYIKISKYNPNN 168 +S I+ S ++Q Q+ T + L E N+ + + ++ + N Sbjct: 111 TVSLGAIDEWVASPLQQ--QALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQG 168 Query: 169 TLQGIFIVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRK 211 G+ I RD + + Y +A+S SI+ D+ I+ G H+K Sbjct: 169 QPVGVEIFHYRDDLSLESYIFARSASIEDDKTWIL--HGVNHKK 210 >gi|298374434|ref|ZP_06984392.1| permease [Bacteroides sp. 3_1_19] gi|298268802|gb|EFI10457.1| permease [Bacteroides sp. 3_1_19] Length = 651 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 40/185 (21%), Positives = 82/185 (44%), Gaps = 10/185 (5%) Query: 16 FLMS---CLFIVFIAWVIQILQR-INLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAM 71 FLM+ CLFIV ++Q L R I+ + + +L ++ Y ++PM P + Sbjct: 19 FLMTFGICLFIV----LMQFLWRYIDDMVGKGLGIPVLAEMFMYAALFLVPMALPLAILL 74 Query: 72 ETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQ 131 + ++ ELL + + G S I +++P++ + +S+ F +N + P + + Sbjct: 75 ASLMTFGNLGERLELLAMKSAGVSLIHIMRPLIVTLLFVSVGAFFFQNNVMPVVQVKLYT 134 Query: 132 LSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVD-SRDTQTHKIYYA 189 L + + E F++ + + K +P + L+ + I D S ++ A Sbjct: 135 LLYSMRQKSPELDIPEGSFYKDIPGFNVYVKKKDPKDGLLKDVMIYDYSEGFNNARVIVA 194 Query: 190 QSGSI 194 SG + Sbjct: 195 DSGRL 199 >gi|150010074|ref|YP_001304817.1| hypothetical protein BDI_3493 [Parabacteroides distasonis ATCC 8503] gi|256838884|ref|ZP_05544394.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|149938498|gb|ABR45195.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503] gi|256739803|gb|EEU53127.1| conserved hypothetical protein [Parabacteroides sp. D13] Length = 651 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 40/185 (21%), Positives = 82/185 (44%), Gaps = 10/185 (5%) Query: 16 FLMS---CLFIVFIAWVIQILQR-INLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAM 71 FLM+ CLFIV ++Q L R I+ + + +L ++ Y ++PM P + Sbjct: 19 FLMTFGICLFIV----LMQFLWRYIDDMVGKGLGIPVLAEMFMYAALFLVPMALPLAILL 74 Query: 72 ETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQ 131 + ++ ELL + + G S I +++P++ + +S+ F +N + P + + Sbjct: 75 ASLMTFGNLGERLELLAMKSAGVSLIHIMRPLIVTLLFVSVGAFFFQNNVMPVVQVKLYT 134 Query: 132 LSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVD-SRDTQTHKIYYA 189 L + + E F++ + + K +P + L+ + I D S ++ A Sbjct: 135 LLYSMRQKSPELDIPEGSFYKDIPGFNVYVKKKDPKDGLLKDVMIYDYSEGFNNARVIVA 194 Query: 190 QSGSI 194 SG + Sbjct: 195 DSGRL 199 >gi|86131956|ref|ZP_01050553.1| predicted permease YjgP/YjgQ family [Dokdonia donghaensis MED134] gi|85817778|gb|EAQ38952.1| predicted permease YjgP/YjgQ family [Dokdonia donghaensis MED134] Length = 552 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 34/169 (20%), Positives = 70/169 (41%), Gaps = 1/169 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI ++FL ++FI + + I ++ +++LK + +P++ Sbjct: 1 MKILDRYIFFTFVKTFLSIFTILMFIFVLQSVWLYIQELAGRDLDFDVILKFLLFAMPSL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V P + + + N E + +TG S +K V+F I L I F+ N Sbjct: 61 VTLVLPLSVLLTSIMTFGNFAENYEFAAMKSTGISLQRAMKSVIFFIIFLGIASFLFANY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS-KYNPNN 168 + P + + L + F + DD ++++ KY + Sbjct: 121 VIPASQYEFRNLRNNIGKMKPAMLIRSGQFNEVGDDFNMRVAEKYGDRD 169 >gi|301308106|ref|ZP_07214060.1| putative permease [Bacteroides sp. 20_3] gi|300833576|gb|EFK64192.1| putative permease [Bacteroides sp. 20_3] Length = 651 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 40/185 (21%), Positives = 82/185 (44%), Gaps = 10/185 (5%) Query: 16 FLMS---CLFIVFIAWVIQILQR-INLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAM 71 FLM+ CLFIV ++Q L R I+ + + +L ++ Y ++PM P + Sbjct: 19 FLMTFGICLFIV----LMQFLWRYIDDMVGKGLGIPVLAEMFMYAALFLVPMALPLAILL 74 Query: 72 ETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQ 131 + ++ ELL + + G S I +++P++ + +S+ F +N + P + + Sbjct: 75 ASLMTFGNLGERLELLAMKSAGVSLIHIMRPLIVTLLFVSVGAFFFQNNVMPVVQVKLYT 134 Query: 132 LSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVD-SRDTQTHKIYYA 189 L + + E F++ + + K +P + L+ + I D S ++ A Sbjct: 135 LLYSMRQKSPELDIPEGSFYKDIPGFNVYVKKKDPKDGLLKDVMIYDYSEGFNNARVIVA 194 Query: 190 QSGSI 194 SG + Sbjct: 195 DSGRL 199 >gi|301017326|ref|ZP_07182090.1| conserved hypothetical protein [Escherichia coli MS 69-1] gi|300400299|gb|EFJ83837.1| conserved hypothetical protein [Escherichia coli MS 69-1] Length = 359 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 19/164 (11%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I +TG S RI L+ A++ I Sbjct: 57 LPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALV------ALVAGILW 110 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEE------NLFFRLDDDLYIKISKYNPNN 168 +S I+ S ++Q Q+ T + L E N+ + + ++ + N Sbjct: 111 TVSLGAIDEWVASPLQQ--QALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQG 168 Query: 169 TLQGIFIVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRK 211 G+ I RD + + Y +A+S SI+ D+ I+ G H+K Sbjct: 169 QPVGVEIFHYRDDLSLESYIFARSASIEDDKTWIL--HGVNHKK 210 >gi|188994506|ref|YP_001928758.1| hypothetical protein PGN_0642 [Porphyromonas gingivalis ATCC 33277] gi|188594186|dbj|BAG33161.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC 33277] Length = 651 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 43/205 (20%), Positives = 88/205 (42%), Gaps = 12/205 (5%) Query: 14 RSFLMSCLFIVFIAWVIQILQRI-----NLVSSSTESLNILLKISGYLIPTVLPMVTPFC 68 ++FL L I W + ++Q + ++V ++ IL K+ Y T++PM P Sbjct: 15 QTFLPLLLMTFAICWFVVLMQFLWKYVDDMVGKGLSAI-ILSKMLFYAAMTLVPMALPLG 73 Query: 69 FAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRST 128 + + ++ ELL + + G ++KP+ F + ++ LFI +N + + + Sbjct: 74 VLLASLMTFGNLGERLELLAMKSAGVPLYRIMKPLFFSVVAIACGLFIFQNDLMIQSQVK 133 Query: 129 IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVD-SRDTQTHKI 186 + A+ A + E F+ + ++K + L + I D S+ +I Sbjct: 134 FYTILFSARRATPELEIPEGSFYNGIHGYNLFVAKKDRRTGMLHDMMIYDHSQGFADARI 193 Query: 187 YYAQSGSIDLDRQ----AIILNDGE 207 A SG + +D ++L+ GE Sbjct: 194 IVADSGKLKMDEGKTFLTLMLHSGE 218 >gi|15964906|ref|NP_385259.1| hypothetical protein SMc00583 [Sinorhizobium meliloti 1021] gi|307300976|ref|ZP_07580745.1| permease YjgP/YjgQ family protein [Sinorhizobium meliloti BL225C] gi|307317711|ref|ZP_07597149.1| permease YjgP/YjgQ family protein [Sinorhizobium meliloti AK83] gi|15074085|emb|CAC45732.1| Hypothetical, transmembrane protein [Sinorhizobium meliloti 1021] gi|306896473|gb|EFN27221.1| permease YjgP/YjgQ family protein [Sinorhizobium meliloti AK83] gi|306903931|gb|EFN34517.1| permease YjgP/YjgQ family protein [Sinorhizobium meliloti BL225C] Length = 360 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 46/198 (23%), Positives = 85/198 (42%), Gaps = 21/198 (10%) Query: 16 FLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTN 75 FL+ ++FI ++ R++ + T S +L+ + + IPT+L PF Sbjct: 21 FLVGIFALIFIIDFSELTSRMSNLPHYTVSGALLM--TTFRIPTILQQTVPFVALFAAMA 78 Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSA- 134 L S+NR EL++ G S ++P + A+L + + +I P K+ A Sbjct: 79 ALISLNRRYELVVTRAAGISVWQFLRPFVVGALLFGVLAVV---VINPLAAWGTKKAEAL 135 Query: 135 KAQLALTFSYLEENL-FFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ---THKIYYAQ 190 +A+ T S ++ + R Y+ +T+ G V + T+ I++ Sbjct: 136 EAEWGSTRSAAANSIPWLR---------QIYDGTDTIIGARSVQNGGTELINVTVIHFDP 186 Query: 191 SGSIDL--DRQAIILNDG 206 G+I L D ++ L DG Sbjct: 187 QGAITLRQDAKSAKLEDG 204 >gi|293416424|ref|ZP_06659063.1| hypothetical protein ECDG_03180 [Escherichia coli B185] gi|291431780|gb|EFF04763.1| hypothetical protein ECDG_03180 [Escherichia coli B185] Length = 359 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 37/158 (23%), Positives = 69/158 (43%), Gaps = 7/158 (4%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I +TG S RI L+ L IL ++ L Sbjct: 57 LPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALV--ALVAGILWTVSL 114 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF 174 + + + Q+ + A + N+ + + ++ + N G+ Sbjct: 115 GAIDEWVASPLQQQAMQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVE 174 Query: 175 IVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRK 211 I RD + + Y YA+S +I D+ I+ G H+K Sbjct: 175 IFHYRDDLSLESYIYARSATIKDDKMWIL--HGVNHKK 210 >gi|194431684|ref|ZP_03063975.1| putative permease, YjgP/YjgQ family [Shigella dysenteriae 1012] gi|194420040|gb|EDX36118.1| putative permease, YjgP/YjgQ family [Shigella dysenteriae 1012] gi|320180990|gb|EFW55911.1| Permease Ygh-P2, YjgP/YjgQ family [Shigella boydii ATCC 9905] gi|332086635|gb|EGI91775.1| hypothetical protein SB521682_3569 [Shigella boydii 5216-82] gi|332088218|gb|EGI93339.1| hypothetical protein SD15574_3351 [Shigella dysenteriae 155-74] Length = 359 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 19/164 (11%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I +TG S RI L+ A++ I Sbjct: 57 LPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALV------ALVAGILW 110 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEE------NLFFRLDDDLYIKISKYNPNN 168 +S I+ S ++Q Q+ T + L E N+ + + ++ + N Sbjct: 111 TVSLGAIDEWVASPLQQ--QALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQG 168 Query: 169 TLQGIFIVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRK 211 G+ I RD + + Y YA+S +I+ D+ ++ G H+K Sbjct: 169 QPVGVEIFHYRDDLSLESYIYARSATIEDDKTWVL--HGVNHKK 210 >gi|110643218|ref|YP_670948.1| putative permease [Escherichia coli 536] gi|47155053|emb|CAE85252.1| putative permease [Escherichia coli] gi|110344810|gb|ABG71047.1| putative permease [Escherichia coli 536] Length = 359 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 97/227 (42%), Gaps = 27/227 (11%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I +TG S RI L+ A++ I Sbjct: 57 LPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALV------ALVAGILW 110 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEE------NLFFRLDDDLYIKISKYNPNN 168 +S I+ S ++Q Q+ T + L E N+ + + ++ + N Sbjct: 111 TVSLGAIDEWVASPLQQ--QALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQG 168 Query: 169 TLQGIFIVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRKS-------PISKDISI 220 G+ I RD + + Y +A+S SI+ D+ I+ G H+K S +++ Sbjct: 169 QPVGVEIFHYRDDLSLESYIFARSASIEDDKTWIL--HGVNHKKWLNGKETLETSDNLAW 226 Query: 221 M-KFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLE 266 F S L+ S +T ++ + + +L + +YR L E Sbjct: 227 QSAFTSMDLEELSMPGNTFSVRQLNHYIHYLQETGQPSSDYRLALWE 273 >gi|83816098|ref|YP_446193.1| hypothetical protein SRU_2087 [Salinibacter ruber DSM 13855] gi|83757492|gb|ABC45605.1| membrane protein, putative [Salinibacter ruber DSM 13855] Length = 473 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 37/176 (21%), Positives = 74/176 (42%), Gaps = 10/176 (5%) Query: 46 LNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLF 105 +++++++ Y + ++ + P + + + +I +TG S ++ P L Sbjct: 47 VSVIVELIAYNLAYMVVLAVPMSVLLAALMAFGELAESQYYTVIKSTGISFGQIVWPALV 106 Query: 106 LAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN 165 +A LL + N++ P+ +QL + + L +F+ +D I + Sbjct: 107 VAALLMGGMLYFNNVMLPEANHRARQLWSDIRGKRPGFELRPGIFYEDMEDYSILVQDRP 166 Query: 166 PN-NTLQGIFIVD---SRDTQTHKIYYAQSGSIDLD----RQAIILNDGEVHRKSP 213 P N L + I D RD Q + A+ G I+ R + L +GE+HR P Sbjct: 167 PGTNKLIDVTIYDYTQGRDRQA--VIKAERGVIESSAGGARLTLTLRNGEMHRPLP 220 >gi|285019432|ref|YP_003377143.1| permease [Xanthomonas albilineans GPE PC73] gi|283474650|emb|CBA17149.1| putative yjgp/yjgq family permease protein [Xanthomonas albilineans] Length = 361 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 38/184 (20%), Positives = 80/184 (43%), Gaps = 12/184 (6%) Query: 82 RNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALT 141 R++E+ +I G L++P+L L + + + + + P T QL +A +L Sbjct: 82 RDSEMAVITAIGVGPRRLLRPILMLVVPVVTLVGLCSLWLGPWADRTSDQLVNEANHSLL 141 Query: 142 FSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQA 200 + LE F L D + +S + + T L +F+ +D + + Q G++ + +A Sbjct: 142 MAGLEAGRFTSLPDGSIVYVSTLSGDGTRLSKVFVQRQKDGRLD-VVTGQRGAMFFEGKA 200 Query: 201 ---IILNDGEVHR-KSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNL----SFLLN 252 + L DG +R + P++ D + + + + + K +D L + + + Sbjct: 201 ERYLRLEDG--YRFEGPLAGDGLDYRMMRFANNDVALSERSAARKDDDPALLTTAALIGD 258 Query: 253 PNPN 256 P P Sbjct: 259 PRPQ 262 >gi|255012652|ref|ZP_05284778.1| hypothetical protein B2_02000 [Bacteroides sp. 2_1_7] Length = 641 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 40/185 (21%), Positives = 82/185 (44%), Gaps = 10/185 (5%) Query: 16 FLMS---CLFIVFIAWVIQILQR-INLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAM 71 FLM+ CLFIV ++Q L R I+ + + +L ++ Y ++PM P + Sbjct: 9 FLMTFGICLFIV----LMQFLWRYIDDMVGKGLGIPVLAEMFMYAALFLVPMALPLAILL 64 Query: 72 ETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQ 131 + ++ ELL + + G S I +++P++ + +S+ F +N + P + + Sbjct: 65 ASLMTFGNLGERLELLAMKSAGVSLIHIMRPLIVTLLFVSVGAFFFQNNVMPVVQVKLYT 124 Query: 132 LSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVD-SRDTQTHKIYYA 189 L + + E F++ + + K +P + L+ + I D S ++ A Sbjct: 125 LLYSMRQKSPELDIPEGSFYKDIPGFNVYVKKKDPKDGLLKDVMIYDYSEGFNNARVIVA 184 Query: 190 QSGSI 194 SG + Sbjct: 185 DSGRL 189 >gi|218701754|ref|YP_002409383.1| hypothetical protein ECIAI39_3474 [Escherichia coli IAI39] gi|227887686|ref|ZP_04005491.1| inner membrane protein [Escherichia coli 83972] gi|301019929|ref|ZP_07184064.1| conserved hypothetical protein [Escherichia coli MS 196-1] gi|218371740|emb|CAR19591.1| conserved hypothetical protein; putative membrane protein [Escherichia coli IAI39] gi|227835082|gb|EEJ45548.1| inner membrane protein [Escherichia coli 83972] gi|299882027|gb|EFI90238.1| conserved hypothetical protein [Escherichia coli MS 196-1] gi|307555074|gb|ADN47849.1| putative permease [Escherichia coli ABU 83972] Length = 359 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 19/164 (11%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I +TG S RI L+ A++ I Sbjct: 57 LPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALV------ALVAGILW 110 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEE------NLFFRLDDDLYIKISKYNPNN 168 +S I+ S ++Q Q+ T + L E N+ + + ++ + N Sbjct: 111 TVSLGAIDEWVASPLQQ--QALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQG 168 Query: 169 TLQGIFIVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRK 211 G+ I RD + + Y +A+S SI+ D+ I+ G H+K Sbjct: 169 QPVGVEIFHYRDDLSLESYIFARSASIEDDKTWIL--HGVNHKK 210 >gi|194436708|ref|ZP_03068808.1| putative permease, YjgP/YjgQ family [Escherichia coli 101-1] gi|256024435|ref|ZP_05438300.1| hypothetical protein E4_13754 [Escherichia sp. 4_1_40B] gi|194424190|gb|EDX40177.1| putative permease, YjgP/YjgQ family [Escherichia coli 101-1] Length = 359 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 19/164 (11%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I +TG S RI L+ A++ I Sbjct: 57 LPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALV------ALVAGILW 110 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEE------NLFFRLDDDLYIKISKYNPNN 168 +S I+ S ++Q Q+ T + L E N+ + + ++ + N Sbjct: 111 TVSLGAIDEWVASPLQQ--QALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQG 168 Query: 169 TLQGIFIVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRK 211 G+ I RD + + Y +A+S SI+ D+ I+ G H+K Sbjct: 169 QPVGVEIFHYRDDLSLESYIFARSASIEDDKTWIL--HGVNHKK 210 >gi|253702061|ref|YP_003023250.1| permease YjgP/YjgQ family protein [Geobacter sp. M21] gi|251776911|gb|ACT19492.1| permease YjgP/YjgQ family protein [Geobacter sp. M21] Length = 360 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 58/280 (20%), Positives = 119/280 (42%), Gaps = 26/280 (9%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 IP ++ P M T L +++ +EL I + G S + P+L +++L+S+ + Sbjct: 57 IPEMIIDAAPLAVLMATLLTLGTLSLTSELTAIRSCGVSLFRISLPILVISVLMSLGVLA 116 Query: 117 SENIIEPKC---RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQG 172 + PK R+ I+++ + + A F + ++N++FR ++ ++ S + P N L+G Sbjct: 117 IGEFVLPKSFAQRTYIQEVLIQKKSASAF-FRQQNIWFR-EEGTVLRASLFEPARNELKG 174 Query: 173 IFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVH--RKSPISKDISIMKFKSYTLQT 230 I + D + + ++ L + +L D V R +S + K++ +Q Sbjct: 175 ITLWDLQPGTGEPLKRTEADLALLGPKGWVLRDAVVRQFRDGEVS---ATQKYRELPVQL 231 Query: 231 ESANSSTIVLKANDQNLSFL-LN---PNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFG 286 + + L ++S + LN Y P Y ++ H R++ + Sbjct: 232 QLKPADLKTLGKYSDSMSLVELNRYCRKLRASGYDP---TRYVTQMHSRISMPFGCAVMA 288 Query: 287 LISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYII 326 + I A + + I + +S GV GF Y+I Sbjct: 289 FLGIPFALRGG------RSSGIAFGVGLSIGV--GFLYVI 320 >gi|219871563|ref|YP_002475938.1| permease [Haemophilus parasuis SH0165] gi|219691767|gb|ACL32990.1| permease, inner membrane protein yjgP [Haemophilus parasuis SH0165] Length = 366 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 47/226 (20%), Positives = 94/226 (41%), Gaps = 11/226 (4%) Query: 10 RCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTES----LNILLKISGYLIPTVLPMVT 65 R + + S + I+FI VI Q++ V SS S +++L + G +PT+ ++ Sbjct: 5 RYLTKEIFKSQIAILFILLVIFFCQQLVRVLSSAVSGKVPTDLVLSLLGLGMPTMAQLML 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + L +E+ ++ G + L+K LFL+I + + + P Sbjct: 65 PLSLFIALLLTLGRFYAESEITVMRACGVGQSLLVKAALFLSIFTTAVAVYNVFWLTPWA 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHK 185 + ++ A+A+ F+ L F Y+ +NT+ I++ + +K Sbjct: 125 INKQSEMLAEAKANPRFAALAAGQFMSAGG--YVLFIDNIKDNTINDIYVFQPEQQKKNK 182 Query: 186 --IYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSY 226 + A+SG + Q + L + + +P + D I F +Y Sbjct: 183 PSVVVAKSGELQGLPNGDQMLNLTNSTRYEGTPQTADFRISHFDNY 228 >gi|293406596|ref|ZP_06650522.1| predicted protein [Escherichia coli FVEC1412] gi|298382335|ref|ZP_06991932.1| predicted protein [Escherichia coli FVEC1302] gi|291426602|gb|EFE99634.1| predicted protein [Escherichia coli FVEC1412] gi|298277475|gb|EFI18991.1| predicted protein [Escherichia coli FVEC1302] Length = 342 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 37/158 (23%), Positives = 70/158 (44%), Gaps = 7/158 (4%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I +TG S RI L+ L IL ++ L Sbjct: 84 LPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALV--ALVAGILWTVSL 141 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF 174 + + + Q+ + A + N+ + + ++ + N G+ Sbjct: 142 GAIDEWVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVE 201 Query: 175 IVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRK 211 I RD + + Y YA+S +I+ D+ I+ G H+K Sbjct: 202 IFHYRDDLSLESYIYARSATIEDDKTWIL--HGVNHKK 237 >gi|160887737|ref|ZP_02068740.1| hypothetical protein BACUNI_00139 [Bacteroides uniformis ATCC 8492] gi|317478670|ref|ZP_07937825.1| hypothetical protein HMPREF1007_00941 [Bacteroides sp. 4_1_36] gi|156862768|gb|EDO56199.1| hypothetical protein BACUNI_00139 [Bacteroides uniformis ATCC 8492] gi|316905181|gb|EFV26980.1| hypothetical protein HMPREF1007_00941 [Bacteroides sp. 4_1_36] Length = 633 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 65/353 (18%), Positives = 143/353 (40%), Gaps = 33/353 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQR-INLVSSSTESLNILLKISGYLIPT 59 +K ++++L+ F M FI +++Q L R ++ + + +L + Y + Sbjct: 4 IKKLDIFVLKSFCMLF-MGTFFICLFIFMMQFLWRYVDEMVGKGLEMTVLAQFFFYSALS 62 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++P P + + ELL + G S + +++P++ + F +N Sbjct: 63 LVPASLPLAILLAALITFGNFGERFELLAMKAAGISLLKIMRPLIIFICFICCVSFYFQN 122 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD--DLYIKISKYNPNNTLQGIFIVD 177 +I PK ++ + L + + E +F+ D +LY+K K L + I + Sbjct: 123 VIGPKAQTKLWTLLISMKQKSPEVDIPEGVFYDEIDGYNLYVK-HKNRKTGMLYDVLIYN 181 Query: 178 -SRDTQTHKIYYAQSGSIDL--DRQAIILN--DGEV---------------HRKSPISKD 217 + + +I + SG +++ D+Q + L+ GE +R+ + Sbjct: 182 FEKGFENAQIIKSDSGRLEMTADKQHLYLHLYSGEQFENLKSQNMNQRNVPYRRETFREK 241 Query: 218 ISIMKFKS------YTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYR-- 269 +I++F S + + +NS + + D + L N + Y+ + TY+ Sbjct: 242 HAIIEFNSDFNMVDAGIMSNQSNSKDMRMLQADIDSMKLQNDSVGRGYYKEAMAGTYKVT 301 Query: 270 SEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGF 322 + K T + G ++ + A + Q++K+ +S + S G W F Sbjct: 302 ASLSKEDTLKIEKAYLGEYNVDSLYNVATLMQKQKVISTAVSRAESAGSDWSF 354 >gi|301325677|ref|ZP_07219138.1| conserved hypothetical protein [Escherichia coli MS 78-1] gi|300847532|gb|EFK75292.1| conserved hypothetical protein [Escherichia coli MS 78-1] Length = 359 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 19/164 (11%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L + +N+EL I +TG S RI L+ A++ I Sbjct: 57 LPRTLVELSPFIALLGGIVGLGQLAKNSELTAIRSTGFSIFRIALV------ALVAGILW 110 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEE------NLFFRLDDDLYIKISKYNPNN 168 +S I+ S ++Q Q+ T + L E N+ + + ++ + N Sbjct: 111 TVSLGAIDEWVASPLQQ--QALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQG 168 Query: 169 TLQGIFIVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRK 211 G+ I RD + + Y YA+S +I+ D+ I+ G H+K Sbjct: 169 QPVGVEIFHYRDDLSLESYIYARSATIEDDKTWIL--HGVNHKK 210 >gi|167752154|ref|ZP_02424281.1| hypothetical protein ALIPUT_00396 [Alistipes putredinis DSM 17216] gi|167660395|gb|EDS04525.1| hypothetical protein ALIPUT_00396 [Alistipes putredinis DSM 17216] Length = 492 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 51/239 (21%), Positives = 107/239 (44%), Gaps = 12/239 (5%) Query: 20 CLFIVFIAWVIQILQR-INLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLT 78 FI+ ++ +L R I+ + ++++ Y ++PM P + + Sbjct: 19 TFFIIMFVLMMNVLWRYIDELVGKGLDPGTIIELLCYATINMIPMALPLATLLAAIMTMG 78 Query: 79 SMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIF-LFISENIIEPKCRSTIKQLSAKAQ 137 ++ N ELL + + G S +++P+L + +L++ FI+ N++ + + + Q Sbjct: 79 NLGENYELLAMKSAGMSLPKIMRPLLVVVSILAVGSFFIANNLVPYANKKFFRTIYDIRQ 138 Query: 138 LALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSRDTQTH-KIYYAQSGSID 195 + T + ++ LFF D + I++ N L + I D+R+ + A SG I Sbjct: 139 MNQTLEF-QDGLFFNGIDGMSIRVGHQNQETGLLTDVLIYDNRNASGNMTTTVADSGYIR 197 Query: 196 L--DRQ--AIILNDGEVH---RKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNL 247 L D++ I L +GE + R S + S ++ + LQ + + S ++ D +L Sbjct: 198 LSDDKRFLEITLFNGERYEQTRNSSQWYNKSSLQRNKFELQKANISISGFEMQRTDADL 256 >gi|194426241|ref|ZP_03058796.1| putative permease, YjgP/YjgQ family [Escherichia coli B171] gi|194415549|gb|EDX31816.1| putative permease, YjgP/YjgQ family [Escherichia coli B171] gi|195183222|dbj|BAG66767.1| putative permease [Escherichia coli O111:H-] Length = 285 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 37/158 (23%), Positives = 70/158 (44%), Gaps = 7/158 (4%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I +TG S RI L+ L IL ++ L Sbjct: 57 LPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALV--ALVAGILWTVSL 114 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF 174 + + + Q+ + A + N+ + + ++ + N G+ Sbjct: 115 GAIDEWVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVE 174 Query: 175 IVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRK 211 I RD + + Y YA+S +I+ D+ I+ G H+K Sbjct: 175 IFHYRDDLSLESYIYARSATIEDDKTWIL--HGVNHKK 210 >gi|262382624|ref|ZP_06075761.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262295502|gb|EEY83433.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 658 Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust. Identities = 40/185 (21%), Positives = 82/185 (44%), Gaps = 10/185 (5%) Query: 16 FLMS---CLFIVFIAWVIQILQR-INLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAM 71 FLM+ CLFIV ++Q L R I+ + + +L ++ Y ++PM P + Sbjct: 19 FLMTFGICLFIV----LMQFLWRYIDDMVGKGLGIPVLAEMFMYAALFLVPMALPLAILL 74 Query: 72 ETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQ 131 + ++ ELL + + G S I +++P++ + +S+ F +N + P + + Sbjct: 75 ASLMTFGNLGERLELLAMKSAGVSLIHIMRPLIVTLLFVSVGAFFFQNNVMPVVQVKLYT 134 Query: 132 LSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVD-SRDTQTHKIYYA 189 L + + E F++ + + K +P + L+ + I D S ++ A Sbjct: 135 LLYSMRQKSPELDIPEGSFYKDIPGFNVYVKKKDPKDGLLKDVMIYDYSEGFNNARVIVA 194 Query: 190 QSGSI 194 SG + Sbjct: 195 DSGRL 199 >gi|325267813|ref|ZP_08134463.1| YjgP/YjgQ family permease [Kingella denitrificans ATCC 33394] gi|324980694|gb|EGC16356.1| YjgP/YjgQ family permease [Kingella denitrificans ATCC 33394] Length = 374 Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust. Identities = 37/174 (21%), Positives = 81/174 (46%), Gaps = 17/174 (9%) Query: 71 METTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP----KCR 126 + T VLT R++E+ I ++G +KPV+ A+ L + + + + + P + R Sbjct: 70 ISTLTVLTRYWRDSEMAIWLSSGLGLRQWVKPVMTFALPLMLLIAVLQIFVLPWAELRSR 129 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRL---DDDLYIKISKYNPN-NTLQGIFIVDSRDTQ 182 + L K L+L +E+ F L + +Y + +++ + L +F+ + D Sbjct: 130 EYAELLKQKQNLSL----VEQGKFTELGKKNGRIYF-VEQFDAHAGQLNHLFLREIGDDG 184 Query: 183 THKIYYAQSGSIDLD----RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 +++ +A+SG L+ + ++L++G + + D + FK L T + Sbjct: 185 KNQVIFAESGQFTLEGSDQHRTLVLHNGYRYLGNAGQGDFEQIAFKELRLATNT 238 >gi|78184805|ref|YP_377240.1| permease [Synechococcus sp. CC9902] gi|78169099|gb|ABB26196.1| possible permease [Synechococcus sp. CC9902] Length = 384 Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust. Identities = 21/69 (30%), Positives = 36/69 (52%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 IP+ L + P T + ++ N+EL + + G S I L+ P L L+ILL+ F+ Sbjct: 68 IPSFLVLSLPMATLFATLLAYSKLSSNSELTALRSLGVSTIRLVVPALALSILLTGLTFV 127 Query: 117 SENIIEPKC 125 ++I P+ Sbjct: 128 FNDVIVPRA 136 >gi|294102483|ref|YP_003554341.1| permease YjgP/YjgQ family protein [Aminobacterium colombiense DSM 12261] gi|293617463|gb|ADE57617.1| permease YjgP/YjgQ family protein [Aminobacterium colombiense DSM 12261] Length = 365 Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust. Identities = 41/209 (19%), Positives = 93/209 (44%), Gaps = 10/209 (4%) Query: 7 YILRCIGRSFLMSCLF--IVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 +I + + SF+ + +VF+A + + Q +++ S+ ++L++ Y +P V+ + Sbjct: 10 FIWKEMAGSFVFGVMAFTMVFVAGDL-LFQIASMIIEKGISIGVVLRLFIYSLPEVIILT 68 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P + ++ N+E++ + +G S ++KPV+ ++L+ + I + P Sbjct: 69 LPMACLLSALLTFGKLSTNSEIVALKASGISFQRILKPVIVGSLLVGLSALILNETVVPF 128 Query: 125 CRSTIKQLSAKAQLALTFSYLEENLFFRLDD----DLYIKISKYNP-NNTLQGIFIVDSR 179 + L + S L+E +F R + + I I K P T+ + + + Sbjct: 129 SNRAAENLMRFEVMREKPSVLKEQVFLRDESNGQLNRVIYIEKLQPRKGTMTNVLVQEFE 188 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEV 208 + +I ++G + I +DGEV Sbjct: 189 KGKLKRITVGKTGLWKDGKWWI--DDGEV 215 >gi|149280024|ref|ZP_01886149.1| hypothetical protein PBAL39_24078 [Pedobacter sp. BAL39] gi|149229221|gb|EDM34615.1| hypothetical protein PBAL39_24078 [Pedobacter sp. BAL39] Length = 472 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 43/216 (19%), Positives = 90/216 (41%), Gaps = 4/216 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + +L+ R F ++ ++FI + + + ++ + ++L++ Y Sbjct: 1 MKKIHVLLLKAFIRPFFVTFFIVMFILLMFFLFKYVDDLIGKGFEWYVILELMYYASAAN 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + ++ N EL+ I + G S + P+L L +SI F + Sbjct: 61 VSMALPLSILLSSIMTFGTLGENYELVAIKSAGISLQKAMMPLLVLITCISISSFFFSDY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVD-S 178 + PK L + ++E +F + I++ K + TL + I D + Sbjct: 121 MLPKANLKFGSLLWDIRNKKLSFLIKEGVFNSSIPNYSIRVDKKGADGVTLHNVMIYDHT 180 Query: 179 RDTQTHKIYYAQSGSIDLDRQAII--LNDGEVHRKS 212 + KI A+ G + D + ++ L DG + +S Sbjct: 181 SNNGIAKIIIAKEGKMASDDKYLLLKLKDGVRYEES 216 >gi|306816678|ref|ZP_07450810.1| hypothetical protein ECNC101_08669 [Escherichia coli NC101] gi|331659261|ref|ZP_08360203.1| putative permease [Escherichia coli TA206] gi|305850243|gb|EFM50702.1| hypothetical protein ECNC101_08669 [Escherichia coli NC101] gi|315297644|gb|EFU56921.1| conserved hypothetical protein [Escherichia coli MS 16-3] gi|331053843|gb|EGI25872.1| putative permease [Escherichia coli TA206] Length = 359 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 9/159 (5%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I +TG S RI L+ L IL ++ L Sbjct: 57 LPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALV--ALVAGILWTVSL 114 Query: 115 -FISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI 173 I E + P + ++ S L + L+ R ++ ++ + N G+ Sbjct: 115 GAIDEWVASPLQQQALQIKSTATALGEDNDIIGNMLWARRGNE-FVTVKSLNEQGQPVGV 173 Query: 174 FIVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRK 211 I RD + + Y YA+S +I D+ I+ G H+K Sbjct: 174 EIFHYRDDLSLESYIYARSATIKDDKTWIL--HGVNHKK 210 >gi|24213806|ref|NP_711287.1| hypothetical protein LA_1106 [Leptospira interrogans serovar Lai str. 56601] gi|24194638|gb|AAN48305.1| hypothetical protein LA_1106 [Leptospira interrogans serovar Lai str. 56601] Length = 631 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 26/92 (28%), Positives = 39/92 (42%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YILR I FL+S F + V+ + + I L LL GYL+ LPM Sbjct: 132 LDRYILREIFSPFLVSLAFFTMVYMVLALQKMIGLFVGKGVDPFRLLDYFGYLLANTLPM 191 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTS 95 P M ++ ++E+ I + G S Sbjct: 192 TIPMACLMSGIMAAGRLSGDSEITAIRSAGVS 223 >gi|237736826|ref|ZP_04567307.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817] gi|229420688|gb|EEO35735.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817] Length = 358 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 32/145 (22%), Positives = 69/145 (47%), Gaps = 12/145 (8%) Query: 22 FIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMN 81 FI I ++ +++ N++ ++++ +S YL P +L P + + Sbjct: 25 FIFLIDIIVAMME--NIIVKGISIIDVMRILSFYL-PPILSQTIPMGMFLGIMLTFSKFT 81 Query: 82 RNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALT 141 R +E + G S ++KP+ A +++F+F + I P+ + ++ L+AK Sbjct: 82 RTSEATAMSAVGMSLRDIVKPIFVAACCVTLFIFFLQESIIPRSVAKLQFLTAK------ 135 Query: 142 FSYLEENLFFRLDDDLYI-KISKYN 165 +Y EN F+L + +I ++ +YN Sbjct: 136 IAY--ENPVFQLKEKTFIDEVDEYN 158 >gi|45658408|ref|YP_002494.1| hypothetical protein LIC12569 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45601651|gb|AAS71131.1| conserved hypothetical protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 631 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 26/92 (28%), Positives = 39/92 (42%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YILR I FL+S F + V+ + + I L LL GYL+ LPM Sbjct: 132 LDRYILREIFSPFLVSLAFFTMVYMVLALQKMIGLFVGKGVDPFRLLDYFGYLLANTLPM 191 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTS 95 P M ++ ++E+ I + G S Sbjct: 192 TIPMACLMSGIMAAGRLSGDSEITAIRSAGVS 223 >gi|57167826|ref|ZP_00366966.1| conserved hypothetical integral membrane protein, putative [Campylobacter coli RM2228] gi|57020948|gb|EAL57612.1| conserved hypothetical integral membrane protein, putative [Campylobacter coli RM2228] Length = 341 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 4/119 (3%) Query: 9 LRCIGRSFL---MSCLFIVF-IAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 LR + FL +S F++F I ++ +Q L SS + LLK+ G+++P +L Sbjct: 5 LRYVLNQFLSTNLSIFFVLFTIVSMVFFIQLAKLTSSIEINFADLLKLYGFMLPRILIFT 64 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P F + T L ++R E +++ G S L K L +A L+S + I ++ P Sbjct: 65 LPIAFFIALTLALFRLSRENESIVLFTLGFSPKILAKFFLKIAALVSALMLIIALVMIP 123 >gi|34540406|ref|NP_904885.1| hypothetical protein PG0598 [Porphyromonas gingivalis W83] gi|34396719|gb|AAQ65784.1| hypothetical protein PG_0598 [Porphyromonas gingivalis W83] Length = 651 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 43/205 (20%), Positives = 88/205 (42%), Gaps = 12/205 (5%) Query: 14 RSFLMSCLFIVFIAWVIQILQRI-----NLVSSSTESLNILLKISGYLIPTVLPMVTPFC 68 ++FL L I W + ++Q + ++V ++ IL K+ Y T++PM P Sbjct: 15 QTFLPLLLMTFAICWFVVLMQFLWKYVDDMVGKGLSAI-ILSKMLFYAAMTLVPMALPLG 73 Query: 69 FAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRST 128 + + ++ ELL + + G ++KP+ F + ++ LFI +N + + + Sbjct: 74 VLLASLMTFGNLGERLELLAMKSAGVPLYRIMKPLFFSVVAIACGLFIFQNDLMIQSQVK 133 Query: 129 IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVD-SRDTQTHKI 186 + A+ A + E F+ + ++K + L + I D S+ +I Sbjct: 134 FYTILFSARRATPELEIPEGSFYNGIRGYNLFVAKKDRRTGMLHDMMIYDHSQGFADARI 193 Query: 187 YYAQSGSIDLDRQ----AIILNDGE 207 A SG + +D ++L+ GE Sbjct: 194 IVADSGKLKMDEGKTFLTLMLHSGE 218 >gi|167622904|ref|YP_001673198.1| permease YjgP/YjgQ family protein [Shewanella halifaxensis HAW-EB4] gi|167352926|gb|ABZ75539.1| permease YjgP/YjgQ family protein [Shewanella halifaxensis HAW-EB4] Length = 352 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 38/184 (20%), Positives = 81/184 (44%), Gaps = 3/184 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + YI R + + ++ L + ++ +I+ + ++ LV T ++ +LIP Sbjct: 1 MRILDFYIARTLISTSSLALLVLTGLSGIIKWVDQLRLVGRGTYTMMDAGVYVLFLIPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + + + N+EL+++ + G SR+ + + AI L I + + Sbjct: 61 IELFFPMAVLLGALIGMGMLASNSELVVMQSAGLSRLQITMSAMKTAIPLMIIVMMLTEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENL-FFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P K++ K S ++ N + D DL++ I N L+ I + + Sbjct: 121 VAPVAELRAKEI--KRTNISGGSLIDSNRGIWAKDGDLFVNIGGAADINNLRDITLYEFD 178 Query: 180 DTQT 183 DT T Sbjct: 179 DTTT 182 >gi|269468373|gb|EEZ80038.1| permease [uncultured SUP05 cluster bacterium] Length = 360 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 34/163 (20%), Positives = 74/163 (45%), Gaps = 1/163 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI + + + L + +V I + L+ + + ++ +L L G LIP++ Sbjct: 1 MKILDRYIAKTLLKYSLSVMVVLVGIFAFFKFLEEVGDIGRASYTLFDALAYVGLLIPSI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ + L + N+EL+I+ G S + + K L ++++ + + I Sbjct: 61 VYALSSLIILLGCILGLGYLAGNSELIIMRGAGISVVEITKTTLKVSLVFIVIMIIFGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISK 163 I P K+ A+A S ++ + R D + +I++ K Sbjct: 121 ISPLFSDYAKKYRAQALGESVISSSQQGFWLR-DGNNFIQVDK 162 >gi|218691270|ref|YP_002399482.1| hypothetical protein ECED1_3629 [Escherichia coli ED1a] gi|218428834|emb|CAR09635.1| conserved hypothetical protein; putative membrane protein [Escherichia coli ED1a] Length = 386 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 9/159 (5%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I +TG S RI L+ L IL ++ L Sbjct: 84 LPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALV--ALVAGILWTVSL 141 Query: 115 -FISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI 173 I E + P + ++ S L + L+ R ++ ++ + N G+ Sbjct: 142 GAIDEWVASPLQQQALQIKSTATALGEDNDIIGNMLWARRGNE-FVTVKSLNEQGQPVGV 200 Query: 174 FIVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRK 211 I RD + + Y YA+S +I D+ I+ G H+K Sbjct: 201 EIFHYRDDLSLESYIYARSATIKDDKTWIL--HGVNHKK 237 >gi|117925962|ref|YP_866579.1| permease YjgP/YjgQ family protein [Magnetococcus sp. MC-1] gi|117609718|gb|ABK45173.1| permease YjgP/YjgQ family protein [Magnetococcus sp. MC-1] Length = 392 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 54/271 (19%), Positives = 117/271 (43%), Gaps = 20/271 (7%) Query: 31 QILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIID 90 QIL ++L + + S+++L K+ ++P L P + L + +++EL++I Sbjct: 31 QILMLVDLWVNKSVSVSVLGKMVLLIMPKFLVASLPMALLVGILIGLGRLAQDSELIVIK 90 Query: 91 NTGTSRITLIKPV-LFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENL 149 +G S + + P+ + + ++ + L+++ ++ P + + + TFS ++ Sbjct: 91 ASGISLLRIFYPLSVPIVVVTACSLYLNWFLV-PDSHTLFQNIRVALLSQNTFS-IKTQT 148 Query: 150 FFRLDDDLYIKISKYNPNNT-LQGIFIVDSRDTQTHKIYYAQSGSI---DLDRQAIILND 205 F L I +++ + L+G+ I D RD A+SG + A++L + Sbjct: 149 FNNTIPGLTIYVNRQSHGGKLLEGLLIHDERDPDMPVTVIAKSGMLHRGSTGETALLLKE 208 Query: 206 GEVHRKSPISKDISIMKFKSYTL------QTESANSSTIVLKANDQNLSFLLNPNPNNPN 259 G H+ +P + F +Y L +TES++ + + +L Sbjct: 209 GSRHQMAP-GNAYRRLNFSTYDLELGIAFETESSSGDRAIRSYSIADL------EQARIA 261 Query: 260 YRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 P L E+H+R L ++ G ++I Sbjct: 262 QDPLLASEAEREWHRRFAIPLATLLLGFLAI 292 >gi|126725341|ref|ZP_01741183.1| putative permease [Rhodobacterales bacterium HTCC2150] gi|126704545|gb|EBA03636.1| putative permease [Rhodobacterales bacterium HTCC2150] Length = 365 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 11/209 (5%) Query: 5 ELYILRCIGRSFLMSCLFIVF-IAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 LY R +FLM LF+ F I ++I +++++ SS++ + +++ P L Sbjct: 4 HLYFARKFITNFLM-ILFVFFGIIFLIDMVEQLRRFSSNSVGMKEAAQLALLNAPGNLYR 62 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 + P + T + ++ R +EL+I +G S + + L + L +F N I Sbjct: 63 ILPLLVILSTLALFLNLTRTSELVIARASGRSALGALLAPLLVTFTLGVFGVSVWNPIGA 122 Query: 124 KCRSTIKQLS----AKAQLALTFSYLEENLFFR---LDDDLYIKISKYNPNNTLQGIFIV 176 + + +S +A AL+ E L+ R ++ I ++ N N T+ G Sbjct: 123 ATANLYETISDRHLGRASNALSIG--AEGLWLRQGNVEGQTVIHANETNQNGTILGNVTF 180 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILND 205 + D + IY ++ + L+ +LND Sbjct: 181 LAFDINSQVIYRIEAKTAKLETGGWVLND 209 >gi|89891008|ref|ZP_01202516.1| putative permease, YjgP/YjgQ family [Flavobacteria bacterium BBFL7] gi|89516652|gb|EAS19311.1| putative permease, YjgP/YjgQ family [Flavobacteria bacterium BBFL7] Length = 357 Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust. Identities = 73/338 (21%), Positives = 141/338 (41%), Gaps = 49/338 (14%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS----TESLNILLKISGYL 56 +K + YILR +FL+ + I + I ++I + S TE + LL + Y Sbjct: 2 LKILDRYILRQYLGAFLLLLCLFIPIMITVHIAEKIGKILSKDIPFTEVMMYLLDFTIYF 61 Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 + P+ F F + T + + NTE++ ++G S ++P + A+L+ + + Sbjct: 62 SNFLFPI---FLF-ISTMFFTSKLANNTEIVAFLSSGVSYNRFLRPYIIGAVLVCVTALV 117 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEE-------NLFFRLDDDLYIKISKYNPNNT 169 + P + + F Y + N+F R+ DD Y+ +S YN Sbjct: 118 FSTVFVPDAAAGFNEFQ--------FKYFKSEKERQTNNVFRRISDDDYVYVSNYNSGRK 169 Query: 170 LQGIFIVD--SRDTQTHKIYYAQSGSID----LDR--QAIILNDGEVHRKSPISKDISIM 221 F ++ + + +KIY + D L R + ++ +GE+ + +K +I+ Sbjct: 170 TGYDFTLEHFNGNELEYKIYAERIAFKDSVYTLSRYKKRVLQENGEIL--TTKAKLDTIL 227 Query: 222 KFKSYTLQTESANSSTIVLKANDQNLSFL-LNPNPNNPNYRPELLETYRSEFHKRLTQWL 280 F L S + T+ + + L F+ + N N + Y E HKR + + Sbjct: 228 NFDIDELTPSSYVAETL---SYQKLLDFIETEESRGNGN-----MNVYYVEKHKRTSIPV 279 Query: 281 FPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGV 318 +IF +I++ V KK + ++L+I G+ Sbjct: 280 SALIFTIIAVA-------VSSVKKRGGMGVNLAIGLGI 310 >gi|257454352|ref|ZP_05619615.1| permease YjgP/YjgQ family protein [Enhydrobacter aerosaccus SK60] gi|257448255|gb|EEV23235.1| permease YjgP/YjgQ family protein [Enhydrobacter aerosaccus SK60] Length = 385 Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust. Identities = 36/181 (19%), Positives = 80/181 (44%), Gaps = 2/181 (1%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y+ + + + + LF++ + ++++ + + + +L I GY IPT L ++ P Sbjct: 14 YMTQQVAANTAIVLLFLMALMLGGRLIRYFGIAAEGRLDVGLLFAIIGYNIPTFLELILP 73 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 F + VL M + E+ ++ +G SR L + ++ L L IF + +P Sbjct: 74 LSFFIALMLVLGRMYVDQEMSVLFASGISRGRLTRLMIPLITGLFIFQMGISLLAKPWGL 133 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSRDTQTHK 185 S KQ+ L + F + ++ + ++N L+ +++V + ++ K Sbjct: 134 SNSKQIWQTQSLGSLLDLVRPKTFIS-SGNYHLYVDEFNKEKRELKNLYVVQQQTDKSGK 192 Query: 186 I 186 I Sbjct: 193 I 193 >gi|169656684|ref|YP_001428997.2| putative permease YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|290954454|ref|ZP_06559075.1| putative permease YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica URFT1] gi|295312116|ref|ZP_06802927.1| putative permease YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica URFT1] gi|164551752|gb|ABU62041.2| putative permease YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica FTNF002-00] Length = 353 Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust. Identities = 35/163 (21%), Positives = 71/163 (43%), Gaps = 19/163 (11%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 +P +L + P C + L+ + N+E++++ + G S + K V+ + ++ S+ + Sbjct: 58 LPGILYTLLPACAMVGALMGLSLLANNSEIIVLRSFGRSTAQIAKGVILVGLIGSVTTMV 117 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFI 175 I P + +Q+ +Y +L+F+ D ++ I+ P N GI Sbjct: 118 FGGYIAPILQ---RQVDTN-----MVTYNTHDLWFKTPDG-FMNIANIEPTNGKAYGIRK 168 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILN---------DGEVH 209 +D + +I YA+S + D A + N DG+ H Sbjct: 169 FMVQDNKVREIRYAESATYINDASANVFNIRKIIFPASDGQKH 211 >gi|254369661|ref|ZP_04985671.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica FSC022] gi|157122620|gb|EDO66749.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica FSC022] Length = 353 Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust. Identities = 35/163 (21%), Positives = 71/163 (43%), Gaps = 19/163 (11%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 +P +L + P C + L+ + N+E++++ + G S + K V+ + ++ S+ + Sbjct: 58 LPGILYTLLPACAMVGALMGLSLLANNSEIIVLRSFGRSTAQIAKGVILVGLIGSVTTMV 117 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFI 175 I P + +Q+ +Y +L+F+ D ++ I+ P N GI Sbjct: 118 FGGYIAPILQ---RQVDTN-----MVTYNTHDLWFKTPDG-FMNIANIEPTNGKAYGIRK 168 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILN---------DGEVH 209 +D + +I YA+S + D A + N DG+ H Sbjct: 169 FMVQDNKVREIRYAESATYINDASANVFNIRKIIFPASDGQKH 211 >gi|156935580|ref|YP_001439496.1| hypothetical protein ESA_03444 [Cronobacter sakazakii ATCC BAA-894] gi|156935598|ref|YP_001439514.1| hypothetical protein ESA_03463 [Cronobacter sakazakii ATCC BAA-894] gi|156533834|gb|ABU78660.1| hypothetical protein ESA_03444 [Cronobacter sakazakii ATCC BAA-894] gi|156533852|gb|ABU78678.1| hypothetical protein ESA_03463 [Cronobacter sakazakii ATCC BAA-894] Length = 370 Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust. Identities = 39/200 (19%), Positives = 75/200 (37%), Gaps = 15/200 (7%) Query: 83 NTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTF 142 +E+ ++ G S+ L+K + LA+L I ++ P ++ A+A+ Sbjct: 82 ESEITVMHACGLSKAVLVKAAMVLALLTGIVAAVNVMWAGPWSSRHQDEVLAEAKANPGM 141 Query: 143 SYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHK--IYYAQSGSIDLDR-- 198 + L + F + D + + + +F+ R + + A SG + + Sbjct: 142 AALAQGQFQQATDGNAVLFIESVNGSKFNDVFLAQLRPKGNARPSVVVADSGELSQRKDG 201 Query: 199 -QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNN 257 Q + LN G + + +D I FK Y + A ++ L N Sbjct: 202 SQVVTLNQGTRFEGTAMLRDFRITDFKDYKAIIGHQAVALDPDDAEQMDMKTLWQANS-- 259 Query: 258 PNYRPELLETYRSEFHKRLT 277 ++ R+EFH RLT Sbjct: 260 --------KSARAEFHWRLT 271 >gi|33519519|ref|NP_878351.1| putative inner membrane protein [Candidatus Blochmannia floridanus] gi|33517182|emb|CAD83564.1| putative inner membrane protein; predicted permease [Candidatus Blochmannia floridanus] Length = 370 Score = 37.7 bits (86), Expect = 3.1, Method: Compositional matrix adjust. Identities = 37/163 (22%), Positives = 67/163 (41%), Gaps = 10/163 (6%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 IP + ++ PF + ++ + E+L + + ++ LI+ + + +++I I Sbjct: 54 IPDLGKLIIPFSLFLSVLISCYRLHMHNEILAMYSCAVNKYVLIQSICMYSTVIAILSLI 113 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI- 175 + + P C + + K + F L E F+ L D+ + N L +FI Sbjct: 114 NLAYLAPHCEQYKENIFFKMKKNTYFIELIEKKFYLLFDEHLVLFIDNIKNGMLNHVFIL 173 Query: 176 --VDSRDTQTHKIYYAQSGSIDLD----RQAIILNDG---EVH 209 V + D I A GSI + Q IIL G E+H Sbjct: 174 KRVQNIDKNVFSIITADQGSIHYNFNDKSQLIILQSGMYYEIH 216 >gi|323188591|gb|EFZ73876.1| hypothetical protein ECRN5871_3010 [Escherichia coli RN587/1] Length = 359 Score = 37.7 bits (86), Expect = 3.1, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 19/164 (11%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I +TG S RI L+ A++ I Sbjct: 57 LPRTLVELSPFIALLGGIVGLEQLSKNSELTAIRSTGFSIFRIALV------ALVAGILW 110 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEE------NLFFRLDDDLYIKISKYNPNN 168 +S I+ S ++Q Q+ T + L E N+ + + ++ + N Sbjct: 111 TVSLGAIDEWVASPLQQ--QALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQG 168 Query: 169 TLQGIFIVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRK 211 G+ I RD + + Y YA+S +I D+ I+ G H+K Sbjct: 169 QPVGVEIFHYRDDLSLESYIYARSATIKDDKTWIL--HGVNHKK 210 >gi|254456522|ref|ZP_05069951.1| putative permease, YjgP/YjgQ family [Candidatus Pelagibacter sp. HTCC7211] gi|207083524|gb|EDZ60950.1| putative permease, YjgP/YjgQ family [Candidatus Pelagibacter sp. HTCC7211] Length = 362 Score = 37.7 bits (86), Expect = 3.1, Method: Compositional matrix adjust. Identities = 33/177 (18%), Positives = 75/177 (42%) Query: 16 FLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTN 75 FL++ + + WV Q + ++++ S ++ + S P ++ + PF Sbjct: 4 FLIALISAGIVIWVFQAVNFLDIMIEDGRSYSVYISYSLLNFPKIINKLFPFILFFSLFY 63 Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAK 135 V N EL+I N G ++I LI + +++L + I II PK + + Sbjct: 64 VTIKYENNNELIIFWNFGINKIQLINFIFKFSVILMLIQLIFSAIIVPKSQDLARSFLRS 123 Query: 136 AQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSG 192 + + ++++ F ++ I + + + L +++ + +I YA+ G Sbjct: 124 STVNFYENFIKPKRFNDTIKNVTIFSERKDIDGNLYNLYLKKEINENNFQITYAKKG 180 >gi|94495767|ref|ZP_01302347.1| permease YjgP/YjgQ [Sphingomonas sp. SKA58] gi|94425155|gb|EAT10176.1| permease YjgP/YjgQ [Sphingomonas sp. SKA58] Length = 366 Score = 37.7 bits (86), Expect = 3.1, Method: Compositional matrix adjust. Identities = 33/136 (24%), Positives = 66/136 (48%), Gaps = 19/136 (13%) Query: 2 KSFELYILRC-IGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNI-------LLKIS 53 + LY+ R + R+F + + +V +LQ ++L+ +S + L L Sbjct: 9 RQISLYMARLFLTRTFAVLAMLVV-------VLQTLDLLGNSGDILAYPGNSDAQLWHYV 61 Query: 54 GYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIF 113 G P ++ PF + T +L ++N+N+E++ + G S ++ P++ A+ +SI Sbjct: 62 GLRAPQIIATFLPFSVLLGTLVMLATLNQNSEIISMKAAGLSAHQILAPLVLAALGVSII 121 Query: 114 LFI-SENIIEPKCRST 128 F+ +E I+ RST Sbjct: 122 SFVFNERIV---VRST 134 >gi|56708377|ref|YP_170273.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis SCHU S4] gi|89256770|ref|YP_514132.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica LVS] gi|110670847|ref|YP_667404.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis FSC198] gi|115315161|ref|YP_763884.1| hypothetical protein FTH_1435 [Francisella tularensis subsp. holarctica OSU18] gi|167010911|ref|ZP_02275842.1| hypothetical protein Ftulh_09398 [Francisella tularensis subsp. holarctica FSC200] gi|187931970|ref|YP_001891955.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. mediasiatica FSC147] gi|224457507|ref|ZP_03665980.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis MA00-2987] gi|254371000|ref|ZP_04987003.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis FSC033] gi|254875200|ref|ZP_05247910.1| permease yjgP/yjgQ family protein [Francisella tularensis subsp. tularensis MA00-2987] gi|56604869|emb|CAG45953.1| Permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis SCHU S4] gi|89144601|emb|CAJ79920.1| Permease YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica LVS] gi|110321180|emb|CAL09336.1| Permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis FSC198] gi|115130060|gb|ABI83247.1| conserved hypothetical protein [Francisella tularensis subsp. holarctica OSU18] gi|151569241|gb|EDN34895.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis FSC033] gi|187712879|gb|ACD31176.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. mediasiatica FSC147] gi|254841199|gb|EET19635.1| permease yjgP/yjgQ family protein [Francisella tularensis subsp. tularensis MA00-2987] gi|282159996|gb|ADA79387.1| hypothetical protein NE061598_09765 [Francisella tularensis subsp. tularensis NE061598] Length = 353 Score = 37.7 bits (86), Expect = 3.1, Method: Compositional matrix adjust. Identities = 35/163 (21%), Positives = 71/163 (43%), Gaps = 19/163 (11%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 +P +L + P C + L+ + N+E++++ + G S + K V+ + ++ S+ + Sbjct: 58 LPGILYTLLPACAMVGALMGLSLLANNSEIIVLRSFGRSTAQIAKGVILVGLIGSVTTMV 117 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFI 175 I P + +Q+ +Y +L+F+ D ++ I+ P N GI Sbjct: 118 FGGYIAPILQ---RQVDTN-----MVTYNTHDLWFKTPDG-FMNIANIEPTNGKAYGIRK 168 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILN---------DGEVH 209 +D + +I YA+S + D A + N DG+ H Sbjct: 169 FMVQDNKVREIRYAESATYINDASANVFNIRKIIFPASDGQKH 211 >gi|117625285|ref|YP_854457.1| putative permease [Escherichia coli APEC O1] gi|115514409|gb|ABJ02484.1| putative permease [Escherichia coli APEC O1] gi|294491111|gb|ADE89867.1| putative permease, YjgP/YjgQ family [Escherichia coli IHE3034] gi|307625417|gb|ADN69721.1| hypothetical protein UM146_01460 [Escherichia coli UM146] gi|315288788|gb|EFU48186.1| conserved hypothetical protein [Escherichia coli MS 110-3] gi|323951498|gb|EGB47373.1| YjgP/YjgQ permease [Escherichia coli H252] gi|323957870|gb|EGB53584.1| YjgP/YjgQ permease [Escherichia coli H263] Length = 359 Score = 37.7 bits (86), Expect = 3.1, Method: Compositional matrix adjust. Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 17/155 (10%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I +TG S RI L+ A++ I Sbjct: 57 LPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALV------ALVAGILW 110 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEE------NLFFRLDDDLYIKISKYNPNN 168 +S I+ S ++Q Q+ T + L E N+ + + ++ + N Sbjct: 111 TVSLGAIDEWVASPLQQ--QALQIKSTATALGEDNDIIGNMLWARRGNEFVTVKSLNEQG 168 Query: 169 TLQGIFIVDSRDTQTHKIY-YAQSGSIDLDRQAII 202 G+ I RD + + Y YA+S +I+ D+ I+ Sbjct: 169 QPVGVEIFHYRDDLSLESYIYARSATIEDDKTWIL 203 >gi|218555553|ref|YP_002388466.1| hypothetical protein ECIAI1_3128 [Escherichia coli IAI1] gi|218362321|emb|CAQ99943.1| conserved hypothetical protein; putative membrane protein [Escherichia coli IAI1] Length = 386 Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 19/164 (11%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I +TG S RI L+ A++ I Sbjct: 84 LPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALV------ALVAGILW 137 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEE------NLFFRLDDDLYIKISKYNPNN 168 +S I+ S ++Q + Q+ T + L E N+ + + ++ + N Sbjct: 138 TVSLGAIDEWVASPLQQQA--LQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQG 195 Query: 169 TLQGIFIVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRK 211 G+ I RD + + Y YA+S +I D+ I+ G H+K Sbjct: 196 QPVGVEIFHYRDDLSLESYIYARSATIKDDKTWIL--HGVNHKK 237 >gi|157162459|ref|YP_001459777.1| YjgP/YjgQ permease [Escherichia coli HS] gi|188495921|ref|ZP_03003191.1| putative permease, YjgP/YjgQ family [Escherichia coli 53638] gi|209920455|ref|YP_002294539.1| hypothetical protein ECSE_3264 [Escherichia coli SE11] gi|300815539|ref|ZP_07095763.1| conserved hypothetical protein [Escherichia coli MS 107-1] gi|157068139|gb|ABV07394.1| putative permease, YjgP/YjgQ family [Escherichia coli HS] gi|188491120|gb|EDU66223.1| putative permease, YjgP/YjgQ family [Escherichia coli 53638] gi|209913714|dbj|BAG78788.1| conserved hypothetical protein [Escherichia coli SE11] gi|300531468|gb|EFK52530.1| conserved hypothetical protein [Escherichia coli MS 107-1] gi|320201893|gb|EFW76468.1| Permease Ygh-P2, YjgP/YjgQ family [Escherichia coli EC4100B] gi|323183568|gb|EFZ68965.1| hypothetical protein ECOK1357_3348 [Escherichia coli 1357] gi|323946694|gb|EGB42715.1| YjgP/YjgQ permease [Escherichia coli H120] gi|324018178|gb|EGB87397.1| hypothetical protein HMPREF9542_03233 [Escherichia coli MS 117-3] gi|324119791|gb|EGC13671.1| YjgP/YjgQ permease [Escherichia coli E1167] Length = 359 Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 19/164 (11%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I +TG S RI L+ A++ I Sbjct: 57 LPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALV------ALVAGILW 110 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEE------NLFFRLDDDLYIKISKYNPNN 168 +S I+ S ++Q Q+ T + L E N+ + + ++ + N Sbjct: 111 TVSLGAIDEWVASPLQQ--QALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQG 168 Query: 169 TLQGIFIVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRK 211 G+ I RD + + Y YA+S +I D+ I+ G H+K Sbjct: 169 QPVGVEIFHYRDDLSLESYIYARSATIKDDKTWIL--HGVNHKK 210 >gi|307310386|ref|ZP_07590034.1| permease YjgP/YjgQ family protein [Escherichia coli W] gi|306909281|gb|EFN39776.1| permease YjgP/YjgQ family protein [Escherichia coli W] gi|315062298|gb|ADT76625.1| permease YjgP/YjgQ family protein [Escherichia coli W] gi|323377117|gb|ADX49385.1| permease YjgP/YjgQ family protein [Escherichia coli KO11] Length = 359 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 19/164 (11%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I +TG S RI L+ A++ I Sbjct: 57 LPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALV------ALVAGILW 110 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEE------NLFFRLDDDLYIKISKYNPNN 168 +S I+ S ++Q Q+ T + L E N+ + + ++ + N Sbjct: 111 TVSLGAIDEWVASPLQQ--QALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQG 168 Query: 169 TLQGIFIVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRK 211 G+ I RD + + Y YA+S +I D+ I+ G H+K Sbjct: 169 QPVGVEIFHYRDDLSLESYIYARSATIKDDKTWIL--HGVNHKK 210 >gi|54113817|gb|AAV29542.1| NT02FT0415 [synthetic construct] Length = 353 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 35/163 (21%), Positives = 71/163 (43%), Gaps = 19/163 (11%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 +P +L + P C + L+ + N+E++++ + G S + K V+ + ++ S+ + Sbjct: 58 LPGILYTLLPACAMVGALMGLSLLANNSEIIVLRSFGRSTAQIAKGVILVGLIGSVTTMV 117 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFI 175 I P + +Q+ +Y +L+F+ D ++ I+ P N GI Sbjct: 118 FGGYIAPILQ---RQVDTN-----MVTYNTHDLWFKTPDG-FMNIANIEPTNGKAYGIRK 168 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILN---------DGEVH 209 +D + +I YA+S + D A + N DG+ H Sbjct: 169 FMVQDNKVREIRYAESATYINDASANVFNIRKIIFPASDGQKH 211 >gi|91212393|ref|YP_542379.1| hypothetical protein UTI89_C3401 [Escherichia coli UTI89] gi|218560054|ref|YP_002392967.1| hypothetical protein ECS88_3361 [Escherichia coli S88] gi|237706274|ref|ZP_04536755.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|91073967|gb|ABE08848.1| hypothetical protein UTI89_C3401 [Escherichia coli UTI89] gi|218366823|emb|CAR04593.1| conserved hypothetical protein; putative membrane protein [Escherichia coli S88] gi|226899314|gb|EEH85573.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] Length = 386 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 7/150 (4%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I +TG S RI L+ L IL ++ L Sbjct: 84 LPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALV--ALVAGILWTVSL 141 Query: 115 -FISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI 173 I E + P + ++ S L + L+ R ++ ++ + N G+ Sbjct: 142 GAIDEWVASPLQQQALQIKSTATALGEDNDIIGNMLWARRGNE-FVTVKSLNEQGQPVGV 200 Query: 174 FIVDSRDTQTHKIY-YAQSGSIDLDRQAII 202 I RD + + Y YA+S +I+ D+ I+ Sbjct: 201 EIFHYRDDLSLESYIYARSATIEDDKTWIL 230 >gi|13476525|ref|NP_108095.1| hypothetical protein mll7865 [Mesorhizobium loti MAFF303099] gi|14027286|dbj|BAB54240.1| mll7865 [Mesorhizobium loti MAFF303099] Length = 360 Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust. Identities = 29/108 (26%), Positives = 46/108 (42%), Gaps = 5/108 (4%) Query: 16 FLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTN 75 F + L +VF+ ++ R + T + ISG +P ++ PF Sbjct: 20 FFLGLLALVFLIDFTELSGRTTGLPGFTYGTAV--AISGLRMPMIMLQTVPFVGLFSAMA 77 Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 L S+NR EL+I + G S + P A+L F F+S +I P Sbjct: 78 TLVSLNRRYELVIARSAGVSAWQFLLPCCIGALL---FGFVSVGLINP 122 >gi|324005416|gb|EGB74635.1| hypothetical protein HMPREF9532_04926 [Escherichia coli MS 57-2] Length = 359 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 17/155 (10%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I +TG S RI L+ A++ I Sbjct: 57 LPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALV------ALVAGILW 110 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEE------NLFFRLDDDLYIKISKYNPNN 168 +S I+ S ++Q Q+ T + L E N+ + + ++ + N Sbjct: 111 TVSLGAIDEWGASPLQQ--QALQIKSTATALGEDNDIIGNMLWARRGNEFVTVKSLNEQG 168 Query: 169 TLQGIFIVDSRDTQTHKIY-YAQSGSIDLDRQAII 202 G+ I RD + + Y YA+S +I+ D+ I+ Sbjct: 169 QPVGVEIFHYRDDLSLESYIYARSATIEDDKTWIL 203 >gi|260596296|ref|YP_003208867.1| lipopolysaccharide ABC transporter permease LptF [Cronobacter turicensis z3032] gi|260215473|emb|CBA27590.1| Lipopolysaccharide export system permease protein lptF [Cronobacter turicensis z3032] Length = 370 Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust. Identities = 38/200 (19%), Positives = 76/200 (38%), Gaps = 15/200 (7%) Query: 83 NTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTF 142 +E+ ++ G S+ L+K + LA+L I ++ P ++ A+A+ Sbjct: 82 ESEITVMHACGLSKAVLVKAAMVLALLTGIIAAVNVMWAGPWSSRHQDEVLAEAKANPGM 141 Query: 143 SYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHK--IYYAQSGSIDLDR-- 198 + L + F + D + + + + +F+ R + + A SG + + Sbjct: 142 AALAQGQFQQATDGNAVLFIESVDGSKFKDVFLAQLRPKGNARPSVVVADSGELSQRKDG 201 Query: 199 -QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNN 257 Q + LN G + + +D I FK Y + A ++ L + Sbjct: 202 SQVVTLNQGTRFEGTAMLRDFRITDFKDYQAIIGHQAVALDPDDAEQMDMQTLWQADS-- 259 Query: 258 PNYRPELLETYRSEFHKRLT 277 ++ R+EFH RLT Sbjct: 260 --------KSARAEFHWRLT 271 >gi|157155522|ref|YP_001464443.1| YjgP/YjgQ permease [Escherichia coli E24377A] gi|193067447|ref|ZP_03048415.1| putative permease, YjgP/YjgQ family [Escherichia coli E110019] gi|260869741|ref|YP_003236143.1| hypothetical protein ECO111_3808 [Escherichia coli O111:H- str. 11128] gi|157077552|gb|ABV17260.1| putative permease, YjgP/YjgQ family [Escherichia coli E24377A] gi|192959404|gb|EDV89839.1| putative permease, YjgP/YjgQ family [Escherichia coli E110019] gi|257766097|dbj|BAI37592.1| conserved predicted membrane protein [Escherichia coli O111:H- str. 11128] gi|323178688|gb|EFZ64264.1| hypothetical protein ECOK1180_2420 [Escherichia coli 1180] Length = 359 Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 73/164 (44%), Gaps = 19/164 (11%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I +TG S RI L+ A++ I Sbjct: 57 LPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALV------ALVAGILW 110 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEE------NLFFRLDDDLYIKISKYNPNN 168 +S I+ S ++Q Q+ T + L E N+ + + ++ + N Sbjct: 111 TVSLGAIDEWVASPLQQ--QALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQG 168 Query: 169 TLQGIFIVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRK 211 G+ I RD + + Y YA+S +I D+ ++ G H+K Sbjct: 169 QPVGVEIFHYRDDLSLESYIYARSATIKDDKTWVL--HGVNHKK 210 >gi|326796829|ref|YP_004314649.1| permease YjgP/YjgQ family protein [Marinomonas mediterranea MMB-1] gi|326547593|gb|ADZ92813.1| permease YjgP/YjgQ family protein [Marinomonas mediterranea MMB-1] Length = 369 Score = 37.4 bits (85), Expect = 3.9, Method: Compositional matrix adjust. Identities = 57/244 (23%), Positives = 102/244 (41%), Gaps = 22/244 (9%) Query: 36 INLVSSSTE---SLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNT 92 +N + + E S L I G+ +P+ + M+ P F + + E+ I+ ++ Sbjct: 32 VNYLGRAAEGKMSFEFLFIILGFHVPSFIQMILPLAFFLSLLLAYGRLYIENEMSILFSS 91 Query: 93 GTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALT-FSYLEENLF- 150 G S++ L L +A LL++ + P +L+ + Q LT F +++ F Sbjct: 92 GISKVKLTVYTLGIAGLLTLTSAFVNFWLSPYSEYQ-AELARQEQDQLTAFDFIQPGRFQ 150 Query: 151 FRLDDDLYIKISKYNPNNT-LQGIFIVD-----SRDTQTHKIYYAQSGSIDLDRQA---- 200 R Y+ + + P + IF+ D RD I + I L+ + Sbjct: 151 GRGQQTTYV--ASFTPEEGWMNNIFLSDFVRKNGRDIPVQTIA-KNAEQIRLETEGGLNY 207 Query: 201 IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNY 260 +I DG + +P + + IM+F +Y ++ E TI KA + L N +NP Y Sbjct: 208 LIFKDGVRYEGTPGAANYRIMEFDTYAIRLEDKAPGTID-KAYAVPTTALF--NSDNPKY 264 Query: 261 RPEL 264 EL Sbjct: 265 IAEL 268 >gi|297620917|ref|YP_003709054.1| putative permease, YjgP/YjgQ family [Waddlia chondrophila WSU 86-1044] gi|297376218|gb|ADI38048.1| putative permease, YjgP/YjgQ family [Waddlia chondrophila WSU 86-1044] Length = 359 Score = 37.4 bits (85), Expect = 3.9, Method: Compositional matrix adjust. Identities = 15/76 (19%), Positives = 39/76 (51%) Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ PF + T L +N + EL+ + +G S +++P +FL +L ++ ++ + + Sbjct: 66 VLVPFALMIATIRTLCDLNIHNELVALQASGISLKKILRPFIFLGLLFTLLIYANTEFLL 125 Query: 123 PKCRSTIKQLSAKAQL 138 P + + L + ++ Sbjct: 126 PNAMAASRHLRNQKEI 141 >gi|224368911|ref|YP_002603073.1| predicted permease family protein [Desulfobacterium autotrophicum HRM2] gi|223691628|gb|ACN14911.1| predicted permease family protein [Desulfobacterium autotrophicum HRM2] Length = 391 Score = 37.4 bits (85), Expect = 3.9, Method: Compositional matrix adjust. Identities = 71/317 (22%), Positives = 129/317 (40%), Gaps = 25/317 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPT 59 M + YI R + F +S +F+ I + +I + N+V + +T ++LL I+ L P Sbjct: 2 MTTINRYIFRELIPPFAISAVFLTSIFIMTRIPEITNMVVNYNTGIFSVLLLIACTL-PR 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + P + M+ + E++ + G + L+ PVL +L + Sbjct: 61 FMEFTIPMSVMISVLLTFMRMSGDNEIIALKGGGITIYRLLPPVLIFCLLGTAVTLWITI 120 Query: 120 IIEPKCRSTIKQLS---AKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFI 175 I P + K L A++ L + S N F+ D+ I IS + L+ +FI Sbjct: 121 IGVPLGNMSFKTLGIAMARSNLNVALSDGTFNSSFK---DVMIYISSMDVKTKKLRDLFI 177 Query: 176 VDSRDTQTHKIYYAQSGSIDLD----RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 D R I A G + D A+ L G V++ S+ I+ + F +Y + + Sbjct: 178 EDRRTKDRVTISVAPEGVLVKDAVTGSYALRLYGGSVNQVDLKSRSINNVGFDTYDINLD 237 Query: 232 SAN---SSTIVLKANDQ----NLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVI 284 A SS + K D+ L L P L+ EFH++ + + + Sbjct: 238 FAQVQKSSKVGNKDFDEMTLNELRAFLKKTSEKPELNAALM-----EFHEKFSIPIACIA 292 Query: 285 FGLISIVAADKRALVRQ 301 G++++ + A R+ Sbjct: 293 MGILAMALGLQAASSRK 309 >gi|163756953|ref|ZP_02164060.1| putative permease [Kordia algicida OT-1] gi|161323072|gb|EDP94414.1| putative permease [Kordia algicida OT-1] Length = 639 Score = 37.4 bits (85), Expect = 4.0, Method: Compositional matrix adjust. Identities = 51/249 (20%), Positives = 101/249 (40%), Gaps = 24/249 (9%) Query: 20 CLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTS 79 C+FI+ W+ I ++ ++ K Y P ++P+V P + + Sbjct: 2 CIFILQTVWLF-----IGELAGKGLDAGVIFKFLLYTTPKLIPLVLPLSILVSSIMTFGR 56 Query: 80 MNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLA 139 + E + +TG S ++ ++ ++L + F N + P S KQ + + LA Sbjct: 57 FAESYEFAAMKSTGISLQRAMRSLIIFIVILGVGTFFFSNSVIP--WSEFKQYNLRKNLA 114 Query: 140 LTFSYLE--ENLFFRLDDDLYIKI-SKYNPNNTLQGIFIV--DSRDTQTHKIYYAQSGSI 194 L E +F + ++ IK+ +KY N+ L I+ S D + + ++ G + Sbjct: 115 KKKPALAIGEGVFNDI-GNINIKVDNKYGDNDQLLDKVIIHQKSNDKKNRIVMKSKKGEL 173 Query: 195 ----DLDRQAIILNDGEVHR-------KSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 D D ++L DG + KS + + + F Y + + + + + L A Sbjct: 174 KSSPDSDILQMVLFDGNRYEDVKSNDPKSVLRMQHAKVSFDKYIMNVDLRDINKVDLDAT 233 Query: 244 DQNLSFLLN 252 D N + N Sbjct: 234 DYNTYKMFN 242 >gi|254294287|ref|YP_003060310.1| permease YjgP/YjgQ family protein [Hirschia baltica ATCC 49814] gi|254042818|gb|ACT59613.1| permease YjgP/YjgQ family protein [Hirschia baltica ATCC 49814] Length = 368 Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 54/115 (46%), Gaps = 5/115 (4%) Query: 10 RCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTE-SLNILLKISGYLIPTVLPMVTPFC 68 C+ LM+ I+ ++ +++++ V + TE SL +++ P ++ PF Sbjct: 13 ECVA-GLLMTLGIILGAILLVDMVEQLRTVGARTELSLLGAFQLTALKAPQLILETMPFA 71 Query: 69 FAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 + + + +NR++EL I +G S + P FLA L I+ II+P Sbjct: 72 ILVGSMLAYSKLNRSSELSAIRASGVSAWRFLAPTFFLAAFLGC---IAMTIIDP 123 >gi|154174487|ref|YP_001408138.1| permease YjgP/YjgQ [Campylobacter curvus 525.92] gi|153793102|gb|EAU00183.2| permease YjgP/YjgQ [Campylobacter curvus 525.92] Length = 342 Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust. Identities = 78/338 (23%), Positives = 140/338 (41%), Gaps = 62/338 (18%) Query: 17 LMSCLFIVF-IAWVIQILQRINLVSSSTE-SLNILLKISGYLIPTVLPMVTPFCFAMETT 74 L S LF++ I + IQI + V+S E + LLK+ +++P VL V P F + Sbjct: 19 LFSTLFLIMSIVFFIQIAR----VTSYIEITFGELLKLYMFMLPRVLLFVVPIAFFVALA 74 Query: 75 NVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP----------K 124 L +++ E ++I G+S ++ K L + LS L I ++ P Sbjct: 75 MTLFRLSKENESIVIFTLGSSPNSIAKFFLAFSAALSALLLIVAIVMIPIASELNSNFID 134 Query: 125 CRSTIKQLSAK-AQLALTFSYLEENLFFRLDDD---LYIKISKYNPNNTLQGIFIVDSRD 180 + T+ +L+ K Q FS + D+ +Y I +NP FI DS+ Sbjct: 135 YKKTVAKLNLKPTQFGQKFSDWMVYVGSEGSDENGTIYKNIVMFNP-------FIKDSQR 187 Query: 181 ---TQTHKIYYAQSG-SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 Q K+ +S + L+ I G+V+ +S FKS T++T + Sbjct: 188 LIVAQNAKMINTKSNIELSLNNGKIYDMRGKVYHQS---------NFKSMTIRTAQSE-- 236 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKR-LTQWLFPVIFGLISIVAADK 295 K ND + + + LE S K+ L+ ++ +F L + + A Sbjct: 237 ----KINDVD------------SIKEYWLEAKTSTKRKKDLSTYVLVALFPLATTLFAIS 280 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP 333 +V R + +++ +FG+ +G+ +I + P Sbjct: 281 FGIVTYRYEKGAVYLG---TFGILFGYFTLIMLLSPRP 315 >gi|260466947|ref|ZP_05813129.1| permease YjgP/YjgQ family protein [Mesorhizobium opportunistum WSM2075] gi|259029244|gb|EEW30538.1| permease YjgP/YjgQ family protein [Mesorhizobium opportunistum WSM2075] Length = 360 Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust. Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 3/74 (4%) Query: 50 LKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAIL 109 + ISG +P ++ PF L S+NR EL+I + G S + P A+L Sbjct: 52 MAISGLRMPMIMLQTVPFVGLFSAMATLVSLNRRYELVIARSAGVSAWQFLLPCCIGALL 111 Query: 110 LSIFLFISENIIEP 123 + +S II P Sbjct: 112 FGV---VSVGIINP 122 >gi|305432149|ref|ZP_07401315.1| conserved hypothetical integral membrane protein [Campylobacter coli JV20] gi|304444814|gb|EFM37461.1| conserved hypothetical integral membrane protein [Campylobacter coli JV20] Length = 341 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 4/119 (3%) Query: 9 LRCIGRSFL---MSCLFIVF-IAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 LR + FL +S F++F I ++ +Q L SS + LLK+ G+++P +L Sbjct: 5 LRYVLNQFLSTNLSIFFVLFTIVSMVFFIQLAKLTSSIEINFVDLLKLYGFMLPRILIFT 64 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P F + T L ++R E +++ G S L K L +A L+S + I ++ P Sbjct: 65 LPIAFFIALTLALFRLSRENESIVLFTLGFSPKILAKFFLKIAALVSALMLIIALVMIP 123 >gi|71279918|ref|YP_267491.1| putative permease [Colwellia psychrerythraea 34H] gi|71145658|gb|AAZ26131.1| putative permease [Colwellia psychrerythraea 34H] Length = 388 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 60/293 (20%), Positives = 118/293 (40%), Gaps = 29/293 (9%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL--NILLKISGYLIPTVLPMV 64 Y+L+ + ++ L + F++ ++ Q R+ L +S S+ +++ IP + + Sbjct: 6 YLLKEVAKTQL-AVFFVLMTIFISQKFVRV-LGDASEGSIPGQLVMTFIALKIPDLAGFI 63 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P + + ++E+ ++ G S +++ L LA++ +IF I + P Sbjct: 64 LPLSLFLGVLLAYGRIYADSEMTVLHACGVSEWYVVRVTLVLAVITAIFTGIFTLYLAPL 123 Query: 125 CRSTIKQLSAKAQLAL--TFSYLEENLFFRLD--DDLYIKISKYNPNNTLQGIFIV---- 176 Q K +LA S L F + D + K N+ +F+ Sbjct: 124 ASEY--QYKVKEELAADSGLSALVSGRFQQTGNQDAVVFIHDKDRETNSFNKVFVAQLPK 181 Query: 177 -DSRDTQ--THKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT 230 D+ D + YA++G + D Q ++L DG + + SK+ + F Y +Q Sbjct: 182 GDNVDASIINSSLVYAKTGKVFEDDTGSQQLVLGDGIRYHRDIESKEFQSVAFNKYYIQI 241 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPV 283 + ++ + LS + N N PEL YR+ R+ FP+ Sbjct: 242 KDQE-----VEHQHRKLSAISTLELYN-NMPPELESAYRATIQWRIA---FPL 285 >gi|328948914|ref|YP_004366251.1| permease YjgP/YjgQ family protein [Treponema succinifaciens DSM 2489] gi|328449238|gb|AEB14954.1| permease YjgP/YjgQ family protein [Treponema succinifaciens DSM 2489] Length = 447 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 37/155 (23%), Positives = 69/155 (44%), Gaps = 4/155 (2%) Query: 46 LNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLF 105 +N +LK+ Y +P V+ PF + L + + E+LI +G ++K VL Sbjct: 125 INSVLKLILYCLPNVISQSAPFATLVGFLMCLGRLVTDNEILIFRASGQRYSLILKSVLA 184 Query: 106 LAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN 165 + +L+S+F FI + P +L + ++ LE R++D + I + Sbjct: 185 MGLLISVFSFIMNDYFLPIGTLKYNRLFKQIIVSNPAIELESKSIKRMNDSTLV-IGNVS 243 Query: 166 PNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQA 200 NN + I + DS +I A G+ D+ + + Sbjct: 244 KNN-VSDIVLFDSEKDGVQRIIMA--GNSDVKKSS 275 >gi|166154183|ref|YP_001654301.1| putative membrane transport protein [Chlamydia trachomatis 434/Bu] gi|166155058|ref|YP_001653313.1| putative membrane transport protein [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335428|ref|ZP_07223672.1| putative membrane transport protein [Chlamydia trachomatis L2tet1] gi|165930171|emb|CAP03655.1| putative membrane transport protein [Chlamydia trachomatis 434/Bu] gi|165931046|emb|CAP06609.1| putative membrane transport protein [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 354 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 36/183 (19%), Positives = 82/183 (44%), Gaps = 4/183 (2%) Query: 49 LLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAI 108 + K++ Y IP +LP + P + + ++ N ++ + +G S+ +I PVL + Sbjct: 48 VFKVTAYQIPYLLPFILPASCFISAFTLFRKLSDNNQITFLKASGASQGMIIFPVLIASG 107 Query: 109 LLSIFLFISENIIEPKCRSTIKQLSAKAQLALTF-SYLEENLFFRLDDDLYIKISKYNPN 167 +L F F + + + CR + A A +A+T + L + L + +D ++I I Sbjct: 108 VLCCFNFYTCSELASICR--FQTGKAIANIAMTSPALLLQTLQKKENDRIFIAIDHCG-K 164 Query: 168 NTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 + + I + + I + ++ D+++ ++ + V K P+ + + Sbjct: 165 SKFDNVIIALKHNQEISNIGFIETIIPDVNKDSVQAKNVLVISKIPLFSEARTSNPNEFY 224 Query: 228 LQT 230 L+T Sbjct: 225 LET 227 >gi|300905894|ref|ZP_07123627.1| hypothetical protein HMPREF9536_03886 [Escherichia coli MS 84-1] gi|301304160|ref|ZP_07210276.1| hypothetical protein HMPREF9347_02760 [Escherichia coli MS 124-1] gi|300402363|gb|EFJ85901.1| hypothetical protein HMPREF9536_03886 [Escherichia coli MS 84-1] gi|300840573|gb|EFK68333.1| hypothetical protein HMPREF9347_02760 [Escherichia coli MS 124-1] gi|315256878|gb|EFU36846.1| putative permease [Escherichia coli MS 85-1] Length = 344 Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 73/164 (44%), Gaps = 19/164 (11%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I +TG S RI L+ A++ I Sbjct: 57 LPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALV------ALVAGILW 110 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEE------NLFFRLDDDLYIKISKYNPNN 168 +S I+ S ++Q Q+ T + L E N+ + + ++ + N Sbjct: 111 TVSLGAIDEWVASPLQQ--QALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQG 168 Query: 169 TLQGIFIVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRK 211 G+ I RD + + Y YA+S +I D+ ++ G H+K Sbjct: 169 QPVGVEIFHYRDDLSLESYIYARSATIKDDKTWVL--HGVNHKK 210 >gi|255349244|ref|ZP_05381251.1| putative membrane transport protein [Chlamydia trachomatis 70] gi|255503781|ref|ZP_05382171.1| putative membrane transport protein [Chlamydia trachomatis 70s] gi|255507462|ref|ZP_05383101.1| putative membrane transport protein [Chlamydia trachomatis D(s)2923] gi|289525885|emb|CBJ15367.1| putative membrane transport protein [Chlamydia trachomatis Sweden2] gi|296435471|gb|ADH17649.1| putative membrane transport protein [Chlamydia trachomatis E/150] gi|296439188|gb|ADH21341.1| putative membrane transport protein [Chlamydia trachomatis E/11023] Length = 354 Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust. Identities = 37/184 (20%), Positives = 84/184 (45%), Gaps = 6/184 (3%) Query: 49 LLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAI 108 + K++ Y IP +LP + P + + ++ N ++ + +G S+ +I PVL + Sbjct: 48 VFKVTAYQIPYLLPFILPVSCFISAFTLFRKLSDNNQITFLKASGASQGMIIFPVLIASG 107 Query: 109 LLSIFLFISENIIEPKCR-STIKQLSAKAQLALTF-SYLEENLFFRLDDDLYIKISKYNP 166 +L F F + + + CR T K++ A +A+T + L + L + +D ++I I Sbjct: 108 VLCCFNFYTCSELASICRFQTGKEI---ANIAMTSPALLLQTLQKKENDRIFIAIDHCG- 163 Query: 167 NNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSY 226 + + I + + I + ++ D+++ ++ + V K P+ + + Sbjct: 164 KSKFDNVIIALKHNQEISNIGFIETIIPDVNKDSVQAKNVLVISKIPLFSEARTSNPNEF 223 Query: 227 TLQT 230 L+T Sbjct: 224 YLET 227 >gi|254360524|ref|ZP_04976673.1| possible inner membrane protein [Mannheimia haemolytica PHL213] gi|261492350|ref|ZP_05988912.1| putative inner membrane protein [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496136|ref|ZP_05992544.1| putative inner membrane protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|153091064|gb|EDN73069.1| possible inner membrane protein [Mannheimia haemolytica PHL213] gi|261308238|gb|EEY09533.1| putative inner membrane protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312033|gb|EEY13174.1| putative inner membrane protein [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 369 Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust. Identities = 37/202 (18%), Positives = 86/202 (42%), Gaps = 7/202 (3%) Query: 31 QILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIID 90 Q+++ ++ S ++++ + G +PT+ ++ P + L +E+ ++ Sbjct: 30 QLVRVLSSAVSGKVPADLVVSLLGLGMPTMAQLMLPLSLFIALLLTLGRFYAESEITVMR 89 Query: 91 NTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLF 150 G + L+K +FL+I + + + P + ++ A+A+ F+ L F Sbjct: 90 ACGIGQGLLVKVAMFLSIFTTALAVYNVFWLTPWAINKQSEMLAEAKANPRFAALSAGQF 149 Query: 151 FRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHK--IYYAQSGSIDL---DRQAIILND 205 Y+ NN+L I++ + +K + A+SG++ Q + L + Sbjct: 150 MSAGG--YVLFIDKIENNSLNDIYVFQPEQQKKNKPSVVVAESGTLQGLPNGDQVLTLAE 207 Query: 206 GEVHRKSPISKDISIMKFKSYT 227 + +P S D I F++Y+ Sbjct: 208 SKRFEGTPQSADFRISHFENYS 229 >gi|316933707|ref|YP_004108689.1| permease YjgP/YjgQ family protein [Rhodopseudomonas palustris DX-1] gi|315601421|gb|ADU43956.1| permease YjgP/YjgQ family protein [Rhodopseudomonas palustris DX-1] Length = 361 Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust. Identities = 20/79 (25%), Positives = 36/79 (45%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 +P +L + PFC + +++R+ EL++ G S I P L+ AI + I Sbjct: 59 VPQLLERLLPFCILIGGMTCYLALSRSLELVVARAAGLSAWEFISPALWSAIAIGIVATT 118 Query: 117 SENIIEPKCRSTIKQLSAK 135 N + + KQ+ A+ Sbjct: 119 IFNPLSAHMQERAKQMEAE 137 >gi|330818019|ref|YP_004361724.1| Permease, putative [Burkholderia gladioli BSR3] gi|327370412|gb|AEA61768.1| Permease, putative [Burkholderia gladioli BSR3] Length = 363 Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust. Identities = 41/191 (21%), Positives = 80/191 (41%), Gaps = 14/191 (7%) Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLA----ILLSIFLFISENIIEPKCRSTIKQ 131 VLT +++E+++ +G S LIKP+ A +L++ F F+ P K Sbjct: 75 VLTRWYKDSEMVVWLASGVSLTRLIKPIGVFATPIILLIAFFAFVGW----PWSNQQSKL 130 Query: 132 LSAKAQLALTFSYLEENLFFRL-DDDLYIKISKYNPNNT-LQGIFIVDSRDTQTHKIYYA 189 + A+ Q S L F + I K + + +Q +F+ + + + + + Sbjct: 131 IKARFQQRDEVSLLAPGQFRESPSTNRVFFIEKMSADQAAVQNVFVTTTEQGKVN-VVVS 189 Query: 190 QSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 Q+G + + I+L +G + P + IM+F+ Y ++ +S T + Sbjct: 190 QTGHTETAQNGDRFIVLENGRRYDGVPGQPNFKIMQFERYGVKIQSKQVVTQPTTTSTPT 249 Query: 247 LSFLLNPNPNN 257 L L +P N Sbjct: 250 LDLLRDPTDEN 260 >gi|293412357|ref|ZP_06655080.1| predicted protein [Escherichia coli B354] gi|291469128|gb|EFF11619.1| predicted protein [Escherichia coli B354] Length = 359 Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 19/164 (11%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I +TG S RI L+ A++ I Sbjct: 57 LPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALV------ALVAGILW 110 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEE------NLFFRLDDDLYIKISKYNPNN 168 +S I+ S ++Q Q+ T + L E N+ + + ++ + N Sbjct: 111 TVSLGAIDEWVASPLQQ--QALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQG 168 Query: 169 TLQGIFIVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRK 211 G+ I RD + + Y +A+S +I+ D+ I+ G H+K Sbjct: 169 QPVGVEIFHYRDDLSLESYIFARSATIEDDKTWIL--HGVNHKK 210 >gi|77919519|ref|YP_357334.1| hypothetical protein Pcar_1923 [Pelobacter carbinolicus DSM 2380] gi|77545602|gb|ABA89164.1| conserved hypothetical membrane protein [Pelobacter carbinolicus DSM 2380] Length = 362 Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust. Identities = 28/118 (23%), Positives = 52/118 (44%), Gaps = 3/118 (2%) Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLS-IFLFI 116 P ++ V P M L R+ EL+ + G S + P+L + +L S I L Sbjct: 59 PLIITQVAPLACLMAVFMTLGGFTRSGELVAMHAGGISLAKIAAPMLRMGLLFSLIILAA 118 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGI 173 +E I+ P + L+ + + Y ++ ++ R + + + I + P TL+GI Sbjct: 119 NEVIVPPSIQRARHILTTEVRGGPAVHYKQDKIWLRHNRSI-LNIRQIEPVQQTLKGI 175 >gi|304410147|ref|ZP_07391766.1| permease YjgP/YjgQ family protein [Shewanella baltica OS183] gi|307302142|ref|ZP_07581900.1| permease YjgP/YjgQ family protein [Shewanella baltica BA175] gi|304351556|gb|EFM15955.1| permease YjgP/YjgQ family protein [Shewanella baltica OS183] gi|306914180|gb|EFN44601.1| permease YjgP/YjgQ family protein [Shewanella baltica BA175] Length = 352 Score = 37.0 bits (84), Expect = 4.9, Method: Compositional matrix adjust. Identities = 31/163 (19%), Positives = 70/163 (42%), Gaps = 1/163 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK +LYI R + + + L + ++ +I+ + ++ LV T S+ +L+P Sbjct: 1 MKILDLYIARVLLSTSALCLLVLTGLSGIIKWVDQLRLVGRGTYSMMDAGIYVLFLVPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + + N+EL+++ +G SR+ + + A+ L + + + Sbjct: 61 IEMFFPMAVLLGALIGMGMLASNSELVVMQASGMSRLQITMSAMKTAVPLMLLVMVLGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISK 163 P +L A + ++ + D DL++ I + Sbjct: 121 GAPIAEQKANELQAIKLSGGSLIKSHRGIWAK-DGDLFVNIGE 162 >gi|189461471|ref|ZP_03010256.1| hypothetical protein BACCOP_02127 [Bacteroides coprocola DSM 17136] gi|189431805|gb|EDV00790.1| hypothetical protein BACCOP_02127 [Bacteroides coprocola DSM 17136] Length = 635 Score = 37.0 bits (84), Expect = 4.9, Method: Compositional matrix adjust. Identities = 55/234 (23%), Positives = 105/234 (44%), Gaps = 22/234 (9%) Query: 1 MKSFELYILRCIGRSFLM---SCLFIVFIAWVIQILQRI--NLVSSSTESLNILLKISGY 55 +K ++++L+ SFL+ FI +++Q L R LV E +N+L + Y Sbjct: 4 IKKLDIFVLK----SFLLLFAGTFFICLFIFMMQFLWRYVDELVGKGLE-INVLAQFFFY 58 Query: 56 LIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLF 115 T++P+ P + + ELL + G + +I+PV+ + L F Sbjct: 59 SGLTLIPLSLPLAILLAALMTFGNFGERYELLSMKAAGIPLLRIIRPVVLFCVFLGGISF 118 Query: 116 ISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD--DLYIKISKYNPNNTLQGI 173 +NII P+ + + L + + E +F+ D ++Y+K K L+ I Sbjct: 119 FFQNIIGPRAQKQLWTLLVSMKQKSPEVDIPEGVFYSDIDGYNIYVK-HKDRKTGLLKDI 177 Query: 174 FIVDSRDT-QTHKIYYAQSGSIDL--DRQAIILN--DGE----VHRKSPISKDI 218 I + D + I +A G ++L D+Q + L+ +GE + +S IS+++ Sbjct: 178 LIYNFSDGFENAHIIWAAEGKLELTADKQHLFLHLYNGEQFENLKSQSVISRNV 231 >gi|332187143|ref|ZP_08388883.1| hypothetical protein SUS17_2304 [Sphingomonas sp. S17] gi|332012843|gb|EGI54908.1| hypothetical protein SUS17_2304 [Sphingomonas sp. S17] Length = 366 Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust. Identities = 37/182 (20%), Positives = 80/182 (43%), Gaps = 12/182 (6%) Query: 12 IGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL----NILLKISGYL---IPTVLPMV 64 + + FL+ I+F ++ +LQ ++++S S L N ++ Y+ P ++ + Sbjct: 16 MAKMFLLRTFAILFA--LVIVLQALDILSESGAILATPGNGEAQVWRYVSLRAPQIIAFI 73 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 PF + T +MN+N+E++ + G S ++ P+L + +++ F + I P+ Sbjct: 74 LPFSVLLGTILTFFTMNQNSEVIALKAAGLSAHQVLAPLLVASAGVAVLSFAFNDRIVPR 133 Query: 125 CRSTIKQLSAKAQLALTF-SYLEENLFFRLDDDLYIK--ISKYNPNNTLQGIFIVDSRDT 181 +T+ + S N++ R DDL + N L G+ + D + Sbjct: 134 ATATLSAWQKVDYGPIPIDSGDRSNVWVRDGDDLISVDLVQGRGANTQLGGVTLYDRKGG 193 Query: 182 QT 183 + Sbjct: 194 GS 195 >gi|148255227|ref|YP_001239812.1| putative permease [Bradyrhizobium sp. BTAi1] gi|146407400|gb|ABQ35906.1| putative permease [Bradyrhizobium sp. BTAi1] Length = 365 Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust. Identities = 24/106 (22%), Positives = 52/106 (49%), Gaps = 2/106 (1%) Query: 30 IQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLII 89 I+++++ + ++S+ S ++ + S + +P +L + PFC + +++R EL++ Sbjct: 37 IEMVRKTSGLASA--SALMVAETSLFRVPQLLEKMMPFCVLIGAMTCYLALSRRLELVVA 94 Query: 90 DNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAK 135 G S I P L AI+L + N + R K++ A+ Sbjct: 95 RAAGVSAWQFIAPALASAIVLGLMATTLYNPMSANLRELSKRMEAE 140 >gi|332088227|gb|EGI93348.1| hypothetical protein SD15574_3353 [Shigella dysenteriae 155-74] Length = 109 Score = 37.0 bits (84), Expect = 5.0, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 45/102 (44%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKP 102 L M+ P + L M ++E+ I G R KP Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGAVRDACTKP 102 >gi|307139669|ref|ZP_07499025.1| hypothetical protein EcolH7_16278 [Escherichia coli H736] Length = 359 Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 73/164 (44%), Gaps = 19/164 (11%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I + G S RI L+ A++ I Sbjct: 57 LPRTLVELSPFVALLGGIVGLGQLSKNSELTAIRSMGFSIFRIALV------ALVAGILW 110 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEE------NLFFRLDDDLYIKISKYNPNN 168 +S I+ S ++Q Q+ T + L E N+ + + ++ + N Sbjct: 111 TVSLGAIDEWVASPLQQ--QALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQG 168 Query: 169 TLQGIFIVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRK 211 G+ I RD + + Y YA+S +I+ D+ I+ G H+K Sbjct: 169 QPVGVEIFHYRDDLSLESYIYARSATIEDDKTWIL--HGVNHKK 210 >gi|89891367|ref|ZP_01202873.1| permease YjgP/YjgQ [Flavobacteria bacterium BBFL7] gi|89516398|gb|EAS19059.1| permease YjgP/YjgQ [Flavobacteria bacterium BBFL7] Length = 481 Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust. Identities = 28/123 (22%), Positives = 53/123 (43%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL ++FL + I+FI + I I ++ + + K Y IP + Sbjct: 1 MKILDRYILTSFIKTFLSVFIVIMFILILQAIWLYIKDLAGKDLDMITIAKFMMYTIPVI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+ P + + V +M N E + + G S ++ ++ + L + F N Sbjct: 61 VPLALPLSIILASIMVFGNMAENYEFAAMKSNGISLQRAMRSLMIVVGTLGVTSFFFANT 120 Query: 121 IEP 123 + P Sbjct: 121 VIP 123 >gi|157960740|ref|YP_001500774.1| permease YjgP/YjgQ family protein [Shewanella pealeana ATCC 700345] gi|157845740|gb|ABV86239.1| permease YjgP/YjgQ family protein [Shewanella pealeana ATCC 700345] Length = 352 Score = 37.0 bits (84), Expect = 5.1, Method: Compositional matrix adjust. Identities = 37/182 (20%), Positives = 82/182 (45%), Gaps = 3/182 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK +LYI R + + ++ L + ++ +I+ + ++ +V + ++ +LIP Sbjct: 1 MKILDLYIARILISTSSLALLVLTGLSGIIKWVDQLRVVGRGSYTMMDAGVYVLFLIPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + + + N+EL+++ ++G SR+ + + AI L I + + Sbjct: 61 IELFFPMAVLLGALIGMGMLASNSELVVMQSSGLSRLQITMSAMKTAIPLMILVMMLTEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENL-FFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P K++ K S +E N + D L++ I +N L+ I + + Sbjct: 121 VAPVAELRAKEI--KRTKVSGGSLIESNRGIWAKDGPLFVSIGGVVDSNHLRDITLYEFS 178 Query: 180 DT 181 DT Sbjct: 179 DT 180 >gi|328948913|ref|YP_004366250.1| permease YjgP/YjgQ family protein [Treponema succinifaciens DSM 2489] gi|328449237|gb|AEB14953.1| permease YjgP/YjgQ family protein [Treponema succinifaciens DSM 2489] Length = 356 Score = 37.0 bits (84), Expect = 5.3, Method: Compositional matrix adjust. Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 3/119 (2%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRI-NLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+L+ F+ + +F V + + + + N +S + S ++ L I Y IP + Sbjct: 6 YMLKRFFPVFIGAVMFFVLVLCLTDLFMNLWNYISKNVSSRDVAL-ILIYYIPKAVWYAV 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE-NIIEP 123 P T +L+ ELL + +G S P+L +A+ +S LFI E NI+ P Sbjct: 65 PIAMLFATAYMLSDFYARNELLAVFASGISLFKFSVPLLTVAVAMSFALFIFEDNIVVP 123 >gi|229496640|ref|ZP_04390354.1| permease, YjgP/YjgQ family [Porphyromonas endodontalis ATCC 35406] gi|229316537|gb|EEN82456.1| permease, YjgP/YjgQ family [Porphyromonas endodontalis ATCC 35406] Length = 358 Score = 36.6 bits (83), Expect = 5.5, Method: Compositional matrix adjust. Identities = 68/278 (24%), Positives = 117/278 (42%), Gaps = 33/278 (11%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPTVLPMVT 65 YI+R ++ S L I+ +A V I +RI+ + SL I+ +P M + Sbjct: 8 YIIRLFLGTYFSSILLILSVAIVFDINERISKFLNPECSLYEIVFHYYLNFVPYYANMFS 67 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLF-ISENIIEPK 124 P + + + TE++ I +G S L++P LF A ++++ F +S +I P Sbjct: 68 PLFVFLSVIFFTSKLAEKTEIIAILASGVSFKRLLRPYLFSAAIVALLTFLLSSFVIPPG 127 Query: 125 CRS----TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 R K K Q T++ E++ ++ L+ I Y+ +N F++D + Sbjct: 128 SRVRNDFQNKYFRDKRQ---TYA---ESVQIQVSPSLFAYIHSYSADNKTGYNFMLDKFE 181 Query: 181 TQTHKIYY-AQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKF--KSYTLQTESANSST 237 T K AQ+ D LN ++ D SI ++ K TL+ + +T Sbjct: 182 HNTIKSRLTAQTAEYD------TLNTWRLY-------DYSITRYGAKRDTLERGTQLDTT 228 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKR 275 I LK D FL++ + Y +L Y E R Sbjct: 229 INLKPQD----FLISA-VDAETYTTPVLHQYIGELKSR 261 >gi|91792233|ref|YP_561884.1| permease YjgP/YjgQ [Shewanella denitrificans OS217] gi|91714235|gb|ABE54161.1| permease YjgP/YjgQ [Shewanella denitrificans OS217] Length = 351 Score = 36.6 bits (83), Expect = 5.5, Method: Compositional matrix adjust. Identities = 35/188 (18%), Positives = 82/188 (43%), Gaps = 2/188 (1%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 +LYI R I + + L + ++ +I+ + ++ LV + ++ +LIP + M Sbjct: 3 LDLYIARAILATSSLCLLILTGLSGIIKWVDQLRLVGRGSYTMIDAGIYVLFLIPRDIEM 62 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + + + ++EL+++ +G SR+ + + A+ L + + + P Sbjct: 63 FFPMAVLLGALIGMGMLASSSELVVMQASGMSRLQISMSAMKTAVPLMLLVMVLGEWGAP 122 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SRDTQ 182 + K+L A + ++ + D DL++ I + N+L I + + + Sbjct: 123 VAERSAKELQATKLSGGSLIKSHRGIWAK-DGDLFVNIGEVETVNSLNNITLYEFDEAMK 181 Query: 183 THKIYYAQ 190 K+ +AQ Sbjct: 182 LVKVIHAQ 189 >gi|325300373|ref|YP_004260290.1| permease YjgP/YjgQ family protein [Bacteroides salanitronis DSM 18170] gi|324319926|gb|ADY37817.1| permease YjgP/YjgQ family protein [Bacteroides salanitronis DSM 18170] Length = 636 Score = 36.6 bits (83), Expect = 5.7, Method: Compositional matrix adjust. Identities = 53/234 (22%), Positives = 105/234 (44%), Gaps = 22/234 (9%) Query: 1 MKSFELYILRCIGRSFLM---SCLFIVFIAWVIQILQRI--NLVSSSTESLNILLKISGY 55 +K +++IL+ SFL+ FI +++Q L R LV E +NIL + Y Sbjct: 4 IKKLDIFILK----SFLLLFAGTFFICLFIFMMQFLWRYVDELVGKGLE-INILAQFFFY 58 Query: 56 LIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLF 115 T++P+ P + + ELL + G + ++ PV+ L + F Sbjct: 59 SGLTLIPISLPLAILLAALMTFGNFGERYELLSMKAAGIPLLRIMCPVILFCAFLGLMSF 118 Query: 116 ISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD--DLYIKISKYNPNNTLQGI 173 I +N I P+ + + L + + E +F+ D ++Y+K K L+ + Sbjct: 119 IFQNEIGPRAQKKLWTLLVSMKQKSPEVDIPEGVFYSEIDGYNIYVK-HKDRETGMLKDV 177 Query: 174 FIVDSRDT-QTHKIYYAQSGSIDL--DRQAIILN--DGE----VHRKSPISKDI 218 I + D + I +A+ G +++ D++ + L+ +GE + +S IS+++ Sbjct: 178 LIYNFSDGFENAHIIWAEEGKLEMTADKKHLYLHLYNGEQFENLKSQSVISRNV 231 >gi|56461046|ref|YP_156327.1| permease [Idiomarina loihiensis L2TR] gi|56180056|gb|AAV82778.1| Predicted permease [Idiomarina loihiensis L2TR] Length = 356 Score = 36.6 bits (83), Expect = 5.7, Method: Compositional matrix adjust. Identities = 24/117 (20%), Positives = 55/117 (47%), Gaps = 2/117 (1%) Query: 83 NTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTF 142 N+EL+++ G SR+ +I V+ AI++ + + I P + + + ++A + Sbjct: 84 NSELVVMMAAGRSRLNIIGAVMKSAIIMMVAVMAIGEWIAPPMEAQGRAIRSQAISGGSL 143 Query: 143 SYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT-QTHKIYYAQSGSIDLDR 198 ++ ++ + D +I I + L + I D D + K+ YA++ + D+ Sbjct: 144 ISAQQGVWAK-DGSDFINIGEVEDTGRLNDVLIYDFNDNRELQKVTYARTANFSGDK 199 >gi|331643680|ref|ZP_08344811.1| putative permease [Escherichia coli H736] gi|331037151|gb|EGI09375.1| putative permease [Escherichia coli H736] Length = 386 Score = 36.6 bits (83), Expect = 6.0, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 19/164 (11%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I + G S RI L+ A++ I Sbjct: 84 LPRTLVELSPFVALLGGIVGLGQLSKNSELTAIRSMGFSIFRIALV------ALVAGILW 137 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEE------NLFFRLDDDLYIKISKYNPNN 168 +S I+ S ++Q + Q+ T + L E N+ + + ++ + N Sbjct: 138 TVSLGAIDEWVASPLQQQA--LQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQG 195 Query: 169 TLQGIFIVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRK 211 G+ I RD + + Y YA+S +I+ D+ I+ G H+K Sbjct: 196 QPVGVEIFHYRDDLSLESYIYARSATIEDDKTWIL--HGVNHKK 237 >gi|237736827|ref|ZP_04567308.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817] gi|229420689|gb|EEO35736.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817] Length = 360 Score = 36.6 bits (83), Expect = 6.2, Method: Compositional matrix adjust. Identities = 53/233 (22%), Positives = 103/233 (44%), Gaps = 24/233 (10%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI + +SF++S + + I V Q+ + + +S + + Y I T+ Sbjct: 1 MKIIDKYISKNFIKSFMLSLMAFMGIFIVSQLFRVVKYLSDGRFTPGDAV----YYIITL 56 Query: 61 LPM----VTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 LP V P + + ++SM N E++ + +G RI L P++ AI+ + Sbjct: 57 LPRTFIDVAPLAVLLGSMMTISSMASNLEIISLKTSGIKFRRIVLF-PIIISAIISGVVF 115 Query: 115 FISENI--IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKI-SKYNPNNTL- 170 F+++ + I K ++ + ++A + N F R +D YI + K N Sbjct: 116 FVNDTLYPISLKINRDLRSGEVQKRVA---PLEKRNAFLRGEDSNYIYLMQKVNRETGFA 172 Query: 171 QGIFIVDSRDT--QTHKIYYAQSGSIDLDRQAIILNDGEVH----RKSPISKD 217 + I IVD + + +I A G + ++ +L D ++ K P +K+ Sbjct: 173 ENIEIVDLNKSFDKIERIITAPEGRYNFGKKVWMLKDVNIYYGDDNKKPETKE 225 >gi|238897461|ref|YP_002923138.1| putative permease [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465216|gb|ACQ66990.1| putative permease [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 364 Score = 36.6 bits (83), Expect = 6.3, Method: Compositional matrix adjust. Identities = 54/216 (25%), Positives = 87/216 (40%), Gaps = 23/216 (10%) Query: 84 TELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFS 143 +E++ + G + LIK L LA L S+F I+ P K++ + ++ S Sbjct: 83 SEIIAMYACGVGKTRLIKVALVLAALTSLFATINVFYFSPWSVKHEKKIINEERVNPGLS 142 Query: 144 YLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV--DSRDTQTHKIYYAQSGSIDLDR--- 198 L + F D + + N IF+ +S TQ + A SG I Sbjct: 143 ALVKGQFQSSPDGKIVLFIQDIQNKKFHKIFLAQRESNHTQRPTVVVANSGYISAPAPGI 202 Query: 199 QAIILNDGEVHRKSPISKDISIMKFKSY----TLQTESANSSTIVLKANDQNLSFLLNPN 254 Q + LN G + P D I F Y + ++ + NS+T A ++S L Sbjct: 203 QLLTLNHGMNYEGIPPLGDFRITYFNHYQAVISRKSVTKNSNT----AQQMSMSSLW--E 256 Query: 255 PNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 N+P+ R EL H RLT + VI +++ Sbjct: 257 ANDPDTRAEL--------HWRLTLIVSVVIMAFMAV 284 >gi|297172254|gb|ADI23232.1| predicted permeases [uncultured nuHF2 cluster bacterium HF0770_13K08] Length = 351 Score = 36.6 bits (83), Expect = 6.4, Method: Compositional matrix adjust. Identities = 22/78 (28%), Positives = 38/78 (48%) Query: 71 METTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIK 130 + T +S+N+N ELL I ++G L PVL ++ L++ F + S+N + T Sbjct: 73 LATIATYSSLNKNAELLAIRSSGIGGWRLAFPVLAVSALIASFAYFSQNYMYTWMHQTWV 132 Query: 131 QLSAKAQLALTFSYLEEN 148 + A+L + EE Sbjct: 133 KQENSARLPPLWKVGEEQ 150 >gi|323173776|gb|EFZ59405.1| hypothetical protein ECLT68_2094 [Escherichia coli LT-68] Length = 359 Score = 36.6 bits (83), Expect = 6.5, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 73/164 (44%), Gaps = 19/164 (11%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I + G S RI L+ A++ I Sbjct: 57 LPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSMGFSIFRIALV------ALVAGILW 110 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEE------NLFFRLDDDLYIKISKYNPNN 168 +S I+ S ++Q Q+ T + L E N+ + + ++ + N Sbjct: 111 TVSLGAIDEWVASPLQQ--QALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQG 168 Query: 169 TLQGIFIVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRK 211 G+ I RD + + Y YA+S +I+ D+ I+ G H+K Sbjct: 169 QPVGVEIFHYRDDLSLESYIYARSATIEDDKTWIL--HGVNHKK 210 >gi|150395988|ref|YP_001326455.1| permease YjgP/YjgQ family protein [Sinorhizobium medicae WSM419] gi|150027503|gb|ABR59620.1| permease YjgP/YjgQ family protein [Sinorhizobium medicae WSM419] Length = 360 Score = 36.6 bits (83), Expect = 6.5, Method: Compositional matrix adjust. Identities = 47/198 (23%), Positives = 86/198 (43%), Gaps = 21/198 (10%) Query: 16 FLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTN 75 FL+ ++FI ++ R++ + T S +L+ + + IPT+L PF Sbjct: 21 FLIGIFALIFIIDFSELTSRMSNLPHYTVSGALLM--TTFRIPTILQQTVPFVALFAAMA 78 Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSA- 134 L S+NR EL++ G S ++P + A+ IF ++ +I P K+ A Sbjct: 79 ALISLNRRYELVVTRAAGISVWQFLRPFVVGAL---IFGALAVVVINPLAAWGTKKAEAL 135 Query: 135 KAQLALTFSYLEENL-FFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ---THKIYYAQ 190 +A+ T S ++ + R Y+ +T+ G V + T+ I++ Sbjct: 136 EAEWGSTRSAAANSIPWLR---------QIYDGTDTIIGARSVQNGGTELINVTVIHFDP 186 Query: 191 SGSIDL--DRQAIILNDG 206 G+I L D ++ L DG Sbjct: 187 QGAITLRQDAKSAKLEDG 204 >gi|288940756|ref|YP_003442996.1| permease YjgP/YjgQ family protein [Allochromatium vinosum DSM 180] gi|288896128|gb|ADC61964.1| permease YjgP/YjgQ family protein [Allochromatium vinosum DSM 180] Length = 380 Score = 36.6 bits (83), Expect = 6.6, Method: Compositional matrix adjust. Identities = 43/233 (18%), Positives = 89/233 (38%), Gaps = 7/233 (3%) Query: 10 RCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCF 69 R + FL L +V I + L+ + V+ ++++ + I + + P F Sbjct: 17 REAAQVFLAIVLVLVLILASLMFLRTLEEVNLGGLGVDVVFRYLSLQIQRDISSLLPPAF 76 Query: 70 AMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTI 129 + L R++EL+ + G L + L LA+ ++ ++P + I Sbjct: 77 FLAILVTLARFARDSELIAMQACGVGPPRLYRTFLLLAVPVAFVTGWVALDLKPHAAAGI 136 Query: 130 KQ--LSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 +Q L K Q A + + + I + + + L +F++D R +T ++ Sbjct: 137 QQIRLQQKEQAAQIAGLQAGRFYVEEQGKVVVYIGEIDQHKLLGDVFVLDRRGEKT-RLV 195 Query: 188 YAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + SG ++ + L G S I F+ Y ++ A S+ Sbjct: 196 VSDSGRHRIEESTGDHLVTLTQGHRFDGQAGSGAYLIGDFERYEIRLADAGSA 248 >gi|170018762|ref|YP_001723716.1| permease YjgP/YjgQ family protein [Escherichia coli ATCC 8739] gi|297517383|ref|ZP_06935769.1| hypothetical protein EcolOP_07055 [Escherichia coli OP50] gi|300916914|ref|ZP_07133617.1| conserved hypothetical protein [Escherichia coli MS 115-1] gi|300923636|ref|ZP_07139664.1| hypothetical protein HMPREF9548_01829 [Escherichia coli MS 182-1] gi|300950817|ref|ZP_07164703.1| conserved hypothetical protein [Escherichia coli MS 116-1] gi|300958360|ref|ZP_07170501.1| hypothetical protein HMPREF9547_04074 [Escherichia coli MS 175-1] gi|312972760|ref|ZP_07786933.1| conserved hypothetical protein [Escherichia coli 1827-70] gi|169753690|gb|ACA76389.1| permease YjgP/YjgQ family protein [Escherichia coli ATCC 8739] gi|242378535|emb|CAQ33321.1| ybl135 [Escherichia coli BL21(DE3)] gi|284923006|emb|CBG36098.1| putative permease [Escherichia coli 042] gi|300314944|gb|EFJ64728.1| hypothetical protein HMPREF9547_04074 [Escherichia coli MS 175-1] gi|300415884|gb|EFJ99194.1| conserved hypothetical protein [Escherichia coli MS 115-1] gi|300420077|gb|EFK03388.1| hypothetical protein HMPREF9548_01829 [Escherichia coli MS 182-1] gi|300449912|gb|EFK13532.1| conserved hypothetical protein [Escherichia coli MS 116-1] gi|310332702|gb|EFP99915.1| conserved hypothetical protein [Escherichia coli 1827-70] gi|323936016|gb|EGB32311.1| permease YjgP/YjgQ family protein [Escherichia coli E1520] gi|323941919|gb|EGB38098.1| permease YjgP/YjgQ family protein [Escherichia coli E482] gi|332344938|gb|AEE58272.1| conserved hypothetical protein [Escherichia coli UMNK88] Length = 359 Score = 36.6 bits (83), Expect = 6.6, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 73/164 (44%), Gaps = 19/164 (11%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I + G S RI L+ A++ I Sbjct: 57 LPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSMGFSIFRIALV------ALVAGILW 110 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEE------NLFFRLDDDLYIKISKYNPNN 168 +S I+ S ++Q Q+ T + L E N+ + + ++ + N Sbjct: 111 TVSLGAIDEWVASPLQQ--QALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQG 168 Query: 169 TLQGIFIVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRK 211 G+ I RD + + Y YA+S +I+ D+ I+ G H+K Sbjct: 169 QPVGVEIFHYRDDLSLESYIYARSATIEDDKTWIL--HGVNHKK 210 >gi|78060332|ref|YP_366907.1| ATPase AAA_5 [Burkholderia sp. 383] gi|77964882|gb|ABB06263.1| ATPase AAA_5 [Burkholderia sp. 383] Length = 400 Score = 36.6 bits (83), Expect = 6.7, Method: Compositional matrix adjust. Identities = 18/50 (36%), Positives = 27/50 (54%) Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLA 107 P V P+ + F TNVL + N +L+I +TGT + +LI+ LA Sbjct: 127 PLVPPLNPAYLFTARATNVLEDIVENRRILLIGHTGTGKTSLIEQAAALA 176 >gi|294670275|ref|ZP_06735168.1| permease, YjgP/YjgQ family [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308012|gb|EFE49255.1| permease, YjgP/YjgQ family [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 370 Score = 36.6 bits (83), Expect = 6.8, Method: Compositional matrix adjust. Identities = 49/259 (18%), Positives = 109/259 (42%), Gaps = 10/259 (3%) Query: 15 SFLMSCLFIVFIAWVIQILQRINLVSSSTE---SLNILLKISGYLIPTVLPMVTPFCFAM 71 +F +F+V +A V+ Q INL+ + + +++ + + G+ + P++ + Sbjct: 12 TFTAIGIFVVILA-VLVSTQAINLLGRAADGRVAVDAVAALIGFWTLGMTPLLLVLTAYI 70 Query: 72 ETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQ 131 T VLT R++E+ + + G S ++PVL A+ + + + + P ++ Sbjct: 71 STLTVLTRFWRDSEMSVWLSCGLSLRQWVRPVLSFALPFAALVAAMQLSVLPWAELRSRE 130 Query: 132 LSAKAQLALTFSYLEENLFFRL---DDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYY 188 + + S +E F L + +Y + + ++ +F+ + D I + Sbjct: 131 FAEILKQKQELSMVEAGEFRTLGKKNGRVYFVGTFDTGSGIMKNLFLREQDDKGRENIIF 190 Query: 189 AQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 A+ G L +++ + L G + P D + + F+ L SA I + + Sbjct: 191 AKEGRFSLTDNKRTLELTQGYRYGGIPGEADYNQVSFEHLNLII-SATPKIINPIDHRRT 249 Query: 247 LSFLLNPNPNNPNYRPELL 265 + +NP +R EL+ Sbjct: 250 IPTAKLIGSDNPQHRAELM 268 >gi|15605574|ref|NP_220360.1| hypothetical protein CT839 [Chlamydia trachomatis D/UW-3/CX] gi|76789584|ref|YP_328670.1| permease [Chlamydia trachomatis A/HAR-13] gi|237803271|ref|YP_002888465.1| putative membrane transport protein [Chlamydia trachomatis B/Jali20/OT] gi|237805192|ref|YP_002889346.1| putative membrane transport protein [Chlamydia trachomatis B/TZ1A828/OT] gi|255311680|ref|ZP_05354250.1| putative membrane transport protein [Chlamydia trachomatis 6276] gi|255317981|ref|ZP_05359227.1| putative membrane transport protein [Chlamydia trachomatis 6276s] gi|3329310|gb|AAC68436.1| hypothetical protein CT_839 [Chlamydia trachomatis D/UW-3/CX] gi|76168114|gb|AAX51122.1| predicted permease [Chlamydia trachomatis A/HAR-13] gi|231273492|emb|CAX10408.1| putative membrane transport protein [Chlamydia trachomatis B/TZ1A828/OT] gi|231274505|emb|CAX11301.1| putative membrane transport protein [Chlamydia trachomatis B/Jali20/OT] gi|296436395|gb|ADH18569.1| putative membrane transport protein [Chlamydia trachomatis G/9768] gi|296437326|gb|ADH19496.1| putative membrane transport protein [Chlamydia trachomatis G/11222] gi|296438254|gb|ADH20415.1| putative membrane transport protein [Chlamydia trachomatis G/11074] gi|297140755|gb|ADH97513.1| putative membrane transport protein [Chlamydia trachomatis G/9301] gi|297748967|gb|ADI51513.1| Predicted permease [Chlamydia trachomatis D-EC] gi|297749847|gb|ADI52525.1| Predicted permease [Chlamydia trachomatis D-LC] Length = 354 Score = 36.6 bits (83), Expect = 6.8, Method: Compositional matrix adjust. Identities = 37/184 (20%), Positives = 85/184 (46%), Gaps = 6/184 (3%) Query: 49 LLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAI 108 + K++ Y IP +LP + P + + ++ N ++ + +G S+ +I PVL + Sbjct: 48 VFKVTAYQIPYLLPFILPASCFISAFTLFRKLSDNNQITFLKASGASQGMIIFPVLIASG 107 Query: 109 LLSIFLFISENIIEPKCR-STIKQLSAKAQLALTF-SYLEENLFFRLDDDLYIKISKYNP 166 +L F F + + + CR T K++ A +A+T + L + L + +D ++I I + Sbjct: 108 VLCCFNFYTCSELASICRFQTGKEI---ANIAMTSPALLLQTLQKKENDRIFIAID-HCG 163 Query: 167 NNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSY 226 + + I + + I + ++ D+++ ++ + V K P+ + + Sbjct: 164 KSKFDNVVIALKHNQEISNIGFIETIIPDVNKDSVQAKNVLVISKIPLFSEARTSNPNEF 223 Query: 227 TLQT 230 L+T Sbjct: 224 YLET 227 >gi|301643655|ref|ZP_07243696.1| conserved hypothetical protein [Escherichia coli MS 146-1] gi|301078039|gb|EFK92845.1| conserved hypothetical protein [Escherichia coli MS 146-1] Length = 349 Score = 36.6 bits (83), Expect = 6.9, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 73/164 (44%), Gaps = 19/164 (11%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I + G S RI L+ A++ I Sbjct: 57 LPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSMGFSIFRIALV------ALVAGILW 110 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEE------NLFFRLDDDLYIKISKYNPNN 168 +S I+ S ++Q Q+ T + L E N+ + + ++ + N Sbjct: 111 TVSLGAIDEWVASPLQQ--QALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQG 168 Query: 169 TLQGIFIVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRK 211 G+ I RD + + Y YA+S +I+ D+ I+ G H+K Sbjct: 169 QPVGVEIFHYRDDLSLESYIYARSATIEDDKTWIL--HGVNHKK 210 >gi|300870020|ref|YP_003784891.1| putative permease [Brachyspira pilosicoli 95/1000] gi|300687719|gb|ADK30390.1| putative permease, YjgP/YjgQ family [Brachyspira pilosicoli 95/1000] Length = 356 Score = 36.6 bits (83), Expect = 6.9, Method: Compositional matrix adjust. Identities = 24/114 (21%), Positives = 48/114 (42%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+L+ F+ S + V + + + +++ + E++ + P Sbjct: 1 MKKLNSYLLKEFLSMFVGSLILFVILVTIADLSSKLSYYTEHPENMKYFITYHAARTPHN 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFL 114 L + P +T VL + +N E+L + N+G S P+ + I L + L Sbjct: 61 LYYLFPIALMFSSTYVLGTFVKNKEMLAVQNSGISLFKFSSPIFIIVIALCLGL 114 >gi|78212778|ref|YP_381557.1| permease [Synechococcus sp. CC9605] gi|78197237|gb|ABB35002.1| possible permease [Synechococcus sp. CC9605] Length = 386 Score = 36.6 bits (83), Expect = 6.9, Method: Compositional matrix adjust. Identities = 18/81 (22%), Positives = 44/81 (54%) Query: 46 LNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLF 105 + I +++ + IP L P M + V T ++ N+EL + + G + + +I L Sbjct: 59 ITIAVQVLLFSIPRWLAFSVPIGTLMASLFVFTRLSANSELTALRSLGITTVRMISAALA 118 Query: 106 LAILLSIFLFISENIIEPKCR 126 L++++++F F+ +++ P+ + Sbjct: 119 LSMVMTLFTFVLNDVVVPRSQ 139 >gi|189464158|ref|ZP_03012943.1| hypothetical protein BACINT_00494 [Bacteroides intestinalis DSM 17393] gi|189437948|gb|EDV06933.1| hypothetical protein BACINT_00494 [Bacteroides intestinalis DSM 17393] Length = 632 Score = 36.6 bits (83), Expect = 6.9, Method: Compositional matrix adjust. Identities = 66/354 (18%), Positives = 150/354 (42%), Gaps = 35/354 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQR-INLVSSSTESLNILLKISGYLIPT 59 +K +++IL+ F M FI +++Q L + ++ + +++L + Y T Sbjct: 4 IKKLDIFILKSFCTLF-MGTFFICLFIFMMQFLWKYVDEMVGKGLEMSVLAQFFFYSALT 62 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++P P + + ELL + G S + +++P++ I + F +N Sbjct: 63 LVPASLPLAILLAALITFGNFGERFELLAMKAAGISLLKIMRPLIVFIIFICGVSFYFQN 122 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD--DLYIKISKYNPNNTLQGIFIVD 177 +I PK ++ + L + + E +F+ D +LY+K K L + I + Sbjct: 123 VIGPKAQTKLWTLLISMKQKSPELDIPEGVFYDEIDGYNLYVK-HKNRKTGMLYDVLIYN 181 Query: 178 -SRDTQTHKIYYAQSGSIDL--DRQAIILN--DGEV---------------HRKSPISKD 217 + + +I + SG +++ D+Q + L+ +GE +R+ + Sbjct: 182 FEKGFENAQIIKSDSGRLEMTADKQHLYLHLYNGEQFENLKSQNMNQKNVPYRREAFREK 241 Query: 218 ISIMKFKS-------YTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYR- 269 +I++F S + ++S + +L+A +++ + N + ++ + TY+ Sbjct: 242 HAIIEFNSDFNMVDAGIMSSQSNSKDMAMLQAGIDSMT-VQNDSVGRAYFKEAMNGTYKI 300 Query: 270 -SEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGF 322 ++ K T + G ++ + A + Q++KI +S + S G W F Sbjct: 301 TADLKKADTLKIEQAHLGEYNVDSLFNVATLSQKQKIISTAVSRAESAGSDWSF 354 >gi|26249547|ref|NP_755587.1| hypothetical protein c3716 [Escherichia coli CFT073] gi|254162933|ref|YP_003046041.1| hypothetical protein ECB_02855 [Escherichia coli B str. REL606] gi|26109955|gb|AAN82160.1|AE016766_248 Hypothetical protein c3716 [Escherichia coli CFT073] gi|253974834|gb|ACT40505.1| conserved hypothetical protein [Escherichia coli B str. REL606] gi|253978989|gb|ACT44659.1| conserved hypothetical protein [Escherichia coli BL21(DE3)] gi|309703415|emb|CBJ02754.1| putative permease [Escherichia coli ETEC H10407] Length = 386 Score = 36.2 bits (82), Expect = 7.2, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 19/164 (11%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I + G S RI L+ A++ I Sbjct: 84 LPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSMGFSIFRIALV------ALVAGILW 137 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEE------NLFFRLDDDLYIKISKYNPNN 168 +S I+ S ++Q + Q+ T + L E N+ + + ++ + N Sbjct: 138 TVSLGAIDEWVASPLQQQA--LQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQG 195 Query: 169 TLQGIFIVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRK 211 G+ I RD + + Y YA+S +I+ D+ I+ G H+K Sbjct: 196 QPVGVEIFHYRDDLSLESYIYARSATIEDDKTWIL--HGVNHKK 237 >gi|297170682|gb|ADI21706.1| hypothetical protein [uncultured Verrucomicrobiales bacterium HF0130_14P10] Length = 392 Score = 36.2 bits (82), Expect = 7.3, Method: Compositional matrix adjust. Identities = 17/57 (29%), Positives = 33/57 (57%) Query: 55 YLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLS 111 +L+P+ LP + P + T V+ ++ RN E+ ++ G + + L + +L A+LLS Sbjct: 55 WLVPSYLPWLLPIALFVSTLFVVATLRRNNEIAVLRACGVNVLRLSRSLLVTALLLS 111 >gi|218264803|ref|ZP_03478497.1| hypothetical protein PRABACTJOHN_04207 [Parabacteroides johnsonii DSM 18315] gi|218221776|gb|EEC94426.1| hypothetical protein PRABACTJOHN_04207 [Parabacteroides johnsonii DSM 18315] Length = 655 Score = 36.2 bits (82), Expect = 7.3, Method: Compositional matrix adjust. Identities = 28/112 (25%), Positives = 54/112 (48%), Gaps = 8/112 (7%) Query: 16 FLMS---CLFIVFIAWVIQILQR-INLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAM 71 FLM+ CLFIV ++Q L R I+ + + +L ++ Y ++PM P + Sbjct: 19 FLMTFGICLFIV----LMQFLWRYIDDMVGKGLGIPVLAEMFMYAALFLVPMALPLAILL 74 Query: 72 ETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 + ++ ELL + + G S + +++P++ ++SI F +N P Sbjct: 75 ASLMTFGNLGERLELLAMKSAGVSLVHIMRPLIITISMISIGAFFFQNYAMP 126 >gi|320539289|ref|ZP_08038959.1| putative conserved inner membrane protein [Serratia symbiotica str. Tucson] gi|320030681|gb|EFW12690.1| putative conserved inner membrane protein [Serratia symbiotica str. Tucson] Length = 396 Score = 36.2 bits (82), Expect = 7.3, Method: Compositional matrix adjust. Identities = 42/199 (21%), Positives = 80/199 (40%), Gaps = 15/199 (7%) Query: 84 TELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFS 143 +E+ ++ G + TLI + LAIL S ++ P S + ++A+ + + Sbjct: 115 SEITVMHACGLGKRTLIIAAMILAILTSAVAAVNVFWANPIASSYQDVVVSEAKANPSIA 174 Query: 144 YLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR--DTQTHKIYYAQSGSIDLDR--- 198 L E F D + +T +F+ R TQ + A+ G+I+ + Sbjct: 175 GLVEGQFKPSQDGNAVVFIGNVKGSTFNNVFLAQLRTNGTQRPSVVVAEHGNINPQKDGS 234 Query: 199 QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNP 258 Q + L+ G + + +D I F +Y + + + V + +S ++P Sbjct: 235 QVVTLDKGTRFEGTALLRDFRITDFNNY--KAVIGHRAVAVDNTQSEQMSMKTLWQSDDP 292 Query: 259 NYRPELLETYRSEFHKRLT 277 + R+EFH RLT Sbjct: 293 D--------ARAEFHWRLT 303 >gi|302392908|ref|YP_003828728.1| permease [Acetohalobium arabaticum DSM 5501] gi|302204985|gb|ADL13663.1| permease YjgP/YjgQ family protein [Acetohalobium arabaticum DSM 5501] Length = 364 Score = 36.2 bits (82), Expect = 7.5, Method: Compositional matrix adjust. Identities = 39/181 (21%), Positives = 84/181 (46%), Gaps = 12/181 (6%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 +P V+ + P + T ++ ++E++ + G S I LI PVL +A+LLS + Sbjct: 58 LPEVIVLTFPMSMLLATLLSFGRLSGDSEVVALKAGGVSFIRLIIPVLIVALLLSGLTIL 117 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS----KYNPNN---T 169 + I P+ + +++ + ++NL D KI Y+ + T Sbjct: 118 ANETIVPQSKDAYRRIVWNIKHQEKMPTTQKNLRIAPLDKKTGKIDYIFYAYHFDGSDLT 177 Query: 170 LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD-ISIMKFKSYTL 228 ++ + + D ++ + ++ A+ +R I DG ++ + SKD + M+F++YT+ Sbjct: 178 MEEVSLQDYQNGKLVQVIEAKRARWTDERWQFI--DGTIYNVN--SKDKVPTMEFETYTV 233 Query: 229 Q 229 + Sbjct: 234 K 234 >gi|110634109|ref|YP_674317.1| permease YjgP/YjgQ [Mesorhizobium sp. BNC1] gi|110285093|gb|ABG63152.1| permease YjgP/YjgQ [Chelativorans sp. BNC1] Length = 359 Score = 36.2 bits (82), Expect = 8.1, Method: Compositional matrix adjust. Identities = 29/126 (23%), Positives = 53/126 (42%), Gaps = 2/126 (1%) Query: 23 IVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNR 82 +V+I +I R + T S L ++ +P ++ PF + L S+NR Sbjct: 28 LVYIVTFTEITGRAGDLEGFTTSWA--LGLAALQLPIIMQQAVPFIGLVAAIATLISLNR 85 Query: 83 NTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTF 142 EL+I G S + P+ F A + + + N I + ++ + L A + A T Sbjct: 86 KYELVIARAAGISAWQFLTPIAFGAFVFGLLTVLVLNPIAARAFASAQMLEATVRGADTS 145 Query: 143 SYLEEN 148 + +E Sbjct: 146 NNAKER 151 >gi|182677644|ref|YP_001831790.1| permease YjgP/YjgQ family protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182633527|gb|ACB94301.1| permease YjgP/YjgQ family protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 362 Score = 36.2 bits (82), Expect = 8.2, Method: Compositional matrix adjust. Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 2/91 (2%) Query: 23 IVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNR 82 ++++ ++++L+R +T SL L P+V + PFC T ++ R Sbjct: 29 MIYVIDLVEMLRRAGNRPGATASLIAFLSF--LRAPSVSEQILPFCVLFGTMATFINLTR 86 Query: 83 NTELLIIDNTGTSRITLIKPVLFLAILLSIF 113 ELL+ G S L+ P L +A+ + IF Sbjct: 87 RLELLVARAAGISIWQLMMPPLGIALAIGIF 117 >gi|270295684|ref|ZP_06201885.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270274931|gb|EFA20792.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 617 Score = 36.2 bits (82), Expect = 8.3, Method: Compositional matrix adjust. Identities = 62/337 (18%), Positives = 134/337 (39%), Gaps = 32/337 (9%) Query: 17 LMSCLFIVFIAWVIQILQR-INLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTN 75 M FI +++Q L R ++ + + +L + Y +++P P + Sbjct: 3 FMGTFFICLFIFMMQFLWRYVDEMVGKGLEMTVLAQFFFYSALSLVPASLPLAILLAALI 62 Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAK 135 + ELL + G S + +++P++ + F +N+I PK ++ + L Sbjct: 63 TFGNFGERFELLAMKAAGISLLKIMRPLIIFICFICCVSFYFQNVIGPKAQTKLWTLLIS 122 Query: 136 AQLALTFSYLEENLFFRLDD--DLYIKISKYNPNNTLQGIFIVD-SRDTQTHKIYYAQSG 192 + + E +F+ D +LY+K K L + I + + + +I + SG Sbjct: 123 MKQKSPEVDIPEGVFYDEIDGYNLYVK-HKNRKTGMLYDVLIYNFEKGFENAQIIKSDSG 181 Query: 193 SIDL--DRQAIILN--DGEV---------------HRKSPISKDISIMKFKS------YT 227 +++ D+Q + L+ GE +R+ + +I++F S Sbjct: 182 RLEMTADKQHLYLHLYSGEQFENLKSQNMNQRNVPYRRETFREKHAIIEFNSDFNMVDAG 241 Query: 228 LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYR--SEFHKRLTQWLFPVIF 285 + + +NS + + D + L N + Y+ + TY+ + K T + Sbjct: 242 IMSNQSNSKDMRMLQADIDSMKLQNDSVGRGYYKEAMAGTYKVTASLSKEDTLKIEKAYL 301 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGF 322 G ++ + A + Q++K+ +S + S G W F Sbjct: 302 GEYNVDSLYNVATLMQKQKVISTAVSRAESAGSDWSF 338 >gi|160881617|ref|YP_001560585.1| hypothetical protein Cphy_3495 [Clostridium phytofermentans ISDg] gi|160430283|gb|ABX43846.1| conserved hypothetical protein [Clostridium phytofermentans ISDg] Length = 617 Score = 36.2 bits (82), Expect = 8.4, Method: Compositional matrix adjust. Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 10/108 (9%) Query: 215 SKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFL--------LNPNPNNPNYRPELLE 266 +IS+ + K+YT Q+ S +S ++L ++ L NP N ++ P Sbjct: 14 GDNISMTRKKTYTYQSRSNTNSVLLLFPLFLIITILPLIVSIHSFNPGLNQFDWYPN--T 71 Query: 267 TYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSI 314 ++F QW F I GL +++ + L ++ K H IFI L I Sbjct: 72 DLANDFFLYYKQWFFVFISGLCALILVIRAFLNKKEVKFHKIFIPLVI 119 >gi|254372627|ref|ZP_04988116.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. novicida GA99-3549] gi|151570354|gb|EDN36008.1| permease YjgP/YjgQ family protein [Francisella novicida GA99-3549] Length = 353 Score = 36.2 bits (82), Expect = 8.4, Method: Compositional matrix adjust. Identities = 35/163 (21%), Positives = 70/163 (42%), Gaps = 19/163 (11%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 +P +L + P C + L+ + N+E++++ + G S + K V+ + ++ S+ + Sbjct: 58 LPGILYTLLPACAMVGALMGLSLLANNSEIIVLRSFGRSTAQIAKGVILVGLIGSVTTMV 117 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFI 175 I P + +Q+ +Y +L+F+ D ++ IS P GI Sbjct: 118 FGGYIAPILQ---RQVDTN-----MVTYNTHDLWFKTPDG-FMNISNIEPTQGKAYGIRK 168 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILN---------DGEVH 209 +D + +I YA+S + D A + N DG+ H Sbjct: 169 FMVQDNKVREIRYAESATYINDASANVFNIRKIIFPASDGQKH 211 >gi|332707452|ref|ZP_08427501.1| putative permease [Lyngbya majuscula 3L] gi|332353803|gb|EGJ33294.1| putative permease [Lyngbya majuscula 3L] Length = 388 Score = 36.2 bits (82), Expect = 8.5, Method: Compositional matrix adjust. Identities = 43/208 (20%), Positives = 89/208 (42%), Gaps = 15/208 (7%) Query: 37 NLVSSSTES---LNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTG 93 LV TE+ L I L++ IP + P + + ++ ++EL+ + + G Sbjct: 50 ELVRKVTEAGLPLGIALQVLLLQIPQFISYALPMSMLLAALMAYSRLSSDSELIAMRSFG 109 Query: 94 TSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFF-- 151 S L+ P + +++L++ F+ ++ P K KA S+ E N+F+ Sbjct: 110 VSIYRLVIPAVVVSLLVTSLTFVFNELVVPAANYQSKITLDKALKKERPSFQERNIFYPE 169 Query: 152 ----RLDDDLYI-KISKY-----NPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAI 201 +L + + KI ++ ++G+ I+D T +I ++S + Sbjct: 170 YQKVKLPNGKKVNKIKRWFYAEQFDGKQMRGLTILDFSQTGLEQIVTSESAVWNPTENLW 229 Query: 202 ILNDGEVHRKSPISKDISIMKFKSYTLQ 229 DG ++ SP + +I++F+ LQ Sbjct: 230 DFLDGTIYIISPDASYRNILRFQKQKLQ 257 >gi|300871686|ref|YP_003786559.1| permease YjgP/YjgQ family protein [Brachyspira pilosicoli 95/1000] gi|300689387|gb|ADK32058.1| permease YjgP/YjgQ family protein [Brachyspira pilosicoli 95/1000] Length = 431 Score = 36.2 bits (82), Expect = 8.7, Method: Compositional matrix adjust. Identities = 48/202 (23%), Positives = 90/202 (44%), Gaps = 21/202 (10%) Query: 1 MKSFELYI-LRCIGRSFLMSCLFIVFIAWVIQILQRI-NLVSSSTESLNILLKISGYLIP 58 MK + YI L IG F+ LF FI +VIQ+L + L+ ++ + L+I Y++P Sbjct: 1 MKKIKKYIILEAIG-PFIAGVLFFTFI-FVIQLLPELFKLILNNGAPIWTSLEIFVYMLP 58 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P M ++ + E++++ G S + + P++ L +F Sbjct: 59 FNVAITIPMSILMAGIMGYGRLSSDNEIIVMRALGFSHMRIYAPIIILGFFTFLFSLFFN 118 Query: 119 NIIEPKCRSTIKQL--------SAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTL 170 N++ + + L + A L F+Y+ D +L I + Y+ NN + Sbjct: 119 NVVMTESNYRYRALFSYIINIRPSIAVGKLEFAYIS-------DINLSIG-AYYSDNNGM 170 Query: 171 QGIFIVDSRDTQTHKIYYAQSG 192 + I D ++Q +I A+SG Sbjct: 171 SNVVIYDG-NSQARRIITAKSG 191 >gi|170725440|ref|YP_001759466.1| permease YjgP/YjgQ family protein [Shewanella woodyi ATCC 51908] gi|169810787|gb|ACA85371.1| permease YjgP/YjgQ family protein [Shewanella woodyi ATCC 51908] Length = 352 Score = 36.2 bits (82), Expect = 8.8, Method: Compositional matrix adjust. Identities = 47/264 (17%), Positives = 109/264 (41%), Gaps = 17/264 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + YI R + + + L + ++ +I+ + ++ +V + ++ +LIP Sbjct: 1 MRILDFYIARTLVSTSALCLLILTGLSGIIKWVDQLRVVGRGSYTMLDAGIYVLFLIPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + + N+EL+++ + G SR+ + + A+ L + + Sbjct: 61 IEMFFPMAVLLGALIGMGMLASNSELVVMQSAGLSRLQITLSAMKTAVPLMLIIMALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SR 179 P +L A + ++ + D DL++ I + N L+ I + + Sbjct: 121 GAPAAEQKAYELQATKISGGSLIKSSRGIWAK-DGDLFVNIGEVEDINNLRNITLYKFNS 179 Query: 180 DTQTHKIYYAQSG-------------SIDLDRQAIILNDGEVHR-KSPISKD-ISIMKFK 224 D + +A+ G DL + + L D ++R +S ++ D +S++ K Sbjct: 180 DLALTRTIHAERGVFSKDHWRLLDVRQTDLTDERVTLTDLTLYRWESTLTPDKLSVVSVK 239 Query: 225 SYTLQTESANSSTIVLKANDQNLS 248 +L + L+ N+Q+ S Sbjct: 240 PESLSIQGLIGYLDYLEVNNQDAS 263 >gi|242279362|ref|YP_002991491.1| permease YjgP/YjgQ family protein [Desulfovibrio salexigens DSM 2638] gi|242122256|gb|ACS79952.1| permease YjgP/YjgQ family protein [Desulfovibrio salexigens DSM 2638] Length = 386 Score = 36.2 bits (82), Expect = 9.0, Method: Compositional matrix adjust. Identities = 68/330 (20%), Positives = 132/330 (40%), Gaps = 54/330 (16%) Query: 55 YLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLI-KPVLFLAILLSIF 113 YL P L M+TP + MN + E+ + + G S L+ P++F + Sbjct: 55 YLCPFFLLMLTPIATMLSIFLTFLRMNADNEITALKSGGLSLYRLLPAPIIFCLLCTGAD 114 Query: 114 LFIS--------ENIIEPKCRSTIKQLS-AKAQLALTFSYLEEN---LFFRLDDDLYIKI 161 + S EN R+ + + + ++QLA+ +N L F D Sbjct: 115 FYFSLYGLSWGTENF-----RNALMEFARTQSQLAIQPGVFNKNFPGLVFYAD------- 162 Query: 162 SKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLD----RQAIILNDGEVHRKSPISKD 217 + ++ +F+ D+ A G I D R I L +G+++++ Sbjct: 163 GVDEKSGIMRSVFVRDNTRKGMTATIVAPLGEIRTDPKMGRLLIHLENGKIYQQE--KDQ 220 Query: 218 ISIMKFKSYTLQTESANSSTIVLKAND-----------QNLSFLLNPNPNNPNYRPELLE 266 +S++KFK+Y ++ AN +LK D + L + + P + Sbjct: 221 LSVLKFKNYDVRIPLAN----ILKGYDVDELRPKEMSWKKLVRISRAGDRAGDIDPGFFK 276 Query: 267 TYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYII 326 + E KRL + ++ G+ ++ A + R K+ + + IS+ + F V++ + Sbjct: 277 KVQVEVQKRLALPVACLVLGMFAVPIA---CIFRGLKQQYGLIISMGL-FLVYYTMLSLG 332 Query: 327 HKIEQNPYYIPILYLFL----FCISSIFLL 352 ++ P++ L+L F I S+ LL Sbjct: 333 VTFGESGVLTPVIGLWLPNITFAIISVVLL 362 >gi|15834847|ref|NP_296606.1| hypothetical protein TC0227 [Chlamydia muridarum Nigg] gi|270285013|ref|ZP_06194407.1| hypothetical protein CmurN_01133 [Chlamydia muridarum Nigg] gi|270289036|ref|ZP_06195338.1| hypothetical protein CmurW_01188 [Chlamydia muridarum Weiss] gi|301336411|ref|ZP_07224613.1| hypothetical protein CmurM_01210 [Chlamydia muridarum MopnTet14] gi|7190266|gb|AAF39099.1| conserved hypothetical protein [Chlamydia muridarum Nigg] Length = 354 Score = 36.2 bits (82), Expect = 9.0, Method: Compositional matrix adjust. Identities = 35/184 (19%), Positives = 85/184 (46%), Gaps = 6/184 (3%) Query: 49 LLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAI 108 + +++ Y IP +LP + P + + ++ N ++ + +G S+ +I P+L + Sbjct: 48 VFRVTAYQIPYLLPFILPASCFISAFTLFRKLSDNNQITFLKASGASQGMIIFPILITSG 107 Query: 109 LLSIFLFISENIIEPKCR-STIKQLSAKAQLALTF-SYLEENLFFRLDDDLYIKISKYNP 166 +L F F + + + CR T K++ A +A+T + L + L + +D ++I I + Sbjct: 108 ILCCFNFYTCSELASICRFQTGKEI---ANIAMTSPALLLQTLQKKENDRIFIAID-HCG 163 Query: 167 NNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSY 226 + + I + + I + ++ D+++ ++ + V K P+ + + Sbjct: 164 KSKFDNVIIALKHNQEISNIGFVETIIPDVNKDSVQAKNVLVISKVPLFSEARTSNPNEF 223 Query: 227 TLQT 230 L+T Sbjct: 224 YLET 227 >gi|300718541|ref|YP_003743344.1| permease [Erwinia billingiae Eb661] gi|299064377|emb|CAX61497.1| putative permease [Erwinia billingiae Eb661] Length = 366 Score = 36.2 bits (82), Expect = 9.1, Method: Compositional matrix adjust. Identities = 41/226 (18%), Positives = 83/226 (36%), Gaps = 17/226 (7%) Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 P + ++ P + L + +E+ ++ G S+ L+K + L + +I ++ Sbjct: 57 PEMAQLILPLSLFLAILMTLGRLYTESEITVMHACGLSKAVLVKAAMVLMLFTAIVAAVN 116 Query: 118 ENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD 177 + P +++ A+ + L F + D + + N +F+ Sbjct: 117 VAWLGPWSSRYQSEVTQNAKANPGAAALAAGQFQQSGDGQSVMFIENVKGNNFGNVFLAQ 176 Query: 178 SRDTQTHK--IYYAQSGSIDLD---RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 R + + A G + Q + L+ G + + +D I F++Y Sbjct: 177 LRPKGNARPSVVLADKGHMTQGPDGSQIVTLDKGTRFEGTAMLRDFRITDFENYQ---AI 233 Query: 233 ANSSTIVLKAND-QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLT 277 +VL ND + + F + P +R SEFH RLT Sbjct: 234 VGHQDVVLDPNDAEQMDFKTLAQSDKPEFR--------SEFHWRLT 271 >gi|312968689|ref|ZP_07782898.1| conserved hypothetical protein [Escherichia coli 2362-75] gi|312286907|gb|EFR14818.1| conserved hypothetical protein [Escherichia coli 2362-75] Length = 359 Score = 35.8 bits (81), Expect = 9.8, Method: Compositional matrix adjust. Identities = 47/221 (21%), Positives = 89/221 (40%), Gaps = 15/221 (6%) Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS--RITLIKPVLFLAILLSIFL 114 +P L ++PF + L +++N+EL I +TG S RI L+ L IL ++ L Sbjct: 57 LPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALV--ALVAGILWTVSL 114 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF 174 + + + Q+ + A + N+ + + ++ + N + Sbjct: 115 GAIDEWVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVDVE 174 Query: 175 IVDSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK--------FKS 225 I RD + + Y YA+S +I+ D+ I+ G H+K K+ F S Sbjct: 175 IFHYRDDLSLESYIYARSATIEDDKTWIL--HGVNHKKWLNGKETQETSDYLAWQSTFTS 232 Query: 226 YTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLE 266 L+ S +T ++ + + +L + YR L E Sbjct: 233 MNLEELSMPGNTFSVRQLNHYIHYLQETGQPSSEYRLALWE 273 Searching..................................................done Results from round 2 >gi|255764468|ref|YP_003064806.2| permease protein [Candidatus Liberibacter asiaticus str. psy62] gi|254547819|gb|ACT56866.2| permease protein [Candidatus Liberibacter asiaticus str. psy62] Length = 361 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 361/361 (100%), Positives = 361/361 (100%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV Sbjct: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI Sbjct: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD Sbjct: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL Sbjct: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR Sbjct: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK Sbjct: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 Query: 361 I 361 I Sbjct: 361 I 361 >gi|150395989|ref|YP_001326456.1| permease YjgP/YjgQ family protein [Sinorhizobium medicae WSM419] gi|150027504|gb|ABR59621.1| permease YjgP/YjgQ family protein [Sinorhizobium medicae WSM419] Length = 390 Score = 328 bits (842), Expect = 6e-88, Method: Composition-based stats. Identities = 116/360 (32%), Positives = 209/360 (58%), Gaps = 5/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI R FL + L ++ I W Q L +NLV+ S +S+ LK++ ++P+V Sbjct: 1 MKLIERYIFRRATIMFLATLLPLMGIVWTTQALANVNLVTDSGQSIIAFLKLATLILPSV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P++ PF + T L++MN ++EL ++ G+SR+++I+PV+FLA LS+ F +N Sbjct: 61 VPIILPFALVIGVTQTLSAMNTDSELTVLSAAGSSRMSIIRPVMFLAAGLSVLSFTIDNF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R +++++ A A L S ++EN F ++ D LY+++ L GIF+ D+RD Sbjct: 121 VEPYSRVSVRKMIATAHADLLASVVQENAFRKITDGLYVQVGARRSGGVLHGIFVADARD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE--SANSSTI 238 +YYA+ G++D R A+++ DGEVHRK P D+SI+KF SY + + Sbjct: 181 PNFELVYYAREGAVDEGRSALVMKDGEVHRKLPD-GDVSIIKFDSYAFDLTDLTRMTGEA 239 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 ++A D++L +LL+P+P++ Y+ + +E H+R T+W FP++FGLI++VA+ Sbjct: 240 NIRAKDRDLFYLLDPDPDDEAYK-RAPRAFAAELHRRFTEWTFPLLFGLIALVASSDAR- 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + ++HP+ +L + + W Y + E + +++P++YL ++ + + Sbjct: 298 SHREARVHPMVSALGAALVIRWMTFYAANSAEDSVWFVPLMYLIPLATGALAIQQLASNR 357 >gi|190891136|ref|YP_001977678.1| permease [Rhizobium etli CIAT 652] gi|190696415|gb|ACE90500.1| putative permease protein [Rhizobium etli CIAT 652] Length = 403 Score = 328 bits (841), Expect = 9e-88, Method: Composition-based stats. Identities = 133/361 (36%), Positives = 221/361 (61%), Gaps = 7/361 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YILR +G+ FL++ L ++ I W Q+LQRINLV+ S +S+ K++ ++P++ Sbjct: 11 MKLLETYILRRVGQMFLVALLPVLAIIWTTQVLQRINLVTDSGQSIGSFAKLATMILPSI 70 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T LT+MN ++EL +ID G R L++P+L LA ++S+F F +NI Sbjct: 71 IPVVLPFALVIAITQTLTTMNNDSELTVIDAAGARRSILVRPILLLAAVISVFSFFVDNI 130 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP+ ++ +Q+ A+ L S +EE F ++D+ LY++ISK L+G+F+ D RD Sbjct: 131 VEPRAKTVARQMIAETYADLLSSVIEEKTFRKIDEGLYVQISKRLAGRMLKGLFVADERD 190 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE--SANSSTI 238 IYYA+ G++D +I++DGEVHRK+P ++S++ F SY+ + + Sbjct: 191 PAYELIYYAKEGAVDDSGTTLIMHDGEVHRKTPD-GNVSVINFDSYSFDLSDMTESRGQA 249 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 LKA+D++L FL NP+PN+ +Y ++YR+E H+RLT W+ PV+F L S+ A Sbjct: 250 TLKASDRDLWFLFNPDPNDKDYTIR-PQSYRAELHRRLTDWILPVVFALFSLAIAGDAR- 307 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC--ISSIFLLMIKK 356 + ++HP+ +L+ +F + W Y ++I+ +P YI +LY I SI L + K Sbjct: 308 SHREARLHPMVSALAYAFALRWAAFYAANQIDTDPEYIAVLYGLPIVSSIVSIIFLSLHK 367 Query: 357 K 357 + Sbjct: 368 R 368 >gi|86357092|ref|YP_468984.1| putative permease protein [Rhizobium etli CFN 42] gi|86281194|gb|ABC90257.1| putative permease protein [Rhizobium etli CFN 42] Length = 393 Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats. Identities = 129/356 (36%), Positives = 218/356 (61%), Gaps = 5/356 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YILR +G+ FL++ L ++ I W Q+LQRINLV+ S +S+ K++ ++P++ Sbjct: 1 MKLLETYILRRVGQMFLVALLPVLAIIWTTQVLQRINLVTDSGQSIGSFAKLATMILPSI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T LT+MN ++EL +ID G R L++P+L LA ++S+F F +NI Sbjct: 61 IPVVLPFALVIAITQTLTTMNNDSELTVIDAAGARRTILVRPILLLAAVISVFSFFVDNI 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP+ ++ +Q+ A+ L S +EE F +LD+ LY++IS+ L+G+F+ D RD Sbjct: 121 VEPRAKTVARQMIAETYADLLSSVIEEKTFRKLDEGLYVQISQRLAGRMLKGLFVADERD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE--SANSSTI 238 IYYA+ G++D +I++DGEVHRK+P ++S++ F SY+ + + Sbjct: 181 PAYELIYYAKEGAVDDTGTTLIMHDGEVHRKTPD-GNVSVINFDSYSFDLSDMTESRGQA 239 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 LKA+D++L FL NP+PN+ +Y ++YR+E H+RLT W+ PV+F L S+ A Sbjct: 240 TLKASDRDLWFLFNPDPNDKDYTIR-PQSYRAELHRRLTDWILPVVFALFSLAIAGDAR- 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + ++HP+ +L +F + W Y ++I+ +P YI +LY S + ++ + Sbjct: 298 SHREARLHPMVSALGYAFALRWAAFYAANQIDTDPEYIAVLYALPIVSSIVSIIFL 353 >gi|241203949|ref|YP_002975045.1| permease YjgP/YjgQ family protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857839|gb|ACS55506.1| permease YjgP/YjgQ family protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 393 Score = 326 bits (835), Expect = 4e-87, Method: Composition-based stats. Identities = 128/356 (35%), Positives = 219/356 (61%), Gaps = 5/356 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YILR +G+ FL++ L ++ I W Q+LQRINLV+ S +S+ K++ ++P++ Sbjct: 1 MKLLETYILRRVGQMFLVALLPVLAIIWTTQVLQRINLVTDSGQSIGSFAKLATMILPSI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T LT+MN ++EL +ID G R LI+P+L LA +S+F F +N+ Sbjct: 61 IPVVLPFALVIAITQTLTTMNNDSELTVIDAAGARRSVLIRPILLLAAAISVFSFFVDNV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP+ ++ ++Q+ A+ L S +EE F +LD+ LY++ISK L+G+F+ D RD Sbjct: 121 VEPRAKTVVRQMIAETYADLLSSVIEEKTFRKLDEGLYVQISKRMAGRMLKGLFVADERD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE--SANSSTI 238 IYYA+ G++D +I+++GEVHRK+P ++S++ F SY+ + N Sbjct: 181 PAYELIYYAKEGAVDDTGTTLIMHEGEVHRKTPD-GNVSVINFDSYSFDLSDMTENRGQA 239 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 L+A+D++L FL+NP+P + +Y ++YR+E H+RLT W+ PV+F L S+ A Sbjct: 240 TLRASDRDLWFLINPDPADKDYTIR-PQSYRAELHRRLTDWILPVVFALFSLAIAGDAR- 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + ++HP+ +L+ +F + W Y ++I+ +P YI +LY S + ++ + Sbjct: 298 SHREARLHPMVSALAYAFAMRWAAFYAANQIDTDPEYIAVLYAIPIVSSIVSIVFL 353 >gi|15964907|ref|NP_385260.1| hypothetical protein SMc00584 [Sinorhizobium meliloti 1021] gi|307300977|ref|ZP_07580746.1| permease YjgP/YjgQ family protein [Sinorhizobium meliloti BL225C] gi|307317712|ref|ZP_07597150.1| permease YjgP/YjgQ family protein [Sinorhizobium meliloti AK83] gi|15074086|emb|CAC45733.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021] gi|306896474|gb|EFN27222.1| permease YjgP/YjgQ family protein [Sinorhizobium meliloti AK83] gi|306903932|gb|EFN34518.1| permease YjgP/YjgQ family protein [Sinorhizobium meliloti BL225C] Length = 390 Score = 326 bits (835), Expect = 5e-87, Method: Composition-based stats. Identities = 117/360 (32%), Positives = 210/360 (58%), Gaps = 5/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI R FL + L ++ I W Q L +NLV+ S +S+ LK++ ++P+V Sbjct: 1 MKLIERYIFRRATIMFLATLLPLMGIVWTTQALTNVNLVTDSGQSIIAFLKLATLILPSV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P++ PF + T L++MN ++EL ++ G+SR+++I+PV+FLA LS+ F +N Sbjct: 61 VPIILPFALVIGVTQTLSAMNTDSELTVLSAAGSSRMSIIRPVMFLAAGLSVLSFAIDNF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R ++++ A A L S ++EN F ++ D LY+++ LQGIF+ D+RD Sbjct: 121 VEPYSRVAVRKMIATAHADLLASVVQENAFRKITDGLYVQVGARRSGGVLQGIFVADARD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE--SANSSTI 238 +YYA+ G++D +R A+++ DGEVHRK P D+SI+KF SY + + Sbjct: 181 PNFELVYYAREGAVDEERSALVMKDGEVHRKLPD-GDVSIIKFDSYAFDLTDLTRMAGEA 239 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 ++A D++L +LL+P+P++ Y+ L + +E H+R T+W FP++FGLI++V + Sbjct: 240 NIRAKDRDLFYLLDPDPDDEAYKRAPL-AFTAELHRRFTEWTFPLLFGLIALVVSSDAR- 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + ++HP+ +L + + W Y + E + +++P++YL ++ + + Sbjct: 298 SHREARVHPMVSALGAALVIRWMTFYAANSAEDSVWFVPLMYLVPLVTGALAIQQLASNR 357 >gi|240850232|ref|YP_002971625.1| putative permease, YjgP/YjgQ family [Bartonella grahamii as4aup] gi|240267355|gb|ACS50943.1| putative permease, YjgP/YjgQ family [Bartonella grahamii as4aup] Length = 396 Score = 325 bits (834), Expect = 6e-87, Method: Composition-based stats. Identities = 123/362 (33%), Positives = 213/362 (58%), Gaps = 6/362 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ E YIL+ + F + V ++W +QIL RIN +++S ++L +L+ S L+P+V Sbjct: 1 MRIIEFYILKRVLVLFSSVMIAAVGVSWTVQILARINFLTTSKQTLLTVLQFSLSLVPSV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V PF + T +L++M++++EL +I+ +G + T+ KP+L LAI+ S F N Sbjct: 61 VFLVIPFALVIAITTILSAMHQDSELAVINASGFPKSTVWKPILLLAIVASCISFSIANF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ R ++Q+ A A L ++ E F +L ++LYI+I + NPN TL+ +FI D RD Sbjct: 121 VVPQARLHMRQMLASAHFDLINLFINEGSFQKLANNLYIEIGERNPNGTLERLFIADQRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 +T YYA SI ++ ++LN+GE+ R + + +SI++F SYT + Sbjct: 181 PKTDLFYYATDASIVSNKNGSFLVLNNGEIERVNHQNNSVSIVQFSSYTFSLGEFIPSDK 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 L D++LS+L NP+P +P Y+ + L+ Y++EFH+RLTQWL+P++F LI++ AA Sbjct: 241 APTLYPKDRSLSYLQNPDPKDPYYQRKPLQ-YKAEFHRRLTQWLYPIVFSLIALAAAGDV 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 RQ + F ++++SF V+W + K + + YIP+LY+ S+ M+ Sbjct: 300 CSHRQARH-SANFSAIALSFLVYWIGYFFAEKAKNDLAYIPLLYIMPIGTSAFVFFMLLT 358 Query: 357 KY 358 + Sbjct: 359 NH 360 >gi|227821476|ref|YP_002825446.1| putative permease protein [Sinorhizobium fredii NGR234] gi|227340475|gb|ACP24693.1| putative permease protein [Sinorhizobium fredii NGR234] Length = 390 Score = 324 bits (832), Expect = 9e-87, Method: Composition-based stats. Identities = 113/360 (31%), Positives = 213/360 (59%), Gaps = 5/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI R FL + L ++ I W Q L +NLV+ S +S+ LK++ ++P+V Sbjct: 1 MKLIERYIFRRATIMFLATLLPLLGIVWTTQALSNVNLVTDSGQSIFAFLKLATLILPSV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P++ PF + T L+ MN ++EL +++ G+SR+++I+PV++LA+ LS+ F+ +N Sbjct: 61 VPIILPFALLIGVTQTLSVMNTDSELTVLNAAGSSRMSVIRPVIYLAVGLSVLSFVIDNF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R ++++ A A L S ++EN F R+ D LY++++ L GIF+ DSR+ Sbjct: 121 VEPYSRVAVRKMIATAHADLLSSVVQENAFRRITDGLYVQVAARRSGGVLHGIFVADSRN 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE--SANSSTI 238 +YYA+ G++D +R A+++ DGEVHRK P +S++KF SY + + Sbjct: 181 PNFELVYYAREGAVDEERSALVMKDGEVHRKLPDGG-VSVIKFDSYAFDLTDMTRTAGEA 239 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 ++A D++L +L++P+PN+P+Y+ L + +E H+RL++W +P++FGLI++V + Sbjct: 240 TIRAKDRDLFYLIDPDPNDPSYKRSPL-AFTAELHRRLSEWTYPLLFGLIALVVSSDAR- 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + ++HP ++ + + W Y + E + +++P++YL ++ + + Sbjct: 298 SHREARVHPTISAVGAALVIRWMTFYAGNSAEDSIWFVPLMYLVPLMTGALAIRQLASNR 357 >gi|116251335|ref|YP_767173.1| hypothetical protein RL1569 [Rhizobium leguminosarum bv. viciae 3841] gi|115255983|emb|CAK07064.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae 3841] Length = 393 Score = 323 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 126/356 (35%), Positives = 218/356 (61%), Gaps = 5/356 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YILR +G+ FL++ L ++ I W Q+LQRINLV+ S +S+ K++ ++P++ Sbjct: 1 MKLLETYILRRVGQMFLVALLPVLAIIWTTQVLQRINLVTDSGQSIGSFAKLATMILPSI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T LT+MN ++EL +ID G R LI+P+L LA ++S+F F +N+ Sbjct: 61 IPVVLPFALVIAITQTLTTMNNDSELTVIDAAGARRSVLIRPILLLAAVISVFSFFVDNV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP+ ++ ++Q+ A+ L S +EE F +LD+ LY++IS+ L+G+F+ D RD Sbjct: 121 VEPRAKTVVRQMIAETYADLLSSVIEEKTFRKLDEGLYVQISQRMAGRMLKGLFVADERD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE--SANSSTI 238 IYYA+ G++D +I++ GEVHRK+P ++S++ F SY+ + + Sbjct: 181 PAYELIYYAKEGAVDDTGTTLIMHQGEVHRKTPD-GNVSVINFDSYSFDLSDMTESRGQA 239 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 L+A+D++L FL NP+P + +Y ++YR+E H+RLT W+ PV+F L S+ A Sbjct: 240 TLRASDRDLWFLFNPDPADKDYTIR-PQSYRAELHRRLTDWILPVVFALFSLAIAGDAR- 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + ++HP+ +L+ +F + W Y ++I+ +P YI +LY S + ++ + Sbjct: 298 SHREARLHPMVSALAYAFAMRWAAFYAANQIDTDPEYIAVLYAIPIVSSIVSIVFL 353 >gi|222085453|ref|YP_002543983.1| permease protein [Agrobacterium radiobacter K84] gi|221722901|gb|ACM26057.1| permease protein [Agrobacterium radiobacter K84] Length = 391 Score = 323 bits (827), Expect = 4e-86, Method: Composition-based stats. Identities = 138/363 (38%), Positives = 226/363 (62%), Gaps = 7/363 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK FE YI+R +G FL++ L ++ I W Q+LQRINLV+ S +S+ K++ ++PT+ Sbjct: 1 MKLFETYIVRRVGMMFLVALLPVLAIIWTTQVLQRINLVTDSGQSIGSFAKLATLILPTI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T LT+MN ++EL +++ G R +I+P++ LAI +S+F F +N+ Sbjct: 61 IPVVLPFALVIGITQTLTAMNSDSELTVMEAAGARRSIIIRPIMILAIAISVFSFFVDNM 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EPK R +Q+ A+A L + +EE F R++D LY++I++ L+G+F+VDSRD Sbjct: 121 VEPKARVAARQMVAEAYADLLSTVIEEKNFRRIEDGLYVQITQRMSGRILKGLFVVDSRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE--SANSSTI 238 IYYA+ G++D ++++ DGEVHRK+ D+S++KF SY+ + + Sbjct: 181 PAFDLIYYAKEGAVDASGSSLLMRDGEVHRKTSD-GDVSVIKFDSYSFDLSDMTQSRGQA 239 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 L+A D++L FLLNP+PN+ +Y+ + YRSE H+RLT W P IF LIS+V A Sbjct: 240 TLRAGDRSLGFLLNPDPNDADYKAKPSG-YRSELHRRLTDWALPAIFALISLVIAGDAR- 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCIS--SIFLLMIKK 356 + ++HP+ +L+I+F + W Y ++IE PY++ ILY + +IFLL + Sbjct: 298 SHREARLHPMVSALTIAFALRWADFYAANQIETAPYFVGILYGINIAATLIAIFLLFRNR 357 Query: 357 KYT 359 + + Sbjct: 358 RMS 360 >gi|209548671|ref|YP_002280588.1| permease YjgP/YjgQ family protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534427|gb|ACI54362.1| permease YjgP/YjgQ family protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 393 Score = 322 bits (826), Expect = 5e-86, Method: Composition-based stats. Identities = 128/342 (37%), Positives = 215/342 (62%), Gaps = 5/342 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YILR +G+ FL++ L ++ I W Q+LQRINLV+ S +S+ K++ ++P++ Sbjct: 1 MKLLETYILRRVGQMFLVALLPVLAIIWTTQVLQRINLVTDSGQSIGSFAKLATMILPSI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T LT+MN ++EL +ID G R LI+P+L LA ++S+F F +N+ Sbjct: 61 IPVVLPFALVIAITQTLTTMNNDSELTVIDAAGARRSVLIRPILLLAAVVSVFSFFVDNV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP+ ++ ++Q+ A+ L S +EE F +LD+ LY++ISK L+G+F+ D RD Sbjct: 121 VEPRAKTVVRQMIAETYADLLSSVIEEKTFRKLDEGLYVQISKRMAGRMLKGLFVADERD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE--SANSSTI 238 IYYA+ G++D +I+++GEVHRK+P ++S++ F SY+ + N Sbjct: 181 PAYELIYYAKEGAVDDTGTTLIMHEGEVHRKTPD-GNVSVINFDSYSFDLSDMTENRGQA 239 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 L+A+D++L FLLNP+P + +Y ++YR+E H+RLT W+ PV+F L S+ A Sbjct: 240 TLRASDRDLWFLLNPDPADKDYTIR-PQSYRAELHRRLTDWILPVVFALFSLAIAGDAR- 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY 340 + ++HP+ +L+ +F + W Y ++I+ +P YI +LY Sbjct: 298 SHREARLHPMVSALAYAFALRWAAFYAANQIDTDPEYIAVLY 339 >gi|222148153|ref|YP_002549110.1| hypothetical protein Avi_1543 [Agrobacterium vitis S4] gi|221735141|gb|ACM36104.1| conserved hypothetical protein [Agrobacterium vitis S4] Length = 399 Score = 322 bits (825), Expect = 7e-86, Method: Composition-based stats. Identities = 121/359 (33%), Positives = 209/359 (58%), Gaps = 5/359 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YILR + + FL + L ++ I W Q+L RINLV+ + +S+ ++ ++PT+ Sbjct: 6 MKLLESYILRRVAQMFLTALLPVLAIIWTTQVLARINLVTDTGQSIGSFATLATLILPTI 65 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T LT+MN ++EL +ID G SR +++P+L A+ +S+ + N Sbjct: 66 IPIVMPFALVIGITQSLTAMNNDSELAVIDAAGASRAVILRPILLFALAISVITLVITNE 125 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 ++PK + +Q+ A A L + +EE F +++D LY++IS+ L+G+F+ D RD Sbjct: 126 VQPKVKVAARQMIANAYADLLSTVIEEKTFRKVEDGLYVQISQRLAGRVLKGLFVADYRD 185 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST--I 238 IYYA+ G++D A+I++DGEV RK+P +SI++F SY + Sbjct: 186 PAYSLIYYAREGAVDETGTALIMHDGEVQRKAPG-GTVSIVRFDSYAFDLSDLTETRGKA 244 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 ++ +D++LSFLLNP+ N+ +Y+ YR+E HKR+T+WL P F LIS+ A Sbjct: 245 KMRPSDRSLSFLLNPDTNDDDYKDH-PGEYRAELHKRMTEWLLPFAFALISLAIAGDAR- 302 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++HP+ +L+++ + W Y +K E N +I ++Y ++I LM+ ++ Sbjct: 303 SHREARLHPMVSALTLALVLRWLTFYAANKSESNAAFIVLMYATPLASAAIATLMLMRQ 361 >gi|163868028|ref|YP_001609232.1| hypothetical protein Btr_0827 [Bartonella tribocorum CIP 105476] gi|161017679|emb|CAK01237.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476] Length = 396 Score = 321 bits (824), Expect = 7e-86, Method: Composition-based stats. Identities = 125/362 (34%), Positives = 211/362 (58%), Gaps = 6/362 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ E YIL+ + F + V ++W +QIL RIN +++S ++L +L+ S L+P+V Sbjct: 1 MRIIEFYILKRVFFLFSSVLIAAVGVSWTVQILARINFLTTSKQTLLTVLQFSLSLVPSV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V PF + T L++MN+ +EL +I+ +G + T+ KPVL LAI+ S F N Sbjct: 61 IFLVIPFALVIAVTTTLSAMNQESELAVINASGFPKSTVWKPVLLLAIVASCISFSIANF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ R ++Q+ A A L ++ E F +L ++LYI+I + NPN TL+ +FI D RD Sbjct: 121 VVPQARLHMRQMLASAHFDLINLFISEGSFQKLANNLYIEIGERNPNGTLERLFIADQRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 +T YYA SI ++ +ILN+GE+ R + + +SI++F +YT + Sbjct: 181 PKTDLFYYATKASIVSNKNGRFLILNNGEIERVNHENNSVSIVQFSAYTFSLGEFIPSDK 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 T L D++LS+L NP+P +P Y+ + L+ Y++EFH+RLTQWL+P++F LI++ AA Sbjct: 241 TPTLYPKDRSLSYLQNPDPKDPYYQRKPLQ-YKAEFHRRLTQWLYPIVFSLIALAAAGNV 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 RQ + F ++++SF V+W + K + + Y+P+LY+ S M+ Sbjct: 300 GSHRQARYCA-NFSAIALSFLVYWIGYFFAEKAKNDLAYVPLLYITPIGTSLFVFFMLLT 358 Query: 357 KY 358 + Sbjct: 359 NH 360 >gi|319404056|emb|CBI77644.1| putative permease, YjgP/YjgQ family [Bartonella rochalimae ATCC BAA-1498] Length = 382 Score = 319 bits (818), Expect = 4e-85, Method: Composition-based stats. Identities = 131/362 (36%), Positives = 206/362 (56%), Gaps = 6/362 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ FELYIL+ I F L V I+W +QIL R+N ++++ ++ +L S LIP+V Sbjct: 1 MRIFELYILKRIFILFSAVLLGAVGISWTVQILARVNFLTTNGQTFLTILYFSSLLIPSV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ PF + T +L +MN+++EL +I +G S+ + KP+L LAIL S F N Sbjct: 61 TSLIMPFALVVAITTILLTMNQDSELAVISASGISKNIVWKPILLLAILASFTSFSITNF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P R ++Q+ A + L ++ E F L +LYI+I + N N T+ +FI D RD Sbjct: 121 IAPHARLNMRQILASSHSDLISLFIREGSFQELTKNLYIEIGERNANGTIGRLFIADQRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 Q YYA G+I +++ +ILNDGE+ R + ++SI+KF S+T N Sbjct: 181 PQLGLFYYATKGAIVNNKKGKFLILNDGEIERIDYKNDNVSIIKFSSHTFSLSEFIPNKK 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 T + D+ LS+L NPNP++P+Y+ + L+ YR+E H+R T+ L+P++F LI+I A Sbjct: 241 TPNIYPKDRPLSYLFNPNPSDPHYQRKPLQ-YRAELHRRFTECLYPIVFALIAIAIAGDA 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 RQ +I F +++ S ++W + K E NP YIP+LY+ IS + M+ K Sbjct: 300 HSYRQ-ARISATFSTITFSLLIYWLGYFFARKTENNPSYIPLLYVIPIGISLLTFFMLLK 358 Query: 357 KY 358 Y Sbjct: 359 DY 360 >gi|49475339|ref|YP_033380.1| hypothetical protein BH05450 [Bartonella henselae str. Houston-1] gi|49238145|emb|CAF27353.1| hypothetical protein BH05450 [Bartonella henselae str. Houston-1] Length = 396 Score = 319 bits (818), Expect = 4e-85, Method: Composition-based stats. Identities = 122/363 (33%), Positives = 207/363 (57%), Gaps = 6/363 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYIL+ I F + + I+W +QIL RIN +++S ++L +L+ S L+P+V Sbjct: 1 MRIIELYILKRILILFSAVMIAAIGISWTVQILARINFLTTSKQTLLTILQFSISLVPSV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V PF + T+ L++MN+++EL II +G + T+ +P+L +A + S F N Sbjct: 61 IFLVIPFALLIAITSTLSAMNQDSELAIISASGFPKSTVWRPILLIAFVASCASFFIANF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ R ++Q+ A L ++ E F +L ++LYI+I + NP+ TL +FI D RD Sbjct: 121 VIPQARLNMRQMLATTHYDLINLFISEGSFQKLANNLYIEIGQRNPDGTLAHLFIADQRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 + YYA S+ ++ ++LN+GE+ R + + +SI++F SYT N Sbjct: 181 PKIDLFYYATKASVVSNKNGHFLVLNNGEIERINHQNDSVSIVQFSSYTFSLGEFIPNDK 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 T L D+ LS+L NPNP + Y+ + L+ YR+EFH+RLT+WL+P++F LI++ AA Sbjct: 241 TPTLYPKDRPLSYLRNPNPKDLYYQRKPLQ-YRAEFHRRLTEWLYPIVFSLIALAAAGDT 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 RQ F +++ SF V+W + K + + Y+P+LY+ +S + M+ Sbjct: 300 RSYRQVGN-SANFSAIAFSFLVYWIGYFAAEKAKSDLAYVPLLYIIPIGVSILVFFMLLT 358 Query: 357 KYT 359 T Sbjct: 359 NRT 361 >gi|319405494|emb|CBI79113.1| conserved membrane hypothetical protein [Bartonella sp. AR 15-3] Length = 382 Score = 319 bits (817), Expect = 5e-85, Method: Composition-based stats. Identities = 133/362 (36%), Positives = 204/362 (56%), Gaps = 6/362 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYIL+ I F L + I+W +QIL RIN +++S ++ +L S LIP+V Sbjct: 1 MRILELYILKRIFILFSAVMLGAIGISWTVQILARINFLTTSGQTFLTILYFSSLLIPSV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +V PF + T +L++MN++TEL +I +G S+ + KP+L LAIL S F N Sbjct: 61 TSLVIPFALVIAITIILSTMNQDTELAVISASGISKNIVWKPILLLAILASFTSFSITNF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P R ++Q+ A A L ++ E F L +LYI+I + N N T+ +FI D RD Sbjct: 121 IAPHARLNMRQMLANAHSDLISLFIREGSFQELAKNLYIEIGERNANGTIGRLFIADQRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 Q YYA G+I +++ +ILNDGE+ R + ++SI+KF SYT N Sbjct: 181 HQLGLFYYAAKGAIVNNKKGNFLILNDGEIERIDYKNDNVSIIKFSSYTFSLSEFIPNKK 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 T + D+ LS+L NP+PN+P+Y+ + + YR+EFH+R T+ L+P++F LI+IV Sbjct: 241 TPNIYPKDRPLSYLSNPSPNDPHYQRKPFQ-YRAEFHRRFTECLYPIVFALIAIVIVGNA 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 RQ I F +++ S ++W + K E NP YIP+LY+ I S+ M+ Sbjct: 300 RSYRQ-AHIFETFSTITFSLLIYWLGYFFAQKAENNPSYIPLLYIIPIGICSLTFFMLIT 358 Query: 357 KY 358 + Sbjct: 359 DH 360 >gi|49474101|ref|YP_032143.1| hypothetical protein BQ04630 [Bartonella quintana str. Toulouse] gi|49239605|emb|CAF25962.1| hypothetical protein BQ04630 [Bartonella quintana str. Toulouse] Length = 396 Score = 318 bits (816), Expect = 8e-85, Method: Composition-based stats. Identities = 121/362 (33%), Positives = 208/362 (57%), Gaps = 6/362 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYIL+ I F + + I+W +QIL RIN +++S ++L +L+ S L+P+V Sbjct: 1 MRIIELYILKRILILFSAVMIAAISISWTVQILARINFLTTSRQTLLTVLQFSLSLVPSV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V PF + T+ L++MN+++EL II G + T+ KP+L LA++ S F+ N Sbjct: 61 IFLVIPFALVIAITSTLSAMNQDSELAIISAAGFPKSTVWKPILLLALIASCASFLIANF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ R ++Q+ A A L ++ E F +L ++LYI+I + NP+ TL +FI D RD Sbjct: 121 VAPQARFHMRQMLANAHSDLINLFINEGSFQKLANNLYIEIGERNPDGTLGRLFIADQRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 + YYA SI ++ ++LN+GE+ R + + +SI++F YT N Sbjct: 181 PKIDFFYYATKASIVSNKSGNFLVLNNGEIERINHQNDSVSIVQFSFYTFSLSEFIPNDK 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 T + D+ LS+LLNP+P +P Y+ L+ YR+EFH+RLT+WL+ ++F LI++ AA Sbjct: 241 TPTIYPKDRPLSYLLNPDPKDPYYQRRPLQ-YRAEFHRRLTEWLYSIVFSLIALAAARDA 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R+ + F +++ S V+W + K + + Y+P+LY+ +S + M+ Sbjct: 300 RSYRKTRNFA-NFSAIAFSLLVYWIGHFFAEKAKSDLAYVPLLYITPIGVSILVFFMLLT 358 Query: 357 KY 358 + Sbjct: 359 NH 360 >gi|319408320|emb|CBI81973.1| conserved membrane hypothetical protein [Bartonella schoenbuchensis R1] Length = 396 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 114/362 (31%), Positives = 206/362 (56%), Gaps = 6/362 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYIL+ + F + + I+ +Q+L RI+ +++S ++ +L S L+P V Sbjct: 1 MRIIELYILKRVFILFSAVMVAAIGISLTVQVLARIDFLTTSGQTFLTVLYFSSLLVPPV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ PF + T +L++MN+++EL II +G S+ T++KP+L LAI + F N Sbjct: 61 ISLIIPFALVIAITTILSTMNQDSELAIISASGFSKNTVLKPILLLAIFTACTSFSIANF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ R ++Q+ A L ++ E F L ++LYI+I + P+ T+ +FI D RD Sbjct: 121 VAPQARLNMRQMLANTHSDLINLFIREGSFQALTNNLYIEIGERYPDGTIGRLFIADQRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 ++ +YYA+ G+I ++ ++LNDGE+ R + + +SI+KF SYT N+ Sbjct: 181 SKIDLLYYAKKGAIVSNKNGNFLVLNDGEIERVNYQNDSVSIIKFNSYTFSLSEFIPNNG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + D+ LS+LL+P+P +P Y+ L+ Y++EFH+RLT+WL+P++F LI++ AA Sbjct: 241 VPTIYPKDRPLSYLLHPDPYDPYYQRNPLQ-YKAEFHRRLTEWLYPIVFALIAVAAAGDA 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 RQ I +++ S ++W + K + + Y+P+LY+ +S + M+ Sbjct: 300 RSHRQ-AHTSAIVFTITFSLLIYWIEYFFAEKTKNDLTYVPLLYITPIGVSVLIFFMLLT 358 Query: 357 KY 358 Sbjct: 359 NR 360 >gi|319407069|emb|CBI80706.1| putative permease, YjgP/YjgQ family [Bartonella sp. 1-1C] Length = 382 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 128/362 (35%), Positives = 203/362 (56%), Gaps = 6/362 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYIL+ I F L V I+W +QIL RIN ++++ ++ ++ S LIP+V Sbjct: 1 MRILELYILKRIFILFSAVLLGAVGISWTVQILARINFLTTNGQTFLTIVYFSSLLIPSV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ PF + T +L++MN+++EL +I +G S+ + KP+L LA+L S F N Sbjct: 61 TSLIIPFALVVAITTILSTMNQDSELAVISASGISKNIVWKPILLLAVLASFTSFSITNF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P R ++Q+ A + L ++ E F L +LYI+I + N N T+ +FI D RD Sbjct: 121 IAPHARLNMRQILASSHSDLISLFIREGSFQELTKNLYIEIGERNANGTIGRLFIADQRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 Q YYA G+I +++ +ILNDGE+ R + ++SI+KF S+T N Sbjct: 181 PQLGLFYYATKGAIVNNKKGKFLILNDGEIERIDYKNDNVSIIKFSSHTFSLSEFIPNKK 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 T + D+ LS+L NPNPN+ +Y+ + L+ YR+E H+R T+ L+P++F LI I A Sbjct: 241 TPNIYPKDRPLSYLFNPNPNDSHYQRKPLQ-YRAELHRRFTECLYPIVFALIVIAIAGDA 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 RQ +I F +++ S ++W + K E NP YIP+LY+ IS + M+ Sbjct: 300 HSYRQ-ARISATFSTITFSLLIYWLGYFFARKTENNPSYIPLLYIIPIGISLLIFFMLLT 358 Query: 357 KY 358 Y Sbjct: 359 DY 360 >gi|121602513|ref|YP_988823.1| YjgP/YjgQ permease [Bartonella bacilliformis KC583] gi|120614690|gb|ABM45291.1| putative permease, YjgP/YjgQ family [Bartonella bacilliformis KC583] Length = 396 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 126/364 (34%), Positives = 204/364 (56%), Gaps = 8/364 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYIL+ I F V I W +QIL RIN +++S ++ L S LIP+V Sbjct: 1 MRILELYILKRIFILFSAVITATVCIIWTVQILARINFLTTSGQTFLTALYFSSLLIPSV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V PF + L+ MN+++EL II +G + T+ KP+LFLAIL S F N Sbjct: 61 ISLVIPFALMIAIITTLSRMNQDSELTIISASGIPKTTIWKPILFLAILASCASFFITNF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ R ++++ A A L ++ E F +L ++LYI I + P+ T+ +FI D RD Sbjct: 121 VAPQARLHMREMLASAHSDLINLFIHEGSFQKLTNNLYIGIGERYPDGTIGRLFIADQRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 + +YYA G+I ++ ++LN+GE+ R + + +SI+KF SYT N Sbjct: 181 PKIDLLYYATKGAIVSNKSGNILVLNNGEIKRLNHQNDSVSIIKFSSYTFNLSEFIPNDR 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + D+ LS+L P+P++PNY+ + L+ Y++EFH+RLT+WL+P++F LI++ AA Sbjct: 241 IPTIYPKDRPLSYLYRPDPDDPNYQRQPLQ-YKAEFHRRLTEWLYPIVFALIAVAAAGDA 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL--LMI 354 RQ +I F ++ S ++ + + K E N YIP+LY+ S + L+I Sbjct: 300 RSYRQ-ARISTTFFAIIFSLLIYLVRYFFVEKTENNLAYIPLLYITPLGTSILIFFRLLI 358 Query: 355 KKKY 358 +K Sbjct: 359 NRKM 362 >gi|13476526|ref|NP_108096.1| hypothetical protein mll7866 [Mesorhizobium loti MAFF303099] gi|14027287|dbj|BAB54241.1| mll7866 [Mesorhizobium loti MAFF303099] Length = 400 Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats. Identities = 108/363 (29%), Positives = 210/363 (57%), Gaps = 7/363 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R FL + ++ + I W Q+L +I+LV+ S +S +++ ++P++ Sbjct: 1 MKVVERYIMRRAFVVFLAALVWTLAIVWTTQVLAKIDLVTDSGQSSLTFFEVAALILPSI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + L+ MN ++EL++++ G SR T+++P++ LA+ S+F F +N Sbjct: 61 IPIVVPFALVVAVAQTLSVMNSDSELVVVNAAGASRWTIVRPIMLLALAASVFSFAVDNG 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I+P R + L A+++ L ++E F +++D L+++I + P+N L GIF+ DSR+ Sbjct: 121 IDPYARQKNRALVAQSRADLLSLIIQEGTFRKIEDGLFLQIGERLPDNRLGGIFVADSRE 180 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 + +YYA++GS+ + +++NDG +HRK+ ++ D+S+++F SY + A +S Sbjct: 181 EGVNLVYYAKTGSVVERGGEKVLMMNDGVIHRKT-LTGDLSVIRFTSYAFDMSAFMAAAS 239 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L DQ +LLNPN N+ Y+ + + YR+E +R ++WL+ ++F LI++ A Sbjct: 240 EVTLLPKDQTTQYLLNPNVNDKLYQ-QAPQQYRAEIDQRFSEWLYSMVFALIALAVAGDA 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + +++P+ +++IS V W + K ++ P Y ++Y S++ + I Sbjct: 299 R-SHREARVNPLITAITISLFVRWLGFFAASKADEVPQYAYMVYGVPIVASAVAIWFIVS 357 Query: 357 KYT 359 T Sbjct: 358 NRT 360 >gi|319898731|ref|YP_004158824.1| permease, YjgP/YjgQ family [Bartonella clarridgeiae 73] gi|319402695|emb|CBI76241.1| putative permease, YjgP/YjgQ family [Bartonella clarridgeiae 73] Length = 385 Score = 315 bits (807), Expect = 7e-84, Method: Composition-based stats. Identities = 130/358 (36%), Positives = 203/358 (56%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYIL+ I F + + I+W +QIL RIN +++S ++ +L S LIP+V Sbjct: 1 MRILELYILKRIFLLFSAVMIGAIGISWTVQILARINFLTTSGQTFLTVLHFSSLLIPSV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +V PF + T +L++MN+++EL +I +G + + KP+L LAIL S+ F N Sbjct: 61 TSLVMPFGLVIAITIILSTMNQDSELAVISASGIPKNIIWKPILLLAILTSLTSFSITNF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P R ++Q+ A L ++ E F L +LYI+I + N N T+ +FI D RD Sbjct: 121 IAPNARLNMRQMLANTHSDLINLFIREGSFQELTKNLYIEIGETNTNGTIGRLFIADQRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 Q YYA+ G I +++ +ILNDGE+ R + ++SI+KF S+T N Sbjct: 181 RQFGLFYYAKKGIIVNNKKGNFLILNDGEIERIDYKNDNVSIIKFSSHTFSLSEFITNKR 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 T + D+ LS+L NP+PN+P+Y+ + L+ YR+EFH+RLT+ L+P++F LI++ A Sbjct: 241 TPNIYPKDRPLSYLSNPDPNDPHYQRKPLQ-YRAEFHRRLTECLYPIVFALIAVAIAGDA 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RQ I F +S S ++W + K E NP YIP+LY+ IS + M+ Sbjct: 300 RSYRQT-HISSTFSVISFSLLIYWLGYFFAKKTENNPVYIPLLYIIPIGISILTFFML 356 >gi|153009928|ref|YP_001371143.1| permease YjgP/YjgQ family protein [Ochrobactrum anthropi ATCC 49188] gi|151561816|gb|ABS15314.1| permease YjgP/YjgQ family protein [Ochrobactrum anthropi ATCC 49188] Length = 402 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 112/362 (30%), Positives = 204/362 (56%), Gaps = 6/362 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYILR + FL V I W +Q+LQRI+ +++S ++ +++ S LIP+ Sbjct: 1 MRLIELYILRRVAIMFLAVLGAAVGITWTVQVLQRIDFLTTSGQTFQTIIQFSSLLIPSA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T L++MN+++EL++I+ +G R +++P+L LA ++S+ F+ N Sbjct: 61 IPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAAVISVVSFLVANY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 ++P R ++ + A A L ++E F +L D+LYI++++ + ++ G+FI DSRD Sbjct: 121 VDPYARMNMRAMIANASADLMNVIVQEGNFRKLADNLYIQVAERRADGSIGGLFIADSRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTE--SANSS 236 IYYA G+I +++ +GEV R+ +SI+KF SY ++ Sbjct: 181 PSLDLIYYAADGAIASTPTGDMLLMQNGEVQRRDVSDGTVSIIKFNSYAFDLSQFASAGD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V+ A D+ LS+LLNP+PN+P + L Y++E H+RLTQWL+PV+F +I++ A Sbjct: 241 DFVIYAKDRPLSYLLNPDPNDPILQTRPL-RYKAELHRRLTQWLYPVVFAMIALAFAGDS 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + ++ F ++S + V+W + + +++ YI ++YL + + + Sbjct: 300 R-SHREARVSASFSAISTALLVYWAGYFASDRADKDAGYIVVMYLVPAAVILVTGFALAT 358 Query: 357 KY 358 Sbjct: 359 GR 360 >gi|260466946|ref|ZP_05813128.1| permease YjgP/YjgQ family protein [Mesorhizobium opportunistum WSM2075] gi|259029243|gb|EEW30537.1| permease YjgP/YjgQ family protein [Mesorhizobium opportunistum WSM2075] Length = 400 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 104/363 (28%), Positives = 209/363 (57%), Gaps = 7/363 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E YI+R F+ + ++ + I W Q+L +I+LV+ S +S +++ ++P++ Sbjct: 1 MTVVERYIMRRAFVVFMAALVWTLAIVWTTQVLAKIDLVTDSGQSALTFFEVASLILPSI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + L+ MN ++EL +++ +G SR T+++P++ LA+ S+F F +N Sbjct: 61 IPIVVPFALVVAVAQTLSVMNSDSELAVVNASGASRWTIVRPIMLLALAASVFSFAVDNG 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I+P R + L A+++ L ++E F +++D L+++I + P+N L GIF+ DSR+ Sbjct: 121 IDPYARQKNRALVAESRSDLLSLIIQEGTFRKIEDGLFLQIGERLPDNKLGGIFVADSRE 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 + +YYA++GSI + +++NDG +HRK+ ++ D+S+++F SY + + ++ Sbjct: 181 EGVNLVYYAKTGSIIERGGEKVLMMNDGVIHRKT-LTGDLSVIRFTSYAFDMSAFMSAAN 239 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L DQ +LLNP+ N+ NY+ + + YR+E +R ++W + ++F LI++ A Sbjct: 240 QVTLLPKDQTTQYLLNPSANDKNYQ-QNPQEYRAEIDQRFSEWTYSMVFALIALAVAGDA 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + +++P+ +++IS V W + K ++ P Y ++Y S++ + I Sbjct: 299 R-SHREARVNPLITAIAISLFVRWLGFFAASKADEIPQYGYMVYGVPIVASAVAIWFIVS 357 Query: 357 KYT 359 T Sbjct: 358 NRT 360 >gi|239831521|ref|ZP_04679850.1| permease YjgP/YjgQ family protein [Ochrobactrum intermedium LMG 3301] gi|239823788|gb|EEQ95356.1| permease YjgP/YjgQ family protein [Ochrobactrum intermedium LMG 3301] Length = 402 Score = 313 bits (802), Expect = 3e-83, Method: Composition-based stats. Identities = 112/362 (30%), Positives = 204/362 (56%), Gaps = 6/362 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYILR + FL V I W +Q+LQRI+ +++S ++ +++ S LIP+ Sbjct: 1 MRLIELYILRRVAIMFLAVLGAAVGITWTVQVLQRIDFLTTSGQTFQTIVQFSSLLIPSA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T L++MN+++EL++I+ +G R +++P+L LA ++S+ F+ N Sbjct: 61 IPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAAVISVVSFLVANY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 ++P R ++ + A A L ++E F +L D+LYI++++ + ++ G+FI DSRD Sbjct: 121 VDPYARMNMRAMIANASADLMNVIVQEGNFRKLADNLYIQVAERRADGSIGGLFIADSRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTE--SANSS 236 IYYA G+I +++ +GEV R+ +SI+KF SY ++ Sbjct: 181 PALDLIYYAADGAIASTPTGDMLLMQNGEVQRRDVSDGTVSIIKFNSYAFDLSQFASAGD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V+ A D+ LS+LLNP+PN+P + L Y++E H+RLTQWL+PV+F +I++ A Sbjct: 241 DFVIYAKDRPLSYLLNPDPNDPILQTRPL-RYKAELHRRLTQWLYPVVFAMIALAFAGDS 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + ++ F ++S + V+W + + +++ YI ++YL + + + Sbjct: 300 R-SHREARVSASFSAISTALLVYWAGYFASDRADKDAGYIVLMYLVPAAVILVTGFALAT 358 Query: 357 KY 358 Sbjct: 359 GR 360 >gi|254718823|ref|ZP_05180634.1| hypothetical protein Bru83_04675 [Brucella sp. 83/13] gi|265983808|ref|ZP_06096543.1| permease YjgP/YjgQ family protein [Brucella sp. 83/13] gi|306838745|ref|ZP_07471579.1| permease YjgP/YjgQ family protein [Brucella sp. NF 2653] gi|264662400|gb|EEZ32661.1| permease YjgP/YjgQ family protein [Brucella sp. 83/13] gi|306406147|gb|EFM62392.1| permease YjgP/YjgQ family protein [Brucella sp. NF 2653] Length = 402 Score = 313 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 112/358 (31%), Positives = 205/358 (57%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYILR + F V I W +Q+LQRIN +++S ++ +++ S LIP+ Sbjct: 1 MRLIELYILRRVAIMFFAVLGAAVGITWTVQVLQRINFLTTSGQTFQTIVQFSSLLIPSA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T L++MN+++EL++I+ +G R +++P+L LA +S+ F+ N Sbjct: 61 IPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAATVSVTSFLIANY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R ++ + A A L ++E F +L D+LYI++++ + ++ G+FI DSRD Sbjct: 121 VEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQVAERRADGSIGGLFIADSRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQT--ESANSS 236 IYYA G+I +++ +GEV R++ +SI+KF SY ++ Sbjct: 181 PTLDLIYYAADGAIASTPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAGD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V+ A D+ L++LLNP+PN+P + L TY++E H+R TQW++P+IF +I++ A Sbjct: 241 DFVIFAKDRPLTYLLNPDPNDPMLQTRPL-TYKAELHRRFTQWIYPLIFAMIALAIAGDS 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + ++ F ++S + V+W + + +++P YI ++YL + + ++ Sbjct: 300 R-SHREARVSASFSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFIL 356 >gi|23501574|ref|NP_697701.1| hypothetical protein BR0687 [Brucella suis 1330] gi|254701470|ref|ZP_05163298.1| hypothetical protein Bsuib55_11511 [Brucella suis bv. 5 str. 513] gi|254704017|ref|ZP_05165845.1| hypothetical protein Bsuib36_08829 [Brucella suis bv. 3 str. 686] gi|256060812|ref|ZP_05450972.1| hypothetical protein Bneo5_10667 [Brucella neotomae 5K33] gi|261324804|ref|ZP_05964001.1| permease YjgP/YjgQ family protein [Brucella neotomae 5K33] gi|261752013|ref|ZP_05995722.1| permease YjgP/YjgQ family protein [Brucella suis bv. 5 str. 513] gi|261754672|ref|ZP_05998381.1| permease YjgP/YjgQ family protein [Brucella suis bv. 3 str. 686] gi|306845288|ref|ZP_07477864.1| permease YjgP/YjgQ family protein [Brucella sp. BO1] gi|23347487|gb|AAN29616.1| membrane protein, putative [Brucella suis 1330] gi|261300784|gb|EEY04281.1| permease YjgP/YjgQ family protein [Brucella neotomae 5K33] gi|261741766|gb|EEY29692.1| permease YjgP/YjgQ family protein [Brucella suis bv. 5 str. 513] gi|261744425|gb|EEY32351.1| permease YjgP/YjgQ family protein [Brucella suis bv. 3 str. 686] gi|306274447|gb|EFM56254.1| permease YjgP/YjgQ family protein [Brucella sp. BO1] Length = 402 Score = 313 bits (801), Expect = 4e-83, Method: Composition-based stats. Identities = 112/358 (31%), Positives = 205/358 (57%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYILR + F V I W +Q+LQRIN +++S ++ +++ S LIP+ Sbjct: 1 MRLIELYILRRVAIMFFAVLGAAVGITWTVQVLQRINFLTTSGQTFQTIVQFSSLLIPSA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T L++MN+++EL++I+ +G R +++P+L LA +S+ F+ N Sbjct: 61 IPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAATVSVTSFLIANY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R ++ + A A L ++E F +L D+LYI++++ + ++ G+FI DSRD Sbjct: 121 VEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQVAERRADGSIGGLFIADSRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQT--ESANSS 236 IYYA G+I +++ +GEV R++ +SI+KF SY ++ Sbjct: 181 PTLDLIYYAADGAIASTPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAGD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V+ A D+ L++LLNP+PN+P + L TY++E H+R TQW++P+IF +I++ A Sbjct: 241 DFVIFAKDRPLTYLLNPDPNDPMLQTRPL-TYKAELHRRFTQWIYPLIFAMIALAIAGDS 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + ++ F ++S + V+W + + +++P YI ++YL + + ++ Sbjct: 300 R-SHREARVSASFSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFIL 356 >gi|256369122|ref|YP_003106630.1| permease YjgP/YjgQ family protein [Brucella microti CCM 4915] gi|255999282|gb|ACU47681.1| permease YjgP/YjgQ family protein [Brucella microti CCM 4915] Length = 402 Score = 311 bits (798), Expect = 9e-83, Method: Composition-based stats. Identities = 112/358 (31%), Positives = 205/358 (57%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYILR + F V I W +Q+LQRIN +++S ++ +++ S LIP+ Sbjct: 1 MRLIELYILRRVAIMFFAVLGAAVGITWTVQVLQRINFLTTSGQTFQTIVQFSSLLIPSA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T L++MN+++EL++I+ +G R +++P+L LA +S+ F+ N Sbjct: 61 IPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAATVSVTSFLIANY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R ++ + A A L ++E F +L D+LYI++++ + ++ G+FI DSRD Sbjct: 121 VEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQVAERRADGSIGGLFIADSRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQT--ESANSS 236 IYYA G+I +++ +GEV R++ +SI+KF SY ++ Sbjct: 181 PTLDLIYYAADGAIASTPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAGD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V+ A D+ L++LLNP+PN+P + L TY++E H+R TQW++P+IF +I++ A Sbjct: 241 DFVIFAKDRPLTYLLNPDPNDPMLQTRPL-TYKAELHRRFTQWIYPLIFTMIALAIAGDS 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + ++ F ++S + V+W + + +++P YI ++YL + + ++ Sbjct: 300 R-SHREARVSASFSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFIL 356 >gi|163842957|ref|YP_001627361.1| permease YjgP/YjgQ family protein [Brucella suis ATCC 23445] gi|163673680|gb|ABY37791.1| permease YjgP/YjgQ family protein [Brucella suis ATCC 23445] Length = 402 Score = 311 bits (797), Expect = 1e-82, Method: Composition-based stats. Identities = 111/358 (31%), Positives = 205/358 (57%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYILR + F V I W +++LQRIN +++S ++ +++ S LIP+ Sbjct: 1 MRLIELYILRRVAIMFFAVLGAAVGITWTVRVLQRINFLTTSGQTFQTIVQFSSLLIPSA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T L++MN+++EL++I+ +G R +++P+L LA +S+ F+ N Sbjct: 61 IPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAATVSVTSFLIANY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R ++ + A A L ++E F +L D+LYI++++ + ++ G+FI DSRD Sbjct: 121 VEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQVAERRADGSIGGLFIADSRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQT--ESANSS 236 IYYA G+I +++ +GEV R++ +SI+KF SY ++ Sbjct: 181 PTLDLIYYAADGAIASTPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAGD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V+ A D+ L++LLNP+PN+P + L TY++E H+R TQW++P+IF +I++ A Sbjct: 241 DFVIFAKDRPLTYLLNPDPNDPMLQTRPL-TYKAELHRRFTQWIYPLIFAMIALAIAGDS 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + ++ F ++S + V+W + + +++P YI ++YL + + ++ Sbjct: 300 R-SHREARVSASFSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFIL 356 >gi|161618656|ref|YP_001592543.1| permease YjgP/YjgQ family protein [Brucella canis ATCC 23365] gi|260566734|ref|ZP_05837204.1| permease YjgP/YjgQ family protein [Brucella suis bv. 4 str. 40] gi|161335467|gb|ABX61772.1| permease YjgP/YjgQ family protein [Brucella canis ATCC 23365] gi|260156252|gb|EEW91332.1| permease YjgP/YjgQ family protein [Brucella suis bv. 4 str. 40] Length = 402 Score = 311 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 112/358 (31%), Positives = 205/358 (57%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYILR + F V I W +Q+LQRIN +++S ++ +++ S LIP+ Sbjct: 1 MRLIELYILRRVAIMFFAVLGAAVGITWTVQVLQRINFLTTSGQTFQTIVQFSSLLIPSA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T L++MN+++EL++I+ +G R +++P+L LA +S+ F+ N Sbjct: 61 IPLVMPFVLIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAATVSVTSFLIANY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R ++ + A A L ++E F +L D+LYI++++ + ++ G+FI DSRD Sbjct: 121 VEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQVAERRADGSIGGLFIADSRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQT--ESANSS 236 IYYA G+I +++ +GEV R++ +SI+KF SY ++ Sbjct: 181 PTLDLIYYAADGAIASTPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAGD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V+ A D+ L++LLNP+PN+P + L TY++E H+R TQW++P+IF +I++ A Sbjct: 241 DFVIFAKDRPLTYLLNPDPNDPMLQTRPL-TYKAELHRRFTQWIYPLIFAMIALAIAGDS 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + ++ F ++S + V+W + + +++P YI ++YL + + ++ Sbjct: 300 R-SHREARVSASFSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFIL 356 >gi|148559016|ref|YP_001258669.1| hypothetical protein BOV_0679 [Brucella ovis ATCC 25840] gi|254707609|ref|ZP_05169437.1| hypothetical protein BpinM_11726 [Brucella pinnipedialis M163/99/10] gi|254709808|ref|ZP_05171619.1| hypothetical protein BpinB_05961 [Brucella pinnipedialis B2/94] gi|256031299|ref|ZP_05444913.1| hypothetical protein BpinM2_11718 [Brucella pinnipedialis M292/94/1] gi|256159413|ref|ZP_05457191.1| hypothetical protein BcetM4_10693 [Brucella ceti M490/95/1] gi|256254707|ref|ZP_05460243.1| hypothetical protein BcetB_10510 [Brucella ceti B1/94] gi|261221887|ref|ZP_05936168.1| permease YjgP/YjgQ family protein [Brucella ceti B1/94] gi|261315099|ref|ZP_05954296.1| permease YjgP/YjgQ family protein [Brucella pinnipedialis M163/99/10] gi|261317346|ref|ZP_05956543.1| permease YjgP/YjgQ family protein [Brucella pinnipedialis B2/94] gi|265988384|ref|ZP_06100941.1| permease YjgP/YjgQ family protein [Brucella pinnipedialis M292/94/1] gi|265997850|ref|ZP_06110407.1| permease YjgP/YjgQ family protein [Brucella ceti M490/95/1] gi|148370273|gb|ABQ60252.1| putative membrane protein [Brucella ovis ATCC 25840] gi|260920471|gb|EEX87124.1| permease YjgP/YjgQ family protein [Brucella ceti B1/94] gi|261296569|gb|EEY00066.1| permease YjgP/YjgQ family protein [Brucella pinnipedialis B2/94] gi|261304125|gb|EEY07622.1| permease YjgP/YjgQ family protein [Brucella pinnipedialis M163/99/10] gi|262552318|gb|EEZ08308.1| permease YjgP/YjgQ family protein [Brucella ceti M490/95/1] gi|264660581|gb|EEZ30842.1| permease YjgP/YjgQ family protein [Brucella pinnipedialis M292/94/1] Length = 402 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 111/358 (31%), Positives = 204/358 (56%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYILR + F V I W +Q+LQRIN +++S ++ +++ S LIP+ Sbjct: 1 MRLIELYILRRVAIMFFAVLGAAVGITWTVQVLQRINFLTTSGQTFQTIVQFSSLLIPSA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T L++MN+++EL++I+ +G R +++P+L LA +S+ F+ N Sbjct: 61 IPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAATVSVTSFLIANY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R ++ + A A L ++E F +L D+LYI++++ + ++ G+FI DSRD Sbjct: 121 VEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQVAERRADGSIGGLFIADSRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQT--ESANSS 236 IYYA G+I +++ +GEV R++ +SI+KF SY ++ Sbjct: 181 PTLDLIYYAADGAIASTPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAGD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V+ A D+ L++LLNP+ N+P + L TY++E H+R TQW++P+IF +I++ A Sbjct: 241 DFVIFAKDRPLTYLLNPDSNDPMLQTRPL-TYKAELHRRFTQWIYPLIFAMIALAIAGDS 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + ++ F ++S + V+W + + +++P YI ++YL + + ++ Sbjct: 300 R-SHREARVSASFSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFIL 356 >gi|225627184|ref|ZP_03785222.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] gi|260168438|ref|ZP_05755249.1| hypothetical protein BruF5_08728 [Brucella sp. F5/99] gi|261757900|ref|ZP_06001609.1| permease YjgP/YjgQ family protein [Brucella sp. F5/99] gi|225618019|gb|EEH15063.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] gi|261737884|gb|EEY25880.1| permease YjgP/YjgQ family protein [Brucella sp. F5/99] Length = 402 Score = 309 bits (793), Expect = 4e-82, Method: Composition-based stats. Identities = 111/358 (31%), Positives = 204/358 (56%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYILR + F V I W +Q+LQRIN +++S ++ +++ S LIP+ Sbjct: 1 MRLIELYILRRVAIMFFAVLGAAVGITWTVQVLQRINFLTTSGQTFQTIVQFSSLLIPSA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T L++MN+++EL++I+ +G R +++P+L LA +S+ F+ N Sbjct: 61 IPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAATVSVTSFLIANY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R ++ + A A L ++E F +L D+LYI++++ + ++ G+FI DSRD Sbjct: 121 VEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQVAERRADGSIGGLFIADSRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQT--ESANSS 236 IYYA G+I +++ +GEV R++ +SI+KF SY ++ Sbjct: 181 PTLDLIYYAADGAIASTPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAGD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V+ A D+ L++LLNP+ N+P + L TY++E H+R TQW++P+IF +I++ A Sbjct: 241 DFVIFAKDRPLTYLLNPDSNDPMLQTRPL-TYKAELHRRFTQWIYPLIFAMIALAIAGDF 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + ++ F ++S + V+W + + +++P YI ++YL + + ++ Sbjct: 300 R-SHREARVSASFSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFIL 356 >gi|62289649|ref|YP_221442.1| hypothetical protein BruAb1_0706 [Brucella abortus bv. 1 str. 9-941] gi|82699577|ref|YP_414151.1| YjgP/YjgQ permease [Brucella melitensis biovar Abortus 2308] gi|189023899|ref|YP_001934667.1| permease [Brucella abortus S19] gi|237815139|ref|ZP_04594137.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] gi|254688959|ref|ZP_05152213.1| Predicted permease YjgP/YjgQ family protein [Brucella abortus bv. 6 str. 870] gi|254697093|ref|ZP_05158921.1| Predicted permease YjgP/YjgQ family protein [Brucella abortus bv. 2 str. 86/8/59] gi|254729989|ref|ZP_05188567.1| Predicted permease YjgP/YjgQ family protein [Brucella abortus bv. 4 str. 292] gi|256257207|ref|ZP_05462743.1| Predicted permease YjgP/YjgQ family protein [Brucella abortus bv. 9 str. C68] gi|260545599|ref|ZP_05821340.1| permease YjgP/YjgQ family protein [Brucella abortus NCTC 8038] gi|260754448|ref|ZP_05866796.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 6 str. 870] gi|260757667|ref|ZP_05870015.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 4 str. 292] gi|260761494|ref|ZP_05873837.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 2 str. 86/8/59] gi|260883477|ref|ZP_05895091.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 9 str. C68] gi|297248057|ref|ZP_06931775.1| YjgP/YjgQ family permease [Brucella abortus bv. 5 str. B3196] gi|62195781|gb|AAX74081.1| hypothetical membrane protein [Brucella abortus bv. 1 str. 9-941] gi|82615678|emb|CAJ10665.1| Predicted permease YjgP/YjgQ family [Brucella melitensis biovar Abortus 2308] gi|189019471|gb|ACD72193.1| Predicted permease YjgP/YjgQ family [Brucella abortus S19] gi|237789976|gb|EEP64186.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] gi|260097006|gb|EEW80881.1| permease YjgP/YjgQ family protein [Brucella abortus NCTC 8038] gi|260667985|gb|EEX54925.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 4 str. 292] gi|260671926|gb|EEX58747.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 2 str. 86/8/59] gi|260674556|gb|EEX61377.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 6 str. 870] gi|260873005|gb|EEX80074.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 9 str. C68] gi|297175226|gb|EFH34573.1| YjgP/YjgQ family permease [Brucella abortus bv. 5 str. B3196] Length = 402 Score = 309 bits (791), Expect = 5e-82, Method: Composition-based stats. Identities = 111/358 (31%), Positives = 204/358 (56%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYILR + F V I W +Q+LQRIN +++S ++ +++ S LIP+ Sbjct: 1 MRLIELYILRRVAIMFFAVLGAAVGITWAVQVLQRINFLTTSGQTFQTIVQFSSLLIPSA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T L++MN+++EL++I+ +G R +++P+L LA +S+ F+ N Sbjct: 61 IPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAATVSVTSFLIANY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R ++ + A A L ++E F +L D+LYI++++ + ++ G+FI DSRD Sbjct: 121 VEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQVAERRADGSIGGLFIADSRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQT--ESANSS 236 IYYA G+I +++ +GEV R++ +SI+KF SY ++ Sbjct: 181 PTLDLIYYAADGAIASTPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAGD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V+ A D+ L++LLNP+ N+P + L TY++E H+R TQW++P+IF +I++ A Sbjct: 241 DFVIFAKDRPLTYLLNPDSNDPMLQTRPL-TYKAELHRRFTQWIYPLIFAMIALAIAGDS 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + ++ F ++S + V+W + + +++P YI ++YL + + ++ Sbjct: 300 R-SHREARVSASFSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFIL 356 >gi|254713812|ref|ZP_05175623.1| hypothetical protein BcetM6_10745 [Brucella ceti M644/93/1] gi|254717130|ref|ZP_05178941.1| hypothetical protein BcetM_12054 [Brucella ceti M13/05/1] gi|261218945|ref|ZP_05933226.1| permease YjgP/YjgQ family protein [Brucella ceti M13/05/1] gi|261321556|ref|ZP_05960753.1| permease YjgP/YjgQ family protein [Brucella ceti M644/93/1] gi|260924034|gb|EEX90602.1| permease YjgP/YjgQ family protein [Brucella ceti M13/05/1] gi|261294246|gb|EEX97742.1| permease YjgP/YjgQ family protein [Brucella ceti M644/93/1] Length = 402 Score = 308 bits (790), Expect = 6e-82, Method: Composition-based stats. Identities = 111/358 (31%), Positives = 203/358 (56%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYILR + F V I W +Q+LQRIN +++S ++ +++ S LIP+ Sbjct: 1 MRLIELYILRRVAIMFFAVLGAAVGITWTVQVLQRINFLTTSGQTFQTIVQFSSLLIPSA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T L++MN+++EL++I+ +G R ++P+L LA +S+ F+ N Sbjct: 61 IPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAAMRPILILAATVSVTSFLIANY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R ++ + A A L ++E F +L D+LYI++++ + ++ G+FI DSRD Sbjct: 121 VEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQVAERRADGSIGGLFIADSRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQT--ESANSS 236 IYYA G+I +++ +GEV R++ +SI+KF SY ++ Sbjct: 181 PTLDLIYYAADGAIASTPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAGD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V+ A D+ L++LLNP+ N+P + L TY++E H+R TQW++P+IF +I++ A Sbjct: 241 DFVIFAKDRPLTYLLNPDSNDPMLQTRPL-TYKAELHRRFTQWIYPLIFAMIALAIAGDS 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + ++ F ++S + V+W + + +++P YI ++YL + + ++ Sbjct: 300 R-SHREARVSASFSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFIL 356 >gi|294852049|ref|ZP_06792722.1| hypothetical protein BAZG_00965 [Brucella sp. NVSL 07-0026] gi|294820638|gb|EFG37637.1| hypothetical protein BAZG_00965 [Brucella sp. NVSL 07-0026] Length = 402 Score = 308 bits (790), Expect = 7e-82, Method: Composition-based stats. Identities = 111/358 (31%), Positives = 204/358 (56%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYILR + F V I W +Q+LQRIN +++S ++ +++ S LIP+ Sbjct: 1 MRLIELYILRRVAIMFFAVLGAAVGITWTVQVLQRINFLTTSGQTFQTIVQFSSLLIPSA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T L++MN+++EL++I+ +G R +++P+L LA +S+ F+ N Sbjct: 61 IPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAATVSVTSFLIANY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R ++ + A A L ++E F +L D+LYI++++ + ++ G+FI DSRD Sbjct: 121 VEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQVAERRADGSIGGLFIADSRD 180 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT--ESANSS 236 IYYA G+I +++ +GEV R++ +SI+KF SY ++ Sbjct: 181 PTLDLIYYAADGAIASMPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAGD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V+ A D+ L++LLNP+ N+P + L TY++E H+R TQW++P+IF +I++ A Sbjct: 241 DFVIFAKDRPLTYLLNPDSNDPMLQTRPL-TYKAELHRRFTQWIYPLIFAMIALAIAGDS 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + ++ F ++S + V+W + + +++P YI ++YL + + ++ Sbjct: 300 R-SHREARVSASFSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFIL 356 >gi|17987545|ref|NP_540179.1| hypothetical protein BMEI1262 [Brucella melitensis bv. 1 str. 16M] gi|225852207|ref|YP_002732440.1| permease YjgP/YjgQ family protein [Brucella melitensis ATCC 23457] gi|256044380|ref|ZP_05447284.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 1 str. Rev.1] gi|256113223|ref|ZP_05454091.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 3 str. Ether] gi|256264285|ref|ZP_05466817.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 2 str. 63/9] gi|260563732|ref|ZP_05834218.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 1 str. 16M] gi|265990798|ref|ZP_06103355.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 1 str. Rev.1] gi|265994634|ref|ZP_06107191.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 3 str. Ether] gi|17983248|gb|AAL52443.1| hypothetical membrane spanning protein [Brucella melitensis bv. 1 str. 16M] gi|225640572|gb|ACO00486.1| permease YjgP/YjgQ family protein [Brucella melitensis ATCC 23457] gi|260153748|gb|EEW88840.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 1 str. 16M] gi|262765747|gb|EEZ11536.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 3 str. Ether] gi|263001582|gb|EEZ14157.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 1 str. Rev.1] gi|263094545|gb|EEZ18354.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 2 str. 63/9] Length = 402 Score = 308 bits (789), Expect = 1e-81, Method: Composition-based stats. Identities = 111/358 (31%), Positives = 203/358 (56%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYILR + F V I W +Q+LQRIN +++S ++ +++ S LIP+ Sbjct: 1 MRLIELYILRRVAIMFFAVLGAAVGITWTVQVLQRINFLTTSGQTFQTIVQFSSLLIPSA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T L++MN+++EL++I+ +G R +++P+L LA +S+ F+ N Sbjct: 61 IPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAATVSVTSFLIANY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R ++ + A A L ++E F +L D+LYI+I++ + ++ G+FI DS D Sbjct: 121 VEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQIAERRADGSIGGLFIADSCD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQT--ESANSS 236 IYYA G+I +++ +GEV R++ +SI+KF SY ++ Sbjct: 181 PTLDLIYYAADGAIASTPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAGD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V+ A D+ L++LLNP+ N+P + L TY++E H+R TQW++P+IF +I++ A Sbjct: 241 DFVIFAKDRPLTYLLNPDSNDPMLQTRPL-TYKAELHRRFTQWIYPLIFAMIALAIAGDS 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + ++ F ++S + V+W + + +++P YI ++YL + + ++ Sbjct: 300 R-SHREARVSASFSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFIL 356 >gi|254693441|ref|ZP_05155269.1| Predicted permease YjgP/YjgQ family protein [Brucella abortus bv. 3 str. Tulya] gi|261213694|ref|ZP_05927975.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 3 str. Tulya] gi|260915301|gb|EEX82162.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 3 str. Tulya] Length = 402 Score = 308 bits (789), Expect = 1e-81, Method: Composition-based stats. Identities = 111/358 (31%), Positives = 204/358 (56%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYILR + F V I W +Q+LQRIN +++S ++ +++ S LIP+ Sbjct: 1 MRLIELYILRRVAFMFFAVLGAAVGITWAVQVLQRINFLTTSGQTFQTIVQFSSLLIPSA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T L++MN+++EL++I+ +G R +++P+L LA +S+ F+ N Sbjct: 61 IPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAATVSVTSFLIANY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R ++ + A A L ++E F +L D+LYI++++ + ++ G+FI DSRD Sbjct: 121 VEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQVAERRADGSIGGLFIADSRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQT--ESANSS 236 IYYA G+I +++ +GEV R++ +SI+KF SY ++ Sbjct: 181 PTLDLIYYAADGAIASTPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAGD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V+ A D+ L++LLNP+ N+P + L TY++E H+R TQW++P+IF +I++ A Sbjct: 241 DFVIFAKDRPLTYLLNPDSNDPMLQTRPL-TYKAELHRRFTQWIYPLIFAMIALAIAGDS 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + ++ F ++S + V+W + + +++P YI ++YL + + ++ Sbjct: 300 R-SHREARVSASFSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFIL 356 >gi|319784423|ref|YP_004143899.1| permease YjgP/YjgQ family protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170311|gb|ADV13849.1| permease YjgP/YjgQ family protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 400 Score = 305 bits (782), Expect = 6e-81, Method: Composition-based stats. Identities = 106/363 (29%), Positives = 206/363 (56%), Gaps = 7/363 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R F+ + ++ + I W Q+L +I+LV+ S +S +++ ++P++ Sbjct: 1 MKVVERYIMRRAFVVFMAALVWTLAIVWTTQVLAKIDLVTDSGQSALTFFEVAALILPSI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + L+ MN ++EL +++ G SR T+++P++ LA+ ++F F +N Sbjct: 61 IPIVVPFALVVAVAQTLSVMNSDSELAVVNAAGASRWTIVRPIMLLALAAAVFSFAVDNG 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I+P R + L A ++ L ++E F ++DD L++++ + PNN L GIF+ DSR+ Sbjct: 121 IDPYARQKNRALVASSRADLLSLIIQEGTFRKIDDGLFLQVGERLPNNRLGGIFVADSRE 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ--TESANSS 236 + +YYA++GSI + +++NDG +HRK+ ++ D+S+++F SY A +S Sbjct: 181 EGVNLVYYAKTGSIIERGGEKVLMMNDGVIHRKT-LTGDLSVIRFTSYAFDMSAFMAAAS 239 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L DQ +LLNP+ N+ Y+ + YR+E ++R ++W + ++F LI++ A Sbjct: 240 AVTLLPKDQTTQYLLNPSANDKYYQ-QSPYEYRAEVNQRFSEWTYSMVFALIALAVAGDA 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + +++P+ +++IS V W + K ++ P Y ++Y S++ + I Sbjct: 299 R-SHREARVNPLITAITISLFVRWLGFFAASKADEIPQYAYMVYGVPIVASAVAIWFIVS 357 Query: 357 KYT 359 T Sbjct: 358 NRT 360 >gi|15888448|ref|NP_354129.1| hypothetical protein Atu1108 [Agrobacterium tumefaciens str. C58] gi|15156140|gb|AAK86914.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58] Length = 389 Score = 305 bits (781), Expect = 7e-81, Method: Composition-based stats. Identities = 131/362 (36%), Positives = 209/362 (57%), Gaps = 9/362 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YILR + FL++ L ++ I W IQ+LQRINLV+ + +S+ + ++ ++PT+ Sbjct: 1 MKLLENYILRRTTQMFLVALLPVLAIIWTIQVLQRINLVTDTGQSMGSFMALATMILPTL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T + T+MN ++EL IID G R + +PVL LA +LS+F F N Sbjct: 61 IPVVLPFALVIGITQIFTTMNNDSELAIIDAAGAPRSVMYRPVLILAAVLSLFSFTITNF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 IEP R++ +Q+ A A L S +EE F + D LY++I++ L+G+F+ D RD Sbjct: 121 IEPPARNSARQMVAAAYADLLSSVIEEKTFRTIQDGLYVQIAQR-QGRILKGLFVADRRD 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES---ANSST 237 IYYA+ G ID ++ + DGEV +K+P +SI+KF SY + S Sbjct: 180 PNFDLIYYAKEGMIDESGTSLTMRDGEVQQKTPD-GKVSIVKFLSYAFDLSTMSEKQDSE 238 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 L D +L FLL+P+ NN +Y+ ET+RSE HKRL+ W+F F LIS+ A Sbjct: 239 PSLSPGDASLGFLLSPDENNASYK-RSPETFRSELHKRLSDWMFAFSFALISLAIAADSR 297 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--FCISSIFLLMIK 355 + ++HP+ +L +F + W Y+ ++++Q+ +IP++Y ++ F+LM Sbjct: 298 -SHREARLHPMVAALVTAFMLRWLGFYVTNQVKQSAAFIPLVYAVPGLSGAAAAFVLMTG 356 Query: 356 KK 357 +K Sbjct: 357 RK 358 >gi|27379218|ref|NP_770747.1| permease [Bradyrhizobium japonicum USDA 110] gi|27352369|dbj|BAC49372.1| bll4107 [Bradyrhizobium japonicum USDA 110] Length = 389 Score = 303 bits (777), Expect = 3e-80, Method: Composition-based stats. Identities = 75/358 (20%), Positives = 158/358 (44%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M S + YI R SF + + + + W+ Q L+ I+L++S +++ L I+ ++P + Sbjct: 1 MGSIDRYIFRTTLASFALVLVSLTGVIWITQALRGIDLMTSQGQTILTFLGITSLVVPAL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +++P + ++ L + ++E+++++ G S L P + ++++ + Sbjct: 61 VLIISPIALMIAISHTLNKLATDSEIIVMNAAGFSPFRLFYPFFYATCVVALLVAFIAAY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P IKQ A+ + + L+ F +LD +L I+I + P L GIFI D RD Sbjct: 121 LAPDGMRRIKQWDAEITADVLTNILQPGRFAQLDKNLTIRIRERLPGGILAGIFIDDRRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTE--SANSS 236 A+ G + + ++L G + R +D +++ F Y S Sbjct: 181 PNERVSIVAEHGEVMKNDTGSFLVLETGNLQRFEVGKRDPALVAFGRYGFDMSKFSGQGR 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L ++ L L +P+ ++P Y+ ++ +RS H L ++P F +++ Sbjct: 241 DVTLGIRERYLWELFSPSEDDPVYK-QIPGQFRSALHDSLLAPIYPFAFAVLTFAFLGAP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RQ + I S+ FG+ ++P + + Y + + + MI Sbjct: 300 RTTRQSRNFS-IGSSIVAVFGLRMAGFACSVMAVKSPAAVLVQYAMVLGAIGVGMWMI 356 >gi|85716329|ref|ZP_01047302.1| permease YjgP/YjgQ [Nitrobacter sp. Nb-311A] gi|85696845|gb|EAQ34730.1| permease YjgP/YjgQ [Nitrobacter sp. Nb-311A] Length = 390 Score = 302 bits (774), Expect = 5e-80, Method: Composition-based stats. Identities = 77/361 (21%), Positives = 168/361 (46%), Gaps = 6/361 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M S + YI R SF++ + + + W+ Q L+ I+L++S +++ L I+ IP + Sbjct: 1 MGSIDRYIFRTTLASFVVVLVSLTGVIWITQALRGIDLMTSQGQTILTFLGITSLAIPVL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +++P + ++ L + ++E+++++ G S L +P ++ +++++ + Sbjct: 61 VLIISPIALMIAISHTLHKLATDSEIIVMNAAGLSPFRLFRPFIYATVIVALLVAFIAAY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +K+ A+ + + L+ F +LD +L I+I + P L GIFI D R+ Sbjct: 121 LAPDGMRRLKRWDAEITADVLANVLQPGRFAQLDPNLTIRIRERQPGGQLAGIFIDDRRN 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTE--SANSS 236 + A G++ + + ++L DG + R ++ +++ F Y S Sbjct: 181 SDERLSIIADHGTVMKNDKGSFLVLEDGHLERFETGKREPAMVAFDRYAFDMSKFSNRGH 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 +V ++ L L+ P+ N+P + +L +R+E H R T ++P +F ++ Sbjct: 241 DVVYGIRERYLWELIVPDQNDPVVQ-QLQGQFRAELHDRFTAPIYPFVFAALTFAFLGTP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 RQ + + +++ FG+ + ++P + YL LF I L +I Sbjct: 300 RTTRQSRNFS-MGAAIAAVFGLRMAGFALSVMTVKSPLAALLQYLLLFGAIGISLRVIVA 358 Query: 357 K 357 Sbjct: 359 G 359 >gi|148255228|ref|YP_001239813.1| putative permease [Bradyrhizobium sp. BTAi1] gi|146407401|gb|ABQ35907.1| putative permease [Bradyrhizobium sp. BTAi1] Length = 389 Score = 302 bits (773), Expect = 7e-80, Method: Composition-based stats. Identities = 82/358 (22%), Positives = 164/358 (45%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M S + YI R SF + + + + W+ Q L+ I+L++S +++ L I+G +IP++ Sbjct: 1 MGSIDRYIFRTTLASFAVVLVSLTGVIWITQALRGIDLMTSQGQTILTFLGITGLVIPSL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + ++ L + ++E+++++ G S I L P + +++I + Sbjct: 61 LGVIAPIALMIAVSHTLNKLATDSEIIVMNAAGMSPIRLFVPFAYATCVVAILVTFIAAF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P IKQ A+ + + L+ F +LD +L I+I + P LQGI I D RD Sbjct: 121 FAPDGLRRIKQWDAEITADVLANILQPGRFAQLDQNLTIRIRERQPGGELQGILIDDRRD 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE--SANSS 236 + A+ G++ + D ++L DG + R ++ +++ F Y S Sbjct: 181 PKERITIIAEKGTVVKNPDGSFLVLEDGNLERFEVGKREPAMVAFARYAFDMSKFSNQGR 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L ++ L L+ P ++P Y+ ++ +R E H R ++P F ++ Sbjct: 241 DVTLGIRERYLWELMAPAEDDPIYK-QIPGQFRQELHDRFLAPIYPFAFAALTFAFLGAP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RQ + L++ GF+ + + + P + YL LF + + + +I Sbjct: 300 RTTRQSRNFSFGSAILAVFGVRMAGFACSVMTV-KTPVAALVQYLMLFGVLGLSIWII 356 >gi|325292487|ref|YP_004278351.1| permease protein [Agrobacterium sp. H13-3] gi|325060340|gb|ADY64031.1| putative permease protein [Agrobacterium sp. H13-3] Length = 389 Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 131/368 (35%), Positives = 211/368 (57%), Gaps = 11/368 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YILR + FL++ L ++ I W IQ+LQRINLV+ + +S+ + ++ ++PT+ Sbjct: 1 MKLLENYILRRTTQMFLVALLPVLAIIWTIQVLQRINLVTDTGQSMGSFMALATMILPTL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T T+MN ++EL IID G+SR + +PV+ LA +LS F N Sbjct: 61 IPVVLPFALVIGITQTFTAMNNDSELAIIDAAGSSRSVMFRPVIILAAVLSALSFTITNF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 IEP R++ +Q+ A A L S +EE F + D LY++I++ L+G+F+ D RD Sbjct: 121 IEPPARNSARQMVAAAYADLLSSVIEEKTFRAVQDGLYVQIAQR-QGRILKGLFVADRRD 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT---ESANSST 237 IYYA+ G ID ++ + DGEV +K+P +SI+KF SY +S Sbjct: 180 PNFDLIYYAKEGMIDESGTSLTMRDGEVQQKTPD-GKVSIVKFLSYAFDLSTMSEKQTSE 238 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 L D +L FLL+P+ NN +Y+ E++RSE HKRL+ W+F F LIS+V A Sbjct: 239 PSLSPGDASLGFLLSPDENNASYK-RSPESFRSELHKRLSDWMFAFAFALISLVIAADAR 297 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--FCISSIFLLM-- 353 + ++HP+ +L +F + W Y+ ++++Q+ +IP++Y ++ F+L+ Sbjct: 298 -SHREARMHPMVAALVTAFMLRWLGFYVTNQVKQSAAFIPLVYAVPGLSGAAAAFILITG 356 Query: 354 IKKKYTKI 361 K + KI Sbjct: 357 RKPRMPKI 364 >gi|220925665|ref|YP_002500967.1| permease YjgP/YjgQ family protein [Methylobacterium nodulans ORS 2060] gi|219950272|gb|ACL60664.1| permease YjgP/YjgQ family protein [Methylobacterium nodulans ORS 2060] Length = 388 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 88/307 (28%), Positives = 154/307 (50%), Gaps = 5/307 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI R +FL + + WV Q L+ ++L+++ ++L I I+G IP + Sbjct: 1 MKQIERYIFRIALSAFLACLAGLTGVIWVTQALRELDLITAKGQTLLIFFLITGLSIPAL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L +V P M + L +N ++EL+++ G S L++P L LA+++ + + Sbjct: 61 LTIVAPVALFMAVLHALNRLNGDSELIVMSAAGMSPRHLMRPFLTLALIVGLAVAFLTIQ 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P ++ L + + + ++E F LD + + P TL GIF+ D R+ Sbjct: 121 VLPSSFQELRDLLTRVRGDFIANVVQEGQFTSLDSGITFHFRERGPGGTLLGIFMQDRRE 180 Query: 181 TQTHKIYYAQSG-SIDLDRQA-IILNDGEVHRKSPISKDISIMKFKSYTLQT--ESANSS 236 +Y A+ G ++DLD Q ++L G +HR+ P S+D SI+ F Y + + + Sbjct: 181 AGRSVVYLAERGQAVDLDGQTYLVLEKGSIHRQQPNSRDASIITFARYAVDLAAFTPPDT 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V K +++ + LL P+PN Y+ + +R+E H RLT WL+P+ LI+ A Sbjct: 241 DTVYKPRERSTAQLLFPDPNEHYYKL-VKGRFRAELHDRLTAWLYPLAMALIAFAALGDP 299 Query: 297 ALVRQRK 303 RQ + Sbjct: 300 RTTRQGR 306 >gi|218672884|ref|ZP_03522553.1| putative permease protein [Rhizobium etli GR56] Length = 380 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 117/323 (36%), Positives = 198/323 (61%), Gaps = 5/323 (1%) Query: 15 SFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETT 74 FL++ L ++ I W Q+LQRINLV+ S +S+ K++ ++P+++P+V PF + T Sbjct: 2 MFLVALLPVLAIIWTTQVLQRINLVTDSGQSIGSFAKLATMILPSIIPVVLPFALVIAIT 61 Query: 75 NVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSA 134 LT+MN ++EL +ID G R LI+P+L LA ++S+F F +NI+EP+ ++ +Q+ A Sbjct: 62 QTLTTMNNDSELTVIDAAGARRSILIRPILLLAAVISVFSFFVDNIVEPRAKTVARQMIA 121 Query: 135 KAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSI 194 + L S +EE F ++D+ LY++ISK L+G+F+ D RD IYYA+ G++ Sbjct: 122 ETYADLLSSVIEEKTFRKIDEGLYVQISKRLAGRMLKGLFVADERDPAYELIYYAKEGAV 181 Query: 195 DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE--SANSSTIVLKANDQNLSFLLN 252 D +I++DGEVHRK+P ++S++ F SY+ + N LKA+D++L FL N Sbjct: 182 DDTGTTLIMHDGEVHRKTPD-GNVSVINFDSYSFDLSDMTENRGQATLKASDRDLWFLFN 240 Query: 253 PNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISL 312 P+PN+ ++ ++YR+E H+RLT W+ PV+F L S+ A + ++HP+ +L Sbjct: 241 PDPNDKDFTIR-PQSYRAELHRRLTDWILPVVFALFSLAIAGDAR-SHREARLHPMVSAL 298 Query: 313 SISFGVFWGFSYIIHKIEQNPYY 335 + +F W Y ++I+ +P Sbjct: 299 AYAFAFRWAAFYAANQIDTDPGI 321 >gi|75675869|ref|YP_318290.1| permease YjgP/YjgQ [Nitrobacter winogradskyi Nb-255] gi|74420739|gb|ABA04938.1| permease YjgP/YjgQ [Nitrobacter winogradskyi Nb-255] Length = 390 Score = 300 bits (768), Expect = 3e-79, Method: Composition-based stats. Identities = 80/358 (22%), Positives = 166/358 (46%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M S + YI R SF++ + + + W+ Q L+ I+L++S +++ L I+ IP + Sbjct: 1 MGSIDKYIFRTTLASFVVVLVSLTGVIWITQALRGIDLMTSQGQTILTFLGITSLAIPVL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +++P + ++ L + ++E+++++ G S L +P L+ +++++ + Sbjct: 61 VLIISPIALMIAVSHTLHKLATDSEIIVMNAAGLSPFRLFRPFLYATVVVALLVAFIAAY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +KQ A+ + + L+ F +LD +L I+I + P L GIFI D R+ Sbjct: 121 LAPDGMRRLKQWDAEITADVLANVLQPGRFAQLDPNLTIRIRERQPGGQLAGIFIDDRRN 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTE--SANSS 236 + A G++ + Q +IL DG + R ++ +++ F Y S Sbjct: 181 SNERLSIIADHGTVMKNDQGSFLILEDGHLERFETGKREPAMVAFDRYAFDMSKFSNRGH 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 +V ++ L L+ P+ +P + +L +R+E H R T ++P F ++ Sbjct: 241 DVVYGIRERYLWELIAPDEKDPLVQ-QLRGQFRAELHDRFTAPIYPFAFAALTFAFLGSP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RQ + + +++ FG+ + ++P + YL LF I L +I Sbjct: 300 RTTRQSRNFS-MGAAIAAVFGLRMAGFALSVMTVKSPMAALLQYLLLFGAIGISLRVI 356 >gi|146340304|ref|YP_001205352.1| putative permease [Bradyrhizobium sp. ORS278] gi|146193110|emb|CAL77121.1| putative permease [Bradyrhizobium sp. ORS278] Length = 389 Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats. Identities = 79/358 (22%), Positives = 167/358 (46%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M S + YI R SF + + + + W+ Q L+ I+L++S +++ L I+G +IP++ Sbjct: 1 MGSIDRYIFRTTLASFALVLVSLTGVIWITQALRGIDLMTSQGQTILTFLGITGLVIPSL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + ++ L + ++E+++++ G S I L P + ++++ + + + Sbjct: 61 LGVIAPIALMIAVSHTLNKLATDSEIIVMNAAGMSPIRLFVPFAYATCVVALLVTLLASY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P IKQ A+ + + L+ F +LD +L I+I + P L+ I I D RD Sbjct: 121 IAPDGLRRIKQWDAEITADVLTNILQPGRFAQLDQNLTIRIGERQPGGELKNILIDDRRD 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE--SANSS 236 + A+ G++ + D ++L DG + R ++ +++ F Y S Sbjct: 181 PKERITIIAEKGTVVKNADGSFLVLEDGNLERFEIGKREPAMVAFARYAFDMSKFSNQGR 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L ++ + L+ P ++P Y+ ++ +R E H R ++P F ++ Sbjct: 241 DVTLGIRERYVWELMAPAEDDPIYK-QIPGQFRQELHDRFLAPIYPFAFAALTFAFLGAP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RQ + L++ GF+ + + + P I Y+ LF + ++ + +I Sbjct: 300 RTTRQSRNFSFGSAILAVFGVRMAGFACSVMTV-KTPIAALIQYVMLFGVLALSIWII 356 >gi|90423816|ref|YP_532186.1| permease YjgP/YjgQ [Rhodopseudomonas palustris BisB18] gi|90105830|gb|ABD87867.1| permease YjgP/YjgQ [Rhodopseudomonas palustris BisB18] Length = 388 Score = 299 bits (766), Expect = 5e-79, Method: Composition-based stats. Identities = 73/360 (20%), Positives = 160/360 (44%), Gaps = 5/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M S + YI R SF + + + W+ Q L+ I+L++S +++ L ++G +P + Sbjct: 1 MGSIDSYIFRTTLTSFAVILASLTGVIWITQALRGIDLMTSQGQTILTFLGLTGMAVPVL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + + L + ++E+++++ G S + L++P +F +++++I + Sbjct: 61 VLVIAPIALMIAVAHTLNRLANDSEIIVMNAAGLSPLRLVRPFMFASVVVAILVGFISAY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ I + ++ + + L+ F +L+ +L I++ + P L G+FI D RD Sbjct: 121 VAPEGLRRINRWDSEITADILANILQPGRFSQLETNLTIRVRERQPGGVLVGVFIDDRRD 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANSST 237 A G++ + D ++L DG + R +D +++ F Y + + Sbjct: 181 PNERISIIADHGTVLKNNDGSFLVLEDGTLQRFESGKRDPALVAFGRYAFDMSKFSRARD 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L LL P P++ Y L +R+E H R+ ++P +F ++ Sbjct: 241 VSYGIRERYLWELLWPEPDDALY-ARLPNQFRAEMHDRVLAPIYPFVFAALTFAFLGLPR 299 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 RQ + + +++ F V P YL L + L +I + Sbjct: 300 TTRQSRNFS-MAGAIAAVFVVRLAGFACSIVASSTPAVAIAQYLLLAAALAGSLWVIARN 358 >gi|170746990|ref|YP_001753250.1| permease YjgP/YjgQ family protein [Methylobacterium radiotolerans JCM 2831] gi|170653512|gb|ACB22567.1| permease YjgP/YjgQ family protein [Methylobacterium radiotolerans JCM 2831] Length = 386 Score = 298 bits (764), Expect = 7e-79, Method: Composition-based stats. Identities = 83/358 (23%), Positives = 175/358 (48%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ E YI R + L + + W+ Q L+ ++LV++ ++L + L ++G +PT+ Sbjct: 1 MRQIERYIFRIALGATLACLIGLTGTIWLTQALRELDLVTAKGQTLLVFLFVTGLSLPTL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + T L +N ++EL+++ G +L++P L LA+ +S + + Sbjct: 61 VVVIAPVALFIGTIYALNKLNGDSELIVMSAAGMPPRSLLRPFLTLALFVSFLVGFLVVV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P ++ + + + + ++E F +LD+ + + P TL+G+FI D R+ Sbjct: 121 VMPASFQELRDVITRVRGDFIANVVKEGQFTQLDNGITFHFRERGPGGTLKGLFIQDRRE 180 Query: 181 TQTHKIYYAQSG-SIDLDRQA-IILNDGEVHRKSPISKDISIMKFKSYTLQT--ESANSS 236 K+Y A+ G ++D+D Q+ +IL +G VH++ S+D SI+ F+ YT+ + S Sbjct: 181 AGKTKVYLAERGNAVDVDGQSYLILENGSVHQQQRESRDSSILTFERYTIDLAAFAPPDS 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + K +++ + LL P+ Y+ + +R+E H RL+ L+P+ I+ A Sbjct: 241 DTIYKPRERSTAQLLFPDTTEGYYKLQK-GRFRAELHDRLSACLYPLALVFIAFAALGDP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RQ + + +++ + G + ++P + +Y + L+I Sbjct: 300 RTTRQGRGVAIAGAIVAVV-ALRIGGFAAVSAAARSPAAVLAVYSVPLVAILLSSLLI 356 >gi|170743203|ref|YP_001771858.1| permease YjgP/YjgQ family protein [Methylobacterium sp. 4-46] gi|168197477|gb|ACA19424.1| permease YjgP/YjgQ family protein [Methylobacterium sp. 4-46] Length = 388 Score = 298 bits (762), Expect = 1e-78, Method: Composition-based stats. Identities = 88/307 (28%), Positives = 152/307 (49%), Gaps = 5/307 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI R +FL + + WV Q L+ ++LV++ +++ I I+G IP + Sbjct: 1 MKQIERYIFRIALGAFLACLAGLTGVIWVTQALRELDLVTAKGQTVLIFFLITGLSIPAL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L +V P M + L +N ++EL+++ G S L++P L LA+++S L Sbjct: 61 LTVVAPVALFMAVVHALNRLNGDSELIVMSAAGMSPRQLLRPFLTLALIVSAALGFLTIQ 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P ++ L + + + ++E F LD+ + + P L GIF+ D R+ Sbjct: 121 VLPSSFQELRDLLTRVRGDFIANVVQEGQFTSLDNGITFHFRESAPGGVLLGIFMQDRRE 180 Query: 181 TQTHKIYYAQSG-SIDLDRQA-IILNDGEVHRKSPISKDISIMKFKSYTLQT--ESANSS 236 Y A+ G ++DLD Q ++L G +HR+ S+D SI+ F Y + + + Sbjct: 181 AGRSVTYLAERGQALDLDGQTYLVLEKGSIHRQQQNSRDASIISFARYAVDLAAFTPPDT 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V K +++ + LL P+PN Y+ + +R+E H RLT WL+P+ LI+ A Sbjct: 241 DTVYKPRERSTAQLLFPDPNEHYYKL-VKGRFRAELHDRLTSWLYPLAMALIAFAALGDP 299 Query: 297 ALVRQRK 303 RQ + Sbjct: 300 RTTRQGR 306 >gi|118590094|ref|ZP_01547497.1| permease YjgP/YjgQ [Stappia aggregata IAM 12614] gi|118437066|gb|EAV43704.1| permease YjgP/YjgQ [Stappia aggregata IAM 12614] Length = 395 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 84/360 (23%), Positives = 173/360 (48%), Gaps = 6/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ E YI+R +F ++ + + W Q L++++LV+S +++ + I+ +P + Sbjct: 1 MKTIERYIIRRTVYAFTLTIAAMTGVVWATQALRQLDLVTSKGQTIVQFIGITMLALPFL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V PF + VL S++ ++EL++ID +G SR ++KPV+ ++++ + Sbjct: 61 IVIVAPFALMIALILVLNSLSGDSELIVIDASGGSRFLVLKPVMLFSLVVMLLTASMSLY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + ++ + + L + ++ F ++D L I + TL G+ + D+RD Sbjct: 121 VAPAGLAQLRTEITRVRADLVANIVKPGRFITVEDGLTFHIRNRSGKGTLDGLLMHDTRD 180 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 +T Y A +G I DR +++ +G + R+ DISI++F+SY + + Sbjct: 181 PETAFTYQADTGQIVEAADRTLLVMQNGTIQRRPKQQGDISIVRFQSYAFDLSNLIPEAG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V KA++++ L++P ++ Y + + E H+R +Q L+ + FGLI K Sbjct: 241 EPVYKASERSTLNLMSPGRHDE-YALKNPDKLVQELHERFSQPLYCLAFGLIVFAFLGKA 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 RQ + + S GF + + +LY+ + + L+ I + Sbjct: 300 RTTRQGRGFAVLGAICSCVLLRTTGFGVTA-ISGTSTVLLSLLYVVPITGAVLALISIFR 358 >gi|188583150|ref|YP_001926595.1| permease YjgP/YjgQ family protein [Methylobacterium populi BJ001] gi|179346648|gb|ACB82060.1| permease YjgP/YjgQ family protein [Methylobacterium populi BJ001] Length = 389 Score = 296 bits (759), Expect = 3e-78, Method: Composition-based stats. Identities = 76/358 (21%), Positives = 160/358 (44%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E YI R +FL + + WV Q L+ ++LV++ ++L + L I+ +PT+ Sbjct: 1 MTQIERYIFRIALGAFLTCLIGLTGTIWVTQALRELDLVTAKGQTLLVFLFITALSLPTL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + L +N ++EL+++ G L++P + LA+ +S+ + Sbjct: 61 ITVIAPVALFIACVYALNKLNGDSELIVMSAAGMPPRQLLRPFVTLALAVSVVVAFLTIQ 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P ++ + + + + ++E F LD+ + + + +LQG+FI D R+ Sbjct: 121 VMPSSFQELRDVLTRVRGDFVANVVKEGQFTALDNGITFHFRERGADGSLQGLFIQDKRE 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT--ESANSS 236 +Y A+ G + + ++L G +HR+ S+D SI+ ++ Y + + + Sbjct: 181 AGKAVVYLAERGRVSEVDGQTYLVLEKGSIHRQQKDSRDSSIVSYERYAVDLAAFTPPDA 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V K +++ LL P+ YR + +R+E H RL+ WL+P+ I+ A Sbjct: 241 ETVYKPRERSTLALLFPDTGEGYYRLQK-GRFRAELHDRLSAWLYPLALAFIAFAALGDP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RQ + + L + + ++P + +Y ++ +I Sbjct: 300 RTTRQGRGLAVAGAVLGVV-ALRIAGFAASSAAVRSPGAVAAVYAAPLGAIALSCFII 356 >gi|298291096|ref|YP_003693035.1| permease YjgP/YjgQ family protein [Starkeya novella DSM 506] gi|296927607|gb|ADH88416.1| permease YjgP/YjgQ family protein [Starkeya novella DSM 506] Length = 385 Score = 296 bits (759), Expect = 3e-78, Method: Composition-based stats. Identities = 77/362 (21%), Positives = 166/362 (45%), Gaps = 6/362 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+ R +FL + L + + W+ Q L+ ++++++ +++ + I+ +P + Sbjct: 1 MNRLDRYVFRSAASAFLGTLLVLTLMIWITQALRELDIMTTQGQTILAFVFITSLALPAL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P M L MN ++E+++ G S ++P++ LA++++ + Sbjct: 61 ILGLAPAALFMAVAYTLFRMNSDSEIVVSSAAGISTWRFLRPLVILALIVAACCSVLSLE 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + ++ + + + F L D + + + N N L GIFI D+RD Sbjct: 121 LVPAAMRQFRYEISRVRADVVAFIAQPGRFTTLADGMVFHVRERNANGVLGGIFINDARD 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE--SANSS 236 + Y A+ G + + D +IL +G +HR++P D ++++F+ Y ++N Sbjct: 181 PKQTNTYLAERGQVVDNKDGTFLILEEGAIHRRTPGKPDSNVVEFQRYAFDLSPFTSNGE 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V +A +++ LLNP+P + Y E + E H+RL+ L+ + F I+ A + Sbjct: 241 NAVYRAPERSFRELLNPDPKDYVYILES-GRFTEELHRRLSLPLYVLAFFGIACAALAEP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R+ + + + + +I++I NP IP +YL L + Sbjct: 300 RTTREGRGLALAATT-PFVIVLQVTSFGLINQIRGNPSVIPFVYLVPAVFIVGSALSLSG 358 Query: 357 KY 358 ++ Sbjct: 359 RF 360 >gi|92117863|ref|YP_577592.1| permease YjgP/YjgQ [Nitrobacter hamburgensis X14] gi|91800757|gb|ABE63132.1| permease YjgP/YjgQ [Nitrobacter hamburgensis X14] Length = 389 Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats. Identities = 75/361 (20%), Positives = 164/361 (45%), Gaps = 6/361 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M S + YI R SF++ + + + W+ Q L+ I+L++S +++ L I+ IP + Sbjct: 1 MGSIDKYIFRTTLASFVVVLVSLTGVIWITQALRGIDLMTSQGQTILTFLGITSLAIPVL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +++P + ++ L + ++E+++++ G S L +P ++ +++++ + Sbjct: 61 VLIISPIALMIAISHTLHKLATDSEIIVMNAAGLSPFRLFRPFIYATVVVALLVAFIAAY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +K+ A+ + + L+ F +LD +L I++ + P L GIFI D R+ Sbjct: 121 LAPDGMRRLKRWDAEITADVLANVLQPGRFAQLDPNLTIRVRERQPGGLLVGIFIDDRRN 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE--SANSS 236 A G++ + + +IL DG + R ++ +++ F+ S Sbjct: 181 PNERLSIVADHGTVMKNDNGSFLILEDGHLERLEAGKREPNMVAFRRNAFDMSKFSNRGH 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 +V ++ L L+ P P +P + +L +R+E H R T ++P F ++ Sbjct: 241 DVVYGIRERYLWELIAPEPTDPLVQ-QLPGQFRAELHDRFTAPIYPFAFAALTFAFLGTP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 RQ + + ++ FG+ + ++P + YL LF + L +I Sbjct: 300 RTTRQSRNFS-MGAAIVTVFGLRMAGFALSVMAVKSPTAPLLQYLLLFAAIGVSLRVIVA 358 Query: 357 K 357 Sbjct: 359 G 359 >gi|240140389|ref|YP_002964868.1| putative permease [Methylobacterium extorquens AM1] gi|240010365|gb|ACS41591.1| putative permease [Methylobacterium extorquens AM1] Length = 389 Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats. Identities = 78/358 (21%), Positives = 159/358 (44%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E YI R +FL + + WV Q L+ ++LV++ ++L + L I+ +PT+ Sbjct: 1 MTQIERYIFRIALGAFLTCLIGLTGTIWVTQALRELDLVTAKGQTLLVFLFITALSLPTL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + L +N ++EL+++ G L++P LA +S+ + Sbjct: 61 ITVIAPVALFIACVYALNKLNGDSELIVMSAAGMPPRQLLRPFATLAFAISVVVAFLTIQ 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P ++ + + + + L+E F LD+ + + + +LQG+FI D R+ Sbjct: 121 VMPSSFQELRDVLTRVRGDFVANVLKEGQFTALDNGITFHFRERGADGSLQGLFIQDKRE 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT--ESANSS 236 +Y A+ G + + ++L G +HR+ S+D SI+ ++ Y + + S Sbjct: 181 AGKAVVYLAERGRVSEVDGQTYLVLEKGSIHRQQKDSRDSSIVSYERYAVDLAAFTPPDS 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V K +++ LL P+ YR + +R+E H RL+ WL+P+ I+ A Sbjct: 241 ETVYKPRERSTMALLFPDTGEGYYRLQK-GRFRAELHDRLSAWLYPLALAFIAFAALGDP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RQ + + + + + ++P + +Y ++ L+I Sbjct: 300 RTTRQGRGLAVAGAVVGV-IALRIAGFAASSAAVRSPGAVVAIYAAPLGAIALSCLLI 356 >gi|91977434|ref|YP_570093.1| permease YjgP/YjgQ [Rhodopseudomonas palustris BisB5] gi|91683890|gb|ABE40192.1| permease YjgP/YjgQ [Rhodopseudomonas palustris BisB5] Length = 388 Score = 296 bits (757), Expect = 5e-78, Method: Composition-based stats. Identities = 72/359 (20%), Positives = 160/359 (44%), Gaps = 5/359 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + + YI R SF + + + W+ Q L+ I+L++S +++ L ++G +P + Sbjct: 1 MGAIDSYIFRTTLTSFAVVMASLTGVIWITQALRGIDLMTSQGQTIVTFLGLTGLAVPVL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + + L + ++E+++++ G S I L +P ++ I +++ + + Sbjct: 61 ILVIAPIALMIAVAHTLNRLATDSEIIVMNAAGLSPIRLFRPFVYATIAVAVLVTLIGAY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P I + ++ + + L+ F +L+ +L I++ + L G+FI D RD Sbjct: 121 IAPDGLRRIARWDSEITADVLANVLQPGRFAQLEQNLTIRVRERQAGGLLVGVFIDDRRD 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANSST 237 A G++ + D ++L DG + R ++ +++ F Y + + Sbjct: 181 PNDRVSIIADHGTVVKNSDGSFLVLEDGHLERFQAGKQEPALVAFSRYAFDMSKFSRARD 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + L L+ P+P +P ++ +R+E H RL ++P F ++ Sbjct: 241 VTYGIREHYLWELIWPDPKDPLL-AQVPTQFRAEMHDRLLAPIYPFFFAAVTFAFLGMPR 299 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 RQ + + +++ +F V + PY I YL L + L +I++ Sbjct: 300 TTRQSRNFS-MVGAVACAFVVRLAGFALSVVANHTPYIAGIQYLLLAVAIGVSLWLIRR 357 >gi|163853056|ref|YP_001641099.1| permease YjgP/YjgQ family protein [Methylobacterium extorquens PA1] gi|218531866|ref|YP_002422682.1| permease YjgP/YjgQ family protein [Methylobacterium chloromethanicum CM4] gi|254562993|ref|YP_003070088.1| permease [Methylobacterium extorquens DM4] gi|163664661|gb|ABY32028.1| permease YjgP/YjgQ family protein [Methylobacterium extorquens PA1] gi|218524169|gb|ACK84754.1| permease YjgP/YjgQ family protein [Methylobacterium chloromethanicum CM4] gi|254270271|emb|CAX26267.1| putative permease [Methylobacterium extorquens DM4] Length = 389 Score = 295 bits (755), Expect = 9e-78, Method: Composition-based stats. Identities = 77/358 (21%), Positives = 159/358 (44%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E YI R +FL + + WV Q L+ ++LV++ ++L + L I+ +PT+ Sbjct: 1 MTQIERYIFRIALGAFLTCLIGLTGTIWVTQALRELDLVTAKGQTLLVFLFITALSLPTL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + L +N ++EL+++ G L++P LA +S+ + Sbjct: 61 ITVIAPVALFIACVYALNKLNGDSELIVMSAAGMPPRQLLRPFATLAFAISVVVAFLTIQ 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P ++ + + + + ++E F LD+ + + + +LQG+FI D R+ Sbjct: 121 VMPSSFQELRDVLTRVRGDFVANVVKEGQFTALDNGITFHFRERGADGSLQGLFIQDKRE 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT--ESANSS 236 +Y A+ G + + ++L G +HR+ S+D SI+ ++ Y + + S Sbjct: 181 AGKAVVYLAERGRVSEVDGQTYLVLEKGSIHRQQKDSRDSSIVSYERYAVDLAAFTPPDS 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V K +++ LL P+ YR + +R+E H RL+ WL+P+ I+ A Sbjct: 241 ETVYKPRERSTMALLFPDTGEGYYRLQK-GRFRAELHDRLSAWLYPLALAFIAFAALGDP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RQ + + + + + ++P + +Y ++ L+I Sbjct: 300 RTTRQGRGLAVAGAVVGV-IALRIAGFAASSAAVRSPGAVVAIYAAPLGAIALSCLLI 356 >gi|316933708|ref|YP_004108690.1| permease YjgP/YjgQ family protein [Rhodopseudomonas palustris DX-1] gi|315601422|gb|ADU43957.1| permease YjgP/YjgQ family protein [Rhodopseudomonas palustris DX-1] Length = 388 Score = 294 bits (754), Expect = 9e-78, Method: Composition-based stats. Identities = 77/360 (21%), Positives = 160/360 (44%), Gaps = 5/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M S + YI R SF + + + W+ Q L+ I+L++S +++ L ++G +P + Sbjct: 1 MGSIDRYIFRTTLVSFAVVMGSLTGVIWITQALRGIDLMTSQGQTIITFLGLTGLAVPVL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + + L + ++E+++++ G S I L +P + ++++ + + Sbjct: 61 VLVIAPIALMIAVAHTLNRLAVDSEIIVMNAAGLSPIRLFRPFFYATMVVAALVTVIGAY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P I + ++ + + L+ F +L+ L I++ + P L G+FI D+RD Sbjct: 121 IAPDGLRRIARWDSEITADVLANVLQPGRFAQLEPGLTIRVRERQPGGILVGVFIDDARD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANSST 237 A G++ + + ++L DG + R ++ +++ F Y + + Sbjct: 181 PNERISIIADHGTVLKNEKGSFLVLEDGHLERFQAGKQEPTLVAFSRYAFDMSKFSRARD 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L LL P ++P L +RSE H RL ++P F ++ Sbjct: 241 VSYGIRERYLWELLFPPADDPLL-ARLPTEFRSEMHDRLLAPIYPFFFATVAFAFLGLPR 299 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 RQ + I L ++F V + + PY + YL L +I L +IK+ Sbjct: 300 TTRQSRNFSMIGAVL-VAFVVRLAGFALSVIANKTPYVAGLQYLLLAVAIAICLWLIKRN 358 >gi|39936124|ref|NP_948400.1| permease YjgP/YjgQ [Rhodopseudomonas palustris CGA009] gi|192291842|ref|YP_001992447.1| permease YjgP/YjgQ family protein [Rhodopseudomonas palustris TIE-1] gi|39649978|emb|CAE28502.1| possible permease [Rhodopseudomonas palustris CGA009] gi|192285591|gb|ACF01972.1| permease YjgP/YjgQ family protein [Rhodopseudomonas palustris TIE-1] Length = 388 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 76/360 (21%), Positives = 157/360 (43%), Gaps = 5/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M S + YI R SF + + + W+ Q L+ I+L++S +++ L ++G +P + Sbjct: 1 MGSIDRYIFRTTLVSFAVVMGSLTGVIWITQALRGIDLMTSQGQTIITFLGLTGLAVPVL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + + L + ++E+++++ G S I L +P + ++++ + I Sbjct: 61 VLVIAPIALMIAVAHTLNRLATDSEIIVMNAAGLSPIRLFRPFFYATMVVAALVIIIGAY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P I + ++ + + L+ F +L+ L I++ + P L G+FI D+R Sbjct: 121 IAPDGLRRIARWDSEITADVLANVLQPGRFAQLEQGLTIRVRERQPGGLLVGVFIDDARA 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANSST 237 A G++ + + ++L DG + R ++ +++ F Y + + Sbjct: 181 PNERVSIIADHGTVVKNDKGSFLVLEDGHLERFQTGKQEPALVAFSRYAFDMSKFSRARD 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L LL P N+P L +RSE H RL ++P F ++ Sbjct: 241 VAYGIRERYLWELLWPAENDPLL-ARLPTEFRSEMHDRLLAPIYPFFFAAVAFAFLGLAR 299 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 RQ + L ++F V + + PY + YL LF + L +I + Sbjct: 300 TTRQSRNFSMAGAVL-VAFVVRLAGFALSVIANKTPYVAGLQYLLLFVATGTCLWLINRN 358 >gi|254473376|ref|ZP_05086773.1| permease YjgP/YjgQ [Pseudovibrio sp. JE062] gi|211957492|gb|EEA92695.1| permease YjgP/YjgQ [Pseudovibrio sp. JE062] Length = 415 Score = 294 bits (752), Expect = 2e-77, Method: Composition-based stats. Identities = 80/344 (23%), Positives = 177/344 (51%), Gaps = 6/344 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ E YI+R +F+++ + + W Q L++++LV+S ++L I+ +P + Sbjct: 19 MKTIERYIIRRSFTAFIVTLAAMTGVVWSTQALRQLDLVTSKGQTLLQFGYITALALPFL 78 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V PF + VL SM+R++EL++I+ +G S+ +++P++ ++ ++ ++ Sbjct: 79 ILIVAPFAMMLAFIIVLNSMSRDSELIVINASGASKWLVLRPIMTFSLCVTALMYFLSIY 138 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + ++ + ++ L + ++ F ++++L I + + L+G+ + D+RD Sbjct: 139 LSPTGLAELRSELTRVRVDLVANIIKPGRFIPIEENLTFHIRNRSGDGVLEGLLLDDARD 198 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 +T Y A++G I D+ +++ DG + R+ +D+SI+ F+SY S + Sbjct: 199 PETSFTYTAETGRIIEAADKTLLVMLDGTIQRRPKGGQDMSIVSFESYGFDLSSMIPEAR 258 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 KA+++ LL+ +P++ +Y + + EFH RL+ L+P+ FGLI Sbjct: 259 EPTFKASERPTFDLLSASPDD-SYAAKHWDKLIVEFHDRLSVPLYPIAFGLIIYAFLGSP 317 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY 340 RQ + + I +++++ + + P P+LY Sbjct: 318 KTTRQDQGLA-ITTTIAVATLLRTAGFGATLIVSSAPDMFPLLY 360 >gi|326408706|gb|ADZ65771.1| permease YjgP/YjgQ family protein [Brucella melitensis M28] gi|326538430|gb|ADZ86645.1| permease YjgP/YjgQ family protein [Brucella melitensis M5-90] Length = 388 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 104/344 (30%), Positives = 194/344 (56%), Gaps = 6/344 (1%) Query: 15 SFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETT 74 F V I W +Q+LQRIN +++S ++ +++ S LIP+ +P+V PF + T Sbjct: 1 MFFAVLGAAVGITWTVQVLQRINFLTTSGQTFQTIVQFSSLLIPSAIPLVMPFALIIAIT 60 Query: 75 NVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSA 134 L++MN+++EL++I+ +G R +++P+L LA +S+ F+ N +EP R ++ + A Sbjct: 61 QTLSTMNQDSELVVINASGAPRSAVMRPILILAATVSVTSFLIANYVEPYARINMRAMIA 120 Query: 135 KAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSI 194 A L ++E F +L D+LYI+I++ + ++ G+FI DS D IYYA G+I Sbjct: 121 NASADLMHVIIQEGTFRKLADNLYIQIAERRADGSIGGLFIADSCDPTLDLIYYAADGAI 180 Query: 195 DLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQT--ESANSSTIVLKANDQNLSFL 250 +++ +GEV R++ +SI+KF SY ++ V+ A D+ L++L Sbjct: 181 ASTPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAGDDFVIFAKDRPLTYL 240 Query: 251 LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFI 310 LNP+ N+P + L TY++E H+R TQW++P+IF +I++ A + ++ F Sbjct: 241 LNPDSNDPMLQTRPL-TYKAELHRRFTQWIYPLIFAMIALAIAGDSR-SHREARVSASFS 298 Query: 311 SLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 ++S + V+W + + +++P YI ++YL + + ++ Sbjct: 299 AISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFIL 342 >gi|115525294|ref|YP_782205.1| permease YjgP/YjgQ [Rhodopseudomonas palustris BisA53] gi|115519241|gb|ABJ07225.1| permease YjgP/YjgQ family protein [Rhodopseudomonas palustris BisA53] Length = 388 Score = 293 bits (751), Expect = 3e-77, Method: Composition-based stats. Identities = 71/359 (19%), Positives = 160/359 (44%), Gaps = 5/359 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M S + YI R SF + + + W+ Q L+ I+L++S +++ L ++ +P + Sbjct: 1 MGSTDSYIFRTTLASFAVILASLTGVIWITQALRGIDLMTSQGQTILTFLGLTSMAVPVL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + + L + ++E+++++ G S + L++P ++ A ++++ + Sbjct: 61 ILVIAPLALMIAVAHTLNRLATDSEIIVMNAAGLSPLRLMRPFMYAAAVVALLVGFIGAY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ I ++ + + L+ F +L+ +L I++ + P L G+FI D RD Sbjct: 121 VAPEGLRRINNWDSEITADILANILQPGRFAQLEQNLTIRVRERQPGGLLVGVFIDDRRD 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANSST 237 + A G++ + D ++L DG + R +D +++ F Y + + Sbjct: 181 PKERVSIIADHGTVLKNADGSFLVLEDGTLQRFELGKRDPALVAFGRYAFDMSKFSKARD 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L L+ P P +P L +R+E H RL ++P F ++ Sbjct: 241 VTYGIRERYLWELIWPQPGDPLV-ARLPNQFRAEMHDRLMAPIYPFAFAALTFAFLGMPR 299 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 RQ + ++ GF+ I NP++ + YL L ++ + + + Sbjct: 300 TTRQSRNFSVAGAIAAVFLLRLAGFACSIMT-NTNPWFAALQYLLLAGAIALGMWISAR 357 >gi|86749600|ref|YP_486096.1| permease YjgP/YjgQ [Rhodopseudomonas palustris HaA2] gi|86572628|gb|ABD07185.1| permease YjgP/YjgQ [Rhodopseudomonas palustris HaA2] Length = 388 Score = 292 bits (748), Expect = 5e-77, Method: Composition-based stats. Identities = 75/360 (20%), Positives = 158/360 (43%), Gaps = 5/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M S + YI R SF + + + W+ Q L+ I+L++S +++ L ++G +P + Sbjct: 1 MGSIDSYIFRTTLTSFAVVMASLTGVIWITQALRGIDLMTSQGQTIVTFLGLTGLAVPVL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + + L + ++E+++++ G S + L +P ++ I ++ + + + Sbjct: 61 ILVIAPIALMIAVAHTLNRLATDSEIIVMNAAGLSPLRLFRPFVYATIFVAALVTLIGSY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P I + A+ + + L+ F +L+ +L I++ + L G+FI D RD Sbjct: 121 IAPDGLRRIARWDAEITADVLANVLQPGRFAQLEQNLTIRVRERQAGGLLVGVFIDDRRD 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANSST 237 A G++ + D ++L DG + R ++ +++ F Y + + Sbjct: 181 PADRVSIIADHGTVLKNKDGSFLVLEDGHLERFQGGKQEPTLVAFSRYAFDMSKFSRARD 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + L L+ P+P +P +L +RSE H RL ++P F ++ Sbjct: 241 VAYGIREHYLWELIWPDPKDPLL-AQLPTQFRSEMHDRLLAPIYPFFFAAVTFAFLGMPR 299 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 RQ + I L +F V + PY + YL L + + +I++ Sbjct: 300 TTRQSRNFSMIGAVL-CAFVVRLAGFALSVVANHTPYIAGLQYLLLAVAIAASVWLIRRN 358 >gi|110634108|ref|YP_674316.1| permease YjgP/YjgQ [Mesorhizobium sp. BNC1] gi|110285092|gb|ABG63151.1| permease YjgP/YjgQ [Chelativorans sp. BNC1] Length = 416 Score = 292 bits (747), Expect = 6e-77, Method: Composition-based stats. Identities = 112/363 (30%), Positives = 186/363 (51%), Gaps = 7/363 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YILR F S +++ I W Q+L R++LV+SS +S ++ +P+V Sbjct: 24 MKVIERYILRRTLAIFAASLAWLLVIVWTTQVLNRLDLVTSSGQSAATFFTVAFLTLPSV 83 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P++ PF + L +MN ++EL++I G+ R T+I P+L +AI+ SI F N Sbjct: 84 VPVIMPFVIGIAVAQTLATMNADSELVVISAAGSPRSTIIWPILIIAIIASIAAFAINNT 143 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R ++ + A A L + L E F ++ D ++++IS+ PN L GIF++DSRD Sbjct: 144 LEPYSRQKMRTILANANADLITTVLREGSFRKVVDGIFVQISERLPNGELGGIFVIDSRD 203 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST- 237 Y A+ G+ ++L +GEV R + D+S+++F SY + Sbjct: 204 PNLKLAYRAERGATVKRDGGNILVLLEGEVQR-QVANGDVSVIRFDSYAFDLSQFTNGEG 262 Query: 238 -IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 L D+ LS LL P+PN+ + + +++R+E H R ++WL+P++F LI I A Sbjct: 263 VPTLFPKDRYLSELLEPDPNDKFF-AKNPQSFRAELHTRFSEWLYPIVFALIGIAVAGDA 321 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R ++HP+ +L+I V W Y ++ E P Y +LY + I Sbjct: 322 RSFR-ETRLHPMVTTLTIGLLVRWAGFYASNEAETVPAYTYLLYAAPLGTILLCCWFIAT 380 Query: 357 KYT 359 Sbjct: 381 NRV 383 >gi|23008753|ref|ZP_00050063.1| COG0795: Predicted permeases [Magnetospirillum magnetotacticum MS-1] Length = 339 Score = 291 bits (744), Expect = 2e-76, Method: Composition-based stats. Identities = 73/341 (21%), Positives = 151/341 (44%), Gaps = 6/341 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E YI R +FL + + WV Q L+ ++LV++ ++L + L I+G +PT+ Sbjct: 1 MTQIERYIFRIALGAFLTCLIGLTGTIWVTQALRELDLVTAKGQTLLVFLFITGLSLPTL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + L +N ++EL+++ G L++P + LA+ +S+ Sbjct: 61 ITVIAPVALFIACVYALNRLNGDSELIVMSAAGMPPRQLLRPFVTLALAISVVTAFLTIQ 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P ++ + + + + ++E F LD + + + +LQG+FI D R+ Sbjct: 121 VMPSSFQELRDVLTRVRGDFVANVVKEGQFTALDSGITFHFRERGADGSLQGLFIQDKRE 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT--ESANSS 236 +Y A+ G + + ++L G +HR+ S+D SI+ ++ Y + + S Sbjct: 181 AGKAVVYLAERGRVTEVDGQTYLVLEKGSIHRQQKDSRDSSIVSYERYAVDLAAFTPPDS 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V K +++ LL P+ Y + + +E +RL+ W +P++ I+ Sbjct: 241 ETVYKPRERSTLALLFPDTREGYYVLQK-GRFWAELDERLSAWFYPLVLAFIAFDRLGDP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP 337 RQ + + L + G+ G + P + Sbjct: 300 RTTRQGRGMAVAGAVLGVV-GLRIGGFDASSADVRKPGAVG 339 >gi|254501938|ref|ZP_05114089.1| putative permease, YjgP/YjgQ family [Labrenzia alexandrii DFL-11] gi|222438009|gb|EEE44688.1| putative permease, YjgP/YjgQ family [Labrenzia alexandrii DFL-11] Length = 395 Score = 289 bits (740), Expect = 4e-76, Method: Composition-based stats. Identities = 80/362 (22%), Positives = 170/362 (46%), Gaps = 6/362 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + E YI+R +F ++ + + W Q L++++LV+S +++ + I+ +P + Sbjct: 1 MNTLERYIIRRTAYAFTLTLAAMTGVVWATQALRQLDLVTSKGQTIVQFIGITMLALPFL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V PF + VL S++ ++EL++ID +G SR ++KPVL A ++ + + Sbjct: 61 IVTVAPFALMIALILVLNSLSGDSELIVIDASGGSRFLVLKPVLAFATIIMLLVSALSLY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + ++ + + L + ++ F +++ L I + TL G+ + D+RD Sbjct: 121 VAPAGLAQLRTEITRVRADLVANIVKPGRFINVEEGLTFHIRNRSGKGTLDGLLMHDTRD 180 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 T Y A++G+I R +++ +G + R+ D+SI++F+SY + +S Sbjct: 181 PDTAFTYQAETGNIVEAAGRTLLVMQNGTIQRRPKQVGDMSIVRFQSYAFDLSNLIPEAS 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V K ++++ + LL P P N + E R+E H+R + L+ + F LI Sbjct: 241 EPVFKPSERSTANLLGP-PGNDYFAVTHPERLRAEIHERFSLPLYCLSFALIVFAFLGVA 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 RQ + + + +++ + I + + Y+ + L+ I + Sbjct: 300 RTTRQGRGMAIVG-AITCCVLLRTTGFGITAISNDSAVLYAMRYVVPVLGGGLALVSILR 358 Query: 357 KY 358 + Sbjct: 359 GH 360 >gi|307946743|ref|ZP_07662078.1| permease YjgP/YjgQ family protein [Roseibium sp. TrichSKD4] gi|307770407|gb|EFO29633.1| permease YjgP/YjgQ family protein [Roseibium sp. TrichSKD4] Length = 395 Score = 289 bits (739), Expect = 6e-76, Method: Composition-based stats. Identities = 86/358 (24%), Positives = 169/358 (47%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ E YI + F M+ + + W Q L++++LV+S +++ + I+ +P + Sbjct: 1 MKTLERYIFKRAIGVFFMAMAAMAGVVWSTQALRQLDLVTSKGQTIVQFIGITMLALPFL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L +V PF + VL +++ ++EL++ID TG SR ++KPVL ++ Sbjct: 61 LVIVAPFALMIALVLVLNALSGDSELIVIDATGGSRFLVLKPVLIFTAAVTALTATLSIY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +++ + + L + ++ F +D L I + N TL G+ + D RD Sbjct: 121 VAPLGLGELREEITRVRADLVANIVKPGHFINMDAGLTFHIRNRSGNGTLDGLLLHDVRD 180 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 T Y + +G I DR +++ +G + RK + +ISI++F+SY + +S Sbjct: 181 KDTAFTYQSDTGHIVEVADRTLLVMQNGTIQRKPKGAGEISIVRFQSYAFDLSNLIPEAS 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V KA++++ LLNP PN+ Y + + +E H+R +Q L+ + F L+ K Sbjct: 241 EPVYKASERSTMNLLNPPPND-AYALQHPDKLLAELHERFSQPLYCLAFALVVFAFLGKA 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RQ + I + +++ + + + +LY+ ++ + I Sbjct: 300 RTTRQGRGIAILG-AITTCILLRTAGFGVTAIASGFTGLLLLLYVVPIAAMAVSVWSI 356 >gi|328544011|ref|YP_004304120.1| permease YjgP/YjgQ [polymorphum gilvum SL003B-26A1] gi|326413755|gb|ADZ70818.1| Permease YjgP/YjgQ [Polymorphum gilvum SL003B-26A1] Length = 395 Score = 286 bits (733), Expect = 3e-75, Method: Composition-based stats. Identities = 88/358 (24%), Positives = 171/358 (47%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ E YI+R G +F+M+ + + W Q L++++LV+S +++ + I+ +P + Sbjct: 1 MKTLERYIVRRAGIAFVMTLAAMTGVVWATQALRQLDLVTSKGQTIVQFVGITMLAMPFL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V PF + VL +++ ++EL++I+ +G SR +++PV+ + + + Sbjct: 61 VLVVAPFALMIALILVLNALSSDSELIVINASGGSRFLVLRPVVLFSAAIMLLSATLSLY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + ++ A+ ++ L + + F ++D L I + +L G+ + D RD Sbjct: 121 VAPLGLAQLRDEIARVRVDLVANIVRPGRFITVEDGLTFHIRNRRGDGSLDGLLLHDRRD 180 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 QT Y A G I DR +++ DG + R+ DISI++F+SY + +S Sbjct: 181 PQTVFTYQADVGRIVEAADRTLLLMQDGTIQRRPKTDGDISIVRFQSYAFDLSALIPETS 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 T + KA+++ LL + +Y + + R+E H RL+Q L+P+ FGLI + Sbjct: 241 TPIYKASERPTLALLLGTHQD-DYARQNADRLRAELHDRLSQPLYPLAFGLIVFAFLGQA 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RQ + + + +L G+ + I YL + L I Sbjct: 300 RTTRQGRGMA-MLGALVACIGLRTAGFGVSTLISGQASLTLGYYLVPLIGIGVALWTI 356 >gi|209885016|ref|YP_002288873.1| permease YjgP/YjgQ [Oligotropha carboxidovorans OM5] gi|209873212|gb|ACI93008.1| permease YjgP/YjgQ [Oligotropha carboxidovorans OM5] Length = 385 Score = 285 bits (729), Expect = 8e-75, Method: Composition-based stats. Identities = 81/361 (22%), Positives = 166/361 (45%), Gaps = 7/361 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + S + Y++R SFL+ + + + WV Q L+ I+L+++ +++ + L I+G IP + Sbjct: 2 LGSIDAYVVRSTLLSFLIVLISLTGVIWVTQALRGIDLMTAQGQTVLVFLGITGLAIPVL 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + T+ L + ++E+++++ G S ++P ++ ++++ + Sbjct: 62 ALIIAPLAILLAVTHTLNRLATDSEIIVMNAAGLSPWRFLRPFMYSTVIVACLISFLAVF 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+C +++ + + + L+ F RL D L +++ + P L G+FI D R+ Sbjct: 122 LAPECLRALRRWHTEIGADVLANVLQPGQFIRL-DKLVLRVQERRPGGVLVGVFIDDQRN 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTE--SANSS 236 AQ+G + + ++L+DG + R KD I+ FKSY S Sbjct: 181 PAERINITAQNGVVQKTDKGSFLVLSDGNLQRFQADKKDPLIVAFKSYAFDMSQFSQAPQ 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 T A ++ +S L++P P + L +R+E H RL L+P +F +++ Sbjct: 241 TYNYNARERFISELISP-PKDDQVAQRSLGQFRAELHDRLLAGLYPFVFVILAFAFLGPP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 RQ + I + + + V G P I + Y L ++++ MI K Sbjct: 300 RTTRQGRNFA-ISMLILVVLVVRIGGYACSTIAVSQPAAIAVQYAMLLAVAALSGWMIVK 358 Query: 357 K 357 Sbjct: 359 G 359 >gi|296532233|ref|ZP_06894980.1| permease YjgP/YjgQ [Roseomonas cervicalis ATCC 49957] gi|296267440|gb|EFH13318.1| permease YjgP/YjgQ [Roseomonas cervicalis ATCC 49957] Length = 381 Score = 284 bits (726), Expect = 2e-74, Method: Composition-based stats. Identities = 78/373 (20%), Positives = 162/373 (43%), Gaps = 14/373 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+ R +G L + + + W+ Q L+ I LV SL + ++++G L+P+ Sbjct: 1 MTRLDRYLFRQLGIGLLAVTIGLAALVWLTQSLRFIELVLDRGLSLAVFVELTGLLLPSF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + T +N + EL+++ G S L +P L +A L + F + Sbjct: 61 FAVILPITTFVVTLFSYVRLNGDRELVVMRAAGLSDWQLSRPALLIATLATGFCLFLQLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + + + L+E +F L DDL + + + TL+GI + D R+ Sbjct: 121 LVPVSHAAFRSWQFEIRNEMAAILLQEGVFSSLGDDLTVYARRREADGTLRGILVHDMRE 180 Query: 181 TQTHKIYYAQSGSIDLD--RQAIILNDGEVHRKSPIS----KDISIMKFKSYTLQTESAN 234 T AQ G + +IL +G+ + P + +S++ F ++ S++ Sbjct: 181 PGTPVTIMAQEGRLVSTPAGPRVILLNGQREQLEPATATHPARLSVLSFAENSVDLASSS 240 Query: 235 SST----IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 S + ++ + LLNP+P N + +R+E H+RL + ++ + Sbjct: 241 RSPVDVARNRDSRERFVPELLNPDPA-ENLPERDIRKFRAEGHQRLASPFTALSMAMVGL 299 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC--ISS 348 A R+ P I +++ + I + ++ YIP+++L + + Sbjct: 300 AVALASGF-RRHGDWRPAAIGVALVVALLALGLAIGNLAARDNRYIPLIWLHTLGPVLGA 358 Query: 349 IFLLMIKKKYTKI 361 ++L + + KI Sbjct: 359 AWVLSGRPGWPKI 371 >gi|306842048|ref|ZP_07474721.1| permease YjgP/YjgQ family protein [Brucella sp. BO2] gi|306287889|gb|EFM59309.1| permease YjgP/YjgQ family protein [Brucella sp. BO2] Length = 371 Score = 283 bits (723), Expect = 4e-74, Method: Composition-based stats. Identities = 103/332 (31%), Positives = 192/332 (57%), Gaps = 9/332 (2%) Query: 32 ILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDN 91 +LQRIN +++S ++ +++ S LIP+ +P+V PF + T L++MN+++EL++I+ Sbjct: 1 MLQRINFLTTSGQTFQTIVQFSSLLIPSAIPLVMPFALIIAITQTLSTMNQDSELVVINA 60 Query: 92 TGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFF 151 +G R +++P+L LA +S+ F+ N +EP R ++ + A A L ++E F Sbjct: 61 SGAPRSAVMRPILILAATVSVTSFLIANYVEPYARINMRAMIANASADLMHVIIQEGTFR 120 Query: 152 RLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQA--IILNDGEVH 209 +L D+LYI++++ + ++ G+FI DSRD IYYA G+I +++ +GEV Sbjct: 121 KLADNLYIQVAERRADGSIGGLFIADSRDPTLDLIYYAADGAIASTPSGDMLLMENGEVQ 180 Query: 210 RKSPISKDISIMKFKSYTLQT--ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLET 267 R++ +SI+KF SY ++ V+ A D+ L++LLNP+PN+P + L T Sbjct: 181 RRNVSDGTVSIIKFDSYAFDLNQFASAGDDFVIFAKDRPLTYLLNPDPNDPMLQTRPL-T 239 Query: 268 YRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH 327 YR+E H+R TQW++P+IF +I++ A + ++ F ++S + V+W + Sbjct: 240 YRAELHRRFTQWIYPLIFAMIALAIAGDSR-SHREARVSASFSAISTALLVYWAGYFASD 298 Query: 328 KIEQNPYYIPILYLFL---FCISSIFLLMIKK 356 + +++ YI ++YL F ++ LL ++ Sbjct: 299 RADKDSSYILVMYLVPLVVFLVTGFILLTGRR 330 >gi|300023217|ref|YP_003755828.1| permease YjgP/YjgQ family protein [Hyphomicrobium denitrificans ATCC 51888] gi|299525038|gb|ADJ23507.1| permease YjgP/YjgQ family protein [Hyphomicrobium denitrificans ATCC 51888] Length = 398 Score = 281 bits (720), Expect = 8e-74, Method: Composition-based stats. Identities = 79/362 (21%), Positives = 167/362 (46%), Gaps = 7/362 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ F Y+ R SF + + + I W+ L++ N+V+S + +L+K++ +P + Sbjct: 1 MRIFSKYVFRQAAGSFALIMVSLTGIVWIALALRQFNVVTSQGQDTWMLIKMTSLAVPNL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ PF F + + L +N ++EL++I +G T +P+L LA+L+SIFL + Sbjct: 61 MAVIAPFSFLIAALHTLNRLNTDSELIVISASGAKVWTAARPLLLLALLVSIFLAFVSHF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +P ++ + + L ++ F + L I + N L G+ + D+RD Sbjct: 121 AQPWSMRQLRDYMVQVRSDLLTQVIQPGRFTSPETGLMFHIRDRDANGELLGLVMHDTRD 180 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT---ESANS 235 + Y A+ G++ +++ G + R++ + I+ F Y + E + Sbjct: 181 KAQSQSYLAEHGTLVKQDGTAYLVMTVGHIIRRTDANGPPQIVAFDKYIVDLDRFEPQDG 240 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 LK ++ S L+NP+P + +Y+ + +RSE H+R L+P+ F + I + Sbjct: 241 GPGDLKPRERYFSELINPDPESSSYKNQ-PGQFRSELHERFVTPLYPLAFAFLIIAFVGQ 299 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 R ++ + ++ I+ I + + +NP + + Y L+++K Sbjct: 300 AQSTR-TSRMQSLVVTFVIAATCRLAGLAITNAMVRNPSMVAVAYGLPIGAIVYSLIVLK 358 Query: 356 KK 357 + Sbjct: 359 RS 360 >gi|163746448|ref|ZP_02153806.1| hypothetical protein OIHEL45_13625 [Oceanibulbus indolifex HEL-45] gi|161380333|gb|EDQ04744.1| hypothetical protein OIHEL45_13625 [Oceanibulbus indolifex HEL-45] Length = 377 Score = 279 bits (713), Expect = 6e-73, Method: Composition-based stats. Identities = 67/371 (18%), Positives = 141/371 (38%), Gaps = 15/371 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YIL + F L +V + W+ + + + + +S + L+ + +P + Sbjct: 1 MARIDRYILSQLLVMFGFFALVLVALFWINRAVVLFDRLIGDGQSALVFLEFTALGLPKL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + V M+ +EL ++ G+ L +PV + + + + + Sbjct: 61 IVTVLPIATFAASVYVTNRMSGESELTVLQAAGSGPWRLARPVFVFGLCVGLMMTALSHF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + +KQ A+ LT L E F D++ + + L+ +F+ D R Sbjct: 121 LVPMAQGQLKQREAEISRNLTAQLLTEGTFLHPSDEVTFYTRAIDNDGVLRDVFLSDRRK 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 IY A + + D +I+ +G R ++ KF+ ++ S+ Sbjct: 181 ADEGVIYTAAEAYLARNGDNTTLIMLNGMAQRLDTEQNRLATAKFRDFSFDISPLVSTD- 239 Query: 239 VLKANDQNLSFLLNPN--PNNPNYRPEL---LETYRSEFHKRLTQWLFPVIFGLISIVAA 293 A DQ++S ++ P+ + +L E H RL Q LF ++ +I Sbjct: 240 --DATDQSVSSMVTPDLLWDWAGLAAQLDTAPGIIAEELHSRLAQPLFCIVAAMIGFATL 297 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 R I+ + + ++ +I + P+ YL + + L M Sbjct: 298 ILGGFSR-FGVWREAVIAFGLLIAIDGLRGTLVVQIRETAALWPLAYLPSLIGAVLTLAM 356 Query: 354 I----KKKYTK 360 + ++ + Sbjct: 357 LWQAAHPRWIR 367 >gi|330993929|ref|ZP_08317859.1| hypothetical protein SXCC_03824 [Gluconacetobacter sp. SXCC-1] gi|329758875|gb|EGG75389.1| hypothetical protein SXCC_03824 [Gluconacetobacter sp. SXCC-1] Length = 388 Score = 278 bits (712), Expect = 8e-73, Method: Composition-based stats. Identities = 67/357 (18%), Positives = 158/357 (44%), Gaps = 6/357 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + Y+LR + + + + +V + W+ Q L ++LV SL + L+++G LIP+ Sbjct: 15 LSILDGYMLRQLLLALVATTGALVTLIWLTQSLHFVSLVVGRGLSLRVFLELTGLLIPSF 74 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + + + + EL ++ G S + +P L A + ++ + Sbjct: 75 VAVILPITTFVVVQFIYQRLGGDRELTVMQAAGLSPALMARPGLMCAAIATLVCLVLNVW 134 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P +Q + + + +++ +F ++ D++ + I + + TL GI + D R Sbjct: 135 IVPVSYHAFRQYEFQIRNRMAAFLIQDGVFTQVSDNMTVYIRARDKDGTLHGIMVEDDRT 194 Query: 181 TQTHKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS-T 237 A+ G++ D+ ++L +G + ++++ F T+ S +++ T Sbjct: 195 PGAEATILAEEGNLVIINDQPRVVLFNGSRQEIDSHTGRLNVLTFTRNTIDLSSPHTAHT 254 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + AN+ +++ LL+P+ + Y E +RL+ F +I +V A + Sbjct: 255 RLPDANELSIAQLLHPDLHQ--YSRRDESKMFIEAWRRLSTPFCAFSFAMIGLVGAMGGS 312 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RQ + P+ L++ V + + +N +P+++L + +M+ Sbjct: 313 HSRQAGIVRPVLAILAVV-AVQALTLLVQNLASRNLQLMPLMWLCTVGPGIVCAIML 368 >gi|110680306|ref|YP_683313.1| hypothetical protein RD1_3119 [Roseobacter denitrificans OCh 114] gi|109456422|gb|ABG32627.1| membrane protein, putative [Roseobacter denitrificans OCh 114] Length = 375 Score = 276 bits (705), Expect = 5e-72, Method: Composition-based stats. Identities = 65/358 (18%), Positives = 140/358 (39%), Gaps = 5/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L + F L +V I W+ + + + + S +S + L+ + +P + Sbjct: 1 MVRLDRYMLSQLLVLFGFFALVLVAILWINRGVSLFDELISDGQSALVFLEFTALGLPKL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P V MN +EL ++ TG+ + L +PVL +++ + + ++ Sbjct: 61 ITTVLPIATFAAAVYVTNRMNNESELTVLQATGSGPVRLARPVLVFGLIVFLMASMLHHV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + T L E F + + + + + L+ +F+ D R Sbjct: 121 LMPLAQQQLGHRQNEIAQNATSRLLTEGRFLHPSEGVTFYTQEIDDDGVLRDVFLSDRRS 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 + IY A + D +R ++I+ DG R + + ++ F+ ++ + N Sbjct: 181 VEEGVIYTAAHAYLIRDDERTSLIMVDGLAQRLTTATDRLATANFRDFSFDISALVQNDV 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + LL P + FH R+ LF ++ LI Sbjct: 241 SQRLDPDKMTTFQLLTPWDELSRETGRSIGKITQSFHARIADPLFCIVAALIGFSTLMIG 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R + ++ + + S + + ++P P+LYL F + + + M+ Sbjct: 301 GFSRFG-VWREVGVAFVLLVAIDGLRSTLQSPVRRDPELWPLLYLPTFISALLVIAML 357 >gi|260427478|ref|ZP_05781457.1| permease YjgP/YjgQ [Citreicella sp. SE45] gi|260421970|gb|EEX15221.1| permease YjgP/YjgQ [Citreicella sp. SE45] Length = 379 Score = 276 bits (705), Expect = 5e-72, Method: Composition-based stats. Identities = 67/361 (18%), Positives = 134/361 (37%), Gaps = 5/361 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ F+ Y+L + F L +V + W+ + + + + ++ + I L+ + +P V Sbjct: 1 MQRFDRYMLSQLMVVFGFFALVLVMVYWLNRSVGLFDELIANGHTAGIFLEFTLLALPGV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V P V M+ +EL ++ TG S L +PVL ++ + I ++ Sbjct: 61 VAIVLPMAAFGAAVYVTNRMSNESELTVLQATGLSPWRLARPVLVFGAIIGAMMAILSHV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +++ ++ +++ L E F + I P L+ +F+ D RD Sbjct: 121 LVPASIGQLRERESEISGSVSARLLHEGTFLHPTRGVTFYIRDITPEGELRDVFLSDRRD 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 Y AQS + D D + + G + +S F++ T + Sbjct: 181 PDRAIAYTAQSAYVLRDDDGPKLTMRSGLAQTLRAEDQTLSTTDFENLTYDISGLVTQNG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 +A + LL + + E H R Q L V+ LI A Sbjct: 241 PPRRRARQISTWELLTDTEAVSEEVKDSVGEVLEEAHMRFEQPLLCVVAALIGYAALMTG 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R + + F + S + + N P++YL I +++++ Sbjct: 301 GFSRFGVTKQIVGAIFLLVF-IKIVESMVTTPVHANAALWPLIYLPSIVGLIIAGVLLQR 359 Query: 357 K 357 Sbjct: 360 S 360 >gi|162149095|ref|YP_001603556.1| permease [Gluconacetobacter diazotrophicus PAl 5] gi|209545162|ref|YP_002277391.1| permease YjgP/YjgQ family protein [Gluconacetobacter diazotrophicus PAl 5] gi|161787672|emb|CAP57268.1| putative permease [Gluconacetobacter diazotrophicus PAl 5] gi|209532839|gb|ACI52776.1| permease YjgP/YjgQ family protein [Gluconacetobacter diazotrophicus PAl 5] Length = 398 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 70/354 (19%), Positives = 143/354 (40%), Gaps = 6/354 (1%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + Y+LR + + L + + + W+ Q L ++LV SL + + ++ L+P+ + + Sbjct: 21 LDRYVLRQLLVALLATTGGLSALIWLTQSLHFVSLVVERGLSLRVFIGLTSLLVPSFVAV 80 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 + P + V + + EL ++ G S + + L A + + I I P Sbjct: 81 ILPITTFIVVQFVYQRLAGDRELTVMRAAGLSPFFIARAGLLCATISVVSCMILNIWIVP 140 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 KQ + + + L+E +F + + + + + + TL GI + D R Sbjct: 141 LSFHAFKQYEFQIRNRMAAFMLQEGVFTPVSPTMTVYVRSRDRDGTLHGIVVEDDRQPDN 200 Query: 184 HKIYYAQSGS--IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 AQ G+ + ++ ++L DG S ++++ F T+ S+ + Sbjct: 201 PSTVLAQRGTMLVVDNQPRVVLYDGSRQEIDRKSGRLNVLTFSRNTIDLTSSRGDQARFR 260 Query: 242 -ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 A + +L LL+P+P P + E +RLT F ++ +VA + A R Sbjct: 261 DATEMSLHELLHPDPQE--VAPRDRGKFAVEAWRRLTAPFTAFSFAMVGLVAVLRGAFSR 318 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 I P LS+ + + + +N IP++++ LM+ Sbjct: 319 HGNIIRPAVAILSVV-SLLALSLMVQNLASRNTSLIPLMWVEAILPGIACALML 371 >gi|58038773|ref|YP_190737.1| hypothetical protein GOX0298 [Gluconobacter oxydans 621H] gi|58001187|gb|AAW60081.1| Hypothetical transmembrane protein [Gluconobacter oxydans 621H] Length = 390 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 62/355 (17%), Positives = 146/355 (41%), Gaps = 6/355 (1%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + YILR + + L + W+ Q L +++V SL + ++++ ++P+ + Sbjct: 15 LLDRYILRQLLIALLALTGGATALIWLTQSLHFVSMVVQHGLSLRVFIQLTSLMLPSFIA 74 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + M + EL ++ G S + L +P L A + ++ + Sbjct: 75 VILPITTFLVVLFTYQRMVGDRELTVMRAAGRSPLELARPGLLCAFFSVVLCYVLTLWLA 134 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + + + + L++ +F L +D+ + + + L G+ + D RD Sbjct: 135 PVSYHAFHRYEFQIRNRMAAFLLQDGVFTSLSNDMTVYVRGRTSDGQLHGVLVEDDRDPD 194 Query: 183 THKIYYAQSGS--IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI-V 239 +H A+ G+ + D+ ++L DG + ++++ F T+ S+ Sbjct: 195 SHTTILAERGTMVVVNDQPRVVLYDGSREEIDRHTGRLNVLTFGRNTIDLTSSRQHNHED 254 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 ++ +L L +P+P+ + R +RLT L + F +I +V + A Sbjct: 255 RDPDEMSLRELFHPDPHEVSERDR--GKNIVVGWRRLTSPLTALSFAMIGLVTVLRGAFS 312 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R P+ L++ G+ + + ++ +P+++L + + M+ Sbjct: 313 RHGNITRPLIAILTVV-GLLAISLMLQNLAGRHLALVPLIWLEAILPAVVCAAML 366 >gi|154246777|ref|YP_001417735.1| permease YjgP/YjgQ family protein [Xanthobacter autotrophicus Py2] gi|154160862|gb|ABS68078.1| permease YjgP/YjgQ family protein [Xanthobacter autotrophicus Py2] Length = 405 Score = 273 bits (699), Expect = 3e-71, Method: Composition-based stats. Identities = 84/386 (21%), Positives = 171/386 (44%), Gaps = 29/386 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI +FL + + + W Q L++++LV+S +++ + I+ +PT+ Sbjct: 1 MGRLDRYIFSTAAVAFLGVVVVLAGMIWATQALRQLDLVTSQGQTIIAFVAITSLTMPTL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + T L +N ++E++++ + G L++P++ LA+L+S F + Sbjct: 61 VLVIAPAALFIATAYTLLKLNGDSEIVVMASAGMGPWRLLRPLIILALLVSAFCALLAIK 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +T ++ K + + + F L L + + PN ++GIFI D+RD Sbjct: 121 VVPASLATFREQVTKVRADVVSFVAQPGRFVNLSQGLVFHVRERAPNGVMRGIFINDARD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISK---------------------D 217 Y A G I ++L +G + R+ +K + Sbjct: 181 DGV-STYLADRGQIIESDAGIFLVLENGSIQRRGGAAKEAEKDASEANKDAGKDKGKSSN 239 Query: 218 ISIMKFKSYTLQTES--ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKR 275 S+++F+ Y S NS +K ++ LS+++NP P + Y YR E HKR Sbjct: 240 SSVVEFQRYAFDLSSLAPNSQGQDVKPMERPLSYVMNP-PQDDLYVRFFPGRYREELHKR 298 Query: 276 LTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY 335 L+ L+P+ F I+ A RQ ++ + + V G I +++ Sbjct: 299 LSAGLYPMAFFAIAAAALASPRTTRQS-QVAALGAIIPAMGLVQIGNFAIAGQLKTQAAA 357 Query: 336 IPILYLFLFCISSIFLLMIKKKYTKI 361 +P++YL ++ M+ + + ++ Sbjct: 358 VPLIYLLPIVTVALC-AMVVQGWIRL 382 >gi|258542097|ref|YP_003187530.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-01] gi|256633175|dbj|BAH99150.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-01] gi|256636232|dbj|BAI02201.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-03] gi|256639287|dbj|BAI05249.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-07] gi|256642341|dbj|BAI08296.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-22] gi|256645396|dbj|BAI11344.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-26] gi|256648451|dbj|BAI14392.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-32] gi|256651504|dbj|BAI17438.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654495|dbj|BAI20422.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-12] Length = 401 Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats. Identities = 78/357 (21%), Positives = 156/357 (43%), Gaps = 11/357 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + + Y+ + + L + + + W++Q L+ ++LV SL + ++++ LIP+ + Sbjct: 33 TLDRYVFHQLLVALLATTGGLAALIWLMQSLRFVSLVVDRGLSLRVFIELTSLLIPSFVA 92 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + + V + + EL ++ G S+ L + L A++ +I F+ I Sbjct: 93 VVLPITTFVVSLFVYQRLAGDRELTVMQAAGLSQFALARAGLGCALMATIMGFLLNLWIV 152 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +Q + + L+E +F ++ D + + I + + TL GI + D R Sbjct: 153 PTSYHAFRQYEFDIRNKMAAFMLQEGVFTKVSDAMTVYIRSRSHDGTLHGIMVEDDRQPG 212 Query: 183 THKIYYAQSGS--IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 A GS I D +IL DG + ++++ FK ++ SA+ Sbjct: 213 NQATILANHGSMMIVNDTPRVILYDGSRQVIDHKTGRLNMLVFKQDSMDLSSAHQEDARF 272 Query: 241 K-ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + A + +L LL+P+P + R ++ E +RLT L F ++ +VA + A Sbjct: 273 RDAAEMSLGELLHPDPQQVSERD--TGKFKVEGWRRLTSPLTCFSFAMVGLVAVLRGAFS 330 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF-----LFCISSIFL 351 R P+ L++ G+ + + +N IP++ L L C +F+ Sbjct: 331 RYGNIKRPLAAVLTVV-GLLAINLLLQNLASRNMALIPLIPLVALLPGLICAGILFI 386 >gi|163735795|ref|ZP_02143224.1| hypothetical protein RLO149_00570 [Roseobacter litoralis Och 149] gi|161390881|gb|EDQ15221.1| hypothetical protein RLO149_00570 [Roseobacter litoralis Och 149] Length = 375 Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats. Identities = 67/358 (18%), Positives = 140/358 (39%), Gaps = 5/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L + F L +V I W+ + + + + S +S + L+ + +P + Sbjct: 1 MVRLDRYMLSQLLVLFGFFALVLVAILWINRGVSLFDQLISDGQSALVFLEFTALGLPKL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P V MN +EL ++ TG+ + L +PVL +++ + + ++ Sbjct: 61 ITTVLPIATFAAAVYVTNRMNNESELTVLQATGSGPVRLARPVLVFGVIVFLMASVLHHV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + T L E F + + + + + L+ +F+ D R Sbjct: 121 LMPLAQQQLGHRQNEIAQNATSRLLTEGRFLHPSEGVTFYTQQIDDDGVLRDVFLSDRRH 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 + IY A + D DR ++I+ DG R + + ++ F+ ++ + N Sbjct: 181 VEEGVIYTAAHAYLIRDEDRTSLIMVDGLAQRLTTATDRLATANFRDFSFDISALVQNDV 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + LL P + T FH R+ LF ++ LI Sbjct: 241 SQRLDPDRMTTFQLLTPWDQLSRETGRSIGTISQSFHARIADPLFCIVAALIGFSTLMIG 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R + + + + S + + ++P P+LYL F + + + M+ Sbjct: 301 GFSRFG-VWREVAFAFVLLVAIDGVRSTLQSPVRRDPELWPLLYLPTFISALLVIAML 357 >gi|254488881|ref|ZP_05102086.1| permease YjgP/YjgQ family protein [Roseobacter sp. GAI101] gi|214045750|gb|EEB86388.1| permease YjgP/YjgQ family protein [Roseobacter sp. GAI101] Length = 376 Score = 273 bits (698), Expect = 4e-71, Method: Composition-based stats. Identities = 68/368 (18%), Positives = 139/368 (37%), Gaps = 9/368 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y+L F L +V I W+ + + + + ++ + L+ + +P + Sbjct: 1 MSKFDRYMLSQFLTLFSFFALVLVAIFWINRAVILFDRLIGDGQTALVFLEFTVLGLPRL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P V+ M +EL ++ TGT L +PV I +++ + + ++ Sbjct: 61 ITTVLPIATFAGAAYVINRMTSESELTVLQATGTGPWRLARPVFAYGICVALMMSVLTHV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P ++ + Q A+ +T L E F + + L+ +F+ D R+ Sbjct: 121 LVPMTKAELNQREAEISQNVTARLLTEGTFLHPTSKVTFYTRLIGNDGVLRDVFLSDRRN 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 IY A + + + +I+ DG R K ++ KF+ ++ + +NS+ Sbjct: 181 PDEGVIYTAAEAYLVRNGNGTTLIMVDGLAQRLQVEGKQLATAKFRDFSFDISALVSNST 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + LL + + E + R LF +I +I Sbjct: 241 DESQSIDSMVTFDLLKNWDDLAAKTGQTHGDIAEEVNARFADPLFCIIAAMIGYATLIMG 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI-- 354 R I I+ + + S ++ + Q+ P+LY+ + + L MI Sbjct: 301 GFSR-FGVWREIVIAFGLLIAIDGFSSTLVETVRQDASRWPVLYVPSLVGAMLVLAMIWQ 359 Query: 355 --KKKYTK 360 +TK Sbjct: 360 TAHPGWTK 367 >gi|329114150|ref|ZP_08242912.1| Hypothetical protein APO_0930 [Acetobacter pomorum DM001] gi|326696226|gb|EGE47905.1| Hypothetical protein APO_0930 [Acetobacter pomorum DM001] Length = 401 Score = 272 bits (697), Expect = 4e-71, Method: Composition-based stats. Identities = 79/357 (22%), Positives = 156/357 (43%), Gaps = 11/357 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + + Y+ + + L + + + W++Q L+ ++LV SL + ++++ LIP+ + Sbjct: 33 TLDRYVFHQLLVALLATTGGLAALIWLMQSLRFVSLVVDRGLSLRVFIELTSLLIPSFVA 92 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + + V + + EL ++ G S+ L K L A++ +I F+ I Sbjct: 93 VVLPITTFVVSLFVYQRLAGDRELTVMQAAGLSQFALAKAGLGCALMATIMGFLLNLWIV 152 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +Q + + L+E +F ++ D + + I + + TL GI + D R Sbjct: 153 PTSYHAFRQYEFDIRNKMAAFMLQEGVFTKVSDAMTVYIRSRSHDGTLHGIMVEDDRQPG 212 Query: 183 THKIYYAQSGS--IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 A GS I D +IL DG + ++++ FK ++ SA+ Sbjct: 213 NQATILANHGSMMIVNDTPRVILYDGSRQVIDHKTGRLNMLVFKQDSMDLSSAHQEDARF 272 Query: 241 K-ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + A + +L LL+P+P + R ++ E +RLT L F ++ +VA + A Sbjct: 273 RDAAEMSLGELLHPDPQQVSVRD--TGKFKVEGWRRLTSPLTCFSFAMVGLVAVLRGAFS 330 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF-----LFCISSIFL 351 R P+ L++ G+ + + +N IP++ L L C +F+ Sbjct: 331 RYGNIKRPLAAVLTVV-GLLAINLLLQNLASRNMALIPLIPLVALLPGLICAGILFI 386 >gi|299135068|ref|ZP_07028259.1| permease YjgP/YjgQ family protein [Afipia sp. 1NLS2] gi|298590045|gb|EFI50249.1| permease YjgP/YjgQ family protein [Afipia sp. 1NLS2] Length = 381 Score = 272 bits (695), Expect = 8e-71, Method: Composition-based stats. Identities = 77/354 (21%), Positives = 163/354 (46%), Gaps = 7/354 (1%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 ++R SFL+ + + + WV Q L+ I+L+++ +++ + L I+G IP + ++ P Sbjct: 1 MVRLTLLSFLIVLVSLTGVIWVTQALRGIDLMTAQGQTVLVFLGITGLAIPVLALIIAPL 60 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 + T+ L ++ ++E+++++ G S ++P + ++++ + + P+C Sbjct: 61 AMLLAVTHTLNRLSADSEVIVMNAAGLSPWRFLRPFMVSTVIVACLISFLAIFLAPECLR 120 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 +++ + + + L+ F RL D L +++ + P L G+FI D R+ Sbjct: 121 ALRRWHTEIGADVLANVLQPGQFIRL-DKLVLRVQERRPGGVLVGVFIDDQRNPAERINI 179 Query: 188 YAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTE--SANSSTIVLKAN 243 AQ+G + + ++L+DG + R KD I+ FKSY S T A Sbjct: 180 TAQNGVVQKTDKGSFLVLSDGNLQRFQADKKDPLIVAFKSYAFDMSQFSQAPQTYNYNAR 239 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 ++ + L++P P + L +R+E H RL L+P +F +++ RQ + Sbjct: 240 ERFIGELISP-PKDDAVAQRSLGQFRAELHDRLLAGLYPFVFVILAFAFLGPPRTTRQGR 298 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + L + G++ + + P I + Y L ++ + + MI K Sbjct: 299 NFAVSALVLLVLVVRIGGYACSTIGVSR-PGAIVVQYAMLMIVAGVSIWMILKG 351 >gi|312113656|ref|YP_004011252.1| permease YjgP/YjgQ family protein [Rhodomicrobium vannielii ATCC 17100] gi|311218785|gb|ADP70153.1| permease YjgP/YjgQ family protein [Rhodomicrobium vannielii ATCC 17100] Length = 387 Score = 271 bits (694), Expect = 9e-71, Method: Composition-based stats. Identities = 72/357 (20%), Positives = 164/357 (45%), Gaps = 6/357 (1%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 YI R + +M + + I W+ +L+ I L+++ ++ + L+I+ IP+++ Sbjct: 2 LISRYIFRQTASALIMILVSLTLIVWLTSLLREIKLLTAQGQTFLLFLQITALAIPSLIV 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 V P F + + L ++ ++EL+++ G+S L P LFLA+++S+ + + + Sbjct: 62 TVAPVAFLIAALHSLNRLSGDSELIVLSAAGSSVWRLFSPYLFLAVVVSMCVLTANLFVL 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + ++ + + ++ F L+ L + N L G+ + D RD + Sbjct: 122 PNAARLLGDTVSQVRADVLSQVIQPGEFSDLEPGLTFHMRAKGDNGELLGVVVRDERDPK 181 Query: 183 THKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT--ESANSSTI 238 A+ G I D R +++L+DG++ R+ ++ F SY SA Sbjct: 182 AVTTVIAEQGQILQDGGRASMMLHDGQIIRQQAEKTAAQVVVFTSYAFDIGDFSAKKGPR 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 K ++++ LL P+ +P Y ++RSE H+R + L+P+ F +I+++ + Sbjct: 242 ERKPRERDIGELLFPDKESPAYT-NTKGSFRSEIHERFSGALYPIAFAIIAVLYLGRPKT 300 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 R + +F + ++ + ++ + + + + ++Y + L+M++ Sbjct: 301 TR-EGRTGNLFTAFTLGAAIRIAGIAGVNIVGKKAWALGLIYGIPVAVIVAGLVMLR 356 >gi|23016381|ref|ZP_00056138.1| COG0795: Predicted permeases [Magnetospirillum magnetotacticum MS-1] Length = 372 Score = 271 bits (694), Expect = 1e-70, Method: Composition-based stats. Identities = 65/360 (18%), Positives = 150/360 (41%), Gaps = 7/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y++R + + + + W+ Q L+ + ++ + S+ LK++ L+P Sbjct: 1 MSGITRYMMRQMLVGMIFVSAALACVLWLTQSLRFVEMIVNKGLSIGAFLKLTILLMPGF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + + EL+++ G S ++L +P + L + +S ++ Sbjct: 61 LVVIIPISLFAVVLFTYNRLIADRELIVLRAAGLSHLSLARPAIILGLAVSAVGYLLSCW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + ++ + + L+E +F + + L I + PN L G+ + D R Sbjct: 121 IIPHTVRSFHEMQWTIRNDIGNVLLQEGMFNKFGEGLTIYVRSRTPNGELTGLLVHDKRH 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYT--LQTESANSS 236 Q A+ G++ Q +++ +G +P + +S++ F +YT T + N Sbjct: 181 PQRAVTLMAERGALVYTEQGPRVLMINGNRQEVTPGTGKLSLLYFDNYTVDFNTATGNKP 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 A +++ LL+ + + L ++SE H RL L+ + F L++ Sbjct: 241 DRFRDARERSTLELLSMD--DSMENKGELRRFKSELHSRLASPLYNLGFPLLAAAVLLTS 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R+ + + + + ++ V + N ++P++YL + L ++ + Sbjct: 299 GFDRRGQTVQVMVSA-ALMVAVQALALGASNLSSGNLAFVPLIYLNATLPIAFGLWVLAR 357 >gi|144897578|emb|CAM74442.1| conserved hypothetical protein, membrane [Magnetospirillum gryphiswaldense MSR-1] Length = 373 Score = 270 bits (690), Expect = 3e-70, Method: Composition-based stats. Identities = 68/358 (18%), Positives = 144/358 (40%), Gaps = 7/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y LR + L + + W+ Q L+ I ++ + S+ LK++G L+P+ Sbjct: 1 MTGITRYFLRQLAVGMLFVSAALTCVLWLTQSLRLIEMIVNQGISVTTFLKLTGMLMPSF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P +N + EL+++ G S L KP L LA + +I ++ Sbjct: 61 LVVIIPIALFAVILFTYNKLNTDRELVVLRAAGLSNWALAKPALILAGIATIMGYVLSVW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P+ +++ + ++ L+E F + + I + L G+ + D R Sbjct: 121 IIPQTVQNFREVQWSIRNDISNLLLQEGTFNKFGKGVTIYVRTRTSEGELLGLLVHDKRS 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS-- 236 A+ G++ I++ +G + + +S++ F SYT+ + Sbjct: 181 PTKPVTLMAEKGALVFTETGPRILMVNGNRQQLPDGTGQLSVLNFDSYTVDLSMSGGDNG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + A + +++ LLN + + E H+RLT L+ + + LI++ Sbjct: 241 SRFRDARELSMAELLNADEAQMGVTD--YRRAKGELHQRLTSPLYSLGYTLIALATLLTA 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R+ + + I ++ + GV + + P ++P LY+ + + Sbjct: 299 GFDRRGQTV-TILTAIGLMVGVQAAVLGLANLSASKPIFLPFLYVLAVLPLVLGPWWL 355 >gi|296116656|ref|ZP_06835266.1| permease YjgP/YjgQ family protein [Gluconacetobacter hansenii ATCC 23769] gi|295976868|gb|EFG83636.1| permease YjgP/YjgQ family protein [Gluconacetobacter hansenii ATCC 23769] Length = 386 Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 64/357 (17%), Positives = 155/357 (43%), Gaps = 6/357 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + Y+LR + + + + + + W+ Q L ++LV SL + ++++ LIP+ Sbjct: 15 LSILDRYVLRQLLLALVATTGALALLIWLTQSLHFVSLVVGRGLSLRVFVQLTSLLIPSF 74 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + + + + EL ++ G S + +P L A++ + + Sbjct: 75 VAVILPITTFVVVQFIYQRLGSDRELTVMQAAGLSPFMMARPALLCALVSVLACYALNLW 134 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +Q + + + +++ +F ++ D++ + I +P+ L GI + D R Sbjct: 135 VVPTAYHGFRQYEYQIRNKMAAFLIQDGVFTQVSDNMTVYIRARDPSGMLHGIMVEDDRQ 194 Query: 181 TQTHKIYYAQSGS--IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS-T 237 A+ GS I D+ I+L +G + ++++ F+ T+ + + + T Sbjct: 195 PDAQATILAEEGSFVITNDQPRIVLFNGSRQEIDRKTGRLNMLSFERNTIDLSAPHGTQT 254 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 AN+ ++ LL+PN + P + E +RLT L F +I +++A Sbjct: 255 RQPDANELPITALLHPNLRQ--FSPRDEKKMIIEAWRRLTSPLCAFSFAMIGLLSALGGG 312 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R + P+ +L++ + + +N +P++++ + + M+ Sbjct: 313 FSRHGNIVRPVAATLAVVAVQAL-TLLVQNLASRNLALMPLMWVSAVLPGMVCMAML 368 >gi|83942394|ref|ZP_00954855.1| membrane protein, putative [Sulfitobacter sp. EE-36] gi|83846487|gb|EAP84363.1| membrane protein, putative [Sulfitobacter sp. EE-36] Length = 376 Score = 268 bits (686), Expect = 8e-70, Method: Composition-based stats. Identities = 63/368 (17%), Positives = 132/368 (35%), Gaps = 9/368 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y+L F L +V I W+ + + + + ++ + L+ + +P + Sbjct: 1 MAKFDRYMLSQFLILFSFFALILVAIFWINRAVVLFDRLIGDGQTALVFLEFTVLGLPKL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + V+ M +EL ++ TGTS L +PV + ++I + + ++ Sbjct: 61 ITTVLPIATFAGSVYVINRMTSESELTVLQATGTSPWRLARPVFVYGLCVAIMMSVLTHL 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A+ +T L E F + + + L+ +F+ D R+ Sbjct: 121 LLPLSNGQLSEREAEISQNVTARLLTEGTFLHPTSKVTFYTRVIDADGVLRDVFLSDRRN 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 IY A + + D +I+ DG R K +S KF+ ++ + ++ Sbjct: 181 PDEGVIYTASEAYLIRNGDGTTLIMVDGMAQRLEMAGKRLSTAKFRDFSFDISALVSSDK 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + + E R F +I +I Sbjct: 241 PRTQSIDAMTTAEMFAQWDQLETITKSSAGEIAEELTARFASAAFCMIAAMIGYATLVLG 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI-- 354 R I I+ + + ++ + + P+L+L + I + MI Sbjct: 301 GFSRFG-VWREIVIAFGLLIAIDGLRGTLVETVRDDASRWPLLFLPSLIGAVIVIGMIWQ 359 Query: 355 --KKKYTK 360 +TK Sbjct: 360 TAHPGWTK 367 >gi|158425949|ref|YP_001527241.1| putative permease precursor [Azorhizobium caulinodans ORS 571] gi|158332838|dbj|BAF90323.1| putative permease precursor [Azorhizobium caulinodans ORS 571] Length = 387 Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats. Identities = 73/361 (20%), Positives = 166/361 (45%), Gaps = 10/361 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI +F+ L + + W Q L++++LV+S +++ L I+ +PT+ Sbjct: 1 MGRLDRYIFSTSAVAFVGVTLVLTGMIWATQALRQLDLVTSQGQTILAFLAITSLTLPTL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + T+ L +N ++E++++ G S +++ ++ LA+L S+F Sbjct: 61 IMVIAPAALFIATSYTLLKLNGDSEIVVMAAAGMSPWRVLRSLMLLAVLASVFCSALSIH 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + + ++ + + + F L L + N + G+FI D+R+ Sbjct: 121 IVPASLRSFRDQVSRVRADVVSFVAQPGRFVNLAPGLVFHVRDRAKNGVMSGVFINDARE 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISK-DISIMKFKSYTLQTES----A 233 + Y A G I ++L +G +HR+ P + + S+++F+ Y + Sbjct: 181 KEV-STYVADRGQIVEADNGIFLVLENGSIHRRVPGAASNGSVVEFQRYAFDLSALTPGG 239 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + S ++ N+++ +++ NP ++P Y +R E+HKRL+ L+P+ F I+ A Sbjct: 240 SQSGADIRPNERSFAYISNPPKDDP-YMIVQPGRFREEYHKRLSAGLYPLAFFAIAAAAM 298 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + R+ + + + + I + + ++ + +P +YL + L+ Sbjct: 299 ARPRTTRESRGLA-LAAIVPIMTALQIANFAVAGQLRTAAWAVPAIYLIPLLTIIVSALV 357 Query: 354 I 354 + Sbjct: 358 L 358 >gi|83953614|ref|ZP_00962335.1| membrane protein, putative [Sulfitobacter sp. NAS-14.1] gi|83841559|gb|EAP80728.1| membrane protein, putative [Sulfitobacter sp. NAS-14.1] Length = 376 Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats. Identities = 64/368 (17%), Positives = 134/368 (36%), Gaps = 9/368 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y+L F L +V I W+ + + + + ++ + L+ + +P + Sbjct: 1 MAKFDRYMLSQFLILFSFFALILVAIFWINRAVVLFDRLIGDGQTALVFLEFTVLGLPKL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + V+ M +EL ++ TGTS L +PV + ++I + + ++ Sbjct: 61 ITTVLPIATFAGSVYVINRMTSESELTVLQATGTSPWRLARPVFVYGLCVAIMMSVLTHL 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A+ +T L E F + + + L+ +F+ D R+ Sbjct: 121 LLPLSNGQLSEREAEISQNVTARLLTEGTFLHPTSKVTFYTRVIDADGVLRDVFLSDRRN 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 IY A + + D +I+ DG R K +S KF+ ++ S ++ Sbjct: 181 PDESVIYTASEAYLIRNGDGTTLIMVDGMAQRLEMAGKRLSTAKFRDFSFDISSLVSSDK 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + + E +R + F +I +I Sbjct: 241 PRTQSIDAMTTAEMFAQWDQLETITKSSAGDIAEELAQRFSSAAFCMIAAMIGYATLVLG 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI-- 354 R I I+ + + ++ + + P+L+L + I + MI Sbjct: 301 GFSR-FGVWREIVIAFGLLIALDGLRGTLVDTVRDDASRWPLLFLPSLIGAVIVIGMIWQ 359 Query: 355 --KKKYTK 360 +TK Sbjct: 360 TAHPGWTK 367 >gi|86138693|ref|ZP_01057266.1| membrane protein, putative [Roseobacter sp. MED193] gi|85824753|gb|EAQ44955.1| membrane protein, putative [Roseobacter sp. MED193] Length = 387 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 65/358 (18%), Positives = 128/358 (35%), Gaps = 5/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y+L F L +V + WV + + + + ++ + L+ + +P + Sbjct: 1 MSRFDRYVLSQYLLFFSFFALILVAVFWVNRAVVLFDRLIGDGQTAIVFLEFTALALPNL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + MV P V + +EL ++ TGTS + +P L ++ ++ + + + Sbjct: 61 IRMVLPVAVFASAVWVTNRLQSESELTVLRATGTSPWQMARPALAFGVITALMMSVLTHF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P S + + +T L E F + I + + N TL +F+ D RD Sbjct: 121 LLPSSISQLALREQEVSRNVTAKLLTEGHFLHPVKGVTFYIRQIDSNGTLNDVFLSDRRD 180 Query: 181 TQTHKIYYAQSGSIDLDR--QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA--NSS 236 Y + D +I+ +G R ++ +S F ++ S S+ Sbjct: 181 PNQTMTYTGARAFLVRDGENTHLIMVNGMAQRLEHRTQQLSTTNFSDFSYDISSLANQST 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + + LL N EFH R + L V LI Sbjct: 241 AAIRNIREISSWELLQDRENISLTEGYSRGALAEEFHLRFARALICVAVALIGFSTLMLG 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + R ++ + V + + NP ++YL F +I + + Sbjct: 301 SYSRLG-VWRQALVAFLLLILVEGLRGVVSEPVRSNPDLWLLIYLPAFIGLAIAVGFL 357 >gi|288962055|ref|YP_003452365.1| predicted permease [Azospirillum sp. B510] gi|288914335|dbj|BAI75821.1| predicted permease [Azospirillum sp. B510] Length = 385 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 60/361 (16%), Positives = 137/361 (37%), Gaps = 7/361 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+ R + + L S + W+ Q L+ I +V S+ + + L + +PT Sbjct: 1 MNRLQRYLFRNLLIATLYSTAGLTLTIWLSQSLRLIEIVVSAGAPMGMFLWLLLLTVPTF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L +V P M ++EL+++ G +L P L LA+ + + + Sbjct: 61 LGVVLPLALVGAILFTYNKMTTDSELVVMRAAGVGPFSLSTPALVLAVAVMAIVLVLNVW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + ++ + + +L E +F + D + + + + L + I D R Sbjct: 121 ITPAAHRELVRMEYAVRSDYSQLFLREGVFNEVGDRFSVFLRDRDSDGNLHKVLIHDGRQ 180 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE--SANSS 236 + D ++ DG + +S + F+ Y + + + ++ Sbjct: 181 PDKPVTIMGDRALMQTGADGTRFVVYDGNRQELDRKTNRLSQLFFERYAVDLKAVAPQAA 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 A +++ L++ N P + +E H R + L + F L+++ A Sbjct: 241 DRWPDARERSTEDLMSGNV--PAQDDRMRRGLIAELHHRFSSPLLALTFALVALSALLSG 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R+ + + I++ + G+ G + + ++P++Y L ++ + Sbjct: 299 EFNRRGQSSR-VTIAVLLVMGLQAGALGLTSLAGKATVFVPLMYAMPVVALLPALWVMSR 357 Query: 357 K 357 Sbjct: 358 G 358 >gi|260576761|ref|ZP_05844746.1| permease YjgP/YjgQ family protein [Rhodobacter sp. SW2] gi|259021013|gb|EEW24324.1| permease YjgP/YjgQ family protein [Rhodobacter sp. SW2] Length = 376 Score = 266 bits (680), Expect = 4e-69, Method: Composition-based stats. Identities = 73/367 (19%), Positives = 160/367 (43%), Gaps = 7/367 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y+L + F L +V + W+ + + + + +S + L+ S +P+V Sbjct: 1 MSRFDRYLLSQLLALFGFFSLVLVAVYWINRAVLLFDKLIGDGQSALVFLEFSLLTLPSV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V PF + T + + R++EL+++ TG S + L +PV ++++ + + ++ Sbjct: 61 IMLVLPFSAFVATVYGINRLTRDSELVVMQATGFSPLRLARPVAIFGLIVAAMMAVLLHV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ R+T+ Q + + L +L + F + + I + +P L+ +F+ D+R Sbjct: 121 LVPESRATLAQRTLEVSENLAARFLMDGQFMHPAKGITLYIREISPKGELRDVFLADTRS 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 +H Y A + +++ DG V + +S+ +F +T + + Sbjct: 181 PTSHATYTASRALLVKGDSGPKLVMLDGMVQNLNNKEGRMSVTRFADFTYDLATLIAGPK 240 Query: 239 VLK--ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 VLK A+ + LL P+ E E + H RL Q + + LI A Sbjct: 241 VLKRNASALSTYDLLWPSAEILQETAETPEALWFQAHNRLAQPILGLAAALIGFSALLLG 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF--LLMI 354 A R I +++++ V + ++ + P + P+ Y ++ LL + Sbjct: 301 AFSR-FGLWRQIAVAVALMITVQGIATTMLSLGLKQPEFWPLAYAAPLAGLAMAAGLLWL 359 Query: 355 KKKYTKI 361 ++ ++ Sbjct: 360 AQRPQRL 366 >gi|254477380|ref|ZP_05090766.1| permease YjgP/YjgQ [Ruegeria sp. R11] gi|214031623|gb|EEB72458.1| permease YjgP/YjgQ [Ruegeria sp. R11] Length = 388 Score = 266 bits (680), Expect = 4e-69, Method: Composition-based stats. Identities = 68/358 (18%), Positives = 130/358 (36%), Gaps = 5/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M ++ Y+L F L +V + W+ + + + + +S + + + +P + Sbjct: 1 MSRYDRYVLSQYLLFFGFFALILVAVFWINRAVVLFDRLIGDGQSALVFFEFTALSLPNL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + MV P + V +N +EL ++ TGTS + KP L I+ +I + I + Sbjct: 61 IRMVLPVAAFASSVWVTNRLNSESELTVLRATGTSPWQMAKPALAFGIITAIMMSILTHF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +T++Q + +T L E F + I + +P+ TL +F+ D R+ Sbjct: 121 LLPTSIATLEQRETEISRNVTAKLLSEGDFLHPTRGVTFYIGRIDPDGTLNDVFLSDRRN 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA--NSS 236 Y + D DR +++ DG R ++ +S F ++ S + Sbjct: 181 PDQVVTYTGGKAYLVRDEDRTHLVMVDGMSQRIDMQTRRLSSTIFSDFSYDISSLANKAE 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 LL P E H R + L V LI A Sbjct: 241 EKTRNIRAIPSLELLQDRARLIAEGPYSAGALAEELHLRFARALVCVAVALIGFSALMVG 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R ++ + V + + +N P++YL + L+ + Sbjct: 301 GFSRFG-VWRQALVAFVLLIFVEGLRGVVSEPVLENADMWPLIYLPTAVGLAAALIFL 357 >gi|197105168|ref|YP_002130545.1| hypothetical protein PHZ_c1705 [Phenylobacterium zucineum HLK1] gi|196478588|gb|ACG78116.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1] Length = 378 Score = 266 bits (679), Expect = 6e-69, Method: Composition-based stats. Identities = 64/363 (17%), Positives = 143/363 (39%), Gaps = 7/363 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + Y+LR + +++ L + +A + Q L ++L+ + +S + LK++ +P + Sbjct: 1 MRLIDRYLLRQLLGPVILATLALTGVALLSQTLSGLDLIVNQRQSALVFLKVTLLAMPQL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + MV P + L ++ E+++ G SR +I P + LA ++ + Sbjct: 61 INMVLPIAVFVAALVALNRLHTEQEIVVCFAGGMSRWRVISPAIRLACTVAFLALLMNLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 ++P +++ + + L + + E F L + + L+ +FI RD Sbjct: 121 VQPAAYREMRRELFQVRTDLASTLVREGEFTEPAPGLTVYAQGVDGAGNLENLFIHQMRD 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST- 237 + Y A+ G + R +++ +G S + ++ + F Y + SS Sbjct: 181 DGSATTYTAEQGRVGRSQGRPVLVMRNGSNQEFS-STGVLNYLTFDEYIFDLSALTSSDE 239 Query: 238 -IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + K +D+ L P+ R L+ +E H R++ L+ + F +++ A Sbjct: 240 LVHYKPSDRYPHELFFPDLQQDWERRNRLD-LLAEGHARISSPLYNIAFMAMALSAIIGG 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R I + + V + E + YL +++ I + Sbjct: 299 GFSRLG-YGRRIAAMGAAAAIVRILGFQVQAASEDAAWLNVFQYLIPLAATALAFRSIFR 357 Query: 357 KYT 359 + Sbjct: 358 QRV 360 >gi|304392005|ref|ZP_07373947.1| permease YjgP/YjgQ family protein [Ahrensia sp. R2A130] gi|303296234|gb|EFL90592.1| permease YjgP/YjgQ family protein [Ahrensia sp. R2A130] Length = 402 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 70/359 (19%), Positives = 158/359 (44%), Gaps = 7/359 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + E Y+ + + +V + WV++ +Q ++++ S + + L I+ +P++ Sbjct: 3 LSLLERYVFKKALVMVATALAGLVGVIWVVRAVQEVDVIMSKGQGIMTYLTITTLGVPSL 62 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + ++++N +E++++ +G SR +L +P L+LA L++I ++ Sbjct: 63 IAAVAPLALMIGMVRTISALNDESEMVVMHASGASRWSLARPFLWLAGLMAIMIYFLSLY 122 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + +++ + L +++ F +L L I+ P L+G+FI D+RD Sbjct: 123 GGPHSLTKMRETVNTMRADLISVVVKDGEFQQLGGGLMFHIATRLPGGELKGVFITDTRD 182 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 H Y A SG+I + ++L G+V R + + + S + F SY + + T Sbjct: 183 ENEHLTYLADSGTISKIGEDAYLVLRQGQVQRTTVKTNNSSFIDFDSYAFNLSTFSGGTG 242 Query: 239 VLKANDQ---NLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 K+ + S L +P+P + ++ +R EFH R T L+ + ++ +V Sbjct: 243 DGKSRSRGELRTSELFSPDPADEMFK-RAPHRFRVEFHTRFTSGLYAFMVAIVILVCMGN 301 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RQ + I ++ + + + + ++ P ++ ++ Sbjct: 302 PQSHRQGLTV-LITSTVVLVILLRGAGILVENNLKATPLLWVAVWGIPLLAIGNSFRLL 359 >gi|114328863|ref|YP_746020.1| hypothetical protein GbCGDNIH1_2199 [Granulibacter bethesdensis CGDNIH1] gi|114317037|gb|ABI63097.1| hypothetical membrane spanning protein [Granulibacter bethesdensis CGDNIH1] Length = 400 Score = 262 bits (669), Expect = 7e-68, Method: Composition-based stats. Identities = 76/358 (21%), Positives = 160/358 (44%), Gaps = 7/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + + Y++R + + + +V + W+ Q L+ I LV + S+ + LK++G LIP+ Sbjct: 18 LTTLDRYVMRQLLVALVACTCGLVALIWLTQSLRFIELVVNRGLSVFVFLKLTGLLIPSF 77 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + V + + EL ++ G S + +P L +A+L + F+ Sbjct: 78 VAVIIPITTYVVVQFVYQRLAGDRELTVMRAAGLSSWVMARPALLVALLTMLLSFVLNLW 137 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P S ++ + + + L++ +F + DD+ + I K + + TL GI I D+R Sbjct: 138 IVPAAFSAFREYQWEIRNKMAAFLLQDGVFTPVSDDMIVYIRKRDADGTLHGILIDDARK 197 Query: 181 TQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE-SANSS 236 +H AQ G ++ ++L G + ++I+ F T+ E S Sbjct: 198 ADSHATIIAQRGRMEQGSNGAPQVVLESGSRQELDRHTGRLNILTFNENTISLEQSGKDE 257 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 AN+ +L+ LL+P+P+ R + R E H+RL+ L + F ++++V+ Sbjct: 258 QRSRDANEMSLTELLHPDPSQVMARD--IPKLRVEAHRRLSGPLNVLSFAVVALVSVLNG 315 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 A R + P + + + + + + P IP++++ ++ Sbjct: 316 AFRRHGGLLRPGVAA-LVVVALLAVGLAVANAAAKLPQLIPLIWIAAVAPGMAGAWIM 372 >gi|126739399|ref|ZP_01755092.1| hypothetical protein RSK20926_20820 [Roseobacter sp. SK209-2-6] gi|126719499|gb|EBA16208.1| hypothetical protein RSK20926_20820 [Roseobacter sp. SK209-2-6] Length = 376 Score = 262 bits (669), Expect = 8e-68, Method: Composition-based stats. Identities = 65/367 (17%), Positives = 136/367 (37%), Gaps = 7/367 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M ++ Y+L F L +V + WV + + + + +S + ++ + +P + Sbjct: 1 MSRYDRYVLSQYLLFFGFFALILVAVFWVNRAVVLFDRLIGDGQSALVFVEFTALTLPNL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + MV P + V + +EL ++ TGTS + +P L ++ ++ + ++ Sbjct: 61 IRMVLPVAVFASSVWVTNRLQSESELTVLRATGTSPWQMARPALVFGLVAALMMSALTHV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P S ++ + +T L E F + I K + TL+ +F+ D RD Sbjct: 121 LLPASISQLEIREREVSRNVTARLLTEGNFLHPAKGITFYIRKIESDGTLKDVFLSDRRD 180 Query: 181 TQTHKIYYAQSGSIDLD--RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + Y + D + +I+ +G R + ++ +S F ++ + + Sbjct: 181 PNSSVTYTGSEAFLVRDGEKTHLIMVNGMAQRFTKDTRRLSTTNFSDFSYDISALARKSA 240 Query: 239 VLKANDQNLSFL--LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 N + + L L N E H R + L V LI A Sbjct: 241 DRSRNIRAIPSLEILTAREQITNTDGYSAGALAEELHLRFARALVCVTVALIGFSALMLG 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF--CISSIFLLMI 354 R ++ + V + + ++P P++YL I + L + Sbjct: 301 TFSR-FGVWRQALLAFLLLILVEGLRGVVSEPVLKDPTLWPLIYLPAVTGLIIAAGFLQL 359 Query: 355 KKKYTKI 361 + T+I Sbjct: 360 AARPTRI 366 >gi|126728787|ref|ZP_01744602.1| Predicted permease [Sagittula stellata E-37] gi|126710717|gb|EBA09768.1| Predicted permease [Sagittula stellata E-37] Length = 376 Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats. Identities = 66/358 (18%), Positives = 137/358 (38%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ F+ Y+L + F L +V + WV + + + + + S I+L+ + +P V Sbjct: 1 MQRFDRYVLSQLMVLFGFFALVLVSVYWVNRAVVLFDRLINDGHSARIVLEFTALSLPAV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V P V ++ ++EL ++ TG S L +PVL I++++ + + ++ Sbjct: 61 IALVLPMATFAAAVYVTNRLSGDSELTVVKATGFSPWRLARPVLVFGIMVTLMMSVLTHV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ ++ + +++ L E F + I P TLQ + + D R+ Sbjct: 121 LVPQSLKQLRMREQELSSSVSARLLREGTFLHPSKGITFYIRDITPEGTLQDVLLSDRRE 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + IY A + D + +++ G + +S F +T +++ Sbjct: 181 PEREVIYTADRAYLIRDDEGPKMVMLAGLAQTMNTTDMRLSTTNFSDFTYDLTGLITASP 240 Query: 239 --VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 K + + LL + + E H R L V+ LI A Sbjct: 241 QKRRKLDAIPTTELLLNTDGIAAETGQQIGEVLEEAHMRFQGPLLCVVAALIGYSALMVG 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R I ++ + V S + + +NP P++Y F ++ Sbjct: 301 VFSRFG-VTRQIVFAIFLLVVVKLVESAVTDPVVRNPRLWPLVYA-PSVTGLAFTWIL 356 >gi|304321348|ref|YP_003854991.1| putative permease [Parvularcula bermudensis HTCC2503] gi|303300250|gb|ADM09849.1| putative permease [Parvularcula bermudensis HTCC2503] Length = 426 Score = 260 bits (664), Expect = 3e-67, Method: Composition-based stats. Identities = 68/353 (19%), Positives = 150/353 (42%), Gaps = 6/353 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + YI + + FL+ + W Q+LQR++L+ SL L+++ LIP++ Sbjct: 46 LTLLDRYIFKQVAVPFLLILACTTAVIWFTQMLQRVDLMVEDGGSLLSFLRVTVLLIPSL 105 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ PF L ++EL + G SR+ L +PVL L+IL ++ Sbjct: 106 VGVILPFAVFAAVLYALNLFVTDSELPAMRAAGASRLRLARPVLVLSILAALVSLYINAD 165 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 ++PK ++Q + + S + E +F + + + + P G+FI DS D Sbjct: 166 LQPKTYRQLRQTVEDVRSDIAQSLIREGVFVQPTAQITVFAQEVRPGGQFIGLFINDSSD 225 Query: 181 TQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST- 237 + K Y A+ G + ++L +G V + + + + ++ + + + + Sbjct: 226 PRETKTYTAERGLFQMAETGPKLLLIEGTVQYRDRETGRVDVFRYIETAVDLAAFDRGSG 285 Query: 238 -IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 L ++ +S LLNP+ ++P+ L + YR+ H RL L+ ++++ Sbjct: 286 GRSLDETERTVSQLLNPDLSDPSI-ARLADRYRAAGHARLATPLYCPALAVVALCFLLSP 344 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 + R+ + +++ + + G + + Y+ + + Sbjct: 345 PISRRG-YGQQVLMAIGCALLLRTGGFLLQGLAADLGALNGLQYIVPLAVILL 396 >gi|154253775|ref|YP_001414599.1| permease YjgP/YjgQ family protein [Parvibaculum lavamentivorans DS-1] gi|154157725|gb|ABS64942.1| permease YjgP/YjgQ family protein [Parvibaculum lavamentivorans DS-1] Length = 388 Score = 259 bits (663), Expect = 4e-67, Method: Composition-based stats. Identities = 64/361 (17%), Positives = 153/361 (42%), Gaps = 9/361 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +KS Y+ F+++ + + I W+ Q L+ ++++ + ++L +++ +P+ Sbjct: 2 LKSLSRYLFFQTLGPFVVASVVLSGIIWLTQALRMLDVLITQGQTLLTFFELTVLALPST 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L +V P L + ++E++++ G SR + P+L +A+ S+ + Sbjct: 62 LMIVLPISLFCAVLYSLHKLISDSEIVVMFAAGVSRWVVALPLLAIAMGTSVIILAFSIY 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P +K + + + + + E F L + + + + T G+ + D R Sbjct: 122 IAPAGMRELKSRLVEIRSDVATAMIREGTFSNPATGLTVFVRERAADGTTYGVLVHDGRI 181 Query: 181 TQTHKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKF-----KSYTLQTESA 233 Y A++GS+ + +++ +G + R S + S F +Y L Sbjct: 182 PSAPVTYMAETGSLVRGPNGPLLVMFNGNIQRASRSGTETSAATFLYFDKYTYDLSQYME 241 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + T+ + ++ L+NP ++ Y + + ++ H+RL + +PV+ LI + A Sbjct: 242 DEPTLSYEGRERYFHELVNPASDD-LYGQQNRDKLLADAHERLVEGFYPVMLTLIGLAAL 300 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 R+ + + +++ V + + + N P++Y+ + I L + Sbjct: 301 LPAPFNRRG-YASRMATAAAMALTVRILGFALSNAVGNNLALAPLMYILPIAVCGICLAV 359 Query: 354 I 354 I Sbjct: 360 I 360 >gi|254460553|ref|ZP_05073969.1| permease YjgP/YjgQ family protein [Rhodobacterales bacterium HTCC2083] gi|206677142|gb|EDZ41629.1| permease YjgP/YjgQ family protein [Rhodobacteraceae bacterium HTCC2083] Length = 381 Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats. Identities = 63/365 (17%), Positives = 133/365 (36%), Gaps = 6/365 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + F+ Y+L + F L +V + W+ + + + + + + ++ L+ + +P V Sbjct: 5 LARFDRYVLSQLFVLFGFFSLVLVSVYWINRAVILFDRLIADGQPASVFLEFTALSLPNV 64 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + MV P + V + +EL+++ TG S L +PV+ ++ F+ + Sbjct: 65 IRMVLPMSAFAASVYVTNRLASESELVVMQATGYSPWRLARPVVMFGFIVGTFMMVLTQY 124 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P ++ + +L+ L E F + I + P L+ +F+ D R+ Sbjct: 125 LVPSSLEQLRFRENEITGSLSSQLLREGEFMNPTKGVTFYIREITPEGVLKDVFLSDRRN 184 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 Y + G + + +++ G H + ++ ++ KF ++ S N Sbjct: 185 EGRTTTYSSVDGFLVNEPTGPKLVMVSGVTHTLNEDTRKLTKTKFTDFSYSISSLIDNPG 244 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + N LL + E H R Q + V+ LI Sbjct: 245 SFYKSLNQYQTLELLLATDVVQKRSGQSTGRILEEAHSRFNQPILCVVAALIGFSTLLLG 304 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-FLFCISSIFLLMIK 355 R I L + V S + I N P++Y +F ++F ++ Sbjct: 305 GFSRFGVGRQIIGAILLLVM-VKLVESIVTDPIRANAQLWPLVYAQSVFGFGAVFTMLYL 363 Query: 356 KKYTK 360 + Sbjct: 364 AARPR 368 >gi|209964866|ref|YP_002297781.1| predicted permease YjgP [Rhodospirillum centenum SW] gi|209958332|gb|ACI98968.1| predicted permease YjgP [Rhodospirillum centenum SW] Length = 372 Score = 259 bits (662), Expect = 5e-67, Method: Composition-based stats. Identities = 62/360 (17%), Positives = 140/360 (38%), Gaps = 7/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+LR + + + + W+ Q L+ + +V SL I +++ PT Sbjct: 1 MNQIDRYLLRNLAVATVFVTAGLSAAIWLTQSLRLVEMVVEGGASLGIFFRLALLTFPTF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + ++EL+++ G S + L +P L LA ++++ + Sbjct: 61 LSLILPVGLLAAVLFTYNRLIMDSELVVMRAAGLSPMALARPALILAAVVALLCYTLTLF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + + +L + ++ L E F + L + + + L G+ I D R Sbjct: 121 AGPAAQRELVRLRQAVRSDVSAVLLREGTFNDVGTGLTVYVRERGREGALSGLLIHDLRS 180 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS-- 236 A+ G + D +++ +G + ++F YT+ ++ Sbjct: 181 PGVATTVVAERGRLVEVDDVPHVVVFNGTQIKFHQDDGRTEWLEFARYTVDLQALRKELG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 ++ +++L L+N + + R+E H RL L P+ F + + A Sbjct: 241 PRWIEPRERSLRDLVNLT--DDPLDRQFFGRLRAELHSRLATPLLPLAFTAVGLAALLPG 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R+ + ++ + + I + + +NP P+LY + ++ L + + Sbjct: 299 EFSRRGQGRRIALAAVG-ALVLQSAVLGISNLVGKNPALTPLLYGAVLLPAAAALWYMVR 357 >gi|260432791|ref|ZP_05786762.1| permease YjgP/YjgQ [Silicibacter lacuscaerulensis ITI-1157] gi|260416619|gb|EEX09878.1| permease YjgP/YjgQ [Silicibacter lacuscaerulensis ITI-1157] Length = 379 Score = 258 bits (660), Expect = 8e-67, Method: Composition-based stats. Identities = 64/366 (17%), Positives = 133/366 (36%), Gaps = 6/366 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y LR + F L +V + W+ + + V S +S + L+ + +PT+ Sbjct: 1 MSRFDGYFLRQLLVLFGFFTLVLVGVFWITRSVSLFERVISGGQSAMVFLEFTALTLPTL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P ++R +E+ ++ TG+S L + V+ ++ + + + + Sbjct: 61 IRTVMPMAVFAAAVYATNRLSRESEMTVMLATGSSPWRLSRGVILFGLIAGLMMAVISVV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +++ A+ +T L E F + + I + + + TL +F+ D RD Sbjct: 121 LRPASVEQLERRQAEVAGDVTAQLLNEGEFMHPAPGVTVYIGRIDLDGTLNEVFVSDRRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFK--SYTLQTESANSS 236 Y + S + D +++ DG R +S +F+ SY + + Sbjct: 181 RNNPATYSSTSAYLLSDDTGVHLVMVDGVALRLDREGNTLSSTQFQDASYDVSELTRKGD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 S LL E H+R + V ++ Sbjct: 241 IGRRSIEAVPTSELLRDLDAVAASDGYPRGELVEELHQRFSWIAICVAVAMVGYATLMLG 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF-LFCISSIFLLMIK 355 + R IF + +I + ++ + ++ P+LY L I + ++ Sbjct: 301 SFSR-FGLWPQIFAAFTILVLLEGVRGFVSPIVIKDARLWPVLYGPALLGIVISCVFLVI 359 Query: 356 KKYTKI 361 I Sbjct: 360 AGRPLI 365 >gi|83312813|ref|YP_423077.1| permease [Magnetospirillum magneticum AMB-1] gi|82947654|dbj|BAE52518.1| Predicted permease [Magnetospirillum magneticum AMB-1] Length = 368 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 64/353 (18%), Positives = 148/353 (41%), Gaps = 7/353 (1%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 ++R + + + + W+ Q L+ + ++ + S+ LK++ L+P L ++ P Sbjct: 1 MMRQMLVGMIFVSAALACVLWLTQSLRFVEMIVNKGLSIGAFLKLTILLMPGFLVVIIPI 60 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 + + EL+++ G S + L +P + L + +S ++ I P Sbjct: 61 SLFAVVLFTYNRLIADRELVVLRAAGLSHLALARPAVILGLAVSAVGYMLSCWIIPVTVR 120 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 + ++ + + L+E +F + + L I + PN L G+ + D R Q Sbjct: 121 SFHEMQWTIRNDIGNVLLQEGMFNKFGEGLTIYVRSRTPNGELTGLLVHDKRHAQRPVTL 180 Query: 188 YAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYT--LQTESANSSTIVLKAN 243 A+ G++ Q +++ +G +P + +S++ F +YT T + V A Sbjct: 181 MAERGALVYTEQGPRVLMVNGNRQEVTPGTGKLSLLYFDNYTVDFNTATGAKHDRVRDAR 240 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 +++ LL + + N L ++SE H RLT L+ + F L++ R+ Sbjct: 241 ERSTLELLAIDSSMEN--KGELRRFKSELHSRLTSPLYSLGFPLLAAAVLLTSGFDRRG- 297 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + + ++ V + N ++P++Y+ ++ L ++ + Sbjct: 298 QTAQVITATALMVAVQALALGASNLSSGNLAFVPLIYINAALPIALGLWVLAR 350 >gi|114766153|ref|ZP_01445157.1| Predicted permease [Pelagibaca bermudensis HTCC2601] gi|114541613|gb|EAU44655.1| Predicted permease [Roseovarius sp. HTCC2601] Length = 371 Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats. Identities = 61/356 (17%), Positives = 122/356 (34%), Gaps = 7/356 (1%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 +L + F L +V + WV + + + + S I L+ S +P V+ +V P Sbjct: 1 MLSQLMVVFGFFALVLVMVYWVNASVSLFDELITDGHSARIFLEFSLLSLPGVIALVLPM 60 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 V M+ +E+ ++ G S L +PVL +L+++ + + + + P + Sbjct: 61 AAFGAAVYVTNRMSNESEMTVLQAGGLSPWRLGRPVLVFGVLIALMMSVLTHALVPASVA 120 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 ++ ++ ++ L E F + I + + L+ +++ D R+ Q Y Sbjct: 121 QLRDRESEISESVAARLLHEGTFLHPARGVTFYIREITDDGELRDVYLSDRRNDQRTVTY 180 Query: 188 YAQSGSIDLD--RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSSTIVLKAN 243 A++ + D + + G +S F T + + +A Sbjct: 181 TAETAYVTRDDGGPKLTMRSGLAQEVQTKDLTLSTTNFTDLTYDISGLITSGGSERRRAR 240 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 LL + + E H R L V+ LI A R Sbjct: 241 QIPTLELLTQTEAVAEEVNDSIGEVLEEAHNRFQMPLLCVVAALIGYAALMTGTFSRFGV 300 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC--ISSIFLLMIKKK 357 + + V S I + P + P++YL + LL + Sbjct: 301 TKQIVGAIFLLVL-VKLVESAITEPVRSTPAFWPLVYLPSLVGFALAAVLLWRAAR 355 >gi|254437787|ref|ZP_05051281.1| putative permease, YjgP/YjgQ family [Octadecabacter antarcticus 307] gi|198253233|gb|EDY77547.1| putative permease, YjgP/YjgQ family [Octadecabacter antarcticus 307] Length = 379 Score = 254 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 63/359 (17%), Positives = 136/359 (37%), Gaps = 5/359 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y+L + F L +V I W+ + ++ + + + +S + L+++ +P+V Sbjct: 1 MARFDRYMLSQLLVLFGFFSLILVVIYWINRAVRLFDRLIADGQSAWVFLELTSLSLPSV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V P + V M+ ++EL ++ TG S L +P+++ ++++ + + +I Sbjct: 61 IRIVLPLSAFVAAVYVTNRMSSDSELTVVQATGYSPFRLARPIIYFGLIVAALMSVLTHI 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + ++ +T L F DD+ I + P+ + IFI +S D Sbjct: 121 LVPLSTEQLTSRQSEISQTMTARLLTPGEFLTPSDDVTFYIRELTPSGEMLDIFISESTD 180 Query: 181 TQTHKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 Y A + + +++ DG + + F + + + Sbjct: 181 PTRRTTYTAARAYLVRTENGPQLVMIDGLTQTLDHETNRLLTTGFADFVYDVGALMNDEF 240 Query: 239 VLK--ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + N + LL P+ + + H R+ Q + GL+ A Sbjct: 241 VRRVSVNGLSTLALLRPSAAAIAATNKTGYELKLRGHDRIAQAALGFVAGLVGFSALVVG 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 R I ++ + + S NP P +YL I +++ Sbjct: 301 GFSR-FGLWRNILFAVGLVILLKILESTGTSIARANPALWPFVYLAGIGGVVISAILLH 358 >gi|315500012|ref|YP_004088815.1| permease yjgp/yjgq family protein [Asticcacaulis excentricus CB 48] gi|315418024|gb|ADU14664.1| permease YjgP/YjgQ family protein [Asticcacaulis excentricus CB 48] Length = 384 Score = 253 bits (647), Expect = 3e-65, Method: Composition-based stats. Identities = 73/362 (20%), Positives = 144/362 (39%), Gaps = 8/362 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M++ E YI R + L + + IA + Q L + +++ +SL+ LKI+ +P + Sbjct: 1 MRTIEGYISRQMRTPILGAIAALTAIAILSQSLTQFDVIVERGQSLSTFLKITFLALPQL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + T L M+ + E++ G S + PV+ + +++ + Sbjct: 61 SGLIFPVAIFVGTLVALNRMHNDHEIVAGYANGMSLWRIASPVVRFGVYITLMGLLMTLF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I+P +++ K + + + + E F + I + + + + L+ IFI Sbjct: 121 IQPAASRAMREELFKIKTDVIAAAVREGDFSTTPSGMTIYVQRIDQSGLLRQIFIRTPGP 180 Query: 181 TQTHKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + Y A+ G + Q +IL DG + SP ++ + F Y+ S Sbjct: 181 HGLDRTYLAREGRVITPVKGGQVLILRDGSTQQLSPE-GVLNHLTFAEYSFDISQYVISE 239 Query: 238 --IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + K +D+ L PN + +E H R++ L+ + F L++IV Sbjct: 240 DYLHFKDSDRFPHELFFPNRAMEWENGNWTKLM-AEGHARISGPLYNLGFCLLAIVGVLG 298 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 A RQ +S I+ G+ I P + Y+ + + L +I Sbjct: 299 GAFSRQGYGRRIATVSF-IAAGLRIVGFAIEAGCANTPVLNIMQYVVPVALIWVCLSIIH 357 Query: 356 KK 357 K Sbjct: 358 KN 359 >gi|163792838|ref|ZP_02186814.1| Predicted permease [alpha proteobacterium BAL199] gi|159181484|gb|EDP65996.1| Predicted permease [alpha proteobacterium BAL199] Length = 369 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 61/362 (16%), Positives = 143/362 (39%), Gaps = 7/362 (1%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ I + + + + + W+ Q L+ ++L+ + + + ++ L+PT L Sbjct: 2 RITRYLAGQILTAMVFIVVSMTCVIWLSQSLRFVDLIVNRGLPIPSFVYLTLMLMPTWLS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P T V + + EL+++ G S + L P + +A+ + ++ + Sbjct: 62 IVLPIAAFAATVFVYNKLTNDRELVVLSAAGLSPLRLAGPAMVVAVATMLATYLMTLYLV 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P K+L + + L E F + D L + + L GI + D + + Sbjct: 122 PMSYRGFKELQFQIRHNFDHLVLREGEFRSIGDGLTVYVRAREDTGQLAGIVVHDQSNAK 181 Query: 183 THKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSSTI 238 A+ G++ + +++ +G + + +S++ F YT+ + Sbjct: 182 KTVTLVAERGALITAPEGPRVVMANGSRQERDVETGRVSVLYFDRYTIDLGAMREEVQRT 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + N+ + LL+P P+ + Y +E H+RLT L + I + Sbjct: 242 IRDQNELFIDDLLHPTEQ--ITDPKNFDEYIAEGHQRLTSPLLALSLTAIGVAVLLSGEF 299 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 R+ + I I ++ ++ + + + P +PI++ + + L + ++ Sbjct: 300 SRRGQTIR-IITAVLLAGCAEAMGLGSKYLVVRYPSMVPIMWFAVIVPFLLALASMTQRR 358 Query: 359 TK 360 K Sbjct: 359 LK 360 >gi|254294286|ref|YP_003060309.1| permease YjgP/YjgQ family protein [Hirschia baltica ATCC 49814] gi|254042817|gb|ACT59612.1| permease YjgP/YjgQ family protein [Hirschia baltica ATCC 49814] Length = 385 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 78/357 (21%), Positives = 154/357 (43%), Gaps = 7/357 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y+ + R+ + +V IA + Q L +I+L+ + +S L +S P V Sbjct: 1 MDRFQQYLFGNVLRTMVSIVGGLVLIALLTQGLTQIDLIVENRQSAFTFLYVSMLAAPQV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + L +R++E+++ G SR+ + PVL +A + ++ Sbjct: 61 IGLLLPIALFVAAIATLNRAHRDSEIVVAQAAGMSRLQIASPVLRIAAIAALLHLCINLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 ++P +++ A+ L + ++ F +L + I K L+ + I D+RD Sbjct: 121 VQPASYREMRETLTSARTDLAATLVKPGEFNSPAHNLTVYIGKSLGGGELRTLLISDARD 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 + Y A++G++ AI++ + V + + + F Y + + + + Sbjct: 181 PDANTTYIARTGAVTEVEGVPAILMRNARVQKID-GNGQLWDGTFDQYIYELAAFVDSDT 239 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + VLKA+D+ L LL P+ NN Y + E + +E H RL L + ++++VA Sbjct: 240 SYVLKASDRFLHELLYPDFNN-FYDRDNAEKFYAEGHSRLALPLMNMFMAMLAVVAVLGG 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 R+ + I ++ I + E NP I YL +I M Sbjct: 299 DFSRRGYQTR-ISVATGIGLFAQLLALASVSVGEDNPKLNFIQYLIPILSFTILAFM 354 >gi|84500989|ref|ZP_00999224.1| Predicted permease [Oceanicola batsensis HTCC2597] gi|84391056|gb|EAQ03474.1| Predicted permease [Oceanicola batsensis HTCC2597] Length = 385 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 62/371 (16%), Positives = 135/371 (36%), Gaps = 11/371 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y+L F L +V I W+ Q ++ + + ++ + L+ + +P V Sbjct: 1 MARFDRYLLSQFMVLFGFFSLVLVSIYWINQAVRLFDALIGDGQTAWVFLEFTALTLPNV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V P V ++ +EL+++ +TG S L +PVL+ +++ + + + + Sbjct: 61 IRIVLPMATFAAVVYVTNRLSSESELVVMQSTGFSPWRLARPVLWFGVIVGLIMSVMSHF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P S +++ + LT L E F + I + + + TL+ +F D RD Sbjct: 121 LVPVSISRLQERQDDLRQDLTARLLTEGSFLHPVAGITFYIRQIDADGTLRDVFFSDRRD 180 Query: 181 TQTHKIYYAQSGSI------DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES-- 232 ++ + + A + D +++ DG + + F+ +T Sbjct: 181 ARSPQTFTAARAYLIEGGGDDEGGAKLVMLDGLAQTLRAEDQRLFTTYFEDFTYDIGRLF 240 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + + L E H R Q L + LI Sbjct: 241 GDRGLPHVHIRHLPTLRLFAHPEQVATLTGSSPGQIAEEAHGRFAQALLCLAAALIGFST 300 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI--F 350 R I +++ + V + ++P P++Y+ I Sbjct: 301 LLTGGFSRFG-VWQQIVVAIVLVMIVKSIEGVASDPVRRDPSLWPLIYVAPLSGIGIGCV 359 Query: 351 LLMIKKKYTKI 361 +L I + +++ Sbjct: 360 MLWIASRGSRL 370 >gi|163759136|ref|ZP_02166222.1| hypothetical protein HPDFL43_05210 [Hoeflea phototrophica DFL-43] gi|162283540|gb|EDQ33825.1| hypothetical protein HPDFL43_05210 [Hoeflea phototrophica DFL-43] Length = 385 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 90/362 (24%), Positives = 177/362 (48%), Gaps = 14/362 (3%) Query: 12 IGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAM 71 + S + Q+L R+++++++ ++ + ++ +IP+V+ +V PF + Sbjct: 1 MASLTFWSLTAATLLVMTTQVLIRVDVLTTTGQAFGAFMLLAATIIPSVISVVAPFALLI 60 Query: 72 ETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQ 131 + VL+ MN ++EL++I+ G T+++PV+ L++ LSI + + N +EP + Sbjct: 61 GVSQVLSGMNSDSELVVIEAAGARPATVLRPVMALSVALSIMVLLVANFVEPWSNRKLYD 120 Query: 132 LSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQS 191 + A+AQ L + F +L+D LY+++++ P L GIF+ D+R T IYYA+S Sbjct: 121 VLAQAQSDLFSVAVRSGTFMKLEDGLYVQVNEKLPGGALSGIFLSDTRTDGTEAIYYAKS 180 Query: 192 GSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSSTIVLKANDQNL 247 G I + D ++L DGE+ ++ + ISI+ F SY L + + +Q+ Sbjct: 181 GVIQPEGDTNILLLLDGELQQRDTSNDQISIVTFSSYALDMAAFVPAGQNAARRPKEQST 240 Query: 248 SFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHP 307 +LL P P++ Y + E +R + WL+P+ FGLI+ K R + + Sbjct: 241 GYLLAP-PSDDYYAGNAPYIIKEELVQRFSTWLYPLAFGLIAFAFLGKARSNRHEQFQNG 299 Query: 308 IFISLSISFGVFWGFSYIIHKIEQNPYY------IPILYLFLFCISSIF--LLMIKKKYT 359 ++ I+ G Y + + + +P + + LF ++ L I K + Sbjct: 300 ALVA-GIALGARGFGFYSVEEAGASSAMEVLSYLVPGMLIVLFGALAVTGHTLTIPKAWA 358 Query: 360 KI 361 ++ Sbjct: 359 RL 360 >gi|315122195|ref|YP_004062684.1| permease protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495597|gb|ADR52196.1| permease protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 283 Score = 249 bits (637), Expect = 4e-64, Method: Composition-based stats. Identities = 187/283 (66%), Positives = 224/283 (79%), Gaps = 1/283 (0%) Query: 80 MNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLA 139 MNRN EL IIDNTGTSRITLIKPVLF AILLSIFLFI EN +EPK R+ IK+L A+A L Sbjct: 1 MNRNAELFIIDNTGTSRITLIKPVLFFAILLSIFLFILENTLEPKYRTEIKRLGAQAYLN 60 Query: 140 LTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQ 199 LT S LEENLFF L+++ YIK+SK NPNNT+QGIF +DS D H+IYYA+SG +DL+++ Sbjct: 61 LTLSSLEENLFFNLNNNFYIKVSKRNPNNTMQGIFAIDSSDPIIHRIYYAKSGFVDLEKK 120 Query: 200 AIILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANSSTIVLKANDQNLSFLLNPNPNNP 258 IIL GEVHRKS +SKDISIMKF SY L +S I LKA+DQNLSFLLNP+PNNP Sbjct: 121 IIILQKGEVHRKSSVSKDISIMKFDSYALDMQSLLAKQDITLKAHDQNLSFLLNPDPNNP 180 Query: 259 NYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGV 318 +YR + YRSE HKRLTQWLFP++FGLISI++ +K + +R +K+HP I+L +SF V Sbjct: 181 SYRENFIGKYRSELHKRLTQWLFPIVFGLISILSIEKTSSLRHYRKVHPSLIALLLSFCV 240 Query: 319 FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTKI 361 F GFSYII IEQ+P YIPILYLF F +SSI +L+IKKKY KI Sbjct: 241 FSGFSYIIQGIEQSPSYIPILYLFFFVLSSILVLLIKKKYVKI 283 >gi|254465542|ref|ZP_05078953.1| permease YjgP/YjgQ [Rhodobacterales bacterium Y4I] gi|206686450|gb|EDZ46932.1| permease YjgP/YjgQ [Rhodobacterales bacterium Y4I] Length = 364 Score = 249 bits (637), Expect = 4e-64, Method: Composition-based stats. Identities = 62/357 (17%), Positives = 128/357 (35%), Gaps = 6/357 (1%) Query: 9 LRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFC 68 + F L +V + WV + + + + + +S + L+ + +P ++ MV P Sbjct: 1 MSQYLLFFGFFALILVAVFWVNRAVVLFDTLIGNGQSALVFLEFTALTLPNLIRMVLPIA 60 Query: 69 FAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRST 128 V +N +EL ++ TGTS + +P L I+ ++ + + + P + Sbjct: 61 AFGAAVWVTNRLNSESELTVLRATGTSPWQMARPALAFGIITALMMSALTHYLLPASINQ 120 Query: 129 IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYY 188 +++ ++ +T L E F + + I + +P+ TL +F+ D RD Y Sbjct: 121 LEERESEVSRNITAKLLSEGDFLHPAEGVTFYIRQIDPDGTLNDVFLSDRRDPAVTVTYT 180 Query: 189 AQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTE--SANSSTIVLKAND 244 + D + +I+ +G R ++ +S F ++ + + Sbjct: 181 GTRAFLVRDEGSAHLIMVEGMAQRLDNETQRMSTTFFSDFSYDISALARKAENPARNIRA 240 Query: 245 QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKK 304 L+ E H R + L V LI A R Sbjct: 241 IPSLELMTSTEAVTRTDGYSAGAQAEELHLRFARALVCVAVALIGFSALMLGTFSR-FGV 299 Query: 305 IHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF-LFCISSIFLLMIKKKYTK 360 F++ + V + + NP P++YL L ++ + +I K Sbjct: 300 WRQAFLAFVVLIFVEGLRGVVSEPVLDNPGLWPLIYLPTLLGLAVSLIFLILASRPK 356 >gi|114704779|ref|ZP_01437687.1| hypothetical protein FP2506_07581 [Fulvimarina pelagi HTCC2506] gi|114539564|gb|EAU42684.1| hypothetical protein FP2506_07581 [Fulvimarina pelagi HTCC2506] Length = 398 Score = 249 bits (636), Expect = 5e-64, Method: Composition-based stats. Identities = 86/361 (23%), Positives = 161/361 (44%), Gaps = 7/361 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E YI R S + S + + I W++Q L RI++V +S + +L I+ L+P + Sbjct: 1 MTLLERYIFRRALISSVGSLVSLALIVWIVQALSRIDIVKTSASAAGNILWIALMLLPDL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 V PF + VL +N ++E +I +G S +++P+++L + I + + Sbjct: 61 AAGVVPFAILIGAIQVLNGLNADSERAVIAASGASMRVILRPIIYLGLAGGILVLTVAHG 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P S + +L F R+ DL I + + N + ++ +FI D+RD Sbjct: 121 IGPLASSAFYNGIRSINVDTITLFLRPGRFERVSPDLVISVGESN-GSIIESLFIQDTRD 179 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST- 237 Y+A SI D+ ++L DG++HRK +S+++F++Y + + Sbjct: 180 PNLDLTYFAAEASILDQGDQSVLMLFDGQLHRKPKTGNSVSVIEFQTYAFDLSNLRPADD 239 Query: 238 -IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + ++ + L+ P+P++ Y+ + Y E R T WL+ V F L +IV A + Sbjct: 240 GDWTRTSELSTLTLIAPDPDDEIYQKK-PGRYVEEATDRFTSWLYCVAFALWAIVCAGQP 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 RQ + + L+ + + + + NP +YL L+I + Sbjct: 299 QTNRQASN-AAMTLGLAGAVALKAVAFLALSMVSPNPSMAIFVYLLPIAACVFNALLIMR 357 Query: 357 K 357 Sbjct: 358 G 358 >gi|119383653|ref|YP_914709.1| permease YjgP/YjgQ family protein [Paracoccus denitrificans PD1222] gi|119373420|gb|ABL69013.1| permease YjgP/YjgQ family protein [Paracoccus denitrificans PD1222] Length = 382 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 59/369 (15%), Positives = 141/369 (38%), Gaps = 9/369 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YIL F L +V + W+ + + + S ++ ++L+ + +P V Sbjct: 1 MPRIDRYILSQFMTLFGFFALVLVSVYWINRAVSLFEQLISDGQTALVVLEFTALTLPLV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V P + ++ +EL+ + TG S + +PVL +L+++ + + + Sbjct: 61 ISVVLPIAAFAASAYGTNRLSSESELVAMQATGMSPWRMARPVLVFGVLVALMVALLVHA 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P R + A+ +T +L F + + I + L F+ D+R+ Sbjct: 121 VVPMARGRLADRQAEIAQNVTAQFLRAGAFQYPVRGVTLYIRDIAADGRLVDFFLEDARN 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVH--RKSPISKDISIMKFKS--YTLQTESAN 234 + Y + + + +++ G V R + + +S+ +F Y L T Sbjct: 181 PDSQTTYTSTEALLVRTDEGPRLVMMQGMVQNLRHAGNRQSLSVTRFSELAYDLGTLIDT 240 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + + LL+P+P + +E H+RL + + L+ Sbjct: 241 GESRKRDLRAYSTLRLLDPDPELLAATGATRDRALAEAHERLAKPFQAPVAALLGFGMLL 300 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI--FLL 352 R + ++ V + + +++ N P++Y+ ++I +L Sbjct: 301 LGGFSR-FGVWRQVVWAVVALIVVQFLSTAAENQVAGNASRWPLIYVSPLVGAAICCAVL 359 Query: 353 MIKKKYTKI 361 + + ++ Sbjct: 360 WLAARPRRL 368 >gi|163743163|ref|ZP_02150545.1| hypothetical protein RG210_14720 [Phaeobacter gallaeciensis 2.10] gi|161383580|gb|EDQ07967.1| hypothetical protein RG210_14720 [Phaeobacter gallaeciensis 2.10] Length = 376 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 64/351 (18%), Positives = 129/351 (36%), Gaps = 5/351 (1%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 +L F L +V + W+ + + + + +S + L+ + +P ++ MV P Sbjct: 1 MLSQYLLFFGFFALILVAVFWINRAVVLFDRLIGDGQSALVFLEFTALALPNLVRMVLPV 60 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 + V +N +EL ++ TGTS + KP L ++ ++ + I +++ P + Sbjct: 61 AAFAASVWVTNRLNSESELTVLRATGTSPWQMAKPALVFGLITAVMMSILTHVLLPASIA 120 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 T++Q ++ +T L E F + I + +P+ TL +F+ D R+ Y Sbjct: 121 TLEQRESEVARNVTAKLLSEGDFLHPARGVTFYIGRIDPDGTLNDVFLSDRRNAAESVTY 180 Query: 188 YAQSGSIDLD--RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA--NSSTIVLKAN 243 + D R +++ DG R + ++ +S F ++ S + Sbjct: 181 TGGKAYLVRDGERTHLVMVDGMSQRINTETQRLSSTIFSDFSYDISSLANKAEEKTRNIR 240 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 LL P E H R + L V LI A R Sbjct: 241 AIPSLELLGDRAKLVADGPYSAGALAEELHLRFARALVCVAVVLIGFAALMLGGFSRFG- 299 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 ++ + V + + QN P++Y+ + L+ + Sbjct: 300 VWRQALLAFVLLIFVEGLRGVVSEPVLQNAELWPLIYIPTLIGLLVGLVFL 350 >gi|163739704|ref|ZP_02147112.1| permease YjgP/YjgQ [Phaeobacter gallaeciensis BS107] gi|161386934|gb|EDQ11295.1| permease YjgP/YjgQ [Phaeobacter gallaeciensis BS107] Length = 376 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 63/351 (17%), Positives = 129/351 (36%), Gaps = 5/351 (1%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 +L F L +V + W+ + + + + +S + L+ + +P ++ MV P Sbjct: 1 MLSQYLLFFGFFALILVAVFWINRAVVLFDRLIGDGQSALVFLEFTALALPNLVRMVLPV 60 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 + V +N +EL ++ TGTS + KP + ++ ++ + I +++ P + Sbjct: 61 AAFAASVWVTNRLNSESELTVLRATGTSPWQMAKPAMVFGLITAVMMSILTHVLLPASIA 120 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 T++Q ++ +T L E F + I + +P+ TL +F+ D R+ Y Sbjct: 121 TLEQRESEVARNVTAKLLSEGDFLHPARGVTFYIGRIDPDGTLNDVFLSDRRNAAESVTY 180 Query: 188 YAQSGSIDLD--RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA--NSSTIVLKAN 243 + D R +++ DG R + ++ +S F ++ S + Sbjct: 181 TGGKAYLVRDGERTHLVMVDGMSQRINTETQRLSSTIFSDFSYDISSLANKAEEKTRNIR 240 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 LL P E H R + L V LI A R Sbjct: 241 AIPSLELLGDRAKLVADGPYSAGALAEELHLRFARALVCVAVVLIGFAALMLGGFSRFG- 299 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 ++ + V + + QN P++Y+ + L+ + Sbjct: 300 VWRQALLAFVLLIFVEGLRGVVSEPVLQNAELWPLIYIPTLIGLLVGLVFL 350 >gi|99080790|ref|YP_612944.1| permease YjgP/YjgQ [Ruegeria sp. TM1040] gi|99037070|gb|ABF63682.1| permease YjgP/YjgQ [Ruegeria sp. TM1040] Length = 379 Score = 246 bits (627), Expect = 6e-63, Method: Composition-based stats. Identities = 66/359 (18%), Positives = 127/359 (35%), Gaps = 5/359 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M ++ Y+L F L +V + W+ + + + + +S+ L+IS +P + Sbjct: 1 MSRYDRYVLSQYLLFFGFFALILVAVFWINRAVSLFDWLIGDGQSVLAFLEISALSLPNL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + MV P T V +N +EL ++ TG+S L +P + +L + + Sbjct: 61 VRMVLPLAAFAATVWVTNRLNSESELTVLRATGSSPWQLARPAMVFGLLSAAMMSALSLF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + ++ A+ +++ L F + + I P+ TLQ +F+ D RD Sbjct: 121 LLPASLAQMQFREAELSRSVSAKLLNAGSFLHPSEGITFFIGSIEPDGTLQNVFLTDQRD 180 Query: 181 TQTHKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFK--SYTLQTESANSS 236 Y + + D +IL DG RK + +S F SY L S + Sbjct: 181 PSVEITYTSDRAYLVREDDEAHLILVDGLAQRKEAHNDRLSTTAFSDFSYPLGDLSPARA 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + LL + E H R + +I + Sbjct: 241 AGARPLRNIPTLDLLRERASITEEEGHSAGAQAEELHLRFARAAVTFAVVMIGVSTLLMG 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 R + + + + + + +N P++YL I +L + Sbjct: 301 GFSRFG-IWKQVLGAFVLLILIEGMRGVVADPVRENAAMWPLIYLPATLGVMISVLFLH 358 >gi|114569777|ref|YP_756457.1| permease YjgP/YjgQ family protein [Maricaulis maris MCS10] gi|114340239|gb|ABI65519.1| permease YjgP/YjgQ family protein [Maricaulis maris MCS10] Length = 373 Score = 245 bits (625), Expect = 9e-63, Method: Composition-based stats. Identities = 67/367 (18%), Positives = 138/367 (37%), Gaps = 10/367 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y + F+ + +A + Q L ++LVS +E+ +K++ +P + Sbjct: 1 MILVQRYFFNQLLWPFMTAIAAFAGLALLTQSLSNVDLVSGYSETALTFIKVTALALPHL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + + L + ++EL+I G SR L+ P++ L + + I + Sbjct: 61 TALLVPIALFVAVLSSLNRLTGDSELVIASAAGVSRFGLLSPIMRLGVYVLIANLAVNLL 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 ++P +++ + + S + F +L + I + + +Q I I DSR Sbjct: 121 LQPVAYREMRRSLHTLRSDVAASLVTPGAFSQLGQGVTIYARERGRDGRMQDILIHDSRG 180 Query: 181 TQTHKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 T Y A+ G + DR A++L DG + + + ++ F Y + Sbjct: 181 TDGASTYSAREGVVVRSGDRSAMVLIDGNLQQID-SAGELYYANFDRYEFDLGEFVGPAD 239 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + K +D+ L LL P+ R E +E H RL+ L+ + F LI+ Sbjct: 240 AMFFKESDRYLHELLWPSAA-EVARTGGPERAWAEAHYRLSAPLYNLAFALIAAACFLAG 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL---FCISSIFLLM 353 R + I++ + + + YL + + Sbjct: 299 DHSRMG-YGRRVMIAVGAGLTLRLVGFAMQSASADDAAMNVAQYLVPVFGMVGAVAVIYW 357 Query: 354 IKKKYTK 360 + + Sbjct: 358 PARNRPR 364 >gi|254510429|ref|ZP_05122496.1| permease YjgP/YjgQ [Rhodobacteraceae bacterium KLH11] gi|221534140|gb|EEE37128.1| permease YjgP/YjgQ [Rhodobacteraceae bacterium KLH11] Length = 379 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 65/358 (18%), Positives = 132/358 (36%), Gaps = 5/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y LR + F L +V + W+ + + + V S +S + L+ + +PT+ Sbjct: 1 MSRFDGYFLRQLLVLFGFFTLVLVGVFWITRSVSLFDRVISGGQSAFVFLEFTALTLPTL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P ++R +E+ ++ TG+S L + VL + + + + Sbjct: 61 IRTVMPMAVFAAAVYATNRLSRESEMTVMLATGSSPWRLARAVLMFGLSAGLMMAVISVF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P ++Q A+ +T L E F D + + IS+ + + TL +F+ D RD Sbjct: 121 LRPASVERLEQRQAEVAGDVTAQLLNEGEFLHPADGVTVYISRIDLDGTLHEVFVSDRRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKS--YTLQTESANSS 236 T Y + + + +++ DG R +S F+ Y + + N+ Sbjct: 181 TVNPVSYSSTTAYLVNQASGIHLVMLDGVALRFDQQGNTLSSTLFEDAAYDVSELTNNTG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 T L+ L E H+R + + L+ Sbjct: 241 TDNRSREAIPTIELIRDRDTVAETDDHSLGQLVDELHQRFSWIAICIAVALVGYSTLMLG 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + R I + +I + ++ + ++P +LYL + L + Sbjct: 301 SFSR-FGLWPQILGAFTILVLLEGVRGFVSPVVIEDPRLWVLLYLPAILGVVVSGLFL 357 >gi|294678216|ref|YP_003578831.1| permease YjgP/YjgQ family protein [Rhodobacter capsulatus SB 1003] gi|294477036|gb|ADE86424.1| permease YjgP/YjgQ family protein [Rhodobacter capsulatus SB 1003] Length = 376 Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats. Identities = 61/367 (16%), Positives = 140/367 (38%), Gaps = 9/367 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y+L + F L +V + WV + + + + ++ ++L+ + +P V Sbjct: 1 MKRLDRYLLSQLMAIFGFFALVLVSVYWVNRAVLLFDKLIGDGQTAWVVLEFTALTLPKV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V P + ++ +EL+++ + G S L +PV ++++ + + Sbjct: 61 ISLVLPVAAFAAVLYAINRLSGESELVVMQSAGASPWRLARPVAVFGLIVAALMLALVHE 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P R+ + + A+ +T +L E F + + I + + L IF+ D+R Sbjct: 121 LVPASRARLAERQAQVSQDVTARFLTEGSFQTPTAGITVYIREISDLGELLDIFLYDARG 180 Query: 181 TQTHKIYYAQSGSIDLD--RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + IY A+ I +++ DG P +++ +F +T A + + Sbjct: 181 QRAETIYTAEKALIVPSEAGPKLVMFDGTAQTLRPSDGSLALTRFSDFTYDLGGAIGTGL 240 Query: 239 VLKAN--DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + + L+ P P + E + RL Q L + LI+ A Sbjct: 241 RGRIDWEEVPSRDLIAPGPELLAATGSTVAAAHLELNDRLAQPLMAPVAALIAAAAMMLG 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF----LFCISSIFLL 352 R I +++ G+ + +P + Y+ L ++ Sbjct: 301 GFSRLG-LWRQIGLAVLALIGLQSLSNVATSMTRADPALWALHYMPALAGLAGVALALSW 359 Query: 353 MIKKKYT 359 +++ Sbjct: 360 AGRRRKA 366 >gi|126462312|ref|YP_001043426.1| permease YjgP/YjgQ family protein [Rhodobacter sphaeroides ATCC 17029] gi|126103976|gb|ABN76654.1| permease YjgP/YjgQ family protein [Rhodobacter sphaeroides ATCC 17029] Length = 376 Score = 243 bits (621), Expect = 3e-62, Method: Composition-based stats. Identities = 68/363 (18%), Positives = 137/363 (37%), Gaps = 8/363 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y+L + F L +V + W+ + + + + S +S + L+ S +P V Sbjct: 1 MARFDRYLLSQLVALFGFFSLVLVLVYWINRAVGLFDDLISDGQSALVFLEFSLLALPNV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V P T V+ +++ +EL+++ TG S L +PV++ +++++ + + N+ Sbjct: 61 IRLVLPLSAFAATIYVVNRLSQESELVVMQATGFSAFRLARPVIWFGLIVALMMIVLMNL 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P R+T+ SA+ T +L + F D + + I + L+ + +VD RD Sbjct: 121 LVPASRATLSARSAEISQNATARFLRDGEFLHPADGVTLYIREVTETGELRDLLLVDDRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKS--YTLQTESANSS 236 Y A+ + +++ DG + + + + +F Y L S Sbjct: 181 PARSTAYTARRALLVRTDTTPKLLMIDGSAQTLTREGRRLELTRFDDVTYDLGAFMTGSG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + LL P E H R+ Q LI A Sbjct: 241 PKRRVLEELPTMTLLAPTAEVLEETRSTRAAALYEGHSRIGQPFLGFASSLIGFAALLLG 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL---FCISSIFLLM 353 + R I ++ + V + P+ Y F I + L + Sbjct: 301 SFSR-FGLWWQILFAVLLLIVVQTINVAASGVGVTDEQLWPLAYAAPVTGFVIGILLLWI 359 Query: 354 IKK 356 ++ Sbjct: 360 GQR 362 >gi|77463457|ref|YP_352961.1| permease [Rhodobacter sphaeroides 2.4.1] gi|77387875|gb|ABA79060.1| Predicted permease [Rhodobacter sphaeroides 2.4.1] Length = 376 Score = 243 bits (621), Expect = 3e-62, Method: Composition-based stats. Identities = 68/363 (18%), Positives = 137/363 (37%), Gaps = 8/363 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y+L + F L +V + W+ + + + + S +S + L+ S +P V Sbjct: 1 MARFDRYLLSQLVALFGFFSLVLVLVYWINRAVGLFDDLISDGQSALVFLEFSLLALPNV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V P T V+ +++ +EL+++ TG S L +PV++ +++++ + + N+ Sbjct: 61 IRLVLPLSAFAATIYVVNRLSQESELVVMQATGFSAFRLARPVIWFGLIVALMMIVLMNL 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P R+T+ SA+ T +L + F D + + I + L+ + +VD RD Sbjct: 121 LVPASRATLSARSAEISQNATARFLRDGEFLHPADGVTLYIREVTETGELRDLLLVDDRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKS--YTLQTESANSS 236 Y A+ + +++ DG + + + + +F Y L S Sbjct: 181 PARSTAYTARRALLVRTDTTPKLLMIDGSAQTLTREGRRLELTRFDDVTYDLGAFMTGSG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + LL P E H R+ Q LI A Sbjct: 241 PKRRVLEELPTMTLLAPTAEVLEETRSTRAAALYEGHSRIGQPFLGFASSLIGFAALLLG 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL---FCISSIFLLM 353 + R I ++ + V + P+ Y F I + L + Sbjct: 301 SFSR-FGLWWQILFAVLLLIVVQTINVAASGVGVTDEQLWPLAYAAPVTGFAIGILLLWI 359 Query: 354 IKK 356 ++ Sbjct: 360 GQR 362 >gi|16125936|ref|NP_420500.1| hypothetical protein CC_1691 [Caulobacter crescentus CB15] gi|221234699|ref|YP_002517135.1| hypothetical protein CCNA_01762 [Caulobacter crescentus NA1000] gi|13423102|gb|AAK23668.1| conserved hypothetical protein [Caulobacter crescentus CB15] gi|220963871|gb|ACL95227.1| hypothetical membrane spanning protein [Caulobacter crescentus NA1000] Length = 379 Score = 242 bits (619), Expect = 5e-62, Method: Composition-based stats. Identities = 59/363 (16%), Positives = 137/363 (37%), Gaps = 7/363 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ E Y+ R + L++ +V +A + + L +++ +S + LKI +P + Sbjct: 1 MRLIERYLFRQLLGPTLLATAALVALALLARSLSEFDVLVEQRQSALVFLKIILLALPQL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + L ++ E+++ G SR +I P + LA++ ++ IS Sbjct: 61 LGIMMPLALFVAALVALNRLHTEQEIVVCFAGGMSRWRVISPAMRLAVIAALISLISGLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 ++P I++ + + + + + ++ F L + + +N +Q +FI Sbjct: 121 LQPWSARQIRETAFQIKTDVAATLVQPGQFTEPGPGLTVYAQSIDRDNKIQNLFIHQELP 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA--NSS 236 Y ++ I +I+ G + S + F YT S + Sbjct: 181 NGAASTYSSREAEIATRKGEPVLIMRHGSNQQFSRD-GVLQYTSFDEYTFDLSSLFHSDE 239 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + K D+ L P+ + + +E H R L+ + +++ A Sbjct: 240 LLHYKIADRYPHELFFPDLTQEWEQRNK-DKLLAEGHSRFAGPLYNIALMSMALAAVLGG 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + R + + + GF + E +P+ + Y+ ++ + I + Sbjct: 299 SFSRMGYGKRIAAVGAAAAIVRIVGF-GVQAACEDDPWLNVLQYIVPLAATAWAMSQIFR 357 Query: 357 KYT 359 + Sbjct: 358 QRV 360 >gi|259419313|ref|ZP_05743230.1| permease YjgP/YjgQ [Silicibacter sp. TrichCH4B] gi|259345535|gb|EEW57389.1| permease YjgP/YjgQ [Silicibacter sp. TrichCH4B] Length = 379 Score = 241 bits (616), Expect = 1e-61, Method: Composition-based stats. Identities = 60/359 (16%), Positives = 129/359 (35%), Gaps = 5/359 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M ++ Y+L F L +V + W+ + + + + +S+ L+IS +P + Sbjct: 1 MSRYDRYVLSQYLLFFGFFALILVAVFWINRAVSLFDWLIGDGQSVLAFLEISALSLPNL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + MV P T V +N +EL ++ TG+S L +P + +L + + Sbjct: 61 VRMVLPLAAFAATVWVTNRLNSESELTVLRATGSSPWQLARPAMAFGVLSAAMMSALSLF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + ++ A+ +++ L F + + +P+ TL +F+ D RD Sbjct: 121 LLPASLAQMQLREAELSRSVSAKLLNAGNFLHPSAGITFFVGSIDPDGTLNNVFLTDQRD 180 Query: 181 TQTHKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 Y + + D +IL DG RK + +S F ++ + + Sbjct: 181 PSVEITYTSDRAYLVREDDMAHLILVDGLAQRKEAHNDRLSTTAFADFSYPLGDLSPART 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPE--LLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + +N+ L + + E E H R + +I + Sbjct: 241 MGARPLRNIPTLDLLRDRDEITQNEGHSAGAQAEELHLRFARAAVTFAVVMIGVSTLLLG 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 R + ++ + + + + N P++YL I ++ + Sbjct: 301 GFSRFG-IWKQVLVAFVLLILIEGMRGVVSEPVRDNAQMWPLIYLPAAIGVLISMIFLH 358 >gi|254453241|ref|ZP_05066678.1| permease YjgP/YjgQ family protein [Octadecabacter antarcticus 238] gi|198267647|gb|EDY91917.1| permease YjgP/YjgQ family protein [Octadecabacter antarcticus 238] Length = 372 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 61/352 (17%), Positives = 132/352 (37%), Gaps = 5/352 (1%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 +L + F L +V I W+ + ++ + + + +S + L+++ +P+++ +V P Sbjct: 1 MLGQLLVFFGFFSLILVLIYWINRAVRLFDRLIADGQSAWVFLELTSLSLPSLIRIVLPL 60 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 + V M+ ++EL ++ TG S L +PV+ +++++ + I NI+ P Sbjct: 61 SAFVAAVYVTNRMSSDSELTVVQATGYSPFRLARPVIVFGVIVAVLMSILTNILVPLSTE 120 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 + A+ +T L F DD+ I + P + IFI +S Y Sbjct: 121 RLITRQAEIAQTMTARLLTPGEFLTPTDDVTFYIRELPPGGEMLDIFISESTSPTQRTTY 180 Query: 188 YAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA--N 243 A + + +++ DG + + + +F+ + + + V K N Sbjct: 181 TASRAYLVRTENGPQLVMVDGLTQTLNLETSRLLTTRFEDFVYNVSALMNDDPVRKTSVN 240 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 + LL P+ + + + H R+ Q + GL+ A R Sbjct: 241 GLSTMALLRPSAETIADTNQTGDQLKLRGHDRIAQAALGFVAGLVGFSALVVGGFSRFG- 299 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 I ++ + + N P +YL I +++ Sbjct: 300 LWRNIIFAVGLVILLKLLEGTGTSIATTNAALWPFVYLAGIGGVVISAMLLH 351 >gi|149914658|ref|ZP_01903188.1| 4-hydroxythreonine-4-phosphate dehydrogenase [Roseobacter sp. AzwK-3b] gi|149811451|gb|EDM71286.1| 4-hydroxythreonine-4-phosphate dehydrogenase [Roseobacter sp. AzwK-3b] Length = 380 Score = 239 bits (611), Expect = 4e-61, Method: Composition-based stats. Identities = 55/353 (15%), Positives = 131/353 (37%), Gaps = 6/353 (1%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 +L F L +V I W+ + ++ + + + + L+ + +P V+ ++ P Sbjct: 1 MLSQFMVLFGFFALVLVSIFWINKAVRMFDRLIGDGQPAWVFLEFTALTLPGVIGVILPM 60 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 T V ++ +EL ++ TG S L++PV+ IL+++ + + + + P S Sbjct: 61 AAFAATVYVTNRLSTESELTVVQATGYSPWRLMRPVIVFGILIALMMSLLTHFLIPSSLS 120 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 ++ + +T L E F + I P+ L +F+ D RD++ Y Sbjct: 121 QLRLRQDEVSQNITAKLLTEGEFLHPAPGITFYIRDITPDGELHNVFMSDRRDSENTMTY 180 Query: 188 YAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAND 244 + + D + +++ DG + F ++ + +S Sbjct: 181 TSNRAYLIQDPEGGTKLLMVDGLAQTVRRDGNRLFTTHFNDFSYDISALIASEATSLDKV 240 Query: 245 QNLSFL-LNPNPNNPNYRP-ELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 L + +P R + E + R +Q L ++ +I + R Sbjct: 241 TFAHTLDIARDPRAVADRTLSTVSQVIFELNNRFSQPLLCIVAAVIGFASLLLGGFSR-F 299 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 I ++ ++ + S + + + P++YL + + +++ Sbjct: 300 GVWRQILLAFTLLIVIKLVESRVSGLVLAHSDLWPLMYLPAALGALVTAVLLH 352 >gi|83952306|ref|ZP_00961038.1| Predicted permease [Roseovarius nubinhibens ISM] gi|83837312|gb|EAP76609.1| Predicted permease [Roseovarius nubinhibens ISM] Length = 372 Score = 239 bits (610), Expect = 6e-61, Method: Composition-based stats. Identities = 60/359 (16%), Positives = 125/359 (34%), Gaps = 6/359 (1%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 +L F L +V I W+ + ++ + + S +S + L+++ +P V+ +V P Sbjct: 1 MLSQFMVLFGFFALVLVSIFWINKAVRMFDRLISDGQSSFVFLELTALTLPGVIAVVLPI 60 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 V ++ +EL ++ TG S L +PVL ++++ + + +++ P Sbjct: 61 AGFAGAVYVTNRLSTESELTVMQATGYSPWRLARPVLIYGVIVAAMMSLLTHVLVPTSLH 120 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 ++ A+ +T L E F + I + P L+ +F+ D RD Q IY Sbjct: 121 RLETRKAEVSRNVTAKLLTEGEFLHPAGGVTFYIREITPEGELRDVFLSDRRDIQAPVIY 180 Query: 188 YAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQ 245 ++ + +++ +G + F ++ S ++ + + Sbjct: 181 TSKMAYLVQEGGGTKLVMVNGLAQTAQTKGNRLFTTFFTDFSYDISGLISDDVINLTHAR 240 Query: 246 N--LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 L+ E H R Q L V+ LI R Sbjct: 241 YASTPALMTRAAEIAQISGVSEGVVTLELHNRFAQALMCVVAALIGFATLLLGTYSRFG- 299 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL-FCISSIFLLMIKKKYTKI 361 I ++ + V + I P P+ Y + LL+ ++ Sbjct: 300 VWRQILLAFLLLVAVKLVEGTLTSPILSAPELWPLAYAPPAMGFVLVVLLLYMASRPRL 358 >gi|83594275|ref|YP_428027.1| permease YjgP/YjgQ [Rhodospirillum rubrum ATCC 11170] gi|83577189|gb|ABC23740.1| permease YjgP/YjgQ [Rhodospirillum rubrum ATCC 11170] Length = 396 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 65/369 (17%), Positives = 149/369 (40%), Gaps = 13/369 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + YILR + + + ++ + W+I L+ ++ + S+ L+++ L+P L Sbjct: 5 TLHRYILRNLLVGLAVGSVALIVLIWLINSLKFLDWFVNKGLSVATFLRLTLLLMPGFLT 64 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + + EL+++ G L +P L L +L+ + + Sbjct: 65 VFIPIALFAVVLFTYNRLAADRELIVMRAAGMGPWQLARPALALCAVLTGVGYWLTLSVV 124 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + + + + ++ ++E F ++ D L + + + L + I D+ Sbjct: 125 PAMEGAFEAIKYEVRGEVSSLVIKEGQFNQMKDGLIVYAGERAKDGRLIDLMIHDTTGKT 184 Query: 183 THKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST--I 238 + A+SG++ + + I+L +G ++ + ++ + F SY + +ST Sbjct: 185 SDLTVMAESGALVREGEGARILLINGNRQERNRQTGKVNFLYFDSYAVDLGGKAASTEMR 244 Query: 239 VLKANDQNLSFLL------NPNPNNP-NYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 + ++ LS L+ +P+ P Y + R E H RL + L + F LI + Sbjct: 245 FREERERPLSELISLKAGDRIDPDYPFTYEERHIRRMRMEAHLRLLRPLAHIGFLLIGLA 304 Query: 292 AADKRALVRQRKKIHPIF-ISLSISF-GVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 A R+ I ++L + F G + + K + ++ L + I Sbjct: 305 AVLTGEFDRRGGNKRVILAVALVVLFQAGSLGAATVAKKSLDGLLLLDLMTLLPILVGWI 364 Query: 350 FLLMIKKKY 358 +L+ +++ Sbjct: 365 WLVWPSERW 373 >gi|255264665|ref|ZP_05344007.1| permease YjgP/YjgQ family protein [Thalassiobium sp. R2A62] gi|255107000|gb|EET49674.1| permease YjgP/YjgQ family protein [Thalassiobium sp. R2A62] Length = 380 Score = 237 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 61/352 (17%), Positives = 134/352 (38%), Gaps = 5/352 (1%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y+L + F L ++ + WV + + + + + +S + L+ + +P V+ Sbjct: 9 RLDRYMLSQLMMLFGFFSLVLIMVYWVNRAVILFDQLIADGQSAGVFLEFTALSLPNVIR 68 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + V ++ ++EL ++ TG S + L +PV+ +L++ + + +++ Sbjct: 69 LVLPLSAFAASVYVTNRLSTDSELTVMQATGHSAVRLARPVIVFGLLVTALMMVLTHVLV 128 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P S + A+ +T L E F + + + + + L IF+ D+R+ + Sbjct: 129 PTSLSRLNDREAEIAENVTARLLTEGTFLNPASGITFYVREISASGELLDIFLTDTRNPK 188 Query: 183 THKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSSTI 238 Y A+ + D +++ +G + ++ ++ F T + S Sbjct: 189 RQITYTAEQSFLVRSDDGPQLVMINGLTQTLTLETQRLTTTTFADSTFDIGGLIDSGSRG 248 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + + LL P + T E H R Q L V+ L+ Sbjct: 249 RVNIREVATMDLLYPTQEIRDLTRRDDATLIHEGHGRFLQALLAVVAALVGFSTLLIGGF 308 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 R I I++ + + S + I + PI+Y + I Sbjct: 309 SRFG-ISKQIVIAIFLLIAIKTVESVAVGAIRGQAHLWPIIYTPIAVGLVIS 359 >gi|146277168|ref|YP_001167327.1| permease YjgP/YjgQ family protein [Rhodobacter sphaeroides ATCC 17025] gi|145555409|gb|ABP70022.1| permease YjgP/YjgQ family protein [Rhodobacter sphaeroides ATCC 17025] Length = 376 Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 63/347 (18%), Positives = 132/347 (38%), Gaps = 5/347 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y+L + F L +V + W+ + + + + S +S + L+ S +P V Sbjct: 1 MSRFDRYLLSQLVALFGFFSLVLVLVYWINRAVGLFDDLISDGQSALVFLEFSLLALPNV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V P T ++ +++ +EL+++ TG S L +PV+ +++++ + + N+ Sbjct: 61 IRLVLPLSAFAATIYIVNRLSQESELVVMQATGFSAFRLARPVILFGLIVAMMMIVLMNL 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P R+T+ SA+ T +L + F + + I + + L + +VD RD Sbjct: 121 LVPASRATLSARSAEISENATARFLRDGEFLHPVRGVTLYIREISETGELNDLLLVDDRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 IY A+ + +++ DG + + + + +F T + S Sbjct: 181 RARSTIYTARRALLVRTETTPRLLMIDGSAQTLTREGRRLELTRFADVTYDLGAFMKSDG 240 Query: 239 VLKA--NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + + LL P E H R+ Q + LI A Sbjct: 241 PKRRVLEELSTPDLLAPTEALLAETRSTRAAALYEGHSRIAQPFLGLASSLIGFAALLLG 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 + R I ++ + V + P+ Y Sbjct: 301 SFSR-FGLWWQILFAVVLLIVVQTINVAASGVGVTDEALWPLAYAAP 346 >gi|302383687|ref|YP_003819510.1| permease YjgP/YjgQ family protein [Brevundimonas subvibrioides ATCC 15264] gi|302194315|gb|ADL01887.1| permease YjgP/YjgQ family protein [Brevundimonas subvibrioides ATCC 15264] Length = 376 Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 63/360 (17%), Positives = 137/360 (38%), Gaps = 8/360 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+ R I L +C + I + Q L ++ ++ +S+ +LLK++ +P + Sbjct: 1 MTLIQKYLFRQISLPVLAACASLAGIGILSQTLDQLEIIVERGQSVWVLLKLTLLAVPQL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + LT + R EL +G SR +I P +LA+ +++ + ++ + Sbjct: 61 FSVILPIGLFVGALIALTRLQREQELTAAYASGMSRWQMIAPGAWLAVCVAVVMLLTNVV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I+P + T ++ + + L +EE F + + L + + + N L+ +FI ++ Sbjct: 121 IQPWSQRTAREQAFSIRTDLAALLVEEGRFVQGPNGLTVYVQQIEQNGLLKNLFIY-IQN 179 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 + A + + + G + S + + + F Y + Sbjct: 180 GDEVTTWDASEARFGRVDGQPVLTMKQGSWQQYS-SAGVLQQLVFDGYVFPLGQYVTDDQ 238 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 I K D + L NP +E H RL+ L+ + +++ A Sbjct: 239 KIRYKPADLWMGQLFNPTDA-LVRDTGSRGELLAEAHSRLSSPLYALTAMAMALTAILGG 297 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 A R S V ++ N + Y+ +++ L ++ + Sbjct: 298 AFSRTGYSARIAKAS-GAFLLVRVVGYAVVAASAWNGWLNVFQYVLPIVATAVALRLLFR 356 >gi|126725340|ref|ZP_01741182.1| Predicted permease [Rhodobacterales bacterium HTCC2150] gi|126704544|gb|EBA03635.1| Predicted permease [Rhodobacterales bacterium HTCC2150] Length = 367 Score = 235 bits (600), Expect = 7e-60, Method: Composition-based stats. Identities = 62/359 (17%), Positives = 142/359 (39%), Gaps = 6/359 (1%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 +L + +F +V + WV + + + S + + L+ + +P V+ +V P Sbjct: 1 MLSQLTVTFGFFAFILVAVYWVNRAIVLFEDLISDGHTALVFLEFTALALPNVILLVLPV 60 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 + + V + +E++++ + G S L+ P L + + + + I +I+ P R+ Sbjct: 61 AGFVASIYVANRLISESEMVVMQSAGHSAKRLMVPALIFGVGIFVMMSILSHILVPISRT 120 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 + + + +T +L F +DL I + +++ L+ I + D R IY Sbjct: 121 ALAEREGELSQDVTTQFLNAGRFVHPSNDLTIYVREFSETGELRDILLTDDRSANIQTIY 180 Query: 188 YAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSSTIVLKAN 243 A + +++ G+ + + +S + F T + +S VL Sbjct: 181 TANRAFLIKTETGPRLVMLSGQTQTLNRTTDRLSFVTFTELTYDLSALIPSSKERVLNMR 240 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 + LL + + + ++++ H R ++ L +I L+ + R Sbjct: 241 ELFTPALLRGDQADLDRTNSTTAIFKAQAHGRFSKPLLGMILPLLGVAVMLVGGFNRMG- 299 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-FLFCISSIFLLMIKKKYTKI 361 I S I V F+ + NP P++YL +F ++ +++L+ + Sbjct: 300 VSRQILASAVIIILVQMLFNAGENAAISNPTMWPMIYLPIVFAVALLWMLLFLTARPSL 358 >gi|148265754|ref|YP_001232460.1| permease YjgP/YjgQ family protein [Geobacter uraniireducens Rf4] gi|146399254|gb|ABQ27887.1| permease YjgP/YjgQ family protein [Geobacter uraniireducens Rf4] Length = 389 Score = 235 bits (600), Expect = 7e-60, Method: Composition-based stats. Identities = 78/370 (21%), Positives = 155/370 (41%), Gaps = 16/370 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K+ LYI + I FL+ F+ + ++L+ +V + L +L++ YL+P+ L Sbjct: 3 KTLYLYIFKEIPPPFLLGVATFTFVLLMGRLLRLAEMVVTKGVPLADVLRMVFYLLPSFL 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P F + ++ ++E+ + +G S L+ PV A++ + Sbjct: 63 LVTIPMAFLLAILLAFGRLSGDSEITAMKASGVSLYGLLPPVFCFALIAYLAGAFITVYA 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSRD 180 P ++ K+L + A ++E +F L I +YN T+ GI I D RD Sbjct: 123 VPWGNTSFKKLLVEVVEARASLGIKEKIFNDDFPGLVIYTDRYNQQKQTMSGILIQDERD 182 Query: 181 TQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTE-SANS 235 YA+SG I+ D + L++G +HR + +++F++Y L + + Sbjct: 183 PLEPSTIYARSGVINSDPATKSIRLRLDNGSIHRTQGKTG-YRLVEFRNYDLNINLNQAA 241 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 T+ D +L+ L N + + +++ R E+H+R + +IF L+ + Sbjct: 242 QTVNKNELDMSLAEL-RANLASGRFDAKMMRDMRLEYHRRFSLPFACLIFALVGM---PL 297 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF----LFCISSIFL 351 ++ K +S+ + + S E+ P+L ++ LF I+L Sbjct: 298 GIQNQRSGKAAGFTMSIGLLLAYYIVLSAGKALGEREL-LSPLLAVWAPNLLFVSLGIYL 356 Query: 352 LMIKKKYTKI 361 +I Sbjct: 357 FKTTAAEERI 366 >gi|322418227|ref|YP_004197450.1| permease YjgP/YjgQ family protein [Geobacter sp. M18] gi|320124614|gb|ADW12174.1| permease YjgP/YjgQ family protein [Geobacter sp. M18] Length = 387 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 67/360 (18%), Positives = 141/360 (39%), Gaps = 16/360 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 ++ YI I FL+ + F+ + + L+ +V +L++ YL+P+ Sbjct: 3 RTLYRYIFNEIPPPFLVGMVAFTFVLLMGRFLKLAEMVVEKGVPFTDVLRMVSYLLPSFW 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + ++ ++E+ + + G S L+ P L ++L S+ Sbjct: 63 LFTIPMALLLSILLAFGRLSGDSEVTAMKSCGISLYGLLPPPLVFSLLASLACLWVTVYA 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSRD 180 P S+ K+L + ++E +F D+ I + ++G+ + D RD Sbjct: 123 VPWGNSSFKKLMLEIARNSASVSIKEKVFNNAFPDMVIYADTLDTKAQNMEGVIVHDERD 182 Query: 181 TQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + +A SG++ D +A L +G +HR S + +++F+ Y L+ A + Sbjct: 183 PKAPTTIFAASGALFSDPKAHSMEFQLKNGSIHR-SEDGANYRMVQFQEYILRVALAEPT 241 Query: 237 TI-VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 KA++ + L++P + + R E H RL ++F + + Sbjct: 242 PKGPRKASEMTIDELVHPPQ---VAAAKDVLARRLELHSRLALPFSCIVFTFVGV---PL 295 Query: 296 RALVRQRKKIHPIFISLSISFGVFW---GFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 R+ K +S+++ + GF + K P+ LF ++ +L Sbjct: 296 GIQNRRSGKASGFSLSIAVILCYYIALSGFDTLGEKALLPPFLSGWGPNLLFLLAGGYLF 355 >gi|90419502|ref|ZP_01227412.1| possible permease [Aurantimonas manganoxydans SI85-9A1] gi|90336439|gb|EAS50180.1| possible permease [Aurantimonas manganoxydans SI85-9A1] Length = 392 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 84/362 (23%), Positives = 174/362 (48%), Gaps = 7/362 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E YI + S +V I W++Q L RI++V +S + + + I+ L+P + Sbjct: 1 MTILERYIFKRAFVYAASSLTSLVLIVWIVQALSRIDVVKTSASAASNIFWIALMLLPDL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 V PF + L S+N ++E +I G S+ + +P++ L +L + + + N+ Sbjct: 61 FAGVLPFALLIGAIQALNSLNSDSERAVISAAGASQAVIARPIVALGLLGGLIMLLIGNV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P S + + +L+ F ++ D + I I N T++ + I D+RD Sbjct: 121 VGPASMSAFQNGIRSINADMITLFLKPGRFEQVQDGIVISIGDVN-GATVESLVIADTRD 179 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST- 237 + Y+A+ I + + ++L DG++HR++ +S+++F++Y + +T Sbjct: 180 PASDLTYFAREAKIIDEDASSLLLLFDGQLHRRNTADNSVSVIQFQTYAFDLAALRPATD 239 Query: 238 -IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 ++A++++ + L+ P+PN+ Y+ E ++ E R+T WLF + F L +IV A + Sbjct: 240 NSWVRASERSTAALIWPDPNDGLYQ-ERPHSFTEELTDRMTNWLFAIAFVLWAIVVAGQP 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + RQ + + L + + +IEQ +++ I YL + ++I + Sbjct: 299 STNRQGTG-PAMTVGLCGGLVLKAAGFVTLSQIEQGVFWVVISYLLPLAAIVLNSVLIWR 357 Query: 357 KY 358 + Sbjct: 358 NF 359 >gi|89054305|ref|YP_509756.1| permease YjgP/YjgQ [Jannaschia sp. CCS1] gi|88863854|gb|ABD54731.1| permease YjgP/YjgQ [Jannaschia sp. CCS1] Length = 371 Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats. Identities = 67/341 (19%), Positives = 133/341 (39%), Gaps = 4/341 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M ++ YILR + F L +V + WV Q + + + + +++ + L+ S +P + Sbjct: 1 MGQYDRYILRQLVALFGFFSLVLVSVYWVNQAARLFDRLIADGQNIGVFLEFSALTLPWI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + T + M +EL+++ G S + L++PV LL+I L + NI Sbjct: 61 VQLILPVSAFVATLYIFNRMISESELVVLQTAGLSALRLLRPVFVFGCLLAILLAVLVNI 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P R Q A+ Q LT +L F L + I + + + +F+ D+ Sbjct: 121 LAPTARGQFTQRQAEVQDDLTGRFLRAGEFIHPAAGLTVYIREISELGEFRDLFLQDAST 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS-T 237 Y A + + +++ DG + +S + F +T + + Sbjct: 181 PGVEVTYTANTALLVRSDTGPRLVMFDGVAQTLDLDTGRLSTISFSDFTYSVGTLGGTGA 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + LL N L E H RL Q LF + LI+ + + Sbjct: 241 RQIDVRELPTPLLLRANQQIAGALNLPLSHLVFEGHDRLAQSLFVLFVPLIAAASLMLGS 300 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 R I I++++ + + + + P+ Sbjct: 301 FSRFG-VWKQILIAVALVLPMQIVRNASEAAVRADIEAWPM 340 >gi|126736391|ref|ZP_01752133.1| hypothetical protein RCCS2_01329 [Roseobacter sp. CCS2] gi|126714212|gb|EBA11081.1| hypothetical protein RCCS2_01329 [Roseobacter sp. CCS2] Length = 369 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 62/351 (17%), Positives = 124/351 (35%), Gaps = 5/351 (1%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 +L + F L ++ I W+ + + + + + +S + L+ + +P+V+ + P Sbjct: 1 MLSQLMVLFGFFSLVLILIYWINRAVVLFDQLIADGQSAGVFLEFTALSLPSVMRLALPL 60 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 V M+ +EL ++ TG S L +PVL+ I++++ + + + P + Sbjct: 61 AAFAAAVYVTNRMSTESELTVVQATGYSPFRLARPVLYFGIIVALMMSALMHFLVPMSAA 120 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 + A+ +T L E F + + I P LQ IF+ D+R Y Sbjct: 121 RLADRQAEIAQNITARLLTEGQFLEPINGVTFYIRDITPAGELQDIFLSDTRSDAEQVTY 180 Query: 188 YAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQ 245 A + D +++ DG V ++ + F + D Sbjct: 181 TATKAFLVRDNDTIQLVMLDGMVQTLRTENQRLFTTTFDDFAYNISDLIRQPRNRGRRDA 240 Query: 246 NL--SFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 L LLNP P S H R +Q + ++ L+ A R Sbjct: 241 YLFTWELLNPTPALEAETGRDAARLISLGHDRFSQSILGIVAALLGFSALMVGGYSR-FG 299 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 I ++ + V + + +P + YL + ++ Sbjct: 300 VWKQIIGAIFLIIVVKAVETTGLRIARSDPQLWMVAYLQSAVGFVMIWFLL 350 >gi|218459006|ref|ZP_03499097.1| putative permease protein [Rhizobium etli Kim 5] Length = 250 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 91/231 (39%), Positives = 148/231 (64%), Gaps = 1/231 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YILR +G+ FL++ L ++ I W Q+LQRINLV+ S +S+ K++ ++P++ Sbjct: 11 MKLLETYILRRVGQMFLVALLPVLAIIWTTQVLQRINLVTDSGQSIGSFAKLATMILPSI 70 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T LT+MN ++EL +ID G R LI+P+L LA ++S+F F +NI Sbjct: 71 IPVVLPFALVIAITQTLTTMNNDSELTVIDAAGARRSILIRPILLLAAVISVFSFFVDNI 130 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP+ ++ +Q+ A+ L S +EE F +LD+ LY++IS+ L+G+F+ D RD Sbjct: 131 VEPRAKTVARQMIAETYADLLSSVIEEKTFRKLDEGLYVQISQRLAGRMLKGLFVADERD 190 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 IYYA+ G++D +I++DGEVHRK+P ++S++ F SY+ Sbjct: 191 PAYELIYYAKEGAVDDTGTTLIMHDGEVHRKTPD-GNVSVINFDSYSFDLS 240 >gi|222054621|ref|YP_002536983.1| permease YjgP/YjgQ family protein [Geobacter sp. FRC-32] gi|221563910|gb|ACM19882.1| permease YjgP/YjgQ family protein [Geobacter sp. FRC-32] Length = 389 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 73/366 (19%), Positives = 143/366 (39%), Gaps = 8/366 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI + I F + F+ + ++L+ ++V + L +L++ YL+P+ L Sbjct: 3 STLYRYIFKEIPPPFFLGVATFTFVLLMGRLLRLTDMVVTKGVPLGDVLRMILYLLPSFL 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P F + ++ ++E++ + +G S L+ PV LA++ + Sbjct: 63 LVTIPMAFLLAILLAFGRLSGDSEIIAMKASGISLYGLLPPVFSLAVITYLAGAFITIYA 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRD 180 PK S K L ++E +F + I Y+ + GI I D RD Sbjct: 123 VPKGNSAFKDLLVTVVENRVSLGVKEKVFNGDFPGIVIYCDGYDERTQVMSGIIIQDERD 182 Query: 181 TQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 A G+I+ D + + L G +HR + + +++F Y L + +S Sbjct: 183 PLEPSTIMAGHGTINADHASRSVRLHLASGSIHR-TAGREGYRLVQFSDYDLHINLSQAS 241 Query: 237 TIVLK-ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 V + D +L+ L N N+ ++ + R E+H+R + +IF L+ + + Sbjct: 242 QAVKRDERDMSLAEL-RTNWNSNHFDNKGRLEMRLEYHRRFSLPFACLIFTLVGMPLGIQ 300 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + L + + + + K NP+ + LF I+L Sbjct: 301 NQRSGKAAGFAISIFLLLLYYIILSACKTLGEKELLNPFLAAWVPNMLFVAFGIYLFRKT 360 Query: 356 KKYTKI 361 KI Sbjct: 361 AAEEKI 366 >gi|221639315|ref|YP_002525577.1| permease Yjgp/YjgQ family protein [Rhodobacter sphaeroides KD131] gi|221160096|gb|ACM01076.1| Permease YjgP/YjgQ family protein [Rhodobacter sphaeroides KD131] Length = 364 Score = 229 bits (583), Expect = 7e-58, Method: Composition-based stats. Identities = 64/351 (18%), Positives = 131/351 (37%), Gaps = 8/351 (2%) Query: 13 GRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAME 72 F L +V + W+ + + + + S +S + L+ S +P V+ +V P Sbjct: 1 MALFGFFSLVLVLVYWINRAVGLFDDLISDGQSALVFLEFSLLALPNVIRLVLPLSAFAA 60 Query: 73 TTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQL 132 T V+ +++ +EL+++ TG S L +PV++ +++++ + + N++ P R+T+ Sbjct: 61 TIYVVNRLSQESELVVMQATGFSAFRLARPVIWFGLIVALMMIVLMNLLVPASRATLSAR 120 Query: 133 SAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSG 192 SA+ T +L + F D + + I + L+ + +VD RD Y A+ Sbjct: 121 SAEISQNATARFLRDGEFLHPADGVTLYIREVTETGELRDLLLVDDRDPARSTAYTARRA 180 Query: 193 SIDLDRQA--IILNDGEVHRKSPISKDISIMKFKS--YTLQTESANSSTIVLKANDQNLS 248 + +++ DG + + + + +F Y L S + Sbjct: 181 LLVRTDTTPKLLMIDGSAQTLTREGRRLELTRFDDVTYDLGAFMTGSGPKRRVLEELPTM 240 Query: 249 FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPI 308 LL P + E H R+ Q LI A + R I Sbjct: 241 TLLAPTADVLEETRSTRAAALYEGHSRIGQPFLGFASSLIGFAALLLGSFSR-FGLWWQI 299 Query: 309 FISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL---FCISSIFLLMIKK 356 ++ + V + P+ Y F I + L + ++ Sbjct: 300 LFAVLLLIVVQTINVAASGVGVTDEQLWPLAYAAPVTGFAIGILLLWIGQR 350 >gi|332558334|ref|ZP_08412656.1| permease [Rhodobacter sphaeroides WS8N] gi|332276046|gb|EGJ21361.1| permease [Rhodobacter sphaeroides WS8N] Length = 364 Score = 228 bits (582), Expect = 8e-58, Method: Composition-based stats. Identities = 64/351 (18%), Positives = 130/351 (37%), Gaps = 8/351 (2%) Query: 13 GRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAME 72 F L +V + W+ + + + + S +S + L+ S +P V+ +V P Sbjct: 1 MALFGFFSLVLVLVYWINRAVGLFDDLISDGQSALVFLEFSLLALPNVIRLVLPLSAFAA 60 Query: 73 TTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQL 132 T V+ +++ +EL+++ TG S L +PV++ +++++ + + N++ P R+T+ Sbjct: 61 TIYVVNRLSQESELVVMQATGFSAFRLARPVIWFGLIVALMMIVLMNLLVPASRATLSAR 120 Query: 133 SAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSG 192 SA+ T +L + F D + + I + L+ + +VD RD Y A+ Sbjct: 121 SAEISQNATARFLRDGEFLHPADGVTLYIREVTETGELRDLLLVDDRDPARSTAYTARRA 180 Query: 193 SIDLDRQA--IILNDGEVHRKSPISKDISIMKFKS--YTLQTESANSSTIVLKANDQNLS 248 + +++ DG + + + + +F Y L S + Sbjct: 181 LLVRTDTTPKLLMIDGSAQTLTREGRRLELTRFDDVTYDLGAFMTGSGPKRRVLEELPTM 240 Query: 249 FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPI 308 LL P E H R+ Q LI A + R I Sbjct: 241 TLLAPTAEVLEETRSTRAAALYEGHSRIGQPFLGFASSLIGFAALLLGSFSR-FGLWWQI 299 Query: 309 FISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL---FCISSIFLLMIKK 356 ++ + V + P+ Y F I + L + ++ Sbjct: 300 LFAVLLLIVVQTINVAASGVGVTDEQLWPLAYAAPVTGFAIGILLLWIGQR 350 >gi|167646492|ref|YP_001684155.1| permease YjgP/YjgQ family protein [Caulobacter sp. K31] gi|167348922|gb|ABZ71657.1| permease YjgP/YjgQ family protein [Caulobacter sp. K31] Length = 378 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 61/350 (17%), Positives = 127/350 (36%), Gaps = 7/350 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ E Y+ R + L++ L +V +A + + L +++ +S + LKI +P + Sbjct: 1 MRLIERYLFRQLLGPTLLATLALVALALLARSLSEFDVLIEQRQSAMVFLKIIALALPQL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + L ++ E+++ G SR +I P + LA+L ++ Sbjct: 61 LSVILPIALFVAALVALNRLHTEQEIVVCFAGGMSRWRVISPAMRLAVLATLISLAMSLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P I++ + L + + F L + + + + +FI + Sbjct: 121 VAPWSSRAIRETFFDMKSDLASTLVRPGEFTEPGPGLTVYAQVIDRDQIIHNVFIHQEKP 180 Query: 181 TQTHKIYYAQSGSIDLDR--QAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 Y A+SG I + +IL G S + + + + YT S + Sbjct: 181 NGAAVTYTARSGVIAERKGLPVLILRKGSNQEFS-STGVLQYLSWDEYTFDLSSLFQSDE 239 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + K D+ L P+ + + SE H RL L+ + +++ A Sbjct: 240 LLHYKIGDRYPHELFFPDLAQEWEQ-QNRVKLLSEGHWRLASPLYNMAMMSMALAAVIGG 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCI 346 + R + + + GF + N + + Y Sbjct: 299 SFSRMGYGKRIAMVGAAAAMVQIVGFGVKA-ACDNNVWLNGLQYAVPLAA 347 >gi|197119769|ref|YP_002140196.1| membrane protein [Geobacter bemidjiensis Bem] gi|197089129|gb|ACH40400.1| membrane protein, YjgP-related protein [Geobacter bemidjiensis Bem] Length = 391 Score = 225 bits (575), Expect = 6e-57, Method: Composition-based stats. Identities = 64/363 (17%), Positives = 140/363 (38%), Gaps = 17/363 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K+ YI + I FL+ + F+ + + L+ +V + ++++ YL+P Sbjct: 7 KTLYAYIFKEIPTPFLVGMVTFTFVLLMGRFLKLAEMVVEKGIPFSDVVRMVAYLLPPFW 66 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + ++ ++E+ + + G S L+ P + A ++ Sbjct: 67 LFTIPMALLLAMLLAFGRLSGDSEITAMKSCGISLYGLLPPPMLFAACATLACLWVTVYA 126 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSRD 180 P S K+L + + ++E +F + + + T+ G+ + D RD Sbjct: 127 VPWGNSGFKKLMVEIAQSSAGIAIKEKIFNNAFPGMVVYTQSLDTKAQTMGGVIVHDERD 186 Query: 181 TQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 +T +A +G++ D ++ L +G +HR +++F+ Y L+ A+ S Sbjct: 187 PRTPTTIFASTGALVSDPKSNSMEFQLRNGSIHRAE-EQGGYRMVQFQEYNLRVALADGS 245 Query: 237 T-IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 K ++ L LL+P + + + + E+H RL +F L++I Sbjct: 246 NKATRKVSEMTLDELLHPPK---GTQQKEIISRDLEYHSRLALPFSCFVFTLLAI---PL 299 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF---LFCISSIFLL 352 R+ K +S+ + + S + + P+L + L + + L Sbjct: 300 GIQNRRSGKAAGFSLSIGVILLYYVTLSAF-DTLGERGTLPPLLAGWSPNLIFLLAGAYL 358 Query: 353 MIK 355 K Sbjct: 359 FKK 361 >gi|56698597|ref|YP_168974.1| hypothetical protein SPO3780 [Ruegeria pomeroyi DSS-3] gi|56680334|gb|AAV97000.1| membrane protein, putative [Ruegeria pomeroyi DSS-3] Length = 375 Score = 225 bits (575), Expect = 6e-57, Method: Composition-based stats. Identities = 56/359 (15%), Positives = 131/359 (36%), Gaps = 5/359 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y LR + +V + W+ + + + + SS ++ + L+ + +PT+ Sbjct: 1 MSKFDGYFLRQLLVLCGFFAFVLVGVFWISKAVSLFDRLISSGQTAMVALEFTALTLPTL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P T V +NR +E+ ++ TG+S L +PV+ ++ + L Sbjct: 61 VRTVMPMAAFCATVYVTNRLNRESEMTVMLATGSSPFRLARPVILFGLVCAAMLATITLY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P ++ A+ +T L + F + + I K + + TL +++ D R Sbjct: 121 LRPAAMLRLEARQAEVAGDMTAQLLNDGQFMHPVKGVTVYIGKIDRDGTLNDVYLSDRRA 180 Query: 181 TQTHKIYYAQSGSIDLDRQ--AIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + Y + + + A+++ +G + + +S F+ ++ + I Sbjct: 181 PERVVTYTSSKAFLARSGEQIALVMVEGTALQMETGRRTLSTTVFRDFSYDISALAKRDI 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPEL--LETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + + + L + E E +RL+ V LI Sbjct: 241 ERRQDIRGMPTLALATAFDGEGLAETYSRGEISEELQERLSWIGVSVAVTLIGFSTLMLG 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 R + + + + S + +P + + ++ +L +K Sbjct: 301 TFSR-FGLWPQLIAAFAGLIALEGMRSTATAFVGSHPGLWWVQHAPALGGIALSILFLK 358 >gi|89070356|ref|ZP_01157663.1| Predicted permease [Oceanicola granulosus HTCC2516] gi|89044003|gb|EAR50178.1| Predicted permease [Oceanicola granulosus HTCC2516] Length = 370 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 58/342 (16%), Positives = 131/342 (38%), Gaps = 5/342 (1%) Query: 13 GRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAME 72 F L ++ + WV + + + + S +S + L+ S +P ++ +V P + Sbjct: 1 MTLFGFFSLVLILLYWVNRAVVLFDQLISDGQSALVFLEFSALSLPAIIRIVLPLAAFIA 60 Query: 73 TTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQL 132 V + +ELL++ +TG S + L +P +++++ +++ P + + Sbjct: 61 ALYVTNKLTTESELLVVQSTGFSPVRLARPAFVFGLIVTLLTGALTHVLVPVAAAQLGAR 120 Query: 133 SAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSG 192 + +T +L F D + + + N LQ +F+ D+R++ IY A + Sbjct: 121 QDEIASNITARFLTPGQFLNPVDGITVYVRDINDAGALQDLFLADTRESGRQVIYTAATA 180 Query: 193 SID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSF- 249 + +++ DG + + +F +T S + ++N+ Sbjct: 181 YLVRSEGGPQLVMVDGLAQTLRGSDQRLYTTRFDDFTYDIGRLIVSEEPGRLRERNVWSG 240 Query: 250 -LLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPI 308 LL +P R+E H R+ + L + ++ A R I Sbjct: 241 PLLQASPALQAQIERPAVALRAEVHDRMNKALLGFVGPVLGFAALLIGGFSR-FGVWRQI 299 Query: 309 FISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 +++ + V S ++ +P P+LY+ +I Sbjct: 300 VVAVVLVVVVTSLESVSSTLVDADPTRWPLLYMPTLVGLAIA 341 >gi|310816137|ref|YP_003964101.1| putative permease, YjgP/YjgQ family [Ketogulonicigenium vulgare Y25] gi|308754872|gb|ADO42801.1| putative permease, YjgP/YjgQ family [Ketogulonicigenium vulgare Y25] Length = 379 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 65/362 (17%), Positives = 138/362 (38%), Gaps = 4/362 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y+L + F L ++ + WV + + + + S + + + ++ + +P + Sbjct: 1 MGRFDRYLLSQLMTLFGFFSLVLIMVYWVNRAVALFDQLISDGQGMWVFVEFTALSLPAI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V P + + V ++ +EL+++ +TG S +++ V+ ++ + + I ++ Sbjct: 61 IKLVLPLSAFVASVYVANRLSGESELVVVQSTGFSPARVMRAVMVFGLIAVVMVQILAHV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + A+ T L F + + I P LQ +F+ DSR Sbjct: 121 LVPLSNQRLNIRQAEVTQTATARILRAGEFMTPIAGVTLYIRSITPEGELQDVFLSDSRA 180 Query: 181 TQTHKIYYAQSGSIDLDR--QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + IY A I +++ DG + S ++ +S F + S S Sbjct: 181 SLADTIYTASRAYIVRTERAPQLVMVDGSIQNLSHQTERMSFTTFSDFAYDLSSILPSVD 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + +N + L + + R+E H RL++ L +I L+ Sbjct: 241 PAALSLRNATTLQLLLARDEMTLLFGADNIRTEIHDRLSEPLLGLIGPLLGFATLLIGGF 300 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF-LFCISSIFLLMIKKK 357 R I ++ + V S I ++ LYL +F + LL+ Sbjct: 301 SR-FGLSRQIAAAVGLVILVKMIESTATGAIRRDAGLWWTLYLPAVFGLGITGLLLFLAA 359 Query: 358 YT 359 Sbjct: 360 RP 361 >gi|83945296|ref|ZP_00957645.1| hypothetical protein OA2633_00975 [Oceanicaulis alexandrii HTCC2633] gi|83851466|gb|EAP89322.1| hypothetical protein OA2633_00975 [Oceanicaulis alexandrii HTCC2633] Length = 375 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 75/348 (21%), Positives = 146/348 (41%), Gaps = 8/348 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y R FL + + +A + Q L ++L++ E+ +L+ I+ +P V Sbjct: 1 MTLFQRYTFRQALWPFLGAMAALTGLAVLTQSLSNLDLMAERGETALVLITITVLAMPQV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + L + ++EL + G SR + P L LAI + + + Sbjct: 61 IALLLPIAVFLAVAIALNRLTSDSELTVAAAAGMSRFQRVSPFLRLAIYVVLVNLVINLF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 ++P ++Q + + L S++ E F L D + + + + ++ L +FI+D R Sbjct: 121 VQPASFRLMRQQLFEIRTDLAASFMREGEFVPLGDQVTFYVREISDDSVLNDVFIMDDR- 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIIL--NDGEVHRKSPISKDISIMKFKSYT--LQTESANSS 236 T Y A+ G I + ++ DG + S ++ + F S L N++ Sbjct: 180 TGQSAAYAARRGRIAATDRGPVMLLEDGVRTQVD-QSGVLTNLSFDSTKVELTLFVDNTA 238 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 ++ K +D+ L LL P P + R +E H RL+ L+ + F LI++ A Sbjct: 239 SLFFKESDKYLPELLRPTPADIA-RAGGKGRLYAEGHYRLSAPLYNLAFALIALAAYMSG 297 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 R+ + I+ + + + I E + + YL Sbjct: 298 E-HRRIGYGRNLIIAGASAVVLRLTGFAIQAAAESDDAMNAVQYLVPL 344 >gi|159043739|ref|YP_001532533.1| permease YjgP/YjgQ family protein [Dinoroseobacter shibae DFL 12] gi|157911499|gb|ABV92932.1| permease YjgP/YjgQ family protein [Dinoroseobacter shibae DFL 12] Length = 380 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 54/344 (15%), Positives = 128/344 (37%), Gaps = 6/344 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + ++ YIL + +F L IV I W+ + ++ +S + L + ++S +P + Sbjct: 2 LARYDRYILGRLMVTFGFFTLIIVLIYWINRSIRLFERLSGDGQGLALFAQLSLLSLPYL 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + M ++E + + G S +++P L++ ++ + + + ++ Sbjct: 62 IYLMLPLAAFASAVSTGNRMGSDSETVALQAAGISAFRIVRPALYMGVMAAALMLLLAHL 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P R I L + ++ LE F D + + +++ L + + D RD Sbjct: 122 LVPMSRVAIADLEEQLADEVSARLLEPGKFQSPIDGVTVFVAEITGEGVLSKVLLSDQRD 181 Query: 181 TQTHKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE--SANSS 236 IY A + +++ G +S ++F+ + L Sbjct: 182 PAEEVIYTANQALLVRSDTGPQLVMISGLAQ-FLRADGTLSTLQFEDFALGLGEVEVPED 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 ++ + + LL +P + + + SE H+RL + L+ A Sbjct: 241 RVLRDLRGWDTARLLRADPADLESVGKSRGAFLSEAHRRLANPALAISTALLGFSALLVG 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY 340 R L++ + + + + P+LY Sbjct: 301 GFSRFGFWQQVAGAILAL-IVIQLSVNMSEEIAQSDAAAWPVLY 343 >gi|157804262|ref|YP_001492811.1| hypothetical protein A1E_05575 [Rickettsia canadensis str. McKiel] gi|157785525|gb|ABV74026.1| hypothetical protein A1E_05575 [Rickettsia canadensis str. McKiel] Length = 360 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 64/364 (17%), Positives = 158/364 (43%), Gaps = 13/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M +E Y ++ I ++ + I W+ Q+L+ + L + + ++PT+ Sbjct: 1 MLLYEKYFIKNILPLLIVVTFSVTSIVWITQVLKLLYLF-DKGIKVMDFFSLIVLVLPTL 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + + ++ +++I+ +G + L P L++A+++ + + + Sbjct: 60 LFILLPVITVIAVIYIYNNLKVERQIIILQASGVHNVQLALPALYVALIVMLLAYYISST 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P +K + + S +EE F ++ D+ + I K + N + G+ I D+R+ Sbjct: 120 IMPLSHINLKSRLSFIKNNYISSMIEEKTFNKVTKDITVFIDKKSAGNIMNGVIIFDNRN 179 Query: 181 TQTHKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES-----A 233 + +A SG+++ + LN G I+ +++ + F S ++ ++ Sbjct: 180 ADNLSVVFADSGTLNIYDNSPIFELNKGLRQE-HDINGNLTQLTFNSLMIKLQNDNPLIP 238 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + +AN+ +S LL P P++ ++ +E H+R+ L+ + +++ Sbjct: 239 QRTKHNKEANEYYISELLAP-PHDLAVTKKI--KLIAEAHQRIIWPLYNFVLPFLALAVF 295 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + ++ + +F +L++ F + + +N +I Y L +I L + Sbjct: 296 LRYPYSKKTTFMPVLFSALTVLLVTSIHF-ILQNFASKNLNFIFACYSNLVIALTIGLYL 354 Query: 354 IKKK 357 +K Sbjct: 355 FVRK 358 >gi|39997020|ref|NP_952971.1| hypothetical protein GSU1922 [Geobacter sulfurreducens PCA] gi|39983908|gb|AAR35298.1| membrane protein, putative [Geobacter sulfurreducens PCA] Length = 399 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 58/343 (16%), Positives = 127/343 (37%), Gaps = 9/343 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI F + F+ + ++L+ +V + + ++ Y++P+ Sbjct: 14 RLLFRYICTETAVPFALGLTVFTFVLLMGRLLKLAEMVFARGVPFLDVTRLILYMLPSFF 73 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P F + + ++ ++E+ + +G S T+ PV+ ++ Sbjct: 74 LVAIPMAFLLAVLLAMGRLSADSEVTAMKASGMSIGTIAVPVIAFGVITYAATTFVSVYA 133 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRD 180 P + K+ + E +F L I + ++P + + GI I D R+ Sbjct: 134 LPWGNTAFKKFLHGVIETRAAMSITEKVFNDEFPGLVIYVDGFDPKSGRISGILIHDERN 193 Query: 181 TQTHKIYYAQSGSIDLDRQ----AIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 +A SG + + + + LN+G +HR + +++F SY L Sbjct: 194 PDEPSTIFAASGQLATNPEERIVRLRLNNGGIHRGI-GTGGYRLVEFTSYDLSIALQREQ 252 Query: 237 T-IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 L D L LL +P +P+L+ E HKR V+F +I++ + Sbjct: 253 QKARLNEEDMTLGELLAR-MKSPGEQPKLVREMHFELHKRFALPFACVVFAVIAVPLGIQ 311 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 + I L + + + +++ P ++ + Sbjct: 312 NQRSGRAGGFAAGIILLMLYYILMSAGKT-VNEKGIAPAFVAV 353 >gi|15893268|ref|NP_360982.1| hypothetical protein RC1345 [Rickettsia conorii str. Malish 7] gi|15620488|gb|AAL03883.1| unknown [Rickettsia conorii str. Malish 7] Length = 378 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 65/365 (17%), Positives = 158/365 (43%), Gaps = 13/365 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y ++ I ++ + I W+ QIL+ + L + + ++PT+ Sbjct: 19 MLLYRKYFIKNILPLLIVVTFSVTSIVWITQILKLLYLF-DKGIKVMDFFSLIVLVLPTL 77 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + + ++ +L+I+ +G + + L P L++A+++ + + + Sbjct: 78 LFILLPVIMVITVIYIYNNLKVERQLIILQASGVNNVQLALPALYVALIVMLLAYYISSN 137 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P +K + S +EE F ++ D+ + I K + N + G+ I D+R+ Sbjct: 138 ILPLSHINLKSRLNFIKNNYISSMIEEKTFNKVTKDITVFIDKKSAGNIMNGVIIFDNRN 197 Query: 181 TQTHKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--- 235 + +A SG+++ + LN G ++ +++ + F S ++ ++ N Sbjct: 198 ADNPSVVFAGSGTLNIYDNSPIFELNKGIRQEYD-VNGNLTQLTFDSLMIKLQNDNPLVS 256 Query: 236 --STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + +AN+ +S LL P P++ ++ +E H+R+ L+ + +++ Sbjct: 257 QRTKHNKEANEYYISELLAP-PHDLAITKKI--KLIAEAHQRIIWPLYNFVLPFVALAVF 313 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + ++ + +F +L++ F + + +N +I Y L +I L + Sbjct: 314 LRYPYSKKTTFMPVLFSALTVLLVTSIHF-ILQNFASKNLDFIFACYFNLVIALTIGLYL 372 Query: 354 IKKKY 358 +K Sbjct: 373 FVRKR 377 >gi|238651117|ref|YP_002916975.1| hypothetical protein RPR_07620 [Rickettsia peacockii str. Rustic] gi|238625215|gb|ACR47921.1| hypothetical protein RPR_07620 [Rickettsia peacockii str. Rustic] Length = 369 Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats. Identities = 65/365 (17%), Positives = 158/365 (43%), Gaps = 13/365 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y ++ I ++ + I W+ QIL+ + L + + ++PT+ Sbjct: 10 MLLYRKYFIKNILPLLIVVTFSVTSIVWITQILKLLYLF-DKGIKVMDFFSLIVLVLPTL 68 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + + ++ +L+I+ +G + + L P L++A+++ + + + Sbjct: 69 LFILLPVITVITVIYIYNNLKVERQLIILQASGVNNVQLALPALYVALIVMLLAYYISSN 128 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P +K + S +EE F ++ D+ + I K + N + G+ I D+R+ Sbjct: 129 ILPLSHINLKSRLNFIKNNYISSMIEEKTFNKVTKDITVFIDKKSAGNIMNGVIIFDNRN 188 Query: 181 TQTHKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--- 235 + +A SG+++ + LN G ++ +++ + F S ++ ++ N Sbjct: 189 ADNPSVVFASSGTLNIYDNSPIFELNKGIRQEYD-VNGNLTQLTFDSLMIKLQNDNPLVS 247 Query: 236 --STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + +AN+ +S LL P P++ ++ +E H+R+ L+ + +++ Sbjct: 248 QRTKHNKEANEYYISELLAP-PHDLAITKKI--KLIAEAHQRIIWPLYNFVLPFVALAVF 304 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + ++ + +F +L++ F + + +N +I Y L +I L + Sbjct: 305 LRYPYSKKTTFMPVLFSALTVLLVTSIHF-ILQNFASKNLDFIFACYFNLVIALTIGLYL 363 Query: 354 IKKKY 358 +K Sbjct: 364 FVRKR 368 >gi|165933910|ref|YP_001650699.1| hypothetical protein RrIowa_1576 [Rickettsia rickettsii str. Iowa] gi|165908997|gb|ABY73293.1| hypothetical protein RrIowa_1576 [Rickettsia rickettsii str. Iowa] Length = 369 Score = 220 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 65/365 (17%), Positives = 158/365 (43%), Gaps = 13/365 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y ++ I ++ + I W+ QIL+ + L + + ++PT+ Sbjct: 10 MLLYRKYFIKNILPLLIVVTFSVTSIVWITQILKLLYLF-DKGIKVMDFFSLIVLVLPTL 68 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + + ++ +L+I+ +G + + L P L++A+++ + + + Sbjct: 69 LFILLPVIMVITVIYIYNNLKVERQLIILQASGVNNVQLALPALYVALIVMLLAYYISST 128 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P +K + S +EE F ++ D+ + I K + N + G+ I D+R+ Sbjct: 129 ILPLSHINLKSRLNFIKNNYISSMIEEKTFNKVTKDITVFIDKKSAGNIMNGVIIFDNRN 188 Query: 181 TQTHKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--- 235 + +A SG+++ + LN G ++ +++ + F S ++ ++ N Sbjct: 189 ADNPSVVFAGSGTLNIYDNSPIFELNKGIRQEYD-VNGNLTQLTFDSLMIKLQNDNPLVS 247 Query: 236 --STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + +AN+ +S LL P P++ ++ +E H+R+ L+ + +++ Sbjct: 248 QRTKHNKEANEYYISELLAP-PHDLAITKKI--KLIAEAHQRIIWPLYNFVLPFVALAVF 304 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + ++ + +F +L++ F + + +N +I Y L +I L + Sbjct: 305 LRYPYSKKTTFMPVLFSALTVLLVTSIHF-ILQNFASKNLDFIFACYFNLVIALTIGLYL 363 Query: 354 IKKKY 358 +K Sbjct: 364 FVRKR 368 >gi|149915564|ref|ZP_01904090.1| hypothetical protein RAZWK3B_06402 [Roseobacter sp. AzwK-3b] gi|149810456|gb|EDM70299.1| hypothetical protein RAZWK3B_06402 [Roseobacter sp. AzwK-3b] Length = 376 Score = 220 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 62/354 (17%), Positives = 129/354 (36%), Gaps = 5/354 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y++R + F L ++ I W+ + L+ + +S +LL++ +P V Sbjct: 1 MTKFDQYVIRKLITLFAFFALILIAIFWLDKALRMFERLLGKGQSNWLLLELILLTLPPV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P +V ++ E+ I+ +G S +I+P+ IL + + N Sbjct: 61 VASILPIASFASAVSVTNRLSSEAEITIMKASGCSTYRIIRPIFIFGILTTSLMAWLTNS 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P+ + L ++ +T S+L E F + + I K + L+ IF+ D RD Sbjct: 121 ILPESGKRLSSLRSQVDQNITSSFLTEGEFLHPTPGVTLFIGKVTQDAELRRIFLSDRRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + I A+ + +++ DG + + +F+ Y L +T Sbjct: 181 LRETIIITAEKAYTEHSPTTVQLLMVDGTTQILRENDNKLFVGRFEEYALDISELVETTY 240 Query: 239 VLKA--NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L+ L E H R Q + I ++ Sbjct: 241 STQKTVTQAKTVELIKQPSEVIASTKATLGEVAFELHNRFAQPILCAIAAVLGATTLLTG 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 + R I I+ + G+ S + + + ++Y+ + + Sbjct: 301 SYSR-FGVWRQIGIAFFLLVGLKLVESAVSAHVLNDSGLWFLMYVPSISGAVLI 353 >gi|295689676|ref|YP_003593369.1| permease YjgP/YjgQ family protein [Caulobacter segnis ATCC 21756] gi|295431579|gb|ADG10751.1| permease YjgP/YjgQ family protein [Caulobacter segnis ATCC 21756] Length = 380 Score = 220 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 61/352 (17%), Positives = 129/352 (36%), Gaps = 7/352 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ E Y+ R + L++ +V +A + + L +++ +S + LKI +P + Sbjct: 1 MRLIERYLFRQLLGPTLLATAALVALALLARSLSEFDVLVEQRQSAVVFLKIILLALPQL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + L ++ E+++ G SR +I P + LA++ ++ IS Sbjct: 61 LAIMMPLALFVAALVALNRLHTEQEIVVCFAGGMSRWAVISPAMRLAVMAALISLISGLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 ++P I++ + + + + ++ F L + N +N +Q +FI Sbjct: 121 LQPWSARQIRETAFDIKTDVASTLVQPGQFTEPGPGLTVYAQSINRDNKIQNLFIHQEMP 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 Y ++ I + +I+ G + S + F YT S + Sbjct: 181 NGGASTYSSREAEIATRKGQPVLIMRHGSNQQFSRQ-GVLQYTSFDEYTFDLSSLFRSDE 239 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + K D+ L P+ R + + +E H R L+ + ++I A Sbjct: 240 LLHYKIADRYPHELFFPDMTQDWER-QNRDKMLAEGHSRFAGPLYNLALMAMAIAAVIGG 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 R I + + V + +P + YL + Sbjct: 299 PFSRMGYGKR-IAAVGAAAGVVRIAGFGVQAACADSPELNVLQYLVPLTAMA 349 >gi|149201833|ref|ZP_01878807.1| permease YjgP/YjgQ [Roseovarius sp. TM1035] gi|149144881|gb|EDM32910.1| permease YjgP/YjgQ [Roseovarius sp. TM1035] Length = 373 Score = 220 bits (560), Expect = 4e-55, Method: Composition-based stats. Identities = 52/341 (15%), Positives = 122/341 (35%), Gaps = 5/341 (1%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 +L F L +V I W+ + ++ + + + + ++ + +P V+ +V P Sbjct: 1 MLSQFMVLFGFFALVLVSIFWINKAVRMFDRLIGDGQPAWVFVEFTALTLPGVIGVVLPI 60 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 V+ ++ +EL ++ TG S + L +PV +++++ + + + + P S Sbjct: 61 AAFAAAVYVVNRLSSESELTVMQATGYSPLRLARPVFVFGVIVAVMMSLLAHFLIPSSLS 120 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 ++ + +T L E F + I + + L+ +F+ D RD + Y Sbjct: 121 QLRLRLDEVSRNITAKLLSEGEFLHPAPGVTFYIREITLSGELRDVFLSDRRDPEAPVTY 180 Query: 188 YAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV--LKAN 243 + + +++ G + F ++ S +V + Sbjct: 181 TSSRAYLVQEGGGTRLVMVSGLAQNIRAEQNRLFTTYFDDFSYDISSLVRRDVVNLDEVA 240 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 +L + ++ H R+T L VI L+ A R Sbjct: 241 FAGTLEMLRDPEAVAARTGVSMGAVMAQMHGRITAALLCVIAALVGFCTLLVGAHSR-FG 299 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 + ++ + G+ S ++ + + P+LYL Sbjct: 300 VWRQVLLAFGLLVGLKIVESLVLAPVLASAVLWPLLYLPAL 340 >gi|78222463|ref|YP_384210.1| permease YjgP/YjgQ [Geobacter metallireducens GS-15] gi|78193718|gb|ABB31485.1| permease YjgP/YjgQ [Geobacter metallireducens GS-15] Length = 418 Score = 219 bits (559), Expect = 5e-55, Method: Composition-based stats. Identities = 57/361 (15%), Positives = 135/361 (37%), Gaps = 12/361 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 YI + F++ F+ + ++L+ +V + + ++ Y++P+ L Sbjct: 32 SILFRYIFKETAVPFVLGMAVFTFVLLMGRLLKLAEMVFAKGVPFLDVCRLILYMLPSFL 91 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P F + ++ ++E+ + G +L+ PV A+L + Sbjct: 92 LVAIPMAFLLAVLLSFGRLSADSEVTAMKAGGVGLGSLLTPVFTFAVLAYLVTTFITVFA 151 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRD 180 P ++ K+ + + + ++E +F L + I Y+ ++ + GI I D R+ Sbjct: 152 LPWGNTSFKRFLYEVIESRAATTIKEKVFIDDFPGLVVYIDDYDQTSHQISGILIHDERN 211 Query: 181 TQTHKIYYAQSGSIDLDRQ----AIILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANS 235 +A +G I + + L +G +HR +++F+SY L + N+ Sbjct: 212 PDEPMTIFASTGIIAAAPEEKNVRLHLVNGSIHRGI-DPGGYRLVEFRSYDLHVDLRQNA 270 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 D L L+ + N + E HKR ++F ++ + Sbjct: 271 KKNQFDEQDMTLKQLIA-SRGNRQNNEKFRRDVSIELHKRFALPFACIVFAMVGV---PL 326 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFLLMI 354 ++ + + I + S E+ IP+ ++L ++ + ++ Sbjct: 327 GIQNQRSGRAGGFSAGIIILMLYYVVMSAGKTIAEKEILPIPLAVWLPNVFFTAFGVYLL 386 Query: 355 K 355 + Sbjct: 387 R 387 >gi|157826358|ref|YP_001494078.1| hypothetical protein A1C_06735 [Rickettsia akari str. Hartford] gi|157800316|gb|ABV75570.1| hypothetical protein A1C_06735 [Rickettsia akari str. Hartford] Length = 360 Score = 219 bits (558), Expect = 6e-55, Method: Composition-based stats. Identities = 63/365 (17%), Positives = 155/365 (42%), Gaps = 13/365 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y ++ I ++ + I W+ QIL+ + L + + ++PT+ Sbjct: 1 MLLYRKYFIKNILPLLIVVTFSLTSIVWITQILKLLYLF-DKGIKVMDFFNLIVLVLPTL 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + + ++ +L+I+ +G + + L P L++A+++ + + + Sbjct: 60 LFILLPVITVIAIIYIYNNLKVERQLIILQASGVNNVQLALPALYVALIVMLLAYYISST 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P +K + S +EE F ++ D+ + I K + N + G+ I D+R+ Sbjct: 120 IMPLSHINLKSHLNFIKNNYISSMIEEKTFNKVTKDITVFIDKKSAGNIMNGVIIFDNRN 179 Query: 181 TQTHKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE-----SA 233 + +A SG+++ + LN G ++ +++ + F S ++ + ++ Sbjct: 180 ADNPSVVFAGSGTLNIYDNNPIFELNKGLRQEYD-VNGNLTQLTFDSLMIKLQNDNHLAS 238 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + +AN+ +S LL P + + +E H+R+ L+ + +++ Sbjct: 239 QRTQHNKEANEYYISELLAPTHDLVITKKI---KLIAEAHQRIIWPLYNFVLPFLALAVF 295 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + ++ + +F +L++ F + + +N +I Y L +I L + Sbjct: 296 LRYPYSKKTTFMPVLFSTLTVLLVTSIHF-ILQNFASKNLDFIFACYSNLVIALTIGLYL 354 Query: 354 IKKKY 358 +K Sbjct: 355 FVRKR 359 >gi|91206136|ref|YP_538491.1| putative permeases [Rickettsia bellii RML369-C] gi|91069680|gb|ABE05402.1| Putative permeases [Rickettsia bellii RML369-C] Length = 360 Score = 219 bits (557), Expect = 7e-55, Method: Composition-based stats. Identities = 73/366 (19%), Positives = 167/366 (45%), Gaps = 16/366 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y ++ I ++ + + W+ Q+L+ + L + L + ++PT+ Sbjct: 1 MLLYRKYFIKNILPLLIVITFSMTSLVWITQVLKLLYLF-DKGIKVMDFLSLIILVLPTL 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + + ++ +L+I+ +G + L P L++A+++++ + + Sbjct: 60 LFILLPIITVITIIYIYNNLKIERQLIILQTSGVGNLQLALPALYVALIVALLAYYISST 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +K + + S +EE F ++ D+ + I K + N ++G+ I D+R+ Sbjct: 120 VMPLSHINLKSRLSFIKNNYISSMIEEKTFNKITKDITVYIDKKSTGNVMKGVIIFDNRN 179 Query: 181 TQTHKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--- 235 T + +A SG ++ + L+ G I+ +I+ + F S ++ ++ N Sbjct: 180 TDNPSVVFANSGILNIHENDPIFELSKGSRQEYD-INGNITQLTFDSLMIKLQNDNPLIS 238 Query: 236 --STIVLKANDQNLSFLLNPNPN-NPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 +T +AN+ + LL P + NP + +L+ +E H+R+ L+ + +++ Sbjct: 239 QRTTHNKEANEYYIEELLEPPVDLNPMKKIKLI----AEAHQRIIWPLYNFVLPFLALAV 294 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF-L 351 K ++ + +F +LS+ F + + +N +I YL +F I SI Sbjct: 295 FLKYPYSKKTTFMPILFAALSVLIATSAHF-TLQNFASKNLAFITACYLNIFFILSIGLY 353 Query: 352 LMIKKK 357 L I+K+ Sbjct: 354 LFIRKR 359 >gi|298506037|gb|ADI84760.1| membrane protein, YjgP-related [Geobacter sulfurreducens KN400] Length = 388 Score = 219 bits (557), Expect = 7e-55, Method: Composition-based stats. Identities = 58/343 (16%), Positives = 127/343 (37%), Gaps = 9/343 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI F + F+ + ++L+ +V + + ++ Y++P+ Sbjct: 3 RLLFRYICTETAVPFALGLTVFTFVLLMGRLLKLAEMVFARGVPFLDVTRLILYMLPSFF 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P F + + ++ ++E+ + +G S T+ PV+ ++ Sbjct: 63 LVAIPMAFLLAVLLAMGRLSADSEVTAMKASGMSIGTIAVPVIAFGVITYAATTFVSVYA 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRD 180 P + K+ + E +F L I + ++P + + GI I D R+ Sbjct: 123 LPWGNTAFKKFLHGVIETRAAMSITEKVFNDEFPGLVIYVDGFDPKSGRISGILIHDERN 182 Query: 181 TQTHKIYYAQSGSIDLDRQ----AIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 +A SG + + + + LN+G +HR + +++F SY L Sbjct: 183 PDEPSTIFAASGQLATNPEERIVRLRLNNGGIHRGI-GTGGYRLVEFTSYDLSIALQREQ 241 Query: 237 T-IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 L D L LL +P +P+L+ E HKR V+F +I++ + Sbjct: 242 QKARLNEEDMTLGELLAR-MKSPGEQPKLVREMHFELHKRFALPFACVVFAVIAVPLGIQ 300 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 + I L + + + +++ P ++ + Sbjct: 301 NQRSGRAGGFAAGIILLMLYYILMSAGKT-VNEKGIAPAFVAV 342 >gi|229587242|ref|YP_002845743.1| Putative permease [Rickettsia africae ESF-5] gi|228022292|gb|ACP54000.1| Putative permease [Rickettsia africae ESF-5] Length = 369 Score = 219 bits (557), Expect = 8e-55, Method: Composition-based stats. Identities = 65/365 (17%), Positives = 158/365 (43%), Gaps = 13/365 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y ++ I ++ + I W+ QIL+ + L + + ++PT+ Sbjct: 10 MLLYRKYFIKNILPLLIVVTFSVTSIVWITQILKLLYLF-DKGIKVMDFFSLIVLVLPTL 68 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + + ++ +L+I+ +G + + L P L++A+++ + + + Sbjct: 69 LFILLPVIMVITVIYIYNNLKVERQLIILQTSGVNNVQLALPALYVALIVMLLAYYISSN 128 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P +K + S +EE F ++ D+ + I K + N + G+ I D+R+ Sbjct: 129 ILPLSHINLKSRLNFIKNNYISSMIEEKTFNKVTKDITVFIDKKSAGNIMNGVIIFDNRN 188 Query: 181 TQTHKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--- 235 + +A SG+++ + LN G ++ +++ + F S ++ ++ N Sbjct: 189 ADNPSVVFAGSGTLNIYDNSPIFELNKGIRQEYD-VNGNLTQLTFDSLIIKLQNDNPLVS 247 Query: 236 --STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + +AN+ +S LL P P++ ++ +E H+R+ L+ + +++ Sbjct: 248 QRTKHNKEANEYYISELLAP-PHDLAITKKI--KLIAEAHQRIIWPLYNFVLPFVALAVF 304 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + ++ + +F +L++ F + + +N +I Y L +I L + Sbjct: 305 LRYPYSKKTTFMPVLFSALTVLLVTSIHF-ILQNFASKNLDFIFACYFNLVIALTIGLYL 363 Query: 354 IKKKY 358 +K Sbjct: 364 FVRKR 368 >gi|329850877|ref|ZP_08265722.1| hypothetical protein ABI_37960 [Asticcacaulis biprosthecum C19] gi|328841192|gb|EGF90763.1| hypothetical protein ABI_37960 [Asticcacaulis biprosthecum C19] Length = 385 Score = 218 bits (556), Expect = 9e-55, Method: Composition-based stats. Identities = 62/355 (17%), Positives = 137/355 (38%), Gaps = 12/355 (3%) Query: 12 IGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAM 71 + + + IA + Q L + LV +S ++++ +P + ++ P + Sbjct: 1 MIVPVAGAVAALTAIALISQSLTQFELVVERGQSAWTFIRVTLLSMPLLSGLIFPIALFV 60 Query: 72 ETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQ 131 T LT + E +G S + P++ + + +F S ++P ++++ Sbjct: 61 GTLVALTRLQGEHEFTAAFASGMSLRQVSSPIIRIGVYFLLFSLASNLFLQPWSARSMRE 120 Query: 132 LSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SRDTQTHKIYYAQ 190 K + L + ++E F L I + + + N+ L+ I+I + + + Y A+ Sbjct: 121 ELFKVKNDLVSTLVKEGEFSTSPSGLTIYVQRIDQNSLLRQIYIRIPATEGGADRTYVAR 180 Query: 191 SGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSSTIVLKANDQN 246 G I +IL +G S ++ + F ++ A+ ++ K +++ Sbjct: 181 EGKITQVGTESLLILRNGSTQWVS--GGELDHITFDETSIPISDYFASDDSLNFKESERY 238 Query: 247 LSFLLNPNPNNP----NYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 L L PN P NY + + +E H RL L+ + F L++I+A R Sbjct: 239 LHELFFPNLALPGDGGNYERKNVGKLMAEGHARLASPLYNLSFVLLAIMAVLGGGFSR-G 297 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I I+ ++ + + + YL + + ++ K+ Sbjct: 298 GYTQRIAIAAGVAVTARLLGVVMQTIGAEAAILNILQYLVPLIPIIMCVRLLNKR 352 >gi|157826432|ref|YP_001495496.1| putative permeases [Rickettsia bellii OSU 85-389] gi|157801736|gb|ABV78459.1| Putative permeases [Rickettsia bellii OSU 85-389] Length = 360 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 73/366 (19%), Positives = 167/366 (45%), Gaps = 16/366 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y ++ I ++ + + W+ Q+L+ + L + L + ++PT+ Sbjct: 1 MLLYRKYFIKNILPLLIVITFSMTSLVWITQVLKLLYLF-DKGIKVMDFLSLIILVLPTL 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + + ++ +L+I+ +G + L P L++A+++++ + + Sbjct: 60 LFILLPIITVITIIYIYNNLKIERQLIILQTSGVGNLQLALPALYVALIVALLAYYISST 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +K + + S +EE F ++ D+ + I K + N ++G+ I D+R+ Sbjct: 120 VMPLSHINLKSRLSFIKNNYISSMIEEKTFNKITKDITVYIDKKSTGNVMKGVIIFDNRN 179 Query: 181 TQTHKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--- 235 T + +A SG ++ + L+ G I+ +I+ + F S ++ ++ N Sbjct: 180 TDNPSVVFANSGILNIYENDPIFELSKGSRQEYD-INGNITQLTFDSLMIKLQNDNPLIS 238 Query: 236 --STIVLKANDQNLSFLLNPNPN-NPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 +T +AN+ + LL P + NP + +L+ +E H+R+ L+ + +++ Sbjct: 239 QRTTHNKEANEYYIEELLEPPVDLNPMKKIKLI----AEAHQRIIWPLYNFVLPFLALAV 294 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF-L 351 K ++ + +F +LS+ F + + +N +I YL +F I SI Sbjct: 295 FLKYPYSKKTTFMPILFAALSVLIATSAHF-TLQNFASKNLAFITACYLNIFFILSIGLY 353 Query: 352 LMIKKK 357 L I+K+ Sbjct: 354 LFIRKR 359 >gi|254418640|ref|ZP_05032364.1| putative permease, YjgP/YjgQ family [Brevundimonas sp. BAL3] gi|196184817|gb|EDX79793.1| putative permease, YjgP/YjgQ family [Brevundimonas sp. BAL3] Length = 397 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 67/360 (18%), Positives = 138/360 (38%), Gaps = 7/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+ R I + +C + I + Q L ++ ++ +S+ +++K++ +P + Sbjct: 20 MTLIQRYLFRQISLPVVAACASLAGIGILSQSLDQLEVIVERGQSVWVMVKLTLLALPQL 79 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + LT M R EL G +R +I P LA L+ I + Sbjct: 80 LAVILPIGLFVGALIALTRMQREQELTAAFAGGMTRWQVISPAARLAFLVLILNLVMTLF 139 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV--DS 178 +P + + + + L +EE F + D L + + + N L+ +F+ D Sbjct: 140 AQPWAQREARNQAFAIRTDLAALLVEEGQFVQGPDGLTVYVQQIEQNGLLKNLFVYLDDG 199 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT--ESANSS 236 + TQ A+ G + + + DG + S + + F Y S + Sbjct: 200 KSTQNWSAAEARFGRDAANEPVLTMIDGSWQKYS-SRGVLETLSFDRYDFPLGQFSGVTE 258 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 I K D L LL P+P +E H R+ L+ ++ +++ A Sbjct: 259 QIRYKPADLYLRQLLTPSPR-VLETAGSRGELLAEAHARIAAPLYALVAMAMALAAIMGG 317 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + R + + + V ++ NP+ + YL + + + ++ + Sbjct: 318 SFSRTGYSLRIAKAA-GVFLLVRVIGYGLVAASAWNPWMNILQYLAPLIVVAAAVRLLFR 376 >gi|42523904|ref|NP_969284.1| YjgP/YjgQ permease [Bdellovibrio bacteriovorus HD100] gi|39576111|emb|CAE80277.1| predicted permease YjgP/YjgQ family [Bdellovibrio bacteriovorus HD100] Length = 367 Score = 217 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 68/363 (18%), Positives = 146/363 (40%), Gaps = 17/363 (4%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 YI + SF++ L V I + Q+L+ ++ + +I GY+I ++LP++ Sbjct: 11 QYIFFEMLPSFILGLLVFVSIILMFQVLRLTEFALVHGVAMKTIAEIIGYVIISMLPILF 70 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P +++++E++ + +G TL+ P L LA L+ + I P Sbjct: 71 PMALLFSVLLTYGRLSQDSEIVAMKASGLPMGTLLLPALILATLVGVISAQMSFNIAPWG 130 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSRDTQTH 184 + L ++ + ++E F D+ I ++ N + L+ +FI D ++ Sbjct: 131 NRQFEVLYSRLANTKAAAIIKEGTFAEGFFDMVIYANEVNTDKGLLKKVFIYDEKNGDVP 190 Query: 185 KIYYAQSGSIDLDRQA------IILNDGEVHRKSPISKDISIMKFKSYTLQTESA-NSST 237 A++G I D + LN GE+HR++ IS F +Y ++ N Sbjct: 191 LTIIAKAGEIVPDPTRPGHEILLQLNQGEIHRQAKTHTKIS---FDTYDVRFSEPQNIEE 247 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 L + N + + E+ T +SE+HKR + ++F +I + Sbjct: 248 KAKSPPSLTLEEVRNRLKEDIKDK-EVRRTLQSEYHKRWAISVLCIVFAMIGV--GLGTT 304 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--FCISSIFLLMIK 355 R+ K + + + I +W ++ L ++ +++ + ++ Sbjct: 305 TNRRAAKAGGMILCIGI-IIFYWILYVAAEGAARSGALPAALAIWTPNVLFAALGVETLR 363 Query: 356 KKY 358 + + Sbjct: 364 RNW 366 >gi|84516313|ref|ZP_01003673.1| Predicted permease [Loktanella vestfoldensis SKA53] gi|84510009|gb|EAQ06466.1| Predicted permease [Loktanella vestfoldensis SKA53] Length = 369 Score = 215 bits (549), Expect = 6e-54, Method: Composition-based stats. Identities = 51/351 (14%), Positives = 131/351 (37%), Gaps = 5/351 (1%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 +L + L +V + + + + + + + +S + ++ + +P+V+ + P Sbjct: 1 MLSQLIMLCGFFGLVLVLVYSINRAVLLFDQLIADGQSAGVFVEFTALTLPSVIRLALPL 60 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 V M ++EL+++ TG S + +PVL+ +++++ + + + + P+ + Sbjct: 61 AAFAAAIYVTNRMTNDSELVVVQATGYSLFRIARPVLYFGLIVALLMSLLMHFLVPRSAA 120 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 + + +T L F + I +P+ L +F+ D+R + Y Sbjct: 121 QLALRQTEIARNVTARLLTPGTFTEPIAGVTFYIRDLSPDGELFDLFLSDTRGIEDQVTY 180 Query: 188 YAQSGSIDLD--RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSSTIVLKAN 243 A + + +++ DG V + + +F ++ A + +A+ Sbjct: 181 TASRAFLVREAQETQLVMIDGMVQTLRLADQRLFTTRFAEFSYNVGGLLAPVTQAGRRAS 240 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 + LL+P P ++ H R +Q L ++ LI + R Sbjct: 241 HLSTWELLHPTPALVAETGSSAARMIADGHDRFSQSLLGMVAALIGFATLMVGSYSR-FG 299 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 I ++++ V + ++ + + YL I ++ Sbjct: 300 VWRQIVAAIALIVVVKALETAGLNAARADAQLWFLTYLPGAGGLVIVWCLL 350 >gi|85706342|ref|ZP_01037436.1| Predicted permease [Roseovarius sp. 217] gi|85669115|gb|EAQ23982.1| Predicted permease [Roseovarius sp. 217] Length = 374 Score = 215 bits (549), Expect = 6e-54, Method: Composition-based stats. Identities = 52/331 (15%), Positives = 119/331 (35%), Gaps = 5/331 (1%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 +L F L +V I W+ + ++ + + + + ++ + +P V+ +V P Sbjct: 1 MLSQFMVLFGFFALVLVSIVWINKAVRMFDRLIGDGQPAWVFVEFTALTLPGVIGVVLPI 60 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 V+ ++ +EL ++ TG S + L +PVL +++++ + + + + P S Sbjct: 61 AAFAAAVYVVNRLSSESELTVMQATGYSPLRLARPVLVFGVIVAVMMSLLAHYLIPGSLS 120 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 ++ + ++ L + F + I + L+ +F+ D RD + Y Sbjct: 121 QLRLRQDEVSRNISAKLLSDGEFLHPAPGITFYIREITQTGELRDVFLSDRRDPEAPVTY 180 Query: 188 YAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV--LKAN 243 + + +++ G + F ++ S S +V + Sbjct: 181 TSSRAYLVQEGGGTRLVMVSGLAQNIRADQNRLFTTYFDDFSYDISSLVSRDVVNLDEVA 240 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 N +L T S+ H R+T L VI L+ A R Sbjct: 241 FANTLEMLRDPEAVAARTGTSYGTVMSQTHGRITAALLCVIAALVGFCTLLVGAHSR-FG 299 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPY 334 + ++ + G+ S ++ + N Sbjct: 300 VWRQVLLAFGLLVGIKIVESIVVAPVLLNGA 330 >gi|157965014|ref|YP_001499838.1| putative permease [Rickettsia massiliae MTU5] gi|157844790|gb|ABV85291.1| Putative permease [Rickettsia massiliae MTU5] Length = 370 Score = 215 bits (549), Expect = 6e-54, Method: Composition-based stats. Identities = 64/363 (17%), Positives = 155/363 (42%), Gaps = 13/363 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y ++ I ++ + I W+ QIL+ + L + + ++PT+L Sbjct: 13 LYRKYFIKNILPLLIVVTFSVTSIVWITQILKLLYLF-DKGIKVMDFFSLIVLVLPTLLF 71 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + ++ +L+I+ +G + L P L++A+++ + + + I Sbjct: 72 ILLPVITVITVIYIYNNLKVERQLIILQASGVDNVQLALPALYVALIVMLLAYYISSTIL 131 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +K + S +EE F ++ D+ + I K + N + G+ I D+R+ Sbjct: 132 PLSHINLKSRLNFIKNNYISSMIEEKTFNKVTKDITVFIDKKSAGNIMNGVIIFDNRNAD 191 Query: 183 THKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS----- 235 + +A SG+++ + LN G ++ +++ + F S ++ ++ N Sbjct: 192 NPSVVFAGSGTLNIYDNSPIFELNKGRRQEYD-VNGNLTQLTFDSLMIKLQNDNPLVSQR 250 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + +AN+ +S LL P P++ ++ +E H+R+ L+ + +++ + Sbjct: 251 TKHNKEANEYYISELLAP-PHDLAITKKI--KLIAEAHQRIIWPLYNFVLPFVTLAVFLR 307 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 ++ + +F +L + F + + +N +I Y L +I L + Sbjct: 308 YPYSKKTTFMPVLFSALIVLLVTSIHF-ILQNFASKNLDFIFACYFNLVIALTIGLYLFV 366 Query: 356 KKY 358 +K Sbjct: 367 RKR 369 >gi|302342716|ref|YP_003807245.1| permease YjgP/YjgQ family protein [Desulfarculus baarsii DSM 2075] gi|301639329|gb|ADK84651.1| permease YjgP/YjgQ family protein [Desulfarculus baarsii DSM 2075] Length = 397 Score = 215 bits (548), Expect = 7e-54, Method: Composition-based stats. Identities = 66/364 (18%), Positives = 133/364 (36%), Gaps = 15/364 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y+LR + F +S F+ + +I++ +LV S L+++ ++ Y +P Sbjct: 5 RIIHRYLLREMIGPFFISLGVFTFMLLIAKIMELTDLVVSRGVGLDVVGRLLLYTLPYFF 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + M+ + E++ + G S + PV LAI + Sbjct: 65 VFTIPMATLLGVLLAFLRMSGDMEVVALKAAGVSPYAFLPPVAVLAICAWLVTSALAFWG 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + L + A T L+E +F + I IS+ + +FIVD R+ Sbjct: 125 LPWGNHRFENLVFQVAKAQTDLALKERVFMDTFPGMVIYISRLPGQGQMTDLFIVDEREK 184 Query: 182 QTHKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 H A+ G I + DR + L DG +H + F +Y + +++ S Sbjct: 185 GRHHTIVAKRGKIFPANNDRLILRLYDGTIHSVGQNLRSAQTAAFVTYDIAVDASTLSAA 244 Query: 239 VLK----ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + + LL P + E HK+ + ++ LI + Sbjct: 245 HQRTTKHEKEMYFGELLAEMDKLPADSMQHY-LIEMEMHKKFSVPFACLVMALIGLPLGM 303 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI--LYLFLFCISSIFLL 352 + + + I+L + G + S + Y PI ++ + ++ + Sbjct: 304 HS----RGGRSWGVAIALVVFLGYYLMLS-AAWSFGKTGDYPPIVGMWAPNLLLGALAVE 358 Query: 353 MIKK 356 + ++ Sbjct: 359 LFRR 362 >gi|253702060|ref|YP_003023249.1| permease YjgP/YjgQ family protein [Geobacter sp. M21] gi|251776910|gb|ACT19491.1| permease YjgP/YjgQ family protein [Geobacter sp. M21] Length = 391 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 66/366 (18%), Positives = 139/366 (37%), Gaps = 17/366 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K+ YI + I FL+ + F+ + + L+ +V + + ++ YL+P Sbjct: 7 KTLYAYIFKEIPTPFLVGMVTFTFVLLMGRFLKLAEMVVEKGVPFSDVARMVAYLLPPFW 66 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + ++ ++E+ + + G S L+ P L A ++ Sbjct: 67 LFTIPMALLLAMLLAFGRLSGDSEITAMKSCGISLYGLLPPPLLFAACATLACLFVTVYA 126 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSRD 180 P S K+L + + ++E +F D+ + + T+ G+ + D RD Sbjct: 127 VPWGNSGFKKLVVEIAQSSAGISIKEKIFNNAFPDMVVYTQSLDTKAQTMGGVIVHDERD 186 Query: 181 TQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 +T +A +G++ D ++ L +G +HR +++F+ Y L+ A Sbjct: 187 PRTPTTIFASTGALVSDPKSNSMEFQLRNGSIHRAE-EKGGYRMVQFQEYNLRVSLAEGG 245 Query: 237 TI-VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 K ++ L LL+P + + + + E+H RL +F L++I Sbjct: 246 NKSPRKVSEMTLDELLHPPK---GAQQKEILSRGLEYHGRLALPFSCFVFTLLAI---PL 299 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF---LFCISSIFLL 352 R+ K +S+ + + S E+ P+L + L + + L Sbjct: 300 GIQNRRSGKASGFSLSIGVILLYYVALSAFKTLGER-GMLPPLLAGWSPNLIFLMAGIYL 358 Query: 353 MIKKKY 358 K + Sbjct: 359 FKKTAH 364 >gi|118580061|ref|YP_901311.1| permease YjgP/YjgQ family protein [Pelobacter propionicus DSM 2379] gi|118502771|gb|ABK99253.1| permease YjgP/YjgQ family protein [Pelobacter propionicus DSM 2379] Length = 382 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 59/360 (16%), Positives = 145/360 (40%), Gaps = 10/360 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 ++ L I+R I FL+ + + ++++ +V S +L + ++ L+P+ L Sbjct: 3 RTLYLSIIREITSLFLLGLGIFTLVLLMGRMIKLTEMVISRGVALADMGRMIICLMPSFL 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P F + ++ ++E+ ++ G S + ++ PVL A++ + + + Sbjct: 63 VYTIPMAFLLAVLLTFGRLSADSEITVMKACGISLVQIMPPVLLCALVAATLGLYAGVVG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSRD 180 P +S S + E +F+ + + Y+ +TL G+ I D R+ Sbjct: 123 VPWGNRAFAAMSFDMLSQNVSSTIREKVFWDDIPGIVLYTDHYDEERHTLSGVVINDERN 182 Query: 181 TQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 +A SG + +IL G +H + + ++ F Y + + + Sbjct: 183 ASRPLTIFASSGLVAGGANPRDVRLILRSGSIHAQGRG-GEYRLIHFAEYVMNIAAPGGT 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V +A + L+ + +P+ +P+L + +E H R ++F ++++ Sbjct: 242 DTVTRAPREMTVTELHRSIASPSTQPKLRKKMATEMHSRFALPFASLVFAVLAV---PLG 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFLLMIK 355 R+ + IS+ + + S + E+ + P+ L++ + ++++ Sbjct: 299 LQNRRSARSFGFAISIGVLLAYYILLSLLGTMAEKGSFPAPLALWIPNMVFLVLGWVLLR 358 >gi|77919518|ref|YP_357333.1| hypothetical protein Pcar_1922 [Pelobacter carbinolicus DSM 2380] gi|77545601|gb|ABA89163.1| conserved hypothetical membrane protein [Pelobacter carbinolicus DSM 2380] Length = 418 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 67/367 (18%), Positives = 138/367 (37%), Gaps = 15/367 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y+LR L+ + + +IL + LV + L +L + YL+PT L Sbjct: 32 RIQRYLLRETLVPMLLGLAVFTLVLLLGRILNLVELVINKGVPLVDVLLLLAYLLPTFLV 91 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P F + M+ + E+L + G L P++ L +L+S+ + I+ Sbjct: 92 LTLPLSFLLGVMAGFGRMSADREILALKACGVGLRQLTAPIVGLGLLVSLATAATTIAIK 151 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDT 181 P ++ + ++ +F + + + + + + +QG+FI D RD Sbjct: 152 PASEDLFREKLFHIASSRANIGIQAQIFNDEFEGIILYANDVDERSGRMQGVFISDERDD 211 Query: 182 QTHKIYYAQSGSIDLDRQ----AIILNDGEVHRKSPISKD-ISIMKFKSYTLQTESANSS 236 I A G I +++ + L +G +HR+ + +++F Y L + +S Sbjct: 212 TLSSIILANEGRIFSNQENLTLTLHLENGTIHRQRRETGSGFQVIEFTRYDLNLDLGQTS 271 Query: 237 TIVLKAND----QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + L L + P +EFH RL + P++F L+ + Sbjct: 272 MSADQPRKNKKTMTLGELYQAIRPDAATPPSKKRELLAEFHWRLAVPVIPLLFALLGVPL 331 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF--LFCISSIF 350 + + + L + + S + I++ +F ++SI Sbjct: 332 GIQPV---RSGRGSGFAAGLLVFLAYYVLLSLAGTLVVDAGLPGLIMWGPNSIFLLASIV 388 Query: 351 LLMIKKK 357 +L K Sbjct: 389 VLRAAAK 395 >gi|95928709|ref|ZP_01311455.1| permease YjgP/YjgQ [Desulfuromonas acetoxidans DSM 684] gi|95135054|gb|EAT16707.1| permease YjgP/YjgQ [Desulfuromonas acetoxidans DSM 684] Length = 395 Score = 212 bits (539), Expect = 9e-53, Method: Composition-based stats. Identities = 80/366 (21%), Positives = 151/366 (41%), Gaps = 18/366 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + YI R I FL+S + F+ + ++L+ I +V +++ +L + L+P+ Sbjct: 5 RLQTYISREIIAPFLLSLVLFTFVLLLSRLLKLIEMVVDKGVAVSEILHLFACLLPSFFV 64 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P F + ++ ++E++ + G S L +PVL +A+L+ F + E Sbjct: 65 ITVPLSFLLAVMLAFGRLSADSEIVAMKAAGFSLYRLSQPVLIIALLVCGFTAYLTLVAE 124 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSRDT 181 P R +KQ + L+ +F D L + + + NT+ G+FI D R Sbjct: 125 PAGRVKLKQRLIDIAYSKAAVALQPQIFNEEFDGLMMYANDVDNQTNTMTGVFISDERMG 184 Query: 182 QTHKIYYAQSGSIDLDRQA----IILNDGEVHR--KSPISKDISIMKFKSYT----LQTE 231 T I AQ G I DR + L DG +HR + ++ F+SY L T Sbjct: 185 NTPSIIVAQRGEIRSDRTNGSLLMHLRDGSIHRPVIRSGKRSYQVVDFQSYDVNLSLNTA 244 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 ++ LK + L+ +P E R E +RL P+IF L+++ Sbjct: 245 DKEEKSLNLKPKEMTTKALMQADPE---LSEEKQRERRVELMERLVLPFSPLIFALLAVP 301 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIF 350 + + K ++L I + S +++N + + L+ + Sbjct: 302 LGIR---SHRSPKGGGFSVALFIFLLYYLCLSVAKTMVQENNWPLLGSLWGPSVAFIVVG 358 Query: 351 LLMIKK 356 +L++ + Sbjct: 359 ILLLIR 364 >gi|67459766|ref|YP_247390.1| permease [Rickettsia felis URRWXCal2] gi|67005299|gb|AAY62225.1| Predicted permeases [Rickettsia felis URRWXCal2] Length = 369 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 65/365 (17%), Positives = 157/365 (43%), Gaps = 13/365 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y ++ I ++ + I W+ QIL+ + L + + ++PT+ Sbjct: 10 MLLYRKYFIKNILPLLIVVTFSVTSIVWITQILKLLYLF-DKGIKVMDFFSLIVLVLPTL 68 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + + ++ +L+I+ +G + + L P L+ A+++ + + + Sbjct: 69 LFILLPVITVIAVIYIYNNLKVERQLIILQASGVNNVQLALPALYAALIVMLLAYYISST 128 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P +K + S +EE F ++ D+ + I K + N + G+ I D+R+ Sbjct: 129 ILPLSHINLKSRLNFIKNNYISSMIEEKTFNKVTKDITVFIDKKSAGNIMNGVIIFDNRN 188 Query: 181 TQTHKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--- 235 + +A SG+++ + LN G ++ +++ + F S ++ ++ N Sbjct: 189 ADNPSVVFAGSGTLNIYDNNPIFELNKGIRQEYD-VNGNLTQLTFDSLMIKLQNDNPLVS 247 Query: 236 --STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + +AN+ +S LL P P++ ++ +E H+R+ L+ + +++ Sbjct: 248 QRTKHNKEANEYYISELLAP-PHDLAITKKI--KLIAEAHQRIIWPLYNFVLPFLALAVF 304 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + ++ + +F +L++ F + + +N +I Y L +I L + Sbjct: 305 LRYPYSKKTTFMPVLFSALTVLLVTSIHF-ILQNFASKNLDFIFACYSNLIIALTIGLYL 363 Query: 354 IKKKY 358 +K Sbjct: 364 FVRKR 368 >gi|85859086|ref|YP_461288.1| permease [Syntrophus aciditrophicus SB] gi|85722177|gb|ABC77120.1| permease [Syntrophus aciditrophicus SB] Length = 394 Score = 209 bits (533), Expect = 4e-52, Method: Composition-based stats. Identities = 60/366 (16%), Positives = 146/366 (39%), Gaps = 10/366 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+++ I + F + + F+ + +ILQ ++L+ + L+ + ++ +L+P+ Sbjct: 1 MKIINRYLVKEILQPFGIVLFVLTFVLLMGKILQLMDLMINKGVGLSHIARLILFLLPSF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + L ++ + EL ++ +G S L P+L +A++ + + Sbjct: 61 LVFTLPISLLVSVLIALGRLSSDNELTVLKASGISLYRLTPPILMIALVSFMLTAATTLF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSR 179 + P + K L ++E +F + + + K + ++G+ + D R Sbjct: 121 LVPYSNTATKALIFNVARNKASIGIKEKVFNADFNGVVLYAEKVPSDGRFMEGVLVSDQR 180 Query: 180 DTQTHKIYYAQSGSIDLDRQ----AIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 A+ + D + + L DG + + K M FK+Y + + +S Sbjct: 181 TADEPGTIIAKKAFLVADPKSMTVTLRLEDGSTYFVAENMKIFRKMDFKTYDINLDLQSS 240 Query: 236 STIVLKANDQNLSFL----LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S+ K + L + L N + ++ E +++ + L ++F +++I Sbjct: 241 SSDAEKMRTKALKEMTPRELIQNLKSGRLDDKIYRKTAMELYEKFSIPLSCLVFSILAIP 300 Query: 292 AADKRAL-VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 K + + +++ + + + G ++ +P+ + LF I+ Sbjct: 301 LGVKPHHRSVKSRGFTIGLMTVLLYYLLQLGCEGMVTVGRLSPFLGSWIPNILFTIAGTV 360 Query: 351 LLMIKK 356 L + Sbjct: 361 LYFMAA 366 >gi|148261611|ref|YP_001235738.1| permease YjgP/YjgQ family protein [Acidiphilium cryptum JF-5] gi|146403292|gb|ABQ31819.1| permease YjgP/YjgQ family protein [Acidiphilium cryptum JF-5] Length = 386 Score = 209 bits (532), Expect = 6e-52, Method: Composition-based stats. Identities = 61/352 (17%), Positives = 141/352 (40%), Gaps = 7/352 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y+ R + +S L +V + W+ Q L+ I L+ S + L ++G L+P+ + Sbjct: 20 TRLDRYVFRQLLIGLAVSTLGLVALVWLTQSLRFIQLIIQHGLSPVVFLHLTGLLVPSFV 79 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 ++ P + V + + EL ++ +G S + +P L LA+L + + + Sbjct: 80 AVILPITCFIVILFVYARLAADRELTVMRASGMSDAAIARPALALAMLTMLACWGLNVWL 139 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + + + LE +F + + + + + + + L GI I D+R Sbjct: 140 VPSTLARFTHFESIIRNQVAAFLLEPGVFTPIPGHITVYVQRRDHDQVLHGIVIQDARQK 199 Query: 182 QTHKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 A+SG + D ++L DG + P + ++I+ F+ + T Sbjct: 200 GEPATILARSGRLIDGPDGPEVLLLDGSREQVDPKTGRLNILSFRRNLISLAKPTGVTRK 259 Query: 240 L--KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 L K ++ ++ L + + P + +R E +R+ + + +I++++ + Sbjct: 260 LAPKTSEATMTQLFHAGAA--HVPPPVQRRWREEAWRRIASPFAVLSYAVIALLSVLRSP 317 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 RQ + I G+ + + IP+++ + + Sbjct: 318 FRRQGGAAALVAAVF-IVMGLVALELGTENLAARQNGLIPLIFAVTLGPALV 368 >gi|326405101|ref|YP_004285183.1| permease YjgP/YjgQ family protein [Acidiphilium multivorum AIU301] gi|325051963|dbj|BAJ82301.1| permease YjgP/YjgQ family protein [Acidiphilium multivorum AIU301] Length = 374 Score = 209 bits (531), Expect = 8e-52, Method: Composition-based stats. Identities = 61/352 (17%), Positives = 141/352 (40%), Gaps = 7/352 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y+ R + +S L +V + W+ Q L+ I L+ S + L ++G L+P+ + Sbjct: 8 TRLDRYVFRQLLIGLAVSTLGLVALVWLTQSLRFIQLIIQHGLSPVVFLHLTGLLVPSFV 67 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 ++ P + V + + EL ++ +G S + +P L LA+L + + + Sbjct: 68 AVILPITCFIVILFVYARLAADRELTVMRASGMSDAAIARPALALAMLTMLACWGLNVWL 127 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + + + LE +F + + + + + + + L GI I D+R Sbjct: 128 VPSTLARFTHFESIIRNQVAAFLLEPGVFTPIPGHITVYVQRRDHDQVLHGIVIQDARQK 187 Query: 182 QTHKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 A+SG + D ++L DG + P + ++I+ F+ + T Sbjct: 188 GEPATILARSGRLIDGPDGPEVLLLDGSREQVDPKTGRLNILSFRRNLISLAKPTGVTRK 247 Query: 240 L--KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 L K ++ ++ L + + P + +R E +R+ + + +I++++ + Sbjct: 248 LAPKTSEATMTQLFHAGAA--HVPPPVQRRWREEAWRRIASPFAVLSYAVIALLSVLRSP 305 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 RQ + I G+ + + IP+++ + + Sbjct: 306 FRRQGGAAALVAAVF-IVMGLVALELGTENLAARQNGLIPLIFAVTLGPALV 356 >gi|114799726|ref|YP_760969.1| putative permease [Hyphomonas neptunium ATCC 15444] gi|114739900|gb|ABI78025.1| putative permease [Hyphomonas neptunium ATCC 15444] Length = 380 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 65/365 (17%), Positives = 150/365 (41%), Gaps = 8/365 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M +L++LR + ++ L+ +V +A + Q L R +++ + +S I P V Sbjct: 1 MTKIQLHLLRQVLQAVLIIVGSLVMVALLAQGLSRTDVILENRQSAITYFYIVMLGSPQV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + L +++++E+++ G +R + PVL LA++ + Sbjct: 61 IALLLPLALFVAGVWSLNRIHKDSEIVVAQAAGMTRWQVASPVLRLAMVCLVVHLGVNLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 ++P + +++ A+A+ L + F + L L+G+ I D D Sbjct: 121 VQPMSQRAMREAVAEARADLAAALFRAGQFTSNGERLTFYARD-QVGGELRGVLISDMTD 179 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 + A+S ++ + ++L D + ++ +S+++F Y S Sbjct: 180 PEFPMDILARSAALVSVDGQPTLLLRDALSQQLD-ENQQLSVLEFDQYMFDLSDFMKEDS 238 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 +VLKA+D+ L L+ + N + + +++ +E + RLT + ++ L++I A Sbjct: 239 ELVLKASDKFLHELIFLDRKN-YFENKEADSFLAEANARLTSPMLNIVMALLAIFAVLGG 297 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 RQ + F + + + +P L++ I + Sbjct: 298 DFSRQGYAKRIGLATGGAIFVLVLHLA-LQSAAADDPALNIALWVVPILAGIILGWIYFG 356 Query: 357 KYTKI 361 + +I Sbjct: 357 RGARI 361 >gi|292572537|gb|ADE30452.1| Putative permease [Rickettsia prowazekii Rp22] Length = 377 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 65/365 (17%), Positives = 154/365 (42%), Gaps = 13/365 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y ++ I ++ + I W+ QIL+ + L + + ++PT+ Sbjct: 18 MLLYRKYFIKNILPLLIIVTFSVTSIVWITQILKLLYLF-DKGIKVIDFFNLVVLVLPTL 76 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + + ++ +L+I+ +G + I L P L++A+ + + + + Sbjct: 77 LFILLPIITVIAVLYIYNNLKVERQLIILQTSGVNNIQLALPALYVALTIMLLAYYISST 136 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P +K + S +EE F ++ ++ + I K N + GI I D+R+ Sbjct: 137 ILPLSHINLKSRLNFIKNNYISSMIEEKTFNKITKNITVFIDKKLTGNIMNGIIIFDNRN 196 Query: 181 TQTHKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE-----SA 233 + +A SG+++ + LN G + +++ + F S ++ + ++ Sbjct: 197 ADNPSVVFAGSGTLNIYGNNPIFELNKGLRQEYD-ANGNLTQLTFDSLMIKLQNNSSLTS 255 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + +AN+ +S LL P+ + + +E H+R+ L+ + +++ Sbjct: 256 QRTQNNKEANEYYISELLTPSHDLVITKKI---KLIAEAHQRIIWPLYNFVLPCLALAVF 312 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + ++ + +F +L++ F F + + +N +I Y L +I L + Sbjct: 313 LRYPYSKKTTFMPVLFSALTVLFVTAIHF-ILQNFASKNLDFIFACYFNLLVALTIGLYL 371 Query: 354 IKKKY 358 + K Sbjct: 372 LVHKR 376 >gi|157829182|ref|YP_001495424.1| hypothetical protein A1G_07385 [Rickettsia rickettsii str. 'Sheila Smith'] gi|157801663|gb|ABV76916.1| hypothetical protein A1G_07385 [Rickettsia rickettsii str. 'Sheila Smith'] Length = 338 Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats. Identities = 62/343 (18%), Positives = 150/343 (43%), Gaps = 13/343 (3%) Query: 23 IVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNR 82 + I W+ QIL+ + L + + ++PT+L ++ P + + ++ Sbjct: 1 MTSIVWITQILKLLYLF-DKGIKVMDFFSLIVLVLPTLLFILLPVIMVITVIYIYNNLKV 59 Query: 83 NTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTF 142 +L+I+ +G + + L P L++A+++ + + + I P +K + Sbjct: 60 ERQLIILQASGVNNVQLALPALYVALIVMLLAYYISSTILPLSHINLKSRLNFIKNNYIS 119 Query: 143 SYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSID--LDRQA 200 S +EE F ++ D+ + I K + N + G+ I D+R+ + +A SG+++ + Sbjct: 120 SMIEEKTFNKVTKDITVFIDKKSAGNIMNGVIIFDNRNADNPSVVFAGSGTLNIYDNSPI 179 Query: 201 IILNDGEVHRKSPISKDISIMKFKSYTLQTESANS-----STIVLKANDQNLSFLLNPNP 255 LN G ++ +++ + F S ++ ++ N + +AN+ +S LL P P Sbjct: 180 FELNKGIRQEYD-VNGNLTQLTFDSLMIKLQNDNPLVSQRTKHNKEANEYYISELLAP-P 237 Query: 256 NNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSIS 315 ++ ++ +E H+R+ L+ + +++ + ++ + +F +L++ Sbjct: 238 HDLAITKKI--KLIAEAHQRIIWPLYNFVLPFVALAVFLRYPYSKKTTFMPVLFSALTVL 295 Query: 316 FGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 F + + +N +I Y L +I L + +K Sbjct: 296 LVTSIHF-ILQNFASKNLDFIFACYFNLVIALTIGLYLFVRKR 337 >gi|15604701|ref|NP_221219.1| hypothetical protein RP871 [Rickettsia prowazekii str. Madrid E] gi|6831726|sp|Q9ZC95|Y871_RICPR RecName: Full=Uncharacterized protein RP871 gi|3861396|emb|CAA15295.1| unknown [Rickettsia prowazekii] Length = 360 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 65/365 (17%), Positives = 154/365 (42%), Gaps = 13/365 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y ++ I ++ + I W+ QIL+ + L + + ++PT+ Sbjct: 1 MLLYRKYFIKNILPLLIIVTFSVTSIVWITQILKLLYLF-DKGIKVIDFFNLVVLVLPTL 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + + ++ +L+I+ +G + I L P L++A+ + + + + Sbjct: 60 LFILLPIITVIAVLYIYNNLKVERQLIILQTSGVNNIQLALPALYVALTIMLLAYYISST 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P +K + S +EE F ++ ++ + I K N + GI I D+R+ Sbjct: 120 ILPLSHINLKSRLNFIKNNYISSMIEEKTFNKITKNITVFIDKKLTGNIMNGIIIFDNRN 179 Query: 181 TQTHKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE-----SA 233 + +A SG+++ + LN G + +++ + F S ++ + ++ Sbjct: 180 ADNPSVVFAGSGTLNIYGNNPIFELNKGLRQEYD-ANGNLTQLTFDSLMIKLQNNSSLTS 238 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + +AN+ +S LL P+ + + +E H+R+ L+ + +++ Sbjct: 239 QRTQNNKEANEYYISELLTPSHDLVITKKI---KLIAEAHQRIIWPLYNFVLPCLALAVF 295 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + ++ + +F +L++ F F + + +N +I Y L +I L + Sbjct: 296 LRYPYSKKTTFMPVLFSALTVLFVTAIHF-ILQNFASKNLDFIFACYFNLLVALTIGLYL 354 Query: 354 IKKKY 358 + K Sbjct: 355 LVHKR 359 >gi|34581065|ref|ZP_00142545.1| hypothetical protein [Rickettsia sibirica 246] gi|28262450|gb|EAA25954.1| unknown [Rickettsia sibirica 246] Length = 338 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 62/343 (18%), Positives = 150/343 (43%), Gaps = 13/343 (3%) Query: 23 IVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNR 82 + I W+ QIL+ + L + + ++PT+L ++ P + + ++ Sbjct: 1 MTSIVWITQILKLLYLF-DKGIKVMDFFSLIVLVLPTLLFILLPVIMVITVIYIYNNLKV 59 Query: 83 NTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTF 142 +L+I+ +G + + L P L++A+++ + + + I P +K + Sbjct: 60 ERQLIILQTSGVNNVQLALPALYVALIVMLLAYYISSNILPLSHINLKSRLNFIKNNYIS 119 Query: 143 SYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSID--LDRQA 200 S +EE F ++ D+ + I K + N + G+ I D+R+ + +A SG+++ + Sbjct: 120 SMIEEKTFNKVTKDITVFIDKKSAGNIMNGVIIFDNRNADNPSVVFAGSGTLNIYDNSPI 179 Query: 201 IILNDGEVHRKSPISKDISIMKFKSYTLQTESANS-----STIVLKANDQNLSFLLNPNP 255 LN G ++ +++ + F S ++ ++ N + +AN+ +S LL P P Sbjct: 180 FELNKGIRQEYD-VNGNLTQLTFDSLMIKLQNDNPLVSQRTKHNKEANEYYISELLAP-P 237 Query: 256 NNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSIS 315 ++ ++ +E H+R+ L+ + +++ + ++ + +F +L++ Sbjct: 238 HDLAITKKI--KLIAEAHQRIIWPLYNFVLPFVALAVFLRYPYRKKTTFMPVLFSALTVL 295 Query: 316 FGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 F + + +N +I Y L +I L + +K Sbjct: 296 LVTSIHF-ILQNFASKNLDFIFACYFNLVIALTIGLYLFVRKR 337 >gi|51474040|ref|YP_067797.1| hypothetical protein RT0862 [Rickettsia typhi str. Wilmington] gi|51460352|gb|AAU04315.1| conserved hypothetical protein (possible transmembrane protein) [Rickettsia typhi str. Wilmington] Length = 360 Score = 202 bits (515), Expect = 5e-50, Method: Composition-based stats. Identities = 66/365 (18%), Positives = 156/365 (42%), Gaps = 13/365 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y ++ I ++ + I W+ QIL+ + L + + ++P + Sbjct: 1 MLLYRKYFIKNILPLLIIVTFSVTSIVWITQILKLLYLF-DKGIKVIDFFNLVVLVLPIL 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + + ++ +L+I+ +G + I L P L++A+ + +F + + Sbjct: 60 LFILLPVITVISVLYIYNNLKVERQLIILQASGVNNIQLALPALYVALTVMLFAYYISST 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P +K + + S +EE F ++ ++ + I K N + GI I D+R+ Sbjct: 120 ILPLSHINLKSRLSFIKNNYISSMIEEKTFNKITKNITVFIDKKLAGNIMNGIIIFDNRN 179 Query: 181 TQTHKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE-----SA 233 I +A SG+++ + LN G ++ +++ + F S ++ + ++ Sbjct: 180 ADKPSIVFAGSGTLNIHGNNPIFELNKGLRQEYD-VNGNLTQLTFDSLMIKLQNDSSLAS 238 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + +AN+ +S LL P+ + + +E H+R+ L+ + +++ Sbjct: 239 QRTQHNKEANEYYISELLTPSHDLVITKKI---KLIAEAHQRIIWPLYNFVLPCLALAVF 295 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + ++ I +F +L++ F + + +N +I Y L +I L + Sbjct: 296 LRYPYSKKTTFIPVLFSALTVLLVTAIHF-ILQNFASKNLDFIFACYFNLLVALTIGLYL 354 Query: 354 IKKKY 358 + +K Sbjct: 355 LVRKR 359 >gi|158521442|ref|YP_001529312.1| permease YjgP/YjgQ family protein [Desulfococcus oleovorans Hxd3] gi|158510268|gb|ABW67235.1| permease YjgP/YjgQ family protein [Desulfococcus oleovorans Hxd3] Length = 391 Score = 202 bits (514), Expect = 7e-50, Method: Composition-based stats. Identities = 62/361 (17%), Positives = 140/361 (38%), Gaps = 16/361 (4%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI+ + F +S + Q+L N + + L +++ + Y P L Sbjct: 6 IDRYIMAELVPVFGVSLAVFTLVFLTHQLLDITNFIVNYGTGLGVVMLMLVYSTPYFLVY 65 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 V P M M+ + E++ + ++G S L PV+ + + + P Sbjct: 66 VIPISTMMAVLLTFLRMSGDNEIVALKSSGVSLYRLFYPVMGFCVAACLLTLLMTLWGLP 125 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSRDTQ 182 + + KQL+ + + + F L + + + + +++ L +FI D R Sbjct: 126 RGKVAFKQLAYTVVTSNPNLGIVDREFNTLFNGITLYVGQFDKKQRVLSDVFIEDQRSAG 185 Query: 183 THKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESAN---- 234 A SG++D+D + L DG +++ + +++F++Y + + Sbjct: 186 KPVTICAPSGTLDVDMVGQVVRLSLADGRMYQVDLRDRSSRVIRFETYDIHLDLERAGQV 245 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 +ST + +L+ L + + R E HK+ + V+ + ++A Sbjct: 246 ASTAARSEKEMSLAELFDH-IQKAGAAGLPRGSARMELHKKFSIPFACVV---LGLLAVP 301 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--FCISSIFLL 352 R RK I ++L F +++ + ++ + P L ++L + + L Sbjct: 302 LGVQARGRKTSSGIGLALVF-FLLYYLVLSGGEILGESGFLHPALAMWLPDMVMGGLGLF 360 Query: 353 M 353 + Sbjct: 361 L 361 >gi|258591111|emb|CBE67406.1| putative Permease YjgP/YjgQ family protein [NC10 bacterium 'Dutch sediment'] Length = 426 Score = 202 bits (514), Expect = 8e-50, Method: Composition-based stats. Identities = 61/372 (16%), Positives = 145/372 (38%), Gaps = 23/372 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + ++LR + SF + F+ + Q+++ ++L+ + + ++L++ Y++P Sbjct: 32 LIDRHLLREMAASFALGLGTFTFVLLMDQMMRLMDLIINKGAPVGVVLRLISYILPFSFT 91 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + ++ E +++ +G S L+ P + ++ + +++ Sbjct: 92 VTIPMSVLLAVLATYGRVSSEGEAIVLKTSGLSLYRLMAPGVLFGVVATFATLWISTLVQ 151 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDT 181 P K L+ + + LE +F L I + + + TL GI ++D R+ Sbjct: 152 PSSTKAFKTLTHQLYHTHVLTALENGIFNTEYPGLAIYVDRSEKTDGTLHGILVIDQRNQ 211 Query: 182 QTHKIYYAQSGSI------DLDRQAIILNDGEVHRKSPISKD-ISIMKFKSYTLQTES-- 232 ++ AQ G + + L+ G + S D + F++Y LQ + Sbjct: 212 ADQRLIIAQEGKLLNKDDETEAPIGLQLSRGTLQISSRDHPDRYRNLDFETYDLQILTGG 271 Query: 233 --ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 A + V ++ + N+ L N + E HK+ + + +I +I Sbjct: 272 TVAETVARVRQSKEMNIGEL-RTEIARLNKDGGKAWPLQVELHKKFSLPIACLILSMIG- 329 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVF-----WGFSYIIHKIEQNPYYIPILYLFLFC 345 +R +K + ++LS++F VF + + +P Sbjct: 330 ----APLAMRIKKAGRGVSLALSVAFAVFYYILLATGESLGSRGRIDPALGVWFPNLTLG 385 Query: 346 ISSIFLLMIKKK 357 + +I L++ + + Sbjct: 386 MIAIGLVLTEDR 397 >gi|320353217|ref|YP_004194556.1| permease YjgP/YjgQ family protein [Desulfobulbus propionicus DSM 2032] gi|320121719|gb|ADW17265.1| permease YjgP/YjgQ family protein [Desulfobulbus propionicus DSM 2032] Length = 508 Score = 199 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 59/370 (15%), Positives = 136/370 (36%), Gaps = 18/370 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 YI + F S L + + ++++++ + +V + L +++ Y+ P +L Sbjct: 34 LLYSYIANELLAPFFASFLILYCVFFLVRLIPLLEVVLALRIGLADFIRLFSYIFPRMLL 93 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P T + + E+L + G S ++ PV+ +A ++ + Sbjct: 94 YIIPMASMAGVIVGFTRLTNDREILALKACGVSLKQMLPPVILIAAAIATLTGFFSIRLI 153 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P KQL + L+ F D+ + + + + G+++ D R Sbjct: 154 PAGALGFKQLMFELAKEKIDKGLKAREFTEALGDIVVYVDEIDDQQRWHGVYVSDMRGRT 213 Query: 183 THKIYYAQSGSIDLDRQ----AIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 I A+SG ++ + + I+LNDG +H + D +++F Y LQ + I Sbjct: 214 QPLITVAKSGHMEAEMERMTVTIVLNDGTLH--NNEGTDNQVVRFGRYQLQISLRPPTQI 271 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLET-----YRSEFHKRLTQWLFPVIFGLISIVAA 293 + ++ + + + SE+H RL PV ++SI+ Sbjct: 272 GKEDVTSQTRGAMSQQQLLRAAAKQKPNSKLHRIFLSEYHHRLA---LPVGCFILSILGL 328 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYI-IHKIEQNPYYIPILYL---FLFCISSI 349 ++ I + L + + F+ + E + ++L ++ + Sbjct: 329 PLGLQAAPGRRAVGIPLGLVVFVLYYIAFTTARVMSEEGTLPLVLGMWLPNILFSVLTVV 388 Query: 350 FLLMIKKKYT 359 + ++ Sbjct: 389 IFWRVNRERP 398 >gi|301060831|ref|ZP_07201645.1| permease, YjgP/YjgQ family [delta proteobacterium NaphS2] gi|300445080|gb|EFK09031.1| permease, YjgP/YjgQ family [delta proteobacterium NaphS2] Length = 383 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 69/368 (18%), Positives = 147/368 (39%), Gaps = 17/368 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + YI R I +FL S +FI ++L L+ + L+ + + +LIP +L Sbjct: 2 TLYRYIFREIWPTFLASLFVFIFIMMAARMLSITELIVTRGVHLSQVAGMVLFLIPDILT 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P M ++ ++E++ + ++G S ++ PV+F ++ + Sbjct: 62 FALPAVTLMSVVVAFLRLSADSEIIAMKSSGISLYQMLPPVIFFSLAACLACVAISTFAA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSRDT 181 P + K L K ++E +F ++L ++ ++ L+ +F+VD RD Sbjct: 122 PWGNRSFKDLLFKIAETKADLGIKERIFCEPFENLVFYVNSFSREERMLKDVFVVDRRDQ 181 Query: 182 QTHKIYYAQSGSIDLDRQ----AIILNDGEVHRKSPISKDISIMKFKSYTLQTE----SA 233 + + I ++ G + + +KF +Y L A Sbjct: 182 EMTNTIVSDEAQIIPRPAERTITLLFLKGTIFMVEKNFEGSRTIKFNTYALNIGLKDVLA 241 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + ++ ++ +++ L++ + PN E R E ++L+ L + I+ Sbjct: 242 DLASRKKAPHELSVNQLISKLKSTPNTDKEYSRIMR-ELLEKLSIPL---AVFFMGIIGV 297 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF---LFCISSIF 350 A +R R + + +SL + F +++ F II I P ++ LF I S+ Sbjct: 298 PLGAQIRGRGRSAGVGVSLVV-FALYYLFLMIIRSIASTGALSPAFAVWIPDLFLIVSVV 356 Query: 351 LLMIKKKY 358 L+ + + Sbjct: 357 YLLRRASH 364 >gi|297569343|ref|YP_003690687.1| permease YjgP/YjgQ family protein [Desulfurivibrio alkaliphilus AHT2] gi|296925258|gb|ADH86068.1| permease YjgP/YjgQ family protein [Desulfurivibrio alkaliphilus AHT2] Length = 398 Score = 194 bits (494), Expect = 2e-47, Method: Composition-based stats. Identities = 57/351 (16%), Positives = 124/351 (35%), Gaps = 9/351 (2%) Query: 11 CIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFA 70 + F + L I I ++ +++ ++ + + L +I Y+ P +L P Sbjct: 15 EMLAPFFAALLVINAILFLGRLIPLLDEIFALGLGLGDFARICLYMSPRLLLFSLPMACM 74 Query: 71 METTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIK 130 M T MN + E++ + +G ++ PVL L + ++ ++ ++ PK Sbjct: 75 MGVIIAFTRMNGDYEIMALKASGIGLYRMLPPVLLLGAVTALLTLVTATVLIPKSTIATN 134 Query: 131 QLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQ 190 QL + N F + + + + P+N +G+++ D RD A Sbjct: 135 QLFWHLAKTKVEQGVRPNTFSEGLPQVVLYVEEVTPDNAWRGVYLSDLRDPDHPVTVMAP 194 Query: 191 SGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 G + D + L+DG +HR + + + F Y L+ + + Sbjct: 195 DGQLQADTAGSRIMLTLHDGTMHR--AVQEKTQTIHFGRYHLEIPLTPPAAFADRTGRHG 252 Query: 247 LSF-LLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKI 305 ++ L +TY E+H+RL I ++ I Q + Sbjct: 253 MTQDELRQTAAKLGPEHSRYKTYLIEYHQRLVLPAGAFILAMLGITLTLLSRTPHQALGV 312 Query: 306 HPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 +S + + + + P ++L + + + +K Sbjct: 313 PLGLLSFIAYYVLLTAAKTLAEGGQ--LPLGPAMWLPNLVFAIFTVYLTRK 361 >gi|304410148|ref|ZP_07391767.1| permease YjgP/YjgQ family protein [Shewanella baltica OS183] gi|307302141|ref|ZP_07581899.1| permease YjgP/YjgQ family protein [Shewanella baltica BA175] gi|304351557|gb|EFM15956.1| permease YjgP/YjgQ family protein [Shewanella baltica OS183] gi|306914179|gb|EFN44600.1| permease YjgP/YjgQ family protein [Shewanella baltica BA175] Length = 370 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 79/356 (22%), Positives = 144/356 (40%), Gaps = 24/356 (6%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y++R + ++ + L ++ I ++ + S ++++ + G +P ++ +V Sbjct: 5 KYLIREVLKAQIAVLLVLLTIFISQHFVRILADASDGDFPASLIMTLIGLNLPYLVILVL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + M E++I+ G S + + L LA++ +F + P Sbjct: 65 PLSLFLGILLAHGRMYSENEMVILHGVGVSEWYVTRVTLILAVINMLFTGYLSLYVAPWA 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNNTLQGIFIVDSRDTQ-- 182 Q+ KAQ + L + F + + + + +N L +F+ D Sbjct: 125 EEQQNQVLEKAQSEAGLAALVQGRFQASPNGRAVLFVERIGKDNELDKVFVAQLPDPDDE 184 Query: 183 --THKIYYAQSGSIDLD---RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G + D Q + LNDG ++ SP +KD +++F Y +Q + Sbjct: 185 TGVTNVVVAKGGRVQEDSSGAQQLNLNDGVRYQGSPKAKDYQMIEFGGYKMQIKEQQVDE 244 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 K L+ P + + E E +EFH RL L I LI++ A R Sbjct: 245 RRRK---------LSALPVDELVKIEGAEAV-AEFHWRLAIPLAIPIMTLIAVPLA--RV 292 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 VRQ K +F ++ + G F G K Q+ IP LYL ++ I LLM Sbjct: 293 NVRQGK-FAKMFPAVLLYLGYF-GLMVAGRKALQDG-IIP-LYLGMWWIHISALLM 344 >gi|126175309|ref|YP_001051458.1| permease YjgP/YjgQ family protein [Shewanella baltica OS155] gi|217972440|ref|YP_002357191.1| permease YjgP/YjgQ family protein [Shewanella baltica OS223] gi|125998514|gb|ABN62589.1| permease YjgP/YjgQ family protein [Shewanella baltica OS155] gi|217497575|gb|ACK45768.1| permease YjgP/YjgQ family protein [Shewanella baltica OS223] Length = 370 Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 78/356 (21%), Positives = 144/356 (40%), Gaps = 24/356 (6%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y++R + ++ + L ++ I ++ + S ++++ + G +P ++ +V Sbjct: 5 KYLIREVLKAQIAVLLVLLTIFISQHFVRILADASDGDFPASLIMTLIGLNLPYLVILVL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + M E++++ G S + + L LA++ +F + P Sbjct: 65 PLSLFLGILLAHGRMYSENEMVVLHGVGVSEWYVTRVTLILAVINMLFTGYLSLYVAPWA 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNNTLQGIFIVDSRDTQ-- 182 Q+ KAQ + L + F + + + + +N L +F+ D Sbjct: 125 EEQQNQVLEKAQSEAGLAALVQGRFQASPNGRAVLFVERIGKDNELDKVFVAQLPDPDDE 184 Query: 183 --THKIYYAQSGSIDLD---RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G + D Q + LNDG ++ SP +KD +++F Y +Q + Sbjct: 185 TGVTNVVVAKGGRVQEDSSGAQQLNLNDGVRYQGSPKAKDYQMIEFGGYKMQIKEQQVDE 244 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 K L+ P + + E E +EFH RL L I LI++ A R Sbjct: 245 RRRK---------LSALPVDELVKIEGAEAV-AEFHWRLAIPLAIPIMTLIAVPLA--RV 292 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 VRQ K +F ++ + G F G K Q+ IP LYL ++ I LLM Sbjct: 293 NVRQGK-FAKMFPAVLLYLGYF-GLMVAGRKALQDG-IIP-LYLGMWWIHISALLM 344 >gi|160876367|ref|YP_001555683.1| permease YjgP/YjgQ family protein [Shewanella baltica OS195] gi|160861889|gb|ABX50423.1| permease YjgP/YjgQ family protein [Shewanella baltica OS195] gi|315268557|gb|ADT95410.1| permease YjgP/YjgQ family protein [Shewanella baltica OS678] Length = 370 Score = 194 bits (492), Expect = 3e-47, Method: Composition-based stats. Identities = 79/356 (22%), Positives = 144/356 (40%), Gaps = 24/356 (6%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y++R + ++ + L ++ I ++ + S ++++ + G +P ++ +V Sbjct: 5 KYLIREVLKAQIAVLLVLLTIFISQHFVRILADASDGDFPASLIMTLIGLNLPYLVILVL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + M E++I+ G S + + L LA++ +F + P Sbjct: 65 PLSLFLGILLAHGRMYSENEMVILHGVGVSEWYVTRVTLILAVINMLFTGYLSLYVAPWA 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNNTLQGIFIVDSRDTQ-- 182 Q+ KAQ + L + F + + + + +N L +F+ D Sbjct: 125 EEQQNQVLEKAQSEAGLAALVQGRFQASPNGRAVLFVERIGKDNELDKVFVAQLPDPDDE 184 Query: 183 --THKIYYAQSGSIDLD---RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G + D Q + LNDG ++ SP +KD +++F Y +Q + Sbjct: 185 TGVTNVVVAKGGRVQEDSSGAQQLNLNDGVRYQGSPKAKDYQMIEFGGYKMQIKEQQVDE 244 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 K L+ P + + E E +EFH RL L I LI++ A R Sbjct: 245 RRRK---------LSALPVDELVKVEGAEAV-AEFHWRLAIPLAIPIMTLIAVPLA--RV 292 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 VRQ K +F ++ + G F G K Q+ IP LYL ++ I LLM Sbjct: 293 NVRQGK-FAKMFPAVLLYLGYF-GLMVAGRKALQDG-IIP-LYLGMWWIHISALLM 344 >gi|189425645|ref|YP_001952822.1| permease YjgP/YjgQ family protein [Geobacter lovleyi SZ] gi|189421904|gb|ACD96302.1| permease YjgP/YjgQ family protein [Geobacter lovleyi SZ] Length = 379 Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 69/347 (19%), Positives = 140/347 (40%), Gaps = 12/347 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y++R I F + + + ++++ + +V ++ L +L++ L+P+ L Sbjct: 4 RIINRYLMREIVGIFALGLTIFTLVLLMGRMVKLMEMVVANGVPLAEVLRLILLLLPSFL 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P F + ++ + E+ ++ G S TL+ PVL A ++ + Sbjct: 64 VLTIPMAFLLAVLLAFGRLSNDNEITVLKACGLSLGTLLPPVLLTAAAAALLTLFISVVA 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSRD 180 P + KQ++ S + E +F + + + +Y+ T+Q + I DSRD Sbjct: 124 VPWGNTGFKQMTMDVARKYAASAIRERIFRDDLPGIVLYVDQYDEARRTMQRVMIQDSRD 183 Query: 181 TQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + +A+SG + D I+L +G +H + D ++ F Y L ES S+ Sbjct: 184 PERPLTIFAKSGLVSSDEVNGVLRILLKNGSIH--TQHKNDYRLVSFGEYLLTAESGRST 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V D + L +P P+ +E H R +F ++++ Sbjct: 242 PPVRTELDLGIGEL-QRGSRSPQLAPQARLKMATELHSRFAFPCATFVFAILAL---PLG 297 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 R+ K IS+ I + S++ E+ P L ++L Sbjct: 298 LSNRRSGKGSGFTISILILLVYYVLLSFLRTLAEK-GGIPPALAVWL 343 >gi|153001631|ref|YP_001367312.1| permease YjgP/YjgQ family protein [Shewanella baltica OS185] gi|151366249|gb|ABS09249.1| permease YjgP/YjgQ family protein [Shewanella baltica OS185] Length = 370 Score = 192 bits (488), Expect = 8e-47, Method: Composition-based stats. Identities = 74/353 (20%), Positives = 140/353 (39%), Gaps = 24/353 (6%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y++R + ++ + L ++ I ++ + S ++++ + G +P ++ +V Sbjct: 5 KYLIREVLKAQIAVLLVLLTIFISQHFVRILADASDGDFPASLIMTLIGLNLPYLVILVL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + M E++++ G S + + L LA++ +F + P Sbjct: 65 PLSLFLGILLAHGRMYSENEMVVLHGVGVSEWYVTRVTLILAVINMLFTGYLSLYVAPWA 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNNTLQGIFIVDSRDTQ-- 182 Q+ KAQ + L + F + + + + +N L +F+ D Sbjct: 125 EEQQNQVLEKAQSEAGLAALVQGRFQASPNGRAVLFVERIGKDNELDKVFVAQLPDPDDE 184 Query: 183 --THKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G + D + LNDG ++ SP +KD +++F Y +Q + Sbjct: 185 TGVTNVVVAKGGRVQEDSTGAQQLNLNDGVRYQGSPKAKDYQMIEFGGYKMQIKEQQVDE 244 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 K L+ P + + E E +EFH RL L I LI++ A R Sbjct: 245 RRRK---------LSALPVDELVKIEGAEAV-AEFHWRLAIPLAIPIMTLIAVPLA--RV 292 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 VRQ K +F ++ + G F G K Q+ IP LYL ++ I Sbjct: 293 NVRQGK-FAKMFPAVLLYLGYF-GLMVAGRKALQDG-IIP-LYLGMWWIHISA 341 >gi|330813916|ref|YP_004358155.1| putative permease YjgP/YjgQ family protein [Candidatus Pelagibacter sp. IMCC9063] gi|327487011|gb|AEA81416.1| putative permease YjgP/YjgQ family protein [Candidatus Pelagibacter sp. IMCC9063] Length = 358 Score = 190 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 70/359 (19%), Positives = 150/359 (41%), Gaps = 17/359 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 Y + I RS+ + F+ W+ Q + + L++ S+++ + Y +P ++ Sbjct: 4 NKLNNYFIAEILRSYAFVLATLSFLIWIAQSARFLYLITDMGLSMSVYVPYILYQLPKIV 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + F + + N E+ I +G S+ T++ +L ++++ + F + Sbjct: 64 SQMMLISFLISLFISIIKFQNNKEMEIYWLSGVSKKTIVWTILKISLVPTFVAFFLYIYL 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + A ++ + +++N F +L + + + + L+ +++ Sbjct: 124 APMTGLISRNILANSEFTFVNALVKKNNFNSPFRNLTVYVGENDNRGNLEKVYLF----- 178 Query: 182 QTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKS--YTLQTESANSST 237 + +K A+ G + ++ + L DG +H+K+ + I I+KF+ Y +N +T Sbjct: 179 ENNKTIIAKQGKVLNVDNKNYLQLIDGFIHQKNK-NGKIQIIKFEETLYDFTKYKSNLTT 237 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 K +++L +L N NN + + E HKR+ + LF I L+ Sbjct: 238 YP-KLQERSLLWLFNELKNNRKEKNNTI----FEIHKRIFKPLFIPIIALLCCFILYGNN 292 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 K+ SLS+ F +F F +I N ++ LY F C+ I + K Sbjct: 293 EKFNLVKLRFSIFSLSVLFIIF--FEILISLSSSNIFFQYFLYSFPMCVGIIIYFFLHK 349 >gi|218778207|ref|YP_002429525.1| permease YjgP/YjgQ family protein [Desulfatibacillum alkenivorans AK-01] gi|218759591|gb|ACL02057.1| permease YjgP/YjgQ family protein [Desulfatibacillum alkenivorans AK-01] Length = 398 Score = 190 bits (482), Expect = 4e-46, Method: Composition-based stats. Identities = 62/359 (17%), Positives = 119/359 (33%), Gaps = 11/359 (3%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+L + F ++ L I + ++LQ + V + L ++ + Y +P L V Sbjct: 9 KYMLGEMLPPFGVTLLVFALIFLMTRMLQLTDYVVNFRVGLGHVMMLLMYSMPFFLIFVI 68 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P M M+ + E+ + G S +L+ PVL ++ I P Sbjct: 69 PMSTMMAVLLTFLRMSSDNEITALKAAGWSLYSLLPPVLAFCTAAALLTASMSFIGLPWG 128 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSRDTQTH 184 R K+L L+E F R ++ + + + + TL +FI D RD Q Sbjct: 129 RMAAKELLIDVARQNVEIGLKERSFERTFKNVVLYVGSVDVESRTLHHVFIEDRRDKQLS 188 Query: 185 KIYYAQSGSIDL----DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT---ESANSST 237 A +G I D + LNDG + R + + F SY + + Sbjct: 189 STIMASTGRIIPSDGDDIWQLRLNDGVIVRADRKKSSMFTVNFDSYDFNLNLGTALGARD 248 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + LL E HK+ + ++ GL ++ Sbjct: 249 GEKDEEEMYFKELLTFVKRYNKKDDRYYLALL-EVHKKFSIPFSCIVLGLAAVPLGIVSR 307 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R+ + + + + + P +++ I ++ + + Sbjct: 308 SARRSFGVALGLGLFLLYYLLLSAGWVFGEAGKYPPMIG--MWVPNLVIGAMGGFSLVR 364 >gi|114768924|ref|ZP_01446550.1| Predicted permease [alpha proteobacterium HTCC2255] gi|114549841|gb|EAU52722.1| Predicted permease [alpha proteobacterium HTCC2255] Length = 407 Score = 190 bits (482), Expect = 4e-46, Method: Composition-based stats. Identities = 68/357 (19%), Positives = 135/357 (37%), Gaps = 6/357 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y+ + + F C I I + Q L I++V+ + + I+ ++S ++P VL Sbjct: 34 TKLDRYLFKQLIGPFAFFCFIISGILLLNQALGIIDIVTENGQPAYIVFELSFLILPKVL 93 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + + ++ + ELL++ + G S I L KP L IL++ LF+ + + Sbjct: 94 ITAISISGFIASVLIINRLYNEEELLVMMSIGRSFIELSKPFLLFGILIASLLFLVVHNL 153 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P S + + + ++ + F + N L I I + Sbjct: 154 NPYAHSKFIEAQERIKKEYVTQIIKPDQFISYQNKYTFFFGDKGNNGELSEILIEEQITP 213 Query: 182 QTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI- 238 T + A++G + + D A++L +G + +S S+++F + TI Sbjct: 214 DTTLTHIAKNGQVIANKDSNALLLRNGSTQSYNKVSGTFSLLQFDTLVFDLNQLRKDTIS 273 Query: 239 -VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + N + L ++ P L +H R + L ++F L+ ++ Sbjct: 274 SESSLSSLNSTMLKKKISALESFDPRLGRAVSL-YHDRNAKVLLAMLFPLLGMLGLLLGG 332 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R I I + I + + +NP P YL + I L+I Sbjct: 333 FNRFGYLIR-IISCILIMASLDLLRGASKSWVVENPLIWPAQYLSPLLCTFIIALII 388 >gi|94266927|ref|ZP_01290580.1| permease YjgP/YjgQ [delta proteobacterium MLMS-1] gi|93452379|gb|EAT02998.1| permease YjgP/YjgQ [delta proteobacterium MLMS-1] Length = 400 Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats. Identities = 60/351 (17%), Positives = 128/351 (36%), Gaps = 12/351 (3%) Query: 11 CIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFA 70 + F + L I + ++ +++ ++ + S L L++ Y+ P++L P Sbjct: 15 EMLAPFFAALLVINAVLFLGRLVPMLDEIFSLGVGLGDFLRVVAYITPSMLLFSLPMAAM 74 Query: 71 METTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIK 130 M T + + E++ + +G S ++ PV+F +L + + ++ P+ + + Sbjct: 75 MAVIIAFTRLAGDLEIMALKASGISLPRMLPPVVFFGLLTGLMTLATATVLIPRGMTAMD 134 Query: 131 QLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSRDTQTHKIYYA 189 QL + E F D+ + + +P+ G+++ D RD A Sbjct: 135 QLMIHLAKEHIEEGIREKTFSEGLGDVVLYVDDISPDQRFWHGVYLSDLRDKDNPLTISA 194 Query: 190 QSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQ 245 Q G++ D A + L+DG +HR + FK Y L+ + + + Sbjct: 195 QGGNLRADPAAGRVVLSLSDGSLHR--SAGAKSQTIFFKHYKLEIPLDSPTLGPPGRSSM 252 Query: 246 NLSFLLNPNPNNPNYRPELLETYR--SEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 + L PE YR E+H+RL + + ++ + + R Sbjct: 253 TQAQLRQRATE---LGPEHPRQYRYIGEYHQRLALPVGCFLLAMLGLSLSQMGQGSRLAL 309 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + S + + + L LF ++ +LL Sbjct: 310 GVPLGLASFVAYYVLLTAAKSLGEAGTLPMALAIWLPNLLFLLAGGYLLWR 360 >gi|329890121|ref|ZP_08268464.1| hypothetical protein BDIM_18180 [Brevundimonas diminuta ATCC 11568] gi|328845422|gb|EGF94986.1| hypothetical protein BDIM_18180 [Brevundimonas diminuta ATCC 11568] Length = 342 Score = 189 bits (479), Expect = 8e-46, Method: Composition-based stats. Identities = 51/325 (15%), Positives = 126/325 (38%), Gaps = 8/325 (2%) Query: 36 INLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS 95 + ++ +S+ +++K++ +P ++ ++ P + LT + R EL G S Sbjct: 1 MEVIVERGQSVWVMVKLTLLALPQLIAVILPIGLFVGALIALTRLQREQELTAAYAAGVS 60 Query: 96 RITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD 155 R LI+P L +A+++++ + ++P + ++ + + L +EE F + D Sbjct: 61 RWALIRPALQIALIVTVISLLVNVFVQPWAQREGRRQAFAIRTDLAALLVEEGRFVQGPD 120 Query: 156 DLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSP 213 L + + + N ++ +F+ + +T + A++ + + +G + R S Sbjct: 121 GLTVYVQQIEQNGLMKNLFVY-LDNGKTVTTWDAETARFGRVDGLPVLTMQNGSMQRYS- 178 Query: 214 ISKDISIMKFKSYTLQTE--SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSE 271 + ++ + F + S I K +D L+ L +P P +E Sbjct: 179 SREVLNQLSFDQQVFDLSPYAKTSERIRFKPSDLWLTDLFDPTPA-LLETAGTRGELAAE 237 Query: 272 FHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ 331 H RL L+ + ++ A A R + + + ++ Sbjct: 238 GHSRLASPLYALAAMAFALAAILGGAFSRSGYAGRIARAAGAF-LVLRVIGYGLVAGSAW 296 Query: 332 NPYYIPILYLFLFCISSIFLLMIKK 356 N + Y+ + + L ++ + Sbjct: 297 NGALNVLQYVVPLAATFLALRILFR 321 >gi|119773933|ref|YP_926673.1| hypothetical protein Sama_0796 [Shewanella amazonensis SB2B] gi|119766433|gb|ABL99003.1| conserved hypothetical protein [Shewanella amazonensis SB2B] Length = 369 Score = 189 bits (479), Expect = 8e-46, Method: Composition-based stats. Identities = 64/363 (17%), Positives = 140/363 (38%), Gaps = 25/363 (6%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ + + ++ + L ++ + ++ + S ++++ + G +P + +V Sbjct: 5 RYLFKEVFKAQIAVLLVLLTVFISQHFVRVLADASDGEFPASLVVTLLGLNLPYLAVLVL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + M E+++ G S + + L LA+L +F + P Sbjct: 65 PLSLFLGILMAHGRMYAENEMVVFHGVGVSEWYVTRVTLLLAVLNMLFTGYLSLFVTPWA 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNNTLQGIFIVDSRDTQTH 184 Q+ KAQ + L + F D + + K +N L+ +F+ D Sbjct: 125 EERQNQVLEKAQSEAGLAALVQGRFQTSPDGRAVLFVEKIGKDNELEKVFVAQLPDPDDE 184 Query: 185 ----KIYYAQSGSIDLD---RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A G + D Q + LNDG ++ SP S D +++F Y +Q + Sbjct: 185 HGQINLVSAAGGKVVEDASGAQQLKLNDGVRYQGSPKSLDYQVLEFGGYGMQIKEQEVDE 244 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 K + L+ LL+ N +E H R+ L L++++A Sbjct: 245 RRRKMSALPLNQLLDQNTPEAV----------AELHWRIAIPL---AIPLMTLIAVPMAR 291 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN---PYYIPILYLFLFCISSIFLLMI 354 + ++ K + ++ + G F G K ++ P ++ + ++ L + +L+ Sbjct: 292 VNVRQGKFAKMLPAILLYLGYF-GLMVAGRKALEDEVVPAFMGMWWIHLSALVMGIMLLG 350 Query: 355 KKK 357 K++ Sbjct: 351 KER 353 >gi|218961270|ref|YP_001741045.1| putative Permease YjgP/YjgQ [Candidatus Cloacamonas acidaminovorans] gi|167729927|emb|CAO80839.1| putative Permease YjgP/YjgQ [Candidatus Cloacamonas acidaminovorans] Length = 442 Score = 189 bits (479), Expect = 9e-46, Method: Composition-based stats. Identities = 75/411 (18%), Positives = 152/411 (36%), Gaps = 63/411 (15%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y+L+ F ++ + + F+ +I+ +NL+ + ++ G +P + Sbjct: 1 MKILKRYLLKEHIAPFFIALMVVTFVLLSDRIIDLMNLIIEKKLPWQTVFEVFGLSLPYM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + T M+ + E+ I ++G + +LI P++ A+LL+ + + Sbjct: 61 LALSIPMAVLVATILAFGRMSVDREITAIKSSGINVYSLIGPLVIAALLLTGLMVYFNHW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P +K L K + ++E F D I + ++ L + I D Sbjct: 121 FLPDTNHKLKNLMLKIAYYKPMTIIKEKEFTNFMD-YTIYARE-TTDSLLTDVLIYDRSQ 178 Query: 181 TQTHKIYYAQSGSI----DLDRQAIILNDGEVHRKSPIS-KDISIMKFKSYTLQTESANS 235 + + +A+SG++ + + IILNDGE+H ++ F Y + + S Sbjct: 179 SHFPRTIFAKSGNVIQKDNGNSLQIILNDGEMHERNEKEVGKYQKTTFSRYIINVRNLGS 238 Query: 236 STIVLKA---NDQNLS-----------------------------FLLNPNPNN------ 257 + + + +D+ ++ LL +P N Sbjct: 239 NMEMFETGYRSDREMTYNQLITAIGDHKKELQTKQQEIEELNKRIELLQKSPQNFTRNME 298 Query: 258 --------------PNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 EL+ + E+HK+ + +IF LI I Sbjct: 299 LRRLQAMQKMVIDRTQELKELINSLLVEYHKKFSMSFAIIIFVLIGIPLGLMTRTS---- 354 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 I F SI F V++ ++ + P L ++L I + L ++ Sbjct: 355 GIGMSFSVSSIIFLVYYIALNGGEQLADKGFMPPFLAMWLANIIFLILAVL 405 >gi|94263395|ref|ZP_01287209.1| permease YjgP/YjgQ [delta proteobacterium MLMS-1] gi|93456231|gb|EAT06365.1| permease YjgP/YjgQ [delta proteobacterium MLMS-1] Length = 400 Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats. Identities = 60/351 (17%), Positives = 128/351 (36%), Gaps = 12/351 (3%) Query: 11 CIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFA 70 + F + L I + ++ +++ ++ + S L L++ Y+ P++L P Sbjct: 15 EMLAPFFAALLVINAVLFLGRLVPMLDEIFSLGVGLGDFLRVVAYITPSMLLFSLPMAAM 74 Query: 71 METTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIK 130 M T + + E++ + +G S ++ PV+F +L + + ++ P+ + + Sbjct: 75 MAVIIAFTRLAGDLEIMALKASGISLPRMLPPVVFFGLLTGLMTLATATVLIPRGMTAMD 134 Query: 131 QLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSRDTQTHKIYYA 189 QL + E F D+ + + +P+ G+++ D RD A Sbjct: 135 QLMIHLAKEHIEEGIREKTFSEGLGDVVLYVDDISPDQRFWHGVYLSDLRDKDNPLTISA 194 Query: 190 QSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQ 245 Q G++ D A + L+DG +HR + FK Y L+ + + + Sbjct: 195 QGGNLRADPAAGRVVLSLSDGSLHR--SAGAKSQTIFFKHYNLEIPLDSPTLGPPGRSSM 252 Query: 246 NLSFLLNPNPNNPNYRPELLETYR--SEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 + L PE YR E+H+RL + + ++ + + R Sbjct: 253 TQAQLRQRATE---LGPEHPRQYRYIGEYHQRLALPVGCFLLAMLGLSLSQMGQGSRLAL 309 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + S + + + L LF ++ +LL Sbjct: 310 GVPLGLASFVAYYVLLTAAKSLGEAGTLPMALAIWLPNLLFLLAGGYLLWR 360 >gi|108761666|ref|YP_631128.1| hypothetical protein MXAN_2917 [Myxococcus xanthus DK 1622] gi|108465546|gb|ABF90731.1| putative membrane protein [Myxococcus xanthus DK 1622] Length = 370 Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats. Identities = 64/368 (17%), Positives = 138/368 (37%), Gaps = 14/368 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+L + + F+ + +V+Q L+ +++ S+ +L + ++ YL P Sbjct: 1 MNRLSRYLLGELLVPLGVWVAFMFLLLFVMQFLRGTDVLLGSSVTLVDMARLLAYLAPHF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M P F + L + + EL+ + G + L+ + +A+ LS+ + + + Sbjct: 61 LMMALPIAFLLAILLGLGRLGEDRELVALQALGIGPVRLLAAPMGIAVALSVLMLVITST 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +P + +K L ++ ++ +F+ +L + + + + + + D R+ Sbjct: 121 AQPWGLTGLKVLVSEVIRKNAVGDVKSGVFYEDLSNLTLYAEQVSADGKWTNVLLHDDRE 180 Query: 181 TQTHKIYYAQSGSIDLDRQAII----LNDGEVHRK-SPISKDISIMKFKSYTLQT---ES 232 + + AQ G + + L GEVHR +++ SI++F + S Sbjct: 181 ANSPLLVLAQRGQVGTSTSGEVLRFALEAGEVHRSAGRETEEYSIIRFDQAEISVGVGAS 240 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + + ++ L + E YR H RL L P+ F L+ Sbjct: 241 MGKRSRFSYSREELTPGELMEAAREAEAQGEDARMYRMALHSRLGNALAPIAFALLGTPL 300 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISSI 349 A R RQ + ++L + F + K + + +F + Sbjct: 301 AMGR---RQSGRAWGYLLTLGGYVLYYLLSRVFEQMGQKGQLPAGLAGQMANLVFVAVGL 357 Query: 350 FLLMIKKK 357 L + Sbjct: 358 VALYRVSR 365 >gi|157374154|ref|YP_001472754.1| permease YjgP/YjgQ family protein [Shewanella sediminis HAW-EB3] gi|157316528|gb|ABV35626.1| permease YjgP/YjgQ family protein [Shewanella sediminis HAW-EB3] Length = 370 Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 60/356 (16%), Positives = 137/356 (38%), Gaps = 24/356 (6%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y++R + ++ + ++ I ++ + S ++++ + G +P + +V Sbjct: 5 RYLIREVFKAQIAVLFVLLAIFISQHFVRVLANASDGEFPASLVMTLLGLNLPYLAVLVL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + M +E++++ G S + + L LA++ +F + P Sbjct: 65 PLSLFLGILLAHGRMYAESEMVVLHGVGVSEWYITRVTLLLAVINMLFTGYLSVFVTPWA 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNNTLQGIFIVDSRDT--- 181 Q+ AQ + + + F + + + + + +N L +F+ D Sbjct: 125 EEKQNQVLESAQSEAGLAAITQGRFQTSPNGRAVLFVERIDRDNQLDKVFVAQLPDPEDE 184 Query: 182 -QTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 I A+ GS+ D + LNDG ++ +P D +++F Y +Q + Sbjct: 185 SGQSNIVMAKGGSVVEDGSGGQRLQLNDGVQYQGTPKKVDFQVVEFGGYQMQIKEQEVDE 244 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 K + + L+ + +EFH RL L L++++A Sbjct: 245 RRRKLSALPIKDLMALD----------GPEATAEFHWRLAIPL---AIPLMTLIAVPMAR 291 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + ++ K +F ++ + G F G K ++ +P YL ++ I + L + Sbjct: 292 VNVRQGKFAKMFPAILLYLGYF-GLMIAGRKALEDG-VVPA-YLGMWWIHASALFL 344 >gi|294084200|ref|YP_003550958.1| hypothetical protein SAR116_0631 [Candidatus Puniceispirillum marinum IMCC1322] gi|292663773|gb|ADE38874.1| hypothetical membrane spanning protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 364 Score = 186 bits (473), Expect = 4e-45, Method: Composition-based stats. Identities = 63/354 (17%), Positives = 138/354 (38%), Gaps = 6/354 (1%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F +YI + R+ + + ++ I W+ Q ++ + LV + + L +S +IP L Sbjct: 2 QFNIYIFNQLFRATCVISMVLIGIMWLFQTIKLLELVVNKGAPIFDFLLMSITVIPLWLT 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + V + + EL ++ G S L K + L +LL+ L+ + + Sbjct: 62 IALPIAGFVAVNWVFHRILADRELTVMQAVGLSPAQLAKAPIALGMLLTSVLYFNSVYLL 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P K L + + L++ +F + L + I N+ + +FI D+R Sbjct: 122 PTSFGIYKDLQFNLRNGIPVILLQDGVFTEVVPGLTMFIGSREENDVVSDVFIQDTRTID 181 Query: 183 THKIYYAQSGSIDLDR--QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 I A++G +IL +G+ + + +++ F++++L + Sbjct: 182 KTIILTAENGKFVGKDYHPTLILGNGQRLEVNSDGESGALLLFETHSLSLVTNEKKPSER 241 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 AND N + N + + +E H R+ + + ++ ++A +R Sbjct: 242 IANDMNEDSISNLLDAKKSPYADYAFQRIAEGHYRIASPVLALALIMM-VIAITLHGQLR 300 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF---LFCISSIFL 351 + + I++S G+ P+ ++++ I I L Sbjct: 301 RDLWLRRSLINISCCLGLIVALILARSWTITMPHLWILIHIVTTLPILICGIAL 354 >gi|157960739|ref|YP_001500773.1| permease YjgP/YjgQ family protein [Shewanella pealeana ATCC 700345] gi|157845739|gb|ABV86238.1| permease YjgP/YjgQ family protein [Shewanella pealeana ATCC 700345] Length = 371 Score = 186 bits (472), Expect = 5e-45, Method: Composition-based stats. Identities = 61/363 (16%), Positives = 140/363 (38%), Gaps = 25/363 (6%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y++R + ++ + L ++ I ++ + S ++++ + G +P + +V Sbjct: 5 RYLIREVFKAQIAVLLVLLAIFISQHFVRVLADASDGDFPASLVMTLLGLNMPFLTVLVL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + M E++I G S + + L LA++ +F + P Sbjct: 65 PLSLFLGILLAHGRMYAENEMVIFHGVGISEWYITRITLLLAVINMVFTAFLSIYVAPWA 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNNTLQGIFIVDSRDTQTH 184 Q+ AQ + L + F + + + + +N L +F+ D Sbjct: 125 EERQNQVLEHAQSEAGLAALTQGRFQTSPNGRAVLFVERIGRDNQLDKVFVAQLPDPDDE 184 Query: 185 K----IYYAQSGSIDLD---RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A++G + D Q + L DG ++ +P D +++F Y +Q + Sbjct: 185 TGVANVVVARTGKVVEDEIGGQRLQLEDGVQYQGNPKRVDYQVVEFGGYQMQIKEQAVDE 244 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 K + + L++ + +EFH RL L L++++A Sbjct: 245 RRRKLSAMPIGQLMDIDSPEAT----------AEFHWRLAIPL---AIPLMTLIAVPMAR 291 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN---PYYIPILYLFLFCISSIFLLMI 354 + ++ K +F ++ + G F G K ++ P Y+ + ++ ++ LL+ Sbjct: 292 VNNRQGKFAKMFPAILLYLGYF-GLMVAGRKSLEDGVIPQYLGMWWIHASALAIGILLLG 350 Query: 355 KKK 357 K++ Sbjct: 351 KER 353 >gi|167622903|ref|YP_001673197.1| permease YjgP/YjgQ family protein [Shewanella halifaxensis HAW-EB4] gi|167352925|gb|ABZ75538.1| permease YjgP/YjgQ family protein [Shewanella halifaxensis HAW-EB4] Length = 371 Score = 185 bits (470), Expect = 9e-45, Method: Composition-based stats. Identities = 60/363 (16%), Positives = 140/363 (38%), Gaps = 25/363 (6%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y++R + ++ + L ++ I ++ + S ++++ + G +P + +V Sbjct: 5 RYLIREVFKAQIAVLLVLLAIFISQHFVRVLADASDGEFPASLVMTLLGLNMPFLTVLVL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + M E++I G S + + L LA++ +F + P Sbjct: 65 PLSLFLGILLAHGRMYAENEMVIFHGVGISEWYITRVTLLLAVMNMVFTAFLSIYVAPWA 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNNTLQGIFIVDSRDTQTH 184 Q+ AQ + L + F + + + + +N L +F+ + Sbjct: 125 EERQNQVLEHAQSEAGLAALTQGRFQTSPNGRAVLFVERIGRDNQLDKVFVAQLPEPDDE 184 Query: 185 K----IYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A++G + D + L DG ++ SP D +++F Y +Q + Sbjct: 185 TGVANVVVARTGKVLEDETGGQRLQLEDGVQYQGSPKRVDYQVVEFGGYQMQIKEQEVGE 244 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 K + + L++ + + +EFH RL L L++++A Sbjct: 245 RRRKLSAMPIGELMDIDTPEAS----------AEFHWRLAIPL---AIPLMTLIAVPMAR 291 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN---PYYIPILYLFLFCISSIFLLMI 354 + ++ K +F ++ + G F G K ++ P Y+ + ++ ++ LL+ Sbjct: 292 VNNRQGKFAKMFPAILLYLGYF-GLMVAGRKSLEDGVIPQYLGMWWIHASALAIGILLLG 350 Query: 355 KKK 357 K++ Sbjct: 351 KER 353 >gi|212636935|ref|YP_002313460.1| permease YjgP/YjgQ [Shewanella piezotolerans WP3] gi|212558419|gb|ACJ30873.1| Permease YjgP/YjgQ [Shewanella piezotolerans WP3] Length = 371 Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats. Identities = 60/351 (17%), Positives = 134/351 (38%), Gaps = 22/351 (6%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y++R + ++ + L ++ I ++ + S ++++ + G +P ++ +V Sbjct: 5 RYLIREVLKAQIAVLLVLLAIFISQHFVRVLADASDGEFPASLVMTLLGLNMPFLIVLVL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + M E++I+ G S + + L LA++ IF + P Sbjct: 65 PLSLFLGILLAHGRMYSENEMVILHGVGISEWYITRVTLLLAVVNMIFTGFLSIYVTPWA 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNNTLQGIFIVDSRDTQTH 184 Q+ AQ + L + F + + + + +N L +F+ D Sbjct: 125 EERQNQVLEHAQSEAGIAALTQGRFQTSPNGRAVLFVERIGRDNKLDKVFVAQLPDPDDE 184 Query: 185 K----IYYAQSGSIDLD---RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+SG + D Q + L DG ++ SP D +++F Y ++ + + Sbjct: 185 TGLANVVVARSGKVVEDATGGQRLQLEDGVQYQGSPRRVDYQVVEFGGYQMEIKDQEAGE 244 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 K + + L++ + +EFH RL L L++++A Sbjct: 245 RRRKLSALPIDQLMDIDTPEAT----------AEFHWRLAIPL---AIPLMTLIAVPMAR 291 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 + ++ K +F ++ + G F G K ++ L ++ S+ Sbjct: 292 VNNRQGKFAKMFPAILLYLGYF-GLMVAGRKSLEDGVIPEFLGMWWIHASA 341 >gi|116747639|ref|YP_844326.1| permease YjgP/YjgQ family protein [Syntrophobacter fumaroxidans MPOB] gi|116696703|gb|ABK15891.1| permease YjgP/YjgQ family protein [Syntrophobacter fumaroxidans MPOB] Length = 423 Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats. Identities = 69/370 (18%), Positives = 138/370 (37%), Gaps = 22/370 (5%) Query: 1 MK-SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPT 59 MK + Y+++ + + + + ++ Q + ++ +S+ +L L+ + +P Sbjct: 33 MKMTLYRYLIKEQMVPLGVCLMGVSLVLITGRLFQLLKVLFTSSFTLGDLMALVALAMPK 92 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ P + +N + EL+ + G V+ L + +++ F++ Sbjct: 93 LMLFALPMASLLGVLLAFVRLNSDNELIALRAAGIGFHQFFPAVVSLLLGVTLISFVNMI 152 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDS 178 + P + + ++E F L NP +++GIF+ D Sbjct: 153 FVIPPTGKAFEVKLRSMARSGLPVLMKEGTFITAIPKLTFFFQSVNPTELSVRGIFVQDR 212 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILN----DGEVHRKSPISKDISIMKFKSYTLQTESAN 234 R+ + A+S I R + L +G + R + K+ + FK+Y L Sbjct: 213 REEKVRLAIVAESARIVYQRDSNHLTFKIANGSITRVADDMKNAQAVSFKAYDLSLSLDE 272 Query: 235 ----SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 + + + L L L EFH+RL FP L+ + Sbjct: 273 LIGSARGSKMNKREMTLRELYRVIVEKTGDVGHAL-----EFHQRLA---FPSGCLLLGL 324 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF---LFCIS 347 + A A+ RQR +I I I L + + S + +N P L + L CI+ Sbjct: 325 IGAPLGAVFRQRGRIAGITIGLVVFLAYYVILS-AGKGLGENHLVHPFLACWAPNLLCIA 383 Query: 348 SIFLLMIKKK 357 + F L K + Sbjct: 384 ASFYLWRKMR 393 >gi|170725439|ref|YP_001759465.1| permease YjgP/YjgQ family protein [Shewanella woodyi ATCC 51908] gi|169810786|gb|ACA85370.1| permease YjgP/YjgQ family protein [Shewanella woodyi ATCC 51908] Length = 370 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 63/363 (17%), Positives = 145/363 (39%), Gaps = 25/363 (6%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y++R + ++ + ++ I ++ + S ++++ + G +P + +V Sbjct: 5 RYLIREVLKAQIAVLFVLLAIFISQHFVRVLANASDGEFPASLVMTLLGLNLPYLAVLVL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P F + M +E++I+ + G S + + L LA++ + + + P Sbjct: 65 PLSFFLGILMAHGRMYAESEMVILHSVGVSEWYITRVTLLLAVINMLITGVLAVYVTPWA 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNNTLQGIFIVDSRDT--- 181 Q+ AQ + + + F + + + + +N L +F+ D Sbjct: 125 EERQNQVLEHAQSEAGLAAITQGRFQTSPNGRAVLFVERIGRDNELDKVFVAQLPDPEAE 184 Query: 182 -QTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 I AQ G + D + L DG ++ +P D +++F Y +Q + + Sbjct: 185 QGQSNIVLAQGGKVIEDETGGQRLQLRDGVQYQGTPKQVDFQVIEFGGYQMQIKEQEVNE 244 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 K + + L+ + E E+ ++EFH RL L L++++A Sbjct: 245 RRRKLSALPIEELM---------KQEGPES-KAEFHWRLAIPL---SIPLLTLIAVPMAR 291 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN---PYYIPILYLFLFCISSIFLLMI 354 + ++ K +F ++ + G F G K ++ P Y+ + ++ L + LL+ Sbjct: 292 VNVRQGKFAKMFPAILLYLGYF-GLMIAGRKALEDGIIPGYLGMWWIHLSALILGGLLLG 350 Query: 355 KKK 357 K++ Sbjct: 351 KER 353 >gi|224368911|ref|YP_002603073.1| predicted permease family protein [Desulfobacterium autotrophicum HRM2] gi|223691628|gb|ACN14911.1| predicted permease family protein [Desulfobacterium autotrophicum HRM2] Length = 391 Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats. Identities = 65/365 (17%), Positives = 131/365 (35%), Gaps = 13/365 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI R + F +S +F+ I + +I + N+V + + +L + +P Sbjct: 2 MTTINRYIFRELIPPFAISAVFLTSIFIMTRIPEITNMVVNYNTGIFSVLLLIACTLPRF 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + M+ + E++ + G + L+ PVL +L + I Sbjct: 62 MEFTIPMSVMISVLLTFMRMSGDNEIIALKGGGITIYRLLPPVLIFCLLGTAVTLWITII 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 P + K L + L + F D+ I IS + L+ +FI D R Sbjct: 122 GVPLGNMSFKTLGIAMARSNLNVALSDGTFNSSFKDVMIYISSMDVKTKKLRDLFIEDRR 181 Query: 180 DTQTHKIYYAQSGSIDLDRQ----AIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 I A G + D A+ L G V++ S+ I+ + F +Y + + A Sbjct: 182 TKDRVTISVAPEGVLVKDAVTGSYALRLYGGSVNQVDLKSRSINNVGFDTYDINLDFAQV 241 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRS--EFHKRLTQWLFPVIFGLISIVAA 293 N LN E E + EFH++ + + + G++++ Sbjct: 242 QKSSKVGNKDFDEMTLNELRAFLKKTSEKPELNAALMEFHEKFSIPIACIAMGILAMALG 301 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI--LYLFLFCISSIFL 351 + A R+ + + + +N Y P+ +++ + I Sbjct: 302 LQAASSRKTAGFGLGMFFFLLYYLLLAAGW----SAGENGLYPPLIGMWMPDIVMGGIGS 357 Query: 352 LMIKK 356 ++ + Sbjct: 358 FLLYR 362 >gi|163750106|ref|ZP_02157349.1| hypothetical protein KT99_20601 [Shewanella benthica KT99] gi|161330163|gb|EDQ01145.1| hypothetical protein KT99_20601 [Shewanella benthica KT99] Length = 364 Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 64/361 (17%), Positives = 140/361 (38%), Gaps = 25/361 (6%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 ++R + ++ + ++ I ++ + S ++++ + G +P + +V P Sbjct: 1 MIREVFKAQIAVLAVLLAIFISQHFVRVLADASDGEFPASLVMTLLGLNLPYLAVLVIPL 60 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 + M ++E++I+ G S + + L LA+ IF I + P Sbjct: 61 SLFLGILMAHGRMYADSEMVILHGVGVSEWYITRVTLLLAVGNMIFTGILSVYVTPWAEE 120 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNNTLQGIFIVDSRDTQ---- 182 Q+ AQ + + + F + + + + NN L +F+ D Sbjct: 121 KQNQVLEHAQSEAGLAAITQGRFQTSPNGRAVLFVERIGRNNELYKVFVAQLPDPDDESG 180 Query: 183 THKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 I AQ G + D + L+DG ++ +P D I++F SY +Q + Sbjct: 181 ISNIVVAQGGKVIEDETGGQRLQLSDGVQYQATPKKVDFQIIEFGSYQMQIKEQPVDERR 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 K + ++ L+ + P +EFH RL L L++++A + Sbjct: 241 RKLSAMPINELM--DIEGPAAT--------AEFHWRLAIPL---AIPLMTLIAVPMARVN 287 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN---PYYIPILYLFLFCISSIFLLMIKK 356 ++ K +F ++ + G F K ++ P Y+ + ++ + LL+ K+ Sbjct: 288 VRQGKFAKMFPAVLLYLGYFC-LMIAGRKALEDGVIPEYLGMWWIHASALCMGILLLGKE 346 Query: 357 K 357 + Sbjct: 347 R 347 >gi|239616611|ref|YP_002939933.1| permease YjgP/YjgQ family protein [Kosmotoga olearia TBF 19.5.1] gi|239505442|gb|ACR78929.1| permease YjgP/YjgQ family protein [Kosmotoga olearia TBF 19.5.1] Length = 1466 Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats. Identities = 68/356 (19%), Positives = 134/356 (37%), Gaps = 5/356 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ YI + +F + + + + Q +L+ ++ L + Y +P Sbjct: 1 MRILIKYIFKQSMGAFFIGLGGFLIFVSLELLYQLSDLIVRYKVGIDKLFLLIYYNLPYF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + L+ M + EL+ + G + T++ P + A+LLS ++ + Sbjct: 61 IVLGIPVGVLLAIFWTLSRMQSDNELIALQTHGITLKTVVLPFVIFAVLLSGITYLFNDY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 I P + A+ L+EN F Y+ I K +P L+ I + D Sbjct: 121 IVPYANRKAYEAQARFIYRRPEVTLKENAFMEDGKGRYLYIKKIDPETGELKKILLYDLS 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +T A+S + + D+ I++DG V M F+S L S I Sbjct: 181 GGKTRVT-SAKSATKEGDK--WIMHDGRVFELDSKGFLTFDMSFESLELDFGSDIQEYIR 237 Query: 240 L-KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 K+ + S L + + + ++ + L P++ +I + + L Sbjct: 238 QSKSPREMTSAELKKKIASFSRLGVRTSSLMVALQEKYSLSLAPLVIVMIGVPLSLIFNL 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + + FI + I G S + + NP Y P + +F I+ I ++ Sbjct: 298 RSKSWSVILTFILIVIYQGSGAWLSAMGKEDLLNPAYAPWIPNIIFAITGIITYLL 353 >gi|308272621|emb|CBX29225.1| hypothetical protein N47_J02060 [uncultured Desulfobacterium sp.] Length = 409 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 64/365 (17%), Positives = 135/365 (36%), Gaps = 13/365 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 Y+ + I F ++ LF F+ + +IL NLV + SL + + Y+IP L Sbjct: 20 TIVSRYLFKEILSPFAINTLFFTFLFLMAKILFITNLVVNYNMSLPKIGLMLLYIIPNFL 79 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 V P M + + E++ + G S L+ PVL + I F+ Sbjct: 80 VFVIPMSVMMAILLTFLRFSSDNEIIALKTGGISIYGLLPPVLIFCFIGCILTFLISLYA 139 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSRD 180 P R +I++L+ + + L+E F D+ + ++K + + L +F+ D R Sbjct: 140 IPWGRLSIEKLTMEIAQSNFEIGLKERTFNDNFKDIMLYVNKVDLKKDELIDVFVEDGRS 199 Query: 181 TQTHKIYYAQSGSIDLDRQAI----ILNDGEVHRKSPISKDISIMKFKSYTLQTESANS- 235 A G + + + L DG +++ + +K ++ + F +Y + + N+ Sbjct: 200 EDMASTIIAPKGVLLFEENRLSFRLRLYDGVINQVNTKNKSVNSIGFDTYDINLDLKNAF 259 Query: 236 -----STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 + LL+ ++ + E HK+ + + G++S+ Sbjct: 260 SEMEKTGQRKNEKKMYFYELLD-YIDSFKIKNSRYYNALFELHKKFSVPFACFVLGILSV 318 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 + + + I + + + + P +I + + S Sbjct: 319 ALGTQLKSATRSFGLGLGLIFFLLYYLILSVGYALGETGFY-PPFIGMWAPNILIGSIGI 377 Query: 351 LLMIK 355 L I+ Sbjct: 378 YLFIR 382 >gi|302037951|ref|YP_003798273.1| putative YjgP/YjgQ family permease [Candidatus Nitrospira defluvii] gi|300606015|emb|CBK42348.1| putative Permease, YjgP/YjgQ family [Candidatus Nitrospira defluvii] Length = 361 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 56/363 (15%), Positives = 136/363 (37%), Gaps = 13/363 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI R + F +S + F+ ++L+ + L+ + +LK+ +L+P+ L Sbjct: 4 TILDRYIFRELFSPFGISLAALCFVMLTKELLRLVELLVTKGIGFLSVLKVFAHLLPSFL 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + T ++ + EL+ + G S + L + V A L+ + Sbjct: 64 VLTLPIAGIIATITAFGRLSLDKELVAMRAAGFSLLRLSQSVFIFAALVCGLTLVMAQYG 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 +P +K+++ L+ +F + I + +GIF+ D R+ Sbjct: 124 QPWSNVNLKKVALNLLRDELVLELDRGVFNEAIPKMTIYVPDAQEGQDNRGIFVADERNP 183 Query: 182 QTHKIYYAQSGSIDLDRQ----AIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 +I AQ + D A+ L +G +H + ++ + F SY L+ S Sbjct: 184 ADPRIIVAQQYQVMTDPASSQVALRLMNGVIHSRPQNPEEYQKISFTSYDLKLS---LSA 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + A ++ ++ + + E++K L ++F ++ + Sbjct: 241 SLYGAEERTPIDVIRAKLESTGWTDTNALRRLMEYYKDLAFPAASLVFCILGVPV---GI 297 Query: 298 LVRQRKKIHPIFISLSISFGVF---WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + ++ I + + + + +++ + +P+ L +F + +I Sbjct: 298 VSKRSGSIGGFAVGVLVVIAYYVINVACEFLVTTLWISPFAGAWLPNVIFTVVTILWFYR 357 Query: 355 KKK 357 + Sbjct: 358 VSR 360 >gi|310778171|ref|YP_003966504.1| permease YjgP/YjgQ family protein [Ilyobacter polytropus DSM 2926] gi|309747494|gb|ADO82156.1| permease YjgP/YjgQ family protein [Ilyobacter polytropus DSM 2926] Length = 357 Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 70/363 (19%), Positives = 142/363 (39%), Gaps = 12/363 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YIL+ + + FI + ++Q + + SL +++I + +P + Sbjct: 1 MKIIHRYILKEMRMPIIFGISLFTFIFLIDIMVQMMENIIVKGVSLLDVVRILSFYLPPI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P F + + + +E +++ G S ++IKP LA+ ++ F+F + Sbjct: 61 LSQTIPMGFFLGVMITYSKLTSTSESTAMNSMGMSLNSIIKPTFMLALGITAFVFFLQES 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P ++QL+ K L+EN++ DD I I K + + + I I Sbjct: 121 IIPNSFVKLQQLTLKIAYEKPAFQLKENMYIDEVDDYSIYIDKVGGDGSAENILIFKKEK 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSSTI 238 + ++ D A+IL D E + +P + +F + S N Sbjct: 181 DNSFPTVLTAKKAMWKDA-AMILEDAEFYNLNPDGSEKLRGEFSRQKIPINSFFENVKMK 239 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 V + ++ LL + + E Y E +K+L L + ++ I+ Sbjct: 240 VSEIETMSVRQLL---KESKDKDDEEKLPYIVEMNKKLAIPLSAI---MLGILGVLFSVG 293 Query: 299 VRQRKKIHPIFISLSISFGVFW---GFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + K ISL + F + ++ + +P+ F+ +I++ ++K Sbjct: 294 HHRSGKGVSYGISLGVIFLYIASLNVGVVMANRGKISPFIGIWTPNFVLLGLTIYMYLLK 353 Query: 356 KKY 358 K+ Sbjct: 354 KRR 356 >gi|153004268|ref|YP_001378593.1| permease YjgP/YjgQ family protein [Anaeromyxobacter sp. Fw109-5] gi|152027841|gb|ABS25609.1| permease YjgP/YjgQ family protein [Anaeromyxobacter sp. Fw109-5] Length = 370 Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 54/365 (14%), Positives = 123/365 (33%), Gaps = 9/365 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ Y+ + I F LF+ I Q+L + +++ S SL + + YL+P Sbjct: 1 MRLLHRYLAKEILLPFAAGLLFLTQILLATQLLAQADVLFGSGVSLVDVGAVVLYLLPYF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V P F + + + + E++ + G S L+ L + + ++ Sbjct: 61 LGYVLPIAFLLGAVLGVGRLAEDREVVALGAAGFSPAFLVPVPLAIGVAVAGLGLWLSLD 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ + + + + F+ + + + I D D Sbjct: 121 VVPRSLDAARLRLNEIVKRNVMNDVRPGTFYDQIPGYTLYA-ERVHGGRWGNVLISDRSD 179 Query: 181 TQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKS----YTLQTES 232 + A++G ++ ++L+DGEVHR+ + + + F+ L T Sbjct: 180 PAAPVLALARAGGLEPVGAGEEMRLVLDDGEVHREQVDADEYVLATFRRADVVLGLGTAL 239 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 ++ + + D H+R+ L + F L+++ Sbjct: 240 SDRNAVSRTGRDDLAGLQARVAEARAKGDAAAARRAEGSLHRRIASPLAVIPFALLAVPL 299 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 R R + ++ + G + P + + L L I+ + Sbjct: 300 GASRRAGRAFGVGATFLVVVAHYLLLRSGEVMAQRGVLPAPLALQLPTLVLSAIALALIA 359 Query: 353 MIKKK 357 + ++ Sbjct: 360 LQVRR 364 >gi|127511873|ref|YP_001093070.1| permease YjgP/YjgQ family protein [Shewanella loihica PV-4] gi|126637168|gb|ABO22811.1| permease YjgP/YjgQ family protein [Shewanella loihica PV-4] Length = 370 Score = 176 bits (447), Expect = 4e-42, Method: Composition-based stats. Identities = 70/356 (19%), Positives = 137/356 (38%), Gaps = 24/356 (6%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y++R + ++ + L ++ I ++ + S ++++ + G +P + +V Sbjct: 5 RYLIREVLKAQMAVLLVLLAIFISQHFVRVLADASDGEFPASLVMTLLGLNLPYLAVLVV 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + M +E+++ + G S + + L LA+ +F + P Sbjct: 65 PLSLFLGILVAHGRMYAESEMVVFHSVGVSEWYVTRVTLLLAVANMLFTGFLVIYVTPWA 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNNTLQGIFIVDSRDTQ-- 182 T ++ AQ + L + F + + + + +N L +F+ D + Sbjct: 125 EETQNRVLENAQSEAGLAALTQGRFQTSPNGRAVLFVERIGRDNQLDKVFVAQLPDPEDG 184 Query: 183 --THKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 I AQ GS+ D + LNDG ++ D +++F Y +Q + Sbjct: 185 ASQSNIVVAQGGSVIEDESGEQRLKLNDGIQYQSKQNQLDYQVVQFAGYEMQIKEQEVDQ 244 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 K + + LL+ E E +EFH RL L LI++ R Sbjct: 245 RRRKLSALPIDQLLD---------TEGPEAV-AEFHWRLAIPLAIPFMTLIAVP--MARV 292 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 VRQ K +F ++ + G F G K ++ IP YL ++ I + L + Sbjct: 293 NVRQGK-FAKMFPAILLYLGYF-GLMIAGRKALED-EVIPA-YLGMWWIHASALFL 344 >gi|51246435|ref|YP_066319.1| hypothetical protein DP2583 [Desulfotalea psychrophila LSv54] gi|50877472|emb|CAG37312.1| hypothetical protein DP2583 [Desulfotalea psychrophila LSv54] Length = 351 Score = 175 bits (445), Expect = 7e-42, Method: Composition-based stats. Identities = 70/319 (21%), Positives = 123/319 (38%), Gaps = 13/319 (4%) Query: 46 LNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLF 105 L IL S P + P + T + ++ + ELL + G S ++ PV Sbjct: 4 LQILSAYSPTSFPNIFLYTLPMASMLGITICFSRLSTDMELLALKAGGISIYKILPPVFL 63 Query: 106 LAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN 165 +A +++ F + P +K+LS + ++ + F D+ I + K + Sbjct: 64 VASAITLIAFYFSTQLIPASELAMKKLSYQILKEKIDQGIQAHKFTDAMGDIVIYVDKVD 123 Query: 166 PN-NTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQ----AIILNDGEVHRKSPISKDISI 220 +++ D R + I A+SGS+ + + I L DG +HR P + I Sbjct: 124 KETGDWHNVWVSDMRGVKQPTITMARSGSMKSNSKQMSITIKLTDGSLHR--PEEQGTEI 181 Query: 221 MKFKSYTLQ--TESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQ 278 + FK YT+ E+ + +L ++ LL N + Y EFHKRL Sbjct: 182 ITFKDYTINMPLETGGKNIFMLHKRLLSMPELLEQAKRWGNESKKRGRIYLIEFHKRL-- 239 Query: 279 WLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIP 337 + P+ ++S +A R KK I + L I + + E IP Sbjct: 240 -ILPIGCLMLSFLALPLGLQARPGKKAIGIPVGLGIFIVYYILHTVGKELAEAGTVPLIP 298 Query: 338 ILYLFLFCISSIFLLMIKK 356 L+L + + I + Sbjct: 299 ALWLPNVLFFLLAIFWIYR 317 >gi|120553894|ref|YP_958245.1| permease YjgP/YjgQ family protein [Marinobacter aquaeolei VT8] gi|120323743|gb|ABM18058.1| permease YjgP/YjgQ family protein [Marinobacter aquaeolei VT8] Length = 367 Score = 175 bits (444), Expect = 9e-42, Method: Composition-based stats. Identities = 72/376 (19%), Positives = 150/376 (39%), Gaps = 31/376 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y++R I S L ++ + + ++ + + + +L I GY P Sbjct: 1 MSIIFRYLIRQIMVSMLAVSGILLLVFMSGRFIKYLADAAEGEIAAGVLFAIMGYRFPGF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + M +E+ ++ G S L+ L A+ + + + + Sbjct: 61 LELILPLGLFIGILLAYGRMYLESEMTVLFACGVSEKQLLAKTLLGALPVMLVVGVMSLY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFR-LDDDLYIKISKYNPNNT-LQGIFIVD- 177 I P ++ + + + A F L F D + + LQG+FI + Sbjct: 121 ISPWGMKQVEHIFNEQRKATEFEMLAPGRFQDFTSGDRVTYTEALSDDKRQLQGVFIAEY 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 +D + + A+SGS +D + ++L DG + +P D ++ +F++Y L+ S Sbjct: 181 DKDGKGVTLITAESGSQFIDEETGSRFLVLEDGGRFQGAPGRLDYNVTEFEAYGLKIVSG 240 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + K ++ LS L N +NP R+ H R++ L I L+++ Sbjct: 241 QEGS---KELEEGLSTLALWNSDNPED--------RALLHWRISLPLIVPIVTLLAV--R 287 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI---EQNPYYIPILYLF-LFCISSI 349 R RQ + H + L + + G + E+ P ++ +L++ LF + Sbjct: 288 LSRVNPRQGRFFHLLPAMLV--YITYLGLLIVARDALADEKVPEWVGMLWVHALFLALGL 345 Query: 350 FL-----LMIKKKYTK 360 +L + +++ + Sbjct: 346 WLQFGPGWLNRRRLER 361 >gi|315223351|ref|ZP_07865210.1| YjgP/YjgQ family permease [Capnocytophaga ochracea F0287] gi|314946682|gb|EFS98671.1| YjgP/YjgQ family permease [Capnocytophaga ochracea F0287] Length = 495 Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats. Identities = 56/293 (19%), Positives = 121/293 (41%), Gaps = 19/293 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI+ +FL + +V I I I+ ++ L I+ K Y IP + Sbjct: 1 MKILDRYIITQFLTNFLGALSILVLIFVFHTIFTYIDELAGRGLELWIIFKFLIYFIPQL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P++ P + + + N E + +G S + +++P++ L LLS+ F N Sbjct: 61 IPIIMPLAVVIASIMTFGAFAENYEFAAMKASGISLMRVMRPLIILMALLSLGTFFLANN 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT--LQGIFIV-D 177 + P + L + + E +F + +D+ IK+ K +N L+ + I Sbjct: 121 VIPVAYREVYTLRSNIAKVKPAMAIAEGVFSNIGEDISIKVGKKRGDNDEFLENVLIHKK 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQ-----AIILNDGEVHR-------KSPISKDISIMKFKS 225 + D + A+ G + + +IL DG + ++ + + + FK Sbjct: 181 TPDKVNRTVINAKRGELKSSKTNSNFLQLILEDGTYYEDIKTNSYEAQQKEPFAKVYFKK 240 Query: 226 YTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQ 278 Y + + ++ + + ++ + N NY +++ R++F + +T Sbjct: 241 YIINLDLSHLNNVNFNEKTDATTYRM-MNVGQLNYA---IDSLRTDFKQNITD 289 Score = 39.6 bits (91), Expect = 0.70, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 37/97 (38%), Gaps = 9/97 (9%) Query: 256 NNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSIS 315 ++ YR +L+ + + + + VAA A +R+ P+ I++ + Sbjct: 362 SDLEYRYKLMNLHILNLSDKFALTVACFVLF---FVAAPLGAFIRKGGIGMPLVIAMILF 418 Query: 316 FGVFWGFSYIIHKIEQNPY------YIPILYLFLFCI 346 ++ ++ + E N +IP L L I Sbjct: 419 LAYYFIGMFMKNIAENNTINPALAPWIPALILLPLGI 455 >gi|256820290|ref|YP_003141569.1| permease YjgP/YjgQ family protein [Capnocytophaga ochracea DSM 7271] gi|256581873|gb|ACU93008.1| permease YjgP/YjgQ family protein [Capnocytophaga ochracea DSM 7271] Length = 495 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 56/293 (19%), Positives = 121/293 (41%), Gaps = 19/293 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI+ +FL + +V I I I+ ++ L I+ K Y IP + Sbjct: 1 MKILDRYIITQFLTNFLGALSILVLIFVFHTIFTYIDELAGRGLELWIIFKFLIYFIPQL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P++ P + + + N E + +G S + +++P++ L LLS+ F N Sbjct: 61 IPIIMPLAVVIASIMTFGAFAENYEFAAMKASGISLMRVMRPLIILMALLSLGTFFLANN 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT--LQGIFIV-D 177 + P + L + + E +F + +D+ IK+ K +N L+ + I Sbjct: 121 VIPVAYREVYTLRSNIAKVKPAMAIAEGVFSNIGEDISIKVGKKRGDNDEFLENVLIHKK 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQ-----AIILNDGEVHR-------KSPISKDISIMKFKS 225 + D + A+ G + + +IL DG + ++ + + + FK Sbjct: 181 TPDKVNRTVINAKRGELKSSKTNSNFLQLILEDGTYYEDIKTNSYEAQQKEPFAKVYFKK 240 Query: 226 YTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQ 278 Y + + ++ + + ++ + N NY +++ R++F + +T Sbjct: 241 YIINLDLSHLNNVDFNEKTDATTYRM-MNVGQLNYA---IDSLRTDFKQNITD 289 Score = 39.6 bits (91), Expect = 0.73, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 37/97 (38%), Gaps = 9/97 (9%) Query: 256 NNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSIS 315 ++ YR +L+ + + + + VAA A +R+ P+ I++ + Sbjct: 362 SDLEYRYKLMNLHILNLSDKFALTVACFVLF---FVAAPLGAFIRKGGIGMPLVIAMILF 418 Query: 316 FGVFWGFSYIIHKIEQNPY------YIPILYLFLFCI 346 ++ ++ + E N +IP L L I Sbjct: 419 LAYYFIGMFMKNIAENNTINPALAPWIPALILLPLGI 455 >gi|114562103|ref|YP_749616.1| permease YjgP/YjgQ family protein [Shewanella frigidimarina NCIMB 400] gi|114333396|gb|ABI70778.1| permease YjgP/YjgQ family protein [Shewanella frigidimarina NCIMB 400] Length = 370 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 69/364 (18%), Positives = 142/364 (39%), Gaps = 27/364 (7%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y++ + ++ L ++ I Q ++ + S ++++ + G +P + +V Sbjct: 5 RYLISEVLKAQFAVLLVLLTIFISQQFVRVLADASDGEFPASLVMTLLGLNLPQLTVLVL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P F + M E++++ G S + + L LA +F + P Sbjct: 65 PLSFFLAILLAHGRMYAENEMVVLHGVGVSEWYVTRVTLLLAFANLLFTAYLSVYVGPWA 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNNTLQGIFIVDSRDT--- 181 Q+ KAQ + L + F + + + K N +NTL +F+ D Sbjct: 125 EERQNQVLEKAQSEAGLAALTQGRFQASPNGRAVLFVEKINKDNTLDKVFVAQLPDPEDE 184 Query: 182 -QTHKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 I A G + D Q + L G ++ SP S ++ +++F Y ++ + Sbjct: 185 NGLTNIVVANKGRVIEDNIGSQQLQLEKGFRYQGSPKSLELQVIEFGGYKMEIKEQEVDE 244 Query: 238 IVLKANDQNLSFLLN-PNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 K + + LL+ P P +EF RL P+ L++++A Sbjct: 245 RRRKLSAMPIDELLDTPGPE-----------AAAEFQWRLA---IPIAIPLLTLIAVPLA 290 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN---PYYIPILYLFLFCISSIFLLM 353 + ++ K + ++ + G F G K Q+ P Y+ + ++ F + LL+ Sbjct: 291 RVNVRQGKFAKMGPAILLYLGYF-GLMIAGRKALQDEVVPQYLGMWWIHGFALLLGLLLL 349 Query: 354 IKKK 357 IK++ Sbjct: 350 IKER 353 >gi|298529508|ref|ZP_07016911.1| permease YjgP/YjgQ family protein [Desulfonatronospira thiodismutans ASO3-1] gi|298510944|gb|EFI34847.1| permease YjgP/YjgQ family protein [Desulfonatronospira thiodismutans ASO3-1] Length = 390 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 57/351 (16%), Positives = 140/351 (39%), Gaps = 14/351 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK I++ +G FL++ ++ + + +++ ++ + + ++K YL P+ Sbjct: 1 MKILHRQIIKEVGTIFLVTLASMLSLIVIGRMIDLKDIFVGQSIQILYVIKSFFYLGPSF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L MV P + M+ + EL + +G S +L+ L ++ F Sbjct: 61 LSMVIPIACMLSIFLCFLRMSSDRELTALQTSGISIRSLVLSPLLFSLGAMGFTLYVTLH 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 + ++ + + T ++ +F R+ D+ I + +P + L+ +FI D Sbjct: 121 LTSWGIDNFRETAVEMVREQTEVSMQPGVFHRMIPDMAIYVHNRDPGTSELKEVFISDDT 180 Query: 180 DTQTHKIYYAQSGSIDLDRQ----AIILNDGEVHRKSPISKDISIMKFKSYTLQT---ES 232 + A +G + D++ IL+DG ++R+ + S++ F Y L+ Sbjct: 181 VPEAPLTIVAPTGRMLSDKEEGMLYFILDDGRIYRQDQE--EHSLVSFGEYRLRLDLFSL 238 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + + K ++ L ++ E HKR + L +I + + A Sbjct: 239 LGDAGLRDKRPEEMSWGELQAYKDDAQADSRQYRLAVLEEHKRFSLPLACLI---LGLFA 295 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 ++ + + +++S F +++ ++ + + P L +++ Sbjct: 296 VPLGLTLQGLGRNWGLLLAMSC-FLIYYSLFTAVYGLGEAGTLNPDLAMWM 345 >gi|317153285|ref|YP_004121333.1| permease YjgP/YjgQ family protein [Desulfovibrio aespoeensis Aspo-2] gi|316943536|gb|ADU62587.1| permease YjgP/YjgQ family protein [Desulfovibrio aespoeensis Aspo-2] Length = 388 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 67/362 (18%), Positives = 145/362 (40%), Gaps = 14/362 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK I + + + F ++ ++ + + ++LQ +L S +L++ YL P Sbjct: 1 MKLLHRQIFKELLKLFGLTVACLLGLILIGRMLQLRSLFLSQNIGFFNILQLFFYLTPFF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++TP + M+ + EL + G S ++ + +L ++F F Sbjct: 61 LLLITPIATMLSVFLTFLRMSTDNELTALKANGVSLYRMLPAPIAFCVLCTLFTFFISMW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 K + + + L+ +F + + + + + L+ +F+ D Sbjct: 121 GLAWGMDMFKTSLYQFARSHSRFALQPGVFNKEFPGITFYAHQVDNDTGELKFVFVRDQS 180 Query: 180 DTQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTE---- 231 + + A I + I+ N G ++R+S +DI+I++F SY+++ + Sbjct: 181 ISGASVVVVAPEARIVSSPKTAEVHIVFNKGRIYRQS--GEDINILRFGSYSVRLDLGKL 238 Query: 232 SANSSTIVLKANDQNLSFL--LNPNPNN-PNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 + S KA D + L + +P+ P + L +E++KRLT L +I G+ Sbjct: 239 LGDFSFSEEKAKDMTFAALREIRNDPSIAPQQTAQFLRKVDTEYYKRLTLPLGCLILGMF 298 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 +I A +RQ+ + + + +F + P Y L+ + + Sbjct: 299 AIPIAYVFRGLRQQYGLLLSMGLFLLYYSMFSLSVSLGEAGAIAPVYGLWAPNILYVLVA 358 Query: 349 IF 350 +F Sbjct: 359 VF 360 >gi|294139610|ref|YP_003555588.1| hypothetical protein SVI_0839 [Shewanella violacea DSS12] gi|293326079|dbj|BAJ00810.1| conserved hypothetical protein [Shewanella violacea DSS12] Length = 370 Score = 173 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 64/356 (17%), Positives = 139/356 (39%), Gaps = 24/356 (6%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y++R + ++ + L ++ I ++ + S ++++ + G +P +L +V Sbjct: 5 RYLIREVLKAQIAVLLVLLAIFISQHFVRVLADASDGEFPASLVMTLLGLNLPYLLVLVI 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + M ++E++I+ G S + + L LA+ IF + + P Sbjct: 65 PLSLFLGILMAHGRMYADSEMVILHGVGVSEWYITRVTLLLAVGNMIFTAMLSVYVTPWA 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNNTLQGIFIVDSRDTQTH 184 Q+ AQ + + + F + + + + NN LQ +F+ D Sbjct: 125 EERQNQVLENAQSEAGLAAITQGRFQTSPNGRAVLFVERIGRNNELQKVFVAQLPDPDDE 184 Query: 185 K----IYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 I A+ G + D + L+DG ++ P D I++F Y +Q + Sbjct: 185 SGMSNIVVAEGGKVIEDDTGGQRLQLSDGVQYQARPKHVDFQIIEFGGYQMQIKEQPVDE 244 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 K + ++ L++ + +EFH RL L L++++A Sbjct: 245 RRRKLSAMPINDLMDID----------GPAATAEFHWRLAIPL---AIPLMTLIAVPMAR 291 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + ++ K +F ++ + G F G K ++ + YL ++ I + L + Sbjct: 292 VNVRQGKFAKMFPAILLYLGYF-GLMIAGRKALEDG--VVPEYLGMWWIHASALFL 344 >gi|220916596|ref|YP_002491900.1| permease YjgP/YjgQ family protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219954450|gb|ACL64834.1| permease YjgP/YjgQ family protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 371 Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats. Identities = 61/368 (16%), Positives = 137/368 (37%), Gaps = 13/368 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+ R I F + LF+ I QIL + +++ S SL + + L+P + Sbjct: 1 MGLIDRYLAREILLPFAAALLFLTQILLATQILGQADVLFGSGVSLVDVGLVMLSLMPHL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V P F + + + + E++ + G S + L++ L L ++++ Sbjct: 61 LGYVIPVAFLLGVVLGVGRLAEDREVVALGAAGLSPVRLVRVPLLLGLVVAALGAWLSLS 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP + + + + F+ I + + + I D + Sbjct: 121 VEPASIRAARLRLNEVVKRNVTNDVRGGTFYDQIPGYTIYA-ERARGGRWENVLIQDRSN 179 Query: 181 TQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKS----YTLQTES 232 + + G ++ ++L GEVHR+ + D + F L T Sbjct: 180 PDAPMLALSHRGRLEPVGAGQDMRLVLEQGEVHREEVGTADYASAAFGKAEILVGLGTAL 239 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSE--FHKRLTQWLFPVIFGLISI 290 ++ + + + + +S L + +++E R E H++L+ L V F L+ + Sbjct: 240 SDRNVLAKSSREATVSDLRA-RAAAAREKGDVVEARRQEGYLHRKLSAPLVVVAFALLGV 298 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 +R R + F+ + + + + G + + L + + I Sbjct: 299 PLGAERRGGR-AFGMGATFLLVVVHYLLLRGGEVLTQLGHLPAAFALQLPNLVLGAAGIG 357 Query: 351 LLMIKKKY 358 L+++ + Sbjct: 358 LVLLMARR 365 >gi|197121803|ref|YP_002133754.1| permease YjgP/YjgQ family protein [Anaeromyxobacter sp. K] gi|196171652|gb|ACG72625.1| permease YjgP/YjgQ family protein [Anaeromyxobacter sp. K] Length = 371 Score = 172 bits (437), Expect = 5e-41, Method: Composition-based stats. Identities = 59/367 (16%), Positives = 136/367 (37%), Gaps = 11/367 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+ R I F + LF+ I QIL + +++ S SL + + L+P + Sbjct: 1 MGLIDRYLAREILLPFAAALLFLTQILLATQILGQADVLFGSGVSLVDVGLVMLSLMPHL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V P F + + + + E++ + G S + L++ L L ++++ Sbjct: 61 LGYVIPVAFLLGVVLGVGRLAEDREVVALGAAGLSPVRLVRVPLLLGLVVAALGAWLSLS 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP + + + + F+ I + + + I D + Sbjct: 121 VEPASIRAARLRLNEVVKRNVTNDVRGGTFYDQIPGYTIYA-ERARGGRWENVLIQDRSN 179 Query: 181 TQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTE---SA 233 + ++ G ++ ++L GEVHR+ + D + F L + Sbjct: 180 PDAPMLALSRHGRLEPVGAGQDMRLVLEQGEVHREEVGTADYASAAFGKAELLVGLGTAL 239 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSE--FHKRLTQWLFPVIFGLISIV 291 + ++ K++ + L + +++E R E H++L+ L V F L+ + Sbjct: 240 SDRNVLAKSSREATVSDLRARAAAAREKGDVVEARRQEGYLHRKLSAPLVVVAFALLGVP 299 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 +R R + F+ + + + + G + + L + + L Sbjct: 300 LGAERRGGR-AFGMGATFLLVVVHYLLLRGGEVLTQLGHLPAAFALQLPNLVLGAVGVGL 358 Query: 352 LMIKKKY 358 +++ + Sbjct: 359 VLLMARR 365 >gi|146292282|ref|YP_001182706.1| permease YjgP/YjgQ family protein [Shewanella putrefaciens CN-32] gi|145563972|gb|ABP74907.1| permease YjgP/YjgQ family protein [Shewanella putrefaciens CN-32] gi|319425582|gb|ADV53656.1| inner membrane component of lipopolysaccharide transporter, LptF [Shewanella putrefaciens 200] Length = 370 Score = 172 bits (437), Expect = 6e-41, Method: Composition-based stats. Identities = 74/363 (20%), Positives = 146/363 (40%), Gaps = 25/363 (6%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y++R + ++ + L ++ I ++ + S ++++ + G IP ++ +V Sbjct: 5 RYLIREVFKAQIAVLLVLLTIFISQHFVRILADASDGEFPASLIVTLIGLNIPALVVLVL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + M E++I+ G S + + L LA++ +F + P Sbjct: 65 PLSLFLGILVAHGRMYSENEMVILHGVGVSEWYVTRVTLILAVVNMLFTGYLSLYVTPWA 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNNTLQGIFIVDSRDT--- 181 Q+ KAQ + L + F + + + + +N L+ +F+ D Sbjct: 125 EEQQNQVLEKAQSEAGLAALVQGRFQASPNGRAVLFVERIGKDNELEKVFVAQLPDPSDE 184 Query: 182 -QTHKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A++G + D Q + LN+G ++ SP KD +++F Y +Q + Sbjct: 185 TGVTNVVVAKNGRVLEDNMGAQQLQLNNGVRYQGSPRLKDYQMIEFGGYKMQIKEQQVDE 244 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 K + ++ LL + E E +EFH RL L I LI++ A R Sbjct: 245 RRRKLSALTVTDLL---------KVESAEAV-AEFHWRLAIPLAIPIMTLIAVPLA--RV 292 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN---PYYIPILYLFLFCISSIFLLMI 354 VRQ K + ++ + G F G K Q+ P Y+ + ++ L + L+ Sbjct: 293 NVRQGK-FAKMLPAVLLYLGYF-GLMVAGRKALQDGVIPQYLGMWWIHLSALIMGIFLLG 350 Query: 355 KKK 357 K + Sbjct: 351 KDR 353 >gi|86158887|ref|YP_465672.1| permease YjgP/YjgQ [Anaeromyxobacter dehalogenans 2CP-C] gi|85775398|gb|ABC82235.1| permease YjgP/YjgQ [Anaeromyxobacter dehalogenans 2CP-C] Length = 371 Score = 172 bits (437), Expect = 7e-41, Method: Composition-based stats. Identities = 59/367 (16%), Positives = 136/367 (37%), Gaps = 11/367 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+ R I F + LF+ I QIL + +++ S SL + + L+P + Sbjct: 1 MGLIDRYLAREILLPFAAALLFLTQILLATQILGQADVLFGSGVSLVDVGLVMLSLMPHL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V P F + + + + E++ + G S + L++ L L ++++ Sbjct: 61 LGYVIPVAFLLGVVLGVGRLAEDREVVALGAAGLSPVRLVRVPLLLGLVVAALGAWLSLS 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP + + + F+ I + + + I D + Sbjct: 121 VEPASIRAARLRLNDVVKRNVTNDVRGGTFYDQIPGYTIYT-ERARGGRWENVLIQDRSN 179 Query: 181 TQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTE---SA 233 + ++ G ++ ++L GEVHR+ + D + F L + Sbjct: 180 PDAPMLALSRRGRLEPVGAGQDMRLVLEQGEVHREEVGTADYASAAFGKAELLVGLGTAL 239 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSE--FHKRLTQWLFPVIFGLISIV 291 + ++ K++ + L + +++E R E H++L+ L V F L+ + Sbjct: 240 SDRNVLAKSSREATVSDLRARAAAAREKGDVVEERRQEGYLHRKLSAPLVVVAFALLGVP 299 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 +R R + F+ + + + + G + + L + + + L Sbjct: 300 LGAERRGGR-AFGMGATFLLVVVHYLLLRGGEVLTQLGHLPAAFALQLPNLVLGAAGVAL 358 Query: 352 LMIKKKY 358 +++ + Sbjct: 359 VLLMARR 365 >gi|91792232|ref|YP_561883.1| permease YjgP/YjgQ [Shewanella denitrificans OS217] gi|91714234|gb|ABE54160.1| permease YjgP/YjgQ [Shewanella denitrificans OS217] Length = 370 Score = 172 bits (436), Expect = 7e-41, Method: Composition-based stats. Identities = 59/363 (16%), Positives = 138/363 (38%), Gaps = 25/363 (6%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y++ + ++ L ++ I Q ++ + S+ +++L + G +P + ++ Sbjct: 5 RYLIAEVLKAQFAVLLVLLTIFISQQFVRVLADASNGEFPASLVLTLLGLNLPQLTLLIL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P F + M E++++ + G S + + L +A+ +F + + P Sbjct: 65 PLSFFLGILLAHGRMYAENEMVVLHSVGVSEWYVARVTLLIALANLVFTCVLSMYVSPWA 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNNTLQGIFIVDSRDTQT- 183 Q+ KAQ + L + F + + + K + +N L +F+ D Sbjct: 125 EERQNQVLEKAQSEAGLAALVQGRFQASPNGRAVLFVEKISKDNQLSKVFVAQLPDPDDK 184 Query: 184 ---HKIYYAQSGSIDLD---RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + AQ G + D Q + L G ++ SP +++F Y ++ + Sbjct: 185 EGMSNVVVAQQGRVIEDSIGSQQLQLERGVRYQGSPQGLAYQVIEFGGYRMEIKEQEVDE 244 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 K + ++ L +EFH R L L++++A Sbjct: 245 RRRKLSALSMEQL----------NDTQGPEAAAEFHWRFAIPL---SIPLLTLIAVPLAR 291 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN---PYYIPILYLFLFCISSIFLLMI 354 + ++ K +F ++ + G F G K ++ P Y+ + ++ + + L+ Sbjct: 292 VNVRQGKFAKMFPAILLYLGYF-GLMIAGRKALEDEVIPEYLGMWWIHISVLLMGVFLLG 350 Query: 355 KKK 357 K++ Sbjct: 351 KER 353 >gi|114048399|ref|YP_738949.1| permease YjgP/YjgQ family protein [Shewanella sp. MR-7] gi|113889841|gb|ABI43892.1| permease YjgP/YjgQ family protein [Shewanella sp. MR-7] Length = 370 Score = 172 bits (436), Expect = 8e-41, Method: Composition-based stats. Identities = 74/363 (20%), Positives = 145/363 (39%), Gaps = 25/363 (6%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y++R + ++ + ++ I ++ + S +++ + G +P ++ +V Sbjct: 5 RYLIREVLKAQIAVLFVLLTIFISQHFVRILADASDGEFPASLIATLIGLNLPYLVVLVL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + M E++I+ G S + + L LA++ +F + P Sbjct: 65 PLSLFLGILMAHGRMYAENEMVILHGVGVSEWYVTRVTLILALINMLFTGYLSLYVAPWA 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNNTLQGIFIVDSRDTQT- 183 Q+ KAQ + L + F + + + + +N L +F+ D Sbjct: 125 EEQQNQVLEKAQSEAGLAALVQGRFQASPNGRAVLFVERIGKDNELDKVFVAQLPDPNDE 184 Query: 184 ---HKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G + D+ Q + LNDG ++ SP KD +++F Y +Q + Sbjct: 185 IGLTNVVVAKGGRVQEDQNGSQQLHLNDGVRYQGSPQQKDYQMIEFGGYKMQIKEQQVDE 244 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 K + +L+ L+ + E E +EFH RL L I LI++ A R Sbjct: 245 RRRKLSALSLADLM---------KVEGPEAV-AEFHWRLAIPLAIPIMTLIAVPLA--RV 292 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN---PYYIPILYLFLFCISSIFLLMI 354 VRQ K + ++ + G F G K Q+ P Y+ + ++ L + LL+ Sbjct: 293 NVRQGK-FAKMLPAVLLYLGYF-GLMVAGRKALQDGVIPQYLGMWWIHLSALIMGILLLG 350 Query: 355 KKK 357 K + Sbjct: 351 KDR 353 >gi|24372947|ref|NP_716989.1| hypothetical protein SO_1369 [Shewanella oneidensis MR-1] gi|24347090|gb|AAN54434.1|AE015581_1 conserved hypothetical protein [Shewanella oneidensis MR-1] Length = 370 Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 75/356 (21%), Positives = 140/356 (39%), Gaps = 24/356 (6%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y++R + ++ + ++ I ++ + S +++ + G +P ++ +V Sbjct: 5 RYLIREVLKAQIAVLFVLLTIFISQHFVRILADASDGEFPASLIATLIGLNLPYLVVLVL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + M E++I+ G S + + L LA++ +F + P Sbjct: 65 PLSLFLGILMAHGRMYAENEMVILHGVGVSEWYVTRVTLILAVINMLFTGYLSLYVAPWA 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNNTLQGIFIVDSRDTQT- 183 Q+ KAQ + L + F + + + + +N L+ +F+ D Sbjct: 125 EEQQNQVLEKAQSEAGLAALVQGRFQASPNGRAVLFVERIGKDNELEKVFVAQLPDPNDE 184 Query: 184 ---HKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G + D+ Q + LNDG ++ SP KD +++F Y +Q + Sbjct: 185 IGLTNVVVAKGGRVIEDQNGSQQLQLNDGVRYQGSPQQKDYQMIEFGGYKMQIKEQQVDE 244 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 K + L LL + +EFH RL L I LI++ A R Sbjct: 245 RRRKLSALPLGELLKID----------GPEAVAEFHWRLAIPLAIPIMTLIAVPLA--RV 292 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 VRQ K + ++ + G F G K Q+ IP LYL ++ I L+M Sbjct: 293 NVRQGK-FAKMLPAVLLYLGYF-GLMVAGRKALQDG-VIP-LYLGMWWIHLSALIM 344 >gi|213963082|ref|ZP_03391340.1| permease YjgP/YjgQ family protein [Capnocytophaga sputigena Capno] gi|213954166|gb|EEB65490.1| permease YjgP/YjgQ family protein [Capnocytophaga sputigena Capno] Length = 508 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 57/293 (19%), Positives = 123/293 (41%), Gaps = 19/293 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI+ ++FL + ++ I I I+ ++ L I+ K Y IP + Sbjct: 1 MKIIDRYIITQFLKNFLGALSILILIFVFHTIFTYIDELAGRGLELWIIFKFLIYFIPQL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P++ P + + S + E + +G S + +++P++ L LLSI F N Sbjct: 61 IPIIMPLAVVIASIMTFGSFAESYEFAAMKASGISLMRVMRPLIILMALLSIGTFFLANN 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT--LQGIFIV-D 177 + P + L + + E +F + +D+ IK+ K + +N L+ + I Sbjct: 121 VIPVAYREVYTLRSNIAKVKPAMAIAEGVFSNIGEDISIKVGKKSGDNDQFLESVLIHKK 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQ-----AIILNDGEVHR-------KSPISKDISIMKFKS 225 + D + A+ G + + +IL DG + ++ + + FK Sbjct: 181 TPDRVNRTVINAKRGELKSAKSNPNFLQLILEDGTYYEDIKTNTYETQQKMPFAKVHFKK 240 Query: 226 YTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQ 278 Y + + ++ + + ++ + N N +Y +++ RS+F + +T Sbjct: 241 YVINLDLSHLNNVDFNEKSDATTYRM-MNVNQLDYA---IDSLRSDFKQNITD 289 Score = 37.6 bits (86), Expect = 2.9, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 37/97 (38%), Gaps = 9/97 (9%) Query: 256 NNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSIS 315 ++ YR +L+ + + + + VAA AL+R+ P+ ++ + Sbjct: 364 SDLEYRYKLMNLHIMNLSDKFALTIACFVLF---FVAAPLGALIRKGGIGLPLVFAMILF 420 Query: 316 FGVFWGFSYIIHKIEQNPY------YIPILYLFLFCI 346 ++ ++ + E N +IP L L I Sbjct: 421 LSYYFIGMFMKNIAENNTINPALAPWIPALILMPLGI 457 >gi|296115281|ref|ZP_06833921.1| putative permease [Gluconacetobacter hansenii ATCC 23769] gi|295978184|gb|EFG84922.1| putative permease [Gluconacetobacter hansenii ATCC 23769] Length = 406 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 65/370 (17%), Positives = 143/370 (38%), Gaps = 11/370 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + Y+L+ + F +S ++ + ++L NL++S+ S+ + + L+P L Sbjct: 11 GTLDHYLLQQVTPPFSISLGVVMAALLLERLLALFNLLASNGSSMKTFVSLLTDLVPHYL 70 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + +V+ M++N E+ + +G S + +P + + +L + F I Sbjct: 71 GLALPAAMCVSVFSVIRRMSQNHEIDALMASGVSMFRIARPFIVVGAILGVLSFSLYGFI 130 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSRD 180 +P R + A + +L+ ++F DL + K + + +FI D+ + Sbjct: 131 QPYARYNYRSALYFASHSGWAPHLQSHMFAAPSHDLMLTAEKVDDAGSRMFKVFIRDNSN 190 Query: 181 TQTHKIYYAQSGSI----DLDRQAIILNDGEVHRKSPISKDISIMKFKSYT--LQTESAN 234 + A+ G + D D+ + L DG + K S++ F T + Sbjct: 191 HDLTRYITARKGYLYIPNDEDKIRLDLIDGTII-TDRHDKSPSVIHFDHTTELFSPHAQL 249 Query: 235 SSTIVLKANDQNLSFLLNPN--PNNPNYRPELLETYR-SEFHKRLTQWLFPVIFGLISIV 291 + Q L P + P + +Y +E H RL + L L++ Sbjct: 250 DKLKAYRTRGQTERELTLPELYRGIRHGMPGIKHSYLVAELHFRLARTLAIPFIPLLACA 309 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 A ++ + I+L ++ + +P + L +F I ++ Sbjct: 310 LAVMAKRQKRSLGLPIAAIALVGFDHTLQMGLSLVANVHMSPLLVIWLPTLVFGIGCVWA 369 Query: 352 LMIKKKYTKI 361 L+ + +I Sbjct: 370 LIWRCGGIRI 379 >gi|120599782|ref|YP_964356.1| permease YjgP/YjgQ family protein [Shewanella sp. W3-18-1] gi|120559875|gb|ABM25802.1| permease YjgP/YjgQ family protein [Shewanella sp. W3-18-1] Length = 370 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 73/363 (20%), Positives = 146/363 (40%), Gaps = 25/363 (6%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y++R + ++ + L ++ I ++ + S ++++ + G IP ++ +V Sbjct: 5 RYLIREVFKAQIAVLLVLLTIFISQHFVRILADASDGEFPASLIVTLIGLNIPALVVLVL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + M E++I+ G S + + L LA++ +F + P Sbjct: 65 PLSLFLGILVAHGRMYSENEMVILHGVGVSEWYVTRVTLILAVVNMLFTGYLSLYVTPWA 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNNTLQGIFIVDSRDT--- 181 Q+ KAQ + L + F + + + + +N L+ +F+ + Sbjct: 125 EEQQNQVLEKAQSEAGLAALVQGRFQASPNGRAVLFVERIGKDNELEKVFVAQLPEPSDE 184 Query: 182 -QTHKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A++G + D Q + LN+G ++ SP KD +++F Y +Q + Sbjct: 185 TGVTNVVVAKNGRVLEDNMGAQQLQLNNGVRYQGSPRLKDYQMIEFGGYKMQIKEQQVDE 244 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 K + ++ LL + E E +EFH RL L I LI++ A R Sbjct: 245 RRRKLSALTVTDLL---------KVESAEAV-AEFHWRLAIPLAIPIMTLIAVPLA--RV 292 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN---PYYIPILYLFLFCISSIFLLMI 354 VRQ K + ++ + G F G K Q+ P Y+ + ++ L + L+ Sbjct: 293 NVRQGK-FAKMLPAVLLYLGYF-GLMVAGRKALQDGVIPQYLGMWWIHLSALIMGIFLLG 350 Query: 355 KKK 357 K + Sbjct: 351 KDR 353 >gi|113971161|ref|YP_734954.1| permease YjgP/YjgQ family protein [Shewanella sp. MR-4] gi|117921444|ref|YP_870636.1| permease YjgP/YjgQ family protein [Shewanella sp. ANA-3] gi|113885845|gb|ABI39897.1| permease YjgP/YjgQ family protein [Shewanella sp. MR-4] gi|117613776|gb|ABK49230.1| permease YjgP/YjgQ family protein [Shewanella sp. ANA-3] Length = 370 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 74/363 (20%), Positives = 144/363 (39%), Gaps = 25/363 (6%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y++R + ++ + ++ I ++ + S +++ + G +P ++ +V Sbjct: 5 RYLIREVLKAQIAVLFVLLTIFISQHFVRILADASDGEFPASLIATLIGLNLPYLVVLVL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + M E++I+ G S + + L LA++ +F + P Sbjct: 65 PLSLFLGILMAHGRMYAENEMVILHGVGVSEWYVTRVTLILAVINMLFTGYLSLYVAPWA 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNNTLQGIFIVDSRDTQT- 183 Q+ KAQ + L + F + + + + +N L +F+ D Sbjct: 125 EEQQNQVLEKAQSEAGLAALVQGRFQASPNGRAVLFVERIGKDNDLDKVFVAQLPDPNDE 184 Query: 184 ---HKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G + D+ Q + LNDG ++ SP KD +++F Y +Q + Sbjct: 185 IGLTNVVVAKGGRVLEDQNGSQQLQLNDGVRYQGSPQQKDYQMIEFGGYKMQIKEQQVDE 244 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 K + L+ L+ + E E +EFH RL L I LI++ A R Sbjct: 245 RRRKLSALPLTELM---------KVEGPEAV-AEFHWRLAIPLAIPIMTLIAVPLA--RV 292 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN---PYYIPILYLFLFCISSIFLLMI 354 VRQ K + ++ + G F G K Q+ P Y+ + ++ L + LL+ Sbjct: 293 NVRQGK-FAKMLPAVLLYLGYF-GLMVAGRKALQDGVIPQYLGMWWIHLSALIMGILLLG 350 Query: 355 KKK 357 K + Sbjct: 351 KDR 353 >gi|301168145|emb|CBW27733.1| putative permease [Bacteriovorax marinus SJ] Length = 382 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 61/383 (15%), Positives = 135/383 (35%), Gaps = 27/383 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K + Y+ F MS F V Q+ + I +V S +++ ++ G++ + Sbjct: 2 LKLTQRYLAVNFIAPFTMSLFFFVAFLLTFQLFRIIKIVISKGVEWSLVFELMGHIAISF 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +PM P T L ++ ++E++ + + G ++ L P L A+ + ++ N Sbjct: 62 IPMAVPLSCLFATIYTLNKLSDDSEIVAMRSFGMTKSKLFLPFLISALFIGACIYSLNNK 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISK-YNPNNTLQGIFIVDSR 179 + P ++ K + + ++E FF + + + + +FI Sbjct: 122 VIPASKTQFKNTIIRLTSRGVLTDIKEGQFFTEVAGVTLFADTVIDKGRKMYNVFIQQEG 181 Query: 180 DTQ-THKIYYAQSGSIDLDRQ--------AIILNDGEV-HRKSPISKDISIMKFKSYTLQ 229 ++ A+ G++ + + L DG + R +KD+ + FK Y Sbjct: 182 KGNLLEQVVTAKEGALIKIKNEEWSIPSVRLHLTDGTIVKRFKDTNKDLEKILFKEYDFP 241 Query: 230 TESANS-----------STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQ 278 S + + L++ + + L + R + + E R+ Sbjct: 242 LASGGAVNNFVTKDGMRTNAELRSEIKKATALAVKKKLSRKDRERSMAKTKLELWSRINT 301 Query: 279 WLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN--PYYI 336 L +F LI K + K + +L + G + F + + P Y+ Sbjct: 302 PLLCFVFILIGFSLGIKHG---RGKSKNSSGRALFVLLGYYSLFFLGVSFARKGIVPAYV 358 Query: 337 PILYLFLFCISSIFLLMIKKKYT 359 + + S K + Sbjct: 359 VVFAPTIILASIGAYFYKKLDWA 381 >gi|242279362|ref|YP_002991491.1| permease YjgP/YjgQ family protein [Desulfovibrio salexigens DSM 2638] gi|242122256|gb|ACS79952.1| permease YjgP/YjgQ family protein [Desulfovibrio salexigens DSM 2638] Length = 386 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 58/364 (15%), Positives = 128/364 (35%), Gaps = 14/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK I + + F +S + + + ++LQ +L + + K+ YL P Sbjct: 1 MKLLHRNIFKELISIFTLSISGFMGLILIGRLLQFRDLFMGQSLGALEMAKLFMYLCPFF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+TP + MN + E+ + + G S L+ + +L + F Sbjct: 61 LLMLTPIATMLSIFLTFLRMNADNEITALKSGGLSLYRLLPAPIIFCLLCTGADFYFSLY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 + + + ++ +F + L + + ++ +F+ D+ Sbjct: 121 GLSWGTENFRNALMEFARTQSQLAIQPGVFNKNFPGLVFYADGVDEKSGIMRSVFVRDNT 180 Query: 180 DTQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 A G I D + I L +G+++++ +S++KFK+Y ++ AN Sbjct: 181 RKGMTATIVAPLGEIRTDPKMGRLLIHLENGKIYQQEKDQ--LSVLKFKNYDVRIPLANI 238 Query: 236 ----STIVLKANDQNLSFLLNPNPNNPNYRPELLETYR---SEFHKRLTQWLFPVIFGLI 288 L+ + + L+ + ++ E KRL + ++ G+ Sbjct: 239 LKGYDVDELRPKEMSWKKLVRISRAGDRAGDIDPGFFKKVQVEVQKRLALPVACLVLGMF 298 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 ++ A ++Q+ + + + + P L F I S Sbjct: 299 AVPIACIFRGLKQQYGLIISMGLFLVYYTMLSLGVTFGESGVLTPVIGLWLPNITFAIIS 358 Query: 349 IFLL 352 + LL Sbjct: 359 VVLL 362 >gi|317486217|ref|ZP_07945051.1| permease YjgP/YjgQ family protein [Bilophila wadsworthia 3_1_6] gi|316922516|gb|EFV43768.1| permease YjgP/YjgQ family protein [Bilophila wadsworthia 3_1_6] Length = 385 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 47/363 (12%), Positives = 117/363 (32%), Gaps = 12/363 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + I + I F+++ ++ + + + +Q L + + + GY+ P L Sbjct: 3 SLLQRQIFKEIANLFVLAVGVLLTLILISRAVQMRELFLGLDLGILDTVLLFGYMTPLFL 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 +V P + M+ + EL+ + G + ++ L +++ + Sbjct: 63 MLVIPIACMLSVFLTFLRMSTDRELVALRAGGINIYQMLPAPLLFSVICMLLTLWVSLHW 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRD 180 ++ + ++ +F +L + + NP + + + + D Sbjct: 123 LAWGMGHFRETILEIANTRARVVVQPGVFNTDFPNLVLFARQVNPGDGDMSQVLVDDRSH 182 Query: 181 TQTHKIYYAQSGSIDLDRQ----AIILNDGEVHRKSPISKDISIMKFKSYT----LQTES 232 + H A G D D + +L DG+++ + K S++ F Y L + Sbjct: 183 PERHMTILAPEGRFDTDTERGELVFLLEDGKIY--TTDKKGASVLAFDEYKVRLPLDSLF 240 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPN-YRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 + ++ + + S L + E HKR + + L + Sbjct: 241 KSLDLGDVRPREMSWSKLSSITREEALKVDANYANKLEVERHKRWAYPVACIALTLFVLP 300 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 A + ++ + + + + P + LF I+ Sbjct: 301 LASAFEGLHRQTGLMLALAMFFVYYSLMSLGFSTGESGAIPPSIGLWVPNILFLCLGIYG 360 Query: 352 LMI 354 L + Sbjct: 361 LWL 363 >gi|258542689|ref|YP_003188122.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-01] gi|256633767|dbj|BAH99742.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-01] gi|256636826|dbj|BAI02795.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-03] gi|256639879|dbj|BAI05841.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-07] gi|256642935|dbj|BAI08890.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-22] gi|256645990|dbj|BAI11938.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-26] gi|256649043|dbj|BAI14984.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-32] gi|256652030|dbj|BAI17964.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655087|dbj|BAI21014.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-12] Length = 399 Score = 169 bits (428), Expect = 7e-40, Method: Composition-based stats. Identities = 70/359 (19%), Positives = 142/359 (39%), Gaps = 18/359 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + Y++ + FL++ ++ + ++L NL+++ + I + + L+P L Sbjct: 21 GTLDRYLIAQVMPPFLVALSVVMIALILERLLVLFNLLAAGNNHIGIFIGLLAALLPHYL 80 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + V+ M++N E+ I+++G S + + +P + L ++L + F+ I Sbjct: 81 GLAIPAALCVAVFTVIRRMSQNEEIDAINSSGLSLLRITRPYIQLGVILGVLSFLLYGFI 140 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSRD 180 +P R + A L+ +F L I K + + + L+ +FI D + Sbjct: 141 QPHARYDFRSTFYIASHTGWAPRLQPRMFASPSSQLTIVADKVSQSGSDLENVFIRDLSE 200 Query: 181 TQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 Q A++G I + I L +G + S++ F T A S Sbjct: 201 QQERD-ITARNGHIRIGSDGETVEIDLTNGVIV-TDKGDGVPSLVTFDHSTRYLTHA-SH 257 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPEL---LETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + ++ L +P R + RSE H R+ + L L++ A Sbjct: 258 ISPFRTRGEDERELTSPELVGRLIRHDPSISRPHMRSEVHFRMARSLTVPFMPLLAASLA 317 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 R RQR L ++F + GF +II L ++ + +F++ Sbjct: 318 LMRK--RQRNN-----AGLPLAFIIMVGFDHIIQFGHSMVATKKASLLLIWGPAVVFIV 369 >gi|86608831|ref|YP_477593.1| YjgP/YjgQ family protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557373|gb|ABD02330.1| putative membrane protein, YjgP/YjgQ family [Synechococcus sp. JA-2-3B'a(2-13)] Length = 370 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 60/361 (16%), Positives = 134/361 (37%), Gaps = 10/361 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 E Y+ + L + V ++ + + +L++ +P ++ Sbjct: 10 LLERYLFGEMLTPVLAGVAGGTLLLLVGRLFTLAERLVEGSVPPLTVLRLLVLDLPEMVV 69 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P T L ++ N+E+ + G + +P+L + + +S+ F N++ Sbjct: 70 LGMPIAAFFATMLTLGKLSGNSEITAMRAAGIPFSRIFRPLLLVGLAMSLSAFFISNVLL 129 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFI---VDS 178 P + I+Q+ +A LA + ++ ++FF+ +D+L+ I + +P NT+Q + I Sbjct: 130 PASKQQIRQIDQQALLAQATTPVQYDVFFKTEDNLWFFIRQVDPRLNTMQDVTILRVDPL 189 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS-- 236 + + + + L++G H P I+ F LQ ++ Sbjct: 190 PGGKYQLVEVTLAAQAVWNGLEWSLSEGATHLYGPTGLSIAEQTFHRKPLQVSQDLAALM 249 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + ++ +L L + + R+EFH R + L LIS+ Sbjct: 250 QPPVPPSELSLPEL-AERISRLARSNLNTQALRTEFHMRFSLPLASFFAVLISLPLGST- 307 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIE-QNPYYIPILYLFLFCISSIFLLMIK 355 R+ + + + + FG + S E + F I L+++ Sbjct: 308 -TARRVGRYGGVVFGILLVFGYYVVLSVSRSLGEVGALPPWAAAWSFNILFGGIGLVLLA 366 Query: 356 K 356 + Sbjct: 367 R 367 >gi|332876989|ref|ZP_08444742.1| permease, YjgP/YjgQ family [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332685097|gb|EGJ57941.1| permease, YjgP/YjgQ family [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 491 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 55/293 (18%), Positives = 118/293 (40%), Gaps = 19/293 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL +FL + +V I I I+ ++ L I+ K Y IP + Sbjct: 1 MKILDRYILTQFLTNFLGALSILVLIFVFHTIFTYIDELAGRGLELWIIGKFLIYFIPQL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P++ P + + + N E + +G S + ++ P++ L LLSI F N Sbjct: 61 IPIIMPLAVVISSIMTFGAFAENYEFAAMKASGISLMRVMLPLIVLMALLSIGTFFLANN 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT--LQGIFIV-D 177 + P + L + + E +F + +D+ IK++K + +N L + I Sbjct: 121 VIPVAYREVYTLRSNIAKVKPAMAISEGVFSNIGEDISIKVAKKSGDNDQFLHNVLIHKK 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQ-----AIILNDGEVHRKSPISK-------DISIMKFKS 225 + D + +A+ G + + +IL DG + + + + F+ Sbjct: 181 TPDRVNRTVIFAKKGELKTAKTNSNFLQLILEDGTYYEDIKTNSYEAQERLPFAKVHFQK 240 Query: 226 YTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQ 278 Y + + ++ + + ++ + N +++ R++F + +T Sbjct: 241 YIINLDLSHLNNVDFNEKTDATTYRMM----NVGQLGYAIDSLRTDFKQNITD 289 Score = 40.7 bits (94), Expect = 0.34, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 38/97 (39%), Gaps = 9/97 (9%) Query: 256 NNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSIS 315 N+ YR +L+ + + + + VAA A +R+ P+ +++ + Sbjct: 360 NDLEYRYKLMNLHILNLSDKFALTVACFVLF---FVAAPLGAFIRKGGIGLPLVVAMIVF 416 Query: 316 FGVFWGFSYIIHKIEQNPY------YIPILYLFLFCI 346 ++ ++ + E N +IP L L F + Sbjct: 417 LAYYFIGMFMKNIAENNTINPALAPWIPALILLPFGV 453 >gi|299138457|ref|ZP_07031636.1| permease YjgP/YjgQ family protein [Acidobacterium sp. MP5ACTX8] gi|298599703|gb|EFI55862.1| permease YjgP/YjgQ family protein [Acidobacterium sp. MP5ACTX8] Length = 785 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 59/365 (16%), Positives = 137/365 (37%), Gaps = 16/365 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ F YILR + L+ + FI ++ +L + L S +L++ GYL+P Sbjct: 1 MRIFTRYILREVVGYALLGGVLFTFILFMRYLLALMELAVHGAASFADILRLIGYLLPYF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L+ + ++E+ + +G ++ ++ V +A+L ++ Sbjct: 61 LTLTIPMAVLIGILLGLSRLAADSEITAMRASGMGVLSFVRIVSIVAVLSWAVGLVNSLY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN---TLQGIFIVD 177 + P+ + + Q A+ ++ +F+ + + + P + + +F+ D Sbjct: 121 VAPRAAAALLQYEAQGASGEAAIQVQPRVFYEDFKNYVLYVQDVVPGSGAAEWKNVFLAD 180 Query: 178 SRDTQTHKIYYAQSGSID---LDRQAIILN--DGEVHRKSPISKD-ISIMKFKSYTLQTE 231 T I +Q + D Q + + DG H + + + I F S L + Sbjct: 181 LTQPATPHIITSQEALVTGTPGDPQTLRMQLSDGSRHDIAGNNPNQYDISTFASTELPIQ 240 Query: 232 SANSSTIV-LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 + + D + L + + Y E H+R + ++ L+ + Sbjct: 241 TGQQEEDSHISRRDTPIQALSMGELWKFAHGSGDTQPYFIELHRRFSYPAACLVLMLVGV 300 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCIS 347 ++ K I+L + F + S + + + + + +F ++ Sbjct: 301 ---PLGLSSKRGGKGTGFAITLVLVFAYYILSFVGSALARQGKLSAFAGVWGANIIFGVA 357 Query: 348 SIFLL 352 + LL Sbjct: 358 GVLLL 362 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 54/372 (14%), Positives = 124/372 (33%), Gaps = 25/372 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y++ R+F + +V + + + I + L + + LIP +L Sbjct: 420 ILDEYVMGSFLRNFGLVLTSLVGLFLIFTFFELIGDIIKYRTPLVTVGEYLLNLIPFILY 479 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 VTP C + +++R +EL + TG S + PVL +A+ LS LF + Sbjct: 480 NVTPLCSLVAVLITFGALSRTSELTAMKATGVSLYRIATPVLLVALALSAILFAFDETYL 539 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENL-------FFRLDDDLYIKISKYNPN-NTLQGIF 174 P + L + + ++L + + ++ + N + Sbjct: 540 PAANRKQEALRSVIKGKPAQTFLRADRKWMSGQTLGNKEPTRIFYYQFFDSDKNVFANLT 599 Query: 175 IVDSRDTQTHKI--YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 + + + +A S D + +G R S F + Sbjct: 600 VFEFQPGTFTLTRRIFATSARWDDSVNRWVFENG-WQRTFSGDAISSYQPFTLNSF--PE 656 Query: 233 ANSSTIVLKANDQNLSFL----LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 + K D+ + L+ + R + ++++ L ++ ++ Sbjct: 657 IHEQPGYFKKEDRQSQEMSYSELSKYIRDLKQSGFDTTRLRVQLNRKIAYPLMALVMAIL 716 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF----LF 344 ++ A +R + + + ++ +W + I + IL + LF Sbjct: 717 AVPFALSTG---KRGGLAGMGAGIGVAIS-YWVIAAIFENLGNVNSLPSILAAWSPDILF 772 Query: 345 CISSIFLLMIKK 356 + +LL+ Sbjct: 773 AMVGTYLLLRVP 784 >gi|300725026|ref|YP_003714352.1| putative transmembrane protein, transport [Xenorhabdus nematophila ATCC 19061] gi|297631569|emb|CBJ92278.1| putative transmembrane protein, transport [Xenorhabdus nematophila ATCC 19061] Length = 366 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 62/358 (17%), Positives = 139/358 (38%), Gaps = 27/358 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + N+++ + G +P + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFSQKLVEVLGAAVEGNIPANLVISLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + + +E+ ++ G + L+K L LA+L SI + Sbjct: 62 LILPLSLFLGVLMTFSKLYTESEITVMHACGLGKSVLVKSALILALLTSILAAANVIWFI 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNTLQGIFIVDSR-- 179 P+ Q+ A A+ + + + E F D + + I NT + +F+ R Sbjct: 122 PESSKYQAQVLADAKTNPSLAAIMEGQFKPSRDGNMVLYIGNV-KGNTFENVFLAQLRST 180 Query: 180 DTQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + Q + +A G ++ Q +L+ G + + + +D I +F +Y + Sbjct: 181 NDQRPSVIFADGGHMEERPNGNQVAVLHQGTRYEGTALLRDFRITEFTNYQAVIGHQRAD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 K ++L L + ++ R+EFH RLT L +I L+ + Sbjct: 241 IDNNKVEQKSLEQLWHATDDDS----------RAEFHWRLTLILSVLIMALMVVP--LSA 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFLFCISSIFL 351 RQ + + + L ++ F + + N P+ +++L S + L Sbjct: 289 VNPRQGRILSMLPAML-----LYLIFFMLQSSLRSNGSKGKLDPMFWMWLVNGSYLAL 341 >gi|332704119|ref|ZP_08424207.1| permease YjgP/YjgQ family protein [Desulfovibrio africanus str. Walvis Bay] gi|332554268|gb|EGJ51312.1| permease YjgP/YjgQ family protein [Desulfovibrio africanus str. Walvis Bay] Length = 396 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 64/359 (17%), Positives = 138/359 (38%), Gaps = 20/359 (5%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 ++ + + +F++ ++ + + ++LQ L + + + ++ YL P L ++ P Sbjct: 14 HVFKELLLTFIICLGSLLTLILIGRMLQLKELFLGQSLGVMEIGRLFFYLSPFFLQLLMP 73 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + ++ + EL+ + G S L+ + L + Sbjct: 74 ISCMLAIFLTFLRISSDRELIALKAGGVSLYKLLPSPVLFCCLCCVANLAVAFWGISWGM 133 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSRDTQTHK 185 + + T ++ F L I +Y+P N ++ IF+ DSR +T Sbjct: 134 DNFRAEVLEFARNRTQIMIQPGTFNSDFPGLTIFAEQYDPGNKEMRLIFVQDSRGDETSA 193 Query: 186 IYYAQSGSIDLDRQ----AIILNDGEVHRKSPISKDISIMKFKSYTLQTE----SANSST 237 A+ G + D++ +LNDG ++R + + +KF SY + + Sbjct: 194 TIVAEKGRVVTDKERGRLQFLLNDGAIYRTAKDQ--VHTLKFVSYLVNLDIWKTFNAEQL 251 Query: 238 IVLKANDQNLSFL--LNPNPNNPNYRPE-LLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + + ++ L L +P+ R E + E KR T + ++ GL ++ A Sbjct: 252 SETRPREMSIMNLRRLAADPDLAKKRDEDYVRKVNVEIQKRYTLPVACLVLGLFALPFAC 311 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ---NPYYIPILYLFLFCISSIF 350 V+Q + ++L + + +S I E P+ L +F +S+IF Sbjct: 312 SFQGVKQ---YVGVLMALGMFIVYYSLYSISISLGESGFLAPWIGLWLPNVIFFVSAIF 367 >gi|225871810|ref|YP_002753264.1| permease, YjgP/YjgQ family [Acidobacterium capsulatum ATCC 51196] gi|225794430|gb|ACO34520.1| permease, YjgP/YjgQ family [Acidobacterium capsulatum ATCC 51196] Length = 772 Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 56/362 (15%), Positives = 123/362 (33%), Gaps = 14/362 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ YILR I L+ F+ ++ + + L ++ S+ + + ++P + Sbjct: 1 MRILTRYILREILSHGLIGGALFTFVLFMPNLGDLLELAVRNSSSMGAVGEAFLLMLPNI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +V P + L+ + ++E+ + +G + V +A ++ Sbjct: 61 FVVVIPMSVLVGILLGLSRLAADSEVTAMRASGIGVWRFVGIVSVIACAAWGLGLVNSLY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN---TLQGIFIVD 177 + P L A ++ +F+ + + + +FI + Sbjct: 121 LAPWSSRQTIHLEQSLANAQASYEVQPRVFYEDFKNYVLYVEDVKAGRGAARWGKVFIAN 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAII---LNDGEVHRKSP-ISKDISIMKFKSYTLQTESA 233 + I A+S ++ I L+DG H+ SP D ++ F + + Sbjct: 181 LTNPDAPSITTAESATVINGPNQTILMRLHDGAQHQLSPTEPGDYNLSTFTETDVPLRTG 240 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + + D+ + + N + + E KRL ++ L+ + Sbjct: 241 SQEDVRFHRTDKRILAMTNREL-IERSHGKGGTWFFIELQKRLAYPTACLVLMLVGV--- 296 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN---PYYIPILYLFLFCISSIF 350 R+ K I++++ F ++ S Q P + LF IF Sbjct: 297 PLGMSSRRGGKSGGFVITIALVFIYYFLSSTGTALARQGKIPPLIGVWMANVLFAGCGIF 356 Query: 351 LL 352 LL Sbjct: 357 LL 358 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 56/366 (15%), Positives = 136/366 (37%), Gaps = 18/366 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y++R R F+M + V + + + + + SL ++ + L P+++ Sbjct: 408 LLDEYVIREFLRVFVMVLVSFVMLMLFFTFFELVGDIIRNHSSLLVVGEYLIDLTPSMIY 467 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++TP + V MNR++E+ + TG S ++ P++ +A L+++ LF Sbjct: 468 LITPLAVLIAVLVVFGLMNRSSEITAMKATGISLYRIVLPIMVIASLMAVGLFFFNEYYV 527 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEEN---LFFRLD---DDLYIKISKYNPN-NTLQG--I 173 P+ + L + + + +F + + + ++P+ NT + Sbjct: 528 PQANRKQQALRNEIKGLPAQTTSHPGEQWMFGKREPGHPGMIFYYQYFDPDTNTFLNLTV 587 Query: 174 FIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTES 232 F D + K +AQ S D IL DG + + + E+ Sbjct: 588 FEFDPQSFTLMKRTFAQMASWDQKDHRWILQDGWTRTFENHEIQSYQPFAVTTLPEMIET 647 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + + + + L + + R + ++L L ++ ++++ Sbjct: 648 PHYFEKDFRQSTEMSFAQLRHYIADLSQSGFDTVRLRVQLDRKLADPLITLVMAVLAVPF 707 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF----LFCISS 348 A +R + + +++ ++ +W S + L + LF ++ Sbjct: 708 ALSMG---KRGSLAGVSVAIGVAIA-YWLISGTFEAMGDVSMLPAFLAAWSPDILFALAG 763 Query: 349 IFLLMI 354 +LL+ Sbjct: 764 TYLLLR 769 >gi|311694207|gb|ADP97080.1| permease YjgP/YjgQ family protein [marine bacterium HP15] Length = 369 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 60/357 (16%), Positives = 135/357 (37%), Gaps = 25/357 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y++R I S + ++ + + L+ ++ + + S +LL+I + P Sbjct: 1 MSIIFRYLIRQIMISMVAVSGILLLVFMSGRFLKYLDSAAQGSISAGVLLEIMAFRFPGF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + M +E+ ++ G S L+ L ++ + I + Sbjct: 61 LELILPLGLFIGILLAYGRMYLESEMTVLSACGVSDKALLGKTLLGSLPVMIIVGAMSLY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFR-LDDDLYIKISKYNPNNT-LQGIFIVD- 177 + P + ++++ + + A F L F + + LQG+FI + Sbjct: 121 VSPWGMNQVQEILNEQRKATEFEMLAPGRFQDFSSGGRVTYTEALSEDKRQLQGVFIAEY 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 + D + I A SGS +D + +IL +G + + +++ F++Y L+ E Sbjct: 181 APDGRGLTIITADSGSQLIDPETGSRFLILENGGRFEGAAGQLNYNVIDFEAYGLKIEGG 240 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + T + + L+ + R+ H R + L I L+++ Sbjct: 241 EAGTK-QREEGASTWSLMQSDRLED----------RALLHWRFSLPLIVPIVTLLAV--R 287 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH---KIEQNPYYIPILYLFLFCIS 347 R RQ + H + L + + G + + P ++ +L++ + Sbjct: 288 LSRVNPRQGRFFHLLPAMLV--YITYLGLLIVARDWLAAGKVPEWLGMLWVHALFLG 342 >gi|126667525|ref|ZP_01738495.1| predicted Permease [Marinobacter sp. ELB17] gi|126627951|gb|EAZ98578.1| predicted Permease [Marinobacter sp. ELB17] Length = 382 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 61/376 (16%), Positives = 142/376 (37%), Gaps = 31/376 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + Y++R I S + ++ + + L+ + + S +L + Y P Sbjct: 13 LTIIFRYLIRQIMISMIAVSTILLMVFMSGRFLKYLGNAAEGEISAGVLFSVMAYRFPGF 72 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + M +E+ ++ G S +++ L ++ + + + Sbjct: 73 LELILPLGLFIGILLAYGRMYLESEMTVLLACGVSEGDILRQTLIGSLPVMLVVAAMSLY 132 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD--LYIKISKYNPNNTLQGIFIVD- 177 + P ++++ + + A F L F + + LQG+FI + Sbjct: 133 VSPWGMKQVEEIFNEQRKATEFELLAPGRFQDFTSGGRVTYTEGLSDDKRELQGVFIAEF 192 Query: 178 SRDTQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 ++ + I A++G+ +D Q +IL +G + + D + +F++Y L+ S Sbjct: 193 GKNGEGLTIITAETGTQLVDAQTGSRFLILKNGGRYAGNAGQLDYNTTEFEAYGLKIVSG 252 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 S T L+ + L+ N+P R+ H R + + L+++ Sbjct: 253 KSGTKELEEG-LSTGQLM--KSNDPQQ--------RALLHWRFSLPFIVPVVTLLAV--R 299 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN---PYYIPILYLF-LFCISSI 349 R RQ + H + L + + G + + P +I + ++ LF + Sbjct: 300 LSRVNPRQGRFFHLLPAMLV--YITYLGLLIVARDALADGKVPEWIGMFWVHGLFLALGL 357 Query: 350 FL-----LMIKKKYTK 360 +L + K++ + Sbjct: 358 WLQFGPAWLRKRRLQR 373 >gi|116624897|ref|YP_827053.1| permease YjgP/YjgQ family protein [Candidatus Solibacter usitatus Ellin6076] gi|116228059|gb|ABJ86768.1| permease YjgP/YjgQ family protein [Candidatus Solibacter usitatus Ellin6076] Length = 777 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 71/377 (18%), Positives = 138/377 (36%), Gaps = 32/377 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTES-LNILLKISGYLIPT 59 M+ YI R I S ++ L FI ++ + L+ S+ + N++L++ IP Sbjct: 1 MRLLGRYIFREILTSAVLGTLLASFILFLRSVDPIFELLVKSSSANTNLVLQLFALAIPN 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 VLP PF + L + + E++ + G S +I PVL A L + Sbjct: 61 VLPFTIPFGVLVGILIGLGRLASDGEIIAMRAAGVSSRKVIFPVLLFAALGGGVAAFATL 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN--TLQGIFIVD 177 + P + + + + + +F + + + + P N + +F+ D Sbjct: 121 RLTPYSIHKYTDIVNQLEATQLTADVPSRVFVENFPNTILYVGEVKPGNPSVWKNVFVAD 180 Query: 178 SRDTQT-----------HKIYYAQSG----SIDLDRQAIILNDGEVHRKSPISKDISIMK 222 + I A+ + +R + L + H S + Sbjct: 181 VAPPEKRSAGMRDKAMGPMITVAEQAIAVPDVTNNRLQLTLRNYSTHEMSKDLSSRDTIA 240 Query: 223 FKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFP 282 ++ S L++ LL P +P+ +E Y+ E HKR + Sbjct: 241 PTGQQ-ALTASPPSQTPLRSIGMGTRQLL----AYPRGKPDWVE-YQIELHKRFALPVAC 294 Query: 283 VIFGLISI-VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LY 340 ++ ++ I + R R ++ IF++ F + GF +I Q +P+ L+ Sbjct: 295 IMLAMVGIPLGIATRKGGRSAGYVNAIFVAF---FCYYMGFVSLIGLARQKTLPVPVALW 351 Query: 341 L---FLFCISSIFLLMI 354 L F + IFL + Sbjct: 352 LPNAVFFVVGVIFLARL 368 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 62/369 (16%), Positives = 129/369 (34%), Gaps = 19/369 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + YIL ++ V + + + IN + + SL I+ K +L P ++ Sbjct: 414 LVDTYILSNFVTYLVLMLASFVSLELIRNFFELINDMLRNNISLKIMFKYLFFLSPQLIY 473 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + M++ E+ G S L P+L ++LLS LF + Sbjct: 474 QMLPVSILVAVLAAFGVMSKQNEITAFKACGVSLFRLAAPILVGSVLLSGGLFAFDFYYV 533 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEE-NLFFRLDDDLYI----KISKYNPNNTLQG--IFI 175 L + + T +YL + D L I +T+ +F Sbjct: 534 ANANRIQDALRDQIKGRATQTYLRPDRTWKMGYDSLRIFNYRYFDNSGEESTMSEASVFE 593 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 ++ + + + +A+ + + + DG + D + +F++ T + + Sbjct: 594 LEPKTFRLQRQIFARQAHWNASLKTWVFEDGWTCEYKGPNCD-AYARFQATTFRELTEPP 652 Query: 236 STI---VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 K N L + + E + F+++ + LF +I LI++ Sbjct: 653 DYFLKEARKDEQMNFLQLDSYIKDLTQSGFEGTSKLQVRFYRKFSLPLFALIMALIAVPF 712 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF----LFCISS 348 LV R + I IS+ I+ + + K+ P + +F ++ Sbjct: 713 ---GFLVGSRGAMTGIGISIGIAVA-YIALGQLFEKVGDVNLLSPATAAWAPDVVFALAG 768 Query: 349 IFLLMIKKK 357 +L + K Sbjct: 769 TYLFLRMKS 777 >gi|206901914|ref|YP_002251684.1| putative permease, YjgP/YjgQ family [Dictyoglomus thermophilum H-6-12] gi|206741017|gb|ACI20075.1| putative permease, YjgP/YjgQ family [Dictyoglomus thermophilum H-6-12] Length = 362 Score = 166 bits (421), Expect = 5e-39, Method: Composition-based stats. Identities = 65/367 (17%), Positives = 134/367 (36%), Gaps = 16/367 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K++ YI I F + + + + + + + + S +LK+ Y IP++ Sbjct: 3 IKTYHKYIFSEILGPFFLGIFGFILVMLIQILYEFSDFIIMRRVSFETVLKLLYYKIPSL 62 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 V P + R+ E+ + ++G TL L ++ LS L+ Sbjct: 63 FVFVIPVSLLFAIIFSFGRLMRDGEIFAMRSSGIYFFTLALAPLLFSVFLSFVLWFFTYS 122 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISK-YNPNNTLQGIFIVDSR 179 + P+ +L K EN+FF ++ Y + K N +Q + + D+ Sbjct: 123 LIPESNYRSNRLIQKYFFLNPAPVKGENIFFHDEEGRYYYVKKIIEDKNIMQNVLVFDTS 182 Query: 180 DTQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + IY A+ +R +++L +G VH + I KF+ + + Sbjct: 183 SSNKYPIIYTAEEA--VWNRDSLVLKNGVVHHLGDDAFVIWEGKFEEFKINLPQDFMYIF 240 Query: 239 VLK--ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + S L +Y E + R+ Q + IF L+ Sbjct: 241 YRDRTPQEMPTSEL-RKRIEVYKKAGVSARSYLVENYLRIAQSVAVPIFALMGFSVILLT 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSI---FL 351 + ++ S+ I+F ++GF+ I + + + P L +L + S+ Sbjct: 300 G---RGGRLWGTAFSIIIAF-FYYGFNIIARSLGEYAVFSPFLSAWLPNITLGSLSLGVF 355 Query: 352 LMIKKKY 358 + +K+ Sbjct: 356 IWKVRKW 362 >gi|328952245|ref|YP_004369579.1| permease YjgP/YjgQ family protein [Desulfobacca acetoxidans DSM 11109] gi|328452569|gb|AEB08398.1| permease YjgP/YjgQ family protein [Desulfobacca acetoxidans DSM 11109] Length = 401 Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats. Identities = 59/367 (16%), Positives = 134/367 (36%), Gaps = 20/367 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ R F + L I I ++ +I + + ++ + SL + K L+P +L Sbjct: 16 IIYRHLWRECWDIFAVGLLAITVIVFMGRITRVMQMIITKGVSLIDIGKFCVLLLPYLLL 75 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + ++ + E++ + +G S + L+ P+L A+++S Sbjct: 76 FTVPMAAMIAVLITFLRLSNDNEIMALKTSGVSVLQLLPPILAFALVISSTALFFSLYAT 135 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKY-NPNNTLQGIFIVDSRDT 181 P +++L ++ + E +F + + + +++ ++G+F+ D RD Sbjct: 136 PWGNQEMRRLLSEVTKRRADLGIREQVFNNDFEHVVLFVNRVPTSGGPMEGVFLSDDRDP 195 Query: 182 QTHKIYYAQSGSIDLD----RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 Q A + D R + L G V R S + ++F++Y + E Sbjct: 196 QVPITIAADKALLLFDLKSERLIMQLFQGRVLRLSEDATSFHSIEFETYQVPLELFKFVP 255 Query: 238 IVLKANDQNLSFLL----NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 ++ L L P +Y E ++R + PV ++ ++A Sbjct: 256 KPKSEDEMFLGELRQALAQHKPGTLDY-----NKLLVELNRRFS---LPVGACIMILIAM 307 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN---PYYIPILYLFLFCISSIF 350 + + + + + L I + + + P P L F+F + Sbjct: 308 PLGISTQIKGRAVGLIMGLVIFLLYYLLLTAAWRLGQHAIIPPGLAPWLPDFIFLFLAWG 367 Query: 351 LLMIKKK 357 L ++ Sbjct: 368 LWRRSRR 374 >gi|332535155|ref|ZP_08410964.1| putative permease [Pseudoalteromonas haloplanktis ANT/505] gi|332035425|gb|EGI71924.1| putative permease [Pseudoalteromonas haloplanktis ANT/505] Length = 370 Score = 165 bits (419), Expect = 7e-39, Method: Composition-based stats. Identities = 60/365 (16%), Positives = 137/365 (37%), Gaps = 23/365 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + +S + L ++ I +++ + S + ++L + +P + Sbjct: 2 LIFRYLTAEVLKSQVAVFLTLMTIFLSQKLVGILGDASEGSIPAKLVLSMIALKLPQLAS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + + ++E+ ++ G S +++ L ++ L+I I Sbjct: 62 LILPLSIFLGIILAYSRIYADSEMTVLKACGVSEWYVVRVTLISSVGLAILAAALTMYIA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIKISKYNPNN-TLQGIFIV---D 177 P QL +A+ S L F + + I L +F+ D Sbjct: 122 PWASEQEYQLKEQAKADAGLSALRAGRFQETGNEKAVVFIHNIEKGGKELNKVFVAQLPD 181 Query: 178 SRDTQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 S ++ YA+ G + Q ++L DG+ + + +++ +F Y++Q Sbjct: 182 SEKGNLARLVYAEQGVVVEAVNGEQQLVLTDGKRYETDGTTPALNLTEFDGYSVQIREQE 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 K + LL N PE + ++ RL L L++++A Sbjct: 242 IEHQRRKLEAVPTNQLLAIN------TPESIAQWQ----WRLAIPL---SIPLLTLLAVP 288 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIE--QNPYYIPILYLFLFCISSIFLL 352 + ++ K + ++S+ G F + +E + P I + ++ L + LL Sbjct: 289 LSVVNPRQGKFAKLVPAISLYLGYFILLNAAKFAVEDGKIPPSIGLWWIHLSALFIGGLL 348 Query: 353 MIKKK 357 +IK + Sbjct: 349 IIKGR 353 >gi|326388616|ref|ZP_08210209.1| permease YjgP/YjgQ [Novosphingobium nitrogenifigens DSM 19370] gi|326206867|gb|EGD57691.1| permease YjgP/YjgQ [Novosphingobium nitrogenifigens DSM 19370] Length = 420 Score = 165 bits (418), Expect = 9e-39, Method: Composition-based stats. Identities = 55/362 (15%), Positives = 135/362 (37%), Gaps = 12/362 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + + YI R + L + + + ++L+ + V++ + I+ K+ L+P Sbjct: 4 LTAIDKYIARLVFVPMLSVFVIAASLLVLDKMLKLFDFVATQGGPVGIVFKMLANLMPEY 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + ++EL ++ G S L++ LA +L+ + + Sbjct: 64 ASLAIPLGLMLGILLAFRKLATSSELDVMRAVGLSYTRLLRVPYILAFVLAALNLLIVSY 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISK-YNPNNTLQGIFIVDSR 179 ++P R ++L + + + ++ F L D +++ + LQGIF Sbjct: 124 VQPLSRYYYEELQFELRSGALGASIKVGEFNSLQDRTALRVESSRDDGRQLQGIFARVVG 183 Query: 180 DTQTHKIYYAQSGSI-----DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + A+ G + D + L DG++ ++SP ++ ++ F S+ L + Sbjct: 184 KDGQILVISAREGQFFANRENPDTVILRLTDGQIVQESPTIRNPRVLTFASHDLPIDLPK 243 Query: 235 SSTIVLK---ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 + + L LL+ + + P++ + H RL + + ++++ Sbjct: 244 IEQFRRRGDQDREYFLPELLHIGWSQ-DSTPQMRYQSLASLHFRLVEVAMMFLLPMLAMA 302 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 A + I + V + +P L+ F +++ + Sbjct: 303 LAVPPKRSSSSLGVFVSIILVVAYHKVNEYGQDVSSLGRIDPTIA--LWGPFFIFAALIM 360 Query: 352 LM 353 M Sbjct: 361 WM 362 >gi|148270164|ref|YP_001244624.1| permease YjgP/YjgQ family protein [Thermotoga petrophila RKU-1] gi|281412494|ref|YP_003346573.1| permease YjgP/YjgQ family protein [Thermotoga naphthophila RKU-10] gi|147735708|gb|ABQ47048.1| permease YjgP/YjgQ family protein [Thermotoga petrophila RKU-1] gi|281373597|gb|ADA67159.1| permease YjgP/YjgQ family protein [Thermotoga naphthophila RKU-10] Length = 1061 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 67/356 (18%), Positives = 126/356 (35%), Gaps = 6/356 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+L+ FL+ + + + Q +L+ + L + Y +P Sbjct: 1 MKVLIKYLLKLSVVPFLIGLGGFIVFVSLEILYQLSDLIVRHRVGIEKLFLMLYYYLPYF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + ++ EL+ I G S+ LI P L L LLSI +F + Sbjct: 61 VAMGVPVGVLLAIFWTFSRLSEERELMAIQVHGISQKNLIVPFLILGALLSIAVFFLSDQ 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSR 179 I P+ +S ++ +K L ++ EN+ ++ DD Y + KY+ +T+ + I R Sbjct: 121 IVPEYQSKAEEAMSKYVLKKPEVFVVENVISKIGDDQYFYVEKYDERTSTMWNVVIF--R 178 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS-TI 238 I A+ + L +G + + F L Sbjct: 179 YGHEETIITAKR--VQKKGNDWYLFNGNYYTVDKDGFLKLDVHFSEMKLDITEDIEKLLR 236 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 V K + L + E H R L P++ L+ + + L Sbjct: 237 VGKTPREMTGRELKEKIEFFKKVGVKPSPWVVELHSRYANSLTPIVIVLVGVPLSLLFQL 296 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + + F+ + + G S + + +P P + +F I L ++ Sbjct: 297 RSKSWGVIFTFVLVVLYQGSGAWLSAMGKENLLDPVLAPWIPNIVFTIVGTLLFIL 352 >gi|170288881|ref|YP_001739119.1| permease YjgP/YjgQ family protein [Thermotoga sp. RQ2] gi|170176384|gb|ACB09436.1| permease YjgP/YjgQ family protein [Thermotoga sp. RQ2] Length = 1061 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 68/356 (19%), Positives = 126/356 (35%), Gaps = 6/356 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+L+ FL+ + + + Q +L+ + L + Y +P Sbjct: 1 MKVLIKYLLKLSVVPFLIGLGGFIVFVSLEILYQLSDLIVRHRVGIEKLFLMLYYYLPYF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + ++ EL+ I G S+ LI P L L LLSI +F + Sbjct: 61 VAMGVPVGVLLAIFWTFSRLSEERELMAIQVHGISQKNLIVPFLILGALLSIAVFFLSDQ 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSR 179 I P+ +S ++ +K L ++ EN+ ++ DD Y + KY+ +T+ + I R Sbjct: 121 IVPEYQSKAEEAMSKYVLKKPEVFVVENVISKIGDDQYFYVEKYDERTSTMWNVVIF--R 178 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS-TI 238 I A+ + L DG + + F L Sbjct: 179 YGHEETIVTAKR--VQKKGNDWYLFDGNYYTVDKDGFLKLDVHFSEMKLDITEDIEKLLR 236 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 V K + L + E H R L P++ L+ + + L Sbjct: 237 VGKTPREMTGRELKEKIEFFKKVGVKPSPWVVELHSRYANSLTPIVIVLVGVPLSLLFQL 296 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + + F+ + + G S + + +P P + +F I L ++ Sbjct: 297 RSKSWGVIFTFVLVVLYQGSGAWLSAMGKENLLDPVLAPWIPNIVFTIVGTLLFIL 352 >gi|309390182|gb|ADO78062.1| permease YjgP/YjgQ family protein [Halanaerobium praevalens DSM 2228] Length = 366 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 58/371 (15%), Positives = 127/371 (34%), Gaps = 20/371 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQIL-QRINLVSSSTESLNILLKISGYLIPT 59 MK+ YI + + F I ++ + + + L+K+ +P Sbjct: 1 MKTLNKYIYKELIAPFFFGVAAFTGIFIGTDLIFELTEFYTKWGVEVFTLIKLFFLKLPE 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ + P + T ++ ++E+ + G S + L+ P L L +L S Sbjct: 61 IIVLTFPMASLLGTIMAYNRLSGDSEITAMRAGGVSILALVMPALILGLLTSGVTIGISE 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD------DLYIKISKYNPN-NTLQG 172 + P +Q+ +AQ + +LF D D + +N + ++ Sbjct: 121 FLVPNANYQAEQIMYQAQHGEQRPETQYDLFLTPMDSRTRRPDYMLYAHSFNGDSGIMKD 180 Query: 173 IFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ--- 229 + + D + + A+S D DG ++ ++ + ++F +Y + Sbjct: 181 VVVQSFEDGKPDSVLEAESAEWLSD--GWHFYDGIIYFLDRENRQPA-LEFSTYRSREEI 237 Query: 230 TESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 + + ++ N+ L N + + R EFH R + L IF L++ Sbjct: 238 HSPTQAGKLGKDIDEMNIREL-NEHIALKEEQGRQAYAERVEFHHRFSIPLASFIFALLA 296 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCI 346 K R IS+ + F + + + P+ L + + Sbjct: 297 APLGIKPQ--RSAGSATGFGISIIVIFIYYVLMTVGDALGSQGTIEPWLGAWLQNIVIFV 354 Query: 347 SSIFLLMIKKK 357 + LL + Sbjct: 355 VGLALLFKSSR 365 >gi|329114705|ref|ZP_08243463.1| Permease YjgP/YjgQ Family Protein [Acetobacter pomorum DM001] gi|326695971|gb|EGE47654.1| Permease YjgP/YjgQ Family Protein [Acetobacter pomorum DM001] Length = 411 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 73/359 (20%), Positives = 142/359 (39%), Gaps = 18/359 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + Y++ + FL++ ++ + ++L NL+++ + I + + L+P L Sbjct: 33 GTLDRYLIAQVMPPFLVALSVVMIALILERLLVLFNLLAAGNNHIGIFIGLLAALLPHYL 92 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + V+ M++N E+ I+++G S + + +P + L ++L I F+ I Sbjct: 93 GLAIPAALCVAVFTVIRRMSQNEEIDAINSSGLSLLRITRPYIQLGVILGILSFLLYGFI 152 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSRD 180 +P R + A L+ +F L I K + + + L+ +FI D + Sbjct: 153 QPHARYDFRSTFYIASHTGWAPRLQPRMFASPSSQLTIVADKVSQSGSDLENVFIRDLSE 212 Query: 181 TQTHKIYYAQSGSI----DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 Q A++G I D + I L G + S++ F T A S Sbjct: 213 QQERD-ITARNGHIRIGLDGETVEIDLTHGVIV-TDKGDGVPSLVTFDHSTRYLTHA-SH 269 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPEL---LETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + ++ L +P R + RSE H R+ + L L++ A Sbjct: 270 VSPFRTRGEDERELTSPELVGRLIRHDPSISRPHMRSEVHFRMARSLTVPFIPLLAASLA 329 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 R RQR L ++F + GF +II L ++ S +F++ Sbjct: 330 LMRK--RQRNN-----AGLPLAFIIMVGFDHIIQFGHSMVATKKASLLLIWGPSLVFIV 381 >gi|310822424|ref|YP_003954782.1| hypothetical protein STAUR_5183 [Stigmatella aurantiaca DW4/3-1] gi|309395496|gb|ADO72955.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 371 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 58/367 (15%), Positives = 136/367 (37%), Gaps = 11/367 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+L+ + + F+ + +V+Q L ++ S +L + ++ YL P Sbjct: 1 MILLARYLLKELLAPLGVWVAFMFLLLFVMQFLLGTEVLLGSAVTLTDIGRLILYLTPHF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P F M L ++ + EL + G S + L+ + + +LL+ + + Sbjct: 61 LVKALPIAFLMAILLGLGRLSEDRELTALQALGISPVQLLLGPMAIGLLLAGLMALLAFT 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 +P +++K+L + ++ +F+ DL + + + + + D R Sbjct: 121 AQPWGLTSVKELVNEVIKKNVAGDVKSGVFYEDLSDLTLYAERVSREGGEWTHVLLHDDR 180 Query: 180 DTQTHKIYYAQSGSID----LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE---- 231 + + + AQ G + + ++L +GEVHR + + D S+++F+ + Sbjct: 181 EPSSPLLVLAQRGRVSMREGDEALRLVLEEGEVHRATRSTADYSLLRFEQGEISVGLGGS 240 Query: 232 -SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 + S+ + + + L+ + H RL + P+ F L+ Sbjct: 241 MNRKSNRFRSQKEEMSPGELIQAAEEAEKS-GGNPRPFLMAIHMRLGNAVAPLSFALLGT 299 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 A R + + + + F + ++ + L LF + + Sbjct: 300 PLAIGRKQAGRAWGYLLTLSGYVLFYVLSRVFETLGNQEKLPMVLAAQLPNILFSVLGVV 359 Query: 351 LLMIKKK 357 + + Sbjct: 360 AMWRVSR 366 >gi|117925962|ref|YP_866579.1| permease YjgP/YjgQ family protein [Magnetococcus sp. MC-1] gi|117609718|gb|ABK45173.1| permease YjgP/YjgQ family protein [Magnetococcus sp. MC-1] Length = 392 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 59/346 (17%), Positives = 138/346 (39%), Gaps = 15/346 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+L + + + + + + QIL ++L + + S+++L K+ ++P Sbjct: 1 MKRLSRYLLTECALTSFTALVVLTTLVLLPQILMLVDLWVNKSVSVSVLGKMVLLIMPKF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + L + +++EL++I +G S + + P+ ++++ Sbjct: 61 LVASLPMALLVGILIGLGRLAQDSELIVIKASGISLLRIFYPLSVPIVVVTACSLYLNWF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSR 179 + P + + + TFS ++ F L I +++ + L+G+ I D R Sbjct: 121 LVPDSHTLFQNIRVALLSQNTFS-IKTQTFNNTIPGLTIYVNRQSHGGKLLEGLLIHDER 179 Query: 180 DTQTHKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT---ESA 233 D A+SG + A++L +G H+ +P + + F +Y L+ Sbjct: 180 DPDMPVTVIAKSGMLHRGSTGETALLLKEGSRHQMAPGNA-YRRLNFSTYDLELGIAFET 238 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 SS+ +++ L P L E+H+R L ++ G ++I A Sbjct: 239 ESSSGDRAIRSYSIADL---EQARIAQDPLLASEAEREWHRRFAIPLATLLLGFLAIPLA 295 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL 339 + ++ + +++S+ + + + + + P + Sbjct: 296 MQ--QNQRSGRGFGFIVAISV-LILQFILLTLGEAMAKRGLISPAM 338 >gi|291514071|emb|CBK63281.1| Predicted permeases [Alistipes shahii WAL 8301] Length = 500 Score = 163 bits (414), Expect = 3e-38, Method: Composition-based stats. Identities = 46/239 (19%), Positives = 102/239 (42%), Gaps = 6/239 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ +L+ +++ ++F+ + + + I+ + S I++++ Y + + Sbjct: 1 MKTIHRLVLKSYLGPMVLTFFIVMFVLMMNIVWRYIDELVGKGLSAGIIIELMTYFMANM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +PM P + + ++ N ELL + + G S + + KP++ L L+S+ F N Sbjct: 61 IPMGLPLSMLLAAIMTMGNLGENYELLAMKSAGMSLVQITKPLIILVSLVSVGSFFIGNN 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 + P + + ++ LFF D++ I++S P+ + L + I D+R Sbjct: 121 LVPNANKKLFSTLYDIRQQKQALEFQDGLFFNGIDNMSIRVSHQEPDTHLLHDVLIYDNR 180 Query: 180 DTQTH-KIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 + A SG I L + L GE + ++ S+ + + +T + Sbjct: 181 AANGNMNTIVADSGYIRLSDDKKYLLVTLFHGETYEQTRNSQWFTKSALRHHTFDLQKQ 239 >gi|313157781|gb|EFR57192.1| permease, YjgP/YjgQ family [Alistipes sp. HGB5] Length = 500 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 46/239 (19%), Positives = 104/239 (43%), Gaps = 6/239 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ +L+ +++ ++F+ + + + I+ + S I++++ Y + + Sbjct: 1 MKTIHKLVLKAYLGPMVLTFFIVMFVLMMNIVWRYIDELVGKGLSAGIIIELMTYFMANM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+ P + + ++ N ELL + + G S I + KP++ L L+S+ F N Sbjct: 61 IPLGLPLAMLLAAIMTMGNLGENYELLAMKSAGMSLIRITKPLIILVSLISVGSFFIGNN 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 + P + + + ++ LFF D++ I++S+ P + L + I D+R Sbjct: 121 LVPYANKKVFSILYDIRQQKQSLEFQDGLFFNGIDNMSIRVSRQEPETHLLHDVLIYDNR 180 Query: 180 DTQTH-KIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 A SG I L + L +GE + ++ S+ + K + + + + Sbjct: 181 AANGDMNTIVADSGYIRLSDDKKYLLVTLFNGETYEQTRSSQWFTQSKLRHHIFEKQDQ 239 >gi|110598486|ref|ZP_01386757.1| permease YjgP/YjgQ [Chlorobium ferrooxidans DSM 13031] gi|110339936|gb|EAT58440.1| permease YjgP/YjgQ [Chlorobium ferrooxidans DSM 13031] Length = 435 Score = 163 bits (413), Expect = 4e-38, Method: Composition-based stats. Identities = 62/284 (21%), Positives = 115/284 (40%), Gaps = 14/284 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL+ FL + + I+F+ + + + + ++++ + Sbjct: 1 MKIIDRYILKSHVGPFLFAFITILFVLILQFFASFADRFIGRGIAFSAIVELIILQSAWM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + S+ N+E+ ++ +G S L+ PVL +A+LLS+ + NI Sbjct: 61 VGLAAPMAVLIAVVMAFGSLTTNSEMTVLRASGISLYRLMFPVLCVALLLSLCVERFNNI 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISK-YNPNNTLQGIFIVDSR 179 + P K L A L+EN F L D I + + + + ++G+ I D Sbjct: 121 VLPLANYHAKSLMVDIARAKPAFGLKENAFSTLVDGYSILVREADDQSKEIRGVVIYDRS 180 Query: 180 DTQTHKIYYAQSGSID--LDRQAIILN--DGEVHR-KSPISKDISIMKFKSYTLQTESAN 234 + A+ G+I+ D Q +++ DGE+H+ K P + + FK Y ES+ Sbjct: 181 RPNFTTMETAERGTIEFSGDFQYLVMTLLDGEIHQVKQPAHQVYRNLSFKKYRFVFESSG 240 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQ 278 AN + L + EF KR+ Sbjct: 241 FGFARTSANRLRTG--------DSELSARELLSIGDEFQKRIAA 276 Score = 42.6 bits (99), Expect = 0.10, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 47/112 (41%), Gaps = 7/112 (6%) Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 D+ L+ L + + + + Y + +HK+ + L +F L+ A L R+ Sbjct: 316 DRQLAAL-DAERQSISANRSMYNRYMAAYHKKYSLSLACFVFVLVG---APLGVLARRGG 371 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI--LYLFLFCISSIFLLM 353 +SL + F ++W I + P+ ++L IS+I +L+ Sbjct: 372 FGVGAGMSL-LFFVLYWMLMISGETIAERGLLDPMLSMWLGNIVISAIGILL 422 >gi|239993538|ref|ZP_04714062.1| permease YjgP/YjgQ [Alteromonas macleodii ATCC 27126] Length = 366 Score = 163 bits (413), Expect = 4e-38, Method: Composition-based stats. Identities = 57/366 (15%), Positives = 135/366 (36%), Gaps = 22/366 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+L+ +S L ++ I ++ ++ + S ++L G P + Sbjct: 2 LIFRYLLKETLKSQLAIFFILMAIFVTLRFVRVLGDASDGDIPAGLVLGFLGLYAPILSS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + + ++E+ ++ G S + + +LFL++L+ I Sbjct: 62 LVLPISAYLGIMLAHGRLYVDSEMTVMRACGISEWYVTRVMLFLSVLIMIVTGAITLYFA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIKISKYNPNNTLQGIFIVDSRDT 181 P QL KA+ S L F + + I + + N+ LQ +F+ ++ Sbjct: 122 PLAAENEYQLREKARNEAGISALMPGRFQQTGNEKAVIFVHDVDNNDKLQRVFLSQNQTD 181 Query: 182 QTH---KIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + ++ YAQ+G + + ++L +G + K ++F Y +Q + Sbjct: 182 DSEGDVRVVYAQTGEVANNPDGTRNLVLKEGVQYEGKQSEKAFRKVEFDEYQIQIADKPA 241 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 K + + L + R+E R+ L + ++A Sbjct: 242 DETRRKVSVLPTNELWEDDS----------IEARAELQWRIAIPL---SIPFLVLIAVPL 288 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN--PYYIPILYLFLFCISSIFLLM 353 A+ ++ + +F ++ + G F +E P + + ++ + +L+ Sbjct: 289 SAVDPRQGRFGKMFPAILLYLGYFLLLLASRRVLEDGKMPPQLGLWWVHTIMLIIGVMLI 348 Query: 354 IKKKYT 359 ++ + T Sbjct: 349 VRDRKT 354 >gi|157363796|ref|YP_001470563.1| permease YjgP/YjgQ family protein [Thermotoga lettingae TMO] gi|157314400|gb|ABV33499.1| permease YjgP/YjgQ family protein [Thermotoga lettingae TMO] Length = 1102 Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats. Identities = 67/356 (18%), Positives = 133/356 (37%), Gaps = 5/356 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI++ L+ V V + Q +L+ + +LLK+ Y +P Sbjct: 1 MGILTKYIIKLSVGPMLIGLAGFVIFVSVEILYQLSDLIVRHRVGIFVLLKVLYYYLPYF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + VL+ ++ + EL+ + G S LI P L L+I LS ++ + Sbjct: 61 VALGIPVGILLSIFWVLSQLSTDHELMALQVHGISLKVLIVPFLILSIALSFVTYVLSDR 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 I P + +K ++ EN+ ++D+ Y + KY+ N L+ + + Sbjct: 121 IVPLYNQKADSVISKYVYKRPEVFISENVLTKIDESQYFYVKKYDRQNGILEDVVLF-RN 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS-TI 238 + +I A+ + ++ + DG+++R + F L + S Sbjct: 180 EPSEEEIITAKK--VVKEKNKWFMYDGKMYRVDKDGVLRFDISFNKVELDLQEDIESIMR 237 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 V K S L + + E H R + L PVI LI I + L Sbjct: 238 VGKTPKDMRSEELKERIDTFKKLGVDPAPWIVELHTRYSLSLGPVIIVLIGIPLSLMFNL 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + + F+ + + G + + +P + +F ++ L ++ Sbjct: 298 KSKSWGVILTFVIVVLYQGSGAWLGAMGKERLVDPVTSAWIPNTIFGVTGALLFLL 353 >gi|322435367|ref|YP_004217579.1| permease YjgP/YjgQ family protein [Acidobacterium sp. MP5ACTX9] gi|321163094|gb|ADW68799.1| permease YjgP/YjgQ family protein [Acidobacterium sp. MP5ACTX9] Length = 813 Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 51/347 (14%), Positives = 129/347 (37%), Gaps = 19/347 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ YILR + L+ + F+ + ++ + + +V ++ SL+ + ++ Y +P Sbjct: 1 MRLLTRYILREVLSHALLGGVLFTFVLFTSRLGKILEIVVRNSASLSDVARLIAYFLPEA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L+ + ++E+ + +G + ++ V ++I + Sbjct: 61 LIVTIPMAVLVGILLGLSRLAADSEITAMRASGMGALDFVRIVSLVSIGALALGLFNSLY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN---TLQGIFIVD 177 + P+ + + L + + +E +F ++ + + P + + +F+ D Sbjct: 121 LAPRSAANLLALENSLKYSQASFEVEPRVFDEDFKNIVLYVQDVRPGSGAALWRHVFVAD 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKD-ISIMKFKSYTLQTESA 233 + KI A + + L DG H+ SP + +I F+ + ++ Sbjct: 181 LTEPSAPKITTADQALVTSAGPGNLNLHLTDGAQHQISPTDANQYNISTFQVTDIPMQTG 240 Query: 234 NSSTIVLKANDQNLSFLLNPN---------PNNPNYRPELLETYRSEFHKRLTQWLFPVI 284 L +D + L P P + Y+ E +KR + ++ Sbjct: 241 AQEDAHLSRSDTPILALSLPELIQRGNQAAAPGPKHDVRAARLYKIELNKRFSYPFACLV 300 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ 331 L+ + ++ K +++ + F ++ S + Q Sbjct: 301 LMLVGV---PLGLSSKRGGKSTGFVLTILLVFVYYFLSSVGVALANQ 344 Score = 112 bits (281), Expect = 8e-23, Method: Composition-based stats. Identities = 54/396 (13%), Positives = 128/396 (32%), Gaps = 52/396 (13%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + YI+R G +F + + + + I + + + + LIP +L Sbjct: 424 ILDDYIMREFGATFALVLAAFSMVFLIFTFFELIGDIIRNRIAFVTVGDYLLNLIPYILY 483 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 VTP C + S+ + +E + +G S ++ PVL L +++ LF + Sbjct: 484 NVTPLCVLVAVLVTFGSLAKTSEFTAMKASGVSLYRVVTPVLVLTAVIACSLFAFDEFYL 543 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENL-------------------FFRLDDDLY----- 158 P+ + L + + ++L + + + + Sbjct: 544 PQANRRQEALRSVIKGKPAQTFLRPDRQWISGQTVLDPISLAQSRSWAPIAPAVVHIGDT 603 Query: 159 -------IKISKYNPNNTL---QGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEV 208 ++P++ +F D + +A+S D + I +G Sbjct: 604 AKQPARIFYYQFFDPDHDAFANLTVFEFDPATFTLTRRIFAESAKWDSNVNQWIFENGWS 663 Query: 209 HRKSPISKDISIMKFKSYTL-QTESANSSTIVLKANDQNLSFL----LNPNPNNPNYRPE 263 S D +K +TL + K D+ + L+ ++ Sbjct: 664 RTFSGEVAD----TYKPFTLANFPEIHEQPQYFKKEDRQSQQMSFGELSSYISDLRQSGF 719 Query: 264 LLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFG-VFWGF 322 + +++L ++ +++I A K+ +++I V+ G Sbjct: 720 NTMRLSVQLNRKLAYPAITLVMAILAIPFALS-----SGKRGGVTGFAIAILLAVVYLGV 774 Query: 323 SYIIHKIEQNPYYIPILYLF---LFCISSIFLLMIK 355 S + + P+L + L + +++ Sbjct: 775 SSLFEAMGNVNTLPPMLAAWTPDLLFTFAGAYFLLR 810 >gi|189347121|ref|YP_001943650.1| permease YjgP/YjgQ family protein [Chlorobium limicola DSM 245] gi|189341268|gb|ACD90671.1| permease YjgP/YjgQ family protein [Chlorobium limicola DSM 245] Length = 403 Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 66/399 (16%), Positives = 143/399 (35%), Gaps = 44/399 (11%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL+ F+++ + IVF+ + + + ++ + ++ + Sbjct: 1 MKIIDRYILKSHIGPFILAFITIVFVLVLQFLAGFSDRFLGKGINIADIAELVMLQSAWM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + +M ++E+ + +G S L PVL +A LLS+ + N+ Sbjct: 61 VVFAVPMAVLVAVIMAYGTMTNSSEMTVFRASGLSLYRLAVPVLIVAALLSLLVERFNNV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 + P+ K L A L EN F D I + K + + ++G+ + D R Sbjct: 121 VIPEANYRSKSLMMDIARAKPTFGLTENAFSSFIDGYSIFVRKTDEASKEIRGVVLYDLR 180 Query: 180 DTQTHKIYYAQSGSID--LDRQAIILN--DGEVHRKSPIS--------KDISIMKFKSYT 227 + ++ + A+ G I D + +++ +GE+H+ + F++ Sbjct: 181 NPKSRTMMSAERGVIRFSPDNRFLVMTLFNGEIHQIDQSDYHKYRAMRFGQHRLVFETTG 240 Query: 228 LQTESANSSTIVLKANDQNLSFL--------------------------LNPNPNNPNYR 261 ++ I ++ + L L Sbjct: 241 FGFSRTSNDRIRGNISELSAGELHVAASALQRGIVSAERRVASITDAGPLQREQERIEAD 300 Query: 262 PELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWG 321 Y E++K+ + +F L L R+ ISL++ F ++W Sbjct: 301 KMQYNKYLIEYYKKYAISVACFVFAL---AGIPLGVLARRGGFGVGAGISLAL-FVLYWS 356 Query: 322 FSYIIHKIEQNPYYIPILYLFLF-CISSIFLLMIKKKYT 359 KI + P+L ++ ++ +F L + + + Sbjct: 357 MIIGGEKIAERGLLDPVLSVWSANAVTGLFGLFLLHRMS 395 >gi|332991780|gb|AEF01835.1| permease YjgP/YjgQ [Alteromonas sp. SN2] Length = 366 Score = 162 bits (411), Expect = 6e-38, Method: Composition-based stats. Identities = 56/366 (15%), Positives = 134/366 (36%), Gaps = 22/366 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+L+ +S L ++ I ++ ++ + S ++L G P + Sbjct: 2 LIFRYLLKETLKSQLAIFFILMAIFVTLRFVRVLGDASDGDIPAGLVLGFLGLYAPILAS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + + ++E+ ++ G S + + +LFL++L+ I Sbjct: 62 LVLPISAYLGIMLAHGRLYVDSEMTVMRACGISEWYITRVMLFLSVLIMIVTGAITLYFA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIKISKYNPNNTLQGIFIVDSRDT 181 P QL KA+ S + F + + I + + ++ L+ +F+ ++ Sbjct: 122 PMAAENEYQLREKARNEAGLSAIIPGRFQQTGNAKAVIFVHDIDTDDQLRRVFLSQNKTE 181 Query: 182 QTHK---IYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + YAQ+G + + ++L G + K ++F Y +Q + Sbjct: 182 NGENQVQVVYAQTGQVASNPDGTRNLVLKQGVQYEGQQSQKSYRKVEFDEYQIQIADKPA 241 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 K + + L E +E R+E R+ L + ++A Sbjct: 242 EEARRKVSVLPTTELWG---------DESIEA-RAELQWRIAIPL---SLPFLILIAVPL 288 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIE--QNPYYIPILYLFLFCISSIFLLM 353 A+ ++ + +F ++ + G F +E + P + + ++ + L+ Sbjct: 289 SAVDPRQGRFGKMFPAILLYLGYFLLLLASRRVLEDGKIPPQLGLWWVHTIMLIIGVALI 348 Query: 354 IKKKYT 359 ++ + T Sbjct: 349 VRDRKT 354 >gi|220932597|ref|YP_002509505.1| permease YjgP/YjgQ family protein [Halothermothrix orenii H 168] gi|219993907|gb|ACL70510.1| permease YjgP/YjgQ family protein [Halothermothrix orenii H 168] Length = 1040 Score = 162 bits (411), Expect = 6e-38, Method: Composition-based stats. Identities = 68/367 (18%), Positives = 150/367 (40%), Gaps = 14/367 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRI-NLVSSSTESLNILLKISGYLIPTV 60 + ++YI++ + FL+ + I+ + + +L+++ +L+ + ++LK+ Y +P + Sbjct: 8 RIIDVYIIKEVLYPFLIG-VSIIGVIMLSGLLRQLSDLIIIKKIPVAVVLKLLLYQLPEI 66 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P T + + +NR E + G S LI P+L L I++S ++ Sbjct: 67 IVQTFPIAILFATMSGMGRLNRENEFTALRMGGISLYRLILPLLILGIVISGMTYLLNEE 126 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSR 179 I P + + + K+ L ++EN+FF+ D + +++ +N ++ I + + Sbjct: 127 IVPWTKHRAQNIIRKSVLKEVPPDIKENVFFKGPDGRLFYVGRFDKEDNIMKKIVVYTFK 186 Query: 180 -DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK--SYTLQTESANSS 236 D I A G + ++ +L G +HR + +F + TE N Sbjct: 187 GDNGYPLIVTANLGEVYKEK--WVLKKGFIHRYNGEGHLTMETRFDVMEIKINTEVHNFF 244 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLE--TYRSEFHKRLTQWLFPVIFGLISIVAAD 294 ++ + L ++ ++ + ++H +L+ L +IF LI + Sbjct: 245 ADQKTPDEMSREEL---KKEIDLFQNSGIDVHSLLVDYHLKLSMPLAALIFILIGTPLSL 301 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R I I + F + S+ +P L +F I I LL+ Sbjct: 302 TSKDSRSFSIIFTIVVVFLYYFVMSLSRSF-GRNGRLDPVLAAWLPNIIFSIIGITLLIW 360 Query: 355 KKKYTKI 361 ++ + + Sbjct: 361 RESWRNL 367 >gi|15644481|ref|NP_229533.1| hypothetical protein TM1735 [Thermotoga maritima MSB8] gi|4982312|gb|AAD36800.1|AE001812_10 conserved hypothetical protein [Thermotoga maritima MSB8] Length = 1074 Score = 162 bits (411), Expect = 6e-38, Method: Composition-based stats. Identities = 68/356 (19%), Positives = 126/356 (35%), Gaps = 6/356 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K Y+L+ FL+ + + + Q +L+ + L + Y +P Sbjct: 14 LKVLIKYLLKLSVVPFLIGLGGFIVFVSLEILYQLSDLIVRHRVGIEKLFLMLYYYLPYF 73 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + ++ EL+ I G S+ LI P L L LLSI +F + Sbjct: 74 VAMGVPVGVLLAIFWTFSRLSEERELMAIQVHGISQKNLIVPFLILGALLSIAVFFLSDQ 133 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSR 179 I P+ +S ++ +K L ++ EN+ ++ DD Y + KY+ +T+ + I R Sbjct: 134 IVPEYQSKAEEAMSKYVLKKPEVFVVENVISKIGDDQYFYVEKYDERTSTMWNVVIF--R 191 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS-TI 238 I A+ + L DG + + F L Sbjct: 192 YGHEETIVTAKR--VQKKGNDWYLFDGNYYTVDKDGFLKLDVHFSEMKLDITEDIEKLLR 249 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 V K + L + E H R L P++ L+ + + L Sbjct: 250 VGKTPKEMTGKELKEKIEFFKKVGVKPSPWVVELHSRYANSLTPIVIVLVGVPLSLLFQL 309 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + + F+ + + G S + + NP P + +F I L ++ Sbjct: 310 RSKSWGVIFTFVLVVLYQGSGAWLSAMGKENLLNPVLAPWIPNIVFTIVGTLLFIL 365 >gi|83644756|ref|YP_433191.1| permease [Hahella chejuensis KCTC 2396] gi|83632799|gb|ABC28766.1| predicted Permease [Hahella chejuensis KCTC 2396] Length = 365 Score = 162 bits (410), Expect = 7e-38, Method: Composition-based stats. Identities = 59/369 (15%), Positives = 138/369 (37%), Gaps = 26/369 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+ R + S L ++ I + ++ + + S ++L I GY +P Sbjct: 1 MFIILRYLSRQLLVSMLAVAGVLLLIFMSGRFIKYLADAAQGKLSADVLFAIMGYRLPGF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + M +E+ ++ G +R LIK + A+L+ + + Sbjct: 61 LELILPLGLFIGILLAYGRMYLESEMTVLFACGMNRFQLIKLTMVSALLVMLVVGAMSLY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD--LYIKISKYNPNNTLQGIFIVDS 178 + P + ++ + F L F L + + +Q +FI + Sbjct: 121 VSPWGLRQVDEIFSDQSKITEFELLAPGRFQSLRSGERVTYTEGLSSDKREMQNVFIAER 180 Query: 179 -RDTQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 ++ + + A+ G+ +D ++L++G ++ P D ++++ +Y ++ Sbjct: 181 DSESGSISVLAAKRGTQLVDPSTGSRFVVLHEGARYQGRPGEMDYRVIEYDAYGIKIAEP 240 Query: 234 NSSTIVLKANDQNLSFLLNPN-PNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 ++ + + S L + P + R+ R++ L I L++I Sbjct: 241 DAEAEKTRDEAKPTSELWRSDNPKD-----------RALLQWRISIPLLVPIVALLAIP- 288 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI---EQNPYYIPILYLFLFCISSI 349 R RQ + H + L + + G K E+ +I + ++ ++ Sbjct: 289 -LSRVNPRQGRFFHLLPAML--IYITYLGLLIASRKSLEKERISEWIGMWWVHGTFLAIA 345 Query: 350 FLLMIKKKY 358 +LM + Sbjct: 346 LVLMFGPDW 354 >gi|332307892|ref|YP_004435743.1| permease YjgP/YjgQ family protein [Glaciecola agarilytica 4H-3-7+YE-5] gi|332175221|gb|AEE24475.1| permease YjgP/YjgQ family protein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 368 Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 55/367 (14%), Positives = 138/367 (37%), Gaps = 24/367 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ +S L ++ I + ++ ++ S+ +++L +P + Sbjct: 2 LIFRYLVKETVKSQTAVFLVLMAIFITNKFVRVLSEASNGDIPASLVLGFLALSMPVLAS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + ++E+ ++ G S + + +L LA+++++ + Sbjct: 62 LILPLSLFLGIMLAHGRLYVDSEMTVMRACGISEWYVTRVMLVLAVIMALITGAMTLWVA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIKISKYNPNNT-LQGIFIVD--- 177 P QL +A + L F + + I + + ++ L+ +F+ Sbjct: 122 PMSVEREYQLEEQAGADTGLTTLIPGRFQQTANEKAVIFVHEIGNDSEPLKRVFMAQHDT 181 Query: 178 SRDTQTHKIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + D+Q + YA+ G + + ++L DG + + KD +++F Y +Q Sbjct: 182 TTDSQNVHLVYAKQGGLRELPDGSETLVLGDGIQYEGTLGEKDYRVVEFGEYQIQIAEQE 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + K + + L N +P+ +E R L + I+A Sbjct: 242 AEQKRRKLSAYTTAQLFN----DPSIDA------IAELQWRFAIPL---SLFFLVIIAVP 288 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI--LYLFLFCISSIFLL 352 A ++ + +F + + + ++ K+ ++ P+ L+ I I L Sbjct: 289 LSAADPRQGRFGKMFPA-LMLYLGYFLLLLAGRKVLEDGKIPPMLGLWWVHAVIGVIGLA 347 Query: 353 MIKKKYT 359 +I K Sbjct: 348 LIFKGRP 354 >gi|94968543|ref|YP_590591.1| YjgP/YjgQ family protein [Candidatus Koribacter versatilis Ellin345] gi|94550593|gb|ABF40517.1| transporter, YjgP/YjgQ family [Candidatus Koribacter versatilis Ellin345] Length = 792 Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 49/381 (12%), Positives = 130/381 (34%), Gaps = 26/381 (6%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YIL + + F+ ++ + + + L+ ++ L + +I +PT L Sbjct: 4 RILTRYILGEVLSHGAIGLALFTFVIFMRDLGRLLELIVRNSAPLPSVAEIFFLTLPTAL 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L+ ++ ++E+ + ++G + ++ V ++ L I ++ + Sbjct: 64 TVTLPMAVLVGILIGLSRLSADSEVTAMRSSGLGSLFFVRIVSIFSVALWILALVNNLYV 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN---TLQGIFIVDS 178 P+ + + L K + + ++ +F+ + + + + +G+F+ D Sbjct: 124 APRSAAALAHLQDKLKSSQASFEVQPRVFYEDFKNYVLYVEDSKSGSGSALWRGVFLADV 183 Query: 179 RDTQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKD-ISIMKFKSYTLQTESAN 234 KI A+ G + + + L +G +P + F + + Sbjct: 184 STPSQPKITMAERGVVVAEGPNSLHLHLENGTQQETNPKDPTQYQVSTFDQTDIPIQLPE 243 Query: 235 SSTIVLKA----NDQNLSFLLNPNPNNPNYRPELLET---------YRSEFHKRLTQWLF 281 ++ + + L + L Y EF +R+ Sbjct: 244 TNDKPAPELVPVAELSTQELWRLAHSGGVSAGHYLGNSIAQVKARWYAVEFQRRIALPTA 303 Query: 282 PVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN---PYYIPI 338 ++ L+ I R+ K +++ + F + + Q P Sbjct: 304 CLVLTLVGI---PLGLSSRRGGKSMGFVLTIILVFAYYVVSLIGVSLGRQGKLPPAVGVW 360 Query: 339 LYLFLFCISSIFLLMIKKKYT 359 + +F ++ I LL + Sbjct: 361 MANVVFLVAGIMLLHRVDRAP 381 Score = 125 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 59/365 (16%), Positives = 138/365 (37%), Gaps = 19/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + ILR F+M V +A V + + + + S+ +L L P+++ Sbjct: 432 LLDDMILRDFLLYFVMVLTTFVMLALVFTFFELLGDIVKNRVSVVMLGDYLLNLSPSLIY 491 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++TP + M R+ E+ + TG S + PV+ +A +++ LF+ + + Sbjct: 492 LMTPLSVLLAVLVTFGLMQRSNEITAMKATGISIYRVAFPVIAIAGVVAASLFVFDQLYI 551 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKY--NPNNTLQG--IFIVDS 178 PK + L + + +YL + + + I + N G IF D Sbjct: 552 PKANKRQETLRNEIKGKPPQTYLRPDRKWIFGSNNTIYYYEVYDADQNRFGGISIFQFDP 611 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + YAQ + Q + G + + + + I +FK + ++T + + Sbjct: 612 KTFALQSRIYAQHAHWEDGLQKWVFEQGWMRKLNGSA----IEEFKPFEVETIALAAEPP 667 Query: 239 VL------KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 ++ + + LL ++ + +R + +K+L + ++ +++I Sbjct: 668 AYFKKEVRQSQEMDYQELLR-YIHDLQQSGFDVVRFRVQLYKKLAYPIITLVMAILAIPF 726 Query: 293 ADKRALVRQRKKIHPIFISLSISFG--VFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 + R R+ + + ++ I+ V G + Q P + L + Sbjct: 727 SVYRQ--RRGGPLAGVATAIGIAILYWVSAGLFEAMGNANQLPALLAAWAPNLIFGFAAG 784 Query: 351 LLMIK 355 ++++ Sbjct: 785 YMVLR 789 >gi|77361338|ref|YP_340913.1| hypothetical protein PSHAa2422 [Pseudoalteromonas haloplanktis TAC125] gi|76876249|emb|CAI87471.1| putative membrane protein [Pseudoalteromonas haloplanktis TAC125] Length = 370 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 56/365 (15%), Positives = 137/365 (37%), Gaps = 23/365 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + +S + L ++ I +++ + S + ++L + +P + Sbjct: 2 LIFRYLTAEVLKSQVAVFLTLMTIFLSQKLVSILGDASEGSIPAKLVLSMIALKLPQLAS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + + ++E+ ++ G S +++ L ++ L+I + Sbjct: 62 LILPLSIFLGIILAYSRIYADSEMTVLKACGVSEWYVVRVTLISSVGLAILAAALTMHVA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIKISKYNPNN-TLQGIFIV---D 177 P QL +A+ S L F + + + I L +F+ D Sbjct: 122 PWASEQEYQLKEQAKADAGLSALRAGRFQQTGNEKAVVFIHNIENGGKELNKVFVAQLPD 181 Query: 178 SRDTQTHKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 S ++ YA+ G + Q ++L+DG+ + ++ +++ +F Y++Q Sbjct: 182 SEKDNLARLVYAEQGVVIEAQNGEQQLVLSDGKRYETDGLTPALNLTEFDGYSVQIREQE 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 K + LL N + + R+ L L++++A Sbjct: 242 IEHQRRKLEAIPTNQLLALNTPEATAQWQ----------WRIAIPL---SIPLLTLLAVP 288 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIE--QNPYYIPILYLFLFCISSIFLL 352 + ++ K + ++S+ G F + +E + P I + ++ L + LL Sbjct: 289 LSVVNPRQGKFAKLVPAISLYLGYFILLNAAKFAVEDGKIPPSIGLWWIHLSALFIGGLL 348 Query: 353 MIKKK 357 +IK + Sbjct: 349 IIKGR 353 >gi|288572984|ref|ZP_06391341.1| permease YjgP/YjgQ family protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288568725|gb|EFC90282.1| permease YjgP/YjgQ family protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 365 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 64/358 (17%), Positives = 138/358 (38%), Gaps = 14/358 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRI-NLVSSSTESLNILLKISGYLIPTV 60 + + +IL+ +G SFL L I +L +I +++ SL+ +LK+ Y +P+V Sbjct: 4 RILDRFILKELGSSFLFGVLTFTVILVAGDLLFKIADMLIEKGVSLSTVLKLFVYKLPSV 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + T ++ N+E++ + +G S + +PVL A L++I F Sbjct: 64 VVLTLPMSCLLSTLLSFGRLSSNSEIVALKASGISFQRIARPVLLGASLVAISAFFMNET 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD----LYIKISK-YNPNNTLQGIFI 175 + P + + + + L E +F + + I + + +++ + + Sbjct: 124 VVPIANRAAENILMYDVVKQKPTLLRERMFLKDESGGKLNRVIYVGRLRTRKGSMENVLV 183 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK--SYTLQTESA 233 + D + +I A G + L+DG+ K + FK L A Sbjct: 184 QEFDDGRLSRITTADEG--NWSDGVWTLSDGKAFSVDKEGKVGFLFGFKEQRLPLNLTPA 241 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + LK ++ +LS L + L +H + ++ LI AA Sbjct: 242 QVARSSLKPDEMSLSQLREH-IEIMKAQGANLIPLWVSYHLHIAIPWASLVLALIG--AA 298 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 R+ +S+ I F + + + ++ + P++ +L + + Sbjct: 299 LGVRPQRRGGMGVGFGLSVLIVFAYYVV-MSMGRALGESGHIPPLVAAWLANVVFLGF 355 >gi|332142603|ref|YP_004428341.1| permease YjgP/YjgQ [Alteromonas macleodii str. 'Deep ecotype'] gi|327552625|gb|AEA99343.1| permease YjgP/YjgQ [Alteromonas macleodii str. 'Deep ecotype'] Length = 366 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 58/366 (15%), Positives = 134/366 (36%), Gaps = 22/366 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+L+ +S L ++ I ++ ++ + S ++L G P + Sbjct: 2 LIFRYLLKETLKSQLAIFFILMAIFVTLRFVRVLGDASDGDIPAGLVLGFLGLYAPILSS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + + ++E+ ++ G S + + +LFL++L+ I Sbjct: 62 LVLPISAYLGIMLAHGRLYVDSEMTVMRACGISEWYVTRVMLFLSVLIMIVTGAITLYFA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIKISKYNPNNTLQGIFIVDSRDT 181 P QL KA+ S L F + + I + + N+ LQ +F+ ++ + Sbjct: 122 PLAAENEYQLREKARNEAGISALMPGRFQQTGNEKAVIFVHDVDKNDKLQRVFLSQNQTS 181 Query: 182 QTH---KIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + ++ YAQ+G + + ++L G + K ++F Y +Q + Sbjct: 182 DSEGDVRVVYAQTGEVASNPDGTRNLVLKQGVQYEGIQSEKAYRKVEFDEYQIQIADKPA 241 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 K + S L + R+E R+ L + ++A Sbjct: 242 DETRRKVSVLPTSELWEDDS----------IEARAELQWRIAIPL---SIPFLILIAVPL 288 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN--PYYIPILYLFLFCISSIFLLM 353 A+ ++ + +F ++ + G F +E P + + ++ + L+ Sbjct: 289 SAVDPRQGRFGKMFPAILLYLGYFLLLLASRRVLEDGKMPPQLGLWWVHTIMLIIGITLI 348 Query: 354 IKKKYT 359 ++ + T Sbjct: 349 VRDRKT 354 >gi|227114629|ref|ZP_03828285.1| putative permease [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 371 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 56/364 (15%), Positives = 139/364 (38%), Gaps = 30/364 (8%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N+++ + G +P ++ Sbjct: 2 IIIRYLVRETFKSQLAILFILLLIFFCQKLVRILGAAVDGEIPTNLVISLLGLGVPEMVQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ G + L+K L LA+ +I I+ + Sbjct: 62 LILPLSLFLGVLMTFGRLYAESEITVMHACGLGKRVLLKAALVLAVFTAIVATINVMWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +++ A+A+ + L E F + + + +F+ R + Sbjct: 122 PWSSRHQEEVLAEAKANPGMAALVEGQFQSAQGGNAVLFVGNVKGSEFEHVFLAQLRPSG 181 Query: 183 T--HKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A G I + Q + L++G + + + +D I F +Y + + Sbjct: 182 NARPSVVVADRGHIKQNEDGAQVVTLDNGSRYEGTALLRDFRITDFTNYQAVIGHQSVTL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +++ L + + ++ R+EFH RLT + +I L+ + Sbjct: 242 NNSDVQQMDMNTLWHSDAHDA----------RAEFHWRLTLIISVLIMALMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFL-----FCISSI 349 RQ + +S+ + ++ F + + N P+++++L F I+ + Sbjct: 290 NPRQGR-----VLSMLPAMLLYLIFFLLQSSLRSNASKGKIDPMVWVWLTNLMYFGIAVM 344 Query: 350 FLLM 353 L Sbjct: 345 LNLW 348 >gi|315125733|ref|YP_004067736.1| hypothetical protein PSM_A0635 [Pseudoalteromonas sp. SM9913] gi|315014247|gb|ADT67585.1| hypothetical protein PSM_A0635 [Pseudoalteromonas sp. SM9913] Length = 371 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 56/367 (15%), Positives = 139/367 (37%), Gaps = 23/367 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+ + +S + L ++ I + + + S + ++ + +P + Sbjct: 1 MLLIFRYLTTEVLKSQVAVFLTLMTIFLSQKFVVILGDASEGSIPAKLVFAMIALKLPQL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + + + ++E+ ++ G S +++ L +++L++ + Sbjct: 61 ASLILPLSLFLGIILAYSRIYADSEMTVLKACGVSEWYVVRITLISSVILALLAAVLTLY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIKISKYNPNN-TLQGIFIV-- 176 + P QL +A+ S L F + + + I L +F+ Sbjct: 121 VAPWASEQEYQLKEQAKADAGLSALRAGRFQQTGNEKAVVFIHNIENGGKELNKVFVAQL 180 Query: 177 -DSRDTQTHKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 DS ++ YA+ G + Q ++L DG+ + + +++ +F Y++Q Sbjct: 181 PDSEKGDLARLVYAEQGVVIEAQSGEQQLVLTDGKRYETDGEAPSLNLTEFDGYSVQIRE 240 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 K L++ N PE + ++ RL L L++++A Sbjct: 241 QEIEHQRRKLEAVPTRELMSIN------TPEAIAQWQ----WRLAIPL---SIPLLTLLA 287 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIE--QNPYYIPILYLFLFCISSIF 350 + ++ K + ++S+ G F + +E + P I + ++ L + Sbjct: 288 VPLSVVNPRQGKFAKLVPAISLYLGYFILLNAAKFAVEDGKIPPSIGLWWIHLSALFIGS 347 Query: 351 LLMIKKK 357 LL+I+ + Sbjct: 348 LLIIRGR 354 >gi|227327171|ref|ZP_03831195.1| putative permease [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 371 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 55/364 (15%), Positives = 138/364 (37%), Gaps = 30/364 (8%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N+++ + G +P ++ Sbjct: 2 IIIRYLVRETFKSQLAILFILLLIFFCQKLVRILGAAVDGEIPTNLVISLLGLGVPEMVQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ G + L+K L LA+ +I I+ + Sbjct: 62 LILPLSLFLGVLMTFGRLYAESEITVMHACGLGKRVLLKAALVLAVFTAIVATINVMWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +++ A+A+ + L E F + + + +F+ R + Sbjct: 122 PWSSRHQEEVLAEAKANPGMATLVEGQFQSAQGGNAVLFVGNVKGSEFEHVFLAQLRPSG 181 Query: 183 T--HKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A G I + Q + L++G + + + +D I F +Y + + Sbjct: 182 NARPSVVVADRGHIKQNEDGAQVVTLDNGSRYEGTALLRDFRITDFTNYQAVIGHQSVTL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 ++ L + + ++ R+EFH RLT + +I ++ + Sbjct: 242 NNSDVQQMDMQTLWHSDAHDA----------RAEFHWRLTLIISVLIMAMMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFL-----FCISSI 349 RQ + +S+ + ++ F + + N P+++++L F I+ + Sbjct: 290 NPRQGR-----VLSMLPAMLLYLIFFLLQSSLRSNASKGKIDPMVWVWLTNLTYFGIAVM 344 Query: 350 FLLM 353 L Sbjct: 345 LNLW 348 >gi|94987324|ref|YP_595257.1| permease [Lawsonia intracellularis PHE/MN1-00] gi|94731573|emb|CAJ54936.1| predicted permeases [Lawsonia intracellularis PHE/MN1-00] Length = 384 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 52/364 (14%), Positives = 116/364 (31%), Gaps = 13/364 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + I R F + ++ + + + +Q +L + +L + Y++P L Sbjct: 4 LLQRQIFRESTYIFFLVVGALLTLIIINRAIQMRDLFIGLKLEILDVLILFSYMVPLFLI 63 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + MN + EL+ + +G S ++ L + ++ Sbjct: 64 LVIPIACMLGVFLTFLRMNLDKELIALKASGISIYQMLPAPLAFSFFCTLLTLWISLFWI 123 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDT 181 K ++ +F + + +P + L I + D Sbjct: 124 AWGMEQFKTTLLDIARTKVKISIQPGVFNNNFPGFVLFARQVDPLSGELHQILLEDRSQK 183 Query: 182 QTHKIYYAQSGSIDLDRQ----AIILNDGEVHRKSPISKDISIMKFKSY----TLQTESA 233 H + A +G+I+ + L +G ++ S S + F Y L T Sbjct: 184 DRHLVILAPTGTIETNPTKGELIFNLTNGNIYTMSLNKT--SFLSFDQYLVRIPLTTLLK 241 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 N + L+ + + L+ N + E HKR + + ++ A Sbjct: 242 NINFNELRPKEMSWERLI--KEYNITNTMQYQNKISVELHKRWAYPAACIALTIFALPLA 299 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + ++ + I I +G+ P L LF + ++ + Sbjct: 300 IMFEGIHRQFGLILALIMFFIYYGLMSFGFSTGESGTIPPAIGLWLPNILFFLLGLYGIY 359 Query: 354 IKKK 357 + + Sbjct: 360 LTSR 363 >gi|261819786|ref|YP_003257892.1| permease YjgP/YjgQ family protein [Pectobacterium wasabiae WPP163] gi|261603799|gb|ACX86285.1| permease YjgP/YjgQ family protein [Pectobacterium wasabiae WPP163] Length = 370 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 59/363 (16%), Positives = 136/363 (37%), Gaps = 29/363 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N+++ + G +P ++ Sbjct: 2 IIIRYLVRETFKSQLAILFILLLIFFCQKLVRILGAAVDGEIPTNLVISLLGLGVPEMVQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ G + L+K L LA+ I I+ + Sbjct: 62 LILPLSLFLGVLMTFGRLYAESEITVMHACGLGKRVLLKAALVLAVFTGIIATINVMWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +++ A+A+ + L E F + + Q +F+ R + Sbjct: 122 PWSSRHQEEVLAEAKANPGMAALVEGQFQSAQGGNAVLFVGNVKGSEFQHVFLAQLRPSG 181 Query: 183 T--HKIYYAQSGSIDLDR--QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + A G I + Q + L++G + + + +D I F +Y + Sbjct: 182 NARPSVVVADRGHITNEEGAQVVTLDNGSRYEGTALLRDFRITDFTNYQAVIGHQAVTLN 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 ++ L N + ++ R+EFH RLT L +I L+ + Sbjct: 242 NSDVQQMDMRTLWNSDAHDA----------RAEFHWRLTLILSVLIMALMVVP--LSVVN 289 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFL-----FCISSIF 350 RQ + +S+ + ++ F + + N P+++++L F I+ + Sbjct: 290 PRQGR-----VLSMLPAMLLYLIFFLLQSSLRSNASKGKIDPMVWVWLTNLMYFGIAIML 344 Query: 351 LLM 353 L Sbjct: 345 NLW 347 >gi|325295268|ref|YP_004281782.1| permease YjgP/YjgQ family protein [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065716|gb|ADY73723.1| permease YjgP/YjgQ family protein [Desulfurobacterium thermolithotrophum DSM 11699] Length = 361 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 72/356 (20%), Positives = 128/356 (35%), Gaps = 19/356 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K YI I R F+++ +F+ + + V S+ L + IP Sbjct: 3 IKIIHRYIFLEILRVFILTLGLFIFVILMDRASSIAETVFGQGVSILNFLSVLVKGIPAF 62 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M P F + V + N EL+ + + G S L KPV+FL + SI F S Sbjct: 63 LGMTIPMAFILSVLIVFIQLGNNNELVALKSCGVSTKELSKPVIFLGVAFSILSFYSLMF 122 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + PK +K+ + + F + + K P F+V Sbjct: 123 LMPKSNVAMKKEIEELVKKKITMSISPKNFSSNFPGVTFYVEKLYPEKGYLENFMVSLVK 182 Query: 181 TQTHKIYYAQSGSIDLDRQAIIL--NDGEVHRKS-PISKDISIMKFKSYTLQTESANSST 237 +A+ G + ++ + L DG + ++ ++ FK+YT++ Sbjct: 183 KDELITIFAKKGMLRTEKDTVFLDIQDGTGEFINWKKPENFKVLNFKNYTVKLYRFTKRE 242 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L L++ N + E KRL L P+I G+++ A Sbjct: 243 KFESIRYKTLPELISSN----------RIEAKVELFKRLGLSLAPLIVGILAFSLAL--- 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI--PILYLFLFCISSIFL 351 + R I + + V++ + KI N + P+L F + FL Sbjct: 290 -IIPRSSIGIGILLSLLIIVVYYILYTLTKKIALNTGIVLLPLLTDLFFFVLGGFL 344 >gi|94495766|ref|ZP_01302346.1| permease YjgP/YjgQ [Sphingomonas sp. SKA58] gi|94425154|gb|EAT10175.1| permease YjgP/YjgQ [Sphingomonas sp. SKA58] Length = 402 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 67/361 (18%), Positives = 140/361 (38%), Gaps = 16/361 (4%) Query: 5 ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 + Y+ R I L + + + + ++L + V++ ++++ ++ ++P L + Sbjct: 6 DRYLARLIAVPMLGTLVIAAMLLVLDKMLSLFDFVAAEGGPVSVVWRMLANMLPEYLSLG 65 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P + + ++EL ++ G S L++ AI L++ F ++P Sbjct: 66 IPIGLMLGILLAFRKLAMSSELDVMRAVGLSYGRLLRVPYMYAIALALINFGIVGFVQPL 125 Query: 125 CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKI-SKYNPNNTLQGIFI-VDSRDTQ 182 R + L + + + ++ F L + ++I + LQGIF+ SRD Q Sbjct: 126 SRHAYEALRFELRSGALGASIKVGEFTNLGKRMTLRIERSRDQGRNLQGIFVRATSRDGQ 185 Query: 183 THKIYYAQSGSIDLDRQAII---LNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + AQ + D +I L DG + +P K I+ F S+ L + + Sbjct: 186 SVAVTAAQGTFLATDDPDVIIFRLRDGVLVNDAPKYKTPRILSFSSHDLPIDLPQIESFR 245 Query: 240 LKANDQ--NLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ND+ + L+ N P+L R+ FH R+ + + ++ + A Sbjct: 246 GRDNDREKTIPELVVIGKNQ-ATPPKLRNEVRANFHFRMVE-----VVFMLLLPLAALAF 299 Query: 298 LVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + ++ + + LSI F V + I L+ S + L M Sbjct: 300 AIPPKRSTSALGVFLSIVFIVTYHKVNQYGESVGALGKIDPIIALWGPFLLASGLVLWMY 359 Query: 355 K 355 Sbjct: 360 H 360 >gi|78188415|ref|YP_378753.1| hypothetical protein Cag_0437 [Chlorobium chlorochromatii CaD3] gi|78170614|gb|ABB27710.1| conserved hypothetical protein [Chlorobium chlorochromatii CaD3] Length = 443 Score = 159 bits (403), Expect = 5e-37, Method: Composition-based stats. Identities = 57/333 (17%), Positives = 112/333 (33%), Gaps = 24/333 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YIL+ F + + IV + + + ++++ + Sbjct: 1 MTILDRYILKKQIAPFFFAFITIVALLQLQFFSTFAERFIGKGITFVAIVELLALQSAWM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + ++ +E+ + +G S ++ PV+ +++LLS + N+ Sbjct: 61 VSFALPMAVLVAVVMSFGTLTTTSEMTVCRASGISLYRVMVPVIVVSLLLSFTVERFNNV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 + P+ K L A+ + L E F L D + + + L+G+ I D Sbjct: 121 LLPQANYQAKSLMAEIARSKPAFGLTEQAFSTLVDGYSMYVRSSDERHGELRGVVIHDMT 180 Query: 180 DTQTHKIYYAQSGSIDLDRQA----IILNDGEVHR-KSPISKDISIMKFKSYTLQTESAN 234 + A G ++ + L +G +H+ + P M F+ Y ES+ Sbjct: 181 RPEYRTTITATRGRVEFTPDYQYLVMTLRNGAIHQLQQPEKSGYRSMNFERYRFVFESSL 240 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI---- 290 S N N EL EF +R L V L+++ Sbjct: 241 SGFTPSSGNRMR-------ADANELSAGEL-HAIGLEFRRREAVALLHVQAPLVALERLA 292 Query: 291 ------VAADKRALVRQRKKIHPIFISLSISFG 317 A +RQ +L++ G Sbjct: 293 ANTDNSKMAASPPTLRQETSAIAATKALAVIEG 325 Score = 37.2 bits (85), Expect = 3.8, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 35/82 (42%), Gaps = 4/82 (4%) Query: 262 PELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWG 321 L Y + +HK+ + L V+F L+ A L R+ ISL + F ++W Sbjct: 341 RTLYNRYMAAYHKKYSLSLACVVFVLVG---APLGVLARRGGFGVGAAISL-LFFVLYWM 396 Query: 322 FSYIIHKIEQNPYYIPILYLFL 343 K+ + P++ +++ Sbjct: 397 LMISGEKMAERGVLDPMIAMWM 418 >gi|317493503|ref|ZP_07951924.1| YjgP/YjgQ permease [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918446|gb|EFV39784.1| YjgP/YjgQ permease [Enterobacteriaceae bacterium 9_2_54FAA] Length = 356 Score = 159 bits (403), Expect = 5e-37, Method: Composition-based stats. Identities = 73/363 (20%), Positives = 145/363 (39%), Gaps = 18/363 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+ I R ++ F++FI + + ++ T +L ++L I Y + Sbjct: 1 MKLIEHYIMAEIRRLVVIIVGFLIFIFASYSAQRYLTEAANGTLALEVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L + ++E+ I G S I L K V+ LAI LSI + + Sbjct: 61 LEMLLPVGLYVSVGVALGQLYTDSEITAISAIGASPIRLYKAVMLLAIPLSILVTLMSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 P + I QL ++Q L S+L +F D I + NP+ N L + I + Sbjct: 121 ARPWAYAQIYQLEQQSQSELDVSHLRAKMFNINDSGRMILSEEINPDSNHLTDVLIY-TS 179 Query: 180 DTQTHKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 +Y A++ + ++IL+ G + D S +++ TL + N S Sbjct: 180 SGNKTSVYRAKTVDVTNPSPITPSVILHSGTGYTLRHQGTDDSERVYRNLTLDLKPLNLS 239 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + ++ + + +P + +E R ++ + + L++I R Sbjct: 240 VDAKRKAKSVIALIRSADPAD-----------YAEVQWRESRGVNAFLMALLAIS--LSR 286 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 RQ + + +++ + + G P ++L + L++I + Sbjct: 287 VKPRQGRFSTLLPLTILFTVIFYGGNVCRSLVASGYLSVTPGVWLVPMLMFIGVLVLIAR 346 Query: 357 KYT 359 ++ Sbjct: 347 DFS 349 >gi|54307698|ref|YP_128718.1| putative permease [Photobacterium profundum SS9] gi|46912121|emb|CAG18916.1| putative permease [Photobacterium profundum SS9] Length = 366 Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats. Identities = 54/345 (15%), Positives = 127/345 (36%), Gaps = 22/345 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R +S L + + + ++ + + + +++L + G +P++ Sbjct: 2 IIVRYLTRETLKSQLAVLFVLFLVFISQKFIRILADATDGSIPGDLILTLMGLYMPSMAL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L LA++ + + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIQAALLLAMITGSVAAFNSLWLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNNT-LQGIFIVD--S 178 P Q+ + + + L + F D + ++ + L+ +F+ + Sbjct: 122 PWSSEQETQVMERVESDVGLDLLVKGQFQPAPDGKGVVFVNDITDKGSKLEKVFVAQIVA 181 Query: 179 RDTQTHKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 RDT + A+ G + D RQ + L DG + P D S+ +F++Y Sbjct: 182 RDTMRPSVMVAERGYVSELDDGRQVLDLKDGTRYEGVPTRLDYSVTEFENYQALIGQRAI 241 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + L+ + R+EF R++ + L+++V Sbjct: 242 REKNRDWDALPTPTLMQHSE----------LAARAEFQWRISM-FLCI--PLLTMVVVPL 288 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN--PYYIPI 338 ++ ++ + +F ++ I F S +E P YI + Sbjct: 289 SSVNPRQGRFAKLFPAVLIYLVYFLAISAAKSAVEDGSLPSYIGL 333 >gi|90411866|ref|ZP_01219874.1| putative permease [Photobacterium profundum 3TCK] gi|90327124|gb|EAS43496.1| putative permease [Photobacterium profundum 3TCK] Length = 366 Score = 158 bits (401), Expect = 9e-37, Method: Composition-based stats. Identities = 56/357 (15%), Positives = 132/357 (36%), Gaps = 24/357 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R +S L + + + ++ + + + +++L + G +P++ Sbjct: 2 IIVRYLTRETLKSQLAVLFVLFLVFISQKFIRILADATDGSIPGDLILTLMGLYMPSMAL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L LA++ + + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIQAALLLAMITGSVAAFNSLWLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNNT-LQGIFIVD--S 178 P Q+ + + + L + F D + ++ + L+ +F+ + Sbjct: 122 PWSSEQETQVMERVESDVGLDLLVKGQFQPAPDGKGVVFVNDITDKGSKLEKVFVAQIVA 181 Query: 179 RDTQTHKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 RDT + A+ G + D RQ + L DG + P D SI +F+ Y Sbjct: 182 RDTMRPSVMVAERGYVSELDDGRQILDLKDGTRYEGVPTRLDYSITEFEDYQALIGQRAI 241 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + L+ + R+EF R++ + L+++V Sbjct: 242 REKNRDWDALPTPTLMQHSE----------LAARAEFQWRVSM-FLCI--PLLTMVVVPL 288 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN--PYYIPI--LYLFLFCISS 348 ++ ++ + +F ++ I F S +E P YI + + + +F ++ Sbjct: 289 SSVNPRQGRFAKLFPAVLIYLVYFLAISAAKSAVEDGSLPSYIGLWSINVVMFVVAI 345 >gi|109899862|ref|YP_663117.1| permease YjgP/YjgQ [Pseudoalteromonas atlantica T6c] gi|109702143|gb|ABG42063.1| permease YjgP/YjgQ [Pseudoalteromonas atlantica T6c] Length = 368 Score = 158 bits (401), Expect = 9e-37, Method: Composition-based stats. Identities = 53/367 (14%), Positives = 135/367 (36%), Gaps = 24/367 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ +S L ++ I + ++ ++ S+ +++L +P + Sbjct: 2 LIFRYLVKETVKSQTAVFLVLMAIFITNKFVRVLSEASNGDIPASLVLGFLALSMPVLAS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + ++E+ ++ G S + + +L LA+++++ I Sbjct: 62 LILPLSLFLGIMLAHGRLYVDSEMTVMRACGISEWYVTRVMLVLAVIMALITGAMTLWIA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIKISKYNPNNT-LQGIFIVD--- 177 P QL +A + L F + + I + + ++ L+ +F+ Sbjct: 122 PLSVEREYQLEEQAGADTGLTTLIPGRFQQTANEKAVIFVHEIGNDSEPLKRVFMAQHDT 181 Query: 178 SRDTQTHKIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + D+Q + YA+ G + + ++L DG + + KD +++F Y +Q Sbjct: 182 TTDSQNVHLVYAKQGGLRELPDGSETLVLGDGIQYEGTLGEKDYRVVEFGEYQIQIAEQE 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + K + L + + +E R L + I+A Sbjct: 242 AEQKRRKLSAYTTMQLFEDSSIDA----------IAELQWRFAIPL---SLFFLVIIAVP 288 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI--LYLFLFCISSIFLL 352 A ++ + +F + + + ++ K+ ++ P+ L+ I I + Sbjct: 289 LSAADPRQGRFGKMFPA-LMLYLGYFLLLLAGRKVLEDGKIPPMLGLWWVHAVIGIIGMT 347 Query: 353 MIKKKYT 359 +I K Sbjct: 348 LIFKGRP 354 >gi|308050966|ref|YP_003914532.1| permease YjgP/YjgQ family protein [Ferrimonas balearica DSM 9799] gi|307633156|gb|ADN77458.1| permease YjgP/YjgQ family protein [Ferrimonas balearica DSM 9799] Length = 372 Score = 158 bits (401), Expect = 1e-36, Method: Composition-based stats. Identities = 59/366 (16%), Positives = 134/366 (36%), Gaps = 23/366 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+L+ R+ + +V I Q ++ + + ++ + +P +L Sbjct: 2 IIFRYLLKEALRAQIAVLAVLVTIFISQQFVRILADAAEGQFPGKLVATLLALNMPELLS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + M ++E+ ++ G S + + L LA ++++ I+ + Sbjct: 62 LILPLSLFLGVMMAHGRMYADSEMTVLHAVGVSEWYVTRVTLVLAFIMALISGITAIYVA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + T Q+ KA+ + L + F R + + + L +F+ + Sbjct: 122 PWAKETEYQVLEKAESEAGLAALVQGRFQRAANGKAVIYVEGLSKGKLDTVFVAQLPEKD 181 Query: 183 TH----KIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + A+ G I + L DG K+ ++++F Y ++ +S + Sbjct: 182 DPEGETALVLAEGGRIVEGSDGSQRLQLLDGNRFSGVLNQKEYNLVQFGEYEMEIKSQEA 241 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + K + ++S L E +E H RL P+ L++++A Sbjct: 242 AHKRRKLSAYSMSQLF----------EEGSPHAWAEIHWRLAV---PIALPLLTLIAVPM 288 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP--ILYLFLFCISSIFLLM 353 + ++ K + ++ I G F G K +N P L+ I +++ Sbjct: 289 SRVNVRQGKFAKMLPAILIYLGYF-GLLMAGRKAIENGAIPPQLGLWWIHLAALVIGIVL 347 Query: 354 IKKKYT 359 I + Sbjct: 348 IGRGRP 353 >gi|82701536|ref|YP_411102.1| permease YjgP/YjgQ [Nitrosospira multiformis ATCC 25196] gi|82409601|gb|ABB73710.1| permease YjgP/YjgQ [Nitrosospira multiformis ATCC 25196] Length = 358 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 63/360 (17%), Positives = 137/360 (38%), Gaps = 26/360 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI R + F++ + + + + + + + + L +L++ Sbjct: 1 MKIIERYITRELLIPFMVVTVILATLFASFSMARFLAGAVTDSLGLIPVLRLVFLKTLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + L ++R+ E++++ + G S +I VL +AI + + + Sbjct: 61 LEVLMPIALYVAVIMGLGRLHRDQEIVVLRSAGVSEHRIIYAVLIVAIPMGLISGLFSIF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFF-RLDDDLYIKISKYNPNNTLQGIFIVDSR 179 P L+A+A+ L F+ I + + + G Sbjct: 121 ARPWAYEESYLLNAQAEAELNTDRFRAGRFYGSEKKGRVIYVQAKDSSGKQMGEVFHYLN 180 Query: 180 DTQTHKIYYAQSGS----IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + +I A+ + R I L DG ++R S K ++++F+ T+S N Sbjct: 181 KHDSSEIILAKKAHQPELVFGQRPQIHLLDGSIYRLSHTGKGDTVVQFEKLVYFTDSGNV 240 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + KA + + L+ + +E RL++ L ++ LI++ Sbjct: 241 TDYRRKAA--STAALMQSDQPRDT----------AELQWRLSRPLATILLALIAVPF--S 286 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIH------KIEQNPYYIPILYLFLFCISSI 349 RA RQ K +++ ++ F +++ S + I + P + + L S+ Sbjct: 287 RASPRQTKGDKTYYLA-ALVFAIYYILSGLAQTWVEQGTIGRVPGVWWLYAVMLLFAISL 345 >gi|196228189|ref|ZP_03127056.1| permease YjgP/YjgQ family protein [Chthoniobacter flavus Ellin428] gi|196227592|gb|EDY22095.1| permease YjgP/YjgQ family protein [Chthoniobacter flavus Ellin428] Length = 380 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 68/374 (18%), Positives = 137/374 (36%), Gaps = 20/374 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+LR FLM + I +I + N + +L+ +PTV Sbjct: 1 MNILDRYVLRSFIEPFLMCLAGFIAIWLIIDVSDNFNDFIEAHARFRTILEYYVTQLPTV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + L+ M+R EL+ G S + ++ P++ + +L++ F F Sbjct: 61 ILMSLPVGLMLGLLFSLSRMSRTNELISQLTAGRSVVRVLAPLIGVGVLMTGFCFWLNWE 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEE---NLFFRLDDDLYIKISKY---NPNNTLQGIF 174 P S K K + + +E +LF DD + K +QG+ Sbjct: 121 HAPHAESIKKDAMQKIKRGKRATDVEPVLAHLFRDRRDDRTWYVRKLIFQPGEERMQGVH 180 Query: 175 IVDSRDTQ-THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKS-YTLQTES 232 + +T K +YA S D +Q L G++ P F + + + Sbjct: 181 VTQQDETGHILKKWYASSVYYDPAKQEWKLEKGKIVTFKPDGDVEDQDLFLRGFRIIKDW 240 Query: 233 ANS----STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 + ++ L ++ L N ++ L YR+ R + L Sbjct: 241 PETPWRVASTELNPGGLSVHELHEYLKYNSDFPAVQLAPYRANLADRYALPFQCL---LA 297 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHK---IEQNPYYIPILYLFLFC 345 +AA + +R I + ++ + + S+ + + +P + P ++ + Sbjct: 298 VFLAAPLGIVYNRRGVIGGVTAAMVLLVLMIMSHSFFVMLGKGMRMDPNFSP--WVPVIG 355 Query: 346 ISSIFLLMIKKKYT 359 + I L+++ + T Sbjct: 356 LGIIGLVLMYYRST 369 >gi|149190546|ref|ZP_01868816.1| hypothetical protein VSAK1_13861 [Vibrio shilonii AK1] gi|148835670|gb|EDL52637.1| hypothetical protein VSAK1_13861 [Vibrio shilonii AK1] Length = 371 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 60/361 (16%), Positives = 129/361 (35%), Gaps = 25/361 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L L + + + Q +Q + S +++ ++G +PT+ Sbjct: 2 IIVRYLIRETVKSQLAIFLVLFLVFFSRQFIQVLADASDGDIPAGLIMTLAGISMPTMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ ++LA+L + + + Sbjct: 62 LMFPLSIYIGILVTFGRLYAESEITVMNATGIGNKFLIRAAMYLAVLTTSLAAFNAFWLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RD 180 P + Q+ + + L+ F R D + + L +F+ RD Sbjct: 122 PWTQEQEVQIRERLASENSVELLQTGSFQRTPDGSSVVFIDSIKDKKLTNVFVAQLNPRD 181 Query: 181 TQTHKIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + A+SG + RQ I L DG + P + + +F Y Sbjct: 182 SVLPSVISAKSGDVKELSDGRQVIALYDGVRYEGVPTRLEYMVTEFTDYEGVIGQREVQQ 241 Query: 238 IVLKANDQNLSFLL-NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 LL NP+P ++E H R++ V L++++ Sbjct: 242 RGRSWMAIPTMELLGNPDP-----------KAQAELHWRIS---LVVCIPLLTMLVVPLS 287 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-----YIPILYLFLFCISSIFL 351 A+ ++ K + ++ F F S + +E + P+ + L + Sbjct: 288 AVNPRQSKFAKMGPAILAYFAYFMAISAMKSALEDGAFPSYIGLWPVNFALLLAAIGVNT 347 Query: 352 L 352 Sbjct: 348 W 348 >gi|71279918|ref|YP_267491.1| putative permease [Colwellia psychrerythraea 34H] gi|71145658|gb|AAZ26131.1| putative permease [Colwellia psychrerythraea 34H] Length = 388 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 60/370 (16%), Positives = 136/370 (36%), Gaps = 22/370 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+L+ + ++ L ++ I + ++ + S + +++ IP + Sbjct: 2 IIFRYLLKEVAKTQLAVFFVLMTIFISQKFVRVLGDASEGSIPGQLVMTFIALKIPDLAG 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + + ++E+ ++ G S +++ L LA++ +IF I + Sbjct: 62 FILPLSLFLGVLLAYGRIYADSEMTVLHACGVSEWYVVRVTLVLAVITAIFTGIFTLYLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIKI-SKYNPNNTLQGIFIVDSRD 180 P ++ + S L F + + D + I K N+ +F+ Sbjct: 122 PLASEYQYKVKEELAADSGLSALVSGRFQQTGNQDAVVFIHDKDRETNSFNKVFVAQLPK 181 Query: 181 TQ-------THKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQT 230 + YA++G + D ++L DG + + SK+ + F Y +Q Sbjct: 182 GDNVDASIINSSLVYAKTGKVFEDDTGSQQLVLGDGIRYHRDIESKEFQSVAFNKYYIQI 241 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 + K + + L N P PEL YR+ R+ L +I + Sbjct: 242 KDQEVEHQHRKLSAISTLELYNNMP------PELESAYRATIQWRIAFPLACII---LIF 292 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSI 349 +A + ++ K + +L + G + + IE+N + L+ I Sbjct: 293 IAVPLSVVNPRQGKFAKMLPALMLFLGYLLLLTSMRSAIEKNAIPSVVGLWPIHISALFI 352 Query: 350 FLLMIKKKYT 359 ++++ K+ + Sbjct: 353 GMMLLMKERS 362 >gi|320107369|ref|YP_004182959.1| permease YjgP/YjgQ family protein [Terriglobus saanensis SP1PR4] gi|319925890|gb|ADV82965.1| permease YjgP/YjgQ family protein [Terriglobus saanensis SP1PR4] Length = 782 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 56/363 (15%), Positives = 137/363 (37%), Gaps = 15/363 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQIL-QRINLVSSSTESLNILLKISGYLIPT 59 M+ YILR + ++ F+ ++ + L + L + + N + +I Y +P Sbjct: 1 MRILTRYILREVVSHAMLGGALFTFVLFMQRDLGHILELAVRGSATPNDVGRILLYSLPA 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 L P + L ++ ++E+ + +G + ++ V ++ + ++ Sbjct: 61 TLTFTIPMTVLVGILLGLGRLSADSEVTAMRASGFGVMQFVRVVSMSTVVALLVGLVNSL 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN---TLQGIFIV 176 I PK +++ +L + + ++ +F+ + + + P+ + +F+ Sbjct: 121 YIAPKSTASLLRLENDLKSSQASFEVQPRVFYEDFKNYVLYVQDTQPSQGATIWKHVFLA 180 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKD-ISIMKFKSYTLQTES 232 D T I A + + +Q + DG H+ SP + +I F + ++ Sbjct: 181 DLTQPATPYITTANQAVVAVGKQQTLRLHFMDGSTHQISPTDPNQYNISTFAENDVPMQA 240 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 I L +D ++ + P+ E ++RL+ +P+ ++ +V Sbjct: 241 GQQEDIKLTRSDAPMAAMTAGQLWQAQPGPQRRAAMI-ELNRRLS---YPIACVVLMLVG 296 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN---PYYIPILYLFLFCISSI 349 R+ K +++ + F ++ S + +Q P LF + + Sbjct: 297 VPLGLSSRRGGKSTGFVLTIVLVFLYYFLSSVGVALAKQGKLHPVIGVWAANVLFGFAGV 356 Query: 350 FLL 352 LL Sbjct: 357 LLL 359 Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats. Identities = 46/370 (12%), Positives = 125/370 (33%), Gaps = 26/370 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y++R S + + ++ V + I + + L + LIP ++ Sbjct: 418 LLDDYVMREFLTSLALVLSSFLVLSVVFSFFELIGDIIRNRTPLVTVGGYLLNLIPYMIY 477 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +TP C + + +NR++EL + +G S ++ P+ LA +L++ LF +++ Sbjct: 478 SLTPLCALIAVLVTVGGLNRSSELTAMKASGMSLYRIVAPIFVLAAVLAVGLFAFDDLYL 537 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEE------NLFFRLDDDLYIKISKYNPNN-TLQGIFI 175 P+ + L ++ + ++L ++ + + + Sbjct: 538 PQANRRQEALRSEIKGKPAQTFLRPDRKWISGQEANGSPTRIFYYQFFDSDKDVFANLTV 597 Query: 176 VDSRDTQT--HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 + + + +A S + Q + +G + SI ++ + T Sbjct: 598 FEFQPGSFLLQRRIFATSARWNPQVQQWEMENGWQRTFNHE----SIATYQPFATSTFPE 653 Query: 234 NSSTIVLKANDQNLSFLLNPNP-----NNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 + S ++ ++ R + + ++ L ++ + Sbjct: 654 IHELPAYFKKESRPSQEMSYGDLSAYIHDLKQSGFDTMRLRVQLNHKIAYPLMTLVMAIF 713 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF----LF 344 ++ A +R + ++ ++ S + P+L + LF Sbjct: 714 AVPFAMMMG---KRGSLAGYATAIGMAIAYQLIASVF-ESMGNVNALPPMLAAWSVDLLF 769 Query: 345 CISSIFLLMI 354 + +LL+ Sbjct: 770 ALGGTYLLLR 779 >gi|319789793|ref|YP_004151426.1| permease YjgP/YjgQ family protein [Thermovibrio ammonificans HB-1] gi|317114295|gb|ADU96785.1| permease YjgP/YjgQ family protein [Thermovibrio ammonificans HB-1] Length = 359 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 64/296 (21%), Positives = 99/296 (33%), Gaps = 13/296 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YI I R +S +F+ + + V S L + +P Sbjct: 1 MKVLHRYIAFEITRVAALSSALFLFVILMDRASTIAETVLGKGVSFLDFLSVLAKGLPAF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L +V P F + V MN N EL + G S L KPV L ++ S+ F S Sbjct: 61 LGIVIPMSFVLSVVIVFIGMNSNNELTAAKSCGISLKELSKPVFLLGLIFSLLSFYSLMF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + PK +K+ + + E F + + K P L F+ + Sbjct: 121 LAPKSNVAMKRELEELLRKKITLSITEKRFSSNFPGVTFYVEKLYPEKGLLVNFMASLQK 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIIL--NDGEVHRKS-PISKDISIMKFKSYTLQTESANSST 237 + + + G + + L DG K+ +KFKSYT++ Sbjct: 181 KEKLVTAFGRRGFLRTKGDTVFLDIEDGSAQVVDWKKPKEFKFIKFKSYTVELYKFTRKE 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 A + L LL E + R KR +I G+I A Sbjct: 241 RFKAAKYKTLFQLL----------KERDKEARVAVVKRTALAFASLIVGIIGFSIA 286 >gi|119356768|ref|YP_911412.1| permease YjgP/YjgQ family protein [Chlorobium phaeobacteroides DSM 266] gi|119354117|gb|ABL64988.1| permease YjgP/YjgQ family protein [Chlorobium phaeobacteroides DSM 266] Length = 442 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 60/259 (23%), Positives = 105/259 (40%), Gaps = 11/259 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y+L+ F+ + + I+F+ + + LL++ + Sbjct: 1 MKIIDRYLLKSHIGPFIFAFITILFVLILQFFAVFSERLLGKGIGWMTLLELVVVQSAWM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + +M +E+ I +G S L+ PVL A LLS+ N+ Sbjct: 61 VSFTIPMAVLIAVVMAFGAMTNASEITIFRASGISLYRLMAPVLLAATLLSLVAERFNNV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 + P+ K L A + L EN F L D I + + +P ++GI I D Sbjct: 121 VLPEANYKAKSLMADIVKSKPVFGLTENAFSTLIDGYSILVRQTDPETGAIRGIVIYDFT 180 Query: 180 DTQTHKIYYAQSGSIDLDRQA----IILNDGEVHR-KSPISKDISIMKFKSYTLQTESA- 233 I A+SG ++ I L +GE+H + P K+ M FK + ES+ Sbjct: 181 RPDFRTIVTAESGGVNFSSDYHYLIITLENGEIHEIQQPQHKEYRKMSFKKHRFVFESSG 240 Query: 234 ----NSSTIVLKANDQNLS 248 S ++++D++LS Sbjct: 241 FGFNRSVESAIRSDDRDLS 259 Score = 42.3 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 36/93 (38%), Gaps = 6/93 (6%) Query: 266 ETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYI 325 Y +E+HK+ ++F L+ A L R+ +SL F ++W Sbjct: 344 NKYMAEYHKKYALAFACIVFALVG---APLGVLARRGGFGIGAGLSLVF-FVLYWILMIS 399 Query: 326 IHKIEQNPYYIPI--LYLFLFCISSIFLLMIKK 356 K+ + P ++L I I L ++ + Sbjct: 400 GEKLAERGLLDPGLSMWLGNITIGFIGLFLLYR 432 >gi|294102483|ref|YP_003554341.1| permease YjgP/YjgQ family protein [Aminobacterium colombiense DSM 12261] gi|293617463|gb|ADE57617.1| permease YjgP/YjgQ family protein [Aminobacterium colombiense DSM 12261] Length = 365 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 56/350 (16%), Positives = 135/350 (38%), Gaps = 15/350 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRI-NLVSSSTESLNILLKISGYLIPTV 60 + +I + + SF+ + + +L +I +++ S+ ++L++ Y +P V Sbjct: 5 GILDRFIWKEMAGSFVFGVMAFTMVFVAGDLLFQIASMIIEKGISIGVVLRLFIYSLPEV 64 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + ++ N+E++ + +G S ++KPV+ ++L+ + I Sbjct: 65 IILTLPMACLLSALLTFGKLSTNSEIVALKASGISFQRILKPVIVGSLLVGLSALILNET 124 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD----LYIKISKYNP-NNTLQGIFI 175 + P + L + S L+E +F R + + I I K P T+ + + Sbjct: 125 VVPFSNRAAENLMRFEVMREKPSVLKEQVFLRDESNGQLNRVIYIEKLQPRKGTMTNVLV 184 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKS--YTLQTESA 233 + + +I ++G + ++DGEV + + K + +F+ + L Sbjct: 185 QEFEKGKLKRITVGKTGLWKDGK--WWIDDGEVFQVTNGGKVELLFRFERQQFDLNLSPQ 242 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 K ++ + L+ + L FH R V+ ++I+ A Sbjct: 243 QVEQASRKPSEMSALELMAQ-IRLLQAQGGNLAPLWVLFHLRFAVPWASVV---LAILGA 298 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 + +S+ I F V++ + + + P+L ++ Sbjct: 299 SLGVRSHRTGSGVGFGLSVMIVF-VYYVVMSLCKAFGETEHMPPLLAAWV 347 >gi|124006213|ref|ZP_01691048.1| putative permease, YjgP/YjgQ family [Microscilla marina ATCC 23134] gi|123988137|gb|EAY27795.1| putative permease, YjgP/YjgQ family [Microscilla marina ATCC 23134] Length = 491 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 53/286 (18%), Positives = 113/286 (39%), Gaps = 20/286 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + +L+ F+++ +VFI V Q+LQ ++ S + ++ Y + Sbjct: 1 MKKIDKLVLQSFFGPFILTLSVLVFIFLVQQLLQYLDEFMGKGLSYLVFAELVFYFSLHI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +PMV P + + ++ + EL + ++G S I ++ P+ + + ++ F N Sbjct: 61 IPMVLPLATLLASLITFGNLGEHHELTAMKSSGISLIRVLTPLFMVVVCFAVVSFWFNNS 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 I PK L + ++E F+ + IK++ P+ TL+ + I D Sbjct: 121 IVPKANLDAYSLLYDIRQTKPALDIKEGAFYGGIPNYSIKVNHKFPDGRTLKDVIIYDHS 180 Query: 180 D-TQTHKIYYAQSGSI----DLDRQAIILNDGEVHRKSPISKDI-------------SIM 221 ++ A SG + + A L G + + P + S M Sbjct: 181 GRRGNKQVILADSGQMYTFDKGNFLAFELFKGVRYHELPTREGARPSEEFLKSKFKHSKM 240 Query: 222 KFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLET 267 F + ++ + + +N++ L N + ++ + + LE Sbjct: 241 IFSLESFNMDTTDKNLFKSNKIMRNVTEL-NKDIDSLTRKRKDLEA 285 >gi|50119363|ref|YP_048530.1| putative permease [Pectobacterium atrosepticum SCRI1043] gi|49609889|emb|CAG73324.1| putative permease [Pectobacterium atrosepticum SCRI1043] Length = 371 Score = 157 bits (396), Expect = 4e-36, Method: Composition-based stats. Identities = 56/364 (15%), Positives = 137/364 (37%), Gaps = 30/364 (8%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N+++ + G +P ++ Sbjct: 2 IIIRYLVRETFKSQLAILFILLLIFFCQKLVRILGAAVDGEIPTNLVISLLGLGVPEMVQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ G + L+K L LA+ ++ I+ + Sbjct: 62 LILPLSLFLGVLMTFGRLYAESEITVMHACGLGKRVLLKAALILAMFTAVIATINVMWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +++ A+A+ + + L E F + + Q +F+ R + Sbjct: 122 PWSSMHQEEVLAEAKANPSMAALVEGQFQSAQGGNAVLFVGNVKGSEFQHVFLAQLRPSG 181 Query: 183 T--HKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A G I + Q + L++G + + + +D I F +Y + Sbjct: 182 NARPSVVVADRGHITQNEDGAQVVTLDNGSRYEGTALLRDFRITDFTNYQAVIGHQTVTL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L + + ++ R+EFH RLT + +I L+ + Sbjct: 242 NNSDVQQMGMQALWSSDAHDA----------RAEFHWRLTLIVSVLIMALMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFL-----FCISSI 349 RQ + +S+ + ++ F + + N P+++++L F I+ + Sbjct: 290 NPRQGR-----VLSMLPAMLLYLIFFLLQSSLRSNASKGKIDPMVWIWLTNLMYFGIAVM 344 Query: 350 FLLM 353 L Sbjct: 345 LNLW 348 >gi|238897461|ref|YP_002923138.1| putative permease [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465216|gb|ACQ66990.1| putative permease [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 364 Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats. Identities = 62/364 (17%), Positives = 129/364 (35%), Gaps = 25/364 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ I ++ + + FI + +++ ++ + + +++ + G + Sbjct: 2 VITKYLIKEILKTQVAILFILSFIFFSQKLVTILDDIINHDIPAHLIFSLLGLGFAKMAE 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + +E++ + G + LIK L LA L S+F I+ Sbjct: 62 LILPLSLFFALLMTYGKLYNESEIIAMYACGVGKTRLIKVALVLAALTSLFATINVFYFS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT- 181 P K++ + ++ S L + F D + + N IF+ Sbjct: 122 PWSVKHEKKIINEERVNPGLSALVKGQFQSSPDGKIVLFIQDIQNKKFHKIFLAQRESNH 181 Query: 182 -QTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 Q + A SG I + LN G + P D I F Y + + Sbjct: 182 TQRPTVVVANSGYISAPAPGIQLLTLNHGMNYEGIPPLGDFRITYFNHYQAVISRKSVTK 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 A ++S L N + R+E H RLT + VI +++ + Sbjct: 242 NSNTAQQMSMSSLWEANDPDT----------RAELHWRLTLIVSVVIMAFMAVP--LSQV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFLFCISSIFLLMI 354 RQ + +S+ + ++ F + + N P+++L+L L +I Sbjct: 290 NPRQGR-----VLSMLPAMLLYLIFFLLQSTLRSNAGNNRLDPLIWLWLVNGLYTILAII 344 Query: 355 KKKY 358 + Sbjct: 345 LNIW 348 >gi|86605800|ref|YP_474563.1| YjgP/YjgQ family protein [Synechococcus sp. JA-3-3Ab] gi|86554342|gb|ABC99300.1| putative membrane protein, YjgP/YjgQ family [Synechococcus sp. JA-3-3Ab] Length = 376 Score = 156 bits (395), Expect = 5e-36, Method: Composition-based stats. Identities = 61/356 (17%), Positives = 133/356 (37%), Gaps = 16/356 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 E Y+ + L + ++ + + +L++ +P ++ Sbjct: 10 LLERYLFGQMLTPVLAGIAGGTLLLLAGRLFTLAERLVEGSVPPLTVLRLLILDLPEMVL 69 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P T L ++ N+E+ + G + +P+L + +L+S+ F N++ Sbjct: 70 LGMPIAAFFATMLTLGKLSGNSEITAMRAAGIPFTRIFRPLLLVGLLMSLSAFWISNVLL 129 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLD------DDLYIKISKYNPN-NTLQGIFI 175 P + I+Q+ +A LA + ++ ++FFR D+L+ I + +P NT+Q + I Sbjct: 130 PASKREIRQIDQQALLARATTPVQYDVFFRTARVGGTEDNLWFFIRQVDPRLNTMQDVTI 189 Query: 176 VDSRDTQTHKIYYAQ---SGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 + K A+ + + L++G HR P ++ F L+ Sbjct: 190 LQVDPLPGGKYQLAEVTLAAQAVWNGLDWTLSEGVTHRYGPDGLSLAEEPFDRKPLEVSQ 249 Query: 233 ANSS--TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 ++ + N+ +L L + + R+EFH R + L LIS+ Sbjct: 250 DLAALMQPPVPPNELSLPELAER-ISRLARSNLNTQPLRTEFHMRFSLPLASFFAVLISL 308 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCI 346 R+ + + + + F + S + + + P + F I Sbjct: 309 PLGST--TARRVGRYGGVVFGILLVFAYYVVLS-VSRSLGEAGALPPWAAAWSFNI 361 >gi|298369121|ref|ZP_06980439.1| permease, YjgP/YjgQ family [Neisseria sp. oral taxon 014 str. F0314] gi|298283124|gb|EFI24611.1| permease, YjgP/YjgQ family [Neisseria sp. oral taxon 014 str. F0314] Length = 371 Score = 156 bits (395), Expect = 5e-36, Method: Composition-based stats. Identities = 48/364 (13%), Positives = 146/364 (40%), Gaps = 19/364 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ ++ + + + + ++ + Q + + + +++ + + G+ + + P Sbjct: 2 IYQRNFIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAVDAVAALVGFWVIGMTP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ ++ + + + + Sbjct: 62 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFALLIAVMQLWVM 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLD---DDLYIKISKYNPNNTLQGIFIVDSR 179 P ++ + + S +E F L D +Y + + ++ +F+ + Sbjct: 122 PWAELRSREYAEILKQKQELSLVEAGEFNSLGKRSDRVYFVETFDTESGIMKNLFLRELD 181 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 I +A+ G ++ +++ + L +G + P D + + F+ ++ + Sbjct: 182 KNGNDNIIFAKEGNFALTDNKRTLELRNGYRYSGKPGRADYNQVSFEHLSMIISTTPKIV 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + A+ + + +NP Y+ +E RL+ P+ L+S++A Sbjct: 242 DPI-AHRRTIPTAKLFGSDNPQYQ--------AELMWRLS---LPISVLLLSMLAVPLSY 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP--YYIPILYLFLFCISSIFLLMIK 355 + + I I++ + G +++ +E ++ +L + + I +L+ Sbjct: 290 FNPRTGHTYNILIAIGMFLIYQNGLTFLRDAVEDGKIHFWFGMLPMHILMIVIAVVLLRV 349 Query: 356 KKYT 359 + Sbjct: 350 RSMP 353 >gi|71083418|ref|YP_266137.1| permease YjgP/YjgQ family protein [Candidatus Pelagibacter ubique HTCC1062] gi|71062531|gb|AAZ21534.1| Predicted permease YjgP/YjgQ family protein [Candidatus Pelagibacter ubique HTCC1062] Length = 378 Score = 156 bits (395), Expect = 5e-36, Method: Composition-based stats. Identities = 67/367 (18%), Positives = 126/367 (34%), Gaps = 18/367 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + + FL+ I I WV+Q + ++ V + K + P ++ Sbjct: 3 KIVYKKLSKDCVNFFLLVVFTISIIIWVLQAVNYLDFVIEDGHGFLVYFKYTLLSFPKII 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF + + +L EL+I N G +I I + ++ + + +I Sbjct: 63 SRIFPFAIFLAFSYILLKYENKNELVIFWNFGIKKINFINFFIKFSLWFVLISLLLNAVI 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + + L S L+ F + +L I + N L IF+ + D Sbjct: 123 TPFAQDKARSFIRSSNLDFFESVLKPKKFIDIIGNLTIYFDEKNKKGELINIFLNEKTDI 182 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL- 240 + +A++ +++D IL + + I+ IS +F NS+TI Sbjct: 183 NNSQTTFAKTAIVNIDNNKKILTLYDGKSINVINGKISEFEFSKTDYNISKFNSNTITYQ 242 Query: 241 KANDQNLSFLLNPN---------------PNNPNYRPELLETYRSEFHKRLTQWLFPVIF 285 K + L+ + N N R + L+ E + RL + L+ Sbjct: 243 KTQEAKTINLIKCSLFFNGSIINSTNIEIENIKNCRLDNLKNVYKELYSRLVKPLYITFL 302 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC 345 IS++ K + F +F I N L +F Sbjct: 303 ISISLLFILKSKSDHSFNINKFKIYLFAFLFIIFL--ESSSKLISTNLMQNIFLSIFPLI 360 Query: 346 ISSIFLL 352 ++ I L Sbjct: 361 LTLIIYL 367 >gi|86609743|ref|YP_478505.1| YjgP/YjgQ permease [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558285|gb|ABD03242.1| putative permease, YjgP/YjgQ family [Synechococcus sp. JA-2-3B'a(2-13)] Length = 362 Score = 156 bits (395), Expect = 5e-36, Method: Composition-based stats. Identities = 62/362 (17%), Positives = 125/362 (34%), Gaps = 16/362 (4%) Query: 5 ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 E Y+ + + R F + + Q+ +L+ +L I +P +L + Sbjct: 2 EFYLFKEMIRPFFLGVAGGTVMMLGNQLFIYTDLLVKKGAPPLTILHILLLNLPAILVVT 61 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P T L M ++E+ + G + PVL + +L+S ++ +I P+ Sbjct: 62 FPIAGLFTTLLTLGKMGADSEITALRAAGIPYRKVFIPVLCIGLLISGLALLTNEVIVPE 121 Query: 125 CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSRDTQT 183 +K L+ LA R+DDDL+ + +P +Q + I+D + Sbjct: 122 TNQKVKILNKNLILAQDALLFNPEEIVRVDDDLWFHVGSIDPKTGLMQDLLILDRKAETG 181 Query: 184 ----HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 ++ AQ+ Q+ L D + R + + + L + + Sbjct: 182 HLRYPQVISAQTAQQV--GQSWQLRDVVIRRYDEQGRTYYEGQVEEMQLNIVNKLVGLVY 239 Query: 240 LK--ANDQNLSFLLNPNPNNPNYRPELLETYR--SEFHKRLTQWLFPVIFGLISIVAADK 295 + +Q L + + R +E+H + L F I + A Sbjct: 240 AEKVPQEQRAGELWEQCQRYRAEQRPSADVARCLTEYHLKFAIPLA--SFFAILVAAPLG 297 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFS---YIIHKIEQNPYYIPILYLFLFCISSIFLL 352 VRQ + + +++ + F + S + +P+ L +F LL Sbjct: 298 LQTVRQTGRYGGVALAIVLVFIYYVLMSLGRAMGRVEHIDPWLAAWLPNMIFGGVGFSLL 357 Query: 353 MI 354 Sbjct: 358 WR 359 >gi|282856200|ref|ZP_06265483.1| putative membrane protein, YjgP/YjgQ family [Pyramidobacter piscolens W5455] gi|282585959|gb|EFB91244.1| putative membrane protein, YjgP/YjgQ family [Pyramidobacter piscolens W5455] Length = 368 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 66/369 (17%), Positives = 139/369 (37%), Gaps = 18/369 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQIL-QRINLVSSSTESLNILLKISGYLIPTV 60 ++ + +I+R + FL + I +L + +L+ SL + ++ Y +P+V Sbjct: 5 RTLDRFIMRELMGPFLFGVMAFTLIMVAGGLLFKLADLIIEQGVSLGVAGRLFIYELPSV 64 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + + + M+ N+E++ + G S + +PVL A+ +++ Sbjct: 65 VVLTLPMSCLLASLLGFSKMSANSEIVALKAAGISFSRIGRPVLVAALGVTMLSLALNET 124 Query: 121 IEPKCRSTIKQ-LSAKAQLALTFSYLEENLFFRLDD------DLYIKISKYNP-NNTLQG 172 + P + + + + L+E +F R D + I+K + T+ Sbjct: 125 VVPLGKIAAQNVMRYEVAREKPA-LLKEQVFLRSSDPSSEGLRRIVYINKLYARSGTMDD 183 Query: 173 IFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL--QT 230 + + + + ++ A+ G+ L+DG+V + FK L + Sbjct: 184 VVVQEFKGADLVRLTTARKGTWVDG--VWYLDDGDVFEVKGRDTVELTLHFKRQALPIRL 241 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 S K +D + L+ + + LE FH RL VI LI Sbjct: 242 TPQQISRSTAKPDDMSCLELIK-YIEILRAQGKSLEPLWVAFHLRLAVPWACVILALIG- 299 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 AA +R+ S+ I F V++ + + Q + P+L +L I Sbjct: 300 -AALGVRPMRKGGASVGFGQSILIVF-VYYVVMSMGRSLGQAGHIPPVLGAWLPNILFFA 357 Query: 351 LLMIKKKYT 359 ++ + Sbjct: 358 GALLLARRA 366 >gi|332187157|ref|ZP_08388897.1| hypothetical protein SUS17_2305 [Sphingomonas sp. S17] gi|332012857|gb|EGI54922.1| hypothetical protein SUS17_2305 [Sphingomonas sp. S17] Length = 399 Score = 156 bits (394), Expect = 6e-36, Method: Composition-based stats. Identities = 55/359 (15%), Positives = 127/359 (35%), Gaps = 8/359 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MKS + Y+ R I + + + + +I + V++ ++++ ++ L+P Sbjct: 1 MKSIDRYMARLIALPLFATLIIAAMLLVLDRIRRLFEFVATEGGPISVVWRMLANLLPEY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + + ++EL ++ G S L++ AI+L+ Sbjct: 61 LGLGIPIGLMLGILLAFRRLATSSELDVMRGVGMSYTRLLRVPYMYAIVLAALNLAIVGY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISK-YNPNNTLQGIFIVDSR 179 ++P R + L + + + ++ F L + + ++I + + L GIF+ + Sbjct: 121 VQPIARYYYEGLRYELRTGALGASIKVGEFTHLGNRMTLRIEESRDSGRDLSGIFVHANT 180 Query: 180 DTQTHKIYYAQSGS-IDLDRQAII---LNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 A+ G + D +I L +G + P + ++ F S+ L + Sbjct: 181 SKGDWIGVTAERGRFLATDDPNVIIFRLTNGTLIHNRPEFRAPRVLTFSSHDLPIDLPKF 240 Query: 236 STIVLK-ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + D + + E R+EFH RL + + + L+++ Sbjct: 241 DNFRQRGGRDLEFTLPELAKLGHEAPSAEARAGSRAEFHFRLVEVVTMFLLPLLAVSLGI 300 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + + L V + I +P L++ + + M Sbjct: 301 PPKRSTSALGVFLSIVMLVTYHKVNQYAADIGALGRVDPLIA--LWVPFAIFAGLVGWM 357 >gi|218440672|ref|YP_002379001.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 7424] gi|218173400|gb|ACK72133.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 7424] Length = 388 Score = 155 bits (393), Expect = 7e-36, Method: Composition-based stats. Identities = 57/359 (15%), Positives = 130/359 (36%), Gaps = 22/359 (6%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + Y+ + FL + + + + V+ S SL + L+I +P Sbjct: 17 SIVDRYLFMELLIPFLFGMGLFTSLGIAIGTLFDLVRKVTESGLSLTVALQILSLKMPEF 76 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + T + + ++EL+ + + G S L+ P + L+++++ F + Sbjct: 77 IVLAFPMSILLATLMAYSRLASDSELIALRSIGLSPYRLLVPSIILSLMVTGVTFFFSDY 136 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLY-------------IKISKYNPN 167 + P+ KQ+ A A +++E+N+ + + K++ Sbjct: 137 VAPQATQQAKQILADALKKDQPAFVEDNIIYPEYRKITLENGRDQTVLTRLFYAEKFD-G 195 Query: 168 NTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 +QG+ I+D ++I +QS +LD + +G ++ +P +I++F+ Sbjct: 196 QQMQGLTILDRSQPGVNQIVTSQSAMWNLDSNSWDFYNGTIYLIAPDGSYRNIVRFQHQK 255 Query: 228 LQTESANSSTIVLK--ANDQNLSFLLNPNPNNPNYRPELL-ETYRSEFHKRLTQWLFPVI 284 L A K + +++ + E ++ ++ Sbjct: 256 LDLPRAPLDIAKGKQNPAEMSIAEAKEYLRIVKLSKNEPRARKVEVRIQEKYALPFVCIV 315 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 FGLI K Q F I ++ S+I + P++ +L Sbjct: 316 FGLIGSAIGLKP----QNNNKATSFGICIILIFSYYLLSFIASSMGIWGIISPVVSAWL 370 >gi|91762159|ref|ZP_01264124.1| Predicted permease YjgP/YjgQ family protein [Candidatus Pelagibacter ubique HTCC1002] gi|91717961|gb|EAS84611.1| Predicted permease YjgP/YjgQ family protein [Candidatus Pelagibacter ubique HTCC1002] Length = 378 Score = 155 bits (393), Expect = 7e-36, Method: Composition-based stats. Identities = 67/367 (18%), Positives = 125/367 (34%), Gaps = 18/367 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + + FL+ I I WV+Q + ++ V + K + P ++ Sbjct: 3 KIVYKKLSKDCVNFFLLVVFTISIIIWVLQAVNYLDFVIEDGHGFLVYFKYTLLSFPKII 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF + + +L EL+I N G +I I + ++ + + +I Sbjct: 63 SRIFPFTVFLAFSYILLKYENKNELVIFWNFGIKKINFINFFIKFSLWFVLISLLLNAVI 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + + L S L+ F + +L I + N L IF+ + D Sbjct: 123 TPFAQDKARSFIRSSNLDFFESVLKPKKFIDIIGNLTIYFDEKNKKGELINIFLNEKTDI 182 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL- 240 + +A++ +++D IL + + I+ IS +F NS+T Sbjct: 183 NNSQTTFAKTAIVNIDNNKKILTLYDGKSINVINGKISEFEFSKIDYNISKFNSNTTTYQ 242 Query: 241 KANDQNLSFLLNPN---------------PNNPNYRPELLETYRSEFHKRLTQWLFPVIF 285 K + L+ + N N R + LE E + RL + L+ Sbjct: 243 KTQETKTINLIKCSLFFNGSIINSTNIEIENIKNCRLDNLENVYKELYSRLVKPLYITFL 302 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC 345 IS++ K + F +F I N L +F Sbjct: 303 ISISLLFILKSKSDHSFNINKFKIYLFAFLFIIFL--ESSSKLISTNLMQNIFLSIFPLI 360 Query: 346 ISSIFLL 352 ++ I L Sbjct: 361 LTLIIYL 367 >gi|217966587|ref|YP_002352093.1| permease YjgP/YjgQ family protein [Dictyoglomus turgidum DSM 6724] gi|217335686|gb|ACK41479.1| permease YjgP/YjgQ family protein [Dictyoglomus turgidum DSM 6724] Length = 364 Score = 155 bits (393), Expect = 8e-36, Method: Composition-based stats. Identities = 67/366 (18%), Positives = 139/366 (37%), Gaps = 14/366 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K++ YI I F + + + + + + + + S ++LK+ Y IP++ Sbjct: 5 IKTYHKYIFSEILGPFFLGIFGFILVMLIQILYEFSDFIIMRRVSFEVVLKLLYYKIPSL 64 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 V P + R+ E+ + ++G ++L L +ILLS+ L+ Sbjct: 65 FVFVIPVSLLFAIIFSFGRLMRDGEIFAMRSSGIYFLSLTLTPLLFSILLSLILWFFTYS 124 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISK-YNPNNTLQGIFIVDSR 179 + P+ +L K EN+FF ++ Y + K N +Q + + D+ Sbjct: 125 LIPESNYRSNRLIQKYFFLNPAPIKGENVFFHDEEGRYYYVKKIIENRNVMQNVLVFDTS 184 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + I Y +I +R ++IL +G VH S + KF+ + + Sbjct: 185 SSNKYPIIYTAEEAI-WNRDSLILKNGVVHHLGDDSFVVWEGKFEEFKINLPQDFMYIFY 243 Query: 240 LK--ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + L N +Y E + R+ Q + IF L+ Sbjct: 244 RDRTPQEMPTNELKKR-INVYKKAGISARSYLVEDYLRIAQSIAVPIFALMGFSVILLTG 302 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSI---FLL 352 + ++ S+ I+F ++GF+ I + + P L +L + S+ + Sbjct: 303 ---RGGRLWGTAFSIIIAF-FYYGFNIIARSFGEYAVFSPFLSAWLPNITLGSLSLGVFI 358 Query: 353 MIKKKY 358 +K+ Sbjct: 359 WKVRKW 364 >gi|301325676|ref|ZP_07219137.1| conserved hypothetical protein [Escherichia coli MS 78-1] gi|300847531|gb|EFK75291.1| conserved hypothetical protein [Escherichia coli MS 78-1] gi|323966511|gb|EGB61944.1| permease YjgP/YjgQ family protein [Escherichia coli M863] gi|327251764|gb|EGE63450.1| hypothetical protein ECSTEC7V_3616 [Escherichia coli STEC_7v] Length = 356 Score = 155 bits (392), Expect = 9e-36, Method: Composition-based stats. Identities = 76/370 (20%), Positives = 139/370 (37%), Gaps = 32/370 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + +N L + I + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDVLIY-TS 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +I+ A+S + SP + + +Y L + + + + Sbjct: 180 TANRTRIFRARSVDVVD--------------PSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLE----------TYRSEFHKRLTQWLFPVIFGLIS 289 +NL LNP +PN + + +E R ++ L + Sbjct: 226 Y----RNLQLHLNPLDQSPNVKRKAKSVTELARSAFPADHAELQWRQSRGLT--ALLMAL 279 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 + + R RQ + + ++L + G IP L+L + Sbjct: 280 LAISLSRVKPRQGRFSTLLPLTLLFVAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMG 339 Query: 350 FLLMIKKKYT 359 L+++ + ++ Sbjct: 340 LLMLVARDFS 349 >gi|255658902|ref|ZP_05404311.1| permease, YjgP/YjgQ family [Mitsuokella multacida DSM 20544] gi|260848851|gb|EEX68858.1| permease, YjgP/YjgQ family [Mitsuokella multacida DSM 20544] Length = 364 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 52/375 (13%), Positives = 147/375 (39%), Gaps = 28/375 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPT 59 ++ + YI R + ++F+ + + + ++ SL+ ++K+ + +P+ Sbjct: 3 IRILDKYIFREVFKAFIFGICAFSAVFIGSGTLFKIAKYITDYGASLSAVIKVFVFGLPS 62 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 V+ P + T ++ ++E+ + + G + P + + L+SI Sbjct: 63 VIMWTFPMSMLLATLLTFGRLSSSSEITAMKSCGIGFYRIAAPAVIMGFLVSIGAIAFNE 122 Query: 120 IIEPKCRSTIKQLSA---------KAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NT 169 + P + + + K+Q + +++ RL + +Y+ + T Sbjct: 123 YVVPWANTAYRNVVYYEIQGNNGMKSQEHIILKDIQDGKIQRL-----VYARRYDGDTQT 177 Query: 170 LQGIFIVD-SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 LQG+ + D ++D + + A+ +D+ I+++G ++ S + S+ +F + L Sbjct: 178 LQGVTMQDFNQDGKVSHVENAEYAEYSMDK--WIMHNGMLYDISEGQSEHSM-RFDTQVL 234 Query: 229 QTESANSSTIV--LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFG 286 ++ + + + L N + +E ++R+T + +IF Sbjct: 235 PIKANPKQIVREQKDPEELTMKELRAQ-INIMKTQYVDTNKLEAELYQRITVPMASLIFA 293 Query: 287 LISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF-LFC 345 LI + + R + I F ++ + + + ++ PI+ ++ Sbjct: 294 LIGVPLGLQP--TRNSSSAGFAMSVIIIFF--YYALMTMGNALARSGAVAPIIAVWIPNI 349 Query: 346 ISSIFLLMIKKKYTK 360 + I ++ ++ ++ Sbjct: 350 VGLIAGFILIRRASR 364 >gi|189500558|ref|YP_001960028.1| permease YjgP/YjgQ family protein [Chlorobium phaeobacteroides BS1] gi|189495999|gb|ACE04547.1| permease YjgP/YjgQ family protein [Chlorobium phaeobacteroides BS1] Length = 441 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 73/429 (17%), Positives = 141/429 (32%), Gaps = 73/429 (17%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YIL+ FL S + I+FI + + + + + ++ ++ + + Sbjct: 1 MKILYRYILKEHIGPFLFSFITILFILTLQFVTRFFDRFAGKDLGFIVIAELISLQVAWM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + T ++ ++E+ ++ G S L+ PVL A LL+ L NI Sbjct: 61 VVLALPMAVLVATLIAFGNLANSSEMTVMRAGGVSLYRLVFPVLVAAALLTGILERFNNI 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 + P+ K L A L EN F L D I + + + NTL+GI I + Sbjct: 121 VLPEANYQAKVLLRDITRAKPTFGLTENAFSGLVDGYSILVREEGSDPNTLEGITIYERG 180 Query: 180 DTQTHKIYYAQSGSIDLDRQA----IILNDGEVHR-KSPISKDISIMKFKSYTLQTES-- 232 + + A+SG I + L +G++H+ + ++ +M F+ + S Sbjct: 181 SNEDKAVITAESGHIAFTADYHYLILTLFNGQMHKMQGQGKEEYRVMTFEKHRFVFSSTG 240 Query: 233 -----ANSSTIVLKANDQNLSFLLN--------------------------------PNP 255 + I + + L Sbjct: 241 YGFERTEGNEIRRGDRELSAEQLFGMGMKFRKRMLDATVLIDKSIEREQKAINARSVQPE 300 Query: 256 NNPNYRPELLETYRSEFHKRLTQWL---------------------------FPVIFGLI 288 N ++E KR+ + L + + F I Sbjct: 301 NRGAESDRYAGINKAEAEKRVDKMLVAVDREIEHIEQSQGMYNKYMVEFHKKYALSFACI 360 Query: 289 SIVAADKRALVRQRKKIHPIFISLSIS-FGVFWGFSYIIHKIEQNPYYIPILYLFLFCIS 347 V V ++ I LS+ F ++W + K+ P + ++L Sbjct: 361 VFVLVGAPLGVLAKRGGFGIGAGLSLLFFILYWALLIMGEKLSDRGLLDPGISMWLANAV 420 Query: 348 SIFLLMIKK 356 + + I Sbjct: 421 MLLIGFIAM 429 >gi|262341091|ref|YP_003283946.1| putative YjgP/YjgQ family permease [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272428|gb|ACY40336.1| putative YjgP/YjgQ family permease [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 381 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 72/373 (19%), Positives = 149/373 (39%), Gaps = 21/373 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K +LY++R F + I + + +I+ ++ ++ I++K Y ++ Sbjct: 4 IKKLDLYMIRLFITPFFIIFSTIFAVFMIQFFWSQIDELTGKNINILIIIKFVFYFGISI 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+VTP + + ++ N EL+ I ++G S ++KP+L + +LSI L+ ++ Sbjct: 64 IPLVTPISLLLTSIITFGHLSENQELIAIKSSGISLFRVMKPILGITCILSIGLYFFSDL 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 PK K+L K L+E +F L D +IKI + N L IFI Sbjct: 124 AIPKAIKQAKKLGYKISSTHPSFKLKEGIFVNLLPDFFIKIDRK-KNQQLHNIFIFFYDK 182 Query: 181 TQTHKIYYAQSGSIDLDRQ-----AIILNDGEVHRKSPISK--DISIMKFKSYTLQTESA 233 +Q G ++ L +G ++ ++ + I++F + + Sbjct: 183 NLLVNTILSQKGFFIPNKDQSEFIQFKLINGILYSENTNKEQSSYQIVQFDTLIQNFQIP 242 Query: 234 ---------NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVI 284 + + + Q ++ L + L + E K+ T + +I Sbjct: 243 FYEEIKNLDDYESYNTQNLIQKINLLKKEKSKHQKENIHKLAKLQLELQKKFTFPVTCII 302 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-NPYYIPILYLFL 343 L A A++R+ +P I+L+I + + +K+E+ Y ++ Sbjct: 303 MFLTG---APLGAIIRKGGIGYPTMIALAIFIIYYTLLTITQNKVEKVEIYPWIGAWIPN 359 Query: 344 FCISSIFLLMIKK 356 F + + M K Sbjct: 360 FIFFPVSIWMTYK 372 >gi|323978945|gb|EGB74025.1| permease YjgP/YjgQ family protein [Escherichia coli TW10509] Length = 356 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 76/370 (20%), Positives = 140/370 (37%), Gaps = 32/370 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSVQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + +N L + I + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDVLIY-TS 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +I+ A+S + SP + + +Y L + + + + Sbjct: 180 TANRTRIFRARSVDVVD--------------PSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLE----------TYRSEFHKRLTQWLFPVIFGLIS 289 +NL LNP +PN + + +E R ++ L + Sbjct: 226 Y----RNLQLHLNPLDQSPNVKRKAKSVTELARSAFPADHAELQWRQSRGLT--ALLMAL 279 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 + + R RQ + + ++L + G IP L+L + Sbjct: 280 LAISLSRVKPRQGRFSTLLPLTLLFVAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMG 339 Query: 350 FLLMIKKKYT 359 L+++ + ++ Sbjct: 340 LLMLVARDFS 349 >gi|46580072|ref|YP_010880.1| permease [Desulfovibrio vulgaris str. Hildenborough] gi|120602470|ref|YP_966870.1| permease YjgP/YjgQ family protein [Desulfovibrio vulgaris DP4] gi|46449488|gb|AAS96139.1| permease, putative [Desulfovibrio vulgaris str. Hildenborough] gi|120562699|gb|ABM28443.1| permease YjgP/YjgQ family protein [Desulfovibrio vulgaris DP4] gi|311233929|gb|ADP86783.1| permease YjgP/YjgQ family protein [Desulfovibrio vulgaris RCH1] Length = 380 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 51/363 (14%), Positives = 119/363 (32%), Gaps = 17/363 (4%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 + + + FL+ ++ + + + LQ L L + YL+P + +V P Sbjct: 1 MFKELVSIFLLCLGALLSLILIGRGLQLRELFLGLDLGLTDATLLFLYLVPFFMLLVVPV 60 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 + M+ + EL+ + G S ++ L +L + Sbjct: 61 ACMLSVFLTFLRMSTDRELVALKAGGVSIYQMMAAPLVFCVLCAGLSLSISLHWLSWGMG 120 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDTQTHKI 186 + + ++ +F + L + + +P L+ + + D + Sbjct: 121 NFRATIMEIANTRARIVIQPGVFNQDIPGLTLFARQVDPATGNLRQVIVEDRSRPGSTLT 180 Query: 187 YYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSY----TLQTESANSSTI 238 A G+ D L DG +++ +++S++ F Y L Sbjct: 181 IVAPEGTTATDEVRGEILFHLRDGRIYK--ADGENVSVLGFSEYSVRLDLDKLFKGLELG 238 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETY----RSEFHKRLTQWLFPVIFGLISIVAAD 294 +K + + L + N Y E+ E Y E HKR ++ G+ ++ A Sbjct: 239 EIKPKEMSWRQLAGLDLN--RYEAEMGERYVRKVLVEVHKRWALPAACIVLGIFALPLAC 296 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 +R++ + + + + + P LF ++ ++ L + Sbjct: 297 AFEGLRRQLGVALALVMFLVYYSMLSLGLSTGEAGTVPPVVGLWAPNVLFLVAGLYGLRL 356 Query: 355 KKK 357 + Sbjct: 357 TAR 359 >gi|119471263|ref|ZP_01613766.1| hypothetical protein ATW7_11365 [Alteromonadales bacterium TW-7] gi|119445729|gb|EAW27012.1| hypothetical protein ATW7_11365 [Alteromonadales bacterium TW-7] Length = 370 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 56/365 (15%), Positives = 136/365 (37%), Gaps = 23/365 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + +S + L ++ I +++ + S + ++L + +P + Sbjct: 2 LIFRYLTAEVLKSQVAVFLTLMTIFLSQKLVVILGDASEGSIPAQLVLSMIALKLPQLAS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + + ++E+ ++ G S +++ L + L++ + Sbjct: 62 LILPLSIFLGIILAYSRIYADSEMTVLKACGVSEWYVVRVTLISSAGLALLAGALTMYLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIKISKYNPNN-TLQGIFIVDSRD 180 P QL +A+ S L F + + I L +F+ + Sbjct: 122 PWASEQEYQLKEQAKADAGLSALRAGRFQETGNEKAVVFIHNIENGGKELNKVFVAQLPN 181 Query: 181 TQTH---KIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + ++ YA+ G + Q ++L DG+ + + +++ +F Y++Q Sbjct: 182 SDNDELARLVYAEQGVVIEAQNGEQQLVLTDGKRYETDATTPALNLTEFDGYSVQIREQE 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 K + LL N PE + ++ R+ L L++++A Sbjct: 242 IEHQRRKLEAVPTNQLLAIN------TPESIAQWQ----WRIAIPL---SIPLLTLLAVP 288 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIE--QNPYYIPILYLFLFCISSIFLL 352 + ++ K + ++S+ G F + IE + P I + ++ L + LL Sbjct: 289 LSVVNPRQGKFAKLVPAISLYLGYFILLNAAKFAIEDGKIPPSIGLWWIHLSALFIGGLL 348 Query: 353 MIKKK 357 +IK + Sbjct: 349 IIKGR 353 >gi|254507443|ref|ZP_05119578.1| putative permease, YjgP/YjgQ family [Vibrio parahaemolyticus 16] gi|219549699|gb|EED26689.1| putative permease, YjgP/YjgQ family [Vibrio parahaemolyticus 16] Length = 366 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 54/356 (15%), Positives = 127/356 (35%), Gaps = 21/356 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ + ++ + + ++L I G IP + Sbjct: 2 IIVRYLIRETLKSQLAIFFVLLLVFVSQTFIKVLGDATDGDIPARLILAIVGLNIPQMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ + LA + ++ + + Sbjct: 62 LMLPMSLYIGILLTFGRLYSESEITVMNATGMGSKFLIRAAMSLAFITTVLAAFNTLYLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNTLQGIFIVD--SR 179 P + QL + + L+ F R D + I + +N L +F+ R Sbjct: 122 PWSQEKEAQLIEQVAAENSVDLLKAGQFQRTPDGSSVVFIDEIR-DNKLNNVFVAQVRPR 180 Query: 180 DTQTHKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 D + ++ SG + D RQ I+++DG + P D + +F+ Y+ Sbjct: 181 DAILPSVMFSNSGEVREHDDGRQMIVMHDGTRYEGIPTRLDYMVTEFEHYSGLIGQREVQ 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 L+ + ++E R++ + L++++ Sbjct: 241 AKRRSWGAVPTLDLIESTDLSA----------KAELQWRISL-FVCI--PLLTMLVVPLS 287 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-NPYYIPILYLFLFCISSIFL 351 A+ ++ + + ++ F F S IE N + ++ F + + Sbjct: 288 AVNPRQGRFAKMGPAILAYFVYFISMSTTKSAIEDGNIPAVIGMWPINFALLVAAI 343 >gi|84387840|ref|ZP_00990855.1| putative permease [Vibrio splendidus 12B01] gi|84377355|gb|EAP94223.1| putative permease [Vibrio splendidus 12B01] Length = 366 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 57/357 (15%), Positives = 126/357 (35%), Gaps = 25/357 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + + + S +++L I G +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFISVLADASDGDIPASLILSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+++++ TG LI+ L+LA++ + + + Sbjct: 62 LMLPLSIYIGILLTFGRLYAESEIVVMNATGIGNKFLIQSALYLALITASVAAFNSFWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNTLQGIFIVDS--R 179 P + ++Q+ + + L + F D + I + N L+ +F+ R Sbjct: 122 PWSQDKVEQMYEEVAAENSVDLLPKGKFEGTPDGSSVVFIDDID-GNKLENVFVAQMRPR 180 Query: 180 DTQTHKIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 D+ + +++SG + RQ I++ DG H P D + F+ Y Sbjct: 181 DSVLPSVMFSKSGDVKELSDGRQVIVMYDGTRHEGVPTRLDYMVTHFEEYEGLIGQREVE 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 L+ + ++E R++ L L++++ Sbjct: 241 KKGRDWEAIPTLELI----------GNPENSAKAELQWRISLVLC---IPLLTMLVVPLS 287 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-----PYYIPILYLFLFCISS 348 A+ ++ + I ++ I F S IE+ PI L LF Sbjct: 288 AVNPRQGRFAKIGPAILIYLTYFLAISATKSSIEEGSIPAVVGMWPINALLLFVAIG 344 >gi|294670275|ref|ZP_06735168.1| permease, YjgP/YjgQ family [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308012|gb|EFE49255.1| permease, YjgP/YjgQ family [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 370 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 49/359 (13%), Positives = 137/359 (38%), Gaps = 19/359 (5%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 ++ + + + + I+ + Q + + + +++ + + G+ + P++ Sbjct: 7 FVKELTFTAIGIFVVILAVLVSTQAINLLGRAADGRVAVDAVAALIGFWTLGMTPLLLVL 66 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 + T VLT R++E+ + + G S ++PVL A+ + + + + P Sbjct: 67 TAYISTLTVLTRFWRDSEMSVWLSCGLSLRQWVRPVLSFALPFAALVAAMQLSVLPWAEL 126 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLD--DDLYIKISKYNPN-NTLQGIFIVDSRDTQTH 184 ++ + + S +E F L + + ++ ++ +F+ + D Sbjct: 127 RSREFAEILKQKQELSMVEAGEFRTLGKKNGRVYFVGTFDTGSGIMKNLFLREQDDKGRE 186 Query: 185 KIYYAQSGS--IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 I +A+ G + +++ + L G + P D + + F+ L + + Sbjct: 187 NIIFAKEGRFSLTDNKRTLELTQGYRYGGIPGEADYNQVSFEHLNLIISATPKIINPIDH 246 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + + +NP +R+E RL+ L +I +SI+A + Sbjct: 247 R-RTIPTAKLIGSDNP--------QHRAELMWRLSLPLAALI---LSILAVPLSYFNPRT 294 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQN--PYYIPILYLFLFCISSIFLLMIKKKYT 359 + I ++ G +++ + IE + ++ L + + +++ +L+ + Sbjct: 295 GHTYNILFAIGFFLIYQNGLTFLRNAIENSKLGFWTGFLPIHIIMLAAAVILLRVRSMP 353 >gi|154248856|ref|YP_001409681.1| permease YjgP/YjgQ family protein [Fervidobacterium nodosum Rt17-B1] gi|154152792|gb|ABS60024.1| permease YjgP/YjgQ family protein [Fervidobacterium nodosum Rt17-B1] Length = 1111 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 59/354 (16%), Positives = 123/354 (34%), Gaps = 6/354 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ Y+L+ + F M + V + Q + + + ++ LL Y IP Sbjct: 1 MKTLTRYVLKQALKPFFMGLAGFIVFVSVEWLYQISDYIIRNRVGIDKLLLFVMYNIPYF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P V++ M N E+ + G S L+ P + LA++L F ++ + Sbjct: 61 TFLGIPVGVLFSIFWVISDMYNNREITALLVHGVSAKHLVTPFIILALILGFFSWLLGDY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 + P Q+ + S ++ N+ L+ D+Y + ++N L + + Sbjct: 121 VVPTANYKSSQILNQYIFQSPESVVKTNMLVELEKDVYFYVKEHNKAKGELYDVVLF-RN 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISI-MKFKSYTLQTESANSST- 237 + +I A+ + + L DG ++ + + + M+FK L Sbjct: 180 EEGNEQILTAKK--VIKRKDGWFLLDGSMYIVELKTGFLKLDMQFKEMKLDVAGEIEEML 237 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 K S L E ++R L ++ LI + + Sbjct: 238 RAYKTTRDKTSKELREQLQTYKKLGINASNLIVELNQRYANALGALVIVLIGLPVSLLFG 297 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + + I F+ + + G S + + +P L +F + + Sbjct: 298 FISRSWSIILTFLIIVLYQGSGAWLSGMGKEGLMDPMLATWLPNIVFSVVGFIM 351 >gi|85713126|ref|ZP_01044159.1| Predicted permease [Idiomarina baltica OS145] gi|85693042|gb|EAQ31007.1| Predicted permease [Idiomarina baltica OS145] Length = 371 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 54/367 (14%), Positives = 135/367 (36%), Gaps = 27/367 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ F Y++ +S + + ++ I + ++ ++ S +I+ ++ +P + Sbjct: 1 MRIF-KYLIAETLKSQIAVLVVLMTIFVSQKFVRVLSDASEGDIPSSIIFQLLSLNLPAL 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + + + E+ ++ G S + + L +A++L++ Sbjct: 60 LALIIPLSLFLGILLAHGRIYADNEMTVLHACGVSEWYVTRVTLVVAVILALLTAALTMY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNNTLQGIFIVDSR 179 + P +++ KA+ + L F + + I I + LQ +F+ + Sbjct: 120 VVPWSLEQEQKIEDKARADSGLTALIPGRFQQSSNGKAVIFIQSQDDQGDLQNVFVAQHQ 179 Query: 180 DTQTH----KIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 Q + + SG ++ + + L DG+ R + + +M F+ Y LQ + Sbjct: 180 AEQGRIRSGSVVVSTSGEVNTESSGSQWLELRDGK--RFAGDGEHYQLMSFEQYRLQIKE 237 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + ++ L E +E R+ L L++++A Sbjct: 238 QPVDEQLRDLEAYTVNELWQ----------EQSNAAAAELQWRIAIPL---AMPLLTLIA 284 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN--PYYIPILYLFL-FCISSI 349 + ++ K + ++ I G F + P +I + ++ + + I Sbjct: 285 VPLSRVNPRQGKFARMAPAILIYLGYFLVLMAAKSAVRDGVIPTFIGLWWIHVALLVFGI 344 Query: 350 FLLMIKK 356 LL + Sbjct: 345 ALLSRAR 351 >gi|312897532|ref|ZP_07756952.1| conserved hypothetical protein [Megasphaera micronuciformis F0359] gi|310621384|gb|EFQ04924.1| conserved hypothetical protein [Megasphaera micronuciformis F0359] Length = 364 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 54/367 (14%), Positives = 130/367 (35%), Gaps = 13/367 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRI-NLVSSSTESLNILLKISGYLIPT 59 M+ + YIL+ FL + L RI NL++ S+ +I +P+ Sbjct: 1 MRILDKYILKEFIGPFLFGVCAFTSVFVGTGTLYRIANLINQYGASMWAAFRILVLALPS 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ + P + + M+ +E++++ + G + L P+ A+ +S+ Sbjct: 61 IIVITFPMSVLLGSLMAFGRMSAASEIIVMRSGGQNFPRLAMPIFITALCISLGTTAFNE 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI----KISKYN-PNNTLQGIF 174 + PK + ++ + A ++++ + I +Y+ L+ + Sbjct: 121 FVVPKANNAYNRIINEEVKAGAQPTTQDHIILKNVKGSDISSLMYARQYDGQEKRLKDLT 180 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKS--PISKDISIMKFKSYTLQTES 232 + + + ++ A D D+ I++ G ++ S + M F TL Sbjct: 181 VQEFDNDVLTRVEKADYAEWDGDK--WIMHKGIIYDLSGGDEQQVTRTMTFNHQTLPISQ 238 Query: 233 ANS--STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 + + K ++ + L N + + E R + L ++ L+ Sbjct: 239 KPNKMAESQKKPDELTIRELKEQIKVLDNNSVDT-NKMKVELFNRFSMPLASLVCALVGA 297 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 ++ I + I + + + + + PY L + I+ I+ Sbjct: 298 PLGLQKQRGSSSIGFGISVIVIFIYYSIMTISNALGNGGRIPPYVAAFLPDVITGIAGIW 357 Query: 351 LLMIKKK 357 L+ K + Sbjct: 358 LIYKKSR 364 >gi|258593793|emb|CBE70134.1| putative Permease YjgP/YjgQ family protein precursor [NC10 bacterium 'Dutch sediment'] Length = 356 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 44/366 (12%), Positives = 125/366 (34%), Gaps = 19/366 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+ R I + ++ C ++ + ++ +N V+ +L + Sbjct: 3 MLLLDRYLTREIAKPLVIFCGGLLLLFANFTAVRYLNRVADGIMPFQSVLPLVLVRAAVA 62 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + L + ++E+ + ++G S +++ V +++++ + Sbjct: 63 LELLLPIALHLSVVVTLGRLYTDSEMTALFSSGVSPSRIMRIVCVGSLIVAGIVAFLSIY 122 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKY-NPNNTLQGIFIVDSR 179 + P +L +A + + ++ F+ + + + ++ +FI SR Sbjct: 123 VRPWANENRYRLEREAAADVDLNDMQPGHFYENSSGTVLFFQRRAQSSGRMREVFIQ-SR 181 Query: 180 DTQTHKIYYAQSGSI-----DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 ++ +A + ++ + +++ S + L+ E A Sbjct: 182 SEDRIRLIWADEAHYPEAVEAGAGRTLVCSGAQIYELSRDRGAVRQATSDELVLEWEKAR 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + + K L +EF RL+ + ++ GL+ Sbjct: 242 TLSEEYKRKAAPTWQL----------ARSASPKDIAEFQWRLSTPVAALLMGLLGFP--L 289 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RA RQ K +S + + +P ++ ++ + ++ Sbjct: 290 SRARARQGKYAKLFVSVVSYATFYNLNMMARHWVEKGVVSTVPGIWWVHLLLAILVASLL 349 Query: 355 KKKYTK 360 ++ T+ Sbjct: 350 WRRTTQ 355 >gi|166367866|ref|YP_001660139.1| hypothetical protein MAE_51250 [Microcystis aeruginosa NIES-843] gi|166090239|dbj|BAG04947.1| hypothetical protein MAE_51250 [Microcystis aeruginosa NIES-843] Length = 389 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 49/367 (13%), Positives = 131/367 (35%), Gaps = 23/367 (6%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + YI + FL + + + + ++ S + LKI +P Sbjct: 17 SILDRYIFVELLLPFLFGMGLFTSLGVAIGTLFDLVRRITESGLPFTLALKILLLKMPEF 76 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + + + ++EL+ + + G S LI P + L+++++ ++ + Sbjct: 77 IVLAFPMSILLAALMAYSRLASDSELIALKSIGISVYRLIIPAIVLSLIVTGLTYVFNDY 136 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF-------FRLDDD------LYIKISKYNPN 167 + P KA S++E+N+ + D + ++ Sbjct: 137 VAPAASYEANATMTKALRPNRKSFIEDNIIYPEYGKVRQPDGGEPQTVLRRLFYAERFNG 196 Query: 168 NTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 + G+ I+D + ++I ++S S ++++ +G ++ P +I++F+ Sbjct: 197 QEMLGLTILDRTQPEVNQIITSESASWNIEKNIWDFYNGTIYLIDPKGSYRNIVRFQHQQ 256 Query: 228 LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYR----PELLETYRSEFHKRLTQWLFPV 283 L + +A D + L + P + + + ++++ + Sbjct: 257 LALPRTPL-DLAFRARDGSEMTLRQAREYLEILQLSGNPTKIRKLQVQIEQKISLPFVCL 315 Query: 284 IFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 +FG+I + Q F + ++ S++ + P++ +L Sbjct: 316 VFGMIGAALGLRP----QNSNKATSFGICIVLIFSYYLLSFVTSSLGIGGVLTPLMAAWL 371 Query: 344 FCISSIF 350 I + Sbjct: 372 PNILGLT 378 >gi|86147550|ref|ZP_01065860.1| putative permease [Vibrio sp. MED222] gi|85834589|gb|EAQ52737.1| putative permease [Vibrio sp. MED222] Length = 366 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 57/356 (16%), Positives = 126/356 (35%), Gaps = 23/356 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + + + S +++L I G +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFISVLADASDGDIPASLVLSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+++++ TG LI+ L+LA++ + + + Sbjct: 62 LMLPLSIYIGILLTFGRLYAESEIVVMNATGIGNKFLIQSALYLALITATVAAFNSFWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RD 180 P + ++Q+ + + L + F R D + + N L +F+ RD Sbjct: 122 PWSQDKVEQMYEEVAAENSVDLLPKGKFARTPDGSSVVFIEGIDGNQLDNVFVSQMRPRD 181 Query: 181 TQTHKIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + +++SG + RQ I++ DG H P D + F+ Y Sbjct: 182 SVLPSVMFSKSGDVKELSDGRQVIVMYDGTRHEGVPSRLDYRVTHFEEYE---GLIGQRE 238 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + K + + ++E R++ L L++++ A Sbjct: 239 VEKKGRE-------WEAIPTIDLIGNQDNRAKAELQWRMSLVLC---IPLLTMLVVPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-----NPYYIPILYLFLFCISS 348 + ++ + I ++ I F S IE+ PI L LF Sbjct: 289 VNPRQGRFAKIGPAILIYLTYFLAISATKSSIEEGDIPAAIGMWPINALLLFVAIG 344 >gi|218710648|ref|YP_002418269.1| hypothetical protein VS_2728 [Vibrio splendidus LGP32] gi|218323667|emb|CAV19979.1| hypothetical permease [Vibrio splendidus LGP32] Length = 368 Score = 153 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 57/356 (16%), Positives = 126/356 (35%), Gaps = 23/356 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + + + S +++L I G +P + Sbjct: 4 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFISVLADASDGDIPASLVLSIVGLNMPAMGL 63 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+++++ TG LI+ L+LA++ + + + Sbjct: 64 LMLPLSIYIGILLTFGRLYAESEIVVMNATGIGNKFLIQSALYLALITATVAAFNSFWLS 123 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RD 180 P + ++Q+ + + L + F R D + + N L +F+ RD Sbjct: 124 PWSQDKVEQMYEEVAAENSVDLLPKGKFARTPDGSSVVFIEGIDGNQLDNVFVSQMRPRD 183 Query: 181 TQTHKIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + +++SG + RQ I++ DG H P D + F+ Y Sbjct: 184 SVLPSVMFSKSGDVKELSDGRQVIVMYDGTRHEGVPSRLDYRVTHFEEYE---GLIGQRE 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + K + + ++E R++ L L++++ A Sbjct: 241 VEKKGRE-------WEAIPTIDLIGNQDNRAKAELQWRMSLVLC---IPLLTMLVVPLSA 290 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-----NPYYIPILYLFLFCISS 348 + ++ + I ++ I F S IE+ PI L LF Sbjct: 291 VNPRQGRFAKIGPAILIYLTYFLAISATKSSIEEGDIPAAIGMWPINALLLFVAIG 346 >gi|86607080|ref|YP_475843.1| YjgP/YjgQ family protein [Synechococcus sp. JA-3-3Ab] gi|86555622|gb|ABD00580.1| putative membrane protein, YjgP/YjgQ family [Synechococcus sp. JA-3-3Ab] Length = 392 Score = 153 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 62/363 (17%), Positives = 127/363 (34%), Gaps = 16/363 (4%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 E Y+ + + R F + + Q+ +L+ +L I +P +L + Sbjct: 31 LEFYLCKEMIRPFFLGVAGGTVMMLGNQLFIYADLLVKKGAPPLTILHILLLNLPAILVV 90 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P T L M ++E+ + G ++ PVL + +L+S ++ +I P Sbjct: 91 TFPIAGLFATLLTLGRMGADSEITALRAAGIPYRKVLIPVLCIGLLVSGLALLTNEVIVP 150 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSRDTQ 182 + +K L+ LA + R+DDDL+ + +P ++ + I+D + Sbjct: 151 ETNQKVKTLNTNLILAQDALPFDSEEIVRVDDDLWFHVGSIDPKTGWMRDLLILDRKAET 210 Query: 183 T----HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 ++ AQ+ QA L D + R + + L + + Sbjct: 211 GHLRYPQVISAQTAHQV--GQAWHLQDVVIRRYDERGRTYYEGQVAEMELNIVNKLVGLV 268 Query: 239 VLK--ANDQNLSFLLNPNPNNPNYRPELLETYR--SEFHKRLTQWLFPVIFGLISIVAAD 294 + +Q + L + + R +E+H + L F I + A Sbjct: 269 YAEKVPQEQRAAELWEQCQRYRAEQRPSADVARCLTEYHLKFAIPLA--SFFAILVAAPL 326 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFS---YIIHKIEQNPYYIPILYLFLFCISSIFL 351 VRQ + + +++ + F + S + +P+ L +F L Sbjct: 327 GLQTVRQTGRYGSVALAIVLVFIYYVLMSLGRAMGRVEHIDPWLAAWLPNMIFGGVGFSL 386 Query: 352 LMI 354 L Sbjct: 387 LWR 389 >gi|312142844|ref|YP_003994290.1| permease YjgP/YjgQ family protein [Halanaerobium sp. 'sapolanicus'] gi|311903495|gb|ADQ13936.1| permease YjgP/YjgQ family protein [Halanaerobium sp. 'sapolanicus'] Length = 1063 Score = 153 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 63/348 (18%), Positives = 134/348 (38%), Gaps = 16/348 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YIL+ + FL+ I I +L+ +++ ++ Y +P V+ Sbjct: 4 KLMDKYILKEVSYPFLLGVFIITIILVGSYFFHLADLIIVKNVPFSLVFRLLLYRLPGVM 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P T + +NR E+ + G S L+ P+ L +L+S F F+ I Sbjct: 64 VETFPIAVLFATMTAINRLNRENEITALRMGGVSIFRLVLPLFILGLLISSFTFLLNENI 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVD-SR 179 P + + + L E +FF+ +S YN + L+ I I + Sbjct: 124 VPWTNHQAQNIIRQTILKDAMPDPESEVFFQGPRGRLFYVSSYNQSSGELKNIVIYQLAS 183 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + ++ A G ++ + A +LN G +H+ + + I KF ++ + Sbjct: 184 EAEFPEVITAVDGLVEDN--AWLLNTGIIHQYNQGGEIILESKFNQMEIELTDQMREVMG 241 Query: 240 LKAN--DQNLSFLLNPNPNNPNYRPELLE--TYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + + + + L +R + + ++H +L + L ++F I+ + Sbjct: 242 TQKSTAEMSRGEL---GRRIELFRRSGIGVNSLLVDYHLKLAEPLAALLF----ILISLP 294 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 +L + +++ I F + S+ +N P+L +L Sbjct: 295 LSLSSKESSTWNFILTIIIVFLYYVVLSFS-RSFGRNEVLSPLLAAWL 341 >gi|330827962|ref|YP_004390914.1| putative permease [Aeromonas veronii B565] gi|328803098|gb|AEB48297.1| Predicted permease [Aeromonas veronii B565] Length = 362 Score = 153 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 56/354 (15%), Positives = 117/354 (33%), Gaps = 18/354 (5%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 + R ++ L ++ I Q ++ I + ++ + +P + ++ P Sbjct: 1 MFRETLKTQLAVLFVLLLIFVSQQFIKIIGDAADGEVPTRLVSTLLLLNLPNMALLMLPI 60 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 + + +E+ ++ G S +++ + LA+L ++ + I P+ + Sbjct: 61 SLFLAILFAHGRLYAESEMTVMHAVGFSHRFVMRSAMLLALLTAVVAAFNTGWIAPQAKE 120 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNT-LQGIFIVDSRDTQT-H 184 Q+ + + S+L+ F LD L I N N + LQ IF++ + Sbjct: 121 REYQVIDEFKADPGISFLQAGRFMDLDKGRLVAYIQDLNDNGSKLQKIFVLQRAEGNNPP 180 Query: 185 KIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + A G + +D + L DG + + K I F+ Y L K Sbjct: 181 SVVVATEGVVTVDENGLQWLTLMDGSRYEGNFSGKQFQISDFREYGLVIRQQEMERSNRK 240 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 A + L N +E R++ L + L+ + A R RQ Sbjct: 241 AAAKPTMELFGTQDN----------AMMAELQWRISLPLSIPVLTLLVVPLA--RVNPRQ 288 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + + + Y P ++L L + Sbjct: 289 GRYAKLLPAIMLYLSYFLLLSAARSAIDSGRLPYWPGMFLVPLGYLLFIGLPLN 342 >gi|290473524|ref|YP_003466394.1| putative transmembrane protein, transport [Xenorhabdus bovienii SS-2004] gi|289172827|emb|CBJ79598.1| putative transmembrane protein, transport [Xenorhabdus bovienii SS-2004] Length = 366 Score = 153 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 57/365 (15%), Positives = 135/365 (36%), Gaps = 27/365 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFSQKLVEVLGAAVEGSVPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + + +E+ ++ G + L+K L LA+ S+ + Sbjct: 62 LILPLSLFLGVLMTFSKLYTESEITVMHACGLGKGVLVKSALILALFTSMLAAANVLWFT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNTLQGIFIVDSR-- 179 P +Q+ A A+ + + + E F D + + I N + +F+ R Sbjct: 122 PWSSKYQEQVLADAKANPSLAAIMEGQFKPSRDGNMVLYIGDV-KGNNFENVFLAQLRPV 180 Query: 180 DTQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + Q + A G ++ Q +L+ G + + + +D I FK+Y + Sbjct: 181 NNQRPSVVIADGGHMEERPNGNQVAVLHQGVRYEGTALMRDFRITDFKNYQAVIGHKAAD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 K + S L + + R+E H RLT + ++ L+ + Sbjct: 241 IDSDKVEQKTFSQLWHKGDEDS----------RAELHWRLTLIVSVLVMALLVVP--LSA 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFLFCISSIFLLM 353 RQ + +S+ + ++ F + + N P +++L + L + Sbjct: 289 VNPRQGR-----VLSMLPAMLLYLIFFLLQSSLRSNGGRGKLDPAFWMWLVNGAYFALAL 343 Query: 354 IKKKY 358 + Sbjct: 344 ALNMW 348 >gi|121997477|ref|YP_001002264.1| permease [Halorhodospira halophila SL1] gi|121588882|gb|ABM61462.1| permease YjgP/YjgQ family protein [Halorhodospira halophila SL1] Length = 372 Score = 153 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 51/361 (14%), Positives = 126/361 (34%), Gaps = 18/361 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + Y++R + L + + Q++ + + + + G I Sbjct: 8 LSIIDRYLVREAAGAALAVLAVLFAVLSANQLIDYLADAAGGDLPGEAVAALMGLQILRY 67 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L +V P + L + R++EL ++ G ++ +L LA+ +++ + + Sbjct: 68 LGVVIPAALFLGIVLALGRLYRDSELPVLAACGVGPARQMRGLLLLALPVAVGVGALSTV 127 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P T + +A L+ F D + S+ + + L+ +F +RD Sbjct: 128 AAPWASHTADVYAEQAARTADLGALQAGRFIGGGDAGTVYASRTDGDGVLREVFAH-ARD 186 Query: 181 TQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + A G +D + + DG + P D + F + L ++ Sbjct: 187 GELETVIRADRGRQLIDPETGQRFFVFEDGHRYDGHPGQLDWRVTDFDRHGLLIDTREPR 246 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK- 295 + + L R+E RL+ + V+ L+++ A Sbjct: 247 EVSRDREGTPTAELW----------AAGGLQDRAEIEWRLSMPVMVVVLSLLAVPLAKAE 296 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 R K + + + ++ + G ++ + P + + ++ L ++ L + Sbjct: 297 PRDGRYGKLLSAVLVFVAYFQLLSSGREWL--EAGIVPAPLGLWWVHLLAGVAVVLWTRR 354 Query: 356 K 356 + Sbjct: 355 R 355 >gi|145219916|ref|YP_001130625.1| permease YjgP/YjgQ family protein [Prosthecochloris vibrioformis DSM 265] gi|145206080|gb|ABP37123.1| permease YjgP/YjgQ family protein [Chlorobium phaeovibrioides DSM 265] Length = 441 Score = 153 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 49/258 (18%), Positives = 93/258 (36%), Gaps = 8/258 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL+ F + L I+F+ + + L+++ + Sbjct: 1 MKLIDRYILKAHVGPFFFAFLTIIFVLILQFFASFADRFIGRGIGFGALVELIALQSAWM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + ++ +E+ + +G S L+ P+L ++LS F+ N+ Sbjct: 61 VGLAAPMAVLIAVVMAFGALTTTSEMTVFRASGVSLYRLMIPILLAGLVLSFFVERFNNV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSR 179 ++P + L A + EN F L D I + K + + I I DS Sbjct: 121 VQPLANYQARSLMDDIVKAKPNFGITENAFSPLVDGYSILVRKSDERTGGIGDIIIYDST 180 Query: 180 DTQTHKIYYAQSGSIDLDRQA----IILNDGEVHR-KSPISKDISIMKFK--SYTLQTES 232 + A+ G I + L +GE+H + P + M F+ Y ++ Sbjct: 181 RPDFRSVITAEEGRISFSDDGGYLLLTLRNGEIHEVQQPDYRLYRKMSFQQHRYVFESTG 240 Query: 233 ANSSTIVLKANDQNLSFL 250 S + N L Sbjct: 241 FGFSRSDDRRNRAGGKEL 258 >gi|221133510|ref|ZP_03559815.1| permease YjgP/YjgQ [Glaciecola sp. HTCC2999] Length = 389 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 52/366 (14%), Positives = 138/366 (37%), Gaps = 22/366 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+L+ +S ++ I ++ ++ + + ++++ P + Sbjct: 2 IIFRYLLKETFKSQFAIFFILMAIFITLRFVRVLGDATDGEIPASLVMGFLALYSPVLAS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + ++E+ ++ G S + + +L LA++L + + Sbjct: 62 LILPISFFLGIMMAHGRFYVDSEMTVLQACGVSEWYVTRVMLLLAVILGLLTASITMYVA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKY-NPNNTLQGIFIVD--S 178 P + QL KA + + F + +D I + + + NN L IF+ + Sbjct: 122 PLAVESEYQLREKAGSEAGIAAIIPGRFQQTGNDAAVIFVHEVESANNQLTKIFLSQINA 181 Query: 179 RDTQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + ++ Y+Q+G+I+ Q +IL +G+ + S ++ + F Y +Q Sbjct: 182 DQPKKVRVIYSQTGTIEVQSDGTQQLILRNGQQYDGSIGQQNYQRVNFDEYRIQIGEQKV 241 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 ++ K L+ + + +E R+ L + ++A Sbjct: 242 ESMRRKVAALPTLELI----------GDNSDEAIAELQWRIAIPL---ALPFLVLIAVPL 288 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIE--QNPYYIPILYLFLFCISSIFLLM 353 + ++ + +F ++ + G F +E + P + + ++ + +L+ Sbjct: 289 SKVNPRQGRFGKLFPAILMYLGYFLLLMAARRALEDGKIPAGLGLWWVHGIILFIGTVLL 348 Query: 354 IKKKYT 359 +++ T Sbjct: 349 SRQRKT 354 >gi|134296646|ref|YP_001120381.1| permease YjgP/YjgQ family protein [Burkholderia vietnamiensis G4] gi|134139803|gb|ABO55546.1| permease YjgP/YjgQ family protein [Burkholderia vietnamiensis G4] Length = 363 Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats. Identities = 61/364 (16%), Positives = 137/364 (37%), Gaps = 21/364 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ I +++ + +S +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTIMLTTMMIRIVGYAASGEIDPRDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT R++E+++ +G S LIKP+ A + + + + Sbjct: 62 VMLVVTLFVSILFVLTRWYRDSEMVVWLASGVSLTRLIKPIGVFATPIILLIAFFAFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNT-LQGIFIVDSRD 180 P K + A+ Q S L F + I K +P+ + +Q +F+ + + Sbjct: 122 PWSNQQSKMIKARFQQRDEISLLAPGQFRESASNHRVFFIEKMSPDQSKVQNVFVTSTEN 181 Query: 181 TQTHKIYY-AQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + + A + ++L DG + +P + IM+F+ Y ++ S + + Sbjct: 182 GKVNVVVSHAGHTETRDGDRFVVLEDGRRYDGTPGQPNFKIMEFQRYGVKITSTPVTNVP 241 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + L NP NN +EF R L + ++ I Sbjct: 242 TTNSTPTPELLSNPTRNNL-----------AEFAWRAGLPLIAINLMVLGIP--LSYQNP 288 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI----LYLFLFCISSIFLLMIK 355 R+ + I+ + +++ I + + +IEQ + L+L + I ++ + Sbjct: 289 RRSRTIN-LVMAVLIYLTYSNLLNVVQAQIEQGKMSFGVGLVGLHLAVAAIVAVIFWLRV 347 Query: 356 KKYT 359 + Sbjct: 348 RNRP 351 >gi|299530038|ref|ZP_07043465.1| permease YjgP/YjgQ [Comamonas testosteroni S44] gi|298722018|gb|EFI62948.1| permease YjgP/YjgQ [Comamonas testosteroni S44] Length = 369 Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 62/367 (16%), Positives = 140/367 (38%), Gaps = 25/367 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ I + + RSF + + ++ + + +++ + + S + ++ + G+ + LP Sbjct: 2 LFDSSIRKELARSFGATAVVLITVVMTMMLIRTLGQAYKGSVSPSDVMLVMGFTVLGQLP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + + L+ M R++E++I G +L+KP+L A + + + + Sbjct: 62 TILGLSLFVAIVGSLSRMYRDSEMVIWFAAGQGLASLLKPLLRFAWPVILITAVLALGVL 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNT-LQGIFIVDSRD 180 P I+Q+ + Q + F + K +P++ +F+V SRD Sbjct: 122 PWSYQQIEQIKTQFQQRSDLDRIAPGEFQESAGGTRVFFVDKDSPSDMAASNVFVV-SRD 180 Query: 181 TQTHKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + A+ + ++ +IL DG+ + I +FK Y +Q ++ N TI Sbjct: 181 PGKESVTSAKGAHLAVIKGQRMVILEDGQRMETRSDDGSVRITEFKEYGVQVDNDNPVTI 240 Query: 239 -VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + A L+ + RS RL + F ++ + + Sbjct: 241 EEMAARSMPTKDLIGKDEP----------IARSVLAWRLGLPFAALNFVILGLAI---SS 287 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHK--IEQNPYYIPILYLF---LFCISSIFLL 352 + + + I+L +F V++ + IL L + +S + LL Sbjct: 288 VNPRAGNSSSLMIAL-FAFIVYYNLMTLGESWVSANKIGMWGILGLLHGSILIVSVLVLL 346 Query: 353 MIKKKYT 359 +++ Sbjct: 347 ARHFRWS 353 >gi|215488306|ref|YP_002330737.1| predicted permease [Escherichia coli O127:H6 str. E2348/69] gi|215266378|emb|CAS10815.1| predicted permease [Escherichia coli O127:H6 str. E2348/69] Length = 356 Score = 153 bits (386), Expect = 5e-35, Method: Composition-based stats. Identities = 76/370 (20%), Positives = 138/370 (37%), Gaps = 32/370 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + +N L I + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKQFNTNDNGRMILSQTVDQDNNRLTDALIY-TS 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +I+ A+S + SP + + +Y L + + + + Sbjct: 180 TANRTRIFRARSVDVVD--------------PSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLE----------TYRSEFHKRLTQWLFPVIFGLIS 289 +NL LNP +PN + + +E R ++ L + Sbjct: 226 Y----RNLQLHLNPLDQSPNVKRKAKSVTELARSAFPADHAELQWRQSRGLT--ALLMAL 279 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 + + R RQ + + ++L + G IP L+L + Sbjct: 280 LAISLSRVKPRQGRFSTLLPLTLLFVAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMG 339 Query: 350 FLLMIKKKYT 359 L+++ + ++ Sbjct: 340 LLMLVARDFS 349 >gi|152978627|ref|YP_001344256.1| permease YjgP/YjgQ family protein [Actinobacillus succinogenes 130Z] gi|150840350|gb|ABR74321.1| permease YjgP/YjgQ family protein [Actinobacillus succinogenes 130Z] Length = 368 Score = 153 bits (386), Expect = 5e-35, Method: Composition-based stats. Identities = 47/356 (13%), Positives = 128/356 (35%), Gaps = 22/356 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + +S ++ I + Q+++ + ++ +++ + G +P + Sbjct: 2 ILTRYLTREVLKSQAAVLFILLLIFFSQQLVRVLGSAANGNVPADLVFSLLGLGMPAMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P C + + +E+ ++ G + L++ VL L+ +I + + Sbjct: 62 LMLPLCLFIAILLTFGRLYAESEITVMRACGVGQRILVRVVLLLSFFTAILAAYNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+ + L F +++ ++ +N + +++ +R Sbjct: 122 PWAIQKQTEIVEDAKANPRMAALSAGQFMVSNNNDFVLFINNIKDNQINDVYLFQTRQKG 181 Query: 183 T--HKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G + Q + L + + S D I +F Y ++ Sbjct: 182 NAKPSVVTAEKGELKSLPNGDQILSLANSQRFEGSAALPDFRITRFDEYQAYLGHQSAGA 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 I +A + + L N ++E H RLT L L++++A Sbjct: 242 IENEAEVLDFNTLTQLN----------TPAAKTELHWRLTLIL---AVPLMALIAVPMSR 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIE----QNPYYIPILYLFLFCISSI 349 + ++ + + +L + F S + ++P++ + + + Sbjct: 289 VNPRQGRFAKMLPALLLYLIYFLAQSSLKSAGTAGKLDAGIFMPLVNIVFLLLGIV 344 >gi|188494208|ref|ZP_03001478.1| putative permease, YjgP/YjgQ family [Escherichia coli 53638] gi|188489407|gb|EDU64510.1| putative permease, YjgP/YjgQ family [Escherichia coli 53638] Length = 356 Score = 153 bits (386), Expect = 5e-35, Method: Composition-based stats. Identities = 77/370 (20%), Positives = 138/370 (37%), Gaps = 32/370 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSSQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + +N L I + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIY-TS 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +I+ A+S + SP + + +Y L + + + + Sbjct: 180 TANRTRIFRARSVDVVD--------------PSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLE----------TYRSEFHKRLTQWLFPVIFGLIS 289 +NL LNP +PN + + +E R ++ L + Sbjct: 226 Y----RNLQLHLNPLDQSPNVKRKAKSVTELARSVFPADHAELQWRQSRGLT--ALLMAL 279 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 + + R RQ + + ++L + G IP L+L + Sbjct: 280 LAISLSRVKPRQGRFSTLLPLTLLFVAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMG 339 Query: 350 FLLMIKKKYT 359 L+++ + +T Sbjct: 340 LLMLVARDFT 349 >gi|261211062|ref|ZP_05925351.1| predicted permease [Vibrio sp. RC341] gi|260839563|gb|EEX66174.1| predicted permease [Vibrio sp. RC341] Length = 366 Score = 153 bits (386), Expect = 5e-35, Method: Composition-based stats. Identities = 59/364 (16%), Positives = 126/364 (34%), Gaps = 19/364 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + ++ + S +++L I G +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASDGEIPTSMILSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LA++ + + + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RD 180 P + QL + + L++ F R D + N L +F+ RD Sbjct: 122 PWSQDKEAQLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLHNVFVAQLAPRD 181 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + ++ SG++ RQ I L DG + P D I F SY + Sbjct: 182 SVLPSVMFSNSGAVKELSDGRQIITLYDGTRYEGVPTRVDYMITNFDSYDGLIGQREVKS 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 LL ++E RL+ V L++++ A Sbjct: 242 TGRDWEALPTLSLL----------KNADRQAQAELQWRLS---LVVCIPLLTMLVVPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ + + ++ I F S ++ I+ L+ + +F +I Sbjct: 289 VNPRQGRFAKMGPAILIYLTYFLTLS-ATKSAIEDGSLPVIIGLWPVNAALLFAALIVNT 347 Query: 358 YTKI 361 I Sbjct: 348 MDSI 351 >gi|331674536|ref|ZP_08375296.1| putative permease [Escherichia coli TA280] gi|331068630|gb|EGI40025.1| putative permease [Escherichia coli TA280] Length = 356 Score = 153 bits (386), Expect = 5e-35, Method: Composition-based stats. Identities = 76/370 (20%), Positives = 138/370 (37%), Gaps = 32/370 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + +N L I + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIY-TS 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +I+ A+S + SP + + +Y L + + + + Sbjct: 180 TANRTRIFRARSVDVVD--------------PSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLE----------TYRSEFHKRLTQWLFPVIFGLIS 289 +NL LNP +PN + + +E R ++ L + Sbjct: 226 Y----RNLQLHLNPLDQSPNVKRKAKSVTELARSAFPADHAELQWRQSRGLT--ALLMAL 279 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 + + R RQ + + ++L + G IP L+L + Sbjct: 280 LAISLSRVKPRQGRFSTLLPLTLLFVAIFYGGDVCRTLVANGAIPLIPGLWLVPVLMLMG 339 Query: 350 FLLMIKKKYT 359 L+++ + ++ Sbjct: 340 LLMLVARDFS 349 >gi|238023199|ref|ZP_04603625.1| hypothetical protein GCWU000324_03126 [Kingella oralis ATCC 51147] gi|237865582|gb|EEP66722.1| hypothetical protein GCWU000324_03126 [Kingella oralis ATCC 51147] Length = 368 Score = 153 bits (386), Expect = 6e-35, Method: Composition-based stats. Identities = 54/364 (14%), Positives = 145/364 (39%), Gaps = 19/364 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + ++ + + ++ I Q + + + +++ + + G+ + P Sbjct: 2 IYHRQFIKETTLTAIAIFFVVLAILVFTQGINMLGRAADGRVAVDAVTTLIGFWTLGMTP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ I ++G I+PVL A+ L++ + + + Sbjct: 62 LLLVLTAYISTLTVLTRYWRDSEMAIWLSSGLGLKKWIRPVLTFALPLAVLVATMQISVL 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLD--DDLYIKISKYN-PNNTLQGIFIVDSR 179 P ++ + + S ++ F L D + ++ N ++ +FI D Sbjct: 122 PWAEYRSREYAEILKQKQNLSLVQAGTFSELGKKDGRVYFVETFDTDNGIMKNLFIRDID 181 Query: 180 DTQTHKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 +T + +A+ G D +++ ++L +G + D + F+ L N++ Sbjct: 182 ETGRDSVVFAKEGRFDLSNNKRTLVLTNGYRYSGIAGRGDFDQVSFQELNLII---NTTP 238 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 V+ D + + N + Y++E R++ P+ L+S++A Sbjct: 239 KVVDPIDHRRTIPTAQLIGSSNPQ------YQAELMWRVS---LPITVLLLSLLAIPLSY 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIE--QNPYYIPILYLFLFCISSIFLLMIK 355 + + + +++ G + + +E + +++ +L + L I+ I++L+ Sbjct: 290 FNTRSGNSYHVLLAVGFFLVYQNGLTLLRDAVEDGKINFWLGLLPMHLLMIACIWVLLRM 349 Query: 356 KKYT 359 + Sbjct: 350 RSMP 353 >gi|193214339|ref|YP_001995538.1| permease YjgP/YjgQ family protein [Chloroherpeton thalassium ATCC 35110] gi|193087816|gb|ACF13091.1| permease YjgP/YjgQ family protein [Chloroherpeton thalassium ATCC 35110] Length = 455 Score = 152 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 45/240 (18%), Positives = 101/240 (42%), Gaps = 6/240 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YIL+ F+ +VF+ + + + ++ +N+++++ I + Sbjct: 1 MTILTRYILKSHIGPFVFGFATVVFVFLMQFLARYLDRFVGKGLEMNVIIELIVLQIAWM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + T +M ++E+ I +G S + ++ P++ +L+ + NI Sbjct: 61 AVLAAPMAVLISTLMTFGNMVNSSEMTAIRASGISLLRIMIPIIVAGAILTYLMERFNNI 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSR 179 + P+ K L A LEEN+F + I K + ++ + G+ I D+R Sbjct: 121 VLPEANHQAKVLLMDISRAKPSFGLEENVFSDMIRGYTILARKTDEKSSNIAGVTIYDNR 180 Query: 180 DTQTHKIYYAQSGSIDLDRQ----AIILNDGEVHRK-SPISKDISIMKFKSYTLQTESAN 234 ++ + + A SG + + L GE+H +P + + F+++ + E+ Sbjct: 181 NSTRNVVITADSGFFEFTSDLRNMIMTLKHGEMHELVNPENHSYRRVNFETHKVVFEATG 240 Score = 39.6 bits (91), Expect = 0.83, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 32/89 (35%), Gaps = 4/89 (4%) Query: 263 ELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGF 322 L+ Y E HK+ + F + + L R+ +SL I F ++W F Sbjct: 354 RLINKYLVEVHKKYAIPFACLFFVFVGV---PLGVLARRGGFGIGAGLSL-IFFLLYWVF 409 Query: 323 SYIIHKIEQNPYYIPILYLFLFCISSIFL 351 K+ P + +++ + + Sbjct: 410 LIGGEKLADRDIVSPAIAMWMGNVVISVI 438 >gi|313668051|ref|YP_004048335.1| hypothetical protein NLA_7130 [Neisseria lactamica ST-640] gi|313005513|emb|CBN86949.1| conserved hypothetical integral membrane protein [Neisseria lactamica 020-06] Length = 392 Score = 152 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 47/365 (12%), Positives = 148/365 (40%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ +++ + + + + ++ + Q + + + +++ +L + G+ I + P Sbjct: 23 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWIIGMTP 82 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ ++ + + + + Sbjct: 83 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWVM 142 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLD--DDLYIKISKYN-PNNTLQGIFIVDSR 179 P ++ + + S +E F L + + ++ + ++ +F+ + Sbjct: 143 PWAELRSREYAEILKQKQELSLVEAGRFNTLGKRNGRVYFVETFDTESGIMKNLFLREQD 202 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE-SANSS 236 I +A+ G S++ +++A+ L DG + +P D + + F+ +L + Sbjct: 203 KNGNDNIIFAKEGNFSLNNNKRALELRDGYRYSGTPGKADYNRVSFRHLSLIISTTPKLI 262 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + L+ +NP ++ +E R++ + ++ ++A Sbjct: 263 DPVSHRRTIPTAQLIG--SSNPQHQ--------AELMWRISLTVSVLLLC---LLAVPLS 309 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP--YYIPILYLFLFCISSIFLLMI 354 + + I I++ + G + + +E +++ +L + + + +L+ Sbjct: 310 YFNPRGGHTYNILIAIGLFLIYQNGLTLLFEAVENGKIHFWLGLLPMHIIMFAVALILLR 369 Query: 355 KKKYT 359 + Sbjct: 370 VRSMP 374 >gi|110643219|ref|YP_670949.1| putative permease [Escherichia coli 536] gi|170683865|ref|YP_001745245.1| YjgP/YjgQ permease [Escherichia coli SMS-3-5] gi|194436786|ref|ZP_03068886.1| putative permease, YjgP/YjgQ family [Escherichia coli 101-1] gi|218706607|ref|YP_002414126.1| hypothetical protein ECUMN_3464 [Escherichia coli UMN026] gi|256024434|ref|ZP_05438299.1| hypothetical protein E4_13749 [Escherichia sp. 4_1_40B] gi|293406597|ref|ZP_06650523.1| conserved hypothetical protein [Escherichia coli FVEC1412] gi|298382336|ref|ZP_06991933.1| conserved hypothetical protein [Escherichia coli FVEC1302] gi|300900317|ref|ZP_07118496.1| conserved hypothetical protein [Escherichia coli MS 198-1] gi|312968688|ref|ZP_07782897.1| conserved hypothetical protein [Escherichia coli 2362-75] gi|331684626|ref|ZP_08385218.1| putative permease [Escherichia coli H299] gi|110344811|gb|ABG71048.1| putative permease [Escherichia coli 536] gi|170521583|gb|ACB19761.1| putative permease, YjgP/YjgQ family [Escherichia coli SMS-3-5] gi|194424268|gb|EDX40255.1| putative permease, YjgP/YjgQ family [Escherichia coli 101-1] gi|218433704|emb|CAR14621.1| conserved hypothetical protein; putative membrane protein [Escherichia coli UMN026] gi|291426603|gb|EFE99635.1| conserved hypothetical protein [Escherichia coli FVEC1412] gi|298277476|gb|EFI18992.1| conserved hypothetical protein [Escherichia coli FVEC1302] gi|300356207|gb|EFJ72077.1| conserved hypothetical protein [Escherichia coli MS 198-1] gi|312286906|gb|EFR14817.1| conserved hypothetical protein [Escherichia coli 2362-75] gi|331078241|gb|EGI49447.1| putative permease [Escherichia coli H299] Length = 356 Score = 152 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 76/370 (20%), Positives = 138/370 (37%), Gaps = 32/370 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + +N L I + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIY-TS 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +I+ A+S + SP + + +Y L + + + + Sbjct: 180 TANRTRIFRARSVDVVD--------------PSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLE----------TYRSEFHKRLTQWLFPVIFGLIS 289 +NL LNP +PN + + +E R ++ L + Sbjct: 226 Y----RNLQLHLNPLDQSPNVKRKAKSVTELARSAFPADHAELQWRQSRGLT--ALLMAL 279 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 + + R RQ + + ++L + G IP L+L + Sbjct: 280 LAISLSRVKPRQGRFSTLLPLTLLFVAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMG 339 Query: 350 FLLMIKKKYT 359 L+++ + ++ Sbjct: 340 LLMLVARDFS 349 >gi|331648771|ref|ZP_08349859.1| putative permease [Escherichia coli M605] gi|330909041|gb|EGH37555.1| permease Ygh-P1, YjgP/YjgQ family [Escherichia coli AA86] gi|331042518|gb|EGI14660.1| putative permease [Escherichia coli M605] Length = 356 Score = 152 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 76/370 (20%), Positives = 138/370 (37%), Gaps = 32/370 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + +N L I + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIY-TS 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +I+ A+S + SP + + +Y L + + + + Sbjct: 180 TANRTRIFRARSVDVVD--------------PSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLE----------TYRSEFHKRLTQWLFPVIFGLIS 289 +NL LNP +PN + + +E R ++ L + Sbjct: 226 Y----RNLQLHLNPLDQSPNVKRKAKSVTELARSVFPADHAELQWRQSRGLT--ALLMAL 279 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 + + R RQ + + ++L + G IP L+L + Sbjct: 280 LAISLSRVKPRQGRFSTLLPLTLLFVAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMG 339 Query: 350 FLLMIKKKYT 359 L+++ + ++ Sbjct: 340 LLMLVARDFS 349 >gi|293416425|ref|ZP_06659064.1| permease YjgP/YjgQ family protein [Escherichia coli B185] gi|291431781|gb|EFF04764.1| permease YjgP/YjgQ family protein [Escherichia coli B185] Length = 356 Score = 152 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 77/370 (20%), Positives = 138/370 (37%), Gaps = 32/370 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + +N L I + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIY-TS 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +I+ A+S + SP + + +Y L + + + + Sbjct: 180 TANRTRIFRARSVDVVD--------------PSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLE----------TYRSEFHKRLTQWLFPVIFGLIS 289 +NL LNP +PN + + +E R ++ L + Sbjct: 226 Y----RNLQLHLNPLDQSPNVKRKAKSVTELARSVFPADHAELQWRQSRGLT--ALLMAL 279 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 + + R RQ + + ++L + G IP L+L + Sbjct: 280 LAISLSRVKPRQGRFSTLLPLTLLFIAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMG 339 Query: 350 FLLMIKKKYT 359 L+++ + +T Sbjct: 340 LLMLVARDFT 349 >gi|33151747|ref|NP_873100.1| hypothetical protein HD0553 [Haemophilus ducreyi 35000HP] gi|33147968|gb|AAP95489.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP] Length = 367 Score = 152 bits (385), Expect = 7e-35, Method: Composition-based stats. Identities = 54/358 (15%), Positives = 125/358 (34%), Gaps = 21/358 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + I +S L ++ + + Q++ +N S +++L + G +P + Sbjct: 2 ILSRYLTKEILKSQLAILFILLLMFFSQQLISVLNSAVSGKIPTDLVLSLLGLGMPALSQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + L ++E+ ++ G + L K LFL++ + + + Sbjct: 62 FMLPLSLFIALLLTLGRFYADSEITVMRACGIGQGLLTKVALFLSLFTTALAVYNVFWLT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIV--DSR 179 P + Q+ A+A+ FS L F + + I N N L +++ D + Sbjct: 122 PWSINKQSQILAEAKSNPRFSALSVGQFMEV-GGYVLFIENINKQENKLNDVYVFQPDQQ 180 Query: 180 DTQTHKIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + A+ G ++ Q + L + + S D I F Y + Sbjct: 181 KKNRPSVVTAELGGLQALPNGDQILTLANSTRYEGSANVADFRISHFDRYQAYLGYQDIQ 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 T + N + L+N N ++E R + L++++A Sbjct: 241 TNDKRVQRANFTSLINDTSN----------EAKAELQWRF---VLIFAVPLMALLAVPMS 287 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-PYYIPILYLFLFCISSIFLLM 353 + ++ + + ++ + F S + E + + + ++M Sbjct: 288 QVNPRQGRFAKVIPAVLLYLIYFLLQSSLRSSGENDKLNATLFMPAVSIGFLMLAIIM 345 >gi|293412358|ref|ZP_06655081.1| conserved hypothetical protein [Escherichia coli B354] gi|291469129|gb|EFF11620.1| conserved hypothetical protein [Escherichia coli B354] Length = 356 Score = 152 bits (385), Expect = 7e-35, Method: Composition-based stats. Identities = 71/363 (19%), Positives = 141/363 (38%), Gaps = 18/363 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + + N L I + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIY-TS 179 Query: 180 DTQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 +I+ A+S + ++ ++L++G + +D + ++ L + Sbjct: 180 TANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRHLQLHL-NPLDQ 238 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + +K ++++ L + +E R ++ L + + + R Sbjct: 239 SPNVKRKAKSVTEL----------ARSVFPADHAELQWRQSRGLT--ALLMALLAISLSR 286 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 RQ + + ++L + G IP L+L + L+++ + Sbjct: 287 VKPRQGRFSTLLPLTLLFVAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLIGLLMLVAR 346 Query: 357 KYT 359 ++ Sbjct: 347 DFS 349 >gi|157162460|ref|YP_001459778.1| YjgP/YjgQ permease [Escherichia coli HS] gi|157068140|gb|ABV07395.1| putative permease, YjgP/YjgQ family [Escherichia coli HS] Length = 356 Score = 152 bits (384), Expect = 7e-35, Method: Composition-based stats. Identities = 77/370 (20%), Positives = 138/370 (37%), Gaps = 32/370 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSSQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + +N L I + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTKDNGRMILSQTVDQDNNRLTDALIY-TS 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +I+ A+S + SP + + +Y L + + + + Sbjct: 180 TANRTRIFRARSVDVVD--------------PSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLE----------TYRSEFHKRLTQWLFPVIFGLIS 289 +NL LNP +PN + + +E R ++ L + Sbjct: 226 Y----RNLQLHLNPLDQSPNVKRKAKSVTELARSVFPADHAELQWRQSRGLT--ALLMAL 279 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 + + R RQ + + ++L + G IP L+L + Sbjct: 280 LAISLSRVKPRQGRFSTLLPLTLLFVAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMG 339 Query: 350 FLLMIKKKYT 359 L+++ + +T Sbjct: 340 LLMLVARDFT 349 >gi|254229296|ref|ZP_04922714.1| putative permease, YjgP/YjgQ family [Vibrio sp. Ex25] gi|262393202|ref|YP_003285056.1| hypothetical protein VEA_002429 [Vibrio sp. Ex25] gi|151938220|gb|EDN57060.1| putative permease, YjgP/YjgQ family [Vibrio sp. Ex25] gi|262336796|gb|ACY50591.1| putative membrane protein [Vibrio sp. Ex25] Length = 366 Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats. Identities = 53/357 (14%), Positives = 123/357 (34%), Gaps = 25/357 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + + + S ++ I G +P + Sbjct: 2 IIVRYLIRETLKSQFAIFFVLFLVFVSQKFISVLADASDGDIPAGLIFSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+++++ TG L++ L+LA++ S + + Sbjct: 62 LMLPLSLYIGILITFGRLYAESEIVVMNATGIGNKFLVQAALYLALITSAVAAFNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RD 180 P + ++QL + + L++ F D + +NTL +F+ RD Sbjct: 122 PWSQDRVEQLYEQVAAENSVDLLKKGQFQGTPDGSSVVFIDDIKDNTLSNVFVAQMRPRD 181 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + ++ SG + RQ I + +G + P + I KF Y Sbjct: 182 SVLPSVMFSSSGEVKELSDGRQVITMKEGTRYEGVPTRVEYMITKFDEYEGVIGQREVKK 241 Query: 238 IVLKANDQNLSFLL-NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 L+ +P+P ++E R++ + L++++ Sbjct: 242 KGRDWEAYPTVDLIGHPDPE-----------AQAELQWRISL-FVCI--PLLTMLVIPLS 287 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-----NPYYIPILYLFLFCISS 348 A+ ++ + + ++ I F S +E PI + L Sbjct: 288 AVNPRQGRFAKMGPAILIYLAYFLAISATKSALEDGDIPAAIGMWPINAMLLIVAIM 344 >gi|91228859|ref|ZP_01262764.1| putative permease [Vibrio alginolyticus 12G01] gi|269966356|ref|ZP_06180442.1| conserved hypothetical protein [Vibrio alginolyticus 40B] gi|91187597|gb|EAS73924.1| putative permease [Vibrio alginolyticus 12G01] gi|269829033|gb|EEZ83281.1| conserved hypothetical protein [Vibrio alginolyticus 40B] Length = 366 Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats. Identities = 53/357 (14%), Positives = 123/357 (34%), Gaps = 25/357 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + + + S ++ I G +P + Sbjct: 2 IIVRYLIRETLKSQFAIFFVLFLVFVSQKFISVLADASDGDIPAGLIFSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+++++ TG L++ L+LA++ S + + Sbjct: 62 LMLPLSLYIGILITFGRLYAESEIVVMNATGIGNKFLVQAALYLALITSAVAAFNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RD 180 P + ++QL + + L++ F D + +NTL +F+ RD Sbjct: 122 PWSQDRVEQLYEQVASENSVDLLKKGQFQGTPDGSSVVFIDDIKDNTLSNVFVAQMRPRD 181 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + ++ SG + RQ I + +G + P + I KF Y Sbjct: 182 SVLPSVMFSSSGEVKELSDGRQIITMKEGTRYEGVPTRVEYMITKFDEYEGVIGQREVKK 241 Query: 238 IVLKANDQNLSFLL-NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 L+ +P+P ++E R++ + L++++ Sbjct: 242 KGRDWEAYPTVDLIGHPDPE-----------AQAELQWRISL-FVCI--PLLTMLVIPLS 287 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-----NPYYIPILYLFLFCISS 348 A+ ++ + + ++ I F S +E PI + L Sbjct: 288 AVNPRQGRFAKMGPAILIYLAYFLAISATKSALEDGDIPAAIGMWPINAMLLIVAIM 344 >gi|323697852|ref|ZP_08109764.1| permease YjgP/YjgQ family protein [Desulfovibrio sp. ND132] gi|323457784|gb|EGB13649.1| permease YjgP/YjgQ family protein [Desulfovibrio desulfuricans ND132] Length = 391 Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats. Identities = 67/364 (18%), Positives = 139/364 (38%), Gaps = 14/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + I + + F ++ ++ + V ++LQ +L S + +L++ YL P Sbjct: 1 MKLLQRQIFLELCKLFGLTVSCLLGLILVGRMLQLRSLFLSQNIGVLNILQLFFYLTPFF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++TP + M+ + EL+ + +G S ++ + L ++F F Sbjct: 61 LLLITPIATMLSVFLTFLRMSTDNELVALKASGVSLYRMLPAPVLFCSLCTLFAFFISFW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 K + L+ +F + ++ + + L+ F+ D Sbjct: 121 GLAWGMDMFKTKLYYFAKTHSKFALQPGVFNKEFPNITFYAHQVDNEKGELKFAFVRDDS 180 Query: 180 DTQTHKIYYAQSGSIDLDRQ----AIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 T + A + + Q ++ ++G + R+S +++I+KF+ Y+++ + Sbjct: 181 IKGTSVVVVAPEAEVVSNPQEAKIHVVFHNGRIFRQS--GDELNILKFRKYSIKLDLGKL 238 Query: 236 ST----IVLKANDQNLSFLLNPNPNNPNYRPELLETYR---SEFHKRLTQWLFPVIFGLI 288 T KA D L + ++ E +R +EF+KRLT L I GL Sbjct: 239 LTGFNFAEQKAKDMPFFRLRDIRKDHSLMPHENERFFRKVDTEFYKRLTLPLGCFILGLF 298 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 +I A +RQ+ + + + +F + P Y LF + Sbjct: 299 AIPIASIFRGLRQQYGLLLAMGLFMVYYTMFSIGVSMGESGTIPPEYGMWAPDILFIFVA 358 Query: 349 IFLL 352 + L Sbjct: 359 LAGL 362 >gi|163803712|ref|ZP_02197572.1| putative permease [Vibrio sp. AND4] gi|159172495|gb|EDP57360.1| putative permease [Vibrio sp. AND4] Length = 366 Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats. Identities = 51/357 (14%), Positives = 128/357 (35%), Gaps = 21/357 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + + + S ++ + G +P + Sbjct: 2 IIVRYLIRETLKSQFAIFFVLFLVFLSQKFISVLAKASDGDIPAGLIFSVVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+++++ TG L++ L LAI+ S + + Sbjct: 62 LMLPLSLYIGILITFGRLYAESEIVVMNATGIGNKFLVQAALCLAIITSGVAAFNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RD 180 P + ++QL + + + L++ F D + ++TL +F+ RD Sbjct: 122 PWSQDRVEQLYDQVEAENSVDLLQKGQFQGTPDGSSVVFIDDIKDSTLSNVFVAQMRPRD 181 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + ++ SG + RQ I ++DG + P + + KF Y Sbjct: 182 SVLPSVMFSSSGEVKELSDGRQVITMHDGSRYEGVPTRVEYMVTKFDQYEGVIGQREVKQ 241 Query: 238 IVLKANDQNLSFLL-NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 L+ +P+P ++E R++ + L++++ Sbjct: 242 KGRDWEAYPTLDLIGHPDPE-----------AQAELQWRISL-FVCI--PLLTMLVIPLS 287 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFLL 352 A+ ++ + + ++ I F S +E+ I ++ + + +L Sbjct: 288 AVNPRQGRFAKMGPAILIYLAYFLAISATKSALEEGTIPAAIGMWPINAMLLIVAIL 344 >gi|193067274|ref|ZP_03048242.1| putative permease, YjgP/YjgQ family [Escherichia coli E110019] gi|209920456|ref|YP_002294540.1| hypothetical protein ECSE_3265 [Escherichia coli SE11] gi|218555554|ref|YP_002388467.1| hypothetical protein ECIAI1_3129 [Escherichia coli IAI1] gi|218696689|ref|YP_002404356.1| hypothetical protein EC55989_3396 [Escherichia coli 55989] gi|260857120|ref|YP_003231011.1| hypothetical protein ECO26_4088 [Escherichia coli O26:H11 str. 11368] gi|260869742|ref|YP_003236144.1| hypothetical protein ECO111_3809 [Escherichia coli O111:H- str. 11128] gi|293449328|ref|ZP_06663749.1| hypothetical protein ECCG_02359 [Escherichia coli B088] gi|300815538|ref|ZP_07095762.1| conserved hypothetical protein [Escherichia coli MS 107-1] gi|192959231|gb|EDV89666.1| putative permease, YjgP/YjgQ family [Escherichia coli E110019] gi|209913715|dbj|BAG78789.1| conserved hypothetical protein [Escherichia coli SE11] gi|218353421|emb|CAU99487.1| conserved hypothetical protein; putative membrane protein [Escherichia coli 55989] gi|218362322|emb|CAQ99944.1| conserved hypothetical protein; putative membrane protein [Escherichia coli IAI1] gi|257755769|dbj|BAI27271.1| conserved predicted membrane protein [Escherichia coli O26:H11 str. 11368] gi|257766098|dbj|BAI37593.1| conserved predicted membrane protein [Escherichia coli O111:H- str. 11128] gi|291322418|gb|EFE61847.1| hypothetical protein ECCG_02359 [Escherichia coli B088] gi|300531467|gb|EFK52529.1| conserved hypothetical protein [Escherichia coli MS 107-1] gi|320201894|gb|EFW76469.1| Permease Ygh-P1, YjgP/YjgQ family [Escherichia coli EC4100B] gi|323173775|gb|EFZ59404.1| hypothetical protein ECLT68_2093 [Escherichia coli LT-68] gi|323178689|gb|EFZ64265.1| hypothetical protein ECOK1180_2421 [Escherichia coli 1180] gi|323183569|gb|EFZ68966.1| hypothetical protein ECOK1357_3349 [Escherichia coli 1357] gi|323946693|gb|EGB42714.1| YjgP/YjgQ permease [Escherichia coli H120] gi|324018177|gb|EGB87396.1| hypothetical protein HMPREF9542_03232 [Escherichia coli MS 117-3] Length = 356 Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats. Identities = 76/370 (20%), Positives = 138/370 (37%), Gaps = 32/370 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + +N L I + Sbjct: 121 GRPWAYTQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIY-TS 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +I+ A+S + SP + + +Y L + + + + Sbjct: 180 TANRTRIFRARSVDVVD--------------PSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLE----------TYRSEFHKRLTQWLFPVIFGLIS 289 +NL LNP +PN + + +E R ++ L + Sbjct: 226 Y----RNLQLHLNPLDQSPNVKRKAKSVTELARSAFPADHAELQWRQSRGLT--ALLMAL 279 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 + + R RQ + + ++L + G IP L+L + Sbjct: 280 LAISLSRVKPRQGRFSTLLPLTLLFIAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMG 339 Query: 350 FLLMIKKKYT 359 L+++ + ++ Sbjct: 340 LLMLVARDFS 349 >gi|300824070|ref|ZP_07104191.1| conserved hypothetical protein [Escherichia coli MS 119-7] gi|331669797|ref|ZP_08370642.1| putative permease [Escherichia coli TA271] gi|331679054|ref|ZP_08379726.1| putative permease [Escherichia coli H591] gi|300523460|gb|EFK44529.1| conserved hypothetical protein [Escherichia coli MS 119-7] gi|324119792|gb|EGC13672.1| permease YjgP/YjgQ family protein [Escherichia coli E1167] gi|331062710|gb|EGI34624.1| putative permease [Escherichia coli TA271] gi|331073119|gb|EGI44442.1| putative permease [Escherichia coli H591] Length = 356 Score = 152 bits (384), Expect = 9e-35, Method: Composition-based stats. Identities = 76/370 (20%), Positives = 138/370 (37%), Gaps = 32/370 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + +N L I + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIY-TS 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +I+ A+S + SP + + +Y L + + + + Sbjct: 180 TANRTRIFRARSVDVVD--------------PSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLE----------TYRSEFHKRLTQWLFPVIFGLIS 289 +NL LNP +PN + + +E R ++ L + Sbjct: 226 Y----RNLQLHLNPLDQSPNVKRKAKSVTELARSAFPADHAELQWRQSRGLT--ALLMAL 279 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 + + R RQ + + ++L + G IP L+L + Sbjct: 280 LAISLSRVKPRQGRFSTLLPLTLLFIAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMG 339 Query: 350 FLLMIKKKYT 359 L+++ + ++ Sbjct: 340 LLMLVARDFS 349 >gi|209694120|ref|YP_002262048.1| putative permease [Aliivibrio salmonicida LFI1238] gi|208008071|emb|CAQ78212.1| putative permease [Aliivibrio salmonicida LFI1238] Length = 370 Score = 152 bits (384), Expect = 9e-35, Method: Composition-based stats. Identities = 52/360 (14%), Positives = 129/360 (35%), Gaps = 22/360 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ +S L + I + +Q + S ++L + GY +P + Sbjct: 2 IIIRYLIKETLKSQLAIFFVLFLIFMSQKFIQILADASDGDIPGGLILSLVGYNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LA++ ++ + Sbjct: 62 LMLPLSIFIGILLTFGRLYAESEITVMNATGMGNSILIRAALYLALITGSIAAVNSLWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNN--TLQGIFIVD-- 177 P + +L + L++ F D + I + L IF+ Sbjct: 122 PWSQEQSTKLMENVESDAGIELLQKGQFKPSPDGKAVVFIDDISDKGGKHLVNIFLAQPV 181 Query: 178 SRDTQTHKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 D+ + ++ G++ D RQ ++L++G + P D F+SY + Sbjct: 182 PNDSLRPSVLISEKGTVKQLDDGRQVLVLDNGTRYEGIPTRLDYLESNFESYEVLIGQKE 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + L+ ++E R++ + + L+++V Sbjct: 242 VKEKRRDWDALPTLDLI----------KRTELEAKAELQWRISL-ILCI--PLLTMVVVP 288 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-NPYYIPILYLFLFCISSIFLLM 353 A+ ++ + + ++ + F S IE+ + + L+ + I +++ Sbjct: 289 LSAVNPRQGRFAKLAPAILLYLAYFLSLSAGKSAIEEGSLHPSVGLWAINAVLLIIGIIL 348 >gi|291284363|ref|YP_003501181.1| Permease YjgP/YjgQ family protein precursor [Escherichia coli O55:H7 str. CB9615] gi|301017325|ref|ZP_07182089.1| conserved hypothetical protein [Escherichia coli MS 69-1] gi|331654591|ref|ZP_08355591.1| putative permease [Escherichia coli M718] gi|331664594|ref|ZP_08365500.1| putative permease [Escherichia coli TA143] gi|290764236|gb|ADD58197.1| Permease YjgP/YjgQ family protein precursor [Escherichia coli O55:H7 str. CB9615] gi|300400298|gb|EFJ83836.1| conserved hypothetical protein [Escherichia coli MS 69-1] gi|320656364|gb|EFX24271.1| Permease YjgP/YjgQ family protein precursor [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661735|gb|EFX29143.1| Permease YjgP/YjgQ family protein precursor [Escherichia coli O55:H7 str. USDA 5905] gi|320666886|gb|EFX33862.1| Permease YjgP/YjgQ family protein precursor [Escherichia coli O157:H7 str. LSU-61] gi|331047973|gb|EGI20050.1| putative permease [Escherichia coli M718] gi|331058525|gb|EGI30506.1| putative permease [Escherichia coli TA143] Length = 356 Score = 152 bits (384), Expect = 9e-35, Method: Composition-based stats. Identities = 76/370 (20%), Positives = 138/370 (37%), Gaps = 32/370 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + +N L I + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIY-TS 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +I+ A+S + SP + + +Y L + + + + Sbjct: 180 TANRTRIFRARSVDVVD--------------PSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLE----------TYRSEFHKRLTQWLFPVIFGLIS 289 +NL LNP +PN + + +E R ++ L + Sbjct: 226 Y----RNLQLHLNPLDQSPNVKRKAKSVTELARSVFPADHAELQWRQSRGLT--ALLMAL 279 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 + + R RQ + + ++L + G IP L+L + Sbjct: 280 LAISLSRVKPRQGRFSTLLPLTLLFIAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMG 339 Query: 350 FLLMIKKKYT 359 L+++ + ++ Sbjct: 340 LLMLVARDFS 349 >gi|16273591|ref|NP_439846.1| hypothetical protein HI1704 [Haemophilus influenzae Rd KW20] gi|1176472|sp|P45333|LPTF_HAEIN RecName: Full=Lipopolysaccharide export system permease protein lptF gi|1574558|gb|AAC23350.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20] Length = 372 Score = 152 bits (384), Expect = 9e-35, Method: Composition-based stats. Identities = 46/356 (12%), Positives = 126/356 (35%), Gaps = 17/356 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + +S + L ++ I + Q ++ + ++ +++ + G +PT+ Sbjct: 2 ILIRYLIKEVFKSQIAILLILLLIFFSQQFVRVLGAAANGNVPADLVFSLLGLGMPTMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P C + + +E+ ++ G + L+K L +++L + + + Sbjct: 62 LMLPLCLFIAILLTFGRLYAESEITVMRACGVGQRILVKVALIMSLLTAGIAAYNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RD 180 P + A+ T L F +++ + +N ++ +++ + Sbjct: 122 PWAIQKQVNMVEDAKANPTVGVLSSGQFISTNNNNVVLFIDKIKDNQIRNVYLFQMTPQK 181 Query: 181 TQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G + Q + L + + + D I F Y ++ Sbjct: 182 QTKPSVITAEKGELIALPNGDQVLNLKNTKRVEGTSALPDFRITHFDEYHAYLGYQSAEN 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + LS L++ + ++ ++E H R+T L + LI++ R Sbjct: 242 TNDEVAELTLSQLIDLDSSSA----------KAELHWRITLILAVPLMALIAVP--LSRV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 RQ + + L S+ ++ L + +++ Sbjct: 290 NPRQGRFAKILPALLLYLIYFLLQSSFKSAGSAGKLEAELLMPLVNIGFFLLAVVL 345 >gi|291532164|emb|CBL05277.1| Predicted permeases [Megamonas hypermegale ART12/1] Length = 361 Score = 152 bits (384), Expect = 9e-35, Method: Composition-based stats. Identities = 57/366 (15%), Positives = 133/366 (36%), Gaps = 18/366 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPT 59 M+ + YIL+ +F+ + +L+ ++ S + ++++ Y +P Sbjct: 1 MRILDKYILKETIMTFIFGICAFSAVFLGSGTLLRIAQYITQYGASFSAIVRLIIYSLPG 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ P + ++ N+E++ + G S L+ PV+ ++ +SIF Sbjct: 61 IIVWTFPMSMLLAALLTFGRLSGNSEIIAMKACGVSFKRLVTPVIAFSLGVSIFSIGFNE 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD----LYIKISKYNPN-NTLQGIF 174 + P L T +E++ + D + KY+ L + Sbjct: 121 YVVPASNQAYADLVRYEIQGNTSPESQEHIIIKQIQDGNIQRLVYARKYDAETGNLDNLS 180 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 I + + ++ A+ +D ++ +G ++ S + + +MKF S L Sbjct: 181 IQEFEQGKMVRVENAEYAKWSVDE--WVMYNGVLYDLSQPNTE-RMMKFDSQVLPINQTP 237 Query: 235 SSTIV--LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 I K ++ + L N + + E ++R T + ++F LI Sbjct: 238 KQIIKSQKKPDEMTIKELREQ-INIMKSQYVDTKKLEIELYQRFTVPMASLMFALIGAPL 296 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--FCISSIF 350 + R F I +++ + I QN + P++ +++ Sbjct: 297 GIQPN----RSSSSIGFGISIIIIFIYYTLMTLAGAIGQNSFIPPVIAVWIPNIVTLIAG 352 Query: 351 LLMIKK 356 + +I+K Sbjct: 353 IYLIRK 358 >gi|159028498|emb|CAO87305.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 389 Score = 152 bits (384), Expect = 9e-35, Method: Composition-based stats. Identities = 51/372 (13%), Positives = 131/372 (35%), Gaps = 33/372 (8%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + YI + FL + + + + ++ S + LKI +P Sbjct: 17 TILDRYIFVELLLPFLFGMGLFTSLGVAIGTLFDLVRRITESGLPFTLALKILLLKMPEF 76 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + + + ++EL+ + G S LI P + L+++++ +I + Sbjct: 77 IVLAFPMSILLAALMAYSRLASDSELIAFKSIGISVYRLIIPAIVLSLIVTGLTYIFNDY 136 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF------FRLDDD-------LYIKISKYNPN 167 + P KA S++E+N+ R D + ++ Sbjct: 137 VAPAASYEANATMTKALRPNRKSFIEDNIIYPEYGKVRPPDGGEAQTVLRRLFYAERFNG 196 Query: 168 NTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKS-- 225 + G+ I+D + ++I +++ S ++++ +G ++ P +I++F+ Sbjct: 197 QEMLGLTILDRTQPEVNQIITSETASWNIEKNIWDFYNGTIYLIDPNGSYRNIVRFQHQQ 256 Query: 226 -------YTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQ 278 L + S + L+ + L L + P + + ++++ Sbjct: 257 LALPRTPLDLAFRGRDGSEMTLRQAREYLEIL------QLSGNPTKTRKLQVQIEQKISL 310 Query: 279 WLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 ++FG+I + Q F + ++ S++ + P+ Sbjct: 311 PFVCLVFGMIGAALGLRP----QNSNKATSFGICIVLIFSYYLLSFVTSSLGIGGVLTPL 366 Query: 339 LYLFLFCISSIF 350 + +L I + Sbjct: 367 MAAWLPNILGLT 378 >gi|264678996|ref|YP_003278903.1| permease YjgP/YjgQ [Comamonas testosteroni CNB-2] gi|262209509|gb|ACY33607.1| permease YjgP/YjgQ [Comamonas testosteroni CNB-2] Length = 369 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 61/367 (16%), Positives = 139/367 (37%), Gaps = 25/367 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ I + + RSF + + ++ + + +++ + + S + ++ + G+ + LP Sbjct: 2 LFDSSIRKELARSFGATAVVLITVVMTMMLIRTLGQAYKGSVSPSDVMLVMGFTVLGQLP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + + L+ M R++E++I G +L+KP+L A + + + + Sbjct: 62 TILGLSLFVAIVGSLSRMYRDSEMVIWFAAGQGLASLLKPLLRFAWPVILITAVLALGVL 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNT-LQGIFIVDSRD 180 P I+Q+ + Q + F + K +P++ +F+V SRD Sbjct: 122 PWSYQQIEQIKTQFQQRSDLDRIAPGEFQESAGGTRVFFVDKDSPSDMAASNVFVV-SRD 180 Query: 181 TQTHKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + A+ + ++ +IL DG+ + I +FK Y +Q ++ N I Sbjct: 181 PGKESVTSAKGAHLAVIKGQRMVILEDGQRMETRSDDGSVRITEFKEYGVQVDNDNPVAI 240 Query: 239 -VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + A L+ + RS RL + F ++ + + Sbjct: 241 EEMAARSMPTKDLIGKDEP----------IARSVLAWRLGLPFAALNFVILGLAI---SS 287 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHK--IEQNPYYIPILYLF---LFCISSIFLL 352 + + + I+L +F V++ + IL L + +S + LL Sbjct: 288 VNPRAGNSSSLMIAL-FAFIVYYNLMTLGESWVSANKIGMWGILGLLHGSILIVSVLVLL 346 Query: 353 MIKKKYT 359 +++ Sbjct: 347 ARHFRWS 353 >gi|193062108|ref|ZP_03043204.1| putative permease, YjgP/YjgQ family [Escherichia coli E22] gi|192932328|gb|EDV84926.1| putative permease, YjgP/YjgQ family [Escherichia coli E22] Length = 356 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 76/370 (20%), Positives = 138/370 (37%), Gaps = 32/370 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSSQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + +N L I + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIY-TS 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +I+ A+S + SP + + +Y L + + + + Sbjct: 180 TANRTRIFRARSVDVVD--------------PSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLE----------TYRSEFHKRLTQWLFPVIFGLIS 289 +NL LNP +PN + + +E R ++ L + Sbjct: 226 Y----RNLQLHLNPLDQSPNVKRKAKSVTELARSVFPADHAELQWRQSRGLT--ALLMAL 279 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 + + R RQ + + ++L + G IP L+L + Sbjct: 280 LAISLSRVKPRQGRFSTLLPLTLLFIAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMG 339 Query: 350 FLLMIKKKYT 359 L+++ + ++ Sbjct: 340 LLMLVARDFS 349 >gi|92115033|ref|YP_574961.1| permease YjgP/YjgQ [Chromohalobacter salexigens DSM 3043] gi|91798123|gb|ABE60262.1| permease YjgP/YjgQ [Chromohalobacter salexigens DSM 3043] Length = 386 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 49/365 (13%), Positives = 129/365 (35%), Gaps = 23/365 (6%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ R I + ++ + + ++ + +IL + Y +P + +V Sbjct: 31 RYLTREILATMAAVAGVLLLVIMGSRFIRYFGDAAQGDIPASILGTLMLYHLPGFMELVL 90 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P F + + N+E+ ++ G S L++ L+ A+L+++ + + + P Sbjct: 91 PLSFFLGILLAFGQLYLNSEITVLVACGISPNRLLRVTLWPALLVALLVALCSLWLTPNG 150 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDS--RDTQ 182 + + + + L FS L+ F N + + ++ +FI + R Sbjct: 151 ARHNEMVLEEQKSRLDFSVLQPGRFQEFGSGRTAYTESLNDDRSRMESVFISERQPRSDG 210 Query: 183 THKIYY--AQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 T + A G +D ++L DGE + P + ++F +Y ++ A+ Sbjct: 211 TPETVVTRADGGYQTVDDDTGSRFLVLTDGERYSVEPGNHVAERVQFDTYAVRLSQASER 270 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + A + LL + RL+ L + +++++A Sbjct: 271 VDLQAAELTSTPQLL----------ERGGSEAWANLQWRLSMPL---MVPILTLLALPLS 317 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-NPYYIPILYLFLFCISSIFLLMIK 355 + ++ + + ++ + I + + ++ + + M + Sbjct: 318 RVNPRQGRFAKLLPAIFLHISYLSLLLAAQDAIARGSLAPTIGMWPIHLGYLLLGVWMTR 377 Query: 356 KKYTK 360 + + Sbjct: 378 RDQRR 382 >gi|253686792|ref|YP_003015982.1| permease YjgP/YjgQ family protein [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251753370|gb|ACT11446.1| permease YjgP/YjgQ family protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 371 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 57/364 (15%), Positives = 138/364 (37%), Gaps = 30/364 (8%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N+++ + G +P ++ Sbjct: 2 IIIRYLVRETFKSQLAILFILLLIFFCQKLVRILGAAVDGEIPTNLVISLLGLGVPEMVQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ G + L+K L LA+ ++ I+ + Sbjct: 62 LILPLSLFLGVLMTFGRLYAESEITVMHACGLGKRVLLKAALALAVFTAVIATINVMWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +++ A+A+ + L E F + + Q +F+ R + Sbjct: 122 PWSSRHQEEVLAEAKANPGMATLVEGQFQSAQGGNAVLFVGNVKGSEFQHVFLAQLRPSG 181 Query: 183 T--HKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A G I + Q + L++G + + + +D I F +Y + + Sbjct: 182 NARPSVVVADRGHIKQNEDGAQVVTLDNGSRYEGTALLRDFRITDFTNYQAVIGHQSVTL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 ++ L + + ++ R+EFH RLT L +I L+ + Sbjct: 242 NNSDVQQMDMQTLWHSDAHDA----------RAEFHWRLTLILSVLIMALMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFL-----FCISSI 349 RQ + +S+ + ++ F + + N P+++++L F I+ + Sbjct: 290 NPRQGR-----VLSMLPAMLLYLIFFLLQSSLRSNASKGKIDPMVWVWLTNLMYFGIAVM 344 Query: 350 FLLM 353 L Sbjct: 345 LNLW 348 >gi|327398771|ref|YP_004339640.1| permease YjgP/YjgQ family protein [Hippea maritima DSM 10411] gi|327181400|gb|AEA33581.1| permease YjgP/YjgQ family protein [Hippea maritima DSM 10411] Length = 348 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 73/355 (20%), Positives = 136/355 (38%), Gaps = 18/355 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K + YIL+ + SF++S I + + +++ +L+ S +LLKI GY + + Sbjct: 2 LKKLDRYILKSLIVSFVISFFVIAVVMLIGDLVKLYDLLFGKGSSFIVLLKILGYTVVFL 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + V + ++ N+E+ I + G S + P ++ + +FLF S Sbjct: 62 LAFIVPMALTIAINYVYSDLSNNSEITAIRSCGISLFRVYFPAFLFSVAVFVFLFYSIAF 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSR 179 + PK R + + AK ++ L+ N+F+ D + I +P+ L+ +F Sbjct: 122 VAPKARLSYRVEIAKTFRNKVYAALKPNMFYDKVDGVM-WIKNLSPDKKHLKDVFFA--- 177 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 Q KI+ A+ G I+ V SP F Y L + Sbjct: 178 --QKGKIFLAKKGDFKDIPSGILAEFFNVKMYSPSKSGFEYGSFDRYELAFLTGRG---Y 232 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWL-FPVIFGLISIVAADKRAL 298 K N N F+ N + + + R+ + + + +S++A Sbjct: 233 FKPNKNNTRFMSFGEVVNYYSKSKSKDAL-----YRINKIVSMSMSVFALSLIAFSFGIT 287 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHK--IEQNPYYIPILYLFLFCISSIFL 351 + K I SL + F + NPY+I + + F S Sbjct: 288 FSRSGKSAGIVASLFLFFMFYIILMLSESLCDATGNPYFIYLPNVVAFVFGSYIF 342 >gi|300973446|ref|ZP_07172202.1| conserved hypothetical protein [Escherichia coli MS 45-1] gi|300410788|gb|EFJ94326.1| conserved hypothetical protein [Escherichia coli MS 45-1] gi|315291260|gb|EFU50620.1| conserved hypothetical protein [Escherichia coli MS 153-1] Length = 356 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 75/354 (21%), Positives = 129/354 (36%), Gaps = 32/354 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYASVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + + N L I + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIY-TS 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +I+ A+S + SP + + +Y L + + + + Sbjct: 180 TANRTRIFRARSVDVVD--------------PSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLE----------TYRSEFHKRLTQWLFPVIFGLIS 289 +NL LNP +PN + + +E R ++ L + Sbjct: 226 Y----RNLQLHLNPLDQSPNVKRKAKSVTELARSVFPADHAELQWRQSRGLT--ALLMAL 279 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 + + R RQ + + ++L + G IP L+L Sbjct: 280 LAISLSRVKPRQGRFSTLLPLTLLFVAIFYGGDVCRTLVANGAIPLIPGLWLVP 333 >gi|254282226|ref|ZP_04957194.1| queuine tRNA-ribosyltransferase [gamma proteobacterium NOR51-B] gi|219678429|gb|EED34778.1| queuine tRNA-ribosyltransferase [gamma proteobacterium NOR51-B] Length = 389 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 54/362 (14%), Positives = 135/362 (37%), Gaps = 23/362 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M++ Y+ I L + + + + + ++ + + + +ILL + + +P+ Sbjct: 28 MRTL-KYLTGDILAHALAVSVVLFLVVFSGRFIRYLAEAAVGAITSDILLPVMLFKLPSF 86 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + L + ++EL+++ G L +L A+ S+ + Sbjct: 87 FELILPLGLFIGILLSLGRLYADSELVVLKACGVGPGKLATYLLLPALAFSLVVGFLSLY 146 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYNPNNTLQGIFIVDSR 179 + P+ + + + + A L E F + ++ + + + IF+V+ Sbjct: 147 LAPEGSARAQAMLDNPRSAEGLQQLSEGRFKKQRSGNFVSYAETISDDGVMHNIFVVEKS 206 Query: 180 DTQTHKI--YYAQSGSIDLD----RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 + T + YA +G + +D R+ + L DG + P D ++ KFK Y Sbjct: 207 EAGTARTRVTYADAGEVVVDPENGRRYLELRDGARYEGVPGQADYTVTKFKRYGELIPER 266 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 D + LL + + + ++ + R + PV+ +IS++A Sbjct: 267 EGGIRDNLKTDAISTRLLLSDFSP---------SAQAALYWRFS---LPVLVPVISLIAL 314 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFS---YIIHKIEQNPYYIPILYLFLFCISSIF 350 +R + + +L + F G + + + +++ + +F + Sbjct: 315 PLSRTDARRGRYAKLAPALLVFLAYFIGLTQARTAVESGDSGWWFVGVHLIFTLLAVVLT 374 Query: 351 LL 352 Sbjct: 375 FW 376 >gi|124514758|gb|EAY56270.1| putative permease, YjgP/YjgQ family [Leptospirillum rubarum] Length = 378 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 53/337 (15%), Positives = 119/337 (35%), Gaps = 21/337 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+ + F++ L +V + Q L +NL+ + S+ +L++ + P Sbjct: 1 MKIIHRYLFVELLPPFVIGLLVLVVLILTQQTLMIMNLLVNKGLSIPTVLRLVMMIFPQF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P +T + + E+ + +G L+ P++ A L + F Sbjct: 61 LTMIIPVSVLAASTATFNRLASDGEITALKASGIGLSRLLWPLVLFAFLGYVGSFYMSLK 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 E +++++ + + +F D I + + + +QG+FI Sbjct: 121 AEETQGMSLQEMISTVLKKKMSLGIRPQVFNNFMDRFVIYVDRMPTFSRMQGVFIYQEGK 180 Query: 181 TQTHKI-YYAQSGSIDLDRQA-----IILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 ++ A+ GS+ + I L G + + ++F SY L + Sbjct: 181 GKSPSTVIMAREGSLLNEENGRPGIRIQLRSGTLLQGGAAQ---QFVRFSSYDLTIFGKS 237 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + T + L N P+ + E R + +P + + + Sbjct: 238 AGTTAKPPTIREL-------ENKIAGSPKPDVSLLRELEDRYKNYTYPFSCLIFAFLGIP 290 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ 331 ++ K+ + + F YI++ ++ Sbjct: 291 FGIYAKRSGKLAGFVFATASVI-----FFYILNTVDD 322 >gi|194426331|ref|ZP_03058886.1| putative permease, YjgP/YjgQ family [Escherichia coli B171] gi|194415639|gb|EDX31906.1| putative permease, YjgP/YjgQ family [Escherichia coli B171] gi|195183223|dbj|BAG66768.1| putative permease [Escherichia coli O111:H-] Length = 356 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 76/370 (20%), Positives = 139/370 (37%), Gaps = 32/370 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSSQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + + +N L I + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILLQTVDQDNNRLTDALIY-TS 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +I+ A+S + SP + + +Y L + + + + Sbjct: 180 TANRTRIFRARSVDVVD--------------PSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLE----------TYRSEFHKRLTQWLFPVIFGLIS 289 +NL LNP +PN + + +E R ++ L + Sbjct: 226 Y----RNLQLHLNPLDQSPNVKRKAKSVTELARSVFPADHAELQWRQSRGLT--ALLMAL 279 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 + + R RQ + + ++L + G IP L+L + Sbjct: 280 LAISLSRVKPRQGRFSTLLPLTLLFIAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMG 339 Query: 350 FLLMIKKKYT 359 L+++ + ++ Sbjct: 340 LLMLVARDFS 349 >gi|70728449|ref|YP_258198.1| YjgP/YjgQ family permease [Pseudomonas fluorescens Pf-5] gi|68342748|gb|AAY90354.1| permease, YjgP/YjgQ family [Pseudomonas fluorescens Pf-5] Length = 372 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 60/347 (17%), Positives = 128/347 (36%), Gaps = 24/347 (6%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ R I + ++ I + ++ + +S L I G+ +P L ++ Sbjct: 5 RYLSREILLTLSAVSAVLLVIIMSGRFVKFLAQAASGALDPGSLFLIMGFRLPGFLQLIL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + + +E+ ++ TG S+ L+ + A L+++ + + P+ Sbjct: 65 PLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLLGMTMIPAALVALLVAWLSLSLAPQG 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYNPNNT-LQGIFIVDSR---- 179 + + L K F L F L+D + + + + T L G+FI + R Sbjct: 125 ANQFQLLLNKQDALTEFDTLVAGRFQALNDGTRVTYTEQLSEDRTNLGGVFISEKRLGQQ 184 Query: 180 -DTQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + + A+ G D + +IL +G + +P + ++K+ +Y + E + Sbjct: 185 KKDEGISVLVAEKGHQDIRPDGNRYLILENGYRYDGNPGEANYRVIKYDTYGVLLERPDV 244 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 S V + + L+ + R+E RL+ L I L+++ Sbjct: 245 SDEVTDRDAMPTADLIGKDD----------LRARAELQWRLSLPLLVFIVTLMAVP--LS 292 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 R RQ + + I L + + + + P L L+ Sbjct: 293 RVNPRQGRFLKLIPAIL--LYMAYLTILIAVRGALEKGKISPALGLW 337 >gi|262277384|ref|ZP_06055177.1| putative permease, YjgP/YjgQ family [alpha proteobacterium HIMB114] gi|262224487|gb|EEY74946.1| putative permease, YjgP/YjgQ family [alpha proteobacterium HIMB114] Length = 360 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 53/294 (18%), Positives = 115/294 (39%), Gaps = 12/294 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 Y + F++ L + + W Q + + LV+ +++ K + P +L Sbjct: 4 NKVYRYFFIEFFKLFILINLSLSLLIWFTQAARLLELVTDYGNPISVYAKYLLLIYPKIL 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 F + + + + EL I +G S+ + + +++ I+ I I Sbjct: 64 DNTFLLSFIISLFFLYSKFETDNELQIYWLSGISKFKIHQLCIYIGIVSLIINLSFSIFI 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + ++ L + ++E F L + + K N ++GIFI Sbjct: 124 APWSSYQGRMILGNSKFTLINAVVKEKNFNSPLKGLTVYVEKNNKQGNIEGIFIY----- 178 Query: 182 QTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN-SSTI 238 + + A+ G + D + + L +G K+ ++ +KF++ +T Sbjct: 179 EKTRTITAEKGEVLSDENGSYLKLINGTTQEKTGSK--VNFLKFQNTIFDFSKYQIKNTT 236 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFG-LISIV 291 K +++NL +L+N N + +E R E + R+ + +I LIS + Sbjct: 237 APKYSERNLYWLINNLDNKKISKARKIE-LREEINSRIIKPFMILILTSLISFL 289 >gi|26249548|ref|NP_755588.1| hypothetical protein c3717 [Escherichia coli CFT073] gi|170018761|ref|YP_001723715.1| permease YjgP/YjgQ family protein [Escherichia coli ATCC 8739] gi|254162934|ref|YP_003046042.1| hypothetical protein ECB_02856 [Escherichia coli B str. REL606] gi|300916913|ref|ZP_07133616.1| conserved hypothetical protein [Escherichia coli MS 115-1] gi|300923637|ref|ZP_07139665.1| hypothetical protein HMPREF9548_01830 [Escherichia coli MS 182-1] gi|300950816|ref|ZP_07164702.1| conserved hypothetical protein [Escherichia coli MS 116-1] gi|300958361|ref|ZP_07170502.1| hypothetical protein HMPREF9547_04075 [Escherichia coli MS 175-1] gi|301643654|ref|ZP_07243695.1| conserved hypothetical protein [Escherichia coli MS 146-1] gi|307139670|ref|ZP_07499026.1| hypothetical protein EcolH7_16283 [Escherichia coli H736] gi|312972759|ref|ZP_07786932.1| conserved hypothetical protein [Escherichia coli 1827-70] gi|331643681|ref|ZP_08344812.1| putative permease [Escherichia coli H736] gi|26109956|gb|AAN82161.1|AE016766_249 Hypothetical protein c3717 [Escherichia coli CFT073] gi|169753689|gb|ACA76388.1| permease YjgP/YjgQ family protein [Escherichia coli ATCC 8739] gi|242378536|emb|CAQ33322.1| ybl136 [Escherichia coli BL21(DE3)] gi|253974835|gb|ACT40506.1| conserved hypothetical protein [Escherichia coli B str. REL606] gi|253978990|gb|ACT44660.1| conserved hypothetical protein [Escherichia coli BL21(DE3)] gi|284923007|emb|CBG36099.1| putative permease [Escherichia coli 042] gi|300314945|gb|EFJ64729.1| hypothetical protein HMPREF9547_04075 [Escherichia coli MS 175-1] gi|300415883|gb|EFJ99193.1| conserved hypothetical protein [Escherichia coli MS 115-1] gi|300420078|gb|EFK03389.1| hypothetical protein HMPREF9548_01830 [Escherichia coli MS 182-1] gi|300449911|gb|EFK13531.1| conserved hypothetical protein [Escherichia coli MS 116-1] gi|301078038|gb|EFK92844.1| conserved hypothetical protein [Escherichia coli MS 146-1] gi|309703416|emb|CBJ02755.1| putative permease [Escherichia coli ETEC H10407] gi|310332701|gb|EFP99914.1| conserved hypothetical protein [Escherichia coli 1827-70] gi|323936015|gb|EGB32310.1| permease YjgP/YjgQ family protein [Escherichia coli E1520] gi|323941918|gb|EGB38097.1| permease YjgP/YjgQ family protein [Escherichia coli E482] gi|331037152|gb|EGI09376.1| putative permease [Escherichia coli H736] gi|332344939|gb|AEE58273.1| conserved hypothetical protein [Escherichia coli UMNK88] Length = 356 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 75/370 (20%), Positives = 138/370 (37%), Gaps = 32/370 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + +N L I + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIY-TS 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +I+ A+S + SP + + +Y + + + + + Sbjct: 180 TANRTRIFRARSVDVVD--------------PSPEKPTVMLHNGTAYLIDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLE----------TYRSEFHKRLTQWLFPVIFGLIS 289 +NL LNP +PN + + +E R ++ L + Sbjct: 226 Y----RNLQLHLNPLDQSPNVKRKAKSVTELARSVFPADHAELQWRQSRGLT--ALLMAL 279 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 + + R RQ + + ++L + G IP L+L + Sbjct: 280 LAISLSRVKPRQGRFSTLLPLTLLFIAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMG 339 Query: 350 FLLMIKKKYT 359 L+++ + ++ Sbjct: 340 LLMLVARDFS 349 >gi|323188590|gb|EFZ73875.1| hypothetical protein ECRN5871_3009 [Escherichia coli RN587/1] gi|324005417|gb|EGB74636.1| hypothetical protein HMPREF9532_04927 [Escherichia coli MS 57-2] Length = 356 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 76/370 (20%), Positives = 137/370 (37%), Gaps = 32/370 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYASVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + +N L I + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIY-TS 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +I+ A+S + SP + + +Y L + + + + Sbjct: 180 TANRTRIFRARSVDVVD--------------PSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLE----------TYRSEFHKRLTQWLFPVIFGLIS 289 +NL LNP +PN + + +E R ++ L + Sbjct: 226 Y----RNLQLHLNPLDQSPNVKRKAKSVTELARSVFPADHAELQWRQSRGLT--ALLMAL 279 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 + + R RQ + + ++L + G IP L+L + Sbjct: 280 LAISLSRVKPRQGRFSTLLPLTLLFVAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMG 339 Query: 350 FLLMIKKKYT 359 L+++ + ++ Sbjct: 340 LLMLVARDFS 349 >gi|91212394|ref|YP_542380.1| hypothetical protein UTI89_C3402 [Escherichia coli UTI89] gi|117625286|ref|YP_854458.1| putative permease [Escherichia coli APEC O1] gi|218560055|ref|YP_002392968.1| hypothetical protein ECS88_3362 [Escherichia coli S88] gi|218691271|ref|YP_002399483.1| hypothetical protein ECED1_3630 [Escherichia coli ED1a] gi|237706273|ref|ZP_04536754.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|91073968|gb|ABE08849.1| hypothetical protein UTI89_C3402 [Escherichia coli UTI89] gi|115514410|gb|ABJ02485.1| putative permease [Escherichia coli APEC O1] gi|218366824|emb|CAR04594.1| conserved hypothetical protein; putative membrane protein [Escherichia coli S88] gi|218428835|emb|CAR09636.1| conserved hypothetical protein; putative membrane protein [Escherichia coli ED1a] gi|226899313|gb|EEH85572.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|294492595|gb|ADE91351.1| putative permease, YjgP/YjgQ family [Escherichia coli IHE3034] gi|307625416|gb|ADN69720.1| hypothetical protein UM146_01455 [Escherichia coli UM146] gi|315288787|gb|EFU48185.1| conserved hypothetical protein [Escherichia coli MS 110-3] gi|323951497|gb|EGB47372.1| permease YjgP/YjgQ family protein [Escherichia coli H252] gi|323957869|gb|EGB53583.1| permease YjgP/YjgQ family protein [Escherichia coli H263] Length = 356 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 76/370 (20%), Positives = 137/370 (37%), Gaps = 32/370 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYASVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + +N L I + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIY-TS 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +I+ A+S + SP + + +Y L + + + + Sbjct: 180 TANRTRIFRARSVDVVD--------------PSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLE----------TYRSEFHKRLTQWLFPVIFGLIS 289 +NL LNP +PN + + +E R ++ L + Sbjct: 226 Y----RNLQLHLNPLDQSPNVKRKAKSVTELARSVFPADHAELQWRQSRGLT--ALLMAL 279 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 + + R RQ + + ++L + G IP L+L + Sbjct: 280 LAISLSRVKPRQGRFSTLLPLTLLFVAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMG 339 Query: 350 FLLMIKKKYT 359 L+++ + ++ Sbjct: 340 LLMLVARDFS 349 >gi|323496138|ref|ZP_08101198.1| hypothetical protein VISI1226_19659 [Vibrio sinaloensis DSM 21326] gi|323318882|gb|EGA71833.1| hypothetical protein VISI1226_19659 [Vibrio sinaloensis DSM 21326] Length = 366 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 52/355 (14%), Positives = 123/355 (34%), Gaps = 19/355 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ + ++ + + ++L I G IP + Sbjct: 2 IIVRYLIRETLKSQLAIFFVLLLVFISQTFIKVLGDATDGDIPARLILAIVGLNIPQMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ + LA + + + + Sbjct: 62 LMLPMSLYLGILLTFGRLYSESEITVMNATGMGSKFLIRAAMSLAFITTALAAFNTLYLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RD 180 P + QL + + L+ F R D + +N L +F+ RD Sbjct: 122 PWSQEREAQLIEQVAAESSVDLLKAGQFQRTPDGSSVVFIDSIKDNQLNNVFVAQLRPRD 181 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + ++ SG + RQ I+++DG + P D + +F+ Y+ Sbjct: 182 AILPSVMFSNSGEVKEHSDGRQMIVMHDGTRYEGIPTRLDYMVTEFEQYSGLIGQREVEA 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 L+ + + ++E R++ + L++++ A Sbjct: 242 KRRGWGAVPTLDLIESSDLSA----------KAELQWRISL-FVCI--PLLTMLVVPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFL 351 + ++ + + ++ F F S IE I ++ F + + Sbjct: 289 VNPRQGRFAKMGPAILAYFVYFISISTTKSAIEDGNIPAAIGMWPINFALLVAAI 343 >gi|255020899|ref|ZP_05292955.1| Predicted permease [Acidithiobacillus caldus ATCC 51756] gi|254969690|gb|EET27196.1| Predicted permease [Acidithiobacillus caldus ATCC 51756] Length = 372 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 65/366 (17%), Positives = 138/366 (37%), Gaps = 18/366 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M ILR + R F+ CL ++ I + Q+ Q ++ V+S L + L++ G PT+ Sbjct: 1 MSRIHARILRDLLRVFVFGCLLVLGILAIGQLSQLLSQVASGQLPLGVTLQLLGLATPTL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V P F V +++ R+ E++ I + G S + L++ + +++++ + Sbjct: 61 LVTVLPLAFFFALYLVFSNLYRSNEMMAIRSAGLSLLDLLRALALPILVIALLEALLSLS 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN--NTLQGIFIVDS 178 P + ++ S + A + ++ F R+ + + + P + + IF+ D Sbjct: 121 WSPAAQRQLQAESLRLANAAAEALIQPGSFARIAGGHILYVGQSAPGSEHRYREIFV-DL 179 Query: 179 RDTQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 I A G I D+ ++L G + P + I+ F Y + + Sbjct: 180 GGKGEPDIATAAFGEIRKDQDGGIALVLIQGHRYLGQPGTAGFKILSFVHYRIALAAPQG 239 Query: 236 STIVLKANDQNLSF--LLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 S +DQ + + L P P +E RL L + L++I A Sbjct: 240 S------SDQGIHWAALDLPQVLQALREPRYARHALAELEWRLIWPLLIPVLALLAIPLA 293 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFL 351 R + + + ++ I + + + ++ L + Sbjct: 294 FGGP--RGAGRASGALLGILTLLAANNLLVFLKEGIIQGRIGGFPGLFWVLLLLGALAAY 351 Query: 352 LMIKKK 357 +++ Sbjct: 352 AFWRRQ 357 >gi|147673657|ref|YP_001217998.1| hypothetical protein VC0395_A2082 [Vibrio cholerae O395] gi|262167531|ref|ZP_06035236.1| predicted permease [Vibrio cholerae RC27] gi|146315540|gb|ABQ20079.1| putative membrane protein [Vibrio cholerae O395] gi|227014390|gb|ACP10600.1| putative membrane protein [Vibrio cholerae O395] gi|262023984|gb|EEY42680.1| predicted permease [Vibrio cholerae RC27] Length = 366 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 56/347 (16%), Positives = 120/347 (34%), Gaps = 19/347 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + ++ + VS +++L I G +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADVSDGEIPTSMILSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LA++ + + + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RD 180 P + L + + L++ F R D + N L +F+ RD Sbjct: 122 PWSQDKEAHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLYNVFVAQLAPRD 181 Query: 181 TQTHKIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + ++ SG + RQ I L DG + P D I F SY + Sbjct: 182 SILPSVMFSHSGDVKELSDGRQIITLYDGTRYEGVPTRVDYMITNFDSYDGLIGQREVKS 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 LLN ++E R++ V L++++ A Sbjct: 242 AERDWEALPTLSLLN----------NADRRAQAELQWRIS---LVVCIPLLTMLVVPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 + ++ + + ++ I F S ++ I+ L+ Sbjct: 289 VNPRQGRFAKMGPAILIYLTYFLALS-ATKSAIEDGSLPVIIGLWPI 334 >gi|24114288|ref|NP_708798.1| hypothetical protein SF3027 [Shigella flexneri 2a str. 301] gi|30064335|ref|NP_838506.1| hypothetical protein S3228 [Shigella flexneri 2a str. 2457T] gi|24053444|gb|AAN44505.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|30042592|gb|AAP18316.1| hypothetical protein S3228 [Shigella flexneri 2a str. 2457T] gi|281602371|gb|ADA75355.1| putative permease [Shigella flexneri 2002017] gi|313648098|gb|EFS12544.1| hypothetical protein SF2457T_3698 [Shigella flexneri 2a str. 2457T] gi|332752656|gb|EGJ83041.1| hypothetical protein SFK671_3614 [Shigella flexneri K-671] gi|332753042|gb|EGJ83426.1| hypothetical protein SF434370_3221 [Shigella flexneri 4343-70] gi|332765462|gb|EGJ95680.1| hypothetical protein SF293071_3544 [Shigella flexneri 2930-71] gi|332999939|gb|EGK19522.1| hypothetical protein SFK218_4003 [Shigella flexneri K-218] gi|333014895|gb|EGK34240.1| hypothetical protein SFK304_3820 [Shigella flexneri K-304] Length = 356 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 78/370 (21%), Positives = 140/370 (37%), Gaps = 32/370 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + +N L I + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIY-TS 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +I+ A GS+D+ SP + + +Y L + + + + Sbjct: 180 TANRTRIFRA--GSVDVVDP------------SPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLE----------TYRSEFHKRLTQWLFPVIFGLIS 289 +NL LNP +PN + + +E R ++ L + Sbjct: 226 Y----RNLQLHLNPLDQSPNVKRKAKSVTELARSAFPADHAELQWRQSRGLT--ALLMAL 279 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 + + R RQ + + ++L + G IP L+L + Sbjct: 280 LAISLSRVKPRQGRFSTLLPLTLLFIAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMG 339 Query: 350 FLLMIKKKYT 359 L+++ + ++ Sbjct: 340 LLILVARDFS 349 >gi|300905893|ref|ZP_07123626.1| hypothetical protein HMPREF9536_03885 [Escherichia coli MS 84-1] gi|301304161|ref|ZP_07210277.1| hypothetical protein HMPREF9347_02761 [Escherichia coli MS 124-1] gi|307310385|ref|ZP_07590033.1| permease YjgP/YjgQ family protein [Escherichia coli W] gi|300402362|gb|EFJ85900.1| hypothetical protein HMPREF9536_03885 [Escherichia coli MS 84-1] gi|300840574|gb|EFK68334.1| hypothetical protein HMPREF9347_02761 [Escherichia coli MS 124-1] gi|306909280|gb|EFN39775.1| permease YjgP/YjgQ family protein [Escherichia coli W] gi|315062299|gb|ADT76626.1| permease YjgP/YjgQ family protein [Escherichia coli W] gi|315256879|gb|EFU36847.1| putative permease [Escherichia coli MS 85-1] gi|323377116|gb|ADX49384.1| permease YjgP/YjgQ family protein [Escherichia coli KO11] Length = 356 Score = 151 bits (382), Expect = 2e-34, Method: Composition-based stats. Identities = 76/370 (20%), Positives = 138/370 (37%), Gaps = 32/370 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + +N L I + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIY-TS 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +I+ A+S + SP + + +Y L + + + + Sbjct: 180 TANRTRIFRARSVDVVD--------------PSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLE----------TYRSEFHKRLTQWLFPVIFGLIS 289 +NL LNP +PN + + +E R ++ L + Sbjct: 226 Y----RNLQLHLNPLVQSPNVKRKAKSVTELARSVFPADHAELQWRQSRGLT--ALLMAL 279 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 + + R RQ + + ++L + G IP L+L + Sbjct: 280 LAISLSRVKPRQGRFSTLLPLTLLFIAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMG 339 Query: 350 FLLMIKKKYT 359 L+++ + ++ Sbjct: 340 LLMLVARDFS 349 >gi|307294585|ref|ZP_07574427.1| permease YjgP/YjgQ family protein [Sphingobium chlorophenolicum L-1] gi|306879059|gb|EFN10277.1| permease YjgP/YjgQ family protein [Sphingobium chlorophenolicum L-1] Length = 406 Score = 151 bits (382), Expect = 2e-34, Method: Composition-based stats. Identities = 61/362 (16%), Positives = 134/362 (37%), Gaps = 18/362 (4%) Query: 5 ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 + Y+ R I L + + + + ++L + V++ ++++ ++ ++P L + Sbjct: 6 DRYLARLIALPMLGTLVISAMLLVLDKMLSLFDFVAAEGGPVSVVWRMLANMMPEYLSLG 65 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P + + ++EL ++ G S L++ AI L++ F ++P Sbjct: 66 IPIGLMLGILLAFRKLAMSSELDVMRAVGLSYGRLLRVPYMYAIALALLNFGIVGFVQPL 125 Query: 125 CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKI-SKYNPNNTLQGIFIVDSRDTQT 183 R + L + + + ++ F L + ++I + LQGIF+ Sbjct: 126 SRHAYEALRFELRSGALGASIKVGEFTNLGKRMTLRIERSLDEGRNLQGIFVRAMGKDGQ 185 Query: 184 HKIYYAQSGSI----DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 A G D D L DG + +P K I+ F S+ L + Sbjct: 186 TVAVTAAQGEFLATDDPDTIIFRLRDGVLVNDAPKYKSPRILSFSSHDLPIDLPQIEKFR 245 Query: 240 LKANDQNLSF-LLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + D+ + L ++P +L R+ FH R+ + + ++ + A Sbjct: 246 GRDVDREKTIPELVMIGHDPGTPDKLRNEIRANFHFRMVE-----VAMMLLLPLAALAFA 300 Query: 299 VRQRKKIHPIFISLSISFGVFWG-----FSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + ++ + + LSI F V + + + +P I L+ + + L M Sbjct: 301 IPPKRSTSALGVFLSIVFIVTYHKVNEYGQGVGSLGKIDP--IIALWGPFLLFAGLILWM 358 Query: 354 IK 355 Sbjct: 359 YH 360 >gi|258622808|ref|ZP_05717826.1| conserved hypothetical protein [Vibrio mimicus VM573] gi|258584996|gb|EEW09727.1| conserved hypothetical protein [Vibrio mimicus VM573] Length = 366 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 58/364 (15%), Positives = 125/364 (34%), Gaps = 19/364 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + ++ + S +++L I G +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASDGEIPTSMILSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LA++ + + + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAGFNALWLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RD 180 P + QL + + L++ F R D + N L +F+ RD Sbjct: 122 PWSQDKEAQLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLHNVFVAQLAPRD 181 Query: 181 TQTHKIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + ++ SG + RQ I L +G + P D I F SY + Sbjct: 182 SILPSVMFSNSGDVKELSDGRQIITLYNGTRYEGVPTRVDYMITNFDSYDGLIGQREVKS 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 LL ++E RL+ V L++++ A Sbjct: 242 SGRDWEALPTLSLL----------KNSDLQAQAELQWRLS---LVVCIPLLTMLVVPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ + + ++ I F S ++ I+ L+ + +F +I Sbjct: 289 VNPRQGRFAKMGPAILIYLTYFLALS-ATKSAIEDGSLPVIIGLWPVNAALLFAALIVNT 347 Query: 358 YTKI 361 I Sbjct: 348 MDSI 351 >gi|145631588|ref|ZP_01787354.1| predicted permease [Haemophilus influenzae R3021] gi|144982788|gb|EDJ90314.1| predicted permease [Haemophilus influenzae R3021] Length = 367 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 47/356 (13%), Positives = 127/356 (35%), Gaps = 17/356 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + +S + L ++ I + Q ++ + ++ +++ + G +PT+ Sbjct: 2 ILIRYLIKEVFKSQIAILLILLLIFFSQQFVRVLGAAANGNVPADLVFSLLGLGMPTMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P C + + +E+ ++ G + L+K L +++L + + + Sbjct: 62 LMLPLCLFIAILLTFGRLYAESEITVMRACGVGQRILVKVALIMSLLTAGIAAYNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RD 180 P + A+ T L F +++ + +N ++ +++ + Sbjct: 122 PWAIQKQVNMVEDAKANPTVGVLSSGQFISTNNNNVVLFIDKIKDNQIRNVYLFQMTPQK 181 Query: 181 TQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G + Q + L + + + + D I F Y + Sbjct: 182 QTKPSVVTAEKGELIALPNGDQVLNLKNTKRVEGTSVLPDFRITHFDEYRAYLGYQAAEN 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +A + LS L++ + ++ ++E H R+T L + LI++ R Sbjct: 242 TNDEAAELTLSQLIDLDSSSA----------KAELHWRITLILAVPLMALIAVP--LSRV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 RQ + + L S+ ++ L + +++ Sbjct: 290 NPRQGRFAKILPALLLYLIYFLLQSSFKSAGAAGKLEAELLMPLVNIGFFLLAVVL 345 >gi|254251665|ref|ZP_04944983.1| hypothetical protein BDAG_00857 [Burkholderia dolosa AUO158] gi|124894274|gb|EAY68154.1| hypothetical protein BDAG_00857 [Burkholderia dolosa AUO158] Length = 364 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 62/366 (16%), Positives = 139/366 (37%), Gaps = 24/366 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ I +++ + +S +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTIMLTTMMIRIVGYAASGEVDPKDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT R++E+++ +G S LIKP+ A + + + + Sbjct: 62 VMLVVTLFVSILFVLTRWYRDSEMVVWLASGVSLTRLIKPIGVFATPIIVLIAFFAFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNT-LQGIFIVDSRD 180 P K + A+ Q S L F + I K P+ + +Q +F+ + + Sbjct: 122 PWSNQQSKMIKARFQQRDEISLLAPGQFRESAANHRVFFIEKMTPDQSKVQNVFVTSTEN 181 Query: 181 TQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + +Q+G + + ++L DG + +P + IM+F+ Y ++ S Sbjct: 182 GKV-NVVVSQTGHTETSKDGDRFVVLEDGRRYDGTPGQPNFKIMEFERYGVKITSKPIVN 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + L L NP +N +EF R L + ++ I A Sbjct: 241 VPTTSGTPTLELLRNPTRDNL-----------AEFAWRAGLPLIAINLMVLGIPLA--YQ 287 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI----LYLFLFCISSIFLLM 353 R+ + I+ + +++ I + + +IEQ + L++ + I + + Sbjct: 288 NPRRSRTIN-LVMAVLIYLTYSNLLNVVQAQIEQGKMSFGVGLVGLHVIVAAIVAFIFWL 346 Query: 354 IKKKYT 359 + Sbjct: 347 RVRNRP 352 >gi|294012648|ref|YP_003546108.1| putative permease [Sphingobium japonicum UT26S] gi|292675978|dbj|BAI97496.1| putative permease [Sphingobium japonicum UT26S] Length = 407 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 60/363 (16%), Positives = 134/363 (36%), Gaps = 20/363 (5%) Query: 5 ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 + Y+ R I L + + + + ++L + V++ ++++ ++ ++P L + Sbjct: 6 DRYLARLIALPMLGTLVISAMLLVLDKMLSLFDFVAAEGGPVSVVWRMLANMMPEYLSLG 65 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P + + ++EL ++ G S L++ AI L++ F ++P Sbjct: 66 IPIGLMLGILLAFRKLALSSELDVMRAVGLSYGRLLRVPYMFAIALALLNFGIVGFVQPL 125 Query: 125 CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKI-SKYNPNNTLQGIFIVDSRDTQT 183 R + L + + + ++ F L + ++I + LQGIF+ Sbjct: 126 SRHAYEALRFELRSGALGASIKVGEFTNLGKRMTLRIERSLDEGRNLQGIFVRAVGKDGQ 185 Query: 184 HKIYYAQSGSI----DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 A G D D L DG + +P K I+ F S+ L + Sbjct: 186 TVAVTAAQGEFLATDDPDTIIFRLRDGVLVNDAPKYKSPRILSFSSHDLPIDLPQIERFR 245 Query: 240 LKA--NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ + L+ ++P +L R+ FH R+ + + ++ + A Sbjct: 246 GRDVDREKTIPELVTIG-HDPATPEKLRNEIRANFHFRMVE-----VAMMLLLPLAALAF 299 Query: 298 LVRQRKKIHPIFISLSISFGVFWG-----FSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 + ++ + + LSI F V + + +P I L+ + + L Sbjct: 300 AIPPKRSTSALGVFLSIVFIVTYHKVNEYGQGVGSLGRIDP--IIALWGPFLLFAGLILW 357 Query: 353 MIK 355 M Sbjct: 358 MYH 360 >gi|103487657|ref|YP_617218.1| permease YjgP/YjgQ [Sphingopyxis alaskensis RB2256] gi|98977734|gb|ABF53885.1| permease YjgP/YjgQ [Sphingopyxis alaskensis RB2256] Length = 402 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 57/356 (16%), Positives = 133/356 (37%), Gaps = 9/356 (2%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI R I + + + + + ++L+ + V++ ++++ ++ LIP L + Sbjct: 7 IDRYIARLIFFPMVGTLVLSAMLLVLEKMLRLFDFVATEGGPVSVVWRMLANLIPEYLSL 66 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + + ++EL ++ G S L++ A+ L+ I+P Sbjct: 67 GIPIGLMLGILLAFRRLATSSELDVLKGVGMSFGRLMRMPYVYAVGLAALNLAIVGFIQP 126 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISK-YNPNNTLQGIFIVDSRDTQ 182 R + L + + + ++ F RL + + ++I + YN +L+GIF+ + Sbjct: 127 YARYAYEGLQFELRSGALGASIKVGEFTRLGERMTLRIEESYNEGRSLRGIFVRGEQRDG 186 Query: 183 THKIYYAQSGSI----DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 A G D + + L+ G + +SP ++ F ++ L Sbjct: 187 QRVSATASRGQFLATDDPETIILRLSQGVLIHESPKFAVPRVLTFDNHDLPIPLPRIEAF 246 Query: 239 VLK---ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 L+ + + L + LE+ R+ FH R+ + + + LI++ A Sbjct: 247 RLRGGADREMTIPELFVAGKDRRQSEQTRLES-RANFHFRIVEVMSMFLIPLIAVALAVP 305 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + + L + + + +P + LF +I++ Sbjct: 306 PKRSTSSLGVFLSIVLLVTQHKINQYAEDLGARGAVDPLIALWVPFLLFAALAIWM 361 >gi|294637821|ref|ZP_06716093.1| inner membrane protein YjgP [Edwardsiella tarda ATCC 23685] gi|291089020|gb|EFE21581.1| inner membrane protein YjgP [Edwardsiella tarda ATCC 23685] Length = 366 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 56/348 (16%), Positives = 132/348 (37%), Gaps = 25/348 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + V + N++ + G IP + Sbjct: 2 IIIRYLVRETFKSQVAILFILLLIFFCQKMVRILGAVVNGDIPTNLVFSLLGLGIPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G + LIK + LA + + Sbjct: 62 LILPLSLFLGLLMTLGRLYTESEITVMHACGLGKSVLIKAAMVLAFFTGALALANAFWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD-- 180 P ++ A+A+ + L E F D Y+ + +F+ R Sbjct: 122 PWSSLHSDEVMAEAKANPGLASLAEGQFQPSQDGNYVLFVGNVKDKKFHDVFLAQLRPSG 181 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 +Q + A SG + Q ++L+ G + + + +D I F Y+ ++ Sbjct: 182 SQRPSVVVADSGHLVEMKDGGQKVVLDSGTRYEGTAMLRDFRITDFVDYSALIGHKSTML 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 A+ ++S L + + + +R+EFH RLT ++ L+ + Sbjct: 242 DPNNADQASMSALWHSDEPS----------FRAEFHWRLTLVFSVLVMALMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLF 342 RQ + +S+ + ++ F + + N P+++++ Sbjct: 290 NPRQGR-----VLSMLPAMLLYLIFFLLQSSLRSNGGKGKLDPMIWMW 332 >gi|157156628|ref|YP_001464444.1| YjgP/YjgQ permease [Escherichia coli E24377A] gi|256019096|ref|ZP_05432961.1| hypothetical protein ShiD9_09279 [Shigella sp. D9] gi|332280199|ref|ZP_08392612.1| YjgP/YjgQ permease [Shigella sp. D9] gi|157078658|gb|ABV18366.1| putative permease, YjgP/YjgQ family [Escherichia coli E24377A] gi|332102551|gb|EGJ05897.1| YjgP/YjgQ permease [Shigella sp. D9] Length = 356 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 72/363 (19%), Positives = 140/363 (38%), Gaps = 18/363 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + + N L I + Sbjct: 121 GRPWAYTQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIY-TS 179 Query: 180 DTQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 +I+ A+S + ++ ++L++G + +D + +++ L + + S Sbjct: 180 TANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLKPLDQS 239 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + + P + +E R ++ L + + + R Sbjct: 240 PNVKRKAKSVTELARSAFPAD-----------HAELQWRQSRGLT--ALLMALLAISLSR 286 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 RQ + + ++L + G IP L+L + L+++ + Sbjct: 287 IKPRQGRFSTLLPLTLLFIAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMGLLMLVAR 346 Query: 357 KYT 359 ++ Sbjct: 347 DFS 349 >gi|329118130|ref|ZP_08246842.1| YjgP/YjgQ family permease [Neisseria bacilliformis ATCC BAA-1200] gi|327465790|gb|EGF12063.1| YjgP/YjgQ family permease [Neisseria bacilliformis ATCC BAA-1200] Length = 431 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 48/347 (13%), Positives = 128/347 (36%), Gaps = 21/347 (6%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 ++ + + + + I+ + Q + + + + + + + G+ + P++ Sbjct: 74 FIKELTYTAVGIFVVILAVLVSTQAVNLLGRAADGRVAADAVAALIGFWTLGMTPLLLVL 133 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 + VLT R++E+ + + G S ++PVL A+ + + + + P Sbjct: 134 TAYISVLTVLTRFWRDSEMAVWLSCGLSLKQWLRPVLAFALPFAALVAAMQLAVLPWAEL 193 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLD--DDLYIKISKYN-PNNTLQGIFIVDSRDTQTH 184 ++ + + S +E F L + + ++ + ++ +F+ + D Sbjct: 194 RSREFAELLKQKQELSLVEAGEFRTLGKRNGRVYFVETFDTESGVMKNLFLREQDDKGRE 253 Query: 185 KIYYAQSGSIDLD--RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE-SANSSTIVLK 241 + +A+ G L ++ + L G + P D + + F+ +L + V Sbjct: 254 NVVFAKEGRFALTDHKRTLELTQGYRYGGIPGEADYNRVGFEHLSLVISTTPKIVNPVDH 313 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + L+ + YR+E R++ L VI ++I+A + Sbjct: 314 RRTIPTARLIGSDNP----------QYRAELMWRVSLPLAAVI---LAILAVPLSYFNPR 360 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIE--QNPYYIPILYLFLFCI 346 + I ++ G + + + IE + ++ L L + + Sbjct: 361 TGHTYNILFAIGFFLVYQNGLTLLRNAIENGKIGFWAGFLPLHILML 407 >gi|114776266|ref|ZP_01451311.1| hypothetical protein SPV1_01062 [Mariprofundus ferrooxydans PV-1] gi|114553096|gb|EAU55494.1| hypothetical protein SPV1_01062 [Mariprofundus ferrooxydans PV-1] Length = 386 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 53/358 (14%), Positives = 140/358 (39%), Gaps = 14/358 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + + Y+LR F +F++ + + + L+ + VS + E+ ++++ + +P L Sbjct: 2 TLDRYMLRLWLGPFFGGLVFVLAVMLLARALKLLGTVSDTAEAWSLIVDLLALTMPFFLL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P F + N +T + +++E+ ++ +G S + + + LL + L + Sbjct: 62 QIVPMAFFLSLQNTITGLQQSSEMDVLRGSGLSYGRMFRVFFIVVPLLWLGLTYIAMVQL 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P+ + + AK F R D + + + + T G+ + D R Sbjct: 122 PQGQLGFNNILAKIYAMKGAISFAPQRFTRGLDGITVYVDGEDSEGTYHGLILEDHR-GG 180 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 IY A+S D+ + ++L + R D ++ F Y + + +L + Sbjct: 181 VSVIYTAKSARFDMGGEYLLLKLKDGVRLEGEGADQRMLAFDRYQVSIALPAGNRKILHS 240 Query: 243 ND----QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 ND + L + N+ + +E+++RL ++ ++ + Sbjct: 241 NDHVTMMTVPELWHAMHNSQS------GAAVAEWNRRLLMPTTTLVLLFFALPLSL---T 291 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 ++ K + +++ V+ + ++ Q + +++ + + + K+ Sbjct: 292 QKRSGKAGSMIGGIALLVMVYNLQLLLYQQVNQGGFPGWSMWMGQALLLFTGMFLSKR 349 >gi|262401791|ref|ZP_06078356.1| predicted permease [Vibrio sp. RC586] gi|262351763|gb|EEZ00894.1| predicted permease [Vibrio sp. RC586] Length = 366 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 59/364 (16%), Positives = 126/364 (34%), Gaps = 19/364 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + ++ + S +++L I G +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASDGEIPTSMILSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LA++ + + + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAGFNALWLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RD 180 P + QL + + L++ F R D + N L +F+ RD Sbjct: 122 PWSQDKEAQLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLHNVFVAQLAPRD 181 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + ++ SG++ RQ I L DG + P D I F SY + Sbjct: 182 SVLPSVMFSNSGAVKELSDGRQIITLYDGTRYEGVPTRVDYMITNFDSYDGLIGQREVKS 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 LL ++E RL+ V L++++ A Sbjct: 242 TGRDWEALPTLSLL----------KNSDLQAQAELQWRLS---LVVCIPLLTMLVVPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ + + ++ I F S ++ I+ L+ + +F +I Sbjct: 289 VNPRQGRFAKMGPAILIYLTYFLTLS-ATKSAIEDGSLPVIIGLWPVNAALLFAALIVNT 347 Query: 358 YTKI 361 I Sbjct: 348 MDSI 351 >gi|260582802|ref|ZP_05850588.1| permease [Haemophilus influenzae NT127] gi|260094128|gb|EEW78030.1| permease [Haemophilus influenzae NT127] gi|309972900|gb|ADO96101.1| Lipopolysaccharide export permease, LptF [Haemophilus influenzae R2846] Length = 367 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 46/356 (12%), Positives = 126/356 (35%), Gaps = 17/356 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + +S + L ++ I + Q ++ + ++ +++ + G +PT+ Sbjct: 2 ILIRYLIKEVFKSQIAILLILLLIFFSQQFVRVLGAAANGNVPADLVFSLLGLGMPTMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P C + + +E+ ++ G + L+K L +++L + + + Sbjct: 62 LMLPLCLFIAILLTFGRLYAESEITVMRACGVGQRILVKVALIMSLLTAGIAAYNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RD 180 P + A+ T L F +++ + +N ++ +++ + Sbjct: 122 PWAIQKQVNMVEDAKANPTVGVLSSGQFISTNNNNVVLFIDKIKDNQIRNVYLFQMTPQK 181 Query: 181 TQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G + Q + L + + + D I F Y ++ Sbjct: 182 QTKPSVITAEKGELIALPNGDQVLNLKNTKRVEGTSALPDFRITHFDEYQAYLGYQSAEN 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + LS L++ + ++ ++E H R+T L + LI++ R Sbjct: 242 TNDEVAELTLSQLIDLDSSSA----------KAELHWRITLILAVPLMALIAVP--LSRV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 RQ + + L S+ ++ L + +++ Sbjct: 290 NPRQGRFAKILPALLLYLIYFLLQSSFKSAGSAGKLEAELLMPLVNIGFFLLAVVL 345 >gi|260845740|ref|YP_003223518.1| hypothetical protein ECO103_3664 [Escherichia coli O103:H2 str. 12009] gi|257760887|dbj|BAI32384.1| conserved predicted membrane protein [Escherichia coli O103:H2 str. 12009] Length = 356 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 76/370 (20%), Positives = 137/370 (37%), Gaps = 32/370 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L ++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALYVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + +N L I + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIY-TS 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +I+ A+S + SP + + +Y L + + + + Sbjct: 180 TANRTRIFRARSVDVVD--------------PSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLE----------TYRSEFHKRLTQWLFPVIFGLIS 289 +NL LNP +PN + + +E R ++ L + Sbjct: 226 Y----RNLQLHLNPLDQSPNVKRKAKSVTELARSVFPADHAELQWRQSRGLT--ALLMAL 279 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 + + R RQ + + ++L + G IP L+L + Sbjct: 280 LAISLSRVKPRQGRFSTLLPLTLLFIAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMG 339 Query: 350 FLLMIKKKYT 359 L+++ + ++ Sbjct: 340 LLMLVARDFS 349 >gi|222034703|emb|CAP77445.1| hypothetical protein LF82_488 [Escherichia coli LF82] gi|312947541|gb|ADR28368.1| hypothetical protein NRG857_14790 [Escherichia coli O83:H1 str. NRG 857C] Length = 356 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 76/370 (20%), Positives = 137/370 (37%), Gaps = 32/370 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYASVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + +N L I + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIY-TS 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +I+ A+S + SP + + +Y L + + + + Sbjct: 180 TANRTRIFRARSVDVVD--------------PSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLE----------TYRSEFHKRLTQWLFPVIFGLIS 289 +NL LNP +PN + + +E R ++ L + Sbjct: 226 Y----RNLQLHLNPLDQSPNVKRKAKSVTELARSAFPADHAELQWRQSRGLT--ALLMAL 279 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 + + R RQ + + ++L + G IP L+L + Sbjct: 280 LAISLSRVKPRQGRFSTLLPLTLLFIAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMG 339 Query: 350 FLLMIKKKYT 359 L+++ + ++ Sbjct: 340 LLMLVARDFS 349 >gi|220935307|ref|YP_002514206.1| permease YjgP/YjgQ family protein [Thioalkalivibrio sp. HL-EbGR7] gi|219996617|gb|ACL73219.1| permease YjgP/YjgQ family protein [Thioalkalivibrio sp. HL-EbGR7] Length = 367 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 50/349 (14%), Positives = 130/349 (37%), Gaps = 23/349 (6%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 Y++R + + L ++ I + + + + ++LL + L Sbjct: 4 SILTRYLVREVLLTQAAVTLVLLLIIVGGTVARMLREAAEGRIPADVLLPMVALGSVRGL 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 ++ P + L + +++E+ + G L + + ++ + L + L + Sbjct: 64 ILLLPVSLFLALMLSLGRLYKDSEMAAMKACGVGPEQLYRAIAWMTVPLLVMLTVLVFWG 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRL-DDDLYIKISKYNPNN-TLQGIFIVDSR 179 P I Q+ A+ + F I + T++G+FI SR Sbjct: 124 SPLASQGIDQIRIDAEQRSDLVGIAPGRFTESRATGQVFFIEGLAGDGNTMRGVFIR-SR 182 Query: 180 DTQTHKIYYAQSGSIDLD----RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + ++ A+ G +D ++ ++L+DG +R +P S++ I+ F+++ L+ Sbjct: 183 GPEGDEVVTARRGETRVDPLTGQRYLVLHDGYRYRGAPGSQEFHILAFETHGLRVPDPTG 242 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 ST K + + + L ++R+E H R+ + + L ++ Sbjct: 243 STRRGKVDSLSTAELWQ----------STNLSHRAELHWRIAMPVS--MVLLAALALPLS 290 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHK---IEQNPYYIPILYL 341 + + + ++ + ++ F + Q P ++ + ++ Sbjct: 291 HTSNPRSGRFGKLTAAIGVYI-LYANFLILSKSWFASGQTPAWLGMWWV 338 >gi|68250307|ref|YP_249419.1| permease [Haemophilus influenzae 86-028NP] gi|145633639|ref|ZP_01789366.1| molybdate ABC transporter permease protein [Haemophilus influenzae 3655] gi|145639139|ref|ZP_01794746.1| predicted permease [Haemophilus influenzae PittII] gi|148825753|ref|YP_001290506.1| permease [Haemophilus influenzae PittEE] gi|229847325|ref|ZP_04467427.1| predicted permease [Haemophilus influenzae 7P49H1] gi|260581045|ref|ZP_05848867.1| permease [Haemophilus influenzae RdAW] gi|68058506|gb|AAX88759.1| predicted permease [Haemophilus influenzae 86-028NP] gi|144985516|gb|EDJ92332.1| molybdate ABC transporter permease protein [Haemophilus influenzae 3655] gi|145271701|gb|EDK11611.1| predicted permease [Haemophilus influenzae PittII] gi|148715913|gb|ABQ98123.1| predicted permease [Haemophilus influenzae PittEE] gi|229809750|gb|EEP45474.1| predicted permease [Haemophilus influenzae 7P49H1] gi|260092285|gb|EEW76226.1| permease [Haemophilus influenzae RdAW] gi|301170459|emb|CBW30066.1| conserved inner membrane protein [Haemophilus influenzae 10810] gi|309750720|gb|ADO80704.1| Lipopolysaccharide export permease, LptF [Haemophilus influenzae R2866] Length = 367 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 46/356 (12%), Positives = 126/356 (35%), Gaps = 17/356 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + +S + L ++ I + Q ++ + ++ +++ + G +PT+ Sbjct: 2 ILIRYLIKEVFKSQIAILLILLLIFFSQQFVRVLGAAANGNVPADLVFSLLGLGMPTMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P C + + +E+ ++ G + L+K L +++L + + + Sbjct: 62 LMLPLCLFIAILLTFGRLYAESEITVMRACGVGQRILVKVALIMSLLTAGIAAYNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RD 180 P + A+ T L F +++ + +N ++ +++ + Sbjct: 122 PWAIQKQVNMVEDAKANPTVGVLSSGQFISTNNNNVVLFIDKIKDNQIRNVYLFQMTPQK 181 Query: 181 TQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G + Q + L + + + D I F Y ++ Sbjct: 182 QTKPSVITAEKGELIALPNGDQVLNLKNTKRVEGTSALPDFRITHFDEYHAYLGYQSAEN 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + LS L++ + ++ ++E H R+T L + LI++ R Sbjct: 242 TNDEVAELTLSQLIDLDSSSA----------KAELHWRITLILAVPLMALIAVP--LSRV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 RQ + + L S+ ++ L + +++ Sbjct: 290 NPRQGRFAKILPALLLYLIYFLLQSSFKSAGSAGKLEAELLMPLVNIGFFLLAVVL 345 >gi|217967689|ref|YP_002353195.1| permease YjgP/YjgQ family protein [Dictyoglomus turgidum DSM 6724] gi|217336788|gb|ACK42581.1| permease YjgP/YjgQ family protein [Dictyoglomus turgidum DSM 6724] Length = 356 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 65/360 (18%), Positives = 133/360 (36%), Gaps = 6/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y L+ F + L I V + ++LV + + L L++ IP Sbjct: 1 MKIISRYFLQNFIPVFFVGLLLFTTILLVSPLFIIMDLVVARSIPLKTALELFITKIPPY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + V+ + + E++ + +G S + +L ++ + +F Sbjct: 61 LTYTFPMAIFLAVVYVIGQFSEHGEIMAMKASGASIKYFLPAILMFSLSAQLIMFYVNEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 + PK K L KA + EN+FF ++ Y K +P N + I +++ Sbjct: 121 VAPKAYEREKILMNKAYNNVIMPS-RENVFFNENNSFYFF-RKVDPKNKKFEDILLIELL 178 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + ++ ++ + + +GEV+ + + I KFK Y + A + Sbjct: 179 EKGNVRLIIHAEKALWDEFKGWTFMNGEVYSLNKEGEMIFQGKFKEYKVTLNRAPYQLVP 238 Query: 240 -LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 K ++ F + L ++EFH R+ IF ++++ Sbjct: 239 SSKPVEEMSIFEIVDQIRLLEGTGLNLNNLKTEFHIRIALPFTCPIFAILALGLGLNMGK 298 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + IS+ + + +F + K PY++ +L I + ++ KK Sbjct: 299 GGRSLSFGLSVISIFVYYIIFSIGRSLA-KAGIVPYFLGA-WLGNIVFLIIGIYLLNKKR 356 >gi|192359904|ref|YP_001981938.1| putative permease, YjgP/YjgQ family superfamily [Cellvibrio japonicus Ueda107] gi|190686069|gb|ACE83747.1| putative permease, YjgP/YjgQ family superfamily [Cellvibrio japonicus Ueda107] Length = 366 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 55/360 (15%), Positives = 137/360 (38%), Gaps = 19/360 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + + L + I + ++ + ++++L I Y + +L Sbjct: 2 IIFRYLSRDLLLTSLAVSAVLFTIFLTGKFSDYLDDAAQGKLAVDVLFTIIAYRMTGLLE 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + M ++E++++ G S L+ L + L++ + + + Sbjct: 62 LILPLGFYLAILLAYGRMYMDSEMVVLSACGISPGQLVGMTLVPSALIAAIVALFSFWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNTL-QGIFIVDSRD 180 P +Q A+ + F ++ F L + + + +N L Q +F+ Sbjct: 122 PLGAQLTEQTLAEQRNRSEFESMQPGRFQSLGQGKIMAYVESLSDDNRLLQHVFVAHQEG 181 Query: 181 TQTHKIYYAQSG----SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE-SANS 235 + I A++G D ++ ++LN G ++ P + + +I +F+ + + + Sbjct: 182 PDSSAIVVAETGTQMYRPDYGQRYLVLNQGYRYQGKPGTNEFTITRFEDWGRYLPPTTSV 241 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + I LK++ + + L N + R++ + +I L+++ Sbjct: 242 AEIELKSDAKTTAQLFRAEDNESIATLQ----------WRISMPIMVLIATLLAVP--LS 289 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + RQ + + + L F + + + + N +++ I LLMI Sbjct: 290 KTNPRQGRYLKMLPAILVYVFYLTFLINARSAITKGNLNPALGMWVVHLPFLVIALLMIN 349 >gi|221066429|ref|ZP_03542534.1| permease YjgP/YjgQ family protein [Comamonas testosteroni KF-1] gi|220711452|gb|EED66820.1| permease YjgP/YjgQ family protein [Comamonas testosteroni KF-1] Length = 369 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 60/365 (16%), Positives = 140/365 (38%), Gaps = 22/365 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ I + + RSF + + ++ + + +++ + + S + ++ + G+ + LP Sbjct: 2 LFDSSIRKELARSFGATAVVLITVVMTMMLIRTLGQAYKGSVSPSDVMLVMGFTVLGQLP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + + L+ M R++E++I G +L+KP+L A + + + + Sbjct: 62 TILGLSLFVAIVGSLSRMYRDSEMVIWFAAGQGLASLLKPLLRFAWPVILITAVLALGVL 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNT-LQGIFIVDSRD 180 P I+Q+ + Q + F + K +P++ +F+V SRD Sbjct: 122 PWSYQQIEQIKTQFQQRSDLDRIAPGEFQESAGGTRVFFVDKDSPSDMAASNVFVV-SRD 180 Query: 181 TQTHKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + A+ + ++ +IL DG+ + I +FK Y +Q ++ N I Sbjct: 181 PGKESVTSAKGAHLAVIKGQRMVILEDGQRMETRSDDGSVRITEFKEYGVQVDNDNPVAI 240 Query: 239 -VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + A L+ + RS RL + F ++ + + Sbjct: 241 EEMAARSMPTKDLIGMDEP----------IARSVLAWRLGLPFAALNFVILGLAI---SS 287 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHK--IEQNPYYIPILYLFLFCISSIFLLMIK 355 + + + I+L +F V++ + IL L I ++ +L++ Sbjct: 288 VNPRAGNSSSLMIAL-FAFIVYYNLMTLGESWVSANKIGMWGILGLLHGSILTVSVLVLL 346 Query: 356 KKYTK 360 ++ + Sbjct: 347 ARHFR 351 >gi|160898977|ref|YP_001564559.1| permease YjgP/YjgQ family protein [Delftia acidovorans SPH-1] gi|160364561|gb|ABX36174.1| permease YjgP/YjgQ family protein [Delftia acidovorans SPH-1] Length = 375 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 58/363 (15%), Positives = 132/363 (36%), Gaps = 16/363 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ I + + RSF + + ++ + + +++ + S + +L + GY + LP Sbjct: 2 LFDSSIRKELARSFGATVVVLITVVMTMMLIRTLGQAYKGNVSPSDVLLVMGYTVLGQLP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + + L+ M R++E++I G +L++P+L A + + + I Sbjct: 62 TILGLGLFVAVVGSLSRMYRDSEMVIWFAAGQGLASLLRPLLRFAWPVLAVIAVLGLGIL 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNTLQGIFIVDSRDT 181 P I+Q+ + + + F I K P+ T + + + Sbjct: 122 PWANQQIEQIKTQFEQRSDIDRIAPGEFQESAGGSRVFFIDKDVPSATAANNVFIVANER 181 Query: 182 QTHKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN--SST 237 + A+ ++ + +L DG+ + I +FK Y Q S + ++ Sbjct: 182 GRESVTSARGARLEVIKGERMAVLTDGQRMETQTSDGSVKISEFKEYGTQLGSGSNLAAA 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD-KR 296 + A LL P YR+E R+ L + F ++ + A Sbjct: 242 EEMAARSTYTHELL----------PRTEPIYRAELGWRIGLPLAALNFVILGLAVASVNP 291 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + +F + + G +++ P +L+ ++ + LL K Sbjct: 292 RAGGSGSLMLALFAFIVYYNLMTLGENWVASGKLSMPAMTALLHGGTLLLALLVLLARHK 351 Query: 357 KYT 359 +++ Sbjct: 352 RWS 354 >gi|218701755|ref|YP_002409384.1| hypothetical protein ECIAI39_3475 [Escherichia coli IAI39] gi|227887687|ref|ZP_04005492.1| inner membrane protein [Escherichia coli 83972] gi|301019930|ref|ZP_07184065.1| conserved hypothetical protein [Escherichia coli MS 196-1] gi|218371741|emb|CAR19592.1| conserved hypothetical protein; putative membrane protein [Escherichia coli IAI39] gi|227835083|gb|EEJ45549.1| inner membrane protein [Escherichia coli 83972] gi|299882028|gb|EFI90239.1| conserved hypothetical protein [Escherichia coli MS 196-1] gi|307555075|gb|ADN47850.1| putative permease [Escherichia coli ABU 83972] Length = 356 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 75/370 (20%), Positives = 138/370 (37%), Gaps = 32/370 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G + L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGNPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + +N L I + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIY-TS 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +I+ A+S + SP + + +Y L + + + + Sbjct: 180 TANRTRIFRARSVDVVD--------------PSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLE----------TYRSEFHKRLTQWLFPVIFGLIS 289 +NL LNP +PN + + +E R ++ L + Sbjct: 226 Y----RNLQLHLNPLDQSPNVKRKAKSVTELARSAFPADHAELQWRQSRGLT--ALLMAL 279 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 + + R RQ + + ++L + G IP L+L + Sbjct: 280 LAISLSRVKPRQGRFSTLLPLTLLFVAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMG 339 Query: 350 FLLMIKKKYT 359 L+++ + ++ Sbjct: 340 LLMLVARDFS 349 >gi|160902798|ref|YP_001568379.1| permease YjgP/YjgQ family protein [Petrotoga mobilis SJ95] gi|160360442|gb|ABX32056.1| permease YjgP/YjgQ family protein [Petrotoga mobilis SJ95] Length = 1153 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 58/356 (16%), Positives = 127/356 (35%), Gaps = 5/356 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+ + F M + + + + Q ++ + + LL + Y +P Sbjct: 1 MKKLFKYVSKEFIPPFFMGLIAFIVFVSLELLYQLSEIIVRNNVGFSKLLILIWYHLPYF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P V++ ++ E++ + G LI P + +++LLS F F N Sbjct: 61 ISMGIPVGVLFGIFWVISKLSSANEIIALQTLGIPMKKLIIPFMTISLLLSFFTFALFNT 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 I P K+ A + +EEN F + D Y+ + + + + L + + + + Sbjct: 121 IVPVSNYKAKEAMALYVYQRPQAQIEENQFVDVGDGRYLFVKQIDRESGILYDVLLYEVK 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + ++ AQ + +G + R + + F L + + Sbjct: 181 N-DYTAVFNAQQAQ--KGPDGWYMKNGRMFRTNEDGFLDLDITFDQLQLDIQEDVEEFLN 237 Query: 240 L-KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 K+ ++ S L + + + + L P++ ++ I + L Sbjct: 238 FSKSANEMTSKELKEKITTFSKLGLDVSGLIVSYQSKFANSLAPLVICILGIALSLFLNL 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + + F+ + I G S + + NP + +F I FL ++ Sbjct: 298 TSKSWSVITTFVLVIIYQGSGAWLSALGKEHIINPTISVWIPNIIFGIIGTFLFLM 353 >gi|332969352|gb|EGK08377.1| YjgP/YjgQ family permease [Kingella kingae ATCC 23330] Length = 370 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 54/365 (14%), Positives = 144/365 (39%), Gaps = 20/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ ++ + ++ I Q + + +S + +++ + + G+ + + P Sbjct: 2 IYKKQFIKETTLVAIGIFSVVLAILLFTQGVNMLGRAASGSVAIDAVGALIGFWVLGMTP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT R++E+ I ++G IKPVL A+ L++ + + + Sbjct: 62 LLLVLTAYISILTVLTRYWRDSEMAIWLSSGLGLKQWIKPVLTFALPLAMLVAAMQLFVL 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLD--DDLYIKISKYNPN-NTLQGIFIVDSR 179 P ++ + S +E+ F L ++ + +++ + +FI + Sbjct: 122 PNAELRSREYGELLKQKQNLSLIEQGTFAELGKQNNRVYFVEQFDAEVGEMSRLFIREVD 181 Query: 180 DTQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + +AQSG + +R+ ++L +G + + D + F+ L +A Sbjct: 182 EKGRDSVVFAQSGHMKLEADNRRVLVLQNGYRYTGNAGQGDFEQVSFQELQLVINTAPKL 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + S L + N Y++E R++ + + L+S++A Sbjct: 242 IEPINHRRTIPSQNLIGSDNP---------QYQAELMWRISLPITVI---LLSLLAIPIS 289 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIE--QNPYYIPILYLFLFCISSIFLLMI 354 + + + +++ G + + +E + P++ +L + + + IF+LM Sbjct: 290 YFNPRTGNSYHVVVAVGFFLFYQNGLTLLRDAVEDGKIPFWAGLLPMHIIMAACIFVLMK 349 Query: 355 KKKYT 359 + Sbjct: 350 MRSMP 354 >gi|148827127|ref|YP_001291880.1| 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [Haemophilus influenzae PittGG] gi|148718369|gb|ABQ99496.1| 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [Haemophilus influenzae PittGG] Length = 367 Score = 150 bits (380), Expect = 3e-34, Method: Composition-based stats. Identities = 46/356 (12%), Positives = 126/356 (35%), Gaps = 17/356 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + +S + L ++ I + Q ++ + ++ +++ + G +PT+ Sbjct: 2 ILIRYLIKEVFKSQIAILLILLLIFFSQQFVRVLGAAANGNVPADLVFSLLGLGMPTMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P C + + +E+ ++ G + L+K L +++L + + + Sbjct: 62 LMLPLCLFIAILLTFGRLYAESEITVMRACGVGQQILVKVALIMSLLTAGIAAYNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RD 180 P + A+ T L F +++ + +N ++ +++ + Sbjct: 122 PWAIQKQVNMVEDAKANPTVGVLSSGQFISTNNNNVVLFIDKIKDNQIRNVYLFQMTPQK 181 Query: 181 TQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G + Q + L + + + D I F Y ++ Sbjct: 182 QTKPSVITAEKGELIALPNGDQVLNLKNTKRVEGTSALPDFRITHFDEYQAYLGYQSAEN 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + LS L++ + ++ ++E H R+T L + LI++ R Sbjct: 242 TNDEVAELTLSQLIDLDSSSA----------KAELHWRITLILAVPLMALIAVP--LSRV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 RQ + + L S+ ++ L + +++ Sbjct: 290 NPRQGRFAKILPALLLYLIYFLLQSSFKSAGSAGKLEAELLMPLVNIGFFLLAVVL 345 >gi|295675785|ref|YP_003604309.1| permease YjgP/YjgQ family protein [Burkholderia sp. CCGE1002] gi|295435628|gb|ADG14798.1| permease YjgP/YjgQ family protein [Burkholderia sp. CCGE1002] Length = 365 Score = 150 bits (380), Expect = 3e-34, Method: Composition-based stats. Identities = 59/363 (16%), Positives = 133/363 (36%), Gaps = 18/363 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ + +++ + +S +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTLVLTTMMIRIVGFAASGEIDPRDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT +++E+++ ++G S IKP+ A + I + + Sbjct: 62 IMLVATLFVSILFVLTRWYKDSEMVVWLSSGVSLTQFIKPIGIFATPIIILIMFFVFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFR-LDDDLYIKISKYNPN-NTLQGIFIVDSRD 180 P K + A+ Q S L F I K +P+ ++ +F+ + + Sbjct: 122 PWSNQQSKLIRARFQQRDEVSLLAPGQFRESPSTHRVFFIEKMSPDQGHVENVFVTST-E 180 Query: 181 TQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + +++G ++ + ++L +G + P D IM+F+ Y ++ +S Sbjct: 181 GGKVNVVVSKNGHVETHKNGDRFVVLENGRRYDGEPGHPDFRIMEFERYGVKIQSQPVVN 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA-DKR 296 ++ L NP N +EF R L + L++I A Sbjct: 241 TPTTTGLPTMTLLRNPTNENL-----------AEFAWRAGLPLIAINLMLLAIPLAHQNP 289 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R + + I L+ S + ++I + IL++ + I + M + Sbjct: 290 RRSRTINLVMAVLIYLTYSNLLNVVQAWIEQGKMSFGIGLVILHVIVLGIVAFIFWMRVR 349 Query: 357 KYT 359 Sbjct: 350 NRP 352 >gi|153834578|ref|ZP_01987245.1| inner membrane protein YjgP [Vibrio harveyi HY01] gi|148869021|gb|EDL68066.1| inner membrane protein YjgP [Vibrio harveyi HY01] Length = 366 Score = 150 bits (380), Expect = 3e-34, Method: Composition-based stats. Identities = 51/357 (14%), Positives = 128/357 (35%), Gaps = 21/357 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + + + S ++ + G +P + Sbjct: 2 IIVRYLIRETLKSQFAIFFVLFLVFLSQKFISVLADASDGDIPAGLIFSVVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+++++ TG L++ L+LAI+ S + + Sbjct: 62 LMLPLSLYIGILITFGRLYAESEIVVMNATGIGNKFLVQAALYLAIITSGVAAFNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RD 180 P + ++QL + + L++ F D + ++TL +F+ RD Sbjct: 122 PWSQDRVEQLYEQVAAENSVDLLKKGQFQGTPDGSSVVFIDDIKDSTLSNVFVAQMRPRD 181 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + ++ SG + RQ I +++G + P + I KF Y Sbjct: 182 SILPSVMFSSSGEVKELSDGRQIITMHEGTRYEGVPTRVEYMITKFDQYEGLIGQREVKQ 241 Query: 238 IVLKANDQNLSFLL-NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L+ +P+P ++E R++ + L++++ Sbjct: 242 KGRDWEAYPTADLIGHPDPE-----------AQAELQWRISL-FVCI--PLLTMLVIPLS 287 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFLL 352 A+ ++ + + ++ I F S +E I ++ + + +L Sbjct: 288 AVNPRQGRFAKMGPAILIYLAYFLAISATKSALEDGAIPAAIGMWPINAMLLIVAIL 344 >gi|322514886|ref|ZP_08067903.1| inner membrane protein YjgP [Actinobacillus ureae ATCC 25976] gi|322119140|gb|EFX91290.1| inner membrane protein YjgP [Actinobacillus ureae ATCC 25976] Length = 367 Score = 150 bits (380), Expect = 3e-34, Method: Composition-based stats. Identities = 50/358 (13%), Positives = 123/358 (34%), Gaps = 21/358 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + I +S L ++ + + Q++ +N S +++L + G +P + Sbjct: 2 ILSRYLTKEIFKSQLAILFILLLMFFSQQLITVLNSAVSGKVPTDLVLSLLGLGMPALAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + L +E+ ++ G + L + FL+I + + + Sbjct: 62 FMLPLSLFVALLLTLGRFYTESEITVMRACGIGQSLLTQVAFFLSIFTTALAVYNVFWLT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIV--DSR 179 P + ++ A+A+ FS L F + I N N L I++ D + Sbjct: 122 PWAINKQSEMLAEAKSNPRFSALSAGQFMT-AGGYVLFIENINNEQNKLNDIYVFQPDQQ 180 Query: 180 DTQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + A+SG + Q + L + + + + D I F +Y + Sbjct: 181 KKNRPSVVVAESGQLQGLPNGDQILTLENSTRYEGTENTADFRISHFDNYQAYLGYQDVD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + + L+ + N ++E R L++++A Sbjct: 241 SNEKLVQRADFNKLMTDSSNEA----------KAELQWRFA---LIFAVPLMALLAVPMS 287 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYI-IHKIEQNPYYIPILYLFLFCISSIFLLM 353 ++ ++ + + ++ + F S + ++ L + ++M Sbjct: 288 SVNPRQGRFAKVIPAVLLYLIYFLLQSSLKSSGASGKLDATLLMPLVSIAFFILAMVM 345 >gi|171316728|ref|ZP_02905940.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria MEX-5] gi|171098078|gb|EDT42893.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria MEX-5] Length = 363 Score = 150 bits (380), Expect = 3e-34, Method: Composition-based stats. Identities = 60/365 (16%), Positives = 139/365 (38%), Gaps = 23/365 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ I +++ + +S +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTIMLTTMMIRIVGYAASGEIDPRDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT R++E+++ +G S LIKP+ A + + + + Sbjct: 62 VMLVVTLFVSILFVLTRWYRDSEMVVWLASGVSLTRLIKPIGVFATPIILLIAFFAFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNT-LQGIFIVDSRD 180 P K + A+ Q S L F + I K +P+ + +Q +F+ + + Sbjct: 122 PWSNQQSKMIKARFQQRDEISLLAPGQFRESASNHRVFFIEKMSPDQSKVQNVFVTSTEN 181 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + I + +G + + ++L DG + +P + IM+F+ Y ++ S + + Sbjct: 182 GKV-NIVVSHTGHTETKDGDRFVVLEDGRRYDGTPGQPNFKIMEFQRYGVKITSTPVTNV 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + L NP +N +EF R L + ++ I Sbjct: 241 PTTNSTPTPDLLRNPTRDNL-----------AEFAWRAGLPLIAINLMVLGIP--LSYQN 287 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI----LYLFLFCISSIFLLMI 354 R+ + I+ + +++ I + + +IEQ + L++ + I ++ + Sbjct: 288 PRRSRTIN-LVMAVLIYLTYSNLLNVVQAQIEQGKMSFGVGLVGLHVIVAAIVALIFWLR 346 Query: 355 KKKYT 359 + Sbjct: 347 VRNRP 351 >gi|145637645|ref|ZP_01793300.1| molybdate ABC transporter permease protein [Haemophilus influenzae PittHH] gi|145269168|gb|EDK09116.1| molybdate ABC transporter permease protein [Haemophilus influenzae PittHH] Length = 367 Score = 150 bits (380), Expect = 3e-34, Method: Composition-based stats. Identities = 47/356 (13%), Positives = 127/356 (35%), Gaps = 17/356 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + +S + L ++ I + Q ++ + ++ +++ + G +PT+ Sbjct: 2 ILIRYLIKEVFKSQIAILLILLLIFFSQQFVRVLGAAANGNVPADLVFSLLGLGMPTMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P C + + +E+ ++ G + L+K L +++L + + + Sbjct: 62 LMLPLCLFIAILLTFGRLYAESEITVMRACGVGQRILVKVALIMSLLTAGIAAYNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RD 180 P + A+ T L F +++ + +N ++ +++ + Sbjct: 122 PWAIQKQVNIVEDAKANPTVGVLSSGQFISTNNNNVVLFIDKIKDNQIRNVYLFQMTPQK 181 Query: 181 TQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G + Q + L + + + + D I F Y + Sbjct: 182 QTKPSVVTAEKGELIALPNGDQVLNLKNTKRVEGTSVLPDFRITHFDEYRAYLGYQAAEN 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +A + LS L++ + ++ ++E H R+T L + LI++ R Sbjct: 242 TNDEAAELTLSQLIDLDSSSA----------KAELHWRITLILAVPLMALIAVP--LSRV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 RQ + + L S+ ++ L + +++ Sbjct: 290 NPRQGRFAKILPALLLYLIYFLLQSSFKSAGAAGKLEAELLMPLVNIGFFLLAVVL 345 >gi|269140438|ref|YP_003297139.1| putative permease [Edwardsiella tarda EIB202] gi|267986099|gb|ACY85928.1| putative permease [Edwardsiella tarda EIB202] gi|304560231|gb|ADM42895.1| Predicted permease [Edwardsiella tarda FL6-60] Length = 366 Score = 150 bits (380), Expect = 3e-34, Method: Composition-based stats. Identities = 58/359 (16%), Positives = 141/359 (39%), Gaps = 27/359 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + V + N++ + G IP + Sbjct: 2 IIIRYLVRETFKSQVAILFILLLIFFCQKMVRILGAVVNGDIPTNLVFSLLGLGIPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA + ++ + Sbjct: 62 LILPLSLFLGLLMTLGRLYTESEITVMHACGLSKAVLVKAAMALAFITGALALVNAFWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD-- 180 P ++ A+A+ + L E F D Y+ + +F+ R Sbjct: 122 PWSSLHSDEVMAEARANPGLASLAEGQFQPSQDGNYVLFVGNVKDKKFHNVFLAQLRPSG 181 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 +Q + A SG + Q ++L+ G + + + +D I F Y+ ++ Sbjct: 182 SQRPSVVVADSGHLVEMKDGAQKVVLDSGTRYEGTAMLRDFRITDFVDYSAIIGHKSAML 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 A+ ++S L + + +R+EFH RLT ++ L+ + Sbjct: 242 DPNNADQASMSALWHSQEPS----------FRAEFHWRLTLVFSVIVMALMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFLFCISSIFLLM 353 RQ + +S+ + ++ F + + N P+++++ ++ ++LL+ Sbjct: 290 NPRQGR-----VLSMLPAMLLYLIFFLLQSSLRSNGGKDKLDPMIWMW--GVNGLYLLL 341 >gi|161524006|ref|YP_001579018.1| permease YjgP/YjgQ family protein [Burkholderia multivorans ATCC 17616] gi|189351233|ref|YP_001946861.1| YjgP/YjgQ-like transporter [Burkholderia multivorans ATCC 17616] gi|221199307|ref|ZP_03572351.1| putative membrane protein [Burkholderia multivorans CGD2M] gi|221205791|ref|ZP_03578806.1| putative membrane protein [Burkholderia multivorans CGD2] gi|221211524|ref|ZP_03584503.1| putative membrane protein [Burkholderia multivorans CGD1] gi|160341435|gb|ABX14521.1| permease YjgP/YjgQ family protein [Burkholderia multivorans ATCC 17616] gi|189335255|dbj|BAG44325.1| YjgP/YjgQ-like transporter [Burkholderia multivorans ATCC 17616] gi|221168885|gb|EEE01353.1| putative membrane protein [Burkholderia multivorans CGD1] gi|221174629|gb|EEE07061.1| putative membrane protein [Burkholderia multivorans CGD2] gi|221180592|gb|EEE12995.1| putative membrane protein [Burkholderia multivorans CGD2M] Length = 364 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 57/362 (15%), Positives = 131/362 (36%), Gaps = 16/362 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ I +++ + +S +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTIMLTTMMIRIVGYAASGEVDPKDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT R++E+++ +G S LIKP+ A + + + + Sbjct: 62 VMLVVTLFVSILFVLTRWYRDSEMVVWLASGVSLTRLIKPIGVFATPIIVLITFFAFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNT-LQGIFIVDSRD 180 P + + A+ Q S L F + I K P+ + +Q +F+ + + Sbjct: 122 PWSNQQSRLIKARFQQRDEISLLAPGQFRESASNHRVFFIEKMTPDQSKVQNVFVTSTEN 181 Query: 181 TQTHKIY--YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + + + + + ++L DG + +P + IM+F+ Y ++ S + Sbjct: 182 GKVNVVVSQTGHTETTKDGDRFVVLEDGRRYDGTPGQPNFKIMEFERYGVKITSKPVVNV 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA-DKRA 297 ++ L NP +N +EF R L + ++ I A Sbjct: 242 PTTSSTPTPELLRNPTRDNL-----------AEFAWRAGLPLIAINLMVLGIPLAYQNPR 290 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 R + + I L+ S + + I + L++ + I + + + Sbjct: 291 RSRTINLVMAVLIYLTYSNLLNVVQAQIEQGKMSFGVGLVALHVVVAAIVAFIFWLRVRN 350 Query: 358 YT 359 Sbjct: 351 RP 352 >gi|172061426|ref|YP_001809078.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria MC40-6] gi|171993943|gb|ACB64862.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria MC40-6] Length = 363 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 61/365 (16%), Positives = 139/365 (38%), Gaps = 23/365 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ I +++ + +S +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTIMLTTMMIRIVGYAASGEIDPRDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT R++E+++ +G S LIKP+ A L + + + Sbjct: 62 VMLVVTLFVSILFVLTRWYRDSEMVVWLASGVSLTRLIKPIGVFATPLILLIAFFAFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNT-LQGIFIVDSRD 180 P K + A+ Q S L F + I K +P+ + +Q +F+ + + Sbjct: 122 PWSNQQSKMIKARFQQRDEISLLAPGQFRESASNHRVFFIEKMSPDQSKVQNVFVTSTEN 181 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + I + +G + + ++L DG + +P + IM+F+ Y ++ S + + Sbjct: 182 GKV-NIVVSHTGHTETKDGDRFVVLEDGRRYDGTPGQPNFKIMEFQRYGVKITSTPVTNV 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + L NP +N +EF R L + ++ I Sbjct: 241 PTTNSTPTPDLLRNPTRDNL-----------AEFAWRAGLPLIAINLMVLGIP--LSYQN 287 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI----LYLFLFCISSIFLLMI 354 R+ + I+ + +++ I + + +IEQ + L++ + I ++ + Sbjct: 288 PRRSRTIN-LVMAVLIYLTYSNLLNVVQAQIEQGKMSFGVGLVGLHVIVAAIVALIFWLR 346 Query: 355 KKKYT 359 + Sbjct: 347 VRNRP 351 >gi|190150428|ref|YP_001968953.1| hypothetical protein APP7_1159 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303250152|ref|ZP_07336354.1| permease [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303253325|ref|ZP_07339474.1| permease [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|189915559|gb|ACE61811.1| hypothetical protein APP7_1159 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302648007|gb|EFL78214.1| permease [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302651215|gb|EFL81369.1| permease [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 367 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 52/358 (14%), Positives = 122/358 (34%), Gaps = 21/358 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + I +S L ++ + + Q++ +N S +++L + G +P + Sbjct: 2 ILSRYLTKEIFKSQLAILFILLLMFFSQQLITVLNSAVSGKVPTDLVLSLLGLGMPALAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + L +E+ ++ G + L K FL+I + + + Sbjct: 62 FMLPLSLFVALLLTLGRFYAESEITVMRACGIGKSLLTKVAFFLSIFTTALAVYNVFWLT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIV--DSR 179 P + ++ A+A+ FS L F + I N N L I++ D + Sbjct: 122 PWAINKQSEMLAEAKSNPRFSALSAGQFMT-AGGYVLFIENINNEQNKLNDIYVFQPDQQ 180 Query: 180 DTQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + A+SG + Q + L + + + D I F SY + Sbjct: 181 KKNRPSVVVAESGQLQGLPNGDQILTLENSTRYEGTANVADFRISHFDSYQAYLGYQDVD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + + L+ + ++E R L L++++A Sbjct: 241 SNEKLVQRADFNKLM----------ADQSNEAKAELQWRFALIL---AVPLMALLAVPMS 287 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYI-IHKIEQNPYYIPILYLFLFCISSIFLLM 353 ++ ++ + + ++ + F S + ++ L + ++M Sbjct: 288 SVNPRQGRFAKVIPAVLLYLIYFLLQSSLKSSGASGKLDATLLMPLVSIAFFILAMVM 345 >gi|300931864|ref|ZP_07147161.1| conserved hypothetical protein [Escherichia coli MS 187-1] gi|300460287|gb|EFK23780.1| conserved hypothetical protein [Escherichia coli MS 187-1] Length = 353 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 70/363 (19%), Positives = 139/363 (38%), Gaps = 21/363 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + +N L I + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIY-TS 179 Query: 180 DTQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 +I+ A+S + ++ ++L++G + +D + ++ + Sbjct: 180 TANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYR----NLQLPLDQ 235 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + +K ++++ L +E R ++ L + + + R Sbjct: 236 SPNVKRKAKSVTEL----------ARSAFPADHAELQWRQSRGLT--ALLMALLAISLSR 283 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 RQ + + ++L + G IP L+L + L+++ + Sbjct: 284 VKPRQGRFSTLLPLTLLFVAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMGLLMLVAR 343 Query: 357 KYT 359 ++ Sbjct: 344 DFS 346 >gi|258625833|ref|ZP_05720712.1| conserved hypothetical protein [Vibrio mimicus VM603] gi|258582071|gb|EEW06941.1| conserved hypothetical protein [Vibrio mimicus VM603] Length = 366 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 57/364 (15%), Positives = 130/364 (35%), Gaps = 19/364 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + ++ + S +++L I G +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASDGEIPTSMILSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LA++ + + + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RD 180 P + QL + + L++ F R D + N L +F+ RD Sbjct: 122 PWSQDKEAQLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLHNVFVAQLAPRD 181 Query: 181 TQTHKIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + ++ SG + RQ I L +G + P D I F SY Sbjct: 182 SILPSVMFSNSGDVKELSDGRQIITLYNGTRYEGVPTRVDYMITNFDSYD-----GLIGQ 236 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +K++D++ L + ++E RL+ V L++++ A Sbjct: 237 REVKSSDRDWEAL-----PTLSLLKNSDLQAQAELQWRLS---LVVCIPLLTMLVVPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ + + ++ I F S ++ I+ L+ + + ++ Sbjct: 289 VNPRQGRFAKMGPAILIYLTYFLALS-ATKSAIEDGSLPVIIGLWPVNAALLIAALVVNT 347 Query: 358 YTKI 361 I Sbjct: 348 MDSI 351 >gi|145588807|ref|YP_001155404.1| permease YjgP/YjgQ family protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047213|gb|ABP33840.1| permease YjgP/YjgQ family protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 371 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 62/361 (17%), Positives = 138/361 (38%), Gaps = 17/361 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ + R + + L +V I +++ + ++ + +L + L Sbjct: 2 IFKQALRRELSLTTGGVFLVLVTIMITTLVIRILGFAANGAINPEDVLVLISLATLGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VL +++E+++ +G S LI+P+L A L I + + + Sbjct: 62 VLLTVSLFVATLIVLVRWYKDSEMIVWFASGLSISNLIRPILQFATPLIIIIALLALFVW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIKISKYN-PNNTLQGIFIVDSRD 180 P +S + Q S + F + I + + N ++ IF+ DS++ Sbjct: 122 PWANRESTLISQRFQQRDDVSMVSSGQFRESARAERVFFIEELDVDKNEVKNIFVADSKN 181 Query: 181 TQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A +G I ++L++G + P D I++F YT + S + Sbjct: 182 GRVSVAV-ASAGYIQNSEDGEKSVVLHNGRRYEGQPTQPDFRILEFTDYTTKIRSKEALA 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ +S LLN P + R+E R+ L + LI+I A Sbjct: 241 PPPRDREKTISELLNETE------PTTINPNRAELLWRIGLPLMALGLVLIAIPLA---Y 291 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN--PYYIPILYLFLFCISSIFLLMIK 355 + + +F ++ I + + + Q +++ I + L + +L+ Sbjct: 292 VNPRLGNYTAMFYAILIYLIYSNLLNLTQNFVSQGKFGFFVGIWPIHLLALVIATILIRN 351 Query: 356 K 356 + Sbjct: 352 R 352 >gi|194333657|ref|YP_002015517.1| permease YjgP/YjgQ family protein [Prosthecochloris aestuarii DSM 271] gi|194311475|gb|ACF45870.1| permease YjgP/YjgQ family protein [Prosthecochloris aestuarii DSM 271] Length = 444 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 52/260 (20%), Positives = 104/260 (40%), Gaps = 11/260 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL+ FL + L I+F+ + I L ++ ++ I + Sbjct: 1 MKIVDRYILKAHAAPFLFAFLTIIFVFTLQFFSLFIARFVGKGLDLLVISELILLQISWM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + T ++ +E+ ++ + G S +I PVL A +L+ + N+ Sbjct: 61 VVLAVPMAVLVSTLMAFGNLTNRSEIAVMRSGGLSMSRVILPVLIAASVLAFLVERFNNV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 + P+ K L L EN F D I + +P+ L+G+ I + Sbjct: 121 VLPEANYQAKMLLRDITKTKPSFGLTENAFSSFIDGYSILVRDIDPDSGELRGVTIYEGT 180 Query: 180 DTQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISK-DISIMKFKSYTLQTESA- 233 + A++GSI + + + L +GE+H +K + +M F + S Sbjct: 181 RDDYSTVITAETGSISFTQDSHYLIMELYNGEIHEMIMNTKEEYRLMSFSRHRFVFSSTG 240 Query: 234 ----NSSTIVLKANDQNLSF 249 + ++ D++L+ Sbjct: 241 YGFERTDPESVRRGDRDLAA 260 Score = 39.9 bits (92), Expect = 0.59, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 39/105 (37%), Gaps = 4/105 (3%) Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 + L+ + + + + Y E+HK+ +IF L+ A L ++ Sbjct: 327 MLEELDASIDRISADRRMYNKYMVEYHKKYALSFACIIFVLVG---APLGVLAKRGGFGV 383 Query: 307 PIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 ++L+ F ++W + + P ++L I F+ Sbjct: 384 GAGLALAF-FVLYWALLILGEHLADRNLLHPGFAMWLANILMAFI 427 >gi|229524483|ref|ZP_04413888.1| hypothetical protein VCA_002078 [Vibrio cholerae bv. albensis VL426] gi|229338064|gb|EEO03081.1| hypothetical protein VCA_002078 [Vibrio cholerae bv. albensis VL426] Length = 366 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 55/347 (15%), Positives = 119/347 (34%), Gaps = 19/347 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + ++ + S +++L I G +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLAEASDGEIPTSMILSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LA++ + + + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RD 180 P + L + + L++ F R D + N L +F+ RD Sbjct: 122 PWSQDKEAHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLYNVFVAQLAPRD 181 Query: 181 TQTHKIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + ++ SG + RQ I L DG + P D I F SY + Sbjct: 182 SILPSVMFSHSGDVKELSDGRQIITLYDGTRYEGVPTRVDYMITNFDSYDGLIGQREVKS 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 LLN ++E R++ V L++++ A Sbjct: 242 AERDWEALPTLSLLN----------NADRRAQAELQWRIS---LVVCIPLLTMLVVPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 + ++ + + ++ I F S ++ I+ L+ Sbjct: 289 VNPRQGRFAKMGPAILIYLTYFLALS-ATKSAIEDGSLPVIIGLWPI 334 >gi|28899417|ref|NP_799022.1| putative permease [Vibrio parahaemolyticus RIMD 2210633] gi|153839665|ref|ZP_01992332.1| inner membrane protein YjgP [Vibrio parahaemolyticus AQ3810] gi|260879348|ref|ZP_05891703.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034] gi|260895693|ref|ZP_05904189.1| conserved inner membrane protein [Vibrio parahaemolyticus Peru-466] gi|260900265|ref|ZP_05908660.1| conserved inner membrane protein [Vibrio parahaemolyticus AQ4037] gi|28807653|dbj|BAC60906.1| putative permease [Vibrio parahaemolyticus RIMD 2210633] gi|149746808|gb|EDM57796.1| inner membrane protein YjgP [Vibrio parahaemolyticus AQ3810] gi|308087429|gb|EFO37124.1| conserved inner membrane protein [Vibrio parahaemolyticus Peru-466] gi|308093070|gb|EFO42765.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034] gi|308107549|gb|EFO45089.1| conserved inner membrane protein [Vibrio parahaemolyticus AQ4037] gi|328471446|gb|EGF42341.1| putative permease [Vibrio parahaemolyticus 10329] Length = 366 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 51/357 (14%), Positives = 123/357 (34%), Gaps = 25/357 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + + + S ++ I G +P + Sbjct: 2 IIVRYLIRETLKSQFAIFFVLFLVFVSQKFISVLADASDGDIPAGLIFSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+++++ TG L++ L+LA++ S + + Sbjct: 62 LMLPLSLYIGILITFGRLYAESEIVVMNATGIGNKFLVQAALYLALITSGVAAFNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RD 180 P + ++ L + + L++ F D + ++TL +F+ RD Sbjct: 122 PWSQDRVEHLYEQVAAENSVDLLKKGQFQGTPDGSSVVFIDDIKDSTLSNVFVAQMRPRD 181 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + ++ SG + RQ I + +G + P + I KF Y Sbjct: 182 SVLPSVMFSSSGEVKELSDGRQVITMQEGTRYEGVPTRVEYMITKFDEYEGVIGQREVKQ 241 Query: 238 IVLKANDQNLSFLL-NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L+ +P+P ++E R++ + L++++ Sbjct: 242 KGRDWEAYPTADLIGHPDPE-----------AQAELQWRISL-FVCI--PLLTMLVIPLS 287 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-----NPYYIPILYLFLFCISS 348 A+ ++ + + ++ I F S +E PI + L Sbjct: 288 AVNPRQGRFAKMGPAILIYLAYFLAISATKSALEDGAIPAAIGMWPINAMLLIVAIM 344 >gi|226946453|ref|YP_002801526.1| YjgP/YjgQ family permease [Azotobacter vinelandii DJ] gi|226721380|gb|ACO80551.1| permease YjgP/YjgQ family [Azotobacter vinelandii DJ] Length = 357 Score = 150 bits (379), Expect = 4e-34, Method: Composition-based stats. Identities = 56/365 (15%), Positives = 127/365 (34%), Gaps = 21/365 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E Y++ R L+ + I + + ++ T S ++ I Y + Sbjct: 1 MLLIERYVISEARRPLLVMLGILTSIFAAYSAERYLGEAANGTLSPEVVFDIVVYKVMIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + L + ++E+ + G S + L V LA+ +++ + Sbjct: 61 LEVLVPVALYVSVALGLGRLYHDSEITAVAAAGMSPLRLYGAVAILALPIAVGVTALSLY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFF-RLDDDLYIKISKYN-PNNTLQGIFIVDS 178 P + QL +++ L +L F ++ I + + ++LQ + I D Sbjct: 121 GRPWAYANAYQLEQESKTELDIDHLLAERFNINAENGRMILAERVDRATDSLQDVLIFDG 180 Query: 179 RDTQTHKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 +++T Y +Q I D D + + +G + ++FK + + + Sbjct: 181 GESRTRL-YRSQEARIADPDPDDPVVEMTNGTAYSLQHDGTQDKRIEFKRLNIHLQPLET 239 Query: 236 S-TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + KA P +E R ++ + I L++I Sbjct: 240 NMESRRKAASWQTLEASAGLPEQ------------AELQWRESRGVSTFILALLAIP--L 285 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R R+ + + ++ + + G + P L+L + + L +I Sbjct: 286 SRTAPRRGRFATLLPVTAVYAVIFYAGDICKSLVGNGSLPLTPGLWLVPLAMGLVLLALI 345 Query: 355 KKKYT 359 ++ Sbjct: 346 VRERA 350 >gi|156975868|ref|YP_001446775.1| hypothetical protein VIBHAR_03634 [Vibrio harveyi ATCC BAA-1116] gi|156527462|gb|ABU72548.1| hypothetical protein VIBHAR_03634 [Vibrio harveyi ATCC BAA-1116] Length = 366 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 129/357 (36%), Gaps = 21/357 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + + + S ++ + G +P + Sbjct: 2 IIVRYLIRETLKSQFAIFFVLFLVFLSQKFISVLAKASDGDIPAGLIFSVVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+++++ TG L++ L LAI+ S + + Sbjct: 62 LMLPLSLYIGILITFGRLYAESEIVVMNATGIGNKFLVQAALCLAIITSGVAAFNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RD 180 P + ++QL + + + L++ F D + ++TL +F+ RD Sbjct: 122 PWSQDRVEQLYDQVEAENSVDLLQKGQFQGTPDGSSVVFIDDIKDSTLSNVFVAQMRPRD 181 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + ++ SG + RQ I +++G + P + + KF Y Sbjct: 182 SILPSVMFSSSGEVKELADGRQIITMHEGTRYEGVPTRVEYMVTKFDQYEGVIGQREVKQ 241 Query: 238 IVLKANDQNLSFLL-NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 L+ +P+P ++E R++ + L++++ Sbjct: 242 KGRDWEAYPTLDLIGHPDPE-----------AQAELQWRISL-FVCI--PLLTMLVIPLS 287 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFLL 352 A+ ++ + + ++ I F S +E+ + I ++ + + +L Sbjct: 288 AVNPRQGRFAKMGPAILIYLAYFLAISATKSALEEGTFPAAIGMWPINAMLLIVAIL 344 >gi|145635439|ref|ZP_01791140.1| predicted permease [Haemophilus influenzae PittAA] gi|145267313|gb|EDK07316.1| predicted permease [Haemophilus influenzae PittAA] Length = 367 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 47/356 (13%), Positives = 127/356 (35%), Gaps = 17/356 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + +S + L ++ I + Q ++ + ++ +++ + G +PT+ Sbjct: 2 ILIRYLIKEVFKSQIAILLILLLIFFSQQFVRVLGAAANGNVPADLVFSLLGLGMPTMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P C + + +E+ ++ G + L+K L +++L + + + Sbjct: 62 LMLPLCLFIAILLTFGRLYAESEITVMRACGVGQRILVKVALIMSLLTAGIAAYNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RD 180 P + A+ T L F +++ + +N ++ +++ + Sbjct: 122 PWAIQKQVNMVEDAKANPTVGVLSSGQFISTNNNNVVLFIDKIKDNQIRNVYLFQMTPQK 181 Query: 181 TQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G + Q + L + + + + D I F Y ++ Sbjct: 182 QTKPSVITAEKGELIALPNGDQVLNLKNTKRVEGTSVLPDFRITHFDEYQAYLGYQSAEN 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + LS L++ N ++ ++E H R+T L + LI++ R Sbjct: 242 TNDEVAELTLSQLIDLNSSSA----------KAELHWRITLILAVPLMALIAVP--LSRV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 RQ + + L S+ ++ L + +++ Sbjct: 290 NPRQGRFAKILPALLLYLIYFLLQSSFKSAGSAGKLEAELLMPLVNIGFFLLAVVL 345 >gi|229845239|ref|ZP_04465372.1| hypothetical protein CGSHi6P18H1_02459 [Haemophilus influenzae 6P18H1] gi|229811834|gb|EEP47530.1| hypothetical protein CGSHi6P18H1_02459 [Haemophilus influenzae 6P18H1] Length = 367 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 47/356 (13%), Positives = 127/356 (35%), Gaps = 17/356 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + +S + L ++ I + Q ++ + ++ +++ + G +PT+ Sbjct: 2 ILIRYLIKEVFKSQIAILLILLLIFFSQQFVRVLGAAANGNVPADLVFSLLGLGMPTMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P C + + +E+ ++ G + L+K L +++L + + + Sbjct: 62 LMLPLCLFIAILLTFGRLYAESEITVMRACGVGQRILVKVALIMSLLTAGIAAYNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RD 180 P + A+ T L F +++ + +N ++ +++ + Sbjct: 122 PWAIQKQVNIVKDAKANPTVGVLSSGQFISTNNNNVVLFIDKIKDNQIRNVYLFQMTPQK 181 Query: 181 TQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G + Q + L + + + + D I F Y + Sbjct: 182 QTKPSVVTAEKGELIALPNGDQVLNLKNTKRVEGTSVLPDFRITHFDEYRAYLGYQAAEN 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +A + LS L++ + ++ ++E H R+T L + LI++ R Sbjct: 242 TNDEAAELTLSQLIDLDSSS----------VKAELHWRITLILAVPLMALIAVP--LSRV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 RQ + + L S+ ++ L + +++ Sbjct: 290 NPRQGRFAKILPALLLYLIYFLLQSSFKSAGAAGKLEAELLMPLVNIGFFLLAVVL 345 >gi|312142810|ref|YP_003994256.1| permease YjgP/YjgQ family protein [Halanaerobium sp. 'sapolanicus'] gi|311903461|gb|ADQ13902.1| permease YjgP/YjgQ family protein [Halanaerobium sp. 'sapolanicus'] Length = 366 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 54/364 (14%), Positives = 120/364 (32%), Gaps = 16/364 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQIL-QRINLVSSSTESLNILLKISGYLIPT 59 MK+ + YI + + FL I ++ + + LL++ +P Sbjct: 1 MKTVDKYIYKELIAPFLFGVAAFTGIFIGTDLIFEVTEYYIEWGVDVLTLLRLFFLSLPE 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ + P + T ++ ++E+ + G S + ++ P L + ++ S Sbjct: 61 IIILTFPMAALLGTIMAYNRLSGDSEITAMRAGGISIMAIVLPALIMGLVTSGITIAITE 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD------DLYIKISKYNP-NNTLQG 172 I P +Q+ + + + +LF D D + +N N + Sbjct: 121 FIVPGANYQAEQIIHQFKHGERRPDTQYDLFLTPLDSRTSRPDYMLYAKSFNAENGRMTD 180 Query: 173 IFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ--- 229 + + D + + A+ D +G V+ + S ++F Y + Sbjct: 181 VVLQSFEDGRPRSVLEAEEALWLRD--GWSFFNGTVYFLDREDRSPS-LEFSQYRSREDI 237 Query: 230 TESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 A + + ++ N+ L N + + R EFH R + + IF L++ Sbjct: 238 HSPAQAGKLGKDIDEMNIREL-NEHIALLEQQGRAAYEERVEFHHRFSVPMASFIFALLA 296 Query: 290 IVAADKRALVRQRK-KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 K I + I + + + + P+ L + + Sbjct: 297 APLGIKPQRSAGSATGFGISIIIIFIYYVLMTIGDALGSQGTIEPWLGAWLQNIIIFLVG 356 Query: 349 IFLL 352 LL Sbjct: 357 SGLL 360 >gi|15642496|ref|NP_232129.1| hypothetical protein VC2500 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|153215710|ref|ZP_01950091.1| membrane protein, putative [Vibrio cholerae 1587] gi|153822404|ref|ZP_01975071.1| membrane protein, putative [Vibrio cholerae B33] gi|153831206|ref|ZP_01983873.1| putative membrane protein [Vibrio cholerae 623-39] gi|227082619|ref|YP_002811170.1| hypothetical protein VCM66_2422 [Vibrio cholerae M66-2] gi|229507442|ref|ZP_04396947.1| hypothetical protein VCF_002671 [Vibrio cholerae BX 330286] gi|229509633|ref|ZP_04399114.1| hypothetical protein VCE_001033 [Vibrio cholerae B33] gi|229516758|ref|ZP_04406204.1| hypothetical protein VCC_000775 [Vibrio cholerae RC9] gi|229521565|ref|ZP_04410983.1| hypothetical protein VIF_002101 [Vibrio cholerae TM 11079-80] gi|229606948|ref|YP_002877596.1| hypothetical protein VCD_001857 [Vibrio cholerae MJ-1236] gi|254291418|ref|ZP_04962210.1| membrane protein, putative [Vibrio cholerae AM-19226] gi|254851045|ref|ZP_05240395.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255744521|ref|ZP_05418473.1| putative membrane protein [Vibrio cholera CIRS 101] gi|297581347|ref|ZP_06943270.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|298500669|ref|ZP_07010473.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|9657081|gb|AAF95642.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|124114628|gb|EAY33448.1| membrane protein, putative [Vibrio cholerae 1587] gi|126520047|gb|EAZ77270.1| membrane protein, putative [Vibrio cholerae B33] gi|148873313|gb|EDL71448.1| putative membrane protein [Vibrio cholerae 623-39] gi|150422608|gb|EDN14563.1| membrane protein, putative [Vibrio cholerae AM-19226] gi|227010507|gb|ACP06719.1| putative membrane protein [Vibrio cholerae M66-2] gi|229341159|gb|EEO06163.1| hypothetical protein VIF_002101 [Vibrio cholerae TM 11079-80] gi|229345821|gb|EEO10793.1| hypothetical protein VCC_000775 [Vibrio cholerae RC9] gi|229353107|gb|EEO18046.1| hypothetical protein VCE_001033 [Vibrio cholerae B33] gi|229354947|gb|EEO19868.1| hypothetical protein VCF_002671 [Vibrio cholerae BX 330286] gi|229369603|gb|ACQ60026.1| hypothetical protein VCD_001857 [Vibrio cholerae MJ-1236] gi|254846750|gb|EET25164.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255738046|gb|EET93439.1| putative membrane protein [Vibrio cholera CIRS 101] gi|297534185|gb|EFH73023.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|297540838|gb|EFH76895.1| conserved hypothetical protein [Vibrio cholerae MAK 757] Length = 366 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 55/347 (15%), Positives = 119/347 (34%), Gaps = 19/347 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + ++ + S +++L I G +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASDGEIPTSMILSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LA++ + + + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RD 180 P + L + + L++ F R D + N L +F+ RD Sbjct: 122 PWSQDKEAHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLYNVFVAQLAPRD 181 Query: 181 TQTHKIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + ++ SG + RQ I L DG + P D I F SY + Sbjct: 182 SILPSVMFSHSGDVKELSDGRQIITLYDGTRYEGVPTRVDYMITNFDSYDGLIGQREVKS 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 LLN ++E R++ V L++++ A Sbjct: 242 AERDWEALPTLSLLN----------NADRRAQAELQWRIS---LVVCIPLLTMLVVPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 + ++ + + ++ I F S ++ I+ L+ Sbjct: 289 VNPRQGRFAKMGPAILIYLTYFLALS-ATKSAIEDGSLPVIIGLWPI 334 >gi|90580731|ref|ZP_01236534.1| putative permease [Vibrio angustum S14] gi|90437999|gb|EAS63187.1| putative permease [Vibrio angustum S14] Length = 366 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 57/362 (15%), Positives = 123/362 (33%), Gaps = 25/362 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R +S L + + + + + + + +++L G IP++ Sbjct: 2 IIVRYLTRETLKSQLAVLFVLFLVFISQKFISILADATDGSIPSDLILTFMGLSIPSMAL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG + L++ L LA++ ++ + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGMGKKLLLQSALALAVITGAIAAVNSFWVA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNNT-LQGIFIVD--S 178 P + I+QL + + T + L + F + I I + L +F+ + Sbjct: 122 PWSQEHIEQLKEETKAGPTLNMLVKGTFQPAPNGSGVIFIDNITDKGSKLHKVFVAQLKA 181 Query: 179 RDTQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 DT + A +G++ RQ + LNDG + P + SI F Y Sbjct: 182 TDTLQPSVIVADNGTVKELSDGRQMLELNDGARYEGVPTQLNYSITHFNDYQALIGQREV 241 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 Q L+ + ++E R + L L+ ++ Sbjct: 242 KAGNRDWEAQPTMALI----------KDQSLAAKAELQWRFSLVLC---IPLLVMIVVPL 288 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIE-----QNPYYIPILYLFLFCISSIF 350 A+ ++ + + ++ I F S IE PI L ++ Sbjct: 289 SAVNPRQGRFAKLAPAVLIYLAYFLAISSAKSAIEDGIIPSAIGMWPINITTLLVALALN 348 Query: 351 LL 352 Sbjct: 349 SW 350 >gi|209519258|ref|ZP_03268060.1| permease YjgP/YjgQ family protein [Burkholderia sp. H160] gi|209500338|gb|EEA00392.1| permease YjgP/YjgQ family protein [Burkholderia sp. H160] Length = 365 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 59/363 (16%), Positives = 133/363 (36%), Gaps = 18/363 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ + +++ + +S +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTLVLTTMMIRIVGFAASGEIDPRDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT +++E+++ ++G S IKP+ A + I + + Sbjct: 62 IMLVATLFVSILFVLTRWYKDSEMVVWLSSGVSLARFIKPIGIFATPIIILIMFFVFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFR-LDDDLYIKISKYNPN-NTLQGIFIVDSRD 180 P K + A+ Q S L F I K +P+ ++ +F+ + + Sbjct: 122 PWSNQQSKLIRARFQQRDEVSLLAPGQFRESPTTHRVFFIEKMSPDQGHVENVFVTST-E 180 Query: 181 TQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + +++G I+ + ++L +G + P D IM+F+ Y ++ +S Sbjct: 181 GGKVNVVVSKNGHIETHKNGDRFVVLENGRRYDGEPGHPDFRIMEFERYGVKIQSQPVVN 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA-DKR 296 ++ L NP N +EF R L + L++I A Sbjct: 241 TPTTTGLPTMTLLRNPTNENL-----------AEFAWRAGLPLIAINLMLLAIPLAHQNP 289 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R + + I L+ S + ++I + IL++ + I + + + Sbjct: 290 RRSRTINLVMAVLIYLTYSNLLNVVQAWIEQGKMSFGVGLVILHVIVLGIVAFIFWLRVR 349 Query: 357 KYT 359 Sbjct: 350 NRP 352 >gi|260772182|ref|ZP_05881099.1| predicted permease [Vibrio metschnikovii CIP 69.14] gi|260613049|gb|EEX38251.1| predicted permease [Vibrio metschnikovii CIP 69.14] Length = 367 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 55/339 (16%), Positives = 121/339 (35%), Gaps = 18/339 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + ++ + S ++L I +P + Sbjct: 2 IIVRYLIRETLKSQFAIFFVLFLVFLSQKFIRVLADASDGEIPARMILSIVALNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LAI+ S + + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLAIITSSAAAFNAFWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RD 180 P + QL + + L++ F R D + N LQ +F+ R Sbjct: 122 PWSQDKEAQLIEQLAAESSVDLLQKGQFQRSPDGSSVVFIDNIENRKLQNVFVAQLAPRQ 181 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + ++ SG + RQ I +++G + P D I +F Y + Sbjct: 182 SILPSVMFSDSGEVKELSDGRQMITMHNGVRYEGVPTRLDYMITRFDQYEGLIGQRSVKA 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L+ NP+ R + +E R++ L L++++ A Sbjct: 242 KGRDWQETPTLALIR----NPDSRAQ------AELQWRISLVLC---IPLLTMLVVPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 + ++ + + ++ I F S + +E I Sbjct: 289 VNPRQGRFAKMGPAILIYLTYFLTISAMKSALEDGTIPI 327 >gi|78067267|ref|YP_370036.1| YjgP/YjgQ like transporter [Burkholderia sp. 383] gi|77968012|gb|ABB09392.1| YjgP/YjgQ like transporter [Burkholderia sp. 383] Length = 363 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 61/365 (16%), Positives = 138/365 (37%), Gaps = 23/365 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ I +++ + +S +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTIMLTTMMIRIVGYAASGEIDPRDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT R++E+++ +G S LIKP+ A + + + + Sbjct: 62 VMLVVTLFVSILFVLTRWYRDSEMVVWLASGVSLTRLIKPIGVFATPIILLIAFFAFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNT-LQGIFIVDSRD 180 P K + A+ Q S L F + I K P+ + +Q +F+ + + Sbjct: 122 PWSNQQSKMIKARFQQRDEISLLAPGQFRESATNHRVFFIEKMTPDQSKVQNVFVTSTEN 181 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + +Q+G + + ++L DG + +P + IM+F+ Y ++ S + + Sbjct: 182 GKV-NVVVSQTGHTETRDGSRFVVLEDGRRYDGTPGQPNFKIMEFERYGVKITSTPVTNV 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + L NP +N +EF R L + ++ I Sbjct: 241 PTTNSTPTPDLLRNPTNDNL-----------AEFAWRAGLPLIAINLMVLGIP--LSYQN 287 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI----LYLFLFCISSIFLLMI 354 R+ + I+ + +++ I + + +IEQ + L+L + I + + Sbjct: 288 PRRSRTIN-LVMAVLIYLTYSNLLNVVQSQIEQGKMSFGVGLVGLHLVVAVIVAFIFWLR 346 Query: 355 KKKYT 359 + Sbjct: 347 VRNRP 351 >gi|306816677|ref|ZP_07450809.1| hypothetical protein ECNC101_08664 [Escherichia coli NC101] gi|305850242|gb|EFM50701.1| hypothetical protein ECNC101_08664 [Escherichia coli NC101] Length = 356 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 71/363 (19%), Positives = 141/363 (38%), Gaps = 18/363 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYASVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + + N L I + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIY-TS 179 Query: 180 DTQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 +I+ A+S + ++ ++L++G + +D + +++ L + Sbjct: 180 TANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHL-NPLDQ 238 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + +K ++++ L + +E R ++ L + + + R Sbjct: 239 SANVKRKAKSVTEL----------ARSVFPADHAELQWRQSRGLT--ALLMALLAISLSR 286 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 RQ + + ++L + G IP L+L + L+++ + Sbjct: 287 VKPRQGRFSTLLPLTLLFVAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMGLLMLVAR 346 Query: 357 KYT 359 ++ Sbjct: 347 DFS 349 >gi|296315184|ref|ZP_06865125.1| permease, YjgP/YjgQ family [Neisseria polysaccharea ATCC 43768] gi|296837908|gb|EFH21846.1| permease, YjgP/YjgQ family [Neisseria polysaccharea ATCC 43768] Length = 371 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 46/365 (12%), Positives = 143/365 (39%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ +++ + + + + ++ + Q + + + +++ +L + G+ + + P Sbjct: 2 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ ++ + + + + Sbjct: 62 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWVI 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLD---DDLYIKISKYNPNNTLQGIFIVDSR 179 P ++ + + S +E F L +Y + + ++ +F+ + Sbjct: 122 PWAELRSREYAEILKQKQELSLVEAGEFNSLGKRNGRVYFVETFNTESGIMKNLFLREQD 181 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE-SANSS 236 I +A+ G S++ +++ + L+DG + +P D + + F+ +L + Sbjct: 182 KNGNDNIIFAKEGNFSLNDNKRTLDLHDGYRYSGTPGKADYNRVSFQHLSLIISTTPKLI 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + L+ +R+E R++ + L+ ++A Sbjct: 242 DPVSHRRTIPTAQLI----------GSSNPQHRAELMWRISLTV---SVLLLCLLAVPLS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP--YYIPILYLFLFCISSIFLLMI 354 + + I I++ + G + + +E +++ +L + + +L+ Sbjct: 289 YFNPRSGHTYNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFVIAIVLLR 348 Query: 355 KKKYT 359 + Sbjct: 349 VRSMP 353 >gi|281180021|dbj|BAI56351.1| conserved hypothetical protein [Escherichia coli SE15] Length = 356 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 71/363 (19%), Positives = 141/363 (38%), Gaps = 18/363 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYASVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + + N L I + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIY-TS 179 Query: 180 DTQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 +I+ A+S + ++ ++L++G + +D + +++ L + Sbjct: 180 TANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHL-NPLDQ 238 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + +K ++++ L + +E R ++ L + + + R Sbjct: 239 SANVKRKAKSVTEL----------ARSVFPADHAELQWRQSRGLT--ALLMALLAISLSR 286 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 RQ + + ++L + G IP L+L + L+++ + Sbjct: 287 VKPRQGRFSTLLPLTLLFVAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMGLLMLVAR 346 Query: 357 KYT 359 ++ Sbjct: 347 DFS 349 >gi|261364965|ref|ZP_05977848.1| permease, YjgP/YjgQ family [Neisseria mucosa ATCC 25996] gi|288566762|gb|EFC88322.1| permease, YjgP/YjgQ family [Neisseria mucosa ATCC 25996] Length = 371 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 46/365 (12%), Positives = 149/365 (40%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ ++ + + + + ++ + Q + + + +++ +L + G+ + + P Sbjct: 2 IYQRNFIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ +I + + + + Sbjct: 62 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAILIAVMQLWVM 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLD--DDLYIKISKYN-PNNTLQGIFIVDSR 179 P ++ + + S +E F L + + ++ + ++ +F+ + Sbjct: 122 PWAELRSREYAEILKQKQELSMVEAGEFNSLGKRNGRVYFVETFDTESGIMKNLFLREQD 181 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE-SANSS 236 I +A+ G S++ +++ + L +G + +P D + + F++ +L + Sbjct: 182 KNGNDNIIFAKEGNFSLNDNKRTLDLRNGYRYSGTPGKADYNRVSFQNLSLIISTTPKLI 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V S L+ +NP ++ +E R++ + L+ ++A Sbjct: 242 DPVSHRRTIPTSQLIG--SSNPQHQ--------AELMWRISLTV---SVLLLCLLAVPLS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP--YYIPILYLFLFCISSIFLLMI 354 + + I +++ + G +++ + +E +++ +L + + + +L+ Sbjct: 289 YFNPRSGHTYNILVAIGLFLIYQNGLTFLRNAVEDGKIHFWLGLLPMHIIMFAIAVVLLR 348 Query: 355 KKKYT 359 + Sbjct: 349 VRSMP 353 >gi|256420369|ref|YP_003121022.1| permease YjgP/YjgQ family protein [Chitinophaga pinensis DSM 2588] gi|256035277|gb|ACU58821.1| permease YjgP/YjgQ family protein [Chitinophaga pinensis DSM 2588] Length = 478 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 38/244 (15%), Positives = 101/244 (41%), Gaps = 12/244 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + +++ F+ + +F+ + + + I+ + +++++ Y + Sbjct: 1 MKKLDKLLIKTFMGPFVATFFVTLFVLVMQFLWKYIDDLVGKGLDTPVIIELITYTSANL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + + ++ + EL+ + ++G S ++P+L + +++I F+ N Sbjct: 61 VSLALPLAVLLSSIMTFGNLGESFELVALKSSGISLTRFMRPLLAVCTMIAILAFLFNNY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 P K L + ++ +F+ D IK+++ +N T+ + I+D Sbjct: 121 AMPVANLRAKSLLYDITNSKPAFNIKAGVFYTDIPDYTIKVAEKEKDNKTIHQVMIIDHT 180 Query: 180 DTQTHKIYYAQSGS--IDLDRQAI--ILNDGEVH-----RKSPISKDISIMKFKSY--TL 228 K+ A+ G+ + D++ + +L G + R S ++ + F+ Y Sbjct: 181 PGGGDKVILAEKGTMLLSADKRFLYFVLEKGWRYEERNNRSSTTPGELIRLGFREYKKAF 240 Query: 229 QTES 232 S Sbjct: 241 DLSS 244 >gi|206561015|ref|YP_002231780.1| putative permease [Burkholderia cenocepacia J2315] gi|198037057|emb|CAR52978.1| putative permease protein [Burkholderia cenocepacia J2315] Length = 364 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 60/366 (16%), Positives = 139/366 (37%), Gaps = 24/366 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ I +++ + +S +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTIMLTTMMIRIVGYAASGEIDPRDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT R++E+++ +G S LIKP+ A + + + + Sbjct: 62 VMLVVTLFVSILFVLTRWYRDSEMVVWLASGVSLTRLIKPIGVFAAPIILLITFFAFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNT-LQGIFIVDSRD 180 P K + A+ Q S L F + I K +P+ + +Q +F+ + + Sbjct: 122 PWSNQQSKMIKARFQQRDEISLLAPGQFRESAANHRVFFIEKMSPDQSKVQNVFVTSTEN 181 Query: 181 TQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + +Q+G + + ++L DG + +P + IM+F+ Y ++ S + Sbjct: 182 GKV-NVVVSQTGHTETSKDGDRFVVLEDGRRYDGTPGQPNFKIMEFERYGVKITSKPVTN 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + L NP +N +EF R L + ++ I Sbjct: 241 VQTTNSTPTPDLLRNPTRDNL-----------AEFAWRAGLPLIAINLMVLGIP--LSYQ 287 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI----LYLFLFCISSIFLLM 353 R+ + I+ + +++ I + + +IEQ + L++ + I + + Sbjct: 288 NPRRSRTIN-LVMAVLIYLTYSNLLNVVQAQIEQGKMSFGVGLVGLHVIVAAIVAFIFWL 346 Query: 354 IKKKYT 359 + Sbjct: 347 RVRNRP 352 >gi|315179053|gb|ADT85967.1| hypothetical permease [Vibrio furnissii NCTC 11218] Length = 367 Score = 150 bits (378), Expect = 5e-34, Method: Composition-based stats. Identities = 48/334 (14%), Positives = 115/334 (34%), Gaps = 18/334 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L + + + ++ + S ++L I G +P + Sbjct: 2 IIVRYLIRETLKSQLAIFFVLFLVFLSQKFIRVLADASDGEIPARLILSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+L I+ S + + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLGIITSCLAGFNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RD 180 P + ++ + + + L++ F R D + N L +F+ R+ Sbjct: 122 PWSQDKVQSVMEQLAAENSVDLLQKGQFQRSPDGSSVVFIDNIENKKLSNVFVAQLTPRE 181 Query: 181 TQTHKIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + ++ +G + RQ I + +G + P D + KF Y Sbjct: 182 SILPSVMFSDAGDVKELSDGRQVITMYNGTRYEGVPTRVDYMVTKFDEYEGLIGQRAVKE 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 L+ + ++E R++ V L++++ A Sbjct: 242 KGRDWEAIPTLELV----------KNADRSAQAELQWRIS---LVVCIPLLTMLVVPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ 331 + ++ + + ++ I F S +E Sbjct: 289 VNPRQGRFAKMGPAILIYLTYFLAISATKSALED 322 >gi|149280024|ref|ZP_01886149.1| hypothetical protein PBAL39_24078 [Pedobacter sp. BAL39] gi|149229221|gb|EDM34615.1| hypothetical protein PBAL39_24078 [Pedobacter sp. BAL39] Length = 472 Score = 150 bits (378), Expect = 5e-34, Method: Composition-based stats. Identities = 50/263 (19%), Positives = 103/263 (39%), Gaps = 13/263 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + +L+ R F ++ ++FI + + + ++ + ++L++ Y Sbjct: 1 MKKIHVLLLKAFIRPFFVTFFIVMFILLMFFLFKYVDDLIGKGFEWYVILELMYYASAAN 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + ++ N EL+ I + G S + P+L L +SI F + Sbjct: 61 VSMALPLSILLSSIMTFGTLGENYELVAIKSAGISLQKAMMPLLVLITCISISSFFFSDY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVD-S 178 + PK L + ++E +F + I++ K + TL + I D + Sbjct: 121 MLPKANLKFGSLLWDIRNKKLSFLIKEGVFNSSIPNYSIRVDKKGADGVTLHNVMIYDHT 180 Query: 179 RDTQTHKIYYAQSGSIDLDRQAII--LNDGEVHRKSPIS-------KDISIMKFKSYT-- 227 + KI A+ G + D + ++ L DG + +S ++++ M+FK Sbjct: 181 SNNGIAKIIIAKEGKMASDDKYLLLKLKDGVRYEESSGKNASYNPRQELTRMRFKETDQK 240 Query: 228 LQTESANSSTIVLKANDQNLSFL 250 S N + N L Sbjct: 241 FDISSFNMKRTDEQGFRNNTQML 263 >gi|88803032|ref|ZP_01118559.1| putative permease [Polaribacter irgensii 23-P] gi|88781890|gb|EAR13068.1| putative permease [Polaribacter irgensii 23-P] Length = 482 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 56/250 (22%), Positives = 94/250 (37%), Gaps = 16/250 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL+ FL + L ++F+ + + Q ++ S + +LK Y ++ Sbjct: 1 MKILDKYILKTFLGPFLATFLIVLFVLVMQLLWQTFENIAGKGISFSFILKFLYYTSLSI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P P + + L S+ N E ++G S L++P++FL +LLS F+ N Sbjct: 61 VPQAMPIAVLLSSIMALGSLGENYEFAAAKSSGISLQRLVRPLIFLTLLLSGINFLFLNN 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKY--NPNNTLQGIFIVD- 177 I P + L + L F IK + N L+ + I D Sbjct: 121 IFPYAILKQQNLYYNIKKKKPALALIPGSFNSDLPGYQIKFDEKYGEEKNLLKNVLIYDL 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQ----AIILNDGEVHRKSPISKD---------ISIMKFK 224 S KI A+ G I + IL DG + + S FK Sbjct: 181 SSSKGNQKIITAKRGKIISEEGSRYMTFILYDGYYYEDHTKTTRSYSKKKNMPASQATFK 240 Query: 225 SYTLQTESAN 234 Y + ++ Sbjct: 241 EYEFNIDISD 250 Score = 38.4 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 14/104 (13%), Positives = 44/104 (42%), Gaps = 4/104 (3%) Query: 254 NPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLS 313 N + ++ + L + SE++ R+ +I I A +++R+ P+ ++++ Sbjct: 352 NVTSIKWKRKTLNFFDSEYYGRIALSFSCLILFFIG---APLGSIIRKGGFGLPMILAIA 408 Query: 314 ISFGVFWGFSYIIHKI-EQNPYYIPILYLFLFCISSIFLLMIKK 356 I F+G + + E + + ++ + + + ++ Sbjct: 409 IYVTYFFGNTMGKNLAEESSISAVLGSWISAMVMIPFGIFLTRR 452 >gi|258645769|ref|ZP_05733238.1| membrane protein, YjgP/YjgQ family [Dialister invisus DSM 15470] gi|260403140|gb|EEW96687.1| membrane protein, YjgP/YjgQ family [Dialister invisus DSM 15470] Length = 361 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 53/366 (14%), Positives = 122/366 (33%), Gaps = 18/366 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPT 59 M+ + YIL+ FL I +L+ + V+ S LKI +P Sbjct: 1 MRILDKYILKEFLGPFLFGVAAFTAIFLGADTLLKIADYVTKYGASSTAALKIFILALPR 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ P + + ++ ++EL+++ +G S L+ P+ L L+S+ Sbjct: 61 IIVYTFPMAVLLGALMATSRLSGSSELIVMRTSGQSFSRLVMPIFILTFLISLCAVAFNE 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD----LYIKISKYNPNN-TLQGIF 174 + P +Q+ + +++ R + + +YNP N L+ I Sbjct: 121 YVVPWTNRKYEQVINIEIKRNLNPGVTDHVILRDVQNGKIAHLLYARRYNPENKKLENIT 180 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIM---KFKSYTLQTE 231 I + ++ ++ A + + + +G ++ ++ +F Y E Sbjct: 181 IQEFQNEAVIRVENAPNAVWKDGK--WFMENGTIYDLGEDGISRTMRFKNQFIPYGQSPE 238 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 + + + L E E H+R + +F +V Sbjct: 239 TIQKEHKDYD--EMTIRELFTARKAYEA-AHEDATAIVMEIHRRFSLPFASFVF---GLV 292 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYI-IHKIEQNPYYIPILYLFLFCISSIF 350 A + +S+ I F + +++ + ++L Sbjct: 293 GAPLGVQRERSSSSIGFGLSVVIIFVYYAVMTFLEALGKGHVISAVAAVWLPNLIALICA 352 Query: 351 LLMIKK 356 + +IK+ Sbjct: 353 VYLIKR 358 >gi|255066291|ref|ZP_05318146.1| permease, YjgP/YjgQ family [Neisseria sicca ATCC 29256] gi|255049501|gb|EET44965.1| permease, YjgP/YjgQ family [Neisseria sicca ATCC 29256] Length = 371 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 45/365 (12%), Positives = 149/365 (40%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ ++ + + + + ++ + Q + + + +++ +L + G+ + + P Sbjct: 2 IYQRNFIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ ++ + + + + Sbjct: 62 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFALLIAVMQLWVM 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLD--DDLYIKISKYN-PNNTLQGIFIVDSR 179 P ++ + + S +E F L + + ++ + ++ +F+ + Sbjct: 122 PWAELRSREYAEILKQKQELSMVEAGEFNSLGKRNGRVYFVETFDTESGIMKNLFLREQD 181 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE-SANSS 236 I +A+ G S++ +++ + L +G + +P D + + F++ +L + Sbjct: 182 KNGNDNIIFAKEGNFSLNDNKRTLDLRNGYRYSGTPGKADYNRVSFQNLSLIISTTPKLI 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V S L+ +NP ++ +E R++ + L+ ++A Sbjct: 242 DPVSHRRTIPTSQLIG--SSNPQHQ--------AELMWRISLTV---SVLLLCLLAVPLS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP--YYIPILYLFLFCISSIFLLMI 354 + + I +++ + G +++ + +E +++ +L + + + +L+ Sbjct: 289 YFNPRSGHTYNILVAIGLFLIYQNGLTFLRNAVEDGKIHFWLGLLPMHIIMFAIAVVLLR 348 Query: 355 KKKYT 359 + Sbjct: 349 VRSMP 353 >gi|117618567|ref|YP_858153.1| putative permease [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559974|gb|ABK36922.1| putative permease [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 368 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 56/346 (16%), Positives = 118/346 (34%), Gaps = 18/346 (5%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ R ++ L ++ I Q +Q I + ++ + +P + ++ Sbjct: 5 RYLFRETLKTQLAVLFVLLLIFVSQQFIQIIGDAADGEVPTRLVSTLLLLNLPNMALLML 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + + +E+ ++ G S +++ + LA+L + + + P+ Sbjct: 65 PISLFLAILFAHGRLYAESEMTVMHAVGFSHRFVMRSAMVLALLTAAVAAFNTGWVAPQA 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNT-LQGIFIVDS-RDTQ 182 + Q+ + + S+L+ F LD L I N + LQ IF++ +D + Sbjct: 125 KEREYQVIDEFKADPGISFLQAGRFMELDKGRLVAYIQDLNDKGSKLQKIFVLQRSQDGK 184 Query: 183 THKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + A G + +D + L DG + ++ I +F Y+L Sbjct: 185 PPSVVVATEGVVTVDSNGLQWLTLKDGSRYEGHFNTRQFQISEFDEYSLVIRQQEMERSN 244 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 KA + LL N +E RL+ L ++ + + A R Sbjct: 245 RKAAAKPTMELLGTQDNQLM----------AELQWRLSLPLSILVLTFLVVPLA--RVNP 292 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC 345 RQ + + L + + P ++L Sbjct: 293 RQGRYAKLLPAILLYLSYFLLLSAARSAIDSGRLPHWPGMFLVPLV 338 >gi|262170557|ref|ZP_06038235.1| predicted permease [Vibrio mimicus MB-451] gi|261891633|gb|EEY37619.1| predicted permease [Vibrio mimicus MB-451] Length = 366 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 56/364 (15%), Positives = 124/364 (34%), Gaps = 19/364 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + ++ + S +++L I G +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASDGEIPTSMILSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LA++ + + + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RD 180 P + QL + + L++ F R D + N L +F+ RD Sbjct: 122 PWSQDKEAQLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLHNVFVAQLAPRD 181 Query: 181 TQTHKIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + ++ SG + RQ I L +G + P D I F SY + Sbjct: 182 SILPSVMFSNSGDVKELSDGRQIITLYNGTRYEGVPTRVDYMITNFDSYDGLIGQREVKS 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 LL ++E RL+ V L++++ A Sbjct: 242 SGRDWEALPTLSLL----------KNSDLQAQAELQWRLS---LVVCIPLLTMLVVPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ + + ++ I F S ++ I+ L+ + + ++ Sbjct: 289 VNPRQGRFAKMGPAILIYLTYFLALS-ATKSAIEDGSLPVIIGLWPVNAALLIAALVVNT 347 Query: 358 YTKI 361 I Sbjct: 348 MDSI 351 >gi|332754457|gb|EGJ84823.1| hypothetical protein SF274771_3587 [Shigella flexneri 2747-71] Length = 356 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 77/370 (20%), Positives = 139/370 (37%), Gaps = 32/370 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + +N L I + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIY-TS 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +I+ A GS+D+ SP + + +Y L + + + + Sbjct: 180 TANRTRIFRA--GSVDVVDP------------SPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLE----------TYRSEFHKRLTQWLFPVIFGLIS 289 +NL LNP +PN + + +E R ++ L + Sbjct: 226 Y----RNLQLHLNPLDQSPNVKRKAKSVTELARSAFPADHAELQWRQSRGLT--ALLMAL 279 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 + + R RQ + + ++L + IP L+L + Sbjct: 280 LAISLSRVKPRQGRFSTLLPLTLLFIAIFYGCDVCRTLVANGAIPLIPGLWLVPGLMLMG 339 Query: 350 FLLMIKKKYT 359 L+++ + ++ Sbjct: 340 LLILVARDFS 349 >gi|319776036|ref|YP_004138524.1| permease [Haemophilus influenzae F3047] gi|329123194|ref|ZP_08251763.1| inner membrane protein YjgP [Haemophilus aegyptius ATCC 11116] gi|317450627|emb|CBY86847.1| Predicted permease [Haemophilus influenzae F3047] gi|327471539|gb|EGF16983.1| inner membrane protein YjgP [Haemophilus aegyptius ATCC 11116] Length = 367 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 125/356 (35%), Gaps = 17/356 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + +S + L ++ I + Q ++ + ++ +++ + G +P + Sbjct: 2 ILIRYLIKEVFKSQIAILLILLLIFFSQQFVRVLGAAANGNVPADLVFSLLGLGMPIMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P C + + +E+ ++ G + L+K L +++L + + + Sbjct: 62 LMLPLCLFIAILLTFGRLYAESEITVMRACGVGQRILVKVALIMSLLTAGIAAYNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RD 180 P + A+ T L F +++ + +N ++ +++ + Sbjct: 122 PWAIQKQVNMVEDAKANPTVGVLSSGQFISTNNNNVVLFIDKIKDNQIRNVYLFQMTPQK 181 Query: 181 TQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G + Q + L + + + D I F Y ++ Sbjct: 182 QTKPSVITAEKGELIALPSGDQVLNLKNTKRVEGTSALPDFRITHFDEYHAYLGYQSAEN 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + LS L++ + ++ ++E H R+T L + LI++ R Sbjct: 242 TNDEVAELTLSQLIDLDSSSA----------KAELHWRITLILAVPLMALIAVP--LSRV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 RQ + + L S+ ++ L + +++ Sbjct: 290 NPRQGRFAKILPALLLYLIYFLLQSSFKSAGSAGKLEAELLMPLVNIGFFLLAVVL 345 >gi|191172497|ref|ZP_03034037.1| putative permease, YjgP/YjgQ family [Escherichia coli F11] gi|300993119|ref|ZP_07180205.1| hypothetical protein HMPREF9553_04259 [Escherichia coli MS 200-1] gi|190907165|gb|EDV66764.1| putative permease, YjgP/YjgQ family [Escherichia coli F11] gi|300305134|gb|EFJ59654.1| hypothetical protein HMPREF9553_04259 [Escherichia coli MS 200-1] gi|324011925|gb|EGB81144.1| hypothetical protein HMPREF9533_04083 [Escherichia coli MS 60-1] Length = 356 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 71/363 (19%), Positives = 141/363 (38%), Gaps = 18/363 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYASVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + + N L I + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIY-TS 179 Query: 180 DTQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 +I+ A+S + ++ ++L++G + +D + +++ L + Sbjct: 180 TANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHL-NPLDQ 238 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + +K ++++ L + +E R ++ L + + + R Sbjct: 239 SANVKRKAKSVTEL----------ARSVFPADHAELQWRQSRGLT--ALLMALLAISLSR 286 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 RQ + + ++L + G IP L+L + L+++ + Sbjct: 287 LKPRQGRFSTLLPLTLLFVAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMGLLMLVAR 346 Query: 357 KYT 359 ++ Sbjct: 347 DFS 349 >gi|170697653|ref|ZP_02888741.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria IOP40-10] gi|170137401|gb|EDT05641.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria IOP40-10] Length = 363 Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 60/365 (16%), Positives = 138/365 (37%), Gaps = 23/365 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ I +++ + +S +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTIMLTTMMIRIVGYAASGEIDPRDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT R++E+++ +G S LIKP+ A + + + + Sbjct: 62 VMLVVTLFVSILFVLTRWYRDSEMVVWLASGVSLTRLIKPIGVFATPIILLIAFFAFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNT-LQGIFIVDSRD 180 P K + A+ Q S L F + I K P+ + +Q +F+ + + Sbjct: 122 PWSNQQSKMIKARFQQRDEISLLAPGQFRESASNHRVFFIEKMAPDQSKVQNVFVTSTEN 181 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + I + +G + + ++L DG + +P + IM+F+ Y ++ S + + Sbjct: 182 GKV-NIVVSHTGHTETKDGDRFVVLEDGRRYDGTPGQPNFKIMEFQRYGVKITSTPVTNV 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + L NP +N +EF R L + ++ I Sbjct: 241 PTTNSTPTPDLLRNPTRDNL-----------AEFAWRAGLPLIAINLMVLGIP--LSYQN 287 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI----LYLFLFCISSIFLLMI 354 R+ + I+ + +++ I + + +IEQ + L++ + I ++ + Sbjct: 288 PRRSRTIN-LVMAVLIYLTYSNLLNVVQAQIEQGKMSFGVGLVGLHVIVAAIVALIFWLR 346 Query: 355 KKKYT 359 + Sbjct: 347 VRNRP 351 >gi|253991457|ref|YP_003042813.1| inner membrane protein yjgp [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782907|emb|CAQ86072.1| inner membrane protein yjgp [Photorhabdus asymbiotica] Length = 366 Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 59/365 (16%), Positives = 143/365 (39%), Gaps = 27/365 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + N+++ + G +P + Sbjct: 2 IIIRYLVRETLKSQVAILFILLLIFFCQRLVEILGAAVEGNVPANLVISLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + + +E+ ++ G + L+ L LA+L S ++ + Sbjct: 62 LILPLSLFLGVLMTFSKLYTESEITVMHACGLGKRVLVVSALILALLTSALAAVNVIWMM 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNTLQGIFIVDSR-- 179 P +Q+ A A+ + + + E F +D L + I + + + +F+ R Sbjct: 122 PWSSKYQEQVLADARANPSLAAIMEGKFKPSNDGNLVLYIGSVHGD-KFKNVFLAQLRPV 180 Query: 180 DTQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 D Q + + G + +Q +ILN G + + + +D I +F Y S Sbjct: 181 DNQRPSVVISDGGHMVERPDGKQVVILNHGTRYEGTAMLRDFRITEFNDYQAVVGHQASV 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 K ++++ L N + R+EFH RLT L +I ++ + Sbjct: 241 VDGDKVEQKSIAQLWRDNDKDS----------RAEFHWRLTLVLSVLIMAMMVVP--LSV 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFLFCISSIFLLM 353 RQ + +S+ + ++ F + + N P+++++ + + L + Sbjct: 289 VNPRQGR-----VLSMLPAMLLYLIFFLLQSSLRSNGGKGKLDPLIWMWTVNGAYLMLAL 343 Query: 354 IKKKY 358 + + Sbjct: 344 VLNIW 348 >gi|241760314|ref|ZP_04758409.1| permease, YjgP/YjgQ family [Neisseria flavescens SK114] gi|319637672|ref|ZP_07992438.1| hypothetical protein HMPREF0604_00061 [Neisseria mucosa C102] gi|241319192|gb|EER55670.1| permease, YjgP/YjgQ family [Neisseria flavescens SK114] gi|317400827|gb|EFV81482.1| hypothetical protein HMPREF0604_00061 [Neisseria mucosa C102] Length = 371 Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 47/365 (12%), Positives = 146/365 (40%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ ++ + + + + ++ + Q + + + +++ +L + G+ + + P Sbjct: 2 IYQRNFIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ +I + + + + Sbjct: 62 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAILIAVMQLWVM 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLD--DDLYIKISKYN-PNNTLQGIFIVDSR 179 P ++ + + S +E F L + + ++ + ++ +F+ + Sbjct: 122 PWAELRSREYAEILKQKQELSLVEAGEFNNLGKRNGRVYFVETFDTESGIMKNLFLREQD 181 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE-SANSS 236 I +A+ G S+ +++ + L DG + +P D + + F+ +L + Sbjct: 182 KNGNDNIVFAKEGNFSLTDNKRTLELRDGYRYSGTPGKADYNRVSFQHLSLIISTTPKLI 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + L+ +NP ++ +E R++ + L+ ++A Sbjct: 242 DPVSHRRTIPTAQLIG--SSNPQHQ--------AELMWRISLTV---SVLLLCLLAVPLS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP--YYIPILYLFLFCISSIFLLMI 354 + + I I++ + G +++ + +E +++ +L + + +L+ Sbjct: 289 YFNPRSGHTYNILIAIGLFLVYQNGLTFLRNAVEDGKIHFWLGLLPMHIIMFVIAVVLLR 348 Query: 355 KKKYT 359 + Sbjct: 349 VRSMP 353 >gi|331659262|ref|ZP_08360204.1| putative permease [Escherichia coli TA206] gi|315297643|gb|EFU56920.1| conserved hypothetical protein [Escherichia coli MS 16-3] gi|331053844|gb|EGI25873.1| putative permease [Escherichia coli TA206] Length = 356 Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 71/363 (19%), Positives = 141/363 (38%), Gaps = 18/363 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYASVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + + N L I + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIY-TS 179 Query: 180 DTQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 +I+ A+S + ++ ++L++G + +D + +++ L + Sbjct: 180 TANRTRIFRARSVDVVDLSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHL-NPLDQ 238 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + +K ++++ L + +E R ++ L + + + R Sbjct: 239 SANVKRKAKSVTEL----------ARSVFPADHAELQWRQSRGLT--ALLMALLAISLSR 286 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 RQ + + ++L + G IP L+L + L+++ + Sbjct: 287 VKPRQGRFSTLLPLTLLFVAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMGLLMLVAR 346 Query: 357 KYT 359 ++ Sbjct: 347 DFS 349 >gi|78186598|ref|YP_374641.1| hypothetical protein Plut_0723 [Chlorobium luteolum DSM 273] gi|78166500|gb|ABB23598.1| conserved hypothetical protein [Chlorobium luteolum DSM 273] Length = 442 Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 47/240 (19%), Positives = 96/240 (40%), Gaps = 6/240 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL+ + F ++ L I+F+ + + L+++ + Sbjct: 1 MKIIDRYILKSLVGPFFLAFLTIMFVLILQFFANFADRFIGRGIDFMSLIELLALQSAWM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + S+ +E+ + +G S L+ PV+ + LLS+ + N+ Sbjct: 61 VGLAAPMAVLIGVVMAFGSLTTTSEMTVFRASGLSLYRLMLPVVIVGFLLSLLVERFNNV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 ++P+ + + L + A + EN F L D I + + ++ I I D+ Sbjct: 121 VQPQVKYKARSLMSDIAKAKPTFGITENAFSPLVDGYSILVQHADEKTGSIGDIIIYDAT 180 Query: 180 DTQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKS-PISKDISIMKFKSYTLQTESAN 234 + A+ G ID ++L+DG++H P + M+F + ES Sbjct: 181 RKDYRSVITAKDGVIDFSADGRYLVMMLSDGQIHEVQVPGHRLYRKMEFDRHRFVFESTG 240 Score = 38.4 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 33/88 (37%), Gaps = 4/88 (4%) Query: 264 LLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFS 323 L Y +E+HK+ +F LI A L R+ +SL + F ++W Sbjct: 342 LYNRYMAEYHKKYALAFACFVFVLIG---APLGVLARRGGFGIGAVLSL-LFFVLYWVLM 397 Query: 324 YIIHKIEQNPYYIPILYLFLFCISSIFL 351 + + P + +++ + + Sbjct: 398 ITGENMAEWGVLPPAVAIWMADVVIAVI 425 >gi|261377636|ref|ZP_05982209.1| permease, YjgP/YjgQ family [Neisseria cinerea ATCC 14685] gi|269146390|gb|EEZ72808.1| permease, YjgP/YjgQ family [Neisseria cinerea ATCC 14685] Length = 371 Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 46/365 (12%), Positives = 149/365 (40%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ ++ + + + + ++ + Q + + + +++ +L + G+ + + P Sbjct: 2 IYQRNFIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ +I + + + + Sbjct: 62 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAILIAVMQLWVM 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLD--DDLYIKISKYN-PNNTLQGIFIVDSR 179 P ++ + + S +E F L + + ++ + ++ +F+ + Sbjct: 122 PWAELRSREYAEILKQKQELSMVEAGEFNSLGKRNGRVYFVETFDTESGIMKNLFLREQD 181 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE-SANSS 236 I +A+ G S++ +++ + L +G + +P D + + F++ +L + Sbjct: 182 KNGKDNIIFAKEGNFSLNDNKRTLDLRNGYRYSGTPGKADYNRVSFQNLSLIISTTPKLI 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V S L+ +NP ++ +E R++ + L+ ++A Sbjct: 242 DPVSHRRTIPTSQLIG--SSNPQHQ--------AELMWRISLTV---SVLLLCLLAVPLS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP--YYIPILYLFLFCISSIFLLMI 354 + + I +++ + G +++ + +E +++ +L + + + +L+ Sbjct: 289 YFNPRSGHTYNILVAIGLFLIYQNGLTFLRNAVEDGKIHFWLGLLPMHIIMFAIAVVLLR 348 Query: 355 KKKYT 359 + Sbjct: 349 VRSMP 353 >gi|309378516|emb|CBX22869.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 371 Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 48/365 (13%), Positives = 148/365 (40%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ +++ + + + + ++ + Q + + + +++ +L + G+ I + P Sbjct: 2 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWIIGMTP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ ++ + + + + Sbjct: 62 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWVM 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLD--DDLYIKISKYN-PNNTLQGIFIVDSR 179 P ++ + + S +E F L + + ++ + ++ +F+ + Sbjct: 122 PWAELRSREYAEILKQKQELSLVEAGRFNTLGKRNGRVYFVETFDTESGIMKNLFLREQD 181 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE-SANSS 236 I +A+ G S++ +++A+ L DG + +P D + + F+ +L + Sbjct: 182 KNGNDNIIFAKEGNFSLNNNKRALELRDGYRYSGTPGKADYNRVSFRHLSLIISTTPKLI 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + L+ +NP ++ +E R++ + L+ ++A Sbjct: 242 DPVSHRRTIPTAQLIG--SSNPQHQ--------AELMWRISLTV---SVLLLCLLAVPLS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP--YYIPILYLFLFCISSIFLLMI 354 + + I I++ + G + + +E +++ +L + + + +L+ Sbjct: 289 YFNPRGGHTYNILIAIGLFLIYQNGLTLLFEAVENGKIHFWLGLLPMHIIMFAVALILLR 348 Query: 355 KKKYT 359 + Sbjct: 349 VRSMP 353 >gi|261401002|ref|ZP_05987127.1| permease, YjgP/YjgQ family [Neisseria lactamica ATCC 23970] gi|269209119|gb|EEZ75574.1| permease, YjgP/YjgQ family [Neisseria lactamica ATCC 23970] Length = 371 Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 47/365 (12%), Positives = 147/365 (40%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ +++ + + + + ++ + Q + + + +++ +L + G+ I + P Sbjct: 2 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWIIGMTP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ ++ + + + + Sbjct: 62 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWVM 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLD--DDLYIKISKYN-PNNTLQGIFIVDSR 179 P ++ + + S +E F L + + ++ + ++ +F+ + Sbjct: 122 PWAELRSREYAEILKQKQELSLVEAGRFNTLGKRNGRVYFVETFDTESGIMKNLFLREQD 181 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE-SANSS 236 I +A+ G S++ +++ + L DG + +P D + + F+ +L + Sbjct: 182 KNGNDNIIFAKEGNFSLNDNKRTLELRDGYRYSGTPGKADYNRVSFRHLSLIISTTPKLI 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + L+ +NP ++ +E R++ + L+ ++A Sbjct: 242 DPVSHRRTIPTAQLIG--SSNPQHQ--------AELMWRISLTV---SVLLLCLLAVPLS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP--YYIPILYLFLFCISSIFLLMI 354 + + I I++ + G + + +E +++ +L + + + +L+ Sbjct: 289 YFNPRGGHTYNILIAIGLFLIYQNGLTLLFEAVENGKIHFWLGLLPMHIIMFAVALILLR 348 Query: 355 KKKYT 359 + Sbjct: 349 VRSMP 353 >gi|229513427|ref|ZP_04402891.1| hypothetical protein VCB_001072 [Vibrio cholerae TMA 21] gi|229349304|gb|EEO14260.1| hypothetical protein VCB_001072 [Vibrio cholerae TMA 21] Length = 366 Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 55/347 (15%), Positives = 119/347 (34%), Gaps = 19/347 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + ++ + S +++L I G +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASDGEIPTSMILSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LA++ + + + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RD 180 P + L + + L++ F R D + N L +F+ RD Sbjct: 122 PWSQDKEAHLMDQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLYNVFVAQLAPRD 181 Query: 181 TQTHKIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + ++ SG + RQ I L DG + P D I F SY + Sbjct: 182 SILPSVMFSHSGDVKELSDGRQIITLYDGTRYEGVPTRVDYMITNFDSYDGLIGQREVKS 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 LLN ++E R++ V L++++ A Sbjct: 242 AERDWEALPTLSLLN----------NADRRAQAELQWRIS---LVVCIPLLTMLVVPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 + ++ + + ++ I F S ++ I+ L+ Sbjct: 289 VNPRQGRFAKMGPAILIYLTYFLALS-ATKSAIEDGSLPVIIGLWPI 334 >gi|262166531|ref|ZP_06034268.1| predicted permease [Vibrio mimicus VM223] gi|262026247|gb|EEY44915.1| predicted permease [Vibrio mimicus VM223] Length = 366 Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats. Identities = 56/364 (15%), Positives = 124/364 (34%), Gaps = 19/364 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + ++ + S +++L I G +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASDGEIPTSMILSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LA++ + + + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASIAAFNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RD 180 P + QL + + L++ F R D + N L +F+ RD Sbjct: 122 PWSQDKEAQLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLHNVFVAQLAPRD 181 Query: 181 TQTHKIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + ++ SG + RQ I L +G + P D I F SY + Sbjct: 182 SILPSVMFSNSGDVKELSDGRQIITLYNGTRYEGVPTRVDYMITNFDSYDGLIGQREVKS 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 LL ++E RL+ V L++++ A Sbjct: 242 SGRDWEALPTLSLL----------KNSDLQAQAELQWRLS---LVVCIPLLTMLVVPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ + + ++ I F S ++ I+ L+ + + ++ Sbjct: 289 VNPRQGRFAKMGPAILIYLTYFLALS-ATKSAIEDGSLPVIVGLWPVNAALLIAALVVNT 347 Query: 358 YTKI 361 I Sbjct: 348 MDSI 351 >gi|238921310|ref|YP_002934825.1| hypothetical protein NT01EI_3454 [Edwardsiella ictaluri 93-146] gi|238870879|gb|ACR70590.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 366 Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats. Identities = 56/348 (16%), Positives = 134/348 (38%), Gaps = 25/348 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + V + N++ + G IP + Sbjct: 2 IIIRYLVRETVKSQVAILFILLLIFFCQKMVRILGAVVNGDIPTNLVFSLLGLGIPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA + ++ + Sbjct: 62 LILPLSLFLGLLMTLGRLYTESEITVMHACGLSKAVLVKAAMVLAFITGALALVNAFWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD-- 180 P ++ A+A+ + L E F D Y+ + Q +F+ R Sbjct: 122 PWSSLHSDEVMAEARANPGLASLAEGQFQSSQDGNYVLFVGNVKDKKFQNVFLAQLRPSG 181 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 +Q + A SG + Q ++L+ G + + + +D I F Y+ ++ Sbjct: 182 SQRPSVVVADSGHLVEMKDGAQKVVLDSGTRYEGTAMLRDFRITDFVDYSAIIGHKSAML 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 A+ ++ L + + +R+EFH RLT ++ L+ + Sbjct: 242 DPNNADQASMEALWHSQEPS----------FRAEFHWRLTLVFSVIVMALMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLF 342 RQ + +S+ + ++ F + + N P+++++ Sbjct: 290 NPRQGR-----VLSMLPAMLLYLIFFLLQSSLRSNGGKDKLDPMIWMW 332 >gi|148546262|ref|YP_001266364.1| permease YjgP/YjgQ family protein [Pseudomonas putida F1] gi|148510320|gb|ABQ77180.1| permease YjgP/YjgQ family protein [Pseudomonas putida F1] Length = 383 Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats. Identities = 50/318 (15%), Positives = 116/318 (36%), Gaps = 23/318 (7%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ R + + ++ I + ++ + + +L I G+ +P L ++ Sbjct: 17 RYLSREVLVTLSAVSAVLLVIIMSGRFIKYLAQAAQGVLDPGVLFLIMGFRLPGFLQLIL 76 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + + +E+ ++ TG S+ L+ + A L+++ + + P Sbjct: 77 PLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLLGMTMAPAALVALLVAWLSLSLAPLG 136 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNT-LQGIFIVDSR---- 179 + ++Q+ ++ F L F L D + + + L G+FI + R Sbjct: 137 VAQVQQIISQQDALTEFDTLVPGRFQTLRDGSRVTYTEQLSDDRINLGGVFISEKRFNQD 196 Query: 180 --DTQTHKIYYAQSGS--IDLDRQ-AIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + + A+ G I D ++L +G + +P D +K+ +Y + Sbjct: 197 KTKDRAPSVLVAEKGHQEIQADGNRYLVLENGYRYDGNPGQADYRAIKYDTYGVLLPKPE 256 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + V + S L+ + R+E RL+ + + L+++ Sbjct: 257 VAEEVTEREALPTSELI----------GKEGLRERAELQWRLSLPILVFVVTLLAVP--L 304 Query: 295 KRALVRQRKKIHPIFISL 312 R RQ + + + L Sbjct: 305 SRVNPRQGRFLKLLPAIL 322 >gi|217077925|ref|YP_002335643.1| putative permease, YjgP/YjgQ family [Thermosipho africanus TCF52B] gi|217037780|gb|ACJ76302.1| putative permease, YjgP/YjgQ family [Thermosipho africanus TCF52B] Length = 1110 Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats. Identities = 58/354 (16%), Positives = 124/354 (35%), Gaps = 5/354 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YIL+ FLM + A V + Q +++ + L ++ Y +P Sbjct: 1 MKVLTKYILKLSLGPFLMGIGAFIVFASVELLYQLSDIIVRHRVGILKLFELIYYNLPYF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P VL+ + + E+ G L+ P L L+I+ F + Sbjct: 61 ASLGIPVGILFSIFWVLSQLYSSKEITAFLVHGIPSRKLVYPFLILSIIFGAVSFYLNDQ 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 I PK + +K ++EN+ ++D+ Y + +Y+ L + + + Sbjct: 121 IVPKFNQKAMETISKYVYKKPEVTIKENVLTKIDESQYFFVKRYDQQQGILYDVVLFQNM 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 ++ I A+ ++ + + L +G+++ + F L + S + Sbjct: 181 QSEER-IITAKK--VEKEENSWYLINGKMYVTDRDGFMKLDLSFSKIKLDLKDDLESLMR 237 Query: 240 LKANDQNLS-FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + + ++++ L + E H R + P I ++ + + L Sbjct: 238 VGKSPRDMTGEELIQKIKTFKKLGVDPSPWIVELHGRYANSVGPFIIVILGVPLSLLFGL 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 + + F+ + + G S + + NP LF I L Sbjct: 298 KSKSWSVIFTFVIVVLYQGSGAWLSAMGKENLINPVLAAWYPDLLFAIVGFILF 351 >gi|153801086|ref|ZP_01955672.1| membrane protein, putative [Vibrio cholerae MZO-3] gi|124123319|gb|EAY42062.1| membrane protein, putative [Vibrio cholerae MZO-3] Length = 354 Score = 148 bits (375), Expect = 9e-34, Method: Composition-based stats. Identities = 55/347 (15%), Positives = 119/347 (34%), Gaps = 19/347 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + ++ + S +++L I G +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASDGEIPTSMILSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LA++ + + + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RD 180 P + L + + L++ F R D + N L +F+ RD Sbjct: 122 PWSQDKEAHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLYNVFVAQLAPRD 181 Query: 181 TQTHKIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + ++ SG + RQ I L DG + P D I F SY + Sbjct: 182 SILPSVMFSHSGDVKELSDGRQIITLYDGTRYEGVPTRVDYMITNFDSYDGLIGQREVKS 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 LLN ++E R++ V L++++ A Sbjct: 242 AERDWEALPTLSLLN----------NADRRAQAELQWRIS---LVVCIPLLTMLVVPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 + ++ + + ++ I F S ++ I+ L+ Sbjct: 289 VNPRQGRFAKMGPAILIYLTYFLALS-ATKSAIEDGSLPVIIGLWPI 334 >gi|237811281|ref|YP_002895732.1| permease YjgP/YjgQ family protein [Burkholderia pseudomallei MSHR346] gi|254181440|ref|ZP_04888037.1| putative membrane protein [Burkholderia pseudomallei 1655] gi|184211978|gb|EDU09021.1| putative membrane protein [Burkholderia pseudomallei 1655] gi|237503123|gb|ACQ95441.1| permease YjgP/YjgQ family protein [Burkholderia pseudomallei MSHR346] Length = 365 Score = 148 bits (375), Expect = 9e-34, Method: Composition-based stats. Identities = 57/365 (15%), Positives = 135/365 (36%), Gaps = 22/365 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ I +++ + +S + +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTIMLTSMMIRIVGYAASGEVNPKDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M+ + VLT +++E+++ +G S LIKP+ A + I + + Sbjct: 62 MILVGTLFVSILFVLTRWYKDSEMVVWLASGVSLTRLIKPIGVFATPIVILIAFFAFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNN-TLQGIFIVDSRD 180 P K + A+ Q S L F + I K +P+ +Q +F+ + Sbjct: 122 PWSNQQSKLIKARFQQRDEVSLLAPGQFRESAANHRVFFIEKMSPDQAKVQNVFVTTTEQ 181 Query: 181 TQTHKIY--YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + + + ++ + I+L +G + P + IM+F+ Y ++ +S + Sbjct: 182 GKVNVVVSQTGHTETMKNGDRFIVLENGRRYDGVPGQPNFKIMEFERYGVKIQSKQIVSQ 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 L NP N +EF R L + +++I A Sbjct: 242 PTTTGTSTPDLLRNPTNQNL-----------AEFAWRAGLPLIAINLMILAIPLA---YQ 287 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI----LYLFLFCISSIFLLMI 354 +R + + +++ I + + ++E+ + L++ + I ++ + Sbjct: 288 NPRRGRTVNLVMAVLIYLTYSNLLNVVQSQMERGKIAFGLGLIGLHVIVAGIVALLFWLR 347 Query: 355 KKKYT 359 + Sbjct: 348 VRNRP 352 >gi|15602061|ref|NP_245133.1| hypothetical protein PM0196 [Pasteurella multocida subsp. multocida str. Pm70] gi|12720419|gb|AAK02280.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] Length = 368 Score = 148 bits (375), Expect = 9e-34, Method: Composition-based stats. Identities = 44/306 (14%), Positives = 114/306 (37%), Gaps = 17/306 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + +S L ++ I + Q+++ + +S ++++ + G +PT+ Sbjct: 2 ILTRYLTKEVLKSQLAILFILLLIFFCQQLVRVLGSAASGKVPADLVMSLLGLGMPTMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P C + + +E+ ++ G + L++ VL L++ + + + Sbjct: 62 LMLPLCLFIAILLTFGRLYAESEITVMRACGVGQKILVRVVLILSLFTASIAAYNVFWLT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+ T L F +++ ++ +NT+ +++ +R+ Sbjct: 122 PWAIQKQSEILEGAKANPTMGALASGQFINTNNNEFVLFIDSIKDNTIHDVYVFQTRERG 181 Query: 183 T--HKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G + Q + L + + S D I F+ Y + + Sbjct: 182 NLKPSVLVAEKGELQALPNGDQILKLENSQRVEGSSAFPDFRITHFEEYQAYLGYQDKNN 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + L+ ++E + RL+ L + LI++ R Sbjct: 242 DEQETEELGFWDLM----------KTHTPAAKAELNWRLSLILAVPLMALIAVP--LSRV 289 Query: 298 LVRQRK 303 RQ + Sbjct: 290 NPRQGR 295 >gi|78356991|ref|YP_388440.1| permease [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219396|gb|ABB38745.1| permease, putative [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 397 Score = 148 bits (375), Expect = 1e-33, Method: Composition-based stats. Identities = 56/368 (15%), Positives = 131/368 (35%), Gaps = 17/368 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + + + + F + ++ + + ++LQ L + + + YL P Sbjct: 10 ITLLQKQLFKELVSLFGLCLGSLLSLILIGRMLQLRELFLGLDLNALDMATLFVYLSPLF 69 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + M+ + EL+ + G S L+ L +L + Sbjct: 70 LTLIIPIACMLSVFLAFLRMSTDRELVALKAGGLSLFQLLPAPLLFCLLCGLLNLYISLS 129 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSR 179 + + L+ +F + L + + + L + + D+ Sbjct: 130 GVAWGMGNFRHTIMEIANTRAKIVLQPGVFNQTVPGLTVFARTVDNSSGKLGHVLVEDNS 189 Query: 180 DTQTHKIYYAQSGSIDLDRQ----AIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 +T + A G + D Q IL++G+++R+ +S++ F YT++ + Sbjct: 190 RDETSILILAPRGQLRSDEQRGELVFILHNGKIYRQQED--SVSVLDFNDYTVRLDLGQI 247 Query: 236 ----STIVLKANDQNLSFLLNPNPNNPNYRP--ELLETYRSEFHKRLTQWLFPVIFGLIS 289 S +K + + S L + P++P R L E KR W+ P+ ++ Sbjct: 248 FKGVSLGKVKPKELSWSELRSIGPDHPEARRDSNFLRKVHVELQKR---WVLPMACLVLG 304 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISS 348 + A + K I ++L + + S + E + L++ + Sbjct: 305 LFAMPLACAFQGLDKQFGILLALGMFLIYYTMLSVGLSTGESGTVPPAVGLWMPNLIFLA 364 Query: 349 IFLLMIKK 356 + L + + Sbjct: 365 VGLFWLDR 372 >gi|283833700|ref|ZP_06353441.1| permease YjgP/YjgQ [Citrobacter youngae ATCC 29220] gi|291071386|gb|EFE09495.1| permease YjgP/YjgQ [Citrobacter youngae ATCC 29220] Length = 356 Score = 148 bits (375), Expect = 1e-33, Method: Composition-based stats. Identities = 65/361 (18%), Positives = 138/361 (38%), Gaps = 19/361 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ E YI+ + R + F++FI + + + ++ T +L +L I Y + Sbjct: 1 MRLIERYIMFEVSRLVAIIVGFLIFIFAIYSAQRYLTDAANGTLALTAVLAIVFYKVIIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L ++ +E+ + G+S + L K V++ AI L I + + Sbjct: 61 LEMLLPVGLYVSVGIALGQLHAESEITALLAAGSSPLRLYKTVMYFAIPLGILVTLLSMF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 P I +L ++Q L S+L F D I + +P+ L + I Sbjct: 121 GRPWAYMQIYRLEQQSQSELDISHLRARKFNVNDHGHMILAATISPDTGHLTDMLIYTPS 180 Query: 180 DTQTHKIYYAQSGSIDLDRQ---AIILNDGEVHRKSPISKDISIMK-FKSYTLQTESANS 235 + T ++ A G I ++ L+ G +R + + F+ +Q + Sbjct: 181 E-NTSSLFRAHCGDITNPSPLTPSVALHSGTSYRLDHHNGQGDNGQIFQRLNIQLKPLMQ 239 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + I + + + +P + +E R+++ + ++ L+++ Sbjct: 240 NPITRRKASSMTALRTSTDPGDT-----------AELQWRISRGINALLMALLAVSV--S 286 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 R RQ + I +SL + + G IP ++L + ++I Sbjct: 287 RVKPRQGRFSTLIPLSLLFTCIFYGGNVCRTLVANGALPVIPGVWLVQILMLFGVGMLIV 346 Query: 356 K 356 + Sbjct: 347 R 347 >gi|261379717|ref|ZP_05984290.1| permease, YjgP/YjgQ family [Neisseria subflava NJ9703] gi|284797387|gb|EFC52734.1| permease, YjgP/YjgQ family [Neisseria subflava NJ9703] Length = 371 Score = 148 bits (375), Expect = 1e-33, Method: Composition-based stats. Identities = 47/365 (12%), Positives = 146/365 (40%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ ++ + + + + ++ + Q + + + +++ +L + G+ + + P Sbjct: 2 IYQRNFIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ +I + + + + Sbjct: 62 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAILIAVMQLWVM 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLD--DDLYIKISKYN-PNNTLQGIFIVDSR 179 P ++ + + S +E F L + + ++ + ++ +F+ + Sbjct: 122 PWAELRSREYAEILKQKQELSLVEAGEFNSLGKRNGRVYFVETFDTESGIMKNLFLREQD 181 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE-SANSS 236 I +A+ G S+ +++ + L DG + +P D + + F+ +L + Sbjct: 182 KNGNDNIVFAKEGNFSLTDNKRTLELRDGYRYSGTPGKADYNRVSFQHLSLIISTTPKLI 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + L+ +NP ++ +E R++ + L+ ++A Sbjct: 242 DPVSHRRTIPTAQLIG--SSNPQHQ--------AELMWRISLTV---SVLLLCLLAVPLS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP--YYIPILYLFLFCISSIFLLMI 354 + + I I++ + G +++ + +E +++ +L + + +L+ Sbjct: 289 YFNPRSGHTYNILIAIGLFLVYQNGLTFLRNAVEDGKIHFWLGLLPMHIIMFVIAVVLLR 348 Query: 355 KKKYT 359 + Sbjct: 349 VRSMP 353 >gi|320195130|gb|EFW69759.1| Permease Ygh-P1, YjgP/YjgQ family [Escherichia coli WV_060327] Length = 356 Score = 148 bits (375), Expect = 1e-33, Method: Composition-based stats. Identities = 71/363 (19%), Positives = 142/363 (39%), Gaps = 18/363 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P +L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYASVGVMLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + +N L I + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIY-TS 179 Query: 180 DTQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 +I+ A+S + ++ ++L++G + +D + +++ L + Sbjct: 180 TANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLEHQGRDDNEQIYRNLQLHL-NPLDQ 238 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + +K ++++ L + +E R ++ L + + + R Sbjct: 239 SPNVKRKAKSVTEL----------ARSVFPADHAELQWRQSRGLT--ALLMALLAISLSR 286 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 RQ + + ++L + G IP L+L + L+++ + Sbjct: 287 VKPRQGRFSTLLPLTLLFVAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMGLLMLVAR 346 Query: 357 KYT 359 ++ Sbjct: 347 DFS 349 >gi|301048205|ref|ZP_07195241.1| conserved hypothetical protein [Escherichia coli MS 185-1] gi|300299963|gb|EFJ56348.1| conserved hypothetical protein [Escherichia coli MS 185-1] Length = 356 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 74/354 (20%), Positives = 128/354 (36%), Gaps = 32/354 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++F + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFFFARYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYASVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + + N L I + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIY-TS 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +I+ A+S + SP + + +Y L + + + + Sbjct: 180 TANRTRIFRARSVDVVD--------------PSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLE----------TYRSEFHKRLTQWLFPVIFGLIS 289 +NL LNP +PN + + +E R ++ L + Sbjct: 226 Y----RNLQLHLNPLDQSPNVKRKAKSVTELARSVFPADHAELQWRQSRGLT--ALLMAL 279 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 + + R RQ + + ++L + G IP L+L Sbjct: 280 LAISLSRVKPRQGRFSTLLPLTLLFVAIFYGGDVCRTLVANGAIPLIPGLWLVP 333 >gi|257126591|ref|YP_003164705.1| permease YjgP/YjgQ family protein [Leptotrichia buccalis C-1013-b] gi|257050530|gb|ACV39714.1| permease YjgP/YjgQ family protein [Leptotrichia buccalis C-1013-b] Length = 365 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 60/366 (16%), Positives = 132/366 (36%), Gaps = 12/366 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI + + FI + +++ + + +S ++ Y +P V Sbjct: 1 MKIIDKYIYNSLILPSVFGISIFTFIMMLNVVMEVMERLFASDLPFISIIDYLFYAMPGV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + V ++ E++ ++ +G +I+P ++L++ E Sbjct: 61 LVQTIPMGAFLGVMLVYGGLSETNEIVAMEGSGVGLFRIIRPAFIFGVILTLIGLGLELY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF-FRLDDDLYIKISKYNPNN-TLQGIFIVDS 178 + P+ I + + + S EE +F + I + + + T + I++ Sbjct: 121 VNPRALKNINAQTKQILASRPSSLTEEKVFLSNEEKGFGFYIDEVSNDKATAKNFLIINK 180 Query: 179 R-DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 R D ++ A+ D + G K+ S+ + + + + T Sbjct: 181 RGDNPYPIVFLAEDAKFDPGIIRLKKVKGYAFDKTGSSQVSAEYQEQEIPISTFFREKKQ 240 Query: 238 IVLKAN-DQNLSFL---LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + K+ + NL L N NP + E + E ++R+ L + + Sbjct: 241 ELKKSRKEMNLKELEKFYKANIKNPEEK-EAALKAQVEIYQRIIGPLAS---TFLCWLGV 296 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYI-IHKIEQNPYYIPILYLFLFCISSIFLL 352 R+ + ISL + FG SY I ++ + +++ F + + + Sbjct: 297 LLSVGHRRSGRGISFGISLIVIFGYIGMASYAKIMVLKNDVPASIAMWVPNFVLFILCIF 356 Query: 353 MIKKKY 358 KKY Sbjct: 357 FSIKKY 362 >gi|167718522|ref|ZP_02401758.1| hypothetical protein BpseD_05837 [Burkholderia pseudomallei DM98] Length = 365 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 57/365 (15%), Positives = 135/365 (36%), Gaps = 22/365 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ I +++ + +S + +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTIMLTSMMIRIVGYAASGEVNPKDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M+ + VLT +++E+++ +G S LIKP+ A + I + + Sbjct: 62 MILVGTLFVSILFVLTRWYKDSEMVVWLASGVSLTRLIKPIGVFATPIVILIAFFAFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNN-TLQGIFIVDSRD 180 P K + A+ Q S L F + I K +P+ +Q +F+ + Sbjct: 122 PWSNQQSKLIKARFQQRDEVSLLAPGQFRESAANHRVFFIEKMSPDQAKVQNVFVTTTEH 181 Query: 181 TQTHKIY--YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + + + ++ + I+L +G + P + IM+F+ Y ++ +S + Sbjct: 182 GKVNVVVSQTGHTETMKNGDRFIVLENGRRYDGVPGQPNFKIMEFERYGVKIQSKQIVSQ 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 L NP N +EF R L + +++I A Sbjct: 242 PTTTGTSTPDLLRNPTNQNL-----------AEFAWRAGLPLIAINLMILAIPLA---YQ 287 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI----LYLFLFCISSIFLLMI 354 +R + + +++ I + + ++E+ + L++ + I ++ + Sbjct: 288 NPRRGRTVNLVMAVLIYLTYSNLLNVVQSQMERGKIAFGLGLIGLHVIVAGIVALLFWLR 347 Query: 355 KKKYT 359 + Sbjct: 348 VRNRP 352 >gi|254225899|ref|ZP_04919501.1| membrane protein, putative [Vibrio cholerae V51] gi|125621525|gb|EAZ49857.1| membrane protein, putative [Vibrio cholerae V51] Length = 334 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 55/347 (15%), Positives = 119/347 (34%), Gaps = 19/347 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + ++ + S +++L I G +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASDGEIPTSMILSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LA++ + + + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RD 180 P + L + + L++ F R D + N L +F+ RD Sbjct: 122 PWSQDKEAHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLYNVFVAQLAPRD 181 Query: 181 TQTHKIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + ++ SG + RQ I L DG + P D I F SY + Sbjct: 182 SILPSVMFSHSGDVKELSDGRQIITLYDGTRYEGVPTRVDYMITNFDSYDGLIGQREVKS 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 LLN ++E R++ V L++++ A Sbjct: 242 AERDWEALPTLSLLN----------NADRRAQAELQWRIS---LVVCIPLLTMLVVPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 + ++ + + ++ I F S ++ I+ L+ Sbjct: 289 VNPRQGRFAKMGPAILIYLTYFLALS-ATKSAIEDGSLPVIIGLWPI 334 >gi|118581150|ref|YP_902400.1| permease YjgP/YjgQ family protein [Pelobacter propionicus DSM 2379] gi|118503860|gb|ABL00343.1| permease YjgP/YjgQ family protein [Pelobacter propionicus DSM 2379] Length = 367 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 58/360 (16%), Positives = 137/360 (38%), Gaps = 22/360 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 E YI+R I ++ C ++ I ++ +N + S ++ + + L Sbjct: 2 IIERYIVREICAPLVVICTVLIMIFSGFSAVRFLNDAVNGLLSGGTVVALVSLKVLIALE 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L+ + + E+ ++ G S+ LI VLFLAILL++ + Sbjct: 62 VLIPVTLYLAIVLALSRLYADGEITAMEAGGLSQKKLISAVLFLAILLALMVTGLSLHAR 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDT 181 P + L + Q + +E F+ L +L K +P N + +++ + Sbjct: 122 PWAYGKMYLLETRGQNEFDIAKVEAGRFYELSHNLVFFAEKLDPARNQARNVWVWEF-GP 180 Query: 182 QTHKIYYAQSGSID----LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + ++ A+S ++AI+ +G + + + ++ F+ LQ E Sbjct: 181 EKRRVTSARSAFQTNGPGEGQKAIVFQEGSHYSLNLKTGTDHLVGFQENVLQLEPPQIPP 240 Query: 238 IVLKANDQNLSFLL-NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + L + +P + +E R + + V+ L++I Sbjct: 241 AKYRRKAASTEHLATSTDPAD-----------IAELQWRFSTGISTVLMALLAI---PLS 286 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIE-QNPYYIPILYLFLFCISSIFLLMIK 355 + +R K + ++ + F ++ +E Q +P ++ + + L ++ Sbjct: 287 RVAPRRGKYGKVVAAIILFFVIYNLSLIAKTWVEKQVVGAVPGIWWVTLLNAGLVLFLLP 346 >gi|332998925|gb|EGK18516.1| hypothetical protein SFVA6_3890 [Shigella flexneri VA-6] Length = 356 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 75/370 (20%), Positives = 137/370 (37%), Gaps = 32/370 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + +N L I + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIY-TS 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +I+ A+S + SP + + +Y L + + + + Sbjct: 180 TANRTRIFRARSVDVVD--------------PSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLE----------TYRSEFHKRLTQWLFPVIFGLIS 289 +NL LNP +PN + + +E R ++ L + Sbjct: 226 Y----RNLQLHLNPLDQSPNVKRKAKSVTELARSAFPADHAELQWRQSRGLT--ALLMAL 279 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 + + R Q + + ++L + G IP L+L + Sbjct: 280 LAISLSRVKPWQGRFSTLLPLTLLFIAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMG 339 Query: 350 FLLMIKKKYT 359 L+++ + ++ Sbjct: 340 LLILVARDFS 349 >gi|225075102|ref|ZP_03718301.1| hypothetical protein NEIFLAOT_00101 [Neisseria flavescens NRL30031/H210] gi|224953586|gb|EEG34795.1| hypothetical protein NEIFLAOT_00101 [Neisseria flavescens NRL30031/H210] Length = 373 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 47/365 (12%), Positives = 148/365 (40%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ ++ + + + + ++ + Q + + + +++ +L + G+ + + P Sbjct: 2 IYQRNFIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ +I + + + + Sbjct: 62 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAILIAVMQLWVM 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLD--DDLYIKISKYN-PNNTLQGIFIVDSR 179 P ++ + + S +E F L + + ++ + ++ +F+ + Sbjct: 122 PWAELRSREYAEILKQKQELSLVEAGEFNSLGKRNGRVYFVETFDTESGIMKNLFLREQD 181 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE-SANSS 236 I +A+ G S++ +++ + L +G + +P D + + F++ +L + Sbjct: 182 KNGNDNIIFAKEGNFSLNDNKRTLDLRNGYRYSGTPGRADYNRVSFQNLSLIISTTPKLI 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V S L+ +NP ++ +E R++ + L+ ++A Sbjct: 242 DPVSHRRTIPTSQLIG--SSNPQHQ--------AELMWRISLTV---SVLLLCLLAVPLS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP--YYIPILYLFLFCISSIFLLMI 354 + + I I++ + G +++ + +E +++ +L + + +L+ Sbjct: 289 YFNPRSGHTYNILIAIGLFLIYQNGLTFLRNAVEDGKIHFWLGLLPMHIIMFVIAVVLLR 348 Query: 355 KKKYT 359 + Sbjct: 349 VRSMP 353 >gi|53718606|ref|YP_107592.1| putative permease [Burkholderia pseudomallei K96243] gi|53725611|ref|YP_102446.1| permease [Burkholderia mallei ATCC 23344] gi|67640815|ref|ZP_00439609.1| permease YjgP/YjgQ family protein [Burkholderia mallei GB8 horse 4] gi|76811087|ref|YP_332585.1| permease [Burkholderia pseudomallei 1710b] gi|121601060|ref|YP_993649.1| hypothetical protein BMASAVP1_A2340 [Burkholderia mallei SAVP1] gi|124383987|ref|YP_001028889.1| hypothetical protein BMA10229_A2945 [Burkholderia mallei NCTC 10229] gi|126450363|ref|YP_001081198.1| hypothetical protein BMA10247_1654 [Burkholderia mallei NCTC 10247] gi|126453581|ref|YP_001065301.1| hypothetical protein BURPS1106A_1021 [Burkholderia pseudomallei 1106a] gi|134281291|ref|ZP_01768000.1| putative membrane protein [Burkholderia pseudomallei 305] gi|167003639|ref|ZP_02269425.1| putative membrane protein [Burkholderia mallei PRL-20] gi|167737554|ref|ZP_02410328.1| hypothetical protein Bpse14_05785 [Burkholderia pseudomallei 14] gi|167814688|ref|ZP_02446368.1| hypothetical protein Bpse9_06062 [Burkholderia pseudomallei 91] gi|167823142|ref|ZP_02454613.1| hypothetical protein Bpseu9_05663 [Burkholderia pseudomallei 9] gi|167844706|ref|ZP_02470214.1| hypothetical protein BpseB_05398 [Burkholderia pseudomallei B7210] gi|167893241|ref|ZP_02480643.1| hypothetical protein Bpse7_05715 [Burkholderia pseudomallei 7894] gi|167901698|ref|ZP_02488903.1| hypothetical protein BpseN_05425 [Burkholderia pseudomallei NCTC 13177] gi|167909937|ref|ZP_02497028.1| hypothetical protein Bpse112_05556 [Burkholderia pseudomallei 112] gi|167917974|ref|ZP_02505065.1| hypothetical protein BpseBC_05423 [Burkholderia pseudomallei BCC215] gi|217419643|ref|ZP_03451149.1| putative membrane protein [Burkholderia pseudomallei 576] gi|226194506|ref|ZP_03790104.1| putative membrane protein [Burkholderia pseudomallei Pakistan 9] gi|242317338|ref|ZP_04816354.1| putative membrane protein [Burkholderia pseudomallei 1106b] gi|254177868|ref|ZP_04884523.1| putative membrane protein [Burkholderia mallei ATCC 10399] gi|254190839|ref|ZP_04897346.1| putative membrane protein [Burkholderia pseudomallei Pasteur 52237] gi|254196871|ref|ZP_04903295.1| putative membrane protein [Burkholderia pseudomallei S13] gi|254199348|ref|ZP_04905714.1| putative membrane protein [Burkholderia mallei FMH] gi|254205664|ref|ZP_04912016.1| putative membrane protein [Burkholderia mallei JHU] gi|254258333|ref|ZP_04949387.1| putative membrane protein [Burkholderia pseudomallei 1710a] gi|254357822|ref|ZP_04974095.1| putative membrane protein [Burkholderia mallei 2002721280] gi|52209020|emb|CAH34960.1| putative permease protein [Burkholderia pseudomallei K96243] gi|52429034|gb|AAU49627.1| permease, putative [Burkholderia mallei ATCC 23344] gi|76580540|gb|ABA50015.1| permease, putative [Burkholderia pseudomallei 1710b] gi|121229870|gb|ABM52388.1| putative membrane protein [Burkholderia mallei SAVP1] gi|124292007|gb|ABN01276.1| putative membrane protein [Burkholderia mallei NCTC 10229] gi|126227223|gb|ABN90763.1| putative membrane protein [Burkholderia pseudomallei 1106a] gi|126243233|gb|ABO06326.1| putative membrane protein [Burkholderia mallei NCTC 10247] gi|134247597|gb|EBA47682.1| putative membrane protein [Burkholderia pseudomallei 305] gi|147748944|gb|EDK56018.1| putative membrane protein [Burkholderia mallei FMH] gi|147753107|gb|EDK60172.1| putative membrane protein [Burkholderia mallei JHU] gi|148026949|gb|EDK84970.1| putative membrane protein [Burkholderia mallei 2002721280] gi|157938514|gb|EDO94184.1| putative membrane protein [Burkholderia pseudomallei Pasteur 52237] gi|160698907|gb|EDP88877.1| putative membrane protein [Burkholderia mallei ATCC 10399] gi|169653614|gb|EDS86307.1| putative membrane protein [Burkholderia pseudomallei S13] gi|217396947|gb|EEC36963.1| putative membrane protein [Burkholderia pseudomallei 576] gi|225933591|gb|EEH29580.1| putative membrane protein [Burkholderia pseudomallei Pakistan 9] gi|238521610|gb|EEP85060.1| permease YjgP/YjgQ family protein [Burkholderia mallei GB8 horse 4] gi|242140577|gb|EES26979.1| putative membrane protein [Burkholderia pseudomallei 1106b] gi|243060865|gb|EES43051.1| putative membrane protein [Burkholderia mallei PRL-20] gi|254217022|gb|EET06406.1| putative membrane protein [Burkholderia pseudomallei 1710a] Length = 365 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 57/365 (15%), Positives = 135/365 (36%), Gaps = 22/365 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ I +++ + +S + +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTIMLTSMMIRIVGYAASGEVNPKDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M+ + VLT +++E+++ +G S LIKP+ A + I + + Sbjct: 62 MILVGTLFVSILFVLTRWYKDSEMVVWLASGVSLTRLIKPIGVFATPIVILIAFFAFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNN-TLQGIFIVDSRD 180 P K + A+ Q S L F + I K +P+ +Q +F+ + Sbjct: 122 PWSNQQSKLIKARFQQRDEVSLLAPGQFRESAANHRVFFIEKMSPDQAKVQNVFVTTTEH 181 Query: 181 TQTHKIY--YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + + + ++ + I+L +G + P + IM+F+ Y ++ +S + Sbjct: 182 GKVNVVVSQTGHTETMKNGDRFIVLENGRRYDGVPGQPNFKIMEFERYGVKIQSKQIVSQ 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 L NP N +EF R L + +++I A Sbjct: 242 PTTTGTSTPDLLRNPTNQNL-----------AEFAWRAGLPLIAINLMILAIPLA---YQ 287 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI----LYLFLFCISSIFLLMI 354 +R + + +++ I + + ++E+ + L++ + I ++ + Sbjct: 288 NPRRGRTVNLVMAVLIYLTYSNLLNVVQSQMERGKIAFGLGLIGLHVIVAGIVALLFWLR 347 Query: 355 KKKYT 359 + Sbjct: 348 VRNRP 352 >gi|325527102|gb|EGD04517.1| YjgP/YjgQ like transporter [Burkholderia sp. TJI49] Length = 363 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 62/365 (16%), Positives = 138/365 (37%), Gaps = 23/365 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ I +++ + +S +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTIMLTTMMIRIVGYAASGEIDPRDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT R++E+++ +G S LIKP+ A + + + + Sbjct: 62 VMLVVTLFVSILFVLTRWYRDSEMVVWLASGVSLTRLIKPIGVFATPIILLIAFFAFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNT-LQGIFIVDSRD 180 P K + A+ Q S L F + I K P+ + +Q +F+ + + Sbjct: 122 PWSNQQSKMIKARFQQRDEISLLAPGQFRESATNHRVFFIEKMTPDQSKVQNVFVTSTEN 181 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + +Q+G + + ++L +G + +P + IM+F+ Y ++ S + Sbjct: 182 GKV-NVVVSQTGHTETRDGDRFVVLENGRRYDGTPGQPNFKIMEFQRYGVKITSTPVVNV 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + L L NP +N +EF R L + ++ I A Sbjct: 241 PTTNSTPTLDLLRNPTRDNL-----------AEFAWRAGLPLIAINLMVLGIPLA--YQN 287 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI----LYLFLFCISSIFLLMI 354 R+ + I+ + +++ I + + +IEQ + L+L + I + Sbjct: 288 PRRSRTIN-LVMAVLIYLTYSNLLNVVQAQIEQGKMSFGVGLLGLHLIVAAIVGFIFWLR 346 Query: 355 KKKYT 359 + Sbjct: 347 VRNRP 351 >gi|148977744|ref|ZP_01814300.1| putative permease [Vibrionales bacterium SWAT-3] gi|145962958|gb|EDK28228.1| putative permease [Vibrionales bacterium SWAT-3] Length = 360 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 55/352 (15%), Positives = 126/352 (35%), Gaps = 25/352 (7%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 ++R +S + + + + + S +++L I +P + ++ P Sbjct: 1 MIRETIKSQFAIFFVLFLVFLSQKFISVLADASDGAIPASLILSIVSLNMPAMGLLMLPL 60 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 + + +E+++++ TG LI+ L+LA++ + + + P + Sbjct: 61 SIYIGILLTFGRLYAESEIVVMNATGIGNKFLIQSALYLALITASVAAFNSFWLSPWSQD 120 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNTLQGIFIVDS--RDTQTH 184 ++Q+ + + L + F D + I + N L+ +F+ RD+ Sbjct: 121 KVEQMYEEVAAENSVDLLPKGKFEGTPDGSSVVFIDDID-GNKLENVFVAQMRPRDSVLP 179 Query: 185 KIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + Y++SG + RQ I++ DG H P D + F+ Y + K Sbjct: 180 SVMYSKSGDVKELSDGRQVIVMYDGTRHEGVPTRLDYMVTHFEEYE---GLIGQREVEKK 236 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 D + + ++E R++ + + L++++ A+ + Sbjct: 237 GRD-------WEAIPTLDLVGNPNNSAKAELQWRISL-VLCI--PLLTMLVVPLSAVNPR 286 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQN-----PYYIPILYLFLFCISS 348 + + I ++ I F S IE+ PI L L Sbjct: 287 QGRFAKIGPAILIYLTYFLAISATKSAIEEGSIPAVVGMWPINALLLIVAIG 338 >gi|115379870|ref|ZP_01466933.1| permease YjgP/YjgQ, putative [Stigmatella aurantiaca DW4/3-1] gi|115363129|gb|EAU62301.1| permease YjgP/YjgQ, putative [Stigmatella aurantiaca DW4/3-1] Length = 342 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 53/338 (15%), Positives = 124/338 (36%), Gaps = 11/338 (3%) Query: 30 IQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLII 89 +Q L ++ S +L + ++ YL P L P F M L ++ + EL + Sbjct: 1 MQFLLGTEVLLGSAVTLTDIGRLILYLTPHFLVKALPIAFLMAILLGLGRLSEDRELTAL 60 Query: 90 DNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENL 149 G S + L+ + + +LL+ + + +P +++K+L + ++ + Sbjct: 61 QALGISPVQLLLGPMAIGLLLAGLMALLAFTAQPWGLTSVKELVNEVIKKNVAGDVKSGV 120 Query: 150 FFRLDDDLYIKISKYN-PNNTLQGIFIVDSRDTQTHKIYYAQSGSID----LDRQAIILN 204 F+ DL + + + + + D R+ + + AQ G + + ++L Sbjct: 121 FYEDLSDLTLYAERVSREGGEWTHVLLHDDREPSSPLLVLAQRGRVSMREGDEALRLVLE 180 Query: 205 DGEVHRKSPISKDISIMKFKSYTLQTE-----SANSSTIVLKANDQNLSFLLNPNPNNPN 259 +GEVHR + + D S+++F+ + + S+ + + + L+ Sbjct: 181 EGEVHRATRSTADYSLLRFEQGEISVGLGGSMNRKSNRFRSQKEEMSPGELIQAAEEAEK 240 Query: 260 YRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVF 319 + H RL + P+ F L+ A R + + + + Sbjct: 241 S-GGNPRPFLMAIHMRLGNAVAPLSFALLGTPLAIGRKQAGRAWGYLLTLSGYVLFYVLS 299 Query: 320 WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 F + ++ + L LF + + + + Sbjct: 300 RVFETLGNQEKLPMVLAAQLPNILFSVLGVVAMWRVSR 337 >gi|309794091|ref|ZP_07688516.1| conserved hypothetical protein [Escherichia coli MS 145-7] gi|308122498|gb|EFO59760.1| conserved hypothetical protein [Escherichia coli MS 145-7] Length = 356 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 75/370 (20%), Positives = 137/370 (37%), Gaps = 32/370 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLLVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + +N L I + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIY-TS 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +I+ A+S + SP + + +Y L + + + + Sbjct: 180 TANRTRIFRARSVDVVD--------------PSPEKPTVMLHNGTAYLLDHQGRDDNEQI 225 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLE----------TYRSEFHKRLTQWLFPVIFGLIS 289 +NL LNP +PN + + +E R ++ L + Sbjct: 226 Y----RNLQLHLNPLDQSPNVKRKAKSVTELARSAFPADHAELQWRQSRGLT--ALLMAL 279 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 + + R RQ + + ++L + G IP L+L + Sbjct: 280 LAISLSRVKPRQGRFSTLLPLTLLFIAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMG 339 Query: 350 FLLMIKKKYT 359 L+++ + ++ Sbjct: 340 LLMLVARDFS 349 >gi|313674336|ref|YP_004052332.1| permease yjgp/yjgq family protein [Marivirga tractuosa DSM 4126] gi|312941034|gb|ADR20224.1| permease YjgP/YjgQ family protein [Marivirga tractuosa DSM 4126] Length = 549 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 43/222 (19%), Positives = 90/222 (40%), Gaps = 6/222 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + ILR FL++ +VFI +L+ + ++ ++ Y + Sbjct: 1 MKKIDKLILRSFIGPFLITFFVVVFILLTQYMLKYFDDFVGKDLGFSVFAELIAYFSINM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 P+ P + + ++ + EL I + G S + +++P+ + LS ++ S N Sbjct: 61 TPIAFPLAVLLSSLMTFGNLGEHFELTAIKSAGISLVRVLRPLFVFVVCLSAVVYYSNNF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKY-NPNNTLQGIFIVDSR 179 I PK L + ++E F+ IK +K + + +L + I + Sbjct: 121 IVPKANLEAYSLLYDIKQKKPSIDIKEGAFYGGIPGYSIKANKKYDDDKSLGDLIIYNHS 180 Query: 180 D-TQTHKIYYAQSGSI--DLDRQAIILN--DGEVHRKSPISK 216 D +I A S + L + +++ DG+ + + +K Sbjct: 181 DRKGNTEIILADSALMYTILGDKYLVMELFDGKSYTEEEANK 222 >gi|30248805|ref|NP_840875.1| hypothetical protein NE0801 [Nitrosomonas europaea ATCC 19718] gi|30180400|emb|CAD84712.1| conserved hypothetical protein [Nitrosomonas europaea ATCC 19718] Length = 358 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 62/362 (17%), Positives = 140/362 (38%), Gaps = 24/362 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI R + F++ + ++ + + + + + T + K+ G Sbjct: 1 MKIIERYITRELLFPFIVVTVILIGLFVSFSVARFLTSAVTETLGTAAMFKLVGLKTIIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P F + L+ MNR+ E+ ++ G +I+ V +A+ ++I I Sbjct: 61 LEVLVPIAFYVAVIYGLSRMNRDQEINVLRTAGYGDNRIIRTVFVIALPIAILSGILSVY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFF-RLDDDLYIKISKYNP-NNTLQGIFIVDS 178 P + + A+A+ L + + F+ I I + ++G+F Sbjct: 121 ARPWAYAESYIMDAQAEAELNTNRFQPGRFYGSEKSGRVIFIRGKDDLEKRMEGVF-HYI 179 Query: 179 RDTQTHKIYYAQSGS----IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 R T+ +I ++ G I L +G+++R S + S ++F+ E+ Sbjct: 180 RTTEDREIIISREGYQQPMTAEQWPHIELREGQIYRLSFDTVKDSAIRFEKMIYFNENDQ 239 Query: 235 SSTIVLK-ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + K A+ ++L P +E RL++ + V+ LI++ Sbjct: 240 AQNYRRKAASTRSLWDSEEPRE-------------IAELQWRLSRPVATVLLALIAVSF- 285 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 ++ K F+ ++ F V++ S + + + ++ I ++M Sbjct: 286 --TRTAPRKDKTDRTFLVAALVFAVYYNLSGLAKTWVEQGVVAAMPGVWWVYGLLIIIVM 343 Query: 354 IK 355 ++ Sbjct: 344 LR 345 >gi|251792100|ref|YP_003006820.1| 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [Aggregatibacter aphrophilus NJ8700] gi|247533487|gb|ACS96733.1| 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase [Aggregatibacter aphrophilus NJ8700] Length = 367 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 52/357 (14%), Positives = 125/357 (35%), Gaps = 19/357 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + +S + ++ I + Q+++ + ++ +++ + G +PT+ Sbjct: 2 ILTRYLTKEVFKSQIAILFILLLIFFCQQLVRVLGSAANGQVPADLVFSLLGLGMPTMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P C + L + +E+ ++ G + L+K VL L++ + + + Sbjct: 62 LMLPLCLFIAILLTLGRLYAESEITVMRACGIGQRILVKIVLILSLFTAAVAAYNALWLT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIKISKYNPNNTLQGIFIVDSRDT 181 P ++ +A+ L F ++ D + I +N + +++ ++ Sbjct: 122 PWAIHKQTEIVEEAKANPNMGALSAGQFMTANNSDFVLFIDNI-QDNQINNVYVFQTQPK 180 Query: 182 Q--THKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + A+ G + Q + L + + + I D I F Y + Sbjct: 181 GQSKPSVIVAEKGELKALPNGDQILNLQNSDRFEGTAILPDFRITHFDEYQAYLGHKTVA 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 +A + ++ L N N ++EFH RLT L I L+++ R Sbjct: 241 DDADEAGEMDIMQLWNANAP----------AMKTEFHWRLTLILAVPIMALLAVP--LSR 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 RQ + + L S + L ++ + + Sbjct: 289 VNPRQGRFAKVLPALLLYLIYFLLQSSLKSAGGAGKLDASLFMPLVNIAFFALAIFL 345 >gi|330720484|gb|EGG98783.1| putative permease [gamma proteobacterium IMCC2047] Length = 343 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 49/343 (14%), Positives = 128/343 (37%), Gaps = 24/343 (6%) Query: 26 IAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTE 85 + ++++ I+ V+S + + L + + +P +L MV P + V M E Sbjct: 1 MVLTSRLVRYISEVASGDIAADFLFYLIVFRLPDILLMVLPISLLLAILLVFGRMYIENE 60 Query: 86 LLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYL 145 + + +G S L + L+S+ + + P + +L + F + Sbjct: 61 MAVFSASGVSLKKLAVYAMASVSLVSLTVAALSFSLAPWGLKKVDELFVENANRTVFETV 120 Query: 146 EENLFFR-LDDDLYIKISKYNPNNT-LQGIFIVDSRDTQTHKI-YYAQSGSIDLDRQA-- 200 F +D++ + + + + + +FI + + A+ G +++ + Sbjct: 121 RAGRFSPMGEDNMSLYAERLSDDQRVMSDVFIAREANGKKSNFQIMAEQGYLEVKPNSLA 180 Query: 201 --IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNP 258 +IL +G + P S+D + +F+++ ++ S LL + + Sbjct: 181 KYLILKNGYRYEGDPGSRDYKVTQFETFGIKLSSPPEQVKENSTRGMATGELLKLDSSTA 240 Query: 259 NYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGV 318 +E R++ L +I+++ + ++ + + + ++ F Sbjct: 241 ----------IAELQWRISLPLL---VPIIALLGVPLSRVNPRQGRFYFLIPAMLFYFAY 287 Query: 319 FWGFSYIIHKIEQNP-YYIPILY---LFLFCISSIFLLMIKKK 357 S + +E+N L+ + C++ + L + KK Sbjct: 288 LVLLSGMKTAVEENTISPWLGLWWVHVMFLCLALLVFLNLHKK 330 >gi|26987718|ref|NP_743143.1| permease YjgP/YjgQ family protein [Pseudomonas putida KT2440] gi|24982406|gb|AAN66607.1|AE016288_6 conserved hypothetical protein [Pseudomonas putida KT2440] gi|313497348|gb|ADR58714.1| Permease YjgP/YjgQ family protein [Pseudomonas putida BIRD-1] Length = 371 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 50/318 (15%), Positives = 116/318 (36%), Gaps = 23/318 (7%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ R + + ++ I + ++ + + +L I G+ +P L ++ Sbjct: 5 RYLSREVLVTLSAVSAVLLVIIMSGRFIKYLAQAAQGVLDPGVLFLIMGFRLPGFLQLIL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + + +E+ ++ TG S+ L+ + A L+++ + + P Sbjct: 65 PLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLLGMTMAPAALVALLVAWLSLSLAPLG 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNT-LQGIFIVDSR---- 179 + ++Q+ ++ F L F L D + + + L G+FI + R Sbjct: 125 VAQVQQIISQQDALTEFDTLVPGRFQTLRDGSRVTYTEQLSDDRINLGGVFISEKRFNQD 184 Query: 180 --DTQTHKIYYAQSGS--IDLDRQ-AIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + + A+ G I D ++L +G + +P D +K+ +Y + Sbjct: 185 KTKDRAPSVLVAEKGHQEIQADGNRYLVLENGYRYDGNPGQADYRAIKYDTYGVLLPKPE 244 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + V + S L+ + R+E RL+ + + L+++ Sbjct: 245 VAEEVTEREALPTSELI----------GKEGLRERAELQWRLSLPILVFVVTLLAVP--L 292 Query: 295 KRALVRQRKKIHPIFISL 312 R RQ + + + L Sbjct: 293 SRVNPRQGRFLKLLPAIL 310 >gi|114331100|ref|YP_747322.1| permease YjgP/YjgQ family protein [Nitrosomonas eutropha C91] gi|114308114|gb|ABI59357.1| permease YjgP/YjgQ family protein [Nitrosomonas eutropha C91] Length = 357 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 55/334 (16%), Positives = 123/334 (36%), Gaps = 22/334 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E YI R + F + + ++ + + + + + T + K+ G Sbjct: 1 MGIIERYISRELLLPFFVVTIILIGLFVSFSVARFLTGAVAETLGAIAMFKLVGLKTIIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P F + + L+ MNR+ E+ ++ + G +I+ V +A+ +++ + Sbjct: 61 LEVLVPIAFYVAVIHGLSRMNRDQEINVLRSVGYGDNQIIRTVFIIALPIAVLSGVLSIY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFF-RLDDDLYIKISKYNP-NNTLQGIFIVDS 178 P + ++A+A+ L + F+ I I + ++GIF Sbjct: 121 ARPWAYAESYVMNAQAEAELNTDRFQPGRFYGSEKSGRVIFIRGKDDLEKRMEGIF-HYI 179 Query: 179 RDTQTHKIYYAQSGS----IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 R + +I ++ G I L DG+++R + S ++F+ + N Sbjct: 180 RTAENREIIVSREGYQQPMTQEQWPYIELLDGKIYRLGYDAARDSTVQFEKMIY--FNEN 237 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + + L N +E RL++ ++ LI++ Sbjct: 238 DQAQNYRRKAASTQSLWNSEQPQE----------IAELQWRLSRPAATILLALIAVSF-- 285 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHK 328 ++ K FI ++ F V++ S + Sbjct: 286 -TRTAPRKDKADRTFIVAALVFAVYYNLSGLAKT 318 >gi|327484988|gb|AEA79395.1| Predicted permease [Vibrio cholerae LMA3894-4] Length = 366 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 119/347 (34%), Gaps = 19/347 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + ++ + S +++L I G +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASDGEIPTSMILSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LA++ + + + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RD 180 P + L + + L++ F R D + N L +F+ RD Sbjct: 122 PWSQDKEAHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLYNVFVAQLAPRD 181 Query: 181 TQTHKIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + ++ SG + RQ I L +G + P D I F SY + Sbjct: 182 SILPSVMFSHSGDVKELSDGRQIITLYEGTRYEGVPTRVDYMITNFDSYDGLIGQREVKS 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 LLN ++E R++ V L++++ A Sbjct: 242 AERDWEALPTLSLLN----------NADRRAQAELQWRIS---LVVCIPLLTMLVVPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 + ++ + + ++ I F S ++ I+ L+ Sbjct: 289 VNPRQGRFAKMGPAILIYLTYFLALS-ATKSAIEDGSLPVIIGLWPI 334 >gi|206602447|gb|EDZ38928.1| Putative permease, YjgP/YjgQ family [Leptospirillum sp. Group II '5-way CG'] Length = 378 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 51/337 (15%), Positives = 116/337 (34%), Gaps = 21/337 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+ + F++ L +V + Q L +NL+ + S+ +L++ + P Sbjct: 1 MKIIHRYLFLELLPPFVIGLLVLVVLILTQQTLMIMNLLVNKGLSIPTVLRLVMMIFPQF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P +T + + E+ + +G L+ P++ A L + F Sbjct: 61 LTMIIPVSVLAASTATFNRLASDGEITALKASGIGLSRLLWPLVLFAFLGYVGSFYMSLK 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 E +++++ + + +F D I + + + +QG+FI Sbjct: 121 AEETQGMSLQEMISTVLKKKMSLGIRPQVFNNFMDRFVIYVDRMPTFSRMQGVFIYQEGK 180 Query: 181 TQTHKI-YYAQSGSIDLDRQA-----IILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 ++ A+ GS+ + I L G + + ++F SY L + Sbjct: 181 GKSPSTVIMAREGSLLNEENGRPGIRIQLRSGTLLQGGAAQ---QFVRFSSYDLTIFGKS 237 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + Q L + + E R + +P + + + Sbjct: 238 AGATEKSPTIQEL-------EKKIGRSSKPDVSLLRELEDRYKNYTYPFSCLIFAFLGIP 290 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ 331 ++ K+ + + F YI++ ++ Sbjct: 291 FGIYAKRSGKLAGFVFATASVI-----FFYILNTVDD 322 >gi|319896844|ref|YP_004135039.1| inner membrane protein [Haemophilus influenzae F3031] gi|317432348|emb|CBY80703.1| conserved inner membrane protein [Haemophilus influenzae F3031] Length = 364 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 41/314 (13%), Positives = 113/314 (35%), Gaps = 18/314 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + +S + L ++ I + Q ++ + ++ +++ + G +PT+ Sbjct: 2 ILIRYLIKEVFKSQIAILLILLLIFFSQQFVRVLGAAANGNVPADLVFSLLGLGMPTMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P C + + +E+ ++ G + L+K L +++L + + + Sbjct: 62 LMLPLCLFIAILLTFGRLYAESEITVMRACGVGQRILVKVALLMSLLTASIATYNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + A+ T L F ++ + +N + +++ + Sbjct: 122 PWAIQKQANIVEDAKANPTMGVLSSGQFISTSNNNVVLFIDQIKDNQIHNVYLFQITPKK 181 Query: 183 --THKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G + Q + L + + + + D I F Y + Sbjct: 182 QIKPSVVTAEKGELIALPNGDQVLNLKNTQRVEGTSVLPDFRITHFDEYQAYLGHQETEN 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +A + L L+ + ++E H R+T L L++++A Sbjct: 242 NADEAAELTLVQLIQQDSP----------AAKAELHWRITLIL---AVPLMALIAVPLSR 288 Query: 298 LVRQRKKIHPIFIS 311 + ++ + I + Sbjct: 289 VNPRQGRFAKILPA 302 >gi|325279047|ref|YP_004251589.1| permease YjgP/YjgQ family protein [Odoribacter splanchnicus DSM 20712] gi|324310856|gb|ADY31409.1| permease YjgP/YjgQ family protein [Odoribacter splanchnicus DSM 20712] Length = 487 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 46/240 (19%), Positives = 99/240 (41%), Gaps = 8/240 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK +++L+ F+ + +F+ + + + I+ + ++ ++ Y+ T+ Sbjct: 1 MKKLHIFMLKSFIGPFVATFFISMFVLIMQFLWRMIDEIVGKGLEFTVIAELLIYVATTL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +PM P + + S+ N EL+ + + G S ++KP++ L I L++F F+ N Sbjct: 61 VPMALPLAVLLSSIMTFGSLGENYELIALKSAGISLYRIMKPLIILIICLTVFAFVFSNN 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 I P L + +E +F + IKI K N + + I + + Sbjct: 121 ILPVANLKFYSLLYDIRKQKPEMSFKEGIFTNDLEGYSIKIDKINKETGMMYNMLIYEHK 180 Query: 180 DT-QTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDIS--IMKFKSYTLQTES 232 D + + A SG + D ++ ++L +G + + S F+ E+ Sbjct: 181 DGSGNYDVTKADSGMMISDAKSNLMELVLYNGHSYTDEGMKNPSSRKTFPFRRLKFDKET 240 Score = 42.3 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 26/157 (16%), Positives = 60/157 (38%), Gaps = 11/157 (7%) Query: 210 RKSPISKDISIMKFKSYT--LQTESANSSTIVLKANDQNLSFLLNPNPNNPNY---RPEL 264 ++ I D S KF + Q + N ++ +Y + E Sbjct: 306 QRDSILADQSRGKFSDPDSLFTAFDIEEQRRAVDNALQYAREVKQRNQDDLHYYVAQQEN 365 Query: 265 LETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSY 324 + + E+H++ T IF I A A++R+ P+ +S+ + F +++ S Sbjct: 366 VIKSQLEWHRKFTLSFACFIFFFIG---APLGAIIRKGGLGMPVVVSV-LLFIIYYIISM 421 Query: 325 IIHKIEQNPYYIPI--LYLFLFCISSIFLLMIKKKYT 359 + + + P +++ F + + +++ K T Sbjct: 422 MGERSAREAVISPAAGMWISAFILLPLGIILTYKSVT 458 >gi|113474402|ref|YP_720463.1| permease YjgP/YjgQ [Trichodesmium erythraeum IMS101] gi|110165450|gb|ABG49990.1| permease YjgP/YjgQ [Trichodesmium erythraeum IMS101] Length = 392 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 66/377 (17%), Positives = 143/377 (37%), Gaps = 27/377 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPT 59 + + YI+ + FL + V + + + V+ S ++I +++ +P Sbjct: 19 ISVMDRYIIAELIGPFLFGVGLFSSLGITVGAMFELVRKVTESGLPISIAIQVFLLKMPE 78 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + + P + T V + M+ ++E++ + + G S +I P + L++ ++ F Sbjct: 79 FIGLAFPMAMILTTLMVYSQMSGHSEIVALRSCGISIYRMIIPTIILSLTVTTLSFALNE 138 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-------------YIKISKYNP 166 II P + K + EEN+F+ + K++ Sbjct: 139 IIVPSANYQASLILEKTLEQENPPFKEENIFYPEFGKVKQPDGSQDDTLTRLFYAEKFD- 197 Query: 167 NNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSY 226 +QG+ I+D +I ++S + + L +G ++ SP +I+KF Sbjct: 198 GKYMQGVTILDRSQYGVDQIVSSESATWNSAENIWDLFNGTIYLVSPDGSYRNIVKFDHK 257 Query: 227 TLQTESANSSTIVLKA--NDQNLS---FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLF 281 L+ +A + N+S L + NYR + R + ++L Sbjct: 258 KLKLSTAPLDLAGKRRTYKQMNISQSYEYLELMRLSGNYRKVVKTQVRIQ--QKLALPFV 315 Query: 282 PVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL-- 339 ++ GL+ + R+ + IS+ I F + S+I + Q P L Sbjct: 316 CLVMGLVGAALGIRPQ--RKANRGTSFGISVIIIFAYYL-LSFITGAMGQKEILTPFLAG 372 Query: 340 YLFLFCISSIFLLMIKK 356 +L F + + ++ + Sbjct: 373 WLPNFLGLGVAVFLLAR 389 >gi|209964085|ref|YP_002297000.1| predicted permease YjgP [Rhodospirillum centenum SW] gi|209957551|gb|ACI98187.1| predicted permease YjgP [Rhodospirillum centenum SW] Length = 414 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 62/371 (16%), Positives = 145/371 (39%), Gaps = 21/371 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + YIL + +S + ++ + +IL+ +L+++ ++L+++ L+P L Sbjct: 21 RLIDRYILTETAKPLALSLVVVMLALLLERILRLFDLLANHGGPFQLVLRMAANLVPHYL 80 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P F + V+ EL + ++G S + +P L+L L +F + I Sbjct: 81 GLALPAAFFISMFVVVARFGDENELDALQSSGLSVPRITRPFLWLGTGLMVFSVLLFGFI 140 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSRD 180 +P R + + A + + ++ F + I +P L+ +F+ RD Sbjct: 141 QPYSRYAYQAIHYAVVNAAWDATVPQSAFVDAGQGVTITADMVDPTGRNLERVFVQQLRD 200 Query: 181 TQTHKIYYAQSGSI----DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ----TES 232 + A+SG + D R + L++G V ++ + +++F TL E+ Sbjct: 201 GEEWVT-TAESGRLGVSDDRKRILLTLDNG-VQVRTRPDATVEVVRFGRLTLDREFTLEA 258 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + L L + P T +EFH RL + + + L+++ Sbjct: 259 PPFRPRGGSERELTLVEL-WQEMHQPITLV-PRGTLEAEFHARLVRAVSLPLMPLLALPM 316 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI---LYLFLFCISSI 349 R+ + I+L+ + V + S + + + +P +++ + + Sbjct: 317 GMAAKRARRG-----LGIALAAAILVLYHHSIQMGESLADIGRVPAALGIWVPFVVFALL 371 Query: 350 FLLMIKKKYTK 360 + + + Sbjct: 372 CGWLFYRTQDR 382 >gi|237807325|ref|YP_002891765.1| permease YjgP/YjgQ family protein [Tolumonas auensis DSM 9187] gi|237499586|gb|ACQ92179.1| permease YjgP/YjgQ family protein [Tolumonas auensis DSM 9187] Length = 367 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 72/363 (19%), Positives = 137/363 (37%), Gaps = 20/363 (5%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 YI + ++ L L ++ I Q ++ + + + +++ ++ IP + ++ Sbjct: 5 RYIFKETLKTQLSILLILLLIFTSQQFIRILARAADGSIPSSLIGQMMLLNIPYMGLLLL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + + ++E+ ++ G +++ L LA+L ++ ++ + P Sbjct: 65 PISLFIAILFAHGRLYADSEMTVLRAIGVGPSYIMRISLVLALLTTVVATVNTMWLAPMA 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNT-LQGIFIVDSR-DTQ 182 R QL A+ LE F LD L + + LQ IF++ D Sbjct: 125 REKQSQLLDAAKADPLSIPLESGRFLSLDGGHLTAYVEDVQDSGRSLQRIFLLQRSPDPA 184 Query: 183 THKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 I A SG + D Q + L +G+ + +P S SI F Y Q + + Sbjct: 185 EAAIIVAASGHLTNDAQGTPWVTLANGKRYAGTPPSTQFSIANFAEYKAQLQRKDIEPST 244 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI-VAADKRAL 298 KA S L N +E+ R+ L + LI++ +A Sbjct: 245 PKARALPSSALYNSTDK----------KQIAEWQWRVVLPLSIPLMTLIAVPLAVVNPRQ 294 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 R K + + + LS + G S I Q P P LY+ + +F + + K Sbjct: 295 GRYAKLLPAVMLYLSYFLLLSAGQSAIER--GQLPEM-PGLYIIPVLFTLLFAVPMNIKS 351 Query: 359 TKI 361 T++ Sbjct: 352 TRL 354 >gi|315634608|ref|ZP_07889892.1| inner membrane protein YjgP [Aggregatibacter segnis ATCC 33393] gi|315476556|gb|EFU67304.1| inner membrane protein YjgP [Aggregatibacter segnis ATCC 33393] Length = 364 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 50/307 (16%), Positives = 113/307 (36%), Gaps = 19/307 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + +S + ++ I + Q+++ + ++ +++ + G +PT+ Sbjct: 2 ILTRYLTKEVFKSQIAILFILLLIFFCQQLVRVLGSAANGQVPADLVFSLLGLGMPTMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P C + L + +E+ ++ G L+K VL L++ + + Sbjct: 62 LMLPLCLFIAILLTLGRLYAESEITVMRACGVGSKILVKVVLILSLFTGALAAYNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + +A+ L F ++ D + I N + +++ ++ Sbjct: 122 PWAINKQVAIIEEAKANPNMGALSAGQFMTANNSDFVLFIDDI-QENQINNVYVFQTQPK 180 Query: 182 Q--THKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + A+ G + Q + L + + + I D I F Y Sbjct: 181 GQTKPSVIVAEQGELKSLPNGDQILRLQNSDRFEGTAILPDFRITHFDEYQAYLGHKAVE 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 +A + +L LLN + ++EFH RLT L I L+++ R Sbjct: 241 DDSNEAGEMSLMQLLNAD----------TPAMKTEFHWRLTLILAVPIMALLAVP--LSR 288 Query: 297 ALVRQRK 303 RQ + Sbjct: 289 VNPRQGR 295 >gi|296283030|ref|ZP_06861028.1| permease [Citromicrobium bathyomarinum JL354] Length = 407 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 49/364 (13%), Positives = 128/364 (35%), Gaps = 19/364 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI R + + + Q+L+ VS+ + ++ ++ G L+P Sbjct: 5 SRLDRYIFRLTIVPMIGVFALAATLLMLEQMLKLFRFVSTEGGPVGVVFQMLGTLLPDYA 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + T + ++EL ++ G L++ + + L + Sbjct: 65 VLAIPLGLLLGTLFAFRQLALSSELDVMRAVGLGYGRLLRVPFAITLALMAVNAAIVFYV 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSRD 180 +P + ++L + + ++ F L D + ++I + + L+GIF + + Sbjct: 125 QPVSKYYYEELQFDLRSGALGASIKVGEFTTLADRMALRIEESEDSGRKLKGIFARINAE 184 Query: 181 TQTHKIYYAQSGSI-----DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 A+ G + D + L+DG + + P + ++ F + L + Sbjct: 185 DGQTLSISAREGRFLSTSDNPDTIILRLSDGTIVQ-DPPGETPRVLSFTEHDLPIDLPAI 243 Query: 236 STIVLK---ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + + L LL ++ + L + ++ F+ R+ + + L+++ Sbjct: 244 EQFRARGEAEREYILPELLRMGWSDTTTEAQRLGS-QASFNYRMVELAMMLFMPLLAVAL 302 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI---EQNPYYIPILYLFLFCISSI 349 A ++ +F+++ + Y+ +P L+ + + Sbjct: 303 AIPP---KRSTSALGVFVAVILVVAYHKVNQYMQDFAALGRVDPTLG--LWGPFAIFAGL 357 Query: 350 FLLM 353 L Sbjct: 358 ILWW 361 >gi|325132745|gb|EGC55428.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M6190] Length = 396 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 45/365 (12%), Positives = 144/365 (39%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ +++ + + + + ++ + Q + + + +++ +L + G+ + + P Sbjct: 27 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTP 86 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ ++ + + + + Sbjct: 87 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWVI 146 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLD--DDLYIKISKYN-PNNTLQGIFIVDSR 179 P ++ + + S +E F L + + ++ + ++ +F+ + Sbjct: 147 PWAELRSREYAEILKQKQELSLVEAGEFNSLGKRNGRVYFVETFDTESGIMKNLFLREQD 206 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE-SANSS 236 I +A+ G S++ +++ + L G + +P D + + F+ L + Sbjct: 207 KNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTTPKLI 266 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + L+ +NP ++ +E R++ + L+ ++A Sbjct: 267 DPVSHRRTIPTAQLIG--SSNPQHQ--------AELMWRISLTV---SVLLLCLLAVPLS 313 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP--YYIPILYLFLFCISSIFLLMI 354 + + I I++ + G + + +E +++ +L + + +L+ Sbjct: 314 YFNPRSGHTYNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFVIAIVLLR 373 Query: 355 KKKYT 359 + Sbjct: 374 VRSMP 378 >gi|300718281|ref|YP_003743084.1| permease [Erwinia billingiae Eb661] gi|299064117|emb|CAX61237.1| Putative permease [Erwinia billingiae Eb661] Length = 356 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 66/363 (18%), Positives = 140/363 (38%), Gaps = 18/363 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E YI I R ++ F+V + + + ++ T +L ++ + Y + Sbjct: 1 MSLIERYITVEIRRLVMVIVGFLVVMFASYSAQRYLTDAANGTLALQVVFDVVCYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + T L + ++E+ I G S + L K VLFLAI L++ + + Sbjct: 61 LEMLLPVGLYVATAVALGQLYTDSEITAIFAAGASPVRLYKAVLFLAIPLAVVVTLLSLY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSR 179 P I +L ++Q L S+L+ N F + S+ +P ++ L I SR Sbjct: 121 GRPWAYGNIYRLEQQSQSVLDVSHLQANKFNVNGSGRMVMASRIDPASHQLTDALIY-SR 179 Query: 180 DTQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + +Y A S + ++ L +G + ++ + S + + S Sbjct: 180 SGKNTNLYRAHSVVVTDPSPATPSVNLRNGTAYVLDREGAQDNMQHYHSLNIALKPFIES 239 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + + + +P + ++E R ++ L ++ L++I R Sbjct: 240 QEVRRKSAPVADLWCSSDPAD-----------KAELQWRESRGLSTLLMVLLAIP--LSR 286 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 RQ + + ++L + + G + IP ++L + + + + Sbjct: 287 TKPRQGRYATLLPLTLLFTAIFYGGNVCRTLVANGSLPAIPGVWLVPLVMLTGLAFCLAR 346 Query: 357 KYT 359 ++ Sbjct: 347 DFS 349 >gi|229527563|ref|ZP_04416955.1| hypothetical protein VCG_000632 [Vibrio cholerae 12129(1)] gi|229335195|gb|EEO00680.1| hypothetical protein VCG_000632 [Vibrio cholerae 12129(1)] Length = 349 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 119/347 (34%), Gaps = 19/347 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + ++ + S +++L I G +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASDGEIPTSMILSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LA++ + + + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RD 180 P + L + + L++ F R D + N L +F+ RD Sbjct: 122 PWSQDKEAHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLYNVFVAQLAPRD 181 Query: 181 TQTHKIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + ++ SG + RQ I L +G + P D I F SY + Sbjct: 182 SILPSVMFSHSGDVKELSDGRQIITLYEGTRYEGVPTRVDYMITNFDSYDGLIGQREVKS 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 LLN ++E R++ V L++++ A Sbjct: 242 AERDWEALPTLSLLN----------NADRRAQAELQWRIS---LVVCIPLLTMLVVPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 + ++ + + ++ I F S ++ I+ L+ Sbjct: 289 VNPRQGRFAKMGPAILIYLTYFLALS-ATKSAIEDGSLPVIIGLWPI 334 >gi|237736826|ref|ZP_04567307.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817] gi|229420688|gb|EEO35735.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817] Length = 358 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 62/363 (17%), Positives = 132/363 (36%), Gaps = 15/363 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL I + FI + I+ + + S+ +++I + +P + Sbjct: 1 MKLIDKYILNEIKIPVIFGVSLFTFIFLIDIIVAMMENIIVKGISIIDVMRILSFYLPPI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + + R +E + G S ++KP+ A +++F+F + Sbjct: 61 LSQTIPMGMFLGIMLTFSKFTRTSEATAMSAVGMSLRDIVKPIFVAACCVTLFIFFLQES 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVD-S 178 I P+ + ++ L+AK L+E F D+ + I + +GI I + Sbjct: 121 IIPRSVAKLQFLTAKIAYENPVFQLKEKTFIDEVDEYNLYIDRMEGKEKKAKGILIFQKA 180 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK--SYTLQTESANSS 236 D + + A++L + + + + K++ +F L + Sbjct: 181 EDKPFPTVIVGEEAYWK--DSAMVLINSKFYNFNDKGKEVLRGEFDEKRIPLAAYFSEIE 238 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + LL + P Y+ E +K+L + ++S++ Sbjct: 239 VKVKDIEAMGIGTLL---KEMKDKTPAEKIPYKVEINKKLAVPFSTM---MLSLLGVFLS 292 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN--PYYIPILYLFLFCISSIFLLMI 354 + K +SL + F + + + P +I + ++ + + L M Sbjct: 293 IGHHRSGKGANFALSLIVIFSYITCLNVGMVMATKGIIPAFIGV-WIPNVILFLLTLFMY 351 Query: 355 KKK 357 KKK Sbjct: 352 KKK 354 >gi|148556806|ref|YP_001264388.1| permease YjgP/YjgQ family protein [Sphingomonas wittichii RW1] gi|148501996|gb|ABQ70250.1| permease YjgP/YjgQ family protein [Sphingomonas wittichii RW1] Length = 400 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 54/365 (14%), Positives = 128/365 (35%), Gaps = 17/365 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y+ R I L + + + + ++L+ + V S ++++ ++ LIP + Sbjct: 5 TLTDRYVARLIATPLLATLVIAAMLLTLDKMLRLFDFVVSEGGPVSVVWRMLANLIPEYM 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + + ++EL + G S L++ + A+ L++ I Sbjct: 65 SLGIPIGLMLGCLLAFRKLALSSELDVFRAVGMSYGRLLRVPYYYAVALALLNLAIVGFI 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS-KYNPNNTLQGIFIVDSRD 180 +P R + L + + + ++ F +L + I++ L GIF++ Sbjct: 125 QPYSRYAYEGLRFELRSGALGASIKVGEFTKLGKRMTIRVESSREGGRELSGIFVMTESK 184 Query: 181 TQTHKIYYAQSGSI----DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 A+ G D D + L G + +P K+ +++F + L + Sbjct: 185 DGKSLAVTAEHGQFLATDDPDTIILRLQKGVLVHDAPQFKEPRVLQFVGHDLPIDLPKME 244 Query: 237 TIVLKAN---DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + + + L+ + + +RSEFH RL + + + + Sbjct: 245 AFRQRGGRDLEMTMPELVV-TAHQATTPAKQRAQFRSEFHFRLVE-----VATMFLLPML 298 Query: 294 DKRALVRQRKKIHPIFISLSISFGV---FWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 V ++ + + LSI V + L++ +++ Sbjct: 299 ALALAVPPKRSSSALGVFLSIVMIVTQHKINEYAASVAALGRIDPLIALWVPFLAFAALV 358 Query: 351 LLMIK 355 M + Sbjct: 359 WWMYR 363 >gi|37681090|ref|NP_935699.1| permease [Vibrio vulnificus YJ016] gi|37199840|dbj|BAC95670.1| predicted permease [Vibrio vulnificus YJ016] Length = 366 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 53/357 (14%), Positives = 126/357 (35%), Gaps = 25/357 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + Q + + S ++++ I +P++ Sbjct: 2 IIVRYLIRETLKSQFAIFFVLFLVFLSQQFISVLADASDGDIPASLIMSIVALNMPSMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+++++ TG LI+ L+LA++ S + + Sbjct: 62 LMLPLSLYIGILITFGRLYAESEIVVMNATGIGNKFLIQAALYLAVITSGVAAFNSLWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RD 180 P ++QL+ + + L++ F D + + L +F+ RD Sbjct: 122 PWSMDRVEQLTEQVAAENSVDLLKKGQFQFTPDRSSVVFIDDIKDKQLSNVFVAQLMPRD 181 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + +A G + RQ I + G + P + I +F+ Y + Sbjct: 182 SILPSVMFANGGEVKELSDGRQIISMKQGTRYEGVPTRVEYMITEFEQYDGLIGQRSVKQ 241 Query: 238 IVLKANDQNLSFLL-NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L+ NP+P ++E R++ + L++++ Sbjct: 242 RGRDWDAIPTLELIGNPDPE-----------AQAELQWRVSL-FVCI--PLLTMLVIPLS 287 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-----NPYYIPILYLFLFCISS 348 A+ ++ + + ++ I F S +E+ + PI L L Sbjct: 288 AVNPRQGRFAKMGPAILIYLAYFLSISATKSALEEGDISASIGMWPINGLLLLVAIM 344 >gi|86133416|ref|ZP_01051998.1| predicted permease YjgP/YjgQ family [Polaribacter sp. MED152] gi|85820279|gb|EAQ41426.1| predicted permease YjgP/YjgQ family [Polaribacter sp. MED152] Length = 483 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 52/251 (20%), Positives = 95/251 (37%), Gaps = 16/251 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL+ F+ + L ++F+ + + Q ++ S+ +LK Y + Sbjct: 1 MKILDKYILKSFLVPFIATFLIVLFVLVMQALWQAFENIAGKGISVIFILKFLYYTTLMI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P P + + L ++ N E + G S L++P+ LAI LS F+ N Sbjct: 61 IPQALPIGVLLSSIMALGNLGENYEFAAAKSAGVSLQRLVRPIGILAIALSGLNFLFLNN 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKY--NPNNTLQGIFIVD- 177 + P + L + L F IK + N L+ ++I D Sbjct: 121 VFPYANLKQRNLYLNIKKKKPALALVPGSFNADIPGYQIKFDEKYGEEENLLKKVWIYDL 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQ----AIILNDGEVHRKSPISKDISI---------MKFK 224 + + K+ A+SG I + IL +G + + S +I FK Sbjct: 181 TSNRGNQKVITAESGKIVTEEGSRYMTFILYNGNYYEEHVKSARTTIKRKKMAASSATFK 240 Query: 225 SYTLQTESANS 235 Y + ++ Sbjct: 241 EYEFNIDIGDT 251 >gi|115352567|ref|YP_774406.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria AMMD] gi|115282555|gb|ABI88072.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria AMMD] Length = 363 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 61/365 (16%), Positives = 139/365 (38%), Gaps = 23/365 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ I +++ + +S +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTIMLTTMMIRIVGYAASGEIDPRDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT R++E+++ +G S LIKP+ A L + + + Sbjct: 62 VMLVVTLFVSILFVLTRWYRDSEMVVWLASGVSLTRLIKPIGVFATPLILLIAFFAFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNT-LQGIFIVDSRD 180 P K + A+ Q S L F + I K +P+ + +Q +F+ + + Sbjct: 122 PWSNQQSKMIKARFQQRDEISLLAPGQFRESASNHRVFFIEKMSPDQSKVQNVFVTSTEN 181 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + I + +G + + ++L DG + +P + IM+F+ Y ++ S + + Sbjct: 182 GKV-NIVVSHTGHTETKDGDRFVVLEDGRRYDGTPGQPNFKIMEFQRYGVKITSTPVTNV 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + L NP +N +EF R L + ++ I Sbjct: 241 PTTNSTPTPDLLRNPTRDNL-----------AEFAWRAGLPLIAINLMVLGIP--LSYQN 287 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN----PYYIPILYLFLFCISSIFLLMI 354 R+ + I+ + +++ I + + +IEQ + L++ + I ++ + Sbjct: 288 PRRSRTIN-LVMAVLIYLTYSNLLNVVQAQIEQGKMSFGVGLVGLHVVVAAIVALIFWLR 346 Query: 355 KKKYT 359 + Sbjct: 347 VRNRP 351 >gi|330811514|ref|YP_004355976.1| permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379622|gb|AEA70972.1| Putative permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 373 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 62/357 (17%), Positives = 130/357 (36%), Gaps = 27/357 (7%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ R + + ++ I + ++ + +S L I G+ +P L ++ Sbjct: 5 RYLSREVLLTLSAVSAVLLVIIMSGRFIKYLAQAASGALDPGSLFLIMGFRLPGFLQLIL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + + ++E+ ++ TG S+ L + LF A L+++ + + P+ Sbjct: 65 PLGLFLGILLAYGRLYLDSEMTVLSATGMSQQRLFRMTLFPATLVALVVAWLSLSLAPQG 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYNPNNT-LQGIFI------VD 177 + + L + F L F L D + + + + L G+FI D Sbjct: 125 ATQFQLLINQQDAMTEFDTLVPGRFQALRDGTRVTYTEQLSDDRIDLGGVFITQKNLSSD 184 Query: 178 SRDTQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 ++ + + A+ G +++ +IL +G + P D +K+ +Y + Sbjct: 185 AKKDRGISVLVAEKGRQEINPDGNRYLILENGYRYDGKPGQADYRAIKYDTYGVLLPKPE 244 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 S V + + LL + R+E RL+ L I L+++ Sbjct: 245 VSDEVTDRDAMPTASLLGNDD----------IRARTELQWRLSLPLLVFIVTLMAVP--L 292 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 R RQ + + + L + + + P L L+ + SIFL Sbjct: 293 SRVNPRQGRFLKLLPAIL--LYMAYLTILISARGALEKGKIPPAL--GLWWVHSIFL 345 >gi|288940756|ref|YP_003442996.1| permease YjgP/YjgQ family protein [Allochromatium vinosum DSM 180] gi|288896128|gb|ADC61964.1| permease YjgP/YjgQ family protein [Allochromatium vinosum DSM 180] Length = 380 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 60/361 (16%), Positives = 134/361 (37%), Gaps = 29/361 (8%) Query: 10 RCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCF 69 R + FL L +V I + L+ + V+ ++++ + I + + P F Sbjct: 17 REAAQVFLAIVLVLVLILASLMFLRTLEEVNLGGLGVDVVFRYLSLQIQRDISSLLPPAF 76 Query: 70 AMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTI 129 + L R++EL+ + G L + L LA+ ++ ++P + I Sbjct: 77 FLAILVTLARFARDSELIAMQACGVGPPRLYRTFLLLAVPVAFVTGWVALDLKPHAAAGI 136 Query: 130 KQ-LSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 +Q + + A + L+ F+ + + + I + + + L +F++D R +T + Sbjct: 137 QQIRLQQKEQAAQIAGLQAGRFYVEEQGKVVVYIGEIDQHKLLGDVFVLDRRGEKTRLVV 196 Query: 188 YAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 + SG ++ + L G S I F+ Y ++ A S+ Sbjct: 197 -SDSGRHRIEESTGDHLVTLTQGHRFDGQAGSGAYLIGDFERYEIRLADAGSAPHAFNKR 255 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 P P + + EL + R E RL L + +++I D R Sbjct: 256 A------TIPTP-DLMHSDELAD--RVELEHRLAAPLSILTLAVLAIPLVDPSPRQRTTG 306 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQ------NPYYIPILYLFLFCISSIFLLMIKKK 357 ++ ++ ++ F + E P ++ L+ L + + L+++ + Sbjct: 307 RM-------LLALLAYFSFFNLQRLAESWMAAGVTPAWLGSLWYQLAILVFVHLMLLPEN 359 Query: 358 Y 358 + Sbjct: 360 F 360 >gi|240113703|ref|ZP_04728193.1| hypothetical protein NgonM_09082 [Neisseria gonorrhoeae MS11] gi|268599771|ref|ZP_06133938.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11] gi|268583902|gb|EEZ48578.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11] Length = 396 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 46/365 (12%), Positives = 145/365 (39%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ +++ + + + + ++ + Q + + + +++ +L + G+ + + P Sbjct: 27 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTP 86 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ +I + + + + Sbjct: 87 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAILIAVMQLWVI 146 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLD--DDLYIKISKYN-PNNTLQGIFIVDSR 179 P ++ + + S +E F L + + ++ + ++ +F+ + Sbjct: 147 PWAELRNREYAEILKQKQELSLVEAGEFNNLGKRNGRVYFVETFDTESGIMKNLFLREQD 206 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE-SANSS 236 I +A+ G S++ +++ + L G + +P D + + F+ L + Sbjct: 207 KNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTTPKLI 266 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + + L+ +NP ++ +E R++ + L+ ++A Sbjct: 267 DPVSHRRTISTAQLIG--SSNPQHQ--------AELMWRISLTV---SVLLLCLLAVPLS 313 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP--YYIPILYLFLFCISSIFLLMI 354 + + I I++ + G + + +E +++ +L + + +L+ Sbjct: 314 YFNPRSGHTYNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFVIAIVLLR 373 Query: 355 KKKYT 359 + Sbjct: 374 VRSMP 378 >gi|83721258|ref|YP_441378.1| permease [Burkholderia thailandensis E264] gi|167580136|ref|ZP_02373010.1| permease, putative [Burkholderia thailandensis TXDOH] gi|257139949|ref|ZP_05588211.1| permease, putative [Burkholderia thailandensis E264] gi|83655083|gb|ABC39146.1| permease, putative [Burkholderia thailandensis E264] Length = 365 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 56/365 (15%), Positives = 133/365 (36%), Gaps = 22/365 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ I +++ + +S + +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTIMLTSMMIRIVGYAASGEVNPKDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M+ + VLT +++E+++ +G S LIKP+ A + I + + Sbjct: 62 MILVGTLFVSILFVLTRWYKDSEMVVWLASGVSLTRLIKPIGVFATPIVILIAFFAFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNN-TLQGIFIVDSRD 180 P K + A+ Q S L F + I K +P+ +Q +F+ + Sbjct: 122 PWSNQQSKLIKARFQQRDEVSLLAPGQFRESAANHRVFFIEKMSPDQAKVQNVFVTTTEH 181 Query: 181 TQTHKIY--YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + + + ++ + I+L +G + P + IM+F+ Y ++ +S + Sbjct: 182 GKVNVVVSQTGHTETMKNGDRFIVLENGRRYDGVPGQPNFKIMEFERYGVKIQSKQVVSQ 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 L NP N +EF R L + +++I A Sbjct: 242 PTTTGTSTPDLLRNPTNQNL-----------AEFAWRAGLPLIAINLMILAIPLA---YQ 287 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI----LYLFLFCISSIFLLMI 354 +R + + +++ I + + ++E+ + L+ + + + + Sbjct: 288 NPRRGRTVNLVMAVLIYLTYSNLLNVVQSQMERGKIPFGLGLIGLHAIIAGVVAFLFWLR 347 Query: 355 KKKYT 359 + Sbjct: 348 VRNRP 352 >gi|289523522|ref|ZP_06440376.1| membrane protein, YjgP/YjgQ family [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503214|gb|EFD24378.1| membrane protein, YjgP/YjgQ family [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 369 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 60/350 (17%), Positives = 125/350 (35%), Gaps = 15/350 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQIL-QRINLVSSSTESLNILLKISGYLIPTV 60 + + +I+ +F+ + + +L +L+ S +I++++ Y +P V Sbjct: 9 RLLDKFIITEFYPTFVFGVMVFTVLLVAGDLLFDIADLLIQSRVPFSIVIRLFVYRLPGV 68 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + T + +EL + +G S +++PV +IL+ F + Sbjct: 69 IVLTLPMAALLATILSFGKLATQSELTALRASGISFYRILRPVFLASILIGGFALLLNET 128 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD----LYIKISKYNP-NNTLQGIFI 175 + P + S L+E +F + + D I I K P + + I Sbjct: 129 LVPLADRAADNIMRYEVARQKPSLLKEQMFLKEERDGALSRVIYIGKLFPQEGNMDDVLI 188 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKS--YTLQTESA 233 + + +I A++G D L +G+V + + F+ +L + Sbjct: 189 QEFESGEITRILTAKNG--DWKEGQWWLYNGQVFNVTKEGFVEPLFSFEKQQLSLPLSPS 246 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 T + L N N + + + H RL V+ L+ A Sbjct: 247 QVVTSSQDPKKMSAFELYN-YIKLMNVQGSDVNSLWVLLHLRLAVPWASVVLALVG---A 302 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 A R+ I +S+ + F + F + Q Y P+L ++ Sbjct: 303 SVGAGTRRSGSGMGIGVSILLVFAYYV-FMSFCRSLGQGGYIPPLLAAWM 351 >gi|326423843|ref|NP_760389.2| hypothetical protein VV1_1477 [Vibrio vulnificus CMCP6] gi|319999213|gb|AAO09916.2| Putative membrane protein [Vibrio vulnificus CMCP6] Length = 366 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 53/357 (14%), Positives = 126/357 (35%), Gaps = 25/357 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + Q + + S ++++ I +P++ Sbjct: 2 IIVRYLIRETLKSQFAIFFVLFLVFLSQQFISVLADASDGDIPASLIMSIVALNMPSMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+++++ TG LI+ L+LA++ S + + Sbjct: 62 LMLPLSLYIGILITFGRLYAESEIVVMNATGIGNKFLIQAALYLAVITSGVAAFNSLWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RD 180 P ++QL+ + + L++ F D + + L +F+ RD Sbjct: 122 PWSMDRVEQLTEQVAAENSVDLLKKGQFQFTPDRSSVVFIDDIKDKQLSNVFVAQLMPRD 181 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + +A G + RQ I + G + P + I +F+ Y + Sbjct: 182 SILPSVMFANGGEVKELSDGRQIISMKQGTRYEGVPTRVEYMITEFEQYDGLIGQRSVKQ 241 Query: 238 IVLKANDQNLSFLL-NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L+ NP+P ++E R++ + L++++ Sbjct: 242 RGRDWDAIPTLELIGNPDPE-----------AQAELQWRVSL-FVCI--PLLTMLVIPLS 287 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-----NPYYIPILYLFLFCISS 348 A+ ++ + + ++ I F S +E+ + PI L L Sbjct: 288 AVSPRQGRFAKMGPAILIYLAYFLSISATKSALEEGDISASIGMWPINGLLLLVAIM 344 >gi|90416560|ref|ZP_01224491.1| hypothetical protein GB2207_05142 [marine gamma proteobacterium HTCC2207] gi|90331759|gb|EAS46987.1| hypothetical protein GB2207_05142 [marine gamma proteobacterium HTCC2207] Length = 370 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 56/369 (15%), Positives = 125/369 (33%), Gaps = 24/369 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R I + C+ ++ + + ++ + + N + + GY IP+ L Sbjct: 2 IIFRYLCREILSATTAVCVILLLVLMSGRFVKYLGKAVAGDMDSNSIFAMIGYRIPSFLE 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P F + + E+ ++ G S L+ L +A + ++ + Sbjct: 62 LTLPLAFFLAVLLSFGRLYVQNEMSVLKACGVSERRLMGYTLIIASVFALATGWLSLSVS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNNTLQGIFIV----- 176 P + + L + L F+ L + L IF+ Sbjct: 122 PSGMTKAEALFDAEKSRSELDKLMPKKFYSLSGGKGVTYAEAVTEDRELDEIFLAMTAGS 181 Query: 177 DSRDTQTHKIYYAQSGSI----DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 D + + A G + + +++ G P D I +F+ Y + E Sbjct: 182 DENSDRRLILVLADKGRQQQAENSSERYLVMESGYRIEGVPGQNDYQITRFEEYGSRLED 241 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + S K + LL N+P + L RL+ L ++ ++++ Sbjct: 242 SAPSIRKTKTDAMATGLLLG--SNDPELQATLQ--------WRLSIPLMVLVVTILAVP- 290 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCI-SSIFL 351 R RQ + + ++++ F + + +E I + L + + I + Sbjct: 291 -LSRTNNRQGRY-GKLLPAIALYFTYLVALNAMRGALESGAIPISVTLLPVHAVYLGIAV 348 Query: 352 LMIKKKYTK 360 L+++ K Sbjct: 349 LLLRSGGPK 357 >gi|186681603|ref|YP_001864799.1| permease YjgP/YjgQ family protein [Nostoc punctiforme PCC 73102] gi|186464055|gb|ACC79856.1| permease YjgP/YjgQ family protein [Nostoc punctiforme PCC 73102] Length = 391 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 47/359 (13%), Positives = 128/359 (35%), Gaps = 22/359 (6%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + Y+ + F + + + + + S ++I +++ P Sbjct: 19 TIMDRYLTSELIAPFFFGVGAFSSLGVTIDAVFDLVRKIVESGLPIDIAIQVFLLKFPNF 78 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + T + ++ +EL+ + G S ++ + L+++++ F+ Sbjct: 79 IVLAFPMSTLLATLMTYSRLSSESELIALRGCGVSVYRIVLTAVMLSLVVTGMTFVFNEQ 138 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLY-------------IKISKYNPN 167 I P KA + ++ ++N+F+ D+ +++ Sbjct: 139 IAPAANYQAGVTLDKALKSDKPAFKQQNIFYPEYQDVIQPDGSKNRILTRLFYADQFD-G 197 Query: 168 NTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 + G+ I+D ++I ++S + + +G ++ + +I++F+ Sbjct: 198 KRMTGLTIIDRSTKNLNQIVVSESAQWNPSQNIWDFYNGTIYFVAADRSYRNIVRFEHQQ 257 Query: 228 LQTESANSS--TIVLKANDQNLSFLLNPNP-NNPNYRPELLETYRSEFHKRLTQWLFPVI 284 LQ S + N+S L+ + + ++++ V+ Sbjct: 258 LQLPRTPLSLAEKSRDYGEMNISEALDQLQVEYLGGDRQKIRKLEVRIQQKISLPFVCVV 317 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 F +V A ++ ++ + IS+ + F + F +I I Q P + +L Sbjct: 318 F---GLVGAAMGSIPQRTGRGTSFGISVVVIFSYYLIF-FISGAIAQAGALSPFMGAWL 372 >gi|304311789|ref|YP_003811387.1| Predicted permease YjgP/YjgQ family [gamma proteobacterium HdN1] gi|301797522|emb|CBL45742.1| Predicted permease YjgP/YjgQ family [gamma proteobacterium HdN1] Length = 369 Score = 147 bits (370), Expect = 4e-33, Method: Composition-based stats. Identities = 55/366 (15%), Positives = 134/366 (36%), Gaps = 22/366 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + + L +V I + ++ + + + ++ + Y +P L Sbjct: 2 IIYRYLSRQLLVTTLAVTGVLVLILMGGRFIKYLGGAADGVLTGALIFWVMLYKLPGFLE 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + M E+++++ G SR L+K L A+ ++ + N + Sbjct: 62 LILPLGLFLGILLSYGRMYLENEMVVLEACGMSRGALVKHTLMPALCTALIVGFIANYVS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYNPNN-TLQGIFI--VDS 178 P C + + + + + L F + + + I + + +Q +FI + Sbjct: 122 PLCNTKAQTMLDEQKRKSALELLSPGQFHATRNAMTVTYIEDIDGKHKEMQNLFIVNYNQ 181 Query: 179 RDTQTHKIYYAQSGSI----DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + + +I A+ G D + +++ +G S + F Y L+ + Sbjct: 182 ANPEKIEITRAKRGDYQIHEDTGARYLVMKEGYRFEGSAGMAKFNRTAFDVYQLKLDPPR 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 I + + + L+ E R+E R+ PV+ +I+ +A Sbjct: 242 PLEIEGQYTLMSDAQLV----------LEGSLAARAELQWRMA---LPVLVPIIAYLAVI 288 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + ++ + + S+ + + +KI + P L L+ I+ L + Sbjct: 289 LSKVNPRQGRYMKLLPSIVLYLVYLSLLLAVKNKIAK-GKMDPELSLWAVHIAFFLLAVF 347 Query: 355 KKKYTK 360 K+++ Sbjct: 348 MHKWSE 353 >gi|260914418|ref|ZP_05920887.1| inner membrane protein YjgP [Pasteurella dagmatis ATCC 43325] gi|260631519|gb|EEX49701.1| inner membrane protein YjgP [Pasteurella dagmatis ATCC 43325] Length = 368 Score = 147 bits (370), Expect = 4e-33, Method: Composition-based stats. Identities = 41/314 (13%), Positives = 123/314 (39%), Gaps = 18/314 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + +S + ++ I + Q+++ + ++ +++L + G +PT+ Sbjct: 2 ILTRYLIKEVFKSQIAILFILLLIFFCQQLVRVLGSAANGKVPADLVLSLLGLGMPTMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P C + + +E+ ++ G + L++ V+ L++L + + + Sbjct: 62 LMLPLCLFIAILLTFGRLYAESEITVMRACGVGQRILVRVVMLLSLLTASIATYNVFWLT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + ++ +A+ T L F + + ++ +N + +++ +R+ Sbjct: 122 PWAINKQSEILQEAKANPTMGALAAGQFISTNSNEFVLFIDKIVDNQINDVYLFQTRERG 181 Query: 183 T--HKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G + Q + L + E S D I F Y + + Sbjct: 182 NLKPAVLVAERGELKSLPNGDQILTLENSERVEGSAALPDFRITHFDEYQAYLGHQDINN 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +A + +++ LLN ++E + R++ + L++++A Sbjct: 242 EKNEAEELSVNELLNSTSP----------AAKAELNWRVS---LVLAVPLMALIAVPLSR 288 Query: 298 LVRQRKKIHPIFIS 311 + ++ + + + Sbjct: 289 VNPRQGRFAKVLPA 302 >gi|167618242|ref|ZP_02386873.1| permease, putative [Burkholderia thailandensis Bt4] Length = 365 Score = 147 bits (370), Expect = 4e-33, Method: Composition-based stats. Identities = 55/365 (15%), Positives = 133/365 (36%), Gaps = 22/365 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ I +++ + +S + +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTIMLTSMMIRIVGYAASGEVNPKDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M+ + VLT +++E+++ +G S LIKP+ A + I + + Sbjct: 62 MILVGTLFVSILFVLTRWYKDSEMVVWLASGVSLTRLIKPIGVFATPIVILIAFFAFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNN-TLQGIFIVDSRD 180 P K + A+ Q S L F + I K +P+ +Q +F+ + Sbjct: 122 PWSNQQSKLIKARFQQRDEVSLLAPGQFRESAANHRVFFIEKMSPDQAKVQNVFVTTTEH 181 Query: 181 TQTHKIY--YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + + + ++ + I+L +G + P + IM+F+ Y ++ ++ + Sbjct: 182 GKVNVVVSQTGHTETMKNGDRFIVLENGRRYDGVPGQPNFKIMEFERYGVKIQNKQVVSQ 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 L NP N +EF R L + +++I A Sbjct: 242 PTTTGTSTPDLLRNPTNQNL-----------AEFAWRAGLPLIAINLMILAIPLA---YQ 287 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI----LYLFLFCISSIFLLMI 354 +R + + +++ I + + ++E+ + L+ + + + + Sbjct: 288 NPRRGRTVNLVMAVLIYLTYSNLLNVVQSQMERGKIPFGLGLIGLHAIIAGVVAFLFWLR 347 Query: 355 KKKYT 359 + Sbjct: 348 VRNRP 352 >gi|119486322|ref|ZP_01620381.1| hypothetical protein L8106_16749 [Lyngbya sp. PCC 8106] gi|119456535|gb|EAW37665.1| hypothetical protein L8106_16749 [Lyngbya sp. PCC 8106] Length = 392 Score = 147 bits (370), Expect = 4e-33, Method: Composition-based stats. Identities = 61/380 (16%), Positives = 143/380 (37%), Gaps = 28/380 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPT 59 + + YI+ + FL +A + + + V+ S + I ++I +P Sbjct: 19 LSILDRYIISELIAPFLFGVGLFTSVALSIDTVFDLVRKVAESGLDVGIAMQIFLLKMPE 78 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + + P + T V M+ ++E++ + + G S L+ P L ++ ++ +F+ Sbjct: 79 FVVLSFPMSMVLTTLIVYGRMSSDSEIVALRSCGISIYRLVIPTLIFSLFITASMFVFNE 138 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFF---------RLDDDLYIKISKYNP---- 166 +I P +A EEN+F+ D+++ I + + Sbjct: 139 LIVPATNYRASITLEQALHQDRLPVQEENIFYPEYRTIPIEDSDEEITILVRLFYAQEFD 198 Query: 167 NNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSY 226 + + I+D +I ++S + +Q+ DG V+ P +I++F Sbjct: 199 GKYMNEVTILDKSQQGITQIISSESAVWNGKQQSWDFFDGTVYMIDPKGSYRNIIRFDHK 258 Query: 227 TLQTE--SANSSTIVLKANDQNL---SFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLF 281 L+ + ++ + ++ N+ L ++ N + R + ++ + Sbjct: 259 ELKLPRVPLDLASRKRRYDEMNIVQAHEYLELMKSSGNEKIVQKTKVRIQ--QKYSLPFV 316 Query: 282 PVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL 341 V+FGL+ A + ++ + IS+ I F + ++I + Q P L Sbjct: 317 CVVFGLLG---AALGSQHQRTNRSTSFGISIVIIFSYYM-LAFITGAMGQKAIISPFLAG 372 Query: 342 FL---FCISSIFLLMIKKKY 358 +L + + + K Sbjct: 373 WLPIVIGLGASGFFLYKNSR 392 >gi|302392908|ref|YP_003828728.1| permease [Acetohalobium arabaticum DSM 5501] gi|302204985|gb|ADL13663.1| permease YjgP/YjgQ family protein [Acetohalobium arabaticum DSM 5501] Length = 364 Score = 147 bits (370), Expect = 4e-33, Method: Composition-based stats. Identities = 61/354 (17%), Positives = 138/354 (38%), Gaps = 19/354 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQIL-QRINLVSSSTESLNILLKISGYLIPT 59 MK + Y+L + L I IL + +L+ S ++ +P Sbjct: 1 MKIIDRYLLTELLSPLLFGIFAFTSIFVGTDILFELADLMIEWGVSAVTAGQLFILSLPE 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 V+ + P + T ++ ++E++ + G S I LI PVL +A+LLS ++ Sbjct: 61 VIVLTFPMSMLLATLLSFGRLSGDSEVVALKAGGVSFIRLIIPVLIVALLLSGLTILANE 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKY-------NPNNTLQG 172 I P+ + +++ + ++NL D KI + T++ Sbjct: 121 TIVPQSKDAYRRIVWNIKHQEKMPTTQKNLRIAPLDKKTGKIDYIFYAYHFDGSDLTMEE 180 Query: 173 IFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 + + D ++ + ++ A+ +R I DG ++ + K ++ +F++YT++ + Sbjct: 181 VSLQDYQNGKLVQVIEAKRARWTDERWQFI--DGTIYNVNSKDKVPTM-EFETYTVKKLN 237 Query: 233 ANSSTIVL---KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 I ++ ++ L N + N + + + + +++R IF LI Sbjct: 238 REPKEISRAQKDPDEMSIEEL-NRHINLKEEEGKDVASLKVLYYQRYAIPFSCFIFALIG 296 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 + + + +S+ I F +++ I + Q P + +L Sbjct: 297 APLGLQPN---RSGASIGLGLSIVIIF-IYYTLMTIGSTLGQTGTLPPAVGAWL 346 >gi|307299316|ref|ZP_07579117.1| permease YjgP/YjgQ family protein [Thermotogales bacterium mesG1.Ag.4.2] gi|306915112|gb|EFN45498.1| permease YjgP/YjgQ family protein [Thermotogales bacterium mesG1.Ag.4.2] Length = 1438 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 50/344 (14%), Positives = 123/344 (35%), Gaps = 5/344 (1%) Query: 13 GRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAME 72 S + + + + +++ ++ L + Y +P + + P + Sbjct: 1 MGSIFVGLAGFIIFVSLELLYYLSDMIIRYKVGIDKLFLLIYYNLPEFIVLGIPVGILLA 60 Query: 73 TTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQL 132 VL+ M + EL+ + G S L+ P L + I+ S F ++ + + P + + Sbjct: 61 IFWVLSRMRSDNELIALQTHGISLKRLVIPFLLIGIIFSGFAYLLNDYLVPAASTKANEA 120 Query: 133 SAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSRDTQTHKIYYAQS 191 A+ L+EN+F + I + + + + L+ + I + Q A+S Sbjct: 121 MARFVYKQPEVTLKENVFMQDSQGRMIYVRRIDQDTKELKNVSIYEVSRGQVTLT-TAES 179 Query: 192 GSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV-LKANDQNLSFL 250 I ++ IL+ +++ M+F + + + + K+ + S Sbjct: 180 AVISSNK--WILSKANIYQTDESGFLGVEMQFGTAEFEIDEDIERYLASFKSPKEKTSKE 237 Query: 251 LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFI 310 L + + ++ + + P++ L+ + + L + + F+ Sbjct: 238 LRDDIEAFKNTGINTSSLEVALQEKYSMSIAPLVIVLLGVPVSLMFNLQSKSWSVILTFL 297 Query: 311 SLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + I G S + + NP P + F I + + + Sbjct: 298 LVVIYQGSGAWLSGMGKENLINPSLAPWIPNITFSILGVIIYSL 341 >gi|329894348|ref|ZP_08270218.1| putative permease [gamma proteobacterium IMCC3088] gi|328923144|gb|EGG30467.1| putative permease [gamma proteobacterium IMCC3088] Length = 372 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 55/365 (15%), Positives = 129/365 (35%), Gaps = 26/365 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R I + L + + + Q ++R+ V+ + L I + IP+ L Sbjct: 2 LIVRYLTRDILVNTSAVSLVVFLVVFSSQFVRRLADVAEGDLAAGFLASIMFFSIPSYLE 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + L + ++E++++ +G L++ VL +++I + Sbjct: 62 LILPLGFFVGLMLALGRLYTDSEMVVLSASGIGPWHLLRWVLVSGAVVAILSAGLSLGLT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNNT-LQGIFIVDS-- 178 P ++ + L +A + F R + L+G+F+ + Sbjct: 122 PWTKTKVLNLVTEASNEKGLAAFVPGRFQRRSGGFDTFYAESVESDQQGLKGLFVAEQGM 181 Query: 179 RDTQTH--KIYYAQSGSIDL----DRQAIILNDGEVHRKSPISKDISIMKFKSYT--LQT 230 I YA+ G + + + L +G ++ P + + +F+ L Sbjct: 182 SSAGEPLVTITYAERGRVVSSQEHGGRYLELLNGRRYQGQPGQLEYRVTEFEVLGERLPD 241 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 + S D + +L + N+ + + H RL+ L P ++ Sbjct: 242 ADSAGSAFGDDLYDALPTQMLFLDNNSAST---------ATLHWRLSLVLMPFN---LAF 289 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI--LYLFLFCISS 348 +A R+R + + ++ + G + + + + L+ + I Sbjct: 290 LALGLARTDRRRGRYTMLLPAIVLYLVYLVGLASLRGAAAEGASVGSLWGLHAVIAGIGC 349 Query: 349 IFLLM 353 + LL Sbjct: 350 VVLLW 354 >gi|325103111|ref|YP_004272765.1| permease YjgP/YjgQ family protein [Pedobacter saltans DSM 12145] gi|324971959|gb|ADY50943.1| permease YjgP/YjgQ family protein [Pedobacter saltans DSM 12145] Length = 476 Score = 146 bits (369), Expect = 5e-33, Method: Composition-based stats. Identities = 46/256 (17%), Positives = 104/256 (40%), Gaps = 9/256 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK L I++ + F ++ ++F+ ++ + + I+ + ++L++ GY T Sbjct: 1 MKKIHLLIVKAFIKPFFVTFFIVMFVLLMLFLFKYIDDLIGKGFEWYVILQLLGYAAATN 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + ++ N EL+ I + G S + P+ + LSI FI + Sbjct: 61 VAMALPLAVLLSSIMTFGNLGENYELVAIKSAGISLQRAMAPLFIMVTGLSIAAFIFSDY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVD-S 178 + P + L + +EE +F I++ + + + TL+ + I D + Sbjct: 121 MLPVANLKMGSLLYDVRNQKAAFLIEEGVFNNSIPGYSIRVEQKDKDGKTLKDVVIYDHT 180 Query: 179 RDTQTHKIYYAQSGSIDLDRQ----AIILNDGEVHRKSPISKDIS-IMKFKSYTLQ--TE 231 + + + A +G + ++L G + +S + + + Y + Sbjct: 181 KGSGNTNVLMADTGEMYKTDDEKYLVLVLKHGVRYEESAGQRTYNPRERLVRYKFDETMQ 240 Query: 232 SANSSTIVLKANDQNL 247 + S+ K D+NL Sbjct: 241 KFDLSSFNFKREDENL 256 Score = 40.7 bits (94), Expect = 0.38, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 48/96 (50%), Gaps = 6/96 (6%) Query: 263 ELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGF 322 +++ Y E++++ T + ++ I A A++R+ P+ +S+ I F ++ Sbjct: 359 KVITRYIIEYNRKFTLSVSCLVLFFIG---APLGAIIRKGGLGLPVVVSV-IFFLIYHII 414 Query: 323 SYIIHKIEQNPYYIPI--LYLFLFCISSIFLLMIKK 356 S I K+ ++ P+ +++ +F ++ + L + K Sbjct: 415 STIGEKMARDGTISPLLGMWIAIFVLTPLGLFLTYK 450 >gi|320155252|ref|YP_004187631.1| putative permease [Vibrio vulnificus MO6-24/O] gi|319930564|gb|ADV85428.1| predicted permease [Vibrio vulnificus MO6-24/O] Length = 366 Score = 146 bits (369), Expect = 5e-33, Method: Composition-based stats. Identities = 53/357 (14%), Positives = 126/357 (35%), Gaps = 25/357 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + Q + + S ++++ I +P++ Sbjct: 2 IIVRYLIRETLKSQFAIFFVLFLVFLSQQFISVLADASDGDIPASLIMSIVALNMPSMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+++++ TG LI+ L+LA++ S + + Sbjct: 62 LMLPLSLYIGILITFGRLYAESEIVVMNATGIGNKFLIQAALYLAVITSGVAAFNSLWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RD 180 P ++QL+ + + L++ F D + + L +F+ RD Sbjct: 122 PWSMDRVEQLTEQVAAENSVDLLKKGQFQFTPDRSSVVFIDDIKDKQLSNVFVAQLMPRD 181 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + +A G + RQ I + G + P + I +F+ Y + Sbjct: 182 SILPSVMFANGGEVKELSDGRQIISMKQGTRYEGVPTRVEYMITEFEQYDGLIGQRSVKQ 241 Query: 238 IVLKANDQNLSFLL-NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L+ NP+P ++E R++ + L++++ Sbjct: 242 RGRDWDAIPTLELIGNPDPE-----------AQAELQWRVSL-FVCI--PLLTMLVIPLS 287 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-----NPYYIPILYLFLFCISS 348 A+ ++ + + ++ I F S +E+ + PI L L Sbjct: 288 AVNPRQGRFAKMGPAILIYLAYFLSISATKSALEEGDISASIGMWPINGLLLLVAIM 344 >gi|89075941|ref|ZP_01162316.1| putative permease [Photobacterium sp. SKA34] gi|89048382|gb|EAR53960.1| putative permease [Photobacterium sp. SKA34] Length = 366 Score = 146 bits (369), Expect = 5e-33, Method: Composition-based stats. Identities = 56/363 (15%), Positives = 131/363 (36%), Gaps = 21/363 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R +S L + + + + + + + +++L G IP++ Sbjct: 2 IIVRYLTRETLKSQLAVLFVLFLVFISQKFISILADATDGSIPSDLILTFMGLSIPSMAL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG L++ L LAI+ ++ + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGMGNKLLLQSALALAIITGSIAAVNAFWVA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNN-TLQGIFIVD--S 178 P + I+QL + + T + L + F + + I I L +F+ + Sbjct: 122 PWSQEHIEQLKEETKAGPTLNMLVKGTFQQAPNGSGVIFIDNITDKGSRLHKVFVAQLKA 181 Query: 179 RDTQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 DT + A +G++ RQ + LNDG + P + SI F Y Sbjct: 182 TDTLQPSVMVADNGTVKELSDGRQMLELNDGARYEGIPTQLNYSITHFNDYQALIGQREV 241 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 Q L+ + ++E R + +F + L+ ++ Sbjct: 242 KAGDRDWEAQPTMTLI----------KDKSLAAKAELQWRFSL-VFCI--PLLVMIVVPL 288 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 A+ ++ + + ++ I F S IE + ++ ++ I+++ + + Sbjct: 289 SAVNPRQGRFAKLAPAVLIYLAYFLAISSAKSAIE-DGIIPSVIGMWPINITTLLVALAL 347 Query: 356 KKY 358 + Sbjct: 348 NSW 350 >gi|325578600|ref|ZP_08148700.1| inner membrane protein YjgP [Haemophilus parainfluenzae ATCC 33392] gi|325159836|gb|EGC71966.1| inner membrane protein YjgP [Haemophilus parainfluenzae ATCC 33392] Length = 363 Score = 146 bits (369), Expect = 5e-33, Method: Composition-based stats. Identities = 44/356 (12%), Positives = 120/356 (33%), Gaps = 17/356 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + +S + ++ I + Q+++ + ++ +++ + G +PT+ Sbjct: 2 ILTRYLTKEVFKSQIAILFILLLIFFSQQLVRVLGSAANGKVPADLVFSLLGLGMPTMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P C + + +E+ ++ G + L++ L L++ + + + Sbjct: 62 LMLPLCLFIAILLTFGRLYAESEITVMRACGVGQRILVRVALILSLFTAGLAAYNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + A+ T L F ++ ++ N + +++ + Sbjct: 122 PWAIQKQAAIVEDAKANPTMGALTSGQFMSTSNNNFVLFIDKINGNQISDVYLFQMKAKG 181 Query: 183 --THKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G + Q + L + + + D I F Y ++T Sbjct: 182 QTKPSVVTAEKGELKALPNGDQVLNLQNTLRVEGTSVLPDFRITHFDDYQAYLGHQETNT 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +A + + LL + ++E H R+T L + LI++ + Sbjct: 242 ESDEAAELSFEQLL----------KDKSSAAKAELHWRITLILAVPLMALIAVP--MSKV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 RQ + + L S+ ++ L + +++ Sbjct: 290 NPRQGRFAKILPALLLYLIYFLLQSSFKSAGGAGKLDAGLLMPLVNIAFLILGIVL 345 >gi|259907066|ref|YP_002647422.1| Putative permease [Erwinia pyrifoliae Ep1/96] gi|224962688|emb|CAX54143.1| Putative permease [Erwinia pyrifoliae Ep1/96] gi|283476866|emb|CAY72714.1| Inner membrane protein yjgP [Erwinia pyrifoliae DSM 12163] Length = 366 Score = 146 bits (369), Expect = 5e-33, Method: Composition-based stats. Identities = 51/337 (15%), Positives = 120/337 (35%), Gaps = 22/337 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGEIPTNLVLTLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G + L+K + L + ++ ++ + Sbjct: 62 LILPLSLFLAILMTLGRLYTESEITVMHACGLGKSVLVKAAMILMLFTALLAAVNVGWLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+ + L F + D + + NT +F+ R Sbjct: 122 PWSSRYQNEVMQNAKANPGAAALAAGQFQQSGDGQSVLFIENVKGNTFSNVFLAQLRPKG 181 Query: 183 T--HKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + AQ G + Q + L+ G + + +D I FK+Y + Sbjct: 182 NARPSVVVAQQGHMEQRVDGSQIVTLDSGTRFEGTALLRDFRITDFKNYQAIIGHQAVTL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + +L L + + + +RSE H RLT +I L+ + Sbjct: 242 DPNDSEQMSLDTLWHSDKPD----------FRSELHWRLTLVFSVLIMALMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY 334 RQ + +S+ + ++ F + + + Sbjct: 290 NPRQGR-----VLSMLPAMLLYLVFFLLQSSMRSSGS 321 >gi|126439084|ref|YP_001058064.1| hypothetical protein BURPS668_1014 [Burkholderia pseudomallei 668] gi|126218577|gb|ABN82083.1| putative membrane protein [Burkholderia pseudomallei 668] Length = 365 Score = 146 bits (369), Expect = 5e-33, Method: Composition-based stats. Identities = 56/365 (15%), Positives = 134/365 (36%), Gaps = 22/365 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ I +++ + +S + +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTIMLTSMMIRIVGYAASGEVNPKDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M+ + VLT +++E+++ +G S LIKP+ A + I + + Sbjct: 62 MILVGTLFVSILFVLTRWYKDSEMVVWLASGVSLTRLIKPIGVFATPIVILIAFFAFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNN-TLQGIFIVDSRD 180 P K + A+ Q S L F + I K + + +Q +F+ + Sbjct: 122 PWSNQQSKLIKARFQQRDEVSLLAPGQFRESAANHRVFFIEKMSSDQAKVQNVFVTTTEH 181 Query: 181 TQTHKIY--YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + + + ++ + I+L +G + P + IM+F+ Y ++ +S + Sbjct: 182 GKVNVVVSQTGHTETMKNGDRFIVLENGRRYDGVPGQPNFKIMEFERYGVKIQSKQIVSQ 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 L NP N +EF R L + +++I A Sbjct: 242 PTTTGTSTPDLLRNPTNQNL-----------AEFAWRAGLPLIAINLMILAIPLA---YQ 287 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI----LYLFLFCISSIFLLMI 354 +R + + +++ I + + ++E+ + L++ + I ++ + Sbjct: 288 NPRRGRTVNLVMAVLIYLTYSNLLNVVQSQMERGKIAFGLGLIGLHVIVAGIVALLFWLR 347 Query: 355 KKKYT 359 + Sbjct: 348 VRNRP 352 >gi|300718541|ref|YP_003743344.1| permease [Erwinia billingiae Eb661] gi|299064377|emb|CAX61497.1| putative permease [Erwinia billingiae Eb661] Length = 366 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 53/358 (14%), Positives = 123/358 (34%), Gaps = 21/358 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGEIPTNLVLTLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + L + +I ++ + Sbjct: 62 LILPLSLFLAILMTLGRLYTESEITVMHACGLSKAVLVKAAMVLMLFTAIVAAVNVAWLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +++ A+ + L F + D + + N +F+ R Sbjct: 122 PWSSRYQSEVTQNAKANPGAAALAAGQFQQSGDGQSVMFIENVKGNNFGNVFLAQLRPKG 181 Query: 183 T--HKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A G + + L+ G + + +D I F++Y + Sbjct: 182 NARPSVVLADKGHMTQGPDGSQIVTLDKGTRFEGTAMLRDFRITDFENYQAIVGHQDVVL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 A + L + +RSEFH RLT ++ L+ + Sbjct: 242 DPNDAEQMDFKTLAQSDKP----------EFRSEFHWRLTLVFSVLVMALMVVP--LSVV 289 Query: 298 LVRQRKKIH--PIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 RQ + + P + I F + K +P +++ + +L+ Sbjct: 290 NPRQGRVLSMLPAMLLYLIFFLLQSSLRSSGQKARLDPALW--MWVVNLSYLGLAVLL 345 >gi|219871563|ref|YP_002475938.1| permease [Haemophilus parasuis SH0165] gi|219691767|gb|ACL32990.1| permease, inner membrane protein yjgP [Haemophilus parasuis SH0165] Length = 366 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 53/356 (14%), Positives = 123/356 (34%), Gaps = 19/356 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + I +S + ++ I + Q+++ ++ S +++L + G +PT+ Sbjct: 2 ILSRYLTKEIFKSQIAILFILLVIFFCQQLVRVLSSAVSGKVPTDLVLSLLGLGMPTMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L +E+ ++ G + L+K LFL+I + + + Sbjct: 62 LMLPLSLFIALLLTLGRFYAESEITVMRACGVGQSLLVKAALFLSIFTTAVAVYNVFWLT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV--DSRD 180 P + ++ A+A+ F+ L F + I +NT+ I++ + + Sbjct: 122 PWAINKQSEMLAEAKANPRFAALAAGQFMS-AGGYVLFIDNI-KDNTINDIYVFQPEQQK 179 Query: 181 TQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+SG + Q + L + + +P + D I F +Y + + Sbjct: 180 KNKPSVVVAKSGELQGLPNGDQMLNLTNSTRYEGTPQTADFRISHFDNYNAYLGYQDVDS 239 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + LL+ E ++E RL L + L+++ Sbjct: 240 DEKLVQRADFQKLLS----------ETSPEAQAELQWRLALILSVPLMALLAVP--MSSV 287 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 RQ + + L S ++ + + L+ Sbjct: 288 NPRQGRFAKLLPALLLYLIYFLLQSSLKSAGASGKLNVSLLMPMVSVAFLVLGTLL 343 >gi|149378264|ref|ZP_01895976.1| predicted Permease [Marinobacter algicola DG893] gi|149357461|gb|EDM45971.1| predicted Permease [Marinobacter algicola DG893] Length = 352 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 61/361 (16%), Positives = 137/361 (37%), Gaps = 31/361 (8%) Query: 16 FLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTN 75 L ++ + + ++ + ++ + ++L +I Y P L ++ P F + Sbjct: 1 MLAVSGILLLVFMSGRFIKYLADAAAGELAGDVLFQIMAYRFPGFLELILPLGFFIGILL 60 Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAK 135 M +E+ ++ G S L+ L +I + + + + P ++ + + Sbjct: 61 AYGRMYLESEMTVLFACGVSDKQLLMKTLLGSIPVMLVVGAMSLYVSPWGMKKVEGIFNE 120 Query: 136 AQLALTFSYLEENLFFRLDDD-LYIKISKYNPN-NTLQGIFIVD-SRDTQTHKIYYAQSG 192 + A F L F L + + L+G+FI + S D + I A+ G Sbjct: 121 QRQATEFEMLAPGRFQSLSSGERVTYTEALSEDKRRLEGVFIAEHSEDGKGLTIITAREG 180 Query: 193 SIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLS 248 S +D + ++L DG P + F++Y L+ S ++ L+ + Sbjct: 181 SQFIDEETGSRFLVLEDGARFEGLPGQLAYDVTGFEAYGLKIRSGSAGEKELEEGLATSA 240 Query: 249 FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPI 308 + + +P +R+ H R T L I L+++ R RQ + H + Sbjct: 241 LMASDDPE-----------HRAMLHWRFTLPLIVPIVTLLAV--RLSRVNPRQGRFFHLL 287 Query: 309 FISLSISFGVFWGFSYIIHKI---EQNPYYIPILYLF-LFCISSIFL-----LMIKKKYT 359 L + + G + + P +I +L++ LF + ++L + +++ Sbjct: 288 PAMLV--YITYLGLLIVARDALEGGKVPEWIGLLWVHGLFLVLGLWLQFGPAWLYRRRLL 345 Query: 360 K 360 + Sbjct: 346 R 346 >gi|254427836|ref|ZP_05041543.1| putative permease, YjgP/YjgQ family [Alcanivorax sp. DG881] gi|196194005|gb|EDX88964.1| putative permease, YjgP/YjgQ family [Alcanivorax sp. DG881] Length = 372 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 57/364 (15%), Positives = 137/364 (37%), Gaps = 24/364 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 YI R + + ++ +V + + ++ + ++ + + L + + +P L Sbjct: 6 ILHRYINRQVFMTTVLVTFILVMVLVSGRFIKYLAEAAAGEIAADALFLVMAFRMPEFLQ 65 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M+ P + VL M+ + E++++ G +++ ++ ++ + + + + Sbjct: 66 MIVPLSLYIALLLVLGRMHMDNEMVVLQAGGQGNGRVVRSLVVPILMATTLVGMFSLYVT 125 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFF---RLDDDLYIKISKYN-PNNTLQGIFIVDS 178 P+ + + ++ + + L F D N L+ +F+ D+ Sbjct: 126 PRGDAEVNRIFEEQKDRSVLELLTPGRFHVKGSSDSQRATYAEHLNREKGVLENVFVADA 185 Query: 179 R-----DTQTHKIYYAQSGSIDLDR--QAIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 R + +A+SG + ++ ++L DG ++ P D + FK ++ Sbjct: 186 RFESQGEAGRLLTVWAKSGKLVVEEGISYLLLTDGFQYQGKPGQLDYKEVGFKEARVRIG 245 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 + + K ++ L++ +N + +E RL+ L I L +I Sbjct: 246 GEKTDSRPPKVRGRSTQELVDQRADN--------KAALAELQWRLSLILTVPIMALAAIP 297 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSY---IIHKIEQNPYYIPILYLFLFCISS 348 A R RQ + I L V I P+Y+ ++++ L + Sbjct: 298 LA--RVNPRQGRFYRLIPAVLGYMLYVGMLLVCRSAIEDHKGSLPWYLSMVWIHLSAGAV 355 Query: 349 IFLL 352 +FLL Sbjct: 356 VFLL 359 >gi|260655096|ref|ZP_05860584.1| putative membrane protein [Jonquetella anthropi E3_33 E1] gi|260630207|gb|EEX48401.1| putative membrane protein [Jonquetella anthropi E3_33 E1] Length = 339 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 53/332 (15%), Positives = 123/332 (37%), Gaps = 11/332 (3%) Query: 32 ILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDN 91 + + +L+ SL + ++ Y +P V+ + P + +M+ N+E++ + Sbjct: 13 LFKLADLIIERGVSLAVAGRLFVYELPGVVVLTLPMSCLLGALLGFGAMSTNSEVVALKA 72 Query: 92 TGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFF 151 +G S + PV+F A+++SI I + P + + + +++ +F Sbjct: 73 SGISFWRMNWPVIFWAVIISILSLILNETLVPLGQRAAENVMTFEVAKQKPVLIKQEVFL 132 Query: 152 RLDDDLYIKISKYNP-NNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHR 210 + + + K +P + ++ + + + + +I A +G L DG+V+ Sbjct: 133 QAPGGRVVYVGKLDPSSGSMSNVIVQELASGKLTRITVAPNGQWVSG--IWYLTDGDVYE 190 Query: 211 KSPISKDISIMKF--KSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETY 268 + F + + + +K +D + S L + + + Sbjct: 191 MKEPDGVAHLFHFAKQELPISLTPRQIANTSVKPDDLSASDLYRYIAAMKM-QGKDISAL 249 Query: 269 RSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHK 328 +FH +L VI LI + R + S+ I F + S Sbjct: 250 WVKFHFKLAVPWACVILSLIGTSLGV--SHQRHGNRSVGFGQSILIVFLYYVLMSVGKSL 307 Query: 329 IEQN---PYYIPILYLFLFCISSIFLLMIKKK 357 + N P L +F ++++FL+ + Sbjct: 308 GQTNALPPVVAGWLPNIIFLVAAVFLIRRADR 339 >gi|330448737|ref|ZP_08312384.1| putative transmembrane possibly involved in transport conserved inner membrane protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492928|dbj|GAA06881.1| putative transmembrane possibly involved in transport conserved inner membrane protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 366 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 55/357 (15%), Positives = 125/357 (35%), Gaps = 21/357 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R +S + + + + ++ + S + ++++ + G IP++ Sbjct: 2 IIVRYLTRETLKSQIAVLFVLFLVFISQKFIRILADASDGSIPSDLIMTLMGLSIPSMAL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG L++ L LAI+ ++ + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGMGNKLLLQSALALAIITGSIAAVNALWLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNNT-LQGIFIVDSRD 180 P + ++Q+ KA+ + L + F + D + + + L +FI + Sbjct: 122 PWSQDHVEQVMEKAKAGPGLNMLVKGTFQQTPDGKGVVFVDDITEKGSKLSKVFIAQLKA 181 Query: 181 TQT--HKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 T+T + A G I RQ + LNDG + P + SI F +Y Sbjct: 182 TETLQPSVMVADRGLITEQPDGRQMLELNDGTRYEGIPTQLNYSITHFNNYQALIGQREV 241 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 L+ E ++E R + + + L+ ++ Sbjct: 242 KQGNRDWEALPTLDLM----------KESNLAAKAELQWRFSL-ILCI--PLLVMIVVPL 288 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFL 351 A+ ++ + + ++ I F S IE I ++ + L Sbjct: 289 SAVNPRQGRFAKLAPAVLIYLAYFLAISSAKSAIEDGIIPSGIGMWPINIATLLVAL 345 >gi|167032002|ref|YP_001667233.1| permease YjgP/YjgQ family protein [Pseudomonas putida GB-1] gi|166858490|gb|ABY96897.1| permease YjgP/YjgQ family protein [Pseudomonas putida GB-1] Length = 371 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 49/318 (15%), Positives = 116/318 (36%), Gaps = 23/318 (7%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ R + + ++ I + ++ + + +L I G+ +P L ++ Sbjct: 5 RYLSREVLVTLSAVSAVLLVIIMSGRFIKYLAQAAQGVLDPGVLFLIMGFRLPGFLQLIL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + + +E+ ++ TG S+ L+ + A L+++ + + P Sbjct: 65 PLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLLGLTMAPAALVALLVAWLSLSLAPLG 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNT-LQGIFIVDSR---- 179 + ++Q+ ++ F L F L D + + + L G+FI + R Sbjct: 125 VAQVQQIISQQDALTEFDTLVPGRFQTLRDGSRVTYTEQLSDDRINLAGVFISEKRFNQD 184 Query: 180 --DTQTHKIYYAQSGS--IDLDRQ-AIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + + A+ G I D ++L +G + +P D +K+ +Y + Sbjct: 185 KTKDRAPSVLVAEKGHQEIQADGNRYLVLENGYRYDGNPGQADYRAIKYDTYGVLLPKPE 244 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + V + S L+ + R+E R++ + + L+++ Sbjct: 245 VAEEVTEREAIPTSELI----------GKKGLRERAELQWRISLPILVFVVTLLAVP--L 292 Query: 295 KRALVRQRKKIHPIFISL 312 R RQ + + + L Sbjct: 293 SRVNPRQGRFLKLLPAIL 310 >gi|75907859|ref|YP_322155.1| permease YjgP/YjgQ [Anabaena variabilis ATCC 29413] gi|75701584|gb|ABA21260.1| permease YjgP/YjgQ [Anabaena variabilis ATCC 29413] Length = 391 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 51/374 (13%), Positives = 135/374 (36%), Gaps = 24/374 (6%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + Y+ + +FL I + + + + V S ++I +++ +P Sbjct: 19 TIMDRYLTSELLPTFLFGVGAFSSIGVTIDAVFELVRRVVESGLPVSIAVQVFLLKLPNF 78 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + T + ++ +EL+ + G S ++ + L+ +++ F+ Sbjct: 79 IVLAFPMSTLLATLMTYSRLSSESELIALRGCGVSVYRMVMTAVMLSFVVTGLTFLFNEQ 138 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-------------YIKISKYNPN 167 I P KA + ++N+F+ D+ +++ Sbjct: 139 IAPAANYQATLTLDKALKSDKPKLKQQNIFYPEYRDIQEKDGTKNRILTRLFYADQFD-G 197 Query: 168 NTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 ++G+ I+D ++I A+S + + +G ++ +P +I++F+ Sbjct: 198 KQMKGLTIIDRSTDGLNQIVVAESAEWNGAQSIWDFYNGTIYLVAPDRSYRNILRFEKQQ 257 Query: 228 LQTESANSS--TIVLKANDQNLSFLLNP-NPNNPNYRPELLETYRSEFHKRLTQWLFPVI 284 L+ S + N++ L+ N + + ++ V+ Sbjct: 258 LKLPRTPLSLAEQSRDYGEMNIAQALDQLNIERLGGDRQKIRKLEVRIQQKFALPFVCVV 317 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLF 342 F +V A + ++ K IS+ + F + +I + Q + P + +L Sbjct: 318 F---GLVGAAMGTIPQRTGKGTSFGISVIVIFSYYLLG-FITGALGQAGVFSPFIGAWLP 373 Query: 343 LFCISSIFLLMIKK 356 F + + ++ + Sbjct: 374 NFIGLGVGIFLLVR 387 >gi|194336947|ref|YP_002018741.1| permease YjgP/YjgQ family protein [Pelodictyon phaeoclathratiforme BU-1] gi|194309424|gb|ACF44124.1| permease YjgP/YjgQ family protein [Pelodictyon phaeoclathratiforme BU-1] Length = 441 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 51/234 (21%), Positives = 98/234 (41%), Gaps = 6/234 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL+ SFL + + I+F+ + + ++++ + Sbjct: 1 MKIIDRYILKAHVGSFLFAFVTIIFVLILQFFATFADRFMGKGIGFTAMVELILLQSAWM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + S+ +E+ + +G S L+ PVL +LLS+F+ N+ Sbjct: 61 VGLAAPMAVLVSVVMAFGSLTTTSEMTVFRASGISLYRLMMPVLLAGLLLSLFVERFNNV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSR 179 + P+ K L + L EN F L D I + + + L+GI I D+ Sbjct: 121 VLPEANYYAKSLMVDIARSKPAFGLAENAFSTLVDGYSIFVRSTDEHSKELRGIVIYDAS 180 Query: 180 DTQTHKIYYAQSGSID--LDRQAIILN--DGEVHR-KSPISKDISIMKFKSYTL 228 + + A+ G+ID D +++ +GE+H+ + P K M F+ + Sbjct: 181 RSDYKTMVTAEKGTIDFSGDDHYLVMTLFNGEIHQVRQPDHKSYRNMSFQKHRF 234 Score = 39.2 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 35/93 (37%), Gaps = 4/93 (4%) Query: 251 LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFI 310 L+ N + Y + +HK+ L +F L+ A L R+ I Sbjct: 328 LDGELKNIEANRNMYNRYMAAYHKKYALSLACFVFVLVG---APLGVLARRGGFGVGAAI 384 Query: 311 SLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 SL F ++W KI + P++ ++L Sbjct: 385 SL-FLFVLYWMLMISGEKIAERGILDPMISMWL 416 >gi|85060086|ref|YP_455788.1| putative transport protein [Sodalis glossinidius str. 'morsitans'] gi|84780606|dbj|BAE75383.1| putative transport protein [Sodalis glossinidius str. 'morsitans'] Length = 366 Score = 146 bits (368), Expect = 7e-33, Method: Composition-based stats. Identities = 55/368 (14%), Positives = 137/368 (37%), Gaps = 27/368 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IITRYLVRETFKSQLAILFILLLIFFCQKLVRILGAAVDGDIPTNLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P M L+ M +E+ ++ G + LI+ L L+++ +I ++ + Sbjct: 62 LILPLSLFMGLLMTLSRMYTESEITVMHACGLGKSILIRAALLLSLITAILAVVNVVWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + ++A+ + + L E F ++ + + + +F+ + Sbjct: 122 PWSSRHQDLVMSEAKANPSMAALVEGQFKPAENGNSVLFVGNVKDKGFEHVFLAQLKPNG 181 Query: 183 T--HKIYYAQSGSI--DLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A G + D +++ D G + + + +D I F Y + Sbjct: 182 NARPSVVIADRGHMSQRPDGSQLVMLDKGTRYEGTALLRDFRITDFTQYQAVIGRRAVAV 241 Query: 238 IVLKANDQNLSFLLN-PNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 A +L L P P R+E H R T + +I ++ + Sbjct: 242 DGTDAEQMSLRQLWRSPEPE-----------ARAELHWRFTLVVSVLIMAMMVVP--LSV 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFLFCISSIFLLM 353 RQ + +S+ + ++ F + + N P+L+++L ++ + L + Sbjct: 289 VNPRQGR-----VLSMLPAMLLYLIFFLLQTSLRSNGAKGKLDPMLWMWLTNVAYLALAL 343 Query: 354 IKKKYTKI 361 + + + Sbjct: 344 VLNLWDSV 351 >gi|150021419|ref|YP_001306773.1| permease YjgP/YjgQ family protein [Thermosipho melanesiensis BI429] gi|149793940|gb|ABR31388.1| permease YjgP/YjgQ family protein [Thermosipho melanesiensis BI429] Length = 1096 Score = 146 bits (368), Expect = 7e-33, Method: Composition-based stats. Identities = 58/357 (16%), Positives = 121/357 (33%), Gaps = 7/357 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ YIL+ F+M V A V + Q +++ + L ++ Y +P Sbjct: 1 MRVLTKYILKLSIGPFIMGVAAFVLFASVELLYQLSDIIVRHRVGILKLFELIYYNLPYF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P VL+ + + E+ + G L+ P L++L +F F + Sbjct: 61 VSMGIPVGVLFSIFWVLSQLYSSKEITAMLVHGIPSRKLVYPFFLLSVLFGLFAFYLNDQ 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSR 179 + P + +K + EN+ ++D+ Y + +Y+ + L + + Sbjct: 121 MVPTFNHKAMKTISKYVYKRPEISIRENVLTKIDESQYFFVKRYDQSSGILYDVVLFQHI 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS--T 237 +I A+ + D L +G+++ + F +L + S Sbjct: 181 Q-GEERIITAEK--VQKDEGKWFLINGKMYVTDKDGFLKFDVNFSKISLDLKDDLESLMR 237 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + D L N + E H R + P I ++ + + Sbjct: 238 VGKSPRDMTGDELKN-KIKTFRKLGVDPSPWIVELHGRYANSVGPFIITILGVPLSLLFG 296 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 L + + F + + G S + + NP +F +FL ++ Sbjct: 297 LKSKSWSVIFTFAIVILYQGSGAWISAMGKENLLNPVLAAWFPNLVFISVGLFLFLM 353 >gi|325136763|gb|EGC59363.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M0579] gi|325208502|gb|ADZ03954.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis NZ-05/33] Length = 396 Score = 145 bits (367), Expect = 7e-33, Method: Composition-based stats. Identities = 45/365 (12%), Positives = 144/365 (39%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ +++ + + + + ++ + Q + + + +++ +L + G+ + + P Sbjct: 27 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTP 86 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ ++ + + + + Sbjct: 87 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWVI 146 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLD--DDLYIKISKYN-PNNTLQGIFIVDSR 179 P ++ + + S +E F L + + ++ + ++ +F+ + Sbjct: 147 PWAELRSREYAEILKQKQELSLVEAGGFNSLGKRNGRVYFVETFDTESGIMKNLFLREQD 206 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE-SANSS 236 I +A+ G S++ +++ + L G + +P D + + F+ L + Sbjct: 207 KNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTTPKLI 266 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + L+ +NP ++ +E R++ + L+ ++A Sbjct: 267 DPVSHRRTIPTAQLIG--SSNPQHQ--------AELMWRISLTV---SVLLLCLLAVPLS 313 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP--YYIPILYLFLFCISSIFLLMI 354 + + I I++ + G + + +E +++ +L + + +L+ Sbjct: 314 YFNPRSGHTYNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFVIAIVLLR 373 Query: 355 KKKYT 359 + Sbjct: 374 VRSMP 378 >gi|292486865|ref|YP_003529735.1| inner membrane protein YjgP [Erwinia amylovora CFBP1430] gi|292900738|ref|YP_003540107.1| permease [Erwinia amylovora ATCC 49946] gi|291200586|emb|CBJ47717.1| putative permease [Erwinia amylovora ATCC 49946] gi|291552282|emb|CBA19319.1| Inner membrane protein yjgP [Erwinia amylovora CFBP1430] Length = 366 Score = 145 bits (367), Expect = 7e-33, Method: Composition-based stats. Identities = 50/336 (14%), Positives = 121/336 (36%), Gaps = 22/336 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGEIPTNLVLTLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G + L+K + L + ++ ++ + Sbjct: 62 LILPLSLFLAILMTLGRLYTESEITVMHACGLGKSVLVKAAMILMLFTALLAALNVGWLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+ + L F + D + + NT + +F+ R Sbjct: 122 PWSARYQNEVMQNAKANPGAAALAAGQFQQSADGQSVLFIENVKGNTFRNVFLAQLRPKG 181 Query: 183 T--HKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G + Q + L+ G + + +D I FK+Y + Sbjct: 182 NARPSVVVAEQGRMEQRVDGSQIVTLDSGTRFEGTALLRDFRITDFKNYQAIIGHQAVTL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + +L L + + + +RSE H RLT +I L+ + Sbjct: 242 DPNDSEQMSLDTLWHSDKPD----------FRSELHWRLTLVFSVLIMALMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP 333 RQ + +S+ + ++ F + + + Sbjct: 290 NPRQGR-----VLSMLPAMLLYLVFFLLQSSLRSSG 320 >gi|330873094|gb|EGH07243.1| hypothetical protein PSYMP_02391 [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 375 Score = 145 bits (367), Expect = 7e-33, Method: Composition-based stats. Identities = 60/359 (16%), Positives = 131/359 (36%), Gaps = 31/359 (8%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ R + + ++ + ++ + +S +L I G+ +P L ++ Sbjct: 5 RYLSREVLLTLSAVSAVLLVFIMSGRFIKYLAQAASGALDPGVLFLIMGFRLPGFLQVIL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + + +E+ ++ TG S+ L+ + A+L+ + + + P+ Sbjct: 65 PLGLFLGILMAYGRLYLESEMTVLAATGMSQQRLLAITMGPAVLVGLLVAWLSFSLAPQG 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYNPNNT-LQGIFIV------D 177 + QL + F L F L D I + + + + L G+FI D Sbjct: 125 AAQFSQLINQQDAMTEFDTLVPGRFQALRDGTRITYTKELSEDRSQLAGVFISEKRMSND 184 Query: 178 SRDTQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + A+ G ++ +IL +G + +P + D ++K+ +Y Sbjct: 185 KSKDNGITVLVAEKGHQEVQPNGSRFLILENGYRYDGNPGAADYRVVKYDTYGAALPKPE 244 Query: 235 SSTIVLKANDQNLSFLL-NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 S + S L NP P + +E R++ L I L++I Sbjct: 245 ISEEITDREAIPTSELFGNPAPRS-----------VAELQWRISLPLSVFIVTLMAIP-- 291 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFL 351 R RQ + + L + ++ + I+ + + + L L ++ + I+L Sbjct: 292 LSRVNPRQGRYLK-----LLPAILLYMSYLAILISVRSSLEKGKLPLSLGMWWVHGIYL 345 >gi|187734829|ref|YP_001876941.1| permease YjgP/YjgQ family protein [Akkermansia muciniphila ATCC BAA-835] gi|187424881|gb|ACD04160.1| permease YjgP/YjgQ family protein [Akkermansia muciniphila ATCC BAA-835] Length = 363 Score = 145 bits (367), Expect = 7e-33, Method: Composition-based stats. Identities = 66/365 (18%), Positives = 132/365 (36%), Gaps = 15/365 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRIN-LVSSSTESLNILLKISGYLIPT 59 MK + YI R + + + + + + + + + L+ + ++I+L+ +IP Sbjct: 1 MKILDRYIARQLLGVTALGVMALSALLLLGNLFKELRPLLVENKAPISIVLEFIFQVIPF 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 L P+ F V + + EL + +G S L P + + I LS + Sbjct: 61 SLMFSIPWGFLTAVLLVYGRLASDNELTSMRMSGMSLWRLSAPAIAIGIALSGLCYWINI 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 I P+ + +I +L KA L E D+L I I K + + G+ I Sbjct: 121 DIAPRAKQSISELLIKAASINPKGLLNEGQAITKFDNLEIYIDKRVDD-VIHGMHIYQKA 179 Query: 180 DTQTHKIYY-AQSGSIDLDRQAIILNDGEVHRKSP-----ISKDISI-MKFKSYTLQTES 232 D ++ + ++ ++D + IL +H +P IS + L Sbjct: 180 DDKSPSVAMHSERVTMDFSPEKKIL---TLHLINPLITTQEEGSISQSVTMDEMPLSINL 236 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 S + +KAN + + + +E +R + L ++F LI + Sbjct: 237 DKSRSRRIKANRFTNREIREALDTPGYLDKKQTTEFATELPRRASFSLACIVFALIGVPL 296 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 A R++ + + I+ F + + + IL I+ L Sbjct: 297 AI---NTRRKDTSTGFALGILIASLYFLALIFADLSRKNDTMLPYILLWLPNIITVAVAL 353 Query: 353 MIKKK 357 + K+ Sbjct: 354 HLHKR 358 >gi|17231561|ref|NP_488109.1| hypothetical protein alr4069 [Nostoc sp. PCC 7120] gi|17133204|dbj|BAB75768.1| alr4069 [Nostoc sp. PCC 7120] Length = 371 Score = 145 bits (367), Expect = 7e-33, Method: Composition-based stats. Identities = 51/371 (13%), Positives = 137/371 (36%), Gaps = 24/371 (6%) Query: 5 ELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + Y+ + +FL I + + + + V S ++I +++ +P + + Sbjct: 2 DRYLTSELLPTFLFGVGAFSSIGVTIDAVFELVRRVVESGLPVSIAVQVFLLKLPNFIVL 61 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + T + ++ +EL+ + G S ++ + L+ +++ F+ I P Sbjct: 62 AFPMSTLLATLMTYSRLSSESELIALRGCGVSVYRMVMTAVMLSFVVTGLTFLFNEQIAP 121 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-------------YIKISKYNPNNTL 170 KA + ++ ++N+F+ D+ +++ + Sbjct: 122 AANYQATLTLDKALKSDKPTFKQQNIFYPEYRDIQEKDGTKNRILTRLFYADQFD-GKRM 180 Query: 171 QGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT 230 +G+ I+D ++I A+S + + +G ++ +P +I++F+ L+ Sbjct: 181 KGLTIIDRSTDGLNQIVVAESAEWNGAQSIWDFYNGTIYLVAPDRSYRNILRFEKQQLKL 240 Query: 231 ESANSS--TIVLKANDQNLSFLLNP-NPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGL 287 S + N++ L+ N + + ++ V+F Sbjct: 241 PRTPLSLAEQSRDYGEMNIAQALDQLNIERLGGDRQKIRKLEVRIQQKFALPFVCVVF-- 298 Query: 288 ISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFC 345 +V A + ++ K IS+ + F + +I + Q + P + +L F Sbjct: 299 -GLVGAAMGTIPQRTGKGTSFGISVIVIFSYYLLG-FITGALGQAGIFSPFIGAWLPNFI 356 Query: 346 ISSIFLLMIKK 356 + + ++ + Sbjct: 357 GLGVGIFLLVR 367 >gi|56751017|ref|YP_171718.1| hypothetical protein syc1008_d [Synechococcus elongatus PCC 6301] gi|81299323|ref|YP_399531.1| hypothetical protein Synpcc7942_0512 [Synechococcus elongatus PCC 7942] gi|56685976|dbj|BAD79198.1| hypothetical protein YCF84 [Synechococcus elongatus PCC 6301] gi|81168204|gb|ABB56544.1| conserved hypothetical protein YCF84 [Synechococcus elongatus PCC 7942] Length = 394 Score = 145 bits (367), Expect = 8e-33, Method: Composition-based stats. Identities = 54/372 (14%), Positives = 124/372 (33%), Gaps = 16/372 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPT 59 + + YILR + FL + + + + + V+ + L++ ++ +P Sbjct: 27 ISIMDRYILREMLGPFLFGVGAFTSVGLSIGVVFELVRQVTEAGLPLSVAAQVFLLKMPD 86 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 L + P + ++ ++EL+ + + G S I P + ++I+++ F Sbjct: 87 FLVLAFPMSMLLSALMAYNRLSSDSELIALRSCGISSYRFILPGILMSIVVTGMTFAFYE 146 Query: 120 IIEPKCRSTIK-QLSAKAQLALTFSYLEENLFFRLDDDLY-----IKISKYNPNNTLQGI 173 + P + L + N+ ++ D I ++ ++G+ Sbjct: 147 SVVPAANFQAQVTLQTALNQTRPQLEEKNNIVYQQFDRKTSELARIFYARRYDGEQMRGL 206 Query: 174 FIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 I+D + +I A++G Q +G ++ +P I FKS Sbjct: 207 TILDFTRGELSQIISAETGVWHPGDQLWEFRNGTIYGVAPDGSYSGIATFKSQEFTIPET 266 Query: 234 NSSTIVLKANDQNL-----SFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 S ++ + L N + + ++L V FGLI Sbjct: 267 PLSIASQSRDETQMNATQIWQYLRVLRQTNNTAD--IRKWEVRLQQKLALPFVCVAFGLI 324 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 A+ A ++ + IS+ I F + + F + + Sbjct: 325 G--ASLGTAPNQRTGRATGFGISVLIIFSYYLLAFVTGALGINGTLPTLLAGWFPWLLGM 382 Query: 349 IFLLMIKKKYTK 360 L + ++ + Sbjct: 383 GVGLYLLRQTAR 394 >gi|307154796|ref|YP_003890180.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 7822] gi|306985024|gb|ADN16905.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 7822] Length = 388 Score = 145 bits (367), Expect = 8e-33, Method: Composition-based stats. Identities = 58/368 (15%), Positives = 131/368 (35%), Gaps = 22/368 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 S + Y+ + FL + + + + V+ S S++I L+I +P + Sbjct: 18 SVDSYVFMELFIPFLFGMGLFTSLGIAIGTLFDIVRKVTESGLSISIALQILMLKMPEFV 77 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + T + + ++EL+ + G S L+ P L L+++++ F + + Sbjct: 78 VLAFPMSILLATLMGYSRLASDSELIAFRSIGISPYRLLVPSLILSLMVTGTTFFFSDYV 137 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLY-------------IKISKYNPNN 168 P+ K + A A +E+N+ + + K++ Sbjct: 138 APQATQQAKSILADALKQDKPLQVEDNIIYPEYKKITQDNGRDQTILTRLFYAEKFD-GQ 196 Query: 169 TLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 +QG+ I+D ++I +QS ++D+ + +G ++ +P +I++F+ L Sbjct: 197 QMQGLTILDRSQPGVNQIVTSQSAIWNVDQNSWDFYNGTIYLIAPDGSYRNIVRFEHQQL 256 Query: 229 QTESANSSTIVLK--ANDQNLSFLLNPNPNNPNYR-PELLETYRSEFHKRLTQWLFPVIF 285 A K D +++ + + ++ ++F Sbjct: 257 DLPRAPLDIAKRKQNPADMSIAEAKEYLKIVKLSKNDQRARKVEVRIQEKYALPFVCIVF 316 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC 345 GLI K Q F + ++ S+I + P + +L Sbjct: 317 GLIGSAIGLKP----QNTNKATSFGVCIVLIFSYYLLSFITSSMGIWGIVTPTVSAWLPN 372 Query: 346 ISSIFLLM 353 I + M Sbjct: 373 ILGLLAAM 380 >gi|116690487|ref|YP_836110.1| permease YjgP/YjgQ family protein [Burkholderia cenocepacia HI2424] gi|170733808|ref|YP_001765755.1| permease YjgP/YjgQ family protein [Burkholderia cenocepacia MC0-3] gi|116648576|gb|ABK09217.1| permease YjgP/YjgQ family protein [Burkholderia cenocepacia HI2424] gi|169817050|gb|ACA91633.1| permease YjgP/YjgQ family protein [Burkholderia cenocepacia MC0-3] Length = 364 Score = 145 bits (367), Expect = 8e-33, Method: Composition-based stats. Identities = 60/366 (16%), Positives = 139/366 (37%), Gaps = 24/366 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ I +++ + +S +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTIMLTTMMIRIVGYAASGEIDPRDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT R++E+++ +G S LIKP+ A + + + + Sbjct: 62 VMLVVTLFVSILFVLTRWYRDSEMVVWLASGVSLTRLIKPIGVFATPIILLITFFAFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNT-LQGIFIVDSRD 180 P K + A+ Q S L F + I K +P+ + +Q +F+ + + Sbjct: 122 PWSNQQSKMIRARFQQRDEISLLAPGQFRESAANHRVFFIEKMSPDQSKVQNVFVTSTEN 181 Query: 181 TQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + +Q+G + + ++L DG + +P + IM+F+ Y ++ S + Sbjct: 182 GKV-NVVVSQTGHTETSKDGDRFVVLEDGRRYDGTPGQPNFKIMEFERYGVKITSKPVTN 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + L NP +N +EF R L + ++ I Sbjct: 241 VQTTNSTPTPDLLRNPTRDNL-----------AEFAWRAGLPLIAINLMVLGIP--LSYQ 287 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN----PYYIPILYLFLFCISSIFLLM 353 R+ + I+ + +++ I + + +IEQ + L++ + I + + Sbjct: 288 NPRRSRTIN-LVMAVLIYLTYSNLLNVVQAQIEQGKMSFGVGLVGLHVVVAAIVAFIFWL 346 Query: 354 IKKKYT 359 + Sbjct: 347 RVRNRP 352 >gi|330994316|ref|ZP_08318244.1| putative permease [Gluconacetobacter sp. SXCC-1] gi|329758783|gb|EGG75299.1| putative permease [Gluconacetobacter sp. SXCC-1] Length = 410 Score = 145 bits (367), Expect = 8e-33, Method: Composition-based stats. Identities = 67/367 (18%), Positives = 134/367 (36%), Gaps = 17/367 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + Y+LR + F ++ ++ + ++L NL++++ S+ + LIP L Sbjct: 17 TTMDRYLLRQVVPPFSIALGVVMAALLLERLLVLFNLLAANGSSMKTFFALLSDLIPHYL 76 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + +V+ M+ N E+ + +G S + +P + + F I Sbjct: 77 GLALPAAMCVSVFSVIRRMSANHEIDALMASGVSIFRICQPFVLTGAIFGFLAFSLYGFI 136 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSRD 180 +P R + A A +L+ +F L DD+ + + + + +FI D D Sbjct: 137 QPYARYDYRSAFYFASHAGWTPHLQSKMFA-LSDDIVLTAENVDHAGSRMWNVFIRDGTD 195 Query: 181 TQTHKIYYAQSGSI----DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS- 235 + AQ G + D + L DG V S +I F T + Sbjct: 196 KAHVRFISAQKGYLFNPADGSNIRLDLVDGTVITDSQDKP-PTITSFSRTTRMISTKGKL 254 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELL---ETYRSEFHKRLTQWLFPVIFGLISIVA 292 T + + L P +E + RL + +++ Sbjct: 255 DTEAYRKRGETERELTVPELYYGIRYGNPTISHSYMIAELNFRLARTAAIPFIPILACAL 314 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIF 350 A VR+R+K +P +I+ F + N + P+L +L S I Sbjct: 315 AG----VRKRQKNNPGLAIAAITLVGFDHTLQMGMSFVANMHMSPLLVIWLPTLVFSLIC 370 Query: 351 LLMIKKK 357 + ++ ++ Sbjct: 371 VGVLIRQ 377 >gi|119511693|ref|ZP_01630798.1| hypothetical protein N9414_06074 [Nodularia spumigena CCY9414] gi|119463678|gb|EAW44610.1| hypothetical protein N9414_06074 [Nodularia spumigena CCY9414] Length = 371 Score = 145 bits (367), Expect = 8e-33, Method: Composition-based stats. Identities = 48/356 (13%), Positives = 129/356 (36%), Gaps = 22/356 (6%) Query: 5 ELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + Y + + FL + + + + + + S ++I +++ P + + Sbjct: 2 DRYFTKELVAPFLFGVGAFSSLGVTIDAVFELVRKIVESGLPISIAIQVFLLKFPNFIVL 61 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + T + ++ +EL+ + G S ++ + L+++++ FI I P Sbjct: 62 AFPMSTLLATLMTYSRLSGESELIAMRGCGVSVYRMVLTAVMLSLVVTGITFIFNEQIAP 121 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-------------YIKISKYNPNNTL 170 KA + ++ + N+F+ D+ +++ + Sbjct: 122 AANYQATVTLEKALKSDRPTFQQSNIFYPEYRDVEQPDGSRNRILARLFYADQFD-GKQM 180 Query: 171 QGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT 230 +G+ I+D ++I ++S + +G V+ +P S +I++F+ LQ Sbjct: 181 KGLTIIDRTTEGLNQIVVSESAQWNASDNVWDFYNGTVYLVAPDSSYRNILRFEHQQLQL 240 Query: 231 ESANSS--TIVLKANDQNLSFLLNPNP-NNPNYRPELLETYRSEFHKRLTQWLFPVIFGL 287 + + + N+ L + + + ++ + V+FGL Sbjct: 241 PRTPLNLVERRRDSGEMNIRESLEQLEIQRIGGDRKEIRKLQVRIQQKFSLPFVCVVFGL 300 Query: 288 ISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 + + ++ + +S+ + F + F +I + Q P + +L Sbjct: 301 VGSAMGSRP---QRSGRGTSFGVSVIVIFTYYLIF-FISGAMGQAGVLSPFMGAWL 352 >gi|170079022|ref|YP_001735660.1| permease, YjgP/YjgQ family protein [Synechococcus sp. PCC 7002] gi|169886691|gb|ACB00405.1| permease, YjgP/YjgQ family protein [Synechococcus sp. PCC 7002] Length = 373 Score = 145 bits (367), Expect = 9e-33, Method: Composition-based stats. Identities = 58/353 (16%), Positives = 138/353 (39%), Gaps = 15/353 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPT 59 + + YI+ + +F + V + + V S ++ LK+ +P Sbjct: 8 LAVLDRYIIGELNLAFAFGLGLFSALGIAVGSLFDLLAQVRESRLLFDVALKVMALKMPE 67 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + P + T V + ++ ++E++ + + G S L+ P L +IL + F+ ++ Sbjct: 68 FIGFALPMAVLLATLIVYSRLSGDSEIIALRSLGISVYRLVLPALIFSILATAITFVFKD 127 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-----DLYIKISKYNPNNTLQGIF 174 + P + Q +A L + +E + + ++++ ++ + Sbjct: 128 QVIPLANAQATQTLEQAFLQKQAPFRDEKIIYPEYGEDNVLKRLFYAAEFD-GQQMKDLT 186 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE-SA 233 I+D + ++I A + DL R +G ++ ++++F + +Q Sbjct: 187 IIDRSNGSLNQIVTADAAGWDLARNQWNFQNGIIYFIDIDGSYRNVLRFDRHQIQLSNEL 246 Query: 234 NSSTIVLKANDQNLSFL---LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 + K D +L+ L + +P+ L R F ++++ FP I + + Sbjct: 247 RVDEELPKHEDMSLAQLQQYMQTVAADPDRDEAWLRKLRVRFQEKIS---FPFICLALGV 303 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 V A + K + + + FG ++ +++I + Y PIL +L Sbjct: 304 VGAAIGLRPQSAGKATGFGLCVGLIFGYYF-LAFMISSVGVAGYLHPILAAWL 355 >gi|240127075|ref|ZP_04739736.1| hypothetical protein NgonS_00198 [Neisseria gonorrhoeae SK-93-1035] gi|268685430|ref|ZP_06152292.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035] gi|268625714|gb|EEZ58114.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035] Length = 371 Score = 145 bits (367), Expect = 9e-33, Method: Composition-based stats. Identities = 46/365 (12%), Positives = 146/365 (40%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ +++ + + + + ++ + Q + ++ + +++ +L + G+ + + P Sbjct: 2 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLDRAADGRVAIDAVLALVGFWVIGMTP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ +I + + + + Sbjct: 62 LLLVLTAFISTLTVLTCYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAILIAVMQLWVI 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLD--DDLYIKISKYN-PNNTLQGIFIVDSR 179 P ++ + + S +E F L + + ++ + ++ +F+ + Sbjct: 122 PWAELRSREYAEILKQKQELSLVEAGEFNNLGKRNGRVYFVETFDTESGIMKNLFLREQD 181 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE-SANSS 236 I +A+ G S++ +++ + L G + +P D + + F+ L + Sbjct: 182 KNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTTPKLI 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + + L+ +NP ++ +E R++ + L+ ++A Sbjct: 242 DPVSHRRTISTAQLIG--SSNPQHQ--------AELMWRISLTV---SVLLLCLLAVPLS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP--YYIPILYLFLFCISSIFLLMI 354 + + I I++ + G + + +E +++ +L + + +L+ Sbjct: 289 YFNPRSGHTYNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFVIAIVLLR 348 Query: 355 KKKYT 359 + Sbjct: 349 VRSMP 353 >gi|255533443|ref|YP_003093815.1| permease YjgP/YjgQ family protein [Pedobacter heparinus DSM 2366] gi|255346427|gb|ACU05753.1| permease YjgP/YjgQ family protein [Pedobacter heparinus DSM 2366] Length = 480 Score = 145 bits (367), Expect = 9e-33, Method: Composition-based stats. Identities = 43/221 (19%), Positives = 91/221 (41%), Gaps = 4/221 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK L +++ R F ++ ++FI ++ + + ++ + ++L++ Y Sbjct: 1 MKKIHLLLVKAFIRPFFVTFFIVMFILLMLFLFKYVDDLIGKGFEWYVILELMYYASAAN 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + ++ N EL+ I + G S + P+L L I L+I F+ Sbjct: 61 VSMALPLSILLSSIMTFGTLGENYELVAIKSAGVSLQKAMMPLLVLIIFLAISSFLFSEY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVD-S 178 + PK L + ++E +F I++ K + L + I D + Sbjct: 121 MLPKANLKFGSLLWDIRNKKLSFLIKEGVFNNSIPGYSIRVDKKGSDGISLHNVMIYDHT 180 Query: 179 RDTQTHKIYYAQSGSIDLDRQAII--LNDGEVHRKSPISKD 217 + KI A+SG + + ++ L+DG + +S Sbjct: 181 SNNGIAKIIIAKSGKMSKNDDYLLLTLHDGVRYEESNGKSS 221 >gi|268594204|ref|ZP_06128371.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268595873|ref|ZP_06130040.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|293399673|ref|ZP_06643825.1| hypothetical protein NGNG_01868 [Neisseria gonorrhoeae F62] gi|268547593|gb|EEZ43011.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268549661|gb|EEZ44680.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|291609924|gb|EFF39047.1| hypothetical protein NGNG_01868 [Neisseria gonorrhoeae F62] Length = 384 Score = 145 bits (366), Expect = 9e-33, Method: Composition-based stats. Identities = 46/365 (12%), Positives = 145/365 (39%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ +++ + + + + ++ + Q + + + +++ +L + G+ + + P Sbjct: 15 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTP 74 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ +I + + + + Sbjct: 75 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAILIAVMQLWVI 134 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLD--DDLYIKISKYN-PNNTLQGIFIVDSR 179 P ++ + + S +E F L + + ++ + ++ +F+ + Sbjct: 135 PWAELRSREYAEILKQKQELSLVEAGEFNNLGKRNGRVYFVETFDTESGIMKNLFLREQD 194 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE-SANSS 236 I +A+ G S++ +++ + L G + +P D + + F+ L + Sbjct: 195 KNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTTPKLI 254 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + + L+ +NP ++ +E R++ + L+ ++A Sbjct: 255 DPVSHRRTISTAQLIG--SSNPQHQ--------AELMWRISLTV---SVLLLCLLAVPLS 301 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP--YYIPILYLFLFCISSIFLLMI 354 + + I I++ + G + + +E +++ +L + + +L+ Sbjct: 302 YFNPRSGHTYNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFVIAIVLLR 361 Query: 355 KKKYT 359 + Sbjct: 362 VRSMP 366 >gi|59801587|ref|YP_208299.1| hypothetical protein NGO1228 [Neisseria gonorrhoeae FA 1090] gi|194097861|ref|YP_002000906.1| hypothetical protein NGK_0281 [Neisseria gonorrhoeae NCCP11945] gi|239998342|ref|ZP_04718266.1| hypothetical protein Ngon3_02533 [Neisseria gonorrhoeae 35/02] gi|240014487|ref|ZP_04721400.1| hypothetical protein NgonD_07553 [Neisseria gonorrhoeae DGI18] gi|240016933|ref|ZP_04723473.1| hypothetical protein NgonFA_07151 [Neisseria gonorrhoeae FA6140] gi|240079727|ref|ZP_04724270.1| hypothetical protein NgonF_00199 [Neisseria gonorrhoeae FA19] gi|240117144|ref|ZP_04731206.1| hypothetical protein NgonPID_01570 [Neisseria gonorrhoeae PID1] gi|240121009|ref|ZP_04733971.1| hypothetical protein NgonPI_04421 [Neisseria gonorrhoeae PID24-1] gi|268602832|ref|ZP_06136999.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] gi|59718482|gb|AAW89887.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090] gi|193933151|gb|ACF28975.1| Conserved hypothetical protein [Neisseria gonorrhoeae NCCP11945] gi|268586963|gb|EEZ51639.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] gi|317163631|gb|ADV07172.1| hypothetical protein NGTW08_0198 [Neisseria gonorrhoeae TCDC-NG08107] Length = 371 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 46/365 (12%), Positives = 145/365 (39%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ +++ + + + + ++ + Q + + + +++ +L + G+ + + P Sbjct: 2 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ +I + + + + Sbjct: 62 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAILIAVMQLWVI 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLD--DDLYIKISKYN-PNNTLQGIFIVDSR 179 P ++ + + S +E F L + + ++ + ++ +F+ + Sbjct: 122 PWAELRSREYAEILKQKQELSLVEAGEFNNLGKRNGRVYFVETFDTESGIMKNLFLREQD 181 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE-SANSS 236 I +A+ G S++ +++ + L G + +P D + + F+ L + Sbjct: 182 KNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTTPKLI 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + + L+ +NP ++ +E R++ + L+ ++A Sbjct: 242 DPVSHRRTISTAQLIG--SSNPQHQ--------AELMWRISLTV---SVLLLCLLAVPLS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP--YYIPILYLFLFCISSIFLLMI 354 + + I I++ + G + + +E +++ +L + + +L+ Sbjct: 289 YFNPRSGHTYNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFVIAIVLLR 348 Query: 355 KKKYT 359 + Sbjct: 349 VRSMP 353 >gi|226940338|ref|YP_002795412.1| permease YjgP/YjgQ [Laribacter hongkongensis HLHK9] gi|226715265|gb|ACO74403.1| permease YjgP/YjgQ [Laribacter hongkongensis HLHK9] Length = 363 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 47/362 (12%), Positives = 121/362 (33%), Gaps = 18/362 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F ++R + ++ I V Q+++ + +S + ++ + + Sbjct: 2 IFYRSVIRELTAVAFAVFSVLLAIMVVTQVVKLFDKAASGALPADAIVALIAFSTLGYFG 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + + VLT + R+ E+ + +G S I+PVL A+ L++ + + Sbjct: 62 TLLSITLFISVIVVLTRIWRDHEMAVWLTSGLSPNRWIRPVLAFAVPLTLLIATVSLFLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN--NTLQGIFIVDSRD 180 P + + + S + +F D + + + +F+ + Sbjct: 122 PWAARKGSEYTDILRQQDEISAVAPGVFKESRDGSKVYFVENYSGEAGSATNLFVRSI-E 180 Query: 181 TQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + +A+ G + + + L DG + + D +++F+ Y ++ +T Sbjct: 181 NGKTSLVFAREGIVRTEPNGERYLYLTDGRRYEGEAGAADWKVVEFRKYKVKINQNIRTT 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + S L N + R+E R++ + +I L + Sbjct: 241 VDTRTKSVPSSMLWLANTPDA----------RAELAWRVSLPIASLILAL--LAIPLSYY 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 R + + + + +++L L + LLM+ ++ Sbjct: 289 NPRSGQTFNLLIAIFVYQLYYNLMGVVQSWISKGELSVWSMVWLHLTMLGLFVLLMVMRR 348 Query: 358 YT 359 Sbjct: 349 KP 350 >gi|254786690|ref|YP_003074119.1| permease, YjgP/YjgQ family [Teredinibacter turnerae T7901] gi|237683657|gb|ACR10921.1| permease, YjgP/YjgQ family [Teredinibacter turnerae T7901] Length = 378 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 57/377 (15%), Positives = 146/377 (38%), Gaps = 34/377 (9%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + S L ++ I + + + ++ +LL + Y +P L Sbjct: 2 IIFRYLAREVLSSMFAVSLVLLMIIISARFVNYLAEAAAGKLDAGVLLTLMAYRLPAYLE 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + ++E+ ++ G S+ L+ L ++++++ + + + Sbjct: 62 LILPLGLFIGILMAYGRLYLDSEMTVLSACGLSQKRLVGYTLAASLVVAMLVGLFSLYLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPN-NTLQGIFI----- 175 P+ + L A+ + F L+ + F LD + + L+G+F+ Sbjct: 122 PQGVKASEALLAEQRNRTDFETLKPSRFHTLDQGAGTSYAESISEDKKQLRGVFMAKVSP 181 Query: 176 ---VDSRDTQTH-----KIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKF 223 D D TH + A+SG +D Q+ ++L +G + +P +++ +++F Sbjct: 182 IDPADDLDKVTHQEADLTVLTAESGETVIDPQSGQKYLLLKNGRRYVGTPGTQNYQVVEF 241 Query: 224 KSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPV 283 +++ + + + D +F L + R + + + Sbjct: 242 GNFSQLLPEPDYAVKPKRFTDGLTTFKLLQAK---------TREASAALQWRFSMPVLVM 292 Query: 284 IFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP-ILYLF 342 I + ++A ++ + + ++ + + IE+ +P +L+L Sbjct: 293 I---VGLLAVPLSKTQPRQGRYAKMLPAIILYMVYLVCVNAARGLIEKGNEPVPGMLWLV 349 Query: 343 --LFCISSIFLLMIKKK 357 LF ++FLL+ K++ Sbjct: 350 HLLFFTVALFLLVDKRR 366 >gi|107023405|ref|YP_621732.1| permease YjgP/YjgQ [Burkholderia cenocepacia AU 1054] gi|105893594|gb|ABF76759.1| permease YjgP/YjgQ [Burkholderia cenocepacia AU 1054] Length = 364 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 60/366 (16%), Positives = 139/366 (37%), Gaps = 24/366 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ I +++ + +S +L + G + L Sbjct: 2 IFERSLQRELAYTASAVFMVLLTIMLTTMMIRIVGYAASGEIDPRDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT R++E+++ +G S LIKP+ A + + + + Sbjct: 62 VMLVVTLFVSILFVLTRWYRDSEMVVWLASGVSLTRLIKPIGVFATPIILLITFFAFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNT-LQGIFIVDSRD 180 P K + A+ Q S L F + I K +P+ + +Q +F+ + + Sbjct: 122 PWSNQQSKMIRARFQQRDEISLLAPGQFRESAANHRVFFIEKMSPDQSKVQNVFVTSTEN 181 Query: 181 TQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + +Q+G + + ++L DG + +P + IM+F+ Y ++ S + Sbjct: 182 GKV-NVVVSQTGHTETSKDGDRFVVLEDGRRYDGTPGQPNFKIMEFERYGVKITSKPVTN 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + L NP +N +EF R L + ++ I Sbjct: 241 VQTTNSTPTPDLLRNPTRDNL-----------AEFAWRAGLPLIAINLMVLGIP--LSYQ 287 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN----PYYIPILYLFLFCISSIFLLM 353 R+ + I+ + +++ I + + +IEQ + L++ + I + + Sbjct: 288 NPRRSRTIN-LVMAVLIYLTYSNLLNVVQAQIEQGKMSFGVGLVGLHVVVAAIVAFIFWL 346 Query: 354 IKKKYT 359 + Sbjct: 347 RVRNRP 352 >gi|301156462|emb|CBW15933.1| conserved inner membrane protein [Haemophilus parainfluenzae T3T1] Length = 363 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 43/356 (12%), Positives = 120/356 (33%), Gaps = 17/356 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + +S + ++ I + Q+++ + ++ +++ + G +PT+ Sbjct: 2 ILTRYLTKEVFKSQIAILFILLLIFFSQQLVRVLGSAANGKVPADLVFSLLGLGMPTMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P C + + +E+ ++ G + L++ L L++ + + + Sbjct: 62 LMLPLCLFIAILLTFGRLYAESEITVMRACGVGQRILVRVALILSLFTAGLAAYNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + A+ T L F ++ ++ N + +++ + Sbjct: 122 PWAIQKQAAIVEDAKANPTMGALASGQFMSTSNNNFVLFIDKINGNQISDVYLFQMKAKG 181 Query: 183 --THKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G + Q + L + + + D I F Y +++ Sbjct: 182 QTKPSVVTAEKGELKALPNGDQVLNLQNTLRVEGTSVLPDFRITHFDDYQAYLGHQETNS 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +A + + LL + ++E H R+T L + LI++ + Sbjct: 242 ESDEAAELSFEQLL----------KDKSAAAKAELHWRITLILAVPLMALIAVP--MSKV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 RQ + + L S+ ++ L + +++ Sbjct: 290 NPRQGRFAKILPALLLYLIYFLLQSSFKSAGGADKLDAGLLMPLVNIAFLILGIVL 345 >gi|307543948|ref|YP_003896427.1| permease [Halomonas elongata DSM 2581] gi|307215972|emb|CBV41242.1| K07091 [Halomonas elongata DSM 2581] Length = 361 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 56/368 (15%), Positives = 134/368 (36%), Gaps = 22/368 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R I ++ ++ + + ++ + + ++IL + + +P L Sbjct: 2 IIFRYLTREILQTMAAVAGVLLLVIMGSRFIRYFSNAAEGEIPVDILGTLMLFHLPGFLE 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + L + N+E+ ++ GTS L+ L A +++I + + + Sbjct: 62 LILPLAFFLGILLALGQLYLNSEITVLVACGTSPNRLLWVSLLPATVVAILVGLCSLWLT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVD--SR 179 P + + + L F L F + L+G+FI + R Sbjct: 122 PAGALQNEIILDEQSSQLDFGVLAPGRFQNFGGGRVAYTEALSEQERRLEGVFISERQRR 181 Query: 180 DTQTHKIYY--AQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 D T + A G +D + ++L+DGE + P + F +Y ++ A Sbjct: 182 DDGTPQTVVTRAAEGYQTIDEETGSRFLVLSDGERYSVEPGRAVAEHLSFGTYAVRLSRA 241 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + L + + L + + P ++ RL P++F +++++A Sbjct: 242 AAERDDLDDPEYATTPALFADGSAPAM---------AQLQWRLGLP--PMVF-ILTLLAM 289 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFLL 352 + ++ + + ++ + + I + + + ++ I LL Sbjct: 290 PLSRVNPRQGRFAKLLPAIFLYVAYLSLLLAALDAIARGAWPTTLGMWPIHAAFLVIGLL 349 Query: 353 MIKKKYTK 360 M + K Sbjct: 350 MTLRAQRK 357 >gi|213968383|ref|ZP_03396527.1| membrane protein [Pseudomonas syringae pv. tomato T1] gi|213927021|gb|EEB60572.1| membrane protein [Pseudomonas syringae pv. tomato T1] Length = 378 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 60/359 (16%), Positives = 130/359 (36%), Gaps = 31/359 (8%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ R + + ++ + ++ + +S +L I G+ +P L ++ Sbjct: 8 RYLSREVLLTLSAVSAVLLVFIMSGRFIKYLAQAASGALDPGVLFLIMGFRLPGFLQVIL 67 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + + +E+ ++ TG S+ L+ + A L+ + + + P+ Sbjct: 68 PLGLFLGILMAYGRLYLESEMTVLAATGMSQQRLLAITMGPAALVGLLVAWLSFSLAPQG 127 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYNPNNT-LQGIFIV------D 177 + QL + F L F L D I + + + + L G+FI D Sbjct: 128 AAQFSQLINQQDAMTEFDTLVPGRFQALRDGTRITYTKELSEDRSQLAGVFISEKRMSND 187 Query: 178 SRDTQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + A+ G ++ +IL +G + +P + D ++K+ +Y Sbjct: 188 KSKDNGITVLVAEKGHQEVQPNGSRFLILENGYRYDGNPGAADYRVVKYDTYGAALPKPE 247 Query: 235 SSTIVLKANDQNLSFLL-NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 S + S L NP P + +E R++ L I L++I Sbjct: 248 ISEEITDREAIPTSELFGNPAPRS-----------VAELQWRISLPLSVFIVTLMAIP-- 294 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFL 351 R RQ + + L + ++ + I+ + + + L L ++ + I+L Sbjct: 295 LSRVNPRQGRYLK-----LLPAILLYMSYLAILISVRSSLEKGKLPLSLGMWWVHGIYL 348 >gi|254242519|ref|ZP_04935841.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|126195897|gb|EAZ59960.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] Length = 372 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 54/360 (15%), Positives = 133/360 (36%), Gaps = 25/360 (6%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ R + + ++ I + ++ + + L I + IP L ++ Sbjct: 5 RYLSREVLVTMSAVSAVLLVIIMSGRFIKYLAQAAQGLLDPGSLFLIMAFRIPGFLQLIL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + + +E+ ++ TG S+ L+ + A+L++I + + P+ Sbjct: 65 PLGLFLGILLAYGRLYLESEMTVLSATGMSQKRLLGYTMAPALLVAILVAWLSLFLAPQG 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYNPN-NTLQGIFIVDSR---- 179 + L K F L F + D + + + + L GIFI Sbjct: 125 INQFALLLNKQDTLTEFDTLVPGRFQAMRDGTRVTYTEELSKDRGELAGIFISQKDLNSS 184 Query: 180 -DTQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + I A+ G+ ++ +IL++G + +P + +++ +Y + + Sbjct: 185 NQERGISILVAEKGTQNIQADGSRYLILHNGYRYDGNPGQANYRAIQYDTYGVMLPKPEA 244 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 S+ V + + + L + Y++E RL+ L + L+++ Sbjct: 245 SSEVSERDAVPTADLFGSDNP----------RYQAELQWRLSTPLLVFVVTLLAVP--LS 292 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN--PYYIPILYLFLFCISSIFLLM 353 R RQ + + + ++ + G + ++++ P I + ++ ++ LL Sbjct: 293 RVNPRQGRFLK-LLPAILLYMGYLALLIAVRGQLDKGKIPMAIGLWWVHGLFLAIGLLLF 351 >gi|28868483|ref|NP_791102.1| hypothetical protein PSPTO_1272 [Pseudomonas syringae pv. tomato str. DC3000] gi|301384649|ref|ZP_07233067.1| hypothetical protein PsyrptM_18512 [Pseudomonas syringae pv. tomato Max13] gi|302058898|ref|ZP_07250439.1| hypothetical protein PsyrptK_02842 [Pseudomonas syringae pv. tomato K40] gi|302133011|ref|ZP_07259001.1| hypothetical protein PsyrptN_16554 [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28851721|gb|AAO54797.1| membrane protein, putative [Pseudomonas syringae pv. tomato str. DC3000] gi|330963184|gb|EGH63444.1| hypothetical protein PSYAC_00750 [Pseudomonas syringae pv. actinidiae str. M302091] gi|331015232|gb|EGH95288.1| hypothetical protein PLA106_04717 [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 375 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 60/359 (16%), Positives = 130/359 (36%), Gaps = 31/359 (8%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ R + + ++ + ++ + +S +L I G+ +P L ++ Sbjct: 5 RYLSREVLLTLSAVSAVLLVFIMSGRFIKYLAQAASGALDPGVLFLIMGFRLPGFLQVIL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + + +E+ ++ TG S+ L+ + A L+ + + + P+ Sbjct: 65 PLGLFLGILMAYGRLYLESEMTVLAATGMSQQRLLAITMGPAALVGLLVAWLSFSLAPQG 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYNPNNT-LQGIFIV------D 177 + QL + F L F L D I + + + + L G+FI D Sbjct: 125 AAQFSQLINQQDAMTEFDTLVPGRFQALRDGTRITYTKELSEDRSQLAGVFISEKRMSND 184 Query: 178 SRDTQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + A+ G ++ +IL +G + +P + D ++K+ +Y Sbjct: 185 KSKDNGITVLVAEKGHQEVQPNGSRFLILENGYRYDGNPGAADYRVVKYDTYGAALPKPE 244 Query: 235 SSTIVLKANDQNLSFLL-NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 S + S L NP P + +E R++ L I L++I Sbjct: 245 ISEEITDREAIPTSELFGNPAPRS-----------VAELQWRISLPLSVFIVTLMAIP-- 291 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFL 351 R RQ + + L + ++ + I+ + + + L L ++ + I+L Sbjct: 292 LSRVNPRQGRYLK-----LLPAILLYMSYLAILISVRSSLEKGKLPLSLGMWWVHGIYL 345 >gi|323140935|ref|ZP_08075848.1| permease, YjgP/YjgQ family [Phascolarctobacterium sp. YIT 12067] gi|322414673|gb|EFY05479.1| permease, YjgP/YjgQ family [Phascolarctobacterium sp. YIT 12067] Length = 363 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 55/367 (14%), Positives = 122/367 (33%), Gaps = 17/367 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINL-VSSSTESLNILLKISGYLIPT 59 ++ + Y+L+ + F+ I +L +I ++ L + ++ Y +P Sbjct: 3 LRLLDRYVLKELLYPFVFGIAAFSSIFIASTMLFKITQYMTKYGAPLETVARLFMYNLPE 62 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 V+ P + ++ ++E+ + G S ++ PVL + +S+F + Sbjct: 63 VINYTFPMSMLLAALMAFGKLSGSSEITAMKAGGVSYYRIVAPVLVVGFFVSMFSMVWAE 122 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD---LYIKISKYNPN-NTLQGIFI 175 + P ++ + + T + ++ + +K++ + I I Sbjct: 123 KVVPTSKAKASIILNEEIRHNTRPTTQNHIIIKTISGDTQRVTYANKFDEKLGKMTDITI 182 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKS--YTLQTESA 233 + + +I A+ G + I+ DG V S KFK L Sbjct: 183 EEFNKGKIARIQTAKEGYWENGSWRIV--DGNVFALDDKDGVQSSAKFKEQIIPLNFSPK 240 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 S + + + L + + E R+ L F +I A Sbjct: 241 QISWEQKEPEEMTIREL-REYISMLEEQHTSAARQWCEIFMRINIPLASFFFAMIG---A 296 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL---FCISSIF 350 ++ + IS+ + F +++ + + P+L L C+ Sbjct: 297 CLGTQKQRTSSSIGLGISIIVIF-IYYAIMTFTTGLGKGGAMPPLLACALPNILCLGVGV 355 Query: 351 LLMIKKK 357 LM KK Sbjct: 356 YLMKKKN 362 >gi|119476403|ref|ZP_01616754.1| predicted Permease [marine gamma proteobacterium HTCC2143] gi|119450267|gb|EAW31502.1| predicted Permease [marine gamma proteobacterium HTCC2143] Length = 374 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 54/371 (14%), Positives = 128/371 (34%), Gaps = 26/371 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + I S ++ I + ++ + ++ S +ILL I Y +P+ L Sbjct: 2 ILFRYLAKEILISLFAVSATLLVIVMSGRFVKYLAQAAAGKLSPDILLNIMVYRLPSFLE 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + M +E+ ++ G S L L +I +++ + Sbjct: 62 LVLPLSLFIAILLAYGRMYVESEMTVMAACGLSDRRLAVYTLVPSICVAVVVGYLSLYAS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFF-RLDDDLYIKISKYNPN-NTLQGIFIVDSR- 179 P ++++ Q + L E F + + + +Q +F + Sbjct: 122 PIGIGKVQEIFEDTQNSSGLELLIEGRFRVDEQSGRVTYVESLDNDVGIMQDVFSAEQSL 181 Query: 180 ---DTQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYT-LQTE 231 + + +A+ G+I + ++L +G P I +F Y L + Sbjct: 182 GSEGEEQLTVIFAEQGNIQMSDDQQSRYLVLRNGYQSVGQPGGLRYRISQFDEYGQLVRD 241 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 A T+ +A+ + LLN L ++ R++ ++ +I+++ Sbjct: 242 PAVQKTLYKRADARTTEQLLN----------STLLEDKATLQWRMS---LVILVPVIALI 288 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSI 349 A +R + + + I + I E+ + + ++ L + Sbjct: 289 AQALSRTSHRRGRYVKMLPAFIIYITYLVALNAARDAIGKEKISSDLGMWWVHLVFLGLG 348 Query: 350 FLLMIKKKYTK 360 L+ + + Sbjct: 349 ITLLFGGDWLR 359 >gi|224368912|ref|YP_002603074.1| putative permease [Desulfobacterium autotrophicum HRM2] gi|223691629|gb|ACN14912.1| putative permease [Desulfobacterium autotrophicum HRM2] Length = 359 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 81/372 (21%), Positives = 150/372 (40%), Gaps = 31/372 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y L+ R F + + ++ I + L + S SL L IP + Sbjct: 1 MSILHRYWLKEFTRFFAIVQMLLLCIFLAVDYLSNMEKFLRSNFSLIQGLGYILLKIPFM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 TP + T V + MNRN ELL + +G S L+KPV+ + ++L++ + Sbjct: 61 FVQFTPAGVVLATIVVFSLMNRNNELLALKGSGVSVYHLLKPVVLVGVILAMTMIFLGET 120 Query: 121 IEPKCRSTIKQLSAK-AQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVD- 177 I P + + + + EN++ R D + I I+ +NP +N++ GI I Sbjct: 121 IVPYTMAKANHIRSSTLKKNKKIYATWENIWIR-DGNKIIHINYFNPADNSISGITITSF 179 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAI--ILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 D + A++G D + + +L + DI K++ L E A+ Sbjct: 180 GADFKIATRVDAENGRFDSGQWQLSNVLEQNN--PGDEHNADIQFYDHKAFALDVEPADL 237 Query: 236 STIVLKANDQNLSFLLN--PNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 T+ K + ++ L N Y Y +F ++ FP+I ++++V A Sbjct: 238 KTVAKKTDQMSIQELKAYIHKIENEGYDA---THYIVDFWAKIA---FPIICLVMALVGA 291 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSY-IIHKIEQNPYYIPILY---------LFL 343 L ++ + L I+ G+ F Y ++H + Y ++ L Sbjct: 292 GAGMLSAAKENM-----PLGIALGIGVAFCYWVVHGFCTSLGYGGMIPPFLSAWTADLIF 346 Query: 344 FCISSIFLLMIK 355 C+++IFL+ + Sbjct: 347 ICLTTIFLVTVN 358 >gi|15599023|ref|NP_252517.1| hypothetical protein PA3828 [Pseudomonas aeruginosa PAO1] gi|116051856|ref|YP_789301.1| hypothetical protein PA14_14500 [Pseudomonas aeruginosa UCBPP-PA14] gi|218889888|ref|YP_002438752.1| putative permease [Pseudomonas aeruginosa LESB58] gi|254236732|ref|ZP_04930055.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|296387656|ref|ZP_06877131.1| putative permease [Pseudomonas aeruginosa PAb1] gi|313109247|ref|ZP_07795215.1| hypothetical protein PA39016_001710056 [Pseudomonas aeruginosa 39016] gi|9950003|gb|AAG07215.1|AE004800_4 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] gi|115587077|gb|ABJ13092.1| putative permease [Pseudomonas aeruginosa UCBPP-PA14] gi|126168663|gb|EAZ54174.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|218770111|emb|CAW25873.1| putative permease [Pseudomonas aeruginosa LESB58] gi|310881717|gb|EFQ40311.1| hypothetical protein PA39016_001710056 [Pseudomonas aeruginosa 39016] Length = 372 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 54/360 (15%), Positives = 133/360 (36%), Gaps = 25/360 (6%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ R + + ++ I + ++ + + L I + IP L ++ Sbjct: 5 RYLSREVLVTMSAVSAVLLVIIMSGRFIKYLAQAAQGLLDPGSLFLIMAFRIPGFLQLIL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + + +E+ ++ TG S+ L+ + A+L++I + + P+ Sbjct: 65 PLGLFLGILLAYGRLYLESEMTVLSATGMSQKRLLGYTMAPALLVAILVAWLSLFLAPQG 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYNPN-NTLQGIFIVDSR---- 179 + L K F L F + D + + + + L GIFI Sbjct: 125 INQFALLLNKQDTLTEFDTLVPGRFQAMRDGTRVTYTEELSKDRGELAGIFISQKDLNSS 184 Query: 180 -DTQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + I A+ G+ ++ +IL++G + +P + +++ +Y + + Sbjct: 185 NQERGISILVAEKGTQNIQADGSRYLILHNGYRYDGNPGQANYRAIQYDTYGVMLPKPEA 244 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 S+ V + + + L + Y++E RL+ L + L+++ Sbjct: 245 SSEVSERDAVPTADLFGSDNP----------RYQAELQWRLSTPLLVFVVTLLAVP--LS 292 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN--PYYIPILYLFLFCISSIFLLM 353 R RQ + + + ++ + G + ++++ P I + ++ ++ LL Sbjct: 293 RVNPRQGRFLK-LLPAILLYMGYLALLIAVRGQLDKGKIPMAIGLWWVHGLFLAIGLLLF 351 >gi|310766279|gb|ADP11229.1| Putative permease [Erwinia sp. Ejp617] Length = 366 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 50/337 (14%), Positives = 120/337 (35%), Gaps = 22/337 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGEIPTNLVLTLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G + L+K + L + ++ ++ + Sbjct: 62 LILPLSLFLAILMTLGRLYTESEITVMHACGLGKSVLVKAAMILMLFTALLAAVNVGWLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+ + L F + D + + +T +F+ R Sbjct: 122 PWSSRYQNEVMQNAKANPGAAALAAGQFQQSGDGQSVLFIENVKGSTFSNVFLAQLRPKG 181 Query: 183 T--HKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + AQ G + Q + L+ G + + +D I FK+Y + Sbjct: 182 NARPSVVVAQQGHMEQRVDGSQIVTLDSGTRFEGTALLRDFRITDFKNYQAIIGHQAVTL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + +L L + + + +RSE H RLT +I L+ + Sbjct: 242 DPNDSEQMSLDTLWHSDKPD----------FRSELHWRLTLVFSVLIMALMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY 334 RQ + +S+ + ++ F + + + Sbjct: 290 NPRQGR-----VLSMLPAMLLYLVFFLLQSSLRSSGS 321 >gi|268683689|ref|ZP_06150551.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679] gi|268623973|gb|EEZ56373.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679] Length = 384 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 46/365 (12%), Positives = 145/365 (39%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ +++ + + + + ++ + Q + + + +++ +L + G+ + + P Sbjct: 15 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTP 74 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ +I + + + + Sbjct: 75 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAILIAVMQLWVI 134 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLD--DDLYIKISKYN-PNNTLQGIFIVDSR 179 P ++ + + S +E F L + + ++ + ++ +F+ + Sbjct: 135 PWAELRNREYAEILKQKQELSLVEAGEFNNLGKRNGRVYFVETFDTESGIMKNLFLREQD 194 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE-SANSS 236 I +A+ G S++ +++ + L G + +P D + + F+ L + Sbjct: 195 KNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTTPKLI 254 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + + L+ +NP ++ +E R++ + L+ ++A Sbjct: 255 DPVSHRRTISTAQLIG--SSNPQHQ--------AELMWRISLTV---SVLLLCLLAVPLS 301 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP--YYIPILYLFLFCISSIFLLMI 354 + + I I++ + G + + +E +++ +L + + +L+ Sbjct: 302 YFNPRSGHTYNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFVIAIVLLR 361 Query: 355 KKKYT 359 + Sbjct: 362 VRSMP 366 >gi|261392198|emb|CAX49712.1| conserved hypothetical integral membrane protein [Neisseria meningitidis 8013] Length = 371 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 46/365 (12%), Positives = 144/365 (39%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ +++ + + + + ++ + Q + + + +++ +L + G+ I + P Sbjct: 2 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWIIGMTP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ ++ + + + + Sbjct: 62 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWVI 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLD--DDLYIKISKYN-PNNTLQGIFIVDSR 179 P ++ + + S +E F L + + ++ + ++ +F+ + Sbjct: 122 PWAELRSREYAEILKQKQELSLVEAGEFNSLGKRNGRVYFVETFDTESGIMKNLFLREQD 181 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE-SANSS 236 I +A+ G S++ +++ + L G + +P D + + F+ L + Sbjct: 182 KNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTTPKLI 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + L+ +NP ++ +E R++ + L+ ++A Sbjct: 242 DPVSHRRTIPTAQLIG--SSNPQHQ--------AELMWRISLTV---SVLLLCLLAVPLS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP--YYIPILYLFLFCISSIFLLMI 354 + + I I++ + G + + +E +++ +L + + +L+ Sbjct: 289 YFNPRSGHTYNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFVIAIVLLR 348 Query: 355 KKKYT 359 + Sbjct: 349 VRSMP 353 >gi|15677420|ref|NP_274576.1| hypothetical protein NMB1570 [Neisseria meningitidis MC58] gi|304387021|ref|ZP_07369276.1| YjgP/YjgQ family permease [Neisseria meningitidis ATCC 13091] gi|7226817|gb|AAF41923.1| conserved hypothetical protein [Neisseria meningitidis MC58] gi|304338893|gb|EFM04992.1| YjgP/YjgQ family permease [Neisseria meningitidis ATCC 13091] gi|316983818|gb|EFV62798.1| conserved hypothetical protein [Neisseria meningitidis H44/76] gi|325140780|gb|EGC63294.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis CU385] gi|325199831|gb|ADY95286.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis H44/76] Length = 371 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 45/365 (12%), Positives = 145/365 (39%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ +++ + + + + ++ + Q + + + +++ +L + G+ + + P Sbjct: 2 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ ++ + + + + Sbjct: 62 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWVI 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLD--DDLYIKISKYN-PNNTLQGIFIVDSR 179 P ++ + + S +E F L + + ++ + ++ +F+ + Sbjct: 122 PWAELRSREYAEILKQKQELSLVEAGEFNSLGKRNGRVYFVETFDTESGIMKNLFLREQD 181 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE-SANSS 236 I +A+ G S++ +++ + L G + +P D + + F+ L + Sbjct: 182 KNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTTPKLI 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + L+ +NP ++ +E R++ + L+ ++A Sbjct: 242 DPVSHRRTIPTAQLIG--SSNPQHQ--------AELMWRISLTV---SVLLLCLLAVPLS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP--YYIPILYLFLFCISSIFLLMI 354 + + I I++ + G + + +E +++ +L + + + +L+ Sbjct: 289 YFNPRSGHTYNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFAVALILLR 348 Query: 355 KKKYT 359 + Sbjct: 349 VRSMP 353 >gi|240122360|ref|ZP_04735316.1| hypothetical protein NgonP_00185 [Neisseria gonorrhoeae PID332] gi|240125094|ref|ZP_04737980.1| hypothetical protein NgonSK_02547 [Neisseria gonorrhoeae SK-92-679] gi|254494457|ref|ZP_05107628.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291] gi|268680947|ref|ZP_06147809.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332] gi|226513497|gb|EEH62842.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291] gi|268621231|gb|EEZ53631.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332] Length = 371 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 46/365 (12%), Positives = 145/365 (39%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ +++ + + + + ++ + Q + + + +++ +L + G+ + + P Sbjct: 2 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ +I + + + + Sbjct: 62 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAILIAVMQLWVI 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLD--DDLYIKISKYN-PNNTLQGIFIVDSR 179 P ++ + + S +E F L + + ++ + ++ +F+ + Sbjct: 122 PWAELRNREYAEILKQKQELSLVEAGEFNNLGKRNGRVYFVETFDTESGIMKNLFLREQD 181 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE-SANSS 236 I +A+ G S++ +++ + L G + +P D + + F+ L + Sbjct: 182 KNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTTPKLI 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + + L+ +NP ++ +E R++ + L+ ++A Sbjct: 242 DPVSHRRTISTAQLIG--SSNPQHQ--------AELMWRISLTV---SVLLLCLLAVPLS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP--YYIPILYLFLFCISSIFLLMI 354 + + I I++ + G + + +E +++ +L + + +L+ Sbjct: 289 YFNPRSGHTYNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFVIAIVLLR 348 Query: 355 KKKYT 359 + Sbjct: 349 VRSMP 353 >gi|149186433|ref|ZP_01864746.1| predicted permease [Erythrobacter sp. SD-21] gi|148830022|gb|EDL48460.1| predicted permease [Erythrobacter sp. SD-21] Length = 409 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 55/368 (14%), Positives = 138/368 (37%), Gaps = 25/368 (6%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI R + + + + + ++L+ ++ V+ + ++ K+ L+P + Sbjct: 8 IDRYIARLVIVPMVGVFVLAASLLVLDKMLRLLDFVAVEGGPVGVVFKMLATLLPEYASL 67 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + + +EL + G S L++ + +L I+P Sbjct: 68 AIPLGLLLGILLAFRKLATTSELDVFRAVGMSYGRLLRVPFLITGVLMTLNVALVFFIQP 127 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSRDTQ 182 R T ++L + + + ++ F L D + ++I + + L+GIF + D Sbjct: 128 VSRFTYERLEYELRSGALGASIKVGEFTTLADRMALRIEESEDDGRQLKGIFARVANDKG 187 Query: 183 THKIYYAQSGSI-----DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 A+ G+ D D + L +G + + S+ ++ F + L + Sbjct: 188 QVLSISAKEGNFLATTDDPDTIILRLTEGTIVQ-DTGSQTPRVLTFTRHDLPIDLPAIEE 246 Query: 238 IVLK---ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + + L LL + N + ++ F+ RL + V+ L+ ++A Sbjct: 247 FRARGEDEREYILPELLRIGWAD-NQTESKRDASQASFNFRLVE---VVMMALMPLLAVA 302 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI------LYLFLFCISS 348 ++ +F+S+ + + +++ ++ I + L++ F ++ Sbjct: 303 LGIPPKRSTSALGVFLSI-----IMVVAYHKVNQYGEDLAAIGMFDPILALWVPFFLFAA 357 Query: 349 IFLLMIKK 356 + L M + Sbjct: 358 LILWMYYR 365 >gi|257468007|ref|ZP_05632103.1| hypothetical protein FulcA4_01647 [Fusobacterium ulcerans ATCC 49185] gi|317062293|ref|ZP_07926778.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185] gi|313687969|gb|EFS24804.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185] Length = 358 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 59/364 (16%), Positives = 129/364 (35%), Gaps = 14/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YIL + L FI + I+ + + S+ +++I + +P + Sbjct: 1 MKIIEKYILEEVKMPILFGISLFTFIFLIDIIVAMMENIIVKGISIIDIMRILSFYLPPI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + + R +E + + G ++KP+ LA ++F+F + Sbjct: 61 LSQTIPMGIFLGVMLTFSKFTRTSEATAMSSIGMDLRGIVKPIFILACATTLFIFFLQES 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVD-S 178 I P+ S ++ ++ K L+E F ++ + I + + QG+ I + Sbjct: 121 IIPRSFSKLQYITTKIAYENPVFQLKEKTFIDEVEEYNLYIDRIEGKDRVAQGVLIFQKN 180 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT--LQTESANSS 236 D + + + ++++ D + + K+ +F L Sbjct: 181 EDVEFPTVLVGKEAYWK--DSSMVITDSKFYDFDKDGKEKLRGEFDDKKVPLDAYFDGID 238 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V ++S LL + P Y+ E +++L L + ++S++ Sbjct: 239 IKVKDIEAMSISMLLKEMKDLPQNEKIP---YKVEINRKLALPLSTI---MLSLLGVFIS 292 Query: 297 ALVRQRKKIHPIFISLSISFGV--FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + K +SL + F F ++ + P ++ + + F Sbjct: 293 IGHHRSGKGANFALSLVVIFSYITFLNIGMVMANRGKIPPFVGVWTPNIILFLVTFYFYK 352 Query: 355 KKKY 358 KK Sbjct: 353 KKSR 356 >gi|121635227|ref|YP_975472.1| hypothetical protein NMC1490 [Neisseria meningitidis FAM18] gi|254805325|ref|YP_003083546.1| putative permease [Neisseria meningitidis alpha14] gi|120866933|emb|CAM10693.1| conserved integral membrane hypothetical protein [Neisseria meningitidis FAM18] gi|254668867|emb|CBA06967.1| putative permease [Neisseria meningitidis alpha14] gi|254669825|emb|CBA04193.1| conserved hypothetical protein [Neisseria meningitidis alpha153] gi|254672903|emb|CBA07222.1| conserved hypothetical protein [Neisseria meningitidis alpha275] gi|325138630|gb|EGC61189.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis ES14902] gi|325142745|gb|EGC65120.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis 961-5945] gi|325198680|gb|ADY94136.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis G2136] Length = 371 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 45/365 (12%), Positives = 144/365 (39%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ +++ + + + + ++ + Q + + + +++ +L + G+ + + P Sbjct: 2 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ ++ + + + + Sbjct: 62 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWVI 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLD--DDLYIKISKYN-PNNTLQGIFIVDSR 179 P ++ + + S +E F L + + ++ + ++ +F+ + Sbjct: 122 PWAELRSREYAEILKQKQELSLVEAGEFNSLGKRNGRVYFVETFDTESGIMKNLFLREQD 181 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE-SANSS 236 I +A+ G S++ +++ + L G + +P D + + F+ L + Sbjct: 182 KNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTTPKLI 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + L+ +NP ++ +E R++ + L+ ++A Sbjct: 242 DPVSHRRTIPTAQLIG--SSNPQHQ--------AELMWRISLTV---SVLLLCLLAVPLS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP--YYIPILYLFLFCISSIFLLMI 354 + + I I++ + G + + +E +++ +L + + +L+ Sbjct: 289 YFNPRSGHTYNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFVIAIVLLR 348 Query: 355 KKKYT 359 + Sbjct: 349 VRSMP 353 >gi|161870424|ref|YP_001599597.1| hypothetical protein NMCC_1472 [Neisseria meningitidis 053442] gi|161595977|gb|ABX73637.1| conserved hypothetical protein [Neisseria meningitidis 053442] Length = 432 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 45/365 (12%), Positives = 144/365 (39%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ +++ + + + + ++ + Q + + + +++ +L + G+ + + P Sbjct: 63 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTP 122 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ ++ + + + + Sbjct: 123 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWVI 182 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLD--DDLYIKISKYN-PNNTLQGIFIVDSR 179 P ++ + + S +E F L + + ++ + ++ +F+ + Sbjct: 183 PWAELRSREYAEILKQKQELSLVEAGGFNSLGKRNGRVYFVETFDTESGIMKNLFLREQD 242 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE-SANSS 236 I +A+ G S++ +++ + L G + +P D + + F+ L + Sbjct: 243 KNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTTPKLI 302 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + L+ +NP ++ +E R++ + L+ ++A Sbjct: 303 DPVSHRRTIPTAQLIG--SSNPQHQ--------AELMWRISLTV---SVLLLCLLAVPLS 349 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP--YYIPILYLFLFCISSIFLLMI 354 + + I I++ + G + + +E +++ +L + + +L+ Sbjct: 350 YFNPRSGHTYNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFVIAIVLLR 409 Query: 355 KKKYT 359 + Sbjct: 410 VRSMP 414 >gi|152973138|ref|YP_001338284.1| putative transmembrane protein, transport [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238892750|ref|YP_002917484.1| putative transport system transmembrane component [Klebsiella pneumoniae NTUH-K2044] gi|262045294|ref|ZP_06018319.1| inner membrane protein YjgP [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|290512174|ref|ZP_06551541.1| transmembrane protein yjgP [Klebsiella sp. 1_1_55] gi|330016471|ref|ZP_08308444.1| lipopolysaccharide export system permease protein LptF [Klebsiella sp. MS 92-3] gi|150957987|gb|ABR80017.1| putative transmembrane protein, transport [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238545066|dbj|BAH61417.1| putative transport system transmembrane component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259037350|gb|EEW38596.1| inner membrane protein YjgP [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|289775169|gb|EFD83170.1| transmembrane protein yjgP [Klebsiella sp. 1_1_55] gi|328528832|gb|EGF55775.1| lipopolysaccharide export system permease protein LptF [Klebsiella sp. MS 92-3] Length = 365 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 57/364 (15%), Positives = 125/364 (34%), Gaps = 25/364 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G IP + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPTNLVLSLLGLGIPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ LIK + LA+ ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLIKAAMILALFTGAVAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + D + + N +F+ R Sbjct: 122 PWSSRHQDEVLAEAKANPGMAALAQGQFQQASDGNAVMFIESVNGNRFHDVFLAQLRPKG 181 Query: 183 T--HKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F +Y S Sbjct: 182 NARPSVVVADSGELSQQKDGSQVVTLNKGTRFEGTAMLRDFRITDFNNYQAIIGHQAVSA 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 ++ L + R+E H R T I L+ + Sbjct: 242 DPDDTEQMDMRTLW----------KTHTDRARAELHWRFTLVATVFIMALMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFLFCISSIFLLMI 354 RQ + +S+ + ++ F + I+ N P ++++ + L ++ Sbjct: 290 NPRQGR-----VLSMLPAMLLYLVFFLLQTSIKSNGGKGKMDPAIWMWAINLLYFALAVL 344 Query: 355 KKKY 358 + Sbjct: 345 LNLW 348 >gi|304396396|ref|ZP_07378277.1| permease YjgP/YjgQ family protein [Pantoea sp. aB] gi|304355905|gb|EFM20271.1| permease YjgP/YjgQ family protein [Pantoea sp. aB] Length = 366 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 53/364 (14%), Positives = 135/364 (37%), Gaps = 25/364 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGEVPTNLVLTLLGLGVPQMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + L + S+ ++ + Sbjct: 62 LILPLSLFLAILMTLGRLYTESEITVMHACGLSKAVLVKAAMILMLFTSVVAAVNVIWLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +++ A+ + + F D + + N +F+ R Sbjct: 122 PWSSRYQDEVTQNAKANPGAAAMAAGQFQTSGDGSAVLFVENVKGNNFGNVFLAQLRPKG 181 Query: 183 T--HKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG ++ Q + L+ G + + +D I F +Y ++ Sbjct: 182 NARPSVVLADSGHLEQRKDGSQVVTLDKGTRFEGTALLRDFRITDFTNYQAIVGYKAATL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + +LS L+ + +++E H RLT ++ L+ + Sbjct: 242 DPNDSEQASLSDLVANKTPD----------FQAELHWRLTLVFAVLVMALMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFLFCISSIFLLMI 354 RQ + +S+ + ++ F + ++ + P L++++ IS + L ++ Sbjct: 290 NPRQGR-----VLSMLPAMLLYLIFFLLQSSLKSSGAKGRLDPALWMWVVNISYLVLAVL 344 Query: 355 KKKY 358 + Sbjct: 345 LNLW 348 >gi|288937433|ref|YP_003441492.1| permease YjgP/YjgQ family protein [Klebsiella variicola At-22] gi|288892142|gb|ADC60460.1| permease YjgP/YjgQ family protein [Klebsiella variicola At-22] Length = 365 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 56/364 (15%), Positives = 126/364 (34%), Gaps = 25/364 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G IP + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPTNLVLSLLGLGIPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ LIK + LA+ ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLIKAAMILALFTGAVAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + D + + N +F+ R Sbjct: 122 PWSSRHQDEVLAEAKANPGMAALAQGQFQQASDGNAVMFIESVNGNRFHDVFLAQLRPKG 181 Query: 183 T--HKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F +Y ++ Sbjct: 182 NARPSVVVADSGELSQQKDGSQVVTLNKGTRFEGTAMLRDFRITDFNNYQAIIGHQAVTS 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 ++ L + R+E H R T I L+ + Sbjct: 242 DPDDTEQMDMRTLWQ----------THTDRARAELHWRFTLVATVFIMALMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFLFCISSIFLLMI 354 RQ + +S+ + ++ F + I+ N P ++++ + L ++ Sbjct: 290 NPRQGR-----VLSMLPAMLLYLVFFLLQTSIKSNGGKGKMDPAIWMWAINLLYFALAVL 344 Query: 355 KKKY 358 + Sbjct: 345 LNLW 348 >gi|121534980|ref|ZP_01666798.1| permease YjgP/YjgQ family protein [Thermosinus carboxydivorans Nor1] gi|121306393|gb|EAX47317.1| permease YjgP/YjgQ family protein [Thermosinus carboxydivorans Nor1] Length = 361 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 52/368 (14%), Positives = 126/368 (34%), Gaps = 22/368 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPT 59 M+ + YIL+ + F+ + + + ++ S+ + K+ Y +P Sbjct: 1 MRILDKYILKEMLGPFIFGIAAFSSVFIGTSTLFRLARYITEYGASVYSVTKLFIYSLPG 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ + P + + ++ ++E+ + + G S L PV A ++SI I Sbjct: 61 IIVLTFPMSMLLASLLAFGRLSASSEITAMKSGGLSFFRLAAPVFIAAFVVSIVAVILNE 120 Query: 120 IIEPKCRSTIKQLSA--------KAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTL 170 + P+ + + + K Q + +++ RL K++ N + Sbjct: 121 AVVPRANNAYQNVLRYEIEKSRPKTQEHIVIKDVKDGEIERLT-----YARKFDEAANAM 175 Query: 171 QGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT 230 + + + + ++ A+ D R I+ G ++ +P + ++F + Sbjct: 176 YAVTVQEFDKGRLVRVENAEKAIWDNGR--WIMESGIIYDVAPEGQLQRTLRFDKQFMPV 233 Query: 231 ESANSSTIV--LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 E + K + + L + TY E H+RL ++F LI Sbjct: 234 EKSPREIAREQKKPEEMTIKELKQHIKVLQREYVKT-STYEVELHQRLAIPAASLVFALI 292 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 + + I + I + + F+ + + ++ Sbjct: 293 GTPLGLQPHRSSSSIGLGISIIIIFIYYTIMTVFTALGQGGA--IPAVLAAWIPNIVFII 350 Query: 349 IFLLMIKK 356 I +I+K Sbjct: 351 IGAFLIRK 358 >gi|253583477|ref|ZP_04860675.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725] gi|251834049|gb|EES62612.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725] Length = 358 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 58/364 (15%), Positives = 130/364 (35%), Gaps = 14/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YIL + L FI + I+ + + S+ +++I + +P + Sbjct: 1 MKIIEKYILEEVKMPILFGISLFTFIFLIDIIVAMMENIIVKGISIIDIMRILSFYLPPI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + + R +E + + G ++KP+ LA + ++F+F + Sbjct: 61 LSQTIPMGIFLGVMLTFSKFTRTSESTAMSSIGMDLREIVKPIFILACITTLFIFFLQES 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 I P+ + ++ ++ K L+E F D+ + I + + QG+ I Sbjct: 121 IIPRSFTKLQYITTKIAYENPVFQLKEKTFIDEVDEYNLYIDRIEGKDRIAQGVLIFQKD 180 Query: 180 -DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 D + + + ++++ D + + K+ +F + + Sbjct: 181 EDVEFPTVLVGKEAYWK--DSSMVITDSKFYDFDKDGKEKLRGEFDDKKVPLTAYFDGID 238 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V ++S L+ P Y+ E +++L L + ++S++ Sbjct: 239 IKVKDIEAMSISMLMKEMKELPKNEKIP---YKVEINRKLALPLSTI---MLSLLGVFIS 292 Query: 297 ALVRQRKKIHPIFISLSISFGV--FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + K +SL++ F F ++ + P +I + + F Sbjct: 293 IGHHRSGKGANFALSLAVIFSYITFLNIGMVMANRGKVPPFIGVWTPNIILFLVTFYFYK 352 Query: 355 KKKY 358 KK Sbjct: 353 KKSR 356 >gi|110833357|ref|YP_692216.1| hypothetical protein ABO_0496 [Alcanivorax borkumensis SK2] gi|110646468|emb|CAL15944.1| membrane protein, putative [Alcanivorax borkumensis SK2] Length = 368 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 54/371 (14%), Positives = 139/371 (37%), Gaps = 28/371 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 YI R + + ++ +V + + ++ + ++ + + L + + +P L Sbjct: 2 ILHRYINRQVFMTTVLVTFILVMVLVSGRFIKYLAEAAAGQIAADALFLVMAFRMPEFLQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M+ P + VL M+ + E++++ G +++ ++ ++ ++ + + + Sbjct: 62 MIVPLSLYVALLLVLGRMHMDNEMVVLQAGGQGNGRVVRSLVVPILMATMLVGMFSLYVT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFF---RLDDDLYIKISKYN-PNNTLQGIFIVDS 178 P+ + + ++ + + L F D N L+ +F+ D+ Sbjct: 122 PRGDAEVNRIFEEQKDRSVLELLTPGRFHVKGSSDSQRATYAEHLNREKGVLENVFVADA 181 Query: 179 R-----DTQTHKIYYAQSGSIDLDR--QAIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 R +A+SG + ++ ++L DG ++ P D + FK ++ Sbjct: 182 RFESQGGAGRLLTVWAKSGKLVVEDGISYLLLTDGLQYQGKPGQLDYKEVGFKEARVRIG 241 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 + + K ++ L+ +N + +E R++ L I L +I Sbjct: 242 GEKTDSRPPKVRGRSTQELMEQQADN--------KEALAELQWRISLILTVPIMALAAIP 293 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-----PYYIPILYLFLFCI 346 A R RQ + I L + G + ++ P+Y+ ++++ + Sbjct: 294 LA--RVNPRQGRFYRLIPAVLGYML--YVGMLLVCRSAIEDHKGVLPWYLSMVWIHVSAG 349 Query: 347 SSIFLLMIKKK 357 +FLL + Sbjct: 350 LVVFLLYFGAR 360 >gi|301058944|ref|ZP_07199913.1| permease, YjgP/YjgQ family [delta proteobacterium NaphS2] gi|300446940|gb|EFK10736.1| permease, YjgP/YjgQ family [delta proteobacterium NaphS2] Length = 358 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 56/332 (16%), Positives = 120/332 (36%), Gaps = 21/332 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + YI+R I + + C ++ I + + + ++ + I L Sbjct: 2 IIDRYIMREISKPAMTICTVLMGIFGSYIATRYLEDAVQGQLPGSTVILLVLLRIAISLE 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + N E+ + G S + ++KPV+ LA+ + + I Sbjct: 62 VLLPTTLYLSVMIAFGRFYMNAEMTGMSACGISMVRVLKPVMLLAVTAGMIVACFSLYIR 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPN-NTLQGIFIVDSRD 180 P + +L A++ + ++ F+ ++D + K + + +F+ R Sbjct: 122 PWAWNQFFELKTGAKVDFDITRMKGGNFYEIEDGERVLFADKVDHGKHRALHVFMQIKRH 181 Query: 181 TQTHKIYYAQSGSID----LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + I YA+S + ++ +G ++ S K I++F++ + S N Sbjct: 182 GELE-IVYAESATQRFRNTTPEPVLVFQNGRLYTFSETEKTWKILQFRNLEMSLTSNNVE 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + KA + L + + +E RLT ++ L+ + R Sbjct: 241 PLKQKAKAFSTEQLWHSDHPEAL----------AELQWRLTAPFSTILLALLGVP--LSR 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHK 328 + RQ K L F V++ S I K Sbjct: 289 SFPRQGKYTKVPLGILV--FAVYYNLSAITKK 318 >gi|126031980|gb|ABN71556.1| putative permease [uncultured bacterium] Length = 402 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 55/366 (15%), Positives = 136/366 (37%), Gaps = 18/366 (4%) Query: 1 MKSF---ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLI 57 MK F + YI R + L + + + ++L+ + V++ ++++ ++ L+ Sbjct: 1 MKLFTSVDRYIFRLVAMPMLAVFVIAASLLVLDKMLKLFDFVATEGGPVSVVFRMLANLL 60 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 P + P + + ++EL ++ G L++ +A+ L+ + Sbjct: 61 PEYASLAIPIGLMLGILFAFRKLATSSELDVMRAVGLGYGRLLRVPFIMAVGLAGVNLVI 120 Query: 118 ENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIV 176 ++P R +QL + + + ++ F L D + ++I + L GIF+ Sbjct: 121 VGYLQPLSRYYYEQLQFELRSGALGASIKVGEFTTLKDKIALRIERSEDEGRKLMGIFVR 180 Query: 177 DSRDTQTHKIYYAQSGSI-----DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 + D A+ G + D L+DG++ + SP ++ F + L + Sbjct: 181 VADDQGQVLSVSAREGRFLALKDNPDTIVFRLSDGQIVQDSPGV-TPRVLTFSRHDLPID 239 Query: 232 SANSSTIVLK---ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 + + L LL N+ + R+ F+ R+ + + + L+ Sbjct: 240 LPALERFRQRGGGEREYLLPELLRLGWNDEVPLTQ-RNINRANFNYRMVEVV---MMLLL 295 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCIS 347 ++A ++ +F+S+ + Y + + L+ + Sbjct: 296 PLLAVALAVPPKRSTSALGVFVSIVMVVAYHKVNEYGQSIAALGKSGVLLALWGPFVVFA 355 Query: 348 SIFLLM 353 ++ + M Sbjct: 356 AMIVWM 361 >gi|311747143|ref|ZP_07720928.1| membrane protein [Algoriphagus sp. PR1] gi|126578851|gb|EAZ83015.1| membrane protein [Algoriphagus sp. PR1] Length = 604 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 51/263 (19%), Positives = 104/263 (39%), Gaps = 8/263 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + IL FL++ L + FI + +L+ + + I +++ Y + ++ Sbjct: 1 MKKLDKLILGSFIGPFLLTFLVVDFILLTVNMLKYFDEIFGKGLDFWIYMELISYFVISI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 PM P + + ++ + EL I ++G S I ++ + I+LS ++S N Sbjct: 61 SPMALPLAVLLSSLMTFGNLGEHFELTAIKSSGISLIRAMRSIGVFVIVLSFAAYLSNNH 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + PK L ++ ++E +F+ IK++K + L+ I I D Sbjct: 121 LVPKVNLKTFSLLYDIRMKSPALDIKEGVFYNGIPGYSIKVNKKLDDVRLKDIIIYDHTG 180 Query: 181 -TQTHKIYYAQSGSI----DLDRQAIILNDGEVHRKSPISKDISI--MKFKSYTLQTESA 233 + A SG + + + L +G + + S+ I+ + F +T Sbjct: 181 VQGNLNVTLADSGRMETFFNDSYMRLTLYNGINYSEERQSRGIAEKPVNFSRGEFETNVI 240 Query: 234 NSSTIVLKANDQNLSFLLNPNPN 256 S + D+ L + N Sbjct: 241 VFSLDAFQM-DRTPEDLWSTNRA 262 >gi|238028370|ref|YP_002912601.1| permease [Burkholderia glumae BGR1] gi|237877564|gb|ACR29897.1| Permease, putative [Burkholderia glumae BGR1] Length = 363 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 63/368 (17%), Positives = 140/368 (38%), Gaps = 24/368 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ I +++ + +S S +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTIMLTSMMIRIVGYAASGQVSPKDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M+ + VLT R++E+++ +G S LI+P+ + + + + + Sbjct: 62 MILVGTLFVSILFVLTRWYRDSEMVVWLASGVSLTRLIRPIGVFSTPIVLLIAFFAFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIKISKYNPNN-TLQGIFIVDSRD 180 P K + A+ Q S L F I K +P+ +Q +F+ + + Sbjct: 122 PWSNQQSKLIKARFQQRDEVSLLAPGQFRESTATHRVFFIEKMSPDQARVQNVFVTTT-E 180 Query: 181 TQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 I +Q+G ++ ++ I+L +G + P + IM+F+ Y ++ +S T Sbjct: 181 QGKVNIVVSQTGRVETEKNGDRFIVLENGRRYDGVPGQPNFKIMQFERYGVKIQSKQVVT 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L L +P N +EF R L + +++I A Sbjct: 241 QPTTTSTSTLELLRDPTKENL-----------AEFAWRAGLPLIAINLMILAIPLA---Y 286 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN----PYYIPILYLFLFCISSIFLLM 353 +R + + +++ I + + +IE+ + +L+L + I + + Sbjct: 287 QNPRRGRTVNLVMAVLIYLTYSNLLNVVQSQIERGKLPFGVGLVVLHLVVAGIVAFLFWL 346 Query: 354 IKKKYTKI 361 + I Sbjct: 347 RVRNRPLI 354 >gi|88859092|ref|ZP_01133733.1| hypothetical protein PTD2_08809 [Pseudoalteromonas tunicata D2] gi|88819318|gb|EAR29132.1| hypothetical protein PTD2_08809 [Pseudoalteromonas tunicata D2] Length = 348 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 53/342 (15%), Positives = 124/342 (36%), Gaps = 22/342 (6%) Query: 26 IAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTE 85 I + ++ + + + +++ + +P + + P + + + ++E Sbjct: 3 IFVSEKFVRILTEATDGSLPAKLIISMLALKLPQLASFILPLSIFLGIILAYSRIYADSE 62 Query: 86 LLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYL 145 + + G S +++ L + +L++F ++ P +L KA+ L Sbjct: 63 MTVFKACGVSEWYVVRVTLVSSFVLALFAGALTLVVAPWASEQEYRLEEKAKAESGLFSL 122 Query: 146 EENLFFRLDD-DLYIKISKYNPNNT-LQGIFIVDSRDTQTH---KIYYAQSGSID---LD 197 F + + + I N T L +F+ + + +I YAQ G ++ Sbjct: 123 RAGRFQQTGNEKAVVFIHDINQGGTELNKVFVAQFSENEKRPQARIVYAQHGIVEEGASG 182 Query: 198 RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNN 257 Q + L G+ + ISK++ + +F Y +Q + K + S LL N + Sbjct: 183 EQQLKLAAGKHYETDGISKELKVTEFSGYQVQIQEQAIEHQRRKLEAISSSALLQMNTAD 242 Query: 258 PNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFG 317 ++F RL L +I ++ +A + ++ K + ++ Sbjct: 243 AA----------AQFQWRLAIPLSILI---LTFIAVPLSEVNPRQGKFAKLVPAIVFYLI 289 Query: 318 VFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFLLMIKKKY 358 F + IE + + L+ I +L+I + Sbjct: 290 YFILLNGAKFAIEDGQIPVGLGLWWIHLTALFIGMLLILRGR 331 >gi|269103492|ref|ZP_06156189.1| putative permease [Photobacterium damselae subsp. damselae CIP 102761] gi|268163390|gb|EEZ41886.1| putative permease [Photobacterium damselae subsp. damselae CIP 102761] Length = 366 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 46/356 (12%), Positives = 121/356 (33%), Gaps = 21/356 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R +S + + + ++ + + + +++ + G +P++ Sbjct: 2 IIVRYLTRETLKSQFAVLFVLFLVFISQKFIRILADATDGSIPSDLITTLMGLYMPSMAL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG L++ L LA++ + + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGMGNKFLLRAALSLALITGALATFNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNN-TLQGIFIVDS-- 178 P Q+ + L + F + + ++ TL+ +F+ Sbjct: 122 PWAAEKEAQVMESVKADSGLDLLVKGQFQAAPNGQGVVFVNDITDKGKTLKHVFVAQLKG 181 Query: 179 RDTQTHKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 +D+ + A G + RQ + L DG + P D SI F+ Y Sbjct: 182 KDSIRPSVLVADHGYVSEHKDGRQILDLKDGTRYEGIPTRLDYSITDFEGYQAVIGQRKV 241 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + L+ ++EF R++ + + L+++V Sbjct: 242 KEERRDWDAMPTLELMQ----------RAEPEAQAEFQWRMSL-ILCI--PLLTMVVVPL 288 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 A+ ++ + + ++ I F S ++ P++ L+ + + + Sbjct: 289 SAVNPRQGRFAKLVPAVLIYLAYFLAIS-AGKSALEDGTLPPMIGLWSINLVILLI 343 >gi|268315816|ref|YP_003289535.1| permease YjgP/YjgQ family protein [Rhodothermus marinus DSM 4252] gi|262333350|gb|ACY47147.1| permease YjgP/YjgQ family protein [Rhodothermus marinus DSM 4252] Length = 481 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 44/241 (18%), Positives = 96/241 (39%), Gaps = 7/241 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK L + FL ++F+ + +++ + + L ++L++ Y + + Sbjct: 1 MKRLHRMTLGMLPGPFLGWFGTLMFLLIMQFLIKYLPDLVGKGLPLGVILELISYNLAYM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + + + +I + G S L P+L + ++L+ + N+ Sbjct: 61 VVLAVPMATLIAMIMTFGRLAESNAYQVIKSAGISLPQLTWPLLIVGLVLTGAMMYFNNL 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 I P+ + L Q L+ +F+ + I + +P +L+ + I D R Sbjct: 121 ILPEANHRARNLWIDIQRKKPGFQLQPGVFYDGIEGYSILVQHRDPETDSLRDVTIYDYR 180 Query: 180 DTQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSP--ISKDISIMKFKSYTLQTESA 233 ++ H + AQ G + +IL DGE HR + + F Y L+ + + Sbjct: 181 NSGEHAVLKAQRGLLQPIAGGRFIDLILEDGEFHRLRRLEGQERYERLAFARYRLRLDLS 240 Query: 234 N 234 + Sbjct: 241 D 241 Score = 38.8 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 13/108 (12%), Positives = 30/108 (27%) Query: 245 QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKK 304 + L + + + + YR E HK+ + + +IF LI + Sbjct: 340 RRLQTEIEDLQRSIQWTERRADRYRVEIHKKFSIAVACLIFVLIGMPLGLSVRRGGLGLA 399 Query: 305 IHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 + + + P+ L + + + L Sbjct: 400 GGLALAIFLFYWITLVQGEKLADRGYLTPWIGMWLPNLVMGLLGVALF 447 >gi|291279033|ref|YP_003495868.1| hypothetical protein DEFDS_0631 [Deferribacter desulfuricans SSM1] gi|290753735|dbj|BAI80112.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1] Length = 344 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 55/358 (15%), Positives = 129/358 (36%), Gaps = 16/358 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ E Y+L+ + FL+ LF +FI + +I+ L+ + + ++ IP+ Sbjct: 1 MRITEKYVLKELVPVFLVGNLFFIFILLIDKIVDLSELILAKNVPFFFVAELIIAYIPSF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + V ++ ++EL+ + + G + + KP + L + + + Sbjct: 61 LVITIPTSTLLSALIVYGRLSDDSELVAMKSLGADKYNIFKPSILLGFISLVLALLMSLY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + PK + + ++ + +EN + + K N G+ I++ +D Sbjct: 121 LMPKGNDFAIERLMQISKYVSINDFKENELYTEIPGFVLYTDKRVDKNKFLGLIIINKKD 180 Query: 181 TQTHKIYYAQSGSI-DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 H + A+ G I + +++ N + S ++FKS+ + Sbjct: 181 ---HIVIQAKKGEIVNTTEGSLVFNLDNGVLIDTKGEIPSKLEFKSFVVNVPIITEKKFD 237 Query: 240 LK-ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 ++ ++ L+N + + E KR +I + V + Sbjct: 238 VRNERLMSIRNLINHLNKS--------NIIKFELSKRFALPFASIIMAIFGAVV---GSF 286 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + K + +S+ I + I Y+ + I + L+ + Sbjct: 287 FHRGGKAFGLSVSIIIVLIYNTLLLLSQNLINMLNPYLAAWVANIIFIILLVYLLRRA 344 >gi|220906932|ref|YP_002482243.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 7425] gi|219863543|gb|ACL43882.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 7425] Length = 374 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 65/373 (17%), Positives = 139/373 (37%), Gaps = 21/373 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPT 59 + + YIL + FL +A + + + ++ + +L + L+I G +P Sbjct: 7 LAIIDRYILAEMAMPFLFGVAVFTLLAATIGVVFDLLRWLADNRLTLAVALQILGLRLPE 66 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + + P + V ++ R +EL+ + G S L P+L + LL+ F Sbjct: 67 FIILALPMSMLLTPLLVFNTLGRRSELVALQGCGVSVYRLALPILLVGFLLAGLTFGLNE 126 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLY----IKISKYNPNNTLQGIFI 175 I P+ Q+ A + E+N+F+R D +++ +Q I I Sbjct: 127 TIAPQTNYQALQIQTAALRRPQQKFREKNIFYREFVDNTLSRIFYARQFD-GQQMQRITI 185 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 ++ + +I A + D ++ G V+ +P ++ S + + + S Sbjct: 186 LNFDQGKLDQIIVANAAEWDQKQKHWDFQQGTVYSLTPNTESSSYTSIQPFQVTQLPLPS 245 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRP-------ELLETYRSEFHKRLTQWLFPVIFGLI 288 + + L + + +N R + + ++ ++ V+FGLI Sbjct: 246 TPLQLATETRKIEQ-MNRWEATQFLRAIEQTGDQKWIRRWKVGIQEKNAFPFTCVVFGLI 304 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 AA + + + +SL++ F + S I E P+L +L + Sbjct: 305 G--AALGLSSYNRSQTSRGFGLSLAMIFAYYLLNSTCISLGE-GGLLSPLLAAWLSPLVG 361 Query: 349 I----FLLMIKKK 357 + +LL + Sbjct: 362 LLTGGWLLFRAAR 374 >gi|167835784|ref|ZP_02462667.1| hypothetical protein Bpse38_04783 [Burkholderia thailandensis MSMB43] Length = 365 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 55/333 (16%), Positives = 125/333 (37%), Gaps = 18/333 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ I +++ + +S + +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTIMLTSMMIRIVGYAASGEVNPKDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M+ + VLT +++E+++ +G S LIKP+ A + I + + Sbjct: 62 MILVGTLFVSILFVLTRWYKDSEMVVWLASGVSLTRLIKPIGVFATPIVILIAFFAFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNN-TLQGIFIVDSRD 180 P K + A+ Q S L F + I K +P+ +Q +F+ + Sbjct: 122 PWSNQQSKLIKARFQQRDEVSLLAPGQFRESAANHRVFFIEKMSPDQAKVQNVFVTTTEQ 181 Query: 181 TQTHKIY--YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + + + ++ + I+L +G + P + IM+F+ Y ++ +S + Sbjct: 182 GKVNVVVSQTGHTETMKNGDRFIVLENGRRYDGVPGQPNFKIMEFERYGVKIQSKQIVSQ 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 L NP N +EF R L + +++I A Sbjct: 242 PTTTGTSTPDLLRNPTNQNL-----------AEFAWRAGLPLIAINLMILAIPLA---YQ 287 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ 331 +R + + +++ I + + ++E+ Sbjct: 288 NPRRGRTVNLVMAVLIYLTYSNLLNVVQSQMER 320 >gi|330962173|gb|EGH62433.1| hypothetical protein PMA4326_26812 [Pseudomonas syringae pv. maculicola str. ES4326] Length = 375 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 58/358 (16%), Positives = 127/358 (35%), Gaps = 29/358 (8%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ R + + ++ + ++ + +S +L I G+ +P L ++ Sbjct: 5 RYLSREVLLTLSAVSAVLLVFIMSGRFIKYLAQAASGALDPGVLFMIMGFRLPGFLQVIL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + + +E+ ++ TG S+ L+ + A L+ + + + P+ Sbjct: 65 PLGLFLGILMAYGRLYLESEMTVLAATGMSQQRLLAITMGPAALVGLVVAWLSFSLAPQG 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYNPNNT-LQGIFI------VD 177 + QL + F L F L D I + + + + L G+FI D Sbjct: 125 AAQFSQLINQQDAMTEFDTLVPGRFQALRDGTRITYTKELSDDRSQLTGVFISEKRMSSD 184 Query: 178 SRDTQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + A+ G ++ +IL +G + +P + D ++K+ +Y Sbjct: 185 KSKDNGITVLVAEKGHQEVQPNGSRFLILENGYRYDGNPGAADYRVIKYDTYGTALPKPE 244 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 S V S L +E R++ L I L++I Sbjct: 245 ISEEVTDREAIPTSELF----------GNRTARSVAELQWRISLPLSVFIVTLMAIP--L 292 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFL 351 R RQ + + L + ++ + I+ + + + L L ++ + +I+L Sbjct: 293 SRVNPRQGRYLK-----LLPAILLYMSYLAILISVRSSLEKGKLPLSLGMWWVHAIYL 345 >gi|47155054|emb|CAE85253.1| putative permease [Escherichia coli] Length = 227 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 55/221 (24%), Positives = 95/221 (42%), Gaps = 5/221 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 P + I QL ++Q L L F D+ I + + N L I + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIY-TS 179 Query: 180 DTQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKD 217 +I+ A+S + ++ ++L++G + +D Sbjct: 180 TANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRD 220 >gi|312170934|emb|CBX79193.1| Inner membrane protein yjgP [Erwinia amylovora ATCC BAA-2158] Length = 366 Score = 144 bits (363), Expect = 3e-32, Method: Composition-based stats. Identities = 50/336 (14%), Positives = 120/336 (35%), Gaps = 22/336 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGEIPTNLVLTLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G + L+K + L + ++ ++ + Sbjct: 62 LILPLSLFLAILMTLGRLYTESEITVMHACGLGKSVLVKAAMILMLFTALLAALNVGWLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+ + L F + D + + NT + +F+ R Sbjct: 122 PWSARYQNEVMQNAKANPGAAALAAGQFQQSADGQSVLFIENVKGNTFRNVFLAQLRPKG 181 Query: 183 T--HKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G + Q + L+ G + + +D I FK+Y + Sbjct: 182 NARPSVVVAEQGRMEQRVDGSQIVTLDSGTRFEGTALLRDFRITDFKNYQAIIGHQAVTL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + +L L + + +RSE H RLT +I L+ + Sbjct: 242 DPNDSEQMSLDTLWHSGKPD----------FRSELHWRLTLVFSVLIMALMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP 333 RQ + +S+ + ++ F + + + Sbjct: 290 NPRQGR-----VLSMLPAMLLYLVFFLLQSSLRSSG 320 >gi|170723397|ref|YP_001751085.1| permease YjgP/YjgQ family protein [Pseudomonas putida W619] gi|169761400|gb|ACA74716.1| permease YjgP/YjgQ family protein [Pseudomonas putida W619] Length = 371 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 50/318 (15%), Positives = 115/318 (36%), Gaps = 23/318 (7%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ R + + ++ I + ++ + + ++L I G+ +P L ++ Sbjct: 5 RYLSREVLVTLSAVSAVLLVIIMSGRFIKYLAQAAQGVLDPSVLFLIMGFRLPGFLQLIL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + + +E+ ++ TG S+ L+ + A L+++ + + P Sbjct: 65 PLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLLGLTMAPAALVALLVAWLSLSLAPLG 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNT-LQGIFIVDSR---- 179 + ++Q+ + F L F L D + + + L G+FI + R Sbjct: 125 VAQVQQIIGQQDALTEFDTLVPGRFQTLRDGSRVTYTEELTDDRSNLTGVFISEKRFNQD 184 Query: 180 --DTQTHKIYYAQSGS--IDLDRQ-AIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + + A+ G + D ++L +G + +P D +K+ +Y + Sbjct: 185 KTKDRAPSVLVAEKGHQEVQADGNRYLVLQNGYRYDGNPGQADYRAIKYDTYGVLLPKPE 244 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 S V + S L+ R+E R++ + I L+++ Sbjct: 245 VSEEVTEREAIPTSQLI----------GNAGLRERAELQWRISLPILVFIVTLLAVP--L 292 Query: 295 KRALVRQRKKIHPIFISL 312 R RQ + + + L Sbjct: 293 SRVNPRQGRFLKLLPAIL 310 >gi|149907704|ref|ZP_01896451.1| hypothetical protein PE36_07442 [Moritella sp. PE36] gi|149809374|gb|EDM69303.1| hypothetical protein PE36_07442 [Moritella sp. PE36] Length = 361 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 54/350 (15%), Positives = 129/350 (36%), Gaps = 20/350 (5%) Query: 17 LMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNV 76 + + I Q + ++ V + N+++++ Y +P + ++ P + Sbjct: 5 VAVLFILSLIFVSQQFVALLSKVMTGALPANLVMEMLLYTMPALGTLILPVSLFIGILFA 64 Query: 77 LTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKA 136 + +E++I+ G + ++ L L+ + + + I P QL Sbjct: 65 HGRLYAESEMVILTACGYTPSRILMSSLLLSSVTIGLVAFNAFIYAPTAEEGRVQLLENV 124 Query: 137 QLALTFSYLEENLFFRLDDDL-YIKISKYNPNNTLQGIFIVD--SRDTQTHKIYYAQSGS 193 + + L++ F LD L + + Y+ + +L+ IFI S++ + I A G+ Sbjct: 125 DADVGLATLKQGRFESLDGGLAVVYVESYDSDKSLRKIFIAKSPSQEGERPSIVLADKGN 184 Query: 194 IDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFL 250 ++ D + L+ G + +D I+ F Y + + + S K S L Sbjct: 185 VESDDNGSQWLKLSQGLRYEGELSQRDFRIVDFSEYRVFIQEQDVSERGRKTKALPTSEL 244 Query: 251 LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFI 310 N N ++ E R+ Q V L++++ + ++ + +F Sbjct: 245 WNSNE----------FEHKVELQWRIAQ---VVAIPLLTLLVVPLAMVNPRQGRYAKLFP 291 Query: 311 SLSISFGVFWGFSYIIHKI-EQNPYYIPILYLFLFCISSIFLLMIKKKYT 359 +L + F S I ++ + ++ + + + Y+ Sbjct: 292 ALLMFLTYFMLLSAARSAILDEKLPLVFGFWIVHLGVLILAIWFNLANYS 341 >gi|218885480|ref|YP_002434801.1| permease YjgP/YjgQ family protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756434|gb|ACL07333.1| permease YjgP/YjgQ family protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 379 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 48/342 (14%), Positives = 111/342 (32%), Gaps = 13/342 (3%) Query: 27 AWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTEL 86 + + LQ L L + + YL P + +V P + M+ + EL Sbjct: 16 VLIGRGLQLRELFLGLDLGLADAVLLFVYLTPFFMLLVVPVACMLSVFLTFLRMSTDREL 75 Query: 87 LIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLE 146 + + G S ++ L +L ++ + + + ++ Sbjct: 76 VALKAGGVSLYQMLAAPLLFCVLCTLLTLGISLQGLAWGMANFRATVMDIANSRARVVVQ 135 Query: 147 ENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQA----I 201 +F + L + + +P +N L + + D + A +G+I D Sbjct: 136 PGVFNKDIPGLTLFARQVDPADNRLSQVIVEDRSREDSTLTILAPTGAIATDEARGELLF 195 Query: 202 ILNDGEVHRKSPISKDISIMKFKSY----TLQTESANSSTIVLKANDQNLSFLLNPNPNN 257 L +G +++ + +S++ F Y L +K + + L ++ Sbjct: 196 RLQNGRLYKTE--GQQVSVLGFGEYVVRIDLGLMFKGLDLGRVKPKELSWEQLRALPLDD 253 Query: 258 --PNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSIS 315 N +LL E HKR ++ GL ++ A + ++ + + + Sbjct: 254 GKGNVDDKLLRKVAVEVHKRWVFPAACLVLGLFAMPLACAFEGLHRQFGVVLALLMFLVY 313 Query: 316 FGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + P LF + ++ L + + Sbjct: 314 YSLLSFGLTTGEAGTIAPEVGLWTPNVLFLGAGLWGLRLAAR 355 >gi|254247471|ref|ZP_04940792.1| hypothetical protein BCPG_02269 [Burkholderia cenocepacia PC184] gi|124872247|gb|EAY63963.1| hypothetical protein BCPG_02269 [Burkholderia cenocepacia PC184] Length = 364 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 60/366 (16%), Positives = 139/366 (37%), Gaps = 24/366 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ I +++ + +S +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTIMLTTMMIRIVGYAASGEIDPRDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT R++E+++ +G S LIKP+ A + + + + Sbjct: 62 VMLVVTLFVSILFVLTRRYRDSEMVVWLASGVSLTRLIKPIGVFATPIILLITFFAFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNT-LQGIFIVDSRD 180 P K + A+ Q S L F + I K +P+ + +Q +F+ + + Sbjct: 122 PWSNQQSKMIRARFQQRDEISLLAPGQFRESAANHRVFFIEKMSPDQSKVQNVFVTSTEN 181 Query: 181 TQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + +Q+G + + ++L DG + +P + IM+F+ Y ++ S + Sbjct: 182 GKV-NVVVSQTGHTETSKDGDRFVVLEDGRRYDGTPGQPNFKIMEFERYGVKITSKPVTN 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + L NP +N +EF R L + ++ I Sbjct: 241 VQTTNSTPTPDLLRNPTRDNL-----------AEFAWRAGLPLIAINLMVLGIP--LSYQ 287 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN----PYYIPILYLFLFCISSIFLLM 353 R+ + I+ + +++ I + + +IEQ + L++ + I + + Sbjct: 288 NPRRSRTIN-LVMAVLIYLTYSNLLNVVQAQIEQGKMSFGVGLVGLHVVVAAIVAFIFWL 346 Query: 354 IKKKYT 359 + Sbjct: 347 RVRNRP 352 >gi|257095656|ref|YP_003169297.1| permease YjgP/YjgQ family protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257048180|gb|ACV37368.1| permease YjgP/YjgQ family protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 359 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 50/318 (15%), Positives = 114/318 (35%), Gaps = 16/318 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ + R + + I Q+++ +N + + + + + G+ LP Sbjct: 2 IFQRAVRREFAHAASGIFTALFAIMVTTQLIRLLNEAAQGGVAPDAVAALLGFASLNYLP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + + L+ R++E+++ ++G I+PVL AI L + + Sbjct: 62 PLLSLSMFVAILLTLSRCYRDSEMVVWFSSGLPLTAWIRPVLVFAIPLVATIAALSFFLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFR-LDDDLYIKISKYNPN-NTLQGIFIVDSRD 180 P S + K + + F D + + + + ++ +F+ ++++ Sbjct: 122 PWAVSQSAEYRGKLSIRKDAGEVSPGTFHESSAGDRVVFVEGIAEDTSQVRNVFVSETKE 181 Query: 181 TQTHKI--YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + I+L DG + +P S ++ I+++ Y ++ E+ + I Sbjct: 182 GRVGVTMAVTGHQEIAANGDRFIVLQDGRRYELAPASPEVRILEYVRYAVRLETKEARGI 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 L LL P L YR+E RL+ V+ L++I Sbjct: 242 TPTPKSMPLRELL----------PVDLPAYRAELLWRLSIPCSAVVMALLAIP--LSFVN 289 Query: 299 VRQRKKIHPIFISLSISF 316 R + + + L Sbjct: 290 PRAGRSANMLLAILVYLI 307 >gi|291045045|ref|ZP_06570753.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|291011048|gb|EFE03045.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] Length = 384 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 46/365 (12%), Positives = 144/365 (39%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ +++ + + + + ++ + Q + + + +++ +L + G+ + + P Sbjct: 15 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTP 74 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I PV+ A+ +I + + + + Sbjct: 75 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWISPVMQFAVPFAILIAVMQLWVI 134 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLD--DDLYIKISKYN-PNNTLQGIFIVDSR 179 P ++ + + S +E F L + + ++ + ++ +F+ + Sbjct: 135 PWAELRSREYAEILKQKQELSLVEAGEFNNLGKRNGRVYFVETFDTESGIMKNLFLREQD 194 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE-SANSS 236 I +A+ G S++ +++ + L G + +P D + + F+ L + Sbjct: 195 KNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTTPKLI 254 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + + L+ +NP ++ +E R++ + L+ ++A Sbjct: 255 DPVSHRRTISTAQLIG--SSNPQHQ--------AELMWRISLTV---SVLLLCLLAVPLS 301 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP--YYIPILYLFLFCISSIFLLMI 354 + + I I++ + G + + +E +++ +L + + +L+ Sbjct: 302 YFNPRSGHTYNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFVIAIVLLR 361 Query: 355 KKKYT 359 + Sbjct: 362 VRSMP 366 >gi|206577932|ref|YP_002240777.1| putative permease [Klebsiella pneumoniae 342] gi|206566990|gb|ACI08766.1| putative permease [Klebsiella pneumoniae 342] Length = 365 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 56/357 (15%), Positives = 127/357 (35%), Gaps = 23/357 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G IP + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPTNLVLSLLGLGIPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ LIK + LA+ ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLIKAAMILALFTGAVAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + D + + N +F+ R Sbjct: 122 PWSSRHQDEVLAEAKANPGMAALAQGQFQQASDGNAVMFIESVNGNRFHDVFLAQLRPKG 181 Query: 183 T--HKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F +Y ++ Sbjct: 182 NARPSVVVADSGELSQQKDGSQVVTLNKGTRFEGTAMLRDFRITDFNNYQAIIGHQAVTS 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 ++ L + R+E H R T I L+ + Sbjct: 242 DPDDTEQMDMRTLWQ----------THTDRARAELHWRFTLVATVFIMALMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFLLM 353 RQ + +S+ + ++ F + I+ N + L ++++ I+ ++ + Sbjct: 290 NPRQGR-----VLSMLPAMLLYLVFFLLQTSIKSNGGKGKMDLAIWMWAINLLYFAL 341 >gi|240116444|ref|ZP_04730506.1| hypothetical protein NgonPID1_09463 [Neisseria gonorrhoeae PID18] gi|260441666|ref|ZP_05795482.1| hypothetical protein NgonDG_11382 [Neisseria gonorrhoeae DGI2] gi|268602116|ref|ZP_06136283.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18] gi|268586247|gb|EEZ50923.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18] Length = 371 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 46/365 (12%), Positives = 144/365 (39%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ +++ + + + + ++ + Q + + + +++ +L + G+ + + P Sbjct: 2 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I PV+ A+ +I + + + + Sbjct: 62 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWISPVMQFAVPFAILIAVMQLWVI 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLD--DDLYIKISKYN-PNNTLQGIFIVDSR 179 P ++ + + S +E F L + + ++ + ++ +F+ + Sbjct: 122 PWAELRSREYAEILKQKQELSLVEAGEFNNLGKRNGRVYFVETFDTESGIMKNLFLREQD 181 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE-SANSS 236 I +A+ G S++ +++ + L G + +P D + + F+ L + Sbjct: 182 KNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTTPKLI 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + + L+ +NP ++ +E R++ + L+ ++A Sbjct: 242 DPVSHRRTISTAQLIG--SSNPQHQ--------AELMWRISLTV---SVLLLCLLAVPLS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP--YYIPILYLFLFCISSIFLLMI 354 + + I I++ + G + + +E +++ +L + + +L+ Sbjct: 289 YFNPRSGHTYNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFVIAIVLLR 348 Query: 355 KKKYT 359 + Sbjct: 349 VRSMP 353 >gi|87198521|ref|YP_495778.1| permease YjgP/YjgQ [Novosphingobium aromaticivorans DSM 12444] gi|87134202|gb|ABD24944.1| permease YjgP/YjgQ [Novosphingobium aromaticivorans DSM 12444] Length = 414 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 57/371 (15%), Positives = 137/371 (36%), Gaps = 27/371 (7%) Query: 1 MKSF---ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLI 57 MK + YI R + L + + + ++L+ + V++ ++++ K+ L+ Sbjct: 1 MKLLTATDRYIARLVFVPMLSVFVLAASLLILDKMLKLFDFVATQGGPVSVVFKMLANLL 60 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 P + P + + ++EL ++ G S L++ AI L+ + Sbjct: 61 PEYASLAIPLGLMLGILFAFRKLAMSSELDVMRAVGLSYTRLLRVPYMFAIALAALNLLI 120 Query: 118 ENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS-KYNPNNTLQGIFIV 176 + ++P R +QL + + + + F L D +++ + L+GIF Sbjct: 121 VSYLQPLSRYYYEQLQFELRSGALGASIRVGEFNSLQDRTALRVDASRDEGRDLRGIFAR 180 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQA-----IILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 + A+ G +R++ + L DG++ + P ++ F S+ L + Sbjct: 181 IQTANGQVMVISAREGRFFANRESPDTVILRLTDGQIVQDGPGIASPRVLSFASHDLPID 240 Query: 232 SANSSTIVLK---ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 + + L LL N+ Y E+ ++ + RL + + + Sbjct: 241 LPRIEQFRQRGDADREYFLPELLQIGWND-RYSEEIRNQSKASLNYRLVE-----VVMMF 294 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP------ILYLF 342 + V ++ + + LSI V + +++ Q+ + L+ Sbjct: 295 LLPLLAVALAVPPKRSTSALGVFLSIVLVV---AYHKVNQYGQDVAALGRMDPVIALWGP 351 Query: 343 LFCISSIFLLM 353 +++ + M Sbjct: 352 FVVFAALIVWM 362 >gi|91774577|ref|YP_544333.1| permease YjgP/YjgQ [Methylobacillus flagellatus KT] gi|91708564|gb|ABE48492.1| permease YjgP/YjgQ [Methylobacillus flagellatus KT] Length = 361 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 48/360 (13%), Positives = 136/360 (37%), Gaps = 19/360 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ +L+ + + + L + I ++ I + + + + + + + G+ + LP Sbjct: 2 LFKRSLLQELVTTAIGGFLVLFGIVIAQRVAYYIGVAAKGSLASDAINTLLGFSMLKFLP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M+ + L+ +R++E+++ + G + I+PVL + + + + + + Sbjct: 62 MMLSLTLFLAVLLTLSRWHRDSEMVVWFSAGQGLSSWIRPVLTFGLPVIVVIALLSLFVT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIKISKYNP-NNTLQGIFIVDSRD 180 P + + + + + +F D + ++ N ++ IF+ + Sbjct: 122 PWATGKGAEFRDQLKSRDELASISPGVFKESRHADRVFFVESFDELGNIVKNIFVQSMQH 181 Query: 181 TQTHKIYYAQ--SGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + I A+ + + +++ +G + +P + + SI +F+ Y ++ E A Sbjct: 182 QKLGIIVAARGHRETAENGDDFLVMQNGRRYEGTPNTAEYSITEFERYAIRIEPAEVQQQ 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 +N L N + + +E RL + + L++I + Sbjct: 242 PPNTQSKNSLELFNEHSPDS----------IAELQWRLAIPISAFVLILLAI---PLSFV 288 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN--PYYIPILYLFLFCISSIFLLMIKK 356 + + + ++L I S + + Q P + + + F + F + ++ Sbjct: 289 DPRSGRSANLMMALLIYIVYNNLLSIMQAWLSQGKVPAMVGLWPVHAFFLLLTFWMFYRR 348 >gi|293393093|ref|ZP_06637408.1| inner membrane protein YjgP [Serratia odorifera DSM 4582] gi|291424239|gb|EFE97453.1| inner membrane protein YjgP [Serratia odorifera DSM 4582] Length = 393 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 56/356 (15%), Positives = 131/356 (36%), Gaps = 19/356 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + +++ + N++L + +P + Sbjct: 31 IIIRYLVRETLKSQIAILFILLLIFFCQNLVRVLGDAVDGDVPTNLVLSLLALGVPKMAQ 90 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G + TLI + LA+L S+ + I Sbjct: 91 LILPLSLFLGLLMTLGRLYTESEITVMHACGLGKRTLIIAAMVLALLTSLVAAANVFWIG 150 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P S ++ A+A+ + + L E F D + NT +F+ R Sbjct: 151 PWASSHQDEVIAEAKANPSIAGLAEGQFQPSQDGNAVLFVGNVKGNTFNNVFLAQLRPNG 210 Query: 183 T--HKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G I+ Q + L+ G + + +D I F Y + Sbjct: 211 NQRPSVVVAEHGQINQMKDGSQVVTLDKGTRFEGTALLRDFRITDFSDYKAVVGHRAVAM 270 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +A ++ L + + R+EFH RLT V L++++ Sbjct: 271 DNTQAEQMSMLTLWQSDD----------QEARAEFHWRLT---LVVSVVLMALLVVPLSV 317 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + ++ ++ + ++ + F + + + P+L+++L + + Sbjct: 318 VNPRQGRVLSMLPAILLYLIFFLLQTSLRSNAGK-GKLDPMLWIWLVNAVYFAIAL 372 >gi|302879722|ref|YP_003848286.1| permease YjgP/YjgQ family protein [Gallionella capsiferriformans ES-2] gi|302582511|gb|ADL56522.1| permease YjgP/YjgQ family protein [Gallionella capsiferriformans ES-2] Length = 377 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 54/364 (14%), Positives = 134/364 (36%), Gaps = 32/364 (8%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + F+ ++ + ++ ++ I + Q+++ + S +++ +L + G+ L Sbjct: 18 RQFQRALVLEFAGNGVLVFAILLGIVVISQLIRFLGEAVSGKLAVDGVLALLGFSALNYL 77 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 ++ + L+ R++E+++ + G I+PV A + + + ++ Sbjct: 78 SVLLSMSLFIAILLTLSRCYRDSEMVVWFSAGIGLTRWIRPVALFAAPVVTVIALLSLVL 137 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLD--DDLYIKISKYNPNNTLQGIFIVDSR 179 P A+ + + L +F D +Y + N + IF+ + Sbjct: 138 SPWAMKRADDFKAQLESRDELATLTPGVFRESGQSDRVYFVETVDVGNGRIGNIFVRSVQ 197 Query: 180 DTQTHKIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 ++Q A+ G ++ + ++L +G + +P +D I++F+ Y ++ ESA S Sbjct: 198 NSQMG-TMVAREGLQQTMPNGDRFLVLLNGTRYEGTPGERDYRIVEFERYAMRIESAASK 256 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 ++ + L SE RL + + L++I Sbjct: 257 QLLPNVRTLSTLELW----------RNPTRWNLSELEWRLGLPISAAVLSLLAIS--LSY 304 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIH---------KIEQNPYYIPILYLFLFCIS 347 R + ++ L ++ ++ +S +I K+ I L L + Sbjct: 305 VNPRAGRSLN-----LVLAMVLYMLYSNMISVTNAWVGQGKLSPGIGLWGIHALMLLITA 359 Query: 348 SIFL 351 F Sbjct: 360 LFFY 363 >gi|226227978|ref|YP_002762084.1| hypothetical protein GAU_2572 [Gemmatimonas aurantiaca T-27] gi|226091169|dbj|BAH39614.1| hypothetical protein [Gemmatimonas aurantiaca T-27] Length = 578 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 44/282 (15%), Positives = 94/282 (33%), Gaps = 12/282 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y++R + + + + + + +++ ++ + + + +P Sbjct: 1 MKLLTRYVIREHIGPLVFALSALTSLLMLQYVARQLANLAGKGLPWSAIGQFFVLSLPFT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + T M E+ +G T++ PVLF A+LLS+F+ + Sbjct: 61 VAMTLPMAVLVATLYAFGRMAAEHEITAFKASGVRVRTMMLPVLFCALLLSLFMVWFNDQ 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 + P + L L + + D ++++++ + N + + I D Sbjct: 121 VLPAANHRLSMLQRDIARTKPTLALRDQALNAITDQFFMRVARTDAETNRMYDVVIYDLS 180 Query: 180 DTQTHKIYYAQSGSIDLDRQ----AIILNDGEVHRKSPISKD-ISIMKFKSYTLQT---- 230 Q K YA SG + L DG F+S ++ Sbjct: 181 RGQERKTIYADSGVFAPAPNNRDLQLTLYDGFAQEFVRGDPRQFQRSYFQSQVIRQAGMT 240 Query: 231 --ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRS 270 A++S + + L + + Y S Sbjct: 241 QGFEASNSDGYKGDREMTVCELHRKYIADAVEVERVRLEYVS 282 Score = 39.9 bits (92), Expect = 0.58, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 33/99 (33%) Query: 261 RPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFW 320 + E L++ E HK+ ++F L A + I I + + Sbjct: 445 QREGLDSLAVEIHKKFALSFACLVFVLFGPPIALRFPRGGVGVTIGVSIIVFGLYYVCLM 504 Query: 321 GFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYT 359 G + K Y + +F + ++ +L + T Sbjct: 505 GGEALADKGRLPAYVAMWIANVIFTLVALVMLWRVESTT 543 >gi|325134627|gb|EGC57267.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M13399] Length = 371 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 45/365 (12%), Positives = 145/365 (39%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ +++ + + + + ++ + Q + + + +++ +L + G+ + + P Sbjct: 2 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ ++ + + + + Sbjct: 62 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWVI 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLD--DDLYIKISKYN-PNNTLQGIFIVDSR 179 P ++ + + S +E F L + + ++ + ++ +F+ + Sbjct: 122 PWAELRSREYAEILKQKQELSLVEAGGFNSLGKRNGRVYFVETFDTESGIMKNLFLREQD 181 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE-SANSS 236 I +A+ G S++ +++ + L G + +P D + + F+ L + Sbjct: 182 KNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTTPKLI 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + L+ +NP ++ +E R++ + L+ ++A Sbjct: 242 DPVSHRRTIPTAQLIG--SSNPQHQ--------AELMWRISLTV---SVLLLCLLAVPLS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP--YYIPILYLFLFCISSIFLLMI 354 + + I I++ + G + + +E +++ +L + + + +L+ Sbjct: 289 YFNPRSGHTYNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFAVALILLR 348 Query: 355 KKKYT 359 + Sbjct: 349 VRSMP 353 >gi|228472915|ref|ZP_04057672.1| permease [Capnocytophaga gingivalis ATCC 33624] gi|228275497|gb|EEK14274.1| permease [Capnocytophaga gingivalis ATCC 33624] Length = 477 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 60/296 (20%), Positives = 122/296 (41%), Gaps = 22/296 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL +F+ S L I+ I I ++ + S +++K ++P + Sbjct: 1 MKILDRYILSRFIFNFISSFLIIMVIFIFQTIWLYVDELVGRGLSFLVVIKFIALMLPNL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P++ P + + L + + EL + +G S + + ++ +LLSI +F + N Sbjct: 61 IPLILPLTVVLSSIMTLGAFGESYELAAMKASGVSLLKATRMLILFMVLLSIGVFFTFNN 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT--LQGIFIVD- 177 ++P L + + + +F + D IK++K N L I I Sbjct: 121 LQPWSNRKFVALRDSIKNKQPSLAISQGIFNNVQD-FSIKVAKKTGENEQYLHDIVIHKV 179 Query: 178 SRDTQTHKIYYAQSGSIDLDRQA-----IILNDGEVHR-----KSPISKDISIMKFKSYT 227 + T + A++G + ++ +IL DG + KS I+ KF+++ Sbjct: 180 GINGDTRTVIKAKNGELSGHKKGSDVLQLILKDGSYYEDVYNDKSDITFPFVKAKFETHV 239 Query: 228 LQTE-SANSSTIVLKAN-------DQNLSFLLNPNPNNPNYRPELLETYRSEFHKR 275 L + SA ++ I N N+S L + + + + + F++R Sbjct: 240 LNIDISALNADITYDENAERDYYKTMNISQLSHALDSIVQNYQQETKDFGENFYRR 295 Score = 39.9 bits (92), Expect = 0.53, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 46/112 (41%), Gaps = 6/112 (5%) Query: 246 NLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKI 305 +L L+ N +N Y+ +L+ YR ++ + + VAA A++R+ Sbjct: 344 SLVNSLDNNKDNVEYQQKLINVYRLTLSDKIALAITCFVLF---FVAAPLGAIIRKGGIG 400 Query: 306 HPIFISLSISFGVFWGFSYIIHKIEQ---NPYYIPILYLFLFCISSIFLLMI 354 P+ +++ + ++ + NPY P + F ++L ++ Sbjct: 401 MPLVVAIGLFLSYYFSGLLTKNMATNGNINPYIAPWVPTFFLLPLGVYLTIL 452 >gi|326561253|gb|EGE11612.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis 46P47B1] Length = 437 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 44/293 (15%), Positives = 109/293 (37%), Gaps = 19/293 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + + F+V I ++++ + + ++ +L ++ GY P L Sbjct: 57 ILRRYMTTQVASTTALVLGFLVVILLGGRLIRYFGMAAEGGLNVGVLFRLIGYNFPYFLE 116 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + V + + E+ +++ +G SR + + ++ L ++L + + Sbjct: 117 LILPLSFFIGLMLVFGRLYTDHEMTVMNASGISRGRVARLLMPLVVVLMCIEGWVSMVAK 176 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIF------- 174 P + + +A F + F DD ++ + + N L+ + Sbjct: 177 PWGMERATNIWQEQSVAQVFDLIRPQEFIS-SDDYHLYVGEMGANREFLKDVIIIQMHTA 235 Query: 175 ----IVDSRDTQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYT 227 I + Q I +A+S + + L G + P S+ S + F+ Y Sbjct: 236 EPSDIQSRQSHQRDSIIFAKSATHVETGNGQIQLDLQQGRRYEVDPTSRQYSQIGFERYR 295 Query: 228 LQTE-SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQW 279 + T ++ + + LL + + + + + +E RL+ Sbjct: 296 MTLSVKPPEGTSHIRIEGVSTTELL--SIIQGHSKRDNPQEAYAELGYRLSMP 346 >gi|255320991|ref|ZP_05362164.1| permease YjgP/YjgQ family protein [Acinetobacter radioresistens SK82] gi|262379919|ref|ZP_06073074.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] gi|255301955|gb|EET81199.1| permease YjgP/YjgQ family protein [Acinetobacter radioresistens SK82] gi|262298113|gb|EEY86027.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] Length = 366 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 56/362 (15%), Positives = 130/362 (35%), Gaps = 19/362 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + + L+ + I ++++ + + +ILL I GY +P L Sbjct: 2 IIRRYLVKQVVSTSLVVIALLTLIMMGGRLIKYFGVAAQGRLDASILLSIIGYRLPEFLT 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + V + + E+ +++ +G SR L + ++ L ++ + I + Sbjct: 62 LILPLGFFIGLMLVFGRLYVDHEMAVLNGSGISRNRLARLLIPLTLVYMLVQSILMLWMS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSRDT 181 P +QL+ + F + F I + ++ L+ IF + Sbjct: 122 PWGIRQFEQLTTSQAVRTGFDLVRPKEFISSGP-YTIYAGSLSEDHKNLKEIFFYQRAEK 180 Query: 182 --QTHKIYYAQSGS----IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + + A+ + +D + L G + P S +F+SY L+ E+ + Sbjct: 181 PGKPDVMILAKEATRVEMMDDSANVVDLVQGRRYEIYPGQPRYSQAEFESYRLRLENDKT 240 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + + L +P SE R+ ++ ++++ Sbjct: 241 ANFESDDVAALTTSKLWEQRADPVVE--------SELGWRIFVPFAIMVALILAMA--LS 290 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 RQ + + +F +L I + I + ++ I L + L + Sbjct: 291 EVSPRQGRYMK-LFPALLIFASLIVALMAIKTRASKDEIGIWAYPAVLLVYAVAGALFSR 349 Query: 356 KK 357 K+ Sbjct: 350 KQ 351 >gi|218768538|ref|YP_002343050.1| conserved integral membrane hypothetical protein [Neisseria meningitidis Z2491] gi|121052546|emb|CAM08886.1| conserved integral membrane hypothetical protein [Neisseria meningitidis Z2491] gi|308389704|gb|ADO32024.1| hypothetical protein NMBB_1799 [Neisseria meningitidis alpha710] gi|319410787|emb|CBY91172.1| conserved hypothetical integral membrane protein [Neisseria meningitidis WUE 2594] gi|325128631|gb|EGC51500.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis N1568] gi|325130631|gb|EGC53374.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis OX99.30304] gi|325144870|gb|EGC67158.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M01-240013] gi|325201754|gb|ADY97208.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M01-240149] gi|325204534|gb|ADY99987.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M01-240355] gi|325205695|gb|ADZ01148.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M04-240196] Length = 371 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 45/365 (12%), Positives = 144/365 (39%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ +++ + + + + ++ + Q + + + +++ +L + G+ + + P Sbjct: 2 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ ++ + + + + Sbjct: 62 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWVI 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLD--DDLYIKISKYN-PNNTLQGIFIVDSR 179 P ++ + + S +E F L + + ++ + ++ +F+ + Sbjct: 122 PWAELRSREYAEILKQKQELSLVEAGGFNSLGKRNGRVYFVETFDTESGIMKNLFLREQD 181 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE-SANSS 236 I +A+ G S++ +++ + L G + +P D + + F+ L + Sbjct: 182 KNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTTPKLI 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + L+ +NP ++ +E R++ + L+ ++A Sbjct: 242 DPVSHRRTIPTAQLIG--SSNPQHQ--------AELMWRISLTV---SVLLLCLLAVPLS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP--YYIPILYLFLFCISSIFLLMI 354 + + I I++ + G + + +E +++ +L + + +L+ Sbjct: 289 YFNPRSGHTYNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFVIAIVLLR 348 Query: 355 KKKYT 359 + Sbjct: 349 VRSMP 353 >gi|78486088|ref|YP_392013.1| permease YjgP/YjgQ [Thiomicrospira crunogena XCL-2] gi|78364374|gb|ABB42339.1| YjgP/YjgQ family protein [Thiomicrospira crunogena XCL-2] Length = 369 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 43/358 (12%), Positives = 126/358 (35%), Gaps = 22/358 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + Y+ + + +F ++ I + + + + + +++++ Y IP Sbjct: 1 MRILDKYLYKELFATFFAVLSVLLLITFGTEATKLLAVAVEGAIPSTVIMQVLLYKIPPA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + + + ++ E++++ + G + K V + + L+ + Sbjct: 61 LEVILPLVALLSVMLAVGRLYQDQEMVVLQSCGIATSFFQKRVFWFLVPLAFLTAWVSLV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNNTLQGIFIVDSR 179 + P ++L +AQ + L F L + N L+ +++ + Sbjct: 121 VTPWSYEQERKLIMEAQTTSPLAALVPGKFNPLPNGEGIFYTRSIKSNGDLESVWVRLNT 180 Query: 180 DTQTHKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 D + + A G + + ++L +G + D ++ +F + S++ Sbjct: 181 D-ERDILLMAPKGKFEWINGKLVLVLLNGRSYEGLKKGDDFTVREFDRFEGFLPEIQSTS 239 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQW--LFPVIFGLISIVAADK 295 + + S L + H+ L QW + P ++ ++ Sbjct: 240 TAQQVFEIPTSTLWQSDKPE---------------HEALLQWRIVTPFSILVLGLLGLKM 284 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + + +F +L + + ++ + N P + L+ + + + Sbjct: 285 SKSGPREGRFAKVFFAL-VLYVIYNQLLVTFRESISNEALSPWVGLWPIPVVFLMYAL 341 >gi|300866498|ref|ZP_07111188.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506] gi|300335455|emb|CBN56348.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506] Length = 369 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 47/355 (13%), Positives = 137/355 (38%), Gaps = 21/355 (5%) Query: 5 ELYILRCIGRSFLMSCLFIVFIAWVIQIL-QRINLVSSSTESLNILLKISGYLIPTVLPM 63 + Y+ + + FL + + + + + V+ S + ++I +P + + Sbjct: 2 DWYLTKELIGPFLFGVGLFSSVGVTVGAVFELVRRVTESGLPFSTAIQIFLLKMPYFIVL 61 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + + + M+ ++E++ + + G + L+ P + L++ ++ F +I P Sbjct: 62 AFPMSMLLASLMAYSRMSSDSEIVALRSCGINVYRLVVPAVILSLAVTGMTFAMNELIVP 121 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL------------YIKISKYNPNNTLQ 171 +A + E+N+F+ ++ +++ ++ Sbjct: 122 AANYQATVTLDRALKREKPLFQEKNIFYPEFRNVDKGNGEESVLTRLFYAEQFD-GKQMK 180 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT- 230 G+ I+D + ++I ++S + + + +G V+ +P +I++F+ LQ Sbjct: 181 GLTILDRSQPELNQIISSESAIWNPAQNSWDFFNGTVYIVAPDGSYRNIVRFEHQQLQLP 240 Query: 231 -ESANSSTIVLKANDQNLSFLLN-PNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 + + + N++ ++ N + + + + ++ ++FGL+ Sbjct: 241 RTPLDLAAKARDYGEMNIAQAIDYLNLIRSSGDEQKIRKLKVRIQEKYALPFVCIVFGLV 300 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 K ++ + IS+ + F + FS+I + P++ +L Sbjct: 301 GAALGTKP---QRTGRATSFGISVIVIFTYYV-FSFITSSMGLKAILTPVMAAWL 351 >gi|256823038|ref|YP_003147001.1| permease YjgP/YjgQ family protein [Kangiella koreensis DSM 16069] gi|256796577|gb|ACV27233.1| permease YjgP/YjgQ family protein [Kangiella koreensis DSM 16069] Length = 370 Score = 143 bits (360), Expect = 6e-32, Method: Composition-based stats. Identities = 58/370 (15%), Positives = 124/370 (33%), Gaps = 25/370 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + S + I +I++ + ++ S +++ ++ G P ++ Sbjct: 2 ILSRYLNREVLTSTTAILGVLFAIFMSQRIVKYLAQAAAGDISGSMVWQMVGLYSPILIG 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P F + + + ++E+ ++ + G S LI+ + A+ +++ + Sbjct: 62 FLLPLAFFLGCLLAFSRLYVDSEMAVLRSVGVSERFLIRMLAPAALFIAVVGGAVTLWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNNTLQGIFIVDSRDT 181 P+ Q+ + L S L F + + L F+ + Sbjct: 122 PQANELTYQIRDEHASKLELSMLTPGHFQMFQQGQGVVYADSSERSTKLGNFFLAEMPSE 181 Query: 182 QTHKI--YYAQSGSI----DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 AQS LD+ + LNDG V+ + + +F+ Y + ++ S Sbjct: 182 MNPNTRIISAQSAERFYDESLDKNFLQLNDGHVYELDGNQQVSKVTRFERYFARLDAERS 241 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 K + + LL +EFH RL P+ L +A Sbjct: 242 IVSRRKISATSTPELL----------ASGDGASWAEFHWRLAV---PISVPLFMFLAIPL 288 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-----PYYIPILYLFLFCISSIF 350 + + K + +L + G +E +IPI + F + + Sbjct: 289 SRVRPREGKFAKMLPALMVYIGYIVLIVVFRRALESEQIPGWLGFIPIYLVMAFLAARLL 348 Query: 351 LLMIKKKYTK 360 L + K Sbjct: 349 YLHGRSNSPK 358 >gi|323525104|ref|YP_004227257.1| permease YjgP/YjgQ family protein [Burkholderia sp. CCGE1001] gi|323382106|gb|ADX54197.1| permease YjgP/YjgQ family protein [Burkholderia sp. CCGE1001] Length = 365 Score = 143 bits (360), Expect = 6e-32, Method: Composition-based stats. Identities = 60/363 (16%), Positives = 132/363 (36%), Gaps = 18/363 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ + +++ + + +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTLVLTTMMIRIVGFAAQGEIDPRDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT +++E+++ ++G S IKP+ A + I + + Sbjct: 62 IMLVATLFVSILFVLTRWYKDSEMVVWLSSGVSLTQFIKPIGMFATPIVILIMFFVFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIKISKYNPN-NTLQGIFIVDSRD 180 P K + A+ Q S L F I K +P+ ++ +F+ + + Sbjct: 122 PWSNQQSKLIRARFQQRDEVSLLAPGQFRESASTHRVFFIEKMSPDQGHVENVFVTSTEN 181 Query: 181 TQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + +++G + + ++L +G + P D IM+F+ Y ++ ES Sbjct: 182 GKV-NVVVSKNGHTETHKNGDRFVVLENGRRYEGEPGHPDFRIMEFERYGVKIESQPVVN 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA-DKR 296 L+ L NP N +EF R L + L++I A Sbjct: 241 TPTTTGTPTLTLLRNPTNENL-----------AEFAWRAGLPLIAINLMLLAIPLAHQNP 289 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R + + I L+ S + S+I + IL++ + I + + + Sbjct: 290 RRSRTINLVMAVLIYLTYSNLLNVVQSWIEQGKMSFGVGLVILHVIVAGIVAFIFWLRVR 349 Query: 357 KYT 359 Sbjct: 350 NRP 352 >gi|162148704|ref|YP_001603165.1| permease [Gluconacetobacter diazotrophicus PAl 5] gi|161787281|emb|CAP56875.1| putative permease [Gluconacetobacter diazotrophicus PAl 5] Length = 402 Score = 143 bits (360), Expect = 6e-32, Method: Composition-based stats. Identities = 57/362 (15%), Positives = 135/362 (37%), Gaps = 9/362 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + Y++ + FL+S ++ + ++L +N+++S +L I + L+P L Sbjct: 17 GTLDRYLIGQMLPPFLLSLGVVMTALLLERLLTLLNVLASDGGTLKIFAGLLADLVPHYL 76 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + +V+ M++N E+ + +G S + + +P + + +L + F I Sbjct: 77 GLALPAAICVSVFSVVRRMSQNNEIDALMASGVSLLRIARPFVVMGAVLGLVGFSLYGFI 136 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSRD 180 +P R +Q A A +L+ +F D L + + T L+ +FI D Sbjct: 137 QPYARYDFRQALYIASHAGWTPHLQARMFAAPSDTLMLTADQVQGAGTRLRRVFIRDKS- 195 Query: 181 TQTHKIYYAQSGSIDLDRQA----IILNDGEV-HRKSPISKDISIMKFKSYTLQTESANS 235 + A SG + + + L G + ++ ++ + QT S Sbjct: 196 AGLERDITADSGRLLMTDDGTTVRLDLAHGVIVTDRNDDRPTLTTFDTTTRFFQTSSKAH 255 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + +++ L+ L + +E H RL + + +++ A Sbjct: 256 AFRNRGNDERELTVLELRHGIRHRDLAIRRTHLVAELHFRLARAMAIPFIPILACALAGM 315 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 RQR ++S+ + ++ +++ + +I Sbjct: 316 AK--RQRHNTGLAIAAISLVGFDHALQLGLSLVASRSMSPWLVIWGPFAVFGFACVWLIL 373 Query: 356 KK 357 ++ Sbjct: 374 RR 375 >gi|209545529|ref|YP_002277758.1| permease YjgP/YjgQ family protein [Gluconacetobacter diazotrophicus PAl 5] gi|209533206|gb|ACI53143.1| permease YjgP/YjgQ family protein [Gluconacetobacter diazotrophicus PAl 5] Length = 402 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 57/362 (15%), Positives = 135/362 (37%), Gaps = 9/362 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + Y++ + FL+S ++ + ++L +N+++S +L I + L+P L Sbjct: 17 GTLDRYLIGQMLPPFLLSLGVVMTALLLERLLTLLNVLASDGGTLKIFAGLLADLVPHYL 76 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + +V+ M++N E+ + +G S + + +P + + +L + F I Sbjct: 77 GLALPAAICVSVFSVVRRMSQNNEIDALMASGVSLLRIARPFVVMGAVLGLVGFSLYGFI 136 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSRD 180 +P R +Q A A +L+ +F D L + + T L+ +FI D Sbjct: 137 QPYARYDFRQALYIASHAGWTPHLQARMFAAPSDTLMLTADQVQGAGTRLRRVFIRDKS- 195 Query: 181 TQTHKIYYAQSGSIDLDRQA----IILNDGEV-HRKSPISKDISIMKFKSYTLQTESANS 235 + A SG + + + L G + ++ ++ + QT S Sbjct: 196 AGLERDITADSGRLLMTDDGTTVRLDLAHGVIVTDRNDGRPTLTTFDTTTRFFQTSSKAH 255 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + +++ L+ L + +E H RL + + +++ A Sbjct: 256 AFRNRGNDERELTVLELRHGIRHRDLAIRRTHLVAELHFRLARAMAIPFIPILACALAGM 315 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 RQR ++S+ + ++ +++ + +I Sbjct: 316 AK--RQRHNTGLAIAAISLVGFDHALQLGLSLVASRSMSPWLVIWGPFAVFGFACVWLIL 373 Query: 356 KK 357 ++ Sbjct: 374 RR 375 >gi|269792897|ref|YP_003317801.1| permease YjgP/YjgQ family protein [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100532|gb|ACZ19519.1| permease YjgP/YjgQ family protein [Thermanaerovibrio acidaminovorans DSM 6589] Length = 356 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 50/359 (13%), Positives = 123/359 (34%), Gaps = 14/359 (3%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRI-NLVSSSTESLNILLKISGYLIPTVLPMVTP 66 IL + F + +L RI +LV SL +++++ Y +P V+ P Sbjct: 2 ILMELLGPFAFGVAAFTVLMVAGSLLFRIADLVIQRGVSLGVVVRLFLYYLPGVVVTTIP 61 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + ++ ++E++ + G +++P++ + L S+ F+ + P Sbjct: 62 MGSLLGALMGFGKLSSHSEIVALKACGVPFRRMVRPLVVASALASVVTFVLNETVVPLSE 121 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDD----DLYIKISKYNP-NNTLQGIFIVDSRDT 181 + + A + +E +F R + I + + P ++G+ + + Sbjct: 122 RAARNVLAYEIMRERPPEFKERMFLREEGSSGLRRVIYMDRIRPRTGEMEGVLVQEFEGG 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKF--KSYTLQTESANSSTIV 239 + ++ A+ + + +G+ +P + F +S L A Sbjct: 182 RLSRLTSARRAVWRDGK--WTMEEGKTFEVAPDGGVKFLYSFARESLRLDLSPARVEAQS 239 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + ++ + + R FH RL ++ L+ A + Sbjct: 240 TDPSQMSVFQ-MAEQIGLMERQGSDATKLRVMFHLRLAVPWASLVLALVGASAGVRPQ-- 296 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-PYYIPILYLFLFCISSIFLLMIKKK 357 R + +S+ I F + S+ E + + ++ L M+++ Sbjct: 297 RSGGAGVGLGLSVVIVFLYYVVLSFCQSLGEASYLPPVVAAWVPNLVFGVAGLFMVRRG 355 >gi|254360524|ref|ZP_04976673.1| possible inner membrane protein [Mannheimia haemolytica PHL213] gi|261492350|ref|ZP_05988912.1| putative inner membrane protein [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496136|ref|ZP_05992544.1| putative inner membrane protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|153091064|gb|EDN73069.1| possible inner membrane protein [Mannheimia haemolytica PHL213] gi|261308238|gb|EEY09533.1| putative inner membrane protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312033|gb|EEY13174.1| putative inner membrane protein [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 369 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 54/356 (15%), Positives = 127/356 (35%), Gaps = 19/356 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + I +S L ++ I + Q+++ ++ S ++++ + G +PT+ Sbjct: 2 ILSRYLTKEIFKSQLAILFILLLIFFCQQLVRVLSSAVSGKVPADLVVSLLGLGMPTMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L +E+ ++ G + L+K +FL+I + + + Sbjct: 62 LMLPLSLFIALLLTLGRFYAESEITVMRACGIGQGLLVKVAMFLSIFTTALAVYNVFWLT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV--DSRD 180 P + ++ A+A+ F+ L F + I K NN+L I++ + + Sbjct: 122 PWAINKQSEMLAEAKANPRFAALSAGQFMS-AGGYVLFIDKIE-NNSLNDIYVFQPEQQK 179 Query: 181 TQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+SG++ Q + L + + +P S D I F++Y+ + + Sbjct: 180 KNKPSVVVAESGTLQGLPNGDQVLTLAESKRFEGTPQSADFRISHFENYSAYLGYQDVES 239 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L+ ++E H RL L + L+++ Sbjct: 240 DEKLVQRADFKKLM----------ETKTPEAKAELHWRLALILAVPLMALLAVP--MSSV 287 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 RQ + + L S ++ L + +++ Sbjct: 288 NPRQGRFAKLLPALLLYLIYFLLQSSLKSSGASGKLNAEVLMPLVSVAFLVLGVIL 343 >gi|291616051|ref|YP_003518793.1| YjgP [Pantoea ananatis LMG 20103] gi|291151081|gb|ADD75665.1| YjgP [Pantoea ananatis LMG 20103] Length = 366 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 52/364 (14%), Positives = 133/364 (36%), Gaps = 25/364 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGEVPTNLVLTLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + L + S+ ++ + Sbjct: 62 LILPLSLFLAILMTLGRLYTESEITVMHACGLSKAVLVKAAMVLMLFTSVVAAVNVIWLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +Q++ A+ + L F D + + N +F+ R Sbjct: 122 PWSSRYQEQVTQNAKANPGAAALAAGQFQTSSDGSAVLFLENVKGNQFGHVFLAQLRPKG 181 Query: 183 T--HKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG ++ + + L+ G + + +D I F +Y ++ Sbjct: 182 NARPSVVLADSGHMEQKKDGSQIVTLDKGTRFEGTALLRDFRITDFTNYQAYVGYKQATL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + LL+ +R+E H R+T ++ L+ + Sbjct: 242 DPNDVDQATFATLLS----------NKTPEFRAELHWRITLVFAVLVMALMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFLFCISSIFLLMI 354 RQ + +S+ + ++ F + + + P +++++ IS + L ++ Sbjct: 290 NPRQGR-----VLSMLPAMLLYLIFFLLQSSLRSSGAKGRLDPAIWMWVVNISYLALAIV 344 Query: 355 KKKY 358 + Sbjct: 345 LNLW 348 >gi|188532528|ref|YP_001906325.1| Putative permease [Erwinia tasmaniensis Et1/99] gi|188027570|emb|CAO95417.1| Putative permease [Erwinia tasmaniensis Et1/99] Length = 366 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 51/361 (14%), Positives = 129/361 (35%), Gaps = 19/361 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGEIPTNLVLTLLGLGVPQMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G + L+K + L + ++ ++ + Sbjct: 62 LILPLSLFLAILMTLGRLYAESEITVMHACGLGKSVLVKAAMILMLFTALLAAVNVGWLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+ + L F + D + + +T +F+ R Sbjct: 122 PWSSRYQNEVLQNAKANPGAAALAAGQFQQSGDGQSVLFIENVKGDTFSNVFLAQLRPKG 181 Query: 183 T--HKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + ++ G ++ Q + L+ G + + +D I FK+Y + Sbjct: 182 NARPSVVVSEHGHMEQRRDGSQVVTLDQGTRFEGTALLRDFRITDFKNYQAIVGHQVVTL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + +L L + + + +RSE H RLT +I L+ + Sbjct: 242 DPNDSEQMSLDTLWHSDKPD----------FRSELHWRLTLVFSVLIMALMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 RQ + + + L + VF+ + P + ++ + + L ++ Sbjct: 290 NPRQGRVLSMLPAML--LYLVFFLLQSSLRSSGDKGRVDPAIAMWTVNVVYLALAVLLNA 347 Query: 358 Y 358 + Sbjct: 348 W 348 >gi|284049007|ref|YP_003399346.1| permease YjgP/YjgQ family protein [Acidaminococcus fermentans DSM 20731] gi|283953228|gb|ADB48031.1| permease YjgP/YjgQ family protein [Acidaminococcus fermentans DSM 20731] Length = 363 Score = 142 bits (359), Expect = 7e-32, Method: Composition-based stats. Identities = 60/370 (16%), Positives = 124/370 (33%), Gaps = 23/370 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINL-VSSSTESLNILLKISGYLIPT 59 M + YIL+ + + FL I L R+ ++ S + L+++ L+P Sbjct: 1 MSILDKYILKQMMQPFLFGVAAFSTIFVASSFLFRVTQYITQYGASYSSLIRLFLCLMPE 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 V+ P + + ++ N+E+ + + G S + P+L ++S+F + Sbjct: 61 VINYTFPMSMLLAALLTMGQLSSNSEITAMRSGGLSFRRIAAPILAAGFVVSLFSVVWAE 120 Query: 120 IIEPKCRSTIKQLSA---------KAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTL 170 + P +S +++ + Q + + + RL + Sbjct: 121 KVVPPAKSEYERIIKVEIKRDTKPRTQNHVLIKQVSKGQLVRLTYARTF----DEKQGMM 176 Query: 171 QGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT 230 + I I D + + +I ++ + I+ G + + M F L Sbjct: 177 KDITIEDWDNGKVARIQ--RTPQAKWTQGTWIMEGGTITDLTGKDGVARTMTFDKQVLPI 234 Query: 231 ESANSS-TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 + T+ K DQ L + + Y E ++R T L F LI Sbjct: 235 SETPKAITLDQKDPDQMTIGELKMYIDILKRQYMPTSKYEMEIYRRFTVPLASFFFALIG 294 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL--FLFCIS 347 + ++ + S+ I F + +++ Q P+L Sbjct: 295 V---PLGVQSQRTGASMGLGFSVVIIFIYYSIMTFMTGL-GQGGVIPPLLAAATPNLLCG 350 Query: 348 SIFLLMIKKK 357 + MI KK Sbjct: 351 AFGCWMIYKK 360 >gi|37528301|ref|NP_931646.1| hypothetical protein plu4480 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36787739|emb|CAE16852.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 366 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 61/368 (16%), Positives = 144/368 (39%), Gaps = 27/368 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQVAILFILLLIFFCQRLVEILGAAVEGNVPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + + +E+ ++ G + L+ L LA+L S ++ + Sbjct: 62 LILPLSLFLGVLMTFSKLYTESEITVMHACGLGKRVLVVSALILALLTSALAAVNVIWVM 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNTLQGIFIVDSR-- 179 P +Q+ A A+ + + + E F +D L + I N + +F+ R Sbjct: 122 PWSSKYQEQVVADAKANPSLAAIMEGRFKPSEDGNLVLYIGNV-HGNKFENVFLAQLRPV 180 Query: 180 DTQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 D Q + + G + +Q ++LN G + + + +D I +F+ Y S Sbjct: 181 DNQRPSVVISNGGHMVERPDGKQVVVLNHGTRYEGTAMLRDFRITEFRDYQAIIGHQTSI 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 K +++ L N + R+EFH RLT L +I ++ + Sbjct: 241 VDNNKVEQKSIIQLWQDNDKDS----------RAEFHWRLTLVLSVLIMAMMVVP--LSV 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFLFCISSIFLLM 353 RQ + +S+ + ++ F + + N P+++++L + + L + Sbjct: 289 VNPRQGR-----VLSMLPAMLLYLIFFLLQSSLRSNGSKGKLDPMIWMWLTNGTYLMLAL 343 Query: 354 IKKKYTKI 361 + + + Sbjct: 344 VLNIWDTL 351 >gi|325983220|ref|YP_004295622.1| permease YjgP/YjgQ family protein [Nitrosomonas sp. AL212] gi|325532739|gb|ADZ27460.1| permease YjgP/YjgQ family protein [Nitrosomonas sp. AL212] Length = 358 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 63/336 (18%), Positives = 129/336 (38%), Gaps = 25/336 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI R I F + L ++ + + + + T + L+K+ Sbjct: 1 MKLIERYIAREIMLPFTVVILILIGLFASFSSARLLAGAVTETLGIAGLIKLVFLKTLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + L +N++ EL +I + G S ++ VL +AI + I + + Sbjct: 61 LEVLIPIALYISVIMGLGRLNKDQELNVIRSVGISGHRIVIAVLSVAIPVGIISGMLSSY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFF-RLDDDLYIKISKYN-PNNTLQGIFIVDS 178 + P L A+A+ L + + F+ I + N + +Q IF Sbjct: 121 VRPWAYGESYILDAQAEAELNTNRFQAGRFYGSEKSGRVIYVRNKNEADKQMQNIF-HYI 179 Query: 179 RDTQTHKIYYAQSG-----SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 + + +I A+ + + DR I L++G +++ + I+ +++FK ++ Sbjct: 180 KKPDSSEIVIAKQAQQIKPTAEDDRPHIQLSEGTIYQLTSIASTDDVIQFKKMIYFIDND 239 Query: 234 NSSTIVLK-ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + K A + L P +E R+++ L V+ LI++ Sbjct: 240 FVTNYRRKAAATRTLWESDVP-------------RDIAELQWRISRPLATVLLALIALTF 286 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHK 328 RQ K I+ ++ F ++ S + Sbjct: 287 IHTAP--RQDKTEKTYLIA-ALVFAAYYNLSGLAKT 319 >gi|326568200|gb|EGE18282.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis BC8] Length = 442 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 42/293 (14%), Positives = 108/293 (36%), Gaps = 19/293 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + + F+V I ++++ + + ++ +L ++ GY P L Sbjct: 62 ILRRYMTTQVASTTALVLGFLVVILLGGRLIRYFGMAAEGGLNVGVLFRLIGYNFPYFLE 121 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + V + + E+ +++ +G SR + + ++ L ++L + + Sbjct: 122 LILPLSFFIGLMLVFGRLYTDHEMTVMNASGISRGRVARLLMPLVVVLMCIEGWVSMVAK 181 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIF------- 174 P + + +A F + F D ++ + + N L+ + Sbjct: 182 PWGMERATNIWQEQSVAQVFDLIRPQEFIS-SGDYHLYVGEMGANREFLKDVIIIQMHTA 240 Query: 175 ----IVDSRDTQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYT 227 I + + I +A+S + + L G + P S+ S + F+ Y Sbjct: 241 EPSDIQSRQSHKRDSIIFAKSATHVETGNGQIQLDLQQGRRYEVDPTSRQYSQIGFERYR 300 Query: 228 LQTE-SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQW 279 + T ++ + + LL + + + + + +E RL+ Sbjct: 301 MTLSVKPPEGTSHIRIEGVSTTELL--SIIQGHSKRDNPQEAYAELGYRLSMP 351 >gi|90408708|ref|ZP_01216857.1| putative permease [Psychromonas sp. CNPT3] gi|90310190|gb|EAS38326.1| putative permease [Psychromonas sp. CNPT3] Length = 365 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 134/356 (37%), Gaps = 20/356 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++ +S ++ I + + + + + +++L + +PT+ Sbjct: 2 ILRRYLMLETFKSQFGILFVLLLIFVSQKFIAILEQAINGVIAPDLVLTLLYLNLPTLGT 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + ++ +E++ + + G S +++K L L+ F + + Sbjct: 62 LMLPISFYLAILFAHGRLHSESEMVAMTSCGYSPNSVLKATLLLSFFTFAFASFNSLYLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFR-LDDDLYIKISKYNPNNTLQGIFIVD--SR 179 P + + + KA+ + L E F + ++ + + KY+ L+ IF S Sbjct: 122 PSAENEMIAVIEKAESDAGVATLIEGRFHKSSENGGVVYVEKYHEGQKLERIFASYWPSD 181 Query: 180 DTQTHKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + + A GS+ D + L DG+ + + + +F SY + + + Sbjct: 182 ENKAPSVITALHGSVQEKEDGTWLTLEDGQSYTGNVGEHEFDSSRFSSYEVHIANREIRS 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + S LL + R+E R+ L + L++ +A Sbjct: 242 RSRGVSALPTSILLTQTDD----------KSRAELQWRMAIPLSIL---LLTFMAVPLAK 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL--FLFCISSIFL 351 + ++ + + +L++ F S IE+ I ++ +F + +FL Sbjct: 289 VNPRQGRYAKLMPALALYLTYFLLLSTSKSLIEEGTLPILSIWGVQIVFLLGGVFL 344 >gi|37520500|ref|NP_923877.1| hypothetical protein gvip124 [Gloeobacter violaceus PCC 7421] gi|35211494|dbj|BAC88872.1| ycf84 [Gloeobacter violaceus PCC 7421] Length = 387 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 51/368 (13%), Positives = 128/368 (34%), Gaps = 23/368 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPT 59 + + Y+ + FL I + + + + L+S + L L++ +P Sbjct: 16 LTIMDRYLASELVLPFLFGVAAFASIGMAIGSLFELVRLISENGLPLTTALQVFLLRMPQ 75 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ P T ++ + E+ + +G S + ++ P L L++++S+ F Sbjct: 76 IITYTFPMSVLFATLLAYGRLSGDLEITALQASGVSILRVVVPTLLLSVIVSVITFFFNE 135 Query: 120 IIEPKCRSTIKQLSAKA-------QLALTFSYLEENLFFRLDDD------LYIKISKYNP 166 ++ P A+A + E + + + ++ Sbjct: 136 VVVPTANQEASTTLARAIGGGDRPRFTKDNILYPEYNWVPGKAGEREYALIRLFYARRYS 195 Query: 167 NNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSY 226 + + G+ I+D +++ A S D A +G + +I++F+ Sbjct: 196 DGIMYGLTILDYSQENLNQVITADSAYFDPKTDAWRFRNGTSYLIGNDGTYRNILQFQEQ 255 Query: 227 TLQTESANS--STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVI 284 ++ + V + + L N R E+ S +++ Sbjct: 256 QVKISEDPLKFAQEVRRPEEMTTVELRRYIELAQNARQEIRGLLVS-LYQKYAIPSVCFA 314 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLFL 343 F L+ +R+++ + + + LSI ++ F +I + Q P L +L Sbjct: 315 FALVG-----APLGLRRQRTSNALGLGLSILIIFSYYIFLFIAQALGQTGVLPPWLGAWL 369 Query: 344 FCISSIFL 351 + ++ + Sbjct: 370 PALITMAV 377 >gi|227824355|ref|ZP_03989187.1| permease [Acidaminococcus sp. D21] gi|226904854|gb|EEH90772.1| permease [Acidaminococcus sp. D21] Length = 362 Score = 142 bits (358), Expect = 9e-32, Method: Composition-based stats. Identities = 55/367 (14%), Positives = 123/367 (33%), Gaps = 14/367 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINL-VSSSTESLNILLKISGYLIPT 59 M+ + YIL+ + + F I L R+ ++ S + L ++ L+P Sbjct: 1 MRILDKYILKQMLQPFAFGVAAFSTIFVASSFLFRVTQYITQYGASYSSLFRLFLCLMPE 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 V+ P + + + ++ N+E+ + + G S + P+L ++S+F + Sbjct: 61 VINYTFPMSMLLASLLTMGQLSGNSEITAMRSGGMSFRRIAMPILAAGFVVSLFSVVWAE 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLD--DDLY--IKISKYNPN-NTLQGIF 174 + P ++ +++ + T ++++ + L ++ ++ I Sbjct: 121 KVVPPAKAEYERIIQQEIKNNTKPRTQDHILLKNISKGQLTRLTYARTFDEKAGVMKDIT 180 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 I D + +I I+ G + + M F L Sbjct: 181 IEDWDKGRVVRIQRTPEAKWQNG--TWIMEKGTITEITNEEGLTRTMTFDKQVLPITETP 238 Query: 235 SS-TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + T+ K D+ L + + Y E + R T L F LI + Sbjct: 239 KTITLDQKDPDEMTIGELKMYIGILERQYQPTSKYVMEIYSRFTVPLASFFFALIGV--- 295 Query: 294 DKRALVRQRKKIHPIFISLSISFGVF--WGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 ++ + S+ I F + F + + P +I C + Sbjct: 296 PLGVQSQRAGTSMGLGFSVVIIFIYYSIMTFMTGLGQGGVIPPFIAAAVPNFLCGCAGAY 355 Query: 352 LMIKKKY 358 L+ +K + Sbjct: 356 LIWQKDH 362 >gi|312884631|ref|ZP_07744334.1| permease [Vibrio caribbenthicus ATCC BAA-2122] gi|309367723|gb|EFP95272.1| permease [Vibrio caribbenthicus ATCC BAA-2122] Length = 367 Score = 142 bits (358), Expect = 9e-32, Method: Composition-based stats. Identities = 54/358 (15%), Positives = 122/358 (34%), Gaps = 25/358 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + ++++ + + +++ +P++ Sbjct: 2 IIVRYLIRETLKSQFAIFFILFLVFLSQKLIRVLADATDGDIPASLVANYVALSMPSMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LIK L+LAI+ + + Sbjct: 62 IMLPLSLFLGILLTFGRLYAESEITVMNATGIGNKFLIKAALYLAIITGLLAAANAFFFA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNTLQGIFIVDS--R 179 P ++ + L +A L++ F D + I + LQ +F+ R Sbjct: 122 PYSQNQLVHLQEEAAAENNVELLQKGHFQPSPDGSSVVFIDDIDKK-KLQNVFVAQLRPR 180 Query: 180 DTQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 D+ + ++Q G + RQ I + DG + P D + F Y Sbjct: 181 DSILPSVSFSQYGEVKELSDGRQVIRMYDGTRYEGIPTRLDYMVTNFDQYEGLIGQREIK 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + L + ++E R++ L L++++ Sbjct: 241 SKGRGLDAIPTLNLF----------GDHRPAAQAELQWRISLVLC---IPLLTMLVVPLS 287 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-----PYYIPILYLFLFCISSI 349 A+ ++ + + ++ I F S + IE PI L L +I Sbjct: 288 AVNPRQGRFAKMGPAILIFLAYFLAISAMKSAIESGSVSAVIGMWPINGLLLITAIAI 345 >gi|171463871|ref|YP_001797984.1| permease YjgP/YjgQ family protein [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193409|gb|ACB44370.1| permease YjgP/YjgQ family protein [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 371 Score = 142 bits (358), Expect = 9e-32, Method: Composition-based stats. Identities = 60/366 (16%), Positives = 142/366 (38%), Gaps = 17/366 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ + R + + L +V I +++ + ++ + L + L Sbjct: 2 IFKQALRRELSFTTGGVFLVLVTIMVTTLVIRILGYAANGAVNPEDTLVLIALATLGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VL +++E+++ +G S LI+P+L A L I + + + Sbjct: 62 VLLTVSLFVATLIVLVRWYKDSEMIVWLASGLSVTNLIRPILQFATPLIIVIALLALFVW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIKISKYN-PNNTLQGIFIVDSRD 180 P +S ++Q S + F + I + + + ++ IF+ + Sbjct: 122 PWANRESTLISQRSQQRDDVSVVSAGQFKESAKAERVFFIEELDVDKSKVKNIFVA-NSK 180 Query: 181 TQTHKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 I + +G I + ++I+L++G + P D I++F Y+ + S ++ Sbjct: 181 NGRLSIAVSSTGYIQNSEGGEKSIVLHNGRRYEGQPTQPDFRILEFNEYSTKIRSKDALA 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ ++ LLN +PN + P R+E R+ L + LI+I A Sbjct: 241 PAPRDREKTITELLN-DPNPTSVNPN-----RAELLWRIGLPLMALGLVLIAIPLA---Y 291 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN--PYYIPILYLFLFCISSIFLLMIK 355 + + +F ++ I + + + Q ++ I + L + +L+ Sbjct: 292 VNPRLGNYTAMFYAVLIYLIYSNLLNLTQNFVSQGRISVFVAIWPIHLLALLITTVLIRN 351 Query: 356 KKYTKI 361 + + Sbjct: 352 RINPSL 357 >gi|326565140|gb|EGE15331.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis 103P14B1] gi|326572841|gb|EGE22826.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis CO72] gi|326573713|gb|EGE23671.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis O35E] Length = 437 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 43/293 (14%), Positives = 108/293 (36%), Gaps = 19/293 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + + F+V I ++++ + + ++ +L ++ GY P L Sbjct: 57 ILRRYMTTQVASTTALVLGFLVVILLGGRLIRYFGMAAEGGLNVGVLFRLIGYNFPYFLE 116 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + V + + E+ +++ +G SR + + ++ L ++L + + Sbjct: 117 LILPLSFFIGLMLVFGRLYTDHEMTVMNASGISRGRVARLLMPLVVVLMCIEGWVSMVAK 176 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIF------- 174 P + + +A F + F D ++ + + N L+ + Sbjct: 177 PWGMERATNIWQEQSVAQVFDLIRPQEFIS-SGDYHLYVGEMGANREFLKDVIIIQMHTA 235 Query: 175 ----IVDSRDTQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYT 227 I + Q I +A+S + + L G + P S+ S + F+ Y Sbjct: 236 EPSDIQSRQSHQRDSIIFAKSATHVETGNGQIQLDLQQGRRYEVDPTSRQYSQIGFERYR 295 Query: 228 LQTE-SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQW 279 + T ++ + + LL + + + + + +E RL+ Sbjct: 296 MTLSVKPPEGTSHIRIEGVSTTELL--SIIQGHSKRDNPQEAYAELGYRLSMP 346 >gi|281357796|ref|ZP_06244282.1| permease YjgP/YjgQ family protein [Victivallis vadensis ATCC BAA-548] gi|281315743|gb|EFA99770.1| permease YjgP/YjgQ family protein [Victivallis vadensis ATCC BAA-548] Length = 371 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 59/372 (15%), Positives = 128/372 (34%), Gaps = 21/372 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+ R +F M+ + F +++ ++ V S S + + Y++P + Sbjct: 1 MKILNWYVTRGFLLAFFMAIGILTFGMTGANLVKVLDYV-SQGISFFTFFEFTLYILPII 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P+ + V ++ ++E+ + G S + ++ P+L + L +F + Sbjct: 60 LTFTVPWAVMVAVMLVFGRLSADSEITAMRACGVSILQIVSPILIITFFLMLFCLYLQVE 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + L A + + E ++ I I + ++G+ I D Sbjct: 120 VGPPLLGKSRTLMQTAAINQPLAIFEPGK-QIEFENTIIYIDDKEGEDGIKGVQIYTLSD 178 Query: 181 TQT-HKIYYAQSGSIDLDRQAIIL-----------NDGEVHRKSPISKDISIMKFK---S 225 QT + A+ G + +D++ +L G ++ + F Sbjct: 179 PQTVAQDISAERGKLLVDKEKQLLIVRLFDCLVVDKKGAAEQQQDGDAGMPTRFFTQQLE 238 Query: 226 YTLQTE-SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVI 284 ++ AN I KA L+ L+ + E E ++R+ L P+ Sbjct: 239 FSFNYGKQANERRISTKAKYMKLTDLMGKIRLTKQLERDTTE-LEVELNQRIAFALSPIA 297 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 F L+ + A R+ + + + Y +L+L Sbjct: 298 FLLLGLPLAI--RTSRRETSVGLFLSVILAGVFFLSIILCESLSSFPHLYPQYLLWLPNI 355 Query: 345 CISSIFLLMIKK 356 + +M + Sbjct: 356 IFQILGAVMTYR 367 >gi|326559485|gb|EGE09908.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis 7169] gi|326566095|gb|EGE16252.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis BC1] gi|326567798|gb|EGE17902.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis 12P80B1] gi|326572163|gb|EGE22159.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis BC7] Length = 437 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 42/293 (14%), Positives = 108/293 (36%), Gaps = 19/293 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + + F+V I ++++ + + ++ +L ++ GY P L Sbjct: 57 ILRRYMTTQVASTTALVLGFLVVILLGGRLIRYFGMAAEGGLNVGVLFRLIGYNFPYFLE 116 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + V + + E+ +++ +G SR + + ++ L ++L + + Sbjct: 117 LILPLSFFIGLMLVFGRLYTDHEMTVMNASGISRGRVARLLMPLVVVLMCIEGWVSMVAK 176 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIF------- 174 P + + +A F + F D ++ + + N L+ + Sbjct: 177 PWGMERATNIWQEQSVAQVFDLIRPQEFIS-SGDYHLYVGEMGANREFLKDVIIIQMHTA 235 Query: 175 ----IVDSRDTQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYT 227 I + + I +A+S + + L G + P S+ S + F+ Y Sbjct: 236 EPSDIQSRQSHKRDSIIFAKSATHVETGNGQIQLDLQQGRRYEVDPTSRQYSQIGFERYR 295 Query: 228 LQTE-SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQW 279 + T ++ + + LL + + + + + +E RL+ Sbjct: 296 MTLSVKPPEGTSHIRIEGVSTTELL--SIIQGHSKRDNPQEAYAELGYRLSMP 346 >gi|260551090|ref|ZP_05825294.1| permease YjgP/YjgQ family protein [Acinetobacter sp. RUH2624] gi|260405857|gb|EEW99345.1| permease YjgP/YjgQ family protein [Acinetobacter sp. RUH2624] Length = 366 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 52/355 (14%), Positives = 129/355 (36%), Gaps = 16/355 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + + L+ + I ++++ + + +IL I GY +P L Sbjct: 2 IIRRYLVKQVVSTSLVVIALLTLIMMGGRLIKYFGVAAQGRLDASILFSIIGYRLPEFLT 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + V + + E+ +++ +G SR L + ++ + ++ + + + Sbjct: 62 LILPLGFFIGLMLVFGRLYVDHEMAVLNGSGVSRHQLARLLIPMTLVYMVCQSVLMLWMT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDS--R 179 P ++L+ + F + F I + + L+ IF + Sbjct: 122 PWGLREFEKLTTTQAVRTGFDLVRPREFISSGP-YTIYAGSLSEDRKNLKDIFFYQRAAK 180 Query: 180 DTQTHKIYYAQSGS----IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + + + A+ + + + L G + P + +F+SY L+ E N Sbjct: 181 EGKPDVMILAKEATRVEVANDTANVVDLVQGRRYEIYPGQPKYTQAEFQSYRLRLE--ND 238 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + +++D + P + RSE RL ++ ++S+ ++ Sbjct: 239 KDVKFESSD------VEALPTSKLLAKTNDPVIRSELGWRLFGPFTIIVALMMSVALSEV 292 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 + ++ P + + I K E + + P L ++IF Sbjct: 293 SPRQGRYYRLIPSIFIFASLIVLMIAIKTRISKGELDIWAYPAALLVYAIAAAIF 347 >gi|262274979|ref|ZP_06052790.1| putative permease [Grimontia hollisae CIP 101886] gi|262221542|gb|EEY72856.1| putative permease [Grimontia hollisae CIP 101886] Length = 366 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 51/360 (14%), Positives = 129/360 (35%), Gaps = 22/360 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R ++ L + + + + ++ + + + +L + G +P++ Sbjct: 2 IIVRYLIRETVKTQLAVLFVLFLVFFSQKFIRVLANATDGSIPGGDVLTLVGLYMPSMGM 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LAI+ + + Sbjct: 62 LMLPLSLYIGILITFGRLYAESEITVMNATGIGNKFLIRAALYLAIITGSVAAFNALWLT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNNT-LQGIFIVD--S 178 P ++ + L + D + ++ + L +FI Sbjct: 122 PWANDKEVKVMESLEADTGLELLVQGKIQTTPDGQAVVYVNDITGDGKDLHKVFIAQPVP 181 Query: 179 RDTQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 R T + A+ G I RQ + LN+G + P D ++ +++Y + Sbjct: 182 RGTLRPNVVVAEKGFISELPDGRQVLDLNNGIRYEGVPTLLDYTVTDYENYQVLIGQREV 241 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + L+N E ++E R++ + + L++++ Sbjct: 242 RQKNRDWDAMPTQILVN----------ESSPRAQAELQWRISL-VLCI--PLMTMIVVPL 288 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN--PYYIPILYLFLFCISSIFLLM 353 A+ ++ + +F ++ I F S +E+ P I + + L + +L+ Sbjct: 289 SAVNPRQGRFAKLFPAVLIYLAYFLSISAAKSAVEEGKLPAEIGLWSVNLIALLVALMLI 348 >gi|110638188|ref|YP_678397.1| permease [Cytophaga hutchinsonii ATCC 33406] gi|110280869|gb|ABG59055.1| conserved hypothetical protein; possible permease [Cytophaga hutchinsonii ATCC 33406] Length = 483 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 46/238 (19%), Positives = 100/238 (42%), Gaps = 9/238 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K +L +L+ F+++ + FI + IL+ I+ + S ++ Y + Sbjct: 4 IKRLDLLVLKAFFGPFILTVFVVTFIFLMQTILKYIDELVGKGLSYLDYAELMMYFSMNI 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP+ P + + ++ + EL I ++G S I ++ P+ + ++ L+ N Sbjct: 64 LPVALPLAILLSSLMTFGNLGQFNELTAIKSSGISLIRVMVPIAIWVLGCTVGLYFFNNY 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKI-SKYNPNNTLQGIFIVD-S 178 + PK L + L+ +F+ IKI K++ +++++G+ I D + Sbjct: 124 VVPKANLKAFSLLYDLRQKKPSLDLKPGVFYNGIPGYSIKIVQKFDNDSSIKGVIIYDHT 183 Query: 179 RDTQTHKIYYAQSGSIDLDRQ----AIILNDGEVHRKSPISKDISIM---KFKSYTLQ 229 + + A SGS+ L Q A+ L G + + +S + +F + Sbjct: 184 QSRGNTDVIIADSGSMYLFNQSQYLALELFRGNSYNEFKGEGGMSYINPEEFVRNSFD 241 >gi|332707452|ref|ZP_08427501.1| putative permease [Lyngbya majuscula 3L] gi|332353803|gb|EGJ33294.1| putative permease [Lyngbya majuscula 3L] Length = 388 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 54/360 (15%), Positives = 138/360 (38%), Gaps = 22/360 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPT 59 + + YI+ + L + + + + + V+ + L I L++ IP Sbjct: 16 LSVMDRYIVFELIPPLLFGIGAFSSLGVAIGTLFELVRKVTEAGLPLGIALQVLLLQIPQ 75 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + P + + ++ ++EL+ + + G S L+ P + +++L++ F+ Sbjct: 76 FISYALPMSMLLAALMAYSRLSSDSELIAMRSFGVSIYRLVIPAVVVSLLVTSLTFVFNE 135 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLF------FRLDDD-------LYIKISKYNP 166 ++ P K KA S+ E N+F +L + + +++ Sbjct: 136 LVVPAANYQSKITLDKALKKERPSFQERNIFYPEYQKVKLPNGKKVNKIKRWFYAEQFD- 194 Query: 167 NNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSY 226 ++G+ I+D T +I ++S + DG ++ SP + +I++F+ Sbjct: 195 GKQMRGLTILDFSQTGLEQIVTSESAVWNPTENLWDFLDGTIYIISPDASYRNILRFQKQ 254 Query: 227 TLQT--ESANSSTIVLKANDQNLSFLLNPNPNNPNY-RPELLETYRSEFHKRLTQWLFPV 283 LQ + + + N++ L + + + R ++++ + Sbjct: 255 KLQLPRTPLDLAKKNRDYGEMNIAQSLERLEVLRHSGNAKKIRKLRIRIQQKISFPFVCL 314 Query: 284 IFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 +FGL+ + ++ K IS+ + F + +I + + + P++ +L Sbjct: 315 VFGLVGASLGTRP---QRTGKATSFGISVLVIFSYYLLG-FITNALGLVNIFSPLMAAWL 370 >gi|284051460|ref|ZP_06381670.1| permease YjgP/YjgQ [Arthrospira platensis str. Paraca] gi|291568812|dbj|BAI91084.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 392 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 55/379 (14%), Positives = 131/379 (34%), Gaps = 30/379 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVI-QILQRINLVSSSTESLNILLKISGYLIPT 59 + + YI++ + F+ +A + + + + V+ S +++ ++ +P Sbjct: 19 LSVLDRYIIQELIPPFIFGVGLFTSVAVTVGTVFELVRRVAESGLPVSVAFQVFLLKMPD 78 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + + P + T V ++ ++EL+ I + G S L+ P + + +++ F Sbjct: 79 FMVLAFPMSMILTTLMVYGRLSSDSELIAIRSCGISLYRLVIPAIIFSFVVTGMTFAFNE 138 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLY--------------IKISKYN 165 II P KA + N+FF + + ++ Sbjct: 139 IIVPAANFQATMTLQKALNEDALNISSTNIFFPEYERVSVEGTNRRVNVLRRLFYAEEF- 197 Query: 166 PNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKS 225 + + G+ I+D +I +++ + +G V+ P +I +F Sbjct: 198 ADGKMSGVTILDRSRAGITQIISSRTAIWNPQESTWDFYNGTVYIVDPDGSYRNIARFDH 257 Query: 226 YTLQTE--SANSSTIVLKANDQNLS---FLLNPNPNNPNYRPELLETYRSEFHKRLTQWL 280 L + ++ + N++ L + + L R + ++ Sbjct: 258 KQLHLSRVPLDLASQDRDYGEMNIAQTKEYLELMKLSGDQAKILKTKVRIQ--QKYALPF 315 Query: 281 FPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY 340 V+FGL+ + + + IS+ I F + S+I I Q P + Sbjct: 316 VCVVFGLLGSSLGSRPG---RTNRATSFGISVMIIFAYYL-LSFITGAIGQKGIISPFMA 371 Query: 341 LFL---FCISSIFLLMIKK 356 +L + L+ + Sbjct: 372 AWLPTMLGLGVSGFLLYRS 390 >gi|296114026|ref|YP_003627964.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis RH4] gi|295921720|gb|ADG62071.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis RH4] Length = 396 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 43/293 (14%), Positives = 108/293 (36%), Gaps = 19/293 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + + F+V I ++++ + + ++ +L ++ GY P L Sbjct: 16 ILRRYMTTQVASTTALVLGFLVVILLGGRLIRYFGMAAEGGLNVGVLFRLIGYNFPYFLE 75 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + V + + E+ +++ +G SR + + ++ L ++L + + Sbjct: 76 LILPLSFFIGLMLVFGRLYTDHEMTVMNASGISRGRVARLLMPLVVVLMCIEGWVSMVAK 135 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIF------- 174 P + + +A F + F D ++ + + N L+ + Sbjct: 136 PWGMERATNIWQEQSVAQVFDLIRPQEFIS-SGDYHLYVGEMGANREFLKDVIIIQMHTA 194 Query: 175 ----IVDSRDTQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYT 227 I + Q I +A+S + + L G + P S+ S + F+ Y Sbjct: 195 EPSDIQSRQSHQRDSIIFAKSATHVETGNGQIQLDLQQGRRYEVDPTSRQYSQIGFERYR 254 Query: 228 LQTE-SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQW 279 + T ++ + + LL + + + + + +E RL+ Sbjct: 255 MTLSVKPPEGTSHIRIEGVSTTELL--SIIQGHSKRDNPQEAYAELGYRLSMP 305 >gi|34498370|ref|NP_902585.1| hypothetical protein CV_2915 [Chromobacterium violaceum ATCC 12472] gi|34104224|gb|AAQ60583.1| conserved hypothetical protein [Chromobacterium violaceum ATCC 12472] Length = 368 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 46/286 (16%), Positives = 101/286 (35%), Gaps = 14/286 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ + R + + L + ++ I Q + + + + + + G+ P Sbjct: 2 VFQKSLTRELTLTALGVFVVLLAIIVSTQAINLLGRAAEGQIANEAVTALIGFWTLGFFP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT R+ E+++ + G S + P++ + L+I + + Sbjct: 62 VLMILTVFVSVLVVLTRTWRDHEMVVWLSAGLSLRDWVWPIMRFTLPLAILIAGVTLFVG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN--NTLQGIFIVDSRD 180 P + + + S + +F + + + IF+ D D Sbjct: 122 PWADQRSQDYAEIIKRREEISAISPGVFKESASSSKVYFIENYSGLHSAATNIFMQDMTD 181 Query: 181 TQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + +A+ G I + ++L DG+ + P D I +FK YT + + T Sbjct: 182 GKV-STIFAKHGYISIKPDGERVLVLEDGKRYVGEPGQADYQIGEFKRYTASLGDSQAVT 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPV 283 + +L NP Y R+E RL+ + + Sbjct: 241 GPASNRQSIPTSVLLAGSGNPEY--------RAELAWRLSMPISCI 278 >gi|119503287|ref|ZP_01625371.1| predicted Permease [marine gamma proteobacterium HTCC2080] gi|119460933|gb|EAW42024.1| predicted Permease [marine gamma proteobacterium HTCC2080] Length = 363 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 50/359 (13%), Positives = 119/359 (33%), Gaps = 19/359 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ F LY+ R + L + + + + ++ + + + S ++LL + + +P+ Sbjct: 1 MRIF-LYLTRDVVTHTLAVAFVLFLVVFSGRFIKYLAEAAVGSLSADVLLPVMLFKLPSF 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + L M +E++++ G S L +L + + + Sbjct: 60 FELILPLALFIAVLLSLGRMYAESEMVVLKACGISPSRLAVFLLVPGLFIMCLVAGLTMY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNTLQGIFIVDSR 179 + P+ + ++L + A + F L + + + +F+V+ + Sbjct: 120 LGPEGSARAQRLLDNPRNAEGLQLMAAGRFKSQRGGELVTYTERIDKAGVMHNVFVVEEQ 179 Query: 180 D-TQTHKIYYAQSGSIDLD----RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 T ++ AQ I D R+ + L G + P + FK Sbjct: 180 SGTDATQVTLAQEAEIITDSATNRRYLELRGGTRYSGVPGESAYEAVAFKRLGELIPEER 239 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 S D + L + N R+ R++ + +I++ Sbjct: 240 DSLRASTRIDATPTADLLSSDNP---------RKRATLWWRISLPFLVPVSVVIALA--- 287 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 +R + + +L++ F + +E +L L L+ Sbjct: 288 LSKTDARRGRYARLGPALALFLTYFLALTQARSLMESGSGPGAMLATHLMFSLVALFLL 346 >gi|152987845|ref|YP_001346668.1| hypothetical protein PSPA7_1283 [Pseudomonas aeruginosa PA7] gi|150963003|gb|ABR85028.1| membrane protein, putative [Pseudomonas aeruginosa PA7] Length = 372 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 58/361 (16%), Positives = 125/361 (34%), Gaps = 26/361 (7%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ R + + ++ I + ++ + + L I + IP L ++ Sbjct: 5 RYLSREVLVTMSAVSAVLLVIIMSGRFIKYLAQAAQGLLDPGSLFLIMAFRIPGFLQLIL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + + +E+ ++ TG S+ L+ + A+L++I + + P+ Sbjct: 65 PLGLFLGILLAYGRLYLESEMTVLSATGMSQKRLLGYTMAPALLVAILVAWLSLFLAPQG 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYNPN-NTLQGIFIVDSR---- 179 + L K F L F + D + + + + L GIFI Sbjct: 125 INQFALLLNKQDTLTEFDTLVPGRFQAMRDGTRVTYTEELSKDRGELAGIFISQKDLNSS 184 Query: 180 -DTQTHKIYYAQSGS--IDLDRQ-AIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + I A+ G+ I D +IL++G + +P + +K+ +Y + + Sbjct: 185 NQERGISILVAEKGTQNIQADGSRYLILHNGYRYDGNPGQANYRAIKYDTYGVMLPKPEA 244 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 S+ V + + L + Y++E RL+ L + L+++ Sbjct: 245 SSEVSERDAVPTVDLFGSDNP----------RYQAELQWRLSTPLLVFVVTLLAVP--LS 292 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY----LFLFCISSIFL 351 R RQ + + + L + + + L+ LFL +F Sbjct: 293 RVNPRQGRFLKLLPAILLYMAYLALLIAVRGQLDKGKIPMAVGLWWVHGLFLAIGLILFY 352 Query: 352 L 352 Sbjct: 353 W 353 >gi|313205632|ref|YP_004044809.1| permease yjgp/yjgq family protein [Riemerella anatipestifer DSM 15868] gi|312444948|gb|ADQ81303.1| permease YjgP/YjgQ family protein [Riemerella anatipestifer DSM 15868] gi|315022637|gb|EFT35662.1| hypothetical protein RAYM_03529 [Riemerella anatipestifer RA-YM] gi|325334940|gb|ADZ11214.1| permease YjgP/YjgQ family protein [Riemerella anatipestifer RA-GD] Length = 484 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 47/226 (20%), Positives = 83/226 (36%), Gaps = 7/226 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K + YI++ FL + FI V I ++ + S + K+ Y+ +V Sbjct: 2 LKKLDRYIIKTFFGPFLFIFSVLFFIFLVNIIWIKLYQFTGKGLSPFEIGKLLFYMGVSV 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + MV P + + + EL + G S +++P++F+ LLSI LFI N Sbjct: 62 VNMVLPLTVLLSSIMTFGAFGERYELAAMKAAGISLFRIMRPLIFVVTLLSIILFIFSNN 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN--TLQGIFIVDS 178 + P K + + F +K K + N L+GI I Sbjct: 122 VIPDFNRKAKNMLYNIAVTKPALNFTAGQFIGAIPGASVKFDKISGENGENLEGIIIHKE 181 Query: 179 RDTQTH-KIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDIS 219 + + A G + +IL G V+ S + + Sbjct: 182 VNGNNPQQTIIAPKGKFVPAQNRNYLKLILYKGYVYEDENTSYNYN 227 >gi|119944176|ref|YP_941856.1| permease YjgP/YjgQ family protein [Psychromonas ingrahamii 37] gi|119862780|gb|ABM02257.1| permease YjgP/YjgQ family protein [Psychromonas ingrahamii 37] Length = 358 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 128/356 (35%), Gaps = 22/356 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++ +S + +V I + + + + ++++ + +P + Sbjct: 2 ILLRYLMLETFKSQIGILFVLVLIFVSQKFITILAQAINGVIPADLVMTLLYLNLPQLGT 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + ++ +E++ + + G S ++K L L+ L F + + Sbjct: 62 LMLPISFYLAVLFAHGRLHGESEMIAMSSCGYSPNNVLKATLLLSFLTFAFAAYNSLYLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD--SRD 180 P + + +AQ + + L E F + + + + + + L IF Sbjct: 122 PLSEDKMISVIEEAQANTSSATLIEGRFHKTSGNGSVVYIEKSADKKLDKIFAAHWPEDR 181 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 Q + A G ++ D + L DG+ + + +FK+Y + + Sbjct: 182 KQAPSVLTAAEGYLESKKDGTWLTLTDGQRYAGIVGQHEFDHSEFKTYEVHIANREVQKQ 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 V + L + +NP Y+ +E R+ PV L++ +A + Sbjct: 242 VRGVQALPTAALF--SVDNPKYQ--------AELQWRIG---IPVSILLMTFMAVPLAKV 288 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 ++ + + +L++ F S IE L +F I I L++ Sbjct: 289 NPRQGRYSKLLPALALYLTFFLLLSTAKSLIED-----GSLPVFSIWIVQISFLLL 339 >gi|253997951|ref|YP_003050014.1| permease [Methylovorus sp. SIP3-4] gi|253984630|gb|ACT49487.1| permease YjgP/YjgQ family protein [Methylovorus sp. SIP3-4] Length = 366 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 53/362 (14%), Positives = 138/362 (38%), Gaps = 24/362 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ +L+ + + + + L + I ++ I + + + + + + + G+ + LP Sbjct: 2 LFKRSLLQELVGTAIGAFLVLFGIVIAQRVAYYIGVAAKGSLASDAINTLLGFSMLKFLP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M+ + LT +R++E+++ ++G I+PVL AI + + + + Sbjct: 62 MILSLTIFLAVLLTLTRWHRDSEMVVWFSSGMGLAGWIRPVLTFAIPVVAVIAVLSLFVT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIKISKYNP-NNTLQGIFIVDSRD 180 P + + + + + + +F + D + ++ N ++ IF+ + Sbjct: 122 PWATNKGSEFRDQLKSRDELASISPGVFKESRNADRVFFVESFDELGNVVKNIFVQSVQH 181 Query: 181 TQTHKIYYAQSGSIDLD--RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + +Q D +++ G + P + + S +F+ Y+++ E Sbjct: 182 QRLGVVVASQGHRTVADNGDNFLVMEHGRRYEGKPNTAEFSTTEFERYSIRIEPNEVKEE 241 Query: 239 VLKANDQNLSFLL-NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 LL N NP N +E RL P+ L+ ++A Sbjct: 242 PPGTAALGSVELLKNHNPANN-----------AELQWRLA---IPISAFLLVLLAIPLSF 287 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL----FCISSIFLLM 353 + + + + ++L I ++ I+ P++ L+ F + +I++ Sbjct: 288 VDNRSGRSANMMLALLIYI-IYNNMLSIVQAWLTQGKLNPVVGLWPVHVFFLLLTIWMFY 346 Query: 354 IK 355 + Sbjct: 347 RR 348 >gi|183600430|ref|ZP_02961923.1| hypothetical protein PROSTU_04001 [Providencia stuartii ATCC 25827] gi|188020226|gb|EDU58266.1| hypothetical protein PROSTU_04001 [Providencia stuartii ATCC 25827] Length = 365 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 58/358 (16%), Positives = 139/358 (38%), Gaps = 21/358 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + + + + +++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFVLMLIFFSQKSIDILGAAVQGNIPSDLVLPLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + + +E+ ++ G + L+K L LA L ++ + + Sbjct: 62 LILPLSLFLGLLMTYSKLYTESEITVMHACGLGKSVLVKAALVLATLTALVAIGNIAWML 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIKISKYNPNNTLQGIFIVDSR-- 179 P +Q+ A A+ + + E F D ++ + I N + +F+ R Sbjct: 122 PWSSQYQEQVLADAKANPGLAAMVEGQFKTTKDRNIVLYIGDV-KGNDFKNVFLAQLRAT 180 Query: 180 DTQTHKIYYAQSGSIDLD---RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + Q + A SG + D RQ ++L++G + + + +D I FK+Y + S Sbjct: 181 NEQRPSVVVADSGYMREDADGRQIVVLDEGTRYEGTALLRDFRITDFKNYQAVIDHKPSD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + +N+ L N + N +EFH RLT V+ L+ Sbjct: 241 ARNDRVEQKNMLQLWKANDFDSN----------AEFHWRLTIVFSVVVMALM---VVPLS 287 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-NPYYIPILYLFLFCISSIFLLM 353 + ++ ++ + ++ + F S + + E+ + ++ ++ +++ Sbjct: 288 EVNPRQGRVLSMLPAMLLYLIFFLLQSTLRNSAEKGDVDPKYAMWAVNLGYLALAIIL 345 >gi|326574663|gb|EGE24599.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis 101P30B1] Length = 437 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 43/293 (14%), Positives = 108/293 (36%), Gaps = 19/293 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + + F+V I ++++ + + ++ +L ++ GY P L Sbjct: 57 ILRRYMTTQVASTTALVLGFLVVILLGGRLIRYFGMAAEGGLNVGVLFRLIGYNFPYFLE 116 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + V + + E+ +++ +G SR + + ++ L ++L + + Sbjct: 117 LILPLSFFIGLMLVFGRLYTDHEMTVMNASGISRGRVARLLMPLVVVLMCIEGWVSMVAK 176 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIF------- 174 P + + +A F + F D ++ + + N L+ + Sbjct: 177 PWGMERATNIWQEQSVAQVFDLIRPQEFIS-SGDYHLYVGEMGANREFLKDVIIIQMHTA 235 Query: 175 ----IVDSRDTQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYT 227 I + Q I +A+S + + L G + P S+ S + F+ Y Sbjct: 236 EPSDIQSRQSHQRDSIIFAKSATHVETGNGQIQLDLQQGRRYEVDPTSRQYSQIGFERYR 295 Query: 228 LQTE-SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQW 279 + T ++ + + LL + + + + + +E RL+ Sbjct: 296 MTLSVKPPEGTSHIRIEGVSTTELL--SIIQGHSKRDNPQEAYAELGYRLSMP 346 >gi|262038173|ref|ZP_06011570.1| permease, YjgP/YjgQ family [Leptotrichia goodfellowii F0264] gi|261747821|gb|EEY35263.1| permease, YjgP/YjgQ family [Leptotrichia goodfellowii F0264] Length = 366 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 64/371 (17%), Positives = 132/371 (35%), Gaps = 17/371 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI + + FI + +++ + + +S ++ Y++P + Sbjct: 1 MKIIDKYIYNSLILPSVFGISIFTFILMLNVLIEAMERLFASDLPFLSVVDYFFYVVPGI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + V ++ E++ ++ +G S +I+P ++L+ E Sbjct: 61 LVQTIPMGAFLGVMLVYGGLSETNEIIAMEGSGISLFRIIRPAFIFGLILTFIGLGLEIY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF-FRLDDDLYIKISKYNPNNTLQG--IFIVD 177 + P+ I + + S EE +F + I K + + + Sbjct: 121 VNPRALENINKQTKMLLATRPNSLTEEKIFLTNPEKGFGFYIDKVDNKKATASQFLLLNK 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE----SA 233 + I+ A+S D I+L+D + + ++K + S Sbjct: 181 QGNNPYPVIFLAKSARF--DPGVIVLSDVKGYSFDKEGNSQVAAEYKEQNVPVSTFFTSE 238 Query: 234 NSSTIVLKANDQNLSFL---LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 K ++ NL L N N NP + L+ E ++R+ L V + Sbjct: 239 EGEQRQKKRSEMNLKELREFYNNNIGNPEMKEAALKALI-ESYQRVIGPLASV---FLCW 294 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSI 349 + R+ K ISL + FG +Y I +N + I +++ F + + Sbjct: 295 LGVLLSVGNRRSGKGISFGISLIVIFGYIAIVNYAKIMILKNNVPVSIAMWIPNFILFLL 354 Query: 350 FLLMIKKKYTK 360 + KKY + Sbjct: 355 CVYFSIKKYRR 365 >gi|237799873|ref|ZP_04588334.1| hypothetical protein POR16_13645 [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022728|gb|EGI02785.1| hypothetical protein POR16_13645 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 375 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 57/358 (15%), Positives = 126/358 (35%), Gaps = 29/358 (8%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ R + + ++ + ++ + +S +L I G+ +P L ++ Sbjct: 5 RYLSREVLLTLSAISAVLLVFIMSGRFIKYLAQAASGALDPGVLFMIMGFRLPGFLQVIL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + M +E+ ++ TG S+ L+ + A L+ + + + P+ Sbjct: 65 PLGLFLGILMAYGRMYLESEMTVLAATGMSQQRLLAMTMGPAALVGLVVAWLSFSLAPQG 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYNPNNT-LQGIFI------VD 177 + L + F L F L D I + + + + L G+FI D Sbjct: 125 ATQFSLLINQQDAMTEFDTLVPGRFQALRDGTRITYTKELSEDRSQLGGVFISEKRMSSD 184 Query: 178 SRDTQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + A+ G ++ +IL +G + +P + D ++K+ +Y Sbjct: 185 KSKDNGITVLVAEKGHQEVQPNGSRFLILENGYRYDGNPGAADYRVVKYDTYGAALPKPE 244 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 S + S L +E R++ L I L++I Sbjct: 245 ISEEITDREAIPTSELF----------GSSTPRNVAELQWRISLPLSVFIVTLMAIP--L 292 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFL 351 R RQ + + L + ++ + I+ + + + L L ++ + +I+L Sbjct: 293 SRVNPRQGRYLK-----LLPAILLYMSYLAILISVRSSLEKGKLPLSLGMWWVHAIYL 345 >gi|260596296|ref|YP_003208867.1| lipopolysaccharide ABC transporter permease LptF [Cronobacter turicensis z3032] gi|260215473|emb|CBA27590.1| Lipopolysaccharide export system permease protein lptF [Cronobacter turicensis z3032] Length = 370 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 56/348 (16%), Positives = 128/348 (36%), Gaps = 25/348 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPTNLVLALLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+L I ++ Sbjct: 62 LILPLSLFLALLMTLGRLYTESEITVMHACGLSKAVLVKAAMVLALLTGIIAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + D + + + + +F+ R Sbjct: 122 PWSSRHQDEVLAEAKANPGMAALAQGQFQQATDGNAVLFIESVDGSKFKDVFLAQLRPKG 181 Query: 183 T--HKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I FK Y + Sbjct: 182 NARPSVVVADSGELSQRKDGSQVVTLNQGTRFEGTAMLRDFRITDFKDYQAIIGHQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 A ++ L + + R+EFH RLT ++ L+ + Sbjct: 242 DPDDAEQMDMQTLWQADSKSA----------RAEFHWRLTLVFAVIVMALMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLF 342 RQ + +S+ + ++ F + + N P+++++ Sbjct: 290 NPRQGR-----VLSMLPAMLLYLIFFLLQTSLRSNGAKGKLDPLIWMW 332 >gi|290968957|ref|ZP_06560492.1| YjgP/YjgQ family [Megasphaera genomosp. type_1 str. 28L] gi|290780913|gb|EFD93506.1| YjgP/YjgQ family [Megasphaera genomosp. type_1 str. 28L] Length = 362 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 51/367 (13%), Positives = 118/367 (32%), Gaps = 18/367 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRI-NLVSSSTESLNILLKISGYLIPT 59 M+ + YIL+ FL + L RI ++++ S K+ +P+ Sbjct: 1 MRILDKYILKEFIGPFLFGVCAFTAVFVGTGTLYRIASMINEYGASAAAAAKVLVLALPS 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ + P + ++ +E++++ G + L PVL A +S+ Sbjct: 61 IVVLTFPMSVLLGALMAFGRLSAASEIIVMRAGGQHFVRLAMPVLVAAFFISLGTTAFNE 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIK----ISKYNP-NNTLQGIF 174 + P+ + ++ + +E++ + I +Y+ + I Sbjct: 121 FVVPRANNAYNRIINEEIRHHALPVSQEHVIIKNVHGQNIYGLLYARQYDGTEKEFRDIT 180 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKF--KSYTLQTES 232 + + + ++ A + + I++ G ++ S M F + Sbjct: 181 VQEFEQDRLVRVEKADRAK--WNGKKWIVHQGSIYDVSSNDNTSRTMTFENQELPFMQRP 238 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 K + + L + + E + R L ++ LI Sbjct: 239 EKVQEAQKKPEELTIREL-RQQIRVLTAHGVDVNKLKVEMYNRFALPLASLVCALIGAPL 297 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL---FCISSI 349 + +QR F ++ +++ + + P FL C S Sbjct: 298 GLQ----KQRGSSSIGFGISVVTIFIYYSIMTLADALGNGGTIAPAAAAFLPDIICGSVG 353 Query: 350 FLLMIKK 356 LMI+K Sbjct: 354 IFLMIRK 360 >gi|159903539|ref|YP_001550883.1| putative permease [Prochlorococcus marinus str. MIT 9211] gi|159888715|gb|ABX08929.1| Predicted permease [Prochlorococcus marinus str. MIT 9211] Length = 401 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 63/369 (17%), Positives = 131/369 (35%), Gaps = 21/369 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + ++L + L + ++ V + + + S NI +++ IP L Sbjct: 31 LLDRWLLGELIPPLLFAISAFTVVSLSVGVMFDLVRQIVESGLPFNIAIQVFLLRIPGFL 90 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P M T + ++ N+EL + + G S +I P + LA+L++ FI N I Sbjct: 91 VLSFPMAMLMATLLAYSRLSSNSELKALRSLGVSTKRMIAPAMALALLITSITFIFNNSI 150 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL--------------YIKISKYNPN 167 P + + + + + E++ F + K + Sbjct: 151 VPISNRNSEYILQNSLGKAISNQIGEDIIFSRKGRIDGLKDEKKRKSLTHLFYAGKIDK- 209 Query: 168 NTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 N + + ++D ++ A + + DG + SP + + + KF+SY+ Sbjct: 210 NKISKLTLLDFSKKGYTQMIVANKALWNESKGIWDFIDGMMLTLSP-TGNTTTTKFQSYS 268 Query: 228 LQTESANSS--TIVLKANDQNLSFLLNPNPNNPNYRP-ELLETYRSEFHKRLTQWLFPVI 284 + +I AND +S L + R ++ T + ++ Sbjct: 269 YPLGTGPIKIGSIPKDANDMTVSEALKAEQLYLKSGNIKEARRMRVRIQEKFTLPMACIV 328 Query: 285 FGLISIVAADKRALVR-QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 FGLI K + + + + I + + + FS + P++ +FL Sbjct: 329 FGLIGSTLGAKPSTTTSRSQGFGVSVFLILIYYVLSFSFSSLGVSGALTPFFAAWTPVFL 388 Query: 344 FCISSIFLL 352 FLL Sbjct: 389 SLAGGAFLL 397 >gi|307728896|ref|YP_003906120.1| permease YjgP/YjgQ family protein [Burkholderia sp. CCGE1003] gi|307583431|gb|ADN56829.1| permease YjgP/YjgQ family protein [Burkholderia sp. CCGE1003] Length = 365 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 60/363 (16%), Positives = 131/363 (36%), Gaps = 18/363 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ + +++ + + +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTLVLTTMMIRIVGFAAQGEIDPRDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT +++E+++ ++G S IKP+ A + I + + Sbjct: 62 IMLVATLFVSILFVLTRWYKDSEMVVWLSSGVSLTQFIKPIGMFATPIIILIMFFVFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRL-DDDLYIKISKYNPN-NTLQGIFIVDSRD 180 P K + A+ Q S L F I K +P+ ++ +F+ + + Sbjct: 122 PWSNQQSKLIRARFQQRDEVSLLAPGQFRESAASHRVFFIEKMSPDQGHVENVFVTST-E 180 Query: 181 TQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + +++G + + ++L +G + P D IM+F+ Y ++ ES Sbjct: 181 NGKLNVVVSKNGHTETHKNGDRFVVLENGRRYDGEPGHPDFRIMEFERYGVRIESQPVVN 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA-DKR 296 L+ L NP N +EF R L + L++I A Sbjct: 241 TPTTTGTPTLTLLRNPTKENL-----------AEFAWRAGLPLIAINLMLLAIPLAHQNP 289 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R + + I L+ S + S+I + IL++ + I + + + Sbjct: 290 RRSRTINLVMAVLIYLTYSNLLNVVQSWIEQGKMSFGVGLVILHVIVAGIVAFIFWLRVR 349 Query: 357 KYT 359 Sbjct: 350 NRP 352 >gi|91782195|ref|YP_557401.1| membrane protein, YjgP/YjgQ like [Burkholderia xenovorans LB400] gi|91686149|gb|ABE29349.1| membrane protein, YjgP/YjgQ like protein [Burkholderia xenovorans LB400] Length = 365 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 59/362 (16%), Positives = 132/362 (36%), Gaps = 16/362 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ + +++ + +S +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTLVLTTMMIRIVGFAASGEIDPRDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT +++E+++ ++G S IKP+ A + I + + Sbjct: 62 IMLVATLFVSILFVLTRWYKDSEMVVWLSSGVSLTQFIKPIGIFATPIIILIMFFVFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLD-DDLYIKISKYNPNN-TLQGIFIVDSRD 180 P K + A+ Q S L F I K +P+ ++ +F+ + + Sbjct: 122 PWSNQQSKLIRARFQQRDEVSLLAPGQFRESATSHRVFFIEKMSPDQARVENVFVTSTEN 181 Query: 181 TQTHKIY--YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + + + + + ++L +G + P D IM+F+ Y ++ +S Sbjct: 182 GKVNVVVSKTGHTETRKNGDRFVVLENGRRYDGQPGQPDFRIMEFERYGVKIQSQPVVNT 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA-DKRA 297 L+ L NP +N +EF R L + L++I A Sbjct: 242 PTTTGTPTLTLLRNPTDDNL-----------AEFAWRAGLPLIALNLMLLAIPLAHQNPR 290 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 R + + I L+ S + S+I P + L++ + I + + + Sbjct: 291 RSRTINLVMAVLIYLTYSNLLNVVQSWIEQGKMSFPVGLVGLHVIVAAIVAFIFWLRVRN 350 Query: 358 YT 359 Sbjct: 351 RP 352 >gi|77457217|ref|YP_346722.1| permease YjgP/YjgQ [Pseudomonas fluorescens Pf0-1] gi|77381220|gb|ABA72733.1| putative ABC transport system, membrane protein [Pseudomonas fluorescens Pf0-1] Length = 373 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 60/356 (16%), Positives = 129/356 (36%), Gaps = 26/356 (7%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ R + + ++ I + ++ + ++ L I GY +P + ++ Sbjct: 5 RYLSREVLLTLSAVSAVLLVIIMSGRFIKYLAQAAAGQLDPGSLFLIMGYRLPGFMQLIL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + + +E+ ++ TG S+ L + LF A L+++ + + P+ Sbjct: 65 PLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLFRMTLFPATLVAVVVAWLSLSLAPQG 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYNPNNT-LQGIFIVD-----S 178 + + L K F LE F L D + + + L +FI + Sbjct: 125 ANQFQLLLNKQDALTEFDTLEPGRFQALRDGTRVTYTETLSDDRVNLGSVFISQKNLGAN 184 Query: 179 RDTQTHKIYYAQSGS--IDLDRQ-AIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + + + A+ G + D +IL++G + SP + + +++Y + + Sbjct: 185 QKDRGISVLVAEKGRQEVRPDGNRYLILDNGYRYDGSPGQANYRAIHYETYGVLLPKPDV 244 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 S V + S LL + ++E RL+ L I L+++ Sbjct: 245 SEEVTDRDAMPTSSLLGSDD----------IRSKTELQWRLSLPLLVFIVTLMAVP--LS 292 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 R RQ + + + L + + + P L L+ + +IFL Sbjct: 293 RVNPRQGRFLKLLPAIL--LYMAYLTILIAARGALEKGKIPPAL--GLWWVHAIFL 344 >gi|260363481|ref|ZP_05776317.1| conserved inner membrane protein [Vibrio parahaemolyticus K5030] gi|308112551|gb|EFO50091.1| conserved inner membrane protein [Vibrio parahaemolyticus K5030] Length = 348 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 51/340 (15%), Positives = 121/340 (35%), Gaps = 26/340 (7%) Query: 21 LFIVFIAWVIQ-ILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTS 79 F++F+ +V Q + + S ++ I G +P + ++ P + Sbjct: 1 FFVLFLVFVSQKFISVLADASDGDIPAGLIFSIVGLNMPAMGLLMLPLSLYIGILITFGR 60 Query: 80 MNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLA 139 + +E+++++ TG L++ L+LA++ S + + P + ++ L + Sbjct: 61 LYAESEIVVMNATGIGNKFLVQAALYLALITSGVAAFNALWLSPWSQDRVEHLYEQVAAE 120 Query: 140 LTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT--HKIYYAQSGSIDL- 196 + L++ F D + ++TL +F+ R + + ++ SG + Sbjct: 121 NSVDLLKKGQFQGTPDGSSVVFIDDIKDSTLSNVFVAQMRPRDSVLPSVMFSSSGEVKEL 180 Query: 197 --DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLL-NP 253 RQ I + +G + P + I KF Y + L+ +P Sbjct: 181 SDGRQVITMQEGTRYEGVPTRVEYMITKFDEYEGVIGQREVKQKGRDWEAYPTADLIGHP 240 Query: 254 NPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLS 313 +P ++E R++ + L++++ A+ ++ + + ++ Sbjct: 241 DPE-----------AQAELQWRISL-FVCI--PLLTMLVIPLSAVNPRQGRFAKMGPAIL 286 Query: 314 ISFGVFWGFSYIIHKIEQ-----NPYYIPILYLFLFCISS 348 I F S +E PI + L Sbjct: 287 IYLAYFLAISATKSALEDGAIPAAIGMWPINAMLLIVAIM 326 >gi|169634642|ref|YP_001708378.1| hypothetical protein ABSDF3307 [Acinetobacter baumannii SDF] gi|169797503|ref|YP_001715296.1| hypothetical protein ABAYE3539 [Acinetobacter baumannii AYE] gi|184156573|ref|YP_001844912.1| permease [Acinetobacter baumannii ACICU] gi|213155683|ref|YP_002317728.1| permease YjgP/YjgQ family protein [Acinetobacter baumannii AB0057] gi|239502071|ref|ZP_04661381.1| permease YjgP/YjgQ family protein [Acinetobacter baumannii AB900] gi|260556395|ref|ZP_05828614.1| permease YjgP/YjgQ family protein [Acinetobacter baumannii ATCC 19606] gi|301512956|ref|ZP_07238193.1| permease YjgP/YjgQ family protein [Acinetobacter baumannii AB058] gi|301594832|ref|ZP_07239840.1| permease YjgP/YjgQ family protein [Acinetobacter baumannii AB059] gi|169150430|emb|CAM88327.1| conserved hypothetical protein; putative membrane protein [Acinetobacter baumannii AYE] gi|169153434|emb|CAP02576.1| conserved hypothetical protein; putative membrane protein [Acinetobacter baumannii] gi|183208167|gb|ACC55565.1| predicted permease [Acinetobacter baumannii ACICU] gi|193076099|gb|ABO10703.2| putative membrane protein [Acinetobacter baumannii ATCC 17978] gi|213054843|gb|ACJ39745.1| permease YjgP/YjgQ family protein [Acinetobacter baumannii AB0057] gi|260410450|gb|EEX03749.1| permease YjgP/YjgQ family protein [Acinetobacter baumannii ATCC 19606] Length = 366 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 52/355 (14%), Positives = 128/355 (36%), Gaps = 16/355 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + + L+ + I ++++ + + +IL I GY +P L Sbjct: 2 IIRRYLVKQVVSTSLVVIALLTLIMMGGRLIKYFGVAAQGRLDASILFSIIGYRLPEFLT 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + V + + E+ +++ +G SR L + ++ + ++ + + + Sbjct: 62 LILPLGFFIGLMLVFGRLYVDHEMAVLNGSGVSRHQLARLLIPMTLVYMVCQSVLMLWMT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDS--R 179 P ++L+ + F + F I + + L+ IF + Sbjct: 122 PWGLREFEKLTTTQAVRTGFDLVRPREFISSGP-YTIYAGSLSEDRKNLKDIFFYQRAAK 180 Query: 180 DTQTHKIYYAQSGS----IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + + + A+ + + + L G + P + +F+SY L+ E+ Sbjct: 181 EGKPDVMILAKEATRVEVANDTANVVDLVQGRRYEIFPGQPKYTQAEFQSYRLRLENDKD 240 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + + L N+P RSE RL +I ++S+ ++ Sbjct: 241 VKFESGDVEALSTSKLFSKANDPVV--------RSELGWRLFGPFTIIIALMLSVALSEV 292 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 + ++ P + + I K E + + P+ L +++F Sbjct: 293 SPRQGRYYRLIPSIFIFASLIVLMIAIKTRISKGELDIWAYPVALLVYAIAAALF 347 >gi|256829583|ref|YP_003158311.1| permease YjgP/YjgQ family protein [Desulfomicrobium baculatum DSM 4028] gi|256578759|gb|ACU89895.1| permease YjgP/YjgQ family protein [Desulfomicrobium baculatum DSM 4028] Length = 392 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 64/369 (17%), Positives = 130/369 (35%), Gaps = 21/369 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + + + +G +S + + + ++LQ +L + L+K+ YL P L Sbjct: 6 LLQRELFKEMGIVASISLGGFLSLILLGRLLQLRDLFMGQGVTFFDLVKLFTYLSPFFLI 65 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M+ P + M + EL+ + G S L+ L L +L S Sbjct: 66 MLIPVSCMLGVFLTFLRMGADRELISLRAGGVSLWPLLPAPLLLCLLCSALTVWISLSGI 125 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSRDT 181 + + T ++ +F L + + +P L +F++DS + Sbjct: 126 SWGMDNFRNTVVELARNKTSVNVQPGVFNTSFPGLTVYARQSDPGSGALLDVFVLDSSRS 185 Query: 182 QTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESAN--- 234 +T A G I+ D + + L DG V+R+ ++S++ F+SY L + Sbjct: 186 KTRATIVAPLGRIESDSERGQVFVRLEDGHVYREQ--GGELSVISFESYILSLDMTRLLG 243 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRS--EFHKRLTQWLFPVIFGLISIVA 292 + KA + L + + R E HKR + ++ + A Sbjct: 244 GFELKDKAPKEMSWDDLRTLKGDGFEDRSVNFQRRVDIELHKRFSLPAACIV---LGFFA 300 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL-----FCIS 347 + K+ + L F +++ F + + P L L+L + Sbjct: 301 LPLAFFFQGMKRQFGLIACLGT-FFLYYVFLSGGMALAEGGIIAPALALWLPNVVFMLAA 359 Query: 348 SIFLLMIKK 356 I + ++ Sbjct: 360 GIGMWLVAA 368 >gi|254481219|ref|ZP_05094464.1| putative permease, YjgP/YjgQ family [marine gamma proteobacterium HTCC2148] gi|214038382|gb|EEB79044.1| putative permease, YjgP/YjgQ family [marine gamma proteobacterium HTCC2148] Length = 369 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 54/363 (14%), Positives = 121/363 (33%), Gaps = 22/363 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+ + + ++ I + ++ + + + IL+ + Y +P Sbjct: 1 MKIL-RYLALDVLVHMVAVSFVLLVIIISGRFVKYLAEAAVGDLAAGILVPVLLYRLPGF 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + + +E++I TG S L L A+L+ + + Sbjct: 60 MELIIPLGLFIGILMSYGRLYVESEMVIFTATGISPQRLAGYTLVPALLVMVIVGGLSLF 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF-FRLDDDLYIKISKYNPNNTLQGIFIVD-S 178 I P + + L + + + L F R +D+ + N + +F+ Sbjct: 120 ISPLGAARSEALLHAPESSQGINALAAGRFQTRRSNDMVSYAQAVDANGVMHSVFLSQAE 179 Query: 179 RDTQTHKI---YYAQSGSIDLD----RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 R+ A G + D + + L +G + P D ++ F+ + Sbjct: 180 REDDGELTMLLTIASEGEVKFDSATGARYLELRNGVRYVGYPGDLDYQVVSFEQFGELIP 239 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 D + L ELLE ++ H RL+ PV+ +++I+ Sbjct: 240 EPEGGVRTADPVDGRTTAHL--------LSSELLED-KAALHWRLS---IPVMVPIVAII 287 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 A +R + + + + G + I ++ ++ L Sbjct: 288 AMCMSHTNHRRGRYIKMAPAFILYLGYLTLLANARSGIASGEGGTVNIWAVHALFLAVAL 347 Query: 352 LMI 354 M+ Sbjct: 348 AML 350 >gi|330818019|ref|YP_004361724.1| Permease, putative [Burkholderia gladioli BSR3] gi|327370412|gb|AEA61768.1| Permease, putative [Burkholderia gladioli BSR3] Length = 363 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 61/367 (16%), Positives = 137/367 (37%), Gaps = 22/367 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ I +++ + +S S +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTIMLTSMMIRIVGYAASGQVSPKDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M+ + VLT +++E+++ +G S LIKP+ A + + + + Sbjct: 62 MILVGTLFVSILFVLTRWYKDSEMVVWLASGVSLTRLIKPIGVFATPIILLIAFFAFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFR-LDDDLYIKISKYNPNN-TLQGIFIVDSRD 180 P K + A+ Q S L F + I K + + +Q +F+ + Sbjct: 122 PWSNQQSKLIKARFQQRDEVSLLAPGQFRESPSTNRVFFIEKMSADQAAVQNVFVTTTEQ 181 Query: 181 TQTHKIY--YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + + + + + I+L +G + P + IM+F+ Y ++ +S T Sbjct: 182 GKVNVVVSQTGHTETAQNGDRFIVLENGRRYDGVPGQPNFKIMQFERYGVKIQSKQVVTQ 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + L L +P N +EF R+ L + +++I A Sbjct: 242 PTTTSTPTLDLLRDPTDENL-----------AEFAWRVGLPLIAINLMILAIPLA---YQ 287 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN----PYYIPILYLFLFCISSIFLLMI 354 +R + + +++ I + + +IE+ + +L+L + I + M Sbjct: 288 NPRRGRTVNLVMAVLIYLTYSNLLNVMQSQIERGKIPFGVGLVVLHLVVAGIVAFLFWMR 347 Query: 355 KKKYTKI 361 + I Sbjct: 348 VRNRPLI 354 >gi|170692022|ref|ZP_02883186.1| permease YjgP/YjgQ family protein [Burkholderia graminis C4D1M] gi|170143306|gb|EDT11470.1| permease YjgP/YjgQ family protein [Burkholderia graminis C4D1M] Length = 365 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 60/363 (16%), Positives = 132/363 (36%), Gaps = 18/363 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ + +++ + + +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTLVLTTMMIRIVGFAAQGEIDPRDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT +++E+++ ++G S IKP+ A + I + + Sbjct: 62 IMLVATLFVSILFVLTRWYKDSEMVVWLSSGVSLTRFIKPIGMFATPIIILICFFVFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLD-DDLYIKISKYNPN-NTLQGIFIVDSRD 180 P K + A+ Q S L F I K +P+ ++ +F+ + + Sbjct: 122 PWSNQQSKMIRARFQQRDEVSLLAPGQFRESASSHRVFFIEKMSPDQGHVENVFVTSTEN 181 Query: 181 TQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + +++G + + ++L +G + P D IM+F+ Y ++ ES Sbjct: 182 GKV-NVVVSKNGHTETHKNGDRFVVLENGRRYEGEPGHPDFRIMEFERYGVKIESQPVVN 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA-DKR 296 L+ L NP N +EF R L + L++I A Sbjct: 241 TPTTTGTPTLTLLRNPTQVNL-----------AEFAWRAGLPLIAINLMLLAIPLAHQNP 289 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R + + I L+ S + S+I + IL++ + I + + + Sbjct: 290 RRSRTINLVMAVLIYLTYSNLLNVVQSWIEQGKMSFALGLVILHVIVAAIVAFIFWLRVR 349 Query: 357 KYT 359 Sbjct: 350 NRP 352 >gi|37522902|ref|NP_926279.1| hypothetical protein gvip459 [Gloeobacter violaceus PCC 7421] gi|35213904|dbj|BAC91274.1| ycf84 [Gloeobacter violaceus PCC 7421] Length = 384 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 49/374 (13%), Positives = 139/374 (37%), Gaps = 24/374 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQIL-QRINLVSSSTESLNILLKISGYLIPT 59 +K +LY++ + FL + ++ L + + + + S+ + ++ +P+ Sbjct: 14 LKIVDLYLVSELLLPFLFGVATFASLGMIVGSLFELVRAMLDNGLSVTVAAQVFALRLPS 73 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 V+ + P + T ++ + E + + G S L+ P L + +L++ F+ Sbjct: 74 VIVITFPTAMLLATLLAYARLSGDAETVAMRACGMSVYRLVLPALAVGLLVTGATFMCNE 133 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENL------FFRLDDDL--------YIKISKYN 165 ++ P + +L +A + ++N+ F D ++ Sbjct: 134 LVVPASNAEASRLLFQAIDRDKPDFQKDNIIYPEYGFVTPRDGRPTYHTLVRLFYARQF- 192 Query: 166 PNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKS 225 ++ + ++D +++ A + D + L DG V+ +P ++++FK Sbjct: 193 AGGIMRELTVLDYSQDAINQVITAAAAVYDNRSGSWTLQDGTVYVVAPDGSYRNVLRFKR 252 Query: 226 YTLQTESANSS-TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVI 284 ++ + D ++ L + + ++ T + ++ + + Sbjct: 253 QQVKLSERPEQFGGGARPEDLPIAQLSDYIRRLELSQQQV-RTLQVSLQQKYAIPVTCFV 311 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLF 342 F L+ +R + + +S+ I FG + ++ + Q P L + Sbjct: 312 FALVGATLGLRRV---RTSNALGLGLSILIIFGYYL-LMFVAQALGQTGVIAPWLGAWAP 367 Query: 343 LFCISSIFLLMIKK 356 ++ +L++ + Sbjct: 368 NLATGALGVLLLWR 381 >gi|312795337|ref|YP_004028259.1| hypothetical protein RBRH_03151 [Burkholderia rhizoxinica HKI 454] gi|312167112|emb|CBW74115.1| Hypothetical membrane spanning protein [Burkholderia rhizoxinica HKI 454] Length = 365 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 56/370 (15%), Positives = 140/370 (37%), Gaps = 32/370 (8%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 E + R + + L ++ + +++ + +S ++ + G + + + Sbjct: 2 ILERSLQRELAYTAGAVFLVLLTLVLTTMMIRIVGFAASGQIDPRDVVVLIGLTMISYVA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT R++E+++ + G S LIKP+ A + + + + Sbjct: 62 VMLIATLFVSILFVLTRWYRDSEMVVWLSCGVSLTRLIKPIATFAAPIVVLIAFFAFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPN-NTLQGIFIVDSRD 180 P K + + Q S L F + I K +P+ ++ +F+ + + Sbjct: 122 PWANEQSKLIRERFQQRDEVSLLAPGQFRESAANHRVFFIEKMSPDQGRVENVFVTSTEN 181 Query: 181 TQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + +++G ++ ++L +G + P D IM+F Y ++ +S Sbjct: 182 GKV-NVVVSKTGHTEIHPNGDRFVVLENGRRYDGEPGKPDFRIMEFARYGVKIQSRQLVN 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + L PNP T+ +EF R L + L++I A Sbjct: 241 RPTTTSLPTATLLREPNP-----------THLAEFAWRAGLPLTALNLMLLAIPLA--YQ 287 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-----NPYYIP---ILYLFLFCISSI 349 R+ + I+ L ++ ++ +S +++ ++ ++P L++ + I Sbjct: 288 NPRRGRTIN-----LVLAVLIYLTYSNLMNLVQAWIEQGKVAFVPGLLGLHVIVSAIVVF 342 Query: 350 FLLMIKKKYT 359 + + Sbjct: 343 VFWLRVRNRP 352 >gi|145641036|ref|ZP_01796617.1| predicted permease [Haemophilus influenzae R3021] gi|145274197|gb|EDK14062.1| predicted permease [Haemophilus influenzae 22.4-21] Length = 336 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 47/325 (14%), Positives = 121/325 (37%), Gaps = 20/325 (6%) Query: 33 LQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNT 92 ++ + ++ +++ + G +PT+ ++ P C + + +E+ ++ Sbjct: 1 MRVLGAAANGNVPADLVFSLLGLGMPTMAQLMLPLCLFIAILLTFGRLYAESEITVMRAC 60 Query: 93 GTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFR 152 G + L+K L +++L + + + P + A+ T L F Sbjct: 61 GVGQRILVKVALIMSLLTAGIAAYNALWLSPWAIQKQVNMVEDAKANPTVGVLSSGQFIS 120 Query: 153 LDDDLYIKISKYNPNNTLQGIFIVDS--RDTQTHKIYYAQSGSID---LDRQAIILNDGE 207 +++ + +N ++ +++ + + A+ G + Q + L + + Sbjct: 121 TNNNNVVLFIDKIKDNQIRNVYLFQMTPQKQTKPSVITAEKGELIALPNGDQVLNLKNTK 180 Query: 208 VHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLET 267 + + D I F Y ++ + + LS L++ + ++ Sbjct: 181 RVEGTSVLPDFRITHFDEYQAYLGYQSAENTNDEVAELTLSQLIDLDSSSA--------- 231 Query: 268 YRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK--KIHPIFISLSISFGVFWGFSYI 325 ++E H R+T L + LI++ R RQ + KI P + I F + F Sbjct: 232 -KAELHWRITLILAVPLMALIAVP--LSRVNPRQGRFAKILPALLLYLIYFLLQSSFKSA 288 Query: 326 IHKIE-QNPYYIPILYLFLFCISSI 349 + + IP++ + F ++ + Sbjct: 289 GSAGKLEAELLIPLVNIGFFLLAVV 313 >gi|254447192|ref|ZP_05060659.1| permease YjgP/YjgQ family protein [gamma proteobacterium HTCC5015] gi|198263331|gb|EDY87609.1| permease YjgP/YjgQ family protein [gamma proteobacterium HTCC5015] Length = 353 Score = 140 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 51/366 (13%), Positives = 140/366 (38%), Gaps = 24/366 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y++R + +S L ++ + ++Q ++ + + + + + Sbjct: 1 MHITDRYLIREVAKSSAAVLLVLLVLMVGNTLVQLLSDAADGNMAPQYIWPLLVITLANY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + + + ++ E+ + G +P+ +AI +S+ + Sbjct: 61 LVLFMGLSLYLGGMLAFGRLYKDAEMAAMVACGMGPWDFFRPLFKVAIPISLAGLVLSVF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + ++ A+ ++L E F L + ++ + L +F+ SRD Sbjct: 121 ILPWMAGLQAKFTSDAEKPSVETHLREGEFNELGNGIFFV--EEQSGGALSQVFVY-SRD 177 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 I A+SG ++ + L G +++ + + I ++++ Y + ES N+ Sbjct: 178 PSGESIQVAESGRVEDAPSGYELTLQQGRLYQINTE-QRIRDIRYQEYEVMVESPNAVVD 236 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 S L+ + +E+ RL+ P+ L++++A Sbjct: 237 EQVLAATQTSDLMRSDNPLEV----------AEWQWRLSV---PIGCLLLAVLAFPLSYT 283 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN---PYYIPILYLFLFCISSIFLLMIK 355 ++ + ++ + ++ F + + QN P ++ + + L ++ I L+++ Sbjct: 284 SPRKGAFSKLGYAILVYI-LYSNFLSLGRSLVQNQEVPLWLGMWWAHLPVLALIIGLLLR 342 Query: 356 K-KYTK 360 + + + Sbjct: 343 RYGWPR 348 >gi|209526011|ref|ZP_03274544.1| permease YjgP/YjgQ family protein [Arthrospira maxima CS-328] gi|209493537|gb|EDZ93859.1| permease YjgP/YjgQ family protein [Arthrospira maxima CS-328] Length = 392 Score = 140 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 54/379 (14%), Positives = 130/379 (34%), Gaps = 30/379 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPT 59 + + YI++ + F+ + V + + + V+ S +++ ++ +P Sbjct: 19 LSVLDRYIIQELIPPFIFGVGLFTSVAVTVGTVFELVRRVAESGLPVSVAFQVFLLKMPD 78 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + + P + T V ++ ++EL+ I + G S L+ P + + ++ F Sbjct: 79 FMVLAFPMSMILTTLMVYGRLSSDSELIAIRSCGISLYRLVIPAIIFSFFVTGMTFAFNE 138 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLY--------------IKISKYN 165 II P KA + N+FF + + ++ Sbjct: 139 IIVPAANFQATITLQKALNEDALNIRSTNIFFPEYERVSVEGTNRRVNVLRRLFYAEEF- 197 Query: 166 PNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKS 225 + + G+ I+D +I +++ + + +G V+ P +I +F Sbjct: 198 ADGKMSGVTILDRSRAGITQIISSRTAIWNPEESTWDFYNGTVYIVDPDGSYRNIARFDH 257 Query: 226 YTLQTE--SANSSTIVLKANDQNLS---FLLNPNPNNPNYRPELLETYRSEFHKRLTQWL 280 L + ++ + N++ L + + L R + ++ Sbjct: 258 KQLYLSRVPLDLASQDRDYGEMNIAQTKEYLELMKLSGDQAKILKTKVRIQ--QKYALPF 315 Query: 281 FPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY 340 V+FGL+ + + + IS+ I F + S+I + Q P + Sbjct: 316 VCVVFGLLGSSLGSRPG---RTNRATSFGISVMIIFAYYL-LSFITGAMGQKGILSPFMA 371 Query: 341 LFL---FCISSIFLLMIKK 356 +L + L+ + Sbjct: 372 AWLPTMLGLGVSGFLLYRS 390 >gi|241761653|ref|ZP_04759740.1| permease YjgP/YjgQ family protein [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260754018|ref|YP_003226911.1| permease YjgP/YjgQ family protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283856464|ref|YP_163128.2| permease YjgP/YjgQ family protein [Zymomonas mobilis subsp. mobilis ZM4] gi|241373961|gb|EER63494.1| permease YjgP/YjgQ family protein [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258553381|gb|ACV76327.1| permease YjgP/YjgQ family protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283775468|gb|AAV90017.2| permease YjgP/YjgQ family protein [Zymomonas mobilis subsp. mobilis ZM4] Length = 403 Score = 140 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 42/359 (11%), Positives = 121/359 (33%), Gaps = 12/359 (3%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + Y++R I + + + + + ++L+ + V++ ++++ ++ ++P + + Sbjct: 7 IDRYLIRLITVPLVTTLIVSAMLMVLDKMLKLFDFVANQGGPVSVVWRMLANMLPEYMSL 66 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + + +EL + G S L++ A ++ IEP Sbjct: 67 GIPIGLTLGILLAFRKLALQSELDVFRAVGISYSRLLRIPYIFAFFFALVNLAIVGYIEP 126 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKI-SKYNPNNTLQGIF-IVDSRDT 181 + L + + + ++ F +L + +++ + L GIF ++ + Sbjct: 127 YSHYAYEDLRYELRSGALGAAIKVGEFTKLGTHMTLRVEGSQDSGRNLSGIFGTSENPEN 186 Query: 182 QTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 A +G + LN G + P ++ F+++ + + + Sbjct: 187 GQKLTVTADNGRFMPSDDPNVILLRLNHGLLIHNRPDFTTPRVLTFENHDMPIKLPAVES 246 Query: 238 IVLKA---NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + + L+ L + + +L ++ H RL + + ++++ A Sbjct: 247 FRGRDGNQQEMTLTELFFIL-HQKHLPKKLRNQLQANLHFRLVEVATMFLLPMLALTLAI 305 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 R + L + + +++L S + M Sbjct: 306 PPK--RSTSSLGVFLSILILVTDHKLNQYCQTIGGLGKINPVLMMWLPFILFSLLVWRM 362 >gi|282897128|ref|ZP_06305130.1| permease YjgP/YjgQ [Raphidiopsis brookii D9] gi|281197780|gb|EFA72674.1| permease YjgP/YjgQ [Raphidiopsis brookii D9] Length = 391 Score = 140 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 52/369 (14%), Positives = 131/369 (35%), Gaps = 18/369 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + Y+ + FL + + + + + V S +NI LK+ +P V Sbjct: 19 SIMDRYLAMQLLPIFLFGVGAFTSVVLAIDSLFELLRKVVESGLPINIALKVFVLKLPYV 78 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + T + ++ ++EL+ + G S ++ + L+ L++ ++ Sbjct: 79 MVYSFPMSTLLATLMTYSKLSSDSELIALRGCGVSVYRMVLTAVLLSGLVTGMTYVFNEY 138 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFF------RLDDDLY-------IKISKYNPN 167 I P +A + S+ +EN+++ + D +++ Sbjct: 139 ISPAANYEASITLEQALKSDQPSFKQENIYYPEYREEKTKDGGTSRLLARLFYADEFD-G 197 Query: 168 NTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 ++G+ I+D ++I ++S + +Q +G ++ +P +I++F+ Sbjct: 198 KKMKGLTIIDRSKAGVNQIVVSESAQWNAYKQVWDFYNGTIYLVAPDRSYRNILRFEHQQ 257 Query: 228 LQTESANS--STIVLKANDQNLSFLLNPNP-NNPNYRPELLETYRSEFHKRLTQWLFPVI 284 L+ S + + N++ L P+ ++ +++ +I Sbjct: 258 LKLPSTPLIVAKNSRDYEEMNIAQSLQQLEIEKLAGNPQRIKKLEVRIQQKIAFPFICII 317 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 FGL+ + + I + I + + + +P+ L Sbjct: 318 FGLVGSAMGTIPQRTGRGRSFGVSIIVIFIYYLLLSVCGALAQAEILSPFVGAWLPNLCG 377 Query: 345 CISSIFLLM 353 I +LM Sbjct: 378 LGMGIVILM 386 >gi|197336301|ref|YP_002155170.1| permease YjgP/YjgQ family protein [Vibrio fischeri MJ11] gi|197317791|gb|ACH67238.1| permease YjgP/YjgQ family protein [Vibrio fischeri MJ11] Length = 344 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 49/316 (15%), Positives = 110/316 (34%), Gaps = 22/316 (6%) Query: 47 NILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFL 106 ++L + G +P + ++ P + + +E+ +++ TG LI+ L+L Sbjct: 20 GLILSLVGLNMPAMGLLMLPLSIFIGILLTFGRLYAESEITVMNATGMGNSILIRAALYL 79 Query: 107 AILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYN 165 A++ + + P + QL + L++ F R D + I + Sbjct: 80 ALITGAAATFNSLWLSPWSQEKTTQLMETVESDAGVDLLQKGQFQRSPDGKAVVFIDDIS 139 Query: 166 PNN--TLQGIFIVD--SRDTQTHKIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDI 218 N L+ IF+ D+ + A G + RQ + L DG + P D Sbjct: 140 NKNGKELRHIFLAQPVPHDSLRPSVLVADKGVVKELKDGRQVLELQDGTRYEGIPTRLDY 199 Query: 219 SIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQ 278 FKSY + + L+ ++E R++ Sbjct: 200 LESNFKSYEVLIGQKEVKEKRRDWDAIPTLDLM----------KRPELEAKAELQWRISL 249 Query: 279 WLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 + + L+++V A+ ++ + + ++ + F S ++ P Sbjct: 250 -IICI--PLLTMVVVPLSAVNPRQGRFAKLGPAVLLYLAYFLSLS-AGKSAIEDGGLAPS 305 Query: 339 LYLFLFCISSIFLLMI 354 + L+ + + + +I Sbjct: 306 IGLWAINATLLLVGII 321 >gi|59711021|ref|YP_203797.1| inner membrane protein [Vibrio fischeri ES114] gi|59479122|gb|AAW84909.1| conserved inner membrane protein [Vibrio fischeri ES114] Length = 344 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 48/313 (15%), Positives = 108/313 (34%), Gaps = 22/313 (7%) Query: 47 NILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFL 106 ++L + G +P + ++ P + + +E+ +++ TG LI+ L+L Sbjct: 20 GLILSLVGLNMPAMGLLMLPLSIFIGILLTFGRLYAESEITVMNATGMGNSILIRAALYL 79 Query: 107 AILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYN 165 A++ + + P + QL + L++ F R D + I + Sbjct: 80 ALITGAAATFNSLWLSPWSQEKTTQLMETVESDAGVDLLQKGQFQRSPDGKAVVFIDDIS 139 Query: 166 PNN--TLQGIFIVD--SRDTQTHKIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDI 218 N L+ IF+ D+ + A G + RQ + L DG + P D Sbjct: 140 NKNGKELRHIFLAQPVPHDSLRPSVLVADKGVVKELKDGRQVLELQDGTRYEGIPTRLDY 199 Query: 219 SIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQ 278 FKSY + + L+ ++E R++ Sbjct: 200 LESNFKSYEVLIGQKEVKEKRRDWDAIPTLDLM----------KRPELEAKAELQWRISL 249 Query: 279 WLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 + + L+++V A+ ++ + + ++ + F S ++ P Sbjct: 250 -IICI--PLLTMVVVPLSAVNPRQGRFAKLGPAVLLYLAYFLSLS-AGKSAIEDGGLAPS 305 Query: 339 LYLFLFCISSIFL 351 + L+ + + + Sbjct: 306 IGLWAINATLLLV 318 >gi|261253953|ref|ZP_05946526.1| predicted permease [Vibrio orientalis CIP 102891] gi|260937344|gb|EEX93333.1| predicted permease [Vibrio orientalis CIP 102891] Length = 368 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 55/359 (15%), Positives = 127/359 (35%), Gaps = 27/359 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L + + ++++ + S ++++ +P++ Sbjct: 2 IIVRYLIRETLKSQLAIFFILFLVFLSQKLIKVLADASDGDIPASLVMHYVALSMPSMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LA++ + + Sbjct: 62 LMLPLSLFLGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLAVITGLIAGFNSFYFA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNTLQGIFIVDS--R 179 P + + QL + + + L++ F D + I + L+ +F+ R Sbjct: 122 PYSQDKLVQLQEEVEAENSVDLLKKGQFQGTPDGSSVVFIDDID-GKQLKHVFVAQMRPR 180 Query: 180 DTQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 D+ + ++QSG + RQ I + DG + P D + +F Y + Sbjct: 181 DSILPSVSFSQSGEVKELSDGRQVIRMYDGTRYEGVPTRVDYMVTEFDQYEGLIGQRDVQ 240 Query: 237 TIVLKANDQNLSFLL-NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 L+ NP+P ++E R++ V L++++ Sbjct: 241 RKGRDWEALPTMDLMKNPDP-----------RAQAELQWRIS---LVVCIPLLTMLVVPL 286 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP-----YYIPILYLFLFCISSI 349 A+ ++ + + ++ I F S +E PI L I Sbjct: 287 SAVNPRQGRFAKMGPAILIYLAYFLSISATKSALEDGTIPTMVGMWPINAALLLTALGI 345 >gi|296162276|ref|ZP_06845070.1| permease YjgP/YjgQ family protein [Burkholderia sp. Ch1-1] gi|295887430|gb|EFG67254.1| permease YjgP/YjgQ family protein [Burkholderia sp. Ch1-1] Length = 365 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 59/362 (16%), Positives = 132/362 (36%), Gaps = 16/362 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ + +++ + +S +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTLVLTTMMIRIVGFAASGEIDPRDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT +++E+++ ++G S IKP+ A + I + + Sbjct: 62 IMLVATLFVSILFVLTRWYKDSEMVVWLSSGVSLTQFIKPIGIFATPIIILIMFFVFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLD-DDLYIKISKYNPNN-TLQGIFIVDSRD 180 P K + A+ Q S L F I K +P+ ++ +F+ + + Sbjct: 122 PWSNQQSKLIRARFQQRDEVSLLAPGQFRESATSHRVFFIEKMSPDQARVENVFVTSTEN 181 Query: 181 TQTHKIY--YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + + + + + ++L +G + P D IM+F+ Y ++ +S Sbjct: 182 GKVNVVVSKTGHTETRKNGDRFVVLENGRRYDGQPGQPDFRIMEFERYGVKIQSQPVVNT 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA-DKRA 297 L+ L NP +N +EF R L + L++I A Sbjct: 242 PTTTGTPTLTLLRNPTNDNL-----------AEFAWRAGLPLIALNLMLLAIPLAHQNPR 290 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 R + + I L+ S + S+I P + L++ + I + + + Sbjct: 291 RSRTINLVMAVLIYLTYSNLLNVVQSWIEQGKMSFPVGLVGLHVIVAAIVAFIFWLRVRN 350 Query: 358 YT 359 Sbjct: 351 RP 352 >gi|260771005|ref|ZP_05879934.1| predicted permease [Vibrio furnissii CIP 102972] gi|260614242|gb|EEX39432.1| predicted permease [Vibrio furnissii CIP 102972] Length = 347 Score = 140 bits (353), Expect = 4e-31, Method: Composition-based stats. Identities = 44/338 (13%), Positives = 116/338 (34%), Gaps = 19/338 (5%) Query: 22 FIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMN 81 + + + ++ + S ++L I G +P + ++ P + + Sbjct: 1 MLFLVFLSQKFIRVLADASDGEIPARLILSIVGLNMPAMGLLMLPLSLYIGILLTFGRLY 60 Query: 82 RNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALT 141 +E+ +++ TG LI+ L+L ++ S + + P + ++ + + + Sbjct: 61 AESEITVMNATGIGNKFLIRAALYLGVITSCLAGFNALWLSPWSQDKVQSVMEQLAAENS 120 Query: 142 FSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RDTQTHKIYYAQSG---SIDL 196 L++ F R D + N L +F+ R++ + ++ +G + Sbjct: 121 VDLLQKGQFQRSPDGSSVVFIDNIENKKLSNVFVAQLTPRESILPSVMFSDAGDVKELSD 180 Query: 197 DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPN 256 RQ I + +G + P D + KF Y L+ Sbjct: 181 GRQVITMYNGTRYEGVPTRVDYMVTKFDEYEGLIGQRAVKEKGRDWEAIPTLELI----- 235 Query: 257 NPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISF 316 + ++E R++ V L++++ A+ ++ + + ++ I Sbjct: 236 -----KNADRSAQAELQWRIS---LVVCIPLLTMLVVPLSAVNPRQGRFAKMGPAILIYL 287 Query: 317 GVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 F S ++ I+ ++ + + +I Sbjct: 288 TYFLAIS-ATKSALEDGSIPAIVGMWPINAALLISAII 324 >gi|186476977|ref|YP_001858447.1| permease YjgP/YjgQ family protein [Burkholderia phymatum STM815] gi|184193436|gb|ACC71401.1| permease YjgP/YjgQ family protein [Burkholderia phymatum STM815] Length = 370 Score = 140 bits (353), Expect = 4e-31, Method: Composition-based stats. Identities = 56/363 (15%), Positives = 129/363 (35%), Gaps = 18/363 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ + +++ + +S +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTLVLTTMMIRIVGFAASGEIDPRDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT +++E+++ +G S I+P+ A + I + + Sbjct: 62 IMLVATLFVSILFVLTRWYKDSEMVVWLASGVSLARFIRPIGVFATPIIILIAFFVFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRL-DDDLYIKISKYNPN-NTLQGIFIVDSRD 180 P K + A+ Q S L F I K +P+ ++ +F+ + + Sbjct: 122 PWSNQQSKLIRARFQQRDEVSLLAPGQFRESAASHRVFFIEKMSPDQGHVENVFVTSTEN 181 Query: 181 TQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + +++G + + ++L +G + P D IM+F+ Y ++ +S + Sbjct: 182 GKV-NVVVSKNGHTETHKNGDRFVVLENGRRYDGEPGHPDFRIMEFERYGVKIQSQPVVS 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA-DKR 296 L +P N +EF R L + L++I A Sbjct: 241 TPTTTGTPTLDLFRDPTRQNL-----------AEFAWRAGLPLIAINLMLLAIPLAHQNP 289 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R + + I L+ S + S+I + L++ + I + + Sbjct: 290 RRSRTINLVMAVLIYLTYSNLLNVVQSWIEQGKMSFGVGLVGLHILVALIVVFIFWLRVR 349 Query: 357 KYT 359 Sbjct: 350 NRP 352 >gi|262376976|ref|ZP_06070202.1| permease YjgP/YjgQ family protein [Acinetobacter lwoffii SH145] gi|262308014|gb|EEY89151.1| permease YjgP/YjgQ family protein [Acinetobacter lwoffii SH145] Length = 366 Score = 140 bits (353), Expect = 4e-31, Method: Composition-based stats. Identities = 53/355 (14%), Positives = 126/355 (35%), Gaps = 16/355 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + + L+ + I ++++ + + IL I GY +P L Sbjct: 2 IIRRYLVKQVVSTSLVVIALLTLIMMGGRLIKYFGVAAQGRLDAGILFSIIGYRLPEFLT 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + V + + E+ +++ +G SR L + ++ + ++ I Sbjct: 62 LILPLGFFIGLMLVFGRLYVDHEMAVMNGSGVSRHQLARLLVPMTLVFLIAQAGLMLWAA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSRDT 181 P + L+ + F + F I + + L+ IF + Sbjct: 122 PWGIRQFEALTTSQAVRTGFDLVRPKEFISSGP-YTIYAGDLSEDRKNLKDIFFYQRAEK 180 Query: 182 QT--HKIYYAQSGS---IDLDRQAII-LNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + + AQ + + D ++ L +G + P + + +F+SY L+ ES Sbjct: 181 EGKPDVMILAQEATRIEVPNDAANVVDLVNGRRYEIYPGTPQYTQAEFESYRLRLESDEE 240 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + + + L N +P SE R+ +I ++++ ++ Sbjct: 241 AQFASTEVEALPTSQLWQNRQDPVVA--------SELGWRVFVPFAILIALILAVALSEV 292 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 + K+ P + + I K E + P++ + ++F Sbjct: 293 SPRQGRYLKLFPALMIFASLIVALMAVKTRISKEEMGIWAYPLILIAYAIAGALF 347 >gi|293390144|ref|ZP_06634478.1| 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase [Aggregatibacter actinomycetemcomitans D7S-1] gi|290950678|gb|EFE00797.1| 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase [Aggregatibacter actinomycetemcomitans D7S-1] Length = 372 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 60/357 (16%), Positives = 125/357 (35%), Gaps = 19/357 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + I +S + ++ I + Q+++ + ++ +++ + G +PT+ Sbjct: 6 ILTRYLTKEIFKSQIAILFILLLIFFCQQLVRVLGSAANGKVPADLVFSLLGLGMPTMAQ 65 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P C + L + +E+ ++ G + L+K VL L++L S + + Sbjct: 66 LMLPLCLFIAILLTLGRLYAESEITVMRACGVGQPILVKVVLLLSLLTSGVAAYNALWLT 125 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIKISKYNPNNTLQGIFIVDS--R 179 P ++ A+ L F ++ D + I NN + +++ + R Sbjct: 126 PWAIHKQTEIVEDAKANPNVGALSAGQFVSANNSDFVLFIDDI-QNNQINNVYVFQTQPR 184 Query: 180 DTQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + A+ G + Q + L + E + D I F Y + Sbjct: 185 GQSKPSVIVAEKGELKALPNGDQVLNLQNSERFEGTAALPDFRITHFDEYQAYLGHKAVN 244 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 +A + +LS LLN ++EFH RLT L I L+++ R Sbjct: 245 DDSAEAEELSLSQLLN----------TKTPAAKTEFHWRLTLILAVPIMALLAVP--LSR 292 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 RQ + + L S + L + +L+ Sbjct: 293 VNPRQGRFAKVLPALLLYLIYFLLQSSLKSAGGAGKLDAGLFMPLVNIVFFLLAILL 349 >gi|299771880|ref|YP_003733906.1| permease YjgP/YjgQ family protein [Acinetobacter sp. DR1] gi|298701968|gb|ADI92533.1| permease YjgP/YjgQ family protein [Acinetobacter sp. DR1] Length = 366 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 52/355 (14%), Positives = 128/355 (36%), Gaps = 16/355 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + + L+ + I ++++ + + +IL I GY +P L Sbjct: 2 IIRRYLVKQVVSTSLVVISLLTLIMMGGRLIKYFGVAAQGRLDASILFSIIGYRLPEFLT 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + V + + E+ +++ +G SR L + ++ + ++ + + + Sbjct: 62 LILPLGFFIGLMLVFGRLYVDHEMAVLNGSGVSRHQLARLLIPMTLVYMVCQSVLMLWMT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDS--R 179 P ++L+ + F + F I + + L+ IF + Sbjct: 122 PWGLREFEKLTTTQAVRTGFDLVRPREFISSGP-YTIYAGSLSEDRKNLKDIFFYQRATK 180 Query: 180 DTQTHKIYYAQSGS----IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + + + A+ + + + L G + P + +F+SY L+ E+ Sbjct: 181 EDKPDVMILAKEATRVEVANDTANVVDLVQGRRYEIFPGQPKYTQAEFQSYRLRLENDKD 240 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + + L N+P RSE RL +I ++S+ ++ Sbjct: 241 VKFESGDVEALSTTKLFSKTNDP--------VIRSELGWRLFGPFTIIIALMLSVALSEV 292 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 + ++ P S + I K E + + P + + +++F Sbjct: 293 SPRQGRYYRLIPAIFIFSSLIVLMIAIKTRISKEELDIWAYPAVLVVYGVAAALF 347 >gi|77165379|ref|YP_343904.1| permease YjgP/YjgQ [Nitrosococcus oceani ATCC 19707] gi|254433097|ref|ZP_05046605.1| putative permease, YjgP/YjgQ family [Nitrosococcus oceani AFC27] gi|76883693|gb|ABA58374.1| permease YjgP/YjgQ [Nitrosococcus oceani ATCC 19707] gi|207089430|gb|EDZ66701.1| putative permease, YjgP/YjgQ family [Nitrosococcus oceani AFC27] Length = 381 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 50/320 (15%), Positives = 111/320 (34%), Gaps = 19/320 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + YIL+ + + L ++ I I+ ++ ++ + +L +SGY L Sbjct: 6 IVDRYILKELSLNATAITLVLLLIFGGIRFIRFLSQATEGKVPGEAILALSGYEAIGALV 65 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L M + E++ + G SR L++ VL + L+I + + Sbjct: 66 LLLPLASFLAVLLALGRMGADNEVIALFACGVSRGHLLRVVLTFGLALAIGVGGISLYLG 125 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNT-LQGIFIVDSRD 180 P + +L +A LA S L F + ++ +FI + Sbjct: 126 PAASAEGYRLKQQALLAAETSGLVAGNFKEAQHGQRVFYAESLTEDGLGMKNVFIQVW-E 184 Query: 181 TQTHKIYYAQSGSIDLD----RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + A G + D + +IL DG + + I F+ + + + + Sbjct: 185 PTQKTLLRAARGHLQTDEATGDKYLILEDGYRYELMGEEVGVRIFSFERHGILVKKGGAQ 244 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 ++ L +E R++ + ++ ++++ A R Sbjct: 245 EFRIRHQTLPTLTLWEMGAP----------KDIAEVQWRISMPIITLLLVMLAVPLA--R 292 Query: 297 ALVRQRKKIHPIFISLSISF 316 + RQ + + L Sbjct: 293 SGPRQGRYAGLVPAVLVYVI 312 >gi|260221417|emb|CBA29959.1| hypothetical protein Csp_A14760 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 367 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 64/360 (17%), Positives = 145/360 (40%), Gaps = 16/360 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F I + +GRSF + + +V + + +L+ + S T + +L I GY + + +P Sbjct: 2 LFHSSIRKELGRSFGATLVVLVTVVMTMTLLRTLGEASRGTFNPADVLIIMGYTVLSDMP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + + +V+T M R++E++I +G + L++P++ A + + + +I Sbjct: 62 TILSMSLFISVLSVVTRMYRDSEMVIWFGSGRGLLGLVRPLMRFAWPVLVVILALAFLIL 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPN-NTLQGIFIVDSRD 180 P S I+ L K + +E F + I K + T + +FI + + Sbjct: 122 PWSFSKIEDLRDKYDKRGDIARIEPGQFQESGNGDRVFFIEKDSKGQQTGKNVFIA-THE 180 Query: 181 TQTHKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 I A+SG+++ + ++L +G+ +S D+++ F+ Y + + ++S Sbjct: 181 GNKETITSARSGTVEVMNGDKFLVLQNGQRLERSSGKNDMTLSTFERYGARVGADDNSAR 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 ++ + L P+ + E R L I + AA Sbjct: 241 DYAPSNAKTTLELVQTPSALHM---------GELSWRAGLALAAFNLIWIGLAAAGANPR 291 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + + F++ + F + + + IP+L + + +L + K++ Sbjct: 292 AGRSTNLIFAFLAFVVYFNLLVLGKNWVENGK--AELIPMLLQLHGGVFLLSMLWLAKRH 349 >gi|293610039|ref|ZP_06692340.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292827271|gb|EFF85635.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 366 Score = 140 bits (352), Expect = 5e-31, Method: Composition-based stats. Identities = 54/355 (15%), Positives = 129/355 (36%), Gaps = 16/355 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + + L+ + I ++++ + + +IL I GY +P L Sbjct: 2 IIRRYLVKQVVSTSLVVISLLTLIMMGGRLIKYFGVAAQGRLDASILFSIIGYRLPEFLT 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + V + + E+ +++ +G SR L + ++ + ++ +F + + Sbjct: 62 LILPLGFFIGLMLVFGRLYVDHEMAVLNGSGVSRHQLARLLIPMTLVYMVFQSVLMLWMT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDS--R 179 P ++L+ + F + F I + + L+ IF + Sbjct: 122 PWGLREFEKLTTTQAVRTGFDLVRPREFISSGP-YTIYAGSLSEDRKNLKDIFFYQRAAK 180 Query: 180 DTQTHKIYYAQSGS----IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + + + A+ + + + L G + P + +F+SY L+ E+ Sbjct: 181 EDKPDVMILAKEATRVEVANDTANVVDLVQGRRYEIFPGQPKYTQAEFQSYRLRLENDKD 240 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + + L N+P RSE RL VI ++S+ ++ Sbjct: 241 VKFESGDVEALSTTKLFSKTNDP--------VIRSELGWRLFGPFTIVIALMLSVALSEV 292 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 + ++ P S + I K E + + P + + +++F Sbjct: 293 SPRQGRYYRLIPAIFIFSSLIVLMIAIKTRISKEELDIWAYPAVLVVYGVAAALF 347 >gi|257468008|ref|ZP_05632104.1| hypothetical protein FulcA4_01652 [Fusobacterium ulcerans ATCC 49185] gi|317062294|ref|ZP_07926779.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185] gi|313687970|gb|EFS24805.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185] Length = 362 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 60/366 (16%), Positives = 135/366 (36%), Gaps = 14/366 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K + YI + +SF +S + V I V Q+ + I VS S N + +IP + Sbjct: 3 IKIIDKYISKNFIKSFFLSLIAFVGIFLVSQLFKVIRYVSDGRFSANESITYILTMIPKI 62 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V P + + ++SM N E++ + G S ++ + ++ ++++ +F + Sbjct: 63 LIDVAPLAVLLGSLMTVSSMASNLEIISLKTAGISFKRIVLFPICISAVIAVMVFYINDS 122 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIK-ISKYNPNNTL-QGIFIVDS 178 + P +++ + ++N F R ++ Y+ + K N + I IVD Sbjct: 123 LYPYSVRKNREIKDGERAKREMPVEKKNAFLRGENSNYVYLMGKINRETGFGENIEIVDL 182 Query: 179 RD--TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + +I A+ G + ++ +L D ++ + K + F E Sbjct: 183 NEEFNKVERIITAKEGRYNFSKKVWVLKDANIYDGEKLEKPKEVKIFTENKYDDEPEKFI 242 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 T ++ + L + E R + I + + Sbjct: 243 TKSVEPKTLTIKEL-KKSVREIKSIGGDTRELLVEIGNRYSFPFSSFIISFLGLSLG--- 298 Query: 297 ALVRQRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLF---LFCISSIFLL 352 R + I ++LS++ G ++ + N + P + + + + Sbjct: 299 --SRYVRGASAISMALSVALGYGYYIVQASFEALSINGFLNPFISGWIPNIIFLGIGIYF 356 Query: 353 MIKKKY 358 M + +Y Sbjct: 357 MYRAEY 362 >gi|262382624|ref|ZP_06075761.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262295502|gb|EEY83433.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 658 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 86/205 (41%), Gaps = 2/205 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K ++L+ FLM+ +FI + + + I+ + + +L ++ Y + Sbjct: 4 IKRLYTFMLQTFLPLFLMTFGICLFIVLMQFLWRYIDDMVGKGLGIPVLAEMFMYAALFL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +PM P + + ++ ELL + + G S I +++P++ + +S+ F +N Sbjct: 64 VPMALPLAILLASLMTFGNLGERLELLAMKSAGVSLIHIMRPLIVTLLFVSVGAFFFQNN 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSR 179 + P + + L + + E F++ + + K +P + L+ + I D Sbjct: 124 VMPVVQVKLYTLLYSMRQKSPELDIPEGSFYKDIPGFNVYVKKKDPKDGLLKDVMIYDYS 183 Query: 180 DT-QTHKIYYAQSGSIDLDRQAIIL 203 + ++ A SG + + L Sbjct: 184 EGFNNARVIVADSGRLKTSADKLFL 208 Score = 37.2 bits (85), Expect = 3.5, Method: Composition-based stats. Identities = 15/101 (14%), Positives = 40/101 (39%), Gaps = 7/101 (6%) Query: 257 NPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISF 316 + Y+ + + +E+HK+ T ++F I A A++R+ P+ IS+ + Sbjct: 378 DEAYK---VRRHLTEWHKKFTVSFACIMFFFIG---APLGAIIRKGGLGVPVVISVILFI 431 Query: 317 GVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIKK 356 + + + ++L ++ + + + K Sbjct: 432 FYYIIDNMGFKMARDGVWDAWEGMWLSSVVLTPMGIFLTYK 472 >gi|269797613|ref|YP_003311513.1| permease YjgP/YjgQ family protein [Veillonella parvula DSM 2008] gi|269094242|gb|ACZ24233.1| permease YjgP/YjgQ family protein [Veillonella parvula DSM 2008] Length = 363 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 51/370 (13%), Positives = 129/370 (34%), Gaps = 17/370 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPT 59 M+ + YIL+ FL I + + ++ L ++++ +P+ Sbjct: 1 MRLLDKYILKAFVGPFLFGVFAFTSIFIGTGTLFRIAQYITEYGAPLLLVMQAFVLALPS 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ + P + + + ++ +E++++ G S + L PV +A+++SI Sbjct: 61 IVILTFPMSVLLASLMTFSRLSSTSEIVVMRAGGLSFLRLAMPVYIIALIISIGAVAFNE 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD----DLYIKISKYNPN-NTLQGIF 174 + P+ + + + + + ++ + + + Y+ L I Sbjct: 121 FVVPRTNHMYQTIVREQIMKNASPQTQNHIVLKTMNGDELGTLMYAKSYDAETKQLSMIT 180 Query: 175 IVDSRDTQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 + + ++ A + + Q ++ +G ++ S + MKFK +L +SA Sbjct: 181 VQQFGEGGKLQQVENADTA--IWNGQYWVMQNGIIYDLSAGNGVERTMKFKEQSLPIKSA 238 Query: 234 NS--STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 K + + L + E ++R T L +F L+ Sbjct: 239 PKDIQQDQRKPEELTIKELRHQIRAYKAAYTN-ANKLEMEMYQRFTIPLASFVFALVGAP 297 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL-YLFLFCISSIF 350 + +QR F + +++G + + +L L + I Sbjct: 298 LGLQ----KQRSSSSIGFGISILIIFIYYGVMTFAGALGKGGALPTLLAALIPDTLGIIA 353 Query: 351 LLMIKKKYTK 360 L + + +K Sbjct: 354 GLYLNWRVSK 363 >gi|206890381|ref|YP_002249742.1| putative permease, YjgP/YjgQ family [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742319|gb|ACI21376.1| putative permease, YjgP/YjgQ family [Thermodesulfovibrio yellowstonii DSM 11347] Length = 351 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 57/357 (15%), Positives = 128/357 (35%), Gaps = 6/357 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + R + ++ +S F+ + + ++ + + +S L L+ + L P + Sbjct: 1 MKVIYKALTRELLQNIGLSIAFLNAVLIIEKLFKLSKIFASVGIDLPNLVLLILLLQPQL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + + E+ I +G KP +++ ++ F + Sbjct: 61 LIFTIPMALLLSILLTYGRTQADNEMTIFMVSGMPYKKTFKPAIYIGLIAFFFTVLMSFY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P S +++ LEE +F + D+ I + + + L+ + I D R Sbjct: 121 LAPTGVSLVREKILTILAERAPLGLEEGVFNQGFKDVTIFVKEKPDSLHLKEVVIFDERK 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 T KI A+ G I +R I L+ ++ + FK Y + S N I Sbjct: 181 NDT-KIVIAKGGLIKKERDNINLSLLNGKAYFNKGLTLNEVSFKEYIFRL-SPNIDPIAK 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K ++ +L L++ + Y+ E +KR L ++ ++ Sbjct: 239 KVSELSLFELVSKIQTEEVKAID----YKLELYKRFALPLLCIVSVFLAPSLCLIVGKTG 294 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + I + + + + + + + +L + + I + + +K Sbjct: 295 RIGGITVGLAIFAFYYILMIYGANLAKAGKVSAEIGSLLPVIVMAILAFTMYTRIRK 351 >gi|89900899|ref|YP_523370.1| permease YjgP/YjgQ [Rhodoferax ferrireducens T118] gi|89345636|gb|ABD69839.1| permease YjgP/YjgQ [Rhodoferax ferrireducens T118] Length = 373 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 53/361 (14%), Positives = 134/361 (37%), Gaps = 15/361 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F I + + RSF + + + + + +++ + S + + + ++ + GY + +P Sbjct: 2 LFHSSIRKELARSFGATLIVLATVVMTMTLIRTLGQASRGSFNPSDVMLVMGYTVLAYMP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + + L+ M R++E++I ++G L+ P+ A + + + ++ Sbjct: 62 TILTMSLFIAIIATLSRMYRDSEMVIWFSSGKGLAALLGPLFRFAWPVLLVVAALALLVL 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTL--QGIFIVDSRD 180 P I+ L + + +E F + + + +FI + D Sbjct: 122 PWSNQRIETLKDQYEKRGDIERIEPGQFQESAGGKRVFFVEKDATGKQAGNNVFIATNED 181 Query: 181 TQTHKIYYAQSGSIDLDRQ--AIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + A+ G I+ Q ++L++G+ + D+ I +F+ Y ++ S Sbjct: 182 GKETIT-SARRGRIETIGQDRFLMLSNGQRLESVLGTSDLKISEFEEYGIKVGKDVLSGS 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD-KRA 297 + + L N PN +E R+ L + F +I I + Sbjct: 241 NYVPINTQPTLALFKNQTLPN---------LAELSWRIGLILAAINFVIIGIAVSGVNPR 291 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + R + +F + + G S+I +++ +++ + ++L Sbjct: 292 VGRSANLVFSLFAFVLYYNLLSLGQSWIASGKFTFGWFLAVVHGGALVLGILWLAKGHNN 351 Query: 358 Y 358 + Sbjct: 352 W 352 >gi|294793349|ref|ZP_06758494.1| membrane protein, YjgP/YjgQ family [Veillonella sp. 6_1_27] gi|294455780|gb|EFG24145.1| membrane protein, YjgP/YjgQ family [Veillonella sp. 6_1_27] Length = 363 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 51/370 (13%), Positives = 129/370 (34%), Gaps = 17/370 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPT 59 M+ + YIL+ FL I + + ++ L ++++ +P+ Sbjct: 1 MRLLDKYILKAFVGPFLFGVFAFTSIFIGTGTLFRIAQYITEYGAPLLLVMQAFVLALPS 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ + P + + + ++ +E++++ G S + L PV +A+++SI Sbjct: 61 IVILTFPMSVLLASLMTFSRLSSTSEIVVMRAGGLSFLRLAMPVYIIALIISIGAVAFNE 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD----DLYIKISKYNPN-NTLQGIF 174 + P+ + + + + + ++ + + + Y+ L I Sbjct: 121 FVVPRTNHMYQTIVREQIMKNASPQTQNHIVLKTMNGDELGTLLYAKSYDAETKQLSMIT 180 Query: 175 IVDSRDTQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 + + ++ A + + Q ++ +G ++ S + MKFK +L +SA Sbjct: 181 VQQFGEGGKLQQVENADTA--IWNGQYWVMQNGIIYDLSAGNGVERTMKFKEQSLPIKSA 238 Query: 234 NS--STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 K + + L + E ++R T L +F L+ Sbjct: 239 PKDIQQDQRKPEELTIKELRHQIRAYKAAYTN-ANKLEMEMYQRFTIPLASFVFALVGAP 297 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL-YLFLFCISSIF 350 + +QR F + +++G + + +L L + I Sbjct: 298 LGLQ----KQRSSSSIGFGISILIIFIYYGVMTFAGALGKGGALPTVLAALIPDTLGIIA 353 Query: 351 LLMIKKKYTK 360 L + + +K Sbjct: 354 GLYLNWRVSK 363 >gi|21673570|ref|NP_661635.1| hypothetical protein CT0740 [Chlorobium tepidum TLS] gi|21646682|gb|AAM71977.1| membrane protein, putative [Chlorobium tepidum TLS] Length = 452 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 51/265 (19%), Positives = 101/265 (38%), Gaps = 13/265 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK F+ YIL+ +F + + I+F+ + + Q + + I+L++ + Sbjct: 11 MKIFDRYILKEHLGTFFFAFVTIMFVFILTFLTQFLERLIGKGLDFRIILEVVALQSAWM 70 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + T +S+ ++EL ++ G S L+ PVL A+ LS+ + N+ Sbjct: 71 VGLAVPMAVLVSTVMAFSSLTNSSELTVMRAGGISIYRLVAPVLLAALALSLMMERFNNV 130 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 + P+ L A +++N F + I + + L+ I + D Sbjct: 131 LMPEANYKANALFADITRMKPGLGIDKNAFSDVIQGYSIMVRDIDNETGELRDIVLYDRG 190 Query: 180 DTQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKS-PISKDISIMKF--KSYTLQT-- 230 + A G I + + L DG++H S P M F Y Sbjct: 191 RPDVRTVIMAARGRIQFSQDYSHLVLTLEDGQIHELSLPAMDRYRKMVFARNRYVFDATG 250 Query: 231 ---ESANSSTIVLKANDQNLSFLLN 252 E + + + + + LL+ Sbjct: 251 YGFERTDDGKRRRGSKELSAAELLS 275 Score = 42.6 bits (99), Expect = 0.084, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 37/97 (38%), Gaps = 6/97 (6%) Query: 262 PELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWG 321 E Y E+HK+ + V+F +I A + R +SL F ++W Sbjct: 350 RESFYNYMIEYHKKYSLAFACVVFAMIG---APLGVMARHGGFGAGAALSL-FFFVLYWV 405 Query: 322 FSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMIKK 356 KI + +P + +L ++ L MI + Sbjct: 406 LLIGGEKIAERGLLLPAISVWLPNVVLAVTGLFMIYR 442 >gi|156935580|ref|YP_001439496.1| hypothetical protein ESA_03444 [Cronobacter sakazakii ATCC BAA-894] gi|156935598|ref|YP_001439514.1| hypothetical protein ESA_03463 [Cronobacter sakazakii ATCC BAA-894] gi|156533834|gb|ABU78660.1| hypothetical protein ESA_03444 [Cronobacter sakazakii ATCC BAA-894] gi|156533852|gb|ABU78678.1| hypothetical protein ESA_03463 [Cronobacter sakazakii ATCC BAA-894] Length = 370 Score = 139 bits (351), Expect = 6e-31, Method: Composition-based stats. Identities = 57/348 (16%), Positives = 127/348 (36%), Gaps = 25/348 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPTNLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+L I ++ Sbjct: 62 LILPLSLFLALLMTLGRLYTESEITVMHACGLSKAVLVKAAMVLALLTGIVAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + D + + + +F+ R Sbjct: 122 PWSSRHQDEVLAEAKANPGMAALAQGQFQQATDGNAVLFIESVNGSKFNDVFLAQLRPKG 181 Query: 183 T--HKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I FK Y + Sbjct: 182 NARPSVVVADSGELSQRKDGSQVVTLNQGTRFEGTAMLRDFRITDFKDYKAIIGHQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 A ++ L N + R+EFH RLT ++ L+ + Sbjct: 242 DPDDAEQMDMKTLWQANSKSA----------RAEFHWRLTLVFAVIVMALMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLF 342 RQ + +S+ + ++ F + + N P+++++ Sbjct: 290 NPRQGR-----VLSMLPAMLLYLIFFLLQTSLRSNGAKGKLDPLIWMW 332 >gi|261867783|ref|YP_003255705.1| 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413115|gb|ACX82486.1| 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase [Aggregatibacter actinomycetemcomitans D11S-1] Length = 372 Score = 139 bits (351), Expect = 6e-31, Method: Composition-based stats. Identities = 59/357 (16%), Positives = 124/357 (34%), Gaps = 19/357 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + I +S + ++ I + Q+++ + ++ +++ + G +PT+ Sbjct: 6 ILTRYLTKEIFKSQIAILFILLLIFFCQQLVRVLGSAANGKVPADLVFSLLGLGMPTMAQ 65 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P C + L + +E+ ++ G + L+K VL L++L S + + Sbjct: 66 LMLPLCLFIAILLTLGRLYAESEITVMRACGVGQPILVKVVLLLSLLTSGVAAYNALWLT 125 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIKISKYNPNNTLQGIFIVDS--R 179 P ++ A+ L F ++ D + I NN + +++ + R Sbjct: 126 PWAIHKQTEIVEDAKANPNVGALSAGQFVSANNSDFVLFIDDI-QNNQINNVYVFQTQPR 184 Query: 180 DTQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + A+ G + Q + L + E + D I F Y + Sbjct: 185 GQSKPSVIVAEKGELKALPNGDQVLNLQNSERFEGTAALPDFRITHFDEYQAYLGHKAVN 244 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + +LS LLN ++EFH RLT L I L+++ R Sbjct: 245 DDSAETEELSLSQLLN----------TKTPAAKTEFHWRLTLILAVPIMALLAVP--LSR 292 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 RQ + + L S + L + +L+ Sbjct: 293 VNPRQGRFAKVLPALLLYLIYFLLQSSLKSAGGAGKLDAGLFMPLVNIVFFLLAILL 349 >gi|71738034|ref|YP_273425.1| hypothetical protein PSPPH_1158 [Pseudomonas syringae pv. phaseolicola 1448A] gi|257487386|ref|ZP_05641427.1| hypothetical protein PsyrptA_29203 [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289623815|ref|ZP_06456769.1| hypothetical protein PsyrpaN_01510 [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289649166|ref|ZP_06480509.1| hypothetical protein Psyrpa2_15674 [Pseudomonas syringae pv. aesculi str. 2250] gi|298485819|ref|ZP_07003897.1| Putative membrane protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71558587|gb|AAZ37798.1| membrane protein, putative [Pseudomonas syringae pv. phaseolicola 1448A] gi|298159643|gb|EFI00686.1| Putative membrane protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320322888|gb|EFW78979.1| hypothetical protein PsgB076_20537 [Pseudomonas syringae pv. glycinea str. B076] gi|320329803|gb|EFW85791.1| hypothetical protein PsgRace4_11121 [Pseudomonas syringae pv. glycinea str. race 4] gi|330867846|gb|EGH02555.1| hypothetical protein PSYAE_11461 [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330989713|gb|EGH87816.1| hypothetical protein PLA107_32136 [Pseudomonas syringae pv. lachrymans str. M301315] gi|331009018|gb|EGH89074.1| hypothetical protein PSYTB_04815 [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 375 Score = 139 bits (351), Expect = 6e-31, Method: Composition-based stats. Identities = 60/359 (16%), Positives = 130/359 (36%), Gaps = 31/359 (8%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ R + + ++ + ++ + +S +L I G+ +P L ++ Sbjct: 5 RYLSREVLLTLSAVSAVLLVFIMSGRFIKYLAQAASGALDPGVLFLIMGFRLPGFLQVIL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + + +E+ ++ TG S+ L+ + A L+ + + + P+ Sbjct: 65 PLGLFLGILMAYGRLYLESEMTVLAATGMSQQRLLAITMGPATLVGLLVAWLSFSLAPQG 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYNPNNT-LQGIFIV------D 177 + L K F L F L D I + + + + L G+FI D Sbjct: 125 ATQFSLLINKQDAMTEFDTLVPGRFQALRDGTRITYTKELSEDRSQLAGVFISEKRMSGD 184 Query: 178 SRDTQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + A+ G ++ +IL +G + +P + D ++K+ +Y Sbjct: 185 KSKDNGITVLVAEKGHQEVRPNGSRFLILENGYRYDGNPGAADYRVIKYDTYGAMLPKPE 244 Query: 235 SSTIVLKANDQNLSFLL-NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 S + S L+ NP P + +E R++ L I L++I Sbjct: 245 ISEEITDREAIPTSELIGNPAPRS-----------VAELQWRISLPLSVFIVTLMAIP-- 291 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFL 351 R RQ + + L + ++ + I+ + + + L L ++ + I+L Sbjct: 292 LSRVNPRQGRYLK-----LLPAILLYMSYLAILISVRSSLEKGKLPLSLGMWWVHGIYL 345 >gi|325267813|ref|ZP_08134463.1| YjgP/YjgQ family permease [Kingella denitrificans ATCC 33394] gi|324980694|gb|EGC16356.1| YjgP/YjgQ family permease [Kingella denitrificans ATCC 33394] Length = 374 Score = 139 bits (351), Expect = 6e-31, Method: Composition-based stats. Identities = 52/368 (14%), Positives = 143/368 (38%), Gaps = 25/368 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ L+ + + + I+ I Q + + + +++ + + G+ + + P Sbjct: 2 IYQRQFLKETTITAIAVFVVILAILVFTQGITLLGRAAGGNVAIDAVGTLIGFWVLNLAP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ I ++G +KPV+ A+ L + + + + + Sbjct: 62 LLLVLTAYISTLTVLTRYWRDSEMAIWLSSGLGLRQWVKPVMTFALPLMLLIAVLQIFVL 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLD--DDLYIKISKYNP-NNTLQGIFIVDSR 179 P ++ + + S +E+ F L + + +++ L +F+ + Sbjct: 122 PWAELRSREYAELLKQKQNLSLVEQGKFTELGKKNGRIYFVEQFDAHAGQLNHLFLREIG 181 Query: 180 DTQTHKIYYAQSGSIDLDRQ----AIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN- 234 D +++ +A+SG L+ ++L++G + + D + FK L T + Sbjct: 182 DDGKNQVIFAESGQFTLEGSDQHRTLVLHNGYRYLGNAGQGDFEQIAFKELRLATNTTPK 241 Query: 235 -SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 ++ I + + L + +P +++E R++ P+ ++ +A Sbjct: 242 LANPIDHRNTIPTIQLLRSKDP-----------VHQAELMWRIS---LPITVVVLCWLAI 287 Query: 294 DKRALVRQRKKIHPIFISLSISFGVF--WGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + + + +++ + Y K + ++ +L + I +L Sbjct: 288 PISYFNPRSGNSYHVLVAVGFFLVYQNSLTWVYGAMKSGKISFWPALLSVHGLTILCAWL 347 Query: 352 LMIKKKYT 359 LM + Sbjct: 348 LMRVRSLP 355 >gi|260886292|ref|ZP_05897555.1| membrane protein, YjgP/YjgQ family [Selenomonas sputigena ATCC 35185] gi|330839725|ref|YP_004414305.1| permease YjgP/YjgQ family protein [Selenomonas sputigena ATCC 35185] gi|260864011|gb|EEX78511.1| membrane protein, YjgP/YjgQ family [Selenomonas sputigena ATCC 35185] gi|329747489|gb|AEC00846.1| permease YjgP/YjgQ family protein [Selenomonas sputigena ATCC 35185] Length = 363 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 48/369 (13%), Positives = 131/369 (35%), Gaps = 19/369 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPT 59 ++ + YI R + +F + + + ++ S ++K+ + +P Sbjct: 3 IRLLDKYIFREVCLAFFFGICGTSAVFVGSGTLFRIAQYITEYGASFGSVVKMFIFSLPA 62 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + P + ++ ++E+ + + G S + PV+ L +++SIF + Sbjct: 63 IAIYTFPMSMLLAALLTFGRLSSSSEITAMKSCGVSFYRIAAPVIVLGVVVSIFSILFTE 122 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD----LYIKISKYN-PNNTLQGIF 174 I P+ + + + A ++++ + D + +Y+ TL+G+ Sbjct: 123 HIVPRANNAYENVIAYEIQGNAAPKSQDHIVIKEIKDGEMQRLMYARRYDAATETLEGVT 182 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + Q Y + + + G ++ S + ++ +F L + Sbjct: 183 LQSF--EQGETKYVQDAAYAKWEGTQWTMYRGAIYEVSGGKSEHTM-RFDKQVLPINAGP 239 Query: 235 SSTIV--LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + K + + L + + +E ++R+T + ++F +I + Sbjct: 240 GRIVREQKKPEELTMKEL-RQQIELMRTQFVDTKKLETELYQRITIPMASLVFAIIGVPL 298 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI--- 349 + + I +SL I F + + + Q+ P ++L ++ + Sbjct: 299 GIQPT---RSSSSRGIGLSLLIFFCYYV-LMTLAGALGQSGALNPAYAVWLPNVAGLLIG 354 Query: 350 FLLMIKKKY 358 LM + + Sbjct: 355 AYLMREAAH 363 >gi|66044343|ref|YP_234184.1| permease YjgP/YjgQ [Pseudomonas syringae pv. syringae B728a] gi|302188386|ref|ZP_07265059.1| permease YjgP/YjgQ [Pseudomonas syringae pv. syringae 642] gi|63255050|gb|AAY36146.1| permease YjgP/YjgQ [Pseudomonas syringae pv. syringae B728a] gi|330899517|gb|EGH30936.1| permease YjgP/YjgQ [Pseudomonas syringae pv. japonica str. M301072PT] gi|330950946|gb|EGH51206.1| permease YjgP/YjgQ [Pseudomonas syringae Cit 7] gi|330969234|gb|EGH69300.1| permease YjgP/YjgQ [Pseudomonas syringae pv. aceris str. M302273PT] Length = 375 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 59/359 (16%), Positives = 131/359 (36%), Gaps = 31/359 (8%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ R + + ++ + ++ + +S +L I G+ +P L ++ Sbjct: 5 RYLSREVLLTLSAVSAVLLVFIMSGRFIKYLAQAASGALDPGVLFLIMGFRLPGFLQVIL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + + +E+ ++ TG S+ L+ + A L+ + + + P+ Sbjct: 65 PLGLFLGILMAYGRLYLESEMTVLAATGMSQQRLLAITMGPATLVGLLVAWLSFSLAPQG 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYNPNNT-LQGIFI------VD 177 + L + F L F L D I + + + + L G+FI D Sbjct: 125 ATQFSLLINQQDAMTEFDTLVPGRFQALRDGTRITYTKELSEDRSQLAGVFISEKRMSSD 184 Query: 178 SRDTQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + A+ G ++ +IL +G + +P + D ++K+ +Y Sbjct: 185 KSKDNGITVLVAEKGHQEVRPNGSRFLILENGYRYDGNPGAADYRVIKYDTYGAMLPKPE 244 Query: 235 SSTIVLKANDQNLSFLL-NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 S + S L+ NP P + +E R++ L I L++I Sbjct: 245 ISEEITDREAIPTSELIGNPAPRSV-----------AELQWRISLPLSVFIVTLMAIP-- 291 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFL 351 R RQ + + L + ++ + I+ + + + L L ++ + +I+L Sbjct: 292 LSRVNPRQGRYLK-----LLPAILLYMSYLAILISVRSSLEKGKLPLSLGMWWVHAIYL 345 >gi|301308106|ref|ZP_07214060.1| putative permease [Bacteroides sp. 20_3] gi|300833576|gb|EFK64192.1| putative permease [Bacteroides sp. 20_3] Length = 651 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 86/205 (41%), Gaps = 2/205 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K ++L+ FLM+ +FI + + + I+ + + +L ++ Y + Sbjct: 4 IKRLYTFMLQTFLPLFLMTFGICLFIVLMQFLWRYIDDMVGKGLGIPVLAEMFMYAALFL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +PM P + + ++ ELL + + G S I +++P++ + +S+ F +N Sbjct: 64 VPMALPLAILLASLMTFGNLGERLELLAMKSAGVSLIHIMRPLIVTLLFVSVGAFFFQNN 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSR 179 + P + + L + + E F++ + + K +P + L+ + I D Sbjct: 124 VMPVVQVKLYTLLYSMRQKSPELDIPEGSFYKDIPGFNVYVKKKDPKDGLLKDVMIYDYS 183 Query: 180 DT-QTHKIYYAQSGSIDLDRQAIIL 203 + ++ A SG + + L Sbjct: 184 EGFNNARVIVADSGRLKTSADKLFL 208 Score = 37.2 bits (85), Expect = 3.7, Method: Composition-based stats. Identities = 15/101 (14%), Positives = 40/101 (39%), Gaps = 7/101 (6%) Query: 257 NPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISF 316 + Y+ + + +E+HK+ T ++F I A A++R+ P+ IS+ + Sbjct: 378 DEAYK---VRRHLTEWHKKFTVSFACIMFFFIG---APLGAIIRKGGLGVPVVISVILFI 431 Query: 317 GVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIKK 356 + + + ++L ++ + + + K Sbjct: 432 FYYIIDNMGFKMARDGVWDAWEGMWLSSVVLTPMGIFLTYK 472 >gi|298374434|ref|ZP_06984392.1| permease [Bacteroides sp. 3_1_19] gi|298268802|gb|EFI10457.1| permease [Bacteroides sp. 3_1_19] Length = 651 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 86/205 (41%), Gaps = 2/205 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K ++L+ FLM+ +FI + + + I+ + + +L ++ Y + Sbjct: 4 IKRLYTFMLQTFLPLFLMTFGICLFIVLMQFLWRYIDDMVGKGLGIPVLAEMFMYAALFL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +PM P + + ++ ELL + + G S I +++P++ + +S+ F +N Sbjct: 64 VPMALPLAILLASLMTFGNLGERLELLAMKSAGVSLIHIMRPLIVTLLFVSVGAFFFQNN 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSR 179 + P + + L + + E F++ + + K +P + L+ + I D Sbjct: 124 VMPVVQVKLYTLLYSMRQKSPELDIPEGSFYKDIPGFNVYVKKKDPKDGLLKDVMIYDYS 183 Query: 180 DT-QTHKIYYAQSGSIDLDRQAIIL 203 + ++ A SG + + L Sbjct: 184 EGFNNARVIVADSGRLKTSADKLFL 208 Score = 37.2 bits (85), Expect = 3.8, Method: Composition-based stats. Identities = 15/101 (14%), Positives = 40/101 (39%), Gaps = 7/101 (6%) Query: 257 NPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISF 316 + Y+ + + +E+HK+ T ++F I A A++R+ P+ IS+ + Sbjct: 378 DEAYK---VRRHLTEWHKKFTVSFACIMFFFIG---APLGAIIRKGGLGVPVVISVILFI 431 Query: 317 GVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIKK 356 + + + ++L ++ + + + K Sbjct: 432 FYYIIDNMGFKMARDGVWDAWEGMWLSSVVLTPMGIFLTYK 472 >gi|291287413|ref|YP_003504229.1| permease YjgP/YjgQ family protein [Denitrovibrio acetiphilus DSM 12809] gi|290884573|gb|ADD68273.1| permease YjgP/YjgQ family protein [Denitrovibrio acetiphilus DSM 12809] Length = 349 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 51/363 (14%), Positives = 128/363 (35%), Gaps = 20/363 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YIL+ I F + +F V + + +++ +L + ++++ Y +P+ Sbjct: 1 MKLLHKYILKEIYPIFFLGNVFFVLLLLLDKLIDLADLFFTKNVPAFLIIQTIVYYLPSF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + ++ ++E+ + G + P + + + + Sbjct: 61 LVITIPTSAMLAVMIGFGRLSSDSEVTAMRAAGAGKKFFTTPTIIFGLTAFLLGIMMSLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +K ++ + ++E + + K + N + + I+D Sbjct: 121 LMPAGSRNAIGNLSKIAKLVSINDMKEKELYDELPGIVFYAVKKDSNAKYRKMVIID--- 177 Query: 181 TQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 H + A I A + L +G + + S + F ++TL + ++ Sbjct: 178 KAQHSVITANEAEILPSGNAGLLMNLKNGRIVTLN-EDGKHSKINFDTFTLNSPLIDAKD 236 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 I + +++ + + + Y+ EF KR++ +I + + Sbjct: 237 ISVN-SERIMQT------KDLIENFQEAPLYKFEFSKRISMPFAAIIMSIFGMS---LGI 286 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ---NPYYIPILYLFLFCISSIFLLMI 354 + + I I++++ F + E P+ L LF + ++F Sbjct: 287 FFHRSGRSLAIPITIAVVAVYNILFFAAENFAESGRIEPFLAAWLPNILFALIAVFFYRR 346 Query: 355 KKK 357 K Sbjct: 347 AMK 349 >gi|86609823|ref|YP_478585.1| YjgP/YjgQ family protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558365|gb|ABD03322.1| putative membrane protein, YjgP/YjgQ family [Synechococcus sp. JA-2-3B'a(2-13)] Length = 400 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 60/378 (15%), Positives = 130/378 (34%), Gaps = 29/378 (7%) Query: 2 KSFELYILRCIGRSFLMSCLFIV-FIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + Y+L + FL + V + + + LV + SL+ L++ P + Sbjct: 26 GLMDRYVLSEMLLPFLFGVGAFTTLVMAVGSLFELVRLVVEAGLSLSAALQVFVLRAPGI 85 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + T ++ + E+ + G S L+ P L L++L++ F+ + Sbjct: 86 IVLTFPMSMLLATLLAYGRLSADNEITALRGCGVSLYRLMVPALVLSLLVTTLTFLFNEL 145 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLE---------------ENLFFRLDDDLY--IKISK 163 + P +A E + F R L Sbjct: 146 VVPVSNRQAATTLNRALNRDPDFRRENILYQEFGEILMPEPDGTFSR-RQGLTRQFYARS 204 Query: 164 YNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKF 223 ++ ++GI ++D + ++I AQ G D + DG + SP +I F Sbjct: 205 FD-GKQMRGIIVLDFSNEALNQILLAQRGRWDPQENLWVFEDGTNYIVSPDGTYSNIATF 263 Query: 224 KSYTLQTESANSS--TIVLKANDQNLSFLLNPNPNNPNY-RPELLETYRSEFHKRLTQWL 280 L+ A + + N+ L + + + + + +++ Sbjct: 264 SRQELRLPRAPLELAQEIRSPEEMNIRELKHYIEVIASSGDLQRVRRLQVSLNQKYAIPF 323 Query: 281 FPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP--I 338 + F LI + + ++ + IS+ I F F+ +I + Q P Sbjct: 324 ACLAFTLIGVPLGLRP---QRTGSSLGLGISVLIIFA-FYVLLFITQALGQIGTLGPATA 379 Query: 339 LYLFLFCISSIFLLMIKK 356 +L F + + L ++ + Sbjct: 380 AWLPNFICAVVGLGLLHR 397 >gi|282850060|ref|ZP_06259442.1| YjgP/YjgQ family [Veillonella parvula ATCC 17745] gi|282580249|gb|EFB85650.1| YjgP/YjgQ family [Veillonella parvula ATCC 17745] Length = 363 Score = 139 bits (350), Expect = 8e-31, Method: Composition-based stats. Identities = 52/370 (14%), Positives = 129/370 (34%), Gaps = 17/370 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPT 59 M+ + YIL+ FL I + + ++ L ++++ +P+ Sbjct: 1 MRLLDKYILKAFVGPFLFGVFAFTSIFIGTGTLFRIAQYITEYGAPLLLVMQAFVLALPS 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ + P + + + ++ +E++++ G S + L PV +A+++SI Sbjct: 61 IVILTFPMSVLLASLMTFSRLSSTSEIVVMRAGGLSFLRLAMPVYIIALIISIGAVAFNE 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD----DLYIKISKYNPN-NTLQGIF 174 + P+ + + + + + ++ + + + YN L I Sbjct: 121 FVVPRTNHMYQTIVREQIMKNASPQTQNHIVLKTMNGDELGTLMYAKSYNAETKQLSMIT 180 Query: 175 IVDSRDTQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 + + ++ A + + Q ++ +G ++ S + MKFK +L +SA Sbjct: 181 VQQFGEGGKLQQVENADTA--IWNGQYWVMQNGIIYDLSAGNGVERTMKFKEQSLPIKSA 238 Query: 234 NS--STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 K + + L + E ++R T L +F L+ Sbjct: 239 PKDIQQDQRKPEELTIKELRHQIRAYKAAYTN-ANKLEMEMYQRFTIPLASFVFALVGAP 297 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL-YLFLFCISSIF 350 + +QR F + +++G + + +L L + I Sbjct: 298 LGLQ----KQRSSSSIGFGISILIIFIYYGVMTFAGALGKGGALPTVLAALIPDTLGIIA 353 Query: 351 LLMIKKKYTK 360 L + + +K Sbjct: 354 GLYLNWRVSK 363 >gi|150010074|ref|YP_001304817.1| hypothetical protein BDI_3493 [Parabacteroides distasonis ATCC 8503] gi|256838884|ref|ZP_05544394.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|149938498|gb|ABR45195.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503] gi|256739803|gb|EEU53127.1| conserved hypothetical protein [Parabacteroides sp. D13] Length = 651 Score = 139 bits (350), Expect = 8e-31, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 86/205 (41%), Gaps = 2/205 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K ++L+ FLM+ +FI + + + I+ + + +L ++ Y + Sbjct: 4 IKRLYTFMLQTFLPLFLMTFGICLFIVLMQFLWRYIDDMVGKGLGIPVLAEMFMYAALFL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +PM P + + ++ ELL + + G S I +++P++ + +S+ F +N Sbjct: 64 VPMALPLAILLASLMTFGNLGERLELLAMKSAGVSLIHIMRPLIVTLLFVSVGAFFFQNN 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSR 179 + P + + L + + E F++ + + K +P + L+ + I D Sbjct: 124 VMPVVQVKLYTLLYSMRQKSPELDIPEGSFYKDIPGFNVYVKKKDPKDGLLKDVMIYDYS 183 Query: 180 DT-QTHKIYYAQSGSIDLDRQAIIL 203 + ++ A SG + + L Sbjct: 184 EGFNNARVIVADSGRLKTSADKLFL 208 Score = 37.2 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 15/101 (14%), Positives = 40/101 (39%), Gaps = 7/101 (6%) Query: 257 NPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISF 316 + Y+ + + +E+HK+ T ++F I A A++R+ P+ IS+ + Sbjct: 378 DEAYK---VRRHLTEWHKKFTVSFACIMFFFIG---APLGAIIRKGGLGVPVVISVILFI 431 Query: 317 GVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIKK 356 + + + ++L ++ + + + K Sbjct: 432 FYYIIDNMGFKMARDGVWDAWEGMWLSSVVLTPMGIFLTYK 472 >gi|254456522|ref|ZP_05069951.1| putative permease, YjgP/YjgQ family [Candidatus Pelagibacter sp. HTCC7211] gi|207083524|gb|EDZ60950.1| putative permease, YjgP/YjgQ family [Candidatus Pelagibacter sp. HTCC7211] Length = 362 Score = 139 bits (350), Expect = 8e-31, Method: Composition-based stats. Identities = 61/357 (17%), Positives = 139/357 (38%), Gaps = 20/357 (5%) Query: 13 GRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAME 72 FL++ + + WV Q + ++++ S ++ + S P ++ + PF Sbjct: 1 MSFFLIALISAGIVIWVFQAVNFLDIMIEDGRSYSVYISYSLLNFPKIINKLFPFILFFS 60 Query: 73 TTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQL 132 V N EL+I N G ++I LI + +++L + I II PK + + Sbjct: 61 LFYVTIKYENNNELIIFWNFGINKIQLINFIFKFSVILMLIQLIFSAIIVPKSQDLARSF 120 Query: 133 SAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSG 192 + + ++++ F ++ I + + + L +++ + +I YA+ G Sbjct: 121 LRSSTVNFYENFIKPKRFNDTIKNVTIFSERKDIDGNLYNLYLKKEINENNFQITYAKKG 180 Query: 193 SIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLS-- 248 + ++L +GE + + +I+ F + +++ V + Q LS Sbjct: 181 YFKEFNNLPVLVLFNGET--ITSKNNEITNFSFSKSDFPINNTETNSFVTQQKTQELSSY 238 Query: 249 -------FLL-----NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 FL+ +P N + E +KR ++ ++ LI ++ Sbjct: 239 NLLKCVKFLIPTKKNKLDPKIINCSERNKDNIFKELYKRFIIPIYILVLTLIPLLVTILS 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSY--IIHKIEQNPYYIPILYLFLFCISSIFL 351 + ++ I + + F +F + I I +N + ++F+ + IFL Sbjct: 299 KEDSKYSRLKFIAFLIGLFFIIFSETTIRLISDSIIKNISISLLPFIFIITLYLIFL 355 >gi|157368808|ref|YP_001476797.1| permease YjgP/YjgQ family protein [Serratia proteamaculans 568] gi|157320572|gb|ABV39669.1| permease YjgP/YjgQ family protein [Serratia proteamaculans 568] Length = 364 Score = 139 bits (350), Expect = 8e-31, Method: Composition-based stats. Identities = 56/356 (15%), Positives = 127/356 (35%), Gaps = 19/356 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + +++ + N++L + +P + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFCQNLVRVLGDAVDGDVPTNLVLSLLALGVPKMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + ++E+ ++ G + TLI + LA+ S+ + + Sbjct: 62 LILPLSLFLGLLMTLGRLYTDSEITVMHACGLGKRTLIIAAMVLALFTSVIAAANVFWVG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + ++A+ + + L E F D + +T +F+ R Sbjct: 122 PWASRYQDVVVSEAKANPSIAGLAEGQFKTSQDGNAVLFIGNVKGSTFNNVFLAQLRPNG 181 Query: 183 T--HKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G I+ Q + L+ G + + +D I F Y + Sbjct: 182 NQRPSVVVAEHGQINQMKDGSQVVTLDKGTRFEGTALLRDFRITDFNDYKAVVGHRAVTV 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +A ++ LL + + R+EFH RLT L VI L+ + Sbjct: 242 DGNQAEQMSMKTLLASDDPDA----------RAEFHWRLTLVLSVVIMALLVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 RQ + + + L S + + P+++L++ + + + Sbjct: 290 NPRQGRVLSMLPAILLYLIFFLLQTSLRSNGGKGKLD--PMVWLWVVNAAYFAIAL 343 >gi|114319720|ref|YP_741403.1| permease YjgP/YjgQ family protein [Alkalilimnicola ehrlichii MLHE-1] gi|114226114|gb|ABI55913.1| permease YjgP/YjgQ family protein [Alkalilimnicola ehrlichii MLHE-1] Length = 372 Score = 139 bits (350), Expect = 8e-31, Method: Composition-based stats. Identities = 55/364 (15%), Positives = 143/364 (39%), Gaps = 26/364 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y++R + ++L L + + +++ + + ++L + G L Sbjct: 8 VVDRYLVREVLFAWLAVLLVLFAVLATNRLIGYLGDAAGGELPGGVILTLLGLQTVRYLG 67 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M+ P F + + R++E+ ++ G + +L+LA+ L+ + + Sbjct: 68 MILPASFFLGIVLAFGRLYRDSEMAVMSACGIGPWRQFRALLWLALPLAGLVGLLSLYWG 127 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL--YIKISKYNPNN-TLQGIFIVDSR 179 P +Q+ A+A+ + F+ L+ F + + + + + + ++ +FI + Sbjct: 128 PAATQKAEQVQAEAEAQVEFAALQAGRFLQARGATEGTLYLERLSEDQREMEDVFIR-AG 186 Query: 180 DTQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSY-TLQTESAN 234 T + A+ G + D + ++L DG + P + D + +F+ + L E + Sbjct: 187 GTADRVVLAARRGVQEKDPETGDRYLVLLDGWRYDGRPGAADWRVTRFERHGVLVAEGSE 246 Query: 235 SSTIVLKANDQNLSFLLNPN-PNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + L+ N Q + L + P + R+E RL ++ L+++ + Sbjct: 247 EVAVRLRRNAQPTAELWGSDHPAD-----------RAEVQWRLAMPAMTLLLALLAVPLS 295 Query: 294 -DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF--LFCISSIF 350 R + + + + + + G ++ + Q P + + +L + + + Sbjct: 296 KSAPRDGRYGRLLSAVLVYVGYFQFLTVGQDWL--ETGQVPAALGLWWLHGAVLAVGVLG 353 Query: 351 LLMI 354 LL Sbjct: 354 LLWR 357 >gi|254424599|ref|ZP_05038317.1| putative permease, YjgP/YjgQ family [Synechococcus sp. PCC 7335] gi|196192088|gb|EDX87052.1| putative permease, YjgP/YjgQ family [Synechococcus sp. PCC 7335] Length = 397 Score = 139 bits (350), Expect = 8e-31, Method: Composition-based stats. Identities = 60/362 (16%), Positives = 128/362 (35%), Gaps = 25/362 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPT 59 + + YI + + FL I + + + I V+ + S + +I +PT Sbjct: 23 ITIMDRYIAKELTLPFLFGVGAFSSIAVSIGALFELIRKVADAGLSATLAFEIFLLSLPT 82 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + P + T + + ++EL+ + G S ++ P + L++L++ F Sbjct: 83 FTVLAFPMSTLLATMMTYSRFSSDSELIAMRGCGVSINRIVAPAVILSLLVTGLSFSVNE 142 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEEN--LFFRLDDD---------LYIKISKYNPNN 168 II P L A+A E +F + + + ++ Sbjct: 143 IIAPASTERAALLLARALDD-EKPPFREGNIVFQQQEPAADGSGDELVRFFYARNFD-GT 200 Query: 169 TLQGIFIVDSRDTQTH----KIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK 224 T++ I +VD + +I A + + D R +G ++ SP I++F Sbjct: 201 TMRDITVVDFSQEDSEDGLKQIVSADAATWDFTRNLWEFTNGTIYAVSPTGSFRQIIRFD 260 Query: 225 SYTLQT--ESANSSTIVLKANDQNLSFLLN-PNPNNPNYRPELLETYRSEFHKRLTQWLF 281 LQ + + K + N++ + + ++ Sbjct: 261 KQDLQLPRTPLDLANRTKKQEEMNIAETKEYLTILQQTGDEKAVRKLAVAIQRKYAIPFA 320 Query: 282 PVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL 341 V+FGL+ + ++ K IS+ I FG + S+I + ++ P L Sbjct: 321 CVVFGLVGAAVGVRP---QRTGKATSFGISVVIIFGYYL-LSFITSAMGESGVITPFLAG 376 Query: 342 FL 343 ++ Sbjct: 377 WV 378 >gi|262280663|ref|ZP_06058446.1| conserved hypothetical protein [Acinetobacter calcoaceticus RUH2202] gi|262257563|gb|EEY76298.1| conserved hypothetical protein [Acinetobacter calcoaceticus RUH2202] Length = 366 Score = 139 bits (350), Expect = 8e-31, Method: Composition-based stats. Identities = 56/366 (15%), Positives = 131/366 (35%), Gaps = 17/366 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + + L+ + I ++++ + + IL I GY +P L Sbjct: 2 IIRRYLVKQVVSTSLVVISLLTLIMMGGRLIKYFGVAAQGRLDAGILFSIIGYRLPEFLT 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + V + + E+ +++ +G SR L + ++ + ++ + + + Sbjct: 62 LILPLGFFIGLMLVFGRLYVDHEMAVLNGSGVSRHQLARLLIPITLVYMVCQSVLMLWMT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDS--R 179 P ++L+ + F + F I + + L+ IF + Sbjct: 122 PWGLREFEKLTTTQAVRTGFDLVRPREFISSGP-YTIYAGSLSEDRKNLKDIFFYQRAAK 180 Query: 180 DTQTHKIYYAQSGS----IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + + A+ + + + L G + P + +F+SY L+ E+ Sbjct: 181 ADKPDVMILAKEATRVEVANDTANVVDLVQGRRYEIFPGQPKYTQAEFQSYRLRLENDKD 240 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + + L N+P RSE RL +I ++S+ ++ Sbjct: 241 VKFESGDVEALSTTKLFSKTNDPVV--------RSELGWRLFGPFTIIIALMLSVALSEV 292 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + ++ P S + I K E + + P + L ++ I++ + Sbjct: 293 SPRQGRYYRLIPAIFIFSSLIVLMIAIKTRISKEELDIWAYPAV-LVVYGIAAALFSRKQ 351 Query: 356 KKYTKI 361 K KI Sbjct: 352 KLAPKI 357 >gi|255535566|ref|YP_003095937.1| hypothetical protein FIC_01427 [Flavobacteriaceae bacterium 3519-10] gi|255341762|gb|ACU07875.1| membrane protein, putative [Flavobacteriaceae bacterium 3519-10] Length = 484 Score = 138 bits (349), Expect = 8e-31, Method: Composition-based stats. Identities = 42/227 (18%), Positives = 84/227 (37%), Gaps = 7/227 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K + Y+++ FL + FI V I ++ + S +LK+ YL V Sbjct: 2 IKKLDGYVIKSFLGPFLFIFSVLFFIFVVNIIWIQLAQFTGKGLSYWEILKLLAYLSVKV 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V P + + EL + G S ++ P+ ++I LS FLF+ N Sbjct: 62 VQLVLPLTILLSSIMTFGDFGERYELAAMKAAGISLTRIMMPLFVVSIALSFFLFLFSNN 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN--TLQGIFIVDS 178 + P + K + F + +K + N L G+FI Sbjct: 122 VIPDFQRKAKNMLYNIAATKPALNFSPGQFIQQIPGYSVKFDEITGENGENLTGVFIHKM 181 Query: 179 RDT-QTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISI 220 ++ + + A+ G ++L +G + ++ + D + Sbjct: 182 ANSYENQQSIVAEKGKFVQADNRNYLKLVLYNGHIFEENIGNVDYNQ 228 >gi|167752154|ref|ZP_02424281.1| hypothetical protein ALIPUT_00396 [Alistipes putredinis DSM 17216] gi|167660395|gb|EDS04525.1| hypothetical protein ALIPUT_00396 [Alistipes putredinis DSM 17216] Length = 492 Score = 138 bits (349), Expect = 8e-31, Method: Composition-based stats. Identities = 47/259 (18%), Positives = 103/259 (39%), Gaps = 8/259 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ +L+ +++ I+F+ + + + I+ + ++++ Y + Sbjct: 1 MKTIYKLVLKSYLGPMVLTFFIIMFVLMMNVLWRYIDELVGKGLDPGTIIELLCYATINM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +PM P + + ++ N ELL + + G S +++P+L + +L++ F N Sbjct: 61 IPMALPLATLLAAIMTMGNLGENYELLAMKSAGMSLPKIMRPLLVVVSILAVGSFFIANN 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 + P + + ++ LFF D + I++ N L + I D+R Sbjct: 121 LVPYANKKFFRTIYDIRQMNQTLEFQDGLFFNGIDGMSIRVGHQNQETGLLTDVLIYDNR 180 Query: 180 DT-QTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPI-SKDISIMKFKSYTLQTESA 233 + A SG I L I L +GE + ++ S+ + + + + A Sbjct: 181 NASGNMTTTVADSGYIRLSDDKRFLEITLFNGERYEQTRNSSQWYNKSSLQRNKFELQKA 240 Query: 234 NSSTIVLKANDQNLSFLLN 252 N S + + + L N Sbjct: 241 NISISGFEM-QRTDADLFN 258 Score = 38.8 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 50/114 (43%), Gaps = 6/114 (5%) Query: 245 QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKK 304 +N + + + + L + E+HK+L + +IF LI A A+VR+ Sbjct: 346 RNSRSMFSFDESQAKNALNQLYRSKVEWHKKLALPVTIIIFFLIG---APLGAIVRRGGL 402 Query: 305 IHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI--LYLFLFCISSIFLLMIKK 356 PI IS+ I F +++ S K+ + + +L F ++ + + + K Sbjct: 403 GMPIVISV-IFFVIYYIISSSGEKMAKEGTWEAFYGTWLSAFVLAPVAIYLTYK 455 >gi|238019692|ref|ZP_04600118.1| hypothetical protein VEIDISOL_01566 [Veillonella dispar ATCC 17748] gi|237863733|gb|EEP65023.1| hypothetical protein VEIDISOL_01566 [Veillonella dispar ATCC 17748] Length = 363 Score = 138 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 52/370 (14%), Positives = 127/370 (34%), Gaps = 17/370 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPT 59 M+ + YIL+ FL I + + ++ L +++K +P+ Sbjct: 1 MRLLDKYILKAFVGPFLFGVFAFTSIFIGTGTLFRIAQYITEYGAPLLLVMKAFVLALPS 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ + P + + + ++ +E++++ G S + L PV +A+++SI Sbjct: 61 IVILTFPMSVLLASLMTFSRLSSTSEIVVMRAGGLSFLRLAMPVYIIALIISIGAVAFNE 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD----DLYIKISKYNPN-NTLQGIF 174 + P+ + + + + + + ++ + + + YN L I Sbjct: 121 FVVPRTNNMYQTIVREQIMKNASPQTQNHIVLKTMNGNDLGTLMYAKSYNAETKKLSMIT 180 Query: 175 IVDSRDTQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 + + ++ A + + Q ++ +G ++ S MKFK +L +SA Sbjct: 181 VQQFGEGGKLQQVENADTA--VWNGQYWVMQNGIIYDISAGDGVERTMKFKEQSLPIKSA 238 Query: 234 NS--STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 K + + L + E ++R T L +F L+ Sbjct: 239 PKDIQQDQRKPEELTIKELRHQIKAYKAAYTN-ANKLEMEMYQRFTIPLASFVFALVGAP 297 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY-IPILYLFLFCISSIF 350 + +QR F + +++G + + L + I Sbjct: 298 LGLQ----KQRSSSSIGFGISILIIFIYYGVMTFAGALGKGGALPTVFAALIPDTLGIIA 353 Query: 351 LLMIKKKYTK 360 L + + +K Sbjct: 354 GLYLNWRVSK 363 >gi|74316599|ref|YP_314339.1| hypothetical protein Tbd_0581 [Thiobacillus denitrificans ATCC 25259] gi|74056094|gb|AAZ96534.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC 25259] Length = 359 Score = 138 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 50/361 (13%), Positives = 132/361 (36%), Gaps = 16/361 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + + R +G + ++ IA VI ++ + V+ + + G+ + LP Sbjct: 2 LYRRALTREMGLATGAVLTVLIAIALVILFIRLLGDVARGELANEAVFAFLGFSLLYFLP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ L+ M R++E++I N G S ++PVL A+ LS+ + + ++ Sbjct: 62 VLMTISLFAGVLMPLSRMWRDSEMVIWFNAGLSLAQWLRPVLAFAVPLSLVILLLTLVLN 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNP-NNTLQGIFIVDSRD 180 P ++ + + + LF + NP ++ +F+ D Sbjct: 122 PWLQAKKNDYRQDLKARSESALIAPGLFAESGAGERVYYVESLNPLTGIVRNVFMQSRID 181 Query: 181 TQTHKIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 Q + A+ G + + ++ G + +P + D +++F+ Y ++ + + Sbjct: 182 GQLGLVV-AREGDHTELPDGSRYLVFRQGRRYEGTPGTLDYRVVEFERYWMRLDPVATGG 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 ++ LL + R+E RL L ++ +++I + Sbjct: 241 RDTNIRQKSAGDLL----------ADPAPAARAELLWRLGVPLSALVLAVMAIPLSFVNT 290 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 R+ + + + + + + +P+ + +++ L ++ + Sbjct: 291 RARRSYGLVTALLLYFVYNNLLSLTQAWVAQGRFDPWAGMASAHLVMLLAAAGLFYLRSR 350 Query: 358 Y 358 Sbjct: 351 R 351 >gi|119899193|ref|YP_934406.1| hypothetical protein azo2903 [Azoarcus sp. BH72] gi|119671606|emb|CAL95519.1| conserved hypothetical membrane protein [Azoarcus sp. BH72] Length = 359 Score = 138 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 38/263 (14%), Positives = 98/263 (37%), Gaps = 7/263 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F +LR ++ + + I I +++ + + + +L + G+ T +P Sbjct: 2 IFRRALLREFSQTAAAVFVALFAILVTIVLIRLLGQAAGGGVPSDAVLALIGFGALTEMP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V + L+ R++E+++ +G I PVL A+ + + + Sbjct: 62 VVLTLTLFVAVLLTLSRSYRDSEMVVWFASGVPLTAWIGPVLRFALPVVAVIAGMTLFLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP--NNTLQGIFIVDSRD 180 P + + + + +F + + + ++ +F+ D + Sbjct: 122 PWAHMKNAEYRERLESRDDTQRVAPGVFRESAGSRRVFFVEVGAGEDGRVRNVFVSDE-N 180 Query: 181 TQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A G + D + ++L G + P + + +M F+ Y++Q E+ ++ Sbjct: 181 GDRLSVIAAAEGYLKTDEEGNRFVVLEKGRRYDGKPGTPEYRVMSFERYSVQIEAKQAAA 240 Query: 238 IVLKANDQNLSFLLN-PNPNNPN 259 ++ + LL P+ N Sbjct: 241 QPQRSRARPTEELLRSPDDRNLG 263 >gi|187922984|ref|YP_001894626.1| permease YjgP/YjgQ family protein [Burkholderia phytofirmans PsJN] gi|187714178|gb|ACD15402.1| permease YjgP/YjgQ family protein [Burkholderia phytofirmans PsJN] Length = 365 Score = 138 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 58/362 (16%), Positives = 131/362 (36%), Gaps = 16/362 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ + +++ + +S +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTLVLTTMMIRIVGFAASGEIDPRDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT +++E+++ ++G S IKP+ A + I + + Sbjct: 62 IMLVATLFVSILFVLTRWYKDSEMVVWLSSGVSLTQFIKPIGIFATPIIILIMFFVFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLD-DDLYIKISKYNPNN-TLQGIFIVDSRD 180 P K + A+ Q S L F I K + + ++ +F+ + + Sbjct: 122 PWSNQQSKLIRARFQQRDEVSLLAPGQFRESATSHRVFFIEKMSADQARVENVFVTSTEN 181 Query: 181 TQTHKIY--YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + + + + + ++L +G + P D IM+F+ Y ++ +S Sbjct: 182 GKVNVVVSKTGHTETRKNGDRFVVLENGRRYDGQPGQPDFRIMEFERYGVKIQSQPVVNT 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA-DKRA 297 L+ L NP +N +EF R L + L++I A Sbjct: 242 PSTTGTPTLTLLRNPTNDNL-----------AEFAWRAGLPLIAINLMLLAIPLAHQNPR 290 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 R + + I L+ S + S+I P + L++ + I + + + Sbjct: 291 RSRTINLVMAVLIYLTYSNLLNVVQSWIEQGKMSFPVGLVGLHVIVAAIVAFIFWLRVRN 350 Query: 358 YT 359 Sbjct: 351 RP 352 >gi|56461047|ref|YP_156328.1| permease [Idiomarina loihiensis L2TR] gi|56180057|gb|AAV82779.1| Predicted permease [Idiomarina loihiensis L2TR] Length = 363 Score = 138 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 56/360 (15%), Positives = 129/360 (35%), Gaps = 22/360 (6%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 ++ +S L ++ I + ++ ++ S I+ ++ +P +L ++ P Sbjct: 1 MISETLKSQLAVLFILMTIFVSQKFVRVLSDASEGDIPGAIIFQLLSLNLPALLSLILPL 60 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 + + + E+ ++ G S + + L L+++L+I + P Sbjct: 61 SLFLGILLAHGRIYADNEMTVLHACGVSEWYVTRVTLVLSLILAIITASFTLWLVPWSLD 120 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIKISKYNPNNTLQGIFI----VDSRDTQ 182 ++L KA+ + L F + + I + + L+ +F+ + + Q Sbjct: 121 QEQKLEDKARSESGLTALMPGRFQQASNQKAVIFVQRVGDEGDLEEVFVAQHTHNQGELQ 180 Query: 183 THKIYYAQSGSIDLDRQA-IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + + A++G + + L G+ R + +M F SY LQ + +S + K Sbjct: 181 SGSVVMAKTGKVISETTGSQWLELGQGKRYAGDDDSYQMMSFDSYQLQIKEQQASEQLRK 240 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 LL+ +E R+ L L++++A + + Sbjct: 241 LEAYPTVELLSRKEP----------AAIAELQWRIAIPL---AMPLLTLIAVPLSRVNPR 287 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI--LYLFLFCISSIFLLMIKKKYT 359 + K + +L I G F ++ PI L+ F + L ++ K Sbjct: 288 QGKFGRMAPALLIYLGYFL-LLMAAKSAIRDGVIPPIIGLWWIHFILLIFGLALVGKGRP 346 >gi|220932585|ref|YP_002509493.1| permease YjgP/YjgQ family protein [Halothermothrix orenii H 168] gi|219993895|gb|ACL70498.1| permease YjgP/YjgQ family protein [Halothermothrix orenii H 168] Length = 365 Score = 138 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 49/368 (13%), Positives = 125/368 (33%), Gaps = 18/368 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPT 59 MK Y+ R + FL I IL + + ++ L+++ +P Sbjct: 1 MKIIYRYLTRELIMPFLFGVAAFTAIFIGTDILFTLTRLYNNFGVEFTTLVQLFFLKLPP 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ + P M T ++ + E+ G S ++ P L + +++S+ + Sbjct: 61 IIVLTFPMATLMGTLMSFGRLSGDGEITAFRAGGVSVYKIVIPSLLVGLIMSVTTIMVNE 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD------DLYIKISKYNPN-NTLQG 172 ++ P+ Q+ + + + +L D D + ++N + Sbjct: 121 MVVPRANYLYDQIVWEIKNGRKMPATQYDLTLTPLDRKYRRPDYILYTHRFNGETGIMND 180 Query: 173 IFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ--T 230 +++ D + A+ D+ +G ++ + + +KF Y ++ Sbjct: 181 VYLQDYEKGVPVTLIKARKAVWQGDK--WHFYNGNIYYF-KEGERVPALKFNEYVIKQPI 237 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 + + K + L + + R ++H+++ IF L++ Sbjct: 238 YTPRRIGKMNKDIEDMSFKELGEYIQFLEEQGKDTFEERVKYHQKIAIPFASFIFALLAA 297 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISS 348 K R + +S+ + F +++ + + + P +L F Sbjct: 298 PLGIKPR--RSGGTATGMGLSIIVIF-IYYTIMTLGSALGERGTISPFFGAWLQNFIFLI 354 Query: 349 IFLLMIKK 356 + MI + Sbjct: 355 VGGYMIYR 362 >gi|253997571|ref|YP_003049635.1| permease [Methylotenera mobilis JLW8] gi|253984250|gb|ACT49108.1| permease YjgP/YjgQ family protein [Methylotenera mobilis JLW8] Length = 374 Score = 138 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 51/360 (14%), Positives = 126/360 (35%), Gaps = 19/360 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F +++ + + + L ++ I + + L + + + I G+ + LP Sbjct: 2 LFRHSLIKELISTAAGAFLILIGIVVAQRAGTLVRLAAKGILPNDAITTILGFNMVKFLP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 MV + L+ R++E++I + G S ++PVL + +F+ + Sbjct: 62 MVLSLSLFLAVLMTLSRWYRDSEMVIWFSGGLSINNWVRPVLTFIFPVILFILALSLFVM 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNP-NNTLQGIFIVDSRD 180 P S + + + + + +F + + ++ N ++ IF+ + Sbjct: 122 PWATSKGELYRTQLEARDDLATISPGVFKESANGDRVFFMESFDELGNVVKNIFVQTMQH 181 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + I AQ +++ +G+ + S + S F+ Y ++ E+ + Sbjct: 182 QKLGVIVAAQGSRYTEKNGDNFVLMENGKRYEGRRGSAEFSTTTFEKYAIRIEAKEAKEE 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 ++ L++ T ++E RL + +I L++I AL Sbjct: 242 PPSTQSKSTKELVS----------SANSTNKAELQWRLAIPISALILSLLAI---PLSAL 288 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN--PYYIPILYLFLFCISSIFLLMIKK 356 + + ++L I S Q + + + F + L ++ Sbjct: 289 DPRAGRSANFILALVIYIIYNNLLSIFQAWTAQGKLSALVGLWPVHAFFLLLTIYLFRRR 348 >gi|46143410|ref|ZP_00135308.2| COG0795: Predicted permeases [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208575|ref|YP_001053800.1| hypothetical protein APL_1103 [Actinobacillus pleuropneumoniae L20] gi|307246019|ref|ZP_07528101.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307248123|ref|ZP_07530151.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307250354|ref|ZP_07532303.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307252738|ref|ZP_07534629.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307255000|ref|ZP_07536818.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307257154|ref|ZP_07538926.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307259436|ref|ZP_07541161.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307261582|ref|ZP_07543250.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307263771|ref|ZP_07545377.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|126097367|gb|ABN74195.1| hypothetical protein APL_1103 [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|306852954|gb|EFM85177.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306855300|gb|EFM87475.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306857629|gb|EFM89736.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306859770|gb|EFM91792.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306861873|gb|EFM93849.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306864316|gb|EFM96227.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306866372|gb|EFM98235.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306868705|gb|EFN00514.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306870892|gb|EFN02630.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 343 Score = 138 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 48/335 (14%), Positives = 113/335 (33%), Gaps = 21/335 (6%) Query: 26 IAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTE 85 + + Q++ +N S +++L + G +P + + P + L +E Sbjct: 1 MFFSQQLITVLNSAVSGKVPTDLVLSLLGLGMPALAQFMLPLSLFVALLLTLGRFYAESE 60 Query: 86 LLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYL 145 + ++ G + L K FL+I + + + P + ++ A+A+ FS L Sbjct: 61 ITVMRACGIGKSLLTKVAFFLSIFTTALAVYNVFWLTPWAINKQSEMLAEAKSNPRFSAL 120 Query: 146 EENLFFRLDDDLYIKISKYNPN-NTLQGIFIV--DSRDTQTHKIYYAQSGSID---LDRQ 199 F + I N N L I++ D + + A+SG + Q Sbjct: 121 SAGQFMT-AGGYVLFIENINNEQNKLNDIYVFQPDQQKKNRPSVVVAESGQLQGLPNGDQ 179 Query: 200 AIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPN 259 + L + + + D I F SY + + + + L+ Sbjct: 180 ILTLENSTRYEGTANVADFRISHFDSYQAYLGYQDVDSNEKLVQRADFNKLM-------- 231 Query: 260 YRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVF 319 + ++E R L L++++A ++ ++ + + ++ + F Sbjct: 232 --ADQSNEAKAELQWRFALIL---AVPLMALLAVPMSSVNPRQGRFAKVIPAVLLYLIYF 286 Query: 320 WGFSYI-IHKIEQNPYYIPILYLFLFCISSIFLLM 353 S + ++ L + ++M Sbjct: 287 LLQSSLKSSGASGKLDATLLMPLVSIAFFILAMVM 321 >gi|121591520|ref|ZP_01678785.1| inner membrane protein YjgP [Vibrio cholerae 2740-80] gi|121546628|gb|EAX56818.1| inner membrane protein YjgP [Vibrio cholerae 2740-80] Length = 277 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 47/281 (16%), Positives = 96/281 (34%), Gaps = 15/281 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + ++ + S +++L I G +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASDGEIPTSMILSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LA++ + + + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RD 180 P + L + + L++ F R D + N L +F+ RD Sbjct: 122 PWSQDKEAHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLYNVFVAQLAPRD 181 Query: 181 TQTHKIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + ++ SG + RQ I L DG + P D I F SY + Sbjct: 182 SILPSVMFSHSGDVKELSDGRQIITLYDGTRYEGVPTRVDYMITNFDSYDGLIGQREVKS 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQ 278 LLN ++E R++ Sbjct: 242 AERDWEALPTLSLLN----------NADRRAQAELQWRISL 272 >gi|218438808|ref|YP_002377137.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 7424] gi|218171536|gb|ACK70269.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 7424] Length = 434 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 48/373 (12%), Positives = 126/373 (33%), Gaps = 22/373 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + Y+ + F++S + + + N V + LKI Y +P Sbjct: 63 SLMDRYLTSQLIPPFVLSVGIFTSMGVALANLSDLSNKVFEYDLPVIDALKILLYRVPEF 122 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 P + T ++ +EL+ + + G S P + L++++S F+ Sbjct: 123 FAYALPISVLLTTLMTYGRLSSESELIALRSCGISLWRATVPAVILSVIVSGITFVFSEG 182 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF------FRLDDDLYI------KISKYNPNN 168 + P+ ++ K + +++F +L + ++ Sbjct: 183 VVPETNYRATEILVKVLHEERNFWQNKDIFYPNYEEVKLANGQTFRQLKTLFYAEKFDGQ 242 Query: 169 TLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKS--Y 226 ++ + I++ ++I + S + ++ +G V+ + FK + Sbjct: 243 KMRSLTIINWLGDHLNEIVVSDSAQWNANQNIWDFFNGTVYLIDTDKSYKEAVPFKHQQF 302 Query: 227 TLQTESANSSTIVLKANDQNL-SFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIF 285 L E+ +T + NL L + + + + H+++ ++F Sbjct: 303 PLPKEAFEFATQGRNPYEMNLFQALQYKRLLEASGDNKNVRFFDVRIHQKIAFPFVCLVF 362 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFL 343 G++ K + + + +++ I F + ++ P++ +L Sbjct: 363 GIMGAAIGAKPQQMSRGTS---LGLTVGIVFSYYM-LNFFTGSFGMIGLLSPMMAAWLPN 418 Query: 344 FCISSIFLLMIKK 356 I ++KK Sbjct: 419 LFGVGIGGWILKK 431 >gi|50083532|ref|YP_045042.1| hypothetical protein ACIAD0254 [Acinetobacter sp. ADP1] gi|49529508|emb|CAG67220.1| conserved hypothetical protein; putative permease [Acinetobacter sp. ADP1] Length = 366 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 57/362 (15%), Positives = 123/362 (33%), Gaps = 18/362 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + + L+ + I ++++ + + +L I GY +P L Sbjct: 2 IIRRYLVKQVVSTSLVVIALLTLIMMGGRLIKYFGVAAQGRLDAGVLFSIIGYRMPEFLT 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + V + + E+ +++ +G SRI L + ++ LA++ + I + Sbjct: 62 LILPLGFFIGLMLVFGRLYVDHEMAVLNGSGISRIRLGQLLIPLALVFLVIQGILMLWMT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDS--R 179 P QLS+ + F + F I + + L+ IF + Sbjct: 122 PWGLRQFDQLSSSQAVRTGFDLVRPKEFISSGP-YTIYAGDLSEDRKNLKDIFFYQRAQK 180 Query: 180 DTQTHKIYYAQSGSI----DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + + + A+ + + + L G + P S +F+ Y L+ E+ S Sbjct: 181 EGKPDVMILAKEATRVVMENETANVVDLIQGRRYEIYPGKAKYSQAEFQRYRLRLENDKS 240 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 +T + S L N+P SE R+ VI ++++ + Sbjct: 241 ATFETDKVEALPSSKLWNKWNDP--------VIASEMGWRVFGPFTIVIALMMAVALCE- 291 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 RQ + I + + + + L K Sbjct: 292 -VSPRQGRYYRLIPAIFIFASLIVLLIAIRTRISRDELGVWAYPAALAVYGIAAALFSRK 350 Query: 356 KK 357 +K Sbjct: 351 QK 352 >gi|193212373|ref|YP_001998326.1| permease YjgP/YjgQ family protein [Chlorobaculum parvum NCIB 8327] gi|193085850|gb|ACF11126.1| permease YjgP/YjgQ family protein [Chlorobaculum parvum NCIB 8327] Length = 440 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 47/264 (17%), Positives = 91/264 (34%), Gaps = 12/264 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK F+ YIL+ +F + + I+ + + + + + + I+ ++ + Sbjct: 1 MKIFDRYILKTHLGTFFFAFVTIMSVFILSFVTKFLERLIGKGLDFGIIAEVVLLQSAWM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + T + ++EL ++ G S L+ PVL A+ LS+ + N+ Sbjct: 61 VGFAVPMAVLVTTVMAFGVLTNSSELTVMRAGGISIYRLVAPVLLAALALSLMMERYNNV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 + P+ L A L++N F + I + L+ I + D Sbjct: 121 LMPEANYRANALFADITRLKPALGLDKNAFSDMIKGYSIMARDVDNKTGELRDIVLYDRA 180 Query: 180 DTQTHKIYYAQSGSIDLDRQ----AIILNDGEVHRKS-PISKDISIMKFK--SYTLQT-- 230 + A G I+ + L DG++H P M F Y Sbjct: 181 QPDVRTVILAARGKIEFTPDNTHLVLTLEDGQIHELRLPAMDRYRTMSFSKNRYVFDATG 240 Query: 231 --ESANSSTIVLKANDQNLSFLLN 252 + + + S LL Sbjct: 241 YDFERSDEGRRRGGKELSASDLLA 264 Score = 42.3 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 36/97 (37%), Gaps = 6/97 (6%) Query: 262 PELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWG 321 E Y E+HK+ + ++F ++ A + R+ +SL F ++W Sbjct: 338 REDYRKYMIEYHKKYSLAFACLVFAMVG---APLGVMARRGGFGAGAALSL-FFFVLYWV 393 Query: 322 FSYIIHKIEQNPYYIPI--LYLFLFCISSIFLLMIKK 356 KI P ++L ++ L M+ + Sbjct: 394 LMIGGEKIADQGLLSPAVSVWLPNAILTCAGLFMLYR 430 >gi|330938932|gb|EGH42431.1| permease YjgP/YjgQ [Pseudomonas syringae pv. pisi str. 1704B] Length = 375 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 56/358 (15%), Positives = 128/358 (35%), Gaps = 29/358 (8%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ R + + ++ + ++ + +S +L I G+ +P L ++ Sbjct: 5 RYLSREVLLTLSAVSAVLLVFIMSGRFIKYLAQAASGALDPGVLFLIMGFRLPGFLQVIL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + + +E+ ++ TG S+ L+ + A L+ + + + P+ Sbjct: 65 PLGLFLGILMAYGRLYLESEMTVLAATGMSQQRLLAITMGPATLVGLLVAWLSFSLAPQG 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYNPNNT-LQGIFI------VD 177 + L + F L F L D I + + + + L G+FI D Sbjct: 125 ATQFSLLINQQDAMTEFDTLVPGRFQALRDGTRITYTKELSEDRSQLAGVFISEKRMSSD 184 Query: 178 SRDTQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + A+ G ++ +IL +G + +P + D ++K+ +Y Sbjct: 185 KSKDNGITVLVAEKGHQEVRPNGSRFLILENGYRYDGNPGAADYRVIKYDTYGAMLPKPE 244 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 S + S L+ + +E R++ L I L++I Sbjct: 245 ISEEITDREAIPTSELI----------GDPAPRSVAELQWRISLPLSVFIVTLMAIP--L 292 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFL 351 R RQ + + L + ++ + I+ + + + L L ++ + +I+L Sbjct: 293 SRVNPRQGRYLK-----LLPAILLYMSYLAILISVRSSLEKGKLPLSLGMWWVHAIYL 345 >gi|292669943|ref|ZP_06603369.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541] gi|292648414|gb|EFF66386.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541] Length = 366 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 53/373 (14%), Positives = 132/373 (35%), Gaps = 27/373 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPT 59 ++ + YI R + SFL + + + + ++ SL ++KI + +P Sbjct: 5 IRILDKYIFREVFSSFLFAICAFSAVFIGSGTLFRIAQYITDYGASLPSVIKIFVFSLPG 64 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 V+ P + + ++ +E+ + + G + P + L ++S+ Sbjct: 65 VVMWTFPMAMLLASLLTFGRLSSASEITAMKSCGIGFGRIAAPAILLGFIVSVGAIFFNE 124 Query: 120 IIEPKCRSTIKQLSA---------KAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT- 169 + P+ + + + K+Q + +EE RL + Y+ Sbjct: 125 HVVPRANTAYRNVIYYEIEGNSGMKSQEHVIIKEIEEGQIRRL-----VYARSYDAEQER 179 Query: 170 LQGIFIV-DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 L GI + D + + A+ + I+++G+V+ + + M+F++ L Sbjct: 180 LTGISLQVFGDDGKVTHVENAE--YAEWTGTEWIMHNGDVYDIADEHLE-RRMRFETQVL 236 Query: 229 QTESANSSTIVLK--ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFG 286 + I + + + L + + +E ++R++ + +IF Sbjct: 237 PVQKDPRQIIREQKVPEEMTMRELRHQ-IALMQTQYVNTSKLEAELYQRVSVPMASLIFT 295 Query: 287 LISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCI 346 LI + + R + I F ++ + + + P+L +++ I Sbjct: 296 LIGVPLGLQP--TRNSSSAGFAMSVIIIFF--YYALMTMGNAFARGEVLPPMLAVWIPNI 351 Query: 347 SSIFLLMIKKKYT 359 I I + Sbjct: 352 VGIIAGTILLRRA 364 >gi|303230241|ref|ZP_07317009.1| permease, YjgP/YjgQ family [Veillonella atypica ACS-134-V-Col7a] gi|303231004|ref|ZP_07317747.1| permease, YjgP/YjgQ family [Veillonella atypica ACS-049-V-Sch6] gi|302514386|gb|EFL56385.1| permease, YjgP/YjgQ family [Veillonella atypica ACS-049-V-Sch6] gi|302515167|gb|EFL57141.1| permease, YjgP/YjgQ family [Veillonella atypica ACS-134-V-Col7a] Length = 363 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 51/366 (13%), Positives = 128/366 (34%), Gaps = 12/366 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPT 59 M+ + YIL+ FL I + + ++ L +++K +P+ Sbjct: 1 MRLLDKYILKAFVGPFLFGVFAFTSIFIGTGTLFRIAQYITEYGAPLLLVMKAFFLAMPS 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ + P + + + ++ +E++++ G S + L PV LA+L+SI Sbjct: 61 IILLTFPMSVLLGSLMAFSRLSSTSEIVVMRAGGLSFLRLAMPVYILALLISIGAVAFNE 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD----LYIKISKYN-PNNTLQGIF 174 + P+ + + + + + + ++ + + + Y+ + L I Sbjct: 121 FVVPRTNNMYQTIVREEIMKNASPQTQNHIVLKSMNGDNLSTLMYAKHYDSESKKLSMIT 180 Query: 175 IVDSRDTQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 + D ++ A++ + Q +++ G ++ S MKFK L +S+ Sbjct: 181 VQQFNDKGELQQVENAENAE--WNGQVWVMHSGIIYDVSAGEGVERTMKFKEQVLPIKSS 238 Query: 234 NS--STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 + K + + L + E ++R T L +F L+ Sbjct: 239 PNEVQQDQRKPEELTIKELRHQIKAYKAAYTNS-NKLEMEMYQRFTIPLASFVFALVGAP 297 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 ++ + + I +GV + + ++ L I+ ++L Sbjct: 298 LGLQKQRSSSSIGFGISILIIFIYYGVMTFAGALGKGGALPTWMAAMIPDTLGIIAGLYL 357 Query: 352 LMIKKK 357 + Sbjct: 358 NWRVSR 363 >gi|298492659|ref|YP_003722836.1| permease YjgP/YjgQ family protein ['Nostoc azollae' 0708] gi|298234577|gb|ADI65713.1| permease YjgP/YjgQ family protein ['Nostoc azollae' 0708] Length = 391 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 54/374 (14%), Positives = 129/374 (34%), Gaps = 18/374 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + Y+ + FL + + + + + V S +NI LK+ +P V Sbjct: 19 SIMDRYLAMQLLPLFLFGVGAFTSVVLAIDSLFELLRKVVESGLPINIALKVFILKLPYV 78 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + T + ++ +EL+ + G S ++ + L+ L++ +I Sbjct: 79 MVYSFPMSTLLATLMTYSRLSSESELIALRGCGVSVYRMVLTAVLLSSLVTAMTYIFNEQ 138 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF------FRLDDDLY-------IKISKYNPN 167 I P + +A + S+ + N++ + D +++ Sbjct: 139 IAPAANYEATRTLEQALKSDKPSFKQHNIYYPEYREVKEKDGSTTKILSRLFYADQFD-G 197 Query: 168 NTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 +QG+ I+D ++I ++S + ++ +G ++ +P +I++F+ Sbjct: 198 KQMQGLTIIDRSREGLNQILVSESAQWNASQKVWNFYNGTIYLVAPDRSYRNILRFEHQQ 257 Query: 228 LQT--ESANSSTIVLKANDQNLSFLLNP-NPNNPNYRPELLETYRSEFHKRLTQWLFPVI 284 LQ N + + N+S L P+ + +++ +I Sbjct: 258 LQLPRTPLNLAENSRDYGEMNISQALQQLEVERLAGNPQKIRKLEVRIQQKIAFPFVCII 317 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 FGL+ + I + + + + +P L Sbjct: 318 FGLVGSAMGTIPQRTGRGTSFGISVIVIFSYYLLLSVSGALAQADILSPLIGAWLPNSFG 377 Query: 345 CISSIFLLMIKKKY 358 ++ +FLLM + Sbjct: 378 LVTGLFLLMRVAQR 391 >gi|229588597|ref|YP_002870716.1| putative ABC transporter membrane protein [Pseudomonas fluorescens SBW25] gi|229360463|emb|CAY47320.1| putative ABC transport system, membrane protein [Pseudomonas fluorescens SBW25] Length = 372 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 62/356 (17%), Positives = 123/356 (34%), Gaps = 26/356 (7%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ R + + ++ I + ++ + +S L I G+ +P L ++ Sbjct: 5 RYLSREVLLTLSAVSAVLLVIIMSGRFVKYLAQAASGALDPGSLFLIMGFRLPGFLQLIL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + + +E+ ++ TG S+ L+ + A +++ + + P+ Sbjct: 65 PLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLLGMTMIPAAGVALIVAWLSLSLAPQG 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNN-TLQGIFIVDSR---- 179 + + K F LE F L+D + L G+FI + R Sbjct: 125 AMQFQLVLNKQDAMTEFDTLEPGRFQALNDGSRVTYTETLTDDRANLGGVFISEKRLGQD 184 Query: 180 -DTQTHKIYYAQSGS--IDLDRQ-AIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + + A SG + D +IL +G + SP D +K+ +Y + + Sbjct: 185 KKDRGISVLVADSGRQEVRPDGSRYLILENGYRYDGSPGMADYRAIKYDTYGVMLARPDI 244 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 S V + L N ++ RL+ L I L+++ A Sbjct: 245 SDEVTDRDAIPTMDLFGSNE----------LRSIAQLQWRLSLPLLVFIVTLMAVPLA-- 292 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 R RQ + + + L + + H + P L L+ + IFL Sbjct: 293 RVNPRQGRFLKLLPAIL--LYMAYLTMLISAHGAVEKGKLSPTL--GLWWVHGIFL 344 >gi|313894646|ref|ZP_07828209.1| permease, YjgP/YjgQ family [Veillonella sp. oral taxon 158 str. F0412] gi|313440836|gb|EFR59265.1| permease, YjgP/YjgQ family [Veillonella sp. oral taxon 158 str. F0412] Length = 363 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 53/370 (14%), Positives = 128/370 (34%), Gaps = 17/370 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPT 59 M+ + YIL+ FL I + + ++ L +++K +P+ Sbjct: 1 MRLLDKYILKAFVGPFLFGVFAFTSIFIGTGTLFRIAQYITEYGAPLLLVMKAFVLALPS 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ + P + + + ++ +E++++ G S + L PV +A+++SI Sbjct: 61 IVILTFPMSVLLASLMTFSRLSSTSEIVVMRAGGLSFLRLAMPVYIIALMISIGAVAFNE 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD----DLYIKISKYNPN-NTLQGIF 174 + P+ + + + + + ++ + + + YN L I Sbjct: 121 FVVPRTNHMYQTIVREEIMKNATPQTQNHIVLKAMNGDELGTLMYAKSYNAETKQLSMIT 180 Query: 175 IVDSRDTQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 + + ++ A + + Q ++ +G ++ S MKFK +L +SA Sbjct: 181 VQQFGEGGKLQQVENADTA--IWNGQYWVMQNGIIYDVSAGDGVERTMKFKEQSLPIKSA 238 Query: 234 NS--STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 K + + L + E ++R T L +F L+ Sbjct: 239 PKDIQQDQRKPEELTIKELRHQIKAYKAAYTN-ANKLEMEMYQRFTIPLASFVFALVGAP 297 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL-YLFLFCISSIF 350 + +QR F + +++G + + +L L + I Sbjct: 298 LGLQ----KQRSSSSIGFGISILIIFIYYGVMTFAGALGKGGALPTVLAALIPDTLGIIA 353 Query: 351 LLMIKKKYTK 360 L + + +K Sbjct: 354 GLYLNWRVSK 363 >gi|294795168|ref|ZP_06760302.1| putative membrane protein, YjgP/YjgQ family [Veillonella sp. 3_1_44] gi|294453960|gb|EFG22335.1| putative membrane protein, YjgP/YjgQ family [Veillonella sp. 3_1_44] Length = 363 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 52/370 (14%), Positives = 127/370 (34%), Gaps = 17/370 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPT 59 M+ + YIL+ FL I + + ++ L +++K +P+ Sbjct: 1 MRLLDKYILKAFVGPFLFGVFAFTSIFIGTGTLFRIAQYITEYGAPLVLVMKAFVLALPS 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ + P + + + ++ +E++++ G S + L PV +A+++SI Sbjct: 61 IVILTFPMSVLLASLMTFSRLSSTSEIVVMRAGGLSFLRLAMPVYIIALIISIGAVAFNE 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD----DLYIKISKYNPN-NTLQGIF 174 + P+ + + + + + + ++ + + + YN L I Sbjct: 121 FVVPRTNNMYQTIVREQIMKNASPQTQNHIVLKTMNGNDLGTLMYAKSYNAETKKLSMIT 180 Query: 175 IVDSRDTQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 + + ++ A + + Q ++ +G ++ S MKFK +L +SA Sbjct: 181 VQQFGEGGKLQQVENADTA--VWNGQYWVMQNGIIYDISAGDGVERTMKFKEQSLPIKSA 238 Query: 234 NS--STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 K + + L + E ++R T L +F L+ Sbjct: 239 PKDIQQDQRKPEELTIKELRHQIKAYKAAYTN-ANKLEMEMYQRFTIPLASFVFALVGAP 297 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY-IPILYLFLFCISSIF 350 + +QR F + +++G + + L + I Sbjct: 298 LGLQ----KQRSSSSISFGISILIIFIYYGVMTFAGALGKGGALPTVFAALIPDTLGIIA 353 Query: 351 LLMIKKKYTK 360 L + + +K Sbjct: 354 GLYLNWRVSK 363 >gi|107103348|ref|ZP_01367266.1| hypothetical protein PaerPA_01004417 [Pseudomonas aeruginosa PACS2] Length = 362 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 52/354 (14%), Positives = 130/354 (36%), Gaps = 25/354 (7%) Query: 12 IGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAM 71 + + ++ I + ++ + + L I + IP L ++ P + Sbjct: 1 MLVTMSAVSAVLLVIIMSGRFIKYLAQAAQGLLDPGSLFLIMAFRIPGFLQLILPLGLFL 60 Query: 72 ETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQ 131 + +E+ ++ TG S+ L+ + A+L++I + + P+ + Sbjct: 61 GILLAYGRLYLESEMTVLSATGMSQKRLLGYTMAPALLVAILVAWLSLFLAPQGINQFAL 120 Query: 132 LSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYNPN-NTLQGIFIVDSR-----DTQTH 184 L K F L F + D + + + + L GIFI + Sbjct: 121 LLNKQDTLTEFDTLVPGRFQAMRDGTRVTYTEELSKDRGELAGIFISQKDLNSSNQERGI 180 Query: 185 KIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 I A+ G+ ++ +IL++G + +P + +++ +Y + +S+ V + Sbjct: 181 SILVAEKGTQNIQADGSRYLILHNGYRYDGNPGQANYRAIQYDTYGVMLPKPEASSEVSE 240 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + + L + Y++E RL+ L + L+++ R RQ Sbjct: 241 RDAVPTADLFGSDNP----------RYQAELQWRLSTPLLVFVVTLLAVP--LSRVNPRQ 288 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQN--PYYIPILYLFLFCISSIFLLM 353 + + + ++ + G + ++++ P I + ++ ++ LL Sbjct: 289 GRFLK-LLPAILLYMGYLALLIAVRGQLDKGKIPMAIGLWWVHGLFLAIGLLLF 341 >gi|312959168|ref|ZP_07773687.1| permease YjgP/YjgQ [Pseudomonas fluorescens WH6] gi|311286938|gb|EFQ65500.1| permease YjgP/YjgQ [Pseudomonas fluorescens WH6] Length = 372 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 52/308 (16%), Positives = 106/308 (34%), Gaps = 22/308 (7%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ R + + ++ I + ++ + +S L I G+ +P L ++ Sbjct: 5 RYLSREVLLTLSAVSAVLLVIIMSGRFVKYLAQAASGALDPGSLFLIMGFRLPGFLQLIL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + + +E+ ++ TG S+ L+ + A +++ + + P+ Sbjct: 65 PLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLLGMTMIPAAGVALVMAWLSLSLAPQG 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYNPNN-TLQGIFIVDSRDTQT 183 + L K F LE F L+D + + L G+FI + Sbjct: 125 AMQFQLLLNKQDAMTEFDTLEPGRFQALNDGTRVTYTETMTDDRANLGGVFISQKNQGEN 184 Query: 184 H-----KIYYAQSGS--IDLDRQ-AIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 I A SG + D ++L +G + SP D +K+ +Y + + Sbjct: 185 QKDRGISILVADSGRQEVRPDGSRYLVLENGYRYDGSPGLADYRAIKYDTYGVMLARPDI 244 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 S V + + L +E R++ L I L+++ Sbjct: 245 SEEVTDRDALPTASLF----------GSQELRSIAELQWRISLPLLVFIVTLMAVP--LS 292 Query: 296 RALVRQRK 303 R RQ + Sbjct: 293 RVNPRQGR 300 >gi|323492969|ref|ZP_08098107.1| hypothetical protein VIBR0546_19372 [Vibrio brasiliensis LMG 20546] gi|323312800|gb|EGA65926.1| hypothetical protein VIBR0546_19372 [Vibrio brasiliensis LMG 20546] Length = 367 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 52/354 (14%), Positives = 130/354 (36%), Gaps = 23/354 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L + + ++++ + S ++++ +P++ Sbjct: 2 IIVRYLIRETLKSQLAIFFILFLVFLSQKLIKVLADASDGDIPASLVMHYVALSMPSMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LA++ + + + Sbjct: 62 LMLPLSLFLGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLAVITGVIAGFNSFVFS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNTLQGIFIVDS--R 179 P + + QL + + + L++ F D + I + L+ +F+ R Sbjct: 122 PYSQDKLVQLQEEVEAENSVDLLKKGHFQGTPDGSSVVFIDDID-GKQLKHVFVAQMRPR 180 Query: 180 DTQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 D+ + ++QSG + RQ I + DG + P D + KF Y + Sbjct: 181 DSILPSVSFSQSGEVKELSDGRQVIRMYDGTRYEGVPTRVDYMVTKFDQYEGLIGQRDVK 240 Query: 237 TIVLKANDQNLSFLL-NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 L+ NP+P ++E R++ V L++++ Sbjct: 241 RKGRDWEAIPTLELMKNPDP-----------RAQAELQWRIS---LVVCIPLLTMLVVPL 286 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 A+ ++ + + ++ I F S ++ I+ ++ + + Sbjct: 287 SAVNPRQGRFAKMGPAILIYLAYFLSIS-ATKSALEDGSIPAIIGMWPINAALL 339 >gi|319955107|ref|YP_004166374.1| permease yjgp/yjgq family protein [Cellulophaga algicola DSM 14237] gi|319423767|gb|ADV50876.1| permease YjgP/YjgQ family protein [Cellulophaga algicola DSM 14237] Length = 493 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 44/246 (17%), Positives = 95/246 (38%), Gaps = 15/246 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + Y+L +F S ++ I I I+ ++ + I+LK Y++P + Sbjct: 1 MRILDRYLLSRFLYNFFSSFAILMLIFVFQTIWLFIDDLAGRGLDVMIILKFLFYIMPNL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + + S+ N E + +G S ++P++ +L + +F N Sbjct: 61 MEKVLPLTVLLASILTFGSIAENYEFAAMKASGISLQRSMRPLIIFVCILGVVVFYFANS 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIKISKYNPNNT--LQGIFIVD 177 + P I L + + E F L+ ++ +K+ + +N L+ + I Sbjct: 121 VIPASEQKIYNLRKNIGQVKPSTAIVEGAFSDLEGTNMNMKVDRKYGDNDRFLENVIIHR 180 Query: 178 SRDTQTHKIYY-AQSGSIDLDRQA----IILNDGEVHRKSPISKD-------ISIMKFKS 225 D + A++G + + ++L DG + K + F+ Sbjct: 181 KSDNSINNTVIKAKTGELVSSEGSDILKLVLRDGHYYEDITKKKSTENRKYPFAKSSFEI 240 Query: 226 YTLQTE 231 YT+ + Sbjct: 241 YTINQD 246 Score = 36.1 bits (82), Expect = 7.8, Method: Composition-based stats. Identities = 12/104 (11%), Positives = 41/104 (39%), Gaps = 6/104 (5%) Query: 255 PNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSI 314 + + R ++ + HK+ L ++ V A A++R+ P+ +++ + Sbjct: 365 KDELDKRYKIYNMHIVSLHKKFALGLSCIVLF---FVGAPLGAIIRKGGLGVPMVVAILL 421 Query: 315 SFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMIKK 356 ++ + + ++ PI+ + + + + + K+ Sbjct: 422 FLTYYFIGVFSENYA-KDGNMSPIIGAWTSTLIMLPLGVFLTKR 464 >gi|300114327|ref|YP_003760902.1| permease YjgP/YjgQ family protein [Nitrosococcus watsonii C-113] gi|299540264|gb|ADJ28581.1| permease YjgP/YjgQ family protein [Nitrosococcus watsonii C-113] Length = 383 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 54/360 (15%), Positives = 129/360 (35%), Gaps = 24/360 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + YIL+ + + L ++ I I+ ++ ++ + +L +SGY L Sbjct: 6 IVDRYILKELSLNATAITLVLLLIFGGIRFIRFLSQATKGKVPGEAILALSGYEAIGALV 65 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L M + E++ + G SR L++ VL ++L+I + + Sbjct: 66 LLLPLASFLAVLLALGRMGADNEVIALFACGVSRRHLLRVVLTFGLVLAIGVGSISLYLG 125 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNT-LQGIFIVDSRD 180 P + +L +A LA S L F + ++ +FI + Sbjct: 126 PAASAEGYRLKQQALLAAETSGLVAGNFKESQHGQRVFYAESLTEDGLGMKNVFIQVW-E 184 Query: 181 TQTHKIYYAQSGSIDLD----RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 ++ A +G + D + +IL DG + I I +F+ + + + Sbjct: 185 PTQKTLFRAATGHLQTDEGTGDKHLILEDGYRYDLMGEEVGIRIFRFERHGILVKKGGMQ 244 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 ++ L +E R++ + ++ ++++ A R Sbjct: 245 EFRIRHQTLPTLTLWEMGAP----------KDIAEIQWRISMPITTLLLVMLAVPLA--R 292 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN--PYYIPILYL--FLFCISSIFLL 352 + RQ + + ++ + + +E P ++ + ++ + + I L Sbjct: 293 SGPRQGRY-AGLLPAVLVYVIYSNMLGIARNWVEHEVIPAFLGLWWIHALMLLVVLISLW 351 >gi|223938399|ref|ZP_03630293.1| permease YjgP/YjgQ family protein [bacterium Ellin514] gi|223892968|gb|EEF59435.1| permease YjgP/YjgQ family protein [bacterium Ellin514] Length = 383 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 78/388 (20%), Positives = 144/388 (37%), Gaps = 38/388 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRIN-LVSSSTESLNILLKISGYLIPT 59 MK Y++R + + +M+ F+ + L+ I L+ + +L +++ G LIP Sbjct: 1 MKILHTYLIRQVLATLMMTVAVFTFVLLLGNGLKEILVLIINRQATLGGVIQAFGLLIPF 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 VL P V + + EL + ++G S ++LI P+L L+++L Sbjct: 61 VLVFALPMGMLTAALLVFGRFSADQELTAVKSSGVSLLSLITPILGLSLVLCGVSAAINM 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 I P+CR L + + + L +++F + I + + N L I I Sbjct: 121 EIAPRCRIAYLDLRDEMVGKVAGAALPDSIFVKDFPGFLIYVGASDGKN-LTDIHICQLD 179 Query: 180 DTQTHKIYY-AQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + K A G + ++ ++ L D + S + S L + NS+ Sbjct: 180 ENDKVKTMTDAPKGLLQRSGNQTSLELFDARIFDVQSGSWAYPGIV--SQDLSSIKTNST 237 Query: 237 TIVLKANDQNLSFLLNPN---------PNNPNYRPELLET--------------YRSEFH 273 + + D L N P + EL + R + H Sbjct: 238 SKNIHIGDMTFRQLQNELQVVENEFAVPEKAGSKAELQQRRDILANKKKDVTMPIRVQMH 297 Query: 274 KRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP 333 +++ F LI I +R+ I +SL++ V++ F + E P Sbjct: 298 RQVAFSFACFGFTLIGI---PLGIQAHRRETNVGIAMSLALVL-VYYSFIILGQSFEGRP 353 Query: 334 YYIP--ILYL--FLFCISSIFLLMIKKK 357 Y P IL++ FLF +L + Sbjct: 354 YLAPHLILWIPNFLFQAIGAVMLWRANR 381 >gi|282901534|ref|ZP_06309456.1| permease YjgP/YjgQ [Cylindrospermopsis raciborskii CS-505] gi|281193577|gb|EFA68552.1| permease YjgP/YjgQ [Cylindrospermopsis raciborskii CS-505] Length = 388 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 52/370 (14%), Positives = 134/370 (36%), Gaps = 20/370 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + Y+ + FL + + + + + V S +NI LK+ +P V Sbjct: 16 SIMDRYLAMQLLPIFLFGVGAFTSVVLAIDSLFELLRKVVESGLPINIALKVFVLKLPYV 75 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + T + ++ ++EL+ + G S ++ + L+ L++ +I Sbjct: 76 MVYSFPMSTLLATLMTYSKLSSDSELIALRGCGVSVYRIVLTAVLLSGLVTGMTYIFNEY 135 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFF------RLDDD-------LYIKISKYNPN 167 I P +A + S+ ++N+++ + D +++ Sbjct: 136 ISPAANYEASVTLERALKSDQPSFKQQNIYYPEYREEKTKDGGSSRLLARLFYADEFD-G 194 Query: 168 NTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 ++G+ I+D ++I ++S + +Q +G ++ +P +I++F+ Sbjct: 195 KKMKGLTIIDRSQAGVNQIVVSESAQWNAYKQVWDFYNGTIYLVAPDRSYRNILRFEHQQ 254 Query: 228 LQTESANS--STIVLKANDQNLSFLLNPNP-NNPNYRPELLETYRSEFHKRLTQWLFPVI 284 LQ S + + N++ L P+ ++ +++ +I Sbjct: 255 LQLPSTPLIVAKNSRDYEEMNIAQSLQQLEIEKLAGNPQRIKKLEVRIQQKIAFPFICII 314 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 FGL+ + + I + I + + + +P+ +L Sbjct: 315 FGLVGSAMGTIPQRTGRGRSFGVSIIVIFIYYLLLSVCGALAQAEILSPFVGA--WLPNL 372 Query: 345 CISSIFLLMI 354 C + +L++ Sbjct: 373 CGLGMGILIL 382 >gi|220907915|ref|YP_002483226.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 7425] gi|219864526|gb|ACL44865.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 7425] Length = 389 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 52/370 (14%), Positives = 135/370 (36%), Gaps = 17/370 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y+L + +F+ S I V + + + + L++LL++ +P + Sbjct: 22 LLDRYVLSALLTAFVFSVAAFTGIGVAVGVVFDLVQDFADAQIPLSLLLQLLWLQLPYTI 81 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + + + ++ ++EL+ + + G L+ PV+ +L+ F + Sbjct: 82 SFCLPLGVLLASLSTFNRLSADSELVALQSVGVGIYRLVLPVVLFGLLVGGLAFGFNTSL 141 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-----DLYIKISKYNPNNTLQGIFIV 176 P RS QL + +N+F+ +++ + G+ ++ Sbjct: 142 VPASRSQSSQLLQEVVQQGQAVTQAQNIFYPEYGPDREIQRLFYARQFD-GQQMYGLTVL 200 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 D T +++ A+S D +G ++ +I++F LQ + Sbjct: 201 DFSQTGVNQVITAESAVWDSTISVWTFTNGTIYLVDADGSYRNILQFTEQQLQIPRDPLA 260 Query: 237 TIVLKA--NDQNLSFLLNPNPN-NPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 K ++ +L+ P+ P + + ++ +I + ++ A Sbjct: 261 LATPKPSISEMSLAEARRYLEQLQPDGDPREIRKLQLYIQQQYAIPWQGLI---LGLIGA 317 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL---FCISSIF 350 + R+K +SL I F + S++ + ++ P++ + + Sbjct: 318 GLGIKSQPRRKSRGFGLSLVIIFAQYV-LSFLTAALARSGGLSPLVAAWSVNGLGLGVAL 376 Query: 351 LLMIKKKYTK 360 L+++ + + Sbjct: 377 WLLLRAAHGR 386 >gi|16330198|ref|NP_440926.1| hypothetical protein slr0882 [Synechocystis sp. PCC 6803] gi|1652686|dbj|BAA17606.1| slr0882 [Synechocystis sp. PCC 6803] Length = 394 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 50/374 (13%), Positives = 128/374 (34%), Gaps = 18/374 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPT 59 + + Y+ + F+ +A + + + V+ S ++I +KI +P Sbjct: 20 LSVMDRYLFVELFLPFIFGMGMFTSLALSIGTLFDLVRRVTESGLPMDIAVKILFLKMPE 79 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + + P + + + ++ ++EL+ + + G S L+ P L I+++ F+ + Sbjct: 80 FVVLAFPMSMLLASLMAYSRLSSDSELIALRSIGVSIYRLVVPALLFGIVVTGIAFVFND 139 Query: 120 IIEP-KCRSTIKQLSAKAQLALTFSYLEE------NLFFRLDDD------LYIKISKYNP 166 I P + L + + + D + ++N Sbjct: 140 RITPAASYEALATLDRAIHQDRPPRQEQNIIYPEYGMVRQPDGNEKNILKRLFYAEEFN- 198 Query: 167 NNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSY 226 + ++G+ I+D + +++ A+ S ++ DG V+ +P +I++F+ Sbjct: 199 GSEMKGLTILDRTQSGVNQVLTAERASWNISENTWDFYDGTVYLIAPDGSYRNIVRFRHQ 258 Query: 227 TLQTESANSSTIVLKANDQNLSFLLNP---NPNNPNYRPELLETYRSEFHKRLTQWLFPV 283 L A + D ++ + + + + K+ Sbjct: 259 QLALPRAPLDLASQERKDGEMTIAQSRRYLEVLRLSGDDKKVRKLEVRIQKKYALPFVCF 318 Query: 284 IFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 +FGLI + + + + + + + +P+ L FL Sbjct: 319 VFGLIGAAIGVRPQNTNKATSFGICVGLIFFYYLLSFLSESMGIWGALDPFTAAWLPNFL 378 Query: 344 FCISSIFLLMIKKK 357 I+ LL+ + Sbjct: 379 GLIAGTILLVQSSR 392 >gi|261345122|ref|ZP_05972766.1| inner membrane protein YjgP [Providencia rustigianii DSM 4541] gi|282566810|gb|EFB72345.1| inner membrane protein YjgP [Providencia rustigianii DSM 4541] Length = 365 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 56/358 (15%), Positives = 136/358 (37%), Gaps = 21/358 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + + + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFVLLLIFFSQMSIDILGAAVQGNIPSNLVLPLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + + +E+ ++ G + L+K L LA+L ++ + + Sbjct: 62 LILPLSLFLGLLMTYSKLYTESEITVMHACGLGKNVLVKAALVLAVLTALVAIANITWML 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLF-FRLDDDLYIKISKYNPNNTLQGIFIVDSR-- 179 P +Q+ A+ + + E F D++ + I + N + +F+ R Sbjct: 122 PWSSQYKEQVLGDAKANPGLAAMVEGQFKTTKDNNFVLYIGEV-KGNDFKNVFLAQLRTA 180 Query: 180 DTQTHKIYYAQSGSIDLD---RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + Q + A SG + D RQ ++L+ G + + + +D I F +Y + + Sbjct: 181 NEQRPSVVVADSGYMKEDANGRQVVVLDQGTRYEGTALLRDFRITDFMNYQAVVDHRTTE 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 K + + L N N N +EFH RLT V+ L+ Sbjct: 241 VRTDKVEQKTMMQLWNGNDPEIN----------AEFHWRLTIVFSVVVMALM---VVPLS 287 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-NPYYIPILYLFLFCISSIFLLM 353 + ++ ++ + ++ + F S + + ++ + ++ ++ +++ Sbjct: 288 EVNPRQGRVLSMIPAMLLYLIFFLLQSTLRNSADKGDIDPKYAMWAVNLGYLALAIVL 345 >gi|182413236|ref|YP_001818302.1| permease YjgP/YjgQ family protein [Opitutus terrae PB90-1] gi|177840450|gb|ACB74702.1| permease YjgP/YjgQ family protein [Opitutus terrae PB90-1] Length = 384 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 58/385 (15%), Positives = 136/385 (35%), Gaps = 34/385 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQ-RINLVSSSTESLNILLKISGYLIPT 59 M + Y+ + + + + FI V +L+ + V + SL + ++ L+P Sbjct: 1 MNLLDRYLFKSVLFTCAAAVALFTFIVLVPNVLRDMLAYVLTGQLSLLVFARLVFTLLPL 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 L P L ++ ++E+ + G S +++P+L LA + S Sbjct: 61 ALSYALPMGMLTGVLLTLGRLSADSEVTAMRAVGLSIPRIVRPILLLAAMGSALGIYLNF 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 P+ R ++ A A A + + F R + + + ++ ++ + Sbjct: 121 ESMPRARVEYERGFAAAIQANPLNLIVPKTFIRSFPGYVVYVGEK-QGGIMRDFWLWELD 179 Query: 180 -DTQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKD--------ISIMKFKSY 226 + + + A SG D D + L +V ++ + + S+ ++ Sbjct: 180 AEGRVERFVRAASGRFDYDEPNNSLMLTLTQAKVESRAKENPERFEKPQLVASLGQWGPI 239 Query: 227 TLQTESANSSTIVLKANDQNLSF----------LLNPNPNNPNYRPELLET---YRSEFH 273 L ++ + +++ P P + + T FH Sbjct: 240 QLSLNRFFGRNAGIRMKQEWMTYGQLQAEGERLAAQPLPADAAEAKQARRTRMKLAIVFH 299 Query: 274 KRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP 333 ++ L LI + K + R++ F V++ + +I ++++P Sbjct: 300 DKINTALAVFSLALIGVPLGIKVS----RRETSANFAVAVGITLVYYLMTVVIKVLDRHP 355 Query: 334 YYIP--ILYLFLFCISSIFLLMIKK 356 Y P +L+L F + L ++ + Sbjct: 356 EYRPDLLLWLPNFILIGFGLWLMAR 380 >gi|22124660|ref|NP_668083.1| hypothetical protein y0747 [Yersinia pestis KIM 10] gi|45440496|ref|NP_992035.1| hypothetical protein YP_0644 [Yersinia pestis biovar Microtus str. 91001] gi|51594884|ref|YP_069075.1| membrane protein, permease [Yersinia pseudotuberculosis IP 32953] gi|108808932|ref|YP_652848.1| hypothetical protein YPA_2941 [Yersinia pestis Antiqua] gi|108810813|ref|YP_646580.1| hypothetical protein YPN_0648 [Yersinia pestis Nepal516] gi|145600504|ref|YP_001164580.1| hypothetical protein YPDSF_3250 [Yersinia pestis Pestoides F] gi|153948230|ref|YP_001402496.1| permease [Yersinia pseudotuberculosis IP 31758] gi|153997518|ref|ZP_02022618.1| putative membrane protein [Yersinia pestis CA88-4125] gi|162420063|ref|YP_001608339.1| hypothetical protein YpAngola_A4048 [Yersinia pestis Angola] gi|165925825|ref|ZP_02221657.1| putative permease [Yersinia pestis biovar Orientalis str. F1991016] gi|165936618|ref|ZP_02225185.1| putative permease [Yersinia pestis biovar Orientalis str. IP275] gi|166010128|ref|ZP_02231026.1| putative permease [Yersinia pestis biovar Antiqua str. E1979001] gi|166214282|ref|ZP_02240317.1| putative permease [Yersinia pestis biovar Antiqua str. B42003004] gi|167398727|ref|ZP_02304251.1| putative permease [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420598|ref|ZP_02312351.1| putative permease [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423158|ref|ZP_02314911.1| putative permease [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170025893|ref|YP_001722398.1| permease YjgP/YjgQ family protein [Yersinia pseudotuberculosis YPIII] gi|186893894|ref|YP_001871006.1| permease YjgP/YjgQ family protein [Yersinia pseudotuberculosis PB1/+] gi|218930456|ref|YP_002348331.1| hypothetical protein YPO3440 [Yersinia pestis CO92] gi|229839084|ref|ZP_04459243.1| conserved inner membrane protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229896572|ref|ZP_04511739.1| conserved inner membrane protein [Yersinia pestis Pestoides A] gi|229899647|ref|ZP_04514788.1| conserved inner membrane protein [Yersinia pestis biovar Orientalis str. India 195] gi|229901016|ref|ZP_04516140.1| conserved inner membrane protein [Yersinia pestis Nepal516] gi|270489196|ref|ZP_06206270.1| inner membrane family protein [Yersinia pestis KIM D27] gi|294505144|ref|YP_003569206.1| hypothetical protein YPZ3_3035 [Yersinia pestis Z176003] gi|21957469|gb|AAM84334.1|AE013676_7 hypothetical protein y0747 [Yersinia pestis KIM 10] gi|45435353|gb|AAS60912.1| putative membrane protein [Yersinia pestis biovar Microtus str. 91001] gi|51588166|emb|CAH19772.1| putative membrane protein, permease [Yersinia pseudotuberculosis IP 32953] gi|108774461|gb|ABG16980.1| membrane protein [Yersinia pestis Nepal516] gi|108780845|gb|ABG14903.1| putative membrane protein [Yersinia pestis Antiqua] gi|115349067|emb|CAL22029.1| putative membrane protein [Yersinia pestis CO92] gi|145212200|gb|ABP41607.1| membrane protein [Yersinia pestis Pestoides F] gi|149289155|gb|EDM39235.1| putative membrane protein [Yersinia pestis CA88-4125] gi|152959725|gb|ABS47186.1| putative permease [Yersinia pseudotuberculosis IP 31758] gi|162352878|gb|ABX86826.1| putative permease [Yersinia pestis Angola] gi|165915267|gb|EDR33877.1| putative permease [Yersinia pestis biovar Orientalis str. IP275] gi|165922437|gb|EDR39614.1| putative permease [Yersinia pestis biovar Orientalis str. F1991016] gi|165991035|gb|EDR43336.1| putative permease [Yersinia pestis biovar Antiqua str. E1979001] gi|166204514|gb|EDR48994.1| putative permease [Yersinia pestis biovar Antiqua str. B42003004] gi|166961404|gb|EDR57425.1| putative permease [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051231|gb|EDR62639.1| putative permease [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057328|gb|EDR67074.1| putative permease [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169752427|gb|ACA69945.1| permease YjgP/YjgQ family protein [Yersinia pseudotuberculosis YPIII] gi|186696920|gb|ACC87549.1| permease YjgP/YjgQ family protein [Yersinia pseudotuberculosis PB1/+] gi|229682355|gb|EEO78447.1| conserved inner membrane protein [Yersinia pestis Nepal516] gi|229687139|gb|EEO79214.1| conserved inner membrane protein [Yersinia pestis biovar Orientalis str. India 195] gi|229695450|gb|EEO85497.1| conserved inner membrane protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700350|gb|EEO88382.1| conserved inner membrane protein [Yersinia pestis Pestoides A] gi|262367137|gb|ACY63694.1| hypothetical protein YPD8_3022 [Yersinia pestis D182038] gi|270337700|gb|EFA48477.1| inner membrane family protein [Yersinia pestis KIM D27] gi|294355603|gb|ADE65944.1| hypothetical protein YPZ3_3035 [Yersinia pestis Z176003] Length = 364 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 57/361 (15%), Positives = 128/361 (35%), Gaps = 19/361 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFSQKLVRILGAAVDGEIPTNVVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ +++ G + +LI L LA+ S I+ + Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMNACGMGKKSLIMAALILALFTSGLAAINTIWLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + A+ + + L F +D +F+ R Sbjct: 122 PWSSKHQDVVLNDAKANPSLAALGGGQFKSSNDGNSALFIGNVAGKEFNRVFLAQLRPNG 181 Query: 183 T--HKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q +ILN G + + + +D I F Y Sbjct: 182 NQRPSVVVADSGHMSELPDGSQMVILNKGTRYEGTALLRDFRITDFVDYQAVIGHKQVQQ 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 A+ ++ L + R+EFH RLT + VI L+ Sbjct: 242 SSNGADQMSMKELWRSQEPDA----------RAEFHWRLTLIVSVVIMALL---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ ++ + ++ + F S + K N P+++++ + + L +I Sbjct: 289 VNPRQGRVLSMLPAMLLYLIFFLLQSSLRSKAG-NGQLDPLVWMWAVNGAYLALAIILNL 347 Query: 358 Y 358 + Sbjct: 348 W 348 >gi|167470530|ref|ZP_02335234.1| putative permease [Yersinia pestis FV-1] Length = 337 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 54/345 (15%), Positives = 122/345 (35%), Gaps = 19/345 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFSQKLVRILGAAVDGEIPTNVVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ +++ G + +LI L LA+ S I+ + Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMNACGMGKKSLIMAALILALFTSGLAAINTIWLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + A+ + + L F +D +F+ R Sbjct: 122 PWSSKHQDVVLNDAKANPSLAALGGGQFKSSNDGNSALFIGNVAGKEFNRVFLAQLRPNG 181 Query: 183 T--HKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q +ILN G + + + +D I F Y Sbjct: 182 NQRPSVVVADSGHMSELPDGSQMVILNKGTRYEGTALLRDFRITDFVDYQAVIGHKQVQQ 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 A+ ++ L + R+EFH RLT + VI L+ Sbjct: 242 SSNGADQMSMKELWRSQEPDA----------RAEFHWRLTLIVSVVIMALL---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 + ++ ++ + ++ + F S + K + P+++++ Sbjct: 289 VNPRQGRVLSMLPAMLLYLIFFLLQSSLRSKAGK-GQLDPLVWMW 332 >gi|257452883|ref|ZP_05618182.1| hypothetical protein F3_07439 [Fusobacterium sp. 3_1_5R] gi|317059425|ref|ZP_07923910.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R] gi|313685101|gb|EFS21936.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R] Length = 358 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 56/360 (15%), Positives = 129/360 (35%), Gaps = 6/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL+ ++S FI + I+ + + S+ + +I + +P + Sbjct: 1 MKIIDSYILKECRGPIILSVSIFTFIFLLDIIVAMMENIIVKGISVFDVARILSFYVPPI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + + R++E + +++ G ++KP+L L I F+ + Sbjct: 61 LTQTIPLGLFVGIMITFSKFTRSSEAIAMNSIGMDIRAILKPILTLGIASMFFILFLQES 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P+ ++ L++K L+E F + + I K + GI I ++ + Sbjct: 121 IIPRSYIKLQYLASKIAYENPVFQLKERTFMNNLEGYSLYIDKVGRDKHASGILIFENDE 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSSTI 238 I + D +IIL F+ ++ ++ ++ Sbjct: 181 KTIFPIVLVGHQAYWRD-SSIILERANFISFDEKGVRKLTGSFEDKRVELQAYFSDLQIK 239 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 V + ++ LL E Y+ E +++L V+ ++ ++ + Sbjct: 240 VKEIEMMSIGTLLR---EMKGKSKEEKLIYKVEINRKLALPFSSVMLSVLGVLLSIGHQR 296 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 +R I +++ + + + + L L + L ++KK+ Sbjct: 297 SGKRAGILVGILTIFFYICLLNVGIVLANVGKIPILLGVWLPNVLLAALTYRLYIVKKRR 356 >gi|257466752|ref|ZP_05631063.1| hypothetical protein FgonA2_04880 [Fusobacterium gonidiaformans ATCC 25563] gi|315917901|ref|ZP_07914141.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC 25563] gi|313691776|gb|EFS28611.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC 25563] Length = 358 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 56/360 (15%), Positives = 129/360 (35%), Gaps = 6/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL+ ++S FI + I+ + + S+ + +I + +P + Sbjct: 1 MKIIDSYILKECRGPIILSVSIFTFIFLLDIIVAMMENIIVKGISVFDIARILSFYVPPI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + + R++E + +++ G ++KP+L L I F+ + Sbjct: 61 LTQTIPLGLFVGIMITFSKFTRSSEAIAMNSIGMDIRAILKPILTLGIASMFFILFLQES 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P+ ++ L++K L+E F + + I K + GI I ++ + Sbjct: 121 IIPRSYIKLQYLASKIAYENPVFQLKERTFMNNLEGYSLYIDKVERDKHASGILIFENDE 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSSTI 238 I + D +IIL F+ ++ ++ ++ Sbjct: 181 KTIFPIVLVGHQAYWRD-SSIILERANFISFDEKGVRKLTGSFEDKRVELQAYFSDLQIK 239 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 V + ++ LL E Y+ E +++L V+ ++ ++ + Sbjct: 240 VKEIEMMSIGTLLR---EMKGKSKEEKLIYKVEINRKLALPFSSVMLSVLGVLLSIGHQR 296 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 +R I +++ + + + + L L + L ++KK+ Sbjct: 297 SGKRAGILVGILTIFFYICLLNVGIVLANVGKIPILLGVWLPNVLLAALTYRLYIVKKRR 356 >gi|313200017|ref|YP_004038675.1| permease [Methylovorus sp. MP688] gi|312439333|gb|ADQ83439.1| permease YjgP/YjgQ family protein [Methylovorus sp. MP688] Length = 355 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 51/348 (14%), Positives = 131/348 (37%), Gaps = 24/348 (6%) Query: 17 LMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNV 76 + + L + I ++ I + + + + + + + G+ + LPM+ + Sbjct: 5 IGAFLVLFGIVIAQRVAYYIGVAAKGSLASDAINTLLGFSMLKFLPMILSLTIFLAVLLT 64 Query: 77 LTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKA 136 LT +R++E+++ ++G I+PVL AI + + + + P + + + Sbjct: 65 LTRWHRDSEMVVWFSSGMGLAGWIRPVLTFAIPVVAVIAVLSLFVTPWATNKGSEFRDQL 124 Query: 137 QLALTFSYLEENLFFRLDD-DLYIKISKYNP-NNTLQGIFIVDSRDTQTHKIYYAQSGSI 194 + + + +F + D + ++ N ++ IF+ + + + +Q Sbjct: 125 KSRDELASISPGVFKESRNADRVFFVESFDELGNVVKNIFVQSVQHQRLGVVVASQGHRT 184 Query: 195 DLD--RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLL- 251 D +++ G + P + + S +F+ Y+++ E LL Sbjct: 185 VADNGDNFLVMEHGRRYEGKPNTAEFSTTEFERYSIRIEPNEVKEEPPGTAALGSVELLK 244 Query: 252 NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFIS 311 N NP N +E RL P+ L+ ++A + + + + ++ Sbjct: 245 NHNPANN-----------AELQWRLA---IPISAFLLVLLAIPLSFVDNRSGRSANMMLA 290 Query: 312 LSISFGVFWGFSYIIHKIEQNPYYIPILYLFL----FCISSIFLLMIK 355 L I ++ I+ P++ L+ F + +I++ + Sbjct: 291 LLIYI-IYNNMLSIVQAWLTQGKLNPVVGLWPVHVFFLLLTIWMFYRR 337 >gi|86131956|ref|ZP_01050553.1| predicted permease YjgP/YjgQ family [Dokdonia donghaensis MED134] gi|85817778|gb|EAQ38952.1| predicted permease YjgP/YjgQ family [Dokdonia donghaensis MED134] Length = 552 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 103/259 (39%), Gaps = 15/259 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI ++FL ++FI + + I ++ +++LK + +P++ Sbjct: 1 MKILDRYIFFTFVKTFLSIFTILMFIFVLQSVWLYIQELAGRDLDFDVILKFLLFAMPSL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V P + + + N E + +TG S +K V+F I L I F+ N Sbjct: 61 VTLVLPLSVLLTSIMTFGNFAENYEFAAMKSTGISLQRAMKSVIFFIIFLGIASFLFANY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKY--NPNNTLQGIFIVDS 178 + P + + L + F + DD +++++ + + L+ + I Sbjct: 121 VIPASQYEFRNLRNNIGKMKPAMLIRSGQFNEVGDDFNMRVAEKYGDRDQYLRDVVIHQK 180 Query: 179 RDT--QTHKIYYAQSG----SIDLDRQAIILNDGEVHRKSPISKD-------ISIMKFKS 225 + + A+ G SID ++ L +G + + K + F++ Sbjct: 181 EKGRLGNYTVIVAKEGELISSIDSPTLSLQLKEGNYYTEVQKKKTKEKLKEPFAKSYFET 240 Query: 226 YTLQTESANSSTIVLKAND 244 YTL + + + L A D Sbjct: 241 YTLNIDLSALDSEDLDARD 259 >gi|146283386|ref|YP_001173539.1| permease [Pseudomonas stutzeri A1501] gi|145571591|gb|ABP80697.1| predicted permease [Pseudomonas stutzeri A1501] Length = 373 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 56/357 (15%), Positives = 130/357 (36%), Gaps = 27/357 (7%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ R + + ++ I + ++ + + +LL I G+ +P L ++ Sbjct: 5 RYLSRELLVTMSAVSAVLLVIIMSGRFIKYLAQAAQGVLDPGVLLLIMGFRLPGFLQLIL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + + +E+ ++ TG S+ L+ + A L++ + + P+ Sbjct: 65 PLGLFLGILLAYGRLYLESEMTVLSATGMSQRRLLAYSMAPAALVAALVGWLSLGLAPQG 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPN-NTLQGIFIVDS---RD 180 + + ++ + F L F L + + + + L G+FI ++ R Sbjct: 125 IAEVDRILNQQDSLTEFDTLVPGRFQTLRGGSRVTYTRELSADRSELGGVFISETNVSRQ 184 Query: 181 TQTH---KIYYAQSGS--IDLDRQ-AIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 T + A+SG I D +IL +G + +P D +++ +Y + Sbjct: 185 TGKESGLSVLVAESGRQEIQPDGSRYLILENGYRYDGNPGQADYRAIQYDTYGVLLPKPE 244 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 S + + LL + +R+E H RL+ L + ++++ A Sbjct: 245 VSMELSEREAMPTRELLGSD----------NLRHRTELHWRLSLPLLVFVVTVLAVPLA- 293 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + RQ + + + L + + + + L L+ + +FL Sbjct: 294 -KVNPRQGRFLKLLPAIL--LYMTYLALLIAVRGALDKGRLP--MALGLWWVHGLFL 345 >gi|145300687|ref|YP_001143528.1| permease [Aeromonas salmonicida subsp. salmonicida A449] gi|142853459|gb|ABO91780.1| predicted permease [Aeromonas salmonicida subsp. salmonicida A449] Length = 370 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 55/346 (15%), Positives = 117/346 (33%), Gaps = 18/346 (5%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ R ++ L ++ I Q ++ I + ++ + + + ++ Sbjct: 7 RYLFRETLKTQLAVLFVLLLIFVSQQFIKIIGDAADGEVPTRLVSTLLLLNLSNMALLML 66 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + + +E+ ++ G S +++ + LA+L + + I P+ Sbjct: 67 PISLFLAILFAHGRLYAESEMTVLHAVGFSHRFVMRCAMVLALLTAAVAAFNTGWIAPQA 126 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPN-NTLQGIFIVDSR-DTQ 182 + Q+ + + S+L+ F LD L I + N + LQ IF++ D + Sbjct: 127 KEREYQVIDEFKADPGISFLQAGRFMELDKGRLVAYIQELNDKASLLQKIFVLQRSHDGK 186 Query: 183 THKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + A G + LD + L DG + ++ I +F Y+L Sbjct: 187 PPSVVVATEGVVTLDSNGLQWLTLKDGSRYEGHFSTRQFQISEFDEYSLVIRQQEMERSN 246 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 KA + LL N +E R++ L ++ + + A R Sbjct: 247 RKAAARPTVDLLGTQDN----------GMMAELQWRISLPLSILVLTFLVVPLA--RVNP 294 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC 345 RQ + + L + + P ++L Sbjct: 295 RQGRYAKLLPAILLYLSYFLLLSAARSAIDSGRLPHWPGMFLVPLV 340 >gi|165976525|ref|YP_001652118.1| permease [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|165876626|gb|ABY69674.1| predicted permease [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 334 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 47/326 (14%), Positives = 108/326 (33%), Gaps = 21/326 (6%) Query: 35 RINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGT 94 +N S +++L + G +P + + P + L +E+ ++ G Sbjct: 1 MLNSAVSGKVPTDLVLSLLGLGMPALAQFMLPLSLFVALLLTLGRFYAESEITVMRACGI 60 Query: 95 SRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLD 154 + L K FL+I + + + P + ++ A+A+ FS L F Sbjct: 61 GKSLLTKVAFFLSIFTTALAVYNVFWLTPWAINKQSEMLAEAKSNPRFSALSAGQFMT-A 119 Query: 155 DDLYIKISKYNPN-NTLQGIFIV--DSRDTQTHKIYYAQSGSID---LDRQAIILNDGEV 208 + I N N L I++ D + + A+SG + Q + L + Sbjct: 120 GGYVLFIENINNEQNKLNDIYVFQPDQQKKNRPSVVVAESGQLQGLPNGDQILTLENSTR 179 Query: 209 HRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETY 268 + + D I F SY + + + + L+ + Sbjct: 180 YEGTANVADFRISHFDSYQAYLGYQDVDSNEKLVQRADFNKLM----------ADQSNEA 229 Query: 269 RSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYI-IH 327 ++E R L L++++A ++ ++ + + ++ + F S + Sbjct: 230 KAELQWRFALIL---AVPLMALLAVPMSSVNPRQGRFAKVIPAVLLYLIYFLLQSSLKSS 286 Query: 328 KIEQNPYYIPILYLFLFCISSIFLLM 353 ++ L + ++M Sbjct: 287 GASGKLDATLLMPLVSIAFFILAMVM 312 >gi|226943298|ref|YP_002798371.1| YjgP/YjgQ family permease [Azotobacter vinelandii DJ] gi|226718225|gb|ACO77396.1| permease YjgP/YjgQ family [Azotobacter vinelandii DJ] Length = 376 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 60/358 (16%), Positives = 136/358 (37%), Gaps = 27/358 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + + ++ I + ++ + + +LL+I Y +P+ L Sbjct: 5 IIPRYLSRELLMTLGAVSAVLLAIIMSGRFIKYLAQAAQGLLDPGVLLQIMLYRVPSFLE 64 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + ++E+ ++ TG S L L AI ++ + + Sbjct: 65 LILPLGLFLGILLAYGRLYLDSEMTVLAATGMSPQRLAVYTLVPAIPVAALVAWMSLGLA 124 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNT-LQGIFIVD--- 177 P+ ++QL + + F L F + D + + T L +FI + Sbjct: 125 PQGIRLVEQLLNEQKALTEFDTLVPGRFQTMKDGSRVTYVEDLTDDRTELSRVFISEKQM 184 Query: 178 SRDTQTHK---IYYAQSGS--IDLDRQ-AIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 SRD + + A+ G + D +IL +G + +P D ++++ +Y + Sbjct: 185 SRDGGKERGIAVLVAEGGRQEVQADGSRYLILQNGYRYDGNPGEADYRVIRYDTYGVLLA 244 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S+ + + S L+ + +++E RL+ L +F + + Sbjct: 245 RPAVSSEINEREAIPTSELIGSDQP----------RHQAELQWRLSLPLL--VFVVAVLA 292 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 RA RQ + + + L + + + I + E + IP+L + L+ + + Sbjct: 293 VPLARANPRQGRFLKLLPAIL---LYMAYLATLIAVRGELDKGKIPML-IGLWWVHGV 346 >gi|296104924|ref|YP_003615070.1| permease YjgP/YjgQ family protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059383|gb|ADF64121.1| permease YjgP/YjgQ family protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 359 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 51/355 (14%), Positives = 126/355 (35%), Gaps = 19/355 (5%) Query: 9 LRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFC 68 +R +S L ++ I + ++++ + N++L + G IP + ++ P Sbjct: 1 MRETLKSQLAILFILLLIFFCQKLVKILGAAVDGEIPTNLVLSLLGLGIPEMAQLILPLS 60 Query: 69 FAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRST 128 + L + +E+ ++ G S+ L+K + LA+ I ++ P Sbjct: 61 LFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILALFTGIVAAVNVMWAGPMSSRH 120 Query: 129 IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT--HKI 186 ++ A+A+ + L + F + D + + + +F+ R + Sbjct: 121 QDEVLAEAKANPGMAALAQGQFQQATDGNSVLFIESVDGSKFNDVFLAQLRTKGNARPSV 180 Query: 187 YYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 A SG + Q + LN G + + +D I F++Y + Sbjct: 181 VVADSGQLAQRKDGSQVVTLNKGTRFEGTAMLRDFRITDFQNYQAIIGHQAVALDPTDTE 240 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 ++ L N + + R+EFH R+T +++++ + ++ Sbjct: 241 QMDMRTLWNTD----------TDRARAEFHWRIT---LVFTVFMMALIVVPLSVVNPRQG 287 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 ++ + ++ + F I P+++ + I L + + Sbjct: 288 RVLSMLPAMLLYLIYFL-LQTSIRSNGAKGKLDPMVWTWFVNSLYILLALGLNLW 341 >gi|317046771|ref|YP_004114419.1| permease YjgP/YjgQ family protein [Pantoea sp. At-9b] gi|316948388|gb|ADU67863.1| permease YjgP/YjgQ family protein [Pantoea sp. At-9b] Length = 396 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 55/354 (15%), Positives = 123/354 (34%), Gaps = 17/354 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 32 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGEIPTNLVLTLLGLGVPEMAQ 91 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G + L+K + L +L SI I+ + Sbjct: 92 LILPLSLFLAILMTLGRLYTESEITVMHACGLGKSVLVKSAMILMLLTSIVAAINVIWLG 151 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +++ A+ + L F D + + NT +F+ R Sbjct: 152 PWSSRYQDEVTQNAKANPGAAALAAGQFQTSSDGNAVLFVEDVRGNTFGNVFLAQLRPKG 211 Query: 183 T--HKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG ++ Q + L+ G + + +D I F Y + Sbjct: 212 NARPSVVLADSGHMEQRPDGSQIVTLDKGTRFEGTAMLRDFRITDFVDYKALIGYKQAVL 271 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 A ++ L N+P T+ +E + RLT +I L+ + Sbjct: 272 DPNDAEQADMRSLWQ--SNDP--------TFTAELNWRLTLVFSVLIMALMVVP--LSVV 319 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 RQ + + + L S + + +++ F ++ + Sbjct: 320 NPRQGRVLSMLPAMLLYLIFFLLQSSLKSNSAKGKFDPTLWMWVVNFAYLALAV 373 >gi|124267132|ref|YP_001021136.1| putative transmembrane protein [Methylibium petroleiphilum PM1] gi|124259907|gb|ABM94901.1| putative transmembrane protein [Methylibium petroleiphilum PM1] Length = 363 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 58/362 (16%), Positives = 135/362 (37%), Gaps = 19/362 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ + R + RSF + + I+ I + +++ + + + + + + GY+ LP Sbjct: 2 LFDSTLRRDLARSFGATLVVIMTIVITMFLIRTLGQAAGGSVAAQDVALLLGYVALENLP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + + LT M R++E++I +G + + PVL L L + + + + Sbjct: 62 TILSLSLFIAVVTTLTRMYRDSEMVIWFASGVGLLRFVPPVLRLTAPLLLLVALLALFVW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNTLQGIFIVDSRDT 181 P I +L + Q + + F D I + + V R Sbjct: 122 PWGNRQIAELKDRYQRRSDVARVAPGQFQSSADGKRTFFIERDTGEGNIARNVFVLERKP 181 Query: 182 QTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSY-TLQTESANSSTI 238 + + A++G I D D++ ++L G+ + + + + + +F SY L E+ +S Sbjct: 182 DSESVTSARTGRIEMDGDQRFVVLESGQRNDINLATGERKLAQFDSYRVLAGEAVSSGAD 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 L ++ LL N + E R+ + + L+ I Sbjct: 242 NLPPKARSTWDLLTQPSN----------RHFGELAWRIGLAVGGINLVLLGI--GLAGGN 289 Query: 299 VRQRKKIHPIFISLSISF---GVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 R+ + +F L+ + +++ + + +++ F ++ L + Sbjct: 290 PRRAGSWNLLFALLAFVVYFNLLNLSQAWVASGKLEIGIVLLLIHGGSFVLAVSLLWWRE 349 Query: 356 KK 357 + Sbjct: 350 RG 351 >gi|260062764|ref|YP_003195844.1| hypothetical protein RB2501_14279 [Robiginitalea biformata HTCC2501] gi|88784332|gb|EAR15502.1| hypothetical protein RB2501_14279 [Robiginitalea biformata HTCC2501] Length = 559 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 46/248 (18%), Positives = 89/248 (35%), Gaps = 15/248 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + YIL+ +F S + ++FI I I+ ++ + I+ K YL+P + Sbjct: 1 MRILDQYILKRFLTNFFSSFVILMFIFIFQTIWLFIDDLAGKGLDIIIIGKFLFYLMPNL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 V P + + + N E + +G S + P++ LL F N Sbjct: 61 TEKVLPLTVLLSSILTFGAFAENYEFAAMKASGISLQRSMLPLIVFVSLLGFVTFYFANT 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT--LQGIFIVDS 178 + P I L + + E +F + IK+ + N L+ + I + Sbjct: 121 VIPISEQKIYNLRRNIATLKPAAVITEGVFSD-FEGKNIKVDRKYGENDRFLENVVIHEK 179 Query: 179 RDTQTHKIYY-AQSGSIDLDRQ----AIILNDGE-VHRKSPISKD------ISIMKFKSY 226 + Q + A +G + ++L DG H + S + F +Y Sbjct: 180 SNLQRNTTVIKAATGELISGEGSDIIQLVLRDGHYYHEMTQASGSNQRTHPFAKADFDTY 239 Query: 227 TLQTESAN 234 + + Sbjct: 240 IMNIALPD 247 Score = 39.6 bits (91), Expect = 0.78, Method: Composition-based stats. Identities = 13/87 (14%), Positives = 35/87 (40%), Gaps = 6/87 (6%) Query: 272 FHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ 331 H + L +I V A A++R+ P+ +++ + F ++ F + + Sbjct: 445 LHNKFALALSCIILF---FVGAPLGAIIRKGGLGLPMVVAI-VLFLAYYFFGVFSNNYAK 500 Query: 332 NPYYIPIL--YLFLFCISSIFLLMIKK 356 P+L +L + + + + ++ Sbjct: 501 EGNIPPVLGAWLPTMIMLPLGVWLTRR 527 >gi|255012652|ref|ZP_05284778.1| hypothetical protein B2_02000 [Bacteroides sp. 2_1_7] Length = 641 Score = 136 bits (342), Expect = 7e-30, Method: Composition-based stats. Identities = 35/198 (17%), Positives = 83/198 (41%), Gaps = 2/198 (1%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 +L+ FLM+ +FI + + + I+ + + +L ++ Y ++PM P Sbjct: 1 MLQTFLPLFLMTFGICLFIVLMQFLWRYIDDMVGKGLGIPVLAEMFMYAALFLVPMALPL 60 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 + + ++ ELL + + G S I +++P++ + +S+ F +N + P + Sbjct: 61 AILLASLMTFGNLGERLELLAMKSAGVSLIHIMRPLIVTLLFVSVGAFFFQNNVMPVVQV 120 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDT-QTHK 185 + L + + E F++ + + K +P + L+ + I D + + Sbjct: 121 KLYTLLYSMRQKSPELDIPEGSFYKDIPGFNVYVKKKDPKDGLLKDVMIYDYSEGFNNAR 180 Query: 186 IYYAQSGSIDLDRQAIIL 203 + A SG + + L Sbjct: 181 VIVADSGRLKTSADKLFL 198 Score = 37.6 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 15/101 (14%), Positives = 40/101 (39%), Gaps = 7/101 (6%) Query: 257 NPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISF 316 + Y+ + + +E+HK+ T ++F I A A++R+ P+ IS+ + Sbjct: 368 DEAYK---VRRHLTEWHKKFTVSFACIMFFFIG---APLGAIIRKGGLGVPVVISVILFI 421 Query: 317 GVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIKK 356 + + + ++L ++ + + + K Sbjct: 422 FYYIIDNMGFKMARDGVWDAWEGMWLSSVVLTPMGIFLTYK 462 >gi|270265132|ref|ZP_06193395.1| permease YjgP/YjgQ family protein [Serratia odorifera 4Rx13] gi|270041066|gb|EFA14167.1| permease YjgP/YjgQ family protein [Serratia odorifera 4Rx13] Length = 364 Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 48/356 (13%), Positives = 130/356 (36%), Gaps = 19/356 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + +++ + N++L + +P + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFCQNLVKVLGDAVDGNVPTNLVLSLLALGVPKMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + ++E+ ++ G + TLI + LA++ S ++ Sbjct: 62 LILPLSLFLGLLMTLGRLYTDSEITVMHACGLGKRTLIIAAMVLALITSAVAAVNVFWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + ++A+ + + L E F D + +T +F+ R Sbjct: 122 PVASRYQDVVISEAKANPSIAGLAEGQFKPSQDGNAVLFIGNVKGSTFNDVFLAQLRPNG 181 Query: 183 T--HKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G I+ Q + L+ G + + +D I F Y + Sbjct: 182 NQRPSVVVAERGKINQLKDGSQVVTLDKGTRFEGTALLRDFRITDFNDYKAVVGHRAVAI 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +A ++ L + + R+EFH RLT + +++++ Sbjct: 242 DGNQAEQMSMQALWQSDDPDA----------RAEFHWRLT---LVLSVAIMALLVVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + ++ ++ + ++ + F + + + P+++L++ + + + Sbjct: 289 VNPRQGRVLSMLPAILLYLIFFLLQTSLRSNGGK-GKLDPMIWLWVVNAAYFAIAL 343 >gi|325278209|ref|ZP_08143702.1| permease YjgP/YjgQ family protein [Pseudomonas sp. TJI-51] gi|324096649|gb|EGB95002.1| permease YjgP/YjgQ family protein [Pseudomonas sp. TJI-51] Length = 371 Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 50/318 (15%), Positives = 114/318 (35%), Gaps = 23/318 (7%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ R + + ++ I + ++ + + +L I G+ +P L ++ Sbjct: 5 RYLSREVLVTLSAVSAVLLVIIMSGRFIKYLAQAAQGVLDPGVLFLIMGFRLPGFLQLIL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + + +E+ ++ TG S+ L+ + A L+++ + + P Sbjct: 65 PLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLLGMTMAPAALVALLVAWLSLSLAPLG 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNT-LQGIFIVDSR---- 179 + ++Q+ A+ F L F L D + + + L G+FI + R Sbjct: 125 VAQVQQIIAQQDTLTEFDTLVPGRFQMLRDGSRVTYTEQLSDDRVKLGGVFISEKRFNQD 184 Query: 180 --DTQTHKIYYAQSGS--IDLDRQ-AIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + + A+ G I D ++L +G + +P D +K+ +Y + Sbjct: 185 KTKDRAPSVLVAEKGHQEIQADGNRYLVLENGYRYDGNPGQADYRAIKYDTYGVLLPKPE 244 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + V + L + R+E RL+ + + L+++ Sbjct: 245 VAEEVTEREAIPTLDLF----------GKTDLRERAELQWRLSLPILVFVVTLLAVP--L 292 Query: 295 KRALVRQRKKIHPIFISL 312 R RQ + + + L Sbjct: 293 SRVNPRQGRFLKLLPAIL 310 >gi|304437499|ref|ZP_07397457.1| permease YjgP/YjgQ family protein [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369549|gb|EFM23216.1| permease YjgP/YjgQ family protein [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 376 Score = 135 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 50/373 (13%), Positives = 135/373 (36%), Gaps = 24/373 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPT 59 ++ + YI R + SFL + + + + ++ SL ++KI + +P Sbjct: 15 IRILDKYIFREVFLSFLFAICAFSAVFIGSGTLFRIAQYITDYGASLPSVIKIFVFSLPG 74 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 V+ P + + ++ ++E+ + + G + P + L L+S+ + Sbjct: 75 VVMWTFPMSMLLASLLTFGRLSSSSEITAMKSCGIGFGRIAAPAILLGFLVSVGAILFNE 134 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD----LYIKISKYNPN-NTLQGI- 173 + P+ + + + + +E++ + + + YN L G+ Sbjct: 135 HVVPRANTAYRNVIYYEIEGNSGMKSQEHVIIKEIEGGQIKRLVYARSYNAEQQQLTGVS 194 Query: 174 ---FIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT 230 F D + + YA+ I++ G+V+ + + M+F++ L Sbjct: 195 LQIFGADGKVSHVENAEYAE-----WTGSEWIMHKGDVYDIADEHLE-RRMRFETQVLPV 248 Query: 231 ESANSSTIVLK--ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 E I + + + L + + +E ++R++ + +IF LI Sbjct: 249 EKDPRQIIREQKSPEEMTMRELRHQ-IALMQTQYVNTSKLEAELYQRVSVPMASLIFTLI 307 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF-LFCIS 347 + + R F I +++ + + + P+L ++ + Sbjct: 308 GVPLGLQPT----RNSSSAGFAMSVIIIFIYYALMTMGNAFARGEVLPPMLAVWIPNIVG 363 Query: 348 SIFLLMIKKKYTK 360 I +++ ++ ++ Sbjct: 364 IIAGIILLRRASR 376 >gi|326335584|ref|ZP_08201771.1| YjgP/YjgQ family permease [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692350|gb|EGD34302.1| YjgP/YjgQ family permease [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 481 Score = 135 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 52/250 (20%), Positives = 104/250 (41%), Gaps = 14/250 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL +F+ S L I+ I I I+ ++ S+ I++K ++P + Sbjct: 1 MKILDRYILSRFIFNFVSSFLIIILIFIFQTIWLYIDELAGKGLSIFIIIKFVALMLPNL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P++ P + + L + + EL + +G S + + ++ +LLSI +F + N Sbjct: 61 IPLILPLTVVLSSIMTLGAFGESYELAAMKASGVSLLKGTRTLILFMLLLSIGVFFTFNN 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT--LQGIFIVDS 178 ++P L + + + +F + D IK+ K N L I I Sbjct: 121 LQPWSNRKAVALRDSIKNKQPSLAISQGIFNNVQD-FSIKVEKKTGENGEFLHDIVIHKL 179 Query: 179 R-DTQTHKIYYAQSGSIDLDRQA-----IILNDGEVHRKSPISKD-----ISIMKFKSYT 227 D + + A+ G + ++ +IL DG + + KF+ +T Sbjct: 180 GVDGLSRTVIKAKEGELSGHKKGSNVLQLILKDGTYYEDVKSANSDITFPFVKAKFQVHT 239 Query: 228 LQTESANSST 237 L + ++ +T Sbjct: 240 LNIDISSLNT 249 Score = 42.3 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 45/107 (42%), Gaps = 6/107 (5%) Query: 251 LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFI 310 L+ N +N Y+ +L+ YR F ++ + + VAA A++R+ P+ + Sbjct: 352 LDNNKDNVEYQQKLINIYRLTFSDKIALAITCFVLF---FVAAPLGAIIRKGGIGMPLVV 408 Query: 311 SLSISFGVFWGFSYIIHKIEQ---NPYYIPILYLFLFCISSIFLLMI 354 ++ + ++ + NPY P + F I+L ++ Sbjct: 409 AIGLFLTYYFSGLLTKNMATNGNINPYIAPWIPTFFLLPLGIYLTIL 455 >gi|260779401|ref|ZP_05888292.1| predicted permease [Vibrio coralliilyticus ATCC BAA-450] gi|260604491|gb|EEX30791.1| predicted permease [Vibrio coralliilyticus ATCC BAA-450] Length = 367 Score = 135 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 57/370 (15%), Positives = 132/370 (35%), Gaps = 26/370 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L + + ++++ + S ++++ +P++ Sbjct: 2 IIVRYLIRETLKSQLAIFFILFLVFLSQKLIKVLADASDGDIPASLVMHYVSLSMPSMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LA++ + + + Sbjct: 62 LMLPLSLFLGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLAVITGVIAAANAFVFS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RD 180 P + + QL + + + L++ F D + L+ +F+ RD Sbjct: 122 PMSQEKLIQLQEEVEAENSVDLLQKGQFQGTPDGSSVVFIDDIEGKQLKHVFVAQMRPRD 181 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + ++QSG + RQ I + DG + P D + F Y + Sbjct: 182 SILPSVSFSQSGEVKELSDGRQVIRMYDGTRYEGVPTRVDYMVTDFDQYEGLIGQRDVKP 241 Query: 238 IVLKANDQNLSFLL-NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 L+ NP+P ++E R++ V L++++ Sbjct: 242 KGRDWEAIPTMQLVSNPDP-----------RAQAELQWRIS---LVVCIPLLTMLVVPLS 287 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN--PYYIPI----LYLFLFCISSIF 350 A+ ++ + + ++ I F S +E P +I + L L I Sbjct: 288 AVNPRQGRFAKMGPAILIYLAYFLSISATKSALEDGSIPSFIGMWPINAALLLTAIGINS 347 Query: 351 LLMIKKKYTK 360 + I + K Sbjct: 348 MDSIPMRRFK 357 >gi|269121333|ref|YP_003309510.1| permease YjgP/YjgQ family protein [Sebaldella termitidis ATCC 33386] gi|268615211|gb|ACZ09579.1| permease YjgP/YjgQ family protein [Sebaldella termitidis ATCC 33386] Length = 364 Score = 135 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 57/367 (15%), Positives = 132/367 (35%), Gaps = 10/367 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI + + + FI + + + + ++ +++ YL+P V Sbjct: 1 MKIIDKYIYKALILPSVFGISIFTFILIINVFIDIMEKLFTNDLPFLLVIDYFIYLVPGV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + + + E++ I++ GTS + +P + ILL++ E Sbjct: 61 LTQTIPMGAFLGVMLTYGNFSETNEIIAIESAGTSLFRITRPAIIFGILLTVLGLFMEIE 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIKISKYNPNNTLQGIFIVDSR 179 + P+ + I + S E +F D + + + + F++ R Sbjct: 121 VNPRALNNINIEKRNLFSSKPSSLTEAKVFLSNSDAGFGFYVDEVDNSKAEASKFVLFQR 180 Query: 180 --DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + +++A+ + + +G K+ K ++ + + + T Sbjct: 181 TKEGEYPTVFFAEKAKFEAGYMLLKNVEGFNFDKTGDRKVVARYEEQYLPMSTFFKQEDI 240 Query: 238 IVLKANDQNLSFLLNPNPNN--PNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 ++ NL L + E Y ++++R+ V L+ + Sbjct: 241 EKKSRSEMNLRELREAYKQSIAEGESYEDSVKYMIKYNERIIGPFASV---LLCWLGVLL 297 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-PYYIPILYLFLFCISSIFL-LM 353 ++ K ISL + F SY +++N +++ F + + L L Sbjct: 298 AVSNKRSGKGISFGISLIVIFAYIGLASYAKIVVQKNHIDPNIAMWMPNFILLVLCLVLS 357 Query: 354 IKKKYTK 360 IKK ++ Sbjct: 358 IKKSRSR 364 >gi|262370181|ref|ZP_06063508.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] gi|262315220|gb|EEY96260.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] Length = 366 Score = 135 bits (341), Expect = 9e-30, Method: Composition-based stats. Identities = 57/362 (15%), Positives = 130/362 (35%), Gaps = 19/362 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + + L+ + I ++++ + + IL I GY +P L Sbjct: 2 IIRRYLVKQVVSTSLVVIALLTLIMMGGRLIKYFGVAAQGRLDAGILFSIIGYRLPEFLT 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + V + + E+ +++ +G SR L + ++ + ++ + + Sbjct: 62 LILPLGFFIGLMLVFGRLYVDHEMAVLNGSGVSRNQLGRLLIPMTVVFLAVQAVLMLWMA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSRDT 181 P +QL+ + F + F I + + L+ IF + Sbjct: 122 PWGVRQFEQLTTSQAVRTGFDLVRPKEFISSGP-YTIYAGDLSEDRKNLKDIFFYQRAEA 180 Query: 182 QT--HKIYYAQSGS---IDLDRQAII-LNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + + A+ + I+ D ++ L G + P S +F+SY L+ E+ Sbjct: 181 EGKPDVMILAKEATRVEIENDPANVVDLVQGRRYEIYPGQPRYSQAEFQSYRLRLENDKE 240 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + + + L N N+P SE R+ P + ++A Sbjct: 241 AKFESADVEALSTMKLWDNRNDPVVA--------SELGWRI---FVPFAIVVALLLAVAL 289 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + ++ + +F +L I + I ++ + I L L + L + Sbjct: 290 SEVSPRQGRYLKLFPALLIFASLIVALMAIKTRVSKEEVGIGAYPLILVIYAIAAALFSR 349 Query: 356 KK 357 K+ Sbjct: 350 KQ 351 >gi|87302818|ref|ZP_01085629.1| possible permease [Synechococcus sp. WH 5701] gi|87282701|gb|EAQ74659.1| possible permease [Synechococcus sp. WH 5701] Length = 401 Score = 135 bits (341), Expect = 9e-30, Method: Composition-based stats. Identities = 56/359 (15%), Positives = 124/359 (34%), Gaps = 24/359 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + ++ + L ++ V + + + V+ S L L++ G +P L Sbjct: 29 LMDRWLTNELMGPLLFGVAAFTAVSLSVGVVFELVRRVAESGLPLLTALQVLGLRMPGFL 88 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P M T ++++ N+EL+ + + G S ++ P L +A+L+S+ F+ ++I Sbjct: 89 VLSFPMATLMATLLAYSTLSSNSELIALRSVGVSTWRMVLPALIVAVLMSLLTFVFNDLI 148 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEEN----LFFRLDDDL-----------YIKISKYNP 166 P +A + N F R L ++ Sbjct: 149 VPSANLEATNTLNQALGKAIAAEKGSNIIYSRFSRRPSKLDESGSERYLSQLFYSRQF-K 207 Query: 167 NNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKS- 225 + ++ + ++D +I A++G+ + + DG++ S KF Sbjct: 208 DGEMEEVTVLDFSRPSGTQILKAKTGTWNDEAGMWEFRDGQIVLVGDSETTTS-AKFDRY 266 Query: 226 -YTLQTESANSSTIVLKANDQNLSF-LLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPV 283 Y L + + A ++S L + R ++ + Sbjct: 267 LYPLDQGPLKLAALPKDAASMSVSEALRAETLLREAGDQKEARRLRVRIQEKFAFPAICL 326 Query: 284 IFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 +FGLI + + + IS+ + F + S+I + P+L + Sbjct: 327 VFGLIGSSLGVRPNA--RTSRSQGFGISVLLIFSYYLM-SFIFSSLGVKGTLGPVLAAW 382 >gi|146313281|ref|YP_001178355.1| permease YjgP/YjgQ family protein [Enterobacter sp. 638] gi|145320157|gb|ABP62304.1| permease YjgP/YjgQ family protein [Enterobacter sp. 638] Length = 366 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 54/360 (15%), Positives = 132/360 (36%), Gaps = 25/360 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGEIPTNLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ I ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMVLALFTGIVAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + D + + + +F+ R Sbjct: 122 PWSSKHQDEVLAEAKANPGMAALAQGQFQQASDGSSVLFIESVDGSRFNDVFLAQIRTKG 181 Query: 183 T--HKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F++Y N + Sbjct: 182 NARPSVVVADSGQLAQRKDGSQVVTLNKGTRFEGTALLRDFRITDFQNYQAVVGHQNVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 ++ L+N + N R+E H RLT +++++ Sbjct: 242 DPTDTEQMDMRTLINTDTN----------RARAELHWRLT---LVFTVFMMALMVVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-------PYYIPILYLFLFCISSIF 350 + ++ ++ + ++ + F + I + + + LYL L + +++ Sbjct: 289 VNPRQGRVLSMLPAMLLYLVYFLLQTSIKSNGGKGKIDPMIWTWAVNGLYLLLAVVLNMW 348 >gi|121611822|ref|YP_999629.1| permease [Verminephrobacter eiseniae EF01-2] gi|121556462|gb|ABM60611.1| permease YjgP/YjgQ family protein [Verminephrobacter eiseniae EF01-2] Length = 372 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 58/338 (17%), Positives = 133/338 (39%), Gaps = 27/338 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ I + + RSF + + +V + + +++ + + + S + ++ + G+ + LP Sbjct: 2 LFDSSIRKELARSFGATLVVLVTVVMTMMLIRTLGQAARGSVSPSDVMLVMGFTVVGQLP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + + L+ M R++E++I +G +L++P+L A + + + + ++ Sbjct: 62 TIASLSLFIAVVGTLSRMYRDSEMVIWFASGRGLASLVRPLLRFAWPVMLVIAVLSLLVW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNP--------NNTLQGI 173 P + I+QL + + + F + I K NP T I Sbjct: 122 PWANAQIQQLKTRYEQRSDIDRIAPGEFQESSNGNRVFFIDKGNPAPLAGNDAAQTGSNI 181 Query: 174 FIVDSRDTQTHKIYYAQSGS--IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT- 230 FI + D + + A+S + ++ +L+DG+ S + I +F Y + Sbjct: 182 FIA-ASDGRQESVTSARSARLQLQDGQRMAVLSDGQRLETSHDRPGLKISEFSEYVMHIG 240 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 + + L + LL + L YR+E RL L + F L+ + Sbjct: 241 SAPPGAAEDLAVKTRATHELL----------LKSLPAYRAELGWRLGLVLAALNFVLLGL 290 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHK 328 ++ + + + +L +F V++ + Sbjct: 291 AV---TSVNPRAARSTSMLFAL-FAFIVYYNLMTLGQS 324 >gi|284929475|ref|YP_003421997.1| putative permease [cyanobacterium UCYN-A] gi|284809919|gb|ADB95616.1| predicted permease [cyanobacterium UCYN-A] Length = 382 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 41/345 (11%), Positives = 113/345 (32%), Gaps = 21/345 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPT 59 + + Y+ + FL + + + + V+ S L + +I IP Sbjct: 8 LSVVDRYLFLELLSPFLFGMGIFTSLGLSIGTLFDLVRRVTESGLVLTVAFQILLLKIPG 67 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 L + P + + ++ ++E++ + + G L+ PV+ +++ F+ + Sbjct: 68 FLSLAFPMAILLAALMAYSRLSSDSEIIALRSLGVGIYRLVIPVVIFGFIVTGCAFVVND 127 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-------------YIKISKYNP 166 I P + +A + N+ + + +YN Sbjct: 128 WIAPAATHKAAIILEEAVSQKRPDFKRHNIVYPEYKTVKGKNGQESTMLTRLFHAEEYN- 186 Query: 167 NNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKS- 225 ++G+ I+D ++I ++S + ++ +G ++ +P +I++F+ Sbjct: 187 GEEMKGLTILDRTQEGVNQIVTSESATWNISSNTWDFFNGTIYLIAPDGSYRNIVRFQHQ 246 Query: 226 -YTLQTESANSSTIVLKANDQNLSFLLNPNPN-NPNYRPELLETYRSEFHKRLTQWLFPV 283 L + + + +S + + + + ++ + Sbjct: 247 QLALPRAPLDLADRRQNFTEMTISETREYLKAVQFSGNEKRIRKVKVRLQEKYAMPFVCL 306 Query: 284 IFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHK 328 IFGL+ K + + + + FG + Sbjct: 307 IFGLVGASIGVKPQNT---NRATSFGVCVGLIFGYYILAFMSTSL 348 >gi|83746689|ref|ZP_00943738.1| Hypothetical membrane spanning protein [Ralstonia solanacearum UW551] gi|207721411|ref|YP_002251852.1| permease protein [Ralstonia solanacearum MolK2] gi|207742608|ref|YP_002259000.1| permease protein [Ralstonia solanacearum IPO1609] gi|83726642|gb|EAP73771.1| Hypothetical membrane spanning protein [Ralstonia solanacearum UW551] gi|206586570|emb|CAQ17157.1| permease protein [Ralstonia solanacearum MolK2] gi|206594002|emb|CAQ60929.1| permease protein [Ralstonia solanacearum IPO1609] Length = 387 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 62/359 (17%), Positives = 125/359 (34%), Gaps = 21/359 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + L ++ +++ + + ++ S N +L + G L Sbjct: 17 IFEQALRRELSFTAGAVFLVLLTFMLTTLVIRILGMAANGEASPNDVLLLIGLATLGYLA 76 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT +++E+++ G S I+PVL ++ + + + Sbjct: 77 ILLCATLFISVLLVLTRWYKDSEMVVWFTAGLSLTDFIRPVLRFSLPFVVLVALLALFGW 136 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYNPN-NTLQGIFIVDSRD 180 P + + S + F Y+ I + + +F+ ++ + Sbjct: 137 PWANQQSALFRDRFEQRDVLSMISAGRFIEPAHGNYVLFIEGVDAGMKHARNLFVANA-E 195 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANSS 236 + A++G + ++L+ G + +P D I++F Y ++ S Sbjct: 196 ADKIGVALAKTGEFKTMPNGDRYVLLDKGRRYEGTPGQLDYRIVEFDRYGVKVASKPPQV 255 Query: 237 TIVLKANDQNLSFLL-NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA-D 294 L + + LL NP P N E R+ L + F LI++ A Sbjct: 256 DANLPTKSRPTTELLSNPTPENLG-----------ELVWRIGLPLLALNFVLIAVPLAYV 304 Query: 295 KRALVRQRKKIHPIFISLSIS-FGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 L R I + I L+ S KI + PI L C +F Sbjct: 305 NPRLGRYTPMIFAVLIYLTYSNLLNLSQAWVAQGKINAMLAWWPIHLLAFICAVLLFRF 363 >gi|319788014|ref|YP_004147489.1| permease YjgP/YjgQ family protein [Pseudoxanthomonas suwonensis 11-1] gi|317466526|gb|ADV28258.1| permease YjgP/YjgQ family protein [Pseudoxanthomonas suwonensis 11-1] Length = 361 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 64/367 (17%), Positives = 143/367 (38%), Gaps = 21/367 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+LR +SFL + + ++ ++ ++ + ++ +LL G + Sbjct: 1 MPKLDRYLLRDFVQSFLATLIVLLTVSLGGVLVDVLGEIADGGLPARLLLSQLGLQLLVY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP+V P + + + R++E+ +++ G L++P+L + + + + + Sbjct: 61 LPLVLPLALMLGLMLAVARLYRDSEMAVLNAVGVGPKRLLRPLLMAVVPVVVAVGMCSLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFR-LDDDLYIKISKYNPNN-TLQGIFIVDS 178 + P + T + +A +L + LE F + + I + + TLQG+F+ Sbjct: 121 LGPWAQRTAANMIEQANRSLIVAGLEPGRFTSLPNGGGIVYIDGMSEDGRTLQGVFLQRE 180 Query: 179 RDTQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISK-DISIMKFKSYTLQTESAN 234 RD + + A++GS++ + L DG D +M++ + Sbjct: 181 RDGRVD-VVTARTGSLEFGGDRDRFLRLADGRRLEGPLEQGLDFRLMRYAVNEVALPDRA 239 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 L N + +E H RLT L + F L+++ A Sbjct: 240 EERADDDPAIAPTLSLFN----------DGRPAAIAELHGRLTPPLMALAFALLTVPLA- 288 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIE-QNPYYIPILYL-FLFCISSIFLL 352 R+ RQ++ + L+ G+ F + + + P + + +L +I+L Sbjct: 289 -RSSPRQQRYGRLMLGFLAYLVGLNLMFIGVRMLADGKLPAPVGLWWLTLPLMALAIWLY 347 Query: 353 MIKKKYT 359 + + Sbjct: 348 LRDGRLP 354 >gi|261855831|ref|YP_003263114.1| permease YjgP/YjgQ family protein [Halothiobacillus neapolitanus c2] gi|261836300|gb|ACX96067.1| permease YjgP/YjgQ family protein [Halothiobacillus neapolitanus c2] Length = 371 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 57/343 (16%), Positives = 127/343 (37%), Gaps = 21/343 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+LR + L L ++ I + + ++ + + +++ + G+ + Sbjct: 1 MPILNRYLLREASVATLGVTLIVMLIMLANLLARSLSAAAEGSLPSSLIPAMMGFNAVKL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V P + L M+R++EL ++ G L + +L+LAI +S+ Sbjct: 61 LIYVLPVGLFIGLMFALGRMSRDSELTVLRACGYGPRHLSQAILWLAIPVSLLTASISLF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNNTLQGIFIVDSR 179 P + ++ A+ F+ L F + I + N IF + Sbjct: 121 AYPALQQVQSRMIDSARSQQVFNQLPVGRFIEEPSGKAVLYIGSKSGNG-YSDIFAFNEP 179 Query: 180 DT-----QTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 Q + A G + D ++L G + +D S++ ++++ + Sbjct: 180 TNTKNARQKPGVEMAPFGKLMTDSAGHRYVVLEQGRRIQGVAGEQDWSVIDYQTHEILVP 239 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 + + +L L + P + ++EF+ RL+Q L ++ LI++ Sbjct: 240 GRADTENTQENKKSSLQLLHSNLPGD-----------QAEFYYRLSQALTVLVLALIAVP 288 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY 334 A + + ++ F+ ++ F + I E N + Sbjct: 289 LAQAKPRSGRYGRLFWAFLLYALYFNLIALTENAIKHGELNLW 331 >gi|87124323|ref|ZP_01080172.1| possible permease [Synechococcus sp. RS9917] gi|86167895|gb|EAQ69153.1| possible permease [Synechococcus sp. RS9917] Length = 388 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 56/373 (15%), Positives = 131/373 (35%), Gaps = 19/373 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + ++L + L + ++ V + + + + S + I +++ +P+ L Sbjct: 18 LLDRWLLGELIGPLLFAIAAFTVVSLSVGVMFELVRRIVESGLPVGIAVQVLLLRLPSFL 77 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P M T + ++ N+EL + + G S +I P L LA++++ F+ ++I Sbjct: 78 VISFPMATLMATLLAYSRLSANSELTALRSVGISATRMIAPALALALVMTGLTFVFNDVI 137 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLY-------------IKISKYNPNN 168 P+ + + +A + N+ + L K+N Sbjct: 138 VPRTSLSAEITLQRALGRSVSTEKGNNIIYSRFGRLVAGDGESETGLAQLFYAKKFN-EG 196 Query: 169 TLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 + G+ ++D ++ A + DG++ SP S ++ F Y Sbjct: 197 VMSGVTVLDFSRLGFTQMLVADEARWNERESKWEFLDGQILTLSP-SGSVTSADFDRYLY 255 Query: 229 QTESAN--SSTIVLKANDQNLSFLLNPNPN-NPNYRPELLETYRSEFHKRLTQWLFPVIF 285 +A + + AN+ ++ + + + R ++ T + ++F Sbjct: 256 PLSAAPIRIAKLPKDANNMTVAEAIEAERMLDEAGDRKEARRMRVRIQEKFTLPMACLVF 315 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC 345 GLI K R + I + L + + V + P + L Sbjct: 316 GLIGSSLGAKPNGRTSRSQGFGISVVLILVYYVLSFSFSSLGVKGTLPPVVAAWAPVLIS 375 Query: 346 ISSIFLLMIKKKY 358 ++ LL+ + Sbjct: 376 LAGGGLLLRQASR 388 >gi|238927586|ref|ZP_04659346.1| permease YjgP/YjgQ family protein [Selenomonas flueggei ATCC 43531] gi|238884511|gb|EEQ48149.1| permease YjgP/YjgQ family protein [Selenomonas flueggei ATCC 43531] Length = 379 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 50/361 (13%), Positives = 129/361 (35%), Gaps = 21/361 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPT 59 ++ + YI R + SFL + + + + ++ SL ++KI + +P Sbjct: 18 IRILDKYIFREVFLSFLFAICAFSAVFIGSGTLFRIAQYITDYGASLPSVIKIFVFSLPG 77 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 V+ P + + ++ ++E+ + + G + P + L ++S+ + Sbjct: 78 VVMWTFPMSMLLASLLTFGRLSSSSEITAMKSCGIGFGRIAAPAILLGFVVSVGAVLFNE 137 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD----LYIKISKYNPNNT-LQGI- 173 + P+ + + + + +E++ + + + Y+ L G+ Sbjct: 138 HVVPRANTAYRNVIYYEIEGNSGMKSQEHVIIKEIEGGQIKRLVYARSYDAEQQHLTGVS 197 Query: 174 ---FIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT 230 F D + + YA+ I++ G+V+ + + M F++ L Sbjct: 198 LQIFGADGKVSHVENAEYAE-----WTGSEWIMHQGDVYDIADEHLE-RRMHFETQVLPV 251 Query: 231 E-SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 E + KA ++ L + +E ++R++ + +IF LI Sbjct: 252 EKNPRQIIREQKAPEEMTMRELRHQITLMQTQYVNTNKLEAELYQRVSVPMASLIFTLIG 311 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 + + R F I +++ + + + + P+ +++ I I Sbjct: 312 VPLGLQPT----RNSSSAGFAMSVIIIFIYYALMTMGNALARGGVLPPMFAVWIPNIVGI 367 Query: 350 F 350 F Sbjct: 368 F 368 >gi|304413752|ref|ZP_07395196.1| inner membrane component LptF of LptABCFG lipopolysaccharide transporter [Candidatus Regiella insecticola LSR1] gi|304283843|gb|EFL92237.1| inner membrane component LptF of LptABCFG lipopolysaccharide transporter [Candidatus Regiella insecticola LSR1] Length = 367 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 59/364 (16%), Positives = 132/364 (36%), Gaps = 19/364 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 YI++ +S + ++ I +++ ++ + +++L G +P + Sbjct: 2 IITKYIIKKTFKSQMAILFILLLIFISQKLIAILSETVNGEIPTHLILSFLGLGLPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + M+ E+ ++ G S+ +LI L LA+ + I+ Sbjct: 62 LVLPLSLFLGLLITYGKMHTEREITVMHACGFSQNSLILVALILAMGTAALAAINTLWFM 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + ++ + T + L E F D + IF+ + Sbjct: 122 PWSVTYQGKILNDFRANPTLAALIEGQFQSSMDGKTVLFVGAVDGKKFDHIFLAQLQPDG 181 Query: 183 --THKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 I A++G I Q + L+ G + + + +D I FK+Y + + + Sbjct: 182 SRRPSIVIAENGYIAERPDGSQIVTLDKGTRYEGTALLRDFRITDFKNYQVTINPQSITQ 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L + + + RSEFH RLT +I L+++ Sbjct: 242 NTNTSEQMSIRSLWHSSHPDA----------RSEFHWRLTLITSVIIMALLAVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 RQ + ++ + L S + P+L+L++ + + L ++ K Sbjct: 290 NPRQSRTLNMLPAILLYLIFFLLQSSLRSSTAQGKLD--PLLWLWMVNGAYLALAIVLNK 347 Query: 358 YTKI 361 + + Sbjct: 348 WDSL 351 >gi|327481779|gb|AEA85089.1| permease [Pseudomonas stutzeri DSM 4166] Length = 373 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 57/357 (15%), Positives = 130/357 (36%), Gaps = 27/357 (7%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ R + + ++ I + ++ + + +LL I G+ +P L ++ Sbjct: 5 RYLSRELLITMSAVSAVLLVIIMSGRFIKYLAQAAQGVLDPGVLLLIMGFRLPGFLQLIL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + + +E+ ++ TG S+ L+ L A L++ + + P+ Sbjct: 65 PLGLFLGILLAYGRLYLESEMTVLSATGMSQRRLLAYSLAPAALVAALVGWLSLGLAPQG 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPN-NTLQGIFIVDS---RD 180 + + ++ + F L F L + + + + L G+FI ++ R Sbjct: 125 IAEVDRILNQQDSLTEFDTLVPGRFQTLRGGSRVTYTRELSADRSELGGVFISETNVSRQ 184 Query: 181 TQTH---KIYYAQSGS--IDLDRQ-AIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 T + A+SG I D +IL +G + +P D +++ +Y + Sbjct: 185 TGKESGLSVLVAESGRQEIQPDGSRYLILENGYRYDGNPGQADYRAIQYDTYGVLLPKPE 244 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 S + + LL + +R+E H RL+ L + ++++ A Sbjct: 245 VSMELSEREAMPTRELLGSD----------NLRHRTELHWRLSLPLLVFVVTVLAVPLA- 293 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + RQ + + + L + + + + L L+ + +FL Sbjct: 294 -KVNPRQGRFLKLLPAIL--LYMTYLALLIAVRGALDKGRLP--MALGLWWVHGLFL 345 >gi|297517382|ref|ZP_06935768.1| hypothetical protein EcolOP_07050 [Escherichia coli OP50] Length = 340 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 67/354 (18%), Positives = 130/354 (36%), Gaps = 32/354 (9%) Query: 17 LMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNV 76 ++ F++FI + + ++ T +L+++L I Y + L M+ P + Sbjct: 1 MIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIALEMLLPVGLYVSVGVT 60 Query: 77 LTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKA 136 L M ++E+ I G S L K VL+LAI LSIF+ + P + I QL ++ Sbjct: 61 LGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMYGRPWAYAQIYQLEQQS 120 Query: 137 QLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSRDTQTHKIYYAQSGSID 195 Q L L F D+ I + +N L I + +I+ A+S + Sbjct: 121 QSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIY-TSTANRTRIFRARSVDVV 179 Query: 196 LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNP 255 SP + + +Y + + + + + +NL LNP Sbjct: 180 D--------------PSPEKPTVMLHNGTAYLIDHQGRDDNEQIY----RNLQLHLNPLD 221 Query: 256 NNPNYRPELLE----------TYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKI 305 +PN + + +E R ++ L + + + R RQ + Sbjct: 222 QSPNVKRKAKSVTELARSVFPADHAELQWRQSRGLT--ALLMALLAISLSRVKPRQGRFS 279 Query: 306 HPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYT 359 + ++L + G IP L+L + L+++ + ++ Sbjct: 280 TLLPLTLLFIAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMGLLMLVARDFS 333 >gi|218665831|ref|YP_002426599.1| YjgP/YjgQ family protein [Acidithiobacillus ferrooxidans ATCC 23270] gi|218518044|gb|ACK78630.1| YjgP/YjgQ family protein [Acidithiobacillus ferrooxidans ATCC 23270] Length = 373 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 54/241 (22%), Positives = 106/241 (43%), Gaps = 6/241 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + ++R + SFL++ L ++ I + Q+ Q + V+S L+I+L++ G +PT+ Sbjct: 1 MTRIRMQVVRNLTISFLLTSLVVLAILAIGQLTQLLRQVASGQLPLSIILRLLGLALPTL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L MV P F V +++ R+ E++ I +TGT L+ PV +A + I Sbjct: 61 LVMVLPLAFFFAVYLVFSNLYRSNEMVAIRSTGTGLSGLLPPVAVVAACVFCLELILSLS 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN--TLQGIFIVDS 178 P + ++ S + A + L+ F L I + + N Q IF+ + Sbjct: 121 WAPGAQRELQSESVRLANAAAEAMLQPGSFTNLPGGRVIYVGQAVGKNSHRFQEIFLSVA 180 Query: 179 RDTQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + Q A G + + ++L DG+ + P ++ F Y + ++ ++ Sbjct: 181 QGGQLDMA-TAAYGEVKPAQDGALTLVLVDGQRYLGQPGKAGFKVLSFARYRVLLDNQDT 239 Query: 236 S 236 Sbjct: 240 G 240 >gi|265765250|ref|ZP_06093525.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|263254634|gb|EEZ26068.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] Length = 636 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 43/266 (16%), Positives = 105/266 (39%), Gaps = 22/266 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K +++I++ F+ + +FI + + + ++ + +++L + Y ++ Sbjct: 4 IKRLDIFIIKSFLLLFVGTFFICLFIFMMQFLWKYVDELVGKGLEMSVLAQFFFYSALSL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +PM P + + + ELL + G S + +++P++ L + F +N+ Sbjct: 64 VPMSLPLAVLLASLITFGNFGERFELLAMKAAGISLLKIMRPLIVLVFAICCVSFYFQNV 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 I P+ ++ + L + + E +F+ D +K+ + + L + I D Sbjct: 124 IGPQAQAKLGTLLISMKQKSPEVDIPEGVFYDEIDGYNLKVQRKDRKTGMLYDVIIYDFS 183 Query: 180 DT-QTHKIYYAQSGSIDLDRQ----AIILNDGEV---------------HRKSPISKDIS 219 + +I A SG +++ + L GE+ +R+ + S Sbjct: 184 NNFDNARIIVADSGRLEMTADKQHLYLHLYSGEMFENLKAQSMSSKNVPYRRESFREKHS 243 Query: 220 IMKFKSYTLQTESANSSTIVLKANDQ 245 I++F S A+ + D Sbjct: 244 IIQFDS-DFNMADASIMSNQSTTKDM 268 >gi|161505034|ref|YP_001572145.1| hypothetical protein SARI_03165 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160866381|gb|ABX23004.1| hypothetical protein SARI_03165 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 366 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 54/364 (14%), Positives = 132/364 (36%), Gaps = 25/364 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ I ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMVLALFTGILAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + + + + + +F+ R Sbjct: 122 PWSSKHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFHDVFLAQIRPKG 181 Query: 183 T--HKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F++Y + Sbjct: 182 NARPSVVVADSGHLTQLRDGSQVVTLNKGTRFEGTALLRDFRITDFQNYQAIIGHQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L N + + R+E H R+T + L+ + Sbjct: 242 DPNDTDQMDMRTLWNTDSD----------RARAELHWRITLVFTVFMMALMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFLFCISSIFLLMI 354 RQ + +S+ + ++ F I I+ N P+++++ + + L + Sbjct: 290 NPRQGR-----VLSMLPAMLLYLLFFLIQTSIKSNGGKGKLDPVIWMWTVNLIYLALAIG 344 Query: 355 KKKY 358 + Sbjct: 345 LNLW 348 >gi|253564060|ref|ZP_04841517.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|251947836|gb|EES88118.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|301161640|emb|CBW21180.1| putative permease [Bacteroides fragilis 638R] Length = 636 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 43/266 (16%), Positives = 105/266 (39%), Gaps = 22/266 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K +++I++ F+ + +FI + + + ++ + +++L + Y ++ Sbjct: 4 IKRLDIFIIKSFLLLFVGTFFICLFIFMMQFLWKYVDELVGKGLEMSVLAQFFFYSALSL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +PM P + + + ELL + G S + +++P++ L + F +N+ Sbjct: 64 VPMSLPLAVLLASLITFGNFGERFELLAMKAAGISLLKIMRPLIVLVFAICCVSFYFQNV 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 I P+ ++ + L + + E +F+ D +K+ + + L + I D Sbjct: 124 IGPQAQAKLGTLLISMKQKSPEVDIPEGVFYDEIDGYNLKVQRKDRKTGMLYDVIIYDFS 183 Query: 180 DT-QTHKIYYAQSGSIDLDRQ----AIILNDGEV---------------HRKSPISKDIS 219 + +I A SG +++ + L GE+ +R+ + S Sbjct: 184 NNFDNARIIVADSGRLEMTADKQHLYLHLYSGEMFENLKAQSMSSKNVPYRRESFREKHS 243 Query: 220 IMKFKSYTLQTESANSSTIVLKANDQ 245 I++F S A+ + D Sbjct: 244 IIQFDS-DFNMADASIMSNQSTTKDM 268 >gi|71908694|ref|YP_286281.1| permease YjgP/YjgQ [Dechloromonas aromatica RCB] gi|71848315|gb|AAZ47811.1| permease YjgP/YjgQ [Dechloromonas aromatica RCB] Length = 360 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 41/343 (11%), Positives = 115/343 (33%), Gaps = 18/343 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE R ++ + ++ I +++ + + + + + G+ +P Sbjct: 2 IFERAARREFAQAAAGISVALLAILTSTNLIRLLKEAAGGRIAPEAVASLLGFSALNFMP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + L+ + R++E+++ ++G + PVL A + I + + + Sbjct: 62 VLLSLTLFVSVLLSLSRVYRDSEMVVWFSSGLPLTGWVSPVLRFAAPIVIAIAVVSGFLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNT-LQGIFIVDSRD 180 P S+ + K S + F + + + + + +F+ ++ Sbjct: 122 PWANSSSAEYREKLSARSELSQVSPGAFREVKKGQRVFFVEGVEGDGSHVGNVFVASYQE 181 Query: 181 TQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + + SG + ++L G + P + +M+F+ Y + E S Sbjct: 182 GKLG-VIMSDSGYQEASGNGDRFVVLEHGRRYEVEPGTPAFKVMEFERYRARVEDGEPSP 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L+ + N R E R+ + ++ L++I Sbjct: 241 SDVSPKGMPITRLVLEDSNPA----------RGELLWRVGLPVSALVLCLLAIP--LSYV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY 340 R + + + L + + + L+ Sbjct: 289 NPRAGRSANMLIAILVYAIYNNLLSVSQAWVAQGKMSFWVGLW 331 >gi|300772186|ref|ZP_07082056.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC 33861] gi|300760489|gb|EFK57315.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC 33861] Length = 494 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 44/258 (17%), Positives = 98/258 (37%), Gaps = 11/258 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK L IL+ + F+++ ++F+ ++ + + I+ + ++L++ GY Sbjct: 1 MKKIHLLILQSFIKPFIVTFCIVMFVLLMLFLFKYIDDLIGKGFEWYVILQLIGYQCAVQ 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + ++ + EL+ I G S + P+ L L S F+ + Sbjct: 61 MQMALPLSMLLSSIMTFGNLGESYELVAIKAAGVSLRKAMTPLFILVALFSAGSFLFSDY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVD-S 178 I P + L + ++ +F I+ + + T L + I D + Sbjct: 121 ILPVVNLKMGSLLYDVRNKKADFLIKPGIFNNTIPGYAIRAKSKSKDGTVLNELMIYDHT 180 Query: 179 RDTQTHKIYYAQSGSIDLDRQ----AIILNDGEVHRKSPISKDISI---MKFKSYTLQTE 231 + ++ + A+ G + + L DG + +S S +F + + Sbjct: 181 SGSSSNNVLLAKEGFVQNSPDNSYMVLKLKDGIRYEESKGKDSKSYDPRKQFVRFQFKET 240 Query: 232 SA--NSSTIVLKANDQNL 247 + +K D+NL Sbjct: 241 EQKFDMGDFQMKRTDENL 258 Score = 45.7 bits (107), Expect = 0.011, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 51/115 (44%), Gaps = 7/115 (6%) Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 L N +R + + YR EFH++ T + ++ I A A++R+ Sbjct: 347 TETLGNKTLEYKAFRDKDI-RYRLEFHRKFTLAVSCLLLFGIG---APLGAIIRKGGLGL 402 Query: 307 PIFISLSISFGVFWGFSYIIHKIEQNPYYIPI--LYLFLFCISSIFLLMIKKKYT 359 P+ +++ I F ++ S + K ++ P+ +++ + ++ + + + K T Sbjct: 403 PVVMAI-IFFLIYHIISTVSEKAAKDASLAPMTGMWMAIIVLTPLAIFLTYKSTT 456 >gi|326797997|ref|YP_004315816.1| permease YjgP/YjgQ family protein [Sphingobacterium sp. 21] gi|326548761|gb|ADZ77146.1| permease YjgP/YjgQ family protein [Sphingobacterium sp. 21] Length = 505 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 42/257 (16%), Positives = 100/257 (38%), Gaps = 10/257 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + +L+ + F+++ ++F+ ++ + + I+ + ++L++ Y Sbjct: 15 MKKVHVLVLKAFFKPFIVTFFIVMFVLLMLFLFKYIDDLIGKGFEWYVILELLWYASAAQ 74 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + ++ + EL+ I G S + P++ L L+SI F + Sbjct: 75 ISMAMPLAMLLSSIMTFGNLGESYELVAIKAAGISLRKAMMPLIILVSLISIGSFFFSDY 134 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSR 179 I P + L + +++ +F I+ + + T L + I Sbjct: 135 ILPVTNLKMGSLLYDVRNKKADFLIKDGIFNNSIPGYSIRAKNKSKDGTVLYNLIIYQHG 194 Query: 180 D-TQTHKIYYAQSGSI----DLDRQAIILNDGEVHRKSPISKDISI--MKFKSYTLQTES 232 + ++ + A+ G + D + + L DG + ++ +F Y Sbjct: 195 NISRGTNVLLAKEGVMYNSRDNNYMILKLKDGVRYEETTAGDRSYNPRQQFTRYYFDQTE 254 Query: 233 A--NSSTIVLKANDQNL 247 + ST +K D++L Sbjct: 255 QKFDMSTFQMKRTDEDL 271 >gi|53711884|ref|YP_097876.1| hypothetical protein BF0593 [Bacteroides fragilis YCH46] gi|60680112|ref|YP_210256.1| putative permease [Bacteroides fragilis NCTC 9343] gi|52214749|dbj|BAD47342.1| conserved hypothetical protein [Bacteroides fragilis YCH46] gi|60491546|emb|CAH06298.1| putative permease [Bacteroides fragilis NCTC 9343] Length = 636 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 43/266 (16%), Positives = 105/266 (39%), Gaps = 22/266 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K +++I++ F+ + +FI + + + ++ + +++L + Y ++ Sbjct: 4 IKRLDIFIIKSFLLLFVGTFFICLFIFMMQFLWKYVDELVGKGLEMSVLAQFFFYSALSL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +PM P + + + ELL + G S + +++P++ L + F +N+ Sbjct: 64 VPMSLPLAVLLASLITFGNFGERFELLAMKAAGISLLKIMRPLIVLVFAICCVSFYFQNV 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 I P+ ++ + L + + E +F+ D +K+ + + L + I D Sbjct: 124 IGPQAQAKLGTLLISMKQKSPEVDIPEGVFYDEIDGYNLKVQRKDRKTGMLYDVIIYDFS 183 Query: 180 DT-QTHKIYYAQSGSIDLDRQ----AIILNDGEV---------------HRKSPISKDIS 219 + +I A SG +++ + L GE+ +R+ + S Sbjct: 184 NNFDNARIIVADSGRLEMTADKQHLYLHLYSGEMFENLKAQSMSSKNVPYRRESFREKHS 243 Query: 220 IMKFKSYTLQTESANSSTIVLKANDQ 245 I++F S A+ + D Sbjct: 244 IIQFDS-DFNMADASIMSNQSTTKDM 268 >gi|56479504|ref|YP_161093.1| hypothetical protein ebA7173 [Aromatoleum aromaticum EbN1] gi|56315547|emb|CAI10192.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1] Length = 359 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 51/360 (14%), Positives = 131/360 (36%), Gaps = 18/360 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F + R +S + + I + +++ + + + +L + G+ + LP Sbjct: 2 IFSRALQREFFQSAAGVFVALFAILITVVLIRLLGQAAGGRLPSDAVLALIGFGSLSRLP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V + L+ R++E+++ +G I+PVL A+ + + + + Sbjct: 62 IVLSLTVFIAVLLSLSRSYRDSEMVVWFASGLPLTAFIRPVLRFALPIVLTIAAVTLFVA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP--NNTLQGIFIVDSRD 180 P + + A+ S + +F + + + ++ +F+ +D Sbjct: 122 PWAQLKSAEYQARIDSRNDASRIAPGVFRESVGAQRVFFVETGAGEDGKVRNVFVSTEKD 181 Query: 181 TQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + I A+ GS+ D + ++L G + P S + +++F Y++ E ++ Sbjct: 182 GRLDVIVSAE-GSLRTDAEGDRFVVLEKGRRYEGEPGSPEYRVLEFDRYSVLVEEREAAG 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + LL P ELL R+ + ++ L++I Sbjct: 241 PASRTSTTPTLELLA--DPTPRKLGELLG--------RIGMPVAALLLALMAIP--LSFV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 R + + +F L+ + + + ++L + ++ LM ++ Sbjct: 289 NPRAGRANNLLFAILTYLVYSNAISVFQAWVSQGRLRFELAVWLPHVVVLAVLALMFYRR 348 >gi|300703337|ref|YP_003744939.1| permease [Ralstonia solanacearum CFBP2957] gi|299071000|emb|CBJ42309.1| putative permease, predicted YjgP/YjgQ family [Ralstonia solanacearum CFBP2957] Length = 372 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 57/361 (15%), Positives = 125/361 (34%), Gaps = 20/361 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + L ++ +++ + + ++ S N +L + G L Sbjct: 2 IFEQALRRELSFTAGAVFLVLLTFMLTTLVIRILGMAANGEASPNDVLLLIGLATLGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT +++E+++ G S I+PVL ++ + + + Sbjct: 62 ILLCATLFISVLLVLTRWYKDSEMVVWFTAGLSLTDFIRPVLRFSLPFVVLVALLALFGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYNPN-NTLQGIFIVDSRD 180 P + + S + F Y+ I + + +F+ ++ + Sbjct: 122 PWANQQSALFRDRFEQRDVLSMISAGRFIEPAHGNYVLFIEGVDAGMKHARNLFVANA-E 180 Query: 181 TQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANSS 236 + A++G ++L+ G + +P D I++F Y ++ S Sbjct: 181 ADKIGVALAKTGEFKTSPNGDRYVLLDKGRRYEGTPGQLDYRIVEFDRYGVKVASKPPQV 240 Query: 237 TIVLKANDQNLSFLL-NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA-D 294 L + + LL NP P N E R+ L + F LI++ A Sbjct: 241 DANLPTKSRPTTELLSNPTPENLG-----------ELVWRIGLPLLALNFVLIAVPLAYV 289 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 L R I + I L+ S + +++ ++L F + + Sbjct: 290 NPRLGRYTPMIFAVLIYLTYSNLLNLSQAWVAQGKMNAMLAWWPIHLLAFVCAVLLFRFR 349 Query: 355 K 355 Sbjct: 350 H 350 >gi|257454352|ref|ZP_05619615.1| permease YjgP/YjgQ family protein [Enhydrobacter aerosaccus SK60] gi|257448255|gb|EEV23235.1| permease YjgP/YjgQ family protein [Enhydrobacter aerosaccus SK60] Length = 385 Score = 135 bits (339), Expect = 2e-29, Method: Composition-based stats. Identities = 60/365 (16%), Positives = 129/365 (35%), Gaps = 25/365 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + + + LF++ + ++++ + + + +L I GY IPT L Sbjct: 10 ILRRYMTQQVAANTAIVLLFLMALMLGGRLIRYFGIAAEGRLDVGLLFAIIGYNIPTFLE 69 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + VL M + E+ ++ +G SR L + ++ L L IF + + Sbjct: 70 LILPLSFFIALMLVLGRMYVDQEMSVLFASGISRGRLTRLMIPLITGLFIFQMGISLLAK 129 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSRD- 180 P S KQ+ L + F + ++ + ++N L+ +++V + Sbjct: 130 PWGLSNSKQIWQTQSLGSLLDLVRPKTFIS-SGNYHLYVDEFNKEKRELKNLYVVQQQTD 188 Query: 181 -----TQTHKIYYAQSGSIDLDRQA-----IILNDGEVHRKSPISKDISIMKFKSYTLQT 230 + I A + + L G + + + F+ Y + Sbjct: 189 KSGKIAKNDVIITATRAYQVPSKDTDSSMQLDLFQGRRYELGTNNAKYNQASFEKYRITL 248 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 E S TI + + L + P + +E R T +I +++ Sbjct: 249 EKPASETITETNVETQTTAKLLAHTQKPEVK--------AELGYRFTMPWLIIIAAMLAT 300 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 A R + ++ P + + I K + Y Y++L F Sbjct: 301 PLAQVRPRQGRWLRLLPSVLIFASCAISIISLRTAIGKERISEYA----YIWLIVGFIAF 356 Query: 351 LLMIK 355 L++ Sbjct: 357 ALLLN 361 >gi|227536228|ref|ZP_03966277.1| YjgP/YjgQ family permease [Sphingobacterium spiritivorum ATCC 33300] gi|227243835|gb|EEI93850.1| YjgP/YjgQ family permease [Sphingobacterium spiritivorum ATCC 33300] Length = 494 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 44/258 (17%), Positives = 98/258 (37%), Gaps = 11/258 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK L IL+ + F+++ ++F+ ++ + + I+ + ++L++ GY Sbjct: 1 MKKIHLLILQSFIKPFIVTFCIVMFVLLMLFLFKYIDDLIGKGFEWYVILQLIGYQCAVQ 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + ++ + EL+ I G S + P+ L L S F+ + Sbjct: 61 MQMALPLSMLLSSIMTFGNLGESYELVAIKAAGVSLRKAMTPLFILVALFSAGSFLFSDY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVD-S 178 I P + L + ++ +F I+ + + T L + I D + Sbjct: 121 ILPVVNLKMGSLLYDVRNKKADFLIKPGIFNNTIPGYAIRAKSKSKDGTVLNELMIYDHT 180 Query: 179 RDTQTHKIYYAQSGSIDLDRQ----AIILNDGEVHRKSPISKDISI---MKFKSYTLQTE 231 + ++ + A+ G + + L DG + +S S +F + + Sbjct: 181 SGSSSNNVLLAKEGFVQNSPDNNYMVLRLKDGIRYEESKGKDSKSYDPRKQFVRFQFKET 240 Query: 232 SA--NSSTIVLKANDQNL 247 + +K D+NL Sbjct: 241 EQKFDMGDFQMKRTDENL 258 Score = 45.0 bits (105), Expect = 0.020, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 51/115 (44%), Gaps = 7/115 (6%) Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 L N +R + + YR EFH++ T + ++ I A A++R+ Sbjct: 347 TETLGNKTLEYKAFRDKDI-RYRLEFHRKFTLAVSCLLLFGIG---APLGAIIRKGGLGL 402 Query: 307 PIFISLSISFGVFWGFSYIIHKIEQNPYYIPI--LYLFLFCISSIFLLMIKKKYT 359 P+ +++ I F ++ S + K ++ P+ +++ + ++ + + + K T Sbjct: 403 PVVMAI-IFFLIYHIISTVSEKAAKDASLAPMTGMWMAIIILTPLAIFLTYKSTT 456 >gi|53803848|ref|YP_114530.1| hypothetical protein MCA2100 [Methylococcus capsulatus str. Bath] gi|53757609|gb|AAU91900.1| conserved hypothetical protein [Methylococcus capsulatus str. Bath] Length = 339 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 49/344 (14%), Positives = 112/344 (32%), Gaps = 23/344 (6%) Query: 26 IAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTE 85 I + L + + + + + G + L + P + VL M R+ E Sbjct: 3 IVVSRKFLAILARAIEGEVATDTIFTLLGLKVVVTLASLLPASVFLSVLMVLGRMYRDNE 62 Query: 86 LLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYL 145 + + G + + + +L A + + P ++L +K + + Sbjct: 63 MTVFACAGVGPLRIYRSILLFAGPVCVLGAFLSLQAMPWSERLSQELISKDEKGADVRGI 122 Query: 146 EENLFFRLD-DDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQA---I 201 + F D+ + + N + T+ +F SR I A+SG ++++ + Sbjct: 123 KAGRFNEFSQGDVVLYAEQLNTDKTMSRVF-AQSRRGDETGIVIAESGHMEINDAGDHFV 181 Query: 202 ILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYR 261 +LN+G ++ P D + +F++Y ++ S LK ++ + Sbjct: 182 VLNNGRRYQGVPGRADFVLNEFQAYGVRINPPEGSQAALK----------REAADSLHLW 231 Query: 262 PELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGV--- 318 +E +RL L L+++ A + + + I Sbjct: 232 MSGRPRELAELQRRLAVPLGTFTLTLLAVPIA---RTSPRGGVWGNLISAFLIYIIYENL 288 Query: 319 --FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 K+ Y I + L S + ++ + Sbjct: 289 QKISQGLLATGKLSVWTSYAGIYAVMLLATSVLLARNSGWRWVR 332 >gi|170718034|ref|YP_001785074.1| permease YjgP/YjgQ family protein [Haemophilus somnus 2336] gi|168826163|gb|ACA31534.1| permease YjgP/YjgQ family protein [Haemophilus somnus 2336] Length = 367 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 59/358 (16%), Positives = 134/358 (37%), Gaps = 24/358 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + RS + ++ + + Q+++ + S +++ + +PT+ Sbjct: 2 ILIRYLTKEVFRSQIAILSILLLLFFSQQLVRVLGSASVGKIPADLVFALLSLGMPTMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P C + + +E+ ++ G + L+ L L++L + + + Sbjct: 62 LIFPLCLFIAILLTFGRLYAESEITVMRACGVGQRILVGVALILSLLTAGLATYNVFYLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIKISKYNPNNTLQGIFIV--DSR 179 P QL A+ T L F + + D+ + I++ NN +Q I++ +++ Sbjct: 122 PWAMQKQIQLIDDAKANPTMGALASGQFVNVGNTDVVLFINEI-KNNQIQDIYVFQMENK 180 Query: 180 DTQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 Q + A++G + Q + L + + S + D I F Y + + Sbjct: 181 KNQKPSVTVAETGQLKALPNGDQVLSLENSQRVEGSALLPDFRITHFDQYQAYLDYKTTD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + +L L+N +P + +E H RLT I LI++ R Sbjct: 241 KDTSETEILSLKELIN--SKSPAAK--------AELHWRLTLIFAVPIMALIAVP--LSR 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RQ + F + + ++ + + ++ I + SIF L + Sbjct: 289 VNPRQGR-----FAKILPALLLYLIYFLLQSSLKSAGASGKIEAHIFMPLVSIFFLFL 341 >gi|294782104|ref|ZP_06747430.1| permease, YjgP/YjgQ family [Fusobacterium sp. 1_1_41FAA] gi|294480745|gb|EFG28520.1| permease, YjgP/YjgQ family [Fusobacterium sp. 1_1_41FAA] Length = 359 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 62/353 (17%), Positives = 122/353 (34%), Gaps = 9/353 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YIL + +++ FI + ++ + + S+ +L++ + IP + Sbjct: 1 MKIINKYILDELKGPIILAVFVFTFIFLLDIVVTMMEHIIVKGISVFDVLRLLSFYIPPI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + T +RN+E + + +TG S ++KP+L +AI +IF+ + Sbjct: 61 LTQTIPIGMFLGIMICFTKFSRNSESVAMVSTGMSIRAILKPILAIAIGSAIFILFLQES 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD--S 178 I P+ +K + K L+E F D I + K + + I + Sbjct: 121 IIPRSFVKLKYVGTKIAYENPVFQLKEKTFIDNLDQYSIYVDKVESDGKAKNIIAFEKPE 180 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 T+ + + + +IIL + K F + + + Sbjct: 181 DKTKFPMVLTGEEAFWKDN--SIILKQSQFISFDETGKKNLTGTFDEKRVVL-TPYFENL 237 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 LK D + + N E + Y+ E ++L + +I +L Sbjct: 238 NLKIKDVEALSITDLVKNIRKVEAEEVLKYKIEIFRKLALIFSTIPLAVIGFCL----SL 293 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 R F+ I + F I + P + + + FL Sbjct: 294 GHHRISKKYSFVLAMIIIFAYIIFLNIGIVMASAGKLHPFIATWTPNVLLYFL 346 >gi|168464639|ref|ZP_02698542.1| putative permease [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195632768|gb|EDX51222.1| putative permease [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 366 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 53/357 (14%), Positives = 127/357 (35%), Gaps = 22/357 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ I ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKTVLVKAAMVLALFTGILAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + + + + + +F+ R Sbjct: 122 PWSSKHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFHDVFLAQIRPKG 181 Query: 183 T--HKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F++Y + Sbjct: 182 NARPSVVVADSGHLTQLRDGSQVVTLNKGTRFEGTALLRDFRITDFQNYQAIIGHQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L N + + R+E H R+T + L+ + Sbjct: 242 DPNDTDQMDMRTLWNTDND----------RARAELHWRITLVFTVFMMALMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RQ + +S+ + ++ F I I+ N + + ++ L + Sbjct: 290 NPRQGR-----VLSMLPAMLLYLLFFLIQTSIKSNGGKGKLDPVIWMWAVNLIYLAL 341 >gi|284036898|ref|YP_003386828.1| permease YjgP/YjgQ family protein [Spirosoma linguale DSM 74] gi|283816191|gb|ADB38029.1| permease YjgP/YjgQ family protein [Spirosoma linguale DSM 74] Length = 501 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 52/272 (19%), Positives = 99/272 (36%), Gaps = 28/272 (10%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + +L F ++ ++FI + ++ I+ S L ++ Y Sbjct: 1 MKKIDKLVLGSFWGPFFLTLGVVIFIFLMRLLMFYIDEFVSKDLDLATFGRLLFYFALLT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P P + + ++ EL + + G S ++P+L +AI +S F F N Sbjct: 61 IPTALPLAVLLSSLMTFGNLGEFFELTALKSAGISLTRAMRPLLIVAIGISAFSFWFNNS 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKY-------NPNNTLQGI 173 + P L + A L+E +F+ IK+ + + L+G+ Sbjct: 121 VAPWANLKGYSLLYDIKTAKATLNLKEGIFYNDLPGYSIKVDRKIKAEKGSTTGDLLKGL 180 Query: 174 FIVDSR----DTQTHKIYYAQSGSI--DLDRQAII--LNDGEVHRK-----------SPI 214 I +T +I A SG + D DR ++ L +G +++ P Sbjct: 181 VIYKHPTSGLETGNREIILADSGRMYTDKDRTYLVFQLFNGNDYQEYSDNSISYASSGPT 240 Query: 215 SKDISIMK--FKSYTLQTESANSSTIVLKAND 244 ++ M+ FK Y L + N Sbjct: 241 AQGAQFMRNGFKDYKLVISLESFGIKRTDENQ 272 Score = 36.5 bits (83), Expect = 6.4, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 41/99 (41%), Gaps = 4/99 (4%) Query: 261 RPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFW 320 + + + Y+ E H + TQ + + LI A A++++ P+ I++ ++ Sbjct: 371 KEKNVWRYQLETHHKFTQAISVFVMFLIG---ASMGAIIKKGGFGLPVLIAIVFFIFLYV 427 Query: 321 GFSYIIHKIEQNPYYIPI-LYLFLFCISSIFLLMIKKKY 358 + ++PI +L + LL++++ Sbjct: 428 LTIAGDKYAKDGLLWVPIGAWLANIVLFPFGLLLMQRAR 466 >gi|22299113|ref|NP_682360.1| hypothetical protein tll1570 [Thermosynechococcus elongatus BP-1] gi|22295295|dbj|BAC09122.1| tll1570 [Thermosynechococcus elongatus BP-1] Length = 378 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 60/367 (16%), Positives = 139/367 (37%), Gaps = 16/367 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVI-QILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y+L + F++ +A + I + ++ + L ILL++ GY +P VL Sbjct: 15 KLDQYLLSLLLPGFVLGLTVFTTLALTVGTIFDLVRQIADAQLPLTILLQLIGYQLPAVL 74 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 +V P + ++ ++ E + + + G ++ PV+ A+L+S Sbjct: 75 VLVFPMAVLLAVVGAMSRLSEEGEWIALRSVGICLGRVLIPVVVFALLVSGLTLALNETA 134 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD----LYIKISKYNPNNTLQGIFIVD 177 P + K+L + ++F+ D + + +QGI ++D Sbjct: 135 VPIAKYESKKLMGELLQQERSLGSGTDIFYPEYDRHGNVRRLYYGHRFDGSRIQGITVLD 194 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 Q ++ A+S ++ +L+ G + S ++++F ++ S Sbjct: 195 FSQPQVTQVISAESAEWNVRESRWLLSQGIAYLISHTGVSRNLLQFDQQEIRLPRPAQSQ 254 Query: 238 --IVLKANDQNLSFLLNPNPN-NPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 N+ +++ +P+ PEL+ + + Q V+F L+ + Sbjct: 255 PLRPTDVNELSITQARRALQRLDPDREPELVRALKVHLAQSYAQPFLAVVFALLGVGFGL 314 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL----FCISSIF 350 + QR+ IS+++ FG + ++ + P+ +L + +I Sbjct: 315 SPS---QRRGRQGFGISVAVVFGQYVLTFFL-GALGTTGTLSPLAAAWLPHSIGLVVAIA 370 Query: 351 LLMIKKK 357 LL + Sbjct: 371 LLWRADR 377 >gi|113460662|ref|YP_718728.1| permease [Haemophilus somnus 129PT] gi|112822705|gb|ABI24794.1| conserved permease [Haemophilus somnus 129PT] Length = 367 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 59/358 (16%), Positives = 134/358 (37%), Gaps = 24/358 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + RS + ++ + + Q+++ + S +++ + +PT+ Sbjct: 2 ILIRYLTKEVFRSQIAILSILLLLFFSQQLVRVLGSASVGKIPADLVFALLSLGMPTMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P C + + +E+ ++ G + L+ L L++L + + + Sbjct: 62 LIFPLCLFIAILLTFGRLYAESEITVMRACGVGQRILVGVALILSLLTAGLATYNVFYLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIKISKYNPNNTLQGIFIV--DSR 179 P QL A+ T L F + + D+ + I++ NN +Q I++ +++ Sbjct: 122 PWAMQKQIQLIDDAKANPTMGALASGQFVNVGNTDVVLFINEI-KNNQIQDIYVFQMENK 180 Query: 180 DTQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 Q + A++G + Q + L + + S + D I F Y + + Sbjct: 181 KNQKPSVTVAETGQLKVLPNGDQVLSLENSQRVEGSALLPDFRITHFDQYQAYLDYKTTD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + +L L+N +P + +E H RLT I LI++ R Sbjct: 241 KDTSETEILSLKELIN--SKSPAAK--------AELHWRLTLIFAVPIMALIAVP--LSR 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RQ + F + + ++ + + ++ I + SIF L + Sbjct: 289 VNPRQGR-----FAKILPALLLYLIYFLLQSSLKSAGASGKIEAHIFMPLVSIFFLFL 341 >gi|16763279|ref|NP_458896.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29144758|ref|NP_808100.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|62182905|ref|YP_219322.1| putative permease [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161617773|ref|YP_001591738.1| hypothetical protein SPAB_05636 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167551265|ref|ZP_02345020.1| putative permease [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168232819|ref|ZP_02657877.1| putative permease [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168234609|ref|ZP_02659667.1| putative permease [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168244032|ref|ZP_02668964.1| putative permease [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168262478|ref|ZP_02684451.1| putative permease [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168821096|ref|ZP_02833096.1| putative permease [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194445077|ref|YP_002043718.1| putative permease [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194450320|ref|YP_002048502.1| permease [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194468992|ref|ZP_03074976.1| putative permease [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194736994|ref|YP_002117399.1| putative permease [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197250300|ref|YP_002149398.1| putative permease [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197262941|ref|ZP_03163015.1| putative permease [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198242439|ref|YP_002218342.1| putative permease [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200386849|ref|ZP_03213461.1| putative permease [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204927295|ref|ZP_03218497.1| putative permease [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205355210|ref|YP_002229011.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207859604|ref|YP_002246255.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213022334|ref|ZP_03336781.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] gi|213427635|ref|ZP_03360385.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213618569|ref|ZP_03372395.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213650368|ref|ZP_03380421.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|238910634|ref|ZP_04654471.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289824526|ref|ZP_06544085.1| putative permease [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25309681|pir||AF1061 probable inner membrane protein STY4817 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16505587|emb|CAD06939.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29140397|gb|AAO71960.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|62130538|gb|AAX68241.1| putative permease [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161367137|gb|ABX70905.1| hypothetical protein SPAB_05636 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194403740|gb|ACF63962.1| putative permease [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194408624|gb|ACF68843.1| putative permease, YjgP/YjgQ family [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194455356|gb|EDX44195.1| putative permease [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194712496|gb|ACF91717.1| putative permease [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197214003|gb|ACH51400.1| putative permease [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197241196|gb|EDY23816.1| putative permease [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197291917|gb|EDY31267.1| putative permease [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197936955|gb|ACH74288.1| putative permease [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199603947|gb|EDZ02492.1| putative permease [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204323960|gb|EDZ09155.1| putative permease [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205274991|emb|CAR40065.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205323849|gb|EDZ11688.1| putative permease [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205332944|gb|EDZ19708.1| putative permease [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205337037|gb|EDZ23801.1| putative permease [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205342368|gb|EDZ29132.1| putative permease [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205348722|gb|EDZ35353.1| putative permease [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206711407|emb|CAR35786.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|320088910|emb|CBY98668.1| Lipopolysaccharide export system permease protein lptF [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|322615642|gb|EFY12562.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618702|gb|EFY15591.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322621885|gb|EFY18735.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627610|gb|EFY24401.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322630916|gb|EFY27680.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637865|gb|EFY34566.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642323|gb|EFY38929.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322643902|gb|EFY40450.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322651022|gb|EFY47407.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322656725|gb|EFY53013.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659851|gb|EFY56094.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322661938|gb|EFY58154.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322666314|gb|EFY62492.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322672733|gb|EFY68844.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676163|gb|EFY72234.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680647|gb|EFY76685.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684459|gb|EFY80463.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322717408|gb|EFZ08979.1| putative permease [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323194204|gb|EFZ79401.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323197349|gb|EFZ82489.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201533|gb|EFZ86597.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206047|gb|EFZ91009.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213058|gb|EFZ97860.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215429|gb|EGA00173.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323219413|gb|EGA03898.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227717|gb|EGA11871.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323228887|gb|EGA13016.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323236501|gb|EGA20577.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239998|gb|EGA24045.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323241955|gb|EGA25984.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323247896|gb|EGA31833.1| lipopolysaccharide ABC transporter permease LptF [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251466|gb|EGA35337.1| lipopolysaccharide ABC transporter permease LptF [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258168|gb|EGA41845.1| lipopolysaccharide ABC transporter permease LptF [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323263686|gb|EGA47207.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323265718|gb|EGA49214.1| lipopolysaccharide ABC transporter permease LptF [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270162|gb|EGA53610.1| lipopolysaccharide ABC transporter permease LptF [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326630368|gb|EGE36711.1| putative permease [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 366 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 53/357 (14%), Positives = 127/357 (35%), Gaps = 22/357 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ I ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMVLALFTGILAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + + + + + +F+ R Sbjct: 122 PWSSKHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFHDVFLAQIRPKG 181 Query: 183 T--HKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F++Y + Sbjct: 182 NARPSVVVADSGHLTQLRDGSQVVTLNKGTRFEGTALLRDFRITDFQNYQAIIGHQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L N + + R+E H R+T + L+ + Sbjct: 242 DPNDTDQMDMRTLWNTDND----------RARAELHWRITLVFTVFMMALMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RQ + +S+ + ++ F I I+ N + + ++ L + Sbjct: 290 NPRQGR-----VLSMLPAMLLYLLFFLIQTSIKSNGGKGKLDPVIWMWAVNLIYLAL 341 >gi|16767724|ref|NP_463339.1| permease [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167991268|ref|ZP_02572367.1| putative permease [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|16423044|gb|AAL23298.1| putative permease [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|205330408|gb|EDZ17172.1| putative permease [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|261249567|emb|CBG27434.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267996823|gb|ACY91708.1| putative permease [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301160963|emb|CBW20497.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312915575|dbj|BAJ39549.1| putative permease [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|323132816|gb|ADX20246.1| putative permease [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332991288|gb|AEF10271.1| putative permease [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 366 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 53/357 (14%), Positives = 127/357 (35%), Gaps = 22/357 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ I ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMVLALFTGILAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + + + + + +F+ R Sbjct: 122 PWSSKHQDEVLAEAKANPGMAALAQGQFQQATNGNSVLFIESVDGSDFHDVFLAQIRPKG 181 Query: 183 T--HKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F++Y + Sbjct: 182 NARPSVVVADSGHLTQLRDGSQVVTLNKGTRFEGTALLRDFRITDFQNYQAIIGHQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L N + + R+E H R+T + L+ + Sbjct: 242 DPNDTDQMDMRTLWNTDND----------RARAELHWRITLVFTVFMMALMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RQ + +S+ + ++ F I I+ N + + ++ L + Sbjct: 290 NPRQGR-----VLSMLPAMLLYLLFFLIQTSIKSNGGKGKLDPVIWMWAVNLIYLAL 341 >gi|238755186|ref|ZP_04616532.1| Inner membrane protein yjgP [Yersinia ruckeri ATCC 29473] gi|238706633|gb|EEP99004.1| Inner membrane protein yjgP [Yersinia ruckeri ATCC 29473] Length = 364 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 55/367 (14%), Positives = 134/367 (36%), Gaps = 25/367 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFSQKLVRVLGAAVDGEIPTNLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ G + LI L L++L S ++ + Sbjct: 62 LILPLSLFLGLLMTYGKLYTESEITVMHACGLGKRPLIIAALILSMLTSGLAAVNAIWLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR--D 180 P ++ A+ + + L E F D + Q +F+ R D Sbjct: 122 PWSSKHQDEVLNDARANPSLAALVEGQFQSSQDGNAVLFVGSVSGKEFQRVFLAQLRPSD 181 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 Q + A G + Q ++LN G + + + +D I F Y + Sbjct: 182 NQRPSVVVADKGHMAERPDGSQVVLLNQGTRYEGTALLRDFRITDFTDYQAVIGHQVAQQ 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +++ L + + + R+EFH RLT + VI ++ + Sbjct: 242 DNNIVEQMSMAALWHSSEQDA----------RAEFHWRLTLIVSVVIMAMLVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFLFCISSIFLLMI 354 RQ + +S+ + ++ F + + N P++++++ + + L ++ Sbjct: 290 NPRQGR-----VLSMLPAMLLYLIFFLLQSSLRSNGAKGKLDPMVWIWVVNGAYLALALV 344 Query: 355 KKKYTKI 361 + + Sbjct: 345 LNLWDSL 351 >gi|255009764|ref|ZP_05281890.1| putative permease [Bacteroides fragilis 3_1_12] gi|313147551|ref|ZP_07809744.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313136318|gb|EFR53678.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 634 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 42/266 (15%), Positives = 105/266 (39%), Gaps = 22/266 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K +++I++ F+ + +FI + + + ++ + +++L + Y ++ Sbjct: 4 IKRLDIFIIKSFLLLFVGTFFICLFIFMMQFLWKYVDELVGKGLEMSVLAQFFFYSALSL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +PM P + + + ELL + G S + +++P++ L + F +N+ Sbjct: 64 VPMSLPLAVLLASLITFGNFGERFELLAMKAAGISLLKIMRPLIVLVFAICCVSFYFQNV 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 I P+ ++ + L + + E +F+ D +K+ + + L + I D Sbjct: 124 IGPRAQAKLGTLLISMKQKSPEVDIPEGVFYDEIDGYNLKVQRKDRKTGMLYDVIIYDFS 183 Query: 180 DT-QTHKIYYAQSGSIDLDRQ----AIILNDGEV---------------HRKSPISKDIS 219 + +I A SG +++ + L GE+ +R+ + + Sbjct: 184 NNFDNARIIVADSGRLEMTADKQHLYLHLYSGEMFENLKAQSMSSKNVPYRRESFREKHT 243 Query: 220 IMKFKSYTLQTESANSSTIVLKANDQ 245 I++F S A+ + D Sbjct: 244 IIQFDS-DFNMADASIMSNQSTTKDM 268 >gi|313672806|ref|YP_004050917.1| permease yjgp/yjgq family protein [Calditerrivibrio nitroreducens DSM 19672] gi|312939562|gb|ADR18754.1| permease YjgP/YjgQ family protein [Calditerrivibrio nitroreducens DSM 19672] Length = 345 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 61/354 (17%), Positives = 138/354 (38%), Gaps = 20/354 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YIL I F++S +F +FI +++ +LV S I+++ + +P+ Sbjct: 1 MNKLSKYILEEIYPIFIISNIFFIFILLFDKVVDLTDLVFSKNVPTIIIIETFIFYLPSF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + ++ + EL+++ + G S ++L+KP ++ IL ++ F++ Sbjct: 61 MMVTIPTSALLAVMTAHNRLSSDAELVVMKSLGLSPMSLLKPTIYFGILATLLAFLTSFY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + ++ ++EN F++ + I + K +N I ++D Sbjct: 121 LLPYGNKYAIYNLKRTVEYVSLKDIKENEFYKEIPSIAIYVKKKVDDNKFLQITLIDE-- 178 Query: 181 TQTHKIYYAQSGSIDLDRQAII--LNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + A A++ L +G + + ++FK + ++ Sbjct: 179 -KGGSLITAAEADAYQKFGAVVFDLKNGAI--IQGKNDRYGKIEFKKFYFVVNVDSNLNR 235 Query: 239 VLKAND-QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +K+ + L+ R Y+ EF KR+ +I L+ + + Sbjct: 236 EIKSERFMFMDELI--------SRFNDGYIYKFEFSKRVALPFSTLIMALLGL---NMGV 284 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-NPYYIPILYLFLFCISSIF 350 + + I+L I F + + NPY+ P + +F S+ Sbjct: 285 FFHRANRSINWIIALGIIFSYNVIMFMSENLAGKINPYFAPWIANTIFAFLSLI 338 >gi|195940457|ref|ZP_03085839.1| permease YjgP/YjgQ family protein [Escherichia coli O157:H7 str. EC4024] Length = 366 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 56/359 (15%), Positives = 133/359 (37%), Gaps = 27/359 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGEIPTNLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ I ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMVLALFTGIVAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + D + + N +F+ R Sbjct: 122 PTSSRHQDEVLAEAKANPGLAALAQGQFQQATDGNSVLFIESVDGNRFNDVFLAQLRPKG 181 Query: 183 T--HKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F++Y + Sbjct: 182 NARPSVVVADSGQLAQRKDGSQVVTLNKGTRFEGTAMLRDFRITDFQNYQAIIGHQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 ++ L+N + + R+E H R+T + L+ + Sbjct: 242 DPTDTEQMDMRTLMNTD----------TDRARAELHWRITLVFTVFMMALMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFLFCISSIFLLM 353 RQ + +S+ + ++ F + I+ N P+++ + ++ ++LL+ Sbjct: 290 NPRQGR-----VLSMLPAMLLYLVFFLLQTSIKSNGGKGKIDPMIW--TWVVNGLYLLL 341 >gi|104783411|ref|YP_609909.1| hypothetical protein PSEEN4442 [Pseudomonas entomophila L48] gi|95112398|emb|CAK17125.1| conserved hypothetical protein; putative membrane protein [Pseudomonas entomophila L48] Length = 371 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 59/360 (16%), Positives = 135/360 (37%), Gaps = 29/360 (8%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ R + + ++ I + ++ + + +L I G+ +P L ++ Sbjct: 5 RYLSREVLVTLSAVSAVLLVIIMSGRFIKYLAQAAQGVLDPGVLFMIMGFRLPGFLQLIL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + + +E+ ++ TG S+ L+ L A L+++ + + P Sbjct: 65 PLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLLAMTLAPAALVALLVAWLSLSLAPLG 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNT-LQGIFIVDSR---- 179 + ++++ A+ F L F L D + + + L G+FI + R Sbjct: 125 VAQVQKIIAQQDALTEFDTLVPGRFQTLRDGSRVTYTEQLSDDRINLAGVFISEKRFNQD 184 Query: 180 --DTQTHKIYYAQSGS--IDLDRQ-AIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + + A+ G + D ++L +G + +P D +K+ +Y + Sbjct: 185 KTKDRAPSVLVAEKGHQEVQADGNRYLVLQNGYRYDGNPGQADYRAIKYDTYGVLLPKPE 244 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + V + S L NP R R+E RL+ L + L+++ Sbjct: 245 VAEEVTEREAIPTSDLFG----NPGVRE------RAELQWRLSLPLLVFVVTLLAVP--L 292 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFLLM 353 R RQ + F+ L + ++ + ++ + + + L ++ + +FLL+ Sbjct: 293 SRVNPRQGR-----FLKLLPAILLYMAYLTMLISVRGALEKGKLPISLGIWWVHGLFLLI 347 >gi|311281181|ref|YP_003943412.1| permease YjgP/YjgQ family protein [Enterobacter cloacae SCF1] gi|308750376|gb|ADO50128.1| permease YjgP/YjgQ family protein [Enterobacter cloacae SCF1] Length = 366 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 60/357 (16%), Positives = 130/357 (36%), Gaps = 25/357 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGEIPTNLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ I ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILALFTGIVAALNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + D + + + +F+ R Sbjct: 122 PWSSRHQDEVLAEAKANPGMAALAQGQFQQASDGNSVLFIESVDGKKFRDVFLAQIRTKG 181 Query: 183 T--HKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG+I Q + LN+G + + +D + FK+Y S Sbjct: 182 NARPSVVVADSGNITQQKDGSQVVHLNEGTRFEGTAMLRDFRVTDFKNYQAIIGHQTVSL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 N+ L N + N R+E H RLT I L+ + Sbjct: 242 DPSDTEQMNMLTLWNTDTN----------GARAELHWRLTLVATVFIMALMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFLFCISSIFL 351 RQ + +S+ + ++ F + I N P++++++ + L Sbjct: 290 NPRQGR-----VLSMLPAMLLYLVFFLLQTSIRSNGEKGKLDPMVWMWVVNLLYFAL 341 >gi|253572213|ref|ZP_04849617.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|298387973|ref|ZP_06997521.1| permease [Bacteroides sp. 1_1_14] gi|251838393|gb|EES66480.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|298259239|gb|EFI02115.1| permease [Bacteroides sp. 1_1_14] Length = 632 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 44/268 (16%), Positives = 109/268 (40%), Gaps = 22/268 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K +++I++ F+ + +FI + + + ++ + ++++ + Y T+ Sbjct: 4 IKKLDIFIVKSFLMLFIGTFFICLFIFMMQFLWRYVDELVGKGLDMSVIAQFFFYSALTL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+ P + + + ELL + G S + +++P+ F L F +N+ Sbjct: 64 VPISLPLAILLASLITFGNFGERYELLAMKAAGISLLKIMRPLAFFVCGLVAVSFYFQNV 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 + P ++ + L + + E +F+ D +KI+K N + + I + + Sbjct: 124 VGPIAQTKLYTLIISMKQKSPELDIPEGVFYSEIPDYNLKIAKKNRKTGMMYDVLIYNLK 183 Query: 180 DT-QTHKIYYAQSGSIDLDRQA----IILNDGEV---------------HRKSPISKDIS 219 D + I YA SG +++ + L G++ +R+ + + Sbjct: 184 DGFENAHIIYADSGRMEMTADKQHLWLHLYSGDLFENLRSQSMKSQNVPYRREEFREKHT 243 Query: 220 IMKFKSYTLQTESANSSTIVLKANDQNL 247 I++F S A+ + A D ++ Sbjct: 244 IIEFDS-DFNMADASIMSNTSAAKDMSM 270 >gi|333029769|ref|ZP_08457830.1| permease YjgP/YjgQ family protein [Bacteroides coprosuis DSM 18011] gi|332740366|gb|EGJ70848.1| permease YjgP/YjgQ family protein [Bacteroides coprosuis DSM 18011] Length = 632 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 41/222 (18%), Positives = 89/222 (40%), Gaps = 6/222 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K + ++L+ G F+ + +FI + + + ++ + + +L + Y T+ Sbjct: 4 LKKLDKFVLKSFGLLFIATFFICLFIFMMQFLWRYVDDLVGKGLEMTVLGQFFFYSALTL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P P + + + ELL + G S +I+P++ LA+LL F+ +N Sbjct: 64 IPASLPLATLLASLITFGNFGERFELLAMKAAGISLFKIIRPLMILAVLLCGISFVFQNN 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 I PK S + L + + E +F+ D I + + + L + I + Sbjct: 124 IGPKAFSKLTTLLISIRQKSPELDIPEGIFYDEIDGYNIFVKEKDRKTGLLYDVIIYEFS 183 Query: 180 DT-QTHKIYYAQSGSIDLDRQ----AIILNDGEVHRKSPISK 216 + +I A +G + + + L GE+ + Sbjct: 184 EGFDNARIIVADTGQLAMTADKQYLYLHLYSGEMFENIRQTG 225 >gi|196228894|ref|ZP_03127760.1| permease YjgP/YjgQ family protein [Chthoniobacter flavus Ellin428] gi|196227175|gb|EDY21679.1| permease YjgP/YjgQ family protein [Chthoniobacter flavus Ellin428] Length = 376 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 59/378 (15%), Positives = 138/378 (36%), Gaps = 28/378 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQIL-QRINLVSSSTESLNILLKISGYLIPT 59 MK + Y+ + +F ++ + + + I Q ++L+ + L +++ Y++P Sbjct: 1 MKLIDRYVGGQLLVTFSLAVSVLSVVLVLGNIFKQLLDLLVKNDTPLEVVVSFLSYILPF 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 L P+ F V ++ EL+ +G S L V LA F Sbjct: 61 SLSFTIPWAFLTAVLLVFGRLSAEHELVAFRASGVSIPRLCYTVFLLAAACVATCFWINI 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P+ + +K+ + + +L + I + + + L + + +S Sbjct: 121 DVAPRAQGKMKEALYNVAVTNPLAMFGADLVIDSFPNKKIYL-ESSNGPELHNLLVYESN 179 Query: 180 DTQTHK-IYYAQSGSIDLD--RQAIILN----------DGEVHRKSPISKDISIMKFKSY 226 D + +A+ G I+ D ++ ++L+ D +V I + I++ + + Sbjct: 180 DDNLLLKVIFARRGLIETDGEKKQLLLHIYDATYEARDDDDVENLLKIKQGITMRE-ATL 238 Query: 227 TLQTESANSSTIVLKANDQNLSFLLNPNPN------NPNYRPELLETYRSEFHKRLTQWL 280 + E + LL+ R E +E +KR + L Sbjct: 239 PISLEELHKKYHKGGLPSMTTGALLDHLSEKTESTMTEKERIEQHSATITEINKRYSFSL 298 Query: 281 FPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP--I 338 + F L+ + A +++ ISL ++ V++ F I + + + P + P + Sbjct: 299 AAICFALVGVPLAI---TAHRKETSIGFLISLCVAL-VYYFFIIIANTVREKPQWHPAEL 354 Query: 339 LYLFLFCISSIFLLMIKK 356 +++ + + Sbjct: 355 VWVPNILCVVFGGWLFYR 372 >gi|253583478|ref|ZP_04860676.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725] gi|251834050|gb|EES62613.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725] Length = 362 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 61/366 (16%), Positives = 135/366 (36%), Gaps = 14/366 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K + YI + +SF +S + V I V Q+ + I VS S + + +IP + Sbjct: 3 IKIIDRYISKNFIKSFFLSLIAFVGIFLVSQLFKVIRYVSDGRFSADESIVYILTMIPKI 62 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V P + + ++SM N E++ + G S ++ +F++ +++I +F+ + Sbjct: 63 LIDVAPLAVLLGSLMTVSSMASNLEVISLKTAGISFKRIVLFPIFISAVIAIIVFLINDS 122 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIK-ISKYNPNNTL-QGIFIVDS 178 + P +++ + N F R ++ Y+ + K N + I IVD Sbjct: 123 LYPYSVRKNREIKDGGNTRREMPVEKRNAFLRGENSNYVYLMGKINRETGFGENIEIVDL 182 Query: 179 RD--TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + +I A+ G + ++ +L D ++ + K + F E Sbjct: 183 NEEFNKVERIITAKEGRYNFTKKVWVLKDANIYNGKELKKAEEVKLFTEDKYDDEPDKFI 242 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 T ++ + L + E R + I + + Sbjct: 243 TKSVEPKTLTIKEL-KKSVREIKSIGGDTRELLVEIGNRYSFPFSSFIISFLGLSLG--- 298 Query: 297 ALVRQRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLF---LFCISSIFLL 352 R + I ++LS++ G ++ + N + P + + + + Sbjct: 299 --SRYVRGASAISMALSVALGYGYYIVQASFEALSINGFLNPFISGWIPNIIFLGIGIYF 356 Query: 353 MIKKKY 358 M + +Y Sbjct: 357 MYRAEY 362 >gi|300690719|ref|YP_003751714.1| permease, predicted YjgP/YjgQ family [Ralstonia solanacearum PSI07] gi|299077779|emb|CBJ50417.1| putative permease, predicted YjgP/YjgQ family [Ralstonia solanacearum PSI07] Length = 372 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 58/361 (16%), Positives = 126/361 (34%), Gaps = 20/361 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + L ++ +++ + + ++ S N +L + G L Sbjct: 2 IFEQALRRELSFTAGAVFLVLLTFMLTTLVIRILGMAANGEASPNDVLLLIGLATLGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT +++E+++ G S I+PVL ++ + + + Sbjct: 62 ILLCATLFISVLLVLTRWYKDSEMVVWFTAGISLTDFIRPVLRFSLPFVVLVALLALFGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYNPN-NTLQGIFIVDSRD 180 P + + S + F Y+ I + + +F+ ++ Sbjct: 122 PWANQQSALFRDRFEQRDVLSMISAGRFIEPAHGNYVLFIEGVDAGMKHARNLFVANAAQ 181 Query: 181 TQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANSS 236 + + A++G ++L+ G + +P D I++F Y ++ S + Sbjct: 182 DKIG-VALAKTGEFKTSPNGDRYVLLDKGRRYEGTPGQLDYRIVEFDRYGVKVASKPPQA 240 Query: 237 TIVLKANDQNLSFLL-NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA-D 294 L + + LL NP P N E R+ L + F LI+I A Sbjct: 241 DANLPTKSRPTTELLANPTPENMG-----------ELVWRIGLPLLALNFVLIAIPLAYV 289 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 L R I + I L+ S + +++ ++L F + + Sbjct: 290 NPRLGRYTPMIFAVLIYLTYSNLLNLSQAWVAQGKMNAMLAWWPIHLAAFVCAMLLFRFR 349 Query: 355 K 355 Sbjct: 350 H 350 >gi|121605070|ref|YP_982399.1| permease [Polaromonas naphthalenivorans CJ2] gi|120594039|gb|ABM37478.1| permease YjgP/YjgQ family protein [Polaromonas naphthalenivorans CJ2] Length = 373 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 55/337 (16%), Positives = 123/337 (36%), Gaps = 25/337 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ I + + R+F + + ++ I I +++ + S + S ++ Y LP Sbjct: 2 LFQSSIRKELARAFGATLVVLITIVMTIVLIRTLGQASRGSISPQDVMLYMAYSGLGRLP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + + + LT M R++E+++ +G ++P+ A + + + + + Sbjct: 62 TILTISLFIAMVSTLTRMYRDSEMVVWFTSGQGLAGFLRPLFHFAWPVLLVITLMALFVW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTL--QGIFIVDSRD 180 P K + ++ Q + +F + + +FI + + Sbjct: 122 PWTNQQTKDMQSRYQQRGDLDRITPGVFQESSSGNRVFFIDRDLAGEKASTNVFIA-ATE 180 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT-ESANSST 237 I AQSG I+ D + ++L++G+ + I FK Y ++T +S Sbjct: 181 KGKSSITTAQSGRIESRGDARFLMLSNGQRLENDLEKSALKISDFKEYGVKTNDSGLLGE 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +A + L+ + + E RL L F +++ A + Sbjct: 241 SAPEAKLLSTRALI----------KDPTRSNLGELAWRLGLALSAFNFVFLAVALA--KV 288 Query: 298 LVRQRKKIHPIFISLSIS-------FGVFWGFSYIIH 327 R + + +F+ L+ G W F +I Sbjct: 289 NPRGGRSGNMMFVVLAFVVYNNLVNLGQSWIFVGLIS 325 >gi|153808346|ref|ZP_01961014.1| hypothetical protein BACCAC_02640 [Bacteroides caccae ATCC 43185] gi|149129249|gb|EDM20465.1| hypothetical protein BACCAC_02640 [Bacteroides caccae ATCC 43185] Length = 638 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 43/266 (16%), Positives = 107/266 (40%), Gaps = 22/266 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K +++I++ F+ + +FI + + + ++ + ++++ + Y T+ Sbjct: 10 IKKLDIFIVKSFMMLFVGTFFICLFIFMMQFLWRYVDELVGKGLEMSVMAQFFFYSALTL 69 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+ P + + + ELL + G S + +++P++F L F +N+ Sbjct: 70 VPVSLPLAVLLASLITFGNFGERYELLAMKAAGISLLKIMRPLVFFVCGLVGISFYFQNV 129 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 + P ++ + L + + E +F+ D +KI+K N L + I D + Sbjct: 130 VGPIAQAKLGTLILSMKQKSPELDIPEGVFYSEIPDYNLKIAKKNRKTGMLYDVLIYDLK 189 Query: 180 DT-QTHKIYYAQSGSIDLDRQA----IILNDGEV---------------HRKSPISKDIS 219 + + ++ YA SG +++ + L G++ +R+ + + Sbjct: 190 EGFEKARVIYADSGRLEMTADKQHLWLHLYSGDLFENLKAQSMKSQNVPYRRESFREKHT 249 Query: 220 IMKFKSYTLQTESANSSTIVLKANDQ 245 I++F S + A D Sbjct: 250 IIEFDS-DFNMVDGDIMGRQSSAKDM 274 >gi|118594056|ref|ZP_01551403.1| permease YjgP/YjgQ [Methylophilales bacterium HTCC2181] gi|118439834|gb|EAV46461.1| permease YjgP/YjgQ [Methylophilales bacterium HTCC2181] Length = 372 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 51/366 (13%), Positives = 133/366 (36%), Gaps = 20/366 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ + R + + L + L + I + + + + + + + + + +P Sbjct: 2 LFKKSLTRELFFTSLSTILVLSGIVVAQRAVIVFRFAARGSIPNDAIDTVLVFNLLKHMP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + L+ +++E++I ++G +LIKP++ + I + I Sbjct: 62 LLLSLTVFITILITLSRWYKDSEMIIWFSSGLGLYSLIKPIILFCFPIIILIASLSLYIS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRL-DDDLYIKISKYNP-NNTLQGIFIVDSRD 180 P ++ + + + F ++ I ++ + ++ IFI ++ Sbjct: 122 PWAVQKAEEYKTGLKSRDEIATITPGTFKESKSNNRIFYIEGFSSLGSKVKNIFIQSMQN 181 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + I + I + + I+L +G + SK+ S F Y + E + + Sbjct: 182 GKLGVIVSNEGERIEDNNNNNYIVLKNGRRYEGIANSKEFSTTTFDEYGILMEKTPKNNL 241 Query: 239 VLKAN------DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + A L+ + N N +N + + +E R++ L + ++I Sbjct: 242 NVGAKAGIIEATPTLALIFNQNDSN-------RKQFLAELMWRISLPLSTIFLIFLAIP- 293 Query: 293 ADKRALVRQRKKIHPIFISLS-ISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 R + + I + + F G + + + P ++ L + L F Sbjct: 294 -LSFINNRTGRSFNMIVAVFIFVIYNNFLGIFQSLISVGKIPLWLGFLPVHLVFGLVAFY 352 Query: 352 LMIKKK 357 L+ ++ Sbjct: 353 LLHRRS 358 >gi|313203466|ref|YP_004042123.1| permease yjgp/yjgq family protein [Paludibacter propionicigenes WB4] gi|312442782|gb|ADQ79138.1| permease YjgP/YjgQ family protein [Paludibacter propionicigenes WB4] Length = 493 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 85/212 (40%), Gaps = 6/212 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K + YI + FLM+ L +FI + + + ++ + ++L + Y I +V Sbjct: 4 IKKIDSYIFKRFITQFLMTFLICIFILLMQFLWKHVSELIGKGVGWSVLAEFFIYAIFSV 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +PM P + + ++ N EL + G S +I+P++ + + F N Sbjct: 64 VPMALPLAILLASLMTFGNLGENFELTAMKAAGISLFRIIRPLIIFISFVCVGAFFFSNY 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P ++ + L + + F+ ++ I + ++ L+ + I + Sbjct: 124 VLPVAQTKLYTLVISLKQKSPELDIPTGEFYSGIPNVQIYVKDK-KDHILKNVMIYNFSG 182 Query: 181 T-QTHKIYYAQSGSIDLDRQA----IILNDGE 207 + ++ A SG + + L DGE Sbjct: 183 GFENAEVTVADSGKVQFTEDKKYIMLSLFDGE 214 Score = 37.6 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 43/111 (38%), Gaps = 4/111 (3%) Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 +S + N + + + E H++ T +IF I A A++R+ Sbjct: 348 MSETVEYNKTMIGSQVTYITKHEIERHRKFTLSFACLIFFFIG---APLGAIIRKGGLGM 404 Query: 307 PIFISLSISFGVFWGFSYIIHKIEQNPYYIP-ILYLFLFCISSIFLLMIKK 356 P+ IS+ + + + +++ + ++L F + I + + K Sbjct: 405 PVVISVIMFIIYYIIDNTGYKMVKEGLWLSYQGMWLSSFVLLPIGIFLTYK 455 >gi|56416250|ref|YP_153325.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197365173|ref|YP_002144810.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56130507|gb|AAV80013.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197096650|emb|CAR62265.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 366 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 53/357 (14%), Positives = 127/357 (35%), Gaps = 22/357 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ I ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMVLALFTGILAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + + + + + +F+ R Sbjct: 122 PWSSKHQDEVLAEAKATPGMAALAQGQFQQATNGSSVLFIESVDGSDFHDVFLAQIRPKG 181 Query: 183 T--HKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F++Y + Sbjct: 182 NARPSVVVADSGHLTQLRDGSQVVTLNKGTRFEGTALLRDFRITDFQNYQAIIGHQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L N + + R+E H R+T + L+ + Sbjct: 242 DPNDTDQMDMRTLWNTDND----------RARAELHWRITLVFTVFMMALMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RQ + +S+ + ++ F I I+ N + + ++ L + Sbjct: 290 NPRQGR-----VLSMLPAMLLYLLFFLIQTSIKSNGGKGKLDPVIWMWAVNLIYLAL 341 >gi|317494176|ref|ZP_07952592.1| inner membrane protein yjgP [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917949|gb|EFV39292.1| inner membrane protein yjgP [Enterobacteriaceae bacterium 9_2_54FAA] Length = 366 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 53/349 (15%), Positives = 130/349 (37%), Gaps = 25/349 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETFKSQIAILFILLLIFFCQKMVRILGAAVDGEIPTNLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E++++ G + LIK + LA + F ++ + Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEIVVMHACGLGKGVLIKTAMILAFITGAFALVNAFWVS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + + E F D Y+ + +F+ R Sbjct: 122 PWSSFHSDEVMAEAKANPGLASMVEGQFQPSKDGNYVLFVGDVKGKKFENVFLAQLRPNG 181 Query: 183 T--HKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 T + A +G ++ Q ++L+ G + + + +D I F +Y Sbjct: 182 TQRPSVVVADTGHMEGRPDGSQQVVLDTGTRYEGTALLRDFRITDFVNYEAVIGHQAVVL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 A+ + L + N + +R+EFH R+T + L+ + Sbjct: 242 NPSNADQAPMQALWDSNEKD----------FRAEFHWRITLVFSVFVMALMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFL 343 RQ + +S+ + ++ F + + N P +++++ Sbjct: 290 NPRQGR-----VLSMLPAMLLYLIFFLLQSSLRSNAAKGKIDPFIWVWV 333 >gi|294055919|ref|YP_003549577.1| permease YjgP/YjgQ family protein [Coraliomargarita akajimensis DSM 45221] gi|293615252|gb|ADE55407.1| permease YjgP/YjgQ family protein [Coraliomargarita akajimensis DSM 45221] Length = 382 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 55/380 (14%), Positives = 137/380 (36%), Gaps = 27/380 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSST-ESLNILLKISGYLIPT 59 + ++ + I + L++ +F+ ++ + + ++ +K+ G LIP Sbjct: 2 LNLLHRHVFKEIAVAILLAMGLFIFVLLTGNAIRDVAALVAAGKLDAMTFIKLMGLLIPY 61 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 V P T L ++ E+ + + G S + PV F+A + + + Sbjct: 62 VAAYALPLGILTGTLMALGRLSSQREITAMKSAGLSLYQIASPVFFIAFIAMVLSLVVNL 121 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 P+ +S K++ A ++EE F I + ++ ++ ++ + Sbjct: 122 DFAPRAKSAFKEMLASTISENPVKFIEEKKFITGFPGYVIYMGDHD-GGLMKDFWVWELD 180 Query: 180 D-TQTHKIYYAQSGSIDLDRQA--IILN--DGEVHRKSPI------SKDISIMKFKSYTL 228 D Q + A+SG +D DR+A ++L + + +D+ + F+ Sbjct: 181 DRKQVTRFVRAESGELDYDREANELVLRVYNATAELRDDDAPETLLGEDLQTIFFQETEF 240 Query: 229 QTES----ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWL---- 280 T +K + N + L+ + E S +R+ + Sbjct: 241 ALPLERLFGQQKTRHVKIKNMNFAQLMEVREAALQAEAQSEEPGIS--KQRMQAQVQIQK 298 Query: 281 -FPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN---PYYI 336 + F S+ ++ +K +++++ + + F I+ ++ Sbjct: 299 NCAMAFSTFSLALFGVPLAIQVGRKESYANLAIALIIAMTYYFLMIVVSWMEDRIELRPD 358 Query: 337 PILYLFLFCISSIFLLMIKK 356 +++L I L +I++ Sbjct: 359 LLIWLPNILFQGIGLYLIRR 378 >gi|159030859|emb|CAO88538.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 387 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 39/361 (10%), Positives = 116/361 (32%), Gaps = 27/361 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y++ + FL S + + + N V + L L+I +P + Sbjct: 16 LIDRYLISQLLPPFLFSVGLFASLGVAISNLSDLANQVVDANLPLASALEILLLKVPEFV 75 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + T ++ ++E + + + G + L P L++++++ F+ + Sbjct: 76 TYSLPVSLLLATLITYGRLSSDSETVALQSCGVTLYRLFIPTFCLSLIVTVVTFLLNEYV 135 Query: 122 EPKCRSTIKQLSAK--------------AQLALTFSYLEENLFFRLDDDLYIKISKYNPN 167 P ++ + LE R L +++ Sbjct: 136 VPNANYRATEILVQKINKEANFWKNKDFYYPDYEIKTLENGTINRNLRSL-FYAEQFD-G 193 Query: 168 NTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIM---KFK 224 ++ + ++ + ++I A S + +G ++ +P + S + K + Sbjct: 194 EKMKTVTVIRWLKEELNQIIIADSARWNAVDNVWDFFNGIIYELTPPNASYSQVIPFKTE 253 Query: 225 SYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNY-RPELLETYRSEFHKRLTQWLFPV 283 L + + + + N+ + + + ++ +++ + Sbjct: 254 KIALSRSAFDFARQSRDPYEMNIPQAIEYVQLLKLSGDEKRVRFFQVRIQQKIAFPFVCI 313 Query: 284 IFGLISIVAADKRALVRQRKKIHPIFISLSISFG-VFWGFSYIIHKIEQNPYYIPILYLF 342 +F I + LS++ +++ ++++ + P L + Sbjct: 314 VFATIGCALGSLPQ-----RISRGTSFGLSVAIVFLYYLLNFLVGSLGLTATLSPFLAAW 368 Query: 343 L 343 L Sbjct: 369 L 369 >gi|121730353|ref|ZP_01682711.1| bifunctional aspartokinase/homoserine dehydrogenase I (AKI-HDI) [Vibrio cholerae V52] gi|121627894|gb|EAX60475.1| bifunctional aspartokinase/homoserine dehydrogenase I (AKI-HDI) [Vibrio cholerae V52] Length = 233 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 87/230 (37%), Gaps = 5/230 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + ++ + VS +++L I G +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADVSDGEIPTSMILSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LA++ + + + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RD 180 P + L + + L++ F R D + N L +F+ RD Sbjct: 122 PWSQDKEAHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLYNVFVAQLAPRD 181 Query: 181 TQTHKIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 + + ++ SG + RQ I L DG + P D I F SY Sbjct: 182 SILPSVMFSHSGDVKELSDGRQIITLYDGTRYEGVPTRVDYMITNFDSYD 231 >gi|283786943|ref|YP_003366808.1| permease [Citrobacter rodentium ICC168] gi|282950397|emb|CBG90045.1| putative permease [Citrobacter rodentium ICC168] Length = 366 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 54/364 (14%), Positives = 133/364 (36%), Gaps = 25/364 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ LIK + LA+ I ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLIKAAMILALFTGIIAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + + + + + + +F+ R Sbjct: 122 PWSSKHQDEVLAEAKANPGMAALAQGQFQQASNGSSVLFIESVDGSDFKDVFLAQIRPKG 181 Query: 183 T--HKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F++Y + Sbjct: 182 NARPSVVVADSGHLTQLRDGSQVVTLNKGTRFEGTALLRDFRITDFQNYQAIIGHQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L + + R+E H R+T + L+ + Sbjct: 242 DPNDTDQMDMRTLWTTD----------TDRARAELHWRITLIFTVFMMALMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFLFCISSIFLLMI 354 RQ + +S+ + ++ F I ++ N P+++++L + + L + Sbjct: 290 NPRQGR-----VLSMLPAMLLYLMFFLIQTSLKSNGGKGKLDPVIWMWLVNLLYLALAIG 344 Query: 355 KKKY 358 + Sbjct: 345 LNLW 348 >gi|313895766|ref|ZP_07829321.1| permease, YjgP/YjgQ family [Selenomonas sp. oral taxon 137 str. F0430] gi|312975595|gb|EFR41055.1| permease, YjgP/YjgQ family [Selenomonas sp. oral taxon 137 str. F0430] Length = 366 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 48/375 (12%), Positives = 133/375 (35%), Gaps = 30/375 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPT 59 ++ + YI R + SFL + + + + ++ SL ++KI + +P Sbjct: 5 IRILDKYIFREVFVSFLFAICAFSAVFIGSGTLFRIAQYITDYGASLPSVIKIFVFSLPG 64 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 V+ P + + ++ +E+ + + G + + P + L ++S+ + Sbjct: 65 VVMWTFPMSMLLASLLTFGKLSSASEITAMKSCGINFTRIAAPAVLLGFVVSVGAILFNE 124 Query: 120 IIEPKCRSTIKQLSA---------KAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NT 169 + P+ + + + K+Q + + + RL + Y+ Sbjct: 125 YVVPRANTAYRNVIYYEIEGNSGMKSQEHVIIKEITDGQIRRL-----VYARAYDAEQQR 179 Query: 170 LQGIFIV-DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 L + + D + + A+ + + I++ G+V+ + + M+F++ L Sbjct: 180 LTNVSLQVFGDDGKVSHVENAE--YAEWTGKEWIMHSGDVYDIADEHME-RHMRFETQVL 236 Query: 229 QTESANSSTIVLK--ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFG 286 + I + + + L + +E ++R++ + +IF Sbjct: 237 PVQKDPRQIIREQKSPEEMTMRELRRQ-IALMQTQYVNTNKLEAELYQRVSVPMASLIFT 295 Query: 287 LISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF---L 343 LI + + R + I F ++ + + + P+L ++ + Sbjct: 296 LIGVPLGIQP--TRNSSSAGFAMSVIIIFF--YYALMTMGNAFARGGVLPPMLAVWIPNI 351 Query: 344 FCISSIFLLMIKKKY 358 I + +L + + Sbjct: 352 VGIIAGAILFRRASH 366 >gi|320530395|ref|ZP_08031454.1| hypothetical protein HMPREF9555_01558 [Selenomonas artemidis F0399] gi|320137359|gb|EFW29282.1| hypothetical protein HMPREF9555_01558 [Selenomonas artemidis F0399] Length = 369 Score = 133 bits (334), Expect = 6e-29, Method: Composition-based stats. Identities = 48/375 (12%), Positives = 133/375 (35%), Gaps = 30/375 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPT 59 ++ + YI R + SFL + + + + ++ SL ++KI + +P Sbjct: 8 IRILDKYIFREVFVSFLFAICAFSAVFIGSGTLFRIAQYITDYGASLPSVIKIFVFSLPG 67 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 V+ P + + ++ +E+ + + G + + P + L ++S+ + Sbjct: 68 VVMWTFPMSMLLASLLTFGKLSSASEITAMKSCGINFTRIAAPAVLLGFVVSVGAILFNE 127 Query: 120 IIEPKCRSTIKQLSA---------KAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NT 169 + P+ + + + K+Q + + + RL + Y+ Sbjct: 128 YVVPRANTAYRNVIYYEIEGNSGMKSQEHVIIKEITDGQIRRL-----VYARAYDAEQQR 182 Query: 170 LQGIFIV-DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 L + + D + + A+ + + I++ G+V+ + + M+F++ L Sbjct: 183 LTNVSLQVFGDDGKVSHVENAE--YAEWTGKEWIMHSGDVYDIADEHME-RHMRFETQVL 239 Query: 229 QTESANSSTIVLK--ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFG 286 + I + + + L + +E ++R++ + +IF Sbjct: 240 PVQKDPRQIIREQKSPEEMTMRELRRQ-IALMQTQYVNTNKLEAELYQRVSVPMASLIFT 298 Query: 287 LISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF---L 343 LI + + R + I F ++ + + + P+L ++ + Sbjct: 299 LIGVPLGIQP--TRNSSSAGFAMSVIIIFF--YYALMTMGNAFARGGVLPPMLAVWIPNI 354 Query: 344 FCISSIFLLMIKKKY 358 I + +L + + Sbjct: 355 VGIIAGAILFRRASH 369 >gi|85709344|ref|ZP_01040409.1| predicted permease [Erythrobacter sp. NAP1] gi|85688054|gb|EAQ28058.1| predicted permease [Erythrobacter sp. NAP1] Length = 417 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 56/363 (15%), Positives = 128/363 (35%), Gaps = 13/363 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 S + YI R + L + + ++L+ + V+ + ++ K+ G LIP Sbjct: 7 SIDRYIFRLVIVPMLGVFALAASLLLLDKMLRLFDFVAVEGGPIGVVFKMLGALIPEYAS 66 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + + ++EL + G S L++ + ++L I+ Sbjct: 67 LAIPLGLLLGVLLAFRKLATSSELDTMRAVGLSYWRLLRVPYAITLVLVAVNIALVFYIQ 126 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSRDT 181 P R +Q+ + + + ++ F L D + ++I + + L GIF S Sbjct: 127 PVSRYYYEQMEYELRSGALGASIKVGEFTTLADRMALRIERSEDDGQRLIGIFARVSNSR 186 Query: 182 QTHKIYYAQSGSI-----DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 A+ GS D D + L +G + + S+ ++ F + L + Sbjct: 187 DQVLSISAREGSFMATTDDPDTIILRLTEGTIVQ-DTGSETPRVLSFSRHDLPIDLPAVE 245 Query: 237 TIVLK---ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + + + L LL + E + ++ F+ R + + ++ L+++ A Sbjct: 246 EFRARGEASREYILPELLRIGWSEQAEEDE-RDAVQAAFNYRTVEVVMMLLMPLLAVALA 304 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + I + + I +P I L+ +++ + M Sbjct: 305 IPPKRSTSALGVFVSIILVVAYHKINQYGEDIAALGRIDP--IIALWGPFCAFAALIIWM 362 Query: 354 IKK 356 + Sbjct: 363 YYR 365 >gi|254491489|ref|ZP_05104668.1| putative permease, YjgP/YjgQ family [Methylophaga thiooxidans DMS010] gi|224462967|gb|EEF79237.1| putative permease, YjgP/YjgQ family [Methylophaga thiooxydans DMS010] Length = 344 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 42/294 (14%), Positives = 109/294 (37%), Gaps = 19/294 (6%) Query: 25 FIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNT 84 I + + + + +++ + G L ++ P + L M+ + Sbjct: 3 LIYISTRFARYLADAAVGNMPADVIFSLLGLSSLGALSILLPIGAFLAVMLTLGRMSSDN 62 Query: 85 ELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSY 144 EL ++ G S +++ V+ + +++ + + + P S +L +A+++ + Sbjct: 63 ELTVMAACGISTSRVMRNVMLFSGTIALMVAVLSLFVVPDVMSDRYELQTRAKMSANTTG 122 Query: 145 LEENLFFRLDDD-LYIKISKYNPNNT-LQGIFIVDSRDTQTHKIYYAQSGSIDLD----R 198 L F D + N ++ +FI + I+ +++G ++D Sbjct: 123 LIAGSFKESGDGDWTFYSEGLSANKQFMENVFI-EIEGKDKPLIFRSETGHFEIDAVTGN 181 Query: 199 QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNP 258 + ++L G + + +D +I +F S++L E ++ + + LL Sbjct: 182 KFLVLEKGYRYEGNAGDQDFTIAQFASHSLLVEKGDAGEVRERHKAMPTGELL------- 234 Query: 259 NYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISL 312 +E R + L ++ L+++ A+ RQ + + L Sbjct: 235 ---ERGSARDIAEVQWRTSAALMTLLLCLMAMPLANAGP--RQGRYAGFVPAVL 283 >gi|34763639|ref|ZP_00144568.1| Hypothetical Membrane Spanning Protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|294785395|ref|ZP_06750683.1| permease, YjgP/YjgQ family [Fusobacterium sp. 3_1_27] gi|27886692|gb|EAA23836.1| Hypothetical Membrane Spanning Protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|294487109|gb|EFG34471.1| permease, YjgP/YjgQ family [Fusobacterium sp. 3_1_27] Length = 359 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 54/331 (16%), Positives = 121/331 (36%), Gaps = 10/331 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YIL + +++ FI + ++ + + S+ +L++ + IP + Sbjct: 1 MKIINKYILDELKGPIILAVFVFTFIFLLDIVVTMMEHIIVKGISVFDVLRLLSFYIPPI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + T +RN+E + + +TG S ++KP+L +AI SIF+ + Sbjct: 61 LTQTIPIGMFLGIMICFTKFSRNSESVAMVSTGMSIRDILKPILAIAIGASIFIIFLQES 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P+ +K + AK L+E F D+ I + K + + + I + + Sbjct: 121 IIPRSFIKLKYVGAKIAYENPVFQLKEKTFIDNLDEYSIYVDKVSSDGKAKNIIAFEKPE 180 Query: 181 TQT--HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 + + + AIIL + + K + F + + + + Sbjct: 181 DKNKFPMVLTGEEAFWK--DSAIILKESQFVSFDETGKKNLVGTFDEKKVVLTAYFQDLN 238 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI-VAADK 295 + +++ L+ + Y+ E ++L + +I ++ Sbjct: 239 IKIKDVEALSITDLI---KGIKKVEATEVIKYKIEIFRKLALVFSTIPLAVIGFCLSLGH 295 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYII 326 + ++ I + I + + G Sbjct: 296 HRISKKYSFILAMIIVFAYIIFLNIGIVMAT 326 >gi|254303140|ref|ZP_04970498.1| possible ABC superfamily ATP binding cassette transporter membrane protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323332|gb|EDK88582.1| possible ABC superfamily ATP binding cassette transporter membrane protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 359 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 59/344 (17%), Positives = 122/344 (35%), Gaps = 9/344 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YIL + +++ FI + ++ + + S+ +L++ + IP + Sbjct: 1 MKIINKYILDELKGPIILAVFVFTFIFLLDIVVTMMEHIIVKGISVFDVLRLLSFYIPPI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + T +RN+E + + +TG S ++KP+L +AI SIF+ + Sbjct: 61 LTQTIPIGMFLGIMICFTKFSRNSESVAMVSTGMSIRDILKPILAIAIGASIFIIFLQES 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD--S 178 I P+ +K + AK L+E F D+ I + + + + + I + Sbjct: 121 IIPRSFIKLKYVGAKIAYENPVFQLKEKTFIDNLDEYSIYVDEVDSDGKAKNIIAFEKPE 180 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 ++ + + + +IIL + + K + F + + + Sbjct: 181 DKSKFPMVLTGEEAFWKDN--SIILKESQFVSFDETGKKNLVGTFDEKRVVLTAY-FQDL 237 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 +K D +++ Y+ E ++L V +I +L Sbjct: 238 NIKIKDVEALSIIDLIKGLKKVEATEAIRYKIEIFRKLALVFSTVPLAVIGFCL----SL 293 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 R FI I + F I + P + + Sbjct: 294 GHHRISKKYSFILAMIIIFAYIIFLNIGIVMATAGKLNPFIATW 337 >gi|54295469|ref|YP_127884.1| hypothetical protein lpl2555 [Legionella pneumophila str. Lens] gi|53755301|emb|CAH16795.1| hypothetical protein lpl2555 [Legionella pneumophila str. Lens] Length = 359 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 52/373 (13%), Positives = 136/373 (36%), Gaps = 30/373 (8%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + + + +V I Q +Q +N +S + +++K+ +P ++ Sbjct: 2 IIFRYLTKEVFLTLIALTAILVLIFMSNQFIQYLNRAASGSIPGFVIMKLLMLELPNLMG 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + + +E+ ++ G L+K +A ++ + + I Sbjct: 62 LLLPLGFYIALLLAYGRLYAESEMTVLRACGYGPRQLLKHSFAMATVVLVVVAIVVIWAS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNT-LQGIFIVD--- 177 P +L + + F ++ + N +++ + IF+ Sbjct: 122 PVIAVERTKLIRSTGIKTLIQTIMPGRFHAINSGQQIFYVQSMNRDHSQAEQIFMAKHSV 181 Query: 178 SRDTQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 + + +A +++ Q I+L +G+ ++ P D I +F SY + + Sbjct: 182 QDNKLLWDVLWADKAFAEVNPQTGEEYIVLQNGKEYQGVPGHADYQIAEFASYKSKLPNP 241 Query: 234 NS--STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 A ++L L N + +E R++ L + L+++ Sbjct: 242 TVVMHDDARTAKTRDLWPLNNHDLKK-----------AAELQWRISIPLMVLTLTLVAVP 290 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI---EQNPYYIPILYLFLFCISS 348 R R K + + F + F ++ + P++I + ++ + ++ Sbjct: 291 --LSRVSPRSGKYSKLLPAIIIYIF--YANFMFVSRDAIATGKIPWWIGMWWVHV-AVAI 345 Query: 349 IFLLMIKKKYTKI 361 + +L I + K+ Sbjct: 346 LGILFIWRNQVKL 358 >gi|52425604|ref|YP_088741.1| hypothetical protein MS1549 [Mannheimia succiniciproducens MBEL55E] gi|52307656|gb|AAU38156.1| unknown [Mannheimia succiniciproducens MBEL55E] Length = 366 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 129/357 (36%), Gaps = 24/357 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + +S + ++ I + Q+++ + ++ +++L + G +P + Sbjct: 2 ILTRYLTKEVFKSQVAILFILLLIFFSQQLVRVLGSAANGNVPADLVLSLLGLGMPAMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P C + + +E+ ++ G + L+K L L++L + + + Sbjct: 62 LMLPLCLFIAILLTFGRLYAESEISVMRACGVGQRILVKVALGLSVLTAALAAYNVLWVS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIKISKYNPNNTLQGIFIVDSRDT 181 P Q+ A+ S L F +D D + I +N + I++ +++ Sbjct: 122 PWAIQKQGQIVEDARANPNMSALSAGQFMTSNDSDFVLFIDNI-KDNKISNIYLFQTKEK 180 Query: 182 QT--HKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + A++G + Q + L + + S D I F Y N Sbjct: 181 GNSKPSVIVAENGELQSLPNGDQILSLQNSQRVEGSAALPDFRITNFTEYQAYLGHRN-- 238 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + +++ + L ++E + R++ L L++++A Sbjct: 239 ---VDSDENETTELPL-----AELLALKTPAAKAELNWRISLIL---AVPLMALLAVPLS 287 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIE----QNPYYIPILYLFLFCISSI 349 + ++ + I +L + F S + +P++ LF + + Sbjct: 288 KVNPRQGRFAKILPALLLYLIYFLLQSSLKSAGGAGKLDAGLLMPLVNLFFLLLGIM 344 >gi|332290237|ref|YP_004421089.1| putative permease YjgP/YjgQ family [Gallibacterium anatis UMN179] gi|330433133|gb|AEC18192.1| putative permease YjgP/YjgQ family [Gallibacterium anatis UMN179] Length = 363 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 60/368 (16%), Positives = 137/368 (37%), Gaps = 21/368 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ +S L ++ I Q+++ + + ++++L + G +PT+ Sbjct: 2 ILTKYLIKETLKSQLAILFILLVIFLAQQLVRVLGSAVNGNVPVDVILPLLGLGMPTMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G L+K L L+I+ + + + Sbjct: 62 LMLPLSLFLALLLTLGRLYSESEITVMQACGIGPNALVKVGLILSIVTAAIAAYNSLYLT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+ + S + F ++ ++ + L I++ +R Sbjct: 122 PWALKKQVEVVENAKANPSASAITPGQFISSNNGNFVLFVDKVKGDQLSDIYLFQTRQVG 181 Query: 183 --THKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G+ + Q + L +GE S + + + F+ Y + Sbjct: 182 KVKPSVIVAEQGNFSTAKDGSQTLALKNGERFEGSAVLPEFRVTHFQDYLAFLAFNPAKA 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + Q+ + LL + N ++E R++ +L + LI+I + Sbjct: 242 EEADLDMQDSNALLKNSSANA----------KAELQWRISLFLAVPLMMLIAIP--LSKV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSY----IIHKIEQNPYYIPILYLFLFCISSIFLLM 353 RQ + I L S I KIE + + I + LFL + Sbjct: 290 NPRQGRFAKIIPALLLYLIYFLLQSSLKTAGINGKIESHYWMILVNMLFLLLGIILNSAT 349 Query: 354 IKKKYTKI 361 I+ K+T++ Sbjct: 350 IQSKFTQL 357 >gi|254432417|ref|ZP_05046120.1| unclassified ABC-type transport system permease [Cyanobium sp. PCC 7001] gi|197626870|gb|EDY39429.1| unclassified ABC-type transport system permease [Cyanobium sp. PCC 7001] Length = 386 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 49/370 (13%), Positives = 126/370 (34%), Gaps = 18/370 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQIL-QRINLVSSSTESLNILLKISGYLIPTVL 61 + ++L + + ++ + + + + V+ S L++ L++ +P+ L Sbjct: 14 LLDRWMLGELIGPLVFGVAAFTAVSLSVGAVFELVRRVAESGLPLDVALQVLLLELPSFL 73 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P M T + ++ N+EL + + G ++ P + LA+ +++ F + Sbjct: 74 VLSFPMATLMATLLTYSKLSGNSELTALRSVGVPTWRMLVPAVVLAVAMTMLTFGFNEAV 133 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLF------FRLDDDLY------IKISKYNPNNT 169 P S + ++A +N+ L D I ++ Sbjct: 134 VPSTLSQAEATLSRAIGRAVAGEQRDNVVYSKYGRVELPDGSTERGLTHIFYAQRFNKGV 193 Query: 170 LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVH-RKSPISKDISIMKFKSYTL 228 ++ + ++D + + A DG+V S S+ I+ +F Y Sbjct: 194 MEDVTLLDLSRSAHRVMLTADRARWSSRDAQWEFLDGQVVGIGSSGSEAITSARFDRYLY 253 Query: 229 QTESANS--STIVLKANDQNLSFLLNPNP-NNPNYRPELLETYRSEFHKRLTQWLFPVIF 285 + + + AN+ ++ + R ++ + ++F Sbjct: 254 PLGNQPLKVAKLPKDANEMSIGQARTAERLLRESGDLRAARKLRVRIQEKFSFPAVCLVF 313 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC 345 GLI + R R+ + L I FS+ ++ + ++ + Sbjct: 314 GLIG-SSLGARPHSRRSRSQGFGLTVLLIFGYYLVAFSFSSLGVKGTLTPLLSAWMPVLI 372 Query: 346 ISSIFLLMIK 355 L++++ Sbjct: 373 GLGTGLVLVR 382 >gi|158337167|ref|YP_001518342.1| YjgP/YjgQ family membrane protein [Acaryochloris marina MBIC11017] gi|158307408|gb|ABW29025.1| membrane protein, YjgP/YjgQ family, putative [Acaryochloris marina MBIC11017] Length = 383 Score = 132 bits (333), Expect = 8e-29, Method: Composition-based stats. Identities = 53/358 (14%), Positives = 130/358 (36%), Gaps = 13/358 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPT 59 + + +ILR ++ + I + + + ++ T S L++ +P Sbjct: 17 ISRLDRFILRAFWMPWVFAFGAFTTISFSIGALFDTLRRLTEGTLSSVDALQVLVLQLPR 76 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + + P + + + R EL+ + GTS +I+P L ++++++ Sbjct: 77 FMVLALPMSMLLAPLLTYSQLARKNELIALKACGTSVYRVIRPALCFSLIVAVSTLTLNE 136 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLD--DDLY--IKISKYNPNNTLQGIFI 175 I P + + +L A+ ++ + +N+ + L ++ L + I Sbjct: 137 WIVPPATAAVHRLQAQQTVSQITAIPRQNIVHQTYHHQRLTQLFHARAFD-GEALHQLTI 195 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDI-SIMKFKSYTL-QTESA 233 + +D H I+ A+ D Q IL+ G + P+S ++ FK + Q Sbjct: 196 LQFQDRHLHHIWLAKQAIWDSTHQQWILSQGTRYTIDPVSGLYQQVVPFKRHPFHQVSPQ 255 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + + + + + L P L + + +H + V F L+ + Sbjct: 256 ELAEVAHQPISLHETQALIQQIKQSGNLPTL-QRLQVRWHALMAFPWIGVGFTLMG-SSL 313 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 ++ +Q + L ++ FS+I + + + +L + + + Sbjct: 314 GCQSTSKQGSLGFGLSSLLIFG---YYTFSFICQTLGDAGIWSASIAGWLPIVVLLTI 368 >gi|255034852|ref|YP_003085473.1| permease YjgP/YjgQ family protein [Dyadobacter fermentans DSM 18053] gi|254947608|gb|ACT92308.1| permease YjgP/YjgQ family protein [Dyadobacter fermentans DSM 18053] Length = 498 Score = 132 bits (333), Expect = 8e-29, Method: Composition-based stats. Identities = 41/227 (18%), Positives = 87/227 (38%), Gaps = 8/227 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + IL F+++ +VF+ + ++ I+ S ++ ++ + Sbjct: 1 MKKLDKLILTSFWGPFVITMSVVVFVFLMRIMIFYIDDFVSKDLNVMDYAQLFFFFSLIT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P P + + ++ EL I + G S + + P+ +A+ +S+F F + Sbjct: 61 VPTALPLAMLLSSLMAFGNLGEFFELTAIKSAGISVVRAMAPLFIVAVGISVFSFYFNDR 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD--- 177 + P L + ++E +F+ IK+ + N + G+ I Sbjct: 121 VSPWANLKGYSLLYDIKTTKATLKIKEGIFYNDLPGYSIKVDEKLENGKMTGMVIYKHNS 180 Query: 178 -SRDTQTHKIYYAQSGS---IDLDRQAII-LNDGEVHRKSPISKDIS 219 S + +I A SG I+ +R +I L +G + S Sbjct: 181 RSYEFGNTEIILADSGRMYSINENRYLVIELYNGTRYTDEQGSASSR 227 >gi|158337152|ref|YP_001518327.1| permease YjgP/YjgQ [Acaryochloris marina MBIC11017] gi|158307393|gb|ABW29010.1| permease YjgP/YjgQ, putative [Acaryochloris marina MBIC11017] Length = 390 Score = 132 bits (333), Expect = 8e-29, Method: Composition-based stats. Identities = 61/367 (16%), Positives = 127/367 (34%), Gaps = 17/367 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPT 59 + + Y+ R + FL + I + + VS + + I L I +P Sbjct: 13 LALVDRYLFRQLLPPFLWGMVAFSSIGVSAAVLFDLLGQVSEARLPIAIALSILTLQLPY 72 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + + P + L+ + + ELL + + G LI L ++L +F+F Sbjct: 73 FVSLAIPMSVLLACLLTLSRLQSDGELLALQSAGLHLNRLIGSCLGFSLLACLFMFGLTE 132 Query: 120 IIEP----KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI 175 + P ++Q Q +L ++ + + ++ TL GI + Sbjct: 133 SLVPVSQAHSHHLLRQTLQAGQFSLQGRHIVYPDIGPNQELRRLFYAQTGQGQTLSGITV 192 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA-N 234 +D ++ AQS + + +R I DG ++ + I++F LQ + Sbjct: 193 IDWTLPNNQQVLIAQSATWNAERNIWIFKDGSIYAIGTDGAEKHIIEFSKQELQLPPQLS 252 Query: 235 SSTIVLKANDQNL---SFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 + + N L LL RP + + H+++ +IF +V Sbjct: 253 LTDSDINPNGVTLAQSQQLLTKLRQTG--RPTQIRALAIQIHRKIALPFTVIIF---GLV 307 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYI---IHKIEQNPYYIPILYLFLFCISS 348 + R+ + ISL + G + +P++ + + Sbjct: 308 GSTLGISQRRLAVSNGFGISLILVLGQYILIFIADAWGQLGIISPWFGAWTPNLVTGLIG 367 Query: 349 IFLLMIK 355 + LL+ Sbjct: 368 VSLLLRP 374 >gi|116074701|ref|ZP_01471962.1| possible permease [Synechococcus sp. RS9916] gi|116067923|gb|EAU73676.1| possible permease [Synechococcus sp. RS9916] Length = 389 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 52/377 (13%), Positives = 133/377 (35%), Gaps = 24/377 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + +++ + + + ++ V + + + + S + I L++ +P+ L Sbjct: 18 LLDRWLISELVGPLIFAIAAFTVVSLSVGVMFELVRKIVESGLPVLIALQVLLLRLPSFL 77 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P M T + ++ N+EL + + G + +I P L L+++++ F+ ++I Sbjct: 78 VISFPMATLMATLLAYSRLSANSELTALRSVGVTARRMIAPALALSLVMTTLTFVFNDVI 137 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLY--------------IKISKYNPN 167 P+ + +A + +++ + L ++ Sbjct: 138 VPRANRNAEVTLQRALGKAIATEKGDDIVYSRFGRLAGADEGDRTRGLAQLFYAREFRK- 196 Query: 168 NTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 T+QG+ ++D ++ A + +G+ +P I+ +F Y Sbjct: 197 GTMQGVTLLDFSRVGFTQMLVADEAKWNDKEGKWEFLNGQSVTLTPEGGTIT-AQFDRYL 255 Query: 228 LQTESANSSTIVLKANDQNLSFLLNPNPNNPNY---RPELLETYRSEFHKRLTQWLFPVI 284 +A L + N++ L + R ++ T + ++ Sbjct: 256 YPLSAAPVRIAKLPKDANNMTVLEAVEAEQLLRDAGDRKEARRLRVRIQEKFTLPMACLV 315 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF-L 343 FGLI K R + I + L + V++ S+ + P+L + Sbjct: 316 FGLIGSSLGAKPNNRTSRSQGFGISVVLIL---VYYVLSFSFSSLGVKGTLPPLLAAWMP 372 Query: 344 FCISSIFLLMIKKKYTK 360 IS + ++ ++ Sbjct: 373 VLISLAGGWTLLRQASR 389 >gi|171913020|ref|ZP_02928490.1| permease YjgP/YjgQ family protein [Verrucomicrobium spinosum DSM 4136] Length = 385 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 59/388 (15%), Positives = 136/388 (35%), Gaps = 36/388 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSST--ESLNILLKISGYLIP 58 ++ F+ YI R + S L L + + + + + + + T L + + Y+IP Sbjct: 3 LRIFDRYIWRQVSSSTLTGVLVLTGVMVLGNVFKEMERLLGDTASLPLMAVAQFITYVIP 62 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 L P+ V M+ + E+ + TG S + V L+I +S ++ Sbjct: 63 YSLIFTIPWALLTAILLVFGRMSADNEMTALRMTGMSMPRICAAVFALSIFMSGVCYLVN 122 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 + P ++ IK+L L + I + N L+ + I+ + Sbjct: 123 VELAPLAKTKIKRLFYDLALDDPAVLFQPGKVLDRFPGYRIFTQERE-GNKLKNVEIIQT 181 Query: 179 RDTQTHKIYYAQSGSIDLDRQ----AIILNDGEVHRKSPI------SKDISI---MKF-- 223 + + A+ + + + L + V +++I ++F Sbjct: 182 NLGRAERYIRAKRAEVVVTPGVTDFQLHLRNATVETGGGEADAASAGGEVNIMNDLQFLY 241 Query: 224 ---KSYTLQTESANSSTIVLKANDQNLSFLLNP------NPNNPNYRPELLETYRSEFHK 274 + T T + ++ ++ S L + + + +L+ R+E Sbjct: 242 MGDTAITFPLSKLKEKTERVTSSMKDTSALWSEVNTGISSVDGQPLSEKLISVSRTELSM 301 Query: 275 RLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY 334 R + L ++F L+ I + QR++ F I + F ++ + + P Sbjct: 302 RYSFSLAAIVFTLVGIPLG----ITAQRRETSIGFALSLIVAVSYMVFVIFVNGLNERPS 357 Query: 335 YIP--ILY---LFLFCISSIFLLMIKKK 357 P +++ L + S + ++ Sbjct: 358 VYPHLLMWIPNLIFIGVGSRMFYKLNRR 385 >gi|332662936|ref|YP_004445724.1| permease YjgP/YjgQ family protein [Haliscomenobacter hydrossis DSM 1100] gi|332331750|gb|AEE48851.1| permease YjgP/YjgQ family protein [Haliscomenobacter hydrossis DSM 1100] Length = 538 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 39/286 (13%), Positives = 99/286 (34%), Gaps = 12/286 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K + ++ F+++ +F+ + + I+ ++ ++++ Y + Sbjct: 10 LKRIDELVITSFIPPFIVAFSVSLFVLLMQMLWIYIDDLAGKGLGFFTVIELLSYRAVSF 69 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +PM P + + ++ + + EL + + G S + +++P+L +I F + + Sbjct: 70 VPMALPLGILLSSVMLMGNFAEHYELSSMKSAGLSLVRIMRPMLIFSIFTVAFSWYCSDY 129 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 + P Q L+ +F I I K + T++ + I D Sbjct: 130 LIPAANLKFGSRMWDIQQTKPALRLDVGVFNDDFQGFTIHIGKKMSDGRTIKDVIIYDHS 189 Query: 180 DTQTH--KIYYAQSGSIDLDRQAII----LNDGE--VHRKSPISKDISIMKFKSYTLQTE 231 + + + A+ G + I L +G + + S S F + Sbjct: 190 EANSGKYTVITAKDGEMFTSEDGNIFVMRLRNGYQCIESRGYQSSSQSKYPFIRTGFKQF 249 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRP--ELLETYRSEFHKR 275 + + + L + + R ++ + HKR Sbjct: 250 TKVFDLTEFSLS-RTNEELFKQSRQTMDSRALKAAADSMALDIHKR 294 >gi|224825295|ref|ZP_03698400.1| permease YjgP/YjgQ family protein [Lutiella nitroferrum 2002] gi|224602216|gb|EEG08394.1| permease YjgP/YjgQ family protein [Lutiella nitroferrum 2002] Length = 366 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 49/294 (16%), Positives = 111/294 (37%), Gaps = 15/294 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ + R + + + + ++ I Q + + + + + + G+ + P Sbjct: 2 VFQKSLTRELTFTAVSVFVVLLAILVTTQTINLLGRAAEGRIANEAVAALIGFWTLGLFP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT + R+ E+ + +G S +KPVL A+ L+I + IS +I Sbjct: 62 LLLILTVFISVLVVLTRLWRDHEMAVWLASGVSLKDWVKPVLRFAVPLAILVGISSLLIG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLF--FRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + + + S + +F +Y + N + IF+ D Sbjct: 122 PWAEQRSHEYAEILKQHEDVSAISPGIFKESHSSRRVYFVENFSGKNGSAANIFMQDMSK 181 Query: 181 TQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + +A+SG I + Q ++L +G + +P D + +F Y++ Sbjct: 182 GKVAS-IFAKSGRIVTNEQGERLLLLENGRRYVGNPGEADYEVAEFARYSVVINDQPQFI 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 + S L + + ++E R++ + V+ L++I Sbjct: 241 PSGNSRQTMTSAALALSDKAGD---------KAELGWRVSMPISTVVLALLAIP 285 >gi|261342656|ref|ZP_05970514.1| inner membrane protein YjgP [Enterobacter cancerogenus ATCC 35316] gi|288315304|gb|EFC54242.1| inner membrane protein YjgP [Enterobacter cancerogenus ATCC 35316] Length = 366 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 59/378 (15%), Positives = 136/378 (35%), Gaps = 37/378 (9%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVKILGAAVDGEIPTNLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ I ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMVLALFTGIIAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + D + + N +F+ R Sbjct: 122 PASSRHQDEVLAEAKANPGLAALAQGQFQQASDGNSVLFIESVDGNRFNDVFLAQLRPKG 181 Query: 183 T--HKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F++Y + Sbjct: 182 NARPSVVVADSGQLSQRKDGSQVVTLNKGTRFEGTAMLRDFRITDFQNYQAIVGHQTVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 N+ L+ + + R+E H R+T + L+ + Sbjct: 242 DPTDTEQMNMRTLIATDSD----------RARAELHWRITLVFTVFMMALMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-----------PYYIPILYLFLFCI 346 RQ + +S+ + ++ F + I+ N + + LYL L Sbjct: 290 NPRQGR-----VLSMLPAMLLYLVFFLLQTSIKSNGGKGKIDPAIWTWVVNGLYLLLAVG 344 Query: 347 SSIF----LLMIKKKYTK 360 +++ + I+ ++T+ Sbjct: 345 LNLWDTVPVRRIRARFTR 362 >gi|254521723|ref|ZP_05133778.1| permease YjgP/YjgQ family protein [Stenotrophomonas sp. SKA14] gi|219719314|gb|EED37839.1| permease YjgP/YjgQ family protein [Stenotrophomonas sp. SKA14] Length = 360 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 52/361 (14%), Positives = 131/361 (36%), Gaps = 18/361 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L +SFL + + ++ ++ ++ + ++ +L G Sbjct: 1 MLKLDRYLLGDFVQSFLATLIVLLVVSVGGVLVDILGNIADGRLPAKLLFSQLGLQFIAY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP++ P + + + R++E+ +I G L++P+L L + + + + Sbjct: 61 LPLILPLALMLGLLLAIARLYRDSEMAVITAIGVGPKRLLRPLLMLVVPVVLLVGACSLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSR 179 + P +Q+ +A ++ + LE F L + + +S +P+ T L +F+ + Sbjct: 121 LGPWAGRVAEQMIIEANRSVLMAGLEPGRFTPLPNGGVVYLSSISPDGTELGKVFMQ-RQ 179 Query: 180 DTQTHKIYYAQSGSIDLD---RQAIILNDGEVHRKSPISK-DISIMKFKSYTLQTESANS 235 ++ A G + + ++ + L+DG D + F + Sbjct: 180 KDDRIEVVSAAGGRMFFEGARQRFLELDDGHQVEGPAAGGLDYRLATFARNDVALPDGAQ 239 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + L+ + +++ H+RL L + F L+++ Sbjct: 240 TRTEDDPELMPTLQLI----------GDGRPQAQAQLHRRLAPPLIALAFALLTVP--LG 287 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 R+ RQ++ + ++ G F L+ + ++ + M Sbjct: 288 RSSPRQQRYGRMMLALMAYMVGTNLMFIGSGWIATGKIPAALGLWWLTLPLLALSIWMYA 347 Query: 356 K 356 + Sbjct: 348 R 348 >gi|319793491|ref|YP_004155131.1| permease yjgp/yjgq family protein [Variovorax paradoxus EPS] gi|315595954|gb|ADU37020.1| permease YjgP/YjgQ family protein [Variovorax paradoxus EPS] Length = 379 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 56/364 (15%), Positives = 139/364 (38%), Gaps = 16/364 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F + + + RSF + + +V I + +++ + L S + + + + Y + +P Sbjct: 2 LFHSSLRKELSRSFGATLVVLVTIVMTMMLIRTLGLASKGSVNPQEVFLVMAYTVLGYMP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + + L+ M R++E++I ++G ++P+ A + I + + + Sbjct: 62 TILSLSLFIAIVGTLSRMYRDSEMVIWFSSGRGLADFVEPLFRFAWPVLILIAVMALVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNN-TLQGIFIVDSRD 180 P S + + + + F + I K P+ T +FI + + Sbjct: 122 PWANSQTMGMRQQYEQRSDIERVTPGEFRESSGRMRVFFIDKDTPDGATATNVFIW-AIE 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEV-HRKSPISKDISIMKFKSYTLQTESANSST 237 A+SG I+ ++L++G+ R + + I +FK+Y + ++ +T Sbjct: 181 RGLQITTSARSGRIEDVGPNRFLMLSNGQRLERPLLPTSGLKISEFKTYGTRAGGSSDAT 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI-VAADKR 296 + L + + E R+ L + F L+++ V++ Sbjct: 241 ANTTPPRARTTLSLLRDRSTAA---------LGELGWRIGMLLAAINFVLLALTVSSVNP 291 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + R + +F + + G S+I ++ +L+ +F I+ +L + Sbjct: 292 RVGRSGNLLFALFAFVIYYNLLNLGQSWISSGRYGMGTFMLLLHGGVFLIAVAWLGLRNN 351 Query: 357 KYTK 360 + + Sbjct: 352 NWAR 355 >gi|194290552|ref|YP_002006459.1| permease, yjgp/yjgq family [Cupriavidus taiwanensis LMG 19424] gi|193224387|emb|CAQ70398.1| putative permease, YjgP/YjgQ family [Cupriavidus taiwanensis LMG 19424] Length = 376 Score = 132 bits (332), Expect = 1e-28, Method: Composition-based stats. Identities = 49/366 (13%), Positives = 130/366 (35%), Gaps = 23/366 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + + R + + L ++ +++ + + ++ S N +L + G L Sbjct: 2 ILQQALRRELAYTAGAVFLVMLTFMLTSLVIRILGMAANGKASPNDVLMLIGLATIGYLS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT +++E+++ + G S L+KPVL A + + Sbjct: 62 ILLSATLFISTLIVLTRWYKDSEMVVWFSAGISLRDLVKPVLQFAAPFIVLALLLGLFAW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIKISKYNPN-NTLQGIFIVDSRD 180 P + + S + F + + I + + + +F+ ++ + Sbjct: 122 PWANQQSALFRDRFEQRGVMSMIAAGRFIEPAKANYVLFIEGIDADMKHARNVFVANA-E 180 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANSS 236 + A G + + +++ +G + +P D I++F+ Y ++ ++ S Sbjct: 181 ADKIGVALAHQGQFETMPNGDRLVVMENGRRYSGTPGQIDYRIVEFERYAVKVDNKPPES 240 Query: 237 TIVLKANDQNLSFLL-NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 L ++ L+ NP N E R++ + F +I+I A Sbjct: 241 EASLPPKSRDTIDLIRNPTRENLG-----------ELVWRISLPILAFNFVMIAIPLA-- 287 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-NPYYIPILYLFLFCISSIFLLMI 354 + + + P+ ++ I + + + + + + LL+ Sbjct: 288 -YVNPRLGRYTPLVFAVLIYLTYSNLINLSQSWVRNGSIPFWLAWWPIHLAVFLGALLLF 346 Query: 355 KKKYTK 360 + + + Sbjct: 347 RYRQNR 352 >gi|313892370|ref|ZP_07825962.1| permease, YjgP/YjgQ family [Dialister microaerophilus UPII 345-E] gi|329121341|ref|ZP_08249967.1| YjgP/YjgQ family permease [Dialister micraerophilus DSM 19965] gi|313119229|gb|EFR42429.1| permease, YjgP/YjgQ family [Dialister microaerophilus UPII 345-E] gi|327469750|gb|EGF15216.1| YjgP/YjgQ family permease [Dialister micraerophilus DSM 19965] Length = 361 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 57/356 (16%), Positives = 119/356 (33%), Gaps = 26/356 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPT 59 M+ + YIL+ FL I +L ++ S +KI IP Sbjct: 1 MRILDKYILKEFLGPFLFGVAAFTAIFLGSDTLLSIAGFITKYGASSLSAIKIFILAIPR 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ P + ++S++ +EL+++ N+G S + L P+ + ++SI Sbjct: 61 IIVYTFPMAVLLGALMCMSSLSGASELIVMRNSGQSFLRLAMPIFIFSAIISICAIAFNE 120 Query: 120 IIEPKCRSTI---------KQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NT 169 + P K L+ + +++ L I KYNP Sbjct: 121 FVVPWTNREYQYILDVEIKKNLNPDIVDNIVMKDIQDGNLLHL-----IYAKKYNPETKE 175 Query: 170 LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT-- 227 L+ I I + +D + KI + G + +P + + F S Sbjct: 176 LKDITIQEFKDGKPVKIEMSPKA--VWKEGVWDFKQGVAYDITPDGVEHK-LSFDSQAVP 232 Query: 228 LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGL 287 + + ++S L + + ++ E HKR + + ++F + Sbjct: 233 FIQKPDEIKNSNNNVGEMSISEL-KKTADLLKSANQDPTSFYMEIHKRFSLPIASLVFAI 291 Query: 288 ISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 I + +QR F I +++ + + + P ++L Sbjct: 292 IGAPLGIR----KQRSSSSIGFGISVIVIFIYYAVMTFMEAMGEGHILPPFAAVWL 343 >gi|322506460|gb|ADX01914.1| permease [Acinetobacter baumannii 1656-2] gi|323516339|gb|ADX90720.1| permease [Acinetobacter baumannii TCDC-AB0715] Length = 350 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 52/340 (15%), Positives = 123/340 (36%), Gaps = 16/340 (4%) Query: 18 MSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVL 77 M + I ++++ + + +IL I GY +P L ++ P F + V Sbjct: 1 MVIALLTLIMMGGRLIKYFGVAAQGRLDASILFSIIGYRLPEFLTLILPLGFFIGLMLVF 60 Query: 78 TSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQ 137 + + E+ +++ +G SR L + ++ + ++ + + + P ++L+ Sbjct: 61 GRLYVDHEMAVLNGSGVSRHQLARLLIPMTLVYMVCQSVLMLWMTPWGLREFEKLTTTQA 120 Query: 138 LALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDS--RDTQTHKIYYAQSGS- 193 + F + F I + + L+ IF ++ + + A+ + Sbjct: 121 VRTGFDLVRPREFISSGP-YTIYAGSLSEDRKNLKDIFFYQRAAKEGKPDVMILAKEATR 179 Query: 194 --IDLDRQAII-LNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFL 250 + D ++ L G + P + +F+SY L+ E+ + + Sbjct: 180 VEVANDTANVVDLVQGRRYEIFPGQPKYTQAEFQSYRLRLENDKDVKFESGDVEALSTSK 239 Query: 251 LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFI 310 L N+P RSE RL +I ++S+ ++ + ++ P Sbjct: 240 LFSKANDPVV--------RSELGWRLFGPFTIIIALMLSVALSEVSPRQGRYYRLIPSIF 291 Query: 311 SLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 + + I K E + + P+ L +++F Sbjct: 292 IFASLIVLMIAIKTRISKGELDIWAYPVALLVYAIAAALF 331 >gi|241663806|ref|YP_002982166.1| permease YjgP/YjgQ family protein [Ralstonia pickettii 12D] gi|240865833|gb|ACS63494.1| permease YjgP/YjgQ family protein [Ralstonia pickettii 12D] Length = 372 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 56/367 (15%), Positives = 128/367 (34%), Gaps = 26/367 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + L ++ +++ + + ++ + N +L + G L Sbjct: 2 IFEQALRRELSFTAGAVFLVLLTFMLTTLVIRILGMAANGEANPNDVLLLIGLATLGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT +++E+++ +G S I+PVL ++ + + + Sbjct: 62 ILLCATLFISVLLVLTRWYKDSEMVVWFTSGISLTDFIRPVLRFSLPFILLVALLALFGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT--LQGIFIVDSRD 180 P + + S + F Y+ + N + +F+ ++ Sbjct: 122 PWANQQSALFRDRFEQRDVLSMISAGRFIEPAHGNYVLFIEGVDNGMKHARNVFVANAEQ 181 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANSS 236 + + A++G + I+L+ G + +P D I++F Y ++ + + Sbjct: 182 DKIG-VAMAKTGEFKTMPNGDRFIVLDKGRRYEGTPGKLDYRIVEFDKYGVKVANKPPQA 240 Query: 237 TIVLKANDQNLSFLL-NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 L ++ LL NP P N E R+ L + F LI+I A Sbjct: 241 DANLPTKSRSTKDLLANPTPENLG-----------ELVWRIGLPLLALNFVLIAIPLA-- 287 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI---FLL 352 R + IF L + + + + + +++ LL Sbjct: 288 YVNPRLGRYTPMIFAVL--IYLTYSNLLNLSQAWVSQGKMNVFMAWWPIHLAAFICAVLL 345 Query: 353 MIKKKYT 359 + Y+ Sbjct: 346 FRFRHYS 352 >gi|171059277|ref|YP_001791626.1| permease YjgP/YjgQ family protein [Leptothrix cholodnii SP-6] gi|170776722|gb|ACB34861.1| permease YjgP/YjgQ family protein [Leptothrix cholodnii SP-6] Length = 364 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 54/282 (19%), Positives = 109/282 (38%), Gaps = 21/282 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ + + + RSF + + I+ I + +++ + + S ++ + GY LP Sbjct: 2 LFDSTLRKELSRSFGGTLIVILTIVLTMMLIRTLGQAALGRVSPQDVVLLLGYTSLGHLP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + + + LT M ++E+ I +G S ++PV+ + F+ + Sbjct: 62 TMLCLSLFVAVVSTLTRMYGDSEMTIWFASGVSLTRFVRPVVRFGTPIVFFVAALLLFVW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPN-NTLQGIFIVDSRD 180 P I +L + + S + F + I K +P+ T + IFI+D R Sbjct: 122 PWSNRNISELRGRYEQRSDLSRVAPGQFQTSSNGQRVFFIDKQSPDAGTGRNIFILDQR- 180 Query: 181 TQTHKIYYAQSGSI-----DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + AQ+G I D + ++L++G + +I +F Y+++ Sbjct: 181 VDRESVTSAQTGRIDLPDADDTHRRLVLDNGARTDLDLKGETRTISRFDQYSIRISEKAL 240 Query: 236 STIVLKANDQNLSF--LLNPNPNNPNYRPELLETYRSEFHKR 275 + I SF LL+ +P R+E R Sbjct: 241 TRIDEPPPKARSSFDLLLSSDP-----------KVRAELAWR 271 >gi|166364704|ref|YP_001656977.1| permease [Microcystis aeruginosa NIES-843] gi|166087077|dbj|BAG01785.1| permease [Microcystis aeruginosa NIES-843] Length = 387 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 40/367 (10%), Positives = 128/367 (34%), Gaps = 35/367 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPT 59 + + Y++ + FL S + + + N V + L L+I +P Sbjct: 14 IALIDRYLISQLLPPFLFSVGLFASLGVAIGNLSDLANQVVDANLPLASALEILLLKVPE 73 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + P + T ++ ++E + + + G + L P L++++++ F+ Sbjct: 74 FVTYSLPVSLLLATLITYGRLSSDSETVALQSCGVTLYRLFIPTFCLSLIVTVVTFLLNE 133 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLD-------------DDLYIKISKYNP 166 + P ++ + ++ S+ + F+ D + + + ++ Sbjct: 134 YVVPNANYRATEILVQ-KINKEASFWKNKDFYYPDYEIKTLENGTINRNLISLFYAEQFD 192 Query: 167 NNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDI-SIMKFKS 225 ++ + ++ + ++I A S + +G ++ +P + ++ FK+ Sbjct: 193 GEKMKTVTVIRWLKQELNQIIIADSARWNAVDNVWDFFNGIIYELTPPNASYRQVIPFKA 252 Query: 226 --YTLQTESANSSTIVLKANDQNLS------FLLNPNPNNPNYRPELLETYRSEFHKRLT 277 L + + + + N+ LL + ++ + + ++ +++ Sbjct: 253 EKIALSRSAFDFARQSRDPYEMNIPQAIEYVQLLKLSGDD-----KRVRFFQVRIQQKIA 307 Query: 278 QWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFG-VFWGFSYIIHKIEQNPYYI 336 ++F I + LS++ +++ ++++ + Sbjct: 308 FPFVCIVFATIGCALGSLPQ-----RISRGTSFGLSVAIVFLYYLLNFLVGSLGLTATLS 362 Query: 337 PILYLFL 343 P L +L Sbjct: 363 PFLAAWL 369 >gi|258544323|ref|ZP_05704557.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826] gi|258520403|gb|EEV89262.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826] Length = 352 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 63/361 (17%), Positives = 134/361 (37%), Gaps = 16/361 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y++R FL + L ++ I ++ + ++ +L+ + + G Sbjct: 1 MPILYRYLIRETLAVFLATNLILLAILLSFRLSTLLAAAAAGNMALSAVWMLIGLQAVRF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P F + L + R+ E+ G + + +L AI + + L Sbjct: 61 LVILMPLAFVLAAVMTLGRLYRDHEISAALACGIAPRHQTRALLACAIPIGLLLLTLSMS 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ + L +AQ N + RLDD + L+ FI Sbjct: 121 VLPRVYRGQEALRQQAQQEAGMILFTPNTYRRLDDGTIVHTGSIE-GGQLRDFFIARDEP 179 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 H + A +G + D Q ++L+DG + F ++T+ Sbjct: 180 DGGHSLILAANGEMQGDEQQRHLLLHDGRRLAWNADHDPAHTTLFTYQHADLRLPGANTL 239 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 ++++ L N + PE L ++S + + +++ + L++ R+ Sbjct: 240 AASSDNR----LRNLPTSELGTSPEHLSEWQSRSNPAVALFIYALALPLLA------RSQ 289 Query: 299 VRQRK--KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 RQ + KI P FI+ ++ + + I K +Q P +L ++ I + + Sbjct: 290 PRQGRYQKIVPAFIAFALYINLLDLITIAIRK-QQIPPLPGSYWLHGAVLALILICWQRS 348 Query: 357 K 357 + Sbjct: 349 R 349 >gi|329907053|ref|ZP_08274545.1| hypothetical protein IMCC9480_3108 [Oxalobacteraceae bacterium IMCC9480] gi|327547110|gb|EGF31984.1| hypothetical protein IMCC9480_3108 [Oxalobacteraceae bacterium IMCC9480] Length = 376 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 52/367 (14%), Positives = 134/367 (36%), Gaps = 27/367 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ + R + + + I + +++ + + + +L + G+ +P Sbjct: 2 IFQRALRRELISTAGAVFTTLFTITITVMLIKILGQAAGGKVASEDVLALIGFAALNYMP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + V+T +++E+++ +G S I VL + + + + + Sbjct: 62 VILILTTFISVLLVVTRSYQDSEMVVWFASGLSLTRWIPTVLSCGLPVVLVIALLSFYAT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLD-DDLYIKISKYNPNNT-LQGIFIVDSRD 180 P + + + + + + F + + + ++ +F+ RD Sbjct: 122 PWANRSSSEFRERFEKRADIAKVAPGKFQESASSNRVFFVEGVTGDAMNVRNVFVNTVRD 181 Query: 181 TQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESA-NSS 236 I ++ G ++D ++L++G + + +D +M+F+SY + SA Sbjct: 182 -GKSSIVVSKEGRTEVDANGDKFLVLSNGRRYEGTLDERDFQLMEFESYGVLISSAVPGL 240 Query: 237 TIVLKANDQNLSFLL-NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 L + + LL NP+ + E RL+ L + L++I Sbjct: 241 MADLSSRSMSTMALLANPD-----------GFNQGELLWRLSLPLMCLFLMLLAI---PL 286 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-----PYYIPILYLFLFCISSIF 350 + + + + I+L + S + + QN + P+ L + I+ +F Sbjct: 287 GFVNPRGGRSANLIIALLLFVFYSNMISLMQAAVAQNRLGVWLAWWPVHVLAMAVIALLF 346 Query: 351 LLMIKKK 357 +K Sbjct: 347 SWRLKMN 353 >gi|86605895|ref|YP_474658.1| YjgP/YjgQ permease [Synechococcus sp. JA-3-3Ab] gi|86554437|gb|ABC99395.1| putative permease, YjgP/YjgQ family [Synechococcus sp. JA-3-3Ab] Length = 400 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 56/378 (14%), Positives = 127/378 (33%), Gaps = 29/378 (7%) Query: 2 KSFELYILRCIGRSFLMSCLFIV-FIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + YI+ + F + V + + + LV + SL+ L++ P + Sbjct: 26 GLMDRYIISEMLLPFFFGVGAFTTLVMAVGSLFELVRLVVEAGLSLSAALQVFVLRAPGI 85 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + T ++ + E+ + G S L+ P L L++L++ F+ + Sbjct: 86 IVLTFPMSMLLATLLAYGRLSADNEITALRGCGVSLYRLVVPALLLSLLVTTLTFLFNEL 145 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLE---------------ENLFFRLDDDLY--IKISK 163 + P +A E + F R L Sbjct: 146 VVPVSNRQAALTLNRALNRTPEFRRENILYQEFGEILAPEPDGTFSR-RQGLTRQFYARS 204 Query: 164 YNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKF 223 ++ ++G+ ++D + +I AQ G D + +G + SP +I F Sbjct: 205 FD-GQQMRGVIVLDLSNEALSQILLAQQGRWDPQENLWVFEEGTNYIVSPDGTYSNIATF 263 Query: 224 KSYTLQT--ESANSSTIVLKANDQNLSFLLNPNPNNPNY-RPELLETYRSEFHKRLTQWL 280 L+ + + V + N+ L + + + + ++ Sbjct: 264 ARQELRLPRAPLDLAQEVRSPEEMNIQELRRYIEVIASSGDLQGVRRLQVSLSQKYAIPF 323 Query: 281 FPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP--I 338 + F LI A + ++ + +S+ I F + ++ + Q P Sbjct: 324 ACLAFTLIGAPLALRP---QRTSSSLGLGLSVLIIFAYYV-LLFVSQALGQIGTLGPEVA 379 Query: 339 LYLFLFCISSIFLLMIKK 356 +L F S++ L ++ + Sbjct: 380 AWLPNFICSAVGLGLLYR 397 >gi|16332044|ref|NP_442772.1| hypothetical protein sll0496 [Synechocystis sp. PCC 6803] gi|1001356|dbj|BAA10843.1| sll0496 [Synechocystis sp. PCC 6803] Length = 394 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 41/374 (10%), Positives = 125/374 (33%), Gaps = 26/374 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPT 59 + + Y+ R + FL S + + + + N + + ++ +P Sbjct: 21 ISLMDRYVARQLIPPFLFSVGVVASLGLAIGNLSDLGNKIVEKNLPVAKAAEVLLLKVPE 80 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 L P + T ++ + E++ I + G S LI P + L++L++ + F+ Sbjct: 81 FLAYSLPVAVMLATMMTFGRLSGDCEIIAIRSCGVSLYRLILPAVVLSLLVTGWAFVLTE 140 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLF------FRLDDDLY-------IKISKYNP 166 + P + ++ + ++F +LD+ + K++ Sbjct: 141 WVVPVANYRATSILIESIDEEHPFWQNRDVFYPEFEEIKLDNGQTARRLKSLVYAEKFD- 199 Query: 167 NNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSY 226 +Q + ++ + I + + + + D + G V+R + + F + Sbjct: 200 GKEMQNLTVLQWTENHLKHIVLSDNATWNNDNKRWDFFHGTVYRLTETEDYQEAVPFTNK 259 Query: 227 TLQT--ESANSSTIVLKANDQNLSFL---LNPNPNNPNYRPELLETYRSEFHKRLTQWLF 281 + + + + + ++ + + + R+E ++L Sbjct: 260 QIALPQSAFDFARQGRDPYEMTIAEAQDYIKILKLIGDEKKTQFFQVRTE--QKLAFPFV 317 Query: 282 PVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHK-IEQNPYYIPILY 340 ++F ++ + ++ + +++ I F + + I + Sbjct: 318 CIVFAVVGSAIGARP---QRISRATGFGLTIVIIFAYYILGFFSGSLGIVGLISPTLAAW 374 Query: 341 LFLFCISSIFLLMI 354 L F + + ++ Sbjct: 375 LPNFVGLGVGIWLL 388 >gi|190572727|ref|YP_001970572.1| putative transmembrane permease [Stenotrophomonas maltophilia K279a] gi|190010649|emb|CAQ44258.1| putative transmembrane permease protein [Stenotrophomonas maltophilia K279a] Length = 360 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 52/361 (14%), Positives = 130/361 (36%), Gaps = 18/361 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L +SFL + + ++ ++ ++ + ++ +L G Sbjct: 1 MLKLDRYLLGDFVQSFLATLIVLLVVSVGGVLVDILGNIADGRLPAKLLFSQLGLQFIAY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP++ P + + + R++E+ +I G L++P+L L + + + Sbjct: 61 LPLILPLALMLGLLLAVARLYRDSEMAVITAIGVGPRRLLRPLLMLVVPVVALVGACSLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSR 179 + P +Q+ +A ++ + LE F +L + + +S +P+ T L +F+ + Sbjct: 121 LGPWAGRVAEQMIIEANRSVLMAGLEPGRFTQLPNGGVVYLSSISPDGTQLGRVFLQ-RQ 179 Query: 180 DTQTHKIYYAQSGSIDLD---RQAIILNDGEVHRKSPISK-DISIMKFKSYTLQTESANS 235 ++ A G + + ++ + L+DG D + F + Sbjct: 180 KDDRLEVVSAAGGRMFFEGARQRFLELDDGHQVEGPVAGGLDYRLATFARNDVALPDGAQ 239 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + + L + ++ H+RL L + F L+++ Sbjct: 240 TRTGDDPELMPTTQLFGDDRPEAQ----------AQLHRRLAPPLIALAFALLTVP--LG 287 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 R+ RQ++ + ++ G F L+ + ++ + M Sbjct: 288 RSSPRQQRYGRMMLALMAYMVGTNLMFIGSGWIANGKIPPALGLWWLTLPLLALAIWMYA 347 Query: 356 K 356 + Sbjct: 348 R 348 >gi|33865647|ref|NP_897206.1| permease [Synechococcus sp. WH 8102] gi|33632817|emb|CAE07628.1| possible permease [Synechococcus sp. WH 8102] Length = 385 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 46/371 (12%), Positives = 121/371 (32%), Gaps = 21/371 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + +++ I L + + + + + + + L++ +P L Sbjct: 14 LLDRWLVGEILAPLLFAVAAFTVVGLSIGVMFELVRRLVEDGLPAWTALQVMLLSLPRFL 73 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P T + + N+EL + + G S + L+ P L L+ LL+ + ++I Sbjct: 74 VLSFPMATLFATLLAYSKLTANSELTALRSVGVSTVRLVVPALVLSALLTGMTLLFNDVI 133 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLY--------------IKISKYNPN 167 P+ + + KA + +++ + + +++ Sbjct: 134 VPQANTQAEVTLQKALGRALATEKGKDIIYSRFGRVREPGSERSGRGLKQLFYSRRFDK- 192 Query: 168 NTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 + + ++D ++ A+ + DG++ + ++ + + F Y Sbjct: 193 GEMVDVTVLDFSRAGFRQMLVAERALWNEGEAKWEFRDGQILTLN-LNGSTTRVDFDRYL 251 Query: 228 LQTESANSSTIVL--KANDQNLSFLLNPNP-NNPNYRPELLETYRSEFHKRLTQWLFPVI 284 S L AN+ ++ + + + ++ T + V+ Sbjct: 252 YPLSSGPLKVARLPDDANNMTIAEAIEAERVEAEAGNLKAARKLQVRIQEKFTFPMACVV 311 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 FGLI + R R + L I FS+ ++ + +L + Sbjct: 312 FGLIG-SSLGSRPGSRTSRSQGFGISILLILGYYALSFSFSSLGVKGVLPALLAAWLPVL 370 Query: 345 CISSIFLLMIK 355 L+++ Sbjct: 371 ISLGAGTLLLR 381 >gi|113953439|ref|YP_730497.1| membrane protein, YjgP/YjgQ family protein [Synechococcus sp. CC9311] gi|113880790|gb|ABI45748.1| putative membrane protein, YjgP/YjgQ family protein [Synechococcus sp. CC9311] Length = 392 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 55/365 (15%), Positives = 133/365 (36%), Gaps = 22/365 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + ++L + L + ++ V + + + S I +++ +P+ L Sbjct: 22 LIDRWLLGELIGPLLFALTAFTVVSLSVGVMFDLVRKIVESNLPWTIAVQVLLLKLPSFL 81 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P M + + ++ N+EL + + G + +I P + LA+L++ F+ ++I Sbjct: 82 VISFPMATLMASLLAYSRLSANSELTALRSVGVTASRMIAPAIALALLMTSLSFLFNDVI 141 Query: 122 EPKCRSTIKQLSAKAQLALTFS----YLEENLFFRLDD-------DLY--IKISKYNPNN 168 P+ + + +A + + + F R+ + L ++ + Sbjct: 142 VPRTNRSAEFTLQRALGKAIAAEKGDDIVYSRFGRVAEPDGKSSKGLTQLFYAREFE-DG 200 Query: 169 TLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 T+ G+ ++D ++ A + + NDG++ +P S F Y Sbjct: 201 TMIGVTVLDLSRFGFTQMLVADKAKWNQSQAKWEFNDGQILTLTPSGSTTS-ADFDRYLY 259 Query: 229 QTESAN--SSTIVLKANDQNLSFLLNPNP-NNPNYRPELLETYRSEFHKRLTQWLFPVIF 285 A + + AN+ +S + + + R ++ T + ++F Sbjct: 260 PLSPAPLRIAKLPKDANNMTVSEAIEAEQLLSDAGDRKEARRLRVRIQEKFTVPMACLVF 319 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC 345 GLI K + + IS+ + F V++ S+ + P L + Sbjct: 320 GLIGSSLGAKPNS--RTSRSQGFGISVVLIF-VYYVLSFSFSSLGVKGTLAPFLAAWGPV 376 Query: 346 ISSIF 350 + S+ Sbjct: 377 LISLA 381 >gi|331007487|ref|ZP_08330658.1| putative permease [gamma proteobacterium IMCC1989] gi|330418711|gb|EGG93206.1| putative permease [gamma proteobacterium IMCC1989] Length = 408 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 51/370 (13%), Positives = 133/370 (35%), Gaps = 25/370 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + ++ ++ I + ++ + ++ +L + Y +P + Sbjct: 30 IIPRYLTKEVLQTTFAVTSVLLIIIMSGRFVKYLAEAAAGKIDARVLFAVMFYRLPGFME 89 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + + ++E+ ++ + G SR LI A ++ I + + Sbjct: 90 LILPLGFFVSILLAYGRLYTDSEMTVLFSCGVSRKQLIAWTYIPAGIVLIIIATLSLWLT 149 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNTLQGIFIVDSRDT 181 P +++ A+ Q F ++E F + L + N F + + + Sbjct: 150 PLGLHEAEKILAQQQARNDFETMQEARFQVSRNKSLVSYTEDISDNREQLNAFFLANMNV 209 Query: 182 QTHKIYYAQSGSI-------DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES-A 233 + + + D++ ++L G + P + + I +F+ + + Sbjct: 210 GADEPLMTVRSEVAEYKILGETDQRYLVLKRGARYEGQPGTANYRITEFEEFGQHVDPKG 269 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + K N LL + + Y++ RL+ L +I L+ ++ Sbjct: 270 EIAVTNNKVNRLPTVELLGSDLPD----------YQAALQWRLSSPLVVLIVTLLGVLF- 318 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI-EQNPYYIPILYL--FLFCISSIF 350 +R + +F ++ + + + EQ L+ F+F + +I Sbjct: 319 --SHTNPRRGRYAMLFPAILLYLIYLVLLNSARGAVEEQRLSSAIGLWGVHFMFFVLTIS 376 Query: 351 LLMIKKKYTK 360 LL K+++ + Sbjct: 377 LLADKQQWKR 386 >gi|85859085|ref|YP_461287.1| permease [Syntrophus aciditrophicus SB] gi|85722176|gb|ABC77119.1| permease [Syntrophus aciditrophicus SB] Length = 359 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 62/358 (17%), Positives = 137/358 (38%), Gaps = 10/358 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI R R FL+ L + + ++ +++ ++ + + + +L + IP + Sbjct: 1 MTILDRYISREFLRFFLLVILSFLSLFLIVDFFEKLKMLINYSATFYQILAFFFFRIPMM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + + S+++N+E++ + +G S P+L ++ L+++F F+ + Sbjct: 61 LSLTIPAAVLLSSLLTFGSLSKNSEIVAMRASGVSLYRSSIPILLISFLIALFTFVFSEL 120 Query: 121 IEPKCRSTIK-QLSAKA-QLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI-VD 177 I P + + + + + +E +++R +Y +NTL+GI + Sbjct: 121 ITPYANEKAEYIRKVEIEKKEIQGIFKQEQIWYRGTRGIYNFKLFDPEHNTLRGITLNYM 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 R A+ DR + + + R + + E+ + Sbjct: 181 DRKMNLIMRVDAERA--VWDRNQWVFYNLLIVRFDSAGFPVMERYGEKILDFPETPSDFR 238 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 ++ K ++Q F L Y ++ H ++ V+ +I I + K Sbjct: 239 VIQKDSEQMGYFELRKYVQKIRTEGYDATRYLADLHGKIAFPFVCVLLAVIGISFSLK-- 296 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN---PYYIPILYLFLFCISSIFLL 352 R IF L I F + F++ + P L LF +S++ L Sbjct: 297 TERSGGLAGSIFAGLIIGFSYWILFAFSMSLGRSGTLPPLLAAWLANLLFGLSALVLF 354 >gi|261416539|ref|YP_003250222.1| permease YjgP/YjgQ family protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372995|gb|ACX75740.1| permease YjgP/YjgQ family protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326800|gb|ADL26001.1| putative membrane protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 478 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 50/239 (20%), Positives = 102/239 (42%), Gaps = 6/239 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+L+ + FL S I F+ V +++ ++ V S + +L+I + +L Sbjct: 2 ILVRYVLKELIGPFLASLFGITFLFVVDFLVKILDNVLSKGLPTSTVLEIFVLNLAWMLS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + + M+ + E+ + G S ++L++PVL +A+LLS+ + + N + Sbjct: 62 LSIPMAVLVASLMTFGRMSGDQEITAVKAAGISPLSLMRPVLLVALLLSVLMVVFNNWVL 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDT 181 P+ +L +++ + + +++ +P + TL GI I + Sbjct: 122 PEANHRSVELMNAVSRKKPHVFIDAGRLITQFPGVQLWVNRIDPVSGTLYGIQIFEMEKK 181 Query: 182 QTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKD-ISIMKFKSYTLQTESANS 235 +I YA S S+D + L GE H P D ++F S L ++ + Sbjct: 182 GAPRIVYADSASMDYVDNGATLMLRLRSGETHLVDPDDSDNYFRIRFFSQDLAMQNVDD 240 Score = 38.8 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 35/96 (36%), Gaps = 6/96 (6%) Query: 263 ELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGF 322 + Y E HK+ + IF LI A + R+ I SL+ F ++W Sbjct: 344 KRAAQYMVEIHKKFSTAFACFIFVLIG---APLGIMARKGGIGTGILYSLAF-FVIYWIC 399 Query: 323 SYIIHKIEQNPYYIP--ILYLFLFCISSIFLLMIKK 356 + P +++ I ++ +L+ + Sbjct: 400 LIGGENLADRLIVSPELAMWISNIIIGAVGILLTRA 435 >gi|126696921|ref|YP_001091807.1| putative permease [Prochlorococcus marinus str. MIT 9301] gi|126543964|gb|ABO18206.1| possible permease [Prochlorococcus marinus str. MIT 9301] Length = 401 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 60/376 (15%), Positives = 136/376 (36%), Gaps = 23/376 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + ++L I + + I+ V + I + L + LK+ + +P+ L Sbjct: 25 LIDRWLLGQIIPPMIFAISAFTVISLSVGVMFDLIRKIVEFGLPLFLALKVLFFSLPSFL 84 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + T ++ N+ELL + + G +I P + L+I ++ F + + Sbjct: 85 VLSFPMAVLLSTLLAYGKLSSNSELLALKSLGIKTSRIISPAIALSIFMTGLTFYFNDNL 144 Query: 122 EPKCRS-TIKQLSAKAQLALTFSYLEENL-FFRLDDDLY---------------IKISKY 164 P K L A + + ++N+ F R + I + + Sbjct: 145 VPASNKLAEKTLRAGIGSSFSAEQRKDNIMFSRYGSRISSSNKKPTKTNTFLTHIFYASW 204 Query: 165 NPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK 224 NN ++G+ ++D +I A++G D + I +DG + P + +I +F+ Sbjct: 205 YENNIMEGVTVLDFSREDFQQILKAKNGVFDKKSSSWIFSDGNIVSIDPSGQTTNI-QFQ 263 Query: 225 SYTLQTESAN--SSTIVLKANDQNLSFLLNPNPNNPNYRP-ELLETYRSEFHKRLTQWLF 281 YT + + AN+ L + + + + ++ T Sbjct: 264 EYTYPFVEGPMELAKVPKDANEMTLKQAIQAEKIYEKTGNLKEIRRIKVRIQEKFTLPFA 323 Query: 282 PVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL 341 ++FGLI + ++ +R K + I F + ++ I +L Sbjct: 324 CLVFGLIG-SSLGSKSNLRSSKSQGFGLSVILILIYYVMSFLFSSFGVKGILPPIFAAWL 382 Query: 342 FLFCISSIFLLMIKKK 357 + + ++++ Sbjct: 383 PVLISLGGGIYLLRRS 398 >gi|294648981|ref|ZP_06726429.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] gi|292825116|gb|EFF83871.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] Length = 366 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 51/355 (14%), Positives = 123/355 (34%), Gaps = 16/355 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + + L+ + I Q+++ + +LL I Y +P L Sbjct: 2 IIRRYLVKQVVSTSLVVTALLTLIIMGGQLIKIFGRAAQGRLDGGVLLSIIAYRLPEFLT 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + V + + E+ +++ +G SR L + +L + + I + Sbjct: 62 LILPLGFFIGLMLVFGRLYVDHEMAVLNGSGVSRNQLTRLLLPMTAVFLIVQAVLMCWGA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIV--DSR 179 + L + F + F I + + L+ IF R Sbjct: 122 SAGIRGYQSLMQTQAVRAGFDLVRPKEFISSGS-YTIYAGSLSEDRKNLKDIFYYYKSDR 180 Query: 180 DTQTHKIYYAQSGS---IDLDRQAII-LNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + + ++ A+ + I+ D +++ L G + P + +F+SY L+ E+ Sbjct: 181 EDKPDQMILAKEATRVEIENDTASVVDLVQGRRYEIYPNQPRYTQAEFQSYRLRLENDKD 240 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 S + + ++ R E R+ V+ +++ ++ Sbjct: 241 VNFE--------SEDVEALSMSKLWQKRDDFVVRGELGWRIFGPFVMVVALFLAVALSEV 292 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 + ++ P + + I K E + + P + L +++F Sbjct: 293 SPRQGRYYRLIPAIFIFASLIVLMIAIKTRISKEELDIWAYPAVLLIYGIAAALF 347 >gi|157157059|ref|YP_001465770.1| putaitve permease [Escherichia coli E24377A] gi|157079089|gb|ABV18797.1| putaitve permease [Escherichia coli E24377A] Length = 366 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 54/364 (14%), Positives = 133/364 (36%), Gaps = 25/364 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ +I ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + + + + + + +F+ R Sbjct: 122 PWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKG 181 Query: 183 T--HKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F+ Y + Sbjct: 182 NARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L N + + R+E + R+T + L+ + Sbjct: 242 DPNDTDQMDMRTLWNTD----------TDRARAELNWRITLVFTVFMMALMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFLFCISSIFLLMI 354 RQ + +S+ + ++ F I ++ N P L+++ + + L +I Sbjct: 290 NPRQGR-----VLSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAII 344 Query: 355 KKKY 358 + Sbjct: 345 LNLW 348 >gi|54298619|ref|YP_124988.1| hypothetical protein lpp2683 [Legionella pneumophila str. Paris] gi|53752404|emb|CAH13836.1| hypothetical protein lpp2683 [Legionella pneumophila str. Paris] Length = 359 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 52/373 (13%), Positives = 134/373 (35%), Gaps = 30/373 (8%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + + + +V I Q +Q +N +S + +++K+ +P ++ Sbjct: 2 IIFRYLTKEVFLTLIALTAILVLIFMSNQFIQYLNRAASGSIPGFVIMKLLMLELPNLMG 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + + +E+ ++ G L+K +A ++ + + + Sbjct: 62 LLLPLGFYVALLLAYGRLYAESEMTVLRACGYGPKQLLKHSFAMATVVLVVVAVVMIWAS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNT-LQGIFIVDSRD 180 P +L + + F ++ + N +++ + IF+ Sbjct: 122 PVIAVERTKLIRSTGIKTLVQTIMPGRFHAINSGQQIFYVQSMNRDHSQAEQIFMAKHSV 181 Query: 181 TQTHK---IYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 + +A +++ Q I+L +G+ ++ P D I +F SY + + Sbjct: 182 QDNRLLWDVLWADKAFAEVNPQTGEEYIVLQNGKEYQGVPGHADYQIAEFASYKSKLPNP 241 Query: 234 NS--STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 A ++L L N N +E R++ L + L+++ Sbjct: 242 TVVMHDDARTAKTRDLWPLNNHNLKK-----------AAELQWRISIPLMVLTLTLVAVP 290 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI---EQNPYYIPILYLFLFCISS 348 R R K + + F + F ++ + P++I + ++ ++ Sbjct: 291 --LSRVSPRSGKYSKLLPAIIIYIF--YANFMFVSRDAIATGKIPWWIGMWWVH-AAVAI 345 Query: 349 IFLLMIKKKYTKI 361 + +L I + K+ Sbjct: 346 LGILFIWRNQVKL 358 >gi|261749398|ref|YP_003257083.1| hypothetical protein BPLAN_316 [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497490|gb|ACX83940.1| conserved hypothetical protein [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 395 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 68/386 (17%), Positives = 144/386 (37%), Gaps = 73/386 (18%) Query: 36 INLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS 95 ++ ++ ++ I+LK Y +++P+V P + + ++ + EL+ I ++G S Sbjct: 1 MDELTGKNINILIILKFIYYFGISIIPLVIPISILLTSIITYGYISESQELIAIKSSGIS 60 Query: 96 RITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD 155 ++KP+L + LLS+ L+ + P+ + ++L + + L+E +F L Sbjct: 61 LFRVMKPLLCITFLLSVGLYFFSDFSIPEAKRKAQELGYQISITHPSLRLKEGVFVNLFP 120 Query: 156 DLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQ----AIILNDGEVHRK 211 D +IKI K + L+ +FI A+ G + +++ I L G +R Sbjct: 121 DFFIKIGKKKNSKLLENLFIFFYGKNLAINTILAEKGILIPNKKEDGFQIKLMKGFFYRD 180 Query: 212 SPISK---DISIMKFKSY-----------------------TLQTESANSSTIVLK---- 241 +P ++ F S+ TL T+ LK Sbjct: 181 NPYEGKTYSYQMVHFNSFIQSFKKPLIEYKNLDYYYDDSYKTLDTKKLMEKIHFLKKKNC 240 Query: 242 --------------------------ANDQNLSFLLNPNPNNPNYRPELLE-------TY 268 ++L ++ + ++ + L+ Y Sbjct: 241 QLYSDFQKLNYNSLFQKKKIFFKRSKNKKRSLLLHISILIDELQHQKKFLQNRKKHLAKY 300 Query: 269 RSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHK 328 + E K+ T + +I LI A A++R+ P I++ I + ++ Sbjct: 301 QFELQKKFTFPVTCIIMFLIG---APLGAIIRKGGMGRPTLIAIIIFIIYHTLLTITQNQ 357 Query: 329 IEQN---PYYIPILYLFLFCISSIFL 351 E+ P+ + F+F SI++ Sbjct: 358 GEKAEIWPWIGAWIPNFVFFPLSIWI 383 >gi|238787644|ref|ZP_04631442.1| Inner membrane protein yjgP [Yersinia frederiksenii ATCC 33641] gi|238724431|gb|EEQ16073.1| Inner membrane protein yjgP [Yersinia frederiksenii ATCC 33641] Length = 364 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 58/368 (15%), Positives = 131/368 (35%), Gaps = 27/368 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFSQKLVRILGAAVDGEIPTNLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G + +LI L LA++ S ++ + Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGMGKKSLIMAALILALVTSALAAVNTIWLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLY-IKISKYNPNNTLQGIFIVDSRDT 181 P ++ A+ + + L F D + I + +F+ R Sbjct: 122 PWSSKHQDEVLTDARANPSLAALAGGQFKSSTDGNSALFIGNVS-GKEFNRVFLAQLRPN 180 Query: 182 QT--HKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + A SG + Q +ILN G + + + +D I F Y Sbjct: 181 GNQRPSVVVADSGHMTERPDGSQVVILNKGTRYEGTALLRDFRITDFVDYQTIIGHQEVQ 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 A + L + + R+EFH RLT + VI L+ + Sbjct: 241 QDNSVAEQMTMRQLWHATEPDA----------RAEFHWRLTLIVSVVIMALLVVP--LSV 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFLFCISSIFLLM 353 RQ + +S+ + ++ F + + N P+++L+ + + L + Sbjct: 289 VNPRQGR-----VLSMLPAMLLYLIFFLLQTSLRSNASKGKLDPLVWLWAVNGAYLALAV 343 Query: 354 IKKKYTKI 361 + + + Sbjct: 344 LLNLWDSL 351 >gi|218692648|ref|YP_002400860.1| hypothetical protein ECED1_5114 [Escherichia coli ED1a] gi|218430212|emb|CAR11213.2| conserved hypothetical protein; putative inner membrane protein [Escherichia coli ED1a] gi|324005134|gb|EGB74353.1| putative inner membrane protein [Escherichia coli MS 57-2] Length = 366 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 54/364 (14%), Positives = 134/364 (36%), Gaps = 25/364 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ +I ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + + + + + + +F+ R Sbjct: 122 PWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKG 181 Query: 183 T--HKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F+ Y + Sbjct: 182 NARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++S L N + + R+E + R+T + L+ + Sbjct: 242 DPNDTDQMDMSTLWNTD----------TDRARAELNWRITLVFTVFMMALMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFLFCISSIFLLMI 354 RQ + +S+ + ++ F I ++ N P L+++ + + L ++ Sbjct: 290 NPRQGR-----VLSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIV 344 Query: 355 KKKY 358 + Sbjct: 345 LNLW 348 >gi|238798772|ref|ZP_04642243.1| Inner membrane protein yjgP [Yersinia mollaretii ATCC 43969] gi|238717404|gb|EEQ09249.1| Inner membrane protein yjgP [Yersinia mollaretii ATCC 43969] Length = 364 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 59/365 (16%), Positives = 128/365 (35%), Gaps = 27/365 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFSQKLVRILGAAVDGEIPTNLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G + +LI L LA+ S ++ + Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGMGKKSLIMAALILALGTSALAAVNTIWLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLY-IKISKYNPNNTLQGIFIVDSRDT 181 P ++ A+ + + L F D + I +F+ R Sbjct: 122 PWSSKHQDEVLNDARANPSLAALAGGQFKSSTDGNSALFIGNVT-GKEFNRVFLAQLRPN 180 Query: 182 QT--HKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + A SG + Q +ILN G + + + +D I F Y Sbjct: 181 GNQRPSVVVADSGHMTERPDGSQVVILNKGTRYEGTALLRDFRITDFVDYQAIIGHQEVQ 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 A + L N + R+EFH RLT + VI L+ + Sbjct: 241 QNSNVAEQMTMKQLWRSNEADA----------RAEFHWRLTLIVSVVIMALLVVP--LSA 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFLFCISSIFLLM 353 RQ + +S+ + ++ F + + N P+L+++ + + + + Sbjct: 289 VNPRQGR-----VLSMLPAMLLYLIFFLLQSSLRSNAGNGKLDPLLWMWTVNGTYLAIAV 343 Query: 354 IKKKY 358 I + Sbjct: 344 ILNLW 348 >gi|254445062|ref|ZP_05058538.1| putative permease, YjgP/YjgQ family [Verrucomicrobiae bacterium DG1235] gi|198259370|gb|EDY83678.1| putative permease, YjgP/YjgQ family [Verrucomicrobiae bacterium DG1235] Length = 388 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 60/389 (15%), Positives = 121/389 (31%), Gaps = 34/389 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQ-RINLVSSSTESLNILLKISGYLIPT 59 M YIL+ + S + S F+ + +++ +NL++ ++ +++ L P Sbjct: 1 MTLIHRYILKNVFVSCMASVAMFAFLILTMSLVKDMLNLLAEGQLTVGAFFRLTKLLFPF 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 V P F + ++ E+ + G S I L V LAIL + + Sbjct: 61 VFVYALPMGFITGALLTMGRLSAENEITSLRAAGVSVIRLSSSVFLLAILGTTASLVVNF 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-S 178 P ++ +Q ++ E F + I + K L ++I + Sbjct: 121 YYGPLAKTEYRQELKNTIQTNPLGFIVEKTFVKDFTGSVIYVGKKEAE-MLYDVWIWKLN 179 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILN---DGEV--HRKSPISKDISIMKFK-------SY 226 ++Q A+ G + L +G +R + ++ F + Sbjct: 180 SESQVTTFARAEKGRFAFLENSAELQLDAEGVTIEYRDAEDPENFRTRNFYPASAAKFPF 239 Query: 227 TLQTES-ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSE-----------FHK 274 + E T+ K L R E FHK Sbjct: 240 SFSLEKILGKETLARKLTWMTFDELQGEIRKYEGIAATATGAVREEALDNLLKAKMVFHK 299 Query: 275 RLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY 334 + F I+I K + +++ + I + + + I +E P Sbjct: 300 NFAMGFAVLSFACIAIPLGLKTS---RKETSANLGIGVGMGLLYYLA-MISIEWLEGRPD 355 Query: 335 YIP--ILYLFLFCISSIFLL-MIKKKYTK 360 P + ++ S I+ + K Sbjct: 356 LRPELLFWIPNLAYQSFGAWLFIRADHGK 384 >gi|148358635|ref|YP_001249842.1| permease [Legionella pneumophila str. Corby] gi|296108275|ref|YP_003619976.1| Predicted permease [Legionella pneumophila 2300/99 Alcoy] gi|148280408|gb|ABQ54496.1| permease [Legionella pneumophila str. Corby] gi|295650177|gb|ADG26024.1| Predicted permease [Legionella pneumophila 2300/99 Alcoy] Length = 359 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 52/373 (13%), Positives = 137/373 (36%), Gaps = 30/373 (8%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + + + +V I Q +Q +N +S + +++K+ +P ++ Sbjct: 2 IIFRYLTKEVFLTLIALTAILVLIFMSNQFIQYLNRAASGSIPGFVIMKLLMLELPNLMG 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + + +E+ ++ G L+K +A ++ + + I Sbjct: 62 LLLPLGFYVALLLAYGRLYAESEMTVLRACGYGPRQLLKHSFAMATVVLVVVAIVMIWAS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNT-LQGIFIVD--- 177 P +L + + F ++ + N +++ + IF+ Sbjct: 122 PVIAVERTKLIRSTGIKTLIQTIMPGRFHAINSGQQIFYVQSMNRDHSQAEQIFMAKHSV 181 Query: 178 SRDTQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 + + +A +++ Q I+L +G+ ++ P D I +F SY + + Sbjct: 182 QDNKLLWDVLWADKAFAEVNPQTGEEYIVLQNGKEYQGVPGHADYQIAEFASYKSKLPNP 241 Query: 234 NS--STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 + A ++L L N + +E R++ L + L+++ Sbjct: 242 TVVMNDDARTAKTRDLWPLNNHDLKK-----------AAELQWRISIPLMVLTLTLVAVP 290 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI---EQNPYYIPILYLFLFCISS 348 R R K + + F + F ++ + P++I + ++ + ++ Sbjct: 291 --LSRVSPRSGKYSKLLPAIIIYIF--YANFMFVSRDAIATGKIPWWIGMWWVHV-AVAI 345 Query: 349 IFLLMIKKKYTKI 361 + +L I + K+ Sbjct: 346 LGILFIWRNQVKL 358 >gi|194364315|ref|YP_002026925.1| permease YjgP/YjgQ family protein [Stenotrophomonas maltophilia R551-3] gi|194347119|gb|ACF50242.1| permease YjgP/YjgQ family protein [Stenotrophomonas maltophilia R551-3] Length = 360 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 53/361 (14%), Positives = 129/361 (35%), Gaps = 18/361 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L +SFL + + ++ ++ ++ + ++ +L G Sbjct: 1 MLKLDRYLLGDFVQSFLATLIVLLVVSVGGVLVDILGNIADGRLPAKLLFSQLGLQFIAY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP++ P + + + R++E+ +I G L++P+L L + + + Sbjct: 61 LPLILPLALMLGLLLAVARLYRDSEMAVITAIGVGPKRLLRPLLMLVLPVVALVGACSLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSR 179 + P +Q+ +A ++ + LE F L + + +S +P+ T L +F+ + Sbjct: 121 LGPWAGRVAEQMIIEANRSVLMAGLEPGRFTPLPNGGVVYLSSISPDGTRLGRVFLQ-RQ 179 Query: 180 DTQTHKIYYAQSGSIDLD---RQAIILNDGEVHRKSPISK-DISIMKFKSYTLQTESANS 235 ++ A G + + ++ + L+DG D + F + Sbjct: 180 KDDRLEVVSAAGGRMFFEGARQRFLELDDGHQVEGPVAGGLDYRLATFARNDVALPDGAQ 239 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + + L + +++ H+RL L + F L+++ Sbjct: 240 TRTENDPELMPTTKLF----------GDARPEAQAQLHRRLAPPLIALAFALLTVP--LG 287 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 R+ RQ++ + L+ G F L+ + + + M Sbjct: 288 RSSPRQQRYGRMMLALLAYMVGTNLMFIGSGWIATGKIPAALGLWWLTLPLLGLAIWMYA 347 Query: 356 K 356 + Sbjct: 348 R 348 >gi|198283963|ref|YP_002220284.1| permease YjgP/YjgQ family protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|198248484|gb|ACH84077.1| permease YjgP/YjgQ family protein [Acidithiobacillus ferrooxidans ATCC 53993] Length = 368 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 53/234 (22%), Positives = 104/234 (44%), Gaps = 6/234 (2%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 ++R + SFL++ L ++ I + Q+ Q + V+S L+I+L++ G +PT+L MV P Sbjct: 3 VVRNLTISFLLTSLVVLAILAIGQLTQLLRQVASGQLPLSIILRLLGLALPTLLVMVLPL 62 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 F V +++ R+ E++ I +TGT L+ PV +A + I P + Sbjct: 63 AFFFAVYLVFSNLYRSNEMVAIRSTGTGLSGLLPPVAVVAACVFCLELILSLSWAPGAQR 122 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN--TLQGIFIVDSRDTQTHK 185 ++ S + A + L+ F L I + + N Q IF+ ++ Q Sbjct: 123 ELQSESVRLANAAAEAMLQPGSFTNLPGGRVIYVGQAVGKNSHRFQEIFLSVAQGGQLDM 182 Query: 186 IYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 A G + + ++L DG+ + P ++ F Y + ++ ++ Sbjct: 183 A-TAAYGEVKPAQDGALTLVLVDGQRYLGQPGKAGFKVLSFARYRVLLDNQDTG 235 >gi|78222462|ref|YP_384209.1| permease YjgP/YjgQ [Geobacter metallireducens GS-15] gi|78193717|gb|ABB31484.1| permease YjgP/YjgQ [Geobacter metallireducens GS-15] Length = 359 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 69/364 (18%), Positives = 134/364 (36%), Gaps = 12/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI R F + + I VI L++I + + Y IP + Sbjct: 1 MSILTRYIASAYLRVFWLCLASFIAIYLVIDFLEKIGRFLRFDPQWIHVAQFFLYKIPEI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 V P M T L ++RN+E++ + + G S + P+L +A S+F+ +S + Sbjct: 61 ATQVIPLAVLMATLLTLGMLSRNSEIIAMRSCGVSLRKISAPILAIACAASLFVIVSNEL 120 Query: 121 IEPKCRSTIKQLSAK-AQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDS 178 I PK S ++ + + + ++L +N + D+ + ++P+ TL+G+ + Sbjct: 121 ILPKTYSQMRFIEEVLIRKKSSNTFLRQNNIWHKDNKAILMARAFDPDHQTLRGVTLWSF 180 Query: 179 RDTQTH-KIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + T + A+ GS D + + R + + S + Sbjct: 181 SEGMTPSRRIDAEQGSWDGGQWTLWKV---TVRDFQGGGVANTTQIASMPVNLNLQIEDL 237 Query: 238 IVLKANDQNLSFL-LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V+ N+ FL L Y ++ H +++ +I + I A + Sbjct: 238 KVVDKYADNMGFLKLREYIQKLKKGGYETTRYEAQMHSKISLPFASLIMAFLGIPFALRG 297 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN--PYYIPILYL-FLFCISSIFLLM 353 R I S+ F F + +I + P + +F +S I+L M Sbjct: 298 --SRSSGVALGIGASIGFGFAYFIINAILISFGQTGVLPSLVSAWAANVIFALSGIWLAM 355 Query: 354 IKKK 357 + Sbjct: 356 TLNR 359 >gi|260642684|ref|ZP_05416897.2| putative permease [Bacteroides finegoldii DSM 17565] gi|260621031|gb|EEX43902.1| putative permease [Bacteroides finegoldii DSM 17565] Length = 632 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 93/208 (44%), Gaps = 4/208 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K +++I++ F+ + +FI + + + ++ + ++++ + Y T+ Sbjct: 4 IKKLDIFIVKSFFMLFIGTFFICLFIFMMQFLWRYVDELVGKGLEMSVMAQFFFYSALTL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+ P + + + ELL + G S + +++P++F L F +N+ Sbjct: 64 VPVSLPLAVLLASLITFGNFGERYELLAMKAAGISLLKIMRPLVFFVCGLVGVSFYFQNV 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 + P ++ + L + + E +F+ D +KI+K + L + I + + Sbjct: 124 VGPIAQAKLGTLILSMKQKSPELDIPEGVFYSEIPDYNLKIAKKDRKTGMLYDVLIYNLK 183 Query: 180 DT-QTHKIYYAQSGSID--LDRQAIILN 204 D + I YA SG ++ D+Q + L+ Sbjct: 184 DGFENAHIIYADSGRLEMTADKQHLWLH 211 >gi|78184805|ref|YP_377240.1| permease [Synechococcus sp. CC9902] gi|78169099|gb|ABB26196.1| possible permease [Synechococcus sp. CC9902] Length = 384 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 56/365 (15%), Positives = 135/365 (36%), Gaps = 20/365 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + ++L I L + + I ++ + + + L++ IP+ Sbjct: 12 LSLLDRWLLAEIAAPLLFAVAAFTVLGLSIGVMFELARRLVDGLPILVALQLLLLNIPSF 71 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P T + ++ N+EL + + G S I L+ P L L+ILL+ F+ ++ Sbjct: 72 LVLSLPMATLFATLLAYSKLSSNSELTALRSLGVSTIRLVVPALALSILLTGLTFVFNDV 131 Query: 121 IEPKCRSTIKQLSAKAQLALTFS----YLEENLFFRLDDDLY---------IKISKYNPN 167 I P+ + + + + + N F ++ D + ++ Sbjct: 132 IVPRANTQAEITLQRGLGRALATERGKDITFNSFGKIYDPKTQTSSTGLRQLFYARRYEG 191 Query: 168 NTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKS-- 225 + + ++D +++ A+ + + +G+V +P + + + F Sbjct: 192 GEMLDVTLLDFSRADYRQMWIAERAVYNESKAMWEFFNGQVLTLNP-NGSTTRLAFDENF 250 Query: 226 YTLQTESANSSTIVLKANDQNLSFLLNPNP-NNPNYRPELLETYRSEFHKRLTQWLFPVI 284 Y L + + + AND LS ++ + + R ++ + + ++ Sbjct: 251 YPLSSGPLQVAELPDDANDMTLSQAISAEKVESNAGNIKAARKLRVRIQEKFSFPMACIV 310 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 FGLI + R R + +S+ + G ++ S + + P L +L Sbjct: 311 FGLIG-SSLGARPGSRTSRS-QGFGVSILLILG-YYALSVSFSSLGVSGILPPFLAAWLP 367 Query: 345 CISSI 349 + S+ Sbjct: 368 VLISL 372 >gi|325124204|gb|ADY83727.1| hypothetical protein BDGL_003141 [Acinetobacter calcoaceticus PHEA-2] Length = 350 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 54/340 (15%), Positives = 124/340 (36%), Gaps = 16/340 (4%) Query: 18 MSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVL 77 M + I ++++ + + +IL I GY +P L ++ P F + V Sbjct: 1 MVISLLTLIMMGGRLIKYFGVAAQGRLDASILFSIIGYRLPEFLTLILPLGFFIGLMLVF 60 Query: 78 TSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQ 137 + + E+ +++ +G SR L + ++ + ++ +F + + P ++L+ Sbjct: 61 GRLYVDHEMAVLNGSGVSRHQLARLLIPMTLVYMVFQSVLMLWMTPWGLREFEKLTTTQA 120 Query: 138 LALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDS--RDTQTHKIYYAQSGS- 193 + F + F I + + L+ IF ++ + + A+ + Sbjct: 121 VRTGFDLVRPREFISSGP-YTIYAGSLSEDRKNLKDIFFYQRAAKEDKPDVMILAKEATR 179 Query: 194 --IDLDRQAII-LNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFL 250 + D ++ L G + P + +F+SY L+ E+ + + Sbjct: 180 VEVANDTANVVDLVQGRRYEIFPGQPKYTQAEFQSYRLRLENDKDVKFESGDVEALSTTK 239 Query: 251 LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFI 310 L N+P RSE RL VI ++S+ ++ + ++ P Sbjct: 240 LFSKTNDP--------VIRSELGWRLFGPFTIVIALMLSVALSEVSPRQGRYYRLIPAIF 291 Query: 311 SLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 S + I K E + + P + + +++F Sbjct: 292 IFSSLIVLMIAIKTRISKEELDIWAYPAVLVVYGVAAALF 331 >gi|311104770|ref|YP_003977623.1| hypothetical protein AXYL_01570 [Achromobacter xylosoxidans A8] gi|310759459|gb|ADP14908.1| hypothetical protein AXYL_01570 [Achromobacter xylosoxidans A8] Length = 367 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 44/363 (12%), Positives = 132/363 (36%), Gaps = 12/363 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ ++ I + ++ + + +++ + + ++++ ++ T Sbjct: 1 MSLFKRSVVSEITSHAGVVFSTLLIVWLSVLLVRLLGEAAGGNIGADVVVVLAALSTITA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP + + +T R +E+++ +G S ++PVL +AI +++ + + Sbjct: 61 LPTILAVSVFIAVLTTVTRNYRESEMVVWFASGLSLADWLRPVLRVAIPVALAVAGLTLV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISK--YNPNNTLQGIFIVDS 178 P I + + + S + F + ++ P++ L +F ++ Sbjct: 121 AAPWAYRQIGEYHERFEQRSDLSKVTAGQFAESSGGNRVFFAEDPLTPSDELGNVFAREN 180 Query: 179 RDTQTHKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + + A + + ++L +G + P + +I ++ F Y L+ ES + Sbjct: 181 -GPEWLSVLTASKAHSETMPNGDRFLVLGEGHRYDLKPGTPEIRLVHFDKYGLRLESKSG 239 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLT-QWLFPVIFGLISIVAAD 294 V +A + P + + S+ R++ + L + A Sbjct: 240 GDPVAEARAN--AERSAKARTTPQLIADNTNSSWSQVMWRISLPLAALNLALLAIPLGAV 297 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 L R + + L + ++I + + ++ ++++ + ++ Sbjct: 298 NPRLGRSGDLLIAGLVGLLYMNLINLSRAWISNG---KLSFGLGVWAIHAAVAALTVFLL 354 Query: 355 KKK 357 ++ Sbjct: 355 MRR 357 >gi|307611507|emb|CBX01181.1| hypothetical protein LPW_28801 [Legionella pneumophila 130b] Length = 359 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 52/373 (13%), Positives = 136/373 (36%), Gaps = 30/373 (8%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + + + +V I Q +Q +N +S + +++K+ +P ++ Sbjct: 2 IIFRYLTKEVFLTLIALTAILVLIFMSNQFIQYLNRAASGSIPGFVIMKLLMLELPNLMG 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + + +E+ ++ G L+K +A ++ + + I Sbjct: 62 LLLPLGFYIALLLAYGRLYAESEMTVLRACGYGPRQLLKHSFAMATVVLVVVAIVMIWAS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNT-LQGIFIVD--- 177 P +L + + F ++ + N +++ + IF+ Sbjct: 122 PVIAVERTKLIRSTGIKTLIQTIMPGRFHAINSGQQIFYVQSMNRDHSQAEQIFMAKHSV 181 Query: 178 SRDTQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 + + +A +++ Q I+L +G+ ++ P D I +F SY + + Sbjct: 182 QDNKLLWDVLWADKAFAEVNPQTGEEYIVLQNGKEYQGVPGHADYQIAEFASYKSKLPNP 241 Query: 234 NS--STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 A ++L L N + +E R++ L + L+++ Sbjct: 242 TVVMHDDARTAKTRDLWPLNNHDLKK-----------AAELQWRISIPLMVLTLTLVAVP 290 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI---EQNPYYIPILYLFLFCISS 348 R R K + + F + F ++ + P++I + ++ + ++ Sbjct: 291 --LSRVSPRSGKYSKLLPAIIIYIF--YANFMFVSRDAIATGKIPWWIGMWWVHV-AVAI 345 Query: 349 IFLLMIKKKYTKI 361 + +L I + K+ Sbjct: 346 LGILFIWRNQVKL 358 >gi|209749454|gb|ACI73034.1| hypothetical protein ECs5238 [Escherichia coli] Length = 366 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 53/364 (14%), Positives = 134/364 (36%), Gaps = 25/364 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ +I ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + + L + F + + + + + + +F+ R Sbjct: 122 PWSSRHQDEVLAEAKANPSMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKG 181 Query: 183 T--HKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F+ Y + Sbjct: 182 NARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L N + + R+E + R+T + L+ + Sbjct: 242 DPNDTDQMDMRTLWNTD----------TDRARAELNWRITLVFTVFMMALMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFLFCISSIFLLMI 354 RQ + +S+ + ++ F I ++ N P L+++ + + L ++ Sbjct: 290 NPRQGR-----VLSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIV 344 Query: 355 KKKY 358 + Sbjct: 345 LNLW 348 >gi|327396302|dbj|BAK13724.1| inner membrane protein YjgP [Pantoea ananatis AJ13355] Length = 308 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 43/307 (14%), Positives = 109/307 (35%), Gaps = 25/307 (8%) Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + ++ P + L + +E+ ++ G S+ L+K + L + S+ ++ Sbjct: 1 MAQLILPLSLFLAILMTLGRLYTESEITVMHACGLSKAVLVKAAMVLMLFTSVVAAVNVI 60 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P +Q++ A+ + L F D + + N +F+ R Sbjct: 61 WLGPWSSRYQEQVTQNAKANPGAAALAAGQFQTSSDGSAVLFLENVKGNQFGHVFLAQLR 120 Query: 180 DTQT--HKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + A SG ++ + + L+ G + + +D I F +Y Sbjct: 121 PKGNARPSVVLADSGHMEQKKDGSQIVTLDKGTRFEGTALLRDFRITDFTNYQAYVGYKQ 180 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 ++ + + LL+ +R+E H R+T ++ L+ + Sbjct: 181 ATLDPNDVDQATFATLLS----------NKTPEFRAELHWRITLVFAVLVMALMVVP--L 228 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFLFCISSIFL 351 RQ + +S+ + ++ F + + + P +++++ IS + L Sbjct: 229 SVVNPRQGR-----VLSMLPAMLLYLIFFLLQSSLRSSGAKGRLDPAIWMWVVNISYLAL 283 Query: 352 LMIKKKY 358 ++ + Sbjct: 284 AIVLNLW 290 >gi|241765203|ref|ZP_04763187.1| permease YjgP/YjgQ family protein [Acidovorax delafieldii 2AN] gi|241365132|gb|EER60004.1| permease YjgP/YjgQ family protein [Acidovorax delafieldii 2AN] Length = 365 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 62/363 (17%), Positives = 142/363 (39%), Gaps = 16/363 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ I + + RSF + + +V + + +++ + S + S + ++ + G+ + LP Sbjct: 2 LFDSSIRKELARSFGATLVVLVTVVMTMMLIRTLGQASRGSVSPSDVMLVMGFTVLGQLP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VL+ M R++E++I + G I+L+ P+L A + + + + Sbjct: 62 IILSLSLFVAVVGVLSRMYRDSEMVIWFSGGRGLISLLPPLLRFAWPVMAVIALLSLGVW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNTL-QGIFIVDSRD 180 P + I++L + + + F + I K P+ + IFI S Sbjct: 122 PWANAQIQELKTRYEQRSDIDRIAPGEFQESANGSRVFFIDKDAPDTQVGNNIFIAASNG 181 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS-T 237 + A+S +++ + +L+ G+ S + I +F Y + A++S T Sbjct: 182 PKESVT-SARSARLEIRQGERFALLSQGQRLESSSDHPGLKISEFVEYGTRIGGASASAT 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD-KR 296 L + LL + +++E RL L + F ++ + A Sbjct: 241 EELAVKTRATHELLMQPA---------IPAFQAELGWRLGLALAAINFVILGLALASVNP 291 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R + + + + G S+I ++ +L+ ++ I L + Sbjct: 292 RAGRSGSMLFALLAFVVYYNLMTLGQSWIGAGKLGLLSFMLLLHGGTLIMAGIILAIRHN 351 Query: 357 KYT 359 +T Sbjct: 352 HWT 354 >gi|146308541|ref|YP_001189006.1| permease YjgP/YjgQ family protein [Pseudomonas mendocina ymp] gi|145576742|gb|ABP86274.1| permease YjgP/YjgQ family protein [Pseudomonas mendocina ymp] Length = 372 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 48/348 (13%), Positives = 122/348 (35%), Gaps = 25/348 (7%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ R + + ++ I + ++ + + +L I GY IP L ++ Sbjct: 5 RYLSREVLVTLSAVSAVLLVIIMSGRFIKYLAQAAQGALDPGVLFLIMGYRIPGFLQLIL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + + ++E+ ++ TG S+ L + A+++++ + + P+ Sbjct: 65 PLGLFLGFLLAYGRLYLDSEMTVLSATGVSQQRLTAYSMAPALIVALLVGWLSLGLAPQG 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPN-NTLQGIFIVDSR---- 179 +++ ++ + L F + D + + + + L+G+F+ + R Sbjct: 125 VASVARILNEQDALTELDTLVPGRFQSMKDGSRVTYSQELSADRSELRGVFMSEKRFSSD 184 Query: 180 --DTQTHKIYYAQSGS--IDLDRQ-AIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + + A+SG I D +IL +G + P D ++++ +Y + Sbjct: 185 GSSERGITVLLAESGRQEIQADGSRYLILENGYRYDGEPGEADYRVIQYDTYGVLLPKPE 244 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + + L + ++E RL+ L + L+++ Sbjct: 245 VAIEASEREAMPTRELFGSDDP----------RVQAELQWRLSIPLLVFVVTLLAVP--L 292 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 + RQ + + + + + G P L L+ Sbjct: 293 SKVNPRQGRFLKLLPAIF--LYMAYLGLLIAARGALDKGRLPPALGLW 338 >gi|91214820|ref|ZP_01251793.1| putative permease [Psychroflexus torquis ATCC 700755] gi|91187247|gb|EAS73617.1| putative permease [Psychroflexus torquis ATCC 700755] Length = 516 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 45/256 (17%), Positives = 96/256 (37%), Gaps = 16/256 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL ++FL ++ I + + + I + L I+ + +L+P + Sbjct: 1 MKILDRYILVSFVKTFLSVFTILMLIFILQSVWRFIEEFAGKDIDLEIISRFLLFLLPNL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +PMV P + + S E + + G S ++ ++ +LL F N Sbjct: 61 IPMVLPLTILLTSIMTFGSFAEQYEFAAMKSAGISLQRAMRSLIVFILLLGAVTFYFANT 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNT-LQGIFIVDS 178 + P + + + E F + ++ IK++K + P+ L + I Sbjct: 121 VIPYAEGKVLNMRKNIAQVKPSLAIIEGAFNDM-GNINIKVNKKSGPDGRNLDDVIIHKK 179 Query: 179 RDT--QTHKIYYAQSGSIDLDRQ----AIILNDGEVHRKSPISKDISIMK-------FKS 225 + + + A G ++ +++L DG + + P +K F Sbjct: 180 SENRVGNYTVIKADHGVLESAETSSVLSLVLYDGNYYDEVPTKTYQQKLKAPFVKSAFDK 239 Query: 226 YTLQTESANSSTIVLK 241 Y L + + + + L Sbjct: 240 YILNIDLSGFNDVDLD 255 Score = 36.1 bits (82), Expect = 8.2, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 30/95 (31%), Gaps = 4/95 (4%) Query: 255 PNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSI 314 N + LL H + +I V A A++R+ P+ I++ + Sbjct: 383 KNQFKRKEILLNKIEMAMHSKYALPFACIILF---FVGAPLGAIIRKGGLGLPMVIAVIV 439 Query: 315 SFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 + + + E P L +L I Sbjct: 440 FLTYHFIGLFAGNSAE-GGSLSPFLGSWLSTIILF 473 >gi|15804853|ref|NP_290894.1| hypothetical protein Z5873 [Escherichia coli O157:H7 EDL933] gi|15834492|ref|NP_313265.1| hypothetical protein ECs5238 [Escherichia coli O157:H7 str. Sakai] gi|16132083|ref|NP_418682.1| lipopolysaccharide export ABC permease of the LptBFGC export complex [Escherichia coli str. K-12 substr. MG1655] gi|26251170|ref|NP_757210.1| hypothetical protein c5362 [Escherichia coli CFT073] gi|30065452|ref|NP_839623.1| hypothetical protein S4489 [Shigella flexneri 2a str. 2457T] gi|56480551|ref|NP_709940.2| hypothetical protein SF4228 [Shigella flexneri 2a str. 301] gi|82546486|ref|YP_410433.1| hypothetical protein SBO_4179 [Shigella boydii Sb227] gi|89110977|ref|AP_004757.1| conserved inner membrane protein [Escherichia coli str. K-12 substr. W3110] gi|91213817|ref|YP_543803.1| hypothetical protein UTI89_C4868 [Escherichia coli UTI89] gi|110644620|ref|YP_672350.1| putative membrane protein YjgP [Escherichia coli 536] gi|117626605|ref|YP_859928.1| hypothetical protein APECO1_2133 [Escherichia coli APEC O1] gi|157163736|ref|YP_001461054.1| putative permease [Escherichia coli HS] gi|168749567|ref|ZP_02774589.1| putative permease [Escherichia coli O157:H7 str. EC4113] gi|168754843|ref|ZP_02779850.1| putative permease [Escherichia coli O157:H7 str. EC4401] gi|168760516|ref|ZP_02785523.1| putative permease [Escherichia coli O157:H7 str. EC4501] gi|168766552|ref|ZP_02791559.1| putative permease, YjgP/YjgQ family [Escherichia coli O157:H7 str. EC4486] gi|168774017|ref|ZP_02799024.1| putative permease [Escherichia coli O157:H7 str. EC4196] gi|168782788|ref|ZP_02807795.1| putative permease [Escherichia coli O157:H7 str. EC4076] gi|168784911|ref|ZP_02809918.1| putative permease, YjgP/YjgQ family [Escherichia coli O157:H7 str. EC869] gi|168797841|ref|ZP_02822848.1| putative permease [Escherichia coli O157:H7 str. EC508] gi|170021731|ref|YP_001726685.1| permease YjgP/YjgQ family protein [Escherichia coli ATCC 8739] gi|170083700|ref|YP_001733020.1| inner membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|170681521|ref|YP_001746665.1| putative permease [Escherichia coli SMS-3-5] gi|191170651|ref|ZP_03032203.1| putative permease [Escherichia coli F11] gi|193063666|ref|ZP_03044754.1| putative permease, YjgP/YjgQ family [Escherichia coli E22] gi|193069837|ref|ZP_03050787.1| putative permease [Escherichia coli E110019] gi|195937287|ref|ZP_03082669.1| inner membrane protein [Escherichia coli O157:H7 str. EC4024] gi|208807252|ref|ZP_03249589.1| putative permease [Escherichia coli O157:H7 str. EC4206] gi|208812743|ref|ZP_03254072.1| putative permease [Escherichia coli O157:H7 str. EC4045] gi|208819114|ref|ZP_03259434.1| putative permease [Escherichia coli O157:H7 str. EC4042] gi|209395855|ref|YP_002273806.1| putative permease [Escherichia coli O157:H7 str. EC4115] gi|209921758|ref|YP_002295842.1| hypothetical protein ECSE_4567 [Escherichia coli SE11] gi|215489603|ref|YP_002332034.1| conserved inner membrane protein [Escherichia coli O127:H6 str. E2348/69] gi|217324429|ref|ZP_03440513.1| putative permease [Escherichia coli O157:H7 str. TW14588] gi|218556808|ref|YP_002389722.1| hypothetical protein ECIAI1_4492 [Escherichia coli IAI1] gi|218561419|ref|YP_002394332.1| hypothetical protein ECS88_4848 [Escherichia coli S88] gi|218698009|ref|YP_002405676.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli 55989] gi|218707867|ref|YP_002415386.1| hypothetical protein ECUMN_4793 [Escherichia coli UMN026] gi|227886685|ref|ZP_04004490.1| inner membrane protein [Escherichia coli 83972] gi|237703936|ref|ZP_04534417.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|238903362|ref|YP_002929158.1| conserved inner membrane protein [Escherichia coli BW2952] gi|253775116|ref|YP_003037947.1| permease YjgP/YjgQ family protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254164186|ref|YP_003047296.1| inner membrane protein [Escherichia coli B str. REL606] gi|254796281|ref|YP_003081118.1| inner membrane protein [Escherichia coli O157:H7 str. TW14359] gi|256019913|ref|ZP_05433778.1| conserved inner membrane protein [Shigella sp. D9] gi|260847092|ref|YP_003224870.1| inner membrane protein [Escherichia coli O103:H2 str. 12009] gi|260871013|ref|YP_003237415.1| inner membrane protein [Escherichia coli O111:H- str. 11128] gi|261225380|ref|ZP_05939661.1| conserved inner membrane protein [Escherichia coli O157:H7 str. FRIK2000] gi|261255367|ref|ZP_05947900.1| inner membrane protein [Escherichia coli O157:H7 str. FRIK966] gi|291285673|ref|YP_003502491.1| Inner membrane protein yjgP [Escherichia coli O55:H7 str. CB9615] gi|293402886|ref|ZP_06646983.1| lipopolysaccharide export system permease lptF [Escherichia coli FVEC1412] gi|293407981|ref|ZP_06651821.1| conserved hypothetical protein [Escherichia coli B354] gi|293417761|ref|ZP_06660383.1| lipopolysaccharide export system permease lptF [Escherichia coli B185] gi|293476564|ref|ZP_06664972.1| lipopolysaccharide export system permease lptF [Escherichia coli B088] gi|297519576|ref|ZP_06937962.1| Inner membrane protein yjgP [Escherichia coli OP50] gi|298378412|ref|ZP_06988296.1| lipopolysaccharide export system permease lptF [Escherichia coli FVEC1302] gi|300818514|ref|ZP_07098723.1| putative inner membrane protein [Escherichia coli MS 107-1] gi|300821368|ref|ZP_07101516.1| putative inner membrane protein [Escherichia coli MS 119-7] gi|300899411|ref|ZP_07117666.1| putative inner membrane protein [Escherichia coli MS 198-1] gi|300906109|ref|ZP_07123828.1| putative inner membrane protein [Escherichia coli MS 84-1] gi|300923939|ref|ZP_07139949.1| putative inner membrane protein [Escherichia coli MS 182-1] gi|300950209|ref|ZP_07164150.1| putative inner membrane protein [Escherichia coli MS 116-1] gi|300957116|ref|ZP_07169357.1| putative inner membrane protein [Escherichia coli MS 175-1] gi|300972386|ref|ZP_07171919.1| putative inner membrane protein [Escherichia coli MS 45-1] gi|300988161|ref|ZP_07178581.1| putative inner membrane protein [Escherichia coli MS 200-1] gi|301024383|ref|ZP_07188071.1| putative inner membrane protein [Escherichia coli MS 69-1] gi|301050053|ref|ZP_07196965.1| putative inner membrane protein [Escherichia coli MS 185-1] gi|301304686|ref|ZP_07210794.1| putative inner membrane protein [Escherichia coli MS 124-1] gi|301643391|ref|ZP_07243441.1| putative inner membrane protein [Escherichia coli MS 146-1] gi|306815521|ref|ZP_07449670.1| Inner membrane protein yjgP [Escherichia coli NC101] gi|307140956|ref|ZP_07500312.1| Inner membrane protein yjgP [Escherichia coli H736] gi|309792902|ref|ZP_07687330.1| putative inner membrane protein [Escherichia coli MS 145-7] gi|331645010|ref|ZP_08346127.1| inner membrane protein YjgP [Escherichia coli H736] gi|331650394|ref|ZP_08351466.1| inner membrane protein YjgP [Escherichia coli M605] gi|331656095|ref|ZP_08357083.1| inner membrane protein YjgP [Escherichia coli M718] gi|331660842|ref|ZP_08361774.1| inner membrane protein YjgP [Escherichia coli TA206] gi|331665930|ref|ZP_08366824.1| inner membrane protein YjgP [Escherichia coli TA143] gi|331671402|ref|ZP_08372200.1| inner membrane protein YjgP [Escherichia coli TA280] gi|331680399|ref|ZP_08381058.1| inner membrane protein YjgP [Escherichia coli H591] gi|331681281|ref|ZP_08381918.1| inner membrane protein YjgP [Escherichia coli H299] gi|332281053|ref|ZP_08393466.1| conserved hypothetical protein [Shigella sp. D9] gi|84027984|sp|P0AFA0|LPTF_ECO57 RecName: Full=Lipopolysaccharide export system permease protein lptF gi|84027985|sp|P0AF99|LPTF_ECOL6 RecName: Full=Lipopolysaccharide export system permease protein lptF gi|84027986|sp|P0AF98|LPTF_ECOLI RecName: Full=Lipopolysaccharide export system permease protein lptF gi|84027987|sp|P0AFA1|LPTF_SHIFL RecName: Full=Lipopolysaccharide export system permease protein lptF gi|12519273|gb|AAG59460.1|AE005658_2 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933] gi|26111602|gb|AAN83784.1|AE016771_295 Hypothetical protein yjgP [Escherichia coli CFT073] gi|537103|gb|AAA97158.1| ORF_o366 [Escherichia coli str. K-12 substr. MG1655] gi|1790712|gb|AAC77218.1| lipopolysaccharide export ABC permease of the LptBFGC export complex [Escherichia coli str. K-12 substr. MG1655] gi|13364716|dbj|BAB38661.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai] gi|30043716|gb|AAP19435.1| hypothetical protein S4489 [Shigella flexneri 2a str. 2457T] gi|31323180|gb|AAP43524.1| YjgP [Escherichia coli B] gi|56384102|gb|AAN45647.2| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|81247897|gb|ABB68605.1| conserved hypothetical protein [Shigella boydii Sb227] gi|85677008|dbj|BAE78258.1| conserved inner membrane protein [Escherichia coli str. K12 substr. W3110] gi|91075391|gb|ABE10272.1| hypothetical protein UTI89_C4868 [Escherichia coli UTI89] gi|110346212|gb|ABG72449.1| putative membrane protein YjgP [Escherichia coli 536] gi|115515729|gb|ABJ03804.1| conserved hypothetical protein [Escherichia coli APEC O1] gi|157069416|gb|ABV08671.1| putative permease [Escherichia coli HS] gi|169756659|gb|ACA79358.1| permease YjgP/YjgQ family protein [Escherichia coli ATCC 8739] gi|169891535|gb|ACB05242.1| conserved inner membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|170519239|gb|ACB17417.1| putative permease [Escherichia coli SMS-3-5] gi|187770319|gb|EDU34163.1| putative permease [Escherichia coli O157:H7 str. EC4196] gi|188016154|gb|EDU54276.1| putative permease [Escherichia coli O157:H7 str. EC4113] gi|188999811|gb|EDU68797.1| putative permease [Escherichia coli O157:H7 str. EC4076] gi|189357793|gb|EDU76212.1| putative permease [Escherichia coli O157:H7 str. EC4401] gi|189364084|gb|EDU82503.1| putative permease, YjgP/YjgQ family [Escherichia coli O157:H7 str. EC4486] gi|189368987|gb|EDU87403.1| putative permease [Escherichia coli O157:H7 str. EC4501] gi|189374999|gb|EDU93415.1| putative permease, YjgP/YjgQ family [Escherichia coli O157:H7 str. EC869] gi|189379426|gb|EDU97842.1| putative permease [Escherichia coli O157:H7 str. EC508] gi|190908875|gb|EDV68462.1| putative permease [Escherichia coli F11] gi|192930653|gb|EDV83259.1| putative permease, YjgP/YjgQ family [Escherichia coli E22] gi|192956891|gb|EDV87344.1| putative permease [Escherichia coli E110019] gi|208727053|gb|EDZ76654.1| putative permease [Escherichia coli O157:H7 str. EC4206] gi|208734020|gb|EDZ82707.1| putative permease [Escherichia coli O157:H7 str. EC4045] gi|208739237|gb|EDZ86919.1| putative permease [Escherichia coli O157:H7 str. EC4042] gi|209157255|gb|ACI34688.1| putative permease [Escherichia coli O157:H7 str. EC4115] gi|209749448|gb|ACI73031.1| hypothetical protein ECs5238 [Escherichia coli] gi|209749450|gb|ACI73032.1| hypothetical protein ECs5238 [Escherichia coli] gi|209749452|gb|ACI73033.1| hypothetical protein ECs5238 [Escherichia coli] gi|209749456|gb|ACI73035.1| hypothetical protein ECs5238 [Escherichia coli] gi|209915017|dbj|BAG80091.1| conserved hypothetical protein [Escherichia coli SE11] gi|215267675|emb|CAS12133.1| conserved inner membrane protein [Escherichia coli O127:H6 str. E2348/69] gi|217320650|gb|EEC29074.1| putative permease [Escherichia coli O157:H7 str. TW14588] gi|218354741|emb|CAV01804.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli 55989] gi|218363577|emb|CAR01234.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli IAI1] gi|218368188|emb|CAR05996.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli S88] gi|218434964|emb|CAR15905.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli UMN026] gi|222036033|emb|CAP78778.1| Inner membrane protein yjgP [Escherichia coli LF82] gi|226901848|gb|EEH88107.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|227836258|gb|EEJ46724.1| inner membrane protein [Escherichia coli 83972] gi|238860249|gb|ACR62247.1| conserved inner membrane protein [Escherichia coli BW2952] gi|242379781|emb|CAQ34608.1| LptF, subunit of LptABCFG ABC transporter [Escherichia coli BL21(DE3)] gi|253326160|gb|ACT30762.1| permease YjgP/YjgQ family protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253976089|gb|ACT41760.1| conserved inner membrane protein [Escherichia coli B str. REL606] gi|253980245|gb|ACT45915.1| conserved inner membrane protein [Escherichia coli BL21(DE3)] gi|254595681|gb|ACT75042.1| conserved inner membrane protein [Escherichia coli O157:H7 str. TW14359] gi|257762239|dbj|BAI33736.1| inner membrane protein [Escherichia coli O103:H2 str. 12009] gi|257767369|dbj|BAI38864.1| inner membrane protein [Escherichia coli O111:H- str. 11128] gi|281181359|dbj|BAI57689.1| conserved hypothetical protein [Escherichia coli SE15] gi|281603540|gb|ADA76524.1| hypothetical protein SFxv_4611 [Shigella flexneri 2002017] gi|290765546|gb|ADD59507.1| Inner membrane protein yjgP [Escherichia coli O55:H7 str. CB9615] gi|291321017|gb|EFE60459.1| lipopolysaccharide export system permease lptF [Escherichia coli B088] gi|291429801|gb|EFF02815.1| lipopolysaccharide export system permease lptF [Escherichia coli FVEC1412] gi|291430479|gb|EFF03477.1| lipopolysaccharide export system permease lptF [Escherichia coli B185] gi|291472232|gb|EFF14714.1| conserved hypothetical protein [Escherichia coli B354] gi|294490862|gb|ADE89618.1| putative permease [Escherichia coli IHE3034] gi|298280746|gb|EFI22247.1| lipopolysaccharide export system permease lptF [Escherichia coli FVEC1302] gi|300298211|gb|EFJ54596.1| putative inner membrane protein [Escherichia coli MS 185-1] gi|300305971|gb|EFJ60491.1| putative inner membrane protein [Escherichia coli MS 200-1] gi|300316134|gb|EFJ65918.1| putative inner membrane protein [Escherichia coli MS 175-1] gi|300356989|gb|EFJ72859.1| putative inner membrane protein [Escherichia coli MS 198-1] gi|300396609|gb|EFJ80147.1| putative inner membrane protein [Escherichia coli MS 69-1] gi|300402052|gb|EFJ85590.1| putative inner membrane protein [Escherichia coli MS 84-1] gi|300410965|gb|EFJ94503.1| putative inner membrane protein [Escherichia coli MS 45-1] gi|300419817|gb|EFK03128.1| putative inner membrane protein [Escherichia coli MS 182-1] gi|300450449|gb|EFK14069.1| putative inner membrane protein [Escherichia coli MS 116-1] gi|300526257|gb|EFK47326.1| putative inner membrane protein [Escherichia coli MS 119-7] gi|300528918|gb|EFK49980.1| putative inner membrane protein [Escherichia coli MS 107-1] gi|300840036|gb|EFK67796.1| putative inner membrane protein [Escherichia coli MS 124-1] gi|301078221|gb|EFK93027.1| putative inner membrane protein [Escherichia coli MS 146-1] gi|305851183|gb|EFM51638.1| Inner membrane protein yjgP [Escherichia coli NC101] gi|307556431|gb|ADN49206.1| putative membrane protein YjgP [Escherichia coli ABU 83972] gi|307629337|gb|ADN73641.1| Inner membrane protein yjgP [Escherichia coli UM146] gi|308123188|gb|EFO60450.1| putative inner membrane protein [Escherichia coli MS 145-7] gi|309704765|emb|CBJ04116.1| putative permease [Escherichia coli ETEC H10407] gi|312948914|gb|ADR29741.1| inner membrane protein [Escherichia coli O83:H1 str. NRG 857C] gi|315255620|gb|EFU35588.1| putative inner membrane protein [Escherichia coli MS 85-1] gi|315288386|gb|EFU47784.1| putative inner membrane protein [Escherichia coli MS 110-3] gi|315293628|gb|EFU52980.1| putative inner membrane protein [Escherichia coli MS 153-1] gi|315298978|gb|EFU58232.1| putative inner membrane protein [Escherichia coli MS 16-3] gi|320639018|gb|EFX08664.1| lipopolysaccharide ABC transporter permease LptF [Escherichia coli O157:H7 str. G5101] gi|320644388|gb|EFX13453.1| lipopolysaccharide ABC transporter permease LptF [Escherichia coli O157:H- str. 493-89] gi|320649705|gb|EFX18229.1| lipopolysaccharide ABC transporter permease LptF [Escherichia coli O157:H- str. H 2687] gi|320655102|gb|EFX23063.1| lipopolysaccharide ABC transporter permease LptF [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320660608|gb|EFX28069.1| lipopolysaccharide ABC transporter permease LptF [Escherichia coli O55:H7 str. USDA 5905] gi|320665535|gb|EFX32581.1| lipopolysaccharide ABC transporter permease LptF [Escherichia coli O157:H7 str. LSU-61] gi|323380352|gb|ADX52620.1| permease YjgP/YjgQ family protein [Escherichia coli KO11] gi|323935383|gb|EGB31731.1| inner membrane protein yjgP [Escherichia coli E1520] gi|323950670|gb|EGB46548.1| inner membrane protein yjgP [Escherichia coli H252] gi|323955547|gb|EGB51311.1| inner membrane protein yjgP [Escherichia coli H263] gi|323965650|gb|EGB61104.1| inner membrane protein yjgP [Escherichia coli M863] gi|323975396|gb|EGB70497.1| inner membrane protein yjgP [Escherichia coli TW10509] gi|324013725|gb|EGB82944.1| putative inner membrane protein [Escherichia coli MS 60-1] gi|324019238|gb|EGB88457.1| putative inner membrane protein [Escherichia coli MS 117-3] gi|324118822|gb|EGC12714.1| inner membrane protein yjgP [Escherichia coli E1167] gi|331035985|gb|EGI08223.1| inner membrane protein YjgP [Escherichia coli H736] gi|331040788|gb|EGI12946.1| inner membrane protein YjgP [Escherichia coli M605] gi|331046449|gb|EGI18539.1| inner membrane protein YjgP [Escherichia coli M718] gi|331051884|gb|EGI23923.1| inner membrane protein YjgP [Escherichia coli TA206] gi|331056981|gb|EGI28975.1| inner membrane protein YjgP [Escherichia coli TA143] gi|331071247|gb|EGI42604.1| inner membrane protein YjgP [Escherichia coli TA280] gi|331071862|gb|EGI43198.1| inner membrane protein YjgP [Escherichia coli H591] gi|331081502|gb|EGI52663.1| inner membrane protein YjgP [Escherichia coli H299] gi|332103405|gb|EGJ06751.1| conserved hypothetical protein [Shigella sp. D9] Length = 366 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 53/364 (14%), Positives = 133/364 (36%), Gaps = 25/364 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ +I ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + + + + + + +F+ R Sbjct: 122 PWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKG 181 Query: 183 T--HKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F+ Y + Sbjct: 182 NARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L N + + R+E + R+T + L+ + Sbjct: 242 DPNDTDQMDMRTLWNTD----------TDRARAELNWRITLVFTVFMMALMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFLFCISSIFLLMI 354 RQ + +S+ + ++ F I ++ N P L+++ + + L ++ Sbjct: 290 NPRQGR-----VLSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIV 344 Query: 355 KKKY 358 + Sbjct: 345 LNLW 348 >gi|157147734|ref|YP_001455052.1| hypothetical protein CKO_03538 [Citrobacter koseri ATCC BAA-895] gi|157084939|gb|ABV14617.1| hypothetical protein CKO_03538 [Citrobacter koseri ATCC BAA-895] Length = 366 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 49/354 (13%), Positives = 122/354 (34%), Gaps = 17/354 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G SR L+K + LA+ + ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSRAVLVKAAMVLALFTGVVAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + + + + + + +F+ R Sbjct: 122 PWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSAVLFIESVDGSDFKDVFLAQIRPKG 181 Query: 183 T--HKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F++Y + Sbjct: 182 NARPSVVVADSGHLTQLRDGSQVVTLNKGTRFEGTALLRDFRITDFQNYQAIIGHQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L + N R+E H R+T + L+ + Sbjct: 242 DPNDTDQMDMRTLWQTDTN----------RARAELHWRITLVFTVFMMALMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 RQ + + + L S + + + ++ ++ + Sbjct: 290 NPRQGRVLSMLPAMLLYLLFFLLQTSLKSNGGKGKLDPVIWMWAVNLIYLALAV 343 >gi|91788272|ref|YP_549224.1| permease YjgP/YjgQ [Polaromonas sp. JS666] gi|91697497|gb|ABE44326.1| permease YjgP/YjgQ [Polaromonas sp. JS666] Length = 376 Score = 130 bits (327), Expect = 4e-28, Method: Composition-based stats. Identities = 53/335 (15%), Positives = 119/335 (35%), Gaps = 21/335 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ I + + RSF + + +V I I +++ + S + S ++ Y LP Sbjct: 2 LFQSSIRKELARSFGATLVVLVTIVMTIVLIRTLGQASRGSISPQDVMLFMAYSALGRLP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + + + L+ M R++E+++ +G +KP+ A + + + + + Sbjct: 62 TILTLSLFIAMVSTLSRMYRDSEMVVWFTSGQGLGGFLKPLFRFAWPVLLVIALMALFVW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN--PNNTLQGIFIVDSRD 180 P K + + + + F + + + +FI + + Sbjct: 122 PWANQQTKDMQNRYAQRGDLNRVAPGQFQESSSGNRVFFIDRDLASEQSSSNVFIA-ATE 180 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT-ESANSST 237 + A+SG I+ D Q ++L G+ + I F+ Y +T +SA Sbjct: 181 KGKSSVTTARSGRIETRGDAQFLMLEKGQRLENVVGQAALKISDFEEYGTRTGDSAYLGE 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +A + L+ E + E RL + V F ++++ A Sbjct: 241 RTPEAKLLSTRSLI----------KEPTRSNLGELAWRLGLAMAAVNFVILAVALASVNP 290 Query: 298 LVRQRKKIHPIFISLSIS-----FGVFWGFSYIIH 327 + + + ++ + G W F +I Sbjct: 291 RGGRSGNMIFVLLTFVVYNNLVNLGQSWIFVGLIS 325 >gi|218245029|ref|YP_002370400.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 8801] gi|218165507|gb|ACK64244.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 8801] Length = 395 Score = 130 bits (327), Expect = 4e-28, Method: Composition-based stats. Identities = 52/375 (13%), Positives = 131/375 (34%), Gaps = 24/375 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPT 59 + + YI + F+ + + + + N V S L L+I +P Sbjct: 22 LSLMDRYIGGQLITPFIFGVGLVSSLGVAIGYLSDLGNKVVDSNLPLIKALEILLLKVPE 81 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 P + T ++ ++EL+ + G S LI P L L++++S F+ Sbjct: 82 FTAYALPISVMLTTLLTYGRLSSDSELIALRACGVSLSRLIAPALALSLVVSGITFVFNE 141 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLF------FRLDDDLYI-------KISKYNP 166 ++ P + K + ++++F L + I +++ Sbjct: 142 LVVPTANYQATSILVKYLNEEHRFWQQKDIFYPDYEEISLPNGETIKRLKHLFYAEEFDG 201 Query: 167 NNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSY 226 N ++ + I++ +KI + S + + ++ +G +++ +P + FK Sbjct: 202 EN-MKALTILEWIGDSLNKIVISDSATWNANQNTWDFFNGNIYKIAPDASYKDTFGFKHR 260 Query: 227 TLQTESANSSTIVLKANDQNLSFLLNPNPNNPNY---RPELLETYRSEFHKRLTQWLFPV 283 A + N ++ + + L T++ ++++ V Sbjct: 261 QFPLSKAPFEFALQGRNPYEMNIIQAQEYTKLLKMIGDQKNLRTFQVRIQQKMSFPFICV 320 Query: 284 IFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YL 341 +FGLI V + + + I + ++ ++I + P + +L Sbjct: 321 VFGLIGSVLGARPQQMSRSTSFGLSVIII----FTYYVLGFLIGSLGLVGAISPFMAAWL 376 Query: 342 FLFCISSIFLLMIKK 356 F ++ ++ + Sbjct: 377 PNFIGLAVGGWLLYR 391 >gi|323960302|gb|EGB55943.1| inner membrane protein yjgP [Escherichia coli H489] Length = 366 Score = 130 bits (327), Expect = 4e-28, Method: Composition-based stats. Identities = 53/364 (14%), Positives = 133/364 (36%), Gaps = 25/364 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ +I ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + + + + + + +F+ R Sbjct: 122 PWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKG 181 Query: 183 T--HKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F+ Y + Sbjct: 182 NARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L N + + R+E + R+T + L+ + Sbjct: 242 DPNDTDQMDMRTLWNTD----------TDRARAELNWRITLVFTVFMMALMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFLFCISSIFLLMI 354 RQ + +S+ + ++ F I ++ N P L+++ + + L ++ Sbjct: 290 NPRQGR-----VLSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIV 344 Query: 355 KKKY 358 + Sbjct: 345 LNLW 348 >gi|299065988|emb|CBJ37169.1| putative permease, predicted YjgP/YjgQ family [Ralstonia solanacearum CMR15] Length = 372 Score = 130 bits (327), Expect = 4e-28, Method: Composition-based stats. Identities = 57/361 (15%), Positives = 127/361 (35%), Gaps = 20/361 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + L ++ +++ + + ++ S N +L + G L Sbjct: 2 IFEQALRRELSFTAGAVFLVLLTFMLTTLVIRILGMAANGEASPNDVLLLIGLAALGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT +++E+++ G S I+PVL ++ + + + Sbjct: 62 ILLCATLFISVLLVLTRWYKDSEMVVWFTAGLSLTDFIRPVLRFSLPFVVLVGLLALFGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYNPN-NTLQGIFIVDSRD 180 P + + S + F Y+ I + + +F+ ++ Sbjct: 122 PWANQQSALFRDRFEQRDVLSMISAGRFIEPAHGNYVLFIEGVDAGMKHARNLFVANAEQ 181 Query: 181 TQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANSS 236 + + A++G ++L+ G + +P D I++F Y ++ + + Sbjct: 182 DKIG-VALAKTGEFKAGPNGDRYVVLDKGRRYEGTPGQLDYRIVEFDRYGVKVANKPPQA 240 Query: 237 TIVLKANDQNLSFLL-NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA-D 294 L + + LL NP P N E R+ L + F LI+I A Sbjct: 241 DANLPTKSRPTTELLSNPTPENLG-----------ELVWRIGLPLLALNFVLIAIPLAYV 289 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 L R I + I L+ S + +++ ++L F +++ Sbjct: 290 NPRLGRYTPMIFAVLIYLTYSNLLNLSQAWVAQGKMSAMLAWWPIHLAAFVCAALLFRFR 349 Query: 355 K 355 Sbjct: 350 H 350 >gi|297182283|gb|ADI18452.1| predicted permeases [uncultured Oceanospirillales bacterium HF4000_13G19] Length = 354 Score = 130 bits (327), Expect = 4e-28, Method: Composition-based stats. Identities = 50/350 (14%), Positives = 129/350 (36%), Gaps = 26/350 (7%) Query: 17 LMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNV 76 ++ +V + + ++ + ++ + + L + + +P L M+ P + V Sbjct: 4 VLVTFILVMVLVSGRFIKYLAEAAAGQIAADALFLVMAFRLPEFLQMILPLSLYIAILLV 63 Query: 77 LTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKA 136 L M+ + E++++ G +++ ++ A++ + + + P+ + + ++ + Sbjct: 64 LGRMHMDNEMVVLRAGGQGDGRVVRSLIVPALVAMSVIALFALYVTPQGDAEVNRIFEEQ 123 Query: 137 QLALTFSYLEENLFFRLDDD---LYIKISKYN-PNNTLQGIFIVDSR----DTQTHKIYY 188 + L F DD N L+ +F+ D+ + + Sbjct: 124 KGRSVLELLTPGRFHVKGDDDNQRATYAESLNREEGVLENVFVADASFSSEEAGRLLTVW 183 Query: 189 AQSGSIDLDR--QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 A+SG++ + L DG ++ P D + F+ ++ S SS+ + ++ Sbjct: 184 ARSGNLVQQDGISYLELTDGYQYQGKPGEADYREVAFEKARVRIGSERSSSRPPEVRGRS 243 Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 L++ + +E R + L I L ++ R RQ + + Sbjct: 244 TLDLID----------DGGNQAMAELAWRWSLVLTVPIMCLAAVP--LSRVNPRQGRFLR 291 Query: 307 PIFISLSISFGVFWGFSY----IIHKIEQNPYYIPILYLFLFCISSIFLL 352 I L V + + P+Y ++++ L ++F+L Sbjct: 292 MIPAVLGYMLYVGLLLTMRSWIAEVPGSERPWYYSMVWIHLIAGFAVFML 341 >gi|113868946|ref|YP_727435.1| permease [Ralstonia eutropha H16] gi|113527722|emb|CAJ94067.1| predicted permease [Ralstonia eutropha H16] Length = 375 Score = 130 bits (327), Expect = 4e-28, Method: Composition-based stats. Identities = 51/366 (13%), Positives = 128/366 (34%), Gaps = 23/366 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + + R + + L ++ +++ + + +S S N +L + G L Sbjct: 2 ILQQALRRELAYTAGAVFLVMLTFMLTSLVIRILGMAASGKASPNDVLMLIGLATIGYLS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT +++E+++ + G S L+KPVL A + + Sbjct: 62 ILLSATLFISTLIVLTRWYKDSEMVVWFSAGISLRELVKPVLQFAAPFIVLALLLGMFAW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIKISKYNPN-NTLQGIFIVDSRD 180 P + + S + F + + I + + + +F+ + + Sbjct: 122 PWANQQSALFRDRFEQRGVMSMIAAGRFIEPAKANYVLFIEGIDADMKHARNVFVA-NSE 180 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANSS 236 + A G + + +++ +G + P D I++F+ Y ++ ++ A S Sbjct: 181 ADKIGVALAHQGKFETMPNGDRLVVMENGRRYSGMPGQIDYRIVEFERYAVKVDNKAPES 240 Query: 237 TIVLKANDQNLSFLL-NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 L ++ L+ NP N E R++ + F +I+I A Sbjct: 241 EAKLPPKSRDTIELIRNPTRENLG-----------ELIWRISLPILAFNFVMIAIPLA-- 287 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIFLLMI 354 + + + P+ ++ I + + + + + LL+ Sbjct: 288 -YVNPRLGRYTPLVFAVLIYLTYSNLINLTQSWVRSGAIPFWLAWWPIHLAVFLGALLLF 346 Query: 355 KKKYTK 360 + + + Sbjct: 347 RYRQNR 352 >gi|120611822|ref|YP_971500.1| permease [Acidovorax citrulli AAC00-1] gi|120590286|gb|ABM33726.1| permease YjgP/YjgQ family protein [Acidovorax citrulli AAC00-1] Length = 365 Score = 130 bits (327), Expect = 4e-28, Method: Composition-based stats. Identities = 50/322 (15%), Positives = 125/322 (38%), Gaps = 16/322 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ I + + RSF + + +V + + +++ + S + + + ++ + G+ + LP Sbjct: 2 LFDSSIRKELARSFGATLVVLVTVVMTMMLIRTLGQASRGSVNPSDVMLVMGFTVLGQLP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + + L M R +E++I +G + L+ P+L A + + + +I Sbjct: 62 TILTLSLFVAVVGTLARMYRESEMVIWFASGRGMLHLLPPLLRFAWPVILAIATLALLIW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNN-TLQGIFIVDSRD 180 P I+QL + + + F + I + P+N +FI + + Sbjct: 122 PWANQQIQQLKVQYEQRSDVDRIAPGEFQESANGARVFFIDRETPDNQQATNVFIASN-E 180 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + A+S ++ +++ +L+DG+ S + + +F Y + A SS+ Sbjct: 181 HGRETVTSARSARLETRGNQRMALLSDGQRLETSLDKPGLKVSEFSEYGTRIGGAASSSS 240 Query: 239 VLKA-NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 A ++ + L ++P +R+E R + F ++ + A Sbjct: 241 DDGAVKTRSTAQLFA--SSDP--------VFRAELGWRFGLAFAALNFVVLGLAVASANP 290 Query: 298 LVRQRKKIHPIFISLSISFGVF 319 + + + + + + Sbjct: 291 RAARSTSLVFALFAFVVYYNLM 312 >gi|189485654|ref|YP_001956595.1| permease YjgP/YjgQ family protein [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287613|dbj|BAG14134.1| permease YjgP/YjgQ family protein [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 384 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 67/386 (17%), Positives = 136/386 (35%), Gaps = 37/386 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K LY ++ SFL+ + + + + ++L S S ++LK+ + +P + Sbjct: 2 IKKLHLYTIKESFGSFLLGVAVFSILFILDYVFELVDLFLSKGVSFFLVLKLFAFALPNI 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P ++ + E+ + ++G + TL P++ L ++S FL + Sbjct: 62 LRLAIPMSVLFGILIAYGKLSEDNEITAMKSSGVNYRTLSLPIIILVCIISSFLLFFNHF 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIV--- 176 + P S L + E L + + +K N NNTL + I Sbjct: 122 LSPAMNSNFVNLYREILTKKPLIKFTEKTTIELGE-YRLYANKVNRKNNTLYEVSIYKFE 180 Query: 177 ----------DSRDTQTHKI---------YYAQSGSIDL--DRQAIILNDGEVHRKS-PI 214 D + + A S + + + DG + + Sbjct: 181 NKDDYCYGYNDEKSDKKSLFLQNNSKAWRIAASSAKVKSYQNGTQFFIYDGYWQKANFSD 240 Query: 215 SKDISIMKFKSYTLQTESANS-STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFH 273 +++ M FKSY S+ L ++++ +L + EF Sbjct: 241 INNMTHMTFKSYCFFIPSSEVMKEQTLSMSEKSSPEILK-TIKTCKEQDIPFTANEIEFW 299 Query: 274 KRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP 333 R L P+ F LI++ + K +SLSI + + E+ Sbjct: 300 IRWIYALAPISFVLIALPIGIMAG---KDGKTIGFGMSLSIILVYYMLLILALILSEKE- 355 Query: 334 YYIP---ILYLFLFCISSIFLLMIKK 356 Y+P I++L +++ + + K Sbjct: 356 -YVPANLIMWLPNITVTAAGICLFTK 380 >gi|302338545|ref|YP_003803751.1| permease YjgP/YjgQ family protein [Spirochaeta smaragdinae DSM 11293] gi|301635730|gb|ADK81157.1| permease YjgP/YjgQ family protein [Spirochaeta smaragdinae DSM 11293] Length = 381 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 65/372 (17%), Positives = 132/372 (35%), Gaps = 20/372 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + Y+L+ SF ++ +F FI +V Q+L V S + +L + Y +P +L Sbjct: 11 RIADAYLLKEFFFSFCIAFIFFFFIFFVNQLLLLAEEVLSKRVGVTKVLLLILYSLPAIL 70 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PF + T + + + E+ G S + L PV+ L ++LS F S +++ Sbjct: 71 AFTFPFSALLGTVMAIGRFSSDNEITAFRALGVSHLRLFFPVMLLGLILSGISFFSNDVL 130 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ +L + LE R D + ++ + + + I+D + Sbjct: 131 LPRGTVQFGRLYRDILYSNPALELEPYAVRRYKD--TVLVTGAISDREISDLVILDHDED 188 Query: 182 QTHKIYYAQSGSIDLDRQ-----AIILNDGEVHRKSPISKDISIMKFKS--YTLQTESAN 234 Q ++ A+ ++ D + ++ L + H D + Y + S Sbjct: 189 QNERMLSAKRAYLEQDEKENGVISLRLEEVFGHTAKKREGDFDYFTADTMEYNILLSSFT 248 Query: 235 SSTIVLKANDQNLSFLL---------NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIF 285 S L + + + L N L+ Y+ EF+K+L L F Sbjct: 249 YSINNLTPREMSTAALYGEIQTMEAKKKEDQNKKRFDRTLQLYKIEFYKKLAIPLGCFTF 308 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC 345 + A R + + + + +F + ++ Sbjct: 309 MFFAFPAGLLPK--RSGRWVGFVLGLFAAAFYWMLLIVGQTLGVRFQVSAALAMWFPNIF 366 Query: 346 ISSIFLLMIKKK 357 I+ I LL+ + Sbjct: 367 IAFIGLLIYLSR 378 >gi|237741965|ref|ZP_04572446.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13] gi|256845305|ref|ZP_05550763.1| conserved hypothetical protein [Fusobacterium sp. 3_1_36A2] gi|229429613|gb|EEO39825.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13] gi|256718864|gb|EEU32419.1| conserved hypothetical protein [Fusobacterium sp. 3_1_36A2] Length = 359 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 60/346 (17%), Positives = 123/346 (35%), Gaps = 13/346 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YIL + +++ FI + ++ + + S+ +L++ + IP + Sbjct: 1 MKIINKYILDELKGPIILAVFVFTFIFLLDIVVTMMEHIIVKGISVFDVLRLLSFYIPPI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + T +RN+E + + +TG S ++KP+L +AI SIF+ + Sbjct: 61 LTQTIPIGMFLGIMICFTKFSRNSESVAMVSTGMSIRDILKPILAIAIGASIFIIFLQES 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P+ +K + AK L+E F D+ I + K + + + I + + Sbjct: 121 IIPRSFIKLKYVGAKIAYENPVFQLKEKTFIDNLDEYSIYVDKVSSDGKAKNIIAFEKPE 180 Query: 181 TQT--HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 + + + AII+ + + K I F + + + + Sbjct: 181 DKNKFPMVLTGEEAFWK--DSAIIVKESQFVSFDETGKKNLIGTFDEKKVVLTAYFQDLN 238 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + +++ L+ + Y+ E ++L V +I Sbjct: 239 IKIKDVEALSITDLIKGIKKIEATE---VIKYKIEIFRKLALVFSTVPLAVIGFCL---- 291 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 +L R FI I + F I + P + + Sbjct: 292 SLGHHRISKKYSFILAMIIIFAYIIFLNIGIVMASAGKLNPFIATW 337 >gi|294807984|ref|ZP_06766761.1| putative membrane protein [Bacteroides xylanisolvens SD CC 1b] gi|294444797|gb|EFG13487.1| putative membrane protein [Bacteroides xylanisolvens SD CC 1b] Length = 638 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 92/208 (44%), Gaps = 4/208 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K +++I++ F+ + +FI + + + ++ + ++++ + Y T+ Sbjct: 10 IKKLDIFIVKSFLMLFIGTFFICLFIFMMQFLWRYVDELVGKGLEMSVMAQFFFYSALTL 69 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+ P + + + ELL + G S + +++P+ F L F +N+ Sbjct: 70 VPVSLPLAVLLASLITFGNFGERYELLAMKAAGISLLKIMRPLAFFVCGLVGVSFYFQNV 129 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 + P ++ + L + + E +F+ D +K++K N L + I + Sbjct: 130 VGPIAQAKLGTLILSMKQKSPELDIPEGVFYSEIKDYNLKVAKKNRKTGMLYDVLIYSMK 189 Query: 180 DT-QTHKIYYAQSGSID--LDRQAIILN 204 D + +I YA SG ++ D+Q + L+ Sbjct: 190 DGFEKARIIYADSGRLEMTADKQHLWLH 217 Score = 35.7 bits (81), Expect = 10.0, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 46/85 (54%), Gaps = 6/85 (7%) Query: 265 LETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSY 324 + +++E+HK++T L ++F I A ++R+ P+ +S+ + F +++ Sbjct: 372 IRKHKTEWHKKITISLSCLLFFFIG---APLGGIIRKGGLGMPVIVSV-LVFIIYYIIDN 427 Query: 325 IIHKIEQNPYYIPILYLFLFCISSI 349 +K+ ++ +I +++ ++ S++ Sbjct: 428 TGYKMARDGKWI--VWMGMWTSSAV 450 >gi|194426540|ref|ZP_03059094.1| putative permease [Escherichia coli B171] gi|300928087|ref|ZP_07143635.1| putative inner membrane protein [Escherichia coli MS 187-1] gi|194415279|gb|EDX31547.1| putative permease [Escherichia coli B171] gi|300463884|gb|EFK27377.1| putative inner membrane protein [Escherichia coli MS 187-1] gi|323940179|gb|EGB36373.1| inner membrane protein yjgP [Escherichia coli E482] Length = 366 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 54/364 (14%), Positives = 133/364 (36%), Gaps = 25/364 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ +I I+ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAINVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + + + + + + +F+ R Sbjct: 122 PWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKG 181 Query: 183 T--HKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F+ Y + Sbjct: 182 NARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L N + + R+E + R+T + L+ + Sbjct: 242 DPNDTDQMDMRTLWNTD----------TDRARAELNWRITLVFTVFMMALMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFLFCISSIFLLMI 354 RQ + +S+ + ++ F I ++ N P L+++ + + L ++ Sbjct: 290 NPRQGR-----VLSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIV 344 Query: 355 KKKY 358 + Sbjct: 345 LNLW 348 >gi|218702964|ref|YP_002410593.1| hypothetical protein ECIAI39_4734 [Escherichia coli IAI39] gi|218372950|emb|CAR20831.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli IAI39] Length = 366 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 54/364 (14%), Positives = 134/364 (36%), Gaps = 25/364 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + S N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDSDIPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ +I ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + + + + + + +F+ R Sbjct: 122 PWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKG 181 Query: 183 T--HKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F+ Y + Sbjct: 182 NARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L N + + R+E + R+T + L+ + Sbjct: 242 DPNDTDQMDMRTLWNTD----------TDRARAELNWRITLVFTVFMMALMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFLFCISSIFLLMI 354 RQ + +S+ + ++ F I ++ N P L+++ + + L ++ Sbjct: 290 NPRQGR-----VLSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIV 344 Query: 355 KKKY 358 + Sbjct: 345 LNLW 348 >gi|82779327|ref|YP_405676.1| hypothetical protein SDY_4285 [Shigella dysenteriae Sd197] gi|81243475|gb|ABB64185.1| conserved hypothetical protein [Shigella dysenteriae Sd197] Length = 366 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 53/364 (14%), Positives = 133/364 (36%), Gaps = 25/364 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ +I ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAIILAVFTAIVAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + + + + + + +F+ R Sbjct: 122 PWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKG 181 Query: 183 T--HKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F+ Y + Sbjct: 182 NARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L N + + R+E + R+T + L+ + Sbjct: 242 DPNDTDQMDMRTLWNTD----------TDRARAELNWRITLVFTVFMMALMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFLFCISSIFLLMI 354 RQ + +S+ + ++ F I ++ N P L+++ + + L ++ Sbjct: 290 NPRQGR-----VLSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIV 344 Query: 355 KKKY 358 + Sbjct: 345 LNLW 348 >gi|257058053|ref|YP_003135941.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 8802] gi|256588219|gb|ACU99105.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 8802] Length = 395 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 53/375 (14%), Positives = 132/375 (35%), Gaps = 24/375 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPT 59 + + YI + F+ + + + + N V S L L+I +P Sbjct: 22 LSLMDRYIGGQLITPFIFGVGLVSSLGVAIGYLSDLGNKVVDSNLPLIKALEILLLKVPE 81 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 P + T ++ ++EL+ + G S LI P L L++++S F+ Sbjct: 82 FTAYALPISVMLTTLLTYGRLSSDSELIALRACGVSLSRLIAPALALSLVVSGITFVFNE 141 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLF------FRLDDDLYI-------KISKYNP 166 ++ P + K + ++++F L + I +++ Sbjct: 142 LVVPTANYQATSILVKYLNEEHRFWQQKDIFYPDYEEISLPNGETIKRLKHLFYAEEFDG 201 Query: 167 NNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSY 226 N ++ + I++ +KI + S + + ++ +G +++ +P + FK Sbjct: 202 EN-MKALTILEWIGDSLNKIVISDSATWNANQNTWDFFNGNIYKIAPDASYKDTFGFKHR 260 Query: 227 TLQTESANSSTIVLKANDQNLSFLLNPNPNNPNY---RPELLETYRSEFHKRLTQWLFPV 283 L A + N ++ + + L T++ ++++ V Sbjct: 261 QLPLSKAPFEFALQGRNPYEMNIIQAQEYTKLLKMIGDQKNLRTFQVRIQQKMSFPFICV 320 Query: 284 IFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YL 341 +FGLI V + + + I + ++ ++I + P + +L Sbjct: 321 VFGLIGSVLGARPQQMSRSTSFGLSVIII----FTYYVLGFLIGSLGLVGAISPFMAAWL 376 Query: 342 FLFCISSIFLLMIKK 356 F ++ ++ + Sbjct: 377 PNFIGLAVGGWLLYR 391 >gi|194437844|ref|ZP_03069939.1| putative permease [Escherichia coli 101-1] gi|256025197|ref|ZP_05439062.1| hypothetical protein E4_17633 [Escherichia sp. 4_1_40B] gi|260858413|ref|YP_003232304.1| inner membrane protein [Escherichia coli O26:H11 str. 11368] gi|301325194|ref|ZP_07218718.1| putative inner membrane protein [Escherichia coli MS 78-1] gi|331671169|ref|ZP_08372002.1| inner membrane protein YjgP [Escherichia coli TA271] gi|194423340|gb|EDX39332.1| putative permease [Escherichia coli 101-1] gi|257757062|dbj|BAI28564.1| inner membrane protein [Escherichia coli O26:H11 str. 11368] gi|300847955|gb|EFK75715.1| putative inner membrane protein [Escherichia coli MS 78-1] gi|323945994|gb|EGB42032.1| inner membrane protein yjgP [Escherichia coli H120] gi|323970485|gb|EGB65744.1| inner membrane protein yjgP [Escherichia coli TA007] gi|331061758|gb|EGI33684.1| inner membrane protein YjgP [Escherichia coli TA271] Length = 366 Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats. Identities = 53/364 (14%), Positives = 133/364 (36%), Gaps = 25/364 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ +I ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + + + + + + +F+ R Sbjct: 122 PWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKG 181 Query: 183 T--HKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F+ Y + Sbjct: 182 NARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L N + + R+E + R+T + L+ + Sbjct: 242 DPNDTDQMDMCTLWNTD----------TDRARAELNWRITLVFTVFMMALMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFLFCISSIFLLMI 354 RQ + +S+ + ++ F I ++ N P L+++ + + L ++ Sbjct: 290 NPRQGR-----VLSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIV 344 Query: 355 KKKY 358 + Sbjct: 345 LNLW 348 >gi|330504705|ref|YP_004381574.1| permease YjgP/YjgQ family protein [Pseudomonas mendocina NK-01] gi|328918991|gb|AEB59822.1| permease YjgP/YjgQ family protein [Pseudomonas mendocina NK-01] Length = 374 Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats. Identities = 55/357 (15%), Positives = 129/357 (36%), Gaps = 27/357 (7%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ R + + ++ I + ++ + + +L I GY IP L ++ Sbjct: 5 RYLSREVLVTLSAVSAVLLVIIMSGRFIKYLAQAAQGVLDPGVLFLIMGYRIPGFLQLIL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + + ++E+ ++ TG S+ L + A+++++ + + P+ Sbjct: 65 PLGLFLGFLLAYGRLYLDSEMTVLSATGVSQQRLTAYSMAPALIVALLVGWLSLGLAPQG 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPN-NTLQGIFIV------D 177 +++ ++ ++ L F L D + +P+ + L+G+F+ D Sbjct: 125 VASVARILSEQDALTELDTLVPGRFQSLRDGSRVTYSQELSPDRSELRGVFMSEKRFSTD 184 Query: 178 SRDTQTHKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 R + + A+SG D + +IL +G + P D +++ +Y + Sbjct: 185 GRSERGITVLVAESGRQEIQDDGSRYLILENGYRYDGEPGEADYRAIQYDTYGVLLPKPE 244 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + + LL ++P ++E RL+ L I L+++ Sbjct: 245 VAIEASEREATPTRELLG--SSDP--------RMQAELQWRLSLPLLVFIVTLLAVP--L 292 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + RQ + + + + + G L L+ + IFL Sbjct: 293 SKVNPRQGRFLKLLPAIF--LYMAYLGLLIAARGALDKGRLPAAL--GLWWVHGIFL 345 >gi|238793061|ref|ZP_04636690.1| Inner membrane protein yjgP [Yersinia intermedia ATCC 29909] gi|238727661|gb|EEQ19186.1| Inner membrane protein yjgP [Yersinia intermedia ATCC 29909] Length = 364 Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats. Identities = 56/365 (15%), Positives = 129/365 (35%), Gaps = 27/365 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFSQKLVRILGAAVDGEIPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G + +LI L LA+ S ++ + Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGMGKKSLIMAALILALFTSALAAVNTIWLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLY-IKISKYNPNNTLQGIFIVDSRDT 181 P ++ A+ + + L F D + I +F+ R Sbjct: 122 PWSSKHQDEVLNDARANPSLAALAGGQFKSSTDGNSALFIGNVT-GREFNRVFLAQLRPN 180 Query: 182 QT--HKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + A SG + Q +ILN G + + + +D I F Y Sbjct: 181 GNQRPSVVVADSGHMTERPDGSQVVILNKGTRYEGTALLRDFRITDFVDYQAIIGHQEVQ 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 A ++ L N + R+EFH RLT + +I L+ + Sbjct: 241 QNNNVAEQMSMKQLWRANQPDT----------RAEFHWRLTLIVSVIIMALLVVP--LSV 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFLFCISSIFLLM 353 RQ + +S+ + ++ F + + N P +++++ + + + + Sbjct: 289 VNPRQGR-----VLSMLPAMLLYLIFFLLQSSLRSNAGNGKLDPFIWMWIVNGAYLAVAV 343 Query: 354 IKKKY 358 + + Sbjct: 344 VLNLW 348 >gi|270157967|ref|ZP_06186624.1| putative permease [Legionella longbeachae D-4968] gi|289163766|ref|YP_003453904.1| Predicted membrane protein [Legionella longbeachae NSW150] gi|269989992|gb|EEZ96246.1| putative permease [Legionella longbeachae D-4968] gi|288856939|emb|CBJ10753.1| Predicted membrane protein [Legionella longbeachae NSW150] Length = 359 Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats. Identities = 55/370 (14%), Positives = 131/370 (35%), Gaps = 24/370 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + + + +V I Q++Q +N +S + I++K+ +PT+L Sbjct: 2 IIFRYLAKEVLITLISLTSILVLIFLSNQLIQYLNRAASGSIPGVIIMKLMMLELPTLLC 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + + +E+ ++ G L+K L +A ++ + I Sbjct: 62 LLIPLGFYIAMLLAYGRLYAESEMTVLRACGYGPNKLLKHSLIMATVVGFIVAIVMIWGS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNNT-LQGIFIVDS-- 178 P +L + + F +++ + + ++T + +F+ Sbjct: 122 PLIYIERAKLLRSTGIQTLVQTIMPGRFHAINEGKEVFYVQSMSRDHTKAEQVFLAKRTT 181 Query: 179 -RDTQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 D + +A + D + IIL +G+ ++ P D I +F Y + Sbjct: 182 VDDKTRWDVLWADQAFAETDPKTGEDYIILQNGKEYQGVPGHADYQIAEFGEYKARLPHP 241 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 V+K ++ + + N +E R + + LI++ Sbjct: 242 -----VVKISEDFRTI----STANLFPFNNTDRAKAAELQWRFSVPIMVFALTLIAV--- 289 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY--IPILYLFLFCISSIFL 351 + + K + ++ I + V+ +I + L+ CI + L Sbjct: 290 PLSRINPRSGKFAKLLPAI-IIYIVYANLLFIARDAMVSGKMPQWLGLWWVHLCIIAFGL 348 Query: 352 LMIKKKYTKI 361 +I + K+ Sbjct: 349 WLIWRNQAKL 358 >gi|160885006|ref|ZP_02066009.1| hypothetical protein BACOVA_03003 [Bacteroides ovatus ATCC 8483] gi|156109356|gb|EDO11101.1| hypothetical protein BACOVA_03003 [Bacteroides ovatus ATCC 8483] Length = 632 Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 92/208 (44%), Gaps = 4/208 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K +++I++ F+ + +FI + + + ++ + ++++ + Y T+ Sbjct: 4 IKKLDIFIVKSFLMLFIGTFFICLFIFMMQFLWRYVDELVGKGLEMSVMAQFFFYSALTL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+ P + + + ELL + G S + +++P+ F L F +N+ Sbjct: 64 VPVSLPLAVLLASLITFGNFGERYELLAMKAAGISLLKIMRPLAFFVCGLVGVSFYFQNV 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 + P ++ + L + + E +F+ D +K++K N L + I + Sbjct: 124 VGPIAQAKLGTLILSMKQKSPELDIPEGVFYSEIKDYNLKVAKKNRKTGMLYDVLIYSMK 183 Query: 180 DT-QTHKIYYAQSGSID--LDRQAIILN 204 D + +I YA SG ++ D+Q + L+ Sbjct: 184 DGFEKARIIYADSGRLEMTADKQHLWLH 211 >gi|237712765|ref|ZP_04543246.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262409745|ref|ZP_06086283.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|229447177|gb|EEO52968.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262352398|gb|EEZ01500.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|295084616|emb|CBK66139.1| Predicted permeases [Bacteroides xylanisolvens XB1A] Length = 632 Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 92/208 (44%), Gaps = 4/208 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K +++I++ F+ + +FI + + + ++ + ++++ + Y T+ Sbjct: 4 IKKLDIFIVKSFLMLFIGTFFICLFIFMMQFLWRYVDELVGKGLEMSVMAQFFFYSALTL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+ P + + + ELL + G S + +++P+ F L F +N+ Sbjct: 64 VPVSLPLAVLLASLITFGNFGERYELLAMKAAGISLLKIMRPLAFFVCGLVGVSFYFQNV 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 + P ++ + L + + E +F+ D +K++K N L + I + Sbjct: 124 VGPIAQAKLGTLILSMKQKSPELDIPEGVFYSEIKDYNLKVAKKNRKTGMLYDVLIYSMK 183 Query: 180 DT-QTHKIYYAQSGSID--LDRQAIILN 204 D + +I YA SG ++ D+Q + L+ Sbjct: 184 DGFEKARIIYADSGRLEMTADKQHLWLH 211 >gi|332880892|ref|ZP_08448562.1| permease, YjgP/YjgQ family [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332681066|gb|EGJ53993.1| permease, YjgP/YjgQ family [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 633 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 88/224 (39%), Gaps = 6/224 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K ++++ + F+ + +FI + + + ++ + +L++L Y T+ Sbjct: 4 IKKIDIFVFKAYSLLFVGTFFICLFIFMMQFMWRYVDELIGKGLTLDVLAHFFYYAGLTL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +PM P + + ++ ELL + G I +++P++ ILL I F +N+ Sbjct: 64 IPMSLPLAILLASLITFGNLGERFELLSMKAAGIPLIRILQPIIIFNILLCIGSFYFQNV 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSR 179 P+ + L + + E +F+ I + K N L G+ I + Sbjct: 124 TGPEAQKKFYTLIYSMKQKSPELEIPEGIFYSEIPGYNIFVEKKGKENGMLYGVMIYSTT 183 Query: 180 DT-QTHKIYYAQSGSIDLDRQ----AIILNDGEVHRKSPISKDI 218 D + +I A S + + + GE R ++ Sbjct: 184 DGYEDAQIVLADSAELKTTADEKHLMLTMYAGERFRNMQAQGNM 227 Score = 43.4 bits (101), Expect = 0.061, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 56/142 (39%), Gaps = 8/142 (5%) Query: 219 SIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRP--ELLETYRSEFHKRL 276 + F + Q + +I+ A ++ + + T+ E+HK+ Sbjct: 317 QTLNFDTLYSQLTVSQQQSILRNAMQKSTVATNEYEFRGLISKDIDQSTRTHWVEWHKKF 376 Query: 277 TQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 T L + F I A A++R+ P+ IS++I F ++ + K+ ++ ++ Sbjct: 377 TLSLACLFFFFIG---APLGAIIRKGGLGVPVVISVTI-FIFYYIINVSGEKMAKSGEWV 432 Query: 337 PIL--YLFLFCISSIFLLMIKK 356 P +L + I + + K Sbjct: 433 PWFGEWLSSMVLCPIGIFLTYK 454 >gi|299147702|ref|ZP_07040765.1| putative permease [Bacteroides sp. 3_1_23] gi|298513885|gb|EFI37771.1| putative permease [Bacteroides sp. 3_1_23] Length = 638 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 92/208 (44%), Gaps = 4/208 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K +++I++ F+ + +FI + + + ++ + ++++ + Y T+ Sbjct: 10 IKKLDIFIVKSFLMLFIGTFFICLFIFMMQFLWRYVDELVGKGLEMSVMAQFFFYSALTL 69 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+ P + + + ELL + G S + +++P+ F L F +N+ Sbjct: 70 VPVSLPLAVLLASLITFGNFGERYELLAMKAAGISLLKIMRPLAFFVCGLVGVSFYFQNV 129 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 + P ++ + L + + E +F+ D +K++K N L + I + + Sbjct: 130 VGPIAQAKLGTLILSMKQKSPELDIPEGVFYSEIKDYNLKVAKKNRKTGMLYDVLIYNMK 189 Query: 180 DT-QTHKIYYAQSGSID--LDRQAIILN 204 D + I YA SG ++ D+Q + L+ Sbjct: 190 DGFENAHIIYADSGRLEMTADKQHLWLH 217 Score = 36.1 bits (82), Expect = 9.8, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 46/85 (54%), Gaps = 6/85 (7%) Query: 265 LETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSY 324 + +++E+HK++T L ++F I A ++R+ P+ +S+ + F +++ Sbjct: 372 IRKHKTEWHKKITISLSCLLFFFIG---APLGGIIRKGGLGMPVIVSV-LVFIIYYIIDN 427 Query: 325 IIHKIEQNPYYIPILYLFLFCISSI 349 +K+ ++ +I +++ ++ S++ Sbjct: 428 TGYKMARDGKWI--VWMGMWTSSAV 450 >gi|239948137|ref|ZP_04699890.1| putative permease [Rickettsia endosymbiont of Ixodes scapularis] gi|239922413|gb|EER22437.1| putative permease [Rickettsia endosymbiont of Ixodes scapularis] Length = 233 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 43/237 (18%), Positives = 102/237 (43%), Gaps = 12/237 (5%) Query: 129 IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYY 188 +K + + S +EE F ++ D+ + I K + N + G+ I D+R+ + + Sbjct: 1 LKSRLSFIKNNYISSMIEEKTFNKVTKDITVFIDKKSAGNIMNGVIIFDNRNADNPSVVF 60 Query: 189 AQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS-----STIVLK 241 A SG+++ + LN G ++ +++ + F S ++ ++ N + + Sbjct: 61 AGSGTLNIYDNSPIFELNKGIRQEYD-VNGNLTQLTFDSLMIKLQNDNPLVSQRTKHNKE 119 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 AN+ +S LL P P++ ++ +E H+R+ L+ + +++ + ++ Sbjct: 120 ANEYYISELLAP-PHDLAITKKI--KLIAEAHQRIIWPLYNFVLPFLALAVFLRYPYSKK 176 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + +F +L++ F + + +N +I Y L I L + +K Sbjct: 177 TTFMPVLFSALTVLLVTSIHF-ILQNFASKNLDFIFACYSNLVIALMIGLYLFVRKR 232 >gi|238761816|ref|ZP_04622790.1| Inner membrane protein yjgP [Yersinia kristensenii ATCC 33638] gi|238699930|gb|EEP92673.1| Inner membrane protein yjgP [Yersinia kristensenii ATCC 33638] Length = 364 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 57/365 (15%), Positives = 129/365 (35%), Gaps = 27/365 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFSQKLVRILGAAVDGEIPTNLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G + +LI L LA++ S ++ + Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGMGKKSLIMAALILALITSALASVNTIWLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLY-IKISKYNPNNTLQGIFIVDSRDT 181 P ++ A+ + + L F D + I +F+ R Sbjct: 122 PWSSKHQDEVLNDARANPSLAALAGGQFKSSTDGNSALFIGNVT-GKEFNRVFLAQLRPN 180 Query: 182 QT--HKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + A SG + Q +ILN G + + + +D I F Y Sbjct: 181 GNQRPSVVVADSGHMIERPDGSQVVILNKGTRYEGTALLRDFRITDFVDYQAIIGHQEVQ 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 A + L + N + R+EFH RLT + +I L+ + Sbjct: 241 QNNNVAEQMTMKQLWDSNKPDA----------RAEFHWRLTLIVSVIIMALLVVP--LSV 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFLFCISSIFLLM 353 RQ + +S+ + ++ F + + N P+++++ + + + Sbjct: 289 VNPRQGR-----VLSMLPAMLLYLIFFLLQSSLRSNASGGKLDPLIWMWAVNGVYLAVAV 343 Query: 354 IKKKY 358 I + Sbjct: 344 ILNLW 348 >gi|19704366|ref|NP_603928.1| hypothetical protein FN1031 [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296327426|ref|ZP_06869973.1| YjgP/YjgQ family permease [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|19714618|gb|AAL95227.1| Hypothetical membrane-spanning protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296155439|gb|EFG96209.1| YjgP/YjgQ family permease [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 359 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 52/329 (15%), Positives = 119/329 (36%), Gaps = 6/329 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YIL + +++ FI + ++ + + S+ +L++ + IP + Sbjct: 1 MKIINKYILDELKGPIILAVFVFTFIFLLDIVVTMMEHIIVKGISVFDVLRLLSFYIPPI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + T +RN+E + + +TG S ++KP+L +AI SIF+ + Sbjct: 61 LTQTIPIGMFLGIMICFTKFSRNSESVAMVSTGMSIRDILKPILAIAIGASIFIVFLQES 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P+ +K + K L+E F D+ I + + + + + I + + Sbjct: 121 IIPRSFIKLKYVGTKIAYENPVFQLKEKTFIDNLDEYSIYVDEVSSDGKAKNIIAFEKPE 180 Query: 181 TQT--HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + + AII+ + + K + F + + + Sbjct: 181 DKNKFPMVLTGEEAFWK--DSAIIIKESQFVSFDEKGKKNLVGTFDEKRVVLTAY-FQDL 237 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI-VAADKRA 297 +K D +++ + Y+ E ++L V +I ++ Sbjct: 238 NIKIKDVEALSIIDLIKGLKKVEATEVIKYKIEIFRKLALVFSTVPLAVIGFCLSLGHHR 297 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYII 326 + ++ + + I + + G Sbjct: 298 ISKKYSFVLAMIIVFAYIIFLNIGIVMAT 326 >gi|17547135|ref|NP_520537.1| hypothetical protein RSc2416 [Ralstonia solanacearum GMI1000] gi|17429437|emb|CAD16123.1| putative permease transmembrane protein [Ralstonia solanacearum GMI1000] Length = 372 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 60/359 (16%), Positives = 124/359 (34%), Gaps = 21/359 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + L ++ +++ + + ++ S N +L + G L Sbjct: 2 IFEQALRRELSFTAGAVFLVLLTFMLTTLVIRILGMAANGEASPNDVLLLIGLAALGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT +++E+++ G S I+PVL ++ + + + Sbjct: 62 ILLCATLFISVLLVLTRWYKDSEMVVWFTAGLSLTDFIRPVLRFSLPFVVLVGLLALFGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYNPN-NTLQGIFIVDSRD 180 P + + S + F Y+ I + + +F+ ++ Sbjct: 122 PWANQQSALFRDRFEQRDVLSMISAGRFIEPAHGNYVLFIEGVDAGMKHARNLFVANAEQ 181 Query: 181 TQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANSS 236 + + A++G ++L+ G + +P D I++F Y ++ + + Sbjct: 182 DKIG-VALAKTGEFKAGPNGDRYVVLDKGRRYEGTPGQLDYRIVEFDRYGVKVANKPPQA 240 Query: 237 TIVLKANDQNLSFLL-NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA-D 294 L + + LL NP P N E R+ L + F LI+I A Sbjct: 241 DANLPTKSRPTTELLSNPTPENMG-----------ELVWRIGLPLLALNFVLIAIPLAYV 289 Query: 295 KRALVRQRKKIHPIFISLSIS-FGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 L R I + I L+ S K+ + PI C +F Sbjct: 290 NPRLGRYTPMIFAVLIYLTYSNLLNLSQAWVAQGKMSAMLAWWPIHLAAFVCAGLLFRF 348 >gi|123969132|ref|YP_001009990.1| putative permease [Prochlorococcus marinus str. AS9601] gi|123199242|gb|ABM70883.1| possible permease [Prochlorococcus marinus str. AS9601] Length = 401 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 60/379 (15%), Positives = 132/379 (34%), Gaps = 29/379 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + ++L I L + I+ V + I + L + LK+ + +P+ L Sbjct: 25 LIDRWLLGQIIPPMLFAISAFTVISLSVGVMFDLIRKIVEYGLPLFLALKVLFFSLPSFL 84 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + T ++ N+ELL + + G +I P + L+I ++ F + + Sbjct: 85 VLSFPMAVLLSTLLAYGKLSSNSELLALKSLGIKTSRIISPAIALSIFMTGLTFYFNDNL 144 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEEN-----LFFRLDDDL---------------YIKI 161 PK + + S+ EE +F R + +I Sbjct: 145 VPKSNKLA---ETTLRAGIGSSFSEEKGKENIMFSRYGSRINSETKKPTKNNSKLTHIFY 201 Query: 162 SKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIM 221 S++ N ++ + ++D +I A SG D + I ++G + + +I Sbjct: 202 SQWYENKIMKNVTVLDFSREDFQQILKANSGRFDKKSSSWIFSNGSIVSIDSGGQTTNI- 260 Query: 222 KFKSYTLQTESAN--SSTIVLKANDQNLSFLLNPNPNNPNYRP-ELLETYRSEFHKRLTQ 278 +FK Y + + AN+ L + + + + ++ T Sbjct: 261 QFKEYKYPFVEGPMELAKVPKDANEMTLKQAIQAEKIYKKTGNLKEVRRMKVRIQEKFTL 320 Query: 279 WLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 ++FGLI + ++ +R K + I F + ++ I Sbjct: 321 PFACLVFGLIG-SSLGSKSNLRSSKSQGFGLSVILILIYYVMSFIFSSFGVKGILPPIFA 379 Query: 339 LYLFLFCISSIFLLMIKKK 357 +L + + +++K Sbjct: 380 AWLPVLISLGGGIYLLRKS 398 >gi|58040480|ref|YP_192444.1| hypothetical protein GOX2052 [Gluconobacter oxydans 621H] gi|58002894|gb|AAW61788.1| Hypothetical transmembrane protein [Gluconobacter oxydans 621H] Length = 393 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 56/365 (15%), Positives = 133/365 (36%), Gaps = 18/365 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y+L + F ++ L ++ + ++L + ++S+ SL + + L+P Sbjct: 16 ILDRYLLTQMAPPFAIALLAMLIALLLERLLSLFDYLASAGSSLGTCIALLTDLLPHYFG 75 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + + M+ N E+ + S + + +P + + +LL I+ Sbjct: 76 IALPAALCIAVFLTIRGMSDNNEIDALQAGRVSLMRISRPFMIVGLLLGAASVFLYGYIQ 135 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSRDT 181 P R + A+ +L+ +F + + T L+ +FI + Sbjct: 136 PVARYDYRAGFYFAEHTGWAPHLQAGMFASTSSKAVMTADSVSHAGTRLRRVFIREVNAN 195 Query: 182 QTHKIYYAQSGSIDLDRQA----IILNDGEVHR---KSPISKDISIMKFKSYTLQTESAN 234 I A++G++ + + + L +GE+ ++ ++ F+ + N Sbjct: 196 GVAHIITARTGALTISEKTRSTRLDLWNGEIVDDPFQATKPHKPTVTHFEHVVRVIDRPN 255 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLE--TYRSEFHKRLTQWLFPVIFGLISIVA 292 T L ++ Y +E T R+E R+ + + I +A Sbjct: 256 KETSFRSRGADERELTLFELAHDLRYGLPGIEYRTLRAEMDFRMAR---AIAIPFIPPLA 312 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY--IPILYL--FLFCISS 348 R+RK + + I++++ F H + +++ LFC+ Sbjct: 313 VALAISARRRKSVWGL-IAVAVILIGFDQTLMFGHSLASTGRLPIWLAIWVPELLFCVGC 371 Query: 349 IFLLM 353 + L+ Sbjct: 372 LAALL 376 >gi|188495933|ref|ZP_03003203.1| putative permease [Escherichia coli 53638] gi|188491132|gb|EDU66235.1| putative permease [Escherichia coli 53638] Length = 366 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 53/364 (14%), Positives = 133/364 (36%), Gaps = 25/364 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ +I ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + + + + + + +F+ R Sbjct: 122 PWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKG 181 Query: 183 T--HKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F+ Y + Sbjct: 182 NARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGYQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L N + + R+E + R+T + L+ + Sbjct: 242 DPNDTDQMDMRTLWNTD----------TDRARAELNWRITLVFTVFMMALMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFLFCISSIFLLMI 354 RQ + +S+ + ++ F I ++ N P L+++ + + L ++ Sbjct: 290 NPRQGR-----VLSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIV 344 Query: 355 KKKY 358 + Sbjct: 345 LNLW 348 >gi|74314740|ref|YP_313159.1| hypothetical protein SSON_4446 [Shigella sonnei Ss046] gi|254037284|ref|ZP_04871361.1| conserved hypothetical protein [Escherichia sp. 1_1_43] gi|300916357|ref|ZP_07133099.1| putative inner membrane protein [Escherichia coli MS 115-1] gi|300935933|ref|ZP_07150886.1| putative inner membrane protein [Escherichia coli MS 21-1] gi|73858217|gb|AAZ90924.1| conserved hypothetical protein [Shigella sonnei Ss046] gi|226840390|gb|EEH72392.1| conserved hypothetical protein [Escherichia sp. 1_1_43] gi|284924431|emb|CBG37556.1| putative permease [Escherichia coli 042] gi|300416317|gb|EFJ99627.1| putative inner membrane protein [Escherichia coli MS 115-1] gi|300458869|gb|EFK22362.1| putative inner membrane protein [Escherichia coli MS 21-1] Length = 366 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 53/364 (14%), Positives = 132/364 (36%), Gaps = 25/364 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ +I ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + + + + + + +F+ R Sbjct: 122 PWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKG 181 Query: 183 T--HKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F+ Y Sbjct: 182 NARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVVL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L N + + R+E + R+T + L+ + Sbjct: 242 DPNDTDQMDMRTLWNTD----------TDRARAELNWRITLVFTVFMMALMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFLFCISSIFLLMI 354 RQ + +S+ + ++ F I ++ N P L+++ + + L ++ Sbjct: 290 NPRQGR-----VLSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIV 344 Query: 355 KKKY 358 + Sbjct: 345 LNLW 348 >gi|218551558|ref|YP_002385350.1| hypothetical protein EFER_4343 [Escherichia fergusonii ATCC 35469] gi|218359100|emb|CAQ91761.1| conserved hypothetical protein; putative inner membrane protein [Escherichia fergusonii ATCC 35469] gi|324112114|gb|EGC06092.1| inner membrane protein yjgP [Escherichia fergusonii B253] Length = 366 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 50/356 (14%), Positives = 123/356 (34%), Gaps = 17/356 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ I I+ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKGVLVKAAMILALFTGIVAAINVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + + + + + + +F+ R Sbjct: 122 PWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSAVLFIESVDGSDFKDVFLAQIRPKG 181 Query: 183 T--HKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F+ Y + Sbjct: 182 NARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + +++ L N + + R+E + RLT + L+ + Sbjct: 242 DPNDTDQMDMTTLWNTDSD----------RARAELNWRLTLIFTVFMMALMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 RQ + + + L S + + ++ ++ + + Sbjct: 290 NPRQGRVLSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIAL 345 >gi|315922632|ref|ZP_07918872.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313696507|gb|EFS33342.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 632 Score = 129 bits (325), Expect = 7e-28, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 92/208 (44%), Gaps = 4/208 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K +++I++ F+ + +FI + + + ++ + ++++ + Y T+ Sbjct: 4 IKKLDIFIVKSFLMLFIGTFFICLFIFMMQFLWRYVDELVGKGLEMSVMAQFFFYSALTL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+ P + + + ELL + G S + +++P+ F L F +N+ Sbjct: 64 VPVSLPLAVLLASLITFGNFGERYELLAMKAAGISLLKIMRPLAFFVCGLVGVSFYFQNV 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 + P ++ + L + + E +F+ D +K++K N L + I + + Sbjct: 124 VGPIAQAKLGTLILSMKQKSPELDIPEGVFYSEIKDYNLKVAKKNRKTGMLYDVLIYNMK 183 Query: 180 DT-QTHKIYYAQSGSID--LDRQAIILN 204 D + I YA SG ++ D+Q + L+ Sbjct: 184 DGFENAHIIYADSGRLEMTADKQHLWLH 211 >gi|90021020|ref|YP_526847.1| queuine tRNA-ribosyltransferase [Saccharophagus degradans 2-40] gi|89950620|gb|ABD80635.1| permease YjgP/YjgQ [Saccharophagus degradans 2-40] Length = 360 Score = 129 bits (325), Expect = 7e-28, Method: Composition-based stats. Identities = 57/351 (16%), Positives = 129/351 (36%), Gaps = 21/351 (5%) Query: 14 RSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMET 73 S L L ++ I + + + ++ +LL + Y +P L ++ P + Sbjct: 1 MSMLAVSLILLLIIISARFVTYLAEAAAGELDGGVLLTLMTYRLPAYLELILPLGLFLGI 60 Query: 74 TNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLS 133 + +E+ ++ G S+ LI + +++ + + + P+ ++L Sbjct: 61 LMAYGRLYLESEMTVLHACGLSQGKLIGFTMVSTFVVACVVGVFSLYLGPEGVRASEKLL 120 Query: 134 AKAQLALTFSYLEENLFFRLDDDLYI-KISKYNPN-NTLQGIFIV----DSRDTQTHKIY 187 A+ + F L+ F LD I + + LQ +F+ DS D + Sbjct: 121 AEQRNRTDFETLKPARFHELDGGSGISYAESISDDKQKLQKVFMAKLAPDSVDDDL-TVL 179 Query: 188 YAQSGSIDLDR----QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 A+SG +D + ++L +G + P + +++FK+++ + + K Sbjct: 180 TAESGETVVDAETGVKYLLLKNGRRYVGRPGEVNYKVVEFKTFSQILPEPDYEAVKPKKE 239 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 LS R+ RL+ + ++ GL+++ R RQ + Sbjct: 240 TDGLS--------TAQLFERDTLAARAALQWRLSLPVLVMVVGLLAVP--LSRTQPRQGR 289 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + L F + + + +I +L++ + LL+I Sbjct: 290 YAKMLPAILLYIFYLVCVNGARGAIEDGSAPFIGLLWVVHGAFFCLALLLI 340 >gi|224586302|ref|YP_002640101.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224470830|gb|ACN48660.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 359 Score = 129 bits (325), Expect = 7e-28, Method: Composition-based stats. Identities = 52/351 (14%), Positives = 125/351 (35%), Gaps = 22/351 (6%) Query: 9 LRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFC 68 +R +S L ++ I + ++++ + N++L + G +P + ++ P Sbjct: 1 MRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLS 60 Query: 69 FAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRST 128 + L + +E+ ++ G S+ L+K + LA+ I ++ P Sbjct: 61 LFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMVLALFTGILAAVNVMWAGPWSSKH 120 Query: 129 IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT--HKI 186 ++ A+A+ + L + F + + + + + +F+ R + Sbjct: 121 QDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFHDVFLAQIRPKGNARPSV 180 Query: 187 YYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 A SG + Q + LN G + + +D I F++Y + + Sbjct: 181 VVADSGHLTQLRDGSQVVTLNKGTRFEGTALLRDFRITDFQNYQAIIGHQAVALDPNDTD 240 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 ++ L N + + R+E H R+T + L+ + RQ + Sbjct: 241 QMDMRTLWNTDND----------RARAELHWRITLVFTVFMMALMVVP--LSVVNPRQGR 288 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 +S+ + ++ F I I+ N + + ++ L + Sbjct: 289 -----VLSMLPAMLLYLLFFLIQTSIKSNGGKGKLDPVIWMWAVNLIYLAL 334 >gi|254446201|ref|ZP_05059677.1| putative permease, YjgP/YjgQ family [Verrucomicrobiae bacterium DG1235] gi|198260509|gb|EDY84817.1| putative permease, YjgP/YjgQ family [Verrucomicrobiae bacterium DG1235] Length = 392 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 68/383 (17%), Positives = 142/383 (37%), Gaps = 35/383 (9%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQ-RINLVSSSTESLNILLKISGYLIPTVL 61 F YIL + + L + L FI + + ++ +++ ++ ++ G L+P V Sbjct: 2 LFHRYILWNVAVTSLGAILMFAFIVLLGEFMRDLFGMLAEGQVTVGTCFRLVGLLLPYVF 61 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + ++ E++ + +G S L V+FLAIL + Sbjct: 62 VHALPMGLLTGIMISMGRLSSQGEVVALRASGVSIARLASSVVFLAILGVVTSIAVNFEF 121 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + A+A ++ F + + + L+ ++I D Sbjct: 122 GPRAINAYRGEIAEAVRTGPLRFIIPRKFVKDFPGFVVYAGAKEDD-VLRELWIWKLDDG 180 Query: 182 QTHK-IYYAQSGSIDLDR----QAIILNDGEV-HRKSPISKDISIM----KFKSYTLQTE 231 + A+SG+++LD ++L G + S +D S + F S+ L E Sbjct: 181 GRTTSLIKAESGTLELDEYEQTLRLLLRSGSIAKMDSKDPEDFSEIRGELSFGSFPL--E 238 Query: 232 SANSSTIVLKAND---------------QNLSFLLNPNPNNPNYR--PELLETYRSEFHK 274 S + K + L LL+ ++ R +L + FH+ Sbjct: 239 FPIDSILEKKPRRVKMYWLVGGELMSEWRRLDKLLSGEIDSEVRREAARMLAEAKMAFHE 298 Query: 275 RLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY 334 +L + + F L++I V++++ + I+L + + + I Q Sbjct: 299 KLAAGVSVLSFALMAI---PLGISVQRKETSANLGIALGLGVLYYLMTALIGWGGGQGMP 355 Query: 335 YIPILYLFL-FCISSIFLLMIKK 356 + +LY F + I L +I + Sbjct: 356 FPHLLYWIPNFLLQGIGLWLIYR 378 >gi|238750167|ref|ZP_04611670.1| Inner membrane protein yjgP [Yersinia rohdei ATCC 43380] gi|238711711|gb|EEQ03926.1| Inner membrane protein yjgP [Yersinia rohdei ATCC 43380] Length = 364 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 59/365 (16%), Positives = 129/365 (35%), Gaps = 27/365 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFSQKLVRILGAAVDGEIPTNLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G + +LI L LA+ S ++ + Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGMGKKSLIIAALILAVATSALAAVNTIWLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLY-IKISKYNPNNTLQGIFIVDSRDT 181 P ++ A+ + + L F +D + I + +F+ R Sbjct: 122 PWSSKHQDEVLNDARANPSLAALAGGQFKSSNDGSSALFIGNVS-GKEFNRVFLAQLRPN 180 Query: 182 QT--HKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + A SG + Q + LN G + + + +D I F Y Sbjct: 181 GNQRPSVIVADSGHMTERPDGSQVVTLNKGTRYEGTALLRDFRITDFVDYQAIIGHKEVQ 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 A N+ L N + R+EFH RLT + VI L+ + Sbjct: 241 QNNTVAEQMNMKQLWRSNEPDA----------RAEFHWRLTLIVSVVIMALLVVP--LSV 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFLFCISSIFLLM 353 RQ + +S+ + ++ F + + N P+++++ + L + Sbjct: 289 INPRQGR-----VLSMLPAMLLYLIFFLLQSSLRSNASSGKLDPLVWMWTVNGVYLALAV 343 Query: 354 IKKKY 358 I + Sbjct: 344 ILNLW 348 >gi|330997503|ref|ZP_08321352.1| permease, YjgP/YjgQ family [Paraprevotella xylaniphila YIT 11841] gi|329570534|gb|EGG52258.1| permease, YjgP/YjgQ family [Paraprevotella xylaniphila YIT 11841] Length = 633 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 88/224 (39%), Gaps = 6/224 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K ++++ + F+ + +FI + + + ++ + +L++L Y T+ Sbjct: 4 IKKIDIFVFKAYSLLFVGTFFICLFIFLMQFMWRYVDELIGKGLTLDVLAHFFYYASLTL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +PM P + + ++ ELL + G + +++P++ ILL I F +NI Sbjct: 64 IPMSLPLAILLASLITFGNLGERFELLSMKAAGIPLVRILQPIIIFNILLCIGSFYFQNI 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSR 179 P+ + L + + E +F+ I + K N L G+ I + Sbjct: 124 TGPEAQKKFYTLIYSMKQKSPELEIPEGIFYSEIPGYNIFVEKKGKENGMLYGVMIYSTT 183 Query: 180 DT-QTHKIYYAQSGSIDLDRQ----AIILNDGEVHRKSPISKDI 218 D + +I A S + + + GE R ++ Sbjct: 184 DGYEDAQIVLADSAELKTTADEKHLMLTMYAGERFRNMQAQGNM 227 Score = 42.3 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 59/148 (39%), Gaps = 20/148 (13%) Query: 219 SIMKFKSYTLQTESANSSTIVLKA--------NDQNLSFLLNPNPNNPNYRPELLETYRS 270 + F + + + ++ A N+ L++ + + + T+ Sbjct: 317 QTLNFDTLYSKLTVSQQQGVLRNAMQKSTIATNEYEFRGLISKDID------QSTRTHWV 370 Query: 271 EFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIE 330 E+HK+ T L + F I A A++R+ P+ IS++I F ++ + K+ Sbjct: 371 EWHKKFTLSLACLFFFFIG---APLGAIIRKGGLGVPVVISVTI-FIFYYIINVSGEKMA 426 Query: 331 QNPYYIPIL--YLFLFCISSIFLLMIKK 356 ++ +IP +L + I + + K Sbjct: 427 KSGEWIPWFGEWLSSMVLCPIGIFLTYK 454 >gi|225164329|ref|ZP_03726596.1| permease YjgP/YjgQ family protein [Opitutaceae bacterium TAV2] gi|224801063|gb|EEG19392.1| permease YjgP/YjgQ family protein [Opitutaceae bacterium TAV2] Length = 379 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 58/380 (15%), Positives = 143/380 (37%), Gaps = 30/380 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTE-SLNILLKISGYLIPT 59 MK + +I + + + L F+ V L+ + + + + ++ + K+ L+P Sbjct: 1 MKILQRHIFLSVLTTCFAAVLLFTFVLIVGNALKDLLQFALAGQITMPDMAKLLLLLVPY 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 V+ P VL M+ N+E+ + G + +P+L LA+ S+ I Sbjct: 61 VVAFALPIGVLTGVLLVLGRMSGNSEITAMRAAGLGIAFVTRPILLLAVAGSVICLIVNY 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-S 178 P R K + + + F R + + + + + L+ +++ + Sbjct: 121 YYMPMTRKPYKNMVPNIVRSDPLKLITARTFLREFPNAVVYVDEKD-GTVLRDLWVWELD 179 Query: 179 RDTQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPI-----SKDISIMKFKSYTLQ 229 RD + + ++AQ G + + ++ + + +G + +K +++ F S + Sbjct: 180 RDKRVVRAHHAQEGELAYNEESHKLVLKVREGTTELRDRDDPEAFNKVVTVSTFGSAEFE 239 Query: 230 TESANSS---TIVLKANDQNLSFL--------LNPNPNNPNYRPELLETYRSEFHKRLTQ 278 +N T K + L L P+ + P + ++ + +K+ Sbjct: 240 FSLSNLFGRITTRQKLDWMTLEELKAQREQLTAAPDADTPEGQMRRMQVDVT-LNKKAAN 298 Query: 279 WLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP- 337 L + F LI + K + R++ + +++ S + +E P + P Sbjct: 299 ALAVLAFALIGVPLGIKVS----RRETSANLGMALLLILIYYMLSGVAGWLEAYPRWRPD 354 Query: 338 -ILYLFLFCISSIFLLMIKK 356 I+++ + ++ + Sbjct: 355 LIVWVPPLLFAGFGAWLLSR 374 >gi|187929751|ref|YP_001900238.1| permease YjgP/YjgQ family protein [Ralstonia pickettii 12J] gi|309781533|ref|ZP_07676269.1| membrane protein [Ralstonia sp. 5_7_47FAA] gi|187726641|gb|ACD27806.1| permease YjgP/YjgQ family protein [Ralstonia pickettii 12J] gi|308919946|gb|EFP65607.1| membrane protein [Ralstonia sp. 5_7_47FAA] Length = 372 Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats. Identities = 54/367 (14%), Positives = 127/367 (34%), Gaps = 26/367 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + L ++ +++ + + ++ + N +L + G L Sbjct: 2 IFEQALRRELSFTAGAVFLVLLTFMLTTLVIRILGMAANGEANPNDVLLLIGLATLGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT +++E+++ +G S I+PVL ++ + + + Sbjct: 62 ILLCATLFISVLLVLTRWYKDSEMVVWFTSGISLTDFIRPVLRFSLPFIVLVALLALFGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYNPN-NTLQGIFIVDSRD 180 P + + S + F Y+ I + + +F+ ++ Sbjct: 122 PWANQQSALFRDRFEQRDVLSMISAGRFIEPAHGNYVLFIEGVDSGMKHARNLFVANAEQ 181 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANSS 236 + A++G + ++L+ G + +P D I++F Y ++ + + Sbjct: 182 DKIGVAV-AKTGEFKTMPNGDRFVVLDKGRRYEGTPGKLDYRIVEFDKYGVKVANKPPQA 240 Query: 237 TIVLKANDQNLSFLL-NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 L ++ LL +P P N E R+ L + F LI+I A Sbjct: 241 DANLPTKSRSTKDLLADPTPENLG-----------ELVWRIGLPLLALNFVLIAIPLA-- 287 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI---FLL 352 R + IF L + + + + + +++ LL Sbjct: 288 YVNPRLGRYTPMIFAVL--IYLTYSNLLNLSQAWVSQGKMNVFMAWWPIHLAAFICAVLL 345 Query: 353 MIKKKYT 359 + Y+ Sbjct: 346 FRFRHYS 352 >gi|254498611|ref|ZP_05111330.1| permease [Legionella drancourtii LLAP12] gi|254352151|gb|EET10967.1| permease [Legionella drancourtii LLAP12] Length = 359 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 54/368 (14%), Positives = 124/368 (33%), Gaps = 20/368 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + + + +V I Q++Q +N +S T I++K+ +PT+L Sbjct: 2 IIFRYLAREVFVTLIALTSILVLIFLSNQLIQYLNRAASGTIPGVIIMKLMMLELPTLLS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + + +E+ ++ G L++ +AI +++ + Sbjct: 62 LLVPLGFYIAMLVAYGRLYAESEMTVLRACGYGPNQLLQHSFIMAIGVALIVAAVMIWAS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNNT-LQGIFIVDSRD 180 P +L + + F + + + +++ + +F+ Sbjct: 122 PYIYIERAKLLRTTGIQTLVQTIMPGRFHAAHNGQEVFYVQSMSRDHSKAEHVFLAKRSK 181 Query: 181 TQT---HKIYYAQSGSIDLD----RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 + + +A + D IIL DG+ ++ +P D I +F Y + Sbjct: 182 EKNKMRWDVLWADKAFAETDAKTGEDYIILQDGKEYQGTPGHADYQISEFGEYKARLPHP 241 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 I + + L N +P +E RL+ + + L+++ Sbjct: 242 IVK-INDDLRTFSTASLWPLNNADPGKA--------AELQWRLSVPIMVLTLTLVAVP-- 290 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 R R K + F + L+ F + ++ L + Sbjct: 291 LSRINSRSGKYAKLFPAIIIYILYANLMFIGRDAIVSGKIPQWLGLWWIHFLVVALGLFL 350 Query: 354 IKKKYTKI 361 I + K+ Sbjct: 351 IWRNQVKL 358 >gi|313668050|ref|YP_004048334.1| hypothetical protein NLA_7120 [Neisseria lactamica ST-640] gi|313005512|emb|CBN86948.1| conserved hypothetical integral membrane protein [Neisseria lactamica 020-06] Length = 356 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 52/363 (14%), Positives = 123/363 (33%), Gaps = 10/363 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +IL + + + +L + +P Sbjct: 1 MNLISRYIIRQMTAMTVYTLLAFLALYSFFEILYETGNLGKGSYGIWEMLGYTALKMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L + ++EL +I G S L+ + ++ ++ Sbjct: 61 AYELMPLATLIGGLLSLGRLAADSELTVIKAGGVSTRKLLSVLSQFGLIFALATAALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + + A A + L+ + + + I I + P++TL GI I + D Sbjct: 121 IAPALNQKAENIKAAAINGKISTGNT-GLWLK-EQNSIINIREMLPDHTLLGIKIWERND 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ D + L + + S ++ + + +++ Sbjct: 179 KNELVQATEAESAVLNDDGSWQLKNIRRSTLGEDKVETSTAAEENLPISVKRNLMEVLLV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K + ++ L + N R + + Y +L + + L+++ R Sbjct: 239 KPDQMSVGELTAYISHLENNR-QNTQIYAIALWHKLVYPVAAWVMALVALAF--TPQTTR 295 Query: 301 QRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 +F + + + F + P+ IL LF + I +I+K+ Sbjct: 296 HGNMGLKLFGGICLGLLFHFAGRLFGFTARLYGVPPFLAGILPTALFALIGI--WLIRKQ 353 Query: 358 YTK 360 + Sbjct: 354 EKR 356 >gi|206900512|ref|YP_002251020.1| permease YjgP/YjgQ, putative [Dictyoglomus thermophilum H-6-12] gi|206739615|gb|ACI18673.1| permease YjgP/YjgQ, putative [Dictyoglomus thermophilum H-6-12] Length = 356 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 61/363 (16%), Positives = 126/363 (34%), Gaps = 12/363 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y L+ F + L I V + ++LV + + L + ++ IP Sbjct: 1 MKIISKYFLQNFIPVFFVGLLLFTTILLVSPLFIIMDLVVARSIPLKVAFELFLTKIPPY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + V+ + + E++ + +G S + +L + + + +F Sbjct: 61 LTYTFPMAIFLAVVYVIGQFSEHGEIMAMKASGASIKYFLPAILVFSFSVQLIMFYVNEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT--LQGIFIVDS 178 + PK K L +K+ + E F +++ + K +P N + + I Sbjct: 121 VAPKAYEREKFLLSKSYNNIAVQSRE--NVFFNENNNFYFFRKVDPKNKRFEEILLIELL 178 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT--LQTESANSS 236 I YA+ + D + DGEV+ + I +FK Y L Sbjct: 179 ERGNIKLIIYAKKATWDEIK-GWTFMDGEVYSLNKEGDMIFQGRFKEYKVVLDRNPYQLV 237 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + ++ +++ L ++EFH R+ IF ++++ Sbjct: 238 PSSKPIEEMSIFEIIDQ-IRLLEGTGLNLNNLKTEFHIRIALPFTCPIFAILAL---GLG 293 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP-YYIPILYLFLFCISSIFLLMIK 355 + + + +S+ F + FS + Y +L I + ++ Sbjct: 294 LNMGRGGRSLSFGLSVISIFVYYVLFSIGRSLAKAGIVSYFLGAWLGNIIFLIIGIYLLN 353 Query: 356 KKY 358 KK Sbjct: 354 KKR 356 >gi|123440874|ref|YP_001004865.1| hypothetical protein YE0501 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|332160137|ref|YP_004296714.1| hypothetical protein YE105_C0513 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|122087835|emb|CAL10621.1| putative membrane protein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|318607297|emb|CBY28795.1| putative permease [Yersinia enterocolitica subsp. palearctica Y11] gi|325664367|gb|ADZ41011.1| hypothetical protein YE105_C0513 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330859699|emb|CBX70035.1| lipopolysaccharide export system permease protein lptF [Yersinia enterocolitica W22703] Length = 364 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 56/365 (15%), Positives = 129/365 (35%), Gaps = 27/365 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFSQKLVRILGAAVDGEIPTNLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G + +LI L LA++ S ++ + Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGMGKKSLIMAALILALVTSALAAVNTIWLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLY-IKISKYNPNNTLQGIFIVDSRDT 181 P ++ A+ + + L F D + I +F+ R Sbjct: 122 PWSSKHQDEVLNDARANPSLAALAGGQFKSSTDGNSALFIGNVT-GKEFNRVFLAQLRPN 180 Query: 182 QT--HKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + A SG + Q +ILN G + + + +D I F Y Sbjct: 181 GNQRPSVVVADSGYMTERPDGSQVVILNKGTRYEGTALLRDFRITDFVDYQAIIGHQEVQ 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 A+ + L + + R+EFH RLT + ++ L+ + Sbjct: 241 QNNNAADQMTMKQLWRSHQPDA----------RAEFHWRLTLIVSVIVMALLVVP--LSV 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFLFCISSIFLLM 353 RQ + +S+ + ++ F + + N P ++++ + + L + Sbjct: 289 VNPRQGR-----VLSMLPAMLLYLIFFLLQSSLRSNASSGKLDPSIWMWAVNGAYLALAV 343 Query: 354 IKKKY 358 I + Sbjct: 344 ILNLW 348 >gi|187250532|ref|YP_001875014.1| permease YjgP/YjgQ family protein [Elusimicrobium minutum Pei191] gi|186970692|gb|ACC97677.1| Permease YjgP/YjgQ family protein [Elusimicrobium minutum Pei191] Length = 364 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 73/369 (19%), Positives = 138/369 (37%), Gaps = 18/369 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + Y+++ + FL + +VFI +++ ++ NL + + + K L+P V Sbjct: 3 INIISKYMIKNLLTFFLGALFVLVFIFFMMHFIKLFNLAMTFGADMLWVFKTLVKLVPDV 62 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P F + L +M+ N E++ + G S + KP+ A+ L + +F N Sbjct: 63 FSLCAPMAFQLAVLLTLGNMSENGEIIALRAAGFSFKEITKPLFIFALFLFLVIFSFTNW 122 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGI-FIVDS 178 I PK + + + LE F + D + + +P N + + + + Sbjct: 123 ITPKNTKSFLDARNNVRGRIGKVILEPKTFMEIGD-WSLYMESLDPKTNLMSQVRLLNKN 181 Query: 179 RDTQTHKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKD-ISIMKFKSYTLQTESANS 235 A SG ++ D + L DG++ R S I FKSY + + Sbjct: 182 DSANYTTKINALSGIVNVTSDYVGLKLFDGQMQRVSSEDPSKIMAANFKSYHVTFPLVRA 241 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSE------FHKRLTQWLFPVIFGLIS 289 L+ + L+ Y EL + R+E + L ++ Sbjct: 242 KERRLREEEFTTPQLIAR-----IYSGELTDKERAEHKTNVAMRQVLALSPLVLVLLSCP 296 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 +V + + + + I I LS + G S + K E Y+ P L + I S Sbjct: 297 LVFSFGKRANKAWGMLWSIVIVLSFYMLLMAGVS-LGKKYEIAAYFAPFLPIAAGLIVSR 355 Query: 350 FLLMIKKKY 358 +L + K Sbjct: 356 YLWKTRLKR 364 >gi|293369978|ref|ZP_06616545.1| putative membrane protein [Bacteroides ovatus SD CMC 3f] gi|292634896|gb|EFF53418.1| putative membrane protein [Bacteroides ovatus SD CMC 3f] Length = 638 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 92/208 (44%), Gaps = 4/208 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K +++I++ F+ + +FI + + + ++ + ++++ + Y T+ Sbjct: 10 IKKLDIFIVKSFLMLFIGTFFICLFIFMMQFLWRYVDELVGKGLEMSVMAQFFFYSALTL 69 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+ P + + + ELL + G S + +++P+ F L F +N+ Sbjct: 70 VPVSLPLAVLLASLITFGNFGERYELLAMKAAGISLLKIMRPLAFFVCGLIGVSFYFQNV 129 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 + P ++ + L + + E +F+ D +K++K N L + I + Sbjct: 130 VGPIAQAKLGTLILSMKQKSPELDIPEGVFYSEIKDYNLKVAKKNRKTGMLYDVLIYSMK 189 Query: 180 DT-QTHKIYYAQSGSID--LDRQAIILN 204 D + +I YA SG ++ D+Q + L+ Sbjct: 190 DGFEKARIIYADSGRLEMTADKQHLWLH 217 >gi|22297556|ref|NP_680803.1| hypothetical protein tlr0012 [Thermosynechococcus elongatus BP-1] gi|22293733|dbj|BAC07565.1| tlr0012 [Thermosynechococcus elongatus BP-1] Length = 379 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 60/368 (16%), Positives = 125/368 (33%), Gaps = 27/368 (7%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + YILR + R F+ IA + + I + L +++ +PT Sbjct: 18 SLLDRYILREMIRPFVFGFGIFTAIAAVIGTVFYLIRNMVEHHLGLLSAIQVFFLRLPTF 77 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + ++R +EL+ + G S + L++P L + F + Sbjct: 78 AVLGIPMAMLFGALLSYSQLSRRSELIACKSCGVSPVRLVRPALLAGFCALLCTFALNEL 137 Query: 121 IEP-KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD---LYIKISKYNPNNTLQGIFIV 176 + P IK L N+F+R D + + + + ++ Sbjct: 138 VAPPLAYRAIKTLEVAIHRPQPTFQTR-NIFYRRFGDGHLRQLFFAHRFDGKVMGQVTVL 196 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVH-----RKSPISKDISIMKF----KSYT 227 + + +I AQ A + G H R +++ S +F Sbjct: 197 NFEQGELREIITAQEAQWQ--GSAWLFRQGTYHHLRGDRDYDVAEIFSERRFAYPRTPLD 254 Query: 228 LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGL 287 L E+ + + + L L + + L +R + ++L+ + F + Sbjct: 255 LAMETRVPEFMTSREIYRYLQILA------ESGDAKRLRQWRVQLQEKLSLPFLCLSFAV 308 Query: 288 ISIVAADKRALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFLFCI 346 I A ++ + +S++I FG + F + + I +L + Sbjct: 309 IG---AVLGISSPRQGQGRAFGLSVAIIFGYYVAAFIFTAFGEGGAVHPIVASWLPKGIV 365 Query: 347 SSIFLLMI 354 S+I L M+ Sbjct: 366 SAIALGML 373 >gi|33240287|ref|NP_875229.1| putative permease [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33237814|gb|AAP99881.1| Unclassified ABC-type transport system permease [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 403 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 55/370 (14%), Positives = 127/370 (34%), Gaps = 23/370 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + ++ R + F + ++ V + + + S +L L++ +P+ L Sbjct: 32 LLDRWLFRELLPPFFFAISAFTVVSLSVGVMFDLVRKIVESGLALKFALQVFFLKLPSFL 91 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P M T + ++ N+E+ + + G S +I + L +L++ FI ++I Sbjct: 92 VISFPMAILMATLLTFSRLSSNSEVKALKSIGISTKRMIVAAITLGLLMTGITFIFNDLI 151 Query: 122 EPKCRSTIKQLSAK-----AQLALTFSYL--EENLFFRLDDDLY-------IKISKYNPN 167 P + + + + ++ ++ N Sbjct: 152 VPSANKSAEATLRRGLGVSMHSDYVTDIMYSRFGKIVDPSSNISRDGMTHLFYAKEF-QN 210 Query: 168 NTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 T+ + ++D ++ A+ G + +DG + +P SI F++Y Sbjct: 211 KTMIDVTLLDFSRLGYKQMLVAKKGYWNNLEANWEFHDGNILTIAPNGGSTSI-SFENYV 269 Query: 228 LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYR--PELLETYRSE--FHKRLTQWLFPV 283 +S + D N L + Y+ L E R E ++ T + V Sbjct: 270 YPLDSGPKKIAKI-PKDANYMTLSDAYKAKDLYKLSGNLKEVRRMEVRIQEKFTLPMACV 328 Query: 284 IFGLISIVAADKRAL-VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 +F LI A Q + + + + + + FS + +P+ + Sbjct: 329 VFSLIGSSLACSPNTRSTQGQGFALSIVLILAYYILSFVFSSLGVSGALSPFVGAWSPVI 388 Query: 343 LFCISSIFLL 352 + ++LL Sbjct: 389 ISLSGGLYLL 398 >gi|222099907|ref|YP_002534475.1| Permease YjgP/YjgQ family protein [Thermotoga neapolitana DSM 4359] gi|221572297|gb|ACM23109.1| Permease YjgP/YjgQ family protein [Thermotoga neapolitana DSM 4359] Length = 1048 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 62/343 (18%), Positives = 125/343 (36%), Gaps = 6/343 (1%) Query: 14 RSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMET 73 FL+ + + + Q +L+ + L + Y +P + M P + Sbjct: 1 MPFLIGLGGFIIFVSIEILYQLSDLIVRHRVGIGKLFLLLYYYLPYFVAMGVPVGVLLSI 60 Query: 74 TNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLS 133 + ++ + EL+ I G S+ LI P LFL++LLS+ +F + + P +S ++ Sbjct: 61 FWTFSKLSEDRELMAIQVHGISQKNLIVPFLFLSVLLSVIVFFLNDQVVPVYQSRAEEAM 120 Query: 134 AKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSRDTQTHKIYYAQSG 192 +K L ++ EN+ ++ +D Y + KY+ NTL + I KI A+ Sbjct: 121 SKYVLKKPEVFVVENVISKIGEDQYFYVEKYDEKTNTLWNVVIFKY--GSEEKIVTAKR- 177 Query: 193 SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS-TIVLKANDQNLSFLL 251 + + L DG + + F L + V K + L Sbjct: 178 -VQKREERWYLFDGRYYTVDKDGFLKLDVHFSEMELDITEDIENLLRVGKTPREMTGKEL 236 Query: 252 NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFIS 311 + E R L P++ L+ + + L + + F+ Sbjct: 237 KEKIEFFRKVGIKPSPWIVELQSRYANSLTPIVIVLVGVPLSLLFQLRSKSWGVIFTFVL 296 Query: 312 LSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + + G S + + +P + P + +F + L ++ Sbjct: 297 VVLYQGSGAWLSAMGKENLLDPGFAPWIPNIVFSVMGGLLFVL 339 >gi|307566095|ref|ZP_07628553.1| putative membrane protein [Prevotella amnii CRIS 21A-A] gi|307345283|gb|EFN90662.1| putative membrane protein [Prevotella amnii CRIS 21A-A] Length = 633 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 91/213 (42%), Gaps = 6/213 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +++I + G F+ + +F+ + + + ++ + ++++L + GY+ ++ Sbjct: 5 KKLDIFIAKQFGLLFVGTFFISLFVLMMQFLWRFVDDLIGKGLTIDVLAQFFGYMALMMV 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P P + + ++ ++EL I G S + ++ + IL+++ F +N I Sbjct: 65 PQALPLAVLLSSLMTYGNLGESSELTAIKAAGISLFQSFRGLIGITILITLLSFYFQNNI 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSRD 180 P + + QL + + E +F+ + + K N L I + D Sbjct: 125 APVAQKHLYQLIISMKQKSPELEIPEGVFYSGIPQTNLYVEKKNLKTGHLYNIMVYRMTD 184 Query: 181 T-QTHKIYYAQSGSIDLD--RQAIILN--DGEV 208 + + I A SG + ++ ++LN +GE Sbjct: 185 SYEDQAIILADSGMLQSTAEKKHLVLNLWNGEW 217 >gi|94311740|ref|YP_584950.1| permease YjgP/YjgQ [Cupriavidus metallidurans CH34] gi|93355592|gb|ABF09681.1| predicted permease [Cupriavidus metallidurans CH34] Length = 372 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 47/362 (12%), Positives = 127/362 (35%), Gaps = 21/362 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ + R + + L ++ +++ + + ++ S N +L + G L Sbjct: 2 IFQQALRRELAYTAGAVFLVMLTFMLTSLVIRILGMAANGKASPNDVLMLIGLATIGYLS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT +++E+++ ++G S LIKPVL A + + Sbjct: 62 ILLSATLFISTLIVLTRWYKDSEMVVWFSSGVSLRDLIKPVLQFAAPFFVMALLLGLFAW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYNPN-NTLQGIFIVDSRD 180 P + + S + F + Y+ I + + + +F+ ++ Sbjct: 122 PWANQQSALFRDRFEQRGVLSMIASGRFIEPANGNYVLFIEGIDADMKHARNVFVANAES 181 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANSS 236 + + A G + + +++ G + P + I++F Y ++ ++ + Sbjct: 182 GKIG-VALAHQGQFETMPNGDRLVVMEHGRRYAGIPGQLNYRIVEFDKYAVKVDNKPQDA 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 L ++ L+ + E R++ + F +I+I A Sbjct: 241 AADLPTKSRDTIDLI----------RDPTRENLGELLWRISLPILAFNFVMIAIPLA--Y 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R + +F L + + + ++ + ++ ++ ++ Sbjct: 289 VNPRLGRYTPLVFAVL--IYLTYSNLINLAQAWVRSGAMSFWMAIWPIHLAVFLCALVMF 346 Query: 357 KY 358 +Y Sbjct: 347 RY 348 >gi|238760356|ref|ZP_04621497.1| Inner membrane protein yjgP [Yersinia aldovae ATCC 35236] gi|238701416|gb|EEP93992.1| Inner membrane protein yjgP [Yersinia aldovae ATCC 35236] Length = 364 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 55/365 (15%), Positives = 127/365 (34%), Gaps = 27/365 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFSQKLVRILGAAVDGEIPTNLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G + +LI L LAI+ S ++ + Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGMGKKSLIMAALVLAIVTSALAAVNTIWLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNTLQGIFIVDSRDT 181 P + A+ + + L F D + I N +F+ R Sbjct: 122 PWSSKHQDDVLNDARANPSLAALAGGQFKSSTDGNAALFIGNVN-GKEFNRVFLAQLRPN 180 Query: 182 QT--HKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + A G + Q ++LN G + + + +D I F Y Sbjct: 181 GNQRPSVVVADRGHMTERPNGSQVVVLNKGTRYEGTALLRDFRITDFVDYQAIIGHQEVQ 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + + R+EFH RLT + +I L+ + Sbjct: 241 QNNNVVEQMTMKQLWSSDEPEA----------RAEFHWRLTLIVSVIIMALLVVP--LSA 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFLFCISSIFLLM 353 RQ + +S+ + ++ F + + N P+++++ + + + + Sbjct: 289 VNPRQGR-----VLSMLPAMLLYLIFFLLQSSLRSNAGNGKLDPLIWMWAVNGTYLAIAV 343 Query: 354 IKKKY 358 I + Sbjct: 344 ILNLW 348 >gi|237729198|ref|ZP_04559679.1| YjgP [Citrobacter sp. 30_2] gi|226908927|gb|EEH94845.1| YjgP [Citrobacter sp. 30_2] Length = 366 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 49/356 (13%), Positives = 123/356 (34%), Gaps = 17/356 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ SI ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMVLALFTSIIAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + + + + + + +F+ R Sbjct: 122 PWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSNFKDVFLAQIRPKG 181 Query: 183 T--HKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F+ Y + Sbjct: 182 NARPSVVVADSGHLTQMRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + N+ L + + R+E R+T + L+ + Sbjct: 242 DPNDTDQMNMRTLWTTD----------TDRARAELTWRITLVFTVFMMALMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 RQ + + + L S + + + ++ ++ +++ Sbjct: 290 NPRQGRVLSMLPAMLLYLLFFLVQTSLKSNGGKGKLDPVFWMWTVNLAYLALAIVL 345 >gi|237744434|ref|ZP_04574915.1| conserved hypothetical protein [Fusobacterium sp. 7_1] gi|229431663|gb|EEO41875.1| conserved hypothetical protein [Fusobacterium sp. 7_1] Length = 359 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 56/332 (16%), Positives = 120/332 (36%), Gaps = 12/332 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YIL + +++ FI + ++ + + S+ +L++ + IP + Sbjct: 1 MKIINKYILDELKGPIILAVFVFTFIFLLDIVVAMMEHIIVKGISVFDVLRLLSFYIPPI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + T +RN+E + + + G S ++KP+L +AI +IF+ + Sbjct: 61 LTQTIPIGMFLGIMICFTKFSRNSESVAMVSAGMSIRDILKPILAIAIGAAIFIIFLQES 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI--FIVDS 178 I P+ +K + K L+E F D I + K + + + I F Sbjct: 121 IIPRSFIKLKYVGTKIAYENPVFQLKEKTFVDNLDGYSIYVDKVDSDGKAKNIIGFEKSK 180 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 ++ + + AII+ + + K I F + + N + Sbjct: 181 DKSKFPLVLTGEEAFWK--DSAIIVKESQFVSFDETGKKNLIGTFDENRIVLK-PNFQEL 237 Query: 239 VLKAND---QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI-VAAD 294 +K D +++ L+ + Y+ E ++L V +I ++ Sbjct: 238 SIKIKDVEALSITELIRGLKK---VEATEVIKYKIEIFRKLALVFSTVPLAVIGFCLSLG 294 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYII 326 + ++ I + I + + G Sbjct: 295 HHRISKKYSFILAMIIVFAYIIFLNVGIVMAT 326 >gi|78186277|ref|YP_374320.1| hypothetical protein Plut_0389 [Chlorobium luteolum DSM 273] gi|78166179|gb|ABB23277.1| conserved hypothetical protein [Chlorobium luteolum DSM 273] Length = 360 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 59/348 (16%), Positives = 125/348 (35%), Gaps = 11/348 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI R ++F+ + L V + +I +++ ++ + + + + IP Sbjct: 1 MKILDRYIFRQFVKTFIFTSLAFVALFMLIHMVENLDDFMDKNQGFEAIAQYYLFAIPQT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + +P + V + ++EL I + G S L+ P L +++S + Sbjct: 61 ILITSPVSSLLAAILVAGKLAVSSELPAIRSAGVSMGQLLYPFLLGGMIISTINLTNSFW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRL----DDDLYIKISKYNPN-NTLQGIFI 175 I P T++ + + EE L + I + NP+ ++ + + I Sbjct: 121 IAPAA--TLRNNNFELTELGHQRRDEEGGNSNLHILEPGNRIITLGSLNPDMSSAREVSI 178 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 A + +++A +L + S+ L + Sbjct: 179 EQFSQKGIVSRSDADGMRYNPEKKAWVLENAAERMFEDGSERFWTEPMLPVQLHLSLQSL 238 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + + L+ ++ N++ + LE + H +L+ +I I I+ Sbjct: 239 AELNLRPDEMNIARHWQYLSEKKHAGFAGLERSSVKLHTKLSLPFASLI---IIIIGVPL 295 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 A ++ I ISL F +F G I N P+L +L Sbjct: 296 SAKKKRGGLAAEIGISLFAGF-LFLGLQKTIATFGYNGVMPPMLAAWL 342 >gi|189501480|ref|YP_001957197.1| permease YjgP/YjgQ family protein [Candidatus Amoebophilus asiaticus 5a2] gi|189496921|gb|ACE05468.1| permease YjgP/YjgQ family protein [Candidatus Amoebophilus asiaticus 5a2] Length = 527 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 50/224 (22%), Positives = 94/224 (41%), Gaps = 7/224 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K + +L + F++ VFI + L + + + +++ Y Sbjct: 4 IKRTDKIVLTPFIKLFILVLSVTVFIMLMQFFLIYFDELIGKDLGFWVYVQLFCYFGINA 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 PM P + + V S+ EL + + G I +++P+LFL LLSIF++ S Sbjct: 64 TPMAFPLATLVSSLMVFGSLGEQLELTALKSAGIPFIRILRPLLFLVTLLSIFVYFSNGY 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVD-S 178 I PK L + ++E +F+ D I++ + P+ TL+ I I D + Sbjct: 124 IVPKVTVKAHTLLYDLRKKKPSIAIKEGVFYNGIPDYSIRVERKLPDQKTLEDIVIYDHT 183 Query: 179 RDTQTHKIYYAQSGSIDL--DRQAII--LNDGEVH-RKSPISKD 217 ++ + A G + + Q ++ L +G + K P KD Sbjct: 184 KNKGNVHMTTASFGQLTTINNGQYLVIELFNGHNYLEKLPEKKD 227 >gi|239815707|ref|YP_002944617.1| permease YjgP/YjgQ family protein [Variovorax paradoxus S110] gi|239802284|gb|ACS19351.1| permease YjgP/YjgQ family protein [Variovorax paradoxus S110] Length = 379 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 58/358 (16%), Positives = 139/358 (38%), Gaps = 18/358 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F + + + RSF + + +V I + +++ + L S + + + + + Y + +P Sbjct: 2 LFHSSLRKELSRSFGATLVVLVTIVMTMMLIRTLGLASKGSVNPSEVFLVMAYTVLGYMP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + + L+ M R++E++I ++G ++P+ A + + + + + Sbjct: 62 TILSLSLFIAIVGTLSRMYRDSEMVIWFSSGRGLADFVEPLFRFAWPVLVLIAVMALLGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNN-TLQGIFIVDSRD 180 P S + A+ + + F + I K P+ T +FI + + Sbjct: 122 PWANSQTIGMRAQYEGRSDIERVTPGEFRESSGRMRVFFIDKDTPDGATATNVFIW-AVE 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEV-HRKSPISKDISIMKFKSYTLQTESANS-S 236 A+SG I + + ++L++G+ R + + I +F++Y + + S Sbjct: 181 RGLQITTSARSGRIENVGNNRFLMLSNGQRLERPLLPTAGLKISEFETYGTRAGGTSDFS 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI-VAADK 295 A + LL E + E R+ L + F L+++ V++ Sbjct: 241 ADNTPARAKPTLQLL----------REPGDASHGELAWRIGMLLAAINFVLLALTVSSVN 290 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + R + +F + + G S+I ++ +L+ + I +LL+ Sbjct: 291 PRVGRSGNLLFALFAFVVYYNMLNLGQSWISSGRFSMGSFMLLLHGGVLLIGVAWLLL 348 >gi|124025509|ref|YP_001014625.1| putative permease [Prochlorococcus marinus str. NATL1A] gi|123960577|gb|ABM75360.1| possible permease [Prochlorococcus marinus str. NATL1A] Length = 395 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 66/372 (17%), Positives = 137/372 (36%), Gaps = 27/372 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + +IL + S ++ V I I + ++ ++I +P+ + Sbjct: 24 LLDRWILFELLPPLFFSIAAFTVVSLSVGVIFDLIRKIVEIGLPFSVAIQILLLKLPSFI 83 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + T S+N N+E+ + + G S +I P L L+I +S FI N I Sbjct: 84 VISFPMAMLLSTLLAYGSLNDNSEIKALKSIGISVYRIILPGLILSIAMSYMTFIFNNNI 143 Query: 122 EPKCRSTIKQLSAKAQLALTFS-------YLEENLFFRL-----DDDLY--IKISKYNPN 167 P + + A + + + ++ + + K+ + Sbjct: 144 VPNTNKNAEIILANSLGRSFANEQGEDIIFSKKGEILDPYSSYKKNGVTHLFYAWKFI-D 202 Query: 168 NTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKS-- 225 + + ++D ++ A+ G + D+ +G++ SP + KF S Sbjct: 203 GQMLDVTVIDFSKLGFTQMLKAKKGIWNSDKNNWEFFEGDILTLSPDGSNTRT-KFLSFL 261 Query: 226 YTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRP----ELLETYRSEFHKRLTQWLF 281 Y L TE N + + +ND NL N Y+ + + ++ T + Sbjct: 262 YPLGTELTNIAQLPKDSNDMNLGE---ANTAMKLYQSSGNIKEARRMKVRIQEKFTLPIA 318 Query: 282 PVIFGLISIV-AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY 340 +F LI +++ + + I + I + + + FS + K NP++ Sbjct: 319 CSVFALIGCSFGVMQKSGGGRSQSFGLSIILILIYYILSFSFSSLGVKGIINPFFAAWSP 378 Query: 341 LFLFCISSIFLL 352 +FL + FLL Sbjct: 379 VFLSMLGGGFLL 390 >gi|320335817|ref|YP_004172528.1| permease YjgP/YjgQ family protein [Deinococcus maricopensis DSM 21211] gi|319757106|gb|ADV68863.1| permease YjgP/YjgQ family protein [Deinococcus maricopensis DSM 21211] Length = 366 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 52/368 (14%), Positives = 141/368 (38%), Gaps = 17/368 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 ++ ++ Y++ I + + ++ V +L+ I + + S ++ ++ +P Sbjct: 6 LRRYDRYVMAEILPLLVAGLVVVMLAVLVGALLEVIAPLLAKGASPALVARLVALQLPEA 65 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P F T L+ ++ + E+ G + L PVL + + +++ F+ Sbjct: 66 IKIGLPVGFLFATLLGLSRLSSDAEIKAALAGGVAPGRLFLPVLLMGVGVTVAAFVIGET 125 Query: 121 IEPKCRSTIKQLSAKAQLALT--FSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 + P+ ++ + + L + L R + I +++ P L+G+ +V Sbjct: 126 LGPRAKTESLSVQRQIVLDNPRVLGLDQPGLILRDALNRAISVTRVRPGGVLEGVRVVAL 185 Query: 179 RDTQTH-KIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL---QTESAN 234 R++ I A+ G + D + L DG+ +++++F+ L +++ Sbjct: 186 RESGGPSSIITAREGHLR-DSNVLELLDGQRITYQDGRP-VTVIRFRRGELPVQDLQASF 243 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 ++ K D L L + + ++ + L + G ++ A Sbjct: 244 KTSDAPKPIDTPLPQLWAKVQTYAQQHVNAPQETTA-LQRKFAEPLAALAMGFFAVALAL 302 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF----LFCISSIF 350 + + L ++F + +S + ++ P++ + L+ ++ + Sbjct: 303 ---FTFRSGLNVGLVWVLLLTFAYYASWSVF-RVMGESGALPPVVAAWTPDVLYLVAGLV 358 Query: 351 LLMIKKKY 358 LL I + Sbjct: 359 LLAIAARR 366 >gi|298483137|ref|ZP_07001317.1| permease [Bacteroides sp. D22] gi|298270654|gb|EFI12235.1| permease [Bacteroides sp. D22] Length = 632 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 92/208 (44%), Gaps = 4/208 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K +++I++ F+ + +FI + + + ++ + ++++ + Y T+ Sbjct: 4 IKKLDIFIVKSFLMLFIGTFFICLFIFMMQFLWRYVDELVGKGLEMSVMAQFFFYSALTL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+ P + + + ELL + G S + +++P+ F L F +N+ Sbjct: 64 VPVSLPLAVLLASLITFGNFGERYELLAMKAAGISLLKIMRPLAFFVCGLIGVSFYFQNV 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 + P ++ + L + + E +F+ D +K++K N L + I + Sbjct: 124 VGPIAQAKLGTLILSMKQKSPELDIPEGVFYSEIKDYNLKVAKKNRKTGMLYDVLIYSMK 183 Query: 180 DT-QTHKIYYAQSGSID--LDRQAIILN 204 D + +I YA SG ++ D+Q + L+ Sbjct: 184 DGFEKARIIYADSGRLEMTADKQHLWLH 211 >gi|256027205|ref|ZP_05441039.1| hypothetical protein PrD11_04296 [Fusobacterium sp. D11] gi|260494013|ref|ZP_05814144.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33] gi|289765182|ref|ZP_06524560.1| conserved hypothetical protein [Fusobacterium sp. D11] gi|260198159|gb|EEW95675.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33] gi|289716737|gb|EFD80749.1| conserved hypothetical protein [Fusobacterium sp. D11] Length = 359 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 56/332 (16%), Positives = 120/332 (36%), Gaps = 12/332 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YIL + +++ FI + ++ + + S+ +L++ + IP + Sbjct: 1 MKIINKYILDELKGPIILAVFVFTFIFLLDIVVAMMEHIIVKGISVFDVLRLLSFYIPPI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + T +RN+E + + + G S ++KP+L +AI +IF+ + Sbjct: 61 LTQTIPIGMFLGIMICFTKFSRNSESVAMVSAGMSIRDILKPILAIAIGAAIFIVFLQES 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI--FIVDS 178 I P+ +K + K L+E F D I + K + + + I F Sbjct: 121 IIPRSFIKLKYVGTKIAYENPVFQLKEKTFIDNLDGYSIYVDKVDSDGKAKNIIGFEKSK 180 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 ++ + + AII+ + + K I F + + N + Sbjct: 181 DKSKFPLVLTGEEAFWK--DSAIIVKESQFVSFDETGKKNLIGTFDENRIVLK-PNFQEL 237 Query: 239 VLKAND---QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI-VAAD 294 +K D +++ L+ + Y+ E ++L V +I ++ Sbjct: 238 SIKIKDVEALSITELIRGLKKIEATE---VIKYKIEIFRKLALVFSTVPLAVIGFCLSLG 294 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYII 326 + ++ I + I + + G Sbjct: 295 HHRISKKYSFILAMIIVFAYIIFLNVGIVMAT 326 >gi|237747610|ref|ZP_04578090.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] gi|229378972|gb|EEO29063.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] Length = 357 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 50/344 (14%), Positives = 123/344 (35%), Gaps = 23/344 (6%) Query: 21 LFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSM 80 + + I + +++ + + + + +L + G+ LP++ + V+T Sbjct: 1 MTLFTITITMMLIRILGQAAKGRVASDDVLALLGFTSLNYLPIILILTGFVSVLLVVTRS 60 Query: 81 NRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLAL 140 +++E+++ +G S ++PV+ AI + + + + P + + + Sbjct: 61 YQDSEMVVWFASGLSLTRWLRPVIEFAIPIVVLVSLLGFFATPWAYRQSAEFRERFEKRE 120 Query: 141 TFSYLEENLFFRL-DDDLYIKISKYNPN-NTLQGIFIVDSRDTQTHKIYYAQSGSIDLDR 198 + + F + K + + N ++ +FI +R+ ++ G+++ + Sbjct: 121 DIARISPGKFQESAAAQRVFFVEKMSDDLNKVKNVFINSTRNGNI-TTVVSKEGTVETNE 179 Query: 199 QA---IILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANSSTIVLKANDQNLSFLLNPN 254 + I+L+DG + ++P IM F YT S A+ S + A L+ Sbjct: 180 KGEKFIVLDDGIRYEETPDQSGFRIMDFDKYTAYIASKADMSGTNVSARSMTTMELMT-- 237 Query: 255 PNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSI 314 ++ + E R+ + LI + R + + I L Sbjct: 238 --------DINSHKQGELLWRIGLPF--MAILLILLGIPLGFVNPRAGRSFNLIIAVLLY 287 Query: 315 S----FGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 F + KI + P+ + I +F + Sbjct: 288 MTYSNLLSFMQAYVVQKKIMFGLAWWPLHLIVALVIVLLFAWRL 331 >gi|251771423|gb|EES52002.1| permease YjgP/YjgQ family protein [Leptospirillum ferrodiazotrophum] Length = 377 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 50/327 (15%), Positives = 112/327 (34%), Gaps = 17/327 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+ + F +S L +V + Q L +NL+ + S+ + ++ + P Sbjct: 1 MKIIHRYLFLELLTPFFLSLLVLVILLLTQQALLIMNLLVNKGLSVETVFRLLSMIFPQF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P +T + + E++ +G S L+ P+ A + F Sbjct: 61 LSMIIPVSVLTASTATFHRLASDGEIIAFKASGISLSRLLLPLFLFAAIGFGTNFYLSLK 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +++ L + ++ F I + K + + G+FI Sbjct: 121 AMETQGLSLQDLLVRVFQKKLSLAIKPQSFNNFMGRFIIYVEKMPTLSHIDGVFIYQKEK 180 Query: 181 TQTHKI-YYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + +AQSG I +R + L+ G ++ ++F SY L ++ Sbjct: 181 KTGPRTVIFAQSGEILNERHPPGLRLKLSHGTFFQEGSAQ---QYIRFGSYDLTITGHHT 237 Query: 236 ST-IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 I +K+ D+ + + +P+ L + Y+ + +P + + Sbjct: 238 DDSIRVKSIDEIRAEIARSPSPDPSLFRALEDRYK--------NYTYPFSCFFFAFLGIP 289 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWG 321 + ++ + + Sbjct: 290 YGIYTMRSGRLAGFVFATVTVILFYMM 316 >gi|126640321|ref|YP_001083305.1| hypothetical protein A1S_0228 [Acinetobacter baumannii ATCC 17978] gi|332874943|ref|ZP_08442794.1| permease, YjgP/YjgQ family [Acinetobacter baumannii 6014059] gi|332736886|gb|EGJ67862.1| permease, YjgP/YjgQ family [Acinetobacter baumannii 6014059] Length = 341 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 50/327 (15%), Positives = 120/327 (36%), Gaps = 16/327 (4%) Query: 31 QILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIID 90 ++++ + + +IL I GY +P L ++ P F + V + + E+ +++ Sbjct: 5 RLIKYFGVAAQGRLDASILFSIIGYRLPEFLTLILPLGFFIGLMLVFGRLYVDHEMAVLN 64 Query: 91 NTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLF 150 +G SR L + ++ + ++ + + + P ++L+ + F + F Sbjct: 65 GSGVSRHQLARLLIPMTLVYMVCQSVLMLWMTPWGLREFEKLTTTQAVRTGFDLVRPREF 124 Query: 151 FRLDDDLYIKISKYNPNNT-LQGIFIVDS--RDTQTHKIYYAQSGS---IDLDRQAII-L 203 I + + L+ IF ++ + + A+ + + D ++ L Sbjct: 125 ISSGP-YTIYAGSLSEDRKNLKDIFFYQRAAKEGKPDVMILAKEATRVEVANDTANVVDL 183 Query: 204 NDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPE 263 G + P + +F+SY L+ E+ + + L N+P Sbjct: 184 VQGRRYEIFPGQPKYTQAEFQSYRLRLENDKDVKFESGDVEALSTSKLFSKANDPVV--- 240 Query: 264 LLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFS 323 RSE RL +I ++S+ ++ + ++ P + + Sbjct: 241 -----RSELGWRLFGPFTIIIALMLSVALSEVSPRQGRYYRLIPSIFIFASLIVLMIAIK 295 Query: 324 YIIHKIEQNPYYIPILYLFLFCISSIF 350 I K E + + P+ L +++F Sbjct: 296 TRISKGELDIWAYPVALLVYAIAAALF 322 >gi|297171529|gb|ADI22527.1| predicted permeases [uncultured Oceanospirillales bacterium HF0500_09M11] Length = 354 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 50/350 (14%), Positives = 129/350 (36%), Gaps = 26/350 (7%) Query: 17 LMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNV 76 ++ +V + + ++ + ++ + + L + + +P L M+ P + V Sbjct: 4 VLVTFILVMVLVSGRFIKYLAEAAAGQIAADALFLVMAFRLPEFLQMILPLSLYIAILLV 63 Query: 77 LTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKA 136 L M+ + E++++ G +++ ++ A++ + + + P+ + + ++ + Sbjct: 64 LGRMHMDNEMVVLRAGGQGDGRVVRSLIVPALVAMSVIALFALYVTPQGDAEVNRIFEEQ 123 Query: 137 QLALTFSYLEENLFFRLDDD---LYIKISKYN-PNNTLQGIFIVDSR----DTQTHKIYY 188 + L F DD N L+ +F+ D+ + + Sbjct: 124 KGRSVLELLTPGRFHVKGDDDNQRATYAESLNREEGVLESVFVADASFSSEEAGRLLTVW 183 Query: 189 AQSGSIDLDR--QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 A+SG++ + L DG ++ P D + F+ ++ S SS+ + ++ Sbjct: 184 ARSGNLVQQDGISYLELTDGYQYQGKPGEADYREVAFEKARVRIGSERSSSRPPEVRGRS 243 Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 L++ + +E R + L I L ++ R RQ + + Sbjct: 244 TLDLID----------DGGNQAMAELAWRWSLVLTVPIMCLAAVP--LSRVNPRQGRFLR 291 Query: 307 PIFISLSISFGVFWGFSY----IIHKIEQNPYYIPILYLFLFCISSIFLL 352 I L V + + P+Y ++++ L ++F+L Sbjct: 292 MIPAVLGYMLYVGLLLTMRSWIAEVPGSERPWYYSMVWIHLIAGFAVFML 341 >gi|261401001|ref|ZP_05987126.1| permease, YjgP/YjgQ family [Neisseria lactamica ATCC 23970] gi|269209118|gb|EEZ75573.1| permease, YjgP/YjgQ family [Neisseria lactamica ATCC 23970] gi|309378517|emb|CBX22870.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 356 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 52/363 (14%), Positives = 123/363 (33%), Gaps = 10/363 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +IL + + + +L + +P Sbjct: 1 MNLISRYIIRQMTAMTVYTLLAFLALYSFFEILYETGNLGKGSYGIWEMLGYTALKMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L + ++EL +I G S L+ + ++ ++ Sbjct: 61 AYELMPLATLIGGLLSLGRLAADSELTVIKAGGVSTRKLLSVLSQFGLIFALATAALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + + A A + L+ + + + I I + P++TL GI I + D Sbjct: 121 IAPALNQKAENIKAAAINGKISTGNT-GLWLK-EQNSIINIREMLPDHTLLGIKIWERND 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ D + L + + S ++ + + +++ Sbjct: 179 KNELVQATEAESAVLNDDGSWQLKNIRRSTLGEDKVETSSAAEENLPISVKRNLMEVLLV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K + ++ L + N R + + Y +L + + L+++ R Sbjct: 239 KPDQMSVGELTAYISHLENNR-QNTQIYAIALWHKLVYPVAAWVMALVALAF--TPQTTR 295 Query: 301 QRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 +F + + + F + P+ IL LF + I +I+K+ Sbjct: 296 HGNMGLKLFGGICLGLLFHFAGRLFGFTARLYGVPPFLAGILPTALFALIGI--WLIRKQ 353 Query: 358 YTK 360 + Sbjct: 354 EKR 356 >gi|152981611|ref|YP_001354150.1| hypothetical protein mma_2460 [Janthinobacterium sp. Marseille] gi|151281688|gb|ABR90098.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 376 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 49/363 (13%), Positives = 134/363 (36%), Gaps = 23/363 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ + R + + + I + +++ + + + + ++ + G+ LP Sbjct: 2 IFQRALRRDLLSTAGAVFTTLFTITITVTLIRILGQAAGGKIASSDVVALLGFSALNYLP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + V+T +++E+++ +G S I+PVL + + + + Sbjct: 62 ILLNLTGFVAVLLVVTRSYQDSEMVVWFASGLSLAKWIQPVLMFGLPIVTLTAVLSLFLT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFR-LDDDLYIKISKYNPNNT-LQGIFIVDSRD 180 P + + + F D + + ++T ++ IF+ + Sbjct: 122 PWSNEQSAVYKERYANREDIARVSPGKFQESSSSDRVFFVEGVSGDSTKVKNIFVSSVLN 181 Query: 181 TQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G++++D+ ++++ G + P D +M+F Y + + + + Sbjct: 182 -GKTSVVVAKEGTVEIDQAGDKFLVMHQGRRYDGIPTQSDFELMEFDRYGVLVATQSKAL 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + + L N NN N E R++ L ++ L++I Sbjct: 241 VGDTSARATSTKELLSNRNNFND---------GEILWRVSLPLMGILLMLLAI---PLGF 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-----PYYIPILYLFLFCISSIFLL 352 + + + + I+L + S+ + QN + P+ + L ++ F Sbjct: 289 VNPRGGRSANLLIALFLFVFYSNMLSFAQATVVQNRSTLMLAWWPVHLVALIVVAVFFTW 348 Query: 353 MIK 355 +K Sbjct: 349 RLK 351 >gi|72382010|ref|YP_291365.1| putative permease [Prochlorococcus marinus str. NATL2A] gi|72001860|gb|AAZ57662.1| unclassified ABC-type transport system permease [Prochlorococcus marinus str. NATL2A] Length = 395 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 68/372 (18%), Positives = 137/372 (36%), Gaps = 27/372 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + +IL + S ++ V I I + ++ ++I +P+ + Sbjct: 24 LLDRWILFELLPPLFFSIAAFTVVSLSVGVIFDLIRKIVEIGLPFSVAIQILLLKLPSFV 83 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + T S+N N+E+ + + G S LI P L L+I +S FI N I Sbjct: 84 VISFPMAMLLSTLLAYGSLNDNSEIKALKSIGISVYRLILPGLILSIFMSYMTFIFNNNI 143 Query: 122 EPKCRSTIKQLSAKAQLALTFS-------YLEENLFFRL-----DDDLY--IKISKYNPN 167 P + + A + + + ++ + + K+ + Sbjct: 144 VPSTNKNAEIILANSLGRSFANEQGEDIIFSKKGEILDPYSSYKKNGVTHLFYAWKFI-D 202 Query: 168 NTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKS-- 225 + + ++D ++ A+ G + D+ +G++ SP + KF S Sbjct: 203 GQMLDVTVIDFSKLGFTQMLKAKKGIWNSDKNNWEFFEGDILTLSPDGSNTRT-KFLSFL 261 Query: 226 YTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRP----ELLETYRSEFHKRLTQWLF 281 Y L TE N + + AND NL N Y+ + + +++T + Sbjct: 262 YPLGTELTNIAQLPKDANDMNLGE---ANTAMKLYQSSGNIKEARRMKVRIQEKITLPIA 318 Query: 282 PVIFGLISIV-AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY 340 +F LI ++ + + I + I + + + FS + K NP++ Sbjct: 319 CSVFALIGCSFGVMQKRGGGRSQSFGLSIILILIYYILSFSFSSLGVKGIINPFFAAWSP 378 Query: 341 LFLFCISSIFLL 352 +FL + FLL Sbjct: 379 VFLSMLGGGFLL 390 >gi|317969817|ref|ZP_07971207.1| permease [Synechococcus sp. CB0205] Length = 400 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 44/352 (12%), Positives = 111/352 (31%), Gaps = 22/352 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + ++ + L ++ V + + + V+ + L K+ +P L Sbjct: 27 LLDRWLFAEMLGPLLFGIAAFTAVSLSVGVVFELVRKVAEAGLPLWAAGKVLALRMPGFL 86 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P M T + ++ ++EL + + G ++ P L LA L+++ F+ ++I Sbjct: 87 VLSFPMATLMATLLAFSRLSGSSELTALRSIGVKTWRMVVPALVLAALMTLLTFVFNDVI 146 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLY---------------IKISKYNP 166 P + + A + +N+ + + ++ Sbjct: 147 VPSANYSASNVLDSALGRALSAQTGKNVVYSRFGRITPKEPGGNAGEGLTQLFYAKEF-K 205 Query: 167 NNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKS- 225 N +QG+ ++D ++ A + D +R +G + + + + S Sbjct: 206 NGEMQGVTLLDFSREDQQQVLTANTAVWDENRAMWEFRNGRILNIDAANNFTTSANYTSY 265 Query: 226 -YTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNY-RPELLETYRSEFHKRLTQWLFPV 283 Y + + A ++ + R ++ + Sbjct: 266 YYPFTRAPQDVGMLPSDAAQMTVAQARRAEALLVQAGDQKEARRLRVRIQEKFAFPAICL 325 Query: 284 IFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY 335 +FGLI + + + IS+ + FG + + Y Sbjct: 326 VFGLIGSSLGVRPNS--RTSRSQGFGISVLLIFGYYLMSFIFSSLGIKGTLY 375 >gi|149927923|ref|ZP_01916173.1| hypothetical protein LMED105_07563 [Limnobacter sp. MED105] gi|149823362|gb|EDM82595.1| hypothetical protein LMED105_07563 [Limnobacter sp. MED105] Length = 379 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 44/357 (12%), Positives = 126/357 (35%), Gaps = 21/357 (5%) Query: 10 RCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCF 69 + ++ + + + I +++ + + + + LP Sbjct: 9 KDFAQTAGATFVALFTIIVTTVLVRTLGQAAGGKVDNAEVFTLILLGGLQYLPAALVITV 68 Query: 70 AMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTI 129 + V++ + E+ +G S +L++PVL A+ L++ + + P ++ + Sbjct: 69 FIAVMGVVSRAFKEQEMTAWFASGVSLFSLVRPVLRFAVPLTVLALVCSVWLTPWAKAEL 128 Query: 130 KQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN--NTLQGIFIVDSRDTQTHKIY 187 + S + F + + + ++ +F+VDS T + Sbjct: 129 DAAKDRFAKRSDVSKVSAGQFRESGEGNRVFFVERQSEVTKQVENVFVVDS-KGDTRTVV 187 Query: 188 YAQSGSIDLD---RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAND 244 A GS+++D + ++L+ G + + +F++Y L ++ + + Sbjct: 188 SAARGSVEVDASGQPYLVLSGGRRATLDGTGERFTSTEFETYGLAIDNTLGAAPSFQLQH 247 Query: 245 QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKK 304 + + L+ + + E R++ + ++ GL++I A + + Sbjct: 248 RRVDLLI----------ADFSPAAQGELLWRVSLPMSALVLGLLAIPLA---FVNPRGGN 294 Query: 305 IHPIFISLSISFGVFWGFSYIIHKIEQNP--YYIPILYLFLFCISSIFLLMIKKKYT 359 +L I S + + +++ ++ + +LLM+K+ Sbjct: 295 SLNQLFALLIYLTYSNIVSVTQSMVTKETLDFWVALVLPHASVLLMFYLLMVKRNRP 351 >gi|237653449|ref|YP_002889763.1| permease YjgP/YjgQ family protein [Thauera sp. MZ1T] gi|237624696|gb|ACR01386.1| permease YjgP/YjgQ family protein [Thauera sp. MZ1T] Length = 360 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 34/271 (12%), Positives = 94/271 (34%), Gaps = 7/271 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F + R ++ + + I +++ + + + ++ + G+ LP Sbjct: 2 IFRRALQREFAQTAAAVFVALFAILISTVLIRLLGQAAGGRVPPDAVVALIGFGALAQLP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 V + L+ R++E+++ +G I+PVL A+ + + + Sbjct: 62 TVLTLTLFIAILVSLSRSYRDSEMVVWFASGVPLTAWIRPVLMFALPVVLVAGGGSLYLT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP--NNTLQGIFIVDSRD 180 P + + + + + +F + + + ++ +F+ + Sbjct: 122 PWSQQKSAEYRERLENRDDTHRVAPGVFRESASAQRVFFVEVGAGEDGRVRNVFVSEQTR 181 Query: 181 TQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + + G + D ++L G + +P + + +M+F Y +Q E + Sbjct: 182 SGQLVVIASAEGYLRGDADGRRFVVLEKGRRYDGTPGTPEYRVMEFDRYEVQVEQKQVAG 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETY 268 + + LL P EL+ + Sbjct: 242 QQARIRALPTAVLLAQPE--PRGLGELVGRF 270 >gi|237745416|ref|ZP_04575896.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] gi|229376767|gb|EEO26858.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] Length = 347 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 43/335 (12%), Positives = 126/335 (37%), Gaps = 23/335 (6%) Query: 30 IQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLII 89 + +++ + + + + ++ + G+ +P++ + V+T +++E+++ Sbjct: 1 MMLIRILGQAAKGRVASDDVMALIGFTSLNYMPIILILTGFVSVLLVVTRSYQDSEMVVW 60 Query: 90 DNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENL 149 +G S ++PV+ A+ + + + + P + + + + + Sbjct: 61 FASGLSLTRWLRPVMEFALPIVVLVTLLGFFATPWAYRQSAEYRERFEKREDIARISPGK 120 Query: 150 FFRL-DDDLYIKISKYNPN-NTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQA---IILN 204 F + K + + + ++ +FI SR+ + +Q+G+++ + + ++L Sbjct: 121 FQESAAAQRVFFVEKMSEDLSKVKNVFINSSRNGKI-TTVVSQNGTLETNEKGEKFVVLE 179 Query: 205 DGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPEL 264 DG + ++P D IM+F+ YT TI + ++++ L + Sbjct: 180 DGIRYDETPDQSDFRIMEFEKYTAYIAPKGEVTIS-DISTRSMTTL--------ELVTDT 230 Query: 265 LETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGV-----F 319 E R+ P + L+ ++A + + + + I++ + F Sbjct: 231 TSKKLGELVWRIG---LPFMATLLMLLAIPLGFVNPRAGRSFNLIIAVLLYMTYSNLSSF 287 Query: 320 WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 K+ + P+ I +F + Sbjct: 288 IQAYVAQQKLAFGLAWWPLHLSVALVIVLLFAWRL 322 >gi|85374865|ref|YP_458927.1| permease [Erythrobacter litoralis HTCC2594] gi|84787948|gb|ABC64130.1| predicted permease [Erythrobacter litoralis HTCC2594] Length = 437 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 54/365 (14%), Positives = 127/365 (34%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 S + YI R + + + + ++L+ + V+ + ++ K+ G LIP Sbjct: 31 SIDRYIFRLTIVPMMAVFVLAASLLLLDKMLRLFDFVAVEGGPIGVVFKMLGALIPEYAS 90 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + + ++EL ++ G L++ + +L I+ Sbjct: 91 LAIPLGLLLGILFAFRKLATSSELDVLRAVGMGYGRLLRVPYIITAILVAVNVALVFYIQ 150 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSRDT 181 P R +QL + + + ++ F L D + ++I + N L+GIF S D Sbjct: 151 PISRYYYEQLEYELRSGALGASIKVGEFTTLADRMALRIEESEDNGRNLKGIFARVSNDK 210 Query: 182 QTHKIYYAQSGSI-----DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 A+ GS D + L DG + + ++ ++ F + L + Sbjct: 211 GQVLSISAREGSFLATTDSSDTIILRLTDGTIVQ-DTGNQTPRVLSFTRHDLPIDLPAIE 269 Query: 237 TIVLK---ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + + L LL+ ++ + + ++ F+ RL + + + + Sbjct: 270 QFRQRGDAEREYILPELLSIGWSDTESEAK-RDASQASFNFRLVE-----VVMMWLLPLL 323 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWG-----FSYIIHKIEQNPYYIPILYLFLFCISS 348 + ++ + + +SI V + + +P LF Sbjct: 324 ALSLAIPPKRSTSALGVFVSIVMVVSYHKVNQYGEDVAALGRVDPIVALWGPFVLFAALI 383 Query: 349 IFLLM 353 +++ Sbjct: 384 LWMFW 388 >gi|307155108|ref|YP_003890492.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 7822] gi|306985336|gb|ADN17217.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 7822] Length = 405 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 50/375 (13%), Positives = 129/375 (34%), Gaps = 24/375 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPT 59 + + YI + +++S + + + N V + LKI Y +P Sbjct: 33 ISLMDRYIATQLIPPYILSVGLFTSMGVAIANLSDLSNKVLEYDLPIVDALKILLYRVPE 92 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 P + T ++ +EL+ + + G S P + L+++++ FI Sbjct: 93 FFSYALPISVLLTTLMTYGRLSSESELIALRSCGISLWRATIPAVMLSLIVTGLTFIFNE 152 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLF------FRLDDDLY-------IKISKYNP 166 + P+ + K + +++F +L + K++ Sbjct: 153 CVVPETNYRATGILVKVLHEERHFWQNKDIFYPNYEQIKLPNGQTLRQLKSLFYAEKFD- 211 Query: 167 NNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKS- 225 +Q + I++ + ++I + + + D+ DG V+ + + FK Sbjct: 212 GQKMQSLTIINWLGERLNEIVVSDTAQWNSDQNIWDFFDGTVYLIDGNAAYKEAVTFKHQ 271 Query: 226 -YTLQTESANSSTIVLKANDQNLSFLLN-PNPNNPNYRPELLETYRSEFHKRLTQWLFPV 283 + L E+ ++ + NL + N + + + + +++ + Sbjct: 272 QFPLPKEAFEFASQGRSPYEMNLFQAVQYKNLLQESGDTKNVRFFEVRIQQKIAFPFICL 331 Query: 284 IFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YL 341 +FG++ K + + + +++ I F + ++ P + +L Sbjct: 332 VFGVMGAAIGAKPQQMSRGTS---LGLTVGIVFAYYMV-NFFTGSFGMIGLLSPSMAAWL 387 Query: 342 FLFCISSIFLLMIKK 356 F I ++KK Sbjct: 388 PNFFGVGIGGWILKK 402 >gi|126658379|ref|ZP_01729528.1| hypothetical protein CY0110_27505 [Cyanothece sp. CCY0110] gi|126620311|gb|EAZ91031.1| hypothetical protein CY0110_27505 [Cyanothece sp. CCY0110] Length = 394 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 48/380 (12%), Positives = 132/380 (34%), Gaps = 25/380 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPT 59 + + Y+ + FL + + + + V+ S L++ ++I +P Sbjct: 20 LSIMDRYLFIELLLPFLFGMGIFTSLGLSIGTLFDLVRRVTESGLMLSVAMRILVLKMPG 79 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + + P + + ++ ++E++ + + G S LI PV+ ++++ FI + Sbjct: 80 FVSLAFPMAMLLAALMAYSRLSSDSEIIALRSLGVSVYRLIIPVILFGLVVTGCAFIVND 139 Query: 120 IIEPKCRST----IKQLSAKAQLALTFSYL---EENLFFRLDDD------LYIKISKYNP 166 I P +++ + + + E D +YN Sbjct: 140 WIAPAATHEAALTLQRAVNQERPDFKERNIVYPEYKTIQEEDGQQATVLTRLFYAEEYNG 199 Query: 167 NNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSY 226 + ++G+ I+D ++I ++S + ++ +G ++ +P +I++F+ Sbjct: 200 D-KMKGLTILDRTQEGVNQIVTSESATWNISSNTWDFFNGTIYLIAPDGSYRNIVRFQHQ 258 Query: 227 TLQTESANSSTIVLKAN--DQNLSFLLNPNPN-NPNYRPELLETYRSEFHKRLTQWLFPV 283 L A + N + ++ + + + + ++ + Sbjct: 259 QLALPRAPLDLANRRQNFTEMTIAQTKEYLKAMQLSGDEKRVRKVKVRLQEKYAMPFVCL 318 Query: 284 IFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 IFG++ + K + + + FG + P L +L Sbjct: 319 IFGVVGAAIGVRPQNT---NKATSFGVCVGLIFGYYLLAFMSTSLGIW-GILTPFLGAWL 374 Query: 344 ---FCISSIFLLMIKKKYTK 360 +++ LL+I+ + Sbjct: 375 PNILGLTAGSLLLIQSARLR 394 >gi|197287277|ref|YP_002153149.1| permease [Proteus mirabilis HI4320] gi|194684764|emb|CAR46793.1| putative permease [Proteus mirabilis HI4320] Length = 365 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 54/365 (14%), Positives = 133/365 (36%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R +S + ++ I + ++++ + N+++ + IP + Sbjct: 2 IIIRYLARETLKSQIAILFILMLIFFSQKLVEILGAAVEGNIPTNLVVSLLWLGIPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + + +E+ +++ G + L++ L L++L S+ + + Sbjct: 62 LILPLSLFLGLLMTYSKLYVESEITVMNACGIGKKALVQAALLLSLLTSVLAAGNVVWLI 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLF-FRLDDDLYIKISKYNPNNTLQGIFIVDSR-- 179 P +Q+ A+ + + L E F D ++ + + N Q +F+ R Sbjct: 122 PWSSVHQEQVLEDAKANPSLAALMEGQFKMSSDRNMVLYLGSV-KGNQFQDVFLAQLRPT 180 Query: 180 DTQTHKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 Q + A G + Q ++L++G + + + +D I F Y S+ Sbjct: 181 QNQRPSVVVADKGYTKELPNGNQVVVLSEGTRYEGTAVLRDFRITDFTDYQAVIGHREST 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + ++ L + +EFH RLT VI L+ + Sbjct: 241 ISRNRVEQKTMNELWHSTEPES----------IAEFHWRLTLIFSVVIMALMVVP--LSE 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 RQ + + + L + VF+ + + P++ ++ L ++ Sbjct: 289 VNPRQGRVLSMLPAML--LYLVFFLLQSSLRSSGEKGKVDPLIAMWTVNGIYFALALLLN 346 Query: 357 KYTKI 361 + + Sbjct: 347 AWDTL 351 >gi|172036942|ref|YP_001803443.1| putative permease YjgP/YjgQ [Cyanothece sp. ATCC 51142] gi|171698396|gb|ACB51377.1| putative permease YjgP/YjgQ [Cyanothece sp. ATCC 51142] Length = 394 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 45/346 (13%), Positives = 119/346 (34%), Gaps = 23/346 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPT 59 + + Y+ + FL + + + + V+ S L++ +KI +P Sbjct: 20 LSIMDRYLFIELLLPFLFGMGIFTSLGLSIGTLFDLVRRVTESGLMLSVAMKILVLKMPG 79 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + + P + + ++ ++E++ + + G S LI PV+ ++++ FI + Sbjct: 80 FVSLAFPMAMLLAALMAYSRLSSDSEIIALRSLGVSVYRLIIPVILFGLVVTGCAFIVND 139 Query: 120 IIEPKCRSTIKQLSAKA----QLALTFSYL----------EENLFFRLDDDLYIKISKYN 165 I P +A + + E+ + L +YN Sbjct: 140 WIAPAATHEAAVTLQRAVNQERPDFKERNIVYPEYKTVQEEDGQQVTVLTRL-FYAEEYN 198 Query: 166 PNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKS 225 + +QG+ I+D ++I ++S + ++ +G ++ +P +I++F+ Sbjct: 199 GD-KMQGLTILDRTQEGVNQIVTSESATWNISSNTWDFFNGTIYLIAPDGSYRNIVRFQH 257 Query: 226 YTLQTESANSSTIVLKAN--DQNLSFLLNPNPN-NPNYRPELLETYRSEFHKRLTQWLFP 282 L A + N + ++ + + + + ++ Sbjct: 258 QQLALPRAPLDLANRRQNFTEMTIAQTQEYLKAMQLSGNEKRVRKVKVRLQEKYAMPFVC 317 Query: 283 VIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHK 328 +IFG++ + K + + + FG + Sbjct: 318 LIFGVVGAAIGVRPQNT---NKATSFGVCVGLIFGYYLLAFMSTSL 360 >gi|89094618|ref|ZP_01167555.1| hypothetical protein MED92_00295 [Oceanospirillum sp. MED92] gi|89081088|gb|EAR60323.1| hypothetical protein MED92_00295 [Oceanospirillum sp. MED92] Length = 358 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 51/354 (14%), Positives = 130/354 (36%), Gaps = 21/354 (5%) Query: 16 FLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTN 75 ++ I + ++ ++ ++ ++L I Y +P L ++ P + Sbjct: 1 MFAVSAVLLVIIMSGRFVKYLSRAAAGELDPSVLFSIMAYRLPGFLELILPLGLFLGFLL 60 Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAK 135 + +E+ +++ TG S+ L+ + AI +++ + + P S ++ Sbjct: 61 GYGRLYLESEMTVLEATGMSQKRLVSYSMGPAIFVAVIVGSLSLFVSPYGASETNKIFDD 120 Query: 136 AQLALTFSYLEENLFFRLDD-DLYIKISKYNPNNTLQGIFIVDSRDTQTHK-IYYAQSGS 193 + L F + + + + TL +F+ D + I A++GS Sbjct: 121 QEGRSELESLVPGRFQKNKNTGRVTYTDEVKDDGTLGLVFMADRNHSTQRLQITVAETGS 180 Query: 194 I----DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSF 249 D ++ ++L +G + P D ++FK Y + E N K + Sbjct: 181 TLIDQDKGQRFLVLEEGYRYEGEPGQSDYVEVEFKRYGSEVERRNQEIRYDKVEALPTAM 240 Query: 250 LLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIF 309 L + ++++ + RL+ + ++ L+++ R RQ + + Sbjct: 241 LWGSEEPS----------HQAQLNWRLSLPVLALVVTLLAVP--LSRVNPRQG-RFARLV 287 Query: 310 ISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI--KKKYTKI 361 S+ I S + + +++ F ++ L MI + ++++ Sbjct: 288 PSILIYLTYITILSNTTSNVSEGETSPLTIWIVHFVFAAFALNMILFGRFWSRV 341 >gi|295690097|ref|YP_003593790.1| permease YjgP/YjgQ family protein [Caulobacter segnis ATCC 21756] gi|295432000|gb|ADG11172.1| permease YjgP/YjgQ family protein [Caulobacter segnis ATCC 21756] Length = 400 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 61/369 (16%), Positives = 129/369 (34%), Gaps = 15/369 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + Y+LR + + V + +IL+ ++ +S S+ + +++ L+P Sbjct: 6 MRLIDRYLLRLLFWPLVGCLGVTVVALLLERILRLLDALSQSSARFGYVAQLAANLVPHY 65 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P F + V+ ++ +E+ + +G S + P L + + LS+F I Sbjct: 66 LGLALPVAFFVALFIVIAKLSDGSEVDALLASGQSLERIAAPFLAVGLFLSVFSLIVFGY 125 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 ++P R + + A A L F L S +L +FI Sbjct: 126 MQPYSRYAYRAVMHAAINAGWNGRLAGGAFIDDKGSLLTADSADIAGQSLTRVFIRRLDA 185 Query: 181 TQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 +I A S ++ +D + L DG + + F S T QT A ++ Sbjct: 186 KGREEIITAGSANLKMDPGGKTVTMDLRDGRRI-VRDDNGQYRNLAFNSLTTQTPLAAAA 244 Query: 237 ----TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + L L + + T SE + RL + F + ++A Sbjct: 245 VLLRDRGGDERELTLGELATQAKSPHPVVSK--STLLSELYGRLARAAF---LPFLPLLA 299 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-PYYIPILYLFLFCISSIFL 351 ++ + + ++ + + + P +++ SS + Sbjct: 300 FPLGLASKRGNRAAGLIMAGVLLLAFQHALLLGQSLAKADKVAAAPAIWIPFALFSSFAV 359 Query: 352 LMIKKKYTK 360 + T+ Sbjct: 360 WLFLGSRTR 368 >gi|294508120|ref|YP_003572178.1| Conserved hypothetical protein containing permease domain [Salinibacter ruber M8] gi|294344448|emb|CBH25226.1| Conserved hypothetical protein containing permease domain [Salinibacter ruber M8] Length = 492 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 43/282 (15%), Positives = 110/282 (39%), Gaps = 13/282 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 ++ +LR + F ++F+ + +++ + ++ +++++++ Y + + Sbjct: 21 LRRLHWIVLRRLPGPFFGWLGTLMFLLLMQFLIRWLPEIAGKGIPVSVIVELIAYNLAYM 80 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + + + +I +TG S ++ P L +A LL + N+ Sbjct: 81 VVLAVPMSVLLAALMAFGELAESQYYTVIKSTGISFGQIVWPALVVAALLMGGMLYFNNV 140 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVD-S 178 + P+ +QL + + L +F+ +D I + P N L + I D + Sbjct: 141 MLPEANHRARQLWSDIRGKRPGFELRPGIFYEDMEDYSILVQDRPPGTNKLIDVTIYDYT 200 Query: 179 RDTQTHKIYYAQSGSIDL----DRQAIILNDGEVHRKSP-----ISKDISIMKFKSYTLQ 229 + + A+ G I+ R + L +GE+HR P S+ + F + ++ Sbjct: 201 QGRDRQAVIKAERGVIESSAGGARLTLTLRNGEMHRPLPPDANNQSERYERLTFDRHRIR 260 Query: 230 TESANSSTIVLKAND--QNLSFLLNPNPNNPNYRPELLETYR 269 +N ++ + ++ + P + + R Sbjct: 261 FTLSNVVFRRSESEETARSTRTMRTPRLLDTLDSLKTERDAR 302 Score = 41.9 bits (97), Expect = 0.15, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 45/101 (44%), Gaps = 6/101 (5%) Query: 256 NNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSIS 315 + ++ + +Y+ EF+K+ + L +IF +V A +R+ ++L I Sbjct: 370 RDTEWQTRRIRSYQVEFYKKFSIALACLIFM---VVGAPLGLALRRGGLATIGAVALGI- 425 Query: 316 FGVFWGFSYIIHKIEQNPYYIP--ILYLFLFCISSIFLLMI 354 F ++W K+ + ++ P +++ +S L +I Sbjct: 426 FMLYWITLVQGEKLSERGFFPPWLGMWIANLLMSGAGLWLI 466 >gi|254527024|ref|ZP_05139076.1| unclassified ABC-type transport system permease [Prochlorococcus marinus str. MIT 9202] gi|221538448|gb|EEE40901.1| unclassified ABC-type transport system permease [Prochlorococcus marinus str. MIT 9202] Length = 401 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 60/376 (15%), Positives = 135/376 (35%), Gaps = 23/376 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + ++L I + + I+ V + I + L + LK+ + +P+ L Sbjct: 25 LIDRWLLGQIIPPMVFAISAFTVISLSVGVMFDLIRKIVEYGLPLFLALKVLFFSLPSFL 84 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + T ++ N+ELL + + G +I P + L+I ++ F + + Sbjct: 85 VLSFPMAVLLSTLLAYGKLSSNSELLALKSLGIKTSRIIAPAIALSIFMTGLTFYFNDNL 144 Query: 122 EPKCRSTIKQ-LSAKAQLALTFSYLEENL-FFRLDDDL---------------YIKISKY 164 PK + L A + + +EN+ F R + +I +++ Sbjct: 145 VPKSNKLAEATLRAGIGSSFSEEEGKENIMFSRYGSRINASTKKPTKNNSKLTHIFYAQW 204 Query: 165 NPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK 224 N ++ + ++D +I A S D + I + G + +P + +I KFK Sbjct: 205 YKNKLMENVTLLDFSREDLQQILKADSARFDKKNSSWIFSKGSIVSITPSGQTTNI-KFK 263 Query: 225 SYTLQTESAN--SSTIVLKANDQNLSFLLNPNPNNPNYRP-ELLETYRSEFHKRLTQWLF 281 YT + + AN+ L + + + + ++ T Sbjct: 264 EYTYPFVEGPMELAKVPKDANEMTLKQAIQAEKIYKKTGNIKEVRRIKVRIQEKFTLPFA 323 Query: 282 PVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL 341 ++FGLI + ++ +R K + I F + ++ + +L Sbjct: 324 CLVFGLIG-SSLGSKSNLRSSKSQGFGLSVILILIYYVMSFIFSSFGVKGILPAVFAAWL 382 Query: 342 FLFCISSIFLLMIKKK 357 + + +++K Sbjct: 383 PVLISLGGGIYLLRKS 398 >gi|88703588|ref|ZP_01101304.1| Predicted permease YjgP/YjgQ family protein [Congregibacter litoralis KT71] gi|88702302|gb|EAQ99405.1| Predicted permease YjgP/YjgQ family protein [Congregibacter litoralis KT71] Length = 362 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 54/350 (15%), Positives = 124/350 (35%), Gaps = 23/350 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + L ++ I + ++ + +S + ILL + Y +P L Sbjct: 2 KLRGYLAGDVLGHTLAVSSVLLAIILTGRFVKYLAEAASGKLAAEILLPVMFYRLPGFLE 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E++I+ G L L A+L+ + + ++ Sbjct: 62 LLLPLGLFIGILMSYGRLYVESEMVILSACGVGPAKLASFTLAPALLIMLVVAGLSLLVT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYNPN-NTLQGIFIVDSRD 180 P+ + + L Q L F DD + + +P L +F+ D Sbjct: 122 PQGVARSEALLNDPQALQGLQLLAAGRFQPRGDDGTVTYAADIDPEAGELDQVFLYAPED 181 Query: 181 TQTHK----IYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 + A+ GS+ +D ++ + L DG +P D I++F ++ + Sbjct: 182 RTADTEVAGVTVARRGSVVVDPESGVRYLELRDGYRFSGTPGRADYRIVRFGTFGQRLPD 241 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 S + + + LL+ + R+ H RL+ L + +++++A Sbjct: 242 TPSMARSEPVDAKPTAALLDSDNAED----------RAALHWRLSVAL---MVPVVALLA 288 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 +R + + +L + + + I + + +YL Sbjct: 289 LSLSKTNHRRGRYIKLAPALLLHLSYLFALASIRTSVAEGDAPAYQMYLL 338 >gi|237736827|ref|ZP_04567308.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817] gi|229420689|gb|EEO35736.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817] Length = 360 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 56/361 (15%), Positives = 127/361 (35%), Gaps = 15/361 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI + +SF++S + + I V Q+ + + +S + + L+P Sbjct: 1 MKIIDKYISKNFIKSFMLSLMAFMGIFIVSQLFRVVKYLSDGRFTPGDAVYYIITLLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 V P + + ++SM N E++ + +G ++ + ++ ++S +F + Sbjct: 61 FIDVAPLAVLLGSMMTISSMASNLEIISLKTSGIKFRRIVLFPIIISAIISGVVFFVNDT 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKY--NPNNTLQGIFIVDS 178 + P + L + + N F R +D YI + + + I IVD Sbjct: 121 LYPISLKINRDLRSGEVQKRVAPLEKRNAFLRGEDSNYIYLMQKVNRETGFAENIEIVDL 180 Query: 179 RDT--QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + +I A G + ++ +L D ++ K + F + Sbjct: 181 NKSFDKIERIITAPEGRYNFGKKVWMLKDVNIYYGDDNKKPETKEFFSDSKYGDNPEHFI 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 T+ ++ + L + + E E R + + + + Sbjct: 241 TLTVEPRTLTIKDLKKTIREMKSIGGDTRE-LLVELGNRYSFPFASFVISFLGLALGG-- 297 Query: 297 ALVRQRKKIHPIFISLSISFG-----VFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 R + + + + + G V F + NP+ + +F + I+L Sbjct: 298 ---RYVRGTSAVSLGICVLLGYGYYVVQASFEALSANGFLNPFVGGWIPNIMFLVVGIYL 354 Query: 352 L 352 L Sbjct: 355 L 355 >gi|307824320|ref|ZP_07654546.1| permease YjgP/YjgQ family protein [Methylobacter tundripaludum SV96] gi|307734700|gb|EFO05551.1| permease YjgP/YjgQ family protein [Methylobacter tundripaludum SV96] Length = 383 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 53/321 (16%), Positives = 115/321 (35%), Gaps = 18/321 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + + R+ L IV I Q ++ ++ S L+ + G Sbjct: 23 TVLDKMVALDLLRTLLAVWSVIVVIIVSRQFIRILDRAVEGQVSNQTLMTVLGLKTIIAS 82 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P M VL M R+ E+ + + G T+ + + L LS+ + Sbjct: 83 AAFLPAALFMAVLMVLGRMYRDQEMSAVASAGGGAGTVYRSIFLLVFPLSVLSAGLSFYV 142 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFR-LDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + +++L + + + + F DL + K + + T+ +F+ R Sbjct: 143 SPWAEAMMEELMHQDKESADLRGIAAGKFSEYSQGDLVFYVEKIDDDKTMHEVFVQ-HRQ 201 Query: 181 TQTHKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 I A+ G + D + I+L +GE + P + + + +F Y ++ E+ S+ Sbjct: 202 GDRLAIINAEVGRLRDLPDGRYIVLENGERIQGQPGTVNYVLEQFTEYAVRMETKESAAN 261 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 K + + + + N+ +E +R + P+ L+S +A + Sbjct: 262 FGKESVASGTLASSGQIND-----------IAELQRRFS---IPMGIVLLSFIAVPLAQM 307 Query: 299 VRQRKKIHPIFISLSISFGVF 319 + + + I F Sbjct: 308 SPRGGVYGNMLVGFLIYFSYG 328 >gi|262373934|ref|ZP_06067211.1| permease [Acinetobacter junii SH205] gi|262310945|gb|EEY92032.1| permease [Acinetobacter junii SH205] Length = 366 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 53/355 (14%), Positives = 124/355 (34%), Gaps = 16/355 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + + L+ + I Q+++ + +LL I Y +P L Sbjct: 2 IIRRYLVKQVVSTSLVVTALLTLIIMGGQLIKIFGRAAQGRLDAGVLLSIIAYRLPEFLT 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + V + + E+ +++ +G SR L K +L + + + Sbjct: 62 LILPLGFFIGLMLVFGRLYVDHEMAVLNGSGVSRNQLAKLLLPMTFVYLLVQSFLMFWGS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVD--SR 179 + L + F + F I + + L+ IF R Sbjct: 122 SSGIRAYESLMQTQAVRAGFDLVRPKEFISSGP-YTIYAGSLSEDRKNLKDIFYYQKAER 180 Query: 180 DTQTHKIYYAQSGS----IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + + + A+ + + + L G + P + +F+SY L+ E N Sbjct: 181 EDKPDVMILAKEATRVEMANDTANVVDLVQGRRYEIYPNQPRYTQAEFQSYRLRLE--ND 238 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 I +++D + + ++ RSE R+ ++ L+++ ++ Sbjct: 239 KDIKFESDD------VEALSMSKLWQKRDDSVVRSELGWRIFGPFVILVALLLAVALSEV 292 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 + ++ P + + I K E + + P++ L ++IF Sbjct: 293 SPRQGRYYRLIPAIFIFASLIVLMIAIKTRISKEELDIWAYPVVLLVYAIAAAIF 347 >gi|134095577|ref|YP_001100652.1| hypothetical protein HEAR2400 [Herminiimonas arsenicoxydans] gi|133739480|emb|CAL62531.1| putative permease [Herminiimonas arsenicoxydans] Length = 347 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 47/314 (14%), Positives = 116/314 (36%), Gaps = 18/314 (5%) Query: 32 ILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDN 91 +++ + + + ++ + G+ LP++ M V+T +++E+++ Sbjct: 2 LIRILGQAAGGKVASADVVALIGFSALNYLPIILNLAGFMSVLLVVTRSYQDSEMVVWFA 61 Query: 92 TGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFF 151 +G S I PVL A+ + + + + P + + + F Sbjct: 62 SGLSLARWIPPVLVFALPIVVMTTLLSLFLTPWSNQQSAIYKERYANREDIARVSPGKFQ 121 Query: 152 R-LDDDLYIKISKYNPNNT-LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQA---IILNDG 206 D + +++ ++ IF+ R+ + A+ G++++D ++++ G Sbjct: 122 ESSSSDRVFFVEGVAGDSSKVRNIFVSSVRN-GKTSVVVAKEGTVEIDPAGDKFLVMHQG 180 Query: 207 EVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLE 266 + P D +M+F Y + S + + + + + L N NN N Sbjct: 181 RRYDGVPTQSDFQLMEFDRYGVLVASQSQALVGDTSARALTTQELLRNRNNFND------ 234 Query: 267 TYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYII 326 E R++ L V+ L++I + + + + I+L + SY Sbjct: 235 ---GELLWRVSLPLMGVLLMLLAI---PLGFVNPRGGRSANLLIALFLFVFYSNMLSYAQ 288 Query: 327 HKIEQNPYYIPILY 340 + QN + + Sbjct: 289 AIVVQNRAAFMMAW 302 >gi|322834556|ref|YP_004214583.1| permease YjgP/YjgQ family protein [Rahnella sp. Y9602] gi|321169757|gb|ADW75456.1| permease YjgP/YjgQ family protein [Rahnella sp. Y9602] Length = 364 Score = 126 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 50/364 (13%), Positives = 129/364 (35%), Gaps = 19/364 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETFKSQFAILFILLLIFFCQKLVRVLGAAVDGDIPTNLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + ++E+ ++ G + +L+ L LA+ S+F ++ + Sbjct: 62 LILPLSLFLGLLMTLGKLYTDSEITVMHACGLGKRSLVIAALVLALFTSVFAGVNAIWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + + + E F + + + +F+ R Sbjct: 122 PWSSKHQDEVLAEAKANPSMAAMVEGQFQQAQNGNAVLFVGSVKGKEFHNVFLAQLRPNG 181 Query: 183 T--HKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A G + Q ++L+ G + + + +D + F Y Sbjct: 182 NQRPSVVVADKGHMLQRADGSQQVMLDKGTRYEGTALLRDFRVTDFTDYLAVIGHQAVQL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +++ ++ L N N R+E + RLT + I L+ + Sbjct: 242 DPNQSDQMTMTQLWNSNEPEA----------RAELNWRLTLIVSVFIMALLVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 RQ + + + L S + + P+L+++ + L ++ Sbjct: 290 NPRQGRVLSMLPAILLYLIFFLLQTSLRSNGAKGKLD--PMLWMWGTNLLYFALALVLNA 347 Query: 358 YTKI 361 + + Sbjct: 348 WDTL 351 >gi|319944264|ref|ZP_08018540.1| permease YjgP/YjgQ family protein [Lautropia mirabilis ATCC 51599] gi|319742559|gb|EFV94970.1| permease YjgP/YjgQ family protein [Lautropia mirabilis ATCC 51599] Length = 369 Score = 126 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 57/358 (15%), Positives = 133/358 (37%), Gaps = 21/358 (5%) Query: 9 LRCIGRSFLMSCLFIVFIAWVIQIL-QRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 LR S +F V L + +N +S + + +L + + +P++ Sbjct: 7 LRRDLNSVAGVMFATLFTILVTTSLIRFLNRATSDRIASSDILPLIAFNAIGFIPVLLVL 66 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 + VL R++E++I +G S I+PV+ + + + ++ P Sbjct: 67 TVFLSVLMVLARAWRDSEMVIWFASGQSLTAWIRPVMMFVLPYAAVVAAVTFVLSPWANQ 126 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLD-DDLYIKISKYNPN-NTLQGIFIVDSRDTQTHK 185 I +L + S + F + + +P+ +T+ +F+V + Sbjct: 127 QIAELRERFNQREDVSMVAPGQFRESTSSNRVFFVESMSPDKSTVSNVFVVQHNGPRM-V 185 Query: 186 IYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + ++ G + ++ ++L DG + + + + S+M+F Y ++ + +T + Sbjct: 186 VVASRGGHVKIEENGDRFLVLEDGRRYDGTWGTPEYSLMEFLRYGVRLDPKPVNTQIESV 245 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 L+ ++P R EL P+ +I+++A + + Sbjct: 246 RGMATPDLMQ--LSSPAARGELAYRVG-----------LPISVFVIALLAIPLSFVNPRL 292 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQ-NPYYIPILYLFLFCISSIFLLMIKKKYT 359 + I + I F S + I Q + ++L + + L M +K+ T Sbjct: 293 GSSVNLVIGVLIYFTYSNLNSVVRSWITQEKLSFGVGVWLTHALVLGLALYMFRKRLT 350 >gi|292493019|ref|YP_003528458.1| permease YjgP/YjgQ family protein [Nitrosococcus halophilus Nc4] gi|291581614|gb|ADE16071.1| permease YjgP/YjgQ family protein [Nitrosococcus halophilus Nc4] Length = 374 Score = 126 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 50/321 (15%), Positives = 117/321 (36%), Gaps = 19/321 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + YIL+ + + L ++ I I+ ++ + + +L +S Y L Sbjct: 8 RIVDRYILKELSLNVTAITLVLLLIFGGIRFIRFLGQATEGKVPGETILALSTYEAIGAL 67 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 ++ P + VL M ++E++++ G SR L++ VL ++L+I + + Sbjct: 68 VLLLPLAAFLAVILVLGRMANDSEIVVLFACGISRGHLLRVVLAFGLVLAIGVGCISLYL 127 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNT-LQGIFIVDSR 179 P + +L +A LA S L F + + ++ +FI R Sbjct: 128 GPLASAEGYRLKQEAILAAETSGLVAGNFKKTKGGQWVFYAESLTEDRLGMRNVFIQ-VR 186 Query: 180 DTQTHKIYYAQSGSIDLDR----QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + ++ + G + D + +IL +G + I I +F+ + + + + Sbjct: 187 EPTQKILFRSSRGRLQTDGITGDKHLILEEGYRYDLVGNDVGIRISRFERHGILVKKGGA 246 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 ++ L +E R++ + ++ ++++ A Sbjct: 247 QEFRIRHKTLPTLTLWEMGAP----------KDIAEVQWRVSMPIATLLLVMLAVPLA-- 294 Query: 296 RALVRQRKKIHPIFISLSISF 316 R RQ + + L Sbjct: 295 RLEPRQGRYAGLVPAVLVYVI 315 >gi|319762860|ref|YP_004126797.1| permease yjgp/yjgq family protein [Alicycliphilus denitrificans BC] gi|330824940|ref|YP_004388243.1| permease YjgP/YjgQ family protein [Alicycliphilus denitrificans K601] gi|317117421|gb|ADU99909.1| permease YjgP/YjgQ family protein [Alicycliphilus denitrificans BC] gi|329310312|gb|AEB84727.1| permease YjgP/YjgQ family protein [Alicycliphilus denitrificans K601] Length = 364 Score = 126 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 47/321 (14%), Positives = 123/321 (38%), Gaps = 14/321 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ I + + RSF + + ++ + + +++ + S + + + ++ + G+ + L Sbjct: 2 LFDSSIRKELARSFGATLVVLITVVMTMMLIRVLGQASRGSVAPSDVMLVMGFTVLGQLS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + + L+ M R++E++I + G ++L+ P+L + + + + ++ Sbjct: 62 TILSLSLFVTVVGTLSRMYRDSEMVIWFSAGRGLLSLLAPLLRFSWPIMLAIAALSLVVW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPN-NTLQGIFIVDSRD 180 P I++L + + + F + I K P+ N +FI + + Sbjct: 122 PWANRQIQELKTQYEQRSDVDRVAPGQFQESSNGSRVFFIDKDTPDANAASNVFIATN-E 180 Query: 181 TQTHKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 I AQS I+ + +L++G+ + I +F Y +S + S Sbjct: 181 AHRETITSAQSARIEIRNGERLALLHNGQRLETMLDKPGLRISEFTEYGTLIDSGSQSDP 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 A ++ L +P+ +++E RL + F ++ + A Sbjct: 241 EAGAIKTRDTWDLARDPSP---------RHQAELGWRLGLAFAALNFVVLGLAVAIVNPR 291 Query: 299 VRQRKKIHPIFISLSISFGVF 319 + + + + + + Sbjct: 292 AGRSTSLAFALFAFMVYYNLM 312 >gi|83816098|ref|YP_446193.1| hypothetical protein SRU_2087 [Salinibacter ruber DSM 13855] gi|83757492|gb|ABC45605.1| membrane protein, putative [Salinibacter ruber DSM 13855] Length = 473 Score = 126 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 43/282 (15%), Positives = 110/282 (39%), Gaps = 13/282 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 ++ +LR + F ++F+ + +++ + ++ +++++++ Y + + Sbjct: 2 LRRLHWIVLRRLPGPFFGWLGTLMFLLLMQFLIRWLPEIAGKGIPVSVIVELIAYNLAYM 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + + + +I +TG S ++ P L +A LL + N+ Sbjct: 62 VVLAVPMSVLLAALMAFGELAESQYYTVIKSTGISFGQIVWPALVVAALLMGGMLYFNNV 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVD-S 178 + P+ +QL + + L +F+ +D I + P N L + I D + Sbjct: 122 MLPEANHRARQLWSDIRGKRPGFELRPGIFYEDMEDYSILVQDRPPGTNKLIDVTIYDYT 181 Query: 179 RDTQTHKIYYAQSGSIDL----DRQAIILNDGEVHRKSP-----ISKDISIMKFKSYTLQ 229 + + A+ G I+ R + L +GE+HR P S+ + F + ++ Sbjct: 182 QGRDRQAVIKAERGVIESSAGGARLTLTLRNGEMHRPLPPDANNQSERYERLTFDRHRIR 241 Query: 230 TESANSSTIVLKAND--QNLSFLLNPNPNNPNYRPELLETYR 269 +N ++ + ++ + P + + R Sbjct: 242 FTLSNVVFRRSESEETARSTRTMRTPRLLDTLDSLKTERDAR 283 Score = 41.9 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 45/101 (44%), Gaps = 6/101 (5%) Query: 256 NNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSIS 315 + ++ + +Y+ EF+K+ + L +IF +V A +R+ ++L I Sbjct: 351 RDTEWQTRRIRSYQVEFYKKFSIALACLIFM---VVGAPLGLALRRGGLATIGAVALGI- 406 Query: 316 FGVFWGFSYIIHKIEQNPYYIP--ILYLFLFCISSIFLLMI 354 F ++W K+ + ++ P +++ +S L +I Sbjct: 407 FMLYWITLVQGEKLSERGFFPPWLGMWIANLLMSGAGLWLI 447 >gi|291327104|ref|ZP_06127004.2| inner membrane protein YjgP [Providencia rettgeri DSM 1131] gi|291311564|gb|EFE52017.1| inner membrane protein YjgP [Providencia rettgeri DSM 1131] Length = 343 Score = 126 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 48/286 (16%), Positives = 112/286 (39%), Gaps = 21/286 (7%) Query: 75 NVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSA 134 + + +E+ ++ G + L+K L LA++ ++ + + P +Q+ A Sbjct: 52 MTYSKLYTESEITVMHACGLGKSVLVKAALVLAVITAMVAVANITWMLPWSSQYQEQVLA 111 Query: 135 KAQLALTFSYLEENLFFRLDDDLYI-KISKYNPNNTLQGIFIVDSR--DTQTHKIYYAQS 191 A+ + + E F D Y+ I +N + +F+ R + Q + A S Sbjct: 112 DAKANPGLAAMVEGQFKTTKDGNYVLYIGDVKGSN-FKNVFLAQLRAANEQRPSVVVADS 170 Query: 192 GSIDLD---RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLS 248 G + D RQ ++LN+G + + + +D I F +Y + + T + +N+ Sbjct: 171 GYMKEDPDGRQVVVLNEGTRYEGTALLRDFRITDFVNYQAIVDHQTAETRSDRVEQKNML 230 Query: 249 FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPI 308 L + N N +EFH RLT V+ L+ + ++ ++ + Sbjct: 231 QLWSENTPEVN----------AEFHWRLTIVFSVVVMALM---VVPLSEVNPRQGRVLSM 277 Query: 309 FISLSISFGVFWGFSYIIHKIEQ-NPYYIPILYLFLFCISSIFLLM 353 ++ + F S + + ++ + ++ + +++ Sbjct: 278 LPAMLLYLIFFLLQSTLRNSADKGDLDPRYTMWAVNVGYLILAIVL 323 >gi|320539289|ref|ZP_08038959.1| putative conserved inner membrane protein [Serratia symbiotica str. Tucson] gi|320030681|gb|EFW12690.1| putative conserved inner membrane protein [Serratia symbiotica str. Tucson] Length = 396 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 55/346 (15%), Positives = 131/346 (37%), Gaps = 21/346 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + +++ + V N++L + +P + Sbjct: 34 IIIKYLVRETLKSQIAILFILLLIFFCQNLVRVLGDVVDGDVPTNLVLSLLLLGVPKMAQ 93 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ G + TLI + LAIL S ++ Sbjct: 94 LILPLSLFLGLLMTFGRLYTESEITVMHACGLGKRTLIIAAMILAILTSAVAAVNVFWAN 153 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNTLQGIFIVDSRDT 181 P S + ++A+ + + L E F D + I +T +F+ R Sbjct: 154 PIASSYQDVVVSEAKANPSIAGLVEGQFKPSQDGNAVVFIGNV-KGSTFNNVFLAQLRTN 212 Query: 182 QT--HKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 T + A+ G+I+ + Q + L+ G + + +D I F +Y + Sbjct: 213 GTQRPSVVVAEHGNINPQKDGSQVVTLDKGTRFEGTALLRDFRITDFNNYKAVIGHRAVA 272 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 ++ ++ L + + R+EFH RLT V L++++ Sbjct: 273 VDNTQSEQMSMKTLWQSDDPDA----------RAEFHWRLT---LVVSVVLMALLVVPLS 319 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 + ++ ++ + ++ + F + + + PI++L+ Sbjct: 320 VVNPRQGRVLSMLPAILLYLIFFLLQTALRSNAGK-GKLDPIIWLW 364 >gi|283834896|ref|ZP_06354637.1| inner membrane protein YjgP [Citrobacter youngae ATCC 29220] gi|291069156|gb|EFE07265.1| inner membrane protein YjgP [Citrobacter youngae ATCC 29220] Length = 366 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 48/356 (13%), Positives = 122/356 (34%), Gaps = 17/356 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ SI ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMVLALFTSIIAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A A+ + L + F + + + + + +F+ R Sbjct: 122 PWSSRHQDEVLADAKANPGMAALAQGQFQQATNGSSVLFIESVDGSNFNDVFLAQIRPKG 181 Query: 183 T--HKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F++Y + Sbjct: 182 NARPSVVVADSGHLTQMRDGSQVVTLNKGTRFEGTALLRDFRITDFQNYQAIIGHQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L + + R+E R+T + L+ + Sbjct: 242 DPNDTDQMDMRTLWKTDND----------RARAELTWRITLVFTVFMMALMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 RQ + + + L S + + + ++ ++ +++ Sbjct: 290 NPRQGRVLSMLPAMLLYLLFFLVQTSLKSNGGKGKLDPVFWMWAVNLLYLALAIVL 345 >gi|88810918|ref|ZP_01126174.1| permease YjgP/YjgQ [Nitrococcus mobilis Nb-231] gi|88791457|gb|EAR22568.1| permease YjgP/YjgQ [Nitrococcus mobilis Nb-231] Length = 358 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 49/360 (13%), Positives = 110/360 (30%), Gaps = 20/360 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E Y++ + R + + I + + + S T + + + Sbjct: 1 MLLIERYLIAEVRRPLVAVVGVLSLIFASYSVARYLADALSETLGMQAVALMVALRTLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P L + + E+ ++ G S + +L LA+ +++ + Sbjct: 61 LEVLIPVALYASVVIGLGRLYNDQEMTVLGAVGISSARVYWAILLLALPVALAVGALSLF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF-FRLDDDLYIKISKY-NPNNTLQGIFIVDS 178 P Q A A + + L F I + + L G+ I Sbjct: 121 GRPWAYQQAYQAEAHAHVEIPLDRLRAGHFYVESQTGRMILAQEVDDQRGLLHGVLIY-Q 179 Query: 179 RDTQTHKIYYAQSGSI----DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 R + + A+ D +IL+DG + I++F +L+ + Sbjct: 180 RAGEATYLTKARQARQLPTEQADEARLILHDGVTYLLDQAGSHDRILRFGELSLRLQQPQ 239 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + + + NP +E RL++ L V+ L + Sbjct: 240 PVVGYKRKAAPTAALARSGNPAEL-----------AELQWRLSRPLTTVLLALFGVP--L 286 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R R+ + + +L + +P ++ + + + +I Sbjct: 287 SRTAPRRGRFSKILLAALVYALIYSASGLAKTWVEHGVVGAVPGIWWINAVMFVVLVALI 346 >gi|84622418|ref|YP_449790.1| hypothetical protein XOO_0761 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188578607|ref|YP_001915536.1| putative permease, YjgP/YjgQ family [Xanthomonas oryzae pv. oryzae PXO99A] gi|58425052|gb|AAW74089.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|84366358|dbj|BAE67516.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188523059|gb|ACD61004.1| putative permease, YjgP/YjgQ family [Xanthomonas oryzae pv. oryzae PXO99A] Length = 360 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 55/358 (15%), Positives = 128/358 (35%), Gaps = 19/358 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L +SFL + + ++ ++ ++ + ++ +LL G Sbjct: 1 MPKLDRYLLSDFTQSFLATLIVLLVVSVGGVLVDILGNIADGRIPARLLLSQVGLQFVAY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP++ P + L + R++E+ +I G +++P+L L + + + + + Sbjct: 61 LPIILPLALMLGLLLALARLYRDSEMAVITAIGVGPTRMLRPLLMLVVPVVVVIGLCSLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSR 179 + P T + + A ++ + LE F L D + + + + L IF+ + Sbjct: 121 LGPWASRTAEAMLEDANRSVLMAGLESGQFTPLSDGGVVYMQTISADGKGLGKIFLQ-RQ 179 Query: 180 DTQTHKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISK--DISIMKFKSYTLQTESAN 234 + A G++ + + L+DG D +MKF S + Sbjct: 180 QNDRIDVVTADRGALFFEGKTDRYLHLDDGYRTEGPAGGATLDYRLMKFASSDIALPDRT 239 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + LL+ + R++ H+RL L + F ++++ Sbjct: 240 RLHDANDPEVMWTTQLLS----------DERPAARAQLHERLAPPLLALAFAMLTLP--L 287 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 R+ RQ++ + L+ G L+ + ++ + Sbjct: 288 SRSAPRQQRYGRIMLAFLAYMVGTNLMIVGTQWIANGKAPAALGLWWLTLPLLAVAVW 345 >gi|326626150|gb|EGE32495.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 335 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 48/327 (14%), Positives = 114/327 (34%), Gaps = 22/327 (6%) Query: 33 LQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNT 92 ++ + N++L + G +P + ++ P + L + +E+ ++ Sbjct: 1 MRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHAC 60 Query: 93 GTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFR 152 G S+ L+K + LA+ I ++ P ++ A+A+ + L + F + Sbjct: 61 GLSKAVLVKAAMVLALFTGILAAVNVMWAGPWSSKHQDEVLAEAKANPGMAALAQGQFQQ 120 Query: 153 LDDDLYIKISKYNPNNTLQGIFIVDSRDTQT--HKIYYAQSGS---IDLDRQAIILNDGE 207 + + + + +F+ R + A SG + Q + LN G Sbjct: 121 ATNGSSVLFIESVDGSDFHDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNKGT 180 Query: 208 VHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLET 267 + + +D I F++Y + + ++ L N + + Sbjct: 181 RFEGTALLRDFRITDFQNYQAIIGHQAVALDPNDTDQMDMRTLWNTDND----------R 230 Query: 268 YRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH 327 R+E H R+T + L+ + RQ + +S+ + ++ F I Sbjct: 231 ARAELHWRITLVFTVFMMALMVVP--LSVVNPRQGR-----VLSMLPAMLLYLLFFLIQT 283 Query: 328 KIEQNPYYIPILYLFLFCISSIFLLMI 354 I+ N + + ++ L + Sbjct: 284 SIKSNGGKGKLDPVIWMWAVNLIYLAL 310 >gi|332851503|ref|ZP_08433500.1| permease, YjgP/YjgQ family [Acinetobacter baumannii 6013150] gi|332866797|ref|ZP_08437201.1| permease, YjgP/YjgQ family [Acinetobacter baumannii 6013113] gi|332729956|gb|EGJ61287.1| permease, YjgP/YjgQ family [Acinetobacter baumannii 6013150] gi|332734405|gb|EGJ65525.1| permease, YjgP/YjgQ family [Acinetobacter baumannii 6013113] Length = 341 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 49/327 (14%), Positives = 120/327 (36%), Gaps = 16/327 (4%) Query: 31 QILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIID 90 ++++ + + +IL I GY +P L ++ P F + V + + E+ +++ Sbjct: 5 RLIKYFGVAAQGRLDASILFSIIGYRLPEFLTLILPLGFFIGLMLVFGRLYVDHEMAVLN 64 Query: 91 NTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLF 150 +G +R L + ++ + ++ + + + P ++L+ + F + F Sbjct: 65 GSGVNRHQLARLLIPMTLVYMVCQSVLMLWMTPWGLREFEKLTTTQAVRTGFDLVRPREF 124 Query: 151 FRLDDDLYIKISKYNPNNT-LQGIFIVDS--RDTQTHKIYYAQSGS---IDLDRQAII-L 203 I + + L+ IF ++ + + A+ + + D ++ L Sbjct: 125 ISSGP-YTIYAGSLSEDRKNLKDIFFYQRAAKEGKPDVMILAKEATRVEVANDTANVVDL 183 Query: 204 NDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPE 263 G + P + +F+SY L+ E+ + + L N+P Sbjct: 184 VQGRRYEIFPGQPKYTQAEFQSYRLRLENDKDVKFESGDVEALSTSKLFSKANDPVV--- 240 Query: 264 LLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFS 323 RSE RL +I ++S+ ++ + ++ P + + Sbjct: 241 -----RSELGWRLFGPFTIIIALMLSVALSEVSPRQGRYYRLIPSIFIFASLIVLMIAIK 295 Query: 324 YIIHKIEQNPYYIPILYLFLFCISSIF 350 I K E + + P+ L +++F Sbjct: 296 TRISKGELDIWAYPVALLVYAIAAALF 322 >gi|321222551|gb|EFX47623.1| putative permease [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] Length = 335 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 48/327 (14%), Positives = 114/327 (34%), Gaps = 22/327 (6%) Query: 33 LQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNT 92 ++ + N++L + G +P + ++ P + L + +E+ ++ Sbjct: 1 MRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHAC 60 Query: 93 GTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFR 152 G S+ L+K + LA+ I ++ P ++ A+A+ + L + F + Sbjct: 61 GLSKAVLVKAAMVLALFTGILAAVNVMWAGPWSSKHQDEVLAEAKANPGMAALAQGQFQQ 120 Query: 153 LDDDLYIKISKYNPNNTLQGIFIVDSRDTQT--HKIYYAQSGS---IDLDRQAIILNDGE 207 + + + + +F+ R + A SG + Q + LN G Sbjct: 121 ATNGNSVLFIESVDGSDFHDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNKGT 180 Query: 208 VHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLET 267 + + +D I F++Y + + ++ L N + + Sbjct: 181 RFEGTALLRDFRITDFQNYQAIIGHQAVALDPNDTDQMDMRTLWNTDND----------R 230 Query: 268 YRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH 327 R+E H R+T + L+ + RQ + +S+ + ++ F I Sbjct: 231 ARAELHWRITLVFTVFMMALMVVP--LSVVNPRQGR-----VLSMLPAMLLYLLFFLIQT 283 Query: 328 KIEQNPYYIPILYLFLFCISSIFLLMI 354 I+ N + + ++ L + Sbjct: 284 SIKSNGGKGKLDPVIWMWAVNLIYLAL 310 >gi|110596903|ref|ZP_01385193.1| permease YjgP/YjgQ [Chlorobium ferrooxidans DSM 13031] gi|110341590|gb|EAT60050.1| permease YjgP/YjgQ [Chlorobium ferrooxidans DSM 13031] Length = 359 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 61/346 (17%), Positives = 126/346 (36%), Gaps = 8/346 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI R ++F+ + VF+ +I +++ ++ + S+ ++ IP+ Sbjct: 1 MKILDRYIFRQFAKAFIFTSTTFVFLFILITMVEHLDDMMGRNLSIFQIIGYYLLSIPST 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + + V ++ ++EL I + G S L+ P L A ++ ++ Sbjct: 61 VLVTAPVSSLLASILVAGRLSASSELSAIRSAGVSMRQLLYPFLAGASFIAAVNLVNSCW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLD--DDLYIKISKYNPNNTLQG-IFIVD 177 I P S I + + L+ L EN L + + I + + + I + Sbjct: 121 IAPAAFSGIARFERE-HLSKEPGKLPENRNMHLIEQGNRIVSIGSMGSDESTGKAVSIEE 179 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 A S S + +L + + + S+ S + K L + Sbjct: 180 FSGAHLVSRIDAASMSYNPKSGEWMLENAAIRSFTGGSEQYSFIGRKPVKLSISPRSLLE 239 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 L+ ++ N+S L+ +F+ +L+ +I LI + A Sbjct: 240 FNLQPDEMNVSRHYRYLTEKRQAGISGLDRSAVKFYTKLSLPFASLIVMLIGV---PLSA 296 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 ++ I I+L F +F G + P L +L Sbjct: 297 KKKRGGLASEITIALFFGF-LFIGLQKTVAIAGYQGAMNPALAAWL 341 >gi|114797170|ref|YP_760296.1| putative permease [Hyphomonas neptunium ATCC 15444] gi|114737344|gb|ABI75469.1| putative permease [Hyphomonas neptunium ATCC 15444] Length = 391 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 50/362 (13%), Positives = 128/362 (35%), Gaps = 13/362 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y++R F + + + + ++++ +VS S + + LIP L Sbjct: 4 RLDRYLIRSFLGMFAGLTVLAMALLLLERLIRITEIVSGSGSAFASASLLVANLIPHYLN 63 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P F + + ++R+ E++ + G S ++ P + +++L+ + ++ Sbjct: 64 LALPGAFLISMILTIDRLSRSGEIVALMAAGVSLYRIVLPFVQFSLVLAAASLLISGFLQ 123 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P R + +++ Q S +E F + D+ I P L FI++S Sbjct: 124 PLSRYSYREIVYNLQHQSVLSVFQEQKFVQ-YDNRIIWTDSVLPGGRLGQTFILESEPDG 182 Query: 183 THKIYYAQSGSIDLDRQA-----IILNDGEVHRKSPISKDISIMKFKSYT--LQTESANS 235 + SG + R ++ G +R + ++ +++ + + E+ Sbjct: 183 ARTLLTGGSGKLREIRAGEWEITLLGGAGASYRDADPPEEYDRIEYGELSWPVIAETGQY 242 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV-AAD 294 + L LL + FH R ++ + LI+I+ + Sbjct: 243 RARGGDERELFLPELLA-KAGAAMPGDIAPAVAAATFHDRTSRAALLLAMPLIAIILGLN 301 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + R + I L + ++ E + + +++ + + Sbjct: 302 LGRVARSSGVVLGILFLLGVQ---KVLEYTLVQTSEGVIPPWMGFWPIVVVVAAASIFLF 358 Query: 355 KK 356 ++ Sbjct: 359 RR 360 >gi|163756953|ref|ZP_02164060.1| putative permease [Kordia algicida OT-1] gi|161323072|gb|EDP94414.1| putative permease [Kordia algicida OT-1] Length = 639 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 41/247 (16%), Positives = 92/247 (37%), Gaps = 20/247 (8%) Query: 20 CLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTS 79 C+FI+ W+ I ++ ++ K Y P ++P+V P + + Sbjct: 2 CIFILQTVWL-----FIGELAGKGLDAGVIFKFLLYTTPKLIPLVLPLSILVSSIMTFGR 56 Query: 80 MNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLA 139 + E + +TG S ++ ++ ++L + F N + P L Sbjct: 57 FAESYEFAAMKSTGISLQRAMRSLIIFIVILGVGTFFFSNSVIPWSEFKQYNLRKNLAKK 116 Query: 140 LTFSYLEENLFFRLDDDLYIKISKY--NPNNTLQGIFIVDSRDTQTHKIYY-AQSGSI-- 194 + E +F + ++ IK+ + + L + I + + ++I ++ G + Sbjct: 117 KPALAIGEGVFNDI-GNINIKVDNKYGDNDQLLDKVIIHQKSNDKKNRIVMKSKKGELKS 175 Query: 195 --DLDRQAIILNDGEVHRKSPISKDISI-------MKFKSYTLQTESANSSTIVLKANDQ 245 D D ++L DG + + S+ + F Y + + + + + L A D Sbjct: 176 SPDSDILQMVLFDGNRYEDVKSNDPKSVLRMQHAKVSFDKYIMNVDLRDINKVDLDATDY 235 Query: 246 NLSFLLN 252 N + N Sbjct: 236 NTYKMFN 242 >gi|315138812|dbj|BAJ45971.1| conserved inner membrane protein [Escherichia coli DH1] Length = 366 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 52/364 (14%), Positives = 132/364 (36%), Gaps = 25/364 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ +I ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + + + + + + +F+ R Sbjct: 122 PWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKG 181 Query: 183 T--HKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F+ Y + Sbjct: 182 NARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTAMLRDFRITDFQDYQAIIGHQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L N + + R+E + +T + L+ + Sbjct: 242 DPNDTDQMDMRTLWNTD----------TDRARAELNWCITLVFTVFMMALMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFLFCISSIFLLMI 354 RQ + +S+ + ++ F I ++ N P L+++ + + L ++ Sbjct: 290 NPRQGR-----VLSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIV 344 Query: 355 KKKY 358 + Sbjct: 345 LNLW 348 >gi|332284928|ref|YP_004416839.1| hypothetical protein PT7_1675 [Pusillimonas sp. T7-7] gi|330428881|gb|AEC20215.1| hypothetical protein PT7_1675 [Pusillimonas sp. T7-7] Length = 371 Score = 125 bits (315), Expect = 9e-27, Method: Composition-based stats. Identities = 43/253 (16%), Positives = 95/253 (37%), Gaps = 4/253 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ ++ I + ++ + + +++ + ++ T N++ ++ + T Sbjct: 1 MSLFKRSVVSEIMSHAGVVFSTLLVVWLSVLLVRLLGEAANGTIGANVVFGLATFSSITA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP++ + +T R +E+++ +G S I+PVL A+ ++I + + + Sbjct: 61 LPVILSVSLFIAVLTTVTRNFRESEMVVWFASGLSLKDWIRPVLRCAVPVAIIIAVLTLV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNTLQGIFIVDSR 179 P I + + + S + F +D + N G I Sbjct: 121 ASPWAYRQISEYRQRFEQRSDLSKVTAGQFIETEDGARVFFAEEPNEPGEEMGNVIARVV 180 Query: 180 DTQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + A+S I + ++L DG + P D +M+F SY + ES S Sbjct: 181 TPEWLSVVTAESARIQTEENGDRFLVLTDGHRYDLKPDMPDFRLMEFDSYGFRLESNASE 240 Query: 237 TIVLKANDQNLSF 249 + S Sbjct: 241 SSAEAVRRMAESQ 253 >gi|300312408|ref|YP_003776500.1| permease [Herbaspirillum seropedicae SmR1] gi|300075193|gb|ADJ64592.1| permease transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 376 Score = 125 bits (315), Expect = 9e-27, Method: Composition-based stats. Identities = 37/294 (12%), Positives = 102/294 (34%), Gaps = 14/294 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ + R + + + I + +++ + + + ++ + G+ +P Sbjct: 2 IFQRALRRELTSTAGGVFTTLFTITLTVMLIKILGQAAGGQVASQDVIALIGFQSLNYMP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + V+T +++E+++ G S I PVL + + + Sbjct: 62 IILILTGFISVLLVMTRSYQDSEIVVWFACGMSLTRWIAPVLRFGWPIVALVAALSFVAT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRL-DDDLYIKISKYNPN-NTLQGIFIVDSRD 180 P + ++ + + + F + + + + + ++ IF+ Sbjct: 122 PWANQQSSEYRSRFEQREDIARVSPGKFQESAAANRIFFVEGISGDASKVRNIFVNTIGA 181 Query: 181 TQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + A+ G +D +++N G + SP D I+ F+ Y L + + + Sbjct: 182 DGKNSVVVAKEGETVIDPDGEKFVVMNQGRRYDGSPGLPDFQIVDFERYGLLIGNQSQNA 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 A +++ L + R E R+ + L++I Sbjct: 242 ----AGERSARAL-----QMNELVAKNDGYARGELLWRIALPFMALTLMLLAIP 286 >gi|225024725|ref|ZP_03713917.1| hypothetical protein EIKCOROL_01611 [Eikenella corrodens ATCC 23834] gi|224942520|gb|EEG23729.1| hypothetical protein EIKCOROL_01611 [Eikenella corrodens ATCC 23834] Length = 370 Score = 125 bits (315), Expect = 9e-27, Method: Composition-based stats. Identities = 33/283 (11%), Positives = 102/283 (36%), Gaps = 14/283 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ ++ + ++ + + ++ +Q ++ + + + + + + + ++P Sbjct: 2 VYQRKFIKEVSQTAMGVFVLLLATLVAVQAVKLLGGAAGGKVAADAVATLVAFWTVALMP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V + VL+ R++E+ + ++G S I+P++ A+ ++ + ++ Sbjct: 62 IVLILTAYISALTVLSRYWRDSEMAVWLSSGLSLYGWIRPLMAFAVPFALLTALVSMLVM 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFR---LDDDLYIKISKYNPNNTLQGIFIVDSR 179 P + ++ + + S + +F +Y + +FI + Sbjct: 122 PWADARSREFAEVLKRRQDTSMVRPGVFQEFGGSTPRVYFVEKFDAGSGEAANLFIREQN 181 Query: 180 DTQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G +++ + L +G + +P D + F+ L +A Sbjct: 182 PQGRDTLITAERGRFAEADNKRTLELFNGRRYSGTPGMADYDEVSFERLHLVVGTAP--- 238 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWL 280 K +++ P R E R+T + Sbjct: 239 ---KLVQRDIHRRTVPTAK---LWGNTNPDLRGELMWRITMPV 275 >gi|307312964|ref|ZP_07592592.1| permease YjgP/YjgQ family protein [Escherichia coli W] gi|306907132|gb|EFN37639.1| permease YjgP/YjgQ family protein [Escherichia coli W] gi|315063568|gb|ADT77895.1| conserved inner membrane protein [Escherichia coli W] Length = 359 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 52/358 (14%), Positives = 131/358 (36%), Gaps = 25/358 (6%) Query: 9 LRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFC 68 +R +S L ++ I + ++++ + N++L + G +P + ++ P Sbjct: 1 MRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLS 60 Query: 69 FAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRST 128 + L + +E+ ++ G S+ L+K + LA+ +I ++ P Sbjct: 61 LFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAGPWSSRH 120 Query: 129 IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT--HKI 186 ++ A+A+ + L + F + + + + + + +F+ R + Sbjct: 121 QDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKGNARPSV 180 Query: 187 YYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 A SG + Q + LN G + + +D I F+ Y + + Sbjct: 181 VVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVALDPNDTD 240 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 ++ L N + + R+E + R+T + L+ + RQ + Sbjct: 241 QMDMRTLWNTD----------TDRARAELNWRITLVFTVFMMALMVVP--LSVVNPRQGR 288 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFLFCISSIFLLMIKKKY 358 +S+ + ++ F I ++ N P L+++ + + L ++ + Sbjct: 289 -----VLSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIVLNLW 341 >gi|308451108|ref|XP_003088547.1| hypothetical protein CRE_17759 [Caenorhabditis remanei] gi|308246904|gb|EFO90856.1| hypothetical protein CRE_17759 [Caenorhabditis remanei] Length = 341 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 54/334 (16%), Positives = 117/334 (35%), Gaps = 18/334 (5%) Query: 31 QILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIID 90 Q+++R + +ILL I G+ +P L ++ P F + V + + E+ +++ Sbjct: 5 QLIKRFGQAAMGRVDPSILLSIIGFRLPEFLTLILPLGFFIGLMLVFGRLYVDHEMAVLN 64 Query: 91 NTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLF 150 +G SRI + + ++ L ++ + + P +QL + + F + F Sbjct: 65 GSGISRIQVARLLIPLTVIYLCVQSVLMIWMSPWGIRQYEQLISTQAVRTGFDLVRPREF 124 Query: 151 FRLDDDLYIKISKYNPNNT-LQGIFIVDSRDTQT--HKIYYAQSGS----IDLDRQAIIL 203 I + + L+ IF + + + A+ + + + L Sbjct: 125 IS-SGAYTIYAGSLSEDRKNLKDIFFYQRAEKEGKPDVMILAKEATRIEIANETASVVDL 183 Query: 204 NDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPE 263 +G + P + S +F+SY L+ E+ + + L N N+P Sbjct: 184 VEGRRYEIYPGTPKYSQTEFQSYRLRLENNKEAKFESDEVEGLSFGKLLENRNDPVVA-- 241 Query: 264 LLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFS 323 SE RL ++ +++ A RQ + + L + + + Sbjct: 242 ------SELGWRLFVPFSIIVALMLA--TALCEVSPRQGRYLKLFPALLIFASLIVALMA 293 Query: 324 YIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + LF + L K+K Sbjct: 294 IRTRISKDEVGVWAYPAVLLFYAVAAALFSRKQK 327 >gi|281422565|ref|ZP_06253564.1| putative permease [Prevotella copri DSM 18205] gi|281403389|gb|EFB34069.1| putative permease [Prevotella copri DSM 18205] Length = 632 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 87/207 (42%), Gaps = 4/207 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K +++I + G F+ + F+ + + + I+ + +++++ + Y+ + Sbjct: 4 IKKLDIFIAKQFGLLFMGTFFICQFVLMMQFLWRYIDELIGKGLTMDVMAQFFWYMGLML 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P P + + ++ ++EL I G S + + ++ + I++ F +N Sbjct: 64 VPQALPLAILLSSLMTFGNLGESSELTAIKAAGISLMQAFRSLIVITIIIMFGSFYFQNN 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 + PK + QL + + E +F+ + + + K + L GI I Sbjct: 124 VGPKSNMKLAQLLISMKQKSPELEIPEGIFYDGIPNCNLYVQKKDLKTGKLYGIMIYRMT 183 Query: 180 DT-QTHKIYYAQSGSIDLD--RQAIIL 203 D+ + I A SG + ++ ++L Sbjct: 184 DSYEDAAIILADSGMLQSTAEKKHLVL 210 >gi|257452882|ref|ZP_05618181.1| hypothetical protein F3_07434 [Fusobacterium sp. 3_1_5R] Length = 361 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 59/370 (15%), Positives = 139/370 (37%), Gaps = 21/370 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK ++Y+ + + F S + I + Q+ + + V+ S + G L+P + Sbjct: 1 MKKLDIYMTKNFLKYFSYSLFSFLGIFVLSQVFKVLRYVNEGQLSPGQIPLFIGNLLPGI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + + M N E++ + +G L++ +F++ L+S+ +F + Sbjct: 61 IINVAPLAVLLGGLISINIMASNLEIISLKTSGIRFARLVRGPIFMSFLISLIVFYLNDR 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYL---EENLFFRLDDDLYIKISKY--NPNNTLQGIFI 175 + P ++L + + + + +EN FFR + Y+ K + + + Sbjct: 121 VYPGSVVRNREL--RGKEDVEEREVPKEKENAFFRNVEGRYVYYMKKINRETGIMDHVEV 178 Query: 176 VDSRDT--QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDIS-IMKFKSYTLQTES 232 +D + + ++ A+ G D R+ + D ++ + + ++ + Y + Sbjct: 179 LDMSENFDKIERMITAKKGRYDFKRKLWVFEDAHIYYPDTDTVEARAFIQEQKY-MDEPE 237 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 S + Q ++ L E+ E SE KR + + + + Sbjct: 238 YFISLSNIVPKQQTIAELKKAIKEGSATGNEIREIL-SELGKRYSFPFASFVVSFLGLAL 296 Query: 293 ADKRALVRQRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLF---LFCISS 348 + + + I +SI G ++ + N Y P L + L +++ Sbjct: 297 G-----SHYVRGMSILNIVISILLGYAYYLVEGAFEALGMNGYLNPFLSGWIPNLLFLAA 351 Query: 349 IFLLMIKKKY 358 M + +Y Sbjct: 352 GLYFMRRAEY 361 >gi|269467941|gb|EEZ79676.1| permease [uncultured SUP05 cluster bacterium] Length = 373 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 53/365 (14%), Positives = 127/365 (34%), Gaps = 29/365 (7%) Query: 9 LRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFC 68 +R + + I + + Q++ IN ++ LL + + + +P++ Sbjct: 1 MRNVLVMLSAVFIIIGLVVFGNQLVLVINQSLKEGIPVSDLLPLISFKMIRDVPLILSLS 60 Query: 69 FAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRST 128 + ++ + +++E +++++ G + + + I + IF+ P + Sbjct: 61 LFLAIILSVSRLYKDSEAIVMNSLGLGDKQFMLFIQPIVIAIFIFILFLTTYAVPWSKHQ 120 Query: 129 IKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNN-----TLQGIFIVDSRDTQ 182 + + + A FS+++E F D + SK ++ IFI + Sbjct: 121 RNMVMDRTENASEFSFIKEGEFQEFKDGDVVFYASKVKAGGELGQQEMEEIFIYTLSN-D 179 Query: 183 THKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQT---ESANS 235 I A+ + D + L DG + P + I+ F Y L+ + + Sbjct: 180 ESIITLAKQANKYTDGITKSVYLRLKDGTRYHGFPGDTNKKILNFDLYDLKIIDGDKEKT 239 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 ++K Q+ L + SE RL+Q P+ ++SI+ Sbjct: 240 KDTIVKVEGQDTFDLFRSD----------GLKEVSELQWRLSQ---PISVLILSILGILL 286 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY--YIPILYLFLFCISSIFLLM 353 + K + + + +EQ + + ++ L + IF+ Sbjct: 287 GKSSPRGGKNLGVLFGVVVFILYNNALLVAKSNLEQGSVHPIVGLWWVHLLMVLIIFIFY 346 Query: 354 IKKKY 358 + + Sbjct: 347 LYRHR 351 >gi|157413956|ref|YP_001484822.1| putative permease [Prochlorococcus marinus str. MIT 9215] gi|157388531|gb|ABV51236.1| Permease [Prochlorococcus marinus str. MIT 9215] Length = 403 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 61/376 (16%), Positives = 134/376 (35%), Gaps = 23/376 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + ++L I + + I+ V + I V L + LK+ + +P+ L Sbjct: 27 LLDRWLLGQIIPPMIFAISAFTVISLSVGVMFDLIRKVVEYGLPLFLALKVLFFSLPSFL 86 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + T ++ N+ELL + + G +I P + L+I ++ F + + Sbjct: 87 VLSFPMAVLLSTLLAYGKLSSNSELLALKSLGIKTSRIIAPAIALSIFMTGLTFYFNDNL 146 Query: 122 EPKCRSTIKQ-LSAKAQLALTFSYLEENL-FFRLDDDL---------------YIKISKY 164 PK + L A + + +EN+ F R + +I +++ Sbjct: 147 VPKSNKLAEATLRAGIGSSFSEEEGKENIMFSRYGSRINASTKKPTKNYSQLTHIFYAQW 206 Query: 165 NPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK 224 N + + ++D +I A S D + I + G + +P + +I +FK Sbjct: 207 YKNKLMGNVTLLDFSREDLQQILKADSARFDKKNSSWIFSKGSIVSITPSGQTTNI-QFK 265 Query: 225 SYTLQTESAN--SSTIVLKANDQNLSFLLNPNPNNPNYRP-ELLETYRSEFHKRLTQWLF 281 YT + + AN+ L + + + + ++ T Sbjct: 266 EYTYPFVEGPMELAKVPKDANEMTLKQAIQAEKIYKKTGNIKEVRRIKVRIQEKFTLPFA 325 Query: 282 PVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL 341 ++FGLI + ++ +R K + I F + ++ I +L Sbjct: 326 CLVFGLIG-SSLGSKSNLRSSKSQGFGLSVILILIYYVMSFIFSSLGVKGLLPPIFAAWL 384 Query: 342 FLFCISSIFLLMIKKK 357 + + +++K Sbjct: 385 PVLISLGGGIYLLRKS 400 >gi|291614865|ref|YP_003525022.1| permease YjgP/YjgQ family protein [Sideroxydans lithotrophicus ES-1] gi|291584977|gb|ADE12635.1| permease YjgP/YjgQ family protein [Sideroxydans lithotrophicus ES-1] Length = 377 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 44/278 (15%), Positives = 106/278 (38%), Gaps = 18/278 (6%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 ++R + L+ ++ I Q+++ + S +++ +L + G+ LP++ Sbjct: 25 LVREFASTGLLVSSILLGIVVFTQLIRLLGESVSGMLAVDGVLAMLGFTSLNYLPVLLSI 84 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 + L+ R++E+++ +G I+PVL AI +++ + + ++ P S Sbjct: 85 SLFLSVLLTLSRSYRDSEMVVWFTSGIGLTRWIRPVLGYAIPVTLLIALLSLVLSPWALS 144 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRL--DDDLYIKISKYNPNNTLQGIFIVDSRDTQTHK 185 + + S +F D ++ + + IF+ +++ + Sbjct: 145 KADEFKRRLDSRDDVSAATPGVFRESKQADRVFFLEDVDSQKKRVGNIFVQSTQNGKEG- 203 Query: 186 IYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 A+ G + +++ +G + P D I++F+ Y ++ E A + Sbjct: 204 TMVAKEGYQETAPNGDRFLVMLNGTRYEGIPGRADFRIVEFERYAMRIEPAELREDLPHL 263 Query: 243 NDQNLSFLL-NPNPNNPNYRPELLETYRSEFHKRLTQW 279 + +LL NP N SE R+ Sbjct: 264 QAFSTLYLLQNPTAWNL-----------SELEWRIGLP 290 >gi|218246939|ref|YP_002372310.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 8801] gi|257060003|ref|YP_003137891.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 8802] gi|218167417|gb|ACK66154.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 8801] gi|256590169|gb|ACV01056.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 8802] Length = 393 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 57/363 (15%), Positives = 125/363 (34%), Gaps = 29/363 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPT 59 + + Y+ I F + + + + V+ S + + LKI +P Sbjct: 18 LSIMDRYLFIEILLPFFFGMGIFTSLGVAIGTLFDLVRRVTESGLLITVALKILVLKMPG 77 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + + P + + ++ ++EL+ + + G S L+ P + ++L++ FI + Sbjct: 78 FIVLAFPMAMLLAALMAYSRLSSDSELIAMRSLGISIYRLVIPAILFSLLVTGLAFIVND 137 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLE-------ENLFFRLDDD-------LYIKISKYN 165 I P KA S+ E E + +D +N Sbjct: 138 WIAPAATHEAAVTLEKAVSKERPSFAEQRNIIYPEYRIIQQEDGKETTVLSRLFYAENFN 197 Query: 166 PNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKS 225 ++ + I+D ++I +QS + ++ + +G ++ +P +I++F+ Sbjct: 198 -GEEMEELTILDRSQEDVNQIVTSQSATWNVAQNTWDFFNGTIYIIAPDGSYRNIVRFQH 256 Query: 226 YTLQTESANSSTIVLKAN------DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQW 279 L+ A + N Q +L + R +E E + Sbjct: 257 QQLKLPRAPLDLANRRQNFTEMSIAQTKEYLEVMKLSGNKERVRKVEVRIQE---KYALP 313 Query: 280 LFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL 339 ++FGL+ A R R I + L S ++ S++ + P L Sbjct: 314 FVCLVFGLVG-AAMGVRPQNTSRATSFGICVGLIFS---YYLLSFVTSSLGIWGILTPFL 369 Query: 340 YLF 342 + Sbjct: 370 AAW 372 >gi|189220202|ref|YP_001940842.1| permease [Methylacidiphilum infernorum V4] gi|189187060|gb|ACD84245.1| Predicted permease [Methylacidiphilum infernorum V4] Length = 405 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 64/371 (17%), Positives = 133/371 (35%), Gaps = 18/371 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQ-RINLVSSSTESLNILLKISGYLIPT 59 M++ ++ + ++ L++ + F + + +L+ ++ L I +K+ LIP Sbjct: 34 MRTIYKFLFLELFKNSLITTSILTFFLVIANAFRDLSDLLVNNEVPLWISVKLLVSLIPF 93 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 VL P+ + + M+++ EL + + G S ++ PV++ A+L S+ F Sbjct: 94 VLTFTLPWGLLVAVILLFGKMSQDRELTALKSAGISLGAIMAPVIWFALLYSVLSFAINA 153 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 I PK R K++ + L S+ + N D + + L+ ++I ++ Sbjct: 154 YIGPKSRHAFKEIFSDVMLHNPLSFFKSNKTIDQFDGFRLYATNRI-GARLEDVYIWETD 212 Query: 180 DTQTH-KIYYAQSGSIDLD--RQAIILNDGEVHRKSPISKDISIMKFK---------SYT 227 + A I+ D Q I+L ++ D +K Y Sbjct: 213 ADLRPLRSIRASEAEIEPDLAHQRILLTLWNARQEERNVSDPQNVKLVMPGSRATQLPYE 272 Query: 228 LQTESANSSTIVLKANDQNLSFLLNPN--PNNPNYRPELLETYRSEFHKRLTQWLFPVIF 285 + V K+ + + + + +EF KRL L F Sbjct: 273 ISLAQLFDRLTVRKSIGLSTLDEIGRSIVAADLFGFTSNPTPVLTEFQKRLAFSLSCFTF 332 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC 345 L+ A + + R+ I L + K + N + I++L Sbjct: 333 VLVGAPLAIQ--VQRKETSIGVALSLLIVLSYYVIVLLAEALKAKTNLFPELIIWLPNII 390 Query: 346 ISSIFLLMIKK 356 S+ +I + Sbjct: 391 FQSLGFWLIWR 401 >gi|237740743|ref|ZP_04571224.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31] gi|229422760|gb|EEO37807.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31] Length = 359 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 60/344 (17%), Positives = 119/344 (34%), Gaps = 9/344 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YIL + +++ FI + ++ + + S+ +L++ + IP + Sbjct: 1 MKIINKYILDELKGPIILAVFVFTFIFLLDIVVTMMEHIIVKGISVFDVLRLLSFYIPPI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + T +RN+E + + +TG S ++KP+L +AI +IF+ + Sbjct: 61 LTQTIPIGMFLGIMICFTKFSRNSESVAMVSTGMSIRAILKPILAIAIGAAIFIVFLQES 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD--S 178 I P+ +K + K L+E F D I + K + + I + Sbjct: 121 IIPRSFIKLKYVGTKIAYENPVFQLKEKTFIDNLDQYSIYVDKVESDGKAKNIIAFEKPQ 180 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 T+ + + + +I+L + K F + + + Sbjct: 181 DKTKFPMVLTGEEAFWKDN--SIVLKQSQFISFDENGKKNLTGTFDEKRVVL-TPYFENL 237 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 LK D + + N E + Y+ E ++L V +I +L Sbjct: 238 NLKIKDVEALSITDLIKNIRKVDAEEVLKYKIEIFRKLALIFSTVPLAVIGFCL----SL 293 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 R F+ I + F I + P + + Sbjct: 294 GHHRISKKYSFVLAMIIIFAYIIFLNIGIVMASAGKLHPFIATW 337 >gi|29347827|ref|NP_811330.1| hypothetical protein BT_2417 [Bacteroides thetaiotaomicron VPI-5482] gi|29339729|gb|AAO77524.1| putative permease [Bacteroides thetaiotaomicron VPI-5482] Length = 616 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 42/257 (16%), Positives = 101/257 (39%), Gaps = 22/257 (8%) Query: 14 RSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMET 73 F+ + +FI + + + ++ + ++++ + Y T++P+ P + + Sbjct: 1 MLFIGTFFICLFIFMMQFLWRYVDELVGKGLDMSVIAQFFFYSALTLVPISLPLAILLAS 60 Query: 74 TNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLS 133 + ELL + G S + +++P+ F L F +N++ P ++ + L Sbjct: 61 LITFGNFGERYELLAMKAAGISLLKIMRPLAFFVCGLVAVSFYFQNVVGPIAQTKLYTLI 120 Query: 134 AKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSRDT-QTHKIYYAQS 191 + + E +F+ D +KI+K N + + I + +D + I YA S Sbjct: 121 ISMKQKSPELDIPEGVFYSEIPDYNLKIAKKNRKTGMMYDVLIYNLKDGFENAHIIYADS 180 Query: 192 GSIDLDRQA----IILNDGEV---------------HRKSPISKDISIMKFKSYTLQTES 232 G +++ + L G++ +R+ + +I++F S Sbjct: 181 GRMEMTADKQHLWLHLYSGDLFENLRSQSMKSQNVPYRREEFREKHTIIEFDS-DFNMAD 239 Query: 233 ANSSTIVLKANDQNLSF 249 A+ + A D ++ Sbjct: 240 ASIMSNTSAAKDMSMLQ 256 >gi|317059424|ref|ZP_07923909.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R] gi|313685100|gb|EFS21935.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R] Length = 362 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 59/370 (15%), Positives = 139/370 (37%), Gaps = 21/370 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK ++Y+ + + F S + I + Q+ + + V+ S + G L+P + Sbjct: 2 MKKLDIYMTKNFLKYFSYSLFSFLGIFVLSQVFKVLRYVNEGQLSPGQIPLFIGNLLPGI 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + + M N E++ + +G L++ +F++ L+S+ +F + Sbjct: 62 IINVAPLAVLLGGLISINIMASNLEIISLKTSGIRFARLVRGPIFMSFLISLIVFYLNDR 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYL---EENLFFRLDDDLYIKISKY--NPNNTLQGIFI 175 + P ++L + + + + +EN FFR + Y+ K + + + Sbjct: 122 VYPGSVVRNREL--RGKEDVEEREVPKEKENAFFRNVEGRYVYYMKKINRETGIMDHVEV 179 Query: 176 VDSRDT--QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDIS-IMKFKSYTLQTES 232 +D + + ++ A+ G D R+ + D ++ + + ++ + Y + Sbjct: 180 LDMSENFDKIERMITAKKGRYDFKRKLWVFEDAHIYYPDTDTVEARAFIQEQKY-MDEPE 238 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 S + Q ++ L E+ E SE KR + + + + Sbjct: 239 YFISLSNIVPKQQTIAELKKAIKEGSATGNEIREIL-SELGKRYSFPFASFVVSFLGLAL 297 Query: 293 ADKRALVRQRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLF---LFCISS 348 + + + I +SI G ++ + N Y P L + L +++ Sbjct: 298 G-----SHYVRGMSILNIVISILLGYAYYLVEGAFEALGMNGYLNPFLSGWIPNLLFLAA 352 Query: 349 IFLLMIKKKY 358 M + +Y Sbjct: 353 GLYFMRRAEY 362 >gi|326316899|ref|YP_004234571.1| permease YjgP/YjgQ family protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373735|gb|ADX46004.1| permease YjgP/YjgQ family protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 365 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 50/322 (15%), Positives = 123/322 (38%), Gaps = 16/322 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ I + + RSF + + +V + + +++ + S + + + ++ + G+ + LP Sbjct: 2 LFDSSIRKELARSFGATLVVLVTVVMTMMLIRTLGQASRGSVNPSDVMLVMGFTVLGQLP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + + L M R +E++I +G + L+ P+L A + + + +I Sbjct: 62 TILTLSLFVAVVGALARMYRESEMVIWFASGRGMLHLLPPLLRFAWPVILAIATLALLIW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNN-TLQGIFIVDSRD 180 P I++L + + + F + I + P+N +FI S + Sbjct: 122 PWANQQIQELKVQYEQRSDVDRIAPGEFQESANGARVFFIDRETPDNQQATNVFIA-SSE 180 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + A+S ++ +L+DG+ + + + +F Y + A SS+ Sbjct: 181 HGRETVTSARSARLETQGSQRMALLSDGQRLETTLDKPGLKVSEFTEYGTRVGGAASSSS 240 Query: 239 VLKA-NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 A ++ + L ++P +R+E R L + F ++ + A Sbjct: 241 DDAAVKTRSTAQLFA--SSDP--------VFRAELGWRFGLALAALNFVVLGLAVASANP 290 Query: 298 LVRQRKKIHPIFISLSISFGVF 319 + + + + + + Sbjct: 291 RAARSTSLVFALFAFVVYYNLM 312 >gi|110807999|ref|YP_691519.1| hypothetical protein SFV_4232 [Shigella flexneri 5 str. 8401] gi|110617547|gb|ABF06214.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401] Length = 345 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 49/344 (14%), Positives = 126/344 (36%), Gaps = 25/344 (7%) Query: 23 IVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNR 82 ++ I + ++++ + N++L + G +P + ++ P + L + Sbjct: 1 MLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYT 60 Query: 83 NTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTF 142 +E+ ++ G S+ L+K + LA+ +I ++ P ++ A+A+ Sbjct: 61 ESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGM 120 Query: 143 SYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT--HKIYYAQSGS---IDLD 197 + L + F + + + + + + +F+ R + A SG + Sbjct: 121 AALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDG 180 Query: 198 RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNN 257 Q + LN G + + +D I F+ Y + + ++ L N + Sbjct: 181 SQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVALDPNDTDQMDMRTLWNTD--- 237 Query: 258 PNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFG 317 + R+E + R+T + L+ + RQ + +S+ + Sbjct: 238 -------TDRARAELNWRITLVFTVFMMALMVVP--LSVVNPRQGR-----VLSMLPAML 283 Query: 318 VFWGFSYIIHKIEQNPY---YIPILYLFLFCISSIFLLMIKKKY 358 ++ F I ++ N P L+++ + + L ++ + Sbjct: 284 LYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIVLNLW 327 >gi|218264803|ref|ZP_03478497.1| hypothetical protein PRABACTJOHN_04207 [Parabacteroides johnsonii DSM 18315] gi|218221776|gb|EEC94426.1| hypothetical protein PRABACTJOHN_04207 [Parabacteroides johnsonii DSM 18315] Length = 655 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 37/216 (17%), Positives = 85/216 (39%), Gaps = 6/216 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K ++L+ FLM+ +FI + + + I+ + + +L ++ Y + Sbjct: 4 IKRLYTFMLQTFLPLFLMTFGICLFIVLMQFLWRYIDDMVGKGLGIPVLAEMFMYAALFL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +PM P + + ++ ELL + + G S + +++P++ ++SI F +N Sbjct: 64 VPMALPLAILLASLMTFGNLGERLELLAMKSAGVSLVHIMRPLIITISMISIGAFFFQNY 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 P + + L + + E +F+ + + + L+ + I D Sbjct: 124 AMPVVQVKLYTLLWSMRQKSPELDIPEGVFYSEITGFNVYVKHKDTETGLLRDMMIYDYS 183 Query: 180 DT-QTHKIYYAQSGSIDLDRQ----AIILNDGEVHR 210 + + A SG + + L +GE R Sbjct: 184 EGFNKVSVMVADSGRLKTSADKMFLVLSLFNGESFR 219 Score = 37.2 bits (85), Expect = 3.7, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 61/155 (39%), Gaps = 16/155 (10%) Query: 210 RKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLN------PNPNNPNYRPE 263 +K + +M F S Q E+ +L ++ + + YR Sbjct: 332 EIQKTNKPVIVMNFDSL-YQAENPGKKATILTRAKSSIENMKADYFFKAATIGDEAYR-- 388 Query: 264 LLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFS 323 + + +E+HK+ T ++F I A A++R+ P+ IS+ I F ++ Sbjct: 389 -VRRHLTEWHKKFTLSFACMVFFFIG---APLGAIIRKGGLGMPVVISV-ILFIFYYIID 443 Query: 324 YIIHKIEQNPYY--IPILYLFLFCISSIFLLMIKK 356 I K+ ++ + ++L ++ + + + K Sbjct: 444 NIGFKMARDGVWEAWQGMWLSSAILAPLGIFLTYK 478 >gi|300778309|ref|ZP_07088167.1| permease YjgP/YjgQ family protein [Chryseobacterium gleum ATCC 35910] gi|300503819|gb|EFK34959.1| permease YjgP/YjgQ family protein [Chryseobacterium gleum ATCC 35910] Length = 485 Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 74/215 (34%), Gaps = 7/215 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K + YI++ F + FI V I ++ S +LK+ YL V Sbjct: 2 LKILDRYIIKTFFGPFFFIFSVLFFIFIVNIIWVQLGQFMGKGLSYWQILKLLFYLGVNV 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + MV P + + EL + G ++ P+L ++ L+I LF N Sbjct: 62 ISMVLPLTILLASIMSFGEFGERYELAAMKAAGIPLTRVMTPLLGISTALAIMLFFFSNN 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN--TLQGIFIVDS 178 I P + K + F +K K N ++G+F+ Sbjct: 122 IIPDFQKKAKNMLFNIAQTKPAINFTPGQFIDQIPGYMVKFDKIYGENGENIEGVFVHKK 181 Query: 179 RDT-QTHKIYYAQSGSIDLDRQ----AIILNDGEV 208 + + + A+ G ++L +G V Sbjct: 182 ANAYENQQSVVAEKGKFVPAANKNYLKLVLYNGYV 216 >gi|89891367|ref|ZP_01202873.1| permease YjgP/YjgQ [Flavobacteria bacterium BBFL7] gi|89516398|gb|EAS19059.1| permease YjgP/YjgQ [Flavobacteria bacterium BBFL7] Length = 481 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 96/259 (37%), Gaps = 16/259 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL ++FL + I+FI + I I ++ + + K Y IP + Sbjct: 1 MKILDRYILTSFIKTFLSVFIVIMFILILQAIWLYIKDLAGKDLDMITIAKFMMYTIPVI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+ P + + V +M N E + + G S ++ ++ + L + F N Sbjct: 61 VPLALPLSIILASIMVFGNMAENYEFAAMKSNGISLQRAMRSLMIVVGTLGVTSFFFANT 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT--LQGIFIVDS 178 + P L + + F +L D + IK+ + + L + I Sbjct: 121 VIPWGHFKQGNLRRNIVNSKPAMAIGVGNFNQLGD-INIKVDQKTGDRGQYLDNVLIHKK 179 Query: 179 --RDTQTHKIYYAQSG----SIDLDRQAIILNDGEVHR-------KSPISKDISIMKFKS 225 + + + ++ G S+ + ++L DG + + S F + Sbjct: 180 NPKRNGNYTVIKSKKGELKSSLKSNIIQLVLTDGNYYDDLFPENAQKRRSSPFVRSYFDT 239 Query: 226 YTLQTESANSSTIVLKAND 244 YTL + + + L D Sbjct: 240 YTLNVDVSGLNNTDLNKAD 258 >gi|73542369|ref|YP_296889.1| permease YjgP/YjgQ [Ralstonia eutropha JMP134] gi|72119782|gb|AAZ62045.1| permease YjgP/YjgQ [Ralstonia eutropha JMP134] Length = 373 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 53/368 (14%), Positives = 132/368 (35%), Gaps = 27/368 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ + R + + L ++ +++ + L ++ S N +L + G L Sbjct: 2 IFQQALRRELAYTAGAVFLVMLTFMLTSLVIRILGLAANGKASPNDVLILIGLATIGYLS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT +++E+++ + G S L+KPVL A + + Sbjct: 62 ILLSATLFISTLIVLTRWYKDSEMVVWFSAGISLRDLVKPVLQFAAPFILLSLLLGLFAW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYNPN-NTLQGIFIVDSRD 180 P + + S + F + Y+ I + N + +F+ ++ Sbjct: 122 PWANQQSTLFRDRFEQRGVLSMIAAGRFIEPSNGNYVLFIEGIDGNMKYARNVFVANAEA 181 Query: 181 TQTHKIYYAQS--GSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + QS ++ + +++ +G + +P D I++F+ Y ++ ++ + Sbjct: 182 NKIGVALAHQSTFETMPNGDRMVVMENGRRYAGTPGQIDYRIVEFERYAVKVDNKPPESA 241 Query: 239 VLK-ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ LL + E R++ + F +I+I A Sbjct: 242 NEQPPKSRDTFDLL----------RKPTLENLGELLWRISLPILAFNFVMIAIPLA--YV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-----NPYYIPILYLFLFCISSIFLL 352 R + +F L ++ +S +I+ + + + + LL Sbjct: 290 NPRLGRYTPLVFAVL-----IYLTYSNLINLAQSWVRSGSIPFWLAWWPIHAVAFLAALL 344 Query: 353 MIKKKYTK 360 M + + + Sbjct: 345 MFRYRQNR 352 >gi|257466753|ref|ZP_05631064.1| hypothetical protein FgonA2_04885 [Fusobacterium gonidiaformans ATCC 25563] Length = 361 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 58/370 (15%), Positives = 139/370 (37%), Gaps = 21/370 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK ++Y+ + + F S + I + Q+ + + V+ S + G L+P + Sbjct: 1 MKKLDIYMTKNFLKYFSYSLFSFLGIFVLSQVFKVLRYVNEGQLSPGQIPLFIGNLLPGI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + + M N E++ + +G L++ +F++ L+S+ +F + Sbjct: 61 IINVAPLAVLLGGLISINIMASNLEIISLKTSGIRFARLVRGPIFMSFLISLIVFYLNDR 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYL---EENLFFRLDDDLYIKISKY--NPNNTLQGIFI 175 + P ++L + + + + +EN FFR + Y+ K + + + Sbjct: 121 VYPGSVVRNREL--RGKEDVEEREVPKEKENAFFRNVEGRYVYYMKKINRETGIMDHVEV 178 Query: 176 VDSRDT--QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDIS-IMKFKSYTLQTES 232 +D + + ++ A+ G D R+ + D ++ + + ++ + Y + Sbjct: 179 LDMSENFDKIERMITAKKGRYDFKRKLWVFEDAHIYYPDTDTVEARAFIQEQKY-MDEPE 237 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 S + + ++ L E+ E SE KR + + + + Sbjct: 238 YFISLSNIIPKQKTIAELKKAIKEGSATGNEIREIL-SELGKRYSFPFASFVVSFLGLAL 296 Query: 293 ADKRALVRQRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLF---LFCISS 348 + + + I +SI G ++ + N Y P L + L +++ Sbjct: 297 G-----SHYVRGMSILNIVISILLGYAYYLVEGAFEALGMNGYLNPFLSGWIPNLLFLAA 351 Query: 349 IFLLMIKKKY 358 M + +Y Sbjct: 352 GLYFMRRAEY 361 >gi|193215417|ref|YP_001996616.1| permease YjgP/YjgQ family protein [Chloroherpeton thalassium ATCC 35110] gi|193088894|gb|ACF14169.1| permease YjgP/YjgQ family protein [Chloroherpeton thalassium ATCC 35110] Length = 360 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 56/366 (15%), Positives = 125/366 (34%), Gaps = 15/366 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI R + + L V + ++ ++++++ L ++ + Y P + Sbjct: 1 MKILDRYIFREYFSTLGFAILAFVSLFILVDLIEKVDDFLDKNVELKLIAQYYLYFTPEI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + + V + + TEL + G S L+ P + ++ F Sbjct: 61 IKLIVPISTLLASLFVTGKLAKQTELTAMKAGGISLYRLLLPFFLVGAIIGGIDFYLSGW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLD----DDLYIKISKYNPN-NTLQGIFI 175 + P+ +Q A L + + + F ++ + ++I +N + T Q + + Sbjct: 121 VVPETTKFKEQFDATY---LGKTKWKSSSFSNIELLENPNRIVRIGYFNKDTRTCQNVSL 177 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISI-MKFKSYTLQTESAN 234 + + + A + D I + S K + L + Sbjct: 178 QNYQKSHMLWRIDAAKMTYDTSLSRWIFYQAYYRDFQSGKEQFSYAAKIDTVQLVFSAKE 237 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + +L ++ ++H +++ + +I LI + Sbjct: 238 LEENNAALDQMSLDEHWKYIEARRRAGFSNVDEALVKYHIKISFPIACLIVILIGV---P 294 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 A ++ ISL I F FS + +K +P + FLF + Sbjct: 295 LSAEKKRSGIALEAGISLLIGFLYIILQKTFSTLGYKGAVDPILSAWIPNFLFLTVGLVF 354 Query: 352 LMIKKK 357 L KK Sbjct: 355 LFKAKK 360 >gi|158521443|ref|YP_001529313.1| permease YjgP/YjgQ family protein [Desulfococcus oleovorans Hxd3] gi|158510269|gb|ABW67236.1| permease YjgP/YjgQ family protein [Desulfococcus oleovorans Hxd3] Length = 359 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 54/365 (14%), Positives = 132/365 (36%), Gaps = 14/365 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+ I ++ + ++ I + ++I+ + L+ + + IP + Sbjct: 1 MTILSRYIIAEILKALAVVMAVVIVIYVAVDFFEKIDDFLGAGVPLSRMAVFFLFKIPLI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + V MNR E+ + ++G +L KP + + + L I I Sbjct: 61 VVQTAPVGVLIASLVVFGLMNRRNEVTALKSSGIGPASLFKPAAVVGVGCCVLLLIVSEI 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSR 179 + P+ S + + T S ++N + DD + I Y P + + D Sbjct: 121 VVPRTISRANYIWLQQVRQKTSSVDQKNNIWLKDDRTIVHIRHYQPREKKAFDVVLHDL- 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKS---YTLQTESANSS 236 D + D L + + ++ ++ ++ +++F+ L + Sbjct: 180 DEGFRVTRRIDAARGLYDGGQWTLRN-VLDQQFDVAGNVQLVEFRERLKIELDLLPEDLD 238 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 A++ LL+ + + ++R + H +L+ ++ GLI Sbjct: 239 RAAESADEMGFVQLLDR-IRQVERQGYSVVSHRVDLHAKLSFPFVCLLMGLIGAALGIMG 297 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF----LFCISSIFLL 352 + + SF V+W F + P++ + +F ++ ++ Sbjct: 298 RT--RGGITANAAYGVGASF-VYWIFHSFCISLGYGGMLPPLIAAWSANLVFGGATAAVI 354 Query: 353 MIKKK 357 ++ ++ Sbjct: 355 LVARR 359 >gi|116070679|ref|ZP_01467948.1| possible permease [Synechococcus sp. BL107] gi|116066084|gb|EAU71841.1| possible permease [Synechococcus sp. BL107] Length = 384 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 54/364 (14%), Positives = 130/364 (35%), Gaps = 22/364 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + ++L I L + + I ++ + + + L++ IP+ L Sbjct: 14 LLDQWLLAEIAAPLLFAIASFTVLGLSIGVMFELARRLVDGLPILVALQLLLLNIPSFLV 73 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P T + ++ N+EL + + G S L+ P L L+I L+ F+ ++I Sbjct: 74 LSLPMATLFATLLAYSKLSSNSELTALRSLGVSTTRLVVPALALSIFLTGLTFVFNDVIV 133 Query: 123 PKCRSTIKQLSAKAQLALTFS----YLEENLFFRLDDDLY----------IKISKYNPNN 168 P+ + + K + + N F ++ D ++ Sbjct: 134 PRANTQAEITLQKGLGRALATEKGKDITFNSFGKIYDPKTETSSRGLRQLFYARRFEQ-G 192 Query: 169 TLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKS--Y 226 + + ++D +++ A+ + + +G+V +P + + + F Y Sbjct: 193 EMLDVTLLDFSRADYRQMWIAERAVYNEAKAMWEFFNGQVLTLNP-NGSTTRLAFDENFY 251 Query: 227 TLQTESANSSTIVLKANDQNLSFLLNPNP-NNPNYRPELLETYRSEFHKRLTQWLFPVIF 285 L + + + AND LS ++ + + R ++ + + ++F Sbjct: 252 PLSSGPLQVAKLPDDANDMTLSQAISAEKIESDAGNIKAARKLRVRIQEKFSFPMACIVF 311 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC 345 GLI + R R + +S+ + G ++ S + + P +L Sbjct: 312 GLIG-SSLGARPGSRTSRS-QGFGVSILLILG-YYALSVSFSSLGVSGILPPFFAAWLPV 368 Query: 346 ISSI 349 + S+ Sbjct: 369 LISL 372 >gi|194337384|ref|YP_002019178.1| permease YjgP/YjgQ family protein [Pelodictyon phaeoclathratiforme BU-1] gi|194309861|gb|ACF44561.1| permease YjgP/YjgQ family protein [Pelodictyon phaeoclathratiforme BU-1] Length = 359 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 59/346 (17%), Positives = 123/346 (35%), Gaps = 8/346 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YIL ++FL + + + +I ++++++ L ++ IP++ Sbjct: 1 MKILNKYILGQFAKAFLFTSIAFACLFILINMVEKLDEFIDKKLGLWQIVHYYLLSIPSI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L +V+P + + V ++ + EL I + G S L+ P + +L+ +F ++ Sbjct: 61 LLVVSPVSALLSSILVAGKLSFSGELPAIRSAGVSMRQLLTPFITGGVLILLFNLLNAGW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRL--DDDLYIKISKYNPNN-TLQGIFIVD 177 I P + + +EN + + + I +P+ + + I + Sbjct: 121 ISPSTFAEKNHFEQRYLKRNPAQP-QENRNIHILEPGNRMLSIGTLDPDQAEISAVSIEE 179 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A S + IL + + + + S L + S Sbjct: 180 FSGARLKSRTDADSMRYNQKTGEWILLNAAKRSFTGKDETFHLTPVTSVKLALSPRSLSE 239 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L+ ++ NL LE +FH ++ +I LI + A Sbjct: 240 LNLQPDEMNLIRHYRYLTEKEGAGFAGLERSTVKFHNKIALPFASLIIILIGV---PLSA 296 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 ++ I I+L F +F G I P+L +L Sbjct: 297 KKKRGGLASEISITLFAGF-LFMGVQKTIAIAGYQGMINPMLAAWL 341 >gi|315917902|ref|ZP_07914142.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC 25563] gi|313691777|gb|EFS28612.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC 25563] Length = 362 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 58/370 (15%), Positives = 139/370 (37%), Gaps = 21/370 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK ++Y+ + + F S + I + Q+ + + V+ S + G L+P + Sbjct: 2 MKKLDIYMTKNFLKYFSYSLFSFLGIFVLSQVFKVLRYVNEGQLSPGQIPLFIGNLLPGI 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + + M N E++ + +G L++ +F++ L+S+ +F + Sbjct: 62 IINVAPLAVLLGGLISINIMASNLEIISLKTSGIRFARLVRGPIFMSFLISLIVFYLNDR 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYL---EENLFFRLDDDLYIKISKY--NPNNTLQGIFI 175 + P ++L + + + + +EN FFR + Y+ K + + + Sbjct: 122 VYPGSVVRNREL--RGKEDVEEREVPKEKENAFFRNVEGRYVYYMKKINRETGIMDHVEV 179 Query: 176 VDSRDT--QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDIS-IMKFKSYTLQTES 232 +D + + ++ A+ G D R+ + D ++ + + ++ + Y + Sbjct: 180 LDMSENFDKIERMITAKKGRYDFKRKLWVFEDAHIYYPDTDTVEARAFIQEQKY-MDEPE 238 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 S + + ++ L E+ E SE KR + + + + Sbjct: 239 YFISLSNIIPKQKTIAELKKAIKEGSATGNEIREIL-SELGKRYSFPFASFVVSFLGLAL 297 Query: 293 ADKRALVRQRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLF---LFCISS 348 + + + I +SI G ++ + N Y P L + L +++ Sbjct: 298 G-----SHYVRGMSILNIVISILLGYAYYLVEGAFEALGMNGYLNPFLSGWIPNLLFLAA 352 Query: 349 IFLLMIKKKY 358 M + +Y Sbjct: 353 GLYFMRRAEY 362 >gi|33861942|ref|NP_893503.1| putative permease [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33640310|emb|CAE19845.1| possible permease [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 400 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 58/375 (15%), Positives = 136/375 (36%), Gaps = 23/375 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + +++ I L + I+ V + I + L + +K+ + +P+ L Sbjct: 25 LIDRWLIAQILPPMLFAISAFTVISLSVGVMFDLIRKIVEFGLPLFLAIKVLFFSLPSFL 84 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + T ++ N+ELL + + G +I P + ++IL++ F + + Sbjct: 85 VLSFPMAVLLSTLLAYGKLSANSELLALKSLGIKTSRIIAPAIAVSILMTGLTFYFNDNL 144 Query: 122 EPKCRSTIKQ-LSAKAQLALTFSYLEENL-FFRLDDDL---------------YIKISKY 164 P + L A + + ++N+ F R + +I + + Sbjct: 145 VPSSNKLAESTLRAGIGSSFSSEEGKDNIMFSRYGSRIESATNKPTKTNTFLTHIFYASW 204 Query: 165 NPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK 224 NN +QG+ ++D +I A+S D + + I +DG + + +I +F+ Sbjct: 205 FENNIMQGVTVLDFSRQDIQQILKAKSAVFDKENSSWIFSDGSIVSVDQGGQTTNI-QFE 263 Query: 225 --SYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRP-ELLETYRSEFHKRLTQWLF 281 Y + + + A + +L L + + + ++ T Sbjct: 264 KYRYPFVEGPLDLARVPKDATEMSLKQALEAERIYKETGNLKEIRRIQVRIQEKFTLPFA 323 Query: 282 PVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL 341 ++FGLI + ++ +R K + I F + ++ I +L Sbjct: 324 CLVFGLIG-SSLGSKSNLRSSKSQGFGLSVILILVYYVMSFVFSSFGVKGLLSPIIATWL 382 Query: 342 FLFCISSIFLLMIKK 356 + + ++K Sbjct: 383 PVLISMGGGIYFLRK 397 >gi|294674577|ref|YP_003575193.1| hypothetical protein PRU_1912 [Prevotella ruminicola 23] gi|294473775|gb|ADE83164.1| putative membrane protein [Prevotella ruminicola 23] Length = 662 Score = 124 bits (311), Expect = 3e-26, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 87/216 (40%), Gaps = 6/216 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K +++I + G F+ + F+ + + + ++ + SL ++ + Y+ + Sbjct: 4 IKKLDIFIAKQFGLLFVGTFFICQFVLMMQFLWRYVDELIGKGLSLEVMAQFFWYMGLML 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P P + + ++ ++EL I G S + + ++ +++L++ F +N+ Sbjct: 64 MPQAFPLAILLSSLIAFGNLGESSELTAIKAAGISLMQAFRSLIIISVLMAGISFYFQNV 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 + P+ +L + + E +F+ I + K + L GI I Sbjct: 124 VGPRANQDFYRLLLGMKQKSPELEIPEGVFYDGIPGSNIYVQKKDLNTGMLYGIMIYRMT 183 Query: 180 DT-QTHKIYYAQSGSIDLDRQA----IILNDGEVHR 210 + + I A SG + + + L +G + Sbjct: 184 GSYEDQAIILADSGMMQSTAEKKHLLLTLYNGVWNE 219 >gi|225619709|ref|YP_002720966.1| permease YjgP/YjgQ [Brachyspira hyodysenteriae WA1] gi|225214528|gb|ACN83262.1| permease YjgP/YjgQ [Brachyspira hyodysenteriae WA1] Length = 417 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 67/420 (15%), Positives = 139/420 (33%), Gaps = 65/420 (15%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YI+ FL LF FI + + + I L+ ++ L + L++ Y++P Sbjct: 1 MKKINKYIILETIGPFLAGILFFTFIFVIQLLPELIRLIVNNGAPLFMSLEVFVYMLPFN 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P M + ++ + E++++ G + + P++ L + IF N+ Sbjct: 61 IAITIPMSILMASIIGYGRLSSDNEIIVMRALGFPHMRIYMPIIILGVFTFIFSLFFNNV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIKISKYNPNNTLQGIFIVDSR 179 I + + L + + + F + D L I SKY + ++ + I D Sbjct: 121 IMSESNYRYRALISYMVNIKPSIAVGKLEFSDIPDMGLSIG-SKYADDTSMSNVVIYDRS 179 Query: 180 DTQTHKIYYAQSGSIDLDRQ-----AIILNDGEVHRKSPISKDIS--IMKFKSYTLQT-- 230 DT+ ++ A+ G + + L DG V P IS F S + Sbjct: 180 DTK--RVITAKYGLWKNNEANAQVVTLTLYDGVVQEM-PGYGFISNDYTVFDSMDINIVR 236 Query: 231 ESANSSTIVLKANDQNLS---FLLNPNPNNP---------------------------NY 260 + S+ + +N + ++ Sbjct: 237 NVSTLSSHERGLREMPAWKIMEKINQTKIDADKSVNEQINGMIVNAYNNIDTNAVSITSF 296 Query: 261 RPELLETYRSE--------------------FHKRLTQWLFPVIFGLISIVAADKRALVR 300 E ++T +E FHK ++ + LI Sbjct: 297 SNEYIQTNSAELTSLREKAMEEAVPYFYYVEFHKFISIPAACLFMVLIGAPLGIVGKRSG 356 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + I + I + + I + +P I + + + + LMI+ +++ Sbjct: 357 KGFGFGLSVIVVVIYYLLITAAELIAGGKKVSP-LIAMWFPNIVLAAMGSFLMIRSFFSR 415 >gi|326796829|ref|YP_004314649.1| permease YjgP/YjgQ family protein [Marinomonas mediterranea MMB-1] gi|326547593|gb|ADZ92813.1| permease YjgP/YjgQ family protein [Marinomonas mediterranea MMB-1] Length = 369 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 62/364 (17%), Positives = 130/364 (35%), Gaps = 25/364 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ F Y+ + + S L ++ I + + + + S L I G+ +P+ Sbjct: 1 MRLF-RYLAKEVLVSTAGVTLILLLIILSGRFVNYLGRAAEGKMSFEFLFIILGFHVPSF 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M+ P F + + E+ I+ ++G S++ L L +A LL++ Sbjct: 60 IQMILPLAFFLSLLLAYGRLYIENEMSILFSSGISKVKLTVYTLGIAGLLTLTSAFVNFW 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD--- 177 + P + + F +++ F S + IF+ D Sbjct: 120 LSPYSEYQAELARQEQDQLTAFDFIQPGRFQGRGQQTTYVASFTPEEGWMNNIFLSDFVR 179 Query: 178 --SRD-TQTHKIYYAQSGSIDLDR--QAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 RD A+ ++ + +I DG + +P + + IM+F +Y ++ E Sbjct: 180 KNGRDIPVQTIAKNAEQIRLETEGGLNYLIFKDGVRYEGTPGAANYRIMEFDTYAIRLED 239 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 TI KA + L N + Y +E H R+ + I +I + Sbjct: 240 KAPGTID-KAYAVPTTALFNSDNP----------KYIAELHWRIALVIMIPILAIIGVS- 287 Query: 293 ADKRALVRQRKKIH--PIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 + RQ + P + + + G+ + K + P ++ + + + Sbjct: 288 -LSQVNPRQGRFFKMLPAILLMIVYLGLLIWGKTALEK-GKIPLHLGLWWAHGTFAIIAY 345 Query: 351 LLMI 354 LL + Sbjct: 346 LLFL 349 >gi|123966805|ref|YP_001011886.1| putative permease [Prochlorococcus marinus str. MIT 9515] gi|123201171|gb|ABM72779.1| possible permease [Prochlorococcus marinus str. MIT 9515] Length = 386 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 58/377 (15%), Positives = 127/377 (33%), Gaps = 29/377 (7%) Query: 3 SFELYILRCIGR-SFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + +I+ + F F + V + I + + I LKI +P L Sbjct: 10 LIDKWIISKLIPILFFAISAFTIVSLSVGVMFDLIRKIVEYGLPIFIALKIFFLSLPGFL 69 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + +++ N+E+L + + G + ++ P L LA+ ++ F + + Sbjct: 70 VIAFPMSVLLSCLLTYGNLSSNSEILALKSLGVNNFRVVLPSLLLAVFMTFLTFTFSDNL 129 Query: 122 EPKCRSTIKQLSA--------------KAQLALTFSYLEENLFFRLDDD-----LYIKIS 162 P L + S ++ N + D Sbjct: 130 VPISNRLAADLLQNSMGKSMRTERGRYNISFSKYGSIVDSNT-NKPIDGASHLTHIFYAR 188 Query: 163 KYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK 222 ++ T+ I ++D T + AQ+G D + + N+G++ + +S + Sbjct: 189 RFLKK-TMYDITVIDFSKKGTKILITAQNGVFDEELSSWQFNNGKI-MATEDEGSVSTII 246 Query: 223 FKSYT--LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRP-ELLETYRSEFHKRLTQW 279 F +Y L + + I L AN+ +S + + ++++T Sbjct: 247 FDTYIYPLDNGPSKLAEIPLDANNMTISQARKAQKMYEMSGNTKESRKMKVRIYEKMTLP 306 Query: 280 LFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ--NPYYIP 337 + ++F LI + +R K + I F + + P++ Sbjct: 307 MSCIVFALIG-STLGIKQNIRSSKSQGFGISIILIFLYYLTCFVFSSMGVIGILTPFFAA 365 Query: 338 ILYLFLFCISSIFLLMI 354 + + +F FLL Sbjct: 366 WIPVLMFLGFGTFLLWR 382 >gi|330874292|gb|EGH08441.1| hypothetical protein Pgy4_05802 [Pseudomonas syringae pv. glycinea str. race 4] Length = 328 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 56/316 (17%), Positives = 116/316 (36%), Gaps = 31/316 (9%) Query: 49 LLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAI 108 + I G+ +P L ++ P + + +E+ ++ TG S+ L+ + A Sbjct: 1 MFLIMGFRLPGFLQVILPLGLFLGILMAYGRLYLESEMTVLAATGMSQQRLLAITMGPAT 60 Query: 109 LLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYNPN 167 L+ + + + P+ + L K F L F L D I + + + Sbjct: 61 LVGLLVAWLSFSLAPQGATQFSLLINKQDAMTEFDTLVPGRFQALRDGTRITYTKELSED 120 Query: 168 NT-LQGIFIV------DSRDTQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKD 217 + L G+FI D + A+ G ++ +IL +G + +P + D Sbjct: 121 RSQLAGVFISEKRMSGDKSKDNGITVLVAEKGHQEVRPNGSRFLILENGYRYDGNPGAAD 180 Query: 218 ISIMKFKSYTLQTESANSSTIVLKANDQNLSFLL-NPNPNNPNYRPELLETYRSEFHKRL 276 ++K+ +Y S + S L+ NP P + +E R+ Sbjct: 181 YRVIKYDTYGAMLPKPEISEEITDREAIPTSELIGNPAPRSV-----------AELQWRI 229 Query: 277 TQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 + L I L++I R RQ + + L + ++ + I+ + + Sbjct: 230 SLPLSVFIVTLMAIP--LSRVNPRQGRYLK-----LLPAILLYMSYLAILISVRSSLEKG 282 Query: 337 PI-LYLFLFCISSIFL 351 + L L ++ + I+L Sbjct: 283 KLPLSLGMWWVHGIYL 298 >gi|325853208|ref|ZP_08171296.1| permease, YjgP/YjgQ family [Prevotella denticola CRIS 18C-A] gi|325484384|gb|EGC87307.1| permease, YjgP/YjgQ family [Prevotella denticola CRIS 18C-A] Length = 703 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 90/208 (43%), Gaps = 4/208 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 ++ +++I R G F + +F+ + + + ++ + S+++L + Y+ + Sbjct: 63 IRKLDIFIARQFGMLFAGTFFISLFVLMMQFLWRYVDDLIGKGLSMDVLGQFFWYMSLMM 122 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P P + + ++ ++EL I + G S + + ++ +++L++ F +N Sbjct: 123 VPQALPLAILLSSLISYGNLGESSELTAIKSAGISLVQSFRGLIVISVLIACGSFYFQNN 182 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 + P + I QL + + E +F+ + + + K + L I + Sbjct: 183 VGPSAQKHIAQLLISMKQKSPELEIPEGIFYDGIPNTNLYVEKKDLKTGHLYNIMVYRMT 242 Query: 180 DT-QTHKIYYAQSGSIDLD--RQAIILN 204 D+ + I A SG + ++ ++LN Sbjct: 243 DSYEDQAIILADSGMLQSTAEKKHLVLN 270 >gi|288925668|ref|ZP_06419600.1| putative permease [Prevotella buccae D17] gi|288337606|gb|EFC75960.1| putative permease [Prevotella buccae D17] Length = 638 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 87/208 (41%), Gaps = 4/208 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K +++I + G F+ + F+ + + + I+ + S+ +L + Y+ + Sbjct: 4 IKKLDIFIAKQFGLLFVGTFFICQFVLMMQFLWRYIDELIGKGLSMEVLAQFFWYMSLML 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P P + + ++ ++EL I G S + + ++F+ +++ F +N Sbjct: 64 VPQALPLAILLSSLITFGNLGESSELTAIKAAGISLMQTFRSLIFITVVVMGCSFYFQNN 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 I P+ I QL + + E +F+ + + + K N L GI I Sbjct: 124 IGPQANMKITQLLISMKQKSPELEIPEGIFYDGIPNCNLYVQKKNVKTGKLYGIMIYRMT 183 Query: 180 DT-QTHKIYYAQSGSIDLD--RQAIILN 204 ++ + I A SG + ++ ++L Sbjct: 184 NSYEDAAIILADSGMLQSTAEKKHLVLT 211 >gi|282879343|ref|ZP_06288087.1| putative membrane protein [Prevotella buccalis ATCC 35310] gi|281298540|gb|EFA90965.1| putative membrane protein [Prevotella buccalis ATCC 35310] Length = 635 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 87/208 (41%), Gaps = 4/208 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K +L+I + G F + F+ + + + ++++ S+ ++ + Y+ + Sbjct: 4 IKKLDLFIAKQFGLLFAGTFFICQFVLMMQFLWRYVDVLIGKGLSMEVMAQFFWYMGLFL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P P + + ++ ++EL I + G S + + ++ +++++ F +N Sbjct: 64 VPQALPLAILLASLITFGNLGESSELTAIKSAGISTMRTFRSLIVISVVVCFCSFYFQNY 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 + P + QL + E +F+ + + + K + + L GI I Sbjct: 124 VGPSANMKMAQLMISMSQKNPELEIPEGIFYDGIPNSNLYVQKKDMDTGKLYGIMIYRMT 183 Query: 180 DT-QTHKIYYAQSGSIDL--DRQAIILN 204 + + I A SG + D++ ++L Sbjct: 184 GSYEDQAIILADSGMLQTTADKKHLLLT 211 >gi|228470134|ref|ZP_04055043.1| permease, YjgP/YjgQ family [Porphyromonas uenonis 60-3] gi|228308272|gb|EEK17127.1| permease, YjgP/YjgQ family [Porphyromonas uenonis 60-3] Length = 683 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 42/203 (20%), Positives = 87/203 (42%), Gaps = 1/203 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K ++++R LM+ L F+ + + Q I+ + + +LL++ Y VL Sbjct: 11 KIMYIFMVRSFLPLLLMTILICWFVVLMQFLWQHIDDLVGKGMDVGVLLEVIFYAGLYVL 70 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P P + + ++ ELL + + G ++KP++ L +++ LF+ + Sbjct: 71 PTAVPLGVLLASLMTFGNLGERLELLAMKSAGVPLSKIMKPLVILVTCIALGLFVYLDRG 130 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSRD 180 K + Q+ A+ A L + +FF D I + + +TL + I D + Sbjct: 131 VQKASVRVYQILFSARYARPELELPKGIFFNGIDGYSIYVGDKDVATSTLYNVMIYDLSE 190 Query: 181 TQTHKIYYAQSGSIDLDRQAIIL 203 + +I A +G + +D + L Sbjct: 191 QRAPRIILADTGRLLMDDSKLYL 213 Score = 38.8 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 49/141 (34%), Gaps = 11/141 (7%) Query: 224 KSYTLQTESANSSTIV----LKANDQNLSFLLNPNPNNPNYRPELLETYRS---EFHKRL 276 YTL T +S K + L L + Y + YR E H++ Sbjct: 371 THYTLDTLMDRASDQDKLMGYKQALEWLDNLSSSVQIADTYYDDAASDYRVNAQEMHRKF 430 Query: 277 TQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-PYY 335 T + ++F V A A+VR+ P+ +++ I + ++ + I Sbjct: 431 TFPVACLLFF---FVGAPLGAIVRKGGVGTPMVLAVLIFIIYYVIDTFGLKMINSGQIPV 487 Query: 336 IPILYLFLFCISSIFLLMIKK 356 ++L I + + K Sbjct: 488 WAGMWLSSAVILPLGAFLTYK 508 >gi|226940337|ref|YP_002795411.1| permease YjgP/YjgQ [Laribacter hongkongensis HLHK9] gi|226715264|gb|ACO74402.1| permease YjgP/YjgQ [Laribacter hongkongensis HLHK9] Length = 357 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 51/362 (14%), Positives = 133/362 (36%), Gaps = 9/362 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YI + + + L ++ + +L + + S + +L + +P Sbjct: 1 MKILTRYIGGNVIAASIFGLLALLSLFAFFDVLSELTDIGRGGYSFSDVLVVVALKLPRH 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + T ++ + ++E ++ +G S + + + + L ++ F++ Sbjct: 61 AFELMPLAVLIGTMVAMSLLAGSSEYAVMRTSGMSLGQVARILAGIGALFAVLTFVTGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SR 179 P ++ ++ A+ + + DD+ +I + + P+NTL GI I + Sbjct: 121 AAPWAEQASERTKLQSTGAVISGDFRSGAWIK-DDNHFINVREMLPDNTLLGINIYTYDK 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + + YA+ D L D + R + + + + ST++ Sbjct: 180 NDRLTDVRYARRAIYQPDGS-WQLEDIKETRIEANRTIARDLPSQRWESILQPELLSTLL 238 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 ++ +++ L + + Y +L L + L+++ Sbjct: 239 VEPERMSVADL-GRYIEHLATNRQNTLRYEIALWGKLFYPLACLTMALVALAF--TPVNQ 295 Query: 300 RQRKKIHPIFISLSISFGVFW---GFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 RQ IF+ + I ++ F ++ +P + +L +F + L+ ++ Sbjct: 296 RQSNLGSRIFVGILIGLAFYFINRLFGHLGLLYGWSPPLVTLLPTLIFLAVGTWFLVRQE 355 Query: 357 KY 358 + Sbjct: 356 RR 357 >gi|315606454|ref|ZP_07881469.1| conserved hypothetical protein [Prevotella buccae ATCC 33574] gi|315251860|gb|EFU31834.1| conserved hypothetical protein [Prevotella buccae ATCC 33574] Length = 638 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 87/208 (41%), Gaps = 4/208 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K +++I + G F+ + F+ + + + I+ + S+ +L + Y+ + Sbjct: 4 IKKLDIFIAKQFGLLFVGTFFICQFVLMMQFLWRYIDELIGKGLSMEVLAQFFWYMSLML 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P P + + ++ ++EL I G S + + ++F+ +++ F +N Sbjct: 64 VPQALPLAILLSSLITFGNLGESSELTAIKAAGISLMQTFRSLIFITVVVMGCSFYFQNN 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 I P+ I QL + + E +F+ + + + K N L GI I Sbjct: 124 IGPQANMKITQLLISMKQKSPELEIPEGIFYDGIPNCNLYVQKKNVKTGKLYGIMIYRMT 183 Query: 180 DT-QTHKIYYAQSGSIDLD--RQAIILN 204 ++ + I A SG + ++ ++L Sbjct: 184 NSYEDAAIILADSGMLQSTAEKKHLVLT 211 >gi|302391952|ref|YP_003827772.1| permease YjgP/YjgQ family protein [Acetohalobium arabaticum DSM 5501] gi|302204029|gb|ADL12707.1| permease YjgP/YjgQ family protein [Acetohalobium arabaticum DSM 5501] Length = 372 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 67/361 (18%), Positives = 143/361 (39%), Gaps = 14/361 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K + YIL+ + FL+ + I I + + +L+ +L+ +LK+ Y +PT+ Sbjct: 4 IKLIDKYILKEVTILFLIGLIIISIIMLSSFLFELTDLIIIRKVALSSVLKLLIYKLPTI 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P T L ++++ E+ + S LI P++ L +++S ++ Sbjct: 64 IVRAIPMSVLFATIIGLGRLSKDNEITALRMGSISIYRLILPLIILGLIISGGNYLLNEK 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVD-S 178 + P + + + L ++EN+FF+ + I KYN + T++ I I + Sbjct: 124 VVPFSNKRFQVIMNETVLKSRMPEIKENIFFKGTRNKLFYIGKYNESQSTVKDIVIYELD 183 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA-NSST 237 I A G + D + LN+G +++ + I+ KFK T+ ++ N Sbjct: 184 SKQDYPNIIMANKGRVYKDNK-WELNEGYIYKYNNDGNLINKDKFKDITVGFKANINRFA 242 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 ++ ++ L + E+H + +IF L+ + + K Sbjct: 243 DQQSPSEMSIKEL-KEEIEFLKKIGADPNSLLVEYHLKFAMPFSALIFILVGSILSIKGK 301 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL----FCISSIFLLM 353 + + I I ++ + + +N + P++ +L F I L Sbjct: 302 NSKGVNILFTIII-----IFFYYLLLSLSRSLGRNEVFSPLVAAWLTNFIFIILGAILFY 356 Query: 354 I 354 I Sbjct: 357 I 357 >gi|257462589|ref|ZP_05626999.1| hypothetical protein FuD12_01974 [Fusobacterium sp. D12] gi|317060240|ref|ZP_07924725.1| conserved hypothetical protein [Fusobacterium sp. D12] gi|313685916|gb|EFS22751.1| conserved hypothetical protein [Fusobacterium sp. D12] Length = 361 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 60/369 (16%), Positives = 134/369 (36%), Gaps = 19/369 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK ++YI + + F S + I + QI + + V+ S + G L+P + Sbjct: 1 MKKLDIYITKNFLKYFSYSLFSFLAIFVLSQIFKVLRYVNEGQLSAGEVPLFIGNLLPGI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + + M N E++ + +G L++ + ++ +S+ +F + Sbjct: 61 IINVAPLAVLLGGLISINIMASNLEIISLKTSGIRFARLVRGPILVSFFISLVVFYLNDR 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYL---EENLFFRLDDDLYIKISKY--NPNNTLQGIFI 175 + P ++L + + + L +EN FFR ++ Y+ K + + I Sbjct: 121 VYPGSVVRNREL--RGKEDVEERELPKEKENAFFRNEEGRYVYYMKKINREKGIMDYVEI 178 Query: 176 VDSRD--TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 +D + + +I A+ G D +++ I + ++ + + Sbjct: 179 LDMSEDFDKIERIITAKQGKYDFEKKIWIFKEVNLYYPETDRTESRVWIQDEKYRDEPDR 238 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 S + Q ++ L E+ E SE KR + + + + Sbjct: 239 FISLSNIVPKQQTIAELKKAIKEGSATGNEIREIL-SELGKRYSFPFASFVVSFLGLALG 297 Query: 294 DKRALVRQRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLF---LFCISSI 349 + + + I +SI G ++ + N Y P L + L +++ Sbjct: 298 -----SHYVRGMSILNIVISILLGYAYYLVEGAFEALGMNGYLNPFLSGWIPNLLFLAAG 352 Query: 350 FLLMIKKKY 358 M + +Y Sbjct: 353 LYFMRRAEY 361 >gi|237756215|ref|ZP_04584779.1| putative membrane protein [Sulfurihydrogenibium yellowstonense SS-5] gi|237691625|gb|EEP60669.1| putative membrane protein [Sulfurihydrogenibium yellowstonense SS-5] Length = 336 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 63/355 (17%), Positives = 134/355 (37%), Gaps = 26/355 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y+++ ++FL+ I Q+L + S ++ K+ + + Sbjct: 1 MKILDKYLIKLFFKNFLLLIGLFSLIITSSQLLHLPSFAYS--MNIIDFSKLLFLIDISF 58 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + F F + V S+ E+ + + G S+ L+KPV + ++ I F+ + Sbjct: 59 IKYQLLFAFFISWLLVGISLRDKNEIYAVYSAGISKKQLLKPVFIMTVIFVIIAFVFSTV 118 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + + + F +++D++ + + K NT I I + Sbjct: 119 IVPSANRERYKFLTYKVKSYILENVSPKNFSKINDNVSVYVEKKEK-NTFYNILIY---N 174 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + A+ G + +IL DG + P K +K++ YT + + I + Sbjct: 175 ASSGYLITAKEGMFISNN--LILKDGYIQL--PSGKSFDTIKYEKYTFSLDVSYIKEISM 230 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + D LL + +L R F + F + + Sbjct: 231 Q--DFKTKDLLRLAVEEDSKALSILA-------DRF---YFAIPFMFLGFIGFLSGINTY 278 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + K+ + ++S+S G Y + IE+ P + +++ + +IF L+ K Sbjct: 279 RSKET-LLTFAVSLSIGYMVLNYYFLKIIEKVPV---LFFVYPIVLVAIFYLVYK 329 >gi|332535154|ref|ZP_08410963.1| hypothetical protein PH505_cf00160 [Pseudoalteromonas haloplanktis ANT/505] gi|332035424|gb|EGI71923.1| hypothetical protein PH505_cf00160 [Pseudoalteromonas haloplanktis ANT/505] Length = 354 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 132/356 (37%), Gaps = 3/356 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ + Y+ R I ++ + L +V I+ +I+ + ++ V + L + + Y IP Sbjct: 1 MKTLDWYLGRSILQTTGFALLVLVGISTLIKFIDQLKSVGRGSYDLMTAMLYTLYTIPGD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L ++ N+EL+++ G SR+ +I V+ AI +++ + Sbjct: 61 LVVFFPMAALIGGLTGLGALASNSELVVMQAAGMSRLQIIGSVMKTAIFMAVCMMALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + K++ +A ++ ++ + + +I I + N L G+ + Sbjct: 121 GAPEAQLHAKEMRNQAIHGGDVFNTQKGVWAKDGSN-FINIEDVDENGRLNGVHMYHFDK 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + ++ ++ +L D + + + Y Q + + + Sbjct: 180 SLELTQITKAKDALSR-KEGWLLRDVNKVIITSEKTTTEQLPEEFYPSQLTAEKLGVVSV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K + + L + + TY ++L Q + + L+++ Sbjct: 239 KPESLSFTGLWS-YLTYLEQNEQDTSTYELALWRKLMQPVSVAVMLLVALSFIFGPLRTV 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + I F + + + Q P I + + I LM K+ Sbjct: 298 TMGARIIMGVVTGIVFHLTNEIFGPVVMVYQIPAIIGAVLPSIIFIGFATYLMNKR 353 >gi|262068070|ref|ZP_06027682.1| permease, YjgP/YjgQ family [Fusobacterium periodonticum ATCC 33693] gi|291378156|gb|EFE85674.1| permease, YjgP/YjgQ family [Fusobacterium periodonticum ATCC 33693] Length = 359 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 64/353 (18%), Positives = 122/353 (34%), Gaps = 9/353 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YIL + +++ FI + ++ + + S+ +L++ + IP + Sbjct: 1 MKIINKYILDELKGPIILAVFVFTFIFLLDIVVTMMEHIIVKGISVFDVLRLLSFYIPPI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + T +RN+E + + +TG S ++KP+L +AI +IF+ + Sbjct: 61 LTQTIPIGMFLGIMICFTKFSRNSESVAMVSTGMSIRAILKPILAIAIGAAIFILFLQES 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD--S 178 I P+ +K + K L+E F D I + K + + I + Sbjct: 121 IIPRSFVKLKYVGTKIAYENPVFQLKEKTFIDNLDQYSIYVDKVESDGKAKNIIAFEKPE 180 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 T+ + + + AIIL + K F + + + Sbjct: 181 DKTKFPMVLTGEEAFWKDN--AIILKQSQFISFDETGKKNLTGTFDEKRVVL-TPYFENL 237 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 LK D + + N E + Y+ E ++L V +I +L Sbjct: 238 NLKIKDVEALSITDLVKNIRKVETEEVLKYKIEIFRKLALIFSTVPLAVIGFCL----SL 293 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 R F+ I + F I + P + + + FL Sbjct: 294 GHHRISKKYSFVLAMIIIFAYIIFLNIGIVMASAGKIHPFIATWTPNVLLYFL 346 >gi|121595375|ref|YP_987271.1| permease [Acidovorax sp. JS42] gi|120607455|gb|ABM43195.1| permease YjgP/YjgQ family protein [Acidovorax sp. JS42] Length = 396 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 44/256 (17%), Positives = 89/256 (34%), Gaps = 8/256 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y +R L + ++ + ++L+ ++ +S+ S+ +L ++ L+P L Sbjct: 8 RLDRYAVRLFAVPLLTALATMLLATMLQRLLRLFDIAASTGASIASVLLLAADLVPHYLG 67 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P F M ++EL + TG S + P LA+ + +F ++ Sbjct: 68 LALPVAFTAAIFMAAARMGDDSELDAMLATGRSIARIAAPYFILALFVCVFNLYLFGRLQ 127 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSRDT 181 P R + +EEN F + + G+F+ + R Sbjct: 128 PLARYDYHVKMDAVLQTNWDAKIEENRFIDIAHGFSFSADRVEDGGRRFIGVFM-ERRQN 186 Query: 182 QTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSY--TLQTESANS 235 +I A G ++ + + L DG R++P + Y A Sbjct: 187 GIEEITTAVRGQLESNPDTRKMRLKLEDGLRVRQTPDGAIATTRFVDGYVEDFSKTRAPY 246 Query: 236 STIVLKANDQNLSFLL 251 A ++ L L Sbjct: 247 RDRGETATERTLPELW 262 >gi|94500485|ref|ZP_01307016.1| predicted Permease [Oceanobacter sp. RED65] gi|94427275|gb|EAT12254.1| predicted Permease [Oceanobacter sp. RED65] Length = 340 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 46/331 (13%), Positives = 115/331 (34%), Gaps = 27/331 (8%) Query: 32 ILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDN 91 ++ +N + + Y P L ++ P F + V M+ E+ ++ Sbjct: 1 MVIHLNKAVAGIIPPEAVFYTILYNSPGFLQLILPLGFYISILLVYGRMHSENEMTVLYA 60 Query: 92 TGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFF 151 TG + + + ++ + + + P + + + Q FS++ F Sbjct: 61 TGFGPKQVFRITMAPVTVMMLLIGFLSLYLAPTAADKLDRYLQEQQQESEFSFVTPGRFN 120 Query: 152 RLDDD--LYIKISKYNPNN-TLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQA----IILN 204 L + + +Q +F+ D + + A+SG +D + + LN Sbjct: 121 ALGKGGEKVSYAEDLSADRKQMQQVFMAD-----GNVLLLAESGQQFVDPNSGSRYLELN 175 Query: 205 DGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPEL 264 +G+ P + M F Y ++ + + + LL+ Sbjct: 176 NGKRFSGVPGDPNFEAMSFDRYAVKIAEESDVAKKARYEAVSTMELLD----------RE 225 Query: 265 LETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSY 324 Y++ H R+ + ++ +I I+A + ++ + + ++ + + Sbjct: 226 HRVYKARLHYRIGLF---ILVPIIVIMAFPLSHVKPRQGRYGKMLPAVVLYMVYYTTLIT 282 Query: 325 IIHKIEQ--NPYYIPILYLFLFCISSIFLLM 353 +EQ P ++ + +L +S +LM Sbjct: 283 ARKWMEQGDTPEWLGLWWLHGIFLSIGLMLM 313 >gi|261879842|ref|ZP_06006269.1| conserved hypothetical protein [Prevotella bergensis DSM 17361] gi|270333501|gb|EFA44287.1| conserved hypothetical protein [Prevotella bergensis DSM 17361] Length = 642 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 86/207 (41%), Gaps = 4/207 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K +++I R G FL + F+ + + + ++ + S+ IL + Y+ + Sbjct: 5 IKKLDIFITRQFGLLFLGTFFICQFVLMMQFLWRFVDDLIGKGLSMEILAQFFWYMALML 64 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P P + + ++ ++EL I G S + + ++ + +++ + F +N Sbjct: 65 VPQAFPLAILLSSLITFGNLGESSELTAIKAAGISLMQSFRSLILITMIICLGSFYFQNN 124 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 I P + QL + + E +F+ + + + K + L GI I Sbjct: 125 IGPMANMKLAQLLFSMKQKSPELEIPEGVFYDGIPNTNLYVQKKDVKTGKLYGIMIYRMT 184 Query: 180 DT-QTHKIYYAQSGSIDL--DRQAIIL 203 + + I A SG + D++ ++L Sbjct: 185 QSYEDAAIILADSGMLQSTADKKHLLL 211 >gi|212710411|ref|ZP_03318539.1| hypothetical protein PROVALCAL_01472 [Providencia alcalifaciens DSM 30120] gi|212686831|gb|EEB46359.1| hypothetical protein PROVALCAL_01472 [Providencia alcalifaciens DSM 30120] Length = 365 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 60/361 (16%), Positives = 137/361 (37%), Gaps = 27/361 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + + + + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFVLLLIFFSQKSIDILGAAVQGNIPSNLVLPLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + + +E+ ++ G + L+K L LA L ++ + + Sbjct: 62 LILPLSLFLGLLMTYSKLYTESEITVMHACGLGKSVLVKAALVLAALTALVAVANITWML 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNTLQGIFIVDSR-- 179 P +Q+ A A+ + + E F D + I + N + +F+ R Sbjct: 122 PWSSQYQEQVLADAKANPGLAAMVEGQFKTTKDGNFVLYIGEV-KGNDFKNVFLAQLRTA 180 Query: 180 DTQTHKIYYAQSGSIDLD---RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + Q + A SG + D RQ ++L+ G + + + +D I F +Y + + Sbjct: 181 NEQRPSVVVADSGYMKEDEYGRQMVVLDQGTRYEGTAMLRDFRITDFVNYQAVVDHKATD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 K + + L N + N +EFH RLT V+ L+ Sbjct: 241 VSTDKVEQKTMMQLWNEDNPEVN----------AEFHWRLTIVFSVVVMALM---VVPLS 287 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-------NPYYIPILYLFLFCISSI 349 + ++ ++ + ++ + F S + + ++ + + + YL L I ++ Sbjct: 288 EVNPRQGRVLSMIPAMLLYLIFFLLQSTLRNSADKGDIDPKYAMWAVNLGYLLLAVILNL 347 Query: 350 F 350 + Sbjct: 348 W 348 >gi|282860179|ref|ZP_06269254.1| putative membrane protein [Prevotella bivia JCVIHMP010] gi|282587068|gb|EFB92298.1| putative membrane protein [Prevotella bivia JCVIHMP010] Length = 633 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 40/221 (18%), Positives = 90/221 (40%), Gaps = 6/221 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +++I + G F + +F+ + + + I+ + ++++L + GY+ ++ Sbjct: 5 KKLDIFIAKQFGMLFTGTFFISLFVLMMQFLWRSIDDLIGKGLTVDVLAQFFGYMALMLV 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P P + + ++ ++EL I + G S + ++ IL++I F +N + Sbjct: 65 PQALPLAVLLSSLMTYGNLGESSELTAIKSAGISLFQSFRGLIATTILITILSFYFQNNV 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSRD 180 P + I QL + + E +F+ + + K + L I + D Sbjct: 125 APIAQKHIYQLLISMKQKSPELEIPEGVFYDGIPQTNLYVEKKDLNTGHLYNIMVYRMTD 184 Query: 181 T-QTHKIYYAQSGSIDLD--RQAIILN--DGEVHRKSPISK 216 + + I A SG + ++ +ILN +GE Sbjct: 185 SYEDQAIILADSGMLQSTAEKKHLILNLWNGEWFENMRSQG 225 >gi|297537469|ref|YP_003673238.1| permease [Methylotenera sp. 301] gi|297256816|gb|ADI28661.1| permease YjgP/YjgQ family protein [Methylotenera sp. 301] Length = 356 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 59/364 (16%), Positives = 143/364 (39%), Gaps = 14/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+L+ I + LM L ++ + ++Q ++ + + L +L P Sbjct: 1 MKILNKYLLKEIVSNVLMVMLALIAMFSFFDLIQELDALGKGSYGLGKILLFVLLSAPGH 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + L + R +EL+++ +G S + +L + + +I F+ + Sbjct: 61 VYDVMPVAVLVGCMYSLGQLARYSELVVLRVSGLSIFDIAVLLLKIGAIFTIITFLIGEL 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SR 179 + P T +++ KA ++ L+ + D + +I + + P+ TL I I D + Sbjct: 121 VTPFSEKTAQRMRIKATDSVVAQEFRSGLWVK-DGNSFINVEEVLPDATLLNIHIFDFDK 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + A++G ++ L D S +S ++ ++ Sbjct: 180 NAKLISTRNAKAGEFK--HESWKLKDVTDTSFDKDSVKVSQ-SLEATWHSLIRPELLNVL 236 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L ++ ++ L N+ + + Y ++ L ++ ++++ V Sbjct: 237 LIMPEKMSAWNLYTYINHLSINKQKTTRYEVALWAKMIYPLACMVMVVLALPFG----FV 292 Query: 300 RQRKKIHPIFISLSISFGVFW-----GFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 +QR I + I GV + F+++ + P + I+ +F ++ + +L Sbjct: 293 QQRAAGASTKIFVGIMLGVMYQILNRVFAHLGLLNDWPPLFSAIMPTIMFLMAGVAMLFY 352 Query: 355 KKKY 358 ++ Sbjct: 353 VERR 356 >gi|163856081|ref|YP_001630380.1| hypothetical protein Bpet1772 [Bordetella petrii DSM 12804] gi|163259809|emb|CAP42110.1| putative membrane protein [Bordetella petrii] Length = 397 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 55/366 (15%), Positives = 140/366 (38%), Gaps = 12/366 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ ++ I + +V + + +++ + + T +++L ++ + T Sbjct: 31 MSLFKRSVVAEITSHAGVVFSTLVVVWLSVLLVRLLGEAAGGTIGADVVLGLAAFSTITA 90 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP V + +T R +E+++ +G S ++PVL +AI ++ + + + Sbjct: 91 LPTVLAVSLFIAVLTTVTRNYRESEMVVWFASGLSLADWLRPVLRVAIPVAGLVAVLTLV 150 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISK--YNPNNTLQGIFIVDS 178 P I + + + S + F + + ++ ++ L +F ++ Sbjct: 151 ASPWAYRQIAEYRERFEQRSDLSKVTAGQFAESGEGQRVFFAEEPTQASDELGNVFARET 210 Query: 179 RDTQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + H + A S I+ + ++L G + P + +I ++ F Y ++ ES + Sbjct: 211 -GPEWHSVMTASSARIETEPNGDRFLVLGRGHRYDLKPGTPEIRLVDFAKYGVRLESKSG 269 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI-VAAD 294 I S P + ++ S+ R++ L + L++I + A Sbjct: 270 DPIAEARAAAERSSKARPTMQ---LVADDTDSSWSQIMWRVSMPLAALNLALLAIPLGAV 326 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 L R + + L + ++I + P+ I + + ++ L++ Sbjct: 327 NPRLGRSGDLLIAGLVGLLYMNVINLSRAWISS--GKLPFGIGVWAVHAVVLALAGYLLM 384 Query: 355 KKKYTK 360 ++ K Sbjct: 385 RRLRVK 390 >gi|332524894|ref|ZP_08401081.1| putative transmembrane protein [Rubrivivax benzoatilyticus JA2] gi|332108190|gb|EGJ09414.1| putative transmembrane protein [Rubrivivax benzoatilyticus JA2] Length = 358 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 51/354 (14%), Positives = 124/354 (35%), Gaps = 19/354 (5%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 + R + R+F + + I+ I + +++ I + + ++ + GY+ LP + Sbjct: 1 MRRELARTFGATLVVILTIVLTMFLIRTIGQAAGGVVAPQDVVLLLGYVALGHLPTMLAL 60 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 + L M R++E++I G ++PVL + + + + + P Sbjct: 61 SLFVAVVVTLGRMYRDSEMVIWFAGGIGLSRFVRPVLRTSWPVLLVIAALLLFVWPWGNR 120 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNN-TLQGIFIVDSRDTQTHK 185 +L + + S + +F D I + + +FIV ++ +T Sbjct: 121 NSLELRQRYEQRSDLSRVTPGVFQTSSDGSRVFFIERDTREGADARNVFIV-AQTGETES 179 Query: 186 IYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 + A+SG + D D + ++L G+ + + + + F++Y + + + + Sbjct: 180 VTSARSGRLERDGDDRFVVLERGQRNDVDLKTGEKAQSSFETYRVLADEKRAREAERQPP 239 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 + L +P PN + E R L+ I R+ Sbjct: 240 KAMDTLDLLQDPTRPN---------QGELTWRFGLLTGAGNMLLLGI--GLAATNPRRAS 288 Query: 304 KIHPIFISLSISF---GVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + + L + +++ + +++ F I+ L Sbjct: 289 NWNLLLALLGFVVYFNLINLSQAWVASGRLGMGAALAVVHGSAFAIALGLLWWR 342 >gi|225851251|ref|YP_002731485.1| putative permease, YjgP/YjgQ family [Persephonella marina EX-H1] gi|225646479|gb|ACO04665.1| putative permease, YjgP/YjgQ family [Persephonella marina EX-H1] Length = 337 Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats. Identities = 69/358 (19%), Positives = 128/358 (35%), Gaps = 23/358 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YI + I ++FL+ + Q+L +++ + K+ + + Sbjct: 1 MKILYRYITKNILKNFLVLIAVFSIVIVSSQLLHLPSVM--YHADITNFFKLLFLMNLSF 58 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L F F + T + +M N E+ + + G ++ LIKP++ +++++ I Sbjct: 59 LKFQLLFAFFLSTALLGFNMRENREIYAVYSAGITKGQLIKPLVVISLIIFTVSLIVSMF 118 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + ++E FF+L D++ I K N + +FI + Sbjct: 119 VVPYANRERAKFITLNIKRYFLDAVQEKNFFQLSDNVTIYTEKKE-GNRFENVFIY---N 174 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + A+ D L G + P K +I++F+SY + Sbjct: 175 RERGQTISAKEAFF--DTTTFFLKKGYIQ--IPDEKGFNILRFESYRFNIDVEYLK--KY 228 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 D LL + + L R+ LFP F I ++ Sbjct: 229 SIEDYRNKDLLMIIKKSKKDKNRALSV----LTDRI---LFPFPFLFIGVLGFMVGIKT- 280 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCI--SSIFLLMIKK 356 Q+ K I ++ IS Y I I + P +Y F+ SSI +K Sbjct: 281 QKGKDSVIATTVLISIVYLVLNFYFIKLIGK-GKIDPSVYAFVLLAYFSSITYYFYRK 337 >gi|302037952|ref|YP_003798274.1| putative YjgP/YjgQ family permease [Candidatus Nitrospira defluvii] gi|300606016|emb|CBK42349.1| putative Permease, YjgP/YjgQ family [Candidatus Nitrospira defluvii] Length = 363 Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats. Identities = 62/366 (16%), Positives = 132/366 (36%), Gaps = 11/366 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+LR + F M ++ I VI +++ +L +P + Sbjct: 1 MNILFRYMLREYVKIFGMCFAGLMTIYLVIDFFEKVRRFLRYDAHALDVLAYFVLKMPAI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P M T + ++R+ E+ + + G S + P LFL +L++ LF + Sbjct: 61 SYQIAPLAVLMATLLTIGLLSRSHEITAMRSCGISLYWITSPFLFLGTVLALVLFAFSST 120 Query: 121 IEPKCRSTIKQLSAKA--QLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVD 177 + P + +Q+ + A+ S + L + I +P L+ I + Sbjct: 121 VIPLALAKAEQIKTTRIEKRAVPVSVKAAQPWVSLGGQTLMNIDTIDPGGAVLRKIRLY- 179 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 A++ Q +L DG + R +S+ F++ L Sbjct: 180 RLSPTFELEQIAEAQRAVYSPQGWVLEDG-IRRSFRQDGTVSVNSFQTEPLPLAQIPDDF 238 Query: 238 IVLKANDQNLSFL--LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 D L + + + +L ++++ R+ I ++ I + + Sbjct: 239 TTWLELDSETMTLPEIRAYVDRLHLGGTILPRLLTDYYGRIAFPCVTFIMVVVGIALSLR 298 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF---LFCISSIFLL 352 R VR I ++++ F +W + + + P+L + L ++ F L Sbjct: 299 RTGVRGSGMAMGIGQAMAVGF-FYWSTHSVAIALGRGGALAPMLAGWMANLVFLTFGFYL 357 Query: 353 MIKKKY 358 ++K +Y Sbjct: 358 LLKVRY 363 >gi|322418226|ref|YP_004197449.1| permease YjgP/YjgQ family protein [Geobacter sp. M18] gi|320124613|gb|ADW12173.1| permease YjgP/YjgQ family protein [Geobacter sp. M18] Length = 360 Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats. Identities = 58/369 (15%), Positives = 136/369 (36%), Gaps = 21/369 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ Y+ + R + + I V+ +++++ + + S L+ IP + Sbjct: 1 MRILTRYVAKAYLRMLGLCLGSFITIYLVVDFMEKVSRFTRAGASWKYLVLFFITKIPEM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P M T L S + ++EL + + G S + P+L +++L+S+ + + Sbjct: 61 VVDSAPLAVLMATLLTLGSFSLSSELTAMRSCGVSLARISAPILAISVLMSLVVLMLGEF 120 Query: 121 IEPKCRST-IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDS 178 + PK + I Q +Y ++ + ++ ++ S + P+ N L+G+ + + Sbjct: 121 VIPKSYAQRIYIQEVLIQKKSPSTYFRQHNIWHREEGNVLRASLFEPSQNQLKGVTLWEV 180 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSY-----TLQTESA 233 + + + L Q + D V I + + Y L+ + A Sbjct: 181 QPKTGLPLRRTDAALGQLGNQGWVFKDVVVREFEGAD----ISRTRKYPQLAAPLKLKPA 236 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + + ++ L L N Y ++FH R++ + + I A Sbjct: 237 DLKVLGKYSDSMTLREL-NRYCKKIQAGGYDATRYITQFHSRISLPFGCAVMAFLGIPFA 295 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSY-IIHKIEQNPYYIPILYLFLFCISSIFLL 352 + I+ I + GF Y II+ + + + +L ++ F+ Sbjct: 296 LRGG--------RSSGIAFGIGLSIGVGFLYVIINSVIISVGQVGLLPPIAAAWATNFIF 347 Query: 353 MIKKKYTKI 361 + + + Sbjct: 348 LAAGGWLSL 356 >gi|218679464|ref|ZP_03527361.1| putative permease protein [Rhizobium etli CIAT 894] Length = 138 Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats. Identities = 52/127 (40%), Positives = 86/127 (67%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YILR +G+ FL++ L ++ I W Q+LQRINLV+ S +S+ K++ ++P++ Sbjct: 11 MKLLETYILRRVGQMFLVALLPVLAIIWTTQVLQRINLVTDSGQSIGSFAKLATMILPSI 70 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T LT+MN ++EL +ID G R LI+P+L LA ++S+F F +N+ Sbjct: 71 IPVVLPFALVIAITQTLTTMNNDSELTVIDAAGARRSVLIRPILLLAAVVSVFSFFVDNV 130 Query: 121 IEPKCRS 127 +EP+ ++ Sbjct: 131 VEPRAKT 137 >gi|88810478|ref|ZP_01125735.1| permease YjgP/YjgQ [Nitrococcus mobilis Nb-231] gi|88792108|gb|EAR23218.1| permease YjgP/YjgQ [Nitrococcus mobilis Nb-231] Length = 357 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 42/314 (13%), Positives = 111/314 (35%), Gaps = 19/314 (6%) Query: 30 IQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLII 89 ++++ + +S N+L + G L V P F + + + R++E+ + Sbjct: 23 NRLIRFLADAASGDIPANLLFTLLGLKALANLGTVLPASFFLAIVMAMGRLYRDSEMAAL 82 Query: 90 DNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENL 149 G L + +L LA+ L++ + + P T +++ A+AQ + + Sbjct: 83 AACGVGPRELCRALLLLAVPLALLVGYLSLVFGPWAEGTAQRIVAEAQQSNRLQGVRPGR 142 Query: 150 FFRLDDDLYI-KISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQA----IILN 204 F L + ++ + + GIF +D + A ++D + ++L Sbjct: 143 FLDLGAGSAVAYVASIDAEGIMHGIFARAEQD-GQPVLIAAARARREVDPETGARFLVLL 201 Query: 205 DGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPEL 264 +G+ ++ P + +++F + L + + + L + Sbjct: 202 NGQRYQGVPGQRAWRVIRFGQHGLSLGGSEPAQFSAARDGLTSWQLWHSED--------- 252 Query: 265 LETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSY 324 ++ RL+ L ++ L ++ + + + ++ + F Sbjct: 253 -RAAWAQLQWRLSMPLVTLVLTLFAL---PLSKSAPRDGRYAKLLSAVLVYVLYFNLLKV 308 Query: 325 IIHKIEQNPYYIPI 338 + Q Y + + Sbjct: 309 AQGLLSQGRYPVGL 322 >gi|296137009|ref|YP_003644251.1| permease YjgP/YjgQ family protein [Thiomonas intermedia K12] gi|295797131|gb|ADG31921.1| permease YjgP/YjgQ family protein [Thiomonas intermedia K12] Length = 377 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 48/280 (17%), Positives = 98/280 (35%), Gaps = 7/280 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 +L + R + R+F + + + + +++ + S S + + G + L Sbjct: 2 LLDLTLRREMSRNFGGAFTVLFTVVITLMLIRILGQASDGQASPQDVFLLIGLTALSYLQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V + T M ++E+ I TG R+ L+ VL + + + + Sbjct: 62 IVITLSLFLAVLLTFTRMWLDSEMTIWRTTGVGRLRLMVSVLRFSWPILLLIAALTLFAW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISK-YNPNNTLQGIFIVDSRD 180 P L + + S + F I K IFI D Sbjct: 122 PWANQQSTALRIRFEQRSDISRVAPGQFRESASGKRVFFIDKGAQAGGVAHDIFIRDDTS 181 Query: 181 TQTHKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 QT + A+S + + ++L++G + +P + +I F S ++ ++ + Sbjct: 182 GQT-VLITARSAQVQRIDGQPFLVLSNGNRYAHTPGQANYTITSFDSLDMRLDATTGLSN 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLE--TYRSEFHKRL 276 V +++L PN N P + E RL Sbjct: 241 VADNKTGPVNWLTQPNRNVPTEYLFNPAIPNWLGELSWRL 280 >gi|87121690|ref|ZP_01077577.1| hypothetical protein MED121_19119 [Marinomonas sp. MED121] gi|86162941|gb|EAQ64219.1| hypothetical protein MED121_19119 [Marinomonas sp. MED121] Length = 368 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 49/356 (13%), Positives = 126/356 (35%), Gaps = 23/356 (6%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 + + + S + ++ I + + + + + L I G+ IP+ L ++ P Sbjct: 1 MAKEVLVSTMAVSFILLLIIASGRFVSYLGRAAEGKMTFEFLFIILGFHIPSFLQIIIPL 60 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 F + + E+ I+ G S++ L L +A++ ++ + P Sbjct: 61 SFFLALLLAYGRLYIENEMSILFACGISKVKLTFYTLGIALIATLVNASISLWLAPTSEY 120 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRD------ 180 + A+ F +L+ F + +++ P ++ +FI ++ Sbjct: 121 QSQLAKAEQDQLTVFDFLQPGRFQGKGFNTT-YVAEITPEEGWMKDVFISNTSKVEGKNI 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 +A+ ++ ++ +G P D I +F +Y + + +I Sbjct: 180 PTQTLASHAEQIQLEGGDTYLVFKNGTRFEGVPGQLDYRITQFDTYAVLLDEKGELSIE- 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA-DKRALV 299 + + S + + N +E+ R++ + I +I + Sbjct: 239 DPSTKPSSEIWRSDDLNEQ----------AEWQWRISLVIMIPILAIIGTSLSQVNPRQG 288 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-FLFCISSIFLLMI 354 R K + I + + + WG + + + + P + ++ LF + + FL + Sbjct: 289 RFFKMLPAILLMILYLGLLIWGRTSL--EKGRIPSSFGLWWVHILFGLIAAFLFSL 342 >gi|253997950|ref|YP_003050013.1| permease [Methylovorus sp. SIP3-4] gi|253984629|gb|ACT49486.1| permease YjgP/YjgQ family protein [Methylovorus sp. SIP3-4] Length = 356 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 56/373 (15%), Positives = 141/373 (37%), Gaps = 32/373 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+ + I S ++ + ++ + ++Q + + T LN +L P Sbjct: 1 MKLLNRYLTQEIVSSIMLIMVALLAMFSFFDLIQELESIGKGTYGLNKVLMFVLLSAPGH 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + T L ++R++EL+I+ +G S T+ + +L + ++ ++ F Sbjct: 61 VYEVVPVAVLVGTMYALGQLSRHSELIILRVSGISIATIARSLLKVGLIFAVITFFVGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P T ++L +A ++ L+ + D ++ + + P++ L I I + D Sbjct: 121 VTPYSEKTAQRLRIQATDSVVAQDFRSGLWVK-DGRSFVNVEEVMPDSELMNIHIYEFDD 179 Query: 181 TQTHKIYY-AQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 T + A++G D + + KD+ F T+++E + Sbjct: 180 TFHLRTISDAKTGRFDGENWHL--------------KDVQQTHFLDKTVKSEFFPQAQWQ 225 Query: 240 LKANDQNLSFLLNPNP-----------NNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 + L+ LL ++ + + + ++ L ++ ++ Sbjct: 226 SLIRPELLNVLLVVPEKMSAWNLYFYIHHLSANKQKTSRHEIALWSKMVYPLASLVMVVL 285 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFC 345 ++ R IF + + F ++ + +P ++ LF Sbjct: 286 ALPFGFL--QQRSGGASAKIFAGIMLGIVYQVLNRVFVHLGLLNDWSPLMSAVVPTLLFL 343 Query: 346 ISSIFLLMIKKKY 358 ++ + +L + ++ Sbjct: 344 LAGLTMLFMAERR 356 >gi|303235938|ref|ZP_07322541.1| permease, YjgP/YjgQ family [Prevotella disiens FB035-09AN] gi|302483811|gb|EFL46803.1| permease, YjgP/YjgQ family [Prevotella disiens FB035-09AN] Length = 650 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 47/270 (17%), Positives = 107/270 (39%), Gaps = 25/270 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K +++I + G F + + + + + + + ++ + S+++L + GYL Sbjct: 19 IKKLDIFIAKQFGMLFAGTFVISMVVLMMQSLWKYVDKLVGKGLSIDVLAEFFGYLGLMF 78 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P P + + ++ ++EL I +G S + + ++ + ++I F +N Sbjct: 79 VPQALPLAILLSSLITFGNLGESSELTAIKASGISLVKSFRGLIVIISFITIGSFYFQNT 138 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 I P + I Q+ + + E +F+ + + + N L I I Sbjct: 139 IAPDAQKHIFQMILSMKQKSPELEIPEGIFYNGIPQTNLYVERKNLETGHLYNIMIYRMT 198 Query: 180 DT-QTHKIYYAQSGSIDLD--RQAIILN--DGEV----------------HRKSPISKDI 218 D+ + I A SG + ++ ++LN +GE +R+ SK Sbjct: 199 DSYEDQAIILADSGMLQSTAEKKHLVLNLWNGEWFENMRSQELSSSASVPYRRESFSKKK 258 Query: 219 SIMKFKSYTLQTESANSSTIVLKANDQNLS 248 I+ F S + + I A +++S Sbjct: 259 LILDFDS---DFNLTDVAGISNDARTKSIS 285 >gi|148239646|ref|YP_001225033.1| permease [Synechococcus sp. WH 7803] gi|147848185|emb|CAK23736.1| Predicted permease [Synechococcus sp. WH 7803] Length = 388 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 49/365 (13%), Positives = 129/365 (35%), Gaps = 22/365 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + +++ + L + ++ V + + + + S + I +++ +P+ L Sbjct: 18 LLDRWLIGELLSPLLFAIAAFTVVSLSVGVMFELVRQIVESGLPVAIAVQVLLLRLPSFL 77 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + M T + ++ N+EL + + G + +I P L +A+L+S F+ +++ Sbjct: 78 VISFAMATLMATLLAYSRLSANSELTALRSVGVTATRMIVPALIVALLMSGLTFVFNDVV 137 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-------------YIKISKYNPNN 168 P+ + + +A + N+ + + ++ + Sbjct: 138 VPRANRSAEITLRRALGKAIATEKGSNIVYSRFGRIQDPDGSSSKGLAQLFYARQF-KDG 196 Query: 169 TLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 + G+ ++D ++ A + + DG++ +P S F Y Sbjct: 197 VMSGVTVLDFTRAGFTQMLVADRAVWNERQAKWQFFDGQILTLTPSGSTTS-ADFDQYLY 255 Query: 229 QTESANS--STIVLKANDQNLSFLLNPNPNNPNY-RPELLETYRSEFHKRLTQWLFPVIF 285 +A + + AN+ ++ L + + ++ T + ++F Sbjct: 256 PLSAAPIRIAQLPKDANNMTVAEALRARELLEQAGDIKEARRLQVRIQEKFTLPMACLVF 315 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC 345 GLI K R + I + L + V++ S+ + P+L + Sbjct: 316 GLIGASLGAKPNSRTSRSQGFGISVVLIL---VYYVLSFSFSSLGVKGTLPPLLAAWSPV 372 Query: 346 ISSIF 350 + S+ Sbjct: 373 LISLA 377 >gi|318041350|ref|ZP_07973306.1| permease [Synechococcus sp. CB0101] Length = 388 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 45/361 (12%), Positives = 120/361 (33%), Gaps = 23/361 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + ++ + L ++ V + + + V+ + + +++ G +P L Sbjct: 13 LMDRWLSSELLGPLLFGVAAFTAVSLSVGVVFELVRKVAEAGLPPLVAMQVLGLRLPGFL 72 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P M T + ++ ++EL + + G ++ P L +A L+++ F+ ++I Sbjct: 73 VLSFPMATLMATLLAFSRLSSSSELTALRSIGVPTWRMVVPALVVAALMTVLTFVFNDVI 132 Query: 122 EPKCRSTI---------KQLSAK-------AQLALTFSYLEENLFFRLDDDLYIKISKYN 165 P + ++A+ ++ A S E+ +D + S+ Sbjct: 133 VPSANLAAADTLDAALGRSVAAERGDNVVYSRYAQLTSIDEKGRERTGNDLAQLFYSRRF 192 Query: 166 PNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKS 225 + + ++D ++ A++G + R G + + + F Sbjct: 193 REGKMYEVTLLDFTKAGHQQLLIAKTGIWNDARSMWEFRAGRIVDIDSANNRTTSADFDR 252 Query: 226 --YTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNY-RPELLETYRSEFHKRLTQWLFP 282 Y + + A ++ + R ++ Sbjct: 253 YFYPFTKAPLDVGKLPSDAAQMTVAQAWRAEALLEQAGDRKEARRLRVRIQEKFAFPAIC 312 Query: 283 VIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 ++FGLI + + + IS+ + FG + S+I + +P + Sbjct: 313 LVFGLIGSSLGVRPNA--RTSRSQGFGISVLLIFGYYLM-SFIFSSLGIKGTLLPFFAAW 369 Query: 343 L 343 + Sbjct: 370 M 370 >gi|198276083|ref|ZP_03208614.1| hypothetical protein BACPLE_02270 [Bacteroides plebeius DSM 17135] gi|198270895|gb|EDY95165.1| hypothetical protein BACPLE_02270 [Bacteroides plebeius DSM 17135] Length = 630 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 88/213 (41%), Gaps = 6/213 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K ++++L+ F + +FI + + + ++ + +N+L + T+ Sbjct: 4 IKKLDIFVLKSFLLLFSGTFFICLFIFMMQFLWRYVDELVGKGLEINVLAQFFFLSALTL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+ P + + ELL + G +I+PV+ + L + F +N+ Sbjct: 64 IPLSLPLAILLAALMTFGNFGERYELLSMKAAGIPLFRIIRPVVLFCMFLGVMSFFFQNV 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 I PK + + L + + E +F+ + I + K + + L+ + I + Sbjct: 124 IGPKAQKELWTLLVSMKQKSPEVDIPEGVFYSDIEGYNIYVKKKDRDTGILKDVLIYNFS 183 Query: 180 DT-QTHKIYYAQSGSIDLDRQ----AIILNDGE 207 D + I +A+ G ++L + L +GE Sbjct: 184 DGFENAHIIWAEEGKLELTADKKHLYLHLYNGE 216 Score = 36.9 bits (84), Expect = 5.2, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 46/108 (42%), Gaps = 8/108 (7%) Query: 228 LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPE----LLETYRSEFHKRLTQWLFPV 283 L ++ L + + LS L++ + + +Y + ++S++HK++T L + Sbjct: 325 LNGMTSAQKLKTLNSTETRLSSLMS-DWSMKSYMTREADNNIRRHQSDWHKKITLSLACI 383 Query: 284 IFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ 331 IF I A A++R+ P+ IS+ I + S + Sbjct: 384 IFFFIG---APLGAIIRKGGLGMPVVISVLIFVLYYIIDSGATRVAKS 428 >gi|301028100|ref|ZP_07191378.1| putative inner membrane protein [Escherichia coli MS 196-1] gi|312965942|ref|ZP_07780168.1| conserved hypothetical protein [Escherichia coli 2362-75] gi|299878817|gb|EFI87028.1| putative inner membrane protein [Escherichia coli MS 196-1] gi|312289185|gb|EFR17079.1| conserved hypothetical protein [Escherichia coli 2362-75] gi|313646462|gb|EFS10924.1| hypothetical protein SF2457T_5377 [Shigella flexneri 2a str. 2457T] gi|323171707|gb|EFZ57353.1| hypothetical protein ECLT68_3916 [Escherichia coli LT-68] gi|323176176|gb|EFZ61768.1| hypothetical protein ECOK1180_4866 [Escherichia coli 1180] gi|323181995|gb|EFZ67406.1| hypothetical protein ECOK1357_4673 [Escherichia coli 1357] gi|323189857|gb|EFZ75135.1| hypothetical protein ECRN5871_1644 [Escherichia coli RN587/1] gi|327250207|gb|EGE61926.1| hypothetical protein ECSTEC7V_5011 [Escherichia coli STEC_7v] gi|332083262|gb|EGI88493.1| hypothetical protein SB521682_5141 [Shigella boydii 5216-82] gi|332083699|gb|EGI88917.1| hypothetical protein SD15574_5322 [Shigella dysenteriae 155-74] gi|332087092|gb|EGI92226.1| hypothetical protein SB359474_4825 [Shigella boydii 3594-74] gi|332748941|gb|EGJ79364.1| hypothetical protein SFK671_4980 [Shigella flexneri K-671] gi|332749216|gb|EGJ79637.1| hypothetical protein SF434370_4579 [Shigella flexneri 4343-70] gi|332749777|gb|EGJ80190.1| hypothetical protein SF274771_5047 [Shigella flexneri 2747-71] gi|332763114|gb|EGJ93357.1| putative transmembrane possibly involved in transport conserved inner membrane protein [Shigella flexneri 2930-71] gi|333009259|gb|EGK28715.1| hypothetical protein SFK218_0006 [Shigella flexneri K-218] gi|333011251|gb|EGK30665.1| hypothetical protein SFK272_0204 [Shigella flexneri K-272] gi|333011932|gb|EGK31317.1| hypothetical protein SFK304_5276 [Shigella flexneri K-304] gi|333012148|gb|EGK31530.1| hypothetical protein SFK227_5241 [Shigella flexneri K-227] Length = 335 Score = 122 bits (307), Expect = 8e-26, Method: Composition-based stats. Identities = 48/334 (14%), Positives = 120/334 (35%), Gaps = 25/334 (7%) Query: 33 LQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNT 92 ++ + N++L + G +P + ++ P + L + +E+ ++ Sbjct: 1 MRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHAC 60 Query: 93 GTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFR 152 G S+ L+K + LA+ +I ++ P ++ A+A+ + L + F + Sbjct: 61 GLSKAVLVKAAMILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQ 120 Query: 153 LDDDLYIKISKYNPNNTLQGIFIVDSRDTQT--HKIYYAQSGS---IDLDRQAIILNDGE 207 + + + + + +F+ R + A SG + Q + LN G Sbjct: 121 ATNGSSVLFIESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGT 180 Query: 208 VHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLET 267 + + +D I F+ Y + + ++ L N + + Sbjct: 181 RFEGTALLRDFRITDFQDYQAIIGHQAVALDPNDTDQMDMRTLWNTD----------TDR 230 Query: 268 YRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH 327 R+E + R+T + L+ + RQ + +S+ + ++ F I Sbjct: 231 ARAELNWRITLVFTVFMMALMVVP--LSVVNPRQGR-----VLSMLPAMLLYLLFFLIQT 283 Query: 328 KIEQNPY---YIPILYLFLFCISSIFLLMIKKKY 358 ++ N P L+++ + + L ++ + Sbjct: 284 SLKSNGGKGKLDPTLWMWTVNLIYLALAIVLNLW 317 >gi|289209274|ref|YP_003461340.1| permease YjgP/YjgQ family protein [Thioalkalivibrio sp. K90mix] gi|288944905|gb|ADC72604.1| permease YjgP/YjgQ family protein [Thioalkalivibrio sp. K90mix] Length = 386 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 43/284 (15%), Positives = 99/284 (34%), Gaps = 15/284 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 ++ E +I R + + + ++ + + + + V+ ++ L + + Sbjct: 18 LRRAERFIARELWLTQAAVSVVLLLVIIGGVLARVLRDVAEGRLPVDFLPGMVAFGAFKG 77 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + V M R++E+ + +G S L + + ++A +I L + + Sbjct: 78 IVFLWPVALFLAFMLVFGRMQRDSEMTALQASGMSFAALYRALFWVAAPAAILLLVLMTM 137 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRL-DDDLYIKISKYNPNNT-LQGIFIVDS 178 + P+ + I QL A+ + F R D + + + L +FI Sbjct: 138 VVPRTEAQIDQLRDLAEQRSDLVGIAPGRFLRSRVGDQVFFAERMSADREALLEVFIYRE 197 Query: 179 RDTQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 D + A+ D + ++L +G + P + +++F+ Q + Sbjct: 198 VDGEAQITV-AERAVPDPGAEGSGFLLLENGYRYVGEPGTASFRMLEFERLRTQITEPDP 256 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQW 279 T N Q L + R+E RL Sbjct: 257 GTRRASLNAQPTPALWAQRDDPEA---------RAELEWRLAMP 291 >gi|254410176|ref|ZP_05023956.1| putative permease, YjgP/YjgQ family [Microcoleus chthonoplastes PCC 7420] gi|196183212|gb|EDX78196.1| putative permease, YjgP/YjgQ family [Microcoleus chthonoplastes PCC 7420] Length = 380 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 57/367 (15%), Positives = 130/367 (35%), Gaps = 13/367 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + YI+ + FL + + + + ++LK+ +P Sbjct: 17 SVMDRYIITELIPPFLFGMGMFSSVGVTIGSLFDLMRRAVDEGLPATLVLKVLLLSLPQF 76 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + T + ++ ++EL+ + + G S L+ P L L+++++ F Sbjct: 77 MAYAFPTSVLLATLLTYSRLSSDSELIALRSCGVSIYRLVLPALLLSLVVTGITFGFNEY 136 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRL-DDDLY----IKISKYNPNNTLQGIFI 175 + P KA ++ E N+F+R +D ++ ++G+ I Sbjct: 137 VVPASNYQATITLEKALGEEKPTFKERNIFYREYAEDKTLKRLFYAQNFD-GERMKGLTI 195 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 +D ++I A S ++ + +G ++ SP + +I++F+ LQ Sbjct: 196 LDWSQQSLNQIVTADSAIWNVAQSTWDFYNGTIYLVSPDASYRNIVRFEHQQLQLPRIPL 255 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWL-FPVIFGLISIVAAD 294 + K D + + R E + R++Q P + +V Sbjct: 256 -DLARKDRDYDEMNITQARERLELERQSGDEEDIRKLKIRISQKFALPFACVVFGLVGGS 314 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF---LFCISSIFL 351 ++ K IS+ + F + I + + Y P++ + L + Sbjct: 315 LGNQPQRTSKATGFGISVLVIFAYYM-LMAIGDALGLSNYLPPLISAWLPNLMGFAVGGF 373 Query: 352 LMIKKKY 358 L+I+ Sbjct: 374 LLIRAAR 380 >gi|77361337|ref|YP_340912.1| hypothetical protein PSHAa2421 [Pseudoalteromonas haloplanktis TAC125] gi|76876248|emb|CAI87470.1| putative membrane protein [Pseudoalteromonas haloplanktis TAC125] Length = 355 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 53/356 (14%), Positives = 133/356 (37%), Gaps = 3/356 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ + Y+ R I ++ + L +V I+ +I+ + ++ V + L + + Y IP Sbjct: 2 MKTLDWYLGRSILQTTGFALLVLVGISTLIKFIDQLKSVGRGSYDLMTAMLYTLYTIPGD 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L ++ N+EL+++ G SR+ +I V+ A+ +++ + Sbjct: 62 LVVFFPMAALIGGLTGLGALASNSELVVMHAAGMSRLQIISSVMKTAVFMALCMMALGEW 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + K++ +A ++ ++ + ++ +I I + N L G+ + Sbjct: 122 GVPEAQLQAKEMRNQAIHGGDVFNAQKGVWAKDGNN-FINIEDVDQNGKLNGVHMYHFDQ 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + ++ +L + S + + Y Q + + + Sbjct: 181 SLSLTQITKAKDALSR-ENGWLLRGVNKVKISDELITTEQVPEEFYPSQLTAEKLGVVSV 239 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K + + L + + + TY ++L Q + + L+++ Sbjct: 240 KPESLSFTGLWS-YLDYLKQNDQDTSTYELALWRKLMQPISIAVMLLVALSFIFGPLRTV 298 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + I F + + + Q P +I + + LM K+ Sbjct: 299 TMGARIIMGVVTGIVFHLTNEIFGPVVMVYQIPAFIGAVVPSIIFTGFAAYLMNKR 354 >gi|78779866|ref|YP_397978.1| putative permease [Prochlorococcus marinus str. MIT 9312] gi|78713365|gb|ABB50542.1| permease-like protein [Prochlorococcus marinus str. MIT 9312] Length = 400 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 63/385 (16%), Positives = 130/385 (33%), Gaps = 39/385 (10%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + ++L I L + I+ V + I + + L+ Y +P+ L Sbjct: 25 LIDRWLLGQIIPPMLFAISAFTVISLSVGVMFDLIRKIVEYGLPVLKALQALIYSLPSFL 84 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + T ++ N+ELL + + G +I P + ++I ++ F + + Sbjct: 85 VLSFPMAVLLSTLLSYGKLSANSELLALRSLGIKTSRIIAPAIAVSIFMTGLTFYFNDNL 144 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEEN-----LFFRLDDDL--------------YIKIS 162 P + + S+ E +F R + +I + Sbjct: 145 VPNSNKLA---ELTLRSGVGSSFNREKSKNNIIFSRKGSRIDTNNKPTKTNTFLTHIFYA 201 Query: 163 KYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK 222 NNT++ + ++D +I A+S D + + DG + + SI Sbjct: 202 SRFENNTMREVTVLDFSRVNIKQILTAKSAVFDKKNSSWVFADGSIVSTDSTGQTTSI-N 260 Query: 223 FKS--YTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRP----ELLETYRSEFHKRL 276 FK Y + + + A+D +L L Y+ + + + ++ Sbjct: 261 FKQYLYPFVEGPLDLARVPKDASDMSLKEAL---EAERIYKKIGDLKQIRKIQVRIQEKF 317 Query: 277 TQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 T ++FGLI + + R F I +++ S+I Sbjct: 318 TLPCACLVFGLIGSI---LGSQSNLRSSKSQGFGLSVILILMYYVISFICSSFGVKGLLP 374 Query: 337 PILYLFLFCISSI---FLLMIKKKY 358 PI+ + I S+ F + Y Sbjct: 375 PIIAAWFPVIISLSGGFYFLRNSNY 399 >gi|302345159|ref|YP_003813512.1| permease, YjgP/YjgQ family [Prevotella melaninogenica ATCC 25845] gi|302149884|gb|ADK96146.1| permease, YjgP/YjgQ family [Prevotella melaninogenica ATCC 25845] Length = 640 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 88/208 (42%), Gaps = 4/208 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K +++I + G F+ + +F+ + + + ++ + S+++L + Y+ + Sbjct: 4 IKKLDIFIAKQFGMLFMGTFFISLFVLMMQFLWRYVDDLIGKGLSMDVLGQFFWYMSLMM 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P P + + ++ ++EL I G S I + ++ ++I ++ F +N Sbjct: 64 VPQALPLAILLSSLISYGNLGESSELTAIKAAGISLIQSFRGLIVVSIFIAFGSFYFQNN 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 + P I QL + + E +F+ + + K + L I + Sbjct: 124 VGPIAHKHIAQLLISMKQKSPELEIPEGIFYDGIPQTNLYVEKKDLKTGHLYNIMVYRMT 183 Query: 180 DT-QTHKIYYAQSGSIDL--DRQAIILN 204 D+ + I A SG + D++ ++LN Sbjct: 184 DSYEDQAIILADSGMLQSTADKKHLVLN 211 >gi|333010222|gb|EGK29655.1| hypothetical protein SFVA6_0010 [Shigella flexneri VA-6] Length = 335 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 48/334 (14%), Positives = 120/334 (35%), Gaps = 25/334 (7%) Query: 33 LQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNT 92 ++ + N++L + G +P + ++ P + L + +E+ ++ Sbjct: 1 MRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHAC 60 Query: 93 GTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFR 152 G S+ L+K + LA+ +I ++ P ++ A+A+ + L + F + Sbjct: 61 GLSKAVLVKAAMILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQ 120 Query: 153 LDDDLYIKISKYNPNNTLQGIFIVDSRDTQT--HKIYYAQSGS---IDLDRQAIILNDGE 207 + + + + + +F+ R + A SG + Q + LN G Sbjct: 121 ATNGSSVLFIESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGT 180 Query: 208 VHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLET 267 + + +D I F+ Y + + ++ L N + + Sbjct: 181 RFEGTALLRDFRITDFQDYQAIIGHQAVALDPNDTDQMDMRTLWNTD----------TDR 230 Query: 268 YRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH 327 R+E + R+T + L+ + RQ + +S+ + ++ F I Sbjct: 231 ARAELNWRITLVFTVFMMALMVVP--LSVVNPRQGR-----VLSMLPAMLLYLLFFLIQT 283 Query: 328 KIEQNPY---YIPILYLFLFCISSIFLLMIKKKY 358 ++ N P L+++ + + L ++ + Sbjct: 284 SLKSNGGKGKLDPTLWMWTVNLIYLALAIVLNLW 317 >gi|317503835|ref|ZP_07961845.1| conserved hypothetical protein [Prevotella salivae DSM 15606] gi|315665031|gb|EFV04688.1| conserved hypothetical protein [Prevotella salivae DSM 15606] Length = 632 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 86/208 (41%), Gaps = 4/208 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K +++I + G F+ + F+ + + + I+ + S+ ++ K Y+ + Sbjct: 4 IKKLDIFIAKQFGMLFVGTFFICQFVLMMQFLWRYIDELIGKGLSMEVMAKFFWYMGLML 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P P + + ++ ++EL I G S + + ++ + I +S F+ +N Sbjct: 64 VPQALPLAILLSSLITFGNLGESSELTAIKAAGISLMQSFRSLIVITIFISGLSFVFQNN 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 I P+ + I QL Q + E +F+ + + + + L G+ I Sbjct: 124 IGPEANNKIAQLMISMQQKSPELEIPEGVFYDGIPNSNLYVQHKDLKTGKLYGVMIYRMT 183 Query: 180 DT-QTHKIYYAQSGSIDLD--RQAIILN 204 + + I A SG + ++ ++L Sbjct: 184 GSYEDQAIILADSGMLQSTAEKKHLVLT 211 >gi|288802960|ref|ZP_06408396.1| putative permease [Prevotella melaninogenica D18] gi|288334477|gb|EFC72916.1| putative permease [Prevotella melaninogenica D18] Length = 640 Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 88/208 (42%), Gaps = 4/208 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K +++I + G F+ + +F+ + + + ++ + S+++L + Y+ + Sbjct: 4 IKKLDIFIAKQFGMLFMGTFFISLFVLMMQFLWRYVDDLIGKGLSMDVLGQFFWYMSLMM 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P P + + ++ ++EL I G S I + ++ ++I ++ F +N Sbjct: 64 VPQALPLAILLSSLISYGNLGESSELTAIKAAGISLIQSFRGLIVVSIFIAFGSFYFQNN 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 + P I QL + + E +F+ + + K + L I + Sbjct: 124 VGPIAHKHIAQLLISMKQKSPELEIPEGIFYDGIPQTNLYVEKKDLKTGHLYNIMVYRMT 183 Query: 180 DT-QTHKIYYAQSGSIDL--DRQAIILN 204 D+ + I A SG + D++ ++LN Sbjct: 184 DSYEDQAIILADSGMLQSTADKKHLVLN 211 >gi|148265755|ref|YP_001232461.1| permease YjgP/YjgQ family protein [Geobacter uraniireducens Rf4] gi|146399255|gb|ABQ27888.1| permease YjgP/YjgQ family protein [Geobacter uraniireducens Rf4] Length = 359 Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats. Identities = 55/359 (15%), Positives = 128/359 (35%), Gaps = 15/359 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK F YI + + + I V+ L++I + + + +P + Sbjct: 1 MKIFSRYIATAYAKMLGLCLGAFIAIYLVVDFLEKIGRFARANAEWKFIALFFLTRVPEI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M T L ++ N+EL + G S + P+ +A +S+ Sbjct: 61 ICQTASMAVLMATLLTLGMLSLNSELTAMRGCGLSLARITAPIFAIAFAVSLSTLFVSEF 120 Query: 121 IEPKCRST-IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDS 178 + P+C + ++ + + D++ +K ++P L+GI + + Sbjct: 121 VMPRCNTQGQYIREVLIDKKSPSTFFRQQNIWHKDENYILKARLFDPATGNLKGITLWKT 180 Query: 179 -RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSY--TLQTESANS 235 + + + A G + + + D + R+ IS F + L ++A+ Sbjct: 181 GTEMEPQQRIEATQGELRGND--WLFRDVVI-REMAGGNIISTKSFPALLVKLNLKAADL 237 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + +++ + L++ + + ++ H R++ PVI I I A Sbjct: 238 KVVGKFSDNMGIRELIS-YCDKLRKGGYDPTRFLAQMHSRISLSFAPVIMAFIGIPFAM- 295 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + + I + + S G+ + + I I + L +++ +MI Sbjct: 296 -----RGGRSSGIALGIGTSLGIGFAYFIINSVILSFGQAGVLPPLVSAWATNLIFIMI 349 >gi|309784106|ref|ZP_07678748.1| conserved hypothetical protein [Shigella dysenteriae 1617] gi|308928099|gb|EFP73564.1| conserved hypothetical protein [Shigella dysenteriae 1617] Length = 335 Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats. Identities = 48/334 (14%), Positives = 120/334 (35%), Gaps = 25/334 (7%) Query: 33 LQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNT 92 ++ + N++L + G +P + ++ P + L + +E+ ++ Sbjct: 1 MRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHAC 60 Query: 93 GTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFR 152 G S+ L+K + LA+ +I ++ P ++ A+A+ + L + F + Sbjct: 61 GLSKAVLVKAAIILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQ 120 Query: 153 LDDDLYIKISKYNPNNTLQGIFIVDSRDTQT--HKIYYAQSGS---IDLDRQAIILNDGE 207 + + + + + +F+ R + A SG + Q + LN G Sbjct: 121 ATNGSSVLFIESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGT 180 Query: 208 VHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLET 267 + + +D I F+ Y + + ++ L N + + Sbjct: 181 RFEGTALLRDFRITDFQDYQAIIGHQAVALDPNDTDQMDMRTLWNTD----------TDR 230 Query: 268 YRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH 327 R+E + R+T + L+ + RQ + +S+ + ++ F I Sbjct: 231 ARAELNWRITLVFTVFMMALMVVP--LSVVNPRQGR-----VLSMLPAMLLYLLFFLIQT 283 Query: 328 KIEQNPY---YIPILYLFLFCISSIFLLMIKKKY 358 ++ N P L+++ + + L ++ + Sbjct: 284 SLKSNGGKGKLDPTLWMWTVNLIYLALAIVLNLW 317 >gi|323162060|gb|EFZ47932.1| hypothetical protein ECE128010_1825 [Escherichia coli E128010] gi|332346340|gb|AEE59674.1| conserved hypothetical protein [Escherichia coli UMNK88] Length = 335 Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats. Identities = 49/334 (14%), Positives = 120/334 (35%), Gaps = 25/334 (7%) Query: 33 LQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNT 92 ++ + N++L + G +P + ++ P + L + +E+ ++ Sbjct: 1 MRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHAC 60 Query: 93 GTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFR 152 G S+ L+K + LA+ +I I+ P ++ A+A+ + L + F + Sbjct: 61 GLSKAVLVKAAMILAVFTAIVAAINVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQ 120 Query: 153 LDDDLYIKISKYNPNNTLQGIFIVDSRDTQT--HKIYYAQSGS---IDLDRQAIILNDGE 207 + + + + + +F+ R + A SG + Q + LN G Sbjct: 121 ATNGSSVLFIESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGT 180 Query: 208 VHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLET 267 + + +D I F+ Y + + ++ L N + + Sbjct: 181 RFEGTALLRDFRITDFQDYQAIIGHQAVALDPNDTDQMDMRTLWNTD----------TDR 230 Query: 268 YRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH 327 R+E + R+T + L+ + RQ + +S+ + ++ F I Sbjct: 231 ARAELNWRITLVFTVFMMALMVVP--LSVVNPRQGR-----VLSMLPAMLLYLLFFLIQT 283 Query: 328 KIEQNPY---YIPILYLFLFCISSIFLLMIKKKY 358 ++ N P L+++ + + L ++ + Sbjct: 284 SLKSNGGKGKLDPTLWMWTVNLIYLALAIVLNLW 317 >gi|323157530|gb|EFZ43639.1| hypothetical protein ECEPECA14_0587 [Escherichia coli EPECa14] Length = 335 Score = 121 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 48/334 (14%), Positives = 120/334 (35%), Gaps = 25/334 (7%) Query: 33 LQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNT 92 ++ + N++L + G +P + ++ P + L + +E+ ++ Sbjct: 1 MRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHAC 60 Query: 93 GTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFR 152 G S+ L+K + LA+ +I ++ P ++ A+A+ + L + F + Sbjct: 61 GLSKAVLVKAAMILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQ 120 Query: 153 LDDDLYIKISKYNPNNTLQGIFIVDSRDTQT--HKIYYAQSGS---IDLDRQAIILNDGE 207 + + + + + +F+ R + A SG + Q + LN G Sbjct: 121 ATNGSSVLFIESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGT 180 Query: 208 VHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLET 267 + + +D I F+ Y + + ++ L N + + Sbjct: 181 RFEGTALLRDFRITDFQDYQAIIGHQAVALDPNDTDQMDMCTLWNTD----------TDR 230 Query: 268 YRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH 327 R+E + R+T + L+ + RQ + +S+ + ++ F I Sbjct: 231 ARAELNWRITLVFTVFMMALMVVP--LSVVNPRQGR-----VLSMLPAMLLYLLFFLIQT 283 Query: 328 KIEQNPY---YIPILYLFLFCISSIFLLMIKKKY 358 ++ N P L+++ + + L ++ + Sbjct: 284 SLKSNGGKGKLDPTLWMWTVNLIYLALAIVLNLW 317 >gi|237740742|ref|ZP_04571223.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31] gi|229422759|gb|EEO37806.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31] Length = 363 Score = 121 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 65/364 (17%), Positives = 137/364 (37%), Gaps = 13/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K ++YI + + FLM+ + + + + Q + I ++ + L+P + Sbjct: 2 IKKLDIYISKYFIKYFLMNIIGFMGVFLLAQTFKIIKYINQGKLVGGEIFDYIINLLPKM 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 P + ++ M N E++ + +G + +++ L +A ++S+F+F N Sbjct: 62 FVETAPLSVLLAGLITISIMASNLEIVSLKTSGIRFLRIVRAPLIIAFIISLFVFFVNNS 121 Query: 121 IEPKCRSTIK-QLSAKAQLALTFSYLEENLFFRLDDDLYIK----ISKYNPNNTLQGIFI 175 I K + I + +L +EN FF + D YI I++ N I + Sbjct: 122 IYTKSLAKINFYRKGEIDASLRLPTTKENAFFINNTDGYIYLMGNINRETGNAEKIEIVV 181 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN- 234 D+ ++ +I AQSG D D + +L+ ++ K+I+ +++ S + + N Sbjct: 182 YDTEISKPVEIITAQSGKYDKDNKKWMLSGVNIYNVE-TKKNITKVEYDSDRFREDPNNF 240 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + L N E Y +E KR + I I + Sbjct: 241 IRAAAEDPRMLTIKELKKTIKEQKNI-GEDTRIYLAELAKRYSFPFASFIVAFIGLSV-- 297 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLL 352 VR + + I + +G + S + N P + ++ I + Sbjct: 298 SSKYVRGGRTTLNLVICVVAGYGYYLV-SGAFEAMSLNGILNPFISSWIPNILYFIIGMY 356 Query: 353 MIKK 356 + + Sbjct: 357 FMNR 360 >gi|153820469|ref|ZP_01973136.1| membrane protein, putative [Vibrio cholerae NCTC 8457] gi|126508986|gb|EAZ71580.1| membrane protein, putative [Vibrio cholerae NCTC 8457] Length = 225 Score = 121 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 39/224 (17%), Positives = 83/224 (37%), Gaps = 5/224 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + ++ + S +++L I G +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASDGEIPTSMILSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LA++ + + + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RD 180 P + L + + L++ F R D + N L +F+ RD Sbjct: 122 PWSQDKEAHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLYNVFVAQLAPRD 181 Query: 181 TQTHKIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIM 221 + + ++ SG + RQ I L DG + P D I Sbjct: 182 SILPSVMFSHSGDVKELSDGRQIITLYDGTRYEGVPTRVDYMIT 225 >gi|152998004|ref|YP_001342839.1| permease YjgP/YjgQ family protein [Marinomonas sp. MWYL1] gi|150838928|gb|ABR72904.1| permease YjgP/YjgQ family protein [Marinomonas sp. MWYL1] Length = 371 Score = 121 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 61/359 (16%), Positives = 129/359 (35%), Gaps = 26/359 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + S L ++ + + + ++ + L I GY +P+ + Sbjct: 4 RLFRYLAKEVLVSTAGVTLILLLVILSGRFSFYLGRIADGKMTFEFLFVILGYHVPSFVQ 63 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M+ P F + + E+ ++ ++G S++ L L +A L+ + + Sbjct: 64 MILPLAFFLALLLSFGRLYIENEMSVLFSSGISKVKLAGYTLGIAFLVGLVSASINFWLA 123 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD---SR 179 P + S F +L F I + + IF+ D + Sbjct: 124 PYSEYKAAEASQAQNQLSAFDFLIPGRF-EGSGQRTTYIDSFTKEGWMNQIFLSDVVRKK 182 Query: 180 DTQTHKIYYAQSG-----SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 DT +A + S + ++ ++ +G + P + + I +F +Y ++ ES + Sbjct: 183 DTNIPIQTFAANAEQIRISSEDNQNYLVFKNGTRYEGKPGTANYRITQFDTYAIRMESKD 242 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 S I+ QN L+N + + E R++ L I +I + Sbjct: 243 ES-IIDDPYTQNTLSLINSDKLLE----------KVELQWRISLVLIIPILAIIGLS--L 289 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + RQ + + L + + I + +PI L L+ I IF+L+ Sbjct: 290 SQVNPRQGRFFKMLPAIL---LMILYIALLIWGRTSLEKGKLPIQ-LGLWWIHGIFILI 344 >gi|148242360|ref|YP_001227517.1| permease [Synechococcus sp. RCC307] gi|147850670|emb|CAK28164.1| Predicted permease [Synechococcus sp. RCC307] Length = 403 Score = 121 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 43/358 (12%), Positives = 111/358 (31%), Gaps = 23/358 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + ++ + L + V + + + V+ + + + +++ +P L Sbjct: 32 LMDRWLTGELLGPLLFGIAAFTAVTLSVGVLFELVRKVAEAGLPMGVAVQVLFLRLPGFL 91 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + T + ++ +EL + + G + + P L LA L+S+ F+ +++ Sbjct: 92 VLSFPMATLIATLLAYSRLSGGSELTALRSIGVATYRFVIPGLVLAGLMSVLTFVFNDVL 151 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLY-------------IKISKYNPNN 168 P + K+ S N+ + + ++ + Sbjct: 152 VPPANRAGYVMLHKSLGRSIDSEKGGNIIYPRYGRVTDGPKDNKERLIQLFYAKEF-KDG 210 Query: 169 TLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 + + ++D ++ A+ R G + + + F +Y Sbjct: 211 KMMDVTLIDFSRAGQKQLLSAEEAVFMEGRGTWEFRRGSIINVADRGGRNTTADFNTYYY 270 Query: 229 QTESANSSTIVLKANDQNLSFLLNPNPN----NPNYRPELLETYRSEFHKRLTQWLFPVI 284 L D N+ + N + R ++ + ++ Sbjct: 271 PLGEGPLDLASL-PKDVNVMSVAEANQALEIIEEAGDRKAARKMRVRLQEKFSFPAICLV 329 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 FGLI + R R + L I V++ +++ + P L + Sbjct: 330 FGLIG-ASLGSRPNTRTSRSQGFGISVLLI--FVYYLLAFVFSSLGVKGTLTPFLSAW 384 >gi|312973921|ref|ZP_07788092.1| conserved hypothetical protein [Escherichia coli 1827-70] gi|310331455|gb|EFP98711.1| conserved hypothetical protein [Escherichia coli 1827-70] Length = 335 Score = 121 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 48/334 (14%), Positives = 121/334 (36%), Gaps = 25/334 (7%) Query: 33 LQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNT 92 ++ + N++L + G +P + ++ P + L + +E+ ++ Sbjct: 1 MRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHAC 60 Query: 93 GTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFR 152 G S+ L+K + LA+ +I ++ P ++ A+A+ + L + F + Sbjct: 61 GLSKAVLVKAAMILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQ 120 Query: 153 LDDDLYIKISKYNPNNTLQGIFIVDSRDTQT--HKIYYAQSGS---IDLDRQAIILNDGE 207 + + + + + +F+ R + A SG + Q + LN G Sbjct: 121 ATNGSSVLFIESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGT 180 Query: 208 VHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLET 267 + + +D I F++Y + + ++ L N + + Sbjct: 181 RFEGTALLRDFRITDFQNYQAIIGHQAVALDPNDTDQMDMRTLWNTD----------TDR 230 Query: 268 YRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH 327 R+E + R+T + L+ + RQ + +S+ + ++ F I Sbjct: 231 ARAELNWRITLVFTVFMMALMVVP--LSVVNPRQGR-----VLSMLPAMLLYLLFFLIQT 283 Query: 328 KIEQNPY---YIPILYLFLFCISSIFLLMIKKKY 358 ++ N P L+++ + + L ++ + Sbjct: 284 SLKSNGGKGKLDPTLWMWTVNLIYLALAIVLNLW 317 >gi|325499819|gb|EGC97678.1| hypothetical protein ECD227_3916 [Escherichia fergusonii ECD227] Length = 335 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 45/326 (13%), Positives = 110/326 (33%), Gaps = 17/326 (5%) Query: 33 LQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNT 92 ++ + N++L + G +P + ++ P + L + +E+ ++ Sbjct: 1 MRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHAC 60 Query: 93 GTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFR 152 G S+ L+K + LA+ I I+ P ++ A+A+ + L + F + Sbjct: 61 GLSKGVLVKAAMILALFTGIVAAINVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQ 120 Query: 153 LDDDLYIKISKYNPNNTLQGIFIVDSRDTQT--HKIYYAQSGS---IDLDRQAIILNDGE 207 + + + + + +F+ R + A SG + Q + LN G Sbjct: 121 ATNGSAVLFIESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGT 180 Query: 208 VHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLET 267 + + +D I F+ Y + + +++ L N + + Sbjct: 181 RFEGTALLRDFRITDFQDYQAIIGHQAVALDPNDTDQMDMTTLWNTDSD----------R 230 Query: 268 YRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH 327 R+E + RLT + L+ + RQ + + + L S + Sbjct: 231 ARAELNWRLTLIFTVFMMALMVVP--LSVVNPRQGRVLSMLPAMLLYLLFFLIQTSLKSN 288 Query: 328 KIEQNPYYIPILYLFLFCISSIFLLM 353 + ++ ++ + + Sbjct: 289 GGKGKLDPTLWMWTVNLIYLALAIAL 314 >gi|302342717|ref|YP_003807246.1| permease YjgP/YjgQ family protein [Desulfarculus baarsii DSM 2075] gi|301639330|gb|ADK84652.1| permease YjgP/YjgQ family protein [Desulfarculus baarsii DSM 2075] Length = 359 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 50/364 (13%), Positives = 129/364 (35%), Gaps = 12/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ LY+ + F + V + + +++++ + + +L +P + Sbjct: 1 MRILGLYVAGEFLKVFGFLLVAFVSLFTLFDFIEKVDNFHEALVPASTMLMYFLLQVPEI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +++P + T L M++ E + I ++G S + P++ LA+ +++ + + Sbjct: 61 ISLLSPLAVLLGTIIALGLMSKRGETIAIKSSGVSVMRFTLPIVLLALTITLSTALINEM 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSR 179 P ++ + S F+ + I ++P L + Sbjct: 121 ALPGTKARTNHIWNVMVEKRPSSAYSHEKFWFKGNGSIYHIGLFDPLGQVLSNVVYYRFD 180 Query: 180 DT-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT-ESANSST 237 D + A+ + + L +H++ S + F E + Sbjct: 181 DHFNLAERIDARRATYIGGKWLFFL---GLHQQRLPQGGYSAVVFDELEKNLPERPEDFS 237 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + K +++ L+ + + Y+ + H +++ VI LI I A R Sbjct: 238 RLSKPSEEMGLAELSDHVGKVDAEGYDTRRYQVDMHCKISYPFICVIMALIGIPLALFRE 297 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL----FCISSIFLLM 353 R R I + + ++ + F Y P++ +L F ++ + ++ Sbjct: 298 --RGRALAPGIVVGMLVALVYWISFGYARSIFGYGGVLPPMMAAWLPNAMFALAGVGMIT 355 Query: 354 IKKK 357 ++ Sbjct: 356 SVRQ 359 >gi|323166625|gb|EFZ52384.1| hypothetical protein SS53G_3091 [Shigella sonnei 53G] Length = 335 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 48/334 (14%), Positives = 119/334 (35%), Gaps = 25/334 (7%) Query: 33 LQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNT 92 ++ + N++L + G +P + ++ P + L + +E+ ++ Sbjct: 1 MRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHAC 60 Query: 93 GTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFR 152 G S+ L+K + LA+ +I ++ P ++ A+A+ + L + F + Sbjct: 61 GLSKAVLVKAAMILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQ 120 Query: 153 LDDDLYIKISKYNPNNTLQGIFIVDSRDTQT--HKIYYAQSGS---IDLDRQAIILNDGE 207 + + + + + +F+ R + A SG + Q + LN G Sbjct: 121 ATNGSSVLFIESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGT 180 Query: 208 VHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLET 267 + + +D I F+ Y + ++ L N + + Sbjct: 181 RFEGTALLRDFRITDFQDYQAIIGHQAVVLDPNDTDQMDMRTLWNTD----------TDR 230 Query: 268 YRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH 327 R+E + R+T + L+ + RQ + +S+ + ++ F I Sbjct: 231 ARAELNWRITLVFTVFMMALMVVP--LSVVNPRQGR-----VLSMLPAMLLYLLFFLIQT 283 Query: 328 KIEQNPY---YIPILYLFLFCISSIFLLMIKKKY 358 ++ N P L+++ + + L ++ + Sbjct: 284 SLKSNGGKGKLDPTLWMWTVNLIYLALAIVLNLW 317 >gi|187250533|ref|YP_001875015.1| permease YjgP/YjgQ family protein [Elusimicrobium minutum Pei191] gi|186970693|gb|ACC97678.1| Permease YjgP/YjgQ family protein [Elusimicrobium minutum Pei191] Length = 370 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 64/365 (17%), Positives = 131/365 (35%), Gaps = 10/365 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K YI F + + + + I +++ + ++LK +P+ L Sbjct: 11 KILYRYIASKFWMPFFFAMAMFCILVLLGDFFENIKSITNGYATFRLILKYCFLNLPSWL 70 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M+ P + V++ M E +G L P++ IL+ + + + Sbjct: 71 GMLLPVACLLAVLFVISDMVAGGEWTACLASGYRPGQLFVPLIACVILVVFLNSLMQEFV 130 Query: 122 EPKCRSTIKQL-SAKAQLALTF-SYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFI-VD 177 P+ +Q+ + + F + +E N+ R++ + + T+ GI Sbjct: 131 YPRVSQKAEQVFRRQLRGDKDFQAGIERNITLRINPRQMLLAQTLQSGSLTMYGITTEFY 190 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + + K A++ D D + DG + R I F + + A Sbjct: 191 NENWEIEKQIVARNLVWDKDEKIWFYKDGVI-RYFEEGITIREEVFDTLESDLKVAPKDI 249 Query: 238 IVLKANDQNLS-FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V ++ +S L + + ++ H +L + +I LI + A Sbjct: 250 SVGDIEEKAISVRELLKKISFLGRSGLVTYKEKTNLHNKLAMPVMTIIMCLIGMPFA--- 306 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 VR+R K+ I +L +SF FW + QN P + + + + + I+ Sbjct: 307 VTVRKRGKVINIIAALVMSFS-FWWVMTMASTAGQNGILSPFIAGWGIVVLAAAAVFIEF 365 Query: 357 KYTKI 361 K KI Sbjct: 366 KIMKI 370 >gi|313200016|ref|YP_004038674.1| permease [Methylovorus sp. MP688] gi|312439332|gb|ADQ83438.1| permease YjgP/YjgQ family protein [Methylovorus sp. MP688] Length = 356 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 55/373 (14%), Positives = 141/373 (37%), Gaps = 32/373 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+ + I S ++ + ++ + ++Q + + T LN +L P Sbjct: 1 MKLLNRYLTQEIVSSIMLIMVALLAMFSFFDLIQELESIGKGTYGLNKVLVFVLLSAPGH 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + T L ++R++EL+I+ +G S T+ + +L + ++ ++ F Sbjct: 61 VYEVVPVAVLVGTMYALGQLSRHSELIILRVSGISIATIARSLLKVGLIFAVITFFVGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P T ++L +A ++ L+ + D ++ + + P++ L I I + D Sbjct: 121 VTPYSEKTAQRLRIQATDSVVAQDFRSGLWVK-DGRSFVNVEEVMPDSGLMNIHIYEFDD 179 Query: 181 TQTHKIYY-AQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + A++G D + + KD+ F T+++E + Sbjct: 180 SFHLRTISDAKTGRFDGENWHL--------------KDVQQTHFLDKTVKSEFFPQAQWQ 225 Query: 240 LKANDQNLSFLLNPNP-----------NNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 + L+ LL ++ + + + ++ L ++ ++ Sbjct: 226 SLIRPELLNVLLVVPEKMSAWNLYFYIHHLSANKQKTSRHEIALWSKMVYPLASLVMVVL 285 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFC 345 ++ R IF + + F ++ + +P ++ LF Sbjct: 286 ALPFGFL--QQRSGGASAKIFAGIMLGIVYQVLNRVFVHLGLLNDWSPLMSAVVPTLLFL 343 Query: 346 ISSIFLLMIKKKY 358 ++ + +L + ++ Sbjct: 344 LAGLTMLFMAERR 356 >gi|282880145|ref|ZP_06288865.1| putative membrane protein [Prevotella timonensis CRIS 5C-B1] gi|281306018|gb|EFA98058.1| putative membrane protein [Prevotella timonensis CRIS 5C-B1] Length = 635 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 86/207 (41%), Gaps = 4/207 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K +++ + G F + F+ + + + ++ + S+ I+ + Y+ + Sbjct: 4 IKKLDIFTAKQFGLLFAGTFFICQFVLMMQFLWRYVDDLIGKGLSMEIMAQFFWYMGLFL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P P + + ++ N+EL I ++G S +P++ L I +S F +N Sbjct: 64 VPQALPLAVLLSSLITFGNLGENSELTAIKSSGISMFRTFQPLISLTIFISFSSFYFQNY 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 + PK + QL + + E +F+ + + + K + L GI I Sbjct: 124 VGPKANMKLAQLILSMKQKSPELEIPEGIFYDGIPNSNLYVQKKDVETGKLYGIMIYRMT 183 Query: 180 DT-QTHKIYYAQSGSIDL--DRQAIIL 203 + + I A SG + D++ ++L Sbjct: 184 GSYEDQAIILADSGMLQSTADKKHLLL 210 >gi|240948566|ref|ZP_04752939.1| hypothetical protein AM305_06766 [Actinobacillus minor NM305] gi|240297074|gb|EER47645.1| hypothetical protein AM305_06766 [Actinobacillus minor NM305] Length = 309 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 45/300 (15%), Positives = 91/300 (30%), Gaps = 19/300 (6%) Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + ++ P + L +E+ ++ G + L K LFL+I + + Sbjct: 1 MAQLMLPLSLFIALLLTLGRFYAESEITVMRACGIGQGLLAKVALFLSIFTTALAVYNVF 60 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIV-- 176 + P + +L A+A+ FS L F + I N N L I++ Sbjct: 61 WLTPWAINKQSELLAEAKANPRFSALSAGQFMT-AGGYVLFIDNINYDQNKLNDIYVFQP 119 Query: 177 DSRDTQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 D + + A SG + Q + L + + + D I F++YT Sbjct: 120 DQQKKNRPSVIVADSGELKGLPNGDQILTLENSTRYEGTAKVADFRISHFENYTAYLGHQ 179 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + + L+ + E R+E R I L+++ Sbjct: 180 DVDSDEK---------LVQRADWAKLVADKSPEA-RAELQWRFALIFATPIMALLAVP-- 227 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 RQ + + L + ++ + + ++M Sbjct: 228 MSSVNPRQGRFAKLLPALLLYLIYFLLQSTLKSSGASGKLDPTILMPVVSVAFLILGIVM 287 >gi|121594280|ref|YP_986176.1| permease [Acidovorax sp. JS42] gi|120606360|gb|ABM42100.1| permease YjgP/YjgQ family protein [Acidovorax sp. JS42] Length = 363 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 47/331 (14%), Positives = 126/331 (38%), Gaps = 20/331 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ I + + R+F + + +V + + +++ + S + + + ++ + G+ + LP Sbjct: 2 LFDSSIRKELARTFGATLVVLVTVVMTMMLIRTLGQASRGSVNPSDVMLVMGFTVLGQLP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + + L+ M R++E++I + G ++L+ P+ + + + + ++ Sbjct: 62 TILSLSLFVTVVGALSRMYRDSEMVIWFSAGRGLMSLLAPLFRFSWPVMLTIAALSLVVW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPN-NTLQGIFIVDSRD 180 P I++L + + + F + I K P+ N+ +FI + + Sbjct: 122 PWANRQIQELKTQYEQRSDVDRIAPGEFQESSNGSRVFFIDKDAPDANSASNVFIATN-E 180 Query: 181 TQTHKIYYAQSGS--IDLDRQAIILNDGEVHRKSPISKDISIMKFKSY-TLQTESANSST 237 + AQS I + +L++G+ + + +F Y TL + + Sbjct: 181 PNRETVTSAQSARLEIRNGERMALLSNGQRLETLRDKPGLRVSEFAEYGTLVGGGSQNDP 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 ++ L++ + +++E R+ L + F + + A Sbjct: 241 EAASIKTRDTWELVS----------DPQPRHQAELGWRIGMALAALNFVV--LGLAVAVV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHK 328 R + +F +F V++ + Sbjct: 289 NPRAGRSTSLVFALF--AFVVYYNLMTVGQT 317 >gi|325268898|ref|ZP_08135523.1| hypothetical protein HMPREF9141_0732 [Prevotella multiformis DSM 16608] gi|324988870|gb|EGC20828.1| hypothetical protein HMPREF9141_0732 [Prevotella multiformis DSM 16608] Length = 640 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 90/208 (43%), Gaps = 4/208 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 ++ +++I R G F + +F+ + + + ++ + S+++L + Y+ + Sbjct: 4 IRKLDIFIARQFGMLFAGTFFISLFVLMMQFLWRYVDDLIGKGLSVDVLGQFFWYMSLMM 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P P + + ++ ++EL I + G S + + ++ +++L++ F +N Sbjct: 64 VPQALPLAILLSSLISYGNLGESSELTAIRSAGISLVQSFRGLIVISVLIACGSFYFQNN 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 + P + I QL + + E +F+ + + + K + L I + Sbjct: 124 VGPSAQKHIAQLLISMKQKSPELEIPEGIFYDGIPNTNLYVEKKDLKTGHLYNIMVYRMT 183 Query: 180 DT-QTHKIYYAQSGSIDLD--RQAIILN 204 D+ + I A SG + ++ ++LN Sbjct: 184 DSYEDQAIILADSGMLQSTAEKKHLVLN 211 >gi|222110917|ref|YP_002553181.1| permease yjgp/yjgq family protein [Acidovorax ebreus TPSY] gi|221730361|gb|ACM33181.1| permease YjgP/YjgQ family protein [Acidovorax ebreus TPSY] Length = 363 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 47/331 (14%), Positives = 125/331 (37%), Gaps = 20/331 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ I + + R+F + + +V + + +++ + S + + + ++ + G+ + LP Sbjct: 2 LFDSSIRKELARTFGATLVVLVTVVMTMMLIRTLGQASRGSVNPSDVMLVMGFTVLGQLP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + + L+ M R++E++I + G ++L+ P+ + + + + ++ Sbjct: 62 TILSLSLFVTVVGALSRMYRDSEMVIWFSAGRGLMSLLAPLFRFSWPVMLTIAALSLVVW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPN-NTLQGIFIVDSRD 180 P I++L + + + F + I K P+ N+ +FI + + Sbjct: 122 PWANRQIQELKTQYEQRSDVDRIAPGEFQESSNGSRVFFIDKDAPDANSASNVFIATN-E 180 Query: 181 TQTHKIYYAQSGS--IDLDRQAIILNDGEVHRKSPISKDISIMKFKSY-TLQTESANSST 237 + AQS I + +L++G+ + + +F Y TL + + Sbjct: 181 PNRETVTSAQSARLEIRNGERMALLSNGQRLETLRDKPGLRVSEFAEYGTLVGGGSQNDP 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 ++ L++ + +++E R+ L + F + A Sbjct: 241 EAASIKTRDTWELVS----------DPQPRHQAELGWRIGMALAALNFV--VLGLAVAVV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHK 328 R + +F +F V++ + Sbjct: 289 NPRAGRSTSLVFALF--AFVVYYNLMTVGQT 317 >gi|188996313|ref|YP_001930564.1| permease YjgP/YjgQ family protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188931380|gb|ACD66010.1| permease YjgP/YjgQ family protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 336 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 59/355 (16%), Positives = 131/355 (36%), Gaps = 26/355 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y+++ ++F++ I Q+L + S ++ K+ + + Sbjct: 1 MKILDKYLIKLFFKNFILLIGLFSLIITSSQLLHLPSFAYS--MNIIDFSKLLFLIDISF 58 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + F F + V S+ E+ + + G S+ L+KPV + ++ I F+ + Sbjct: 59 IKYQLLFAFFISWLLVGISLRDKNEIYAVYSAGISKKQLLKPVFIMTVIFVIIAFVFSTV 118 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + + + F +++D++ + + K NT I I + Sbjct: 119 IVPSANRERYKFLTYKVKSYILENVSPKNFSKINDNVSVYVEKKEK-NTFYNILIY---N 174 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + A+ G + +IL DG + P K +K++ YT + + I + Sbjct: 175 ASNGYLITAKEGMFISNN--LILKDGYIQL--PSEKSFDTIKYEKYTFSLDVSYIKEISM 230 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + + L + L + + F + F + + Sbjct: 231 QDF-RTKDLLKLAVEEDSKVLSILADRFY-----------FVIPFMFLGFIGFLSGINTY 278 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + K+ + ++S+S G Y + IE+ P + +++ + IF L+ K Sbjct: 279 RSKET-LLTFAVSLSIGYMVLNYYFLKIIEKMPA---LFFVYPILLIVIFYLVYK 329 >gi|325287934|ref|YP_004263724.1| permease YjgP/YjgQ family protein [Cellulophaga lytica DSM 7489] gi|324323388|gb|ADY30853.1| permease YjgP/YjgQ family protein [Cellulophaga lytica DSM 7489] Length = 478 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 41/234 (17%), Positives = 85/234 (36%), Gaps = 16/234 (6%) Query: 25 FIAWVIQILQR-INLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRN 83 + ++ Q + I ++ L I+ K Y +P+++ V P + + ++ N Sbjct: 1 MLIFIFQTIWLYIGDLAGKGLDLEIIGKFIFYFMPSLIDKVLPLTVVLSSILTFGTLAEN 60 Query: 84 TELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFS 143 E + +G S ++ ++ + L + F N + P I L + Sbjct: 61 YEFAAMKASGISLQRAMRTIIIFVLFLGVVAFFFANNVAPAAAHKIYNLKRNIGNVKPAA 120 Query: 144 YLEENLFFRLDDDLYIKISKYNPNNT--LQGIFIVDSRDTQTHKIYY-AQSGSI----DL 196 + E +F + + IK+ K + N L+ I I + + A+ G + D Sbjct: 121 IIAEGIFSD-FEGMNIKVDKKSGENDRFLENIIIHKKSNNVISNVVIKAKKGELVSSEDS 179 Query: 197 DRQAIILNDGEVHRKSPISKD-------ISIMKFKSYTLQTESANSSTIVLKAN 243 D +IL DG + + KF Y + + + S L+ + Sbjct: 180 DIVQLILKDGNYYEDVQSKNSKTKLKVPFAKAKFNEYIINIQLTDMSDQDLEED 233 >gi|260450919|gb|ACX41341.1| permease YjgP/YjgQ family protein [Escherichia coli DH1] Length = 359 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 51/358 (14%), Positives = 130/358 (36%), Gaps = 25/358 (6%) Query: 9 LRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFC 68 +R +S L ++ I + ++++ + N++L + G +P + ++ P Sbjct: 1 MRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLS 60 Query: 69 FAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRST 128 + L + +E+ ++ G S+ L+K + LA+ +I ++ P Sbjct: 61 LFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAGPWSSRH 120 Query: 129 IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT--HKI 186 ++ A+A+ + L + F + + + + + + +F+ R + Sbjct: 121 QDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKGNARPSV 180 Query: 187 YYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 A SG + Q + LN G + + +D I F+ Y + + Sbjct: 181 VVADSGHLTQLRDGSQVVTLNQGTRFEGTAMLRDFRITDFQDYQAIIGHQAVALDPNDTD 240 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 ++ L N + + R+E + +T + L+ + RQ + Sbjct: 241 QMDMRTLWNTD----------TDRARAELNWCITLVFTVFMMALMVVP--LSVVNPRQGR 288 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFLFCISSIFLLMIKKKY 358 +S+ + ++ F I ++ N P L+++ + + L ++ + Sbjct: 289 -----VLSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIVLNLW 341 >gi|294341186|emb|CAZ89587.1| putative permease YjgP/YjgQ [Thiomonas sp. 3As] Length = 377 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 48/280 (17%), Positives = 98/280 (35%), Gaps = 7/280 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 +L + R + R+F + + + + +++ + S S + + G + L Sbjct: 2 LLDLTLRREMSRNFGGAFTVLFTVVITLMLIRILGQASDGQASPQDVFLLIGLTALSYLQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V + T M ++E+ I TG R+ L+ VL + + + + Sbjct: 62 IVITLSLFLAVLLTFTRMWLDSEMTIWRTTGVGRLRLMISVLRFSWPILLLIAALTLFAW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISK-YNPNNTLQGIFIVDSRD 180 P L + + S + F I K IFI D Sbjct: 122 PWANQQSTALRIRFEQRSDISRVAPGQFRESASGKRVFFIDKGAQAGGVAHDIFIRDDTS 181 Query: 181 TQTHKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 QT + A+S + + ++L++G + +P + +I F S ++ ++ + Sbjct: 182 GQT-VLITARSAQVQRIDGQPFLVLSNGNRYAHTPGQANYTITSFDSLDMRLDATIGLSN 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLE--TYRSEFHKRL 276 V +++L PN N P + E RL Sbjct: 241 VADNKTGPVNWLTQPNRNVPTEYLFNPAIPNWLGELSWRL 280 >gi|312885912|ref|ZP_07745544.1| permease YjgP/YjgQ family protein [Mucilaginibacter paludis DSM 18603] gi|311301719|gb|EFQ78756.1| permease YjgP/YjgQ family protein [Mucilaginibacter paludis DSM 18603] Length = 463 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 80/210 (38%), Gaps = 16/210 (7%) Query: 24 VFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRN 83 +F+ ++ + + I+ + +L++ Y T + M P + + ++ N Sbjct: 1 MFVLLMLFLWKYIDDLIGKGFEWYTILELMMYASATNVAMALPLSVLLSSIMTYGTLGEN 60 Query: 84 TELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFS 143 EL+ I + G S + P++ + LS+ F + + P L A+ + S Sbjct: 61 YELVAIKSAGISLSRALYPMVIVVAALSVAAFAFSDYMLPVANLKFYSLLYDARKQKSAS 120 Query: 144 YLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSRDTQTH-----------KIYYAQS 191 ++E +F +++ K +P+ L G+ I + T + +A+ Sbjct: 121 LIKEGVFNNSFPGYSVRVQKKDPDGQLLHGVMIYERAGGSTSMQPTGASSSGNNVIFAKE 180 Query: 192 GSI----DLDRQAIILNDGEVHRKSPISKD 217 G + D I L DG + + S Sbjct: 181 GRMFKSFDNAFLIIKLKDGVRYEEDASSNG 210 Score = 46.5 bits (109), Expect = 0.007, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 52/111 (46%), Gaps = 6/111 (5%) Query: 245 QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKK 304 ++L ++ P + ++L Y E+ K+ T ++ LI A A++R+ Sbjct: 327 RSLKDIVKPKGDTYIENDKILRRYLIEYQKKFTLSAACLVLFLIG---APLGAIIRKGGL 383 Query: 305 IHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLM 353 P+ IS+ F +++ S I K ++ P+L ++ +F ++ I L + Sbjct: 384 GLPVVISVVF-FLIYYIISTIGEKSAKDGNISPVLGTWVAIFVLAPIGLFL 433 >gi|315125734|ref|YP_004067737.1| hypothetical protein PSM_A0636 [Pseudoalteromonas sp. SM9913] gi|315014248|gb|ADT67586.1| hypothetical protein PSM_A0636 [Pseudoalteromonas sp. SM9913] Length = 355 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 131/356 (36%), Gaps = 3/356 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ + Y+ R I ++ + + +V I+ +I+ ++++ V + + + + Y IP Sbjct: 2 MKTLDWYLGRSILQTTGFALMVLVGISTLIKFIEQLKSVGRGSYDIMTAMLYTIYSIPDD 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L ++ N+EL+++ G SR+ +I V+ AI +++ + Sbjct: 62 LVVFFPMAALIGGLTGLGALASNSELVVMQAAGMSRLQIIGSVMKTAIFMALCVMALGEW 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + K++ +A ++ ++ + ++ +I I + N L+G+ + D Sbjct: 122 GAPAAQLHAKEMRNQAIHGGDVFNAQKGVWAKDANN-FINIEDVDQNGMLRGVNMYHF-D 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ +L D S + + Y Q + + + Sbjct: 180 KSLSLTQITKAKEAVGRDSGWLLRDVNKVMISEELITTEQVSEEFYPSQLTAEKLGVVSV 239 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K + S L + + TY ++L Q + + L+++ Sbjct: 240 KPESLSFSGLWS-YLAYLQQNEQDTSTYDLALWRKLMQPVSIAVMLLVALSFIFGPLRTV 298 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + I F + + + Q P I + + LM K+ Sbjct: 299 TMGARIIMGVVTGIVFHLTNEIFGPVVMVYQIPAIIGAVLPSILFTGFAAYLMNKR 354 >gi|170766592|ref|ZP_02901045.1| putative permease [Escherichia albertii TW07627] gi|170124030|gb|EDS92961.1| putative permease [Escherichia albertii TW07627] Length = 335 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 48/334 (14%), Positives = 119/334 (35%), Gaps = 25/334 (7%) Query: 33 LQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNT 92 ++ + N++L + G +P + ++ P + L + +E+ ++ Sbjct: 1 MRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHAC 60 Query: 93 GTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFR 152 G S+ L+K + LA+ +I ++ P ++ A+A+ + L + F + Sbjct: 61 GLSKAVLVKAAMILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQ 120 Query: 153 LDDDLYIKISKYNPNNTLQGIFIVDSRDTQT--HKIYYAQSGS---IDLDRQAIILNDGE 207 + + + + + +F+ R + A SG + Q + LN G Sbjct: 121 ATNGSSVLFIESVDGSNFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGT 180 Query: 208 VHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLET 267 + + +D I F+ Y + + ++ L N + Sbjct: 181 RFEGTALLRDFRITDFQDYQAIIGHQAVALDPNDTDQMDMRTLWNTD----------TTR 230 Query: 268 YRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH 327 R+E + R+T + L+ + RQ + +S+ + ++ F I Sbjct: 231 ARAELNWRITLIFNVFMMALMVVP--LSVVNPRQGR-----VLSMLPAMLLYLLFFLIQT 283 Query: 328 KIEQNPY---YIPILYLFLFCISSIFLLMIKKKY 358 ++ N P L+++ + + L ++ + Sbjct: 284 SLKSNGGKGKLDPTLWMWTVNLIYLVLAIVLNLW 317 >gi|327314112|ref|YP_004329549.1| permease [Prevotella denticola F0289] gi|326944181|gb|AEA20066.1| permease, YjgP/YjgQ family [Prevotella denticola F0289] Length = 645 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 90/208 (43%), Gaps = 4/208 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 ++ +++I R G F + +F+ + + + ++ + S+++L + Y+ + Sbjct: 5 IRKLDIFIARQFGMLFAGTFFISLFVLMMQFLWRYVDDLIGKGLSMDVLGQFFWYMSLMM 64 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P P + + ++ ++EL I + G S + + ++ +++L++ F +N Sbjct: 65 VPQALPLAILLSSLISYGNLGESSELTAIKSAGISLVQSFRGLIVISVLIACGSFYFQNN 124 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 + P + I QL + + E +F+ + + + K + L I + Sbjct: 125 VGPSAQKHIAQLLISMKQKSPELEIPEGIFYDGIPNTNLYVEKKDLKTGHLYNIMVYRMT 184 Query: 180 DT-QTHKIYYAQSGSIDLD--RQAIILN 204 D+ + I A SG + ++ ++LN Sbjct: 185 DSYEDQAIILADSGMLQSTAEKKHLVLN 212 >gi|325300373|ref|YP_004260290.1| permease YjgP/YjgQ family protein [Bacteroides salanitronis DSM 18170] gi|324319926|gb|ADY37817.1| permease YjgP/YjgQ family protein [Bacteroides salanitronis DSM 18170] Length = 636 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 96/246 (39%), Gaps = 21/246 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K +++IL+ F + +FI + + + ++ + +NIL + Y T+ Sbjct: 4 IKKLDIFILKSFLLLFAGTFFICLFIFMMQFLWRYVDELVGKGLEINILAQFFFYSGLTL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+ P + + ELL + G + ++ PV+ L + FI +N Sbjct: 64 IPISLPLAILLAALMTFGNFGERYELLSMKAAGIPLLRIMCPVILFCAFLGLMSFIFQNE 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 I P+ + + L + + E +F+ D I + + L+ + I + Sbjct: 124 IGPRAQKKLWTLLVSMKQKSPEVDIPEGVFYSEIDGYNIYVKHKDRETGMLKDVLIYNFS 183 Query: 180 DT-QTHKIYYAQSGSIDLDRQ----AIILNDGEV---------------HRKSPISKDIS 219 D + I +A+ G +++ + L +GE +R+ + + Sbjct: 184 DGFENAHIIWAEEGKLEMTADKKHLYLHLYNGEQFENLKSQSVISRNVPYRRESFKEKHT 243 Query: 220 IMKFKS 225 +++F S Sbjct: 244 LIQFDS 249 >gi|294782105|ref|ZP_06747431.1| permease, YjgP/YjgQ family [Fusobacterium sp. 1_1_41FAA] gi|294480746|gb|EFG28521.1| permease, YjgP/YjgQ family [Fusobacterium sp. 1_1_41FAA] Length = 363 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 61/366 (16%), Positives = 132/366 (36%), Gaps = 17/366 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K ++YI + + FLM+ + + + + Q + I ++ + L+P + Sbjct: 2 IKKLDIYISKYFIKYFLMNIIGFMGVFLLAQTFKIIKYINQGKLEGGEIFDYIVNLLPKM 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 P + ++ M N E++ + +G + +++ L +A ++S+F+F N Sbjct: 62 FVETAPLSVLLAGLITISIMASNLEIVSLKTSGIRFLRIVRAPLIIAFIISLFVFFVNNS 121 Query: 121 IEPKCRSTIK-QLSAKAQLALTFSYLEENLFFRLDDDLYIK----ISKYNPNNTLQGIFI 175 I K + I + +L +EN FF + D YI I++ I I Sbjct: 122 IYTKSLAKINFYRKGEIDASLRLPKTKENAFFINNTDGYIYLMGNINRETGEAEKIEIVI 181 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 D+ ++ +I AQSG D D + +L+ ++ + +Y + Sbjct: 182 YDTEISKPVEIITAQSGKYDKDNKKWLLSGVNIYNVETKKTITKV----AYDSDRFGEDP 237 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYR---PELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + + A + + + E Y +E KR + I I + Sbjct: 238 NNFIRAAAEDPRMLTIKELKKTIKEQKNIGEDTRIYLAELAKRYSFPFASFIVAFIGLSV 297 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIF 350 VR + + I + +G + S + N P + ++ I Sbjct: 298 --SSKYVRGGRTTLNLVICVVAGYGYYLV-SGAFEAMSLNGILNPFISSWIPNILYFIIG 354 Query: 351 LLMIKK 356 + + + Sbjct: 355 MYFMNR 360 >gi|71891828|ref|YP_277557.1| putative transmembrane protein, transport [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71795934|gb|AAZ40685.1| putative transmembrane protein, transport [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 373 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 61/365 (16%), Positives = 145/365 (39%), Gaps = 22/365 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F YIL+ I R+ L+ + + + ++++ ++LV S S+ ++ G +P Sbjct: 2 IFTKYILKEIFRNQLIILTLLFLVCFCQKLIKMLSLVIDSGISIYLIFLCLGLNMPESGK 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ PF + ++ + E++ + + + I+ + F + +++ I+ + + Sbjct: 62 LLIPFSVFLSVLVTFYRLHAHNEIIAMYSCAVDKYIFIRSIFFFSGIVATCTMINISWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS---R 179 P C S +L K + + L E F L I S N L+ +F+ + + Sbjct: 122 PYCSSYQSKLLYKIKENINLVILSEKKFQPLATKYLILFSDSIQGNKLKNVFLSKTNPDK 181 Query: 180 DTQTHKIYYAQSGSIDLDRQA---IILNDG---EVHRKSPISKDISIMKFKSYTLQTESA 233 D I + GS+ + IIL G E++ K + +D+ I F Y + Sbjct: 182 DNSMFIIITSDQGSVCRNPDGSRLIILKKGTYYEIYNKCELCQDVLITDFSQYQMLI--- 238 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 NS+ ++++ + R+E H RLT + + +I+ + Sbjct: 239 NSTIKTFYEKNESVDHMFMH-----QLWRSNKSEMRAELHWRLTLLVSIFLMPMITTLLI 293 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + + +F + +F+ F ++ PI+++++ + +++ Sbjct: 294 TVVSYNYLINLLVTVF-----LYIIFFIFHILLRSCVLLDNINPIVWMWVINSIYLSIVL 348 Query: 354 IKKKY 358 + + Sbjct: 349 LLNSW 353 >gi|294645356|ref|ZP_06723067.1| putative membrane protein [Bacteroides ovatus SD CC 2a] gi|292639294|gb|EFF57601.1| putative membrane protein [Bacteroides ovatus SD CC 2a] Length = 616 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 36/195 (18%), Positives = 84/195 (43%), Gaps = 4/195 (2%) Query: 14 RSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMET 73 F+ + +FI + + + ++ + ++++ + Y T++P+ P + + Sbjct: 1 MLFIGTFFICLFIFMMQFLWRYVDELVGKGLEMSVMAQFFFYSALTLVPVSLPLAVLLAS 60 Query: 74 TNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLS 133 + ELL + G S + +++P+ F L F +N++ P ++ + L Sbjct: 61 LITFGNFGERYELLAMKAAGISLLKIMRPLAFFVCGLVGVSFYFQNVVGPIAQAKLGTLI 120 Query: 134 AKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSRDT-QTHKIYYAQS 191 + + E +F+ D +K++K N L + I +D + +I YA S Sbjct: 121 LSMKQKSPELDIPEGVFYSEIKDYNLKVAKKNRKTGMLYDVLIYSMKDGFEKARIIYADS 180 Query: 192 GSID--LDRQAIILN 204 G ++ D+Q + L+ Sbjct: 181 GRLEMTADKQHLWLH 195 Score = 36.1 bits (82), Expect = 9.2, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 46/85 (54%), Gaps = 6/85 (7%) Query: 265 LETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSY 324 + +++E+HK++T L ++F I A ++R+ P+ +S+ + F +++ Sbjct: 350 IRKHKTEWHKKITISLSCLLFFFIG---APLGGIIRKGGLGMPVIVSV-LVFIIYYIIDN 405 Query: 325 IIHKIEQNPYYIPILYLFLFCISSI 349 +K+ ++ +I +++ ++ S++ Sbjct: 406 TGYKMARDGKWI--VWMGMWTSSAV 428 >gi|260592583|ref|ZP_05858041.1| putative permease [Prevotella veroralis F0319] gi|260535353|gb|EEX17970.1| putative permease [Prevotella veroralis F0319] Length = 644 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 89/208 (42%), Gaps = 4/208 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K +++I + G F + +F+ + + + ++ + S+ +L + Y+ + Sbjct: 4 IKKLDIFIAKQFGMLFAGTFFISLFVLMMQFLWRYVDDLIGKGLSMEVLGQFFWYMSLMM 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P P + + ++ ++EL I + G S I + ++ ++++++ F +N Sbjct: 64 VPQALPLAILLSSLIAYGNLGESSELTAIKSAGISLIQSFRGLIVISVIIAGASFYFQNN 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 I P + + QL + + E +F+ + + + + + L I + Sbjct: 124 IGPMAQKNMAQLLISMRHKSPELEIPEGVFYDGIPQTNLYVERKDMKSGHLYNIMVYRMT 183 Query: 180 DT-QTHKIYYAQSGSIDLD--RQAIILN 204 D+ + I A SG + ++ ++LN Sbjct: 184 DSYEDQAIILADSGMLQSTAEKKHLVLN 211 >gi|304383499|ref|ZP_07365959.1| conserved hypothetical protein [Prevotella marshii DSM 16973] gi|304335309|gb|EFM01579.1| conserved hypothetical protein [Prevotella marshii DSM 16973] Length = 634 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 41/208 (19%), Positives = 92/208 (44%), Gaps = 4/208 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K +++I + G F+ + + F+ + + + ++++ +L IL + Y+ + Sbjct: 4 IKKLDIFITKQFGLLFVGTFVICQFVLMMQFLWRWVDILIGKGLALEILAQFFWYMGLML 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P P + + V ++ ++EL I G S + + ++ L+ L++I F +N Sbjct: 64 VPQALPLAILLSSLIVFGNLGESSELTAIKAAGISLMQSFRSLILLSCLIAIGSFYFQNN 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 + P+ S + L + + E +F+ + + K N + L GI I Sbjct: 124 VGPEANSRLNVLIQSMRHKNPELEIPEGIFYDGIPQSNLYVQKKNRDTGVLYGIMIYRMT 183 Query: 180 DT-QTHKIYYAQSGSIDL--DRQAIILN 204 D+ + I A SG + DR+ ++L Sbjct: 184 DSYEDAAIILADSGRLQTTADRKHLLLT 211 >gi|260910242|ref|ZP_05916919.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str. F0295] gi|260635746|gb|EEX53759.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str. F0295] Length = 630 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 89/214 (41%), Gaps = 6/214 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K +++I + G FL + +F+ + + + ++ + ++ +L + ++ + Sbjct: 4 IKKLDIFICKQFGMLFLGTFFICLFVLMMQFLWRYVDELVGKGLTMEVLAQFFWWMALMM 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P P + + +++ ++EL I + G S ++ + L+S+ F+ +N Sbjct: 64 VPQALPLAILLSSLITFGNLSESSELTAIKSAGISLTRTFSSLVVVCSLISVTSFVFQNN 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 I P + QL + + E +F+ + I + K + GI I Sbjct: 124 IGPYSTIKLSQLLISMKQKSPELGIPEGVFYDGIPNSNIYVQKKDNQTGKFYGIMIYRMS 183 Query: 180 DT-QTHKIYYAQSGSIDLDRQA----IILNDGEV 208 ++ + +I A SG + + + L +GE Sbjct: 184 NSYEDSEIILADSGMLQTTAERKHLLLTLWNGEW 217 >gi|239809484|gb|ACS26210.1| unknown [uncultured bacterium] Length = 359 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 126/347 (36%), Gaps = 27/347 (7%) Query: 16 FLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTN 75 ++ I + ++ + + +LL I G+ +P L ++ P + Sbjct: 1 MSAVSAVLLVIIMSGRFIKYLAQAAQGLLDPGVLLLIMGFRLPGFLQLILPLGLFLGILL 60 Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAK 135 + +E+ ++ TG S+ L+ L A L+++ + + P+ + + ++ + Sbjct: 61 AYGRLYLESEMTVLSATGMSQRRLLVYSLAPAALVAVVVGWLSLGLAPQGIAEVDRILNQ 120 Query: 136 AQLALTFSYLEENLFFRLDDD-LYIKISKYNPN-NTLQGIFIVDS---RDTQTH---KIY 187 F L F L + + + + L G+FI ++ R T + Sbjct: 121 QDSLTEFDTLVPGRFQTLRGGSRVTYTRELSADRSELGGVFISETNVSRQTGKESGLSVL 180 Query: 188 YAQSGS--IDLDRQ-AIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAND 244 A+SG + D +IL +G + +P D +++ +Y + S + + Sbjct: 181 VAESGRQEVQPDGSRYLILENGYRYDGNPGQADYRAIQYDTYGVLLPKPEVSMELSEREA 240 Query: 245 QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKK 304 LL + +R+E R + L + ++++ A + RQ + Sbjct: 241 LPTRELLGSD----------NIRHRTELQWRFSLPLLVFVVTVLAVPLA--KVNPRQGRF 288 Query: 305 IHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + + L + + + IP + L L+ + +FL Sbjct: 289 LKLLPAIL--LYMTYLALLIAVRGALDKGR-IP-MALGLWWVHGLFL 331 >gi|315617675|gb|EFU98281.1| conserved hypothetical protein [Escherichia coli 3431] Length = 335 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 49/334 (14%), Positives = 120/334 (35%), Gaps = 25/334 (7%) Query: 33 LQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNT 92 ++ + S N++L + G +P + ++ P + L + +E+ ++ Sbjct: 1 MRILGAAVDSDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHAC 60 Query: 93 GTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFR 152 G S+ L+K + LA+ +I ++ P ++ A+A+ + L + F + Sbjct: 61 GLSKAVLVKAAMILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQ 120 Query: 153 LDDDLYIKISKYNPNNTLQGIFIVDSRDTQT--HKIYYAQSGS---IDLDRQAIILNDGE 207 + + + + + +F+ R + A SG + Q + LN G Sbjct: 121 ATNGSSVLFIESVDGSNFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGT 180 Query: 208 VHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLET 267 + + +D I F+ Y + + ++ L N + Sbjct: 181 RFEGTALLRDFRITDFQDYQAIIGHHAVALDPNDTDQMDMRTLWNTD----------TTR 230 Query: 268 YRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH 327 R+E + R+T + L+ + RQ + +S+ + ++ F I Sbjct: 231 ARAELNWRITLIFTVFMMALMVVP--LSVVNPRQGR-----VLSMLPAMLLYLLFFLIQT 283 Query: 328 KIEQNPY---YIPILYLFLFCISSIFLLMIKKKY 358 ++ N P L+++ + + L ++ + Sbjct: 284 SLKSNGGKGKLDPTLWMWTVNLIYLALAIVLNLW 317 >gi|45658408|ref|YP_002494.1| hypothetical protein LIC12569 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45601651|gb|AAS71131.1| conserved hypothetical protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 631 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 48/269 (17%), Positives = 88/269 (32%), Gaps = 34/269 (12%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + YILR I FL+S F + V+ + + I L LL GYL+ LP Sbjct: 131 ILDRYILREIFSPFLVSLAFFTMVYMVLALQKMIGLFVGKGVDPFRLLDYFGYLLANTLP 190 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M P M ++ ++E+ I + G S + L ++++ + + Sbjct: 191 MTIPMACLMSGIMAAGRLSGDSEITAIRSAGVSFPRIYINFLAFGFVMALLVGYLNFYLS 250 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFF-RLDDDL------YIKISKYNPN-NTLQGIF 174 P+ + + + + F DL + N N L+G+ Sbjct: 251 PENTRKMNEFNKWILAYNPLLAITPGQFSGDKTQDLFEKRARTMYTEGMNSNTGELKGVQ 310 Query: 175 IVD-------------------SRDTQTHKIYYAQSGSIDLD-------RQAIILNDGEV 208 I + ++ +I A G++ ++I L DG + Sbjct: 311 IREWEIFLEGNEYFHIGGKMIPMGGSRIIQIINAAKGNLVEKLGPDGEYEKSIRLKDGWI 370 Query: 209 HRKSPISKDISIMKFKSYTLQTESANSST 237 S K SI F++ + Sbjct: 371 LEWSDDRKTFSITDFRNGEMDYNIPKGKE 399 Score = 42.6 bits (99), Expect = 0.089, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 36/95 (37%), Gaps = 1/95 (1%) Query: 262 PELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWG 321 ++L + E H+R+ + +IF IS + + L I F F Sbjct: 494 KKVLTDFNVEIHRRIAMPISCLIFFFISFPLGLVVKRSGKGMSFTLAVVFLMIYFTFFTL 553 Query: 322 FSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 S I + + + P L + SI + MIK+ Sbjct: 554 GSTISYNDKIPDWIGPWSANILIALLSINI-MIKR 587 >gi|260174364|ref|ZP_05760776.1| hypothetical protein BacD2_21081 [Bacteroides sp. D2] Length = 616 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 36/195 (18%), Positives = 84/195 (43%), Gaps = 4/195 (2%) Query: 14 RSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMET 73 F+ + +FI + + + ++ + ++++ + Y T++P+ P + + Sbjct: 1 MLFIGTFFICLFIFMMQFLWRYVDELVGKGLEMSVMAQFFFYSALTLVPVSLPLAVLLAS 60 Query: 74 TNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLS 133 + ELL + G S + +++P+ F L F +N++ P ++ + L Sbjct: 61 LITFGNFGERYELLAMKAAGISLLKIMRPLAFFVCGLVGVSFYFQNVVGPIAQAKLGTLI 120 Query: 134 AKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSRDT-QTHKIYYAQS 191 + + E +F+ D +K++K N L + I + +D + I YA S Sbjct: 121 LSMKQKSPELDIPEGVFYSEIKDYNLKVAKKNRKTGMLYDVLIYNMKDGFENAHIIYADS 180 Query: 192 GSID--LDRQAIILN 204 G ++ D+Q + L+ Sbjct: 181 GRLEMTADKQHLWLH 195 Score = 36.1 bits (82), Expect = 9.3, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 46/85 (54%), Gaps = 6/85 (7%) Query: 265 LETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSY 324 + +++E+HK++T L ++F I A ++R+ P+ +S+ + F +++ Sbjct: 350 IRKHKTEWHKKITISLSCLLFFFIG---APLGGIIRKGGLGMPVIVSV-LVFIIYYIIDN 405 Query: 325 IIHKIEQNPYYIPILYLFLFCISSI 349 +K+ ++ +I +++ ++ S++ Sbjct: 406 TGYKMARDGKWI--VWMGMWTSSAV 428 >gi|67922983|ref|ZP_00516478.1| permease YjgP/YjgQ [Crocosphaera watsonii WH 8501] gi|67855202|gb|EAM50466.1| permease YjgP/YjgQ [Crocosphaera watsonii WH 8501] Length = 394 Score = 120 bits (301), Expect = 4e-25, Method: Composition-based stats. Identities = 45/346 (13%), Positives = 118/346 (34%), Gaps = 23/346 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPT 59 + + Y+ + FL + + + + V+ S L++ LK+ +P Sbjct: 20 LSIMDRYLFIELLLPFLFGMGIFTSLGLSIGSLFDLVRRVTESGLMLSVALKVLLLKLPG 79 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + + P + T ++ ++E++ + + G S LI PV+ +++ FI + Sbjct: 80 FVSLAFPMAMLLAALMAYTRLSSDSEIIALRSLGVSIYRLIIPVILFGFMVTGCAFIVND 139 Query: 120 IIEPKCRST----IKQLSAKAQLALTFSYL----------EENLFFRLDDDLYIKISKYN 165 I P +++ + + + E + L +YN Sbjct: 140 WIAPAATHEAAVTLERAVNQERPDFKERNIVYPEYKTIQEENGQEATVLSRL-FYAEEYN 198 Query: 166 PNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKS 225 +QG+ I+D ++I ++S + ++ +G ++ +P +I++F+ Sbjct: 199 GEQ-MQGLTILDRTQEGVNQIVTSESATWNISSNTWDFFNGTIYLIAPDGSYRNIVRFQH 257 Query: 226 YTLQTESANSSTIVLKAN--DQNLSFLLNPNPN-NPNYRPELLETYRSEFHKRLTQWLFP 282 L A + N + ++ + + + + ++ Sbjct: 258 QQLALPRAPLDLANRRQNFTEMTIAETKEYLKAMQLSGNEKRIRKVQVRLQEKYALPFVC 317 Query: 283 VIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHK 328 +IFGL+ + + + + + FG + Sbjct: 318 LIFGLVGAAIGVRPQNTNKSTSF---GVCVGLIFGYYLLAFMSTSL 360 >gi|194334630|ref|YP_002016490.1| permease YjgP/YjgQ family protein [Prosthecochloris aestuarii DSM 271] gi|194312448|gb|ACF46843.1| permease YjgP/YjgQ family protein [Prosthecochloris aestuarii DSM 271] Length = 387 Score = 120 bits (301), Expect = 4e-25, Method: Composition-based stats. Identities = 59/355 (16%), Positives = 134/355 (37%), Gaps = 25/355 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K + YI R G + + + L + + V+ +++ I+ ++ + + +P V Sbjct: 28 LKRIDTYIARQFGLTCIFASLSFLALFVVLDLIENIDRFIDNSVDIQHISLYYLSFLPEV 87 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 TP + + V ++ ++EL I + G S ++ P F+++++++F ++ Sbjct: 88 FLATTPIAVLLSSLYVTGRLSSSSELSAIFSAGLSLRRIMLPFAFVSLVITVFNIVNAGW 147 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIKISKYNPN-NTLQGIFIVDS 178 I P+ + + + E+ L+ D + I K PN + I + Sbjct: 148 ILPETTAYKNTFMREFLGKNSEHLFPESRIHILESRDRILSIGKLEPNTGQAEKITLETF 207 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILN---------DGEVHRKSPISKDISIMKFKSYTLQ 229 + + A+ + + D I+ D ++R P + + L Sbjct: 208 DGSTITQRIDAEKMNYNADLDRWIMTGTRNRTFLPDTTLYRYDPGN--------DTLKLS 259 Query: 230 TESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 +++ + L+ + N+ + L+T E H R+ + +I LI Sbjct: 260 LTASSLKELHLRPEEMNIVQHYRYIEEKKDAGFSNLQTAIIELHSRIALPITSLIIILIG 319 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFG-VFWGFSYIIHKIEQNPYYIPILYLFL 343 + R+++ I +SI G ++ IH I P+L +L Sbjct: 320 V-----PLSTRKKRSGLAIEAGISILIGFLYISLEKTIHAIGNGGMADPVLTAWL 369 >gi|187477637|ref|YP_785661.1| permease [Bordetella avium 197N] gi|115422223|emb|CAJ48747.1| putative permease [Bordetella avium 197N] Length = 372 Score = 120 bits (301), Expect = 4e-25, Method: Composition-based stats. Identities = 39/274 (14%), Positives = 108/274 (39%), Gaps = 14/274 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ ++ I + +V + + +++ + + T +++L ++ + T Sbjct: 1 MSLFKRSVVSEITSHAGVVFSTLVVVWLSVLLVRLLGEAAGGTIGADVVLGLAAFSTITA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP + + +T R +E+++ +G S ++PVL +AI +++ + + Sbjct: 61 LPTILAVSLFIAVLTTVTRNYRESEMVVWFASGLSLADWVRPVLRVAIPVALMVAGLTLV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISK--YNPNNTLQGIFIVDS 178 P I + + + S + F + ++ +P + L +F + Sbjct: 121 AAPWAYRQIGEYRERFEQRSDLSKVAAGQFAESGRGNRVFFAEDPVDPGDELGAVFAR-A 179 Query: 179 RDTQTHKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 D + + A+S ++ + ++L+ G + P + ++ + F+ Y ++ ES Sbjct: 180 IDPEWFSVLTAKSARGETLENGDRFLVLSKGHRYDLKPGTPEVRLTNFEEYGIRLESKGG 239 Query: 236 STI--------VLKANDQNLSFLLNPNPNNPNYR 261 + ++ + L+ N N+ + Sbjct: 240 EDPIASARAAAERSSKARSTTQLMEDNTNSSWSQ 273 >gi|319941842|ref|ZP_08016164.1| hypothetical protein HMPREF9464_01383 [Sutterella wadsworthensis 3_1_45B] gi|319804775|gb|EFW01642.1| hypothetical protein HMPREF9464_01383 [Sutterella wadsworthensis 3_1_45B] Length = 379 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 47/366 (12%), Positives = 135/366 (36%), Gaps = 25/366 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ ++ + + I + +++ +N+ + + ++++ Y LP Sbjct: 2 IFKRSLIAELANLAGAVFTVLFTIVLAVAMVRFLNMAAGGSIEHGTVVQLVLYNALVNLP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNT-GTSRITLIKPVLFLAILLSIFLFISENII 121 + + T L ++ E+++ ++ G S ++ I+P + A+ + + + + +I Sbjct: 62 PLLAASLFIATLMTLMRSWQDNEMVVWFSSGGRSILSWIEPTVKFALPIVVVIALLSIVI 121 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNN-TLQGIFIVDSR 179 P R+ +L + + F + ++ +F+ + Sbjct: 122 SPWARAETDRLRNSVSAREDVNAIAPGRFIEAMGGKRVFFVESAEEGGNQVRNVFMAEG- 180 Query: 180 DTQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 D + A+ G+I+++ + ++L +G + S I++F SY ++ + Sbjct: 181 DWGKESVVTAEKGTIEVNAEGDRYVVLGNGRRYEAQTDSGKTRIVEFGSYGVRLDIRIDR 240 Query: 237 TIV-LKANDQNLSFLL-NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 K + ++ L+ +P P+ +++E R + ++ L++I Sbjct: 241 AFASTKTSSMPIALLIASPTPD-----------HQAELLWRFSWPAAALLLALLAIP--L 287 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI--FLL 352 R + ++ + +L + +Q + Y L I +L Sbjct: 288 SCTSPRAGRSLNLLMAALVFILYLNALSIVETKIEQQALTFWSG-YTVLNGSLLILTVVL 346 Query: 353 MIKKKY 358 I++ + Sbjct: 347 FIRRTW 352 >gi|189345952|ref|YP_001942481.1| permease YjgP/YjgQ family protein [Chlorobium limicola DSM 245] gi|189340099|gb|ACD89502.1| permease YjgP/YjgQ family protein [Chlorobium limicola DSM 245] Length = 360 Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 116/358 (32%), Gaps = 11/358 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK +I R SFL + + + +I +++ ++ ++ ++ +P+ Sbjct: 1 MKLLYRHIFRQFMTSFLFASIAFAALFTLITMVENLDEFFDRGIGISGIVWYYLLALPST 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + ++ ++EL I + G L++P + +L+S ++ + Sbjct: 61 FQITAPVAALLASILTAGRLSASSELAAIRSAGVGMSQLMRPYVLGGLLISGINLLNASF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRL--DDDLYIKISKYNPNN-TLQGIFIVD 177 +EP + T S L E + ++ + I ++ + + + Sbjct: 121 LEPAAAKEKISFEKQVLNE-TRSGLHEGTNIHVIEPENRIVTIESFDAKHLQASKVTVEQ 179 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKF-KSYTLQTESANSS 236 ++ A D I+ + +IS + L + Sbjct: 180 FNGSRLISRKDASRMVFDPAIDRWIMQKAAIRSFGADPGEISFSTGNDTLNLLLSIQSLQ 239 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L+ + NL L+ R + H + L ++ I + Sbjct: 240 ELSLQPEEMNLMQHYRYVKEKMQAGFPGLDRARVKLHAKTALPLASLV---IIFIGVPLS 296 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ---NPYYIPILYLFLFCISSIFL 351 + ++ I I+L I F + P+ L + LF + L Sbjct: 297 TVKKRSGLAAEIAIALFIGFLFLGMQKTVASLGYNGIIEPWIAAWLPIILFLGAGALL 354 >gi|56479503|ref|YP_161092.1| hypothetical protein ebA7171 [Aromatoleum aromaticum EbN1] gi|56315546|emb|CAI10191.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1] Length = 359 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 51/364 (14%), Positives = 131/364 (35%), Gaps = 14/364 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y+ R I + M L + + + +++V L+ L LIP + Sbjct: 3 RVLTRYLAREIFGATAMVLLAFLGLFVFFDFINELDVVGKDGYELHHALIFVVMLIPGRV 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + T LT++ R++E+ ++ +G S +++ + + ++ + F+ + Sbjct: 63 YELLPVAVLIGTLYALTTLARHSEITVMRVSGMSTPAMLRALGGIGVIFVVLTFVIGEYV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNNTLQGIFIVDSRD 180 P +Q A + + L L+ + D L + + P+ +++ + I D Sbjct: 123 APPAEQAAQQWRLTATHSAVSNQLRSGLWVK--DGLRVVNVRTVLPDRSMEKVRIYDFDA 180 Query: 181 TQTHKIYY-AQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 A +G D +Q +L R D+ + ++ S ++ Sbjct: 181 QHALLSISEAATGRYDAAQQGWLLEGVRQTRFLGDHTDVVDLTELTWRSDLTPQVLSVLM 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + +++ L ++ + + Y K+L ++ +++ + Sbjct: 241 VVPERMSVTTLFA-YISHLRENRQNADRYEIALWKKLVYPFAALVMMALALPF----SFT 295 Query: 300 RQRKKIHPIFISLSISFGVFWG-----FSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R + + L + G+ + FS + P + LF ++ +L+ Sbjct: 296 HDRMGGVSMKVFLGVMLGIGFHLLNGLFSSLGVINSWQPALAALTPSALFLAAAAGMLVW 355 Query: 355 KKKY 358 ++ Sbjct: 356 VERR 359 >gi|313886927|ref|ZP_07820630.1| putative phage tail component, N-terminal domain protein [Porphyromonas asaccharolytica PR426713P-I] gi|332300780|ref|YP_004442701.1| permease YjgP/YjgQ family protein [Porphyromonas asaccharolytica DSM 20707] gi|312923624|gb|EFR34430.1| putative phage tail component, N-terminal domain protein [Porphyromonas asaccharolytica PR426713P-I] gi|332177843|gb|AEE13533.1| permease YjgP/YjgQ family protein [Porphyromonas asaccharolytica DSM 20707] Length = 678 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 44/202 (21%), Positives = 87/202 (43%), Gaps = 7/202 (3%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRI----NLVSSSTESLNILLKISGYLIPTVLP 62 YI + RSFL L + I W + ++Q + + + + +LL++ Y VLP Sbjct: 9 YIF--MVRSFLPLLLMTLLICWFVVLMQFLWQHVDDLVGKGMDVGVLLEVIFYAGLYVLP 66 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + + ++ ELL + + G ++KP++ L +++ LF+ + Sbjct: 67 TAVPLGVLLASLMTFGNLGERLELLAMKSAGVPLSKIMKPLVILVTCIALGLFVYLDRGV 126 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSRDT 181 K + Q+ A+ A + + +FF D I + + +TL + I D + Sbjct: 127 QKASVRVYQILFSARYARPELEIPKGIFFNGIDGYSIYVGDKDAATSTLYNVMIYDLSEQ 186 Query: 182 QTHKIYYAQSGSIDLDRQAIIL 203 T +I A +G + +D + L Sbjct: 187 HTPRIILADTGRLLMDESKLYL 208 Score = 38.0 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 24/139 (17%), Positives = 49/139 (35%), Gaps = 11/139 (7%) Query: 226 YTLQTESANSSTIV----LKANDQNLSFLLNPNPNNPNYRPELLETYRS---EFHKRLTQ 278 YTL + ++ K + L L + Y + YR E H++ T Sbjct: 368 YTLDSLMDRATDQDKLLGYKQALEWLESLSSSVQIADTYYDDAASDYRVNAQEMHRKFTF 427 Query: 279 WLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-PYYIP 337 + ++F V A A+VR+ P+ +++ I + ++ + I Sbjct: 428 PVACLLFF---FVGAPLGAIVRKGGVGTPMVLAVLIFIIYYVIDTFGLKMINSGQIPVWA 484 Query: 338 ILYLFLFCISSIFLLMIKK 356 ++L I + + K Sbjct: 485 GMWLSSAVILPLGAFLTYK 503 >gi|154491977|ref|ZP_02031603.1| hypothetical protein PARMER_01608 [Parabacteroides merdae ATCC 43184] gi|154088218|gb|EDN87263.1| hypothetical protein PARMER_01608 [Parabacteroides merdae ATCC 43184] Length = 655 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 37/216 (17%), Positives = 85/216 (39%), Gaps = 6/216 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K ++L+ FLM+ +FI + + + I+ + + +L ++ Y + Sbjct: 4 IKRLYTFMLQTFLPLFLMTFGICLFIVLMQFLWRYIDDMVGKGLGIPVLAEMFMYAALFL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +PM P + + ++ ELL + + G S + +++P++ ++SI F +N Sbjct: 64 VPMALPLAILLASLMTFGNLGERLELLAMKSAGVSLVHIMRPLIITISIISIGAFFFQNY 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 P + + L + + E +F+ + + + L+ + I D Sbjct: 124 AMPVVQVKLYTLLWSMRQKSPELDIPEGVFYSEITGFNVYVKHKDTETGLLRDMMIYDYS 183 Query: 180 DT-QTHKIYYAQSGSIDLDRQ----AIILNDGEVHR 210 + + A SG + + L +GE R Sbjct: 184 EGFNKVSVMVADSGRLKTSADKMFLVLSLFNGESFR 219 Score = 37.2 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 46/102 (45%), Gaps = 9/102 (8%) Query: 257 NPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISF 316 + YR + + +E+HK+ T ++F I A A++R+ P+ IS+ I F Sbjct: 384 DEAYR---VRRHLTEWHKKFTLSFACMVFFFIG---APLGAIIRKGGLGMPVVISV-ILF 436 Query: 317 GVFWGFSYIIHKIEQNPYY--IPILYLFLFCISSIFLLMIKK 356 ++ I K+ ++ + ++L ++ + + + K Sbjct: 437 IFYYIIDNIGFKMARDGVWEAWQGMWLSSAILAPLGIFLTYK 478 >gi|305667079|ref|YP_003863366.1| hypothetical protein FB2170_12551 [Maribacter sp. HTCC2170] gi|88708012|gb|EAR00250.1| hypothetical protein FB2170_12551 [Maribacter sp. HTCC2170] Length = 482 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 44/245 (17%), Positives = 89/245 (36%), Gaps = 16/245 (6%) Query: 24 VFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRN 83 +FI I I+ ++ + I+ K YL+P + V P + + ++ N Sbjct: 1 MFIFIFQTIWLFIDDLAGKGLDIIIIGKFLFYLMPNLTEKVLPLTVLLSSILTFGTLAEN 60 Query: 84 TELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFS 143 E + +G S + ++ + L F N + P I L Sbjct: 61 YEFAAMKASGISLQRAMLSLIVFIVFLGGVTFYFANSVIPASEQKIYNLRRNIAKVKPAV 120 Query: 144 YLEENLFFRLDD-DLYIKISKY--NPNNTLQGIFIVDSRDTQTHKIYY-AQSGSIDLDRQ 199 + E +F + D+ IK+ K + L+ + I T+ + A+SG + Sbjct: 121 AIVEGVFSDFEGADMNIKVDKKHGENDRFLENVTIHQKTKTKVNSTVIKAKSGELKSSET 180 Query: 200 ----AIILNDGEVHRKSPISKD-------ISIMKFKSYTLQTESANSSTIVLKA-NDQNL 247 ++L DG +R P S + F++YT+ + + + + + D+ Sbjct: 181 SDILQLVLYDGHYYRDLPKSSKKAKNKHPFAKADFETYTMNIDLSEFNNVDMDEVRDRET 240 Query: 248 SFLLN 252 + N Sbjct: 241 EKMKN 245 Score = 36.1 bits (82), Expect = 7.6, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 41/97 (42%), Gaps = 4/97 (4%) Query: 261 RPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFW 320 R E+ + HK+ L VI V A A++R+ P+ I++ + ++ Sbjct: 358 RYEIYNRHIISLHKKYALALSCVILF---FVGAPLGAIIRKGGIGLPMVIAIVLFLTYYF 414 Query: 321 GFSYIIHKIEQN-PYYIPILYLFLFCISSIFLLMIKK 356 + + ++N + I +L + + +++ K+ Sbjct: 415 IGVFAENYAKKNEIHPIIGAWLSTMIMLPLSIVLTKR 451 >gi|281423648|ref|ZP_06254561.1| putative permease [Prevotella oris F0302] gi|281402200|gb|EFB33031.1| putative permease [Prevotella oris F0302] Length = 637 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 86/207 (41%), Gaps = 4/207 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K +++I + G F+ + F+ + + + I+ + S+ I+ K Y+ + Sbjct: 9 IKKLDIFIAKQFGMLFVGTFFICQFVLMMQFLWRYIDDLIGKGLSMEIMAKFFWYMGLML 68 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P P + + ++ ++EL I G S + + ++ + + +S F+ +N Sbjct: 69 VPQALPLAILLSSLIAFGNLGESSELTAIKAAGISLMQAFRSLIVITLFVSGVSFVFQNN 128 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 I P+ + I QL + + E +F+ + + + + L GI I Sbjct: 129 IGPEANNKIAQLLMSMKQKSPELEIPEGIFYDGIPNSNLYVQHKDLKTGKLYGIMIYRMT 188 Query: 180 DT-QTHKIYYAQSGSIDLD--RQAIIL 203 + + I A SG + ++ ++L Sbjct: 189 GSYEDQAIILADSGMLQSTAEKKHLVL 215 >gi|39997021|ref|NP_952972.1| hypothetical protein GSU1923 [Geobacter sulfurreducens PCA] gi|39983909|gb|AAR35299.1| membrane protein, putative [Geobacter sulfurreducens PCA] gi|298506038|gb|ADI84761.1| membrane protein, YjgQ-related [Geobacter sulfurreducens KN400] Length = 358 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 62/365 (16%), Positives = 123/365 (33%), Gaps = 15/365 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI + + V I VI L++I + +++ +P + Sbjct: 1 MTILTRYIAGAYLKILGLCLASFVAIYLVIDFLEKIGRLLRFQPRWIDIIQYFICKLPEI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P M T L ++RN+E++ + G + P++ +A +S+ S Sbjct: 61 ITQVIPLAVLMSTLLTLGMLSRNSEIVAMRGCGVGLGRISAPLIVIAAAVSLLTIFSNEF 120 Query: 121 IEPKCRSTIKQLSAK-AQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDS 178 + P ++ + + T ++ +N + D+ + ++P L+GI + Sbjct: 121 VLPSSYRQMRYVDQVLIRKQGTNTFFRQNNIWHKDESAIMMARVFDPGRQALRGITLWRF 180 Query: 179 RDTQTHKI-YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 D A G+ D R V + + S + Sbjct: 181 SDGMRPVSRIDAAEGTWDGARWTFK----TVTVRGLAGPSVETRTLASLPAELNLKIEDL 236 Query: 238 IVLKANDQNLSFLLNPN-PNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V+ N+ F + Y ++ H +++ +I + I A + Sbjct: 237 KVVDKYADNMGFFKLRDYVRKLKAGGYDTTRYEAQMHSKISLPFASLIMAFLGIPFALRG 296 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF----LFCISSIFLL 352 R I S+ I F F S +I Q P++ + LF +S I+L Sbjct: 297 G--RSSGVALGITASIGIGFAYFITNSILIS-FGQTGILPPLISAWAANVLFALSGIWLA 353 Query: 353 MIKKK 357 M + Sbjct: 354 MTLDR 358 >gi|241668815|ref|ZP_04756393.1| hypothetical protein FphipA2_08605 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254877347|ref|ZP_05250057.1| permease [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254843368|gb|EET21782.1| permease [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 360 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 67/366 (18%), Positives = 134/366 (36%), Gaps = 28/366 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 E Y + I +F LFI+ I +++ S ++ ++K IP + Sbjct: 2 ILEKYYNKDIVNTFTSITLFIISIVSANLLIRLFQQAYSQGLGIDSIIKFVILTIPGNVS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + N E+ + G + + ++K + L+I F++ I Sbjct: 62 LVAPIAIFLAIVICFGKYFANNEMFVTLAGGVTWMQIVKNTMKPVYALTIITFLTVMYIN 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT- 181 P + T A S + ++ + D I I + NTL+ +F+ + D Sbjct: 122 PLSKQTQDIYQASLTAKALLSSITDDKIIKTTDGKVIYIKSKS-GNTLKDVFLYMATDNS 180 Query: 182 QTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +K+ A + D+ A + +D ++ K P + YT T TI Sbjct: 181 DEYKVVTAPVAEVITDKGAAYVDFHDAHIYTKEPKT--------SEYTYDTAKNAIYTI- 231 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETY---------RSEFHKRLTQWLFPVIFGLISI 290 +D++ N + + Y L+E + R EF R+ + ++ L+++ Sbjct: 232 FDTSDRD----YNHDKVDRLYMHTLIENFTDKDDGTVSRGEFFGRINNSISVIVASLLAL 287 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 R + K+ P + L++ F + + P +I L+L Sbjct: 288 ALCRLRPRQNKYAKLLPSVVVLAVYLCSNM-FVNTLMTGGKLPVWIG-LWLPHIFFIIYA 345 Query: 351 LLMIKK 356 + I+K Sbjct: 346 IRTIRK 351 >gi|24213806|ref|NP_711287.1| hypothetical protein LA_1106 [Leptospira interrogans serovar Lai str. 56601] gi|24194638|gb|AAN48305.1| hypothetical protein LA_1106 [Leptospira interrogans serovar Lai str. 56601] Length = 631 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 48/269 (17%), Positives = 88/269 (32%), Gaps = 34/269 (12%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + YILR I FL+S F + V+ + + I L LL GYL+ LP Sbjct: 131 ILDRYILREIFSPFLVSLAFFTMVYMVLALQKMIGLFVGKGVDPFRLLDYFGYLLANTLP 190 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M P M ++ ++E+ I + G S + L ++++ + + Sbjct: 191 MTIPMACLMSGIMAAGRLSGDSEITAIRSAGVSFPRIYINFLAFGFVMALLVGYLNFYLS 250 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFF-RLDDDL------YIKISKYNPN-NTLQGIF 174 P+ + + + + F DL + N N L+G+ Sbjct: 251 PENTRKMNEFNKWILAYNPLLAITPGQFSGDKTQDLFEKRARTMYTEGMNSNTGELKGVQ 310 Query: 175 IVD-------------------SRDTQTHKIYYAQSGSIDLD-------RQAIILNDGEV 208 I + ++ +I A G++ ++I L DG + Sbjct: 311 IREWEIFLEGNEYFHIGGKMIPMGGSRIIQIINAAKGNLVEKLGPDGEYEKSIRLKDGWI 370 Query: 209 HRKSPISKDISIMKFKSYTLQTESANSST 237 S K SI F++ + Sbjct: 371 LEWSDDRKTFSITDFRNGEMDYNIPKGKE 399 Score = 42.6 bits (99), Expect = 0.10, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 36/95 (37%), Gaps = 1/95 (1%) Query: 262 PELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWG 321 ++L + E H+R+ + +IF IS + + L I F F Sbjct: 494 KKVLTDFNVEIHRRIAMPISCLIFFFISFPLGLVVKRSGKGMSFTLAVVFLMIYFTFFTL 553 Query: 322 FSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 S I + + + P L + SI + MIK+ Sbjct: 554 GSTISYNDKIPDWIGPWSANILIALLSINI-MIKR 587 >gi|284929068|ref|YP_003421590.1| putative permease [cyanobacterium UCYN-A] gi|284809527|gb|ADB95232.1| predicted permease [cyanobacterium UCYN-A] Length = 402 Score = 119 bits (299), Expect = 7e-25, Method: Composition-based stats. Identities = 46/357 (12%), Positives = 123/357 (34%), Gaps = 20/357 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YIL + S + + + + N V S L L+I IP Sbjct: 31 LIDRYILSQLIGPLAFSVGLVSILGVAIGYLSDLSNKVVESDLPLIQALEIIFLKIPEFT 90 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + T ++ ++EL+ + G S L+ P ++++++ FI +I Sbjct: 91 AYALPISMMLSTLLTYGRLSGDSELIALRVCGASLYRLVMPAFIISLIMTGITFIFSELI 150 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLY------------IKISKYNPNNT 169 P + + + + +++F+ + + + ++ Sbjct: 151 VPAANYRVTSILVEHLQEERPYWQNKDIFYPDYEKVVLPDGSTEKQLKHLFFAEKFDGQK 210 Query: 170 LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKS--YT 227 L+ + +++ + + ++I + S + + + +G +++ +P S FK Sbjct: 211 LETLTVLEWLEKKLNRIVVSDSAAWNAQDETWDFFNGTIYQLAPDSSYQGTYSFKHRQLP 270 Query: 228 LQTESANSSTIVLKANDQNLSFLLN-PNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFG 286 L + + N+ + L T++ +++ ++FG Sbjct: 271 LAKSAFEFIQEGRDPYEMNIFQAQKYMKILRVMEDEQKLRTFQVRVQQKIAFPFICIVFG 330 Query: 287 LISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 +I + + +S+ I F +++ ++I + P + +L Sbjct: 331 VIGSALGTSPQYI---NRAMGFGLSVVIVF-IYYLLGFLIGSLGLIGVVSPFMAAWL 383 >gi|254446878|ref|ZP_05060353.1| putative permease, YjgP/YjgQ family [Verrucomicrobiae bacterium DG1235] gi|198256303|gb|EDY80612.1| putative permease, YjgP/YjgQ family [Verrucomicrobiae bacterium DG1235] Length = 370 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 53/369 (14%), Positives = 126/369 (34%), Gaps = 17/369 (4%) Query: 5 ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 + Y+ ++F + + + + +I + S + +L L P+ L + Sbjct: 6 DRYVFTEWLKAFALVLSSMFGLLILFEIQDSFTDLVSYDATGGQILFYYAILAPSFLTVT 65 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P + L ++R E + + G S + + + ++L+S L+ + + P Sbjct: 66 LPASILVSILYALGQLHRANEFVALRAAGMSVFRVTRSIWLASLLISGGLWYLNSSLIPW 125 Query: 125 CRSTIKQLSAKAQLALTFSYL-------EENL-FFRLDDDLYIKISKYNP-NNTLQGIFI 175 QL + L E L F ++ I++Y+ + GI + Sbjct: 126 SVEQSNQLITTLRQDSEAKILDSDEIGVVEGLAFDNRRENRMWFINRYSEYKSQAFGISV 185 Query: 176 VDSRDTQTH-KIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + + + A+ G D D L DG P + F+ + + + Sbjct: 186 SIMDEERREVRRVMARYGYFDEDLGYWTLFDGRERLNDPDTGRERWPPFERLDAKDLTDD 245 Query: 235 SSTIVL---KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 + ++L + D + L + + Y + +I I+I Sbjct: 246 PTLMLLFGKRPKDLSFFQLRRITDSFTQEDNPNVLAYEVRLQALMASAASCLIVAGIAIP 305 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 A + + S+ + F VF+ F+ +++ + P + ++ ++ I L Sbjct: 306 FAVSGV---RTNPAVGVTKSIGL-FFVFYIFTSVLNAFGREGALSPEMAAWIPMVAMILL 361 Query: 352 LMIKKKYTK 360 + + + Sbjct: 362 AYVLMRRVR 370 >gi|300728391|ref|ZP_07061753.1| permease, YjgP/YjgQ family [Prevotella bryantii B14] gi|299774310|gb|EFI70940.1| permease, YjgP/YjgQ family [Prevotella bryantii B14] Length = 631 Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 84/207 (40%), Gaps = 4/207 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K ++++ + G F + F+ + + + ++ + + L + Y+ + Sbjct: 4 IKKLDIFLAKQFGLLFAGTFFICQFVLMMQFLWRYVDDLIGKGIPMTALAQFFWYMGLMM 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P P + + L ++ ++EL I G S + ++ ++ + ++ + F EN Sbjct: 64 VPQALPLAILLSSLITLGNLGESSELTAIKAAGISLLQALRSLIVITCIIMMASFYFENN 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 + P + QL + + E +F+ + I + K + + L GI I Sbjct: 124 LGPDANMKLSQLLISMKQKSPELEIPEGVFYDGIPNSNIYVQKKDLKSGKLYGIMIYRMT 183 Query: 180 DT-QTHKIYYAQSGSIDLD--RQAIIL 203 + + I A SG + ++ +IL Sbjct: 184 QSYEDAAIILADSGMMQSTAEKKHLIL 210 >gi|299141277|ref|ZP_07034414.1| permease [Prevotella oris C735] gi|298577237|gb|EFI49106.1| permease [Prevotella oris C735] Length = 632 Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 83/205 (40%), Gaps = 2/205 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K +++I + G F+ + F+ + + + I+ + S+ I+ K Y+ + Sbjct: 4 IKKLDIFIAKQFGMLFVGTFFICQFVLMMQFLWRYIDDLIGKGLSMEIMAKFFWYMGLML 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P P + + ++ ++EL I G S + + ++ + + +S F+ +N Sbjct: 64 VPQALPLAILLSSLIAFGNLGESSELTAIKAAGISLMQAFRSLIVITLFVSGVSFVFQNN 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 I P+ + I QL + + E +F+ + + + + L GI I Sbjct: 124 IGPEANNKIAQLLMSMKQKSPELEIPEGIFYDGIPNSNLYVQHKDLKTGKLYGIMIYRMT 183 Query: 180 DT-QTHKIYYAQSGSIDLDRQAIIL 203 + + I A SG + + L Sbjct: 184 GSYEDQAIILADSGMLQSTAEKKHL 208 >gi|328948914|ref|YP_004366251.1| permease YjgP/YjgQ family protein [Treponema succinifaciens DSM 2489] gi|328449238|gb|AEB14954.1| permease YjgP/YjgQ family protein [Treponema succinifaciens DSM 2489] Length = 447 Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats. Identities = 60/345 (17%), Positives = 124/345 (35%), Gaps = 16/345 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 YI + + FL+ +F + +V QIL + +N +LK+ Y +P V+ Sbjct: 81 NILVRYIAKELLLYFLICFVFFFVVFFVNQILLLAETILKKRVPINSVLKLILYCLPNVI 140 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PF + L + + E+LI +G ++K VL + +L+S+F FI + Sbjct: 141 SQSAPFATLVGFLMCLGRLVTDNEILIFRASGQRYSLILKSVLAMGLLISVFSFIMNDYF 200 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P +L + ++ LE + +D + I + NN I + DS Sbjct: 201 LPIGTLKYNRLFKQIIVSNPAIELESKS-IKRMNDSTLVIGNVSKNNV-SDIVLFDSEKD 258 Query: 182 QTHKIYYAQSGSIDLDRQ-----AIILNDGEVHRKSP-ISKDISIMKFKSYTLQTESAN- 234 +I A + + + +N V +++ + + L + Sbjct: 259 GVQRIIMAGNSDVKKSSTPGVIMQLDMNSPIVLSLDKSKTENYESISAEKLRLNIFEDSI 318 Query: 235 -SSTIVLKANDQNLSFLLNP---NPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 SS+ + L+ + + L T+ E +K+ + F L++ Sbjct: 319 ISSSNGTSPREMTSWDLIKRIKKMKQENSSTKKRLNTFILECNKKFSVPFGSFFFALLAF 378 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY 335 A ++ + + + +S ++W + I Y Sbjct: 379 PLALI--FGKKDGQTLGLIFGIILSV-LYWSATIIGQMFGIRGGY 420 >gi|257465009|ref|ZP_05629380.1| hypothetical protein AM202_00770 [Actinobacillus minor 202] gi|257450669|gb|EEV24712.1| hypothetical protein AM202_00770 [Actinobacillus minor 202] Length = 309 Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats. Identities = 43/300 (14%), Positives = 91/300 (30%), Gaps = 19/300 (6%) Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + ++ P + L +E+ ++ G + L K LFL+I + + Sbjct: 1 MAQLMLPLSLFIALLLTLGRFYAESEITVMRACGIGQGLLAKVALFLSIFTTALAVYNVF 60 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIV-- 176 + P + +L A+A+ FS L F + I N N L I++ Sbjct: 61 WLTPWSINKQSELLAEAKANPRFSALSAGQFMT-AGGYVLFIDNINYDQNKLNDIYVFQP 119 Query: 177 DSRDTQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 D + + A SG + Q + L + + + D I F++YT Sbjct: 120 DQQKKNRPSVIVADSGELKGLPNGDQILTLENSTRYEGTAKVADFRISHFENYTAYLGHQ 179 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + + L+ + E ++E R + L+++ Sbjct: 180 DVDSDEK---------LVQRADWAKLVADKSPEA-QAELQWRFALIFATPLMALLAVP-- 227 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 RQ + + L + ++ + + ++M Sbjct: 228 MSSVNPRQGRFAKLLPALLLYLIYFLLQSTLKSSGASGKLDPTILMPVVSVAFLILGIVM 287 >gi|307129163|ref|YP_003881179.1| hypothetical protein Dda3937_01299 [Dickeya dadantii 3937] gi|306526692|gb|ADM96622.1| conserved inner membrane protein [Dickeya dadantii 3937] Length = 372 Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats. Identities = 51/357 (14%), Positives = 129/357 (36%), Gaps = 22/357 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETFKSQVAILFILLLIFFCQKLVRILGAAVDGDIPTNLVLSLLGLGVPAMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ G S+ L+K L L++L + F + + Sbjct: 62 LILPLSLFLGLLMTFGRLYAESEITVMHACGLSKGVLLKAALLLSLLTASFAAANVLWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RD 180 P ++ A+A+ + L E F + D + + + +F+ R+ Sbjct: 122 PWSSRHQDEVLAEARANPGMASLAEGQFQQTQDGNSVLFVGKANGSDFERVFLAQLHPRE 181 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A G++ Q + L+ G + + + +D I F Y + Sbjct: 182 NTRPSVVVADRGTVTARGDGSQVVTLSKGTRYEGTAMLRDFRITDFIDYQAIIGYQPVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L + R+EFH RLT L ++ ++ + Sbjct: 242 DPNNVDQMDMQTLWRSSD----------IAARAEFHWRLTLILSVLVMAIMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RQ + +S+ + ++ F + + N + L ++++ + Sbjct: 290 NPRQGR-----VLSMLPAMLLYLVFFLLQSSLRSNAGKGKLDPLVWMWLTNLGYFAL 341 >gi|238785038|ref|ZP_04629035.1| Inner membrane protein yjgP [Yersinia bercovieri ATCC 43970] gi|238714079|gb|EEQ06094.1| Inner membrane protein yjgP [Yersinia bercovieri ATCC 43970] Length = 364 Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats. Identities = 59/365 (16%), Positives = 127/365 (34%), Gaps = 27/365 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFSQKLVRILGAAVDGEIPTNLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G + +LI L LA+ S ++ + Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGMGKKSLILAALILALGTSALAAVNTIWLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLY-IKISKYNPNNTLQGIFIVDSRDT 181 P ++ A+ + + L F D + I +F+ R Sbjct: 122 PWSSKHQDEVLNDARANPSLAALAGGQFKSSTDGNSALFIGNVT-GKEFNRVFLAQLRPN 180 Query: 182 QT--HKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + A SG + Q +ILN G + + + +D I F Y Sbjct: 181 GNQRPSVVVADSGHMTERPDGSQVVILNKGTRYEGTALLRDFRITDFVDYQAIIGHQEVQ 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 A + L N + R+EFH RLT + VI L+ + Sbjct: 241 QNSNVAEQMTMKQLWRSNEADA----------RAEFHWRLTLIVSVVIMALLVVP--LSV 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFLFCISSIFLLM 353 RQ + +S+ + ++ F + + N P+L+++ + + + Sbjct: 289 VNPRQGR-----VLSMLPAMLLYLIFFLLQSSLRSNAGNGKLDPLLWMWTVNGVYLAIAV 343 Query: 354 IKKKY 358 I + Sbjct: 344 ILNLW 348 >gi|119471262|ref|ZP_01613765.1| hypothetical protein ATW7_11360 [Alteromonadales bacterium TW-7] gi|119445728|gb|EAW27011.1| hypothetical protein ATW7_11360 [Alteromonadales bacterium TW-7] Length = 354 Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats. Identities = 54/356 (15%), Positives = 134/356 (37%), Gaps = 3/356 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ + Y+ R I ++ + L +V I+ +I+ ++++ V + L + + Y IP Sbjct: 1 MKTLDWYLGRSILQTTGFALLVLVGISTLIKFIEQLKSVGRGSYDLITAMLYTLYSIPGD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L ++ N+EL+++ G SR+ +I V+ A+ ++I + Sbjct: 61 LVVFFPMAALIGGLTGLGALASNSELVVMQAAGMSRLQIIGSVMKTAMFMAICMMALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + K++ +A ++ ++ + ++ +I I + + L G+ + D Sbjct: 121 GAPEAQLRAKEMRNQAIHGGDVFSAQKGVWAKDGNN-FINIEDVDESGKLNGLHMYYF-D 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + ++ + +L D + + + Y Q + + + Sbjct: 179 SSLELTQITKAKEAISRKDGWLLRDVNKVIITDELITTELHPEEFYPSQLTAEKLGVVSV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K + + L + + + TY ++ Q + + L+++ Sbjct: 239 KPESLSFTGLWS-YLSYLEQNEQDTSTYDLALWRKFMQPVSVAVMLLVALSFIFGPLRTV 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + I F + + + Q P I + + I LM K+ Sbjct: 298 TMGARIIMGVVTGIVFHLTNEIFGPVVMVYQIPAIIGAVLPSVIFIGFATYLMNKR 353 >gi|312129693|ref|YP_003997033.1| permease yjgp/yjgq family protein [Leadbetterella byssophila DSM 17132] gi|311906239|gb|ADQ16680.1| permease YjgP/YjgQ family protein [Leadbetterella byssophila DSM 17132] Length = 453 Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats. Identities = 41/235 (17%), Positives = 89/235 (37%), Gaps = 8/235 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + ++ F+++ +VFI + ++ + + K+ Y Sbjct: 1 MKKIDKLFVKSYIGPFVLTTAIVVFIFLMRFLMIYFPEFIGKNLDMMVFAKLFFYFTMMT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +PM P + T ++ +EL + + G LI P + L+I ++IF N Sbjct: 61 IPMSLPLATLLATLMCFGNLGEKSELTAMKSAGIPITRLIVPTMILSIFVAIFSIGYNNT 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVD-S 178 + P L + ++E +F+ IK+ K + +L+ + + D + Sbjct: 121 VNPWANLKGWSLLYDIKTTKPALNIQEGIFYNQIPGYRIKVEKKVGDGQSLKNVIVYDHN 180 Query: 179 RDTQTHKIYYAQSGSI--DLDRQAII--LNDGEVHRKSPISKDISIMKFKSYTLQ 229 + I A SG + ++ L +G + + +++ M Y+ Q Sbjct: 181 TGSGNKNITVADSGRMYTINKESQLVFELYNGVNYSEGSSYNNMAQMT--RYSFQ 233 >gi|298372198|ref|ZP_06982188.1| permease [Bacteroidetes oral taxon 274 str. F0058] gi|298275102|gb|EFI16653.1| permease [Bacteroidetes oral taxon 274 str. F0058] Length = 490 Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats. Identities = 36/228 (15%), Positives = 80/228 (35%), Gaps = 10/228 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K +LY+LR +++ +F+ + I R++ + + + K Y Sbjct: 4 IKKLDLYVLRQFMTLLVVTFFISLFVIVMQFIWLRLDDMMGKGIPIETMAKFFFYSSLAF 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 PM P + + +M EL+ + G S +++ ++ ++ I F N Sbjct: 64 TPMALPLAILLASLMTFGNMGERFELIAMKTAGISLFRIMRSLMIFIAMIVIGAFFYSNY 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSR 179 + P + + L + + F+ + I + + + + I D Sbjct: 124 VIPMAQKRMWTLVYSFKDKALEIEIPVGEFYTGIRGVNIYARGRDTDKKAMTNVMIYDFT 183 Query: 180 DT-QTHKIYYAQSGSIDLDRQ----AIILNDGE----VHRKSPISKDI 218 Q+ + A + I I + +GE V ++ S I Sbjct: 184 KGFQSASVTAADTVRISTTEDKKYLKIDMKNGECFENVQQQQVGSNTI 231 >gi|288929933|ref|ZP_06423775.1| putative permease [Prevotella sp. oral taxon 317 str. F0108] gi|288328752|gb|EFC67341.1| putative permease [Prevotella sp. oral taxon 317 str. F0108] Length = 630 Score = 118 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 87/214 (40%), Gaps = 6/214 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K +++I + G FL + +F+ + + + ++ + ++ +L + ++ + Sbjct: 4 IKKLDIFICKQFGMLFLGTFFICLFVLMMQFLWRYVDELVGKGLTIEVLAQFFWWMGLMM 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P P + + ++ ++EL I + G S ++ ++ +S F+ +N Sbjct: 64 VPQALPLAILLSSLITFGNLGESSELTAIKSAGISLTRTFSSLVVVSCFISATSFVFQNN 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 I P + QL + + E +F+ + I + K + GI I Sbjct: 124 IGPYSTIKLSQLLVSMKQKNPELEIPEGVFYDGIPNSNIYVQKKDVKTGKFYGIMIYRMS 183 Query: 180 DT-QTHKIYYAQSGSIDLDRQA----IILNDGEV 208 ++ + +I A SG + + + L +GE Sbjct: 184 NSYEDSEIILADSGMLQTTAEKQHLLLTLWNGEW 217 >gi|325954392|ref|YP_004238052.1| permease YjgP/YjgQ family protein [Weeksella virosa DSM 16922] gi|323437010|gb|ADX67474.1| permease YjgP/YjgQ family protein [Weeksella virosa DSM 16922] Length = 500 Score = 118 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 47/272 (17%), Positives = 92/272 (33%), Gaps = 30/272 (11%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K + Y+L+ F + FI V Q ++ + ++ Y+ V Sbjct: 2 IKKLDGYVLKTFIGPFFFIFSILFFIFIVQFAWQEMDKYVGKGLDWLTIGELIFYMGINV 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V P + + EL + +G S + ++ V L LLSI L+ + Sbjct: 62 IQLVLPLTILLGSIMTFGGFGERYELAAMKASGLSLVRILSSVFVLVALLSIGLYHFGDK 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT--LQGIFIV-- 176 + P + +Q+ A + E +F +K+++ + +N+ L IFI Sbjct: 122 MMPYSQRKARQIMFSVIEAKPTLQITEGVFSNNIPGFSMKVNRVDGDNSEKLTDIFIHQQ 181 Query: 177 -----------DSRDTQTHKIYYAQSGSIDLDRQA-----IILNDGEVHRKSPISKDI-- 218 D Q A+ G + +D+ + L DG + + +K Sbjct: 182 LSKTVLDENGNDINIEQDPLTIIAEKGILQVDKHNPRFLKLELFDGISYTEPLKNKSYEQ 241 Query: 219 ------SIMKFKS--YTLQTESANSSTIVLKA 242 KF S Y + + Sbjct: 242 RKRQENQTTKFDSLHYFIDISAIVDKQTQQDP 273 >gi|288800724|ref|ZP_06406181.1| putative permease [Prevotella sp. oral taxon 299 str. F0039] gi|288332185|gb|EFC70666.1| putative permease [Prevotella sp. oral taxon 299 str. F0039] Length = 636 Score = 118 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 88/207 (42%), Gaps = 4/207 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K +++I++ G F+ + F+ + + + I+ + ++++L + Y+ + Sbjct: 4 IKKLDIFIVKQFGLLFIGTFFICQFVLMMQFLWRYIDDLIGKGLTIDVLAQFFWYMGLML 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P P + + ++ ++EL I G S + + ++ + IL++ F +N Sbjct: 64 VPQALPLAILLSSLIAYGNLGESSELTAIKAAGISLMQSCRGLIVITILIAFSSFYFQNN 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 I P + QL + + + +F+ + I + K + L GI I Sbjct: 124 IGPTANLKLAQLILSMRDKSPETQIPVGVFYDGIPNSNIYVQKKDNETGKLYGIMIYRMT 183 Query: 180 DT-QTHKIYYAQSGSIDL--DRQAIIL 203 + + I A SG + DR+ ++L Sbjct: 184 GSYEDQAIILADSGMLQSTADRKHLLL 210 >gi|225012841|ref|ZP_03703274.1| permease YjgP/YjgQ family protein [Flavobacteria bacterium MS024-2A] gi|225002963|gb|EEG40940.1| permease YjgP/YjgQ family protein [Flavobacteria bacterium MS024-2A] Length = 357 Score = 118 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 59/361 (16%), Positives = 127/361 (35%), Gaps = 8/361 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK +LYI++ +F + L + I ++ + ++I+ ++ Sbjct: 1 MKLIDLYIIKRYIGTFTVMILLFIPIGIMVDVAEKIDKFKEKEVPFGAIIDYYIDFTWYF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + + + NTE++ I ++G S ++P L A ++IF F + + Sbjct: 61 ANLLFPIFLFLSVIWFTSKLANNTEVIAILSSGISFFRYLRPFLLAATFIAIFAFFAGML 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSR 179 I PK K + +F +++++ +I ++ Y+P + Sbjct: 121 IVPKSNLGFNDFRYKYIIKKEARNTT-KVFQQINENEFIYVNSYDPIRKRATNFTLEHFE 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + D L++ S+ + K E + + + Sbjct: 180 GNKLKFKIKSNRIRWVEDDSVFRLSNYSKRTFLGDSEHFESIARKDTLFDFEIEDLAPVN 239 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 A S L + L ++ HKR + + I +I++ + Sbjct: 240 YIAETLTFSELNQFIEDEKERGSMLTNSHLLVRHKRWSIPISAFILTIIAVAV---SSFK 296 Query: 300 RQRKKIHPIFISLSISFGVFW---GFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R+ + +S+ F + F ++ K P L L LF I + FLL K Sbjct: 297 RRGGMGVNLAFGISLGFLFIFFDKIFGVLVSKSTFPPVVAAWLPLVLFGILAFFLLRYAK 356 Query: 357 K 357 + Sbjct: 357 R 357 >gi|242240955|ref|YP_002989136.1| permease YjgP/YjgQ family protein [Dickeya dadantii Ech703] gi|242133012|gb|ACS87314.1| permease YjgP/YjgQ family protein [Dickeya dadantii Ech703] Length = 366 Score = 118 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 55/350 (15%), Positives = 130/350 (37%), Gaps = 27/350 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETFKSQVAILFILLLIFFCQKLVRILGAAVDGEIPTNLVLSLLGLGVPQMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ G + L+K L LA+L + ++ + Sbjct: 62 LILPLSLFLGLLMTYGKLYAESEITVMHACGLGKSVLLKASLLLAVLTVLLAMVNVLWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RD 180 P ++ A+A+ + + E F + D + + IF+ R+ Sbjct: 122 PWSSRHQDEVLAEARANPGVASMVEGQFQQTQDGNSVLFVGNVSGQDFERIFMAQLHPRE 181 Query: 181 TQTHKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A G I + Q + LN G + + + +D I F +Y + + Sbjct: 182 NTRPSVVVADRGHIVARNDGAQIVTLNKGVRYEGTAMLRDFRITDFVNYQAVMGHQDVAI 241 Query: 238 IVLKANDQNLSFLL-NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 ++ L +P+ R+EFH RLT L +I ++ + Sbjct: 242 DPTNVEQMDMKTLWSSPDIA-----------ARAEFHWRLTLVLSVLIMAVMVVP--LSV 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFL 343 RQ + +S+ + ++ F + + N P+++++L Sbjct: 289 INPRQGR-----VLSMLPAMLLYLVFFLLQSSLRSNASKGKLDPLMWMWL 333 >gi|254882243|ref|ZP_05254953.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|319643195|ref|ZP_07997823.1| hypothetical protein HMPREF9011_03424 [Bacteroides sp. 3_1_40A] gi|254835036|gb|EET15345.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|317385099|gb|EFV66050.1| hypothetical protein HMPREF9011_03424 [Bacteroides sp. 3_1_40A] Length = 632 Score = 118 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 87/213 (40%), Gaps = 6/213 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K +++IL+ F+ + +FI + + + ++ + +++L + Y T+ Sbjct: 4 IKKLDIFILKSFLMLFIGTFFICLFIFMMQFLWRYVDELVGKGLEMSVLAQFFFYSALTL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+ P + + ELL + G + +I+P++ L F +N+ Sbjct: 64 IPLSLPLAILLAALMTFGNFGERYELLSMKAAGIPLLRIIRPLIIFCTFLCCTSFYFQNV 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 I PK + + L + + E +F+ + I + + + L+ + I + Sbjct: 124 IAPKAQIKLLTLLVSMKQTSPELDIPEGVFYDEIEGYNIYVKQKDRETGMLKDVLIYNFS 183 Query: 180 DT-QTHKIYYAQSGSIDLDRQ----AIILNDGE 207 D + I +A G +++ + L +GE Sbjct: 184 DGFENAHIIWASEGKMEMTADKQHLYLHLYNGE 216 Score = 39.6 bits (91), Expect = 0.75, Method: Composition-based stats. Identities = 22/136 (16%), Positives = 50/136 (36%), Gaps = 6/136 (4%) Query: 223 FKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFP 282 F SYTL + + + + L+ + + + +++HK++T L Sbjct: 324 FNSYTLAEKDKTLGSAADRT--EALASEWSMKSYQTTDADNNIRKHEADWHKKITLSLSC 381 Query: 283 VIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-NPYYIPILYL 341 +IF I A A++R+ P+ +S+ I + S + + +++ Sbjct: 382 LIFFFIG---APLGAIIRKGGLGMPVVVSVLIFVIYYIIDSGATRVAKSGEMNMVLGVWM 438 Query: 342 FLFCISSIFLLMIKKK 357 ++ I K Sbjct: 439 STIVLAPIGAFFTYKS 454 >gi|254514079|ref|ZP_05126140.1| permease YjgP/YjgQ family protein [gamma proteobacterium NOR5-3] gi|219676322|gb|EED32687.1| permease YjgP/YjgQ family protein [gamma proteobacterium NOR5-3] Length = 362 Score = 118 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 53/349 (15%), Positives = 122/349 (34%), Gaps = 25/349 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + L ++ I + ++ + +S + ILL + Y +P L Sbjct: 2 RLRSYLGSDVLGHTLAVSSVLLAIILTGRFVKYLAEAASGKLAAEILLPVMFYRLPGFLE 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E++I+ G L + L A L+ + + I Sbjct: 62 LLLPLGLFIGILMSYGRLYVESEMVILSACGVGPAKLARFTLAPAFLIMLIVAGLSLFIT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYNPN-NTLQGIFIVDSRD 180 P+ + + L Q L F DD + + +P L+ +F+ + Sbjct: 122 PQGAARSEALLNDPQALQGLQLLAAGRFQPRGDDGTVTYAADIDPEAGDLRQVFLYAPKS 181 Query: 181 TQTHK----IYYAQSGSIDLDR----QAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 + + A+ GS+ +D + + L+ G +P D ++ F + Sbjct: 182 ADDERAVAGVTVARRGSVVVDEATGARYLELSHGYRFSGTPGRADYRVVSFGQFGQLLPE 241 Query: 233 ANSSTIVLKANDQNLSFLL-NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S + + LL + +P + R+ H RL+ L + +++++ Sbjct: 242 EPSMARSEPVDAKPTRQLLESRDPED-----------RAALHWRLSVAL---MVPIVALL 287 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY 340 A +R + + +L + + + I + + I +Y Sbjct: 288 ALSLSKTNHRRGRYIKLAPALLLHLCYLFLLASIRTSVAEGDADISQMY 336 >gi|183221200|ref|YP_001839196.1| putative permease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911291|ref|YP_001962846.1| permease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775967|gb|ABZ94268.1| Permease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779622|gb|ABZ97920.1| Putative permease; putative membrane protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 530 Score = 118 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 89/288 (30%), Gaps = 38/288 (13%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 +YIL+ I FL++ F I + I + I L LL GY+ L Sbjct: 38 SILRIYILKEILSPFLVALSFFTMIYMAVAIQKMIGLFVGKGVDFFRLLDYMGYVFGNTL 97 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PM P M ++ ++E+ + +G S + L L+++ + + Sbjct: 98 PMTIPMACLMSGIMAAGRLSGDSEITAMRASGVSFPYIYSNFLVFGFLMTLIVGYLNFYL 157 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFR-------LDDDLYIKISKYNPNNTLQGIF 174 P+ +K ++ F + + + L + Sbjct: 158 GPENTRKMKDFDNWIATYNPLLAIQPGQFSGDKTQDFFSEKGRTMYSGGVDEEGNLSNVQ 217 Query: 175 IVD-------------------SRDTQTHKIYYAQSGSIDLDRQA-------IILNDGEV 208 I + ++ ++ A+ G + + A + L G V Sbjct: 218 IREWAISAAGTDFIMVNNLAVPMGGSKMLQVINAKEGLLVEKKNAAGEYEKSVRLKKGYV 277 Query: 209 HRKSPISKDISIMKFKSYTLQTESANSST-----IVLKANDQNLSFLL 251 P + I I F + + + I +K + +L L+ Sbjct: 278 IEWDPETNAIGITNFMNGEMDYNTPAKKESKTLSINVKPDTFSLPMLI 325 Score = 42.3 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 38/115 (33%), Gaps = 5/115 (4%) Query: 249 FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPI 308 L N + L + E HKR L IF +S +V++ K Sbjct: 386 ALFTQLSELLNESKKTLTGFNVEIHKRFATPLSCQIFFFLSF---PLGLVVKRSGKGMSF 442 Query: 309 FISLSISFGVFWGFSY--IIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTKI 361 +++ + F + I E P ++ + + +MI + K+ Sbjct: 443 TLAVVFLLIYYTFFIFGSGISYKENVPDWVGPWSANIVIATLSIYIMISRTDAKL 497 >gi|150002748|ref|YP_001297492.1| hypothetical protein BVU_0142 [Bacteroides vulgatus ATCC 8482] gi|149931172|gb|ABR37870.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482] Length = 632 Score = 118 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 87/213 (40%), Gaps = 6/213 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K +++IL+ F+ + +FI + + + ++ + +++L + Y T+ Sbjct: 4 IKKLDIFILKSFLMLFIGTFFICLFIFMMQFLWRYVDELVGKGLEMSVLAQFFFYSALTL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+ P + + ELL + G + +I+P++ L F +N+ Sbjct: 64 IPLSLPLAILLAALMTFGNFGERYELLSMKAAGIPLLRIIRPLIIFCTFLCCTSFYFQNV 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 I PK + + L + + E +F+ + I + + + L+ + I + Sbjct: 124 IAPKAQIKLLTLLVSMKQTSPELDIPEGVFYDEIEGYNIYVKQKDRETGMLKDVLIYNFS 183 Query: 180 DT-QTHKIYYAQSGSIDLDRQ----AIILNDGE 207 D + I +A G +++ + L +GE Sbjct: 184 DGFENAHIIWASEGKMEMTADKQHLYLHLYNGE 216 Score = 39.6 bits (91), Expect = 0.74, Method: Composition-based stats. Identities = 22/136 (16%), Positives = 50/136 (36%), Gaps = 6/136 (4%) Query: 223 FKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFP 282 F SYTL + + + + L+ + + + +++HK++T L Sbjct: 324 FNSYTLAEKDKTLGSAADRT--EALASEWSMKSYQTTDADNNIRKHEADWHKKITLSLSC 381 Query: 283 VIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-NPYYIPILYL 341 +IF I A A++R+ P+ +S+ I + S + + +++ Sbjct: 382 LIFFFIG---APLGAIIRKGGLGMPVVVSVLIFVIYYIIDSGATRVAKSGEMNMVLGVWM 438 Query: 342 FLFCISSIFLLMIKKK 357 ++ I K Sbjct: 439 STIVLAPIGAFFTYKS 454 >gi|91774576|ref|YP_544332.1| permease YjgP/YjgQ [Methylobacillus flagellatus KT] gi|91708563|gb|ABE48491.1| permease YjgP/YjgQ [Methylobacillus flagellatus KT] Length = 356 Score = 118 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 53/363 (14%), Positives = 138/363 (38%), Gaps = 12/363 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+ + I S ++ L ++ + ++Q + + ++ +L P Sbjct: 1 MKLLNRYLAQEIVSSIMLIMLALLAMFSFFDLIQELESLGKGNYGISKVLLYVLLSAPGH 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + T L +R +EL+I+ +G S + +L + ++ ++ F+ + Sbjct: 61 VYEVVPVAVLVGTMYALGQFSRYSELIILRVSGISIRKIAFSLLRVGLVFAVITFLVGEL 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P +++ +A ++ L+ + D + ++ + P+ +L I I + + Sbjct: 121 IAPMSEKAAQRIRIQATDSVVAQDFRSGLWVK-DGNSFVNVQNVMPDASLMDIHIYEFDN 179 Query: 181 TQTHKIYY-AQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ-TESANSSTI 238 + A+ GS D + + +V + + I F+ T Q + Sbjct: 180 EFRLRTISNAKEGSFDGNSWNLH----QVTQTHFEEQKIRTNVFQEATWQSLIRPELLNV 235 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 +L ++ ++ L N+ + ++ ++ L ++ ++++ Sbjct: 236 LLVVPEKMSAWNLYFYINHLASNKQKTSRHQIALWSKMIYPLACLVMVILALPFGFL--Q 293 Query: 299 VRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 R IF + + F ++ + +P + ++ LF + IF+L Sbjct: 294 QRSSSASTKIFSGIMLGIVYQVLNRVFVHLGLLNDWSPLFSAVMPTLLFMAAGIFMLYWV 353 Query: 356 KKY 358 ++ Sbjct: 354 ERR 356 >gi|260914417|ref|ZP_05920886.1| YjgP/YjgQ family membrane protein [Pasteurella dagmatis ATCC 43325] gi|260631518|gb|EEX49700.1| YjgP/YjgQ family membrane protein [Pasteurella dagmatis ATCC 43325] Length = 358 Score = 118 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 53/360 (14%), Positives = 141/360 (39%), Gaps = 10/360 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + + Y+ + I + + + +V ++ +I+ +++ LV T + + + +P Sbjct: 4 MNTLDRYLGKSILGAIFATLIMLVGLSGIIKFVEQFRLVGKGTYDIWQAIAYTVLTMPKD 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + L ++ +EL+++ +G SR+ + V+ AI L I Sbjct: 64 VETFFPMAALLGSLIALGNLASRSELIVMQASGFSRLKIGLAVMKTAIPLVIITMAIGEW 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SR 179 P+ + + +KA + + + + + D +I + + + L I+I Sbjct: 124 GIPQTEQFARDMRSKAMTGGSLLSVRDGFWAKEGSD-FIYVKRITDDLELNDIYIYSFGE 182 Query: 180 DTQTHKIYYAQSGSIDLDRQAII-LNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + Q ++ +A S + + + LN+ E+ K ++ + + N Sbjct: 183 NRQLKQVKHADSAVYEEGKWVLHQLNESEI--TPDEIKTVNRLN-SEWKTSLTPDNLGIA 239 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADKR 296 L+ ++S L N + + + + ++L Q + + +++ + R Sbjct: 240 SLRPTSLSISGLSN-YIAFLKDTGQESKKFELTYWRKLFQPISVGVMMMLALSFIFGPLR 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 ++ + + IF + + V F + P ++ +F + + +LL K+ Sbjct: 299 SVTAGARIVTGIFFGF-LFYVVNEIFGPLSLVYNVAPLAGALMPSVMFLLITWWLLSRKR 357 >gi|21674368|ref|NP_662433.1| hypothetical protein CT1549 [Chlorobium tepidum TLS] gi|21647546|gb|AAM72775.1| membrane protein, putative [Chlorobium tepidum TLS] Length = 384 Score = 118 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 58/360 (16%), Positives = 126/360 (35%), Gaps = 19/360 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI R FL + + +I +++ ++ S +L +P Sbjct: 28 TIIDRYIARQFLTIFLFALASFAALFILINLVENLDRFLDRHISFGRILIYYLSGLPDTF 87 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + +P + + V ++ +EL + + G S L+KP L + + ++ I+ I Sbjct: 88 LLTSPLSVLLASLFVTGKLSMQSELPALKSAGMSLSRLMKPFLLVTMAIAALNTINSCFI 147 Query: 122 EPKCR---STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVD 177 P ++ K Q L R ++ + ++K P+ + + + Sbjct: 148 APAMYDWSKGFEKRYLKKQQDNGEEPLH----IRESNNRILTVAKIGPDKKSATTVSLET 203 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKF-KSYTLQTESANSS 236 +Q A S I + I + + S ++ + + L Sbjct: 204 FNGSQIVSRIDADSLRIITRHKYWIFYNTKQRTFSKGAETLVTRAGADTLKLSLAPNTFK 263 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 I ++ N+ ++ LE + H +L L +I LI + Sbjct: 264 MIDTDPDEMNIVQHIDFIWQKARSGLPGLERATVKLHTKLALPLASMIIVLIGV-----P 318 Query: 297 ALVRQRKKIHPIFISLSISFG-VFWGFSYIIHKIEQNPYYIPILYLF----LFCISSIFL 351 ++++ + IS+S+ G ++ G I + + P+L + LF I+ FL Sbjct: 319 LSSKKKRSGLAVEISISLLIGLLYLGMLKTIGSLGYDGLLNPVLAAWLPDILFIIAGTFL 378 >gi|294776418|ref|ZP_06741896.1| putative membrane protein [Bacteroides vulgatus PC510] gi|294449744|gb|EFG18266.1| putative membrane protein [Bacteroides vulgatus PC510] Length = 640 Score = 118 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 87/213 (40%), Gaps = 6/213 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K +++IL+ F+ + +FI + + + ++ + +++L + Y T+ Sbjct: 12 IKKLDIFILKSFLMLFIGTFFICLFIFMMQFLWRYVDELVGKGLEMSVLAQFFFYSALTL 71 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+ P + + ELL + G + +I+P++ L F +N+ Sbjct: 72 IPLSLPLAILLAALMTFGNFGERYELLSMKAAGIPLLRIIRPLIIFCTFLCCTSFYFQNV 131 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 I PK + + L + + E +F+ + I + + + L+ + I + Sbjct: 132 IAPKAQIKLLTLLVSMKQTSPELDIPEGVFYDEIEGYNIYVKQKDRETGMLKDVLIYNFS 191 Query: 180 DT-QTHKIYYAQSGSIDLDRQ----AIILNDGE 207 D + I +A G +++ + L +GE Sbjct: 192 DGFENAHIIWASEGKMEMTADKQHLYLHLYNGE 224 Score = 39.6 bits (91), Expect = 0.74, Method: Composition-based stats. Identities = 22/136 (16%), Positives = 50/136 (36%), Gaps = 6/136 (4%) Query: 223 FKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFP 282 F SYTL + + + + L+ + + + +++HK++T L Sbjct: 332 FNSYTLAEKDKTLGSAADRT--EALASEWSMKSYQTTDADNNIRKHEADWHKKITLSLSC 389 Query: 283 VIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-NPYYIPILYL 341 +IF I A A++R+ P+ +S+ I + S + + +++ Sbjct: 390 LIFFFIG---APLGAIIRKGGLGMPVVVSVLIFVIYYIIDSGATRVAKSGEMNMVLGVWM 446 Query: 342 FLFCISSIFLLMIKKK 357 ++ I K Sbjct: 447 STIVLAPIGAFFTYKS 462 >gi|212690931|ref|ZP_03299059.1| hypothetical protein BACDOR_00419 [Bacteroides dorei DSM 17855] gi|237712585|ref|ZP_04543066.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|237726895|ref|ZP_04557376.1| conserved hypothetical protein [Bacteroides sp. D4] gi|265752264|ref|ZP_06088057.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|212666163|gb|EEB26735.1| hypothetical protein BACDOR_00419 [Bacteroides dorei DSM 17855] gi|229435421|gb|EEO45498.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] gi|229453906|gb|EEO59627.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|263237056|gb|EEZ22526.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 632 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 87/213 (40%), Gaps = 6/213 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K +++IL+ F+ + +FI + + + ++ + +++L + Y T+ Sbjct: 4 IKKLDIFILKSFLMLFIGTFFICLFIFMMQFLWRYVDELVGKGLEMSVLAQFFFYSALTL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+ P + + ELL + G + +I+P++ L F +N+ Sbjct: 64 IPLSLPLAILLAALMTFGNFGERYELLSMKAAGIPLLRIIRPLIIFCTFLCCTSFYFQNV 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 I PK + + L + + E +F+ + I + + + L+ + I + Sbjct: 124 IAPKAQIKLLTLLVSMKQTSPELDIPEGVFYDEIEGYNIYVKQKDRETGMLKDVLIYNFS 183 Query: 180 DT-QTHKIYYAQSGSIDLDRQ----AIILNDGE 207 D + I +A G +++ + L +GE Sbjct: 184 DGFENAHIIWASEGKMEMTADKQHLYLHLYNGE 216 Score = 41.1 bits (95), Expect = 0.25, Method: Composition-based stats. Identities = 22/136 (16%), Positives = 51/136 (37%), Gaps = 6/136 (4%) Query: 223 FKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFP 282 F SYTL + + + ++L+ N + + +++HK++T + Sbjct: 324 FNSYTLAEKDKTLGSAADRT--ESLASEWNMKSYQTTDADNNIRKHEADWHKKITLSISC 381 Query: 283 VIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-NPYYIPILYL 341 +IF I A A++R+ P+ +S+ I + S + + +++ Sbjct: 382 LIFFFIG---APLGAIIRKGGLGMPVVVSVLIFVIYYIIDSGATRVAKSGEMNMVLGVWM 438 Query: 342 FLFCISSIFLLMIKKK 357 ++ I K Sbjct: 439 STIVLAPIGAFFTYKS 454 >gi|224026840|ref|ZP_03645206.1| hypothetical protein BACCOPRO_03597 [Bacteroides coprophilus DSM 18228] gi|224020076|gb|EEF78074.1| hypothetical protein BACCOPRO_03597 [Bacteroides coprophilus DSM 18228] Length = 631 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 37/225 (16%), Positives = 89/225 (39%), Gaps = 6/225 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K ++++L+ F + +FI + + + ++ + + +L + T+ Sbjct: 4 IKKLDIFVLKSFLLLFAGTFFICLFIFMMQFLWRYVDELVGKGLEIKVLAQFFFLSALTL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+ P + + ELL + G + +++PV+ +LL + F +N+ Sbjct: 64 IPLSLPLAILLAALMTFGNFGERYELLSMKAAGIPLLRIMQPVILFCVLLGLTSFFFQNV 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 + PK + + L + + E +F+ D I + + + L+ + I + Sbjct: 124 VGPKAQKELWTLIVSMKQKSPEVDIPEGVFYSDIDGYNIYVKQKDRETGILKDVLIYNFS 183 Query: 180 DT-QTHKIYYAQSGSIDLDRQ----AIILNDGEVHRKSPISKDIS 219 D + I +A G ++L + L +GE +S Sbjct: 184 DGFENAHIIWAAEGKLELTADKQHLYLHLYNGEQFENLKSQAGLS 228 Score = 36.9 bits (84), Expect = 5.5, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 51/120 (42%), Gaps = 9/120 (7%) Query: 216 KDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPE----LLETYRSE 271 + +S++ S T ++ L + LS L + + + +Y + + +RS+ Sbjct: 314 EKLSVINIDS-VFNTLTSAEKLKTLSTCENRLSSLSS-DWSMKSYLTKETDANIRGHRSD 371 Query: 272 FHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ 331 +HK++T L +IF I A A++R+ P+ +S+ I + S + Sbjct: 372 WHKKITLSLACIIFFFIG---APLGAIIRKGGLGMPVVLSVLIFILYYIIDSGATRVAKS 428 >gi|323144743|ref|ZP_08079320.1| permease, YjgP/YjgQ family [Succinatimonas hippei YIT 12066] gi|322415494|gb|EFY06251.1| permease, YjgP/YjgQ family [Succinatimonas hippei YIT 12066] Length = 336 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 51/332 (15%), Positives = 116/332 (34%), Gaps = 26/332 (7%) Query: 32 ILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDN 91 +++ I+ + T ++I+ ++ Y +P + ++ P + L + ++E++++ + Sbjct: 1 MIRLISRAAVGTVPVDIITNLAAYAVPEIAMIMLPLTLFLACLITLGRICSDSEMVVMRS 60 Query: 92 TGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFF 151 G S ++ + LA SI + + P + + L + + F +E F Sbjct: 61 IGFSPANVMTIAMILAFFTSIVTAFNCIYLVPWASNAKETLMKQTENNPQFLPIESGKFS 120 Query: 152 RLDDDLYIKI----SKYNPNNTLQGIFIVDSRDTQTHKIYY-AQSGSIDLDRQAII---L 203 + I I K + + +F+++S A +G + D ++ L Sbjct: 121 SM-GGYNIYIENVEEKSDGEKNIANVFVMESPFANVGNSMTIADNGYLVHDENGVLWLEL 179 Query: 204 NDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA-NDQNLSFLLNPNPNNPNYRP 262 + G + F + +NS + + ++ LLN Sbjct: 180 DKGSRFEVLTKDGTSNKAIFDKFRAPVAGSNSELQEDDSISSRDTFELLNSGEK------ 233 Query: 263 ELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGF 322 E RL+ I I+I RQ + + L + ++ F Sbjct: 234 ----RGIVEAQWRLSPIFAVFILTFIAIP--LSMVNPRQGRFARLMPAILIYA--SYYMF 285 Query: 323 SYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + + + LY LF + +FL + Sbjct: 286 LLSCRNMINSGSWP--LYPGLFIVPVVFLFFV 315 >gi|88808511|ref|ZP_01124021.1| possible permease [Synechococcus sp. WH 7805] gi|88787499|gb|EAR18656.1| possible permease [Synechococcus sp. WH 7805] Length = 388 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 53/365 (14%), Positives = 127/365 (34%), Gaps = 22/365 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + ++L + L + ++ V + + + + S + I +++ +P+ L Sbjct: 18 LLDRWLLGELLGPLLFAVAAFTVVSLSVGVMFELVRQIVESGLPVGIAVQVLLQRLPSFL 77 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P M + + ++ N+EL + + G + +I P L LA+++S FI + + Sbjct: 78 VISFPMATLMASLLAYSRLSANSELTALRSVGVTATRMIVPALILALVMSGLTFIFNDAL 137 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-------------YIKISKYNPNN 168 P+ + + A+A + N+ + L K+ + Sbjct: 138 VPRANRSAETTLARALGKAIATEKGTNIVYSRFGRLQETDGTSNKGLAQLFYARKFR-DG 196 Query: 169 TLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 + + ++D ++ A + + DG++ +P S F Y Sbjct: 197 VMNEVTVLDFTRAGFTQMLVADRAVWNESQAKWQFFDGQILTLTPSGSTTS-ADFDQYLY 255 Query: 229 QTESANSSTIVLKANDQNLS---FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIF 285 +A L + N++ L + + ++ T + ++F Sbjct: 256 PLSAAPIRIAKLPKDANNMTVVEALQAKDLLQQAGDIKEARRLEVRIQEKFTLPMACLVF 315 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC 345 GLI K R + I + L + V++ S+ + P+L + Sbjct: 316 GLIGASLGAKPNNRTSRSQGFGISVVLIL---VYYVLSFSFSSLGVKGTLPPLLAAWSPV 372 Query: 346 ISSIF 350 + S+ Sbjct: 373 LISLA 377 >gi|261364966|ref|ZP_05977849.1| permease, YjgP/YjgQ family [Neisseria mucosa ATCC 25996] gi|288566764|gb|EFC88324.1| permease, YjgP/YjgQ family [Neisseria mucosa ATCC 25996] Length = 356 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 44/364 (12%), Positives = 128/364 (35%), Gaps = 14/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +I+ + + + + + + +P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEIINEVGDLGKGSYNGATMAQYVLMQMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + +EL +I +G S L+ + ++ ++ Sbjct: 61 AYELMPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLVLSQFGLIFALATAALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + + + A + L+ + + + I + + P++TL GI I + D Sbjct: 121 IAPVLSQKAENIKSTAINGKISTGNT-GLWLK-EKNSIINVREMLPDHTLLGIKIWERND 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ + + L + S ++S +++ + + +++ Sbjct: 179 KNELTQATEAESAVLNNDGSWQLKNIRRSTLSEDKVEVSTAAEENWPIAVKRNLMDVLLV 238 Query: 241 KANDQNLSFL---LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 K + ++ L ++ NN + + Y + ++L + + L++ Sbjct: 239 KPDQMSVGELTTYISHLENN----NQNTQIYAIAWWRKLVYPVAAWVMALVAFAF--TPQ 292 Query: 298 LVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R +F + + + F + P+ L F + +++L+ Sbjct: 293 TTRHGNMGLKLFGGICLGLLFHFAGRLFGFTSQLYGVPPFLAGALPTIAFALLAVWLIRR 352 Query: 355 KKKY 358 +++ Sbjct: 353 QERR 356 >gi|330975728|gb|EGH75794.1| permease YjgP/YjgQ [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 243 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 38/232 (16%), Positives = 87/232 (37%), Gaps = 11/232 (4%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ R + + ++ + ++ + +S +L I G+ +P L ++ Sbjct: 5 RYLSREVLLTLSAVSAVLLVFIMSGRFIKYLAQAASGALDPGVLFLIMGFRLPGFLQVIL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + + +E+ ++ TG S+ L+ + A L+ + + + P+ Sbjct: 65 PLGLFLGILMAYGRLYLESEMTVLAATGMSQQRLLAITMGPATLVGLLVAWLSFSLAPQG 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYNPNNT-LQGIFI------VD 177 + L + F L F L D I + + + + L G+FI D Sbjct: 125 ATQFSLLINQQDAMTEFDTLVPGRFQALRDGTRITYTKELSEDRSQLAGVFISEKRMSSD 184 Query: 178 SRDTQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSY 226 + A+ G ++ +IL +G + +P + D ++K+ +Y Sbjct: 185 KSKDNGITVLVAEKGHQEVRPNGSRFLILENGYRYDGNPGAADYRVIKYDTY 236 >gi|262068069|ref|ZP_06027681.1| permease, YjgP/YjgQ family [Fusobacterium periodonticum ATCC 33693] gi|291378155|gb|EFE85673.1| permease, YjgP/YjgQ family [Fusobacterium periodonticum ATCC 33693] Length = 363 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 64/364 (17%), Positives = 135/364 (37%), Gaps = 13/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K ++YI + + FLM+ + + + + Q + I ++ + L+P + Sbjct: 2 IKKLDIYISKYFIKYFLMNIIGFMGVFLLAQTFKIIKYINQGKLEGGEIFDYILNLLPKM 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 P + ++ M N E++ + +G + +++ L +A ++S+F+F N Sbjct: 62 FVETAPLSVLLAGLITISIMASNLEIVSLKTSGIRFLRIVRAPLIIAFVISLFVFFVNNS 121 Query: 121 IEPKCRSTIK-QLSAKAQLALTFSYLEENLFFRLDDDLYIK----ISKYNPNNTLQGIFI 175 I K + I + +L +EN FF ++D YI I++ I + Sbjct: 122 IYTKSLAKINFYRKGEIDASLRLPKTKENAFFINNNDGYIYLMGNINRETGLAEKVEIVV 181 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN- 234 D+ ++ +I AQSG D + + +L+ ++ K I+ +++ S + N Sbjct: 182 YDTEISKPVEIITAQSGKYDKENKKWLLSGVNIYNVE-TKKSITKVEYDSDRFGEDPNNF 240 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + L N E Y SE KR + I I + Sbjct: 241 IRAAAEDPRMLTIKELKKTIKEQKNI-GEDTRIYLSELAKRYSFPFASFIVAFIGLSV-- 297 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLL 352 VR + + I + +G + S + N P + ++ I + Sbjct: 298 SSKYVRGGRTTINLVICVVAGYGYYLV-SGAFEAMSLNGILNPFISSWIPNILYFIIGMY 356 Query: 353 MIKK 356 + + Sbjct: 357 FMNR 360 >gi|297537470|ref|YP_003673239.1| permease [Methylotenera sp. 301] gi|297256817|gb|ADI28662.1| permease YjgP/YjgQ family protein [Methylotenera sp. 301] Length = 372 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 52/364 (14%), Positives = 132/364 (36%), Gaps = 18/364 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F +L + + + L ++ I + + L + + + I G+ I +P Sbjct: 2 LFRRSLLHELIATASGTFLILIGIVIAQRAGYLVQLAAKGVLPNDAITTILGFNIIRFMP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + L+ R++E++I + G S + I+P+L A + + + + Sbjct: 62 LLLSLSLFLAILLTLSRWYRDSEMVIWFSAGLSITSWIRPILVFATPIVVIIAFLSLFVT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIKISKYNP-NNTLQGIFIVDSRD 180 P + ++ + + + + +F D I ++ N ++ IF+ + Sbjct: 122 PWATNKVEDFRVQLESRDDLAAISPGVFKESAHADRVFFIESFDELGNIVKNIFVQSIQH 181 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + I AQ + +++ G + + + + S +F+ Y ++ E++ + Sbjct: 182 QKLGIIVAAQGSRLVEKNGDNFLLMEHGHRYEGARGTSEYSTTEFEKYAIRVEASEAKRE 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + L+ NN +E RL PV +++++A AL Sbjct: 242 PPSTQSISSRDLIMNKSNNN----------IAELQWRLA---MPVSALILALLAIPLSAL 288 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-NPYYIPILYLFLFCISSIFLLMIKKK 357 + + +++ I + I I Q I L+ ++ M ++ Sbjct: 289 DPRAGRSANFALAIVIYIIYNNLLNIIQAWIAQGKVSGIIGLWPIHLVFGTLVFYMFYRR 348 Query: 358 YTKI 361 ++ Sbjct: 349 ALQL 352 >gi|332290236|ref|YP_004421088.1| putative permease YjgP/YjgQ family [Gallibacterium anatis UMN179] gi|330433132|gb|AEC18191.1| putative permease YjgP/YjgQ family [Gallibacterium anatis UMN179] Length = 356 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 58/364 (15%), Positives = 130/364 (35%), Gaps = 17/364 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + YI + I + + +V ++ +I+ +++ + + + IP + Sbjct: 3 NTLDRYIGKTILATIFVVLFLLVGLSAIIKFVEQFRAIGEGNYDTAKAIAYTLLTIPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + L S+ N+EL+++ +G SR + V+ +AI L I Sbjct: 63 ETFFPMAALLGALIGLGSLASNSELVVMQASGFSRFQIGLSVMKVAIPLIILNMALGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SRD 180 P+ +++ K+ + ++ + D + ++ I N L GI+I ++ Sbjct: 123 IPQTEQFAREMRYKSLTGGSLLSVK-GSVWAKDGNSFVYIQHIPKENQLNGIYIYQFDQN 181 Query: 181 TQTHKIYYAQSGSIDLDRQAI------ILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 K+ A + + LN + K ++K + L S Sbjct: 182 RNLQKMSQANRATYANNEWRFNQISESELNGDHITNKKYLNK-VWQTSITPDKLGMVSLR 240 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 S + + + FL N + +T+ + ++L Q + + L+++ Sbjct: 241 PSMLSITGLSDYIQFLKN--------TGQDTKTFELTYWRKLLQPISISVMMLLALSFIF 292 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 I I +F V + + P +I L +F + I+ LM Sbjct: 293 GPLRSVTSGVRVIIGICCGFAFYVLDQVFGPLSLVYNIPPFIGALAPSIFFAAIIWWLMA 352 Query: 355 KKKY 358 K++ Sbjct: 353 HKRH 356 >gi|167856193|ref|ZP_02478930.1| hypothetical protein HPS_08256 [Haemophilus parasuis 29755] gi|167852682|gb|EDS23959.1| hypothetical protein HPS_08256 [Haemophilus parasuis 29755] Length = 308 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 87/249 (34%), Gaps = 19/249 (7%) Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + ++ P + L +E+ ++ G + L+K LFL+I + + Sbjct: 1 MAQLMLPLSLFIALLLTLGRFYAESEITVMRACGVGQSLLVKAALFLSIFTTAVAVYNVF 60 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV--D 177 + P + ++ A+A+ F+ L F + I +NT+ I++ + Sbjct: 61 WLTPWAINKQSEMLAEAKANPRFAALAAGQFMS-AGGYVLFIDNI-KDNTINDIYVFQPE 118 Query: 178 SRDTQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + + A+SG + Q + L + + +P + D I F +Y + Sbjct: 119 QQKKNKPSVVVAKSGELQGLPNGDQMLNLTNSTRYEGTPQTADFRISHFDNYNAYLGYQD 178 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + + LL+ E ++E RL L + L+++ Sbjct: 179 VDSDEKLVQRADFQKLLS----------ETSPEAQAELQWRLALILSVPLMALLAVP--M 226 Query: 295 KRALVRQRK 303 RQ + Sbjct: 227 SSVNPRQGR 235 >gi|268317250|ref|YP_003290969.1| permease YjgP/YjgQ family protein [Rhodothermus marinus DSM 4252] gi|262334784|gb|ACY48581.1| permease YjgP/YjgQ family protein [Rhodothermus marinus DSM 4252] Length = 361 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 51/365 (13%), Positives = 127/365 (34%), Gaps = 10/365 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 M + +I+R + +L ++ V+ ++ I+ S+ + L IP Sbjct: 1 MTLIDRHIVRRLLLGYLFFTGALIVFFIVLHYVEYIDDFMDRGASMREVFLVYYPSYIPE 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ + +P + V M + E++ + +G S L++P + LA++++ F+F Sbjct: 61 IVRLTSPLALFLACLYVTGRMAQGLEIVALQMSGVSLYRLLRPCVALALIVTGFMFWFNG 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P T+ K + +L + ++ + Y+ + + Sbjct: 121 WVVPVTNRTVVAFDEKYLSKTPRQFDLSHLHRQARPGQFLSVGYYDRERRIAYRIALQQF 180 Query: 180 DTQTHKIYYAQSGSIDLDR--QAIILNDGEVHRKSPISKDISI-MKFKSYTLQTESANSS 236 Y + ++ + QA ++ +G P +++ ++ + L + + Sbjct: 181 AEGRRLAYRLDAPRMEWNDSLQAWVVPEGIARHFEPDGREVRRPVRRQQLDLPLYPRDLA 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L L ++ + +I LI + A R Sbjct: 241 RTEREVEAMTLPDAAAHLAALRRSGAGHLGRPLVAYYSKFAYPFANLILVLIGVPLASVR 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMI 354 R+ + I I L ++F + +I P+L +L + L+++ Sbjct: 301 ---RRGGQAVQIGIGLGVAFA-YLALQKLIEPFGYTETLPPLLVAWLPHLVFLAGALVLV 356 Query: 355 KKKYT 359 + T Sbjct: 357 ARTRT 361 >gi|213423383|ref|ZP_03356371.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 285 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 42/277 (15%), Positives = 96/277 (34%), Gaps = 22/277 (7%) Query: 83 NTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTF 142 +E+ ++ G S+ L+K + LA+ I ++ P ++ A+A+ Sbjct: 1 ESEITVMHACGLSKAVLVKAAMVLALFTGILAAVNVMWAGPWSSKHQDEVLAEAKANPGM 60 Query: 143 SYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT--HKIYYAQSGS---IDLD 197 + L + F + + + + + +F+ R + A SG + Sbjct: 61 AALAQGQFQQATNGSSVLFIESVDGSDFHDVFLAQIRPKGNARPSVVVADSGHLTQLRDG 120 Query: 198 RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNN 257 Q + LN G + + +D I F++Y + + ++ L N + + Sbjct: 121 SQVVTLNKGTRFEGTALLRDFRITDFQNYQAIIGHQAVALDPNDTDQMDMRTLWNTDND- 179 Query: 258 PNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFG 317 R+E H R+T + L+ + RQ + +S+ + Sbjct: 180 ---------RARAELHWRITLVFTVFMMALMVVP--LSVVNPRQGR-----VLSMLPAML 223 Query: 318 VFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 ++ F I I+ N + + ++ L + Sbjct: 224 LYLLFFLIQTSIKSNGGKGKLDPVIWMWAVNLIYLAL 260 >gi|332290859|ref|YP_004429468.1| permease YjgP/YjgQ family protein [Krokinobacter diaphorus 4H-3-7-5] gi|332168945|gb|AEE18200.1| permease YjgP/YjgQ family protein [Krokinobacter diaphorus 4H-3-7-5] Length = 528 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 93/236 (39%), Gaps = 15/236 (6%) Query: 24 VFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRN 83 +FI + + I ++ ++++K + +P+++ +V P + + + N Sbjct: 1 MFIFVLQSVWLYIQELAGRDLDFDVIIKFLLFAMPSLVTLVLPLSVLLTSIMTFGNFAEN 60 Query: 84 TELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFS 143 E + +TG S +K V++ I L+I F+ N I P + + L Sbjct: 61 YEFAAMKSTGISLQRAMKSVIYFVIFLAIGSFLFANHIIPASQIEFRNLRRNIGKLKPAM 120 Query: 144 YLEENLFFRLDDDLYIKISKY--NPNNTLQGIFIVDSRDT--QTHKIYYAQSG----SID 195 + F + +D ++++K + + L+ I I + + + A G SID Sbjct: 121 LIRSGQFNEITEDFNMRVAKKYGDRDQYLRDIVIHQAEKGRMGNYTVIIASEGELISSID 180 Query: 196 LDRQAIILNDGEVHR-------KSPISKDISIMKFKSYTLQTESANSSTIVLKAND 244 ++ L DG + K + + F++YTL + + + L D Sbjct: 181 SPTLSLKLTDGNYYTEVQKKDYKERKKEPFAKSYFETYTLNIDLSELDAVDLDDKD 236 >gi|253702061|ref|YP_003023250.1| permease YjgP/YjgQ family protein [Geobacter sp. M21] gi|251776911|gb|ACT19492.1| permease YjgP/YjgQ family protein [Geobacter sp. M21] Length = 360 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 58/370 (15%), Positives = 143/370 (38%), Gaps = 23/370 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI R + + + I V+ +++++ + + S L IP + Sbjct: 1 MTILTRYIARAYLKMLSLCLGSFLTIYLVVDFMEKVSRFTRAGASWKHLALFFITKIPEM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P M T L +++ +EL I + G S + P+L +++L+S+ + Sbjct: 61 IIDAAPLAVLMATLLTLGTLSLTSELTAIRSCGVSLFRISLPILVISVLMSLGVLAIGEF 120 Query: 121 IEPKCRSTIKQLSAKA---QLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIV 176 + PK + + + + + + + ++N++FR ++ ++ S + P N L+GI + Sbjct: 121 VLPKSFAQ-RTYIQEVLIQKKSASAFFRQQNIWFR-EEGTVLRASLFEPARNELKGITLW 178 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI----SKDISIMKFKSYTLQTES 232 D + + ++ L + +L D V + ++ + + LQ + Sbjct: 179 DLQPGTGEPLKRTEADLALLGPKGWVLRDAVVRQFRDGEVSATQKYRELPVQ---LQLKP 235 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 A+ T+ ++ +L L N Y ++ H R++ + + I Sbjct: 236 ADLKTLGKYSDSMSLVEL-NRYCRKLRASGYDPTRYVTQMHSRISMPFGCAVMAFLGIPF 294 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSY-IIHKIEQNPYYIPILYLFLFCISSIFL 351 A + I+ + + GF Y I++ + + + +L + ++ F+ Sbjct: 295 ALRGG--------RSSGIAFGVGLSIGVGFLYVIVNSVIISVGQVGLLPPVVAAWATNFI 346 Query: 352 LMIKKKYTKI 361 + + + Sbjct: 347 FFVAGAWLSL 356 >gi|226951739|ref|ZP_03822203.1| permease YjgP/YjgQ-like protein [Acinetobacter sp. ATCC 27244] gi|226837529|gb|EEH69912.1| permease YjgP/YjgQ-like protein [Acinetobacter sp. ATCC 27244] Length = 340 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 48/327 (14%), Positives = 113/327 (34%), Gaps = 16/327 (4%) Query: 31 QILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIID 90 Q+++ + +LL I Y +P L ++ P F + V + + E+ +++ Sbjct: 4 QLIKIFGRAAQGRLDGGVLLSIIAYRLPEFLTLILPLGFFIGLMLVFGRLYVDHEMAVLN 63 Query: 91 NTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLF 150 +G SR L + +L + + I + + L + F + F Sbjct: 64 GSGVSRNQLTRLLLPMTAVFLIVQAVLMCWGASAGIRGYQSLMQTQAVRAGFDLVRPKEF 123 Query: 151 FRLDDDLYIKISKYNPNNT-LQGIFIV--DSRDTQTHKIYYAQSGS---IDLDRQAII-L 203 I + + L+ IF R+ + ++ A+ + I+ D +++ L Sbjct: 124 ISSGS-YTIYAGSLSEDRKNLKDIFYYYKSDREDKPDQMILAKEATRVEIENDTASVVDL 182 Query: 204 NDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPE 263 G + P + +F+SY L+ E+ S + + ++ Sbjct: 183 VQGRRYEIYPNQPRYTQAEFQSYRLRLENDKDVNFE--------SEDVEALSMSKLWQKR 234 Query: 264 LLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFS 323 R E R+ V+ +++ ++ + ++ P + + Sbjct: 235 DDFVVRGELGWRIFGPFVMVVALFLAVALSEVSPRQGRYYRLIPAIFIFASLIVLMIAIK 294 Query: 324 YIIHKIEQNPYYIPILYLFLFCISSIF 350 I K E + + P + L +++F Sbjct: 295 TRISKEELDIWAYPAVLLIYGIAAALF 321 >gi|251791280|ref|YP_003006001.1| permease YjgP/YjgQ family protein [Dickeya zeae Ech1591] gi|247539901|gb|ACT08522.1| permease YjgP/YjgQ family protein [Dickeya zeae Ech1591] Length = 370 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 54/367 (14%), Positives = 135/367 (36%), Gaps = 25/367 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETFKSQVAILFILLLIFFCQKLVRILGAAVDGDIPTNLVLSLLGLGVPQMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ G S+ L+K L L++L + + + Sbjct: 62 LILPLSLFLGLLMTFGRLYAESEITVMHACGLSKSVLLKAALLLSLLTASLATANVLWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RD 180 P ++ A+A+ + L E F + D + + + +F+ R+ Sbjct: 122 PWSSRHQDEVLAQARANPGMASLAEGQFQQTQDGNSVLFVGKVNSGDFERVFLAQLHPRE 181 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A G++ Q + L+ G + + + +D I F +Y + Sbjct: 182 NTRPSVVVADRGTVAARGDGSQVVTLSKGTRYEGTAMLRDFRITDFINYQAIVGYQPVAV 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +L L + R+EFH RLT L ++ ++ + Sbjct: 242 DPSNVEQMSLKTLWESSD----------IAARAEFHWRLTLILSVLVMAVMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFLFCISSIFLLMI 354 RQ + +S+ + ++ F + + N P+++++L + + L +I Sbjct: 290 NPRQGR-----VLSMLPAMLLYLVFFLLQSSLRSNAGKGKLDPMVWMWLTNLVYLALAVI 344 Query: 355 KKKYTKI 361 + + Sbjct: 345 LNLWDSV 351 >gi|189500954|ref|YP_001960424.1| permease YjgP/YjgQ family protein [Chlorobium phaeobacteroides BS1] gi|189496395|gb|ACE04943.1| permease YjgP/YjgQ family protein [Chlorobium phaeobacteroides BS1] Length = 360 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 57/363 (15%), Positives = 130/363 (35%), Gaps = 21/363 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI R +++ + + V + V+ +++ + ++ LIP Sbjct: 1 MKLLDKYIARQYFTTYVFAGISFVSLFIVVSLIENLGSFIDKGIEAEQIILYYWSLIPET 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + +P + + + ++ ++EL + G L+KP L +A+L+S F ++ Sbjct: 61 ILLTSPISSLLASLYITGRLSGSSELTAMKTAGAGMHQLLKPFLAVALLVSFFNILNAGW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD--DLYIKISKYN-PNNTLQGIFIVD 177 + PK + +K TF + + + + + + I + NNT I + Sbjct: 121 LYPKA-AALKNRFETQYFDKTFENISSSNNLHILESRNRILSIGSLDQQNNTGLNISLET 179 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILN---------DGEVHRKSPISKDISIMKFKSYTL 228 + A+ S D IL+ +G + +P + + TL Sbjct: 180 FEGPEIASRIDAKKISYDETLDRWILHETRTRVFSQNGMSYTLNPGN--------DTLTL 231 Query: 229 QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 + + + ++ ++ ++ L+ +FH +L L VI L Sbjct: 232 SLSATSLRDLSIQPDEMDIMQHYRYIDEKREAGFSNLDRVIVKFHNKLALPLASVIVILT 291 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 + + ++ + + I G+ S ++ +P L LF Sbjct: 292 GVPLSARKKRSGLAIEFGISLFTGFIYLGLQRTLSTAGYRGLLDPVLAAWLPDLLFLAVG 351 Query: 349 IFL 351 I + Sbjct: 352 IAI 354 >gi|325578599|ref|ZP_08148699.1| YjgP/YjgQ family membrane protein [Haemophilus parainfluenzae ATCC 33392] gi|301156461|emb|CBW15932.1| conserved inner membrane protein [Haemophilus parainfluenzae T3T1] gi|325159835|gb|EGC71965.1| YjgP/YjgQ family membrane protein [Haemophilus parainfluenzae ATCC 33392] Length = 359 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 48/361 (13%), Positives = 128/361 (35%), Gaps = 9/361 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + + YI + I + + +V ++ +I+ +++ V + + + +G IP Sbjct: 3 MNTLDRYIGKSILGAIFATLFTLVGLSAIIKFVEQFRSVGKGSYDIWQAVAYTGLTIPKD 62 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ +EL+++ + G SR + V+ A+ L +F I Sbjct: 63 VETFFPMAALLGALIALGNLASRSELVVMQSAGFSRFKIGLAVMKTALPLVLFTMIIGEW 122 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + + +A + ++ ++ + ++ ++ + + + L+ I+I D Sbjct: 123 GIPQTEQFARDMRTRALSGGSMLSVKNGVWAKDGNN-FVYVRRITDDAQLEDIYIYTF-D 180 Query: 181 TQTHKIYY--AQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 Q + + A + L S + + + + Sbjct: 181 EQRNLTHLKHANQAQYSAENNQWQLRQVNNSAVSKEQITTTNRLTEDWATSLTPDKLGAV 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEF--HKRLTQWLFPVIFGLISIVAADKR 296 L+ ++S L + ++ R E +++ Q L + ++++ Sbjct: 241 SLRPTSLSISGLY---EYIAFLKQTGQDSRRFELTYWRKIFQPLSVGVMMMLALSFIFGS 297 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 I F V + + P ++ L L ++ I+ L+ +K Sbjct: 298 LRSVTAGARIVTGICFGFLFYVVNEIFGQMSVVFNAPAFLGALMPSLLFMAIIWWLLARK 357 Query: 357 K 357 + Sbjct: 358 R 358 >gi|162146456|ref|YP_001600915.1| hypothetical protein GDI_0632 [Gluconacetobacter diazotrophicus PAl 5] gi|209543541|ref|YP_002275770.1| permease YjgP/YjgQ family protein [Gluconacetobacter diazotrophicus PAl 5] gi|161785031|emb|CAP54575.1| putative membrane protein [Gluconacetobacter diazotrophicus PAl 5] gi|209531218|gb|ACI51155.1| permease YjgP/YjgQ family protein [Gluconacetobacter diazotrophicus PAl 5] Length = 363 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 52/369 (14%), Positives = 128/369 (34%), Gaps = 25/369 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+LR IG+ + + ++ + S N +L + + L Sbjct: 2 IIRNYLLREIGKPLAAMLGVCMALFASYSAADFLSEAVNGLLSTNTILALVTLKLLIGLE 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L ++ N+E+ + + +++ V+ LA ++I + + + Sbjct: 62 VLVPVSLYLSIVLALGALYGNSEITALHALRVTPGMILRHVMTLAAGVAIVVGLLSLFVR 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD--LYIKISKYNPNNTLQGIFIVDSRD 180 P + LS AQL+L ++ F+ + + + + P + IF+ R Sbjct: 122 PWAYHQLHNLSKSAQLSLDVDAMQAGTFYVVQNGARVIFLTEREGPGTPARDIFVQVRR- 180 Query: 181 TQTHKIYYAQSGSIDLDRQ-----AIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 +T +I +A+ G D + L + V+ + + Sbjct: 181 AKTTQIIHAELGYPMTDEGKQSDVYVRLKNAHVYDIGRQPG-----------VSDKVLTV 229 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYR--PELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 I N + L + P+ + +EF RL+ + ++ ++++ A Sbjct: 230 REITQDPNRHSTEPLGYSSIAAPSLQLAASHAPADVAEFQWRLSTPITTMLLAMLAVPLA 289 Query: 294 -DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 + R K I I +++ H + +P ++ ++ + Sbjct: 290 RGRPRQNRYGKLGAAILIFFVYYLLYTSARTWVQHGM---VAAMPGIWWAPALLAVLTGF 346 Query: 353 MIKKKYTKI 361 M++ + + Sbjct: 347 MLRDQIPAL 355 >gi|289612795|emb|CBI60020.1| unnamed protein product [Sordaria macrospora] Length = 187 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 77/186 (41%), Gaps = 1/186 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M S + Y+ R I + L + + ++L+ + V++ ++++ ++ L+P Sbjct: 1 MPSIDRYMARLIAVPLFSTLLISAMLLVLDRMLRLFDFVAAEGGPVSVVWRMLANLLPEY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + + ++EL ++ G S L++ A +L+ Sbjct: 61 LGLGIPIGLMLGILLAFRKLATSSELDVMLGVGMSYWRLLRVPFIYATVLAAANLAIVGY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISK-YNPNNTLQGIFIVDSR 179 I+P R + L + + + ++ F +L + + ++I + + L+GIF+ SR Sbjct: 121 IQPLARYNYEALRFELRTGALGASIKVGEFTKLGERMTLRIEESRDSGADLRGIFVQASR 180 Query: 180 DTQTHK 185 Sbjct: 181 PDGQWL 186 >gi|325954886|ref|YP_004238546.1| permease YjgP/YjgQ family protein [Weeksella virosa DSM 16922] gi|323437504|gb|ADX67968.1| permease YjgP/YjgQ family protein [Weeksella virosa DSM 16922] Length = 365 Score = 116 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 62/368 (16%), Positives = 143/368 (38%), Gaps = 15/368 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 MK + YI++ +F L + IA +I Q+++ + S+ ++ L+ Y Sbjct: 1 MKILDKYIVKNFLGTFFFMVLILTSIAIIIDFTQKLDRIDSTGSTVTEALIHFYPYWGVW 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ P + + + TE++ + + G S L +P + +A L+ + N Sbjct: 61 IVNTFLPVAVFISVIYFTSRLTAQTEIVGMLSGGISFYRLTRPYVIVAAGLAFTAMMVNN 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFS---YLEENLFFRLDDDLYIKISKYNP-NNTLQGIFI 175 ++ P + + L++ Y ++ + ++ + Y+ + Y+ F+ Sbjct: 121 VVLPWANIKKNKYQYEHLLSMRARKEYYKQQVISAQISSNEYVFVESYDRIEKRSDSYFL 180 Query: 176 VDSRDT-QTHKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESA 233 D+ Q + A S + D + IL + E SP I+ + K L+ Sbjct: 181 YQKFDSVQLKEQIMASSFTWDDKDSSYILQNVFERKVLSPKKDSIAYLSSKKIKLKATPD 240 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 A N L+ + N + Y +E +R++ I ++++ + Sbjct: 241 EILPEGYVAETMNSFELMKFIESQKNKGSANVVVYENELQQRVSSPFSTFILTILALSLS 300 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL----FCISSI 349 K+ R+ + + ++++F V+ FS I + Y P + ++ F + + Sbjct: 301 SKK---RRGGIGVNLAVGITLAF-VYIFFSQIATTFSEQGYVTPFVAAWIPNVVFGLLTT 356 Query: 350 FLLMIKKK 357 FL + + Sbjct: 357 FLYFRRAQ 364 >gi|319954060|ref|YP_004165327.1| permease yjgp/yjgq family protein [Cellulophaga algicola DSM 14237] gi|319422720|gb|ADV49829.1| permease YjgP/YjgQ family protein [Cellulophaga algicola DSM 14237] Length = 359 Score = 116 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 60/362 (16%), Positives = 135/362 (37%), Gaps = 8/362 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YIL+ +F + L + I ++ + ++ N + + LN +L G + Sbjct: 1 MTILDKYILKRYLVTFSVMLLLFIPIGIMVHLSEQYNKMQDNEAPLNEILMYLGNFSIYI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 M+ P + + + NTE++ + ++G S ++P L A++++ F+ + Sbjct: 61 GSMLLPIFLFLSVIFFTSKLAGNTEIVAMLSSGISYGRFLRPYLMGAVIVAAFMLLMGMF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + K + EN+F +L+ + +I +S+++P + F ++ + Sbjct: 121 IVPNASKGFNEFKFKYLKKGKQDRVTENIFNQLNANDFIYVSRFDPTRDIGYNFSMEHFN 180 Query: 181 TQTHKIY--YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 Y A + L ++ + + + + + + Sbjct: 181 KDNVLEYKLSAANIRWIEADSIYRLTSYVKRTLKGDTEILETKRRLDTVFPFKINDLTPV 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 A +NL L N + TY +KR T + I LI++ + Sbjct: 241 SYVAETKNLFELNEFIANEKRKGASNINTYILVKYKRWTMPITAFILTLIAVAV---SSQ 297 Query: 299 VRQRKKIHPIFISLSISFGVFW---GFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 R+ + + ++F + F + + +P I+ LF + +LL Sbjct: 298 KRRGGMGVNLAFGILVAFVYIFFDRVFGTLAEQSGFSPLLAVIVPNVLFGFLAFYLLQKA 357 Query: 356 KK 357 K+ Sbjct: 358 KR 359 >gi|52842836|ref|YP_096635.1| permease [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629947|gb|AAU28688.1| permease [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 333 Score = 116 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 49/346 (14%), Positives = 126/346 (36%), Gaps = 30/346 (8%) Query: 30 IQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLII 89 Q +Q +N +S + +++K+ +P ++ ++ P F + + +E+ ++ Sbjct: 3 NQFIQYLNRAASGSIPGFVIMKLLMLELPNLMGLLLPLGFYVALLLAYGRLYAESEMTVL 62 Query: 90 DNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENL 149 G L+K +A ++ + + I P +L + + Sbjct: 63 RACGYGPRQLLKHSFAMATVVLVVVAIVMIWASPVIAVERIKLIRSTGIKTLIQTIMPGR 122 Query: 150 FFRLDDD-LYIKISKYNPNNT-LQGIFIVDSRDTQTHK---IYYAQSGSIDLDRQA---- 200 F ++ + N +++ + IF+ + +A +++ Q Sbjct: 123 FHAINSGQQIFYVQSMNRDHSQAEQIFMAKHSVQDNRLLWDVLWADKAFAEVNPQTGEEY 182 Query: 201 IILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--STIVLKANDQNLSFLLNPNPNNP 258 I+L +G+ ++ P D I +F SY + + A ++L L N + Sbjct: 183 IVLQNGKEYQGVPGHADYQIAEFASYKSKLPNPTVVMHDDARTAKTRDLWPLNNHDLKK- 241 Query: 259 NYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGV 318 +E R++ L + L+++ R R K + + F Sbjct: 242 ----------AAELQWRISIPLMVLTLTLVAVP--LSRVSPRSGKYSKLLPAIIIYIF-- 287 Query: 319 FWGFSYIIHKI---EQNPYYIPILYLFLFCISSIFLLMIKKKYTKI 361 + F ++ + P++I + ++ + ++ + +L I + K+ Sbjct: 288 YANFMFVSRDAIATGKIPWWIGMWWVHV-AVAILGILFIWRNQVKL 332 >gi|328675790|gb|AEB28465.1| Permease YjgP/YjgQ family protein [Francisella cf. novicida 3523] Length = 360 Score = 116 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 63/357 (17%), Positives = 126/357 (35%), Gaps = 10/357 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 E Y + I +F LFI+ I +++ S ++ + K IP + Sbjct: 2 ILEKYYNKDIVNTFTSITLFIISIVSANLLIRLFQEAYSQGLGIDSIAKFVILTIPENVS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + N E+ + G + + ++K L + L+I I+ + Sbjct: 62 LVAPIAIFLAIIICFGKYFANNEMFVTLAGGITWMQIVKNTLKPVVALTIITLITVMYLN 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR-DT 181 P + T+ A S + + + D I IS + NTL +F+ + Sbjct: 122 PLSKQTLDIYRASLSAKALLSSITDKKIIKAPDGKIIYISNKS-GNTLSDVFLYQNTPQD 180 Query: 182 QTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +K+ A + I D+ A I D ++ K+ + + S K + Sbjct: 181 GEYKVMTAPTAKIVSDKTAAYIDFMDVNIYTKNSQNSEYSHDNAKKAIYTIFDNSDRDYN 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 D+ L N N+ + +++EF R+ + ++ L+++ R Sbjct: 241 HDRVDRLYMHTLIENFND----KDNGTAFKAEFFGRINNAISVIVSSLLALALCRLRPRQ 296 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + K+ P + L+I F + P +I +L + I+K Sbjct: 297 NKYAKLLPSVVVLAIYLCTNM-FINTLMTTGSMPVWIGF-WLPHIFFIIFAVRTIRK 351 >gi|93004884|ref|YP_579321.1| permease YjgP/YjgQ [Psychrobacter cryohalolentis K5] gi|92392562|gb|ABE73837.1| permease YjgP/YjgQ [Psychrobacter cryohalolentis K5] Length = 428 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 52/407 (12%), Positives = 134/407 (32%), Gaps = 57/407 (14%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 + + + + + F+V + ++++ + + + +L I GY +P L ++ P Sbjct: 1 MTQQVASTTALVLGFLVVMMLGGRLIRYFGIAAEGNLDIGLLFTIIGYNLPYFLELILPL 60 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 F + V + + E+ +I+ +G SR L + + L + L + + +P Sbjct: 61 AFFIALMLVFGRLYVDQEMAVINASGVSRGRLGRLMTPLILALFVGEAALSIVGKPWGVR 120 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSRDTQ---- 182 + + + + L F + N F + ++ + + + LQ + ++ S + Sbjct: 121 SSENVWQQQALTSAFDLIRPNQFIS-SGNYHLYVGSLSDDKKQLQDVILIQSEPEKKGSG 179 Query: 183 ----------------------------------------THKIYYAQSGSIDLDR---- 198 I A+ Sbjct: 180 AKNNTAKNSAMDLENNIDVETTEQLNIPELPTALANNNISKDTITLAKRAEQVDTGNSGV 239 Query: 199 QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAND-QNLSFLLNPNPNN 257 + L G + S + + F Y + ++ I + Q + L N Sbjct: 240 TQLDLFQGRRYEVGAGSLKYNQVGFDRYRITLTESSKEVITEDNIETQAIGPLWQAATGN 299 Query: 258 PNY-RPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISF 316 + + E RL+ +I ++++ A R RQ + + +F S+ + Sbjct: 300 AQVGSNNAMRAAQGELGYRLSLPWLMIIAPMLAVPLAQVRP--RQGRWLR-LFPSILLFV 356 Query: 317 GVFWGFSYIIHKIEQ-NPYYIPILYLFL-FCISSIFLLMIKKKYTKI 361 G + + + + + +L L F ++++ + ++ Sbjct: 357 SCALGIISLKNAVGKGSVSVWAYAWLILGFMALALYMNWGSRVQHRL 403 >gi|307250355|ref|ZP_07532304.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306857630|gb|EFM89737.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 360 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 57/366 (15%), Positives = 128/366 (34%), Gaps = 21/366 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E YI + I L + ++I++++ V + S ++P+ Sbjct: 6 MNILERYIGKTIITMVFAVLLMSSGLVFIIKLVEEFKDVGKGSYDALTATYYSLLMLPSD 65 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ +EL+++ ++G SR + V+ AI L +F + Sbjct: 66 IKEFIPVVALIGGLLGLGNLASRSELVVMQSSGFSRFRIGLAVMKTAIPLIVFTMLVSEW 125 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + + + + + F+ D + +I I L + I D Sbjct: 126 GIPQTEQYARNMRS-IAQSGGSMLSTKGGFWAKDGNDFIYIRHIENERKLNNVSIYHFED 184 Query: 181 TQTHKIYYAQSGSIDLDRQAII------LNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + A + + + + L D + + ++KD + Sbjct: 185 KALKSVTQADNAVFNGENWTLQRVQTSSLADNSIQQAKEVNKDWQTT--------ITPSK 236 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + LK ++S L + + + ++ F +++ Q + + L++I Sbjct: 237 LGIVSLKPESLSISGLSD-YVGFLKETGQDSKRFQIAFWRKVYQPISMAVMMLLAISFVF 295 Query: 295 KRALVRQRKKIHPIFISLSISFGVFW---GFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 +R +FI + F + F + P I L L C+S ++ Sbjct: 296 GP--LRSSAMGTKLFIGIIAGFVFYVSNIVFGNMTLVFSWIPVAIGALIPSLICLSIVWW 353 Query: 352 LMIKKK 357 L+ KK+ Sbjct: 354 LLTKKR 359 >gi|189461471|ref|ZP_03010256.1| hypothetical protein BACCOP_02127 [Bacteroides coprocola DSM 17136] gi|189431805|gb|EDV00790.1| hypothetical protein BACCOP_02127 [Bacteroides coprocola DSM 17136] Length = 635 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 86/213 (40%), Gaps = 6/213 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K ++++L+ F + +FI + + + ++ + +N+L + Y T+ Sbjct: 4 IKKLDIFVLKSFLLLFAGTFFICLFIFMMQFLWRYVDELVGKGLEINVLAQFFFYSGLTL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+ P + + ELL + G + +I+PV+ + L F +NI Sbjct: 64 IPLSLPLAILLAALMTFGNFGERYELLSMKAAGIPLLRIIRPVVLFCVFLGGISFFFQNI 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 I P+ + + L + + E +F+ D I + + L+ I I + Sbjct: 124 IGPRAQKQLWTLLVSMKQKSPEVDIPEGVFYSDIDGYNIYVKHKDRKTGLLKDILIYNFS 183 Query: 180 DT-QTHKIYYAQSGSIDLDRQA----IILNDGE 207 D + I +A G ++L + L +GE Sbjct: 184 DGFENAHIIWAAEGKLELTADKQHLFLHLYNGE 216 Score = 37.6 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 45/99 (45%), Gaps = 6/99 (6%) Query: 261 RPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFW 320 + ++RS++HK++T L +IF I A A++R+ P+ IS+ I F +++ Sbjct: 361 TDNSIRSHRSDWHKKITLSLACIIFFFIG---APLGAIIRKGGLGMPVVISVLI-FVIYY 416 Query: 321 GFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMIKKK 357 ++ ++ +L ++ ++ + K Sbjct: 417 IIDSGATRVAKSGEMNIVLGTWMSTIVLAPLGAFFTYKS 455 >gi|94263394|ref|ZP_01287208.1| permease YjgP/YjgQ [delta proteobacterium MLMS-1] gi|93456230|gb|EAT06364.1| permease YjgP/YjgQ [delta proteobacterium MLMS-1] Length = 359 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 50/344 (14%), Positives = 124/344 (36%), Gaps = 10/344 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y++ GR+ ++ I ++ +R++ + ++ IP + Sbjct: 1 MKLLDRYLITSFGRNLATVLGGLLAIYLLVDFFERVDNFLDAGLGTGGAVRYLLLKIPLI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + L +NR EL+ + G S +I+P+L A ++ S Sbjct: 61 IEQLLPVALLLAGIITLGLLNRRHELMALQAAGLSTRRIIRPLLLAAFACTLLGMASSQW 120 Query: 121 IEPKCRSTIKQ-LSAKAQLALTFSYLEENL-FFRLDDDLYIKISKYNPNNTLQGI-FIVD 177 + P S + + + + + ++R + +Y + N L ++ Sbjct: 121 LLPPTMSELNRLWHQEVRQQENRGIERQGRIYYRGQEGIYSFRPAADSENRLADFSYLTW 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS- 236 RD + ++ +A + D + +L +G++ K+ D + F+ L + Sbjct: 181 DRDYRLAQLIFAARAT--WDGRKWLLEEGQLKEKANGDDDFVVDYFERRQLALPEEPADF 238 Query: 237 -TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 +++ LS L + + + P+ + + HK ++F + L+ + Sbjct: 239 FIPPYALSERALSTLFSQATASAD-TPQRRQARLAIQHK--ISYIFLGLPLLLIGIPLLL 295 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL 339 + + + + S + WG + P + Sbjct: 296 AMSRGRGRDLALAIPAASFLAFITWGLWSFGQSLAAAGQLPPFV 339 >gi|293604027|ref|ZP_06686440.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] gi|292817631|gb|EFF76699.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] Length = 369 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 36/243 (14%), Positives = 93/243 (38%), Gaps = 6/243 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ ++ I + ++ + + +++ + + +++L ++ T Sbjct: 1 MSLFKRSVVSEITSHAGVVFSTLLIVWLSVLLVRLLGEAAGGNIGADVVLVLAALSTITA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP + + +T R +E+++ +G S +KPVL +A+ +++ + + Sbjct: 61 LPTILAVSIFIAVLTTVTRNYRESEMVVWFASGLSLADWLKPVLRVAVPVALAVAGLTLV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISK--YNPNNTLQGIFIVDS 178 P I + + + S + F + S+ P + L +F ++ Sbjct: 121 AAPWAYRQIGEYHERFEQRSDLSKVTAGQFAESSGGSRVFFSEDPVTPTDELGNVFARET 180 Query: 179 RDTQTHKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + + A S + + ++L +G + P + +I ++ F Y L+ ES Sbjct: 181 -GPEWLSVLTASSAHSETLPNGDRFLVLGEGHRYDLKPGTPEIRLVHFNKYGLRLESKAG 239 Query: 236 STI 238 Sbjct: 240 GDP 242 >gi|34498371|ref|NP_902586.1| hypothetical protein CV_2916 [Chromobacterium violaceum ATCC 12472] gi|34104225|gb|AAQ60584.1| conserved hypothetical protein [Chromobacterium violaceum ATCC 12472] Length = 358 Score = 116 bits (291), Expect = 6e-24, Method: Composition-based stats. Identities = 50/360 (13%), Positives = 130/360 (36%), Gaps = 4/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YI+ + +S L + L ++ + +L + + + + ++ LIP Sbjct: 1 MKLIHRYIVSTLTQSTLFTLLALLGLYGFFDLLGEVPALGTGNYTAGVMATYVALLIPGH 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + +T + ++E +I +G + + +L + ++ + Sbjct: 61 AYELMPLAVLIGGMVAMTQLASSSEYTVIRTSGVTLKQIAATLLKFGLGFAVLTILLGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SR 179 P ++ A ++ + + + + +I + + P+NTL GI I + Sbjct: 121 AAPWAMQEAERTRLTATHSIVAKEFRSGTWVKDNQN-FINVHEMLPDNTLLGIRIYTYDQ 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 D + + A+ G+ ++ L + + +P ++ + E S ++ Sbjct: 180 DFKLERTRIAERGTFSKQDRSWQLENVKETVLAPNRTISAVYPTLKWKSIVEPEILSVLL 239 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + + LL + + + Y +L L + L+++ ++ Sbjct: 240 VVPEQMSAHNLLT-YIEHLKKNKQQTQRYEIALWSKLFYPLACISMALVALAFTPQQRRH 298 Query: 300 RQRKKIHPIFISLSISF-GVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 Q I L ++F V F ++ + N L +F + I ++ +++ Sbjct: 299 GQLGIKLFAGICLGVTFHFVNRLFGHLGLLYDWNAILSATLPTLIFLLGGIAIIAKQERR 358 >gi|227357023|ref|ZP_03841394.1| inner membrane protein [Proteus mirabilis ATCC 29906] gi|227162826|gb|EEI47786.1| inner membrane protein [Proteus mirabilis ATCC 29906] Length = 343 Score = 116 bits (291), Expect = 6e-24, Method: Composition-based stats. Identities = 51/344 (14%), Positives = 126/344 (36%), Gaps = 21/344 (6%) Query: 24 VFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRN 83 + I + ++++ + N+++ + IP + ++ P + + + Sbjct: 1 MLIFFSQKLVEILGAAVEGNIPTNLVVSLLWLGIPEMAQLILPLSLFLGLLMTYSKLYVE 60 Query: 84 TELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFS 143 +E+ +++ G + L++ L L++L S+ + + P +Q+ A+ + + Sbjct: 61 SEITVMNACGIGKKALVQAALLLSLLTSVLAAGNVVWLIPWSSVHQEQVLEDAKANPSLA 120 Query: 144 YLEENLF-FRLDDDLYIKISKYNPNNTLQGIFIVDSR--DTQTHKIYYAQSGS---IDLD 197 L E F D ++ + + N Q +F+ R Q + A G + Sbjct: 121 ALMEGQFKMSSDRNMVLYLGSV-KGNQFQDVFLAQLRPTQNQRPSVVVADKGYTKELPNG 179 Query: 198 RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNN 257 Q ++L++G + + + +D I F Y S+ + + ++ L + Sbjct: 180 NQVVVLSEGTRYEGTAVLRDFRITDFTDYQAVIGHRESTISRNRVEQKTMNELWHSTEPE 239 Query: 258 PNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFG 317 +EFH RLT VI L+ + RQ + + + L + Sbjct: 240 S----------IAEFHWRLTLIFSVVIMALMVVP--LSEVNPRQGRVLSMLPAML--LYL 285 Query: 318 VFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTKI 361 VF+ + + P++ ++ L ++ + + Sbjct: 286 VFFLLQSSLRSSGEKGKVDPLIAMWTVNGIYFALALLLNAWDTL 329 >gi|325136762|gb|EGC59362.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M0579] Length = 356 Score = 116 bits (291), Expect = 6e-24, Method: Composition-based stats. Identities = 51/365 (13%), Positives = 125/365 (34%), Gaps = 16/365 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +IL + + + +L + +P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGKGSYGIWEMLGYTALKMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + +EL +I +G S L+ + + +I Sbjct: 61 AYELMPLAVLIGGLLSLSQLAAGSELTVIKASGMSTKKLLLILSQFGFIFAIATVALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A A + L+ + + + I + + P++TL GI I D Sbjct: 121 VAPTLSQKAENIKAAAINGKISTGNT-GLWLK-EKNSIINVREMLPDHTLLGIKIWARND 178 Query: 181 TQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + A S ++ D L + ++SI +++ + + ++ Sbjct: 179 KNELAEAVEADSAVLNSDGS-WQLKNIRRSTLGEDKVEVSIAAEENWPISVKRNLMDVLL 237 Query: 240 LKANDQNLSFL---LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 +K + ++ L + NN + Y + ++L + L++ Sbjct: 238 VKPDQMSVGELTTYIRHLQNNS----QNTRIYAIAWWRKLVYPAAAWVMALVAFAF--TP 291 Query: 297 ALVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 R +F + + F + P+ L F + +++L+ Sbjct: 292 QTTRHGNMGLKLFGGICLGLLFHLAGRLFGFTSQLYGIPPFLAGALPTIAFALLAVWLIR 351 Query: 354 IKKKY 358 ++K+ Sbjct: 352 KQEKH 356 >gi|167626384|ref|YP_001676884.1| hypothetical protein Fphi_0162 [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167596385|gb|ABZ86383.1| conserved membrane protein of unknown function [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 360 Score = 116 bits (291), Expect = 6e-24, Method: Composition-based stats. Identities = 66/366 (18%), Positives = 135/366 (36%), Gaps = 28/366 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 E Y + I +F LFI+ I +++ S ++ ++K IP + Sbjct: 2 ILEKYYNKDIVNTFTSITLFIISIVSANLLIRLFQQAYSQGLGIDSIIKFVILTIPGNVS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + N E+ + G + + ++K + L+I F++ I Sbjct: 62 LVAPIAIFLAIVICFGKYFANNEMFVTLAGGVTWMQIVKNTMKPVYALTIITFLTVMYIN 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT- 181 P + T A S + ++ + D I I + NTL+ +F+ + D Sbjct: 122 PLSKQTQDIYQASLTAKALLSSITDDKIIKTTDGKVIYIKSKS-GNTLKDVFLYMATDNS 180 Query: 182 QTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +K+ A + +D+ A + +D ++ K P + +T T TI Sbjct: 181 DEYKVVTAPVAEVIIDKGAAYVDFHDAHIYTKEPKT--------YEHTYDTAKNAIYTI- 231 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETY---------RSEFHKRLTQWLFPVIFGLISI 290 +D++ N + + Y L+E + R EF R+ + ++ L+++ Sbjct: 232 FDTSDRD----YNHDKVDRLYMHTLIENFTDKDDGTVSRGEFFGRINNSISVIVASLLAL 287 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 R + K+ P + L++ F + + P +I L+L Sbjct: 288 ALCRLRPRQNKYAKLLPSVVVLAVYLCSNM-FVNTLMTGGKLPVWIG-LWLPHIFFIIYA 345 Query: 351 LLMIKK 356 + I+K Sbjct: 346 IRTIRK 351 >gi|67924129|ref|ZP_00517574.1| permease YjgP/YjgQ [Crocosphaera watsonii WH 8501] gi|67854019|gb|EAM49333.1| permease YjgP/YjgQ [Crocosphaera watsonii WH 8501] Length = 400 Score = 116 bits (291), Expect = 6e-24, Method: Composition-based stats. Identities = 43/373 (11%), Positives = 129/373 (34%), Gaps = 32/373 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPT 59 + + YI + L S + + + + + V S L +I +P Sbjct: 27 LSLMDRYIATQLINPLLFSVGLVSVLGVAIGYLSDLADKVVDSNLPLIQASEILLLKVPE 86 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 P + T ++ ++EL+ G S LI P + +++L++ F+ Sbjct: 87 FTAYALPISVMLSTLLTYGRLSSDSELIAFRGCGVSLYRLIIPAVVMSLLVTGVTFLVSE 146 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLY------------IKISKYNPN 167 ++ P + + + +++F+ + + + ++ Sbjct: 147 LVVPAANYRATGILVEYLQEEHPYWQNKDIFYPDYEQVVLPNGEKEKQLKHLFFAEKFDG 206 Query: 168 NTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKS-- 225 L+ + +++ + + ++I + S + + + +G +++ +P + F+ Sbjct: 207 QNLKNLTVLEWLENRLNRIVVSDSATWNGQEETWDFFNGTLYKLAPDASYKEADPFEHRQ 266 Query: 226 -------YTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQ 278 + + + + + Q + L + + L T++ ++L Sbjct: 267 LPLSKAAFEFALQGRDPYEMNIIQASQYMRILKMMGDD------KKLRTFQVRIQQKLAF 320 Query: 279 WLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 V+F ++ + + + + +S+ I F + ++I + P+ Sbjct: 321 PFICVVF---GVIGSSLGSTPQNMSRATGFGLSVVIIFAYYLLG-FLIGSLGLMGLISPV 376 Query: 339 LYLFLFCISSIFL 351 L +L I + + Sbjct: 377 LAGWLPNILGLVM 389 >gi|94266928|ref|ZP_01290581.1| permease YjgP/YjgQ [delta proteobacterium MLMS-1] gi|93452380|gb|EAT02999.1| permease YjgP/YjgQ [delta proteobacterium MLMS-1] Length = 359 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 51/344 (14%), Positives = 124/344 (36%), Gaps = 10/344 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y++ GR+ ++ I ++ +R++ + ++ IP + Sbjct: 1 MKLLDRYLITSFGRNLATVLGGLLAIYLLVDFFERVDSFLDAGLGTGGAVRYLLLKIPLI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + L +NR EL+ + G S +I+P+L A ++ S Sbjct: 61 IEQLLPVALLLAGIITLGLLNRRHELMALQAAGLSTRRIIRPLLLAAFACTLLGMASSQW 120 Query: 121 IEPKCRSTIKQ-LSAKAQLALTFSYLEENL-FFRLDDDLYIKISKYNPNNTLQGI-FIVD 177 + P S + + + + + ++R + +Y + N L ++ Sbjct: 121 LLPPTMSELNRLWHQEVRQQENRGIERQGRIYYRGQEGIYSFRPAADSENRLADFSYLTW 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS- 236 RD + ++ +A S D + +L +G++ K+ D + F+ L + Sbjct: 181 DRDYRLAQLIFATRAS--WDGRKWLLEEGQLKEKANGDDDFVVDYFERRQLALPEEPADF 238 Query: 237 -TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 +++ LS L + + + P+ + + HK ++F + L+ + Sbjct: 239 FIPPYALSERALSTLFSQATASAD-TPQRRQARLAIQHK--ISYIFLGLPLLLIGIPLLL 295 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL 339 + + + + S + WG + P + Sbjct: 296 AMSRGRGRDLALAIPAASFLAFITWGLWSFGQSLAAAGQLPPFI 339 >gi|145219259|ref|YP_001129968.1| permease YjgP/YjgQ family protein [Prosthecochloris vibrioformis DSM 265] gi|145205423|gb|ABP36466.1| permease YjgP/YjgQ family protein [Chlorobium phaeovibrioides DSM 265] Length = 360 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 58/353 (16%), Positives = 121/353 (34%), Gaps = 21/353 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI + ++F+ + + V + +I +++ + ++ IP Sbjct: 1 MKILDRYIFQQFVKTFVFTTITFVSLFILINMVENLGDFMDRKLLFTDIVLYYLRAIPDT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + +P + + V + ++EL I + G S L+ P L I++S I+ Sbjct: 61 ILITSPVSSLLASILVAGRLAGSSELPAIRSAGVSMRQLLYPFLLGGIIISTLNIINSFW 120 Query: 121 IEPKC----RSTIKQLSAKAQLALTFS-----YLEENLFFRLDDDLYIKISKYNPNNT-L 170 + P + + K++ +E + I + N + T Sbjct: 121 LAPIAAVHNHAFERDHLGKSRRNGAAEGSNLHIIEPGS-------RVVTIGRLNTSFTGA 173 Query: 171 QGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT 230 + + I + T A+S D + L + R +P ++ S L Sbjct: 174 KEVSIEEFSGTGLRGRIDAESMRYDTGNKEWTLQNAAQRRFTPGGEEYQARPALSLPLSL 233 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 + + + L+ ++ + LE + H ++ +I LI + Sbjct: 234 TLKSLAELNLRPDEMQFIQHWQYLAEKKHAGFAGLERTMVKLHTKIAVPFASLIIILIGV 293 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 A ++ I ISL F +F G I N P+L +L Sbjct: 294 ---PLSAKKKRGGLATEIGISLFAGF-LFLGLQKTIATFGYNGVVNPMLAAWL 342 >gi|172036161|ref|YP_001802662.1| putative permease YjgP/YjgQ [Cyanothece sp. ATCC 51142] gi|171697615|gb|ACB50596.1| putative permease YjgP/YjgQ [Cyanothece sp. ATCC 51142] Length = 401 Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats. Identities = 43/373 (11%), Positives = 130/373 (34%), Gaps = 32/373 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPT 59 + + Y+ + L S + + + + + V S L +I +P Sbjct: 28 LSLMDRYLASQLIGPLLFSVGLVSVLGVAIGYLSDLADKVVDSNLPLIQASEILLLKVPE 87 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 P + T ++ ++EL+ G S LI P + ++++++ F+ Sbjct: 88 FTAYALPISVMLSTLLTYGRLSNDSELIAFRGCGVSLYRLIVPAVVMSLVVTGVTFLVSE 147 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLY------------IKISKYNPN 167 ++ P + + + +++F+ + + + ++ Sbjct: 148 LVVPAANYRATAILVEYLQEEHPYWQNKDIFYPDYEQVVLPNGEKEKRLKHLFFAEQFDG 207 Query: 168 NTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKS-- 225 L+ + +++ + + ++I + S + + + DG +++ +P + F+ Sbjct: 208 QNLKTLTVLEWLEERLNRIVVSDSATWNGQEETWDFFDGTIYQLAPDASYKEAYPFEHRQ 267 Query: 226 -------YTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQ 278 + + + + + Q + L + + L ++ ++L Sbjct: 268 LPLTKAAFEFALQGRDPYEMNIIQARQYMKILKMMGDD------KKLRMFQVRIQQKLAF 321 Query: 279 WLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 V+F +V + ++ +Q + +S+ I F + ++I + P+ Sbjct: 322 PFICVVF---GVVGSALGSMPQQMSRATGFGLSVVIIFSYYLLG-FLIGSLGLMGLISPV 377 Query: 339 LYLFLFCISSIFL 351 L +L I + + Sbjct: 378 LAGWLPNILGLAM 390 >gi|146329237|ref|YP_001210036.1| hypothetical protein DNO_1152 [Dichelobacter nodosus VCS1703A] gi|146232707|gb|ABQ13685.1| conserved hypothetical membrane protein [Dichelobacter nodosus VCS1703A] Length = 349 Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats. Identities = 67/366 (18%), Positives = 134/366 (36%), Gaps = 30/366 (8%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F Y++R I FL + ++ I + ++ + SL + ++ + ++ Sbjct: 5 IFYRYMMREISALFLAITMILLTIIISFRFSSLLSRALDGSVSLAAIGQLLIFQTANIVV 64 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + + L+ + + E+ + G S+ L++P+L+L + L++ L I+ + Sbjct: 65 ILLPVAFILASVMTLSRLYGDCEINALFAGGCSKKHLMQPILYLVLPLAVILVINTLYLL 124 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P QL A+++ +S+ N F L+ + N FI+ D Sbjct: 125 PHVFERWDQLMAQSRQEALYSFFTPNQFQHLNAHNTLYTGDKINNG--FQPFIIIQNDNN 182 Query: 183 THKIYYAQSGSIDLDRQ--AIILNDGE----VHRKSPISKDISIMKFKSYTLQTESANSS 236 + + +++ G I ++ + L G P + S S L ++ Sbjct: 183 EYSMLWSKRGEIQKNQPEHFLHLTQGNRAAWRDDFQPQNCLFSQFAHGSLHLSQSPPSAQ 242 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L+ L R+EF KRL L VIF A Sbjct: 243 QRLRSIATGALNQSLAH---------------RAEFQKRLNPALAVVIFSF----AVPLL 283 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI---EQNPYYIPILYLFLFCISSIFLLM 353 A R R+ + + I FG++ I K+ Q P+ I + I + Sbjct: 284 AHTRPRQGRYQRLLPAFILFGIYINLLDIALKMFSRGQIPFLIGGWGIHFAAAFIIAIYW 343 Query: 354 IKKKYT 359 + + Sbjct: 344 QRARKP 349 >gi|254374090|ref|ZP_04989572.1| permease YjgP/YjgQ family protein [Francisella novicida GA99-3548] gi|151571810|gb|EDN37464.1| permease YjgP/YjgQ family protein [Francisella novicida GA99-3548] Length = 360 Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats. Identities = 62/357 (17%), Positives = 126/357 (35%), Gaps = 10/357 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 E Y + I +F LFI+ I +++ S ++ ++K IP + Sbjct: 2 ILEKYYNKDIVNTFTSITLFIISIVSANLLIRLFQEAYSQGLGIDSIVKFVILTIPENVS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + N E+ + G + + ++K L + L+I I+ + Sbjct: 62 LVAPIAIFLAIVICFGKYFANNEMFVTLAGGITWMQIVKNTLKPVVALTIITLITVMYLN 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR-DT 181 P + T+ A S + + + D I I + NTL +F+ + Sbjct: 122 PLSKQTLDIYKASLSAKALLSSITDQKIIKAPDGKIIYIGNKS-GNTLSDVFLYQNTPQD 180 Query: 182 QTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +K+ A + I D+ A I + ++ K+ + + S K + Sbjct: 181 GEYKVMTAPTAKIVSDKTAAYIDFMNVNIYTKNSQNSEYSYDNAKKAIYTIFDNSDRDYN 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 D+ L N N+ Y++EF R+ + ++ L+++ R Sbjct: 241 HDRVDRLYMHTLIENFND----KANGTAYKAEFFGRINNAISVIVSSLLALALCRLRPRQ 296 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + K+ P + L+I F + P +I +L + + I+K Sbjct: 297 NKYAKLLPSVVVLAIYLCTNM-FINTLMANGSVPVWIGF-WLPHIFFTIFAVRTIRK 351 >gi|32035302|ref|ZP_00135309.1| COG0795: Predicted permeases [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208576|ref|YP_001053801.1| hypothetical protein APL_1104 [Actinobacillus pleuropneumoniae L20] gi|165976526|ref|YP_001652119.1| permease [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|190150429|ref|YP_001968954.1| hypothetical protein APP7_1160 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303250151|ref|ZP_07336353.1| permease [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303253324|ref|ZP_07339473.1| permease [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307248124|ref|ZP_07530152.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307252739|ref|ZP_07534630.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307257155|ref|ZP_07538927.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307261583|ref|ZP_07543251.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307263772|ref|ZP_07545378.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|126097368|gb|ABN74196.1| hypothetical protein APL_1104 [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|165876627|gb|ABY69675.1| predicted permease [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|189915560|gb|ACE61812.1| hypothetical protein APP7_1160 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302648006|gb|EFL78213.1| permease [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302651214|gb|EFL81368.1| permease [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306855301|gb|EFM87476.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306859771|gb|EFM91793.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306864317|gb|EFM96228.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306868706|gb|EFN00515.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306870893|gb|EFN02631.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 360 Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats. Identities = 57/366 (15%), Positives = 128/366 (34%), Gaps = 21/366 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E YI + I L + ++I++++ V + S ++P+ Sbjct: 6 MNILERYIGKTIITMIFAVLLMSSGLVFIIKLVEEFKDVGKGSYDALTATYYSLLMLPSD 65 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ +EL+++ ++G SR + V+ AI L +F + Sbjct: 66 IKEFIPVVALIGGLLGLGNLASRSELVVMQSSGFSRFRIGLAVMKTAIPLIVFTMLVSEW 125 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + + + + + F+ D + +I I L + I D Sbjct: 126 GIPQTEQYARNMRS-IAQSGGSMLSTKGGFWAKDGNDFIYIRHIENERKLNNVSIYHFED 184 Query: 181 TQTHKIYYAQSGSIDLDRQAII------LNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + A + + + + L D + + ++KD + Sbjct: 185 KALKSVTQADNAVFNGENWTLQRVQTSSLADNSIQQAKEVNKDWQTT--------ITPSK 236 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + LK ++S L + + + ++ F +++ Q + + L++I Sbjct: 237 LGIVSLKPESLSISGLSD-YVGFLKETGQDSKRFQIAFWRKVYQPISMAVMMLLAISFVF 295 Query: 295 KRALVRQRKKIHPIFISLSISFGVFW---GFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 +R +FI + F + F + P I L L C+S ++ Sbjct: 296 GP--LRSSAMGTKLFIGIIAGFVFYVSNIVFGNMTLVFSWIPVAIGALIPSLICLSIVWW 353 Query: 352 LMIKKK 357 L+ KK+ Sbjct: 354 LLTKKR 359 >gi|325917726|ref|ZP_08179914.1| putative permease [Xanthomonas vesicatoria ATCC 35937] gi|325536055|gb|EGD07863.1| putative permease [Xanthomonas vesicatoria ATCC 35937] Length = 360 Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats. Identities = 53/358 (14%), Positives = 126/358 (35%), Gaps = 19/358 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L +SFL + + ++ ++ ++ + ++ +LL G Sbjct: 1 MPKLDRYLLSDFTQSFLATLIVLLVVSVGGVLVDILGNIADGRIPARLLLSQVGLQFVAY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP++ P + L + R++E+ +I G +++P+L L + + I + + Sbjct: 61 LPIILPLALMLGLLLALARLYRDSEMAVITAIGVGPKRMLRPMLMLVVPVVIIIGLCSLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSR 179 + P T + + A ++ + LE F L + ++ + + L +F+ + Sbjct: 121 LGPWASRTAETMLEDANRSVLMAGLESGKFTPLSGGGVVYLTTISADGKNLGKVFMQ-RQ 179 Query: 180 DTQTHKIYYAQSGSI---DLDRQAIILNDGEVHRK--SPISKDISIMKFKSYTLQTESAN 234 + A+ G++ + + L DG + + D +MKF S + Sbjct: 180 KDDRLDVVTAERGAMFFEGKTDRYLRLEDGYRIEGPAAGDTLDYRLMKFASNDVALPDRT 239 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + + LL+ + R++ H+RL L + Sbjct: 240 RTHDANDPEVMWTTQLLS----------DERPAARAQLHERLAPPLL--ALAFALLTLPL 287 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 R+ RQ++ + L+ G L+ + ++ + Sbjct: 288 SRSAPRQQRYGRIMLAFLAYMVGTNLMIVGTQWIANGKTPAALGLWWLTLPLLAVAVW 345 >gi|317401899|gb|EFV82506.1| permease [Achromobacter xylosoxidans C54] Length = 385 Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats. Identities = 37/244 (15%), Positives = 95/244 (38%), Gaps = 6/244 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ ++ I + ++ + + +++ + + +++L ++ T Sbjct: 20 MSLFKRSVVSEITSHAGVVFSTLLIVWLSVLLVRLLGEAAGGNIGADVVLVLAALSTITA 79 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP + + +T R +E+++ +G S +KPVL +A+ ++I + + Sbjct: 80 LPTILAVSVFIAVLTTVTRNYRESEMVVWFASGLSLADWLKPVLRVAVPVAIAVAGLTLV 139 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKY--NPNNTLQGIFIVDS 178 P I + + + S + F + ++ P + L +F ++ Sbjct: 140 AAPWAYRQIGEYHERFEQRSDLSKVTAGQFAESAGGNRVFFAEDPAKPTDELGNVFARET 199 Query: 179 RDTQTHKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + + A S + + ++L +G + P + +I ++ F+ Y L+ ES Sbjct: 200 -GPEWLSVLTASSAHSETLPNGDRFLVLGEGHRYDLKPGTPEIRLVHFEKYGLRLESKGG 258 Query: 236 STIV 239 V Sbjct: 259 DDPV 262 >gi|188994506|ref|YP_001928758.1| hypothetical protein PGN_0642 [Porphyromonas gingivalis ATCC 33277] gi|188594186|dbj|BAG33161.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC 33277] Length = 651 Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats. Identities = 42/215 (19%), Positives = 88/215 (40%), Gaps = 6/215 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K L++L+ LM+ F+ + + + ++ + S IL K+ Y T++ Sbjct: 7 KRLYLFMLQTFLPLLLMTFAICWFVVLMQFLWKYVDDMVGKGLSAIILSKMLFYAAMTLV 66 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PM P + + ++ ELL + + G ++KP+ F + ++ LFI +N + Sbjct: 67 PMALPLGVLLASLMTFGNLGERLELLAMKSAGVPLYRIMKPLFFSVVAIACGLFIFQNDL 126 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSRD 180 + + + A+ A + E F+ + ++K + L + I D Sbjct: 127 MIQSQVKFYTILFSARRATPELEIPEGSFYNGIHGYNLFVAKKDRRTGMLHDMMIYDHSQ 186 Query: 181 T-QTHKIYYAQSGSIDLDRQ----AIILNDGEVHR 210 +I A SG + +D ++L+ GE + Sbjct: 187 GFADARIIVADSGKLKMDEGKTFLTLMLHSGETFQ 221 Score = 39.6 bits (91), Expect = 0.77, Method: Composition-based stats. Identities = 17/124 (13%), Positives = 47/124 (37%), Gaps = 5/124 (4%) Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + ++++ D + + + R + R E+H + T +PV + + A Sbjct: 351 EARSVMINRFDTYIGECMIMKESTAFERDRRISHMR-EWHTKFT---YPVACLIFFFIGA 406 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFLL 352 A++R+ PI S+ + ++ + + + + + ++L F + Sbjct: 407 PLGAIIRKGGLGTPIVASVLFFVLYYMVDTFGVKMAKTEEWPVWLGMWLSTFVLVPFGFF 466 Query: 353 MIKK 356 + K Sbjct: 467 LTYK 470 >gi|118497255|ref|YP_898305.1| membrane protein of unknown function [Francisella tularensis subsp. novicida U112] gi|194323557|ref|ZP_03057334.1| putative permease, YjgP/YjgQ family [Francisella tularensis subsp. novicida FTE] gi|208779048|ref|ZP_03246394.1| putative permease, YjgP/YjgQ family [Francisella novicida FTG] gi|254372628|ref|ZP_04988117.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. novicida GA99-3549] gi|118423161|gb|ABK89551.1| conserved membrane protein of unknown function [Francisella novicida U112] gi|151570355|gb|EDN36009.1| permease YjgP/YjgQ family protein [Francisella novicida GA99-3549] gi|194322412|gb|EDX19893.1| putative permease, YjgP/YjgQ family [Francisella tularensis subsp. novicida FTE] gi|208744848|gb|EDZ91146.1| putative permease, YjgP/YjgQ family [Francisella novicida FTG] Length = 360 Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats. Identities = 62/357 (17%), Positives = 126/357 (35%), Gaps = 10/357 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 E Y + I +F LFI+ I +++ S ++ ++K IP + Sbjct: 2 ILEKYYNKDIVNTFTSITLFIISIVSANLLIRLFQEAYSQGLGIDSIVKFVILTIPENVS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + N E+ + G + + ++K L + L+I I+ + Sbjct: 62 LVAPIAIFLAIVICFGKYFANNEMFVTLAGGITWMQIVKNTLKPVVALTIITLITVMYLN 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR-DT 181 P + T+ A S + + + D I I + NTL +F+ + Sbjct: 122 PLSKQTLDIYRASLSAKALLSSITDQKIIKAPDGKIIYIGNKS-GNTLSDVFLYQNTPQD 180 Query: 182 QTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +K+ A + I D+ A I + ++ K+ + + S K + Sbjct: 181 GEYKVMTAPTAKIVSDKTAAYIDFMNVNIYTKNSQNSEYSYDNAKKAIYTIFDNSDRDYN 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 D+ L N N+ Y++EF R+ + ++ L+++ R Sbjct: 241 HDRVDRLYMHTLIENFND----KTNGTAYKAEFFGRINNAISVIVSSLLALALCRLRPRQ 296 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + K+ P + L+I F + P +I +L + + I+K Sbjct: 297 NKYAKLLPSVVVLAIYLCTNM-FINTLMANGSVPVWIGF-WLPHIFFTIFAVRTIRK 351 >gi|34540406|ref|NP_904885.1| hypothetical protein PG0598 [Porphyromonas gingivalis W83] gi|34396719|gb|AAQ65784.1| hypothetical protein PG_0598 [Porphyromonas gingivalis W83] Length = 651 Score = 116 bits (290), Expect = 8e-24, Method: Composition-based stats. Identities = 42/215 (19%), Positives = 88/215 (40%), Gaps = 6/215 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K L++L+ LM+ F+ + + + ++ + S IL K+ Y T++ Sbjct: 7 KRLYLFMLQTFLPLLLMTFAICWFVVLMQFLWKYVDDMVGKGLSAIILSKMLFYAAMTLV 66 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PM P + + ++ ELL + + G ++KP+ F + ++ LFI +N + Sbjct: 67 PMALPLGVLLASLMTFGNLGERLELLAMKSAGVPLYRIMKPLFFSVVAIACGLFIFQNDL 126 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSRD 180 + + + A+ A + E F+ + ++K + L + I D Sbjct: 127 MIQSQVKFYTILFSARRATPELEIPEGSFYNGIRGYNLFVAKKDRRTGMLHDMMIYDHSQ 186 Query: 181 T-QTHKIYYAQSGSIDLDRQ----AIILNDGEVHR 210 +I A SG + +D ++L+ GE + Sbjct: 187 GFADARIIVADSGKLKMDEGKTFLTLMLHSGETFQ 221 Score = 39.6 bits (91), Expect = 0.79, Method: Composition-based stats. Identities = 17/124 (13%), Positives = 47/124 (37%), Gaps = 5/124 (4%) Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + ++++ D + + + R + R E+H + T +PV + + A Sbjct: 351 EARSVMINRFDTYIGECMIMKESTAFERDRRISHMR-EWHTKFT---YPVACLIFFFIGA 406 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFLL 352 A++R+ PI S+ + ++ + + + + + ++L F + Sbjct: 407 PLGAIIRKGGLGTPIVASVLFFVLYYMVDTFGVKMAKTEEWPVWLGMWLSTFVLVPFGFF 466 Query: 353 MIKK 356 + K Sbjct: 467 LTYK 470 >gi|271498968|ref|YP_003331993.1| permease YjgP/YjgQ family protein [Dickeya dadantii Ech586] gi|270342523|gb|ACZ75288.1| permease YjgP/YjgQ family protein [Dickeya dadantii Ech586] Length = 372 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 52/367 (14%), Positives = 132/367 (35%), Gaps = 25/367 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETFKSQVAILFILLLIFFCQKLVRILGAAVDGDIPTNLVLSLLGLGVPQMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ G S+ L+K L LA+L + + + Sbjct: 62 LILPLSLFLGLLMTFGRLYAESEITVMHACGLSKNVLLKAALVLALLTASLATANVLWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RD 180 P ++ A+A+ + L E F + D + + +F+ R+ Sbjct: 122 PWSSRHQDEVLAEARANPGMASLAEGQFQQTQDGNSVLFVGKVNGGDFERVFLAQLHPRE 181 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A G++ Q + L+ G + + + +D I F +Y + Sbjct: 182 NTRPSVVVADKGTVAARGDGSQVVTLSKGTRYEGTAMLRDFRITDFINYQAIVGYQQVAV 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L + R+EFH RLT ++ ++ + Sbjct: 242 DPTNVEQMSFKTLWRSSD----------IAARAEFHWRLTLIFSVLMMAVMVVP--LSVV 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---YIPILYLFLFCISSIFLLMI 354 RQ + +S+ + ++ F + + N P+++++L + + L ++ Sbjct: 290 NPRQGR-----VLSMLPAMLLYLVFFLLQSSLRSNAGKGKLDPMVWMWLTNLVYLSLAVL 344 Query: 355 KKKYTKI 361 + + Sbjct: 345 LNLWDSV 351 >gi|253997572|ref|YP_003049636.1| permease [Methylotenera mobilis JLW8] gi|253984251|gb|ACT49109.1| permease YjgP/YjgQ family protein [Methylotenera mobilis JLW8] Length = 356 Score = 115 bits (289), Expect = 9e-24, Method: Composition-based stats. Identities = 53/360 (14%), Positives = 139/360 (38%), Gaps = 18/360 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+ + I + L+ L ++ + ++Q + + + L+ +L P Sbjct: 1 MKIITRYLFKEITVNVLLITLALIAMFSFFDLIQELESLGHGSYGLSKILLFVALSAPGH 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + L + R +EL+++ +G S +L ++ + +L ++ F+ + Sbjct: 61 VYEVMPVAVLVGCMYSLGQLARYSELIVLRVSGISLYSLAATLIKIGMLFTVITFLIGEL 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P +++ KA ++ + L+ + D ++ + + + TL I I + D Sbjct: 121 ITPLSEKMAQRIRIKATDSVIVQDFKSGLWVK-DGHSFVNVEEVLADTTLLNIHIYEFDD 179 Query: 181 TQTHKIYY-AQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL--QTESANSST 237 + A G + ++ + + ++ + KD + ++ Sbjct: 180 KFNLRTVSHAHKGLYEDEQWHL-----KSVSQTHLDKDSNHVEHLDKATWRSLIRPELLN 234 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 ++L ++ ++ L ++ + Y+ +L L ++ ++++ A Sbjct: 235 VLLVLPEKMSAWNLYAYIDHLAANKQKTTRYKMALWAKLVYPLASLVMVILALPFA---- 290 Query: 298 LVRQRKKIHPIFISLSISFGVFWG-----FSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 ++QR I + I G+ + F ++ + P + I LF + + +L Sbjct: 291 FIQQRATGASTKIFIGIMLGILYQTLNQTFVHLGLLNDWAPAFSAITPTALFLLGGLAML 350 >gi|161870426|ref|YP_001599598.1| hypothetical protein NMCC_1474 [Neisseria meningitidis 053442] gi|254805326|ref|YP_003083547.1| putative permease [Neisseria meningitidis alpha14] gi|161595979|gb|ABX73639.1| conserved hypothetical integral membrane protein [Neisseria meningitidis 053442] gi|254668868|emb|CBA06970.1| putative permease [Neisseria meningitidis alpha14] Length = 356 Score = 115 bits (289), Expect = 9e-24, Method: Composition-based stats. Identities = 50/367 (13%), Positives = 124/367 (33%), Gaps = 18/367 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +IL + + + +L + +P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGKGSYGIWEMLGYTALKMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + +EL +I +G S L+ + + +I Sbjct: 61 AYELMPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLILSQFGFIFAIATVALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A A + ++ + + + I + + P++TL GI I D Sbjct: 121 VAPTLSQKAENIKAAAINGKISTGNT-GIWLK-EKNSIINVREMLPDHTLLGIKIWARND 178 Query: 181 TQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + A S ++ D L + ++SI +++ + + ++ Sbjct: 179 KNELAEAVEADSAVLNSDGS-WQLKNIRRSTLGEDKVEVSIAAEENWPISVKRNLMDVLL 237 Query: 240 LKANDQNLSFL---LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 +K + ++ L + NN + Y + ++L + L++ Sbjct: 238 VKPDQMSVGELTTYIRHLQNNS----QNTRIYAIAWWRKLVYPAAAWVMALVAFAF--TP 291 Query: 297 ALVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 R +F + + F + P+ L F + ++ + Sbjct: 292 QTTRHGNMGLKLFGGICLGLLFHLAGRLFGFTSQLYGIPPFLAGALPTIAFALLAV--WL 349 Query: 354 IKKKYTK 360 I+K+ + Sbjct: 350 IRKQEKR 356 >gi|307246020|ref|ZP_07528102.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307255001|ref|ZP_07536819.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307259437|ref|ZP_07541162.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306852955|gb|EFM85178.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306861874|gb|EFM93850.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306866373|gb|EFM98236.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 360 Score = 115 bits (289), Expect = 9e-24, Method: Composition-based stats. Identities = 57/366 (15%), Positives = 128/366 (34%), Gaps = 21/366 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E YI + I L + ++I++++ V + S ++P+ Sbjct: 6 MNILERYIGKTIIAMIFAVLLMSSGLVFIIKLVEEFKDVGKGSYDALTATYYSLLMLPSD 65 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ +EL+++ ++G SR + V+ AI L +F + Sbjct: 66 IKEFIPVVALIGGLLGLGNLASRSELVVMQSSGFSRFRIGLAVMKTAIPLIVFTMLVSEW 125 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + + + + + F+ D + +I I L + I D Sbjct: 126 GIPQTEQYARNMRS-IAQSGGSMLSTKGGFWAKDGNDFIYIRHIENERKLNNVSIYHFED 184 Query: 181 TQTHKIYYAQSGSIDLDRQAII------LNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + A + + + + L D + + ++KD + Sbjct: 185 KALKSVTQADNAVFNGENWTLQRVQTSSLADNSIQQAKEVNKDWQTT--------ITPSK 236 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + LK ++S L + + + ++ F +++ Q + + L++I Sbjct: 237 LGIVSLKPESLSISGLSD-YVGFLKETGQDSKRFQIAFWRKVYQPISMAVMMLLAISFVF 295 Query: 295 KRALVRQRKKIHPIFISLSISFGVFW---GFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 +R +FI + F + F + P I L L C+S ++ Sbjct: 296 GP--LRSSAMGTKLFIGIIAGFVFYVSNIVFGNMTLVFSWIPVAIGALIPSLICLSIVWW 353 Query: 352 LMIKKK 357 L+ KK+ Sbjct: 354 LLTKKR 359 >gi|121635228|ref|YP_975473.1| hypothetical protein NMC1491 [Neisseria meningitidis FAM18] gi|120866934|emb|CAM10694.1| conserved hypothetical integral membrane protein [Neisseria meningitidis FAM18] gi|261392197|emb|CAX49711.1| conserved hypothetical integral membrane protein [Neisseria meningitidis 8013] gi|325142744|gb|EGC65119.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis 961-5945] Length = 356 Score = 115 bits (289), Expect = 9e-24, Method: Composition-based stats. Identities = 50/367 (13%), Positives = 124/367 (33%), Gaps = 18/367 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +IL + + + +L + +P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGKGSYGIWEMLGYTALKMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + +EL +I +G S L+ + + +I Sbjct: 61 AYELMPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLILSQFGFIFAIATVALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A A + ++ + + + I + + P++TL GI I D Sbjct: 121 VAPTLSQKAENIKAAAINGKISTGNT-GIWLK-EKNSIINVREMLPDHTLLGIKIWARND 178 Query: 181 TQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + A S ++ D L + ++SI +++ + + ++ Sbjct: 179 KNELAEAVEADSAVLNSDGS-WQLKNIRRSTLGEDKVEVSIAAEENWPISVKRNLMDVLL 237 Query: 240 LKANDQNLSFL---LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 +K + ++ L + NN + Y + ++L + L++ Sbjct: 238 VKPDQMSVGELTTYIRHLQNNS----QNTRIYAIAWWRKLVYPAAAWVMALVAFAF--TP 291 Query: 297 ALVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 R +F + + F + P+ L F + ++ + Sbjct: 292 QTTRHGNMGLKLFGGICLGLLFHLAGRFFGFTSQLYGIPPFLAGALPTIAFALLAV--WL 349 Query: 354 IKKKYTK 360 I+K+ + Sbjct: 350 IRKQEKR 356 >gi|42526553|ref|NP_971651.1| hypothetical protein TDE1043 [Treponema denticola ATCC 35405] gi|41816746|gb|AAS11532.1| membrane protein, putative [Treponema denticola ATCC 35405] gi|325473491|gb|EGC76686.1| membrane protein [Treponema denticola F0402] Length = 377 Score = 115 bits (289), Expect = 9e-24, Method: Composition-based stats. Identities = 60/371 (16%), Positives = 136/371 (36%), Gaps = 18/371 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K+ +Y+ + + F++S LF FI +V QIL + S +L + Y +P ++ Sbjct: 9 KTIFVYVFKELLLYFIVSFLFFFFIFFVNQILLMAEEILSKKAPTKDVLLLLFYSLPFII 68 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P+ + T L + + E + ++ G S ++ PV L + +S+ FI+ +I+ Sbjct: 69 ATTAPYAALIGTLMCLGRFSADHEFISMNALGISTSFILIPVFALGVFVSVGSFITNDIL 128 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ ++ + LE R ++ I +S +N++ + I+DS Sbjct: 129 IPRGTIKFNEVLYNIASSTPALELESYSVKRNEN--SIVVSGLIKDNSIHDLLIIDSSQR 186 Query: 182 QTHKIYYAQSGSIDLDRQ-----AIILNDGEVHRKSPISKD-ISIMKFKSYTLQTESAN- 234 + + + + + + + ++ ++ +S T + + Sbjct: 187 GAKRFLSSSQTDVKKSNDRSIIMQLEMLNPRLLNLDLNNRSKFDVVYGESITYNVLAKDV 246 Query: 235 -----SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 SS+ K +L + + P LL Y E H++ + F L++ Sbjct: 247 APKFISSSGPDKMTSYDLIKDIKQKKEAGDTSPRLLNIYIMELHRKFSVPFGAFFFVLLA 306 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY----LFLFC 345 + Q + + G + + N +++ L + C Sbjct: 307 FAISRAGKTYDQSTGFIVGLLISVAYWAFLIGGQMLCLESGLNINGALVMWFPNVLLVIC 366 Query: 346 ISSIFLLMIKK 356 + I + + K Sbjct: 367 TAVIAIKRLLK 377 >gi|237741964|ref|ZP_04572445.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13] gi|229429612|gb|EEO39824.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13] Length = 363 Score = 115 bits (289), Expect = 1e-23, Method: Composition-based stats. Identities = 54/366 (14%), Positives = 128/366 (34%), Gaps = 17/366 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K ++YI + + FLM+ + + + + Q + I ++ + + L+P + Sbjct: 2 IKKMDMYISKYFIKFFLMNIIGFMGVFLLAQTFKIIKYINQGKLAGGEIFDYILNLLPKM 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 P + ++ M N E++ + +G + +++ L +A ++S+ +F N Sbjct: 62 FVETAPLSVLLAGLITVSIMASNLEIVSLKTSGIRFLRIVRAPLIIAFVISLIVFFINNS 121 Query: 121 IEPKCRSTIK-QLSAKAQLALTFSYLEENL-FFRLDDDLYIKISKYNPNNTLQ---GIFI 175 I K + I + +L +EN F D + K N + + Sbjct: 122 IYTKSLAKINFYRRGEVDESLKLPTTKENAFFINNTDGYLYLMGKINRETGMAENIEVIK 181 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 +++ ++ +I A+S D+D I ++ ++ + Y + Sbjct: 182 FETQISKPKEIITAKSAKFDIDENKWIFSNVNIYNVDTK----ETVTKTEYKSDLYKDDP 237 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYR---PELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 S + + + + + E Y +E KR + I I + A Sbjct: 238 SNFIRASAEDPRMLTIKELKKTIKEQKNIGEDTRIYLAELAKRYSFPFASFIVAFIGLSA 297 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIF 350 VR + + I + +G + S + N P + ++ I Sbjct: 298 --SSKYVRGGRTTMNLVICVVAGYGYYLV-SGAFEAMSLNGIVNPFVASWIPNILYLIIG 354 Query: 351 LLMIKK 356 + + + Sbjct: 355 IYFMNR 360 >gi|77919519|ref|YP_357334.1| hypothetical protein Pcar_1923 [Pelobacter carbinolicus DSM 2380] gi|77545602|gb|ABA89164.1| conserved hypothetical membrane protein [Pelobacter carbinolicus DSM 2380] Length = 362 Score = 115 bits (289), Expect = 1e-23, Method: Composition-based stats. Identities = 53/363 (14%), Positives = 125/363 (34%), Gaps = 20/363 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + YIL R F ++ + +++ +RI+ S+ + + P ++ Sbjct: 4 LYSRYILATFFRLFGLAIGAFAGLYLLVEFFERIDDFIEYHASVTLCVAYFLNKTPLIIT 63 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 V P M L R+ EL+ + G S + P+L + +L S+ + + +I Sbjct: 64 QVAPLACLMAVFMTLGGFTRSGELVAMHAGGISLAKIAAPMLRMGLLFSLIILAANEVIV 123 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDT 181 P + + + +++ + + + I + P TL+GI ++ D Sbjct: 124 PPSIQRARHILTTEVRGGPAVHYKQDKIWLRHNRSILNIRQIEPVQQTLKGITLLSF-DK 182 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 +GS D R S ++ + + + E K Sbjct: 183 NFRIQQRFDAGSAVYSGGRWYCQDAVTRRFDTTSGNL--LTEQRLAEKIEDLPVVPEDFK 240 Query: 242 ------ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 D +S + ++ + H R+ ++ + I A + Sbjct: 241 VPGSKRNEDLPISE-FHRLGKKLKREGYNPTRFQVDMHARIAAPFGCLMMTFLGIPFAIR 299 Query: 296 RALVRQRKKIHPIFISLSISFG-VFWGFSYIIHKIEQNPYYIPILYLF----LFCISSIF 350 + R + I++S++ G +++ + + + + PI+ + LF + + Sbjct: 300 ----KGRGASMALGIAISVAIGALYFILNATLLAFGYSGTFPPIIAAWSANILFLLFGTW 355 Query: 351 LLM 353 L + Sbjct: 356 LFL 358 >gi|62260254|gb|AAX77892.1| unknown protein [synthetic construct] Length = 395 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 63/357 (17%), Positives = 127/357 (35%), Gaps = 10/357 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 E Y + I +F LFI+ I +++ S ++ ++K IP + Sbjct: 28 ILEKYYNKDIVNTFTSITLFIISIVSANLLIRLFQEAYSQGLGIDSIVKFVILTIPENVS 87 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + N E+ + G + + ++K L + L+I I+ + Sbjct: 88 LVAPIAIFLAIVICFGKYFANNEMFVTIAGGITWMQIVKNTLKPVVALTIITLITVMYLN 147 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR-DT 181 P + T+ A S + + + D I I + NTL +F+ + Sbjct: 148 PLSKQTLDIYRASLSAKALLSSITDQKIIKAPDGKIIYIGNKS-GNTLSDVFLYQNTPQD 206 Query: 182 QTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +K+ A + I D+ A I + ++ K+ + + S K + Sbjct: 207 GEYKVMTAPTAKIVSDKTAAYIDFMNVNIYTKNSQNSEYSYDNAKKAIYTIFDNSDRDYN 266 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 D+ L N N+ N Y++EF R+ + ++ L+++ R Sbjct: 267 HDRVDRLYMHTLIENFNDKN----NGTAYKAEFLGRINNAISVIVSSLLALALCRLRPRQ 322 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + K+ P + L+I F + P +I +L + + I+K Sbjct: 323 NKYAKLLPSVVVLAIYLCTNM-FINTLMANSSVPVWIGF-WLPHIFFTIFAVRTIRK 377 >gi|310778172|ref|YP_003966505.1| permease YjgP/YjgQ family protein [Ilyobacter polytropus DSM 2926] gi|309747495|gb|ADO82157.1| permease YjgP/YjgQ family protein [Ilyobacter polytropus DSM 2926] Length = 358 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 48/357 (13%), Positives = 116/357 (32%), Gaps = 13/357 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI +S ++S + I + Q+ + I V+ + L+P + Sbjct: 1 MKKIDRYITMNFIKSIVLSLFGFINIFILSQLFKVIRYVTEGRFGGVDAIYYIISLLPDI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + + M + E++ + +G S +I + +A ++S ++ + Sbjct: 61 IIKVMPLAVLLGGLMTINKMASSLEIIALKTSGISFKRIITFPILIAFIISCGVYYMNDK 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIK---ISKYNPNNTLQGIFIVD 177 I P+ +++ + + F R D+ I++ I +D Sbjct: 121 IYPESIKKSREIKRGGYEDMELPESRKKAFLRGKDNYVYYAESINRITSTAVNIEILELD 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 S + KI A+ G + + + V+ S ++ + E Sbjct: 181 SEFEKLTKIITAEKGIYHRENKLWKFENVTVNNLEKKS-SYTLPVMQDVRYDDEPERFLA 239 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + + + E E R + + + + Sbjct: 240 PSVNPKLLTIKEMRSTLGAIKQTGGNSREIL-MELGDRTSFSFASFVVSFLGLSLG---- 294 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R + + +++S+ G YI+ + +++ F+ L +I Sbjct: 295 -SRYVRGASAVSVAMSVGLGYS---YYIVQASMEAISMGGVIHPFIGAWIPNILFLI 347 >gi|91203264|emb|CAJ72903.1| hypothetical protein kustd2158 [Candidatus Kuenenia stuttgartiensis] Length = 357 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 62/363 (17%), Positives = 127/363 (34%), Gaps = 25/363 (6%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTE-SLNILLKISGYLIPTV 60 + Y+L+ +F + L I +I +LQ+++ S + + YL P + Sbjct: 3 SRLDRYLLKAFFPTFFLCLLIISGTYVIIDLLQKLDDFLEMGINSFGVASRYYAYLFPVI 62 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + VL ++RN E+L + G S ++ P+ + + + F + Sbjct: 63 ITQFFPAITLVAVGIVLVRLSRNKEILAMQVAGISLYRILLPIFVVTVFMGFASFGDQEW 122 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKY-NPNNTLQGIFIVDSR 179 I P+ ++ + + L L +++ I+I KY N + +FI+ Sbjct: 123 IVPRFAEKLEAMQQNTFDSDVQRNL---LVHDDENNALIRIWKYSNKTQKMDSVFILSRD 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK------DISIMKFKSYTLQTESA 233 + + + + +L+ H + + ++F S E Sbjct: 180 ENGKKRFTLNAKKAEWIGNNTWVLSKILKHVYDERGRWVAPVHRLDTLEFVSSVTPLELG 239 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + + L+ L P+NP + FH R+ L ++ + I Sbjct: 240 KKKLDSSLLSLEQLNELCEKEPDNPKNKVL--------FHSRIAYTLTHIVLLFLGIPLV 291 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI----LYLFLFCISSI 349 R K I ++ GVF+ S+I + P+ + + LF I Sbjct: 292 VG--FERMSKNIFLRVSLCILACGVFYAVSFICSNLGNTGMVHPVLAAWMPIVLFGSVGI 349 Query: 350 FLL 352 F Sbjct: 350 FFF 352 >gi|298369120|ref|ZP_06980438.1| permease, YjgP/YjgQ family [Neisseria sp. oral taxon 014 str. F0314] gi|298283123|gb|EFI24610.1| permease, YjgP/YjgQ family [Neisseria sp. oral taxon 014 str. F0314] Length = 356 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 43/361 (11%), Positives = 127/361 (35%), Gaps = 8/361 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YI+R + + + L + + +++ + V + + +++ +P Sbjct: 1 MKLIPRYIIRQMSVMAVYALLAFLALYSFFEVINEMGDVGKGSYTGAKMVQYVLMQMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + +EL +I +G S L+ + ++ ++ + Sbjct: 61 AYELMPLGVLIGGLIALSQLASGSELTVIKASGMSTKRLLAVLSQFGLIFALATVVLGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A A + L+ + +++ I + + P++TL G+ I D Sbjct: 121 VAPDLSRRAENMKASAINGRISAG-ASGLWMKEQNNI-INVREMLPDHTLLGVKIWQHDD 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + L + +S + + + +S +++ Sbjct: 179 RYQLASAAEAESAALNPDGSWQLKNVSRSVLKGEQVAVSSESSQRWPVALQSGLLDVLLV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + ++S L + + +TY + ++L + + L++ R Sbjct: 239 DPDQMSVSELTT-YIAHLKSNHQKTDTYSVAWWRKLMYPIAAWVMALVAFAF--TPQTTR 295 Query: 301 QRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 +F + + + F + P+ +L +F + +++L+ +++ Sbjct: 296 HGNMGLKLFGGICLGLVFHFAGRLFGFTSQLYSVPPFLAGMLPTVIFALLAVYLIRRQER 355 Query: 358 Y 358 Sbjct: 356 R 356 >gi|218768539|ref|YP_002343051.1| hypothetical protein NMA1760 [Neisseria meningitidis Z2491] gi|121052547|emb|CAM08887.1| conserved hypothetical integral membrane protein [Neisseria meningitidis Z2491] gi|319410788|emb|CBY91173.1| conserved hypothetical integral membrane protein [Neisseria meningitidis WUE 2594] gi|325128630|gb|EGC51499.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis N1568] gi|325144869|gb|EGC67157.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M01-240013] Length = 356 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 51/367 (13%), Positives = 124/367 (33%), Gaps = 18/367 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +IL + + + +L + +P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGKGSYGIWEMLGYTALKMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + +EL +I +G S L+ + + +I Sbjct: 61 AYELMPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLILSQFGFIFAIATVALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A A + L+ + + + I + + P++TL GI I D Sbjct: 121 VAPTLSQKAENIKAAAINGKISTGNT-GLWLK-EKNSIINVREMLPDHTLLGIKIWARND 178 Query: 181 TQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + A S ++ D L + ++SI +++ + + ++ Sbjct: 179 KNELAEAVEADSAVLNSDGS-WQLKNIRRSTLGEDKVEVSIAAEENWPISVKRNLMDVLL 237 Query: 240 LKANDQNLSFL---LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 +K + ++ L + NN + Y + ++L + L++ Sbjct: 238 VKPDQMSVGELTTYIRHLQNNS----QNTRIYAIAWWRKLVYPAAAWVMALVAFAF--TP 291 Query: 297 ALVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 R +F + + F + P+ L F + ++ + Sbjct: 292 QTTRHGNMGLKLFGGICLGLLFHLAGRLFGFTSQLYGIPPFLAGALPTIAFALLAV--WL 349 Query: 354 IKKKYTK 360 I+K+ + Sbjct: 350 IRKQEKR 356 >gi|327405435|ref|YP_004346273.1| permease YjgP/YjgQ family protein [Fluviicola taffensis DSM 16823] gi|327320943|gb|AEA45435.1| permease YjgP/YjgQ family protein [Fluviicola taffensis DSM 16823] Length = 495 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 46/253 (18%), Positives = 99/253 (39%), Gaps = 7/253 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQ-RINLVSSSTESLNILLKISGYLIPT 59 MK ++ ++ G F + FI + ++Q I+ + + +++++ Y+ Sbjct: 1 MKKLTVFSIKSFGGPF-VVTFFISMVMLIMQFTWVYIDDLMGKGLGVAVIIELMFYVSAG 59 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++P+ P + + L ++ N EL + ++G S +++P+ I+++ F N Sbjct: 60 LIPLALPLAILLSSIMTLGNLAENNELTALKSSGLSLFRILRPLTQTVIVIATATFFFAN 119 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P + Q L + + + IKI K +NT +GI I D Sbjct: 120 YVIPVANLKWHTIIYDIQETKVGMLLTPGSYTKEIEGYAIKI-KSGKDNTFKGITIHDYT 178 Query: 180 DTQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + K A SG + L++G +H + + + +S+ + S Sbjct: 179 NPNVLKTVKADSGIVYKGDDGKYLLFHLSNGIIHEELQAQAPVFTEQGQSFHPGGDFRPS 238 Query: 236 STIVLKANDQNLS 248 T KA + Sbjct: 239 RTTQFKAATYKME 251 Score = 37.6 bits (86), Expect = 2.8, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 27/67 (40%), Gaps = 3/67 (4%) Query: 266 ETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYI 325 + Y+ EFH++ ++ V A A++R+ P+ I+ + F FS Sbjct: 382 DLYQIEFHRKFALSGAIIVLF---FVGAPLGAIIRKGGFGAPVVIAALLFMVYFVLFSVG 438 Query: 326 IHKIEQN 332 + N Sbjct: 439 QNLATSN 445 >gi|149907703|ref|ZP_01896450.1| hypothetical protein PE36_07437 [Moritella sp. PE36] gi|149809373|gb|EDM69302.1| hypothetical protein PE36_07437 [Moritella sp. PE36] Length = 355 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 135/356 (37%), Gaps = 14/356 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K ++YI + I + ++ +V ++ VI+ ++++ V T L L +P Sbjct: 2 IKILDIYIGKAILFATMICLFTLVGLSAVIKYVEQLRAVGRGTYGLLEALMYVMLKMPRE 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + L ++ ++EL++I G SR ++ + AI + I + + Sbjct: 62 ITIFFPMAALLGALIGLGALASSSELVVIQAAGQSRFKIVLSTMKTAIPMMIIVMLMGEY 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SR 179 + P QL +A + ++ ++ + ++ +I I K N + L + I + + Sbjct: 122 VAPYTEQKAAQLRGEATSGQSIIRAQKGVWAKDKEN-FINIGKVNNGSELHDVTIYEFAG 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + K A+ + + L D + S ++ + + + Sbjct: 181 NQRLVKTTQARRATY--TGKYWQLTDLRITHFERDSISVTEQATQRWDSTLTPEKLDVVT 238 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + D ++S L + + + +Y F +++ Q L + L+++ Sbjct: 239 IDPEDLSISGLYS-YITYLDSNKQDAGSYELAFWRKIFQPLSIGVMVLLALSFVFGP--- 294 Query: 300 RQRKKIHPIFISLSISFGVFWGF-SYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + + + I GV GF Y+ + + L FL + + + Sbjct: 295 -----LRTVTMGARILMGVVAGFTFYLASETFGPISLVYSLPPFLGAVVPSAIFTL 345 >gi|152998005|ref|YP_001342840.1| permease YjgP/YjgQ family protein [Marinomonas sp. MWYL1] gi|150838929|gb|ABR72905.1| permease YjgP/YjgQ family protein [Marinomonas sp. MWYL1] Length = 353 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 56/353 (15%), Positives = 124/353 (35%), Gaps = 8/353 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + +FL+ + ++ + + + +++I V + ++ LL++ + +P Sbjct: 1 MTKIDKYIASSVLWAFLIVAVVLLGLDFALTFIEQIKKV-NDNYTIQSLLQVILFRLPGK 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + T L ++ +EL ++ G + +L+S+ Sbjct: 60 LAEYIPVASLIGTLMGLGTLAATSELTVMRAAGMPIWRIGFAACQPILLVSLLGMGVSEF 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + L ++ + D+D ++ I + TL GI I Sbjct: 120 VAPVAEQKANLIEKFKGQESGAFSLTGGVWLKADND-FVYIDAADAVGTLYGIQIFSPDG 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 Q I A S + LN+ +P + ++ ++ + + Sbjct: 179 QQLKHIITATSAQ-HTEGSQWQLNNVTETIFAPDHVEKKSLEHANWNVSITPEHLFLASQ 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI--VAADKRAL 298 + + +LS L N + Y EF + + + L+++ V R+ Sbjct: 238 EPDALSLSQLKN-YQTYLKQQKLDGAQYELEFWITALRPIASLALVLVALSSVFGPLRSS 296 Query: 299 VRQRKKIHPIFISLSI--SFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 + + I L+ + +F S I+ IPI+ L I + Sbjct: 297 TMGGRIFTGVIIGLAFQNALNLFGRMSVAINFPPIIGVSIPIIICLLAGIILV 349 >gi|15677421|ref|NP_274577.1| hypothetical protein NMB1571 [Neisseria meningitidis MC58] gi|304387020|ref|ZP_07369275.1| YjgP/YjgQ family permease [Neisseria meningitidis ATCC 13091] gi|7226818|gb|AAF41924.1| conserved hypothetical protein [Neisseria meningitidis MC58] gi|304338892|gb|EFM04991.1| YjgP/YjgQ family permease [Neisseria meningitidis ATCC 13091] gi|308389705|gb|ADO32025.1| hypothetical protein NMBB_1800 [Neisseria meningitidis alpha710] gi|316983819|gb|EFV62799.1| conserved hypothetical protein [Neisseria meningitidis H44/76] gi|325130630|gb|EGC53373.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis OX99.30304] gi|325134626|gb|EGC57266.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M13399] gi|325140779|gb|EGC63293.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis CU385] gi|325199830|gb|ADY95285.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis H44/76] gi|325201753|gb|ADY97207.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M01-240149] gi|325204535|gb|ADY99988.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M01-240355] gi|325205694|gb|ADZ01147.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M04-240196] gi|325208503|gb|ADZ03955.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis NZ-05/33] Length = 356 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 51/367 (13%), Positives = 124/367 (33%), Gaps = 18/367 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +IL + + + +L + +P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGKGSYGIWEMLGYTALKMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + +EL +I +G S L+ + + +I Sbjct: 61 AYELIPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLILSQFGFIFAIATVALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A A + L+ + + + I + + P++TL GI I D Sbjct: 121 VAPTLSQKAENIKAAAINGKISTGNT-GLWLK-EKNSIINVREMLPDHTLLGIKIWARND 178 Query: 181 TQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + A S ++ D L + ++SI +++ + + ++ Sbjct: 179 KNELAEAVEADSAVLNSDGS-WQLKNIRRSTLGEDKVEVSIAAEENWPISVKRNLMDVLL 237 Query: 240 LKANDQNLSFL---LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 +K + ++ L + NN + Y + ++L + L++ Sbjct: 238 VKPDQMSVGELTTYIRHLQNNS----QNTRIYAIAWWRKLVYPAAAWVMALVAFAF--TP 291 Query: 297 ALVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 R +F + + F + P+ L F + ++ + Sbjct: 292 QTTRHGNMGLKLFGGICLGLLFHLAGRLFGFTSQLYGIPPFLAGALPTIAFALLAV--WL 349 Query: 354 IKKKYTK 360 I+K+ + Sbjct: 350 IRKQEKR 356 >gi|197335786|ref|YP_002155171.1| permease YjgP/YjgQ family protein [Vibrio fischeri MJ11] gi|197317276|gb|ACH66723.1| permease YjgP/YjgQ family protein [Vibrio fischeri MJ11] Length = 358 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 52/320 (16%), Positives = 123/320 (38%), Gaps = 8/320 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I + + + +V ++ +I+ ++++ V T L L +P + Sbjct: 3 KILDWYIGRTIIATSALCLVTLVGLSSIIKYVEQLRKVGRGTYDLLDALYFVILSMPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++++ VL AI L + + Sbjct: 63 EMFFPMAALLGALIGLGMLAASSELVVMQAAGYSKLSIGVSVLKTAIPLMLMVMALGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + L + + ++ + DD +I +++ L G+ + D Sbjct: 123 APQAQKMARDLRTFEVSGGNIAAVRAGVWAKDADD-FIYLARVENKEKLYGVTVWQFDDN 181 Query: 182 QT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--STI 238 Q + + +A++ + + +ND + + IS K S T + + Sbjct: 182 QELNNVIFARTATYQAAQDDWEMNDVSITQM-KDKAVISEKKVDSLDWSTTLTPDKLAVV 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADKR 296 +K +Q+L+ L + N Y F ++ Q + + L++ V R Sbjct: 241 TVKPEEQSLTGLYD-YVNYLKDSELDASRYELAFWRKALQPISVAVMMLLALSFVFGPLR 299 Query: 297 ALVRQRKKIHPIFISLSISF 316 ++ + + + + Sbjct: 300 SVTMGARILSGVIAGFTFYI 319 >gi|296125361|ref|YP_003632613.1| permease YjgP/YjgQ family protein [Brachyspira murdochii DSM 12563] gi|296017177|gb|ADG70414.1| permease YjgP/YjgQ family protein [Brachyspira murdochii DSM 12563] Length = 417 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 53/417 (12%), Positives = 127/417 (30%), Gaps = 64/417 (15%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YI+ FL LF F+ + + + I L+ ++ L + L+ Y++P Sbjct: 1 MKKITKYIILETIGPFLAGILFFTFVFVIQLLPELIRLIMNNGAPLLMSLETFVYMLPFN 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P M + ++ + E++++ G + + P++ L +F N+ Sbjct: 61 IAITIPMSILMASIIGYGRLSSDNEIIVMRALGFPHMRIYMPIIILGFFTFMFSLFFNNV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS-KYNPNNTLQGIFIVDSR 179 I + + L + + + F + D + I KY + ++ + I D Sbjct: 121 IMSESNYRYRALISYMVNIRPSIAVGKLEFTEISD-MGFSIGAKYADDKSISNVVIYDKS 179 Query: 180 DTQTHKIYYAQSGSIDLDRQ-----AIILNDGEVHRKSPISKDIS-IMKFKSYTLQT--E 231 DT+ ++ A+ G + + L DG V + F S + Sbjct: 180 DTK--RVITAKYGLWKNNEANSQVVTLTLYDGVVQEMPNYGFVTNDYTVFDSMDINIIRN 237 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLET------------------------ 267 + ++ + +L + + ++ Sbjct: 238 VSTLTSHERGLREMPSWEILKKIKEAKSNANKSVDEQITGMINNSYNNVKNTGIDITSFS 297 Query: 268 --------------------------YRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 Y EF+K ++ + LI + Sbjct: 298 NEYIKTNSAELVSIREKAIEESVPYFYYVEFYKFISIPAACLFMVLIGAPLGIVGKRSGK 357 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 I + I + + + + P I ++ ++ + + + + Sbjct: 358 GFGFGISVIVVVIYYLLITAAELLAGGKKVPP--ILAMWFPNIVLAIMGGFFMVRSF 412 >gi|325132744|gb|EGC55427.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M6190] gi|325138629|gb|EGC61188.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis ES14902] Length = 356 Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats. Identities = 52/366 (14%), Positives = 128/366 (34%), Gaps = 16/366 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +IL + + + +L + +P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGKGSYGIWEMLGYTALKMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + +EL +I +G S L+ + + +I Sbjct: 61 AYELMPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLILSQFGFIFAIATVALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A A + ++ + + + I + + P++TL GI I D Sbjct: 121 VAPTLSQKAENIKAAAINGKISTGNT-GIWLK-EKNSIINVREMLPDHTLLGIKIWARND 178 Query: 181 TQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + A S ++ D L + ++SI +++ + + ++ Sbjct: 179 KNELAEAVEADSAVLNSDGS-WQLKNIRRSTLGEDKVEVSIAAEENWPISVKRNLMDVLL 237 Query: 240 LKANDQNLSFL---LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 +K + ++ L + NN + Y + ++L + L++ Sbjct: 238 VKPDQMSVGELTTYIRHLQNNS----QNTRIYAIAWWRKLVYPAAAWVMALVAFAF--TP 291 Query: 297 ALVRQRKKIHPIF--ISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R +F I L + F + F ++ P ++ L + + + +I Sbjct: 292 QTTRHGNMGLKLFGGICLGLLFHLTGRFFGFTSQLYGIPPFLAG-ALPTIAFALLAVWLI 350 Query: 355 KKKYTK 360 +K+ + Sbjct: 351 RKQEKR 356 >gi|294670274|ref|ZP_06735167.1| permease, YjgP/YjgQ family [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308011|gb|EFE49254.1| permease, YjgP/YjgQ family [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 348 Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats. Identities = 44/311 (14%), Positives = 116/311 (37%), Gaps = 21/311 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+++ + + L + ++ + I+ + V + +++ IP Sbjct: 1 MTLIARYLIKQLSITTLYAMFALLALYSFFDIVAEVGGVGEGGYTGIKMMQYVLLQIPDH 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + N+E+ +I +G S +I +L ++ + + Sbjct: 61 AYQMMPLAVLIGGLIALSQLASNSEMTVIKTSGMSTKNIIAILLGFGLIFAAATALLGES 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQG--IFIVDS 178 + P + L A+ + E L+ + +++ I + + P+ +L+G +F D Sbjct: 121 VAPAANRYAQNLKTTAKNGKISTG-AEGLWIKEQNNI-INVREMLPDQSLRGIKVFRHDQ 178 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILN------DGEVHRKSPISKDISIMKFKSYTLQTES 232 + + + + A+S I D + N DG+ R + Sbjct: 179 -NFKLAESWQAESAVIAADGGWKLANVRRSILDGDRVRTEKHDGEYWQA-------GIRG 230 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + +++ N +L+ L + + + + + Y+ E+ ++L + V+ L+++ Sbjct: 231 SLLDVLLVNPNQMSLTALTAYIKHLEDNKQQ-ADNYKIEWWRKLMYPVATVVMALVALAF 289 Query: 293 ADKRALVRQRK 303 R Sbjct: 290 --TPQSTRHGN 298 >gi|110637606|ref|YP_677813.1| permease [Cytophaga hutchinsonii ATCC 33406] gi|110280287|gb|ABG58473.1| conserved hypothetical protein; possible permease [Cytophaga hutchinsonii ATCC 33406] Length = 359 Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats. Identities = 60/362 (16%), Positives = 133/362 (36%), Gaps = 12/362 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILL-KISGYLIPT 59 MK +LYI++ ++ L + + VI I +++ S+ +L + IP Sbjct: 1 MKKLDLYIIKKFLVTYFFVVLMFMLVITVIDITEKMEDFMKHKLSIWFILVEYYFAFIPY 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +++P + T V ++ TE++ + ++G S ++ P L +IL++ +F Sbjct: 61 MANLLSPITIFIATIFVTANLAARTEIIAMLSSGMSLTRIMYPYLIGSILIAFMVFYMSG 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDS 178 + P K + TF Y N+ + Y+ I YN N + Sbjct: 121 WLIPHGNKKRVDFE-KKYIKSTFFYEGRNVHMKTAPTTYVYIESYNSEINVGYQFTLETI 179 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKS-PISKDISIMKFKSYTLQTESANSST 237 D + A + + + + + + R + +++ + L + Sbjct: 180 IDNRLVSKLKAARMNWNDSTKKWRMEEYFIRRFTEDGKEEVFKGRGLDTALTITPKDFED 239 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L N E + TY +E ++R T +I LI ++A Sbjct: 240 TYMLFETYDMGELNNQIALLEARGSENISTYITEKYQRYTYPFSVIILTLIGVIA----- 294 Query: 298 LVRQRKKIHPIFISLSISFG-VFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMI 354 R+ ++ + I+ V+ F + P+ ++ I L+M Sbjct: 295 SSRKSREGAGLTIAFGFLLAFVYIIFMITSRSLANVGGIGPLFASWIPNIVFIVIGLIMY 354 Query: 355 KK 356 ++ Sbjct: 355 RR 356 >gi|255320990|ref|ZP_05362163.1| permease YjgP/YjgQ family protein [Acinetobacter radioresistens SK82] gi|262379920|ref|ZP_06073075.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] gi|255301954|gb|EET81198.1| permease YjgP/YjgQ family protein [Acinetobacter radioresistens SK82] gi|262298114|gb|EEY86028.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] Length = 356 Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats. Identities = 59/359 (16%), Positives = 134/359 (37%), Gaps = 11/359 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + ++ + + L + + + + + L + + + L + P + Sbjct: 5 RIVAKHVTKTTALAMLGATVVLSILQVLFTYLGELGNL-KEGYNAWQALLYVLWSAPRYI 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ N+EL+I+ G S ++ V+ A+LL I F + Sbjct: 64 YEILPISALIGAVLGLGTLASNSELIIMRAAGISLWRIVGWVMRSALLLVILSFALSEWV 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SRD 180 P + + K+ ++ + + R + +I I N L+ + +VD +D Sbjct: 124 IPVTNERAESV--KSHRSVAQLGEVKGYWSR-EGQRFIYIDYANSQGNLRNVQVVDFDQD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + A SG + D Q + N +V + I + + L + + L Sbjct: 181 YRLQALLNADSGQFEQDGQWRLQNSVQVDILEAGNAVQHIAEQQPLALALKPKYVHMVTL 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 D + S L++ Y ++ +TY+ F ++L + LI+ +R Sbjct: 241 DPEDLSPSQLISFMRYMEEYS-QVPKTYQLAFWQKLASPFALITLVLIACSFIFGP--LR 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKI---EQNPYYIPILYLFLFCISSIFLLMIKK 356 Q+ + I+L I G ++ ++ + +P + + L I +LL + Sbjct: 298 QQSMGFRLVIALFIGLGFYYLQDFLGYASLVYSPSPVWFVFFPILLMFIGGSYLLYRAR 356 >gi|333030546|ref|ZP_08458607.1| permease YjgP/YjgQ family protein [Bacteroides coprosuis DSM 18011] gi|332741143|gb|EGJ71625.1| permease YjgP/YjgQ family protein [Bacteroides coprosuis DSM 18011] Length = 363 Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats. Identities = 55/364 (15%), Positives = 136/364 (37%), Gaps = 16/364 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 + + YI++ +++ + ++ IA V +R++ ++ + I+ +P Sbjct: 5 LTRIDRYIIKKFLGTYIFAITLVISIAVVFDFTERMDRFMNNNAPWDAIIFDYYFNFVPY 64 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + + + + + N+E++ + +TG S L+KP + A ++++F F+ Sbjct: 65 FANLFSALFVFIAVIFFTSKLAENSEIIAMLSTGMSFSRLMKPYMISAAIIALFTFVLGG 124 Query: 120 IIEPK---CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFI 175 + PK R + K + + ++ ++++ L I +Y+ N T + + Sbjct: 125 YVIPKGSVARVEFEDQYYKKRKKSSARNIQ----LQVEEGLIAYIDRYSDYNKTGYRVIL 180 Query: 176 VDSRDTQTHKIYYAQSGSIDLDR-QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + A+S + D L D V + + IS K L + ++ Sbjct: 181 DKFEGKKLSSHLTARSITYDSTAVNMWTLKDYTVRDFDGLHEYISKGDSKDTVLAMDPSD 240 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + L + + + E+HKR+ I +I A+ Sbjct: 241 FLEFQNQEQMMTNPELRAHIDKQKSRGFGNTKVFEIEYHKRIAMSFAAFILTIIG--ASL 298 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI--LYLFLFCISSIFLL 352 ++ +H + + L++SF + F I + P+ +++ + I Sbjct: 299 SSRKAKRGMGLH-LGVGLALSFS-YILFQTISGTFAVSGVVSPMVSMWIPNILYAFIAYY 356 Query: 353 MIKK 356 + +K Sbjct: 357 LYRK 360 >gi|331001132|ref|ZP_08324763.1| permease, YjgP/YjgQ family [Parasutterella excrementihominis YIT 11859] gi|329569437|gb|EGG51215.1| permease, YjgP/YjgQ family [Parasutterella excrementihominis YIT 11859] Length = 384 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 42/270 (15%), Positives = 95/270 (35%), Gaps = 17/270 (6%) Query: 17 LMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNV 76 + + I I +++ +N + +L++ Y LP + + Sbjct: 16 GGAFTVLFSIVVTIGLVRILNQTAGGRYDTGSILEVVAYTSLINLPALISLALFLAVFMT 75 Query: 77 LTSMNRNTELLIIDNT-GTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAK 135 L R++E+ + + G S + I+PVL A+ + + + + P R+ ++ + Sbjct: 76 LNRYWRDSEMFVWFSAGGLSLTSWIRPVLRFALPVVLVVAACSIAVSPWSRAQVQAYRDR 135 Query: 136 AQLALTFSYLEENLFFRLDDDLYIKISK--YNPNNTLQGIFIVDSRDTQTHKIYYAQSGS 193 S L F + + ++ + +V+ + + + + G Sbjct: 136 FAQKEDISKLSSGRFIEAKSGRQVFFLEGVDQEKGKVKTLLMVELKKDGSRSVLVSDRGH 195 Query: 194 IDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS-TIVLKANDQNLSF 249 I+ I+L+DG + P S+ F+ Y ++ +S+ S K N + Sbjct: 196 IENKPNGDRYIVLDDGRKYDTKPSGLGASVSDFREYEIRMDSSPSEVGANKKLNAMPIED 255 Query: 250 LLNPNPNNPNYRPELLETYRSEFHKRLTQW 279 L+ N SE R++ Sbjct: 256 LIKRTDN----------RAASELFWRISWP 275 >gi|325110017|ref|YP_004271085.1| permease YjgP/YjgQ family protein [Planctomyces brasiliensis DSM 5305] gi|324970285|gb|ADY61063.1| permease YjgP/YjgQ family protein [Planctomyces brasiliensis DSM 5305] Length = 392 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 54/395 (13%), Positives = 135/395 (34%), Gaps = 46/395 (11%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI F + + + I+ ++ + S + +++I Y++ ++ Sbjct: 1 MKLLQRYI---TMELFRVFAMVLTGISVLLVFVGVFQQASENGLGAMEVIQILPYVLYSL 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP+ P + T V M + EL G + ++LI P L + +LS+ + + Sbjct: 58 LPITIPATMLLTVTVVYGRMAGDQELTAARAAGINLLSLIWPSLLMGAMLSVLALLLTDQ 117 Query: 121 IEPKCRSTIKQ-LSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P I++ + K + ++ F + L I + + TL I + Sbjct: 118 VIPWSIQKIQETVLVKMEKIFLDQLRADHQFVESNQGLAITVIDV-QDKTLIKPTIRYTP 176 Query: 180 DTQTHKIYYAQSGSIDLD-----------RQAIILNDGE--------------VHRKSPI 214 D A+S I + I ++DG + K P Sbjct: 177 DNGQIFTIQAESARIRFNIQERTAWIKIVGGYINMDDGHGAWIREEEYPFPLPMVDKQPK 236 Query: 215 SKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNP-----------NPNNPNYRPE 263 ++ +++ + + + + ++ L + + Sbjct: 237 ARHMAVKEISEELEEITATRRQQESHRVLARSSHLLTGHFEQLAMSSFVELVQQQHVDNQ 296 Query: 264 LLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFS 323 ++ +E+H R F L+ + +A +R+ + F+ +++ Sbjct: 297 RVDRLSTEYHSRFALAGSCFFFVLVGSPFSIMQA---KRQFLTSFFMVFMPIVFLYYPVV 353 Query: 324 YIIHKIEQNPYYIP--ILYLFLFCISSIFLLMIKK 356 + +N P ++++ I + ++++ Sbjct: 354 MLAMNQSKNGMVPPESVMWIANVATGVIGIYLLRR 388 >gi|59711022|ref|YP_203798.1| inner membrane protein [Vibrio fischeri ES114] gi|59479123|gb|AAW84910.1| conserved inner membrane protein [Vibrio fischeri ES114] Length = 358 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 51/320 (15%), Positives = 122/320 (38%), Gaps = 8/320 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I + + + +V ++ +I+ ++++ V T L L +P + Sbjct: 3 KILDWYIGRTIIATSALCLVTLVGLSSIIKYVEQLRKVGRGTYDLLDALYFVILSMPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++++ VL AI L + + Sbjct: 63 EMFFPMAALLGALIGLGMLAASSELVVMQAAGYSKLSIGVSVLKTAIPLMLMVMALGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + L + + ++ + DD +I +++ L G+ + D Sbjct: 123 APQAQKMARDLRTFEVSGGNIAAVRAGVWAKDADD-FIYLARVENKEKLYGVTVWQFDDN 181 Query: 182 -QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--STI 238 + + +A++ + + +ND + + IS K S T + + Sbjct: 182 QDLNNVIFARTATYQAAQDDWKMNDVSITQM-KDKAVISEKKVDSLDWSTTLTPDKLAVV 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADKR 296 +K +Q+L+ L + N Y F ++ Q + + L++ V R Sbjct: 241 TVKPEEQSLTGLYD-YVNYLKDSELDASRYELAFWRKALQPISVAVMMLLALSFVFGPLR 299 Query: 297 ALVRQRKKIHPIFISLSISF 316 ++ + + + + Sbjct: 300 SVTMGARILSGVIAGFTFYI 319 >gi|241760405|ref|ZP_04758500.1| permease YjgP/YjgQ [Neisseria flavescens SK114] gi|241319283|gb|EER55761.1| permease YjgP/YjgQ [Neisseria flavescens SK114] Length = 356 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 48/362 (13%), Positives = 128/362 (35%), Gaps = 10/362 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +I+ + + + + L + +P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEIINEVGDLGKGSYNSAKLGQYVLMQMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + +EL +I +G S L+ + ++ +I Sbjct: 61 AYELMPLAVLIGGLISLSQLASGSELTVIKASGMSTKKLLLILSQFGLIFAIATVALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A A + L+ + + + I + + P++TL GI I D Sbjct: 121 VAPTLSQKAENIKAAAINGKISTGNT-GLWLK-EKNSIINVREMLPDHTLLGIKIWQRND 178 Query: 181 TQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + A+S ++ D L + ++S +++ + + ++ Sbjct: 179 KNELTQAAEAESAVLNPDGS-WQLKNIRRSILGEDKVEVSTAAEENWPISVKRNLMDVLL 237 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 +K + ++ L ++ + + Y + ++L + + L++ Sbjct: 238 VKPDQMSVGELTT-YIDHLEKNNQNTQVYAIAWWRKLVYPVAAWVMALVAFAF--TPQTT 294 Query: 300 RQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R +F + + + F + P+ L LF + +++L+ ++ Sbjct: 295 RHGNMGLKLFGGICLGLLFHFAGRLFGFTSQLYGVPPFLAGALPTVLFALLAVYLIRRQE 354 Query: 357 KY 358 K Sbjct: 355 KR 356 >gi|294785396|ref|ZP_06750684.1| permease, YjgP/YjgQ family [Fusobacterium sp. 3_1_27] gi|294487110|gb|EFG34472.1| permease, YjgP/YjgQ family [Fusobacterium sp. 3_1_27] Length = 363 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 55/366 (15%), Positives = 128/366 (34%), Gaps = 17/366 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K ++YI + + FLM+ + + + + Q + I ++ + + L+P + Sbjct: 2 IKKMDIYISKYFIKFFLMNIIGFMGVFLLAQTFKIIKYINQGKLAGGEIFDYIINLLPKM 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 P + ++ M N E++ + +G + +++ L +A ++S+ +F N Sbjct: 62 FVETAPLSVLLAGLITISIMASNLEIVSLKTSGIRFLRIVRAPLIIAFVISLIVFFINNS 121 Query: 121 IEPKCRSTIK-QLSAKAQLALTFSYLEENL-FFRLDDDLYIKISKYN-PNNTLQGIFI-- 175 I K + I + +L +EN F D + K N + I + Sbjct: 122 IYTKSLAKINFYRRGEVDESLKLPTTKENAFFINNTDGYLYLMGKINRETGVAENIEVVK 181 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 +++ ++ +I A+S D D I ++ ++ + Y + Sbjct: 182 FETQISKPKEIITAKSAKFDTDEDKWIFSNVNIYNVDTK----ETVTKTEYKSDLYKDDP 237 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYR---PELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 S + + + + + E Y +E KR + I I + A Sbjct: 238 SNFIRASAEDPRMLTIKELKKTIKEQKNIGEDTRIYLAELAKRYSFPFASFIVAFIGLSA 297 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIF 350 VR + + I + +G + S + N P + ++ I Sbjct: 298 --SSKYVRGGRTTMNLVICVVAGYGYYLV-SGAFEAMSLNGIVNPFVASWIPNILYLIIG 354 Query: 351 LLMIKK 356 + + + Sbjct: 355 IYFMNR 360 >gi|255066290|ref|ZP_05318145.1| permease, YjgP/YjgQ family [Neisseria sicca ATCC 29256] gi|255049500|gb|EET44964.1| permease, YjgP/YjgQ family [Neisseria sicca ATCC 29256] Length = 356 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 45/364 (12%), Positives = 128/364 (35%), Gaps = 14/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +I+ + + + + + + +P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEIINEVGDLGKGSYNGATMAQYVLMQMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + +EL +I +G S L+ + ++ +I Sbjct: 61 AYELMPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLILSQFGLIFAIATAALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + + + A + L+ + + + I + + P++TL GI I D Sbjct: 121 IAPVLSQKAENIKSAAINGKISTGNT-GLWLK-EKNSIINVREMLPDHTLLGIKIWVRND 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + ++ + + L + S ++S +++ + + +++ Sbjct: 179 KNELRQATEAESAVLNNDGSWQLKNIRRSTLSEDKVEVSTAAEENWPIAVKRNLMDVLLV 238 Query: 241 KANDQNLSFL---LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 K + ++ L ++ NN + + Y + ++L + + L++ Sbjct: 239 KPDQMSVGELTTYISHLENN----NQNTQIYAIAWWRKLVYPVAAWVMALVAFAF--TPQ 292 Query: 298 LVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R +F + + + F + P+ L F + +++L+ Sbjct: 293 TTRHGNMGLKLFGGICLGLLFHFAGRLFGFTSQLYGVPPFLAGALPTIAFALLAVWLIRR 352 Query: 355 KKKY 358 +++ Sbjct: 353 QERR 356 >gi|325198681|gb|ADY94137.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis G2136] Length = 356 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 53/372 (14%), Positives = 124/372 (33%), Gaps = 28/372 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +IL + + + +L + +P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGKGSYGIWEMLGYTALKMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + +EL +I +G S L+ + + +I Sbjct: 61 AYELMPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLILSQFGFIFAIATVALGEW 120 Query: 121 IEPKCRSTIKQLSA-----KAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI 175 + P + + A K T +L+E + I + + P++TL GI I Sbjct: 121 VAPTLSQKAENIKAAAINGKISTGNTDIWLKEK-------NSIINVREMLPDHTLLGIKI 173 Query: 176 VDSRDTQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 D + A S ++ D L + ++SI +++ + + Sbjct: 174 WARNDKNELAEAVEADSAVLNSDGS-WQLKNIRRSTLGEDKVEVSIAAEENWPISVKRNL 232 Query: 235 SSTIVLKANDQNLSFL---LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 +++K + ++ L + NN + Y + ++L + L++ Sbjct: 233 MDVLLVKPDQMSVGELTTYIRHLQNNS----QNTRIYAIAWWRKLVYPAAAWVMALVAFA 288 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISS 348 R +F + + F + P+ L F + + Sbjct: 289 F--TPQTTRHGNMGLKLFGGICLGLLFHLAGRFFGFTSQLYGIPPFLAGALPTIAFALLA 346 Query: 349 IFLLMIKKKYTK 360 + +I+K+ + Sbjct: 347 V--WLIRKQEKR 356 >gi|226329629|ref|ZP_03805147.1| hypothetical protein PROPEN_03539 [Proteus penneri ATCC 35198] gi|225202815|gb|EEG85169.1| hypothetical protein PROPEN_03539 [Proteus penneri ATCC 35198] Length = 343 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 52/337 (15%), Positives = 122/337 (36%), Gaps = 24/337 (7%) Query: 24 VFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRN 83 + I + ++++ + N+++ + IP + ++ P + + + Sbjct: 1 MLIFFSQKLVEILGAAVEGNIPTNLVVSLLWLGIPEMAQLILPLSLFLGLLMTYSKLYVE 60 Query: 84 TELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFS 143 +E+ +++ G + L++ L L++L S + + P +Q+ A+ + + Sbjct: 61 SEITVMNACGIGKKALVQAALLLSLLTSALAAGNVIWLIPWSSVHQEQVLEDAKANPSLA 120 Query: 144 YLEENLF-FRLDDDLYIKISKYNPNNTLQGIFIVDSR--DTQTHKIYYAQSGS---IDLD 197 L E F D ++ + + N Q +F+ R Q + A G + Sbjct: 121 ALMEGQFKMSSDRNMVLYLGSV-KGNQFQDVFLAQLRPTQDQRPSVVVADKGYTKELPNG 179 Query: 198 RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNN 257 Q ++L++G + + + +D I F Y S+ + + +S L + N Sbjct: 180 NQIVVLSEGTRYEGTAVLRDFRITDFNDYQAVIGHRESTINRNRVEQKTMSELWHSNETE 239 Query: 258 PNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFG 317 +EFH RLT VI ++ + RQ + +S+ + Sbjct: 240 S----------IAEFHWRLTLIFSVVIMAVMVVP--LSEVNPRQGR-----VLSMLPAML 282 Query: 318 VFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 ++ F + + N + L + L + Sbjct: 283 LYLVFFLLQSSLHSNGEKGKVDPLIAMWSVNGVYLAL 319 >gi|256845304|ref|ZP_05550762.1| conserved hypothetical protein [Fusobacterium sp. 3_1_36A2] gi|256718863|gb|EEU32418.1| conserved hypothetical protein [Fusobacterium sp. 3_1_36A2] Length = 363 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 54/366 (14%), Positives = 127/366 (34%), Gaps = 17/366 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K ++YI + + FLM+ + + + + Q + I ++ + + L+P + Sbjct: 2 IKKMDMYISKYFIKFFLMNIIGFMGVFLLAQTFKIIKYINQGKLAGEEIFDYILNLLPKM 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 P + ++ M N E++ + +G + +++ L +A ++S+ +F N Sbjct: 62 FVETAPLSVLLAGLITVSIMASNLEIVSLKTSGIRFLRIVRAPLIIAFVISLIVFFINNS 121 Query: 121 IEPKCRSTIK-QLSAKAQLALTFSYLEENL-FFRLDDDLYIKISKYNPNNTLQ---GIFI 175 I K + I + +L +EN F D + K N + + Sbjct: 122 IYTKSLAKINFYRRGEVDESLKLPTTKENAFFINNTDGYLYLMGKINRETGMAENIEVIK 181 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 ++ ++ +I A+S D+D I ++ ++ + Y + Sbjct: 182 FETEISKPKEIITAKSAKFDIDENKWIFSNVNIYNVDTK----ETVTKTEYKSDLYKDDP 237 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYR---PELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 S + + + + + E Y +E KR + I I + A Sbjct: 238 SNFIRASAEDPRMLTIKELKKTIKEQKNIGEDTRIYLAELAKRYSFPFASFIVAFIGLSA 297 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIF 350 VR + + I + +G + S + N P + ++ I Sbjct: 298 --SSKYVRGGRTTMNLVICVVAGYGYYLV-SGAFEAMSLNGIVNPFVASWIPNILYLIIG 354 Query: 351 LLMIKK 356 + + + Sbjct: 355 IYFMNR 360 >gi|229495721|ref|ZP_04389449.1| permease, YjgP/YjgQ family [Porphyromonas endodontalis ATCC 35406] gi|229317295|gb|EEN83200.1| permease, YjgP/YjgQ family [Porphyromonas endodontalis ATCC 35406] Length = 658 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 80/205 (39%), Gaps = 2/205 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K YI++ +M+ + F+ + + R + + +L+++ + L Sbjct: 7 KRMYTYIIQQFMPLLVMTFVICWFVVLMQMLWSRADEIVGRGLDTWVLIQLLFHAAVMAL 66 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P TP + + + ELL + + G ++ P+ + I + + LF+ N Sbjct: 67 PTATPLGILLASVMTFGGLGERLELLAMKSAGVPLYRIMSPLFVVGITIGLALFVYLNTA 126 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVD-SR 179 + Q+ AQ + + + +F+ + + K + N TL + I D SR Sbjct: 127 MMDAQVKFFQIIFSAQQSRPDLEIPQGVFYNQIPGYSLFVKKKDHENRTLHELMIYDFSR 186 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILN 204 + +I A SG + +D L Sbjct: 187 GSSQPRIVLADSGKLQMDASKTFLT 211 Score = 39.2 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 14/100 (14%), Positives = 37/100 (37%), Gaps = 6/100 (6%) Query: 257 NPNYRPE--LLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSI 314 + Y+ E ++ E H++ T + ++F I + AL+R+ P+ S+ + Sbjct: 382 DGAYQAEAYNFRSHSQERHRKFTFPVACIVFFFIGV---PLGALIRKGGIGMPMVASILL 438 Query: 315 SFGVFWGFSYIIHKIEQNPYY-IPILYLFLFCISSIFLLM 353 + + + + ++ F + I + Sbjct: 439 FVVYYMIDTLGFNLSYNGTWPTWLGMWFSTFILLPIGAFL 478 >gi|262274978|ref|ZP_06052789.1| putative membrane protein [Grimontia hollisae CIP 101886] gi|262221541|gb|EEY72855.1| putative membrane protein [Grimontia hollisae CIP 101886] Length = 357 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 58/357 (16%), Positives = 141/357 (39%), Gaps = 5/357 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +LYI R I + + +V ++ +I+ ++++ V + ++ ++ +P + Sbjct: 3 KILDLYIGRTIIATTSLCLATLVGLSAIIKFVEQLRSVGEGSFTMMTAVQYVLLSMPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L ++ ++EL+++ G S++ + VL A+ L + + Sbjct: 63 EMFFPMAVLLGALIGLGTLASSSELVVMQAAGFSKLDIGLSVLKTAMPLMLVVLALGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + ++L A A+ + ++ + D +I I++ + +L G+ I DT Sbjct: 123 APDAQKAARELRAFAKSGGNVMSVRRGVWAKDGSD-FIYIARTDQQESLVGVNIWKFDDT 181 Query: 182 QTHKI-YYAQSGSIDLDRQAIILNDGEV-HRKSPISKDISIMKFKSYTLQTESANSSTIV 239 QT K +A+ LD+ + +L + V H P+ + + K ++ S + Sbjct: 182 QTLKAQVFAEQARY-LDKDSWMLENVTVTHFDGPVKINETTEKQLAWKTTLTPEKLSIVT 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 +K + +LS + + + + Y +++ Q L + L+++ Sbjct: 241 VKPEELSLSGVYS-YVDYLKASEQDASRYELALWRKVLQPLSIGVMMLLALSFVFGPLRS 299 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + +F + + + P ++ + L I L+ +K Sbjct: 300 VTMGARVLSGVIFGFAFYISNEVFGPMTLVYNLPPFVGAIAPSLAFIGVTLYLLNRK 356 >gi|56708376|ref|YP_170272.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110670846|ref|YP_667403.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis FSC198] gi|134302361|ref|YP_001122330.1| YjgP/YjgQ permease [Francisella tularensis subsp. tularensis WY96-3418] gi|224457506|ref|ZP_03665979.1| YjgP/YjgQ permease [Francisella tularensis subsp. tularensis MA00-2987] gi|254370999|ref|ZP_04987002.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis FSC033] gi|254875199|ref|ZP_05247909.1| permease yjgP/yjgQ family protein [Francisella tularensis subsp. tularensis MA00-2987] gi|56604868|emb|CAG45952.1| Permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110321179|emb|CAL09335.1| Permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis FSC198] gi|134050138|gb|ABO47209.1| putative permease YjgP/YjgQ family [Francisella tularensis subsp. tularensis WY96-3418] gi|151569240|gb|EDN34894.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis FSC033] gi|254841198|gb|EET19634.1| permease yjgP/yjgQ family protein [Francisella tularensis subsp. tularensis MA00-2987] gi|282159995|gb|ADA79386.1| putative permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis NE061598] Length = 360 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 63/357 (17%), Positives = 127/357 (35%), Gaps = 10/357 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 E Y + I +F LFI+ I +++ S ++ ++K IP + Sbjct: 2 ILEKYYNKDIVNTFTSITLFIISIVSANLLIRLFQEAYSQGLGIDSIVKFVILTIPENVS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + N E+ + G + + ++K L + L+I I+ + Sbjct: 62 LVAPIAIFLAIVICFGKYFANNEMFVTIAGGITWMQIVKNTLKPVVALTIITLITVMYLN 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR-DT 181 P + T+ A S + + + D I I + NTL +F+ + Sbjct: 122 PLSKQTLDIYRASLSAKALLSSITDQKIIKAPDGKIIYIGNKS-GNTLSDVFLYQNTPQD 180 Query: 182 QTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +K+ A + I D+ A I + ++ K+ + + S K + Sbjct: 181 GEYKVMTAPTAKIVSDKTAAYIDFMNVNIYTKNSQNSEYSYDNAKKAIYTIFDNSDRDYN 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 D+ L N N+ N Y++EF R+ + ++ L+++ R Sbjct: 241 HDRVDRLYMHTLIENFNDKN----NGTAYKAEFLGRINNAISVIVSSLLALALCRLRPRQ 296 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + K+ P + L+I F + P +I +L + + I+K Sbjct: 297 NKYAKLLPSVVVLAIYLCTNM-FINTLMANSSVPVWIGF-WLPHIFFTIFAVRTIRK 351 >gi|225010828|ref|ZP_03701296.1| permease YjgP/YjgQ family protein [Flavobacteria bacterium MS024-3C] gi|225005036|gb|EEG42990.1| permease YjgP/YjgQ family protein [Flavobacteria bacterium MS024-3C] Length = 462 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 39/235 (16%), Positives = 83/235 (35%), Gaps = 15/235 (6%) Query: 24 VFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRN 83 +FI I I+ ++ L I+ K YL+P + V P + + + + Sbjct: 1 MFIFIFQSIWLYIDNLAGKGLDLVIIGKFIFYLLPNLTEKVLPLTVLLSSILTFGTFAEH 60 Query: 84 TELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFS 143 E + +G S ++ ++ L +L + F + I P L Sbjct: 61 YEFAAMKASGISLQRSMRTLIVLVSVLGLVTFYFADRIIPAAELKSYSLKKNIAKVKPAV 120 Query: 144 YLEENLFFRLDD-DLYIKISKYNPNNT--LQGIFIVDSRDTQTHKIYY-AQSGSIDLDRQ 199 + E LF + + I + + N L+ + I D Q + A+ G + Sbjct: 121 AIAEGLFSEFEGTGMTILVQEKYGENDRYLRDVTIHKKTDNQINTTVIKAKEGELLSSEN 180 Query: 200 A----IILNDGEVHR-------KSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 + ++L DG + K+ ++ F++YT+ + + + + Sbjct: 181 SNLIKLVLKDGHYYESLSVTTSKNHQKHPYAVSNFETYTINIDLTELNMVDMDEQ 235 >gi|260434859|ref|ZP_05788829.1| unclassified ABC-type transport system permease [Synechococcus sp. WH 8109] gi|260412733|gb|EEX06029.1| unclassified ABC-type transport system permease [Synechococcus sp. WH 8109] Length = 387 Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats. Identities = 43/328 (13%), Positives = 111/328 (33%), Gaps = 18/328 (5%) Query: 32 ILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDN 91 + + + + + I ++ IP L P M + V T ++ N EL + + Sbjct: 46 MFELVRQMVDKNLPITIAAQVLFLSIPRWLAFSVPIGTLMASLFVFTRLSANNELTALRS 105 Query: 92 TGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFF 151 G + +I + L++ +++F F +++ P+ + + + E++ + Sbjct: 106 LGITTKRMISAAIALSMAMTLFSFFLNDVVVPRSERYAEVNLKRGLGQAIANKTGEDIIY 165 Query: 152 RLDDDLY-------------IKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDR 198 + S + ++ + ++D + ++ A + D+ Sbjct: 166 PRFGRRTGIDGKSADRGLLQLFYSWKFQDGEMKDVTVLDFSRSGITQLLRADRAIWNDDQ 225 Query: 199 QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLS---FLLNPNP 255 DG + + + + FK Y +SA ++ + N++ L Sbjct: 226 TGWDFLDGHILTLT-ANGSSTKADFKRYLYPLDSAPQRLAGIEEDAVNMTVAEALQAQRL 284 Query: 256 NNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSIS 315 + + R ++ T + ++FGL + R + + I+ Sbjct: 285 YEESGSIKEARKIRVRIQEKFTVPMACLVFGLFG-ATLGAQPTYRTSRSFSFVLTLGIIA 343 Query: 316 FGVFWGFSYIIHKIEQNPYYIPILYLFL 343 GFS+ ++ I +L + Sbjct: 344 IYYVIGFSFSSLGVKGTLSPILAAWLPV 371 >gi|169634641|ref|YP_001708377.1| hypothetical protein ABSDF3306 [Acinetobacter baumannii SDF] gi|169153433|emb|CAP02575.1| conserved hypothetical protein; putative membrane protein [Acinetobacter baumannii] Length = 356 Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats. Identities = 52/363 (14%), Positives = 133/363 (36%), Gaps = 19/363 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y+ + + + + + + + L + + + + + P L Sbjct: 5 RIVAKYVTKTTALAMFGTTIVLSVLQILFTYLGELGELKPDYNAWQAFI-YVLWGAPRYL 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ N+EL+++ + G S ++ V+ A+LL + F + Sbjct: 64 YEILPISALIGAVIGLGALASNSELIVMRSVGISLWRIVGWVMRSALLLIVLSFALSEWV 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SRD 180 P + + K+ ++ + + R + +I I N L+ I +VD ++D Sbjct: 124 VPYTNEKAQSV--KSHRSVAALGEVKGYWSR-EGQRFIYIDYANSQGNLRDIQVVDFNKD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + A+ G D Q + ++ + + ++ +S L + + L Sbjct: 181 YHLQSLINAEQGKFIQDGQWTLQKASQMDILTDGNSILNNHDQQSLGLALQPKYVHMVTL 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 D + S L++ Y ++ +TY+ F +++ + L++ Sbjct: 241 DPEDLSPSQLISFMRYMDEYS-QVPKTYQLAFWQKVASPFSLITLVLVACSFIFGPL--- 296 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKI-------EQNPYYIPILYLFLFCISSIFLLM 353 + H + L I+ + GF Y+ + +P + ++ + L + +LL Sbjct: 297 ---RQHSMGFRLVIALFIGLGFYYLQDFLGYASLVYAPSPAWFVLMPIILMFGAGSYLLY 353 Query: 354 IKK 356 + Sbjct: 354 RAR 356 >gi|254303141|ref|ZP_04970499.1| hypothetical protein FNP_0781 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323333|gb|EDK88583.1| hypothetical protein FNP_0781 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 363 Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats. Identities = 59/364 (16%), Positives = 130/364 (35%), Gaps = 13/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K ++YI + + FLM+ + + + + Q + I ++ + + L+P + Sbjct: 2 IKKMDMYISKYFIKFFLMNIIGFMGVFLLAQTFKIIKYINQGKLAGGEIFDYILNLLPKM 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 P + ++ M N E++ + +G + +++ L +A ++S+F+F N Sbjct: 62 FVETAPLSVLLAGLITVSIMASNLEIVSLKTSGIRFLRIVRAPLIIAFVISLFVFFINNS 121 Query: 121 IEPKCRSTIK-QLSAKAQLALTFSYLEENL-FFRLDDDLYIKISKYN-PNNTLQGIFIVD 177 I K + I + L +EN F D + K N + I IV Sbjct: 122 IYTKSLAKINFYRRGEVDETLKLPTTKENAFFINNTDGYLYLMGKINRETGVAENIEIVK 181 Query: 178 SRDT--QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN- 234 + + +I A+S D + I ++ ++ + ++ ++KS + + +N Sbjct: 182 FENEISKPKEIITAKSAKFDTEENKWIFSNANIYNVD-TKETVTKTEYKSNLYKDDPSNF 240 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + L N E Y +E KR + I I + Sbjct: 241 IRASAEDPRMLTIKELKKTIKEQKNI-GEDTRIYLAELAKRYSFPFASFIVAFIGLSV-- 297 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLL 352 VR + + I + +G + S + N P + ++ I + Sbjct: 298 SSKYVRGGRTTMNLVICVVAGYGYYLV-SGAFEAMSLNGILNPFIASWIPNILYLIIGIY 356 Query: 353 MIKK 356 + + Sbjct: 357 FMNR 360 >gi|285019432|ref|YP_003377143.1| permease [Xanthomonas albilineans GPE PC73] gi|283474650|emb|CBA17149.1| putative yjgp/yjgq family permease protein [Xanthomonas albilineans] Length = 361 Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats. Identities = 46/257 (17%), Positives = 104/257 (40%), Gaps = 7/257 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+LR +SF + + ++ ++ ++ + ++ +L G Sbjct: 1 MPKLDRYLLRDFFQSFSATLIVLLVVSVGGVLVDVLGNIADGRIPAKLLFSQLGLQFVVY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP++ P + L + R++E+ +I G L++P+L L + + + + Sbjct: 61 LPLILPLALMLGLLLALARLYRDSEMAVITAIGVGPRRLLRPILMLVVPVVTLVGLCSLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSR 179 + P T QL +A +L + LE F L D + +S + + T L +F+ + Sbjct: 121 LGPWADRTSDQLVNEANHSLLMAGLEAGRFTSLPDGSIVYVSTLSGDGTRLSKVFVQRQK 180 Query: 180 DTQTHKIYYAQSGSIDLDRQA---IILNDGEVHRK--SPISKDISIMKFKSYTLQTESAN 234 D + + Q G++ + +A + L DG + D +M+F + + + Sbjct: 181 DGRLD-VVTGQRGAMFFEGKAERYLRLEDGYRFEGPLAGDGLDYRMMRFANNDVALSERS 239 Query: 235 SSTIVLKANDQNLSFLL 251 ++ + L+ Sbjct: 240 AARKDDDPALLTTAALI 256 >gi|319637673|ref|ZP_07992439.1| hypothetical protein HMPREF0604_00062 [Neisseria mucosa C102] gi|317400828|gb|EFV81483.1| hypothetical protein HMPREF0604_00062 [Neisseria mucosa C102] Length = 356 Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats. Identities = 48/362 (13%), Positives = 128/362 (35%), Gaps = 10/362 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +I+ + + + + L + +P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEIINEVGDLGKGSYNGAKLGQYVLMQMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + +EL +I +G S L+ + ++ +I Sbjct: 61 AYELMPLAVLIGGLISLSQLASGSELTVIKASGMSTKKLLLILSQFGLIFAIATVALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A A + L+ + + + I + + P++TL GI I D Sbjct: 121 VAPTLSQKAENIKAAAINGKISTGNT-GLWLK-EKNSIINVREMLPDHTLLGIKIWQRND 178 Query: 181 TQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + A+S ++ D L + ++S +++ + + ++ Sbjct: 179 KNELTQAAEAESAVLNPDGS-WQLKNIRRSILGEDKVEVSTAAEENWPISVKRNLMDVLL 237 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 +K + ++ L ++ + + Y + ++L + + L++ Sbjct: 238 VKPDQMSVGELTT-YIDHLEKNNQNTQVYAIAWWRKLVYPVAAWVMALVAFAF--TPQTT 294 Query: 300 RQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R +F + + + F + P+ L LF + +++L+ ++ Sbjct: 295 RHGNMGLKLFGGICLGLLFHFAGRLFGFTSQLYGVPPFLAGALPTVLFALLAVYLIRRQE 354 Query: 357 KY 358 K Sbjct: 355 KR 356 >gi|89256769|ref|YP_514131.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica LVS] gi|115315160|ref|YP_763883.1| hypothetical protein FTH_1434 [Francisella tularensis subsp. holarctica OSU18] gi|167010910|ref|ZP_02275841.1| hypothetical protein Ftulh_09393 [Francisella tularensis subsp. holarctica FSC200] gi|254368060|ref|ZP_04984080.1| hypothetical protein FTHG_01381 [Francisella tularensis subsp. holarctica 257] gi|254369660|ref|ZP_04985670.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica FSC022] gi|89144600|emb|CAJ79919.1| Permease YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica LVS] gi|115130059|gb|ABI83246.1| conserved hypothetical protein [Francisella tularensis subsp. holarctica OSU18] gi|134253870|gb|EBA52964.1| hypothetical protein FTHG_01381 [Francisella tularensis subsp. holarctica 257] gi|157122619|gb|EDO66748.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica FSC022] Length = 360 Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats. Identities = 63/357 (17%), Positives = 127/357 (35%), Gaps = 10/357 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 E Y + I +F LFI+ I +++ S ++ ++K IP + Sbjct: 2 ILEKYYNKDIVNTFTSITLFIISIVSANLLIRLFQEAYSQGLGIDSIVKFVILTIPENVS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + N E+ + G + + ++K L + L+I I+ + Sbjct: 62 LVAPIAIFLAIIICFGKYFANNEMFVTIAGGITWMQIVKNTLKPVVALTIITLITVMYLN 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR-DT 181 P + T+ A S + + + D I I + NTL +F+ + Sbjct: 122 PLSKQTLDIYRASLSAKALLSSITDQKIIKAPDGKIIYIGNKS-GNTLSDVFLYQNTPQD 180 Query: 182 QTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +K+ A + I D+ A I + ++ K+ + + S K + Sbjct: 181 GEYKVMTAPTAKIVSDKTAAYIDFMNVNIYTKNSQNSEYSYDNAKKAIYTIFDNSDRDYN 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 D+ L N N+ N Y++EF R+ + ++ L+++ R Sbjct: 241 HNRVDRLYMHTLIENFNDKN----NGTAYKAEFLGRINNAISVIVSSLLALALCRLRPRQ 296 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + K+ P + L+I F + P +I +L + + I+K Sbjct: 297 NKYAKLLPSVVVLAIYLCTNM-FINTLMANSSVPVWIGF-WLPHIFFTIFAVRTIRK 351 >gi|114326913|ref|YP_744070.1| permease [Granulibacter bethesdensis CGDNIH1] gi|114315087|gb|ABI61147.1| permease [Granulibacter bethesdensis CGDNIH1] Length = 404 Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats. Identities = 46/351 (13%), Positives = 115/351 (32%), Gaps = 25/351 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y++R I R F+ + + ++ + ++++ + L Sbjct: 40 IIQTYLIREIMRPFVPVLAVLAGLFGSFSAAGFLSDAVNGLLPTGSIIQMVSLKVLIALE 99 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + +N + E+ + + + VL L + +++ + Sbjct: 100 VLIPISLYLSVLLAFGRLNSDQEITAMAALRVQPERIWRIVLSLCLAMAVVVGALSLFAR 159 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD--LYIKISKYNPNNTLQGIFIVDSRD 180 P + + LS +A ++L +E F+ + + P G+F+ Sbjct: 160 PWAYARLHALSDQAHVSLNTDAMEAGTFYIGPKGNRVIFFTHRQGPEEPASGVFVQ-LWS 218 Query: 181 TQTHKIYYAQSGSID-----LDRQAIILNDGEVHRKSPIS-KDISIMKFKSYTLQTESAN 234 +I A+ + I+L+D ++R + + ++ L + Sbjct: 219 PDRMEIISARQAMTLRPASPDAKSQILLSDAHIYRFNRSGEGNDEVLDAAETVLDIQPNK 278 Query: 235 SSTIVLKANDQNLSFLL-NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + A LL +P+P + +E R + + ++ GL+ I + Sbjct: 279 ADAAAYSAVATASRLLLGSPSPAD-----------IAELQWRFSTPVSTLLLGLLGIPMS 327 Query: 294 -DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 K R + I S +++ H + IP ++ Sbjct: 328 RSKPRQSRYARFGAAILAYFSYYLLCTSARTWVQHGV---VPAIPGIWWVP 375 >gi|167856192|ref|ZP_02478929.1| hypothetical protein HPS_08251 [Haemophilus parasuis 29755] gi|167852681|gb|EDS23958.1| hypothetical protein HPS_08251 [Haemophilus parasuis 29755] Length = 355 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 57/360 (15%), Positives = 124/360 (34%), Gaps = 9/360 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E YI R I S +++ +V + +I+ ++ V + + +P Sbjct: 1 MNVLERYIGRTILASIMLTLFMLVGLGAIIKFVEEFRSVGRGSYDGLHAAYYTLLTMPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + L + +EL+++ + G SR + V+ AI L + I Sbjct: 61 IETFFPIAALLGSLMGLGGLASRSELVVMQSAGFSRFRIGLAVMKTAIPLMVLTMIMGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + + + + + F+ D + +I I + L I I + Sbjct: 121 GVPQTEQYARNMRS-IAQSGGSMLATQGGFWAKDGNDFIYIRQIQDERNLNNILIYQFDN 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 I A+ + Q +L + + +++ + L Sbjct: 180 QVLKSIKQAEKATY--SEQGWLLQKVDKSEIHESGITQTRETDQTWKTSITPSKLGIASL 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K ++S L + + + + F +++ Q + + L++I +R Sbjct: 238 KPESLSISGLAD-YVGFLKDTGQDPKRFEITFWRKVFQPISMAVMMLLAISFIFGP--LR 294 Query: 301 QRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I I + F + F + + P I L L C+S ++ L+ KK+ Sbjct: 295 SSTMGAKIVIGILTGFVFYVANIVFGNLSLVVSWLPVPIGALIPSLLCLSVVWWLLNKKR 354 >gi|223936058|ref|ZP_03627972.1| permease YjgP/YjgQ family protein [bacterium Ellin514] gi|223895280|gb|EEF61727.1| permease YjgP/YjgQ family protein [bacterium Ellin514] Length = 372 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 52/378 (13%), Positives = 119/378 (31%), Gaps = 28/378 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + Y+LR + + ++ I+ + L +++ +P+ Sbjct: 1 MRLLDRYLLRELLIPLRYCLGGFLIFWISFDLINSIHQFQEAKLHLFDVVQYYLITVPSF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L +V P + L++ R+ E+ I G S + P + + ++ S +F Sbjct: 61 LVIVLPMALLLALLYTLSNHARHHEITAIRAAGISLWRICIPYVAVGLVFSAAVFAINEY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEE--NLFF--RLDDDLYIKISKYN-PNNTLQGIFI 175 P + + K + ++ F D I YN + + Sbjct: 121 WIPDSDQKAQDILDKYKPNRPDGSNKDVYRNFGIPNGRDKRTWDIGSYNLKTEIMTDPKV 180 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAI-------ILNDGEVHRKSPISKDISIMKFKSYTL 228 A+ D + DG + + + ++ +F Sbjct: 181 SWIDTNNLPHRLIAERAERTNDVWTFYNVTEFETMPDGFMG-PTMKTNVVAHPEFSETPD 239 Query: 229 QT-----ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPV 283 Q S ++ KA + + +L+ +P + ++ H RL + Sbjct: 240 QIRREIKFSKRLTSHNAKAAEVPIVDILDYLDLHPVLTKKNKWWLYTQLHGRLAAPWTCL 299 Query: 284 IFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI----- 338 + ++I +R + S+ I F + + Y+P Sbjct: 300 VVVFLAIPFGAASG---RRNIFVGVASSIVIVFAYYVLLK--LGLALGTGGYVPAWVAGW 354 Query: 339 LYLFLFCISSIFLLMIKK 356 L F+F + I++L+ + Sbjct: 355 LPDFVFGAAGIWMLLRVR 372 >gi|332297890|ref|YP_004439812.1| permease YjgP/YjgQ family protein [Treponema brennaborense DSM 12168] gi|332180993|gb|AEE16681.1| permease YjgP/YjgQ family protein [Treponema brennaborense DSM 12168] Length = 381 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 60/371 (16%), Positives = 135/371 (36%), Gaps = 21/371 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 LY+++ + F ++ +F + +V QIL V L +LK+ Y +P ++ Sbjct: 16 VLILYLVKELLLYFFIAFVFFFMVFFVNQILLMAEDVLKKRVPLADVLKLISYSLPFIIA 75 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 PF + L M + E+LI+ G S ++ P L L + +SI F + + Sbjct: 76 QSAPFATLVGFLMCLGRMMSDNEILILRAAGKSFAVILVPALLLGLAISILSFFVNDYLL 135 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + +L ++ LE N + + + I + T+ + D+ Sbjct: 136 PLGTISYNKLYRSILMSDPSIELESNS-IKRTESATLVIGDVS-GRTVSDLIFFDTDPQG 193 Query: 183 THKIYYAQSGSIDLDR-----------QAIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 T ++ + + I + A +L + +++ + +T Sbjct: 194 TRRVIVSGTADIVNSQNPDVLMQLDMDNARVLFFDKTEKRNYDMMSAEQTRMNVFTSSLF 253 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S+++ T + +L ++ L Y E++K+ + + F L+++ Sbjct: 254 SSSAYTNPREMTSYDLRTMIRNMKTQQEKSSLQLNMYELEYYKKFSLPFGSLFFALLAMP 313 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI--LYLFLFCISS- 348 A + + + I L I +W + ++L C+ + Sbjct: 314 IAIL--FGKHNGQTIGLIIGLFICVA-YWAAMILGQTFGIREGLSGFWTMWLPDLCVGAA 370 Query: 349 --IFLLMIKKK 357 F L++ ++ Sbjct: 371 GCAFYLVLVRR 381 >gi|182677588|ref|YP_001831734.1| permease-like protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182633471|gb|ACB94245.1| permease-like protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 386 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 49/364 (13%), Positives = 122/364 (33%), Gaps = 12/364 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + LY+ R I S LM + + + + + + L + +PTVL Sbjct: 3 RLLTLYLTRRIALSVLMIEASLCLPLVMTSLFSALPPAAVRGGLIWPALLGT---LPTVL 59 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + M + ++ + S ++ P + +A++ F + + + Sbjct: 60 YIALPMAVGIAIALEFYRMASEGMIAVLYSLRLSVWSICLPGIVIAMVCVFFGYFVASFV 119 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNTLQGIFIVDSRD 180 P + + + +L LE F+ D+ + ++ ++ + G+FI D Sbjct: 120 APNYVGQMHDVVHVIRNSLNHRMLEPAHFYTFDNGSKTLYFQRWRSSDVVSGMFIHQFSD 179 Query: 181 -TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + +I A + ++L+DG + + + I F Y + + + Sbjct: 180 EKKEEEIITASIAEFRRNENGVMLVLSDGSIESRPEGATAIHTAHFDEYVIPIDMQGTGG 239 Query: 238 IVLKANDQNLSFL----LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + K N + + + P + SE KR + ++++ Sbjct: 240 MP-KRNWRGVFEVPALEFFRERPQQADDPRRFSEWTSEATKRFAVPFLALSHTILAMGLV 298 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 A R + + + + Q+P + ++ L + + + Sbjct: 299 LTLANATGRSTKAGLTAFIVVPLAHILILIGAETLVRQDPRLVWLVGLAIAAELGVGCYL 358 Query: 354 IKKK 357 + +K Sbjct: 359 LYRK 362 >gi|303258296|ref|ZP_07344303.1| permease YjgP/YjgQ [Burkholderiales bacterium 1_1_47] gi|302859049|gb|EFL82133.1| permease YjgP/YjgQ [Burkholderiales bacterium 1_1_47] Length = 364 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 42/265 (15%), Positives = 94/265 (35%), Gaps = 17/265 (6%) Query: 22 FIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMN 81 + I I +++ +N + +L++ Y LP + + L Sbjct: 1 MLFSIVVTIGLVRILNQTAGGRYDTGSILEVVAYTSLINLPALISLALFLAVFMTLNRYW 60 Query: 82 RNTELLIIDNT-GTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLAL 140 R++E+ + + G S + I+PVL A+ + + + + P R+ ++ + Sbjct: 61 RDSEMFVWFSAGGLSLTSWIRPVLRFALPVVLVVAACSIAVSPWSRAQVQAYRDRFAQKE 120 Query: 141 TFSYLEENLFFRLDDDLYIKISK--YNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDR 198 S L F + + ++ + +V+ + + + + G I+ Sbjct: 121 DISKLSSGRFIEAKSGRQVFFLEGVDQEKGKVKTLLMVELKKDGSRSVLVSDRGHIENKP 180 Query: 199 QA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS-TIVLKANDQNLSFLLNPN 254 I+L+DG + P S+ F+ Y ++ +S+ S K N + L+ Sbjct: 181 NGDRYIVLDDGRKYDTKPSGLGASVSDFREYEIRMDSSPSEVGANKKLNAMPIEDLIKRT 240 Query: 255 PNNPNYRPELLETYRSEFHKRLTQW 279 N SE R++ Sbjct: 241 DN----------RAASELFWRISWP 255 >gi|169797502|ref|YP_001715295.1| hypothetical protein ABAYE3538 [Acinetobacter baumannii AYE] gi|184156574|ref|YP_001844913.1| permease [Acinetobacter baumannii ACICU] gi|213155684|ref|YP_002317729.1| permease YjgP/YjgQ family protein [Acinetobacter baumannii AB0057] gi|215484938|ref|YP_002327177.1| hypothetical protein ABBFA_003301 [Acinetobacter baumannii AB307-0294] gi|239502070|ref|ZP_04661380.1| hypothetical protein AbauAB_07127 [Acinetobacter baumannii AB900] gi|260556394|ref|ZP_05828613.1| permease YjgP/YjgQ family protein [Acinetobacter baumannii ATCC 19606] gi|301346543|ref|ZP_07227284.1| hypothetical protein AbauAB0_09866 [Acinetobacter baumannii AB056] gi|301512955|ref|ZP_07238192.1| hypothetical protein AbauAB05_15269 [Acinetobacter baumannii AB058] gi|301594833|ref|ZP_07239841.1| hypothetical protein AbauAB059_03452 [Acinetobacter baumannii AB059] gi|332851502|ref|ZP_08433499.1| permease, YjgP/YjgQ family [Acinetobacter baumannii 6013150] gi|332866798|ref|ZP_08437202.1| permease, YjgP/YjgQ family [Acinetobacter baumannii 6013113] gi|332874942|ref|ZP_08442793.1| permease, YjgP/YjgQ family [Acinetobacter baumannii 6014059] gi|169150429|emb|CAM88326.1| conserved hypothetical protein; putative membrane protein [Acinetobacter baumannii AYE] gi|183208168|gb|ACC55566.1| predicted permease [Acinetobacter baumannii ACICU] gi|193076100|gb|ABO10704.2| putative membrane protein [Acinetobacter baumannii ATCC 17978] gi|213054844|gb|ACJ39746.1| permease YjgP/YjgQ family protein [Acinetobacter baumannii AB0057] gi|213988459|gb|ACJ58758.1| conserved hypothetical protein [Acinetobacter baumannii AB307-0294] gi|260410449|gb|EEX03748.1| permease YjgP/YjgQ family protein [Acinetobacter baumannii ATCC 19606] gi|322506461|gb|ADX01915.1| permease [Acinetobacter baumannii 1656-2] gi|323516340|gb|ADX90721.1| permease [Acinetobacter baumannii TCDC-AB0715] gi|332729955|gb|EGJ61286.1| permease, YjgP/YjgQ family [Acinetobacter baumannii 6013150] gi|332734406|gb|EGJ65526.1| permease, YjgP/YjgQ family [Acinetobacter baumannii 6013113] gi|332736885|gb|EGJ67861.1| permease, YjgP/YjgQ family [Acinetobacter baumannii 6014059] Length = 356 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 52/359 (14%), Positives = 136/359 (37%), Gaps = 11/359 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y+ + + + + + + + L + + + + + P L Sbjct: 5 RIVAKYVTKTTALAMFGTTIVLSVLQILFTYLGELGELKPDYNAWQAFI-YVLWGAPRYL 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ N+EL+++ + G S ++ V+ A+LL + F + Sbjct: 64 YEILPISALIGAVIGLGALASNSELIVMRSVGISLWRIVGWVMRSALLLIVLSFALSEWV 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SRD 180 P + + K+ ++ + + R + +I I N L+ I +VD ++D Sbjct: 124 VPYTNEKAQSV--KSHRSVAALGEVKGYWSR-EGQRFIYIDYANSQGNLRDIQVVDFNKD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + A+ G D Q + ++ + + ++ +S L + + L Sbjct: 181 YHLQSLINAEQGKFIQDGQWTLQKASQMDILTDGNSILNNHDQQSLGLALQPKYVHMVTL 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 D + S L++ Y ++ +TY+ F +++ + L++ +R Sbjct: 241 DPEDLSPSQLISFMRYMDEYS-QVPKTYQLAFWQKVASPFSLITLVLVACSFIFGP--LR 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKI---EQNPYYIPILYLFLFCISSIFLLMIKK 356 Q+ + I+L I G ++ ++ + +P + ++ + L + +LL + Sbjct: 298 QQSMGFRLVIALFIGLGFYYLQDFLGYASLVYAPSPAWFVLMPIILMFGAGSYLLYRAR 356 >gi|163788154|ref|ZP_02182600.1| hypothetical protein FBALC1_07233 [Flavobacteriales bacterium ALC-1] gi|159876474|gb|EDP70532.1| hypothetical protein FBALC1_07233 [Flavobacteriales bacterium ALC-1] Length = 637 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 43/274 (15%), Positives = 98/274 (35%), Gaps = 17/274 (6%) Query: 24 VFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRN 83 +FI + + I ++ + + K Y +P ++P+V P + + V + N Sbjct: 1 MFIFVLQGVWLYIAELAGKDLDVAVTAKFIMYYMPKLIPLVVPLTVLLSSIMVFGNFAEN 60 Query: 84 TELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFS 143 E + +TG S ++ + + L I F N + P L Sbjct: 61 YEFAAMKSTGISLQRAMRSLSVFIVALGIGCFFFANNVIPWGEYNFYNLRRNIAKKKPAL 120 Query: 144 YLEENLFFRLDDDLYIKISKYNPNNT--LQGIFIVDSRDT--QTHKIYYAQSGSIDLDRQ 199 + E F + ++ IK+ + + +N L+ + I + T + + +++G + Sbjct: 121 AIAEGQFNEI-GNINIKVEEKSGDNGQFLKNVIIHEKSKTRGGNYTVIASKNGELKSSPD 179 Query: 200 ----AIILNDGEVHRKSPISKDISIMK-------FKSYTLQTESANSSTIVLKANDQNLS 248 + L +G +++ F Y + + +T L + Sbjct: 180 SNILQLELTNGNRYQEIINKNRSKNKNLPHTNSYFDKYIINVDLEILNTGDLDEKNHTDR 239 Query: 249 FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFP 282 + + + NY + L+ R +K L+ L+ Sbjct: 240 YSML-DVEQLNYTIDSLKDKRRNDYKALSNTLYN 272 Score = 43.4 bits (101), Expect = 0.055, Method: Composition-based stats. Identities = 18/107 (16%), Positives = 39/107 (36%), Gaps = 4/107 (3%) Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + + +L+ N + +L + H + +I V A AL+R+ Sbjct: 315 SSNSTRQILDSNKKTFEKKSIILNKHIIVLHDKFVLAFACIILF---FVGAPLGALIRKG 371 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 P+ I++ + F ++ F + + PIL +L + Sbjct: 372 GLGLPMVIAI-VLFLTYYFFGIFAKNSAEKGSFSPILGSWLSTAIML 417 >gi|187931969|ref|YP_001891954.1| hypothetical protein FTM_1332 [Francisella tularensis subsp. mediasiatica FSC147] gi|187712878|gb|ACD31175.1| conserved hypothetical protein [Francisella tularensis subsp. mediasiatica FSC147] Length = 360 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 62/357 (17%), Positives = 126/357 (35%), Gaps = 10/357 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 E Y + I +F LFI+ I +++ S ++ ++K IP + Sbjct: 2 ILEKYYNKDIVNTFTSITLFIISIVSANLLIRLFQEAYSQGLGIDSIVKFVILTIPENVS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + N E+ + G + + ++K L + L+I I+ + Sbjct: 62 LVAPIAIFLAIVICFGKYFANNEMFVTIAGGITWMQIVKNTLKPVVALTIITLITVMYLN 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR-DT 181 P + T+ A S + + + D I I + N L +F+ + Sbjct: 122 PLSKQTLDIYRASLSAKALLSSITDQKIIKAPDGKIIYIGNKS-GNILSDVFLYQNTPQD 180 Query: 182 QTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +K+ A + I D+ A I + ++ K+ + + S K + Sbjct: 181 GEYKVMTAPTAKIVSDKTAAYIDFMNVNIYTKNSQNSEYSYDNAKKAIYTIFDNSDRDYN 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 D+ L N N+ N Y++EF R+ + ++ L+++ R Sbjct: 241 HDRVDRLYMHTLIENFNDKN----NGTAYKAEFLGRINNAISVIVSSLLALALCRLRPRQ 296 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + K+ P + L+I F + P +I +L + + I+K Sbjct: 297 NKYAKLLPSVVVLAIYLCTNM-FINTLMANRSVPVWIGF-WLPHIFFTIFAVRTIRK 351 >gi|127511874|ref|YP_001093071.1| permease YjgP/YjgQ family protein [Shewanella loihica PV-4] gi|126637169|gb|ABO22812.1| permease YjgP/YjgQ family protein [Shewanella loihica PV-4] Length = 352 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 55/350 (15%), Positives = 130/350 (37%), Gaps = 15/350 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +LYI R + + + L + ++ +I+ + +I LV T ++ +LIP Sbjct: 1 MRILDLYIARVLLSTSALCLLVLTGLSGIIKWVDQIRLVGRGTYTMVDAGIYVLFLIPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + + N+EL+++ + G SR + + A+ L + + Sbjct: 61 IEMFFPMAVLLGALIGMGMLASNSELVVMQSAGLSRFQITLSAMKTAVPLMLLVMALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P K+L A + ++ + D DL++ I + N+L I + + D Sbjct: 121 GAPVAERHGKELQAVKLSGGSLFKSSRGIWAK-DGDLFVNIGEIEDINSLHNIVLYEFDD 179 Query: 181 TQTHK-IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 A+ G D ++ D + +P ++ + + S + Sbjct: 180 KLNLVGTIEARRGVYSKDHWRLL--DVRQTKITPEQVSLTDLTLYRWESTLTPDKLSVVS 237 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 +K ++ L++ + Y +++ Q + + L+++ Sbjct: 238 VKPEALSIQGLVD-YLEYLRVNNQDSGRYELALWRKIMQPITVAVMMLVALSFVFGP--- 293 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 + + + + GV GFS+ I P + ++Y + ++ Sbjct: 294 -----LRTVTMGARVLLGVVAGFSFYICNEIFGP--MTLVYGLPAVLGAV 336 >gi|116330556|ref|YP_800274.1| permease [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116124245|gb|ABJ75516.1| Permease [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 606 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 44/269 (16%), Positives = 86/269 (31%), Gaps = 34/269 (12%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 YIL I FL++ F + V+ + + I L LL GYL+ LP Sbjct: 106 ILNRYILGEILSPFLVALAFFTMVYMVLALQKMIGLFVGKGVDPLRLLDYFGYLLANTLP 165 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M P M ++ ++E+ I + G S + L ++++ + + Sbjct: 166 MTIPMACLMSGIMAAGRLSGDSEITAIRSAGVSFPRIYINFLAFGFVMALVVAYLNFYLS 225 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFF-RLDDDL------YIKISKYNPN-NTLQGIF 174 P+ + + + + F DL + N + L+G+ Sbjct: 226 PENTRKMNEFNKWVLAYNPLLAITPGQFSGDKTQDLFEKRARTMYTDGMNSDTGQLKGVQ 285 Query: 175 IVD-------------------SRDTQTHKIYYAQSGSIDLD-------RQAIILNDGEV 208 I + ++ +I A G++ ++I L DG + Sbjct: 286 IREWEIFLEGNEYFNLGGKMIPMGGSRIIQIINAGKGNLVEKIGPDGEYEKSIRLKDGWI 345 Query: 209 HRKSPISKDISIMKFKSYTLQTESANSST 237 S K S+ F++ + Sbjct: 346 LEWSDDRKSFSVTDFRNGEMDYNIPKGKE 374 Score = 42.3 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 36/95 (37%), Gaps = 1/95 (1%) Query: 262 PELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWG 321 ++L + E H+R+ + +IF IS + + L I F F Sbjct: 469 KKVLTDFNVEIHRRIAMPISCLIFFFISFPLGLVVKRSGKGMSFTLAVVFLMIYFTFFTL 528 Query: 322 FSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 S I + + + P L + SI + MIK+ Sbjct: 529 GSTISYNDKVPDWIGPWSANILIALLSINI-MIKR 562 >gi|301059203|ref|ZP_07200141.1| permease, YjgP/YjgQ family [delta proteobacterium NaphS2] gi|300446693|gb|EFK10520.1| permease, YjgP/YjgQ family [delta proteobacterium NaphS2] Length = 358 Score = 113 bits (283), Expect = 5e-23, Method: Composition-based stats. Identities = 47/357 (13%), Positives = 118/357 (33%), Gaps = 14/357 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+L+ + ++ L + + +I I+ + ++++ + IP + Sbjct: 1 MNVLTRYLLKEFFKLLIVCQLVFIALYLMIDFASGIDDFIKAGAPKSVMIAYFAFKIPAI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + M RN E++ + +G + + +P++ LA LS+ LF Sbjct: 61 AGQMLPPAVLTTVIILFSLMKRNNEVVALKASGVNTWQVAQPLVLLAAFLSVVLFFFSET 120 Query: 121 IEPKCRSTIKQ-LSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI--FIVD 177 I P S + + + + +N + + I +++ + F Sbjct: 121 IVPYASSRCNEIWRIEVKKEHPGRFHGQNHVWYKGKNCIYFIKQFDSRKMMMVDPTFYFF 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + + + + +G V + + KF ++ + Sbjct: 181 DDKFKIARRIDGRRAIWKENGWQV--QNGIVQNREKDGG-YDLQKFDHLEVKLDENPKDF 237 Query: 238 IVLKANDQNLSFL-LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 I + + + L Y E + ++ +I L+ I A Sbjct: 238 IRENVEPEEMGYRQLKRFAQRLKLEGYDANRYFVELNIKIAFPFIVLIMTLMGIPIAL-- 295 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 KK +++SI + + + I+ + + LF +++ L Sbjct: 296 -----WKKGMGTPVAVSIGIALCFVYLLILGLARTLGFAGILPPLFSAWLANSIFLF 347 >gi|116327644|ref|YP_797364.1| permease [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116120388|gb|ABJ78431.1| Permease [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 606 Score = 113 bits (283), Expect = 5e-23, Method: Composition-based stats. Identities = 44/269 (16%), Positives = 86/269 (31%), Gaps = 34/269 (12%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 YIL I FL++ F + V+ + + I L LL GYL+ LP Sbjct: 106 ILNRYILGEILSPFLVALAFFTMVYMVLALQKMIGLFVGKGVDPLRLLDYFGYLLANTLP 165 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M P M ++ ++E+ I + G S + L ++++ + + Sbjct: 166 MTIPMACLMSGIMAAGRLSGDSEITAIRSAGVSFPRIYINFLAFGFVMALVVAYLNFYLS 225 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFF-RLDDDL------YIKISKYNPN-NTLQGIF 174 P+ + + + + F DL + N + L+G+ Sbjct: 226 PENTRKMNEFNKWVLAYNPLLAITPGQFSGDKTQDLFEKRARTMYTDGMNSDTGQLKGVQ 285 Query: 175 IVD-------------------SRDTQTHKIYYAQSGSIDLD-------RQAIILNDGEV 208 I + ++ +I A G++ ++I L DG + Sbjct: 286 IREWEIFLEGNEYFNLGGKMIPMGGSRIIQIINAGKGNLVEKIGPDGEYEKSIRLKDGWI 345 Query: 209 HRKSPISKDISIMKFKSYTLQTESANSST 237 S K S+ F++ + Sbjct: 346 LEWSDDRKSFSVTDFRNGEMDYNIPKGKE 374 Score = 42.3 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 36/95 (37%), Gaps = 1/95 (1%) Query: 262 PELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWG 321 ++L + E H+R+ + +IF IS + + L I F F Sbjct: 469 KKVLTDFNVEIHRRIAMPISCLIFFFISFPLGLVVKRSGKGMSFTLAVVFLMIYFTFFTL 528 Query: 322 FSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 S I + + + P L + SI + MIK+ Sbjct: 529 GSTISYNDKVPDWIGPWSANILIALLSINI-MIKR 562 >gi|156502931|ref|YP_001428996.1| putative permease, YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|156253534|gb|ABU62040.1| putative permease, YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica FTNF002-00] Length = 360 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 63/357 (17%), Positives = 127/357 (35%), Gaps = 10/357 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 E Y + I +F LFI+ I +++ S ++ ++K IP + Sbjct: 2 ILEKYYNKDIVNTFTSITLFIISIVSANLLIRLFQEAYSQGLGIDSIVKFVILTIPENVS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + N E+ + G + + ++K L + L+I I+ + Sbjct: 62 LVAPIAIFLAIIICFGKYFANNEMFVTIAGGITWMQIVKNTLKPVVALTIITLITVMYLN 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR-DT 181 P + T+ A S + + + D I I + NTL +F+ + Sbjct: 122 PLSKQTLDIYRASLSAKALLSSITDQKIIKAPDGKIIHIGNKS-GNTLSDVFLYQNTPQD 180 Query: 182 QTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +K+ A + I D+ A I + ++ K+ + + S K + Sbjct: 181 GEYKVMTAPTAKIVSDKTAAYIDFMNVNIYTKNSQNSEYSYDNAKKAIYTIFDNSDRDYN 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 D+ L N N+ N Y++EF R+ + ++ L+++ R Sbjct: 241 HNRVDRLYMHTLIENFNDKN----NGTAYKAEFLGRINNAISVIVSSLLALALCRLRPRQ 296 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + K+ P + L+I F + P +I +L + + I+K Sbjct: 297 NKYAKLLPSVVVLAIYLCTNM-FINTLMANSSVPVWIGF-WLPHIFFTIFAVRTIRK 351 >gi|325282730|ref|YP_004255271.1| permease YjgP/YjgQ family protein [Deinococcus proteolyticus MRP] gi|324314539|gb|ADY25654.1| permease YjgP/YjgQ family protein [Deinococcus proteolyticus MRP] Length = 387 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 49/355 (13%), Positives = 123/355 (34%), Gaps = 14/355 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ FE Y+L I + + ++ + + + + + + S ++ ++ +P Sbjct: 23 MRRFETYVLSEILPLLVAALSALIVLLMLKGLEDVLAPLLAKGASPALVAQLLALNVPEA 82 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P L+ ++ ++E+ + G TL +PVL LA L+++ F + Sbjct: 83 MAFGLPLALMFAALLGLSRLSGDSEIKAALSGGIPGTTLFRPVLLLAALVTLLSFGINEV 142 Query: 121 IEPKCRSTIKQLSAKAQLALT-----FSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI 175 + + + + + + L L R D I + + TL+ + I Sbjct: 143 LVTRAKVQAQSVQRQIVLDNPRVIGLAQTAGGGLVLRDALDRAISVGSVGEDGTLRNLRI 202 Query: 176 VDSRDTQTHK-IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL---QTE 231 V + + + A+ G + + L G+ ++ ++++ F++ L + Sbjct: 203 VTMQPGLPPREVITAREGVLQEGSNVLELRGGQRVSYQ-GARPVTVLNFETGQLPVQDVQ 261 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 ++ L L L + + + +++ Q L + ++ Sbjct: 262 ASFDGGSGLDPFYLPLGTLKERTDGYRDSGIRSPGDFTA-LYRKFAQPLSALALAFFAVS 320 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCI 346 A + + +L +SF + +S E P+ I Sbjct: 321 LAL---YTFRSGLNLGLVWALLLSFAYYATWSVFRVMGENGALPAPVAAFGPDVI 372 >gi|254491744|ref|ZP_05104923.1| putative permease, YjgP/YjgQ family [Methylophaga thiooxidans DMS010] gi|224463222|gb|EEF79492.1| putative permease, YjgP/YjgQ family [Methylophaga thiooxydans DMS010] Length = 354 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 52/319 (16%), Positives = 115/319 (36%), Gaps = 3/319 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI + I S L+ L ++ + + + ++ + + +L +P Sbjct: 1 MKILQRYIAKNIIASTLLVLLVLLGLYTFMDFITELDDLGKGNYQILDILSYLALTMPKR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P M + L ++ +EL+ + G S + K VL +A LL + + + Sbjct: 61 IYELLPVAALMGSVIGLGNLASQSELVAMRAAGVSIKDINKAVLIVAGLLVVVALVMGEV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P +Q+ + +Q S E F+ D + + I + N + + + I + D Sbjct: 121 FRPIAEQKARQMQSVSQTGTVGSRSEYG-FWTRDGNHFNHIERINADGSFSNVAIYEFDD 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 +I Q+ + + + + IL+D ++S + + Q + +V+ Sbjct: 180 KHRLRILT-QAVAAEYQQDSWILSDVVQSTIDEKGVEVSSVAHARWKSQLNPGMVNIVVV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + LL + + Y F ++ L + L+++ Sbjct: 239 PPEFLPVWDLLE-YVQYLKRNHQSVAQYELAFWSKMMMPLSTAVMVLLAVPFVFGPLRST 297 Query: 301 QRKKIHPIFISLSISFGVF 319 L I F +F Sbjct: 298 PIGGRVLAGTLLGIGFHLF 316 >gi|294053783|ref|YP_003547441.1| permease YjgP/YjgQ family protein [Coraliomargarita akajimensis DSM 45221] gi|293613116|gb|ADE53271.1| permease YjgP/YjgQ family protein [Coraliomargarita akajimensis DSM 45221] Length = 372 Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats. Identities = 60/379 (15%), Positives = 124/379 (32%), Gaps = 28/379 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L+ +F+++ +V + + + + + SS + +L +P Sbjct: 1 MSLLDRYVLKEWVVAFVLTLGVVVGVLVLQNMYDSLPDLLSSNATGPEILFYYMLSLPGY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP V P F + L +++RN E++ + TG S + + + LS LF Sbjct: 61 LPTVLPITFLVSLLFSLGTLHRNNEVIAMRATGASLFRISRSLWVAGFALSGLLFYLTAE 120 Query: 121 IEPKCRSTIK----QLSAKAQLALTFSYLEE-------NLFFRLDDDLYIKISKYNPNNT 169 + P + LS A+ E R + L+ Sbjct: 121 VVPMTVERARTFIDNLSYTAKEKKQDVDAREVGLLHNLGFDNRKEGRLWFMNRFSERAWL 180 Query: 170 LQGIFIVDSR-DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD-ISIMKFKSYT 227 G+ + D A+ G D + + G + P + D I ++ F+ Sbjct: 181 AIGVNVHTRTADGIEVLRVSAEEGFYDEVKGYWVFLRGRELQIDPDTGDEIRLLSFEEKA 240 Query: 228 LQTESANSS---TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVI 284 + + + K N+ +L L P + Y + + L ++ Sbjct: 241 YPEYTEDPDLMLAMHKKPNELSLLELREIIETVPAEENPAVHAYTTRYFSLLAAPFSCLV 300 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI-----EQNPYYIPIL 339 I++ A + +P+ I +S G F F +I Sbjct: 301 LVGIAVPFAVSGV------RANPM-IGISKCMGYFAVFYVLITISSILGERHMIAPWLAA 353 Query: 340 YLFLFCISSIFLLMIKKKY 358 +L F + + + + + Sbjct: 354 WLPNFAMLVVSMWLYLRAR 372 >gi|319762859|ref|YP_004126796.1| permease yjgp/yjgq family protein [Alicycliphilus denitrificans BC] gi|317117420|gb|ADU99908.1| permease YjgP/YjgQ family protein [Alicycliphilus denitrificans BC] Length = 366 Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats. Identities = 54/373 (14%), Positives = 127/373 (34%), Gaps = 25/373 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ I R + L + + + ++ + V S+ ++ L +P Sbjct: 1 MKTIRRLIYREVIVGVAFVTLAFLALFFFFDLVDELRWVGSNGYRMSHALLFVALSLPQH 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + T V+ + +++E I+ +G + +L L F + Sbjct: 61 LYELLPITVLIGTIFVMARLAQSSEFTIMRTSGLGPWRALSTLLTLGCAFVALTFAVGDY 120 Query: 121 IEPKCRSTI----KQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQG--IF 174 + P Q + T ++L+E + D + + P+ ++ +F Sbjct: 121 LAPISERAAALVRAQQLGQISTGATGAWLKE---RQGDHSFAVNVRALTPDGHMRDVRVF 177 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTL----Q 229 D+R + A + D A L + + DI + + + TL + Sbjct: 178 EFDAR-GRVASTTVAAQATFDDSGDAWNLEQVKRSVFEQRPNGDIRVTRRQEPTLLLHTR 236 Query: 230 TESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 + +LK + L + + + + Y EF +++ L ++ ++S Sbjct: 237 ISPDMVAASLLKPDKMATIGLFH-YIRHLEANGQSAQRYEIEFWRKVFYPLSCLVMVVLS 295 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYI----PILYLF 342 + A R +F + F F + + +P+ ++Y Sbjct: 296 LPFA--YLHFRSGGIAGYVFGGVMAGISFFLLNNVFGFAGNLQNWSPWLTAAAPGLIYSL 353 Query: 343 LFCISSIFLLMIK 355 L + +L++ + Sbjct: 354 LSLAAFGWLVLRR 366 >gi|121594279|ref|YP_986175.1| permease [Acidovorax sp. JS42] gi|120606359|gb|ABM42099.1| permease YjgP/YjgQ family protein [Acidovorax sp. JS42] Length = 369 Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats. Identities = 55/376 (14%), Positives = 132/376 (35%), Gaps = 28/376 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTES---LNILLKISGYLI 57 MK+ +I R + L + + + ++ + V + + L+ L + Sbjct: 1 MKTIRRFIYREVVVGVAFVTLAFLALFFFFDMVDELRWVGRAGANGYQLSHALLFVALSL 60 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 P +L + P + T V+ + +++E I+ +G + +L L + I Sbjct: 61 PQLLYELLPITVLIGTIFVMARLAQSSEFTIMRTSGLGPWRALSTLLMLGCAFVMVTVIV 120 Query: 118 ENIIEPKCRSTI----KQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQG- 172 + I P + + T ++L+E + D + + + +PN ++G Sbjct: 121 GDYIAPASEKAASLVKARRLGQISTGATGAWLKE---RQGDHSIAVNVRAVDPNGAMRGV 177 Query: 173 -IFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI-SKDISIMKFKSYTL-- 228 +F D+R + A+ + D R A L + + + + + TL Sbjct: 178 RVFEFDAR-GRVAATIQAEQATFDDARDAWNLQQVQRTLFEAEADGGMRVSRLQEPTLRW 236 Query: 229 --QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFG 286 + + +LK + L + + + Y EF +++ L ++ Sbjct: 237 PTRISPDMVAASLLKPDKMATIELFR-FVRHLEANGQSAQRYEIEFWRKVFYPLSCLVMV 295 Query: 287 LISIVAADKRALVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYI----PIL 339 ++S+ A R +F + F F + + +P+ ++ Sbjct: 296 VLSLPFA--YLHFRSGGIAGYVFGGVMAGISFFLLNNVFGFAGNLQNWSPWLTAAAPGLI 353 Query: 340 YLFLFCISSIFLLMIK 355 Y L + +L++ + Sbjct: 354 YSVLSLAAFGWLVLRR 369 >gi|294139611|ref|YP_003555589.1| hypothetical protein SVI_0840 [Shewanella violacea DSS12] gi|293326080|dbj|BAJ00811.1| conserved hypothetical protein [Shewanella violacea DSS12] Length = 352 Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats. Identities = 52/355 (14%), Positives = 131/355 (36%), Gaps = 15/355 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK +LYI R + + + L + ++ +I+ + ++ +V + ++ +LIP Sbjct: 1 MKILDLYIARTLVSASALCLLILTGLSGIIKWVDQLRVVGRGSYTMLDAGIYVLFLIPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + ++ +EL+++ + G SR + + A+ L + + + Sbjct: 61 IEMFFPMAVLLGALIGMGTLASGSELVVMQSAGLSRFQITLSAMKTAVPLMLMIMVLGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P +L A + ++ + D DL++ I + N L I + + Sbjct: 121 GAPAAERRANELQAFKVSGGSLIKSSRGIWAK-DGDLFVNIGEVENINRLHNITLYEFDS 179 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 T K +A+ G D +I D + ++ + + S + Sbjct: 180 TLTLVKTIHAERGVYSNDHWRLI--DVRQTDLTKDKVTLTDLTLYRWDSTLTPDKLSVVS 237 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 +K ++ L+ + + Y +++ Q + + L+++ Sbjct: 238 VKPESLSIQGLMG-YLDYLKVNNQDSGRYELALWRKIMQPVTVAVMMLVALSFVFGP--- 293 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + + + + GV GF++ I P + ++Y + ++ +I Sbjct: 294 -----LRTVTMGARVLLGVIAGFTFYISSEIFGP--LTLVYGLPAFLGAVMPALI 341 >gi|262370180|ref|ZP_06063507.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] gi|262315219|gb|EEY96259.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] Length = 356 Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats. Identities = 53/360 (14%), Positives = 131/360 (36%), Gaps = 13/360 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + ++ + + L + + + + L + + L+ + P L Sbjct: 5 RIVAKHVTKTTAMAMLGATAILSVLQILFTYLGELGSL-KEGYGAWDALRYVLWGAPQYL 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + + L ++ N+EL+++ + G S ++ V+ A++L + F + Sbjct: 64 YEILPIAALIGSVLGLGTLASNSELIVMRSVGVSLWRIVGWVIRSALILVVLSFALSEWV 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEE-NLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P K + T + L E ++ + +I + N L+ + +VD + Sbjct: 124 IPYTNEQAKG----VKSHRTAAELGEVRGYWTREGQRFIYVDYANSQGQLKNVQVVDFDN 179 Query: 181 TQTHK-IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 K + A+ G D + I+ N +V + L + + Sbjct: 180 NARLKGVLNAEQGQFVQDGRWILENTAQVDLLPTGNATAQKAAETPLALALQPKYVHMVT 239 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + D + S L++ Y ++ +TY+ F +++ + LI+ + Sbjct: 240 IDPEDLSPSQLVSFMSYMHEYS-QVPKTYQLAFWQKVASPFALIALVLIACSFIFGP--L 296 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKI---EQNPYYIPILYLFLFCISSIFLLMIKK 356 RQ+ + I+L G F+ ++ + +P + + + L ++ +LL + Sbjct: 297 RQQSMGFRLVIALFTGLGFFYLQDFLGYASLVYSPSPAWFVFVPILLMFVAGGYLLQRAR 356 >gi|330824939|ref|YP_004388242.1| permease YjgP/YjgQ family protein [Alicycliphilus denitrificans K601] gi|329310311|gb|AEB84726.1| permease YjgP/YjgQ family protein [Alicycliphilus denitrificans K601] Length = 366 Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats. Identities = 54/373 (14%), Positives = 127/373 (34%), Gaps = 25/373 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ I R + L + + + ++ + V S+ ++ L +P Sbjct: 1 MKTIRRLIYREVIVGVAFVTLAFLALFFFFDLVDELRWVGSNGYRMSHALLFVALSLPQH 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + T V+ + +++E I+ +G + +L L F + Sbjct: 61 LYELLPITVLIGTIFVMARLAQSSEFTIMRTSGLGPWRALSTLLALGCAFVALTFAVGDY 120 Query: 121 IEPKCRSTI----KQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQG--IF 174 + P Q + T ++L+E + D + + P+ ++ +F Sbjct: 121 LAPISERAAALVRAQQLGQISTGATGAWLKE---RQGDHSFAVNVRALTPDGHMRDVRVF 177 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTL----Q 229 D+R + A + D A L + + DI + + + TL + Sbjct: 178 EFDAR-GRVASTTVAAQATFDDSGDAWNLEQVKRSVFEQRPNGDIRVTRRQEPTLLLHTR 236 Query: 230 TESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 + +LK + L + + + + Y EF +++ L ++ ++S Sbjct: 237 ISPDMVAASLLKPDKMATIGLFH-YIRHLEANGQSAQRYEIEFWRKVFYPLSCLVMVVLS 295 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYI----PILYLF 342 + A R +F + F F + + +P+ ++Y Sbjct: 296 LPFA--YLHFRSGGIAGYVFGGVMAGISFFLLNNVFGFAGNLQNWSPWLTAAAPGLIYSL 353 Query: 343 LFCISSIFLLMIK 355 L + +L++ + Sbjct: 354 LSLAAFGWLVLRR 366 >gi|260551089|ref|ZP_05825293.1| permease YjgP/YjgQ family protein [Acinetobacter sp. RUH2624] gi|260405856|gb|EEW99344.1| permease YjgP/YjgQ family protein [Acinetobacter sp. RUH2624] Length = 356 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 51/359 (14%), Positives = 134/359 (37%), Gaps = 11/359 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y+ + + + + + + + L + + + + + P L Sbjct: 5 RIVAKYVTKTTALAMFGTTIVLSVLQVLFTYLGELGELKPDYNAWQAFI-YVLWGAPRYL 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ N+EL+++ + G S ++ V+ A+LL + F + Sbjct: 64 YEILPISALIGAVIGLGALASNSELIVMRSVGISLWRIVGWVMRSALLLIVLSFALSEWV 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SRD 180 P + + K+ ++ + + R + +I I N L+ I +VD ++ Sbjct: 124 VPYTNEKAQSI--KSHRSVAALGEVKGYWSR-EGQRFIYIDYANSQGNLRDIQVVDFDKE 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + A+ G D Q + + + + ++ +S L + + L Sbjct: 181 YHLQSVINAEQGKFIKDGQWSLQKASQTDILTDGNSILNNHDQQSLGLALQPKYVHMVTL 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 D + S L++ Y ++ +TY+ F +++ + L++ +R Sbjct: 241 DPEDLSPSQLISFMRYMDEYS-QVPKTYQLAFWQKVASPFSLITLVLVACSFIFGP--LR 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKI---EQNPYYIPILYLFLFCISSIFLLMIKK 356 Q+ + I+L I G ++ ++ + +P + ++ + L + +LL + Sbjct: 298 QQSMGFRLVIALFIGLGFYYLQDFLGYASLVYAPSPAWFVLVPIILMFGAGSYLLYRAR 356 >gi|193212079|ref|YP_001998032.1| permease YjgP/YjgQ family protein [Chlorobaculum parvum NCIB 8327] gi|193085556|gb|ACF10832.1| permease YjgP/YjgQ family protein [Chlorobaculum parvum NCIB 8327] Length = 383 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 49/348 (14%), Positives = 122/348 (35%), Gaps = 13/348 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + YI+R F S + +I +++ ++ S + ++ +P Sbjct: 26 LSIIDRYIIRQFLTIFFFSLASFAALFIIINLIENLDRFMSRQIPVGQIIIYYLSGLPDT 85 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +P + + V ++ +EL + G S L+KP L ++ F ++ Sbjct: 86 FLLTSPLSVLLASLFVTGKLSMQSELPALKAAGMSLSRLMKPFLLATFFITAFNLVNSCF 145 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 I P K + + EE + R + + + + N + + + + Sbjct: 146 ITPAMYDLSKGYEKRYLKSQKEQQ-EEAVHIRESKNRILTVGQINRDRQSAVSVSLETFD 204 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK---FKSYTLQTESANSS 236 ++ A S I + + + + +++ ++ +++ + L + Sbjct: 205 GSRLASRLDADSLRISSNGRHWVFYN--TKQRTFVNGRETLVANPGADTLKLALAKNTFT 262 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 I ++ NL L LE E ++ L ++ LI + Sbjct: 263 MIDADPDEMNLVQHLAFIAQKKRSGLPGLERAEVELQTKIALPLASMLIVLIGV-----P 317 Query: 297 ALVRQRKKIHPIFISLSISFGVFW-GFSYIIHKIEQNPYYIPILYLFL 343 R+++ + + S+ G+F+ G I + + P+L +L Sbjct: 318 LSTRKKRSGLALEAATSLLIGLFYLGMLKTIGSLGYDGLINPVLAAWL 365 >gi|170718033|ref|YP_001785073.1| permease YjgP/YjgQ family protein [Haemophilus somnus 2336] gi|168826162|gb|ACA31533.1| permease YjgP/YjgQ family protein [Haemophilus somnus 2336] Length = 356 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 56/356 (15%), Positives = 141/356 (39%), Gaps = 14/356 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + + YI + I + L + L +V ++ +I+ +++ + T + + +P Sbjct: 2 MNTLDRYIGKNILGTILATLLMLVGLSAIIKFVEQFRSIGKGTYDVIQATLFTLLTMPKD 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + L ++ +EL++I + G SR + V+ A+ L + I Sbjct: 62 IETFFPMAALLGSLIALGNLASRSELIVIQSAGFSRFRIGLAVMKTALPLMLITMIIGEW 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + + AKA + ++ +++ + +D +I + + + +L I+I D Sbjct: 122 GIPQTEHFARDMRAKAISGGSMLSVKNSIWAKDGND-FIYVGRITNDISLNDIYIYSFDD 180 Query: 181 TQTHKIYY-AQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + K A S + + + + + + K I+ +K +++ Sbjct: 181 KRQLKQVTHANQASFEHGKWKLSGIN-QSQIFADEIKTINRLK-DNWSTTLTPDKLGIAS 238 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L+ +++ L N + + + F +++ Q + + L+++ Sbjct: 239 LRPTSLSMTGLYN-YIKFMKETGQDAKRFELTFWQKVFQPVSVAVMMLLALSFIF----- 292 Query: 300 RQRKKIHPIFISLSISFGVFWGF-SYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + + I G+F+GF Y+I++I + + + L + L MI Sbjct: 293 ---GSLRSVTAGARIVTGIFFGFLFYVINEILGRLSLLYDIPIVLAALIPSLLFMI 345 >gi|317051998|ref|YP_004113114.1| permease YjgP/YjgQ family protein [Desulfurispirillum indicum S5] gi|316947082|gb|ADU66558.1| permease YjgP/YjgQ family protein [Desulfurispirillum indicum S5] Length = 342 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 48/359 (13%), Positives = 135/359 (37%), Gaps = 23/359 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + +++ Y+LR F + + I +++ + SL L +++ +P+ Sbjct: 2 LSTWQRYLLRECFFYFFAALASLSLIMASNSLIRMGSSTLEKGISLMSLAQLTLLSLPST 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + +++NR+ E++I+ + G S ++K +LF + +++ + + Sbjct: 62 AFITIPVSALIAAMALSSALNRSNEMVILYSAGISPFGIMKVILFASTVITGIAIANSFV 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P I+ + A +++ + +F +L D + + Sbjct: 122 LAPLASKQIQHVYADMAENVSYRVILPGVFNKLGDTTLFYYHLGREG--FHDVMVA---- 175 Query: 181 TQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 Q + A+SGS+ ++ ++L DG + + S +F + + E+A S Sbjct: 176 -QGDLVLSARSGSLVQGDESMVLLLRDGTI---VDARQGQSFTRFAVHEIPLETAVDSLR 231 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + + ++ L R E HKR + ++FG++ + + Sbjct: 232 LSYSM-MSVEQL----------RQLKGSKAILEIHKRYALSVSTLLFGVLGFMLGARGGR 280 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + + + + + + + P + + + ++F+ ++ Sbjct: 281 SGKGASVLTSLMVVLAFYLIRAIGVHSMDAGLIAPQQVEWIGPGVMAAVTVFVYFRFRR 339 >gi|313674434|ref|YP_004052430.1| permease yjgp/yjgq family protein [Marivirga tractuosa DSM 4126] gi|312941132|gb|ADR20322.1| permease YjgP/YjgQ family protein [Marivirga tractuosa DSM 4126] Length = 357 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 64/358 (17%), Positives = 125/358 (34%), Gaps = 2/358 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL+ +F+ L I+ I VI ++ + L +L G IP + Sbjct: 1 MKILDKYILKKFLSTFVFVVLIILAIVTVIDYTEKNDDFMEHNLGLIDVLPYYGAFIPWI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++TP + V + M +TE++ + +G S L+ P + A L+++ F Sbjct: 61 GNLITPITIFIAAVFVTSKMAGHTEIVAMLASGMSFRRLLVPYMIGAGLVALSSFYLNAY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF-IVDSR 179 + P T + A + F + E ++ ++ + Y + YN + F + Sbjct: 121 VIPDANKT-RIAFETAYIKKPFYFTERDIHLKIAPETYAYMESYNNQRDVGYRFTLELIE 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 D + A+ D + + D + + +++ S K L + Sbjct: 180 DKNLKEKLSARRIEWDSAQSNWKVKDWTLRKFDGLTETYSEGKELDTVLNITPKDFGNTY 239 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L+ L + + ++ Y E + R +I I ++ + K+ Sbjct: 240 GLQETLTLTELNDYISLLKERGADNVKIYLIERYIRFMAPFAAIILTFIGVILSSKKKRG 299 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 +I F+ I F I NP L F I + L + Sbjct: 300 GTGFQIALGFVIAFIFIIFFILSKAIAENSTMNPILAVWLPNITFSIVGLILYKFVPR 357 >gi|293390145|ref|ZP_06634479.1| conserved permease [Aggregatibacter actinomycetemcomitans D7S-1] gi|290950679|gb|EFE00798.1| conserved permease [Aggregatibacter actinomycetemcomitans D7S-1] Length = 355 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 49/361 (13%), Positives = 134/361 (37%), Gaps = 10/361 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + E YI + I + + L +V ++ +I+ +++ V T + + + +P Sbjct: 1 MNTLERYIGKSILGTIFATLLMLVGLSAIIKFVEQFRSVGKGTYDILQAIAYTVLTMPKD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ +EL+++ ++G SR+ + V+ + L + + Sbjct: 61 VETFFPMAALLGALIALGNLASRSELVVMQSSGFSRMRIGFAVMKTTLPLVLLTMVIGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SR 179 P+ + + +KA + ++ ++ + ++ ++ + + + L I+I + Sbjct: 121 GIPQTEQFARDMRSKAISGGSMLSVKNGIWAKDGNN-FVYVRRITDDVELNDIYIYTFNE 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 Q K+ +A + + + L + R P + + + + Sbjct: 180 QRQLEKLKHANRATFNSGK--WTLQQAKESRIQPENIQTTNRLNEEWQTNLTPDKLGVAS 237 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L+ ++S L N + + + + ++L Q + + ++++ + Sbjct: 238 LRPTSLSISGLSN-YITFLRETGQDSKNFELTYWRKLFQPISVGVMMMLALSFIFGP--L 294 Query: 300 RQRKKIHPIFISLSISFGVFW---GFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R I I + F + F P ++ LF I + +LL ++ Sbjct: 295 RSVTAGARILIGICFGFLFYVVNELFGKFSLVYNTTPLIGALMPSVLFLIITWWLLARRR 354 Query: 357 K 357 Sbjct: 355 N 355 >gi|95928710|ref|ZP_01311456.1| permease YjgP/YjgQ [Desulfuromonas acetoxidans DSM 684] gi|95135055|gb|EAT16708.1| permease YjgP/YjgQ [Desulfuromonas acetoxidans DSM 684] Length = 360 Score = 112 bits (281), Expect = 8e-23, Method: Composition-based stats. Identities = 58/368 (15%), Positives = 128/368 (34%), Gaps = 21/368 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L + +S V I ++ ++++ + ++ + + IP + Sbjct: 1 MTLIQRYLLTTFTKITSLSLAAFVGIYLLVDFFEKVDDFLEHEAAAHLYIAYFAWKIPLI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + T L + EL + G ++ P L A+LL+ F Sbjct: 61 VSQMLPLTILLGTFLTLGGFTKTNELTAMRAGGIGLQRIVTPFLVTAVLLTGINFALNEF 120 Query: 121 IEPKCRSTIKQL-SAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P + + + +L+FR + LY L+GI + Sbjct: 121 LVPVGTQRSNHIFRTEVKGKTQMLAKRNDLWFREANTLYHIQLALPEKKQLRGISLYLVD 180 Query: 180 DTQTHKI-YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT---LQTESANS 235 AQ+ + D+ V P S+ ++ K ++ L+ + Sbjct: 181 SQLNLLTRIEAQAATFKEDQ--WQAEHVTVRHFDPQSRQLTAQKEENLRLLPLKKTPEDF 238 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 T+ K + + + L + YR + H RL+ +I ++I A Sbjct: 239 GTVSGKNEELSFTQLSKISTQM-QREGLDATRYRVDMHSRLSTPFACIIMAFLAIPFAL- 296 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHK---IEQNPYYIPILYLF----LFCISS 348 Q+ + + + +SIS + F + + + P + + +F + Sbjct: 297 -----QKSRNVNLSLGISISVLIGISFFIVQSTLIALGYSTVLPPFIAAWAANIIFALVG 351 Query: 349 IFLLMIKK 356 +FLL+ + Sbjct: 352 LFLLLSTR 359 >gi|167645643|ref|YP_001683306.1| permease YjgP/YjgQ family protein [Caulobacter sp. K31] gi|167348073|gb|ABZ70808.1| permease YjgP/YjgQ family protein [Caulobacter sp. K31] Length = 409 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 58/370 (15%), Positives = 129/370 (34%), Gaps = 19/370 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + Y+LR + + V + ++L+ ++++S S+ + ++ L+P L Sbjct: 15 RLIDAYLLRLLVWPIVGCLGVTVIALLLERVLRLLDVLSQSSARFGYVTSLAANLVPHYL 74 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P F + V+T ++ +E+ + +G S + P + + + L +F I + Sbjct: 75 GLALPVAFFVALFIVITKLSDGSEIDALLASGQSLTRIAAPFVSVGVFLMVFSLIVFGYM 134 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 +P R + + +A A L F L L+ +FI Sbjct: 135 QPYSRYAYRAVMHEAINAGWNGKLNGGSFIDEPKLLMTADDADAAGQQLKRVFIRRLDVN 194 Query: 182 QTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQT----ESA 233 ++ A + + D A ++L +G+ + F T Q +A Sbjct: 195 GNEEVITAATADLRADHDAKSVTMLLRNGQRI-GVDARGAYRTLMFDQLTTQVPLAGAAA 253 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + L L + P T +E + RL + +F + A Sbjct: 254 LLRARGGDERELTLGELARQANTPNSVVPRA--TLLAELYGRLAR----ALFLPFLPLLA 307 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL----FLFCISSI 349 L +R P I + F + + ++ +P+ + +F S+ Sbjct: 308 FPLGLAAKRGNRTPGLIIAGVLLLAFQHSLQLGQSLAESGKAMPLAAIGTPWLIFTGLSL 367 Query: 350 FLLMIKKKYT 359 ++ + +K Sbjct: 368 WMFIGSRKRP 377 >gi|83814343|ref|YP_445251.1| hypothetical protein SRU_1124 [Salinibacter ruber DSM 13855] gi|83755737|gb|ABC43850.1| membrane protein, putative [Salinibacter ruber DSM 13855] Length = 410 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 42/361 (11%), Positives = 121/361 (33%), Gaps = 4/361 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 M +FE +I++ + + F++ ++ V+ ++ + ++ + +P Sbjct: 50 MSTFERHIIKRLLKGFVLFVGALLVFFIVLHWVEYSDDFLDGGATIWEVFTVFYPNYVPE 109 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ + +P + + ++ + +L+ + +G S L++P L + +L+++F+F Sbjct: 110 IIRLTSPLALFLSCIYLTGTLAQELQLVALQTSGVSLYQLMRPYLGVGLLVTVFMFGFNG 169 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDS 178 + PK + + + S + R + + + Y+ + + + Sbjct: 170 WVVPKTNEVVVRYENEYLPGNQKSVQTSEIHRRNGPNSILSVGYYDADRERAHTVSLQQL 229 Query: 179 R-DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI-SKDISIMKFKSYTLQTESANSS 236 D + + A D + L+D ++ + TLQ + + Sbjct: 230 AGDARLARRVDANRMEWDDSLEVWRLDDVTRRTFVKGETQRKRTIASLDTTLQVYPRDLA 289 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L ++ + ++ LI + A R Sbjct: 290 RSKNDVAAMTIPAAAEYLAALRRSGVGGLTRPLVAYYNKFAYPFANLLLVLIGVPIASTR 349 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 Q + + + V + + +P + L F + ++ +L + Sbjct: 350 RRGGQAVRFAIGLLIAFVYLSVQKLAEPLGYAGTLSPAWTAWLPHLTFAVVALLVLWWAR 409 Query: 357 K 357 K Sbjct: 410 K 410 >gi|300871686|ref|YP_003786559.1| permease YjgP/YjgQ family protein [Brachyspira pilosicoli 95/1000] gi|300689387|gb|ADK32058.1| permease YjgP/YjgQ family protein [Brachyspira pilosicoli 95/1000] Length = 431 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 42/216 (19%), Positives = 87/216 (40%), Gaps = 8/216 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI+ F+ LF FI + + + L+ ++ + L+I Y++P Sbjct: 1 MKKIKKYIILEAIGPFIAGVLFFTFIFVIQLLPELFKLILNNGAPIWTSLEIFVYMLPFN 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P M ++ + E++++ G S + + P++ L +F N+ Sbjct: 61 VAITIPMSILMAGIMGYGRLSSDNEIIVMRALGFSHMRIYAPIIILGFFTFLFSLFFNNV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIKISKYNPNNTLQGIFIVDSR 179 + + + L + + + F + D +L I Y+ NN + + I D Sbjct: 121 VMTESNYRYRALFSYIINIRPSIAVGKLEFAYISDINLSIGA-YYSDNNGMSNVVIYDG- 178 Query: 180 DTQTHKIYYAQSGSIDLDRQ-----AIILNDGEVHR 210 ++Q +I A+SG + + L DG V Sbjct: 179 NSQARRIITAKSGKWKNNEANSKVITLTLYDGIVQE 214 >gi|124023382|ref|YP_001017689.1| permease [Prochlorococcus marinus str. MIT 9303] gi|123963668|gb|ABM78424.1| possible permease [Prochlorococcus marinus str. MIT 9303] Length = 403 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 46/371 (12%), Positives = 124/371 (33%), Gaps = 21/371 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + ++L + L + + V + + + L+ L++ +P L Sbjct: 32 LLDRWLLGELIPVLLFAIAAFTVVSVSVGVMFDLVRKIVEFGLPLHFALQVFSLKLPFFL 91 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + T + ++ N+E + + G S ++ P L LA+L++ FI ++I Sbjct: 92 VISFPMATLLATLLAYSRLSSNSEFTALRSLGVSTRRIVAPALALALLMTGLTFIFNDVI 151 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLY--------------IKISKYNPN 167 P+ S+ + +A + +++ + + ++ Sbjct: 152 VPRTNSSAEVTIKRALGKAIATEKGKHVVYSRFGTITGTKAEDRNQGLSQLFYAREFLK- 210 Query: 168 NTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 ++ + ++D ++ A+ + +G + +P S ++F Y Sbjct: 211 GEMEDVTVLDLSRLGFTQMLKAERAIWNEQEAMWEFFNGNILTLTPSGSTTS-VEFDRYL 269 Query: 228 LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYR---PELLETYRSEFHKRLTQWLFPVI 284 S L + N++ + + + ++ T + ++ Sbjct: 270 YPLTSGPIRVAKLPKDANNMTVAQAMEAASIYTDAGNRKEARRLKVRIQEKFTFPMSCLV 329 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 FGLI + + R + L I FS+ + + ++ +F Sbjct: 330 FGLIG-SSLGAKPNSRTSRTQGFGISLLLILAYYTLSFSFSSLGVTGTLTPMLAAWVPVF 388 Query: 345 CISSIFLLMIK 355 + L+++ Sbjct: 389 ISLAGGGLLLR 399 >gi|113460663|ref|YP_718729.1| permease [Haemophilus somnus 129PT] gi|112822706|gb|ABI24795.1| conserved permease [Haemophilus somnus 129PT] Length = 356 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 56/356 (15%), Positives = 140/356 (39%), Gaps = 14/356 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + + YI + I + L + L +V ++ +I+ +++ + T + + +P Sbjct: 2 MNTLDRYIGKNILGAILATLLMLVGLSAIIKFVEQFRSIGKGTYDVIQATLFTLLTMPKD 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + L ++ +EL++I + G SR + V+ A+ L + I Sbjct: 62 IETFFPMAALLGSLIALGNLASRSELIVIQSAGFSRFRIGLAVMKTALPLMLITMIIGEW 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + + AKA + ++ +++ R +D +I + + + L I+I D Sbjct: 122 GIPQTEHFARDMRAKAISGGSMLSVKNSIWARDSND-FIYVGRITNDIRLNDIYIYSFDD 180 Query: 181 TQTHKIYY-AQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + K A S + + + + + + K I+ +K +++ Sbjct: 181 KRQLKQVTHANQASFEHGKWKLSGIN-QSQIFADEIKTINRLK-DNWSTTLTPDKLGIAS 238 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L+ +++ L N + + + F +++ Q + + ++++ Sbjct: 239 LRPTSLSMTGLYN-YIKFMKETGQDAKRFELTFWQKVFQPVSVAVMMMLALSFIF----- 292 Query: 300 RQRKKIHPIFISLSISFGVFWGF-SYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + + I G+F+GF Y+I++I + + + L + L MI Sbjct: 293 ---GSLRSVTAGARIVTGIFFGFLFYVINEILGRLSLLYDIPIVLAALIPSLLFMI 345 >gi|89891008|ref|ZP_01202516.1| putative permease, YjgP/YjgQ family [Flavobacteria bacterium BBFL7] gi|89516652|gb|EAS19311.1| putative permease, YjgP/YjgQ family [Flavobacteria bacterium BBFL7] Length = 357 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 61/368 (16%), Positives = 136/368 (36%), Gaps = 23/368 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K + YILR +FL+ + I + I ++I + S ++ Sbjct: 2 LKILDRYILRQYLGAFLLLLCLFIPIMITVHIAEKIGKILSKDIPFTEVMMYLLDFTIYF 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + T + + NTE++ ++G S ++P + A+L+ + + + Sbjct: 62 SNFLFPIFLFISTMFFTSKLANNTEIVAFLSSGVSYNRFLRPYIIGAVLVCVTALVFSTV 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 P + + K + N+F R+ DD Y+ +S YN T + Sbjct: 122 FVPDAAAGFNEFQFKYFKSEKERQ-TNNVFRRISDDDYVYVSNYNSGRKTGYDFTLEHFN 180 Query: 180 DTQTHKIYYAQSGSIDLD-------RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 + YA+ + ++ ++ +GE+ + +K +I+ F L S Sbjct: 181 GNELEYKIYAERIAFKDSVYTLSRYKKRVLQENGEI--LTTKAKLDTILNFDIDELTPSS 238 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + T+ + LL+ + + Y E HKR + + +IF +I++ Sbjct: 239 YVAETLSYQK-------LLDFIETEESRGNGNMNVYYVEKHKRTSIPVSALIFTIIAVAV 291 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP--ILYLFLFCISSIF 350 ++ ++ + I L I+ + E++ + P ++ + Sbjct: 292 ---SSVKKRGGMGVNLAIGLGIAMSYMFLDKVFGTIAEKSTSFEPWIAVWAPNIFFGIVA 348 Query: 351 LLMIKKKY 358 LL+I+ Sbjct: 349 LLLIRNAR 356 >gi|126175308|ref|YP_001051457.1| permease YjgP/YjgQ family protein [Shewanella baltica OS155] gi|153001630|ref|YP_001367311.1| permease YjgP/YjgQ family protein [Shewanella baltica OS185] gi|217972441|ref|YP_002357192.1| permease YjgP/YjgQ family protein [Shewanella baltica OS223] gi|125998513|gb|ABN62588.1| permease YjgP/YjgQ family protein [Shewanella baltica OS155] gi|151366248|gb|ABS09248.1| permease YjgP/YjgQ family protein [Shewanella baltica OS185] gi|217497576|gb|ACK45769.1| permease YjgP/YjgQ family protein [Shewanella baltica OS223] Length = 352 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 57/364 (15%), Positives = 132/364 (36%), Gaps = 21/364 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK +LYI R + + + L + ++ +I+ + ++ LV T S+ +L+P Sbjct: 1 MKILDLYIARVLLSTSALCLLVLTGLSGIIKWVDQLRLVGRGTYSMMDAGIYVLFLVPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + + N+EL+++ +G SR+ + + A+ L + + + Sbjct: 61 IEMFFPMAVLLGALIGMGMLASNSELVVMQASGMSRLQITMSAMKTAVPLMLLVMVLGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SR 179 P +L A +L+ + D DL++ I + N L I + + Sbjct: 121 GAPIAEQKANELQA-IKLSGGSLIKSHRGIWAKDGDLFVNIGEVENINKLNNITLYKFNS 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + + +A DR L D + S + ++ + S + Sbjct: 180 ELKLTNVVHADRAVFSQDR--WRLFDVKRTDLSYEKVVLEYLEEDQWQSSLTPDKLSVVS 237 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 +K ++ L+ + + Y +++ Q + + L+++ Sbjct: 238 IKPEALSIRGLVG-YLDYLKTNSQDPSRYELALWRKVMQPVTVAVMMLVALSFVFGP--- 293 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHK--------IEQNPYYIPILYLFLFCISSIFL 351 + + + + GV GFS+ I + + P Y+ + L F Sbjct: 294 -----LRTVTMGARVLLGVVAGFSFYISNEIFGPMSIVYELPAYVGAVAPSLLFTGVAFY 348 Query: 352 LMIK 355 + + Sbjct: 349 FIRR 352 >gi|294507117|ref|YP_003571175.1| conserved hypothetical protein, membrane [Salinibacter ruber M8] gi|294343446|emb|CBH24224.1| conserved hypothetical protein, membrane [Salinibacter ruber M8] Length = 410 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 42/361 (11%), Positives = 121/361 (33%), Gaps = 4/361 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 M +FE +I++ + + F++ ++ V+ ++ + ++ + +P Sbjct: 50 MSTFERHIIKRLLKGFVLFVGALLVFFIVLHWVEYSDDFLDGGATIWEVFTVFYPNYVPE 109 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ + +P + + ++ + +L+ + +G S L++P L + +L+++F+F Sbjct: 110 IIRLTSPLALFLSCIYLTGTLAQELQLVALQTSGVSLYQLMRPYLGVGLLVTVFMFGFNG 169 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDS 178 + PK + + + S + R + + + Y+ + + + Sbjct: 170 WVVPKTNEVVVRYENEYLPGNQKSVQTSEIHRRNGPNSILSVGYYDADRERAHTVSLQQL 229 Query: 179 R-DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI-SKDISIMKFKSYTLQTESANSS 236 D + + A D + L+D ++ + TLQ + + Sbjct: 230 AGDARLARRVDANRMEWDDSLEVWRLDDVTRRTFVKGETQRKRTIASLDTTLQVYPRDLA 289 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L ++ + ++ LI + A R Sbjct: 290 RSKNDVAAMTIPAAAEYLAALRRSGVGGLTRPLVAYYNKFAYPFANLLLVLIGVPIASTR 349 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 Q + + + V + + +P + L F + ++ +L + Sbjct: 350 RRGGQAVRFAIGLLIAFVYLSVQKLAEPLGYAGTLSPAWTAWLPHLTFAVVALLVLWWAR 409 Query: 357 K 357 K Sbjct: 410 K 410 >gi|323163036|gb|EFZ48869.1| hypothetical protein ECE128010_0632 [Escherichia coli E128010] Length = 150 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 44/150 (29%), Positives = 68/150 (45%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSSQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF 150 P + I QL ++Q L L F Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKF 150 >gi|78188283|ref|YP_378621.1| hypothetical protein Cag_0302 [Chlorobium chlorochromatii CaD3] gi|78170482|gb|ABB27578.1| conserved hypothetical protein [Chlorobium chlorochromatii CaD3] Length = 359 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 62/344 (18%), Positives = 119/344 (34%), Gaps = 5/344 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI + ++FL + L V + +I +++++ S + + IP++ Sbjct: 1 MKILERYIFQQFIKAFLFTALVFVSLFIIINMIEKLGNFMDHHVSALEIARYYLLSIPSI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +P + + V + EL I + G S L+ P + A+LL +F F + Sbjct: 61 FLVTSPVSALLASILVAGKLATQNELPAIRSAGVSMRQLLTPFAWGALLLFLFNFFNAGW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSR 179 + P S + NL + +I I +NP N +L + I Sbjct: 121 LAPTTYSHNRTFEQLYLGKNAGDQETRNLHLLDSGNRFISIGAFNPINESLNNVSIERLS 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 A S + + + S + + + L + Sbjct: 181 GATMISRIDADSMHYNRRTKRWTMWRVTERYFSNGYQSFTTKPTATIRLALRPKALHEMR 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L+ ++ L LE +FH ++ +I LI + A ++ Sbjct: 241 LQPDEITLPRHYQFLREKEEAGFSGLERSAVKFHNKIAMPFASLIITLIGVPLAARK--- 297 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 ++ I I+L I F ++ G I PI+ +L Sbjct: 298 KRGGIAAEIAITLFIGF-LYLGIQRTIAIAGYQGVLPPIVAAWL 340 >gi|319941841|ref|ZP_08016163.1| hypothetical protein HMPREF9464_01382 [Sutterella wadsworthensis 3_1_45B] gi|319804774|gb|EFW01641.1| hypothetical protein HMPREF9464_01382 [Sutterella wadsworthensis 3_1_45B] Length = 377 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 47/382 (12%), Positives = 129/382 (33%), Gaps = 30/382 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + I S + + ++ + ++ +++ + + L + +P+ Sbjct: 1 MSVISRQFAKDILLSTIFVLIVLIALFAFFDLIGQLDDLGADYTIGRAFLT-TSLTLPSR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 V P + + ++ +E ++ +G S L + +L ++ + + I Sbjct: 60 AYEVMPLAVLLASVYTMSKWASTSEFTVLRASGCSPWRLARSLLIPGVICVLATYGLGEI 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF-----FRLDDD---LYIKISKYNP-NNTLQ 171 + P + +++ + +L+ + +D YI + + + L Sbjct: 120 VAPAAQRFAQEVRSGTNASLSIRGFASGAWVRDVINSPEDGRVERYINVRNLSASDRQLT 179 Query: 172 G---IFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRK--------SPISKDISI 220 G +F + D + ++ A+SG L + + +P ++ Sbjct: 180 GAWRMFEFNRDDGRLLRLVRAESGR--WTGTGWELTNAVIIHYPAVTATKDAPQQGSVTT 237 Query: 221 MKFKSYTL-QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQW 279 + L T + + +++ D+ LN + + + E Y S F + Sbjct: 238 EHVDALKLTSTVNPDILSVMTTKPDRMSMDELNRFIEHLDQVHQDTEHYVSVFWSKAFYP 297 Query: 280 LFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYI 336 ++ +++ A R IF + + + F Y+ P + Sbjct: 298 FICLVMLAVAMPFA--YMNARSGGMAVKIFCGVLVGIAFYALNNIFLYLSVLSSMPPALM 355 Query: 337 PILYLFLFC-ISSIFLLMIKKK 357 L L C +++ L ++++ Sbjct: 356 AALPSILMCFAAALSLWWLERR 377 >gi|226357374|ref|YP_002787114.1| membrane protein; permease [Deinococcus deserti VCD115] gi|226319364|gb|ACO47360.1| putative membrane protein; putative permease [Deinococcus deserti VCD115] Length = 368 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 50/332 (15%), Positives = 118/332 (35%), Gaps = 17/332 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK FE Y+L I + + ++ + + + + I + + ++ ++ +P Sbjct: 1 MKRFERYVLAEILPLLVGALASVIVLFVLAALQEVIAPLLAKGARPLLVARVLALNVPEA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 P T L+ ++ ++EL +G L +PVL L + +++ F+ Sbjct: 61 AARALPIALMFATLLGLSRLSSDSELKAALASGIPARRLYRPVLLLGLGVTVLAFLIGEG 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSY----LEEN---LFFRLDDDLYIKISKYNPNNTLQGI 173 + P+ + +++ + E L R I + + L+ + Sbjct: 121 LLPRTKIEERKVKQEIVFDNPRVIGLGAQEPGGQSLVLRDALGRAISVGEVRAGGELRDL 180 Query: 174 FIVDSRDTQTHK-IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 IV + + + A+ G + + L G+ ++I+ F+ TL + Sbjct: 181 RIVTMQGGSVPREVITAREGRLKSGSNVLELQGGQRVTYQDGRP-VTILSFERGTLPVQD 239 Query: 233 ANSS----TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 + LKAN L LL + + + + H++ + L + Sbjct: 240 VQADLDTGGKALKANYLPLRELLARTNSYRQQHIQAPAEFTA-LHQKFAEPLAALALAFF 298 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFW 320 ++ A Q + + +L ++F + Sbjct: 299 AVSLA---VFTFQSGRDLGLVWALLLAFAYYA 327 >gi|225075101|ref|ZP_03718300.1| hypothetical protein NEIFLAOT_00100 [Neisseria flavescens NRL30031/H210] gi|224953585|gb|EEG34794.1| hypothetical protein NEIFLAOT_00100 [Neisseria flavescens NRL30031/H210] Length = 356 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 47/364 (12%), Positives = 128/364 (35%), Gaps = 14/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +I+ + + + + + + +P Sbjct: 1 MDLISRYIIRQMAVMAVYALLAFLALYSFFEIINEVGDLGKGSYNGTTMAQYVLMQMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + +EL +I +G S ++ + ++ +I Sbjct: 61 AYELMPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKILLILSQFGLIFAIATATLGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + + A A + L+ + + + I + + P++TL GI I D Sbjct: 121 IAPVLSQKAENIKAAAINGKISTGNT-GLWLK-EKNSIINVREMLPDHTLLGIKIWARND 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ + + L + S ++S +++ + + +++ Sbjct: 179 KNELTQATEAESAVLNNDGSWQLKNIRRSTLSEDKVEVSTAAEENWPIAVKRNLMDVLLV 238 Query: 241 KANDQNLSFL---LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 K + ++ L ++ NN + + Y + ++L + + L++ Sbjct: 239 KPDQMSVGELTTYISHLENN----NQNTQIYAIAWWRKLVYPVAAWVMALVAFAF--TPQ 292 Query: 298 LVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R +F + + + F + P+ L LF + +++L+ Sbjct: 293 TTRHGNMGLKLFGGICLGLLFHFAGRLFGFTSQLYGVLPFLAGALPTVLFALLAVYLIRC 352 Query: 355 KKKY 358 ++K Sbjct: 353 QEKR 356 >gi|188993099|ref|YP_001905109.1| Predicted YjgP/YjgQ family permease [Xanthomonas campestris pv. campestris str. B100] gi|167734859|emb|CAP53070.1| Predicted YjgP/YjgQ family permease [Xanthomonas campestris pv. campestris] Length = 360 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 58/370 (15%), Positives = 138/370 (37%), Gaps = 25/370 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L +SFL + + ++ ++ ++ + ++ +LL G Sbjct: 1 MPKLDRYLLSDFTQSFLATLIVLLVVSVGGVLVDILGNIADGRIPARLLLSQVGLQFVAY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP++ P + L + R++E+ +I G +++P+L+L + + + + Sbjct: 61 LPIILPLALMLGLLLALARLYRDSEMAVITAIGIGPRRMLRPILWLVVPVVVVIGACSLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSR 179 + P T + + A ++ + LE F L + ++ +P+ L +F+ + Sbjct: 121 LGPWASRTAELMLEDANRSVVMAGLESGKFTPLSGGGVVYLTTISPDGKGLGKVFMQRQK 180 Query: 180 DTQTHKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISK--DISIMKFKSYTLQTESAN 234 D + + A+ G++ + + L DG ++ D +M F S + Sbjct: 181 DDRID-VVTAERGAMFFEGKTDRYLRLEDGHRIEGPAGAQGLDYRLMTFASNDVALPDRT 239 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + + L+ + R+E H+RL L + Sbjct: 240 KAHDANDPEVMSTFKLI----------GDARPIARAELHRRLAPPLL--ALAFALLTLPL 287 Query: 295 KRALVRQRKKIHPIFISLSISFG---VFWGFSYIIHKIEQNPYYIPILYL-FLFCISSIF 350 R+ RQ++ + L+ G + G +I + + P + + +L SI+ Sbjct: 288 SRSAPRQQRYGRIMLAFLAYLVGTNLMIVGTQWIAN--GKVPGAVGLWWLTLPLLAVSIW 345 Query: 351 LLMIKKKYTK 360 + ++ Sbjct: 346 AYARDGRLSR 355 >gi|224825294|ref|ZP_03698399.1| permease YjgP/YjgQ family protein [Lutiella nitroferrum 2002] gi|224602215|gb|EEG08393.1| permease YjgP/YjgQ family protein [Lutiella nitroferrum 2002] Length = 358 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 48/360 (13%), Positives = 130/360 (36%), Gaps = 4/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YI + + L + ++ + I++ + + + + +L L+P Sbjct: 1 MKLIYRYITTQLTVATLYALAALLALYAFFDIIKEVPDLGHGSYGVPQMLLYIALLMPGH 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + +T + ++E II +G + + +L I ++ + Sbjct: 61 AYELMPLVVLIGGMVAMTQLATSSEYTIIRTSGVTLAQVAGVLLRFGIGFAVITGLLGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SR 179 P +++ A ++ ++ + D + +I + + P+NTL G+ I + Sbjct: 121 GAPFSEKQAERMKLSATKSMVTQEFHSGIWVKDDQN-FINVGEMLPDNTLLGVRIYTYDK 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 D + + +A+ G+ + L + + + + + ++ Sbjct: 180 DYRLVQTRFAERGTYQRPQHVWRLEKVKETTLGDKATTTRQLNTLDWH-SVIEPSILDVL 238 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L +Q + L + + + Y + L + L+++ ++ Sbjct: 239 LVVPEQMSAMDLTTYIEHLRSNEQKTQRYEIALWSKFFYPLACISMALVALAFTPRQRRH 298 Query: 300 RQRKKIHPIFISLSISF-GVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 Q + I L ++F V F+++ + N + L LF ++ I + + +++ Sbjct: 299 AQLGIRLFVGICLGVAFHFVNRLFAHLGLLYDWNAMFAATLPTLLFLLAGITITVRQERR 358 >gi|33862844|ref|NP_894404.1| putative permease [Prochlorococcus marinus str. MIT 9313] gi|33634760|emb|CAE20746.1| possible permease [Prochlorococcus marinus str. MIT 9313] Length = 403 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 46/371 (12%), Positives = 124/371 (33%), Gaps = 21/371 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + ++L + L + + V + + + L+ L++ +P L Sbjct: 32 LLDRWLLGELIPVLLFAIAAFTVVSVSVGVMFDLVRKIVEFGLPLHFALQVFSLKLPFFL 91 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + T + ++ N+E + + G S ++ P L LA+L++ FI ++I Sbjct: 92 VISFPMATLLATLLAYSRLSSNSEFTALRSLGVSTRRIVAPALALALLMTGLTFIFNDVI 151 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLY--------------IKISKYNPN 167 P+ S+ + +A + +++ + + ++ Sbjct: 152 VPRTNSSAEVTIKRALGKAIATEKGKHVVYSRFGTITGAEAEDWNQGLSQLFYAREFLK- 210 Query: 168 NTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 ++ + ++D ++ A+ + +G + +P S ++F Y Sbjct: 211 GEMEDVTVLDLSRLGFTQMLKAERAIWNEQEAMWEFFNGNILTLTPRGSTTS-VEFDRYL 269 Query: 228 LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYR---PELLETYRSEFHKRLTQWLFPVI 284 S L + N++ + + + ++ T + ++ Sbjct: 270 YPLTSGPIRVAKLPKDANNMTVAQAMEAASIYTDAGNRKEARRLKVRIQEKFTFPMSCLV 329 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 FGLI + + R + L I FS+ + + ++ +F Sbjct: 330 FGLIG-SSLGAKPNSRTSRTQGFGISLLLILAYYTLSFSFSSLGVTGTLTPMLAAWIPVF 388 Query: 345 CISSIFLLMIK 355 + L+++ Sbjct: 389 ISLAGGGLLLR 399 >gi|329964131|ref|ZP_08301297.1| permease, YjgP/YjgQ family [Bacteroides fluxus YIT 12057] gi|328525651|gb|EGF52680.1| permease, YjgP/YjgQ family [Bacteroides fluxus YIT 12057] Length = 633 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 86/208 (41%), Gaps = 4/208 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K +++IL+ F+ + +FI + + + ++ + + +L + Y ++ Sbjct: 4 IKKLDIFILKSFCMLFMGTFFICLFIFMMQFLWRYVDEMVGKGLEMTVLAQFFFYSALSL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P P + + ELL + G S + +++P++ + + F +N+ Sbjct: 64 VPASLPLAILLAALITFGNFGERFELLAMKAAGISLLKIMRPLIIFICFICLVSFYFQNV 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 I P+ ++ + L + + E +F+ D + + + L + I + Sbjct: 124 IGPQAQTKLWTLLLSMKQKSPEVDIPEGVFYDEIDGYNLYVKHKDRKTGMLYDVLIYNFE 183 Query: 180 DT-QTHKIYYAQSGSID--LDRQAIILN 204 + +I A SG ++ D+Q + L+ Sbjct: 184 KGFENAQIIKADSGRLEMTADKQHLYLH 211 >gi|222110916|ref|YP_002553180.1| permease yjgp/yjgq family protein [Acidovorax ebreus TPSY] gi|221730360|gb|ACM33180.1| permease YjgP/YjgQ family protein [Acidovorax ebreus TPSY] Length = 369 Score = 111 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 56/376 (14%), Positives = 131/376 (34%), Gaps = 28/376 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTES---LNILLKISGYLI 57 MK+ +I R + L + + + ++ + V + + L+ L + Sbjct: 1 MKTIRRFIYREVVVGVAFVTLAFLALFFFFDMVDELRWVGRAGANGYQLSHALLFVALSL 60 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 P L + P + T V+ + +++E I+ +G + +L L + I Sbjct: 61 PQHLYELLPITVLIGTIFVMARLAQSSEFTIMRTSGLGPWRALSTLLMLGCAFVMVTVIV 120 Query: 118 ENIIEPKCRSTI----KQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQG- 172 + I P + + T ++L+E + D + + + +PN ++G Sbjct: 121 GDYIAPASEKAASLVKARRLGQISTGATGAWLKE---RQGDHSIAVNVRAVDPNGAMRGV 177 Query: 173 -IFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI-SKDISIMKFKSYTL-- 228 +F D+R + A+ + D R A L E + + + + TL Sbjct: 178 RVFEFDAR-GRVAATIQAEQATFDDARDAWNLQQVERTLFEAEADGGMRVSRLQEPTLRW 236 Query: 229 --QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFG 286 + + +LK + L + + + Y EF +++ L ++ Sbjct: 237 PTRISPDMVAASLLKPDKMATIELFR-FVRHLEANGQSAQRYEIEFWRKVFYPLSCLVMV 295 Query: 287 LISIVAADKRALVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYI----PIL 339 ++S+ A R +F + F F + + +P+ ++ Sbjct: 296 VLSLPFA--YLHFRSGGIAGYVFGGVMAGISFFLLNNVFGFAGNLQNWSPWLTAAAPGLI 353 Query: 340 YLFLFCISSIFLLMIK 355 Y L + +L++ + Sbjct: 354 YSVLSLAAFGWLVLRR 369 >gi|329118129|ref|ZP_08246841.1| YjgP/YjgQ family permease [Neisseria bacilliformis ATCC BAA-1200] gi|327465789|gb|EGF12062.1| YjgP/YjgQ family permease [Neisseria bacilliformis ATCC BAA-1200] Length = 356 Score = 111 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 52/361 (14%), Positives = 127/361 (35%), Gaps = 14/361 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ Y++R + L + ++ + I+ + + + + IP Sbjct: 1 MKTIPRYLIRQLSVMSLYAMFALLALYSFFDIVAEAGGIGEGGYTAGKMAQYVFLQIPDH 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + L+ + N+EL +I +G S L+ L ++ + + + Sbjct: 61 AYQLMPLAVLIGSLLALSRLAANSELTVIKTSGMSTANLLTVFLIFGLIFATATALLGEL 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + L A+ + E L+ + + + + + + P+ TL+GI D Sbjct: 121 AAPAANRYAENLKTTAKNGKISTG-AEGLWIK-EQNSIVNVREMLPDQTLRGIKAFRHND 178 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ--TESANSST 237 Q + + A + ++ D L + V R + + + + Q S Sbjct: 179 AFQLIESWQADAATVAPDGT-WRLEN--VRRSILGGERVRTERHERENWQAGIRSGLLDV 235 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +++ + +L+ L + + + YR E+ ++L V+ ++ Sbjct: 236 LLVSPDQMSLAAL-TAYIAHLEENRQKTDLYRIEWWRKLMYPAATVVMAFVAFAF--TPQ 292 Query: 298 LVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R +F + + + F + P+ +L LF +++L+ Sbjct: 293 SARHGNMGLKLFGGICLGLAFHFAGRLFGFTSRLYGIPPFLAAVLPTLLFAAWAVWLIRR 352 Query: 355 K 355 Sbjct: 353 H 353 >gi|261867782|ref|YP_003255704.1| permease [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413114|gb|ACX82485.1| conserved permease [Aggregatibacter actinomycetemcomitans D11S-1] Length = 355 Score = 111 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 49/361 (13%), Positives = 133/361 (36%), Gaps = 10/361 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + E YI + I + + L +V ++ +I+ +++ V T + + + +P Sbjct: 1 MNTLERYIGKSILGTIFATLLMLVGLSAIIKFVEQFRSVGKGTYDILQAIAYTVLTMPKD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ +EL+++ ++G SR+ + V+ + L + + Sbjct: 61 VETFFPMAALLGALIALGNLASRSELVVMQSSGFSRMRIGFAVMKTTLPLVLLTMVIGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SR 179 P+ + + +KA + ++ ++ + ++ ++ + + + L I+I + Sbjct: 121 GIPQTEQFARDMRSKAISGGSMLSVKNGIWAKDGNN-FVYVRRITDDVELNDIYIYTFNE 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 Q K+ +A + + + L R P + + + + Sbjct: 180 QRQLEKLKHANRATFNSGK--WTLQQVNESRIQPENIQTTNRLNEEWQTNLTPDKLGVAS 237 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L+ ++S L N + + + + ++L Q + + ++++ + Sbjct: 238 LRPTSLSISGLSN-YITFLRETGQDSKNFELTYWRKLFQPISVGVMMMLALSFIFGP--L 294 Query: 300 RQRKKIHPIFISLSISFGVFW---GFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R I I + F + F P ++ LF I + +LL ++ Sbjct: 295 RSVTAGARILIGICFGFLFYVVNELFGKFSLVYNTTPLIGALMPSVLFLIITWWLLARRR 354 Query: 357 K 357 Sbjct: 355 N 355 >gi|289803331|ref|ZP_06533960.1| putative permease [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 258 Score = 111 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 38/253 (15%), Positives = 94/253 (37%), Gaps = 5/253 (1%) Query: 9 LRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFC 68 +R +S L ++ I + ++++ + N++L + G +P + ++ P Sbjct: 1 MRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLS 60 Query: 69 FAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRST 128 + L + +E+ ++ G S+ L+K + LA+ I ++ P Sbjct: 61 LFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMVLALFTGILAAVNVMWAGPWSSKH 120 Query: 129 IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT--HKI 186 ++ A+A+ + L + F + + + + + +F+ R + Sbjct: 121 QDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFHDVFLAQIRPKGNARPSV 180 Query: 187 YYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 A SG + Q + LN G + + +D I F++Y + + Sbjct: 181 VVADSGHLTQLRDGSQVVTLNKGTRFEGTALLRDFRITDFQNYQAIIGHQAVALDPNDTD 240 Query: 244 DQNLSFLLNPNPN 256 ++ L N + + Sbjct: 241 QMDMRTLWNTDND 253 >gi|262038164|ref|ZP_06011561.1| permease, YjgP/YjgQ family [Leptotrichia goodfellowii F0264] gi|261747812|gb|EEY35254.1| permease, YjgP/YjgQ family [Leptotrichia goodfellowii F0264] Length = 358 Score = 111 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 61/364 (16%), Positives = 128/364 (35%), Gaps = 21/364 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI+ +SF + + I + + + + +L +K Y IP + Sbjct: 1 MNKLDKYIILNYIKSFFLGMMMFFLIFILAESINLTGWIMDGKFTLGEAVKYLSYGIPEI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + ++ M + E+ + G S + + K L + +S+ + Sbjct: 61 VTNTAPLGILLGSLLAISKMAKQLEITAMKTGGISFLRIAKFPLIFSFFVSLSVLYVNVD 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFF--RLDDDLYIKISKYN-PNNTLQGIFIVD 177 I K S K +L E F ++D + + N + ++ + I++ Sbjct: 121 ILGKSNSK-KSNMKLLKLEQAEPVKVEKNFILVKIDKNRILYSGYVNKKDGIMREVEIIE 179 Query: 178 SRD--TQTHKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESAN 234 D +Y A G+++ + + H + +SK+I FK L+ + Sbjct: 180 MADEFKNVKTVYTASEGALEKGTDNWTFTNLKEHNIMTNVSKNIDPGVFK---LKIPIDD 236 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 +KA + + L + ++ +F+ R++ L + I + Sbjct: 237 ILADPVKAKNLTMPELREKIVYFTRVGADSIDLLI-DFYYRISFALASFVMCFIGLSLG- 294 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP-----ILYLFLFCISSI 349 R + + I LS+ G + I K + IP L L ++ I Sbjct: 295 ----SRYVRGGAAVNIGLSVIIGYSYYGFSTIMKSLASTGTIPVYIACFLPLLIYLGVGI 350 Query: 350 FLLM 353 L M Sbjct: 351 KLFM 354 >gi|87121691|ref|ZP_01077578.1| permease YjgP/YjgQ [Marinomonas sp. MED121] gi|86162942|gb|EAQ64220.1| permease YjgP/YjgQ [Marinomonas sp. MED121] Length = 353 Score = 111 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 49/362 (13%), Positives = 133/362 (36%), Gaps = 11/362 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI + + +F ++ + +V+ ++++ +S +++ LL++ +P+ Sbjct: 1 MKQLDSYIGKGVVWAFFAVVFILLGLDYVLTFIEQVKRISEF-YTISNLLEVLLLRLPSK 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 P + T L ++ +EL +I G + + +++S+ Sbjct: 60 FAEYIPIASLIGTLVGLGALASTSELTVIRAAGIPIWRIGWSAIKPILIISLIGVGISEF 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + + + + + ++ R ++ YI I + TL + + +S++ Sbjct: 120 IAPNADQRANLIENLKKQQTSDNIISGGVWIRSEEK-YIFIGAADQKGTLYNVKVFNSKN 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 A++ + LN + + + F+S T+ + + Sbjct: 179 QTLQSTQIAKTAQYKTADE-WTLNQVTNTQFLADKIESNNTNFESLTMTFKPEHLYLATQ 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI--VAADKRAL 298 + +LS ++ N + Y EF + + + + LI++ V R+ Sbjct: 238 EPEALSLSQSIS-YQNYLEGQDLNTSRYELEFWTKALRPVASIALVLIALSSVFGPLRSS 296 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + + I + +F + ++ + P+L + + + + ++ K Sbjct: 297 TMGSRIFSGVMIGI-----IFQNGLNLFGRMSLAADFSPLLGVLIPIAICLAIGTLQLKR 351 Query: 359 TK 360 K Sbjct: 352 AK 353 >gi|312884632|ref|ZP_07744335.1| hypothetical protein VIBC2010_15702 [Vibrio caribbenthicus ATCC BAA-2122] gi|309367724|gb|EFP95273.1| hypothetical protein VIBC2010_15702 [Vibrio caribbenthicus ATCC BAA-2122] Length = 356 Score = 111 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 58/358 (16%), Positives = 135/358 (37%), Gaps = 9/358 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +LYI + + + + V ++ +I+ ++++ V T L L IP + Sbjct: 3 KILDLYIGKTLIATTSLVLATFVGLSAIIKYVEQVRKVGEGTYDLIQALFFVILSIPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++ + VL A+ L + + + Sbjct: 63 EMFFPMAALLGALIGLGMLASSSELVVMQAAGFSKLNIGMSVLKTAVPLMVLVTLLGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + L A + ++ R +D +I I+K + + + Sbjct: 123 APQAQKMARDLRTFATSGGALMSVRTGVWARDAND-FIFINKVDDDKIYGLNMWRFNDQK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI-SKDISIMKFKSYTLQTESANSSTIVL 240 Q + +A+ ++ D EV + +K + + + + Sbjct: 182 QLSQTLFAKEVDYVS-ENIWVMKDAEVTDMEGEVKLEKHFLKEYEWKTSLAPDKLAVVTV 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADKRAL 298 K + +L L + + Y F +++TQ L + L++ + R++ Sbjct: 241 KPEELSLGGLYE-YVSYLKSSEQDPSRYELAFWRKVTQPLSIGVMMLMALSFIFGPLRSV 299 Query: 299 VRQRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + + + F+G +++ I P + I+ +F + +IFLL K Sbjct: 300 TMSARILSGVIAGFTFYISSEFFGPLSLVYNIP--PIFGAIMPSCVFLLIAIFLLQRK 355 >gi|163803713|ref|ZP_02197573.1| putative permease [Vibrio sp. AND4] gi|159172496|gb|EDP57361.1| putative permease [Vibrio sp. AND4] Length = 356 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 60/357 (16%), Positives = 134/357 (37%), Gaps = 7/357 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +LYI R I + + V ++ +I+ ++++ V T L L IP + Sbjct: 3 KLLDLYIGRTIISTTALVLATFVGLSGIIKYVEQLRKVGRGTYDLMHALYFVLLSIPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++ + VL A+ L + + Sbjct: 63 EMFFPMAALLGALIGLGMLASSSELVVMQAAGFSKLDIGLSVLKTAVPLMLIVMTLGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + L A A + + ++ R +D +I I K + D Sbjct: 123 APEAQKMARDLRAFALSGGSIVSMRAGVWARDAND-FIFIGKVEDDKLYNLNMWRFDEDK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + K+ +A+ D ++ ++ + ++ + + + +K Sbjct: 182 KLDKVIFAEEVDYQQDNNWLMRYVQVTDMENENAITKRDIEQMEWHTSLAPDKLAVVTVK 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADKRALV 299 + +LS L + + + Y F ++L+Q L + L++ V R++ Sbjct: 242 PEELSLSGLYD-YVSYLKATEQDASRYELAFWRKLSQPLSIAVMMLMALSFVFGPLRSVT 300 Query: 300 RQRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + + S F+G +++ I P + + +F +I LL K Sbjct: 301 MGARILSGVVAGFSFYISSEFFGPLSLVYGIP--PVFGALAPSLVFLAIAIALLRRK 355 >gi|90411865|ref|ZP_01219873.1| putative permease [Photobacterium profundum 3TCK] gi|90327123|gb|EAS43495.1| putative permease [Photobacterium profundum 3TCK] Length = 356 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 65/359 (18%), Positives = 146/359 (40%), Gaps = 11/359 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I + ++ +V ++ +I+ ++++ + T L L IP + Sbjct: 3 KILDWYIGRTIIATTALTLSTLVGLSAIIKYVEQLRKIGDGTYDLWKALIYVLLSIPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++ + VL A+ L + + + Sbjct: 63 EMFFPMAVLLGALIGLGMLASSSELVVMQAAGFSKLDIGLSVLKTAVPLMLIVMVLGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + ++L A ++ ++ + +D +I I + + +TL + I D Sbjct: 123 APQAQKSARELRAIWTSGGNMLSVQSGVWAKDGND-FIYIGRVHEQSTLNAVNIWQFDDE 181 Query: 182 QT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--STI 238 T K+ +A+S S D Q +L D V S I + + KF + +T + + + Sbjct: 182 DTLSKMVFAKSASF-TDEQGWLLADVTVTNISKIQQ--TNTKFDTLPWKTSLSPDKLAIV 238 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADKR 296 +K + LS + + + + Y F ++L Q + + L++ V R Sbjct: 239 TVKPEELALSGVYD-YVSYLKESKQDASRYELAFWRKLLQPISIAVMMLLALSFVFGPLR 297 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 ++ + + + + F + +P + +F + +I+LL K Sbjct: 298 SVTMGARVLSGVIFGFTFYISNEV-FGPMSLVYRLHPAIGALGPSLVFLLITIYLLRRK 355 >gi|21230125|ref|NP_636042.1| hypothetical protein XCC0650 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769884|ref|YP_244646.1| hypothetical protein XC_3584 [Xanthomonas campestris pv. campestris str. 8004] gi|21111655|gb|AAM39966.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575216|gb|AAY50626.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] Length = 360 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 53/358 (14%), Positives = 127/358 (35%), Gaps = 19/358 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L +SFL + + ++ ++ ++ + ++ +LL G Sbjct: 1 MPKLDRYLLSDFTQSFLATLIVLLVVSVGGVLVDILGNIADGRIPARLLLSQVGLQFVAY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP++ P + L + R++E+ +I G +++P+L+L + + + + Sbjct: 61 LPIILPLALMLGLLLALARLYRDSEMAVITAIGIGPRRMLRPILWLVVPVVVVIGACSLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSR 179 + P T + + A ++ + LE F L + ++ +P+ L +F+ + Sbjct: 121 LGPWASRTAELMLEDANRSVVMAGLESGKFTPLSGGGVVYLTTISPDGKGLGKVFMQRQK 180 Query: 180 DTQTHKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISK--DISIMKFKSYTLQTESAN 234 D + + A+ G++ + + L DG ++ D +M F S + Sbjct: 181 DDRID-VVTAERGAMFFEGKTDRYLRLEDGHRIEGPAGAQGLDYRLMTFASNDVALPDRT 239 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + + L+ + R+E H+RL L + Sbjct: 240 KAHDANDPEVMSTFKLI----------GDARPIARAELHRRLAPPLL--ALAFALLTLPL 287 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 R+ RQ++ + L+ G L+ + ++ + Sbjct: 288 SRSAPRQQRYGRIMLAFLAYLVGTNLMIVGTQWIANGKVPGALGLWWLTLPLLAVSIW 345 >gi|255038424|ref|YP_003089045.1| permease YjgP/YjgQ family protein [Dyadobacter fermentans DSM 18053] gi|254951180|gb|ACT95880.1| permease YjgP/YjgQ family protein [Dyadobacter fermentans DSM 18053] Length = 360 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 63/359 (17%), Positives = 134/359 (37%), Gaps = 11/359 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPTV 60 K + Y+++ +++ IV I +I ++++ L I++ LIP Sbjct: 4 KILDRYLIKNFLITYVFVAFVIVLIICMIDYTEKVDDFLDKKAPLREIIIDYYLNLIPYW 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++P + T + + TE++ + ++G S +++P + A++L I FI Sbjct: 64 INYISPLMVFIATVFFTSRIAARTEIIAMLSSGISFGRMLRPYMAGAVVLGILTFIQVGW 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF-IVDSR 179 + PK I+ K + F + N+ + D+Y + YN F + + Sbjct: 124 VLPKAN-KIRNSFEKTYVKNEFYFSGHNVHITIAPDVYAYLESYNTTTQTGNKFTMETIK 182 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 T+ + +YA + L + +V + + +S T+ + + Sbjct: 183 GTKLLQKFYADKIVWQPKKGKWTLQNYQVRTLDSLGERLSRGTEIDTTINLSPKDFESDY 242 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L L + + LE Y E + R TQ +I I ++ Sbjct: 243 NLFETFTLPELNAYIDLLKSRGADGLEVYLIEKYTRFTQPFAILILTAIGVIV-----SA 297 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL---YLFLFCISSIFLLMIK 355 R+ ++ I+L + +++ K I L +L S+I +L+ K Sbjct: 298 RKSRRGVGWQIALGFMLAFIYILFFLLSKGVAEAGTINTLFAVWLPNIVFSAIGVLLYK 356 >gi|88859093|ref|ZP_01133734.1| hypothetical protein PTD2_08814 [Pseudoalteromonas tunicata D2] gi|88819319|gb|EAR29133.1| hypothetical protein PTD2_08814 [Pseudoalteromonas tunicata D2] Length = 354 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 60/360 (16%), Positives = 140/360 (38%), Gaps = 10/360 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y+ R I ++ + L +V I+ +I+ ++++ V + + + + IP Sbjct: 1 MKILDWYLGRSILQTTGFALLVLVGISTLIKFIEQLKYVGRGSYDVMTAGLYTLFSIPAD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ N+EL+++ G SR +I+ V+ A+++++ + Sbjct: 61 VVTFFPMATLIGGLTGLGALASNSELVVMQAAGLSRFEIIRSVMKTALVMALCVMAMGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SR 179 P+ + K+L A + + ++ + D D+++ I + N L G+ + ++ Sbjct: 121 GVPEAQKQAKELRTYAISGGSIFNARQGVWAK-DGDVFLNIDNVDDNGQLNGLKMYQFNK 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 I AQS R +L + K + Y + + Sbjct: 180 SLDLVAITNAQSA--ISHRDGWLLKGVKTIYLDEQEVRQENTKEQLYVSELTPDKLGIVS 237 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADKRA 297 LKA + + L+ + + +Y ++L Q + + L++ + R+ Sbjct: 238 LKAESLSFTGLIG-YLDYLKKNEQDTSSYELALWRKLMQPVSIAVMLLVALSFIFGPLRS 296 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + + + + F I+ E +P + LF I + +IKK+ Sbjct: 297 VSMGARIVMGVITGIVFHLSDKI-FGPIVLVYELSPVVGAVFPSLLF--IGISIYLIKKR 353 >gi|260494012|ref|ZP_05814143.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33] gi|260198158|gb|EEW95674.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33] Length = 363 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 57/363 (15%), Positives = 130/363 (35%), Gaps = 11/363 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K ++Y+ + + FLM+ + + + + Q + I ++ +L L+P + Sbjct: 2 IKKMDIYVSKYFIKFFLMNIIGFMGVFLLAQTFKIIKYINQGKLVGGEILDYILNLLPKM 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 P + ++ M N E++ + +G + +++ L +A ++S+ +F N Sbjct: 62 FVETAPLSVLLAGLITISIMASNLEIVSLKTSGIRFLRIVRAPLIIAFVISLIVFFINNS 121 Query: 121 IEPKCRSTIK-QLSAKAQLALTFSYLEENL-FFRLDDDLYIKISKYN-PNNTLQGIFI-- 175 I K + I + +L +EN F D + + N + I + Sbjct: 122 IYTKSLAKINFYRRGEVDESLKLPTTKENAFFINNTDGYLYLMGEINRETGVAENIEVVK 181 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 D+ ++ +I A+S D + I ++ ++ + I+ ++KS + + +N Sbjct: 182 FDTEISKPKEIITAKSAKFDTEENKWIFSNVNIYNVD-TKETITKTEYKSKLYKDDPSNF 240 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + L E Y SE KR + I I + Sbjct: 241 IRASAEDPRMLTIKELKKTIKEQKSIGEDTRIYLSELAKRYSFPFASFIVAFIGLSV--S 298 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLM 353 VR + + I + +G + S + N P + ++ I + Sbjct: 299 SKYVRGGRTTMNLVICVIAGYGYYLV-SGAFEAMSLNGILNPFIASWIPNILYLIIGIYF 357 Query: 354 IKK 356 + + Sbjct: 358 MNR 360 >gi|219871562|ref|YP_002475937.1| permease [Haemophilus parasuis SH0165] gi|219691766|gb|ACL32989.1| permease, inner membrane protein yjgQ [Haemophilus parasuis SH0165] Length = 355 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 56/360 (15%), Positives = 124/360 (34%), Gaps = 9/360 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E YI R I S +++ +V + +I+ ++ V + + +P Sbjct: 1 MNVLERYIGRTILASIMLTLFMLVGLGAIIKFVEEFRSVGRGSYDGLHAAYYTLLTMPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + L + +EL+++ + G SR + V+ AI L + I Sbjct: 61 IETFFPIAALLGSLMGLGGLASRSELVVMQSAGFSRFRIGLAVMKTAIPLMVITMIMGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + + + + + F+ D + +I I + L I I + Sbjct: 121 GVPQTEQYARNMRS-IAQSGGSMLATQGGFWAKDGNDFIYIRQIQDERNLNNILIYQFEN 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 I A+ + Q +L + + +++ + + L Sbjct: 180 QVLKSIKQAEKATY--SEQGWLLQQVDKSEIHESGITQTRETDQAWKTSITPSKLGIVSL 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K ++S L + + + + F +++ Q + + L++I +R Sbjct: 238 KPESLSISGLAD-YVGFLKDTGQDSKRFEITFWRKVFQPISMAVMMLLAISFIFGP--LR 294 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHK---IEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I I + F + + + P I L L C+S ++ L+ KK+ Sbjct: 295 SSTMGAKIVIGILAGFVFYVANIVFGNLSLIVSWLPVPIGALIPSLLCLSVVWWLLNKKR 354 >gi|24372948|ref|NP_716990.1| hypothetical protein SO_1370 [Shewanella oneidensis MR-1] gi|24347091|gb|AAN54435.1|AE015581_2 conserved hypothetical protein [Shewanella oneidensis MR-1] Length = 352 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 56/364 (15%), Positives = 133/364 (36%), Gaps = 21/364 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK +LYI R + + + L + ++ +I+ + ++ LV T ++ +L+P Sbjct: 1 MKILDLYIARVLLSTSALCLLVLTGLSGIIKWVDQLRLVGRGTYTMMDAGIYVLFLVPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + + N+EL+++ +G SR+ + + A+ L + + Sbjct: 61 IEMFFPMAVLLGALIGMGMLASNSELVVMQASGMSRLQITLSAMKTAVPLMLMVMALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SR 179 P +L A +L+ + D DL++ I + + L I + + Sbjct: 121 GAPIAEQKANELQA-IKLSGGSLIKSHRGIWAKDGDLFVNIGEVADIDKLNNITLYKFNS 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + + +A+S D + +L D + S + + + S + Sbjct: 180 ELKLTNVVHAESALFSKD--SWLLTDVKRTDLSYDEVKLEHLDEDVWRSSLTPDKLSVVS 237 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 +K ++ L+ N + Y +++ Q + + L+++ Sbjct: 238 VKPEALSIRGLMG-YLEYLNSNSQDPSRYELALWRKVMQPVTVGVMMLVALSFVFGP--- 293 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHK--------IEQNPYYIPILYLFLFCISSIFL 351 + + + + GV GFS+ I + + P Y+ + L F Sbjct: 294 -----LRTVTMGARVLLGVVAGFSFYISNEIFGPMSIVYELPAYVGAMAPSLLFTGVAFY 348 Query: 352 LMIK 355 + + Sbjct: 349 FIRR 352 >gi|330890526|gb|EGH23187.1| hypothetical protein PSYMO_17673 [Pseudomonas syringae pv. mori str. 301020] Length = 231 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 81/224 (36%), Gaps = 11/224 (4%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ R + + ++ + ++ + +S +L I G+ +P L ++ Sbjct: 5 RYLSREVLLTLSAVSAVLLVFIMSGRFIKYLAQAASGALDPGVLFLIMGFRLPGFLQVIL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + + +E+ ++ TG S+ L+ + A L+ + + + P+ Sbjct: 65 PLGLFLGILMAYGRLYLESEMTVLAATGMSQQRLLAITMGPATLVGLLVAWLSFSLAPQG 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYNPNNT-LQGIFIV------D 177 + L K F L F L D I + + + + L G+FI D Sbjct: 125 ATQFSLLINKQDAMTEFDTLVPGRFQALRDGTRITYTKELSEDRSQLAGVFISEKRMSGD 184 Query: 178 SRDTQTHKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDI 218 + A+ G ++ +IL +G + +P + D Sbjct: 185 KSKDNGITVLVAEKGHQEVRPNGSRFLILENGYRYDGNPGAADY 228 >gi|197119770|ref|YP_002140197.1| membrane protein [Geobacter bemidjiensis Bem] gi|197089130|gb|ACH40401.1| membrane protein, YjgQ-related protein [Geobacter bemidjiensis Bem] Length = 360 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 58/368 (15%), Positives = 142/368 (38%), Gaps = 19/368 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI R + + + I V+ +++++ + S L IP + Sbjct: 1 MNILTRYIARAYVKMLSLCLGSFIAIYLVVDFMEKVSRFTRYGASWKHLALFFITKIPEM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P M T L +++ +EL I + G S + P+L +++L+S+ + Sbjct: 61 IIDAAPLAVLMATLLTLGTLSLTSELTAIRSCGVSLFRISLPILVISVLMSLGVLAIGEF 120 Query: 121 IEPKCRSTIKQLSAKA---QLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIV 176 + PK + + + + + + + ++N++FR ++ ++ S + P N L+GI + Sbjct: 121 VLPKTYAQ-RTYIQEVLIQKKSPSAFFRQQNIWFR-EEGTVLRASLFEPARNELKGITLW 178 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSY--TLQTESAN 234 + + + ++ L + + D V R+ + S K++ LQ + A+ Sbjct: 179 ELQPGTGEPLKRTEADLAILGAKGWMFRDAVV-RQFRDGEVSSTQKYRELPVELQLKPAD 237 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 T+ ++ +L L Y ++ H R++ + + I A Sbjct: 238 LKTLGKFSDSMSLVELSRYCRK-LRASGYDPTRYVTQMHSRISMPFGCAVMAFLGIPFAL 296 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSY-IIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + I+ + + GF Y I++ + + + +L + ++ F+ Sbjct: 297 RGG--------RSSGIAFGVGLSIGVGFLYVIVNSVIISVGQVGLLPPVVAAWATNFIFF 348 Query: 354 IKKKYTKI 361 + + + Sbjct: 349 VAGAWLSL 356 >gi|226355960|ref|YP_002785700.1| permease YjgP/YjgQ [Deinococcus deserti VCD115] gi|226317950|gb|ACO45946.1| putative permease YjgP/YjgQ; putative membrane protein [Deinococcus deserti VCD115] Length = 381 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 57/387 (14%), Positives = 124/387 (32%), Gaps = 38/387 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+ + L L + ++ L ++ + Y +P Sbjct: 1 MTRLTRYVTAELIPPLLAGTLLFTAVLSFGYFFISSQWLA--GVPLGLVSRWIAYQVPDT 58 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V P + T M+ EL+ + + G + +PV +A L++ Sbjct: 59 LVKVFPMAIVLMTVVAFGRMSTERELVAVQSGGIGLGRVARPVALVAGLVTALALWLSLW 118 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYNPNNTLQGIFIV--D 177 I PK + L A S L L L + S + L+G+ + + Sbjct: 119 IAPKANVETRGLYWDALTGAGLSQLV-GKTVDLGGGLTLALASYDSATRELRGVRVEKWN 177 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAII-------------------LNDGEVHRKSPISKDI 218 + + + +A G+ + ++ A+ ND R++ + Sbjct: 178 ADAPRRATLIFADKGTFENNQLALSGYQVYTVDYEAASELNRVPENDPLAFREAVQNVFP 237 Query: 219 SIM----KFKSYTLQTESANSSTIVLKAN----DQNLSFLLNPNPNNPNYRPELLETYRS 270 S++ + + T + T+ A+ D L P + + R Sbjct: 238 SVVIPEKTTDTLKVDTGLSRKQTLAQYADAIGADSEGWPELITALTAPGVKASERQAARV 297 Query: 271 EFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIE 330 +++L ++ L ++ A + R + I+L I+ + F + Sbjct: 298 NLNRKLALPFANLVLALSALPFALRFG----RTLGVSLGIALLIAVAYYLLFFVGLTVAS 353 Query: 331 QNPYYIPI-LYLFLFCISSIFLLMIKK 356 P + ++L + L M+++ Sbjct: 354 AMPAVPEVGVWLANIVFAVAGLWMLRR 380 >gi|322514885|ref|ZP_08067902.1| YjgP/YjgQ family membrane protein [Actinobacillus ureae ATCC 25976] gi|322119139|gb|EFX91289.1| YjgP/YjgQ family membrane protein [Actinobacillus ureae ATCC 25976] Length = 360 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 57/366 (15%), Positives = 128/366 (34%), Gaps = 21/366 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E YI + I L + ++I++ + V + S ++P+ Sbjct: 6 MNILERYIGKTIITMIFAVLLMSSGLVFIIKLAEEFKDVGKGSYDALTATYYSLLMLPSD 65 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ +EL+++ ++G SR + V+ AI L +F + Sbjct: 66 IKEFIPVVALIGGLLGLGNLASRSELVVMQSSGFSRFRIGLAVMKTAIPLIVFTMLVSEW 125 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + + + + + + F+ D + +I I L + I D Sbjct: 126 GIPQTEQYARNMRS-IAQSGSSMLSTKGGFWAKDGNDFIYIRHIENERKLNNLSIYHFED 184 Query: 181 TQTHKIYYAQSGSIDLDRQAII------LNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + AQ+ + + + D + + ++KD + Sbjct: 185 KSLKSVTQAQNAIFNGKNWTLQNVQTSSIADNSIQQAKEVNKDWQTT--------ITPSK 236 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + LK ++S L + + + ++ F +++ Q + + L++I Sbjct: 237 LGIVSLKPESLSISGLSD-YVGFLKETGQNSKRFQIAFWRKVYQPISMAVMMLLAISFVF 295 Query: 295 KRALVRQRKKIHPIFISLSISFGVFW---GFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 +R +FI + F + F + P I L L C+S ++ Sbjct: 296 GP--LRSSAMGTKLFIGIIAGFVFYVSNIVFGNMTLVFSWIPVAIGALIPSLICLSIVWW 353 Query: 352 LMIKKK 357 L+ KK+ Sbjct: 354 LLTKKR 359 >gi|258405420|ref|YP_003198162.1| permease YjgP/YjgQ family protein [Desulfohalobium retbaense DSM 5692] gi|257797647|gb|ACV68584.1| permease YjgP/YjgQ family protein [Desulfohalobium retbaense DSM 5692] Length = 395 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 55/370 (14%), Positives = 115/370 (31%), Gaps = 15/370 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + I + + F + + + V ++L+ L S +L L ++ YL P L Sbjct: 4 RRLSREIFKELVYVFSLCLGSFLALLLVGRLLKLRELFLSQDVALLDLGQLFLYLSPFFL 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 ++ P + M+ + EL+ + G S L+ L +L + Sbjct: 64 LLLLPIASMLSVFLTFLRMSTDRELVALRAAGLSLWQLLPVTLLFLLLCTAANIGIGIYG 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSRD 180 + T L+ +F + L I + + L +F+ D+ Sbjct: 124 VSWGMDNFRATILDMAKTRTQLVLQPGVFNQDFPGLTIFARQVDRETGDLSTVFVEDTSR 183 Query: 181 TQTHKIYYAQSGSIDLD----RQAIILNDGEVHRKSPISKDISIMKFKSY----TLQTES 232 Q A GS+ D + L +G ++R S S++ F Y L Sbjct: 184 GQGAIGIVAPQGSLTTDTRKGQVVFSLRNGRLYRHDRDSA--SVLGFGEYRIALDLDKII 241 Query: 233 ANSSTIVLKANDQNLSFLL---NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 + + + + + L+ + E HKRL L + G+ + Sbjct: 242 SGVELEEKRPKEMSWTRLMDYRHQADLAQTRDATFDRKVDVETHKRLALPLACLALGIFA 301 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY-LFLFCISS 348 + A +++ + + +F + P + + Sbjct: 302 MPLAALFEGLKRHFGFLVSLGLFLVYYALFSAGLSLGETGTLAPAIGLWAPNILFMGLGG 361 Query: 349 IFLLMIKKKY 358 I M ++ Sbjct: 362 ILFHMAARER 371 >gi|170077642|ref|YP_001734280.1| YjgP/YjgQ permease superfamily [Synechococcus sp. PCC 7002] gi|169885311|gb|ACA99024.1| putative permease, YjgP/YjgQ family superfamily [Synechococcus sp. PCC 7002] Length = 378 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 51/368 (13%), Positives = 131/368 (35%), Gaps = 15/368 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + YI+ + FL + + + + + V ++ + I +I +P Sbjct: 9 SLLDRYIMAQLVGPFLFGLGIFTSLGLTIGVLFEVMRNVVANEITWAIAFQILALRLPEF 68 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + T +S++ +E++ + + G + L+ P L L +L++ F + Sbjct: 69 LVLGLPMATLLGTLTAYSSLSSFSEIIALRSVGLPPLRLMLPGLLLGLLITGITFGLNDW 128 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-----------YIKISKYNPNNT 169 I P+ ++ AQ T Y E+N+ + + + ++ Sbjct: 129 IVPQTTKQASTIANIAQGEATIDYQEKNIIYPEYQRVKTATGNREILKTLFYAETFDGTQ 188 Query: 170 LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ 229 + + I+D T +I A + + + Q ++ DG +++ I +F++ L Sbjct: 189 MNNLTILDRAAVDTQRIITAAAAQWNANEQGWLVQDGSIYQIGANGSFSDIEQFETNFLN 248 Query: 230 TESANS--STIVLKANDQNLSFLLNPNPNNPNYRPEL-LETYRSEFHKRLTQWLFPVIFG 286 A +T + N+ L + + R E + T + ++ + ++F Sbjct: 249 LSDAPLILATRCQRPNEMTLQVIDVCLESLKLSRNERRIRTLQVRKQEKFSVPFVCIVFA 308 Query: 287 LISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCI 346 ++ + + + + + + S + P+ L + Sbjct: 309 MVGSAIGLRPQNSSRATSVGLSVAIVFAYYLISVISSSMGVWGTITPFMGTWFPNLLGLV 368 Query: 347 SSIFLLMI 354 ++ +L Sbjct: 369 AAGTILWR 376 >gi|156975867|ref|YP_001446774.1| hypothetical protein VIBHAR_03633 [Vibrio harveyi ATCC BAA-1116] gi|156527461|gb|ABU72547.1| hypothetical protein VIBHAR_03633 [Vibrio harveyi ATCC BAA-1116] Length = 356 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 58/357 (16%), Positives = 132/357 (36%), Gaps = 7/357 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +LYI R I + + V ++ +I+ ++++ V L L IP + Sbjct: 3 KLLDLYIGRTIISTTALVLATFVGLSGIIKYVEQLRKVGRGAYDLMHALYFVLLSIPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++ + VL A+ L + + Sbjct: 63 EMFFPMAALLGALIGLGMLASSSELVVMQAAGFSKLDIGLSVLKTAVPLMLIVMTLGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + L A A + + ++ R +D +I I K + D Sbjct: 123 APEAQKMARDLRAFALSGGSIVSVRAGVWARDAND-FIFIGKVEDDKLYGLNMWRFDEDK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + K+ +A+ D ++ ++ ++ + + + +K Sbjct: 182 KLDKVIFAEEVDYQQDNNWLMRYVQVTDMENENVITKRDVEQMEWHTSLAPDKLAVVTVK 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADKRALV 299 + +LS L + + + Y F ++L+Q L + L++ V R++ Sbjct: 242 PEELSLSGLYD-YVSYLKATEQDASRYELAFWRKLSQPLSIAVMMLMALSFVFGPLRSVT 300 Query: 300 RQRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + + + F+G +++ I P + + +F +I LL K Sbjct: 301 MGSRVLSGVVAGFTFYISSEFFGPLTLVYGIP--PVFGALAPSLVFLAIAISLLRRK 355 >gi|16125010|ref|NP_419574.1| hypothetical protein CC_0757 [Caulobacter crescentus CB15] gi|221233731|ref|YP_002516167.1| hypothetical protein CCNA_00794 [Caulobacter crescentus NA1000] gi|13421992|gb|AAK22742.1| conserved hypothetical protein [Caulobacter crescentus CB15] gi|220962903|gb|ACL94259.1| conserved membrane spanning protein [Caulobacter crescentus NA1000] Length = 397 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 97/255 (38%), Gaps = 6/255 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + Y+LR + + + ++++ +L+S +TE L L ++ L P + Sbjct: 5 NTLDRYLLRRTLAPMSAVLISTMVAFLMERLMRSFDLLSQTTEGLRYLAELLVNLTPHYV 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P F + V+ +N+++E+ I +GTS P + + +LL + I + Sbjct: 65 GLTLPGGFFIGLFVVVNGLNKSSEIDAILASGTSLTRFTAPFVAMGVLLMVLSVILFGFV 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSRD 180 +P R + A+ A + D ++ + + + LQ +FI Sbjct: 125 QPYSRYAYHAVLHAAENAGWNGDVRPKALLSAGSDFFLTADRTDASGRYLQQVFIRRIDP 184 Query: 181 TQTHKIYYAQSGSIDLDRQ----AIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 I A S + + A+ L +G + ++ F S ++ Sbjct: 185 NGREDILTAVSAVVHKNPADSHIALELTNG-RQISTVAGAQSYVVNFSRLMFDVPSGDAG 243 Query: 237 TIVLKANDQNLSFLL 251 + L+ D + L+ Sbjct: 244 LLRLRGEDVSELTLI 258 >gi|19704365|ref|NP_603927.1| hypothetical protein FN1030 [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19714617|gb|AAL95226.1| Hypothetical membrane-spanning protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 363 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 54/366 (14%), Positives = 125/366 (34%), Gaps = 17/366 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K ++YI + + FLM+ + + + + Q + I ++ + + L+P + Sbjct: 2 IKKMDIYISKYFIKFFLMNIIGFMGVFLLAQTFKIIKYINQGKLAGGEIFDYILNLLPKM 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 P + ++ M N E++ + +G + +++ L +A ++S+F+F N Sbjct: 62 FVETAPLSVLLAGLITISIMASNLEIVSLKTSGIRFLRIVRAPLIIAFVISLFVFFVNNS 121 Query: 121 IEPKCRSTIK-QLSAKAQLALTFSYLEENL-FFRLDDDLYIKISKYNPNNTLQ---GIFI 175 I K + I + L +EN F + + K N L + Sbjct: 122 IYTKSLAKINFYRRGEIDETLKLPTTKENAFFINNTEGYLYLMGKINRETGLAENIEVVK 181 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 ++ ++ +I A+S D + I ++ ++ I Y + Sbjct: 182 FNTEISKPKEIITAKSAKFDTEENKWIFSNVNIYNVETKETTAKI----EYKSNLYKDDP 237 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYR---PELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 S + + + + + E Y +E KR + I I + Sbjct: 238 SNFIKASAEDPRMLTIKELKKTIKEQKNIGEDTRIYLAELAKRYSFPFASFIVAFIGLSV 297 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIF 350 VR + + I + +G + S + N P + ++ I Sbjct: 298 --SSKYVRGGRTTMNLVICVVAGYGYYLV-SGAFEAMSLNGILNPFIASWVPNILYLIIG 354 Query: 351 LLMIKK 356 + + + Sbjct: 355 IYFMNR 360 >gi|54113843|gb|AAV29555.1| NT02FT0414 [synthetic construct] Length = 360 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 63/357 (17%), Positives = 126/357 (35%), Gaps = 10/357 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 E Y I +F LFI+ I +++ S ++ ++K IP + Sbjct: 2 ILEKYYNIDIVNTFTSITLFIISIVSANLLIRLFQEAYSQGLGIDSIVKFVILTIPENVS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + N E+ + G + + ++K L + L+I I+ + Sbjct: 62 LVAPIAIFLAIVICFGKYFANNEMFVTIAGGITWMQIVKNTLKPVVALTIITLITVMYLN 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR-DT 181 P + T+ A S + + + D I I + NTL +F+ + Sbjct: 122 PLSKQTLDIYRASLSAKALLSSITDQKIIKAPDGKIIYIGNKS-GNTLSDVFLYQNTPQD 180 Query: 182 QTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +K+ A + I D+ A I + ++ K+ + + S K + Sbjct: 181 GEYKVMTAPTAKIVSDKTAAYIDFMNVNIYTKNSQNSEYSYDNAKKAIYTIFDNSDRDYN 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 D+ L N N+ N Y++EF R+ + ++ L+++ R Sbjct: 241 HDRVDRLYMHTLIENFNDKN----NGTAYKAEFLGRINNAISVIVSSLLALALCRLRPRQ 296 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + K+ P + L+I F + P +I +L + + I+K Sbjct: 297 NKYAKLLPSVVVLAIYLCTNM-FINTLMANSSVPVWIGF-WLPHIFFTIFAVRTIRK 351 >gi|254229297|ref|ZP_04922715.1| putative permease, YjgP/YjgQ family [Vibrio sp. Ex25] gi|262393203|ref|YP_003285057.1| hypothetical protein VEA_002430 [Vibrio sp. Ex25] gi|151938221|gb|EDN57061.1| putative permease, YjgP/YjgQ family [Vibrio sp. Ex25] gi|262336797|gb|ACY50592.1| putative membrane protein [Vibrio sp. Ex25] Length = 356 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 61/361 (16%), Positives = 137/361 (37%), Gaps = 15/361 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +LYI R I + + V ++ +I+ ++++ V L L +P + Sbjct: 3 KILDLYIGRTIISTTALVLATFVGLSGIIKYVEQLRKVGRGVYDLTHALYFVLLSVPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++ + VL A+ L + + Sbjct: 63 EMFFPMAALLGALIGLGMLASSSELVVMQAAGFSKLDIGLSVLKTAVPLMLIVMTLGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + L + A + + ++ R +D +I I K + D Sbjct: 123 APEAQKMARDLRSFAISGGSIVSVRSGVWARDAND-FIFIGKVEDDKLYALNMWRFDDDK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPIS----KDISIMKFKSYTLQTESANSST 237 K+ +A+ D ++ D ++ + +DI M++ + + Sbjct: 182 NLQKVIFAEEVDYQQDNN-WLMRDVQITDMKNENVISKQDIEQMEWHT---SLAPDKLAV 237 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADK 295 + +K + +LS L + + Y F ++LTQ L + L++ V Sbjct: 238 VTVKPEELSLSGLYD-YVTYLKASEQDASRYELAFWRKLTQPLSIAVMMLMALSFVFGPL 296 Query: 296 RALVRQRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R++ + + + + F+G +++ I +P + + +F +I LL Sbjct: 297 RSVTMGARVLSGVVAGFTFYISSEFFGPLSLVYGI--SPVFGALAPSLVFLAIAIALLRR 354 Query: 355 K 355 K Sbjct: 355 K 355 >gi|240014488|ref|ZP_04721401.1| hypothetical protein NgonD_07558 [Neisseria gonorrhoeae DGI18] gi|240121010|ref|ZP_04733972.1| hypothetical protein NgonPI_04426 [Neisseria gonorrhoeae PID24-1] Length = 356 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 52/372 (13%), Positives = 122/372 (32%), Gaps = 28/372 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +IL + + + +L + +P Sbjct: 1 MNLISRYIIRQMAVMAVCALLAFLALYSFFEILYETGNLGKGSYGIWEMLGYTALKMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + +EL +I +G S L+ + + +I Sbjct: 61 AYELMPLAVLIGGLASLSQLAAGSELAVIKASGMSTKKLLLILSQFGFIFAIAAVALGEW 120 Query: 121 IEPKCRSTIKQLSA-----KAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI 175 + P + + A K T +L+E + I + P++TL GI I Sbjct: 121 VAPTLSQKAENIKAAAINGKISTDHTGLWLKEK-------NSIINVRGMLPDHTLLGIKI 173 Query: 176 VDSRDTQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 D + A S ++ D L + + S +++ + Sbjct: 174 WARNDKNELAEAVEADSAVLNSDGS-WQLKNIRRSIMGTDKIETSAAAEETWPIAVRRNL 232 Query: 235 SSTIVLKANDQNLSFL---LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 +++K + ++ L + NN + + Y + ++L + + L++ Sbjct: 233 MDVLLVKPDQMSVGELTTYIRHLQNNS----QNTQIYAIAWWRKLVYPVAAWVMALVAFA 288 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISS 348 R +F + + F + P+ L F + + Sbjct: 289 F--TPQTTRHGNMGLKLFGGICLGLLFHLAGRLFGFTSQLYGTPPFLAGALPTIAFALLA 346 Query: 349 IFLLMIKKKYTK 360 + +I+K+ + Sbjct: 347 V--WLIRKQEKR 356 >gi|157374155|ref|YP_001472755.1| permease YjgP/YjgQ family protein [Shewanella sediminis HAW-EB3] gi|157316529|gb|ABV35627.1| permease YjgP/YjgQ family protein [Shewanella sediminis HAW-EB3] Length = 352 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 57/349 (16%), Positives = 129/349 (36%), Gaps = 15/349 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +LYI R I S + L + ++ +I+ + ++ LV + ++ +LIP Sbjct: 1 MRILDLYIARTIVSSSALCLLILTGLSGIIKWVDQLRLVGRGSYTMLDAGIYVLFLIPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M P + + + N+EL+++ ++G SR + + AI L + + Sbjct: 61 LEMFFPLGVLLGALIGMGMLASNSELVVMQSSGLSRWQITLSAMKTAIPLMLLIMALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P +L A + ++ + D DL++ I + N L I + + + Sbjct: 121 GAPVAEQKANELQATKLSGGSLIKSSRGIWAK-DGDLFVNIGEVEDINHLGNITLYEFDE 179 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 T + +A+ G D ++ D + ++ + + S + Sbjct: 180 TLSLVRTIHAEHGVYSNDHWRLM--DVRQTDLTEDKVTLTDLTLYRWESTLTPDKLSVVS 237 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 +K ++ L+ + + Y ++L Q + + L+++ Sbjct: 238 VKPESLSIQGLMG-YLDYLKVNNQDSARYELALWRKLLQPVTVGVMMLVALSFVFGP--- 293 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 + + + + GV GFS+ I P + ++Y I + Sbjct: 294 -----LRTVTMGARVLLGVIAGFSFYISSEIFGP--LTLVYGVPAFIGA 335 >gi|304410147|ref|ZP_07391766.1| permease YjgP/YjgQ family protein [Shewanella baltica OS183] gi|307302142|ref|ZP_07581900.1| permease YjgP/YjgQ family protein [Shewanella baltica BA175] gi|304351556|gb|EFM15955.1| permease YjgP/YjgQ family protein [Shewanella baltica OS183] gi|306914180|gb|EFN44601.1| permease YjgP/YjgQ family protein [Shewanella baltica BA175] Length = 352 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 56/364 (15%), Positives = 132/364 (36%), Gaps = 21/364 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK +LYI R + + + L + ++ +I+ + ++ LV T S+ +L+P Sbjct: 1 MKILDLYIARVLLSTSALCLLVLTGLSGIIKWVDQLRLVGRGTYSMMDAGIYVLFLVPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + + N+EL+++ +G SR+ + + A+ L + + + Sbjct: 61 IEMFFPMAVLLGALIGMGMLASNSELVVMQASGMSRLQITMSAMKTAVPLMLLVMVLGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SR 179 P +L A +L+ + D DL++ I + + L I + + Sbjct: 121 GAPIAEQKANELQA-IKLSGGSLIKSHRGIWAKDGDLFVNIGEVENISKLNNITLYKFNS 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + + +A DR L D + S + ++ + S + Sbjct: 180 ELKLTNVVHADRAVFSQDR--WRLFDVKRTDLSYEKVVLEYLEEDQWQSSLTPDKLSVVS 237 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 +K ++ L+ + + Y +++ Q + + L+++ Sbjct: 238 IKPEALSIRGLVG-YLDYLKTNSQDPSRYELALWRKVMQPVTVAVMMLVALSFVFGP--- 293 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHK--------IEQNPYYIPILYLFLFCISSIFL 351 + + + + GV GFS+ I + + P Y+ + L F Sbjct: 294 -----LRTVTMGARVLLGVVAGFSFYISNEIFGPMSIVYELPAYVGAVAPSLLFTGVAFY 348 Query: 352 LMIK 355 + + Sbjct: 349 FIRR 352 >gi|160876366|ref|YP_001555682.1| permease YjgP/YjgQ family protein [Shewanella baltica OS195] gi|160861888|gb|ABX50422.1| permease YjgP/YjgQ family protein [Shewanella baltica OS195] gi|315268556|gb|ADT95409.1| permease YjgP/YjgQ family protein [Shewanella baltica OS678] Length = 352 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 57/364 (15%), Positives = 132/364 (36%), Gaps = 21/364 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK +LYI R + + + L + ++ +I+ + ++ LV T S+ +L+P Sbjct: 1 MKILDLYIARVLLSTSALCLLVLTGLSGIIKWVDQLRLVGRGTYSMMDAGIYVLFLVPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + + N+EL+++ +G SR+ + + A+ L + + + Sbjct: 61 IEMFFPMAVLLGALIGMGMLASNSELVVMQASGMSRLQITMSAMKTAVPLMLLVMVLGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SR 179 P +L A +L+ + D DL++ I + N L I + + Sbjct: 121 GAPIAEQKANELQA-IKLSGGSLIKSHRGIWAKDGDLFVNIGEVENINKLNNITLYKFNS 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + + +A DR L D + S + ++ + S + Sbjct: 180 ELKLTNVVHADRAVFSQDR--WRLFDVKSTDLSYEKVVLEYLEEDQWQSSLTPDKLSVVS 237 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 +K ++ L+ + + Y +++ Q + + L+++ Sbjct: 238 IKPEALSIRGLVG-YLDYLKTNSQDPSRYELALWRKVMQPVTVAVMMLVALSFVFGP--- 293 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHK--------IEQNPYYIPILYLFLFCISSIFL 351 + + + + GV GFS+ I + + P Y+ + L F Sbjct: 294 -----LRTVTMGARVLLGVVAGFSFYISNEIFGPMSIVYELPAYVGAVAPSLLFTGVAFY 348 Query: 352 LMIK 355 + + Sbjct: 349 FIRR 352 >gi|296327425|ref|ZP_06869972.1| YjgP/YjgQ family permease [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296155438|gb|EFG96208.1| YjgP/YjgQ family permease [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 363 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 53/366 (14%), Positives = 124/366 (33%), Gaps = 17/366 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K ++YI + + FLM+ + + + + Q + I ++ + + L+P + Sbjct: 2 IKKMDIYISKYFIKFFLMNIIGFMGVFLLAQTFKIIKYINQGKLAGGEIFDYILNLLPKM 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 P + ++ M N E++ + +G + +++ L +A ++S+F+F N Sbjct: 62 FVETAPLSVLLAGLITISIMASNLEIVSLKTSGIRFLRIVRAPLIIAFVISLFVFFVNNS 121 Query: 121 IEPKCRSTIK-QLSAKAQLALTFSYLEENL-FFRLDDDLYIKISKYNPNNTLQ---GIFI 175 I K + I + L +EN F + + K N L + Sbjct: 122 IYTKSLAKINFYRRGEIDETLKLPTTKENAFFINNTEGYLYLMGKINRETGLAENIEVVK 181 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 ++ ++ +I A+S D + I ++ ++ Y + Sbjct: 182 FNTEISKPKEIITAKSAKFDTEENKWIFSNVNIYNVETKETTAK----TEYKSNLYKDDP 237 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYR---PELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 S + + + + + E Y +E KR + I I + Sbjct: 238 SNFIRASAEDPRMLTIKELKKTIKEQKNIGEDTRIYLAELAKRYSFPFASFIVAFIGLSV 297 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIF 350 VR + + I + +G + S + N P + ++ I Sbjct: 298 --SSKYVRGGRTTMNLVICVVAGYGYYLV-SGAFEAMSLNGILNPFIASWVPNILYLIIG 354 Query: 351 LLMIKK 356 + + + Sbjct: 355 IYFMNR 360 >gi|189464158|ref|ZP_03012943.1| hypothetical protein BACINT_00494 [Bacteroides intestinalis DSM 17393] gi|189437948|gb|EDV06933.1| hypothetical protein BACINT_00494 [Bacteroides intestinalis DSM 17393] Length = 632 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 42/270 (15%), Positives = 102/270 (37%), Gaps = 22/270 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K +++IL+ F+ + +FI + + + ++ + +++L + Y T+ Sbjct: 4 IKKLDIFILKSFCTLFMGTFFICLFIFMMQFLWKYVDEMVGKGLEMSVLAQFFFYSALTL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P P + + ELL + G S + +++P++ I + F +N+ Sbjct: 64 VPASLPLAILLAALITFGNFGERFELLAMKAAGISLLKIMRPLIVFIIFICGVSFYFQNV 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 I PK ++ + L + + E +F+ D + + N L + I + Sbjct: 124 IGPKAQTKLWTLLISMKQKSPELDIPEGVFYDEIDGYNLYVKHKNRKTGMLYDVLIYNFE 183 Query: 180 DT-QTHKIYYAQSGSIDLDRQ----AIILNDGEV---------------HRKSPISKDIS 219 + +I + SG +++ + L +GE +R+ + + Sbjct: 184 KGFENAQIIKSDSGRLEMTADKQHLYLHLYNGEQFENLKSQNMNQKNVPYRREAFREKHA 243 Query: 220 IMKFKSYTLQTESANSSTIVLKANDQNLSF 249 I++F S A + + D + Sbjct: 244 IIEFNS-DFNMVDAGIMSSQSNSKDMAMLQ 272 >gi|260062387|ref|YP_003195467.1| hypothetical protein RB2501_12362 [Robiginitalea biformata HTCC2501] gi|88783950|gb|EAR15121.1| hypothetical protein RB2501_12362 [Robiginitalea biformata HTCC2501] Length = 360 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 54/360 (15%), Positives = 129/360 (35%), Gaps = 8/360 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + YIL+ +F + L V I ++ + ++I + + L +L G + Sbjct: 2 LTIIDRYILKKYLSTFGLMLLLFVPIGIMLNLAEQIGKMIDNEAPLVEILIYYGNFTIYI 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + + M NTE++ I ++G S ++P A ++++ +F+ Sbjct: 62 GSLLFPIFLFLSIIFFTSKMANNTEIVAILSSGVSFGRFLRPYWIGASIIAVLMFLMGMF 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + K + + N+F +L + YI +S ++P + F + Sbjct: 122 IVPSASKGFNEFKFKYLKKGSKDRVTSNIFNQLGESDYIYVSSFDPARQIGYNFTYEHFG 181 Query: 181 TQTHKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 Y S +I + L ++ + + + + + + Sbjct: 182 EDGELEYKISSANIRWLEEDSLYRLTSYTRRNLRGDTEIVETRRRLDTLFAFQIDDLTPV 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 A +NL L + + TY +KR + + +I + ++ Sbjct: 242 SYIAETKNLFELNQFIADQRRKGASNVNTYVMVKYKRWALPVTAFVLTIIGVAV---SSI 298 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--FCISSIFLLMIKK 356 R+ + + ++F + EQ+ + P+L + + + M++K Sbjct: 299 KRRGGMGVNLAFGIGVAFIYIFMDKVFGTLAEQSG-FPPLLAVGIPNIFFLVLGYFMLQK 357 >gi|297171743|gb|ADI22735.1| predicted permeases [uncultured verrucomicrobium HF0500_27H16] Length = 412 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 48/362 (13%), Positives = 123/362 (33%), Gaps = 10/362 (2%) Query: 5 ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 + ++ +SF ++ I+ + ++ + + + +L+ L P +L V Sbjct: 51 DRHLASEWLKSFGITTGAILGLFYIQNLYDNLGDLLEHGAGAAEILQYYLILTPALLSPV 110 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P + T S++RN E+ + + G S +L++ +FLA LLS+ LF+ N K Sbjct: 111 LPLSVLVATLFSYGSLHRNQEITAMRSMGRSVWSLMRVNMFLAALLSVGLFLLGNGGLSK 170 Query: 125 CRSTIKQLSAKAQL------ALTFSYLEENLFFRLDD-DLYIKISKYNPNNTLQGIFIVD 177 ++ + + + ++ F L++ + G+++ Sbjct: 171 SAEKSREFYEELMQPPFDPASAEVATIKHLTFENASSHRLWVMNRYDPSKHKGHGVYLYL 230 Query: 178 SR-DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + +++ + + +G + + F+ ++ + + Sbjct: 231 RYVSGKARERFTSRTAEFMPETATWVFREGRQVFFDEAGLSLRFVDFEELKMEGLESPLT 290 Query: 237 --TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 K +D +L L + + Y +H+ L ++ L+ + A Sbjct: 291 LLARQKKLSDLSLRELRELAEVSQGGQGSEARRYGVRYHQALAGPFNCMLALLVGVPFAI 350 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 V F + + + P L + L ++FL+ Sbjct: 351 AGTRVNPMVGATKAIGIFVGYFLLGGASRMLGQQGILEPAVAGWLPMGLMAFYALFLIGR 410 Query: 355 KK 356 + Sbjct: 411 VR 412 >gi|152985629|ref|YP_001346669.1| hypothetical protein PSPA7_1284 [Pseudomonas aeruginosa PA7] gi|150960787|gb|ABR82812.1| membrane protein, putative [Pseudomonas aeruginosa PA7] Length = 355 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 55/362 (15%), Positives = 123/362 (33%), Gaps = 14/362 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + L I+ +A + + +N + S++ + L+ P Sbjct: 1 MVKLDRYIGVTVFVAILAVLGVILGLALLFAFIDELNDI-SASYGIGEALRFIALTAPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ N+EL I+ G S ++ V+ ++L + + Sbjct: 60 AYDMLPMAALIGCLVGLGTLASNSELTIMRAAGVSLSRIVWAVMKPMLVLMLAGILVGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF-IVDSR 179 + P + + A AQ + L+ YI I+ PN L G+ Sbjct: 120 VAPWTENIAQSGRALAQGGGDSQSSKRGLW-HRQGREYIHINAVQPNGVLYGVTRYRFDE 178 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKF--KSYTLQTESANSST 237 +A+ + D L D P K ++K + + Q +T Sbjct: 179 QRGLQSASFAKRARFETDH--WQLEDVTTTLLHPQEKRSEVVKLPTERWDAQLSPQLLNT 236 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWL--FPVIFGLISIVAADK 295 +V++ ++S L + + Y F ++ Q L ++ IS + Sbjct: 237 VVMEPEALSISGL-WQYIHYLADQGLNNNRYWLAFWTKVLQPLVTAALVLMAISFIFGPL 295 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 R++ ++ IF + + F + + + + ++ L + Sbjct: 296 RSVTLGQR----IFTGVLVGFVFRIAQDLLGPSSLVFDFPPLLAVVIPASACALAGLWLL 351 Query: 356 KK 357 ++ Sbjct: 352 RR 353 >gi|118602490|ref|YP_903705.1| permease YjgP/YjgQ family protein [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567429|gb|ABL02234.1| permease YjgP/YjgQ family protein [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 371 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 62/370 (16%), Positives = 143/370 (38%), Gaps = 28/370 (7%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 Y++R + + + I + + Q++ I S + LL + G + + Sbjct: 16 SILARYLMRNVSVLLSVVFIVISLVVFGNQLVLIIKETSKEGIPIADLLPLVGLNMIRDV 75 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 ++ + ++ + + +E +++++ G + + L I++ IF+FI ++ Sbjct: 76 VLILSLSLLLAIILSVSKLYKASEAIVMNSLGLGDKHFMVFIQPLVIVIVIFIFILTTVV 135 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRL-DDDLYIKISKYNP-----NNTLQGIFI 175 P + + +++ FS++++N F ++D+ SK + ++ IFI Sbjct: 136 VPWSKQQRGLIMERSENTPEFSFIKKNEFQEFKNNDIVFYASKVSDADNAKEQNMEEIFI 195 Query: 176 VDSRDTQTHKIYYAQSGS----IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 + I A+ + + + L +G + P +K+ I+ FK Y LQ Sbjct: 196 YTLVN-NEPVITLAKQAQKYTNFNTNSVYLRLKNGTRYHGFPSNKNKKILNFKLYDLQII 254 Query: 232 SANSS---TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 + V K ++ LL N +EF R++Q L +I + Sbjct: 255 DGKMQKSISTVTKVESKSTFELLFSNKLTE----------IAEFQWRISQPLSILI---L 301 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 S++ + K + + + + F V+ I + PI+ L+ + Sbjct: 302 SVLGVLLGKTSPRSGKNLGVLVGV-VMFIVYNNVLLIAKSTLERGESSPIVGLWWVHLVM 360 Query: 349 IFLLMIKKKY 358 + L+ I K+ Sbjct: 361 LLLIFIFYKW 370 >gi|56461046|ref|YP_156327.1| permease [Idiomarina loihiensis L2TR] gi|56180056|gb|AAV82778.1| Predicted permease [Idiomarina loihiensis L2TR] Length = 356 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 50/360 (13%), Positives = 131/360 (36%), Gaps = 13/360 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI + R+ L+S + ++ +I+ ++++ V ++ Y +P + Sbjct: 3 SILDKYIGLSVLRTSLLSLAVLTGLSSLIRFVEQLKAVGRGDYNVMDAALFVFYSLPRDV 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + + + N+EL+++ G SR+ +I V+ AI++ + + I Sbjct: 63 ETFFPMAALLGGLIGVGMLASNSELVVMMAAGRSRLNIIGAVMKSAIIMMVAVMAIGEWI 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + + ++A + ++ ++ + D +I I + L + I D D Sbjct: 123 APPMEAQGRAIRSQAISGGSLISAQQGVWAKDGSD-FINIGEVEDTGRLNDVLIYDFNDN 181 Query: 182 QT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL----QTESANSS 236 + K+ YA++ + D+ + V + DI +++ + ++ Sbjct: 182 RELQKVTYARTANFSGDK--WRMQQVTVTQLD----DIRMLRDEKPSMVWQSSLTPDKLG 235 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + +K +++ LL+ + E Y ++L + + L+++ Sbjct: 236 VVTIKPESLSITGLLD-YLTYLESNQQSAERYELALWRKLFAPITVAVMLLVALSFIFGP 294 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + F V + ++ Q P + L + M + Sbjct: 295 LRSTTMGARILLGVITGFGFHVSNEIFGPLAQVYQIPAILGALLPSILFAGVAVYFMRGR 354 >gi|224536882|ref|ZP_03677421.1| hypothetical protein BACCELL_01758 [Bacteroides cellulosilyticus DSM 14838] gi|224521506|gb|EEF90611.1| hypothetical protein BACCELL_01758 [Bacteroides cellulosilyticus DSM 14838] Length = 632 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 88/208 (42%), Gaps = 4/208 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K +++IL+ F+ + +FI + + + ++ + +++L + Y T+ Sbjct: 4 IKKLDIFILKSFCTLFMGTFFICLFIFMMQFLWKYVDEMVGKGLEMSVLAQFFFYSALTL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P P + + ELL + G S + +++P++ IL+ F +N+ Sbjct: 64 VPASLPLAILLAALITFGNFGERFELLAMKAAGISLLKIMRPLIVFIILICGVSFYFQNV 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 I PK ++ + L + + E +F+ D + + N L + I + Sbjct: 124 IGPKAQTKLWTLLISMKQKSPELDIPEGVFYDEIDGYNLYVKHKNRKTGMLYDVLIYNFE 183 Query: 180 DT-QTHKIYYAQSGSID--LDRQAIILN 204 + +I + SG ++ D+Q + L+ Sbjct: 184 KGFENAQIIKSDSGRLEMTADKQHLYLH 211 >gi|33602710|ref|NP_890270.1| putative integral membrane protein [Bordetella bronchiseptica RB50] gi|33577152|emb|CAE35709.1| putative integral membrane protein [Bordetella bronchiseptica RB50] Length = 370 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 33/243 (13%), Positives = 93/243 (38%), Gaps = 6/243 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ ++ I + +V + + +++ + + + +++L ++ + T Sbjct: 1 MSLFKRSVVSEITSHAGVVFSTLVVVWLSVLLVRLLGEAAGGSIGADVVLGLAAFSTITA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP + + +T R +E+++ +G S ++PV +A+ +++ + + Sbjct: 61 LPTILAVSLFIAVLTTVTRNYRESEMVVWFASGLSLADWLRPVARVAVPIAMLVAALTLV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISK--YNPNNTLQGIFIVDS 178 P I + + + S + F + ++ P + L +F Sbjct: 121 ASPWAYRQIGEYRERFEQRSDLSKVTAGQFAESGRGDRVFFAEDPVRPGDELGAVFARSI 180 Query: 179 RDTQTHKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 D + + A + + + ++L +G + P + +I ++ F Y ++ ES Sbjct: 181 -DPEWLSVLTASNARSETLPNGDRFLVLGEGHRYDLKPGTPEIRLVNFDQYGVRLESKAG 239 Query: 236 STI 238 Sbjct: 240 EDP 242 >gi|153827723|ref|ZP_01980390.1| inner membrane protein YjgP [Vibrio cholerae MZO-2] gi|149737800|gb|EDM52705.1| inner membrane protein YjgP [Vibrio cholerae MZO-2] Length = 199 Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 30/196 (15%), Positives = 73/196 (37%), Gaps = 2/196 (1%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + ++ + S +++L I G +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASDGEIPTSMILSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LA++ + + + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RD 180 P + L + + L++ F R D + N L +F+ RD Sbjct: 122 PWSQDKEAHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLYNVFVAQLAPRD 181 Query: 181 TQTHKIYYAQSGSIDL 196 + + ++ SG + Sbjct: 182 SILPSVMFSHSGDVKE 197 >gi|163750107|ref|ZP_02157350.1| hypothetical protein KT99_20606 [Shewanella benthica KT99] gi|161330164|gb|EDQ01146.1| hypothetical protein KT99_20606 [Shewanella benthica KT99] Length = 352 Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 52/355 (14%), Positives = 131/355 (36%), Gaps = 15/355 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK +LYI R + S + L + ++ +I+ + ++ +V ++ +LIP Sbjct: 1 MKILDLYIARTLVSSSALCLLILTGLSGIIKWVDQLRVVGRGNYTMLDAGIYVLFLIPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + + + +EL+++ + G SR + + A+ L + + + Sbjct: 61 IEIFFPMAVLLGALIGMGMLASGSELVVMQSAGLSRFQITLSAMKTAVPLMLMIMVLGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P +L A + ++ + D DL++ I + N+L+ I + + Sbjct: 121 GAPAAERRANELQAFKVSGGSLIKSSRGIWAK-DGDLFVNIGEVENINSLRNITLYEFDS 179 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 T K +A+ G D ++ D + ++ + + S + Sbjct: 180 TLTLVKTIHAERGVYSNDHWRLL--DVRQIDLTKDKVTLTDLTLYRWDSTLTPDKLSVVS 237 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 +K ++ LL + + Y +++ Q + + L+++ Sbjct: 238 VKPESLSIQGLLG-YLDYLEANNQNSGRYELALWRKIMQPVTVAVMMLVALSFVFGP--- 293 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + + + + GV GF++ I P + ++Y + ++ +I Sbjct: 294 -----LRSVTMGARVLLGVIAGFTFYISSEIFGP--LTLVYGLPAFLGAVMPALI 341 >gi|121611823|ref|YP_999630.1| permease [Verminephrobacter eiseniae EF01-2] gi|121556463|gb|ABM60612.1| permease YjgP/YjgQ family protein [Verminephrobacter eiseniae EF01-2] Length = 369 Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 59/375 (15%), Positives = 129/375 (34%), Gaps = 26/375 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQI---LQRINLVSSSTESLNILLKISGYLI 57 MK+ I R + + + + + L+ + L L+ L I Sbjct: 1 MKTIRRLIHREALSAVCFVTAGFLALFFFFDLIDELRWVGLAGREGYHLSHALLFVALGI 60 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 P+ L + P + T V+ + +++E I+ +G ++ +L L + F Sbjct: 61 PSHLYELLPITVLIGTIFVMARLAQSSEFTIMRTSGMGPWRALRTLLTLGGFFVLLTFAV 120 Query: 118 ENIIEPKCRSTIKQLSAKAQLALTF----SYLEENLFFRLDDDLYIKISKYNPNNTLQGI 173 + + P T +++ A A LT ++L+E + + PN ++ + Sbjct: 121 GDYLAPWTDRTAQRIKAHALGGLTSGATGAWLKERQDRHSF---AVNVRALTPNGGMRDV 177 Query: 174 FIVDSRDTQTHKIYY-AQSGSIDLDRQAIILNDGEVHRKSPISK--DISIMKFKSYTL-- 228 I + D A G D A L R + D + + L Sbjct: 178 RIFEFDDQGRLVTQTRATVGRFATDG-AWELAQVRRSRFARGDGQDDARVEHLDAPALRW 236 Query: 229 --QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFG 286 + + + +LK + L + N + + Y EF ++L L ++ Sbjct: 237 PTRISADMVAASLLKPDRMATLDLF-QFIRHLNANGQSTQRYAIEFWRKLFYPLSCLVMV 295 Query: 287 LISIVAA--DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI----PILY 340 ++++ A R+ + +S F + F Y + +P+ ++Y Sbjct: 296 VLALPFAYLHLRSGGTAGYVFGGVMAGISF-FLLNNVFGYAGNLQNWSPWLTAAAPGLIY 354 Query: 341 LFLFCISSIFLLMIK 355 L + +L++ + Sbjct: 355 SLLSLAAFGWLVLRR 369 >gi|304413751|ref|ZP_07395195.1| inner membrane component LptG of LptABCFG lipopolysaccharide transporter [Candidatus Regiella insecticola LSR1] gi|304283842|gb|EFL92236.1| inner membrane component LptG of LptABCFG lipopolysaccharide transporter [Candidatus Regiella insecticola LSR1] Length = 358 Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 51/357 (14%), Positives = 129/357 (36%), Gaps = 4/357 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI R I + LM+ +V ++ +I+ ++++ + + S+ + +P + Sbjct: 5 GVLDRYIGRNILHTILMTLFMLVSLSGIIKFIEQLRKLGEGSYSVLGAGIYTLLSVPKDI 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ +EL+++ +G +R + V+ AI L + + + Sbjct: 65 EIFFPMAALLGVLFGLGTLASRSELIVMQASGFTRTQIASAVMKTAIPLVLLTMVIGEWV 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI-VDSRD 180 P K + L+ R ++ ++ I+ +NTL G+ I ++ Sbjct: 125 APLSERIASDYRTKMIFGGAILTTQSGLWARDGEN-FLYINHILNDNTLSGVNIYHIDQE 183 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + YA + + + + D E + S + + + + Sbjct: 184 NRLLSVRYAATATFKDNVWQLSQVD-ESDLSDAKKINGSKTLTGEWKINLTPDKLGIVSV 242 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + +S L + + E L Y+ ++ L + L+++ Sbjct: 243 DPDSLPISGLRDYIQYLKQNKQESL-RYQLIMWNKIFSPLSVAVMMLVALSFIFGPLRTV 301 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + I++ F V + + + P I L L + + L++K++ Sbjct: 302 TMGVRVMVGIAVGFLFYVLNQIFGPVSLVYKMPPVIGALLPSLLFLLVSWYLLLKRR 358 >gi|33597808|ref|NP_885451.1| putative integral membrane protein [Bordetella parapertussis 12822] gi|33574237|emb|CAE38569.1| putative integral membrane protein [Bordetella parapertussis] Length = 370 Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 33/243 (13%), Positives = 93/243 (38%), Gaps = 6/243 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ ++ I + +V + + +++ + + + +++L ++ + T Sbjct: 1 MSLFKRSVVSEITSHAGVVFSTLVVVWLSVLLVRLLGEAAGGSIGADVVLGLAAFSTITA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP + + +T R +E+++ +G S ++PV +A+ +++ + + Sbjct: 61 LPTILAVSLFIAVLTTVTRNYRESEMVVWFASGLSLADWLRPVARVAVPIAMLVAALTLV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISK--YNPNNTLQGIFIVDS 178 P I + + + S + F + ++ P + L +F Sbjct: 121 ASPWAYRQIGEYRERFEQRSDLSKVTAGQFAESGRGDRVFFAEDPVRPGDELGAVFARSI 180 Query: 179 RDTQTHKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 D + + A + + + ++L +G + P + +I ++ F Y ++ ES Sbjct: 181 -DPEWLSVLTASNARSETLPNGDRFLVLGEGHRYDLKPGTPEIRLVNFDQYGVRLESKAG 239 Query: 236 STI 238 Sbjct: 240 EDP 242 >gi|225848004|ref|YP_002728167.1| permease, YjgP/YjgQ family [Sulfurihydrogenibium azorense Az-Fu1] gi|225644087|gb|ACN99137.1| putative permease, YjgP/YjgQ family [Sulfurihydrogenibium azorense Az-Fu1] Length = 339 Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 52/252 (20%), Positives = 100/252 (39%), Gaps = 12/252 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YIL+ + F++ + Q+L N S +L L++ + + Sbjct: 1 MKILHRYILKNFFKKFIILIGLFSIVITSSQLLHLPNFAYS--MNLIDFLQLLVMIDISF 58 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L F F + V S+ N E+ + + G S+ L+KPV L + I Sbjct: 59 LKYQILFGFFIAWLLVGVSIRENNEIYAVYSLGVSQKELLKPVFITTTLFTALALIVSIT 118 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + ++ F ++++++ + N+TL I I + Sbjct: 119 LIPYANQERSKFLTLKVKNYILESIQPKNFSKINENISVYTESKE-NSTLHKIIIY---N 174 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + A+ G D+ ++L DG +H P K S++K++ Y+ +++ I L Sbjct: 175 KSNKYLITAKEGIFFQDK--VVLKDGYIH--IPSEKSFSVIKYEKYSFSLDTSYVKEIPL 230 Query: 241 KANDQNLSFLLN 252 + D S L+N Sbjct: 231 E--DYKTSQLIN 240 >gi|312879634|ref|ZP_07739434.1| permease YjgP/YjgQ family protein [Aminomonas paucivorans DSM 12260] gi|310782925|gb|EFQ23323.1| permease YjgP/YjgQ family protein [Aminomonas paucivorans DSM 12260] Length = 337 Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 52/333 (15%), Positives = 116/333 (34%), Gaps = 11/333 (3%) Query: 32 ILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDN 91 + + +LV SL +++++ Y +P V+ + P + ++ N E++ + Sbjct: 9 LFKIADLVIQRGVSLGVVVRLFLYYLPGVVVLTIPMGSLLAALLGFGRLSANVEIVALKA 68 Query: 92 TGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFF 151 G + +++PV++ ++L+S+ + P L + T +E +F Sbjct: 69 AGVAFQRIVRPVIWASLLVSLGSMALNETLVPLAERAAVNLLRYEVMQETPPLFKERIFL 128 Query: 152 RLDDD----LYIKISKYNP-NNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDG 206 + + D I I++ P + + I + + + + +I A G + DG Sbjct: 129 KEEKDGHLKRVIYINRMRPRSGKMADILVQEFEEDRLSRIIAAPRGEWVRGE--WWIEDG 186 Query: 207 EVHRKSPISKDISIMKFKSYTLQTESANS--STIVLKANDQNLSFLLNPNPNNPNYRPEL 264 +V K + F+ LQ T L NL + + + + Sbjct: 187 KVFEVDAQGKVRLLFTFRKQGLQLHLNPKEVETQSLDPQQMNLFQMRD-SIRRLEEQGAD 245 Query: 265 LETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSY 324 R + RL V+ L+ AA R + + + + V F Sbjct: 246 ATRLRVLLNLRLAVPWASVVLALVG-AAAGSRPQRSSSSVGLGLSVVIVFFYYVTLSFCQ 304 Query: 325 IIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + P + + L + L+ + Sbjct: 305 SLGEASYLPAVVAAWFPNLIFLVLGGFLVRRSN 337 >gi|296448501|ref|ZP_06890381.1| permease YjgP/YjgQ family protein [Methylosinus trichosporium OB3b] gi|296254000|gb|EFH01147.1| permease YjgP/YjgQ family protein [Methylosinus trichosporium OB3b] Length = 387 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 47/364 (12%), Positives = 119/364 (32%), Gaps = 12/364 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y+ R I S + + + + ++ + +L PTV+ Sbjct: 3 RLLFTYLARRILFSMAVVQFALSVPVVLS---YLLYTLTPAAIRAGLLAPALIGTTPTVV 59 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + T M+ + ++ S ++ +P + A + + + N+I Sbjct: 60 YITLPMAIGVATALEFARMSSEGMIAVLYALRLSVWSVCRPAIVCAGAMVLIGYGLANLI 119 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNNTLQGIFIVDSR- 179 P ++ + + L LE F+ D+ L + + ++ + +F+ Sbjct: 120 APHYAGALQDVINVVRNTLNHRMLEPARFYTFDNGLKTLYLERWETPDIAVNLFVRQLSL 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAII--LNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A +I L+ G + + S ++ I F Y + S + Sbjct: 180 AKNQEETITAARAEFRRTPSGVILALSHGSIQTRPFDSTEVRIAGFDEYAMALPMQGSES 239 Query: 238 IVLKA----NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + ++ + L N + L + +E KR L+++ Sbjct: 240 LPARSWRGVYEMGPLEFLG-NWSVARLDRRLSGEWAAEAAKRFGMPALSFAHTLLAMALV 298 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 V R+ F+ +++ + + + +P Y +L + + + Sbjct: 299 LTFGNVTGRRGASSSFVMIAVPATHIFFLVALETLLRADPRYAILLAALICVEIATAATL 358 Query: 354 IKKK 357 I ++ Sbjct: 359 ISRR 362 >gi|15806095|ref|NP_294799.1| hypothetical protein DR_1075 [Deinococcus radiodurans R1] gi|6458807|gb|AAF10648.1|AE001958_2 conserved hypothetical protein [Deinococcus radiodurans R1] Length = 394 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 56/388 (14%), Positives = 123/388 (31%), Gaps = 42/388 (10%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 Y+ R + L L I + S ++++ + GY +P L Sbjct: 15 TRLTRYVTRELLPPLLAGTLLFTAILSFGYFFISSQWL--SGVPVSLIARWIGYQLPDTL 72 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 V P + T MN EL+ + G + +P + +L++ + Sbjct: 73 VKVLPMAVVLMTVVAFGRMNTERELVAVQAGGIGLGRVTRPAAVVGLLVTALSVWLSLWV 132 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIV--DS 178 P+ + L A S L L L + + Y+ +QG+ + D Sbjct: 133 APRANVETRGLYWDALTGAGLSQLV-GKTVDLGQGLTLAMQGYDAGARQMQGVRVEKWDK 191 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKS-------PISKDISIMKFKS------ 225 + + + +A +G + ++ + L +V+R D F+ Sbjct: 192 DNFRQGMVVFADAGKFEGNQ--LSLTGYQVYRVDYAAAAALSGVADNDPAAFREAVQKVF 249 Query: 226 ------------YTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLET----YR 269 L T + T+ A+ P P + ++ R Sbjct: 250 PLVQVPEDRNAALNLDTGLSRKQTLAQYADAIGADAEGWPELITKLTAPGVPQSERDAAR 309 Query: 270 SEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI 329 +++L ++ L ++ A + R + ++L I+ + FS + Sbjct: 310 VNLNRKLALPFANLVLVLAALPFALRFG----RTLGVSLGVALVIAVAYYLLFSVGLTLA 365 Query: 330 EQNPYYIPI-LYLFLFCISSIFLLMIKK 356 P + ++L + L ++++ Sbjct: 366 GLLPGLPELGVWLANIVFALGGLWLLRR 393 >gi|170725440|ref|YP_001759466.1| permease YjgP/YjgQ family protein [Shewanella woodyi ATCC 51908] gi|169810787|gb|ACA85371.1| permease YjgP/YjgQ family protein [Shewanella woodyi ATCC 51908] Length = 352 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 48/353 (13%), Positives = 127/353 (35%), Gaps = 6/353 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + YI R + + + L + ++ +I+ + ++ +V + ++ +LIP Sbjct: 1 MRILDFYIARTLVSTSALCLLILTGLSGIIKWVDQLRVVGRGSYTMLDAGIYVLFLIPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + + N+EL+++ + G SR+ + + A+ L + + Sbjct: 61 IEMFFPMAVLLGALIGMGMLASNSELVVMQSAGLSRLQITLSAMKTAVPLMLIIMALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SR 179 P +L A + ++ + D DL++ I + N L+ I + + Sbjct: 121 GAPAAEQKAYELQATKISGGSLIKSSRGIWAK-DGDLFVNIGEVEDINNLRNITLYKFNS 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 D + +A+ G D ++ D + ++ + + S + Sbjct: 180 DLALTRTIHAERGVFSKDHWRLL--DVRQTDLTDERVTLTDLTLYRWESTLTPDKLSVVS 237 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 +K ++ L+ + + Y ++ Q + + L+++ Sbjct: 238 VKPESLSIQGLIG-YLDYLEVNNQDASRYELALWRKFMQPVTVAVMMLVALSFVFGPLRT 296 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP-ILYLFLFCISSIFL 351 + + SF + + + P YI ++ +F + +I+ Sbjct: 297 VTMGARVLLGVIAGFSFYISSEIFGPLTLVYGLPAYIGAMMPALIFGVGAIYF 349 >gi|77165378|ref|YP_343903.1| permease YjgP/YjgQ [Nitrosococcus oceani ATCC 19707] gi|254434004|ref|ZP_05047512.1| putative permease, YjgP/YjgQ family [Nitrosococcus oceani AFC27] gi|76883692|gb|ABA58373.1| permease YjgP/YjgQ [Nitrosococcus oceani ATCC 19707] gi|207090337|gb|EDZ67608.1| putative permease, YjgP/YjgQ family [Nitrosococcus oceani AFC27] Length = 354 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 48/358 (13%), Positives = 121/358 (33%), Gaps = 4/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI + + L+ ++ + +Q + + V + L+ + Y IP Sbjct: 1 MKILDRYIAKAVISYTLLVLFILIALYTFLQFVTELEDVGEGDYGVMGALRYTTYSIPQH 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + + L + +EL+ + G S + L ++ I + + Sbjct: 61 IYDLLPVAALLGSVLGLGYLAGQSELVAMRAAGFSVGRITLSALATGMIFVIVTVLMGEV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + +L + A+ + F+ + + + + + PN + I I + D Sbjct: 121 VAPPAQQAANKLRSLAKTGHLSEDGGQG-FWSRNGNNFNHVGRVLPNGQYEYIEIFEFDD 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + +I Q+ + L D S + + +++ Sbjct: 180 QRRLRIVT-QAARAIYHKDGWHLYDVTQRLISTKGITTRRLDEALWESGLNPEMLDVVMV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + L + E YR F ++ +I ++I Sbjct: 239 DPQQLSAWGLYR-YIGYLQKSKQAAEQYRQAFWSKIVAPFSTLIMMFLAIPFIFGPLRSV 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + + + I F +F + + P ++ + L C+ ++ ++M+++ Y Sbjct: 298 SVGQRILVGALVGIGFFLFNRLFNQLGLVFDLPPWLGAAFPSLLCL-ALGVVMLRRIY 354 >gi|319896845|ref|YP_004135040.1| inner membrane protein [Haemophilus influenzae F3031] gi|317432349|emb|CBY80704.1| conserved inner membrane protein [Haemophilus influenzae F3031] Length = 358 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 56/362 (15%), Positives = 135/362 (37%), Gaps = 11/362 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + + YI + I + + L +V ++ +I+ +++ V T + + +G IP Sbjct: 2 MNTLDRYIGKSILGAIFATLLTLVGLSAIIKFVEQFRSVGKGTYDIWQAVAFTGLTIPKD 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ +EL+++ + G SR + V+ A L + + Sbjct: 62 IETFFPMAALLGALIALGNLASRSELVVMQSAGFSRFKIGIAVMKTASPLVLLTMMIGEW 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SR 179 P+ + + AKA + ++ ++ + D ++ + + + L I+I + Sbjct: 122 GIPQTEQFARDMRAKALSGGSILSIKNGVWAK-DGHHFVFVRRVTDDTKLDDIYIYTFEQ 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS--T 237 K+ +A S D L +V+ + +I S T +T Sbjct: 181 QHNLIKLKHANQASYSEDEAKWTLR--QVNHSTITKDEIITTNHLSETWETSLTPDKLGA 238 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L+ ++S L + + + + + F +++ Q + + L+++ Sbjct: 239 VSLRPTSLSISGLYH-YISFLRETGQDVSRFELTFWRKIFQPVSVGVMMLLALSFIFG-- 295 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHK--IEQNPYYIPILYLFLFCISSIFLLMIK 355 +R I + + F + + + P L L I I+ L+ + Sbjct: 296 SLRSVTAGARIVTGICVGFLFYVVNEILGQTSVVYGIPAIFGALIPSLLFIVMIWWLLSR 355 Query: 356 KK 357 K+ Sbjct: 356 KR 357 >gi|268592782|ref|ZP_06127003.1| membrane protein, YjgP/YjgQ family [Providencia rettgeri DSM 1131] gi|291311563|gb|EFE52016.1| membrane protein, YjgP/YjgQ family [Providencia rettgeri DSM 1131] Length = 358 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 60/358 (16%), Positives = 132/358 (36%), Gaps = 5/358 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI R I S L++ +V +A +I+ ++++ V + + +P + Sbjct: 3 GVLDRYIGRTILNSILVTLFLLVSLAGIIKFVEQLRKVGDGDYTALSAGVFTLLTVPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ +EL+++ +G +R+ + V+ A+ L I I Sbjct: 63 DIFFPMAALLGALMGLGALASRSELVVMQASGFTRLQIALSVMKTAVPLVIVAMFIGEWI 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + A+ + + +E ++ + +D +I I + N ++Q + I D Sbjct: 123 APAGEQWARNYRAEKIVGNSLVVTDEGMWAKDAND-FIHIQRINNATSIQDVSIYRFDDQ 181 Query: 182 QT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-DISIMKFKSYTLQTESANSSTIV 239 + + +A +G D Q +L+ + S K S + + Sbjct: 182 RKLKSVMFAANGEYDSTNQLWVLSQVDESILSSEKKITGSQRLTVDWKTNLTPEKLGIVS 241 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR-AL 298 L A+ ++ L + ++ Y K++ L + L+++ Sbjct: 242 LNADSLSIRGLY-QYVSYLKESGQVAAVYELSMWKKILAPLSAAVMMLMAVSFIFGPLRT 300 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 V ++ + + + + GF P L LF I SI LL+ +K Sbjct: 301 VPMGVRVISGIVGGFLFYVLNQGFGNWSLVYSVPPIIAAALPSVLFLIVSITLLVKRK 358 >gi|87306756|ref|ZP_01088903.1| hypothetical protein DSM3645_10492 [Blastopirellula marina DSM 3645] gi|87290935|gb|EAQ82822.1| hypothetical protein DSM3645_10492 [Blastopirellula marina DSM 3645] Length = 380 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 55/364 (15%), Positives = 125/364 (34%), Gaps = 35/364 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M++ + Y++ + + F + L V + V +N +I+L + Y +P + Sbjct: 1 MRTIQTYVVWEVFKIFFLCLLATVLLMVVG---GGVNEGLKKGLPPSIILGMMPYFVPEM 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P C V M+ + E++ + + G + I +I PVL LS F ++ Sbjct: 58 LRFTIPGCLLFSICTVFGRMSASNEIVALKSAGINPIEIIWPVLVATYALSFVTFGLYDV 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLE-ENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 R + ++ ++ +S L + F +++ + ++ V + Sbjct: 118 CAGWSRPNMHRIIIQSLDDTAYSMLRTQKSFS--MQGFSVRVKGVDDRRLIEPFITVQTP 175 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILN-----------DGE-----------VHRKSPISKD 217 + A+ ++ + + L DG + + + +D Sbjct: 176 NGGPEFTLTAEEAELESNPETGALQVVCRNSFMEYGDGTNFSQVEPFVHQITQLGTLDQD 235 Query: 218 ISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLE----TYRSEFH 273 ++ + TL+ A + D + + +P Y E + ++E Sbjct: 236 LNSASPAALTLRHIPAQIAREAKLLEDTINALHIGGDPEAIAYAAEGHQKRLWRLQAERQ 295 Query: 274 KRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP 333 +RL+ L F + I A R + F+ GV++ + ++ Sbjct: 296 RRLSNGLGCFCFACVGIPVAMWRRTS---DNVTTFFLCFLPILGVYYPLLVTGETMARDG 352 Query: 334 YYIP 337 P Sbjct: 353 VLAP 356 >gi|315634607|ref|ZP_07889891.1| YjgP/YjgQ family membrane protein [Aggregatibacter segnis ATCC 33393] gi|315476555|gb|EFU67303.1| YjgP/YjgQ family membrane protein [Aggregatibacter segnis ATCC 33393] Length = 355 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 49/361 (13%), Positives = 134/361 (37%), Gaps = 10/361 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + E YI + I + + +V ++ +I+ +++ V T + + + +P Sbjct: 1 MNTLERYIGKSILGTIFATLFMLVGLSAIIKFVEQFRSVGKGTYDILQAIAYTVLTMPKD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ +EL+++ ++G SRI + V+ I L + + Sbjct: 61 VETFFPMAALLGALIALGNLASRSELVVMQSSGFSRIRIGIAVMKTTIPLVLLTMVIGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SR 179 P+ + + +KA + ++ ++ + ++ ++ + + + L I+I + Sbjct: 121 GIPQTEQFARDMRSKAISGGSMLSVKNGIWAKDGNN-FVYVRSISDDVELNDIYIYTFNE 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 Q K+ +A S + + + + + + I+ + + + Sbjct: 180 QRQLEKMKHANQASFNNGKWTLRQVNESRIQPDEVV-TINRLN-EDWETNLTPDKLGVAS 237 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L+ ++S L N + + + ++L Q + + ++++ + Sbjct: 238 LRPTSLSISGLSN-YIAFLKETGQDSRNFELTYWRKLLQPVSVGVMMMLALSFIFGP--L 294 Query: 300 RQRKKIHPIFISLSISFGVFW---GFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R I I +S F + F P ++ LF + + +LL ++ Sbjct: 295 RSVTAGARILIGISFGFLFYVVNELFGKFSLVYNTTPLIGALMPSVLFLLITWWLLARRR 354 Query: 357 K 357 Sbjct: 355 N 355 >gi|71277954|ref|YP_267493.1| putative permease [Colwellia psychrerythraea 34H] gi|71143694|gb|AAZ24167.1| putative permease [Colwellia psychrerythraea 34H] Length = 355 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 54/356 (15%), Positives = 130/356 (36%), Gaps = 3/356 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + YI R I + ++ V ++ +I+ ++++ + L Y +P Sbjct: 1 MRIIDFYIGRVIASTTFITLAVFVSVSGIIKFVEQMRAIGRGNYDLAHAALYVLYAVPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + + + N+EL+++ G SR+ +IK V+ A+LL I Sbjct: 61 VEVFFPMSALIGGLIGIGMLASNSELIVMQAAGLSRLDIIKSVMKTAVLLIIVSMAIGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + +++ A+A + + ++ + D D ++ I + L+ + I D Sbjct: 121 LAPSGEAKAREIRAQAISGGSLIAAKNGVWAK-DGDYFVNIGEVLDRGQLKKVQIYGFND 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + +I D+ +L D E + K + + + Sbjct: 180 ELKIDSWLSAKSAIYQDKS-WLLTDVEEFSLTENEIITKSHSQKIWNSSLTPKKLGVVTV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 +L L++ + + Y+ F +++ Q L + L+++ Sbjct: 239 TPESLSLRGLID-YLDYLEANEQDPSRYKLAFWRKIMQPLTVAVMLLVALSFIFGPLRSV 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + I F + + + Q P + + LF + + + KK Sbjct: 298 SMGARIMMGVFTGILFFISNEVLGSLSLVYQLPPILGAMIPSLFFVGIAWYFIGKK 353 >gi|258591110|emb|CBE67405.1| putative Permease YjgP/YjgQ [NC10 bacterium 'Dutch sediment'] Length = 362 Score = 109 bits (273), Expect = 7e-22, Method: Composition-based stats. Identities = 59/364 (16%), Positives = 129/364 (35%), Gaps = 16/364 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + Y+ + R S + + ++ ++ + R++ S ++++ Y +P Sbjct: 6 MRILDRYLAKEFLRICAFSLVIFLALSVIVDLFDRLSRFLD--VSGVVVIQYYIYRLPWF 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 V P + L M R+ ELL + S ++ P L L +++S I Sbjct: 64 GFQVMPVAVLLAALFSLGKMARHNELLAMKMGHLSIFRIVVPPLVLGLVVSFAALILGES 123 Query: 121 IEPKCR-STIKQLSAKAQLALTFSYLEEN-LFFRLDDDLYIKISKYN-PNNTLQGIFIVD 177 I P+ + K Q F + N +++R + ++ IS + +++G+ + + Sbjct: 124 IVPRMNERALDAYRVKVQKVSPFQRTKNNDIWYRAKGNRFLHISLLEAASGSIRGLTVFE 183 Query: 178 -SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 S D + + A+ + L +GE+ R P + F TL E Sbjct: 184 LSPDFRLARRIDAKEARWQDGQ--WRLQNGEISRTKPD-GTFRVDPFTHLTLYLEEKPED 240 Query: 237 -TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 V++ ++ S L Y+ + + + ++ I I A + Sbjct: 241 LAHVVREAEEMTSSELREYIERLAKAGVSSVRYQVDLAAKGSTAFTNLVMAFIGIAFALR 300 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN---PYYIPILYLFLFCISSIFLL 352 +R + + + S+ I + P L LF + + + Sbjct: 301 TG---KRGVMAWTGACVVAAVCYSILNSFSISLGRGDVLPPLVAAWLPNVLFTTAGLASV 357 Query: 353 MIKK 356 + K Sbjct: 358 LRIK 361 >gi|88800548|ref|ZP_01116110.1| predicted Permease [Reinekea sp. MED297] gi|88776693|gb|EAR07906.1| predicted Permease [Reinekea sp. MED297] Length = 350 Score = 109 bits (273), Expect = 7e-22, Method: Composition-based stats. Identities = 49/363 (13%), Positives = 134/363 (36%), Gaps = 20/363 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y+ I + F+ L ++ + +I + + + S N L + G+ +P +L Sbjct: 2 TLYRYLYGQIMKPFVFMTLVLLILLIATEISDTLTKILTGQFSDNALWVVIGFQVPILLQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAIL-LSIFLFISENII 121 + P F + L +++++E I+ G S L++ +L A L + + + I Sbjct: 62 EILPAAFFLACLTTLHRLSQDSERAILHAIGISDGDLLRFLLVFAALPAMLLVLALNHYI 121 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIK-ISKYNPNNTLQGIFIVDSR 179 PK + ++ + ++ N F+ + + + +L+ +F ++ Sbjct: 122 TPKAQENLELYVTEQLNRPITDIIDANSFYNIGAINATFYAARNNSQTQSLEDVF-TIAK 180 Query: 180 DTQTHKIYYAQSGSID--LDRQAIILNDGEVHRKS-PISKDISIMKFKSYTLQTESANSS 236 ++ + A+ + Q +GE + S S+ + +F L+ E ++ Sbjct: 181 SQSSYTVTAAKEVRTQGAENAQYFQFFEGEQTQFSFDESEPLQTQRFGMMQLRIEEDGNA 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + N L + + + L+ R L+ +F + ++V Sbjct: 241 SPWQRRNALTSFEL--AKSEDRHDQLTLI--------SRFATSLYLPLFCIWAVV---LT 287 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + K+ + + + + + + + + ++ I + F + + L+ + Sbjct: 288 RFKPRSAKVGAMALGIVLYILTNFAYRTLHGAVGRSDLSILFQPWWFFVVLGVIALITLR 347 Query: 357 KYT 359 Sbjct: 348 GRA 350 >gi|256027206|ref|ZP_05441040.1| hypothetical protein PrD11_04301 [Fusobacterium sp. D11] gi|289765183|ref|ZP_06524561.1| conserved hypothetical protein [Fusobacterium sp. D11] gi|289716738|gb|EFD80750.1| conserved hypothetical protein [Fusobacterium sp. D11] Length = 363 Score = 109 bits (273), Expect = 7e-22, Method: Composition-based stats. Identities = 57/365 (15%), Positives = 127/365 (34%), Gaps = 15/365 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K ++Y+ + + FLM+ + + + + Q + I ++ +L L+P + Sbjct: 2 IKKMDIYVSKYFIKFFLMNIIGFMGVFLLAQTFKIIKYINQGKLVGGEILDYILNLLPKM 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 P + ++ M N E++ + +G + +++ L +A ++S+ +F N Sbjct: 62 FVETAPLSVLLAGLITISIMASNLEIVSLKTSGIRFLRIVRAPLIIAFVISLIVFFINNS 121 Query: 121 IEPKCRSTIK-QLSAKAQLALTFSYLEENL-FFRLDDDLYIKISKYN-PNNTLQGI---- 173 I K + I + +L +EN F D + + N + I Sbjct: 122 IYTKSLAKINFYRRGEVDESLKLPTTKENAFFINNADGYLYLMGEINRETGVAENIEVVK 181 Query: 174 FIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 F + + I A+S D + I ++ ++ + I+ ++KS + + + Sbjct: 182 FETEISKPKE--IITAKSAKFDTEENKWIFSNVNIYNVD-TKETITKTEYKSKLYKDDPS 238 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 N + L E Y SE KR + I I + Sbjct: 239 NFIRASAEDPRMLTIKELKKTIKEQKSIGEDTRIYLSELAKRYSFPFASFIVAFIGLSV- 297 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFL 351 VR + + I + +G + S + N P + ++ I + Sbjct: 298 -SSKYVRGGRTTMNLVICVIAGYGYYLV-SGAFEAMSLNGILNPFIASWIPNILYLIIGI 355 Query: 352 LMIKK 356 + + Sbjct: 356 YFMNR 360 >gi|262341159|ref|YP_003284014.1| putative YjgP/YjgQ family permease [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272496|gb|ACY40404.1| putative YjgP/YjgQ family permease [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 359 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 62/365 (16%), Positives = 138/365 (37%), Gaps = 25/365 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 MK + YI+R + +F+ + + ++ VI I QR++ + ++ S+ L+ Y Sbjct: 1 MKILDRYIIRNLLITFIFITVSLQLLSVVIDISQRMHRLENNQGSIKKALIFYYPYWSIW 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E+ I ++G S LI P L AI++ + Sbjct: 61 LANTFSPISVFLSVIFFTSKLENNSEITAILSSGISLNRLIVPYLISAIMIGTVSLLINY 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEEN---LFFRLDDDLYIKISKYNPNNTLQGIFIV 176 P Q + L+ + E + ++ + YI I ++ + F+ Sbjct: 121 YFLPMANKKKNQFHYQYLLSSRYKNKYEKNQTISTQISKNEYIFIRNFSRKKNIGKEFVY 180 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAI-ILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + + ++ I +L+D +R++ I K+ Y ++ S Sbjct: 181 QKFNGKKLIYILKSKNIFGYKKKKIYVLSD---YRETTIKKNYDFFIKGDYKIKKFSFTP 237 Query: 236 STIVLKANDQNLSFLLN----PNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 ++ ++ ++ +N + + + + +E+++R + IF ++ Sbjct: 238 EELL---PEEYIAETMNIYELKKFIDIEKKNRNVNIHLNEYYQRTSLPFSTFIFTILGFS 294 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP---ILYLFLFCISS 348 + K++ I L I VF+ F I KI IP ++L + Sbjct: 295 LSSKKSET-------GYNIILGIVLAVFYIFFMEITKIYSTKDTIPSYLSVWLPNVLLGI 347 Query: 349 IFLLM 353 I L Sbjct: 348 IALFF 352 >gi|28899416|ref|NP_799021.1| putative permease [Vibrio parahaemolyticus RIMD 2210633] gi|153839669|ref|ZP_01992336.1| permease YjgP/YjgQ family protein [Vibrio parahaemolyticus AQ3810] gi|260363480|ref|ZP_05776316.1| conserved inner membrane protein [Vibrio parahaemolyticus K5030] gi|260879349|ref|ZP_05891704.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034] gi|260895692|ref|ZP_05904188.1| conserved inner membrane protein [Vibrio parahaemolyticus Peru-466] gi|260900264|ref|ZP_05908659.1| conserved inner membrane protein [Vibrio parahaemolyticus AQ4037] gi|28807652|dbj|BAC60905.1| putative permease [Vibrio parahaemolyticus RIMD 2210633] gi|149746812|gb|EDM57800.1| permease YjgP/YjgQ family protein [Vibrio parahaemolyticus AQ3810] gi|308087431|gb|EFO37126.1| conserved inner membrane protein [Vibrio parahaemolyticus Peru-466] gi|308093069|gb|EFO42764.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034] gi|308107540|gb|EFO45080.1| conserved inner membrane protein [Vibrio parahaemolyticus AQ4037] gi|308112550|gb|EFO50090.1| conserved inner membrane protein [Vibrio parahaemolyticus K5030] gi|328471447|gb|EGF42342.1| lipopolysaccharide ABC transporter permease [Vibrio parahaemolyticus 10329] Length = 356 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 58/358 (16%), Positives = 130/358 (36%), Gaps = 9/358 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +LYI R I + + V ++ +I+ ++++ V L L +P + Sbjct: 3 KILDLYIGRTIISTTALVLATFVGLSGIIKYVEQLRKVGRGVYDLTHALYFVLLSVPRDV 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++ + VL A+ L + + Sbjct: 63 EMFFPMAALLGALIGLGMLASSSELVVMQAAGFSKLDIGLSVLKTAVPLMLIVMTLGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + L + A + + ++ R +D +I I K + D Sbjct: 123 APEAQKMARDLRSFALSGGSIVSVRAGVWARDAND-FIFIGKVEDDKLYALNMWRFDDDK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-DISIMKFKSYTLQTESANSSTIVL 240 K+ +A+ D ++ D ++ + M + + + + Sbjct: 182 NLEKVIFAEEVDYQQDNN-WLMRDVQITNMQDENVISKQEMDQMEWHTSLAPDKLAVVTV 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADKRAL 298 K + +LS L + + Y F ++LTQ L + L++ V R++ Sbjct: 241 KPEELSLSGLYD-YVTYLKASEQDASRYELAFWRKLTQPLSIAVMMLMALSFVFGPLRSV 299 Query: 299 VRQRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + + + F+G +++ I P + + F ++ LL K Sbjct: 300 TMGARVLSGVVAGFTFYISSEFFGPLTLVYGIP--PIFGALAPSLAFLAIAVALLRRK 355 >gi|254282266|ref|ZP_04957234.1| permease YjgP/YjgQ family protein [gamma proteobacterium NOR51-B] gi|219678469|gb|EED34818.1| permease YjgP/YjgQ family protein [gamma proteobacterium NOR51-B] Length = 353 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 53/358 (14%), Positives = 115/358 (32%), Gaps = 7/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI R I +V + + I+ + S ++ G +P Sbjct: 1 MGKIDRYIGRAILGGTFAVLGVLVGLDALSTIVDEAEDL-SDRYGFIDMMSYVGLTLPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + PF + L + ++EL+++ + G S L V+ A+L ++ F+ + Sbjct: 60 IHEFMPFAALIGALVGLGRLAGSSELVVVRSAGVSIGQLAISVMKPALLAAVVGFVVGDF 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI-FIVDSR 179 I P A AQ + + + R D +I +S G+ Sbjct: 120 IAPSSEQLAITQRALAQRSESTVSARHGSWNR-DGGTFIHVSAVQRGGVAYGLSLFSFDE 178 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 D + A+ G+ D +L + + + +S + Q V Sbjct: 179 DKHLVRSLNAERGTYRGDH--WLLEEVVLTQLESEKTTVSQYLTWRWNTQITPDLLVLEV 236 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 ++ + L P + F +++TQ L L+++ Sbjct: 237 VEPESLPVFKL-WPWAKFLEQQGLTATDIELAFWRKVTQPLAIAGLVLVAMSFIFGPLRE 295 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + + F + F + P + + LFC + + ++ ++ Sbjct: 296 GSMGARIFAGVIVGVMFRISQDFFGPASVLFGLPPVLAAITPILFCWLA-GIWLLNRR 352 >gi|160887737|ref|ZP_02068740.1| hypothetical protein BACUNI_00139 [Bacteroides uniformis ATCC 8492] gi|317478670|ref|ZP_07937825.1| hypothetical protein HMPREF1007_00941 [Bacteroides sp. 4_1_36] gi|156862768|gb|EDO56199.1| hypothetical protein BACUNI_00139 [Bacteroides uniformis ATCC 8492] gi|316905181|gb|EFV26980.1| hypothetical protein HMPREF1007_00941 [Bacteroides sp. 4_1_36] Length = 633 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 44/298 (14%), Positives = 108/298 (36%), Gaps = 29/298 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K ++++L+ F+ + +FI + + + ++ + + +L + Y ++ Sbjct: 4 IKKLDIFVLKSFCMLFMGTFFICLFIFMMQFLWRYVDEMVGKGLEMTVLAQFFFYSALSL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P P + + ELL + G S + +++P++ + F +N+ Sbjct: 64 VPASLPLAILLAALITFGNFGERFELLAMKAAGISLLKIMRPLIIFICFICCVSFYFQNV 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 I PK ++ + L + + E +F+ D + + N L + I + Sbjct: 124 IGPKAQTKLWTLLISMKQKSPEVDIPEGVFYDEIDGYNLYVKHKNRKTGMLYDVLIYNFE 183 Query: 180 DT-QTHKIYYAQSGSIDLDRQ----AIILNDGEV---------------HRKSPISKDIS 219 + +I + SG +++ + L GE +R+ + + Sbjct: 184 KGFENAQIIKSDSGRLEMTADKQHLYLHLYSGEQFENLKSQNMNQRNVPYRRETFREKHA 243 Query: 220 IMKFKSYTLQTESANSSTIVLKANDQNLSF-------LLNPNPNNPNYRPELLETYRS 270 I++F S A + + D + L N + Y+ + TY+ Sbjct: 244 IIEFNS-DFNMVDAGIMSNQSNSKDMRMLQADIDSMKLQNDSVGRGYYKEAMAGTYKV 300 >gi|240079726|ref|ZP_04724269.1| hypothetical protein NgonF_00194 [Neisseria gonorrhoeae FA19] gi|268595872|ref|ZP_06130039.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|293399674|ref|ZP_06643826.1| hypothetical protein NGNG_01869 [Neisseria gonorrhoeae F62] gi|268549660|gb|EEZ44679.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|291609925|gb|EFF39048.1| hypothetical protein NGNG_01869 [Neisseria gonorrhoeae F62] Length = 356 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 50/365 (13%), Positives = 122/365 (33%), Gaps = 16/365 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +IL + + + +L + +P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGKGSYGIWEMLGYTALKMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + +EL +I +G S L+ + + +I Sbjct: 61 AYELMPLAVLIGGLASLSQLAAGSELAVIKASGMSTKKLLLILSQFGFIFAIAAVALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A A + L+ + + + I + P++TL GI I D Sbjct: 121 VAPTLSQKAENIKAAAINGKISTGNT-GLWLK-EKNSIINVRGMLPDHTLLGIKIWARND 178 Query: 181 TQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + A S ++ D L + + S +++ + ++ Sbjct: 179 KNELAEAVEADSAVLNSDGS-WQLKNIRRSIMGTDKIETSAAAEETWPIAVRRNLMDVLL 237 Query: 240 LKANDQNLSFL---LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 +K + ++ L + NN + + Y + ++L + + L++ Sbjct: 238 VKPDQMSVGELTTYIRHLQNNS----QNTQIYAIAWWRKLVYPVAAWVMALVAFAF--TP 291 Query: 297 ALVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 R +F + + F + P+ L F + +++L+ Sbjct: 292 QTTRHGNMGLKLFGGICLGLLFHLAGRLFGFTSQLYGTPPFLAGALPTIAFALLAVWLIR 351 Query: 354 IKKKY 358 ++K Sbjct: 352 KQEKR 356 >gi|260221416|emb|CBA29957.1| hypothetical protein Csp_A14750 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 384 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 52/373 (13%), Positives = 135/373 (36%), Gaps = 21/373 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQI---LQRINLVSSSTESLNILLKISGYLI 57 MK+ + + + + L + + + + LQ ++ ++SS + L +I Sbjct: 17 MKTLRKLLYGEVITAVTLVTLGFMALFFFFDVVEELQSVSRIASSGYQVPQALIYVALMI 76 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 P + + P + T V+ + R++E I+ +G ++ +L L + +F F Sbjct: 77 PAHVYELFPITVLIGTIFVMARLARSSEFTILRTSGLGPWRALRTLLALGLGFVLFTFAV 136 Query: 118 ENIIEPKCRSTIK----QLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI 173 + + P T + + K + T ++L+E + + + + + TL+ + Sbjct: 137 GDYVAPLADKTAQLLKSRFQGKISVGKTGAWLKE---RQAYGSYSVNVGALSSDATLKDV 193 Query: 174 FIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDIS---IMKFKSYT--L 228 + + + D ++ +L G + +S + F+S+ Sbjct: 194 RVYEFDNQGKVVSLTEAKAGTFGDDESWMLTQGVRTEFTSGPDQVSKVDRVAFESFRWPT 253 Query: 229 QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 Q + + VL+ L + N + + Y +F K++ L ++ ++ Sbjct: 254 QISAEMVAAAVLRPERMGTIDLF-QYIRHLNANGQSAQKYEIQFWKKVFYPLSCLVMVVL 312 Query: 289 SIVAADK--RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--F 344 S+ A R+ + +S + + + + P+ L + F Sbjct: 313 SLPFAYLHFRSGSIAGYTFGGVMAGISFVL-LNNVLNDLGNLQGWQPWITAALPGLIYSF 371 Query: 345 CISSIFLLMIKKK 357 + F ++ ++ Sbjct: 372 FSLAAFTWLVLRR 384 >gi|16125408|ref|NP_419972.1| hypothetical protein CC_1156 [Caulobacter crescentus CB15] gi|221234151|ref|YP_002516587.1| hypothetical protein CCNA_01214 [Caulobacter crescentus NA1000] gi|13422474|gb|AAK23140.1| hypothetical protein CC_1156 [Caulobacter crescentus CB15] gi|220963323|gb|ACL94679.1| hypothetical membrane spanning protein [Caulobacter crescentus NA1000] Length = 406 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 56/354 (15%), Positives = 121/354 (34%), Gaps = 17/354 (4%) Query: 17 LMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNV 76 V + +IL+ ++++S S+ + +++ L+P L + P F + V Sbjct: 27 AACLGVTVIALLLERILRLLDVLSQSSARFGYVAQLAANLVPHYLGLALPVAFFVALFIV 86 Query: 77 LTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKA 136 + ++ +E+ + +G S + P + + +LLS+F I ++P R + + A Sbjct: 87 IVKLSDGSEIDALLASGQSLERIAAPFVAVGVLLSVFSIIVFGYMQPYSRYAYRAVMHAA 146 Query: 137 QLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDL 196 A L F L S L +FI +I A S + + Sbjct: 147 VNAGWNGRLAGGAFIDDKGSLLTADSADIAGQRLTRVFIRRLDAKGQEEIITAASADLKM 206 Query: 197 DRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS----TIVLKANDQNLS 248 D + L DG + F S T QT + ++ + + Sbjct: 207 DPDGKTITMDLRDGRRI-AHDAYGTYRNLAFTSLTTQTPLSAAAVLLRDRGGDERELTMG 265 Query: 249 FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPI 308 L + + T SEF+ RL + F + ++A ++ + + Sbjct: 266 ELRREAKSPDPVVSK--GTLLSEFYGRLARAAF---LPFLPLLAFPLGLASKRGNRAPGL 320 Query: 309 FISLSISFGV---FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYT 359 ++ + + + + + + LF S++L + + Sbjct: 321 IMAGLLLLAFQHSLLLGQGMAKAGKADAFAAIWIPFTLFAALSVWLFVGSRTRP 374 >gi|153834586|ref|ZP_01987253.1| permease YjgP/YjgQ family protein [Vibrio harveyi HY01] gi|148869029|gb|EDL68074.1| permease YjgP/YjgQ family protein [Vibrio harveyi HY01] Length = 356 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 57/357 (15%), Positives = 131/357 (36%), Gaps = 7/357 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +LYI R I + + V ++ +I+ ++++ V L L IP + Sbjct: 3 KLLDLYIGRTIISTTALVLATFVGLSGIIKYVEQLRKVGRGAYDLMHALYFVLLSIPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++ + VL A+ L + + Sbjct: 63 EMFFPMAALLGALIGLGMLASSSELVVMQAAGFSKLDIGLSVLKTAVPLMLIVMTLGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + L A A + + ++ R +D +I I K + D Sbjct: 123 APEAQKMARDLRAFALSGGSIVSVRAGVWARDAND-FIFIGKVEDDKLYGLNMWRFDEDK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + K+ +A+ D ++ ++ ++ + + + +K Sbjct: 182 KLDKVIFAEEVDYQQDNNWLMRYVQVTDMENENVITKRDVEQMEWHTSLAPDKLAVVTVK 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADKRALV 299 + +LS L + + Y F ++L+Q L + L++ V R++ Sbjct: 242 PEELSLSGLYD-YVTYLKASEQDASRYELAFWRKLSQPLSIAVMMLMALSFVFGPLRSVT 300 Query: 300 RQRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + + + F+G +++ I P + + +F ++ LL K Sbjct: 301 MGARVLSGVVAGFTFYISSEFFGPLTLVYGIP--PVFGALAPSLVFLAIAVSLLRRK 355 >gi|194097860|ref|YP_002000905.1| hypothetical protein NGK_0280 [Neisseria gonorrhoeae NCCP11945] gi|239998341|ref|ZP_04718265.1| hypothetical protein Ngon3_02528 [Neisseria gonorrhoeae 35/02] gi|240016934|ref|ZP_04723474.1| hypothetical protein NgonFA_07156 [Neisseria gonorrhoeae FA6140] gi|240117143|ref|ZP_04731205.1| hypothetical protein NgonPID_01565 [Neisseria gonorrhoeae PID1] gi|240127074|ref|ZP_04739735.1| hypothetical protein NgonS_00193 [Neisseria gonorrhoeae SK-93-1035] gi|268594203|ref|ZP_06128370.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268602831|ref|ZP_06136998.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] gi|268685429|ref|ZP_06152291.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035] gi|193933150|gb|ACF28974.1| Conserved hypothetical integral membrane protein [Neisseria gonorrhoeae NCCP11945] gi|268547592|gb|EEZ43010.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268586962|gb|EEZ51638.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] gi|268625713|gb|EEZ58113.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035] gi|317163630|gb|ADV07171.1| hypothetical protein NGTW08_0197 [Neisseria gonorrhoeae TCDC-NG08107] Length = 356 Score = 109 bits (272), Expect = 9e-22, Method: Composition-based stats. Identities = 52/372 (13%), Positives = 122/372 (32%), Gaps = 28/372 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +IL + + + +L + +P Sbjct: 1 MNLISRYIIRQMAVMAVCALLAFLALYSFFEILYETGNLGKGSYGIWEMLGYTALKMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + +EL +I +G S L+ + + +I Sbjct: 61 AYELMPLAVLIGGLASLSQLAAGSELAVIKASGMSTKKLLLILSQFGFIFAIAAVALGEW 120 Query: 121 IEPKCRSTIKQLSA-----KAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI 175 + P + + A K T +L+E + I + P++TL GI I Sbjct: 121 VAPTLSQKAENIKAAAINGKISTGHTGLWLKEK-------NSIINVRGMLPDHTLLGIKI 173 Query: 176 VDSRDTQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 D + A S ++ D L + + S +++ + Sbjct: 174 WARNDKNELAEAVEADSAVLNSDGS-WQLKNIRRSIMGTDKIETSAAAEETWPIAVRRNL 232 Query: 235 SSTIVLKANDQNLSFL---LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 +++K + ++ L + NN + + Y + ++L + + L++ Sbjct: 233 MDVLLVKPDQMSVGELTTYIRHLQNNS----QNTQIYAIAWWRKLVYPVAAWVMALVAFA 288 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISS 348 R +F + + F + P+ L F + + Sbjct: 289 F--TPQTTRHGNMGLKLFGGICLGLLFHLAGRLFGFTSQLYGTPPFLAGALPTIAFALLA 346 Query: 349 IFLLMIKKKYTK 360 + +I+K+ + Sbjct: 347 V--WLIRKQEKR 356 >gi|209694121|ref|YP_002262049.1| putative permease [Aliivibrio salmonicida LFI1238] gi|208008072|emb|CAQ78213.1| putative permease [Aliivibrio salmonicida LFI1238] Length = 358 Score = 109 bits (272), Expect = 9e-22, Method: Composition-based stats. Identities = 59/359 (16%), Positives = 139/359 (38%), Gaps = 9/359 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I + + + +V ++ +I+ ++++ V T L L +P + Sbjct: 3 KILDWYIGRTIIATSSLCLVTLVGLSSIIKYVEQLRKVGKGTYDLLDALYFVILSMPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++ + VL AI L + + Sbjct: 63 EMFFPMAALLGALIGLGMLAASSELVVMQAAGYSKLDIGISVLKTAIPLMLMVMALGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SRD 180 P+ + + L A + + + ++ + +D +I +S+ + L G+ + ++ Sbjct: 123 APQAQKMARDLRAFSISGGNIASMRTGVWAKDGND-FIYLSRVDDQAKLYGVTLWQFDKE 181 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--STI 238 + I +A+ + + L D + + I+ K S + T + + Sbjct: 182 RKLDDIVFAKKAEYESKEEGWKLIDVSITDMKDEN-IITEKKLDSLSWSTTLTPDKLAVV 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADKR 296 +K +Q+L+ L + N Y F ++ Q + + L++ V R Sbjct: 241 SVKPEEQSLTGLYD-YVNYLKDSELDASRYELAFWRKALQPISVAVMMLLALSFVFGPLR 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 ++ + + + S F + +P + + F+F + ++ LL K Sbjct: 300 SVTMGARILSGVIAGFSFYISNEV-FGPMTLVYNIHPIFGALGPSFVFLLITLGLLNRK 357 >gi|149200566|ref|ZP_01877574.1| putative permease, YjgP/YjgQ family protein [Lentisphaera araneosa HTCC2155] gi|149136338|gb|EDM24783.1| putative permease, YjgP/YjgQ family protein [Lentisphaera araneosa HTCC2155] Length = 329 Score = 109 bits (272), Expect = 9e-22, Method: Composition-based stats. Identities = 57/328 (17%), Positives = 110/328 (33%), Gaps = 33/328 (10%) Query: 55 YLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFL 114 L+P +L P + T V + M+ E+ + +G S ++ P + LA++ S L Sbjct: 1 MLLPKILAYAIPIASLVSVTLVFSRMSAENEITAMRASGISLWQIVNPAILLALVSSACL 60 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF 174 F P +T K + L+ ++L L L ++I + + TL+ + Sbjct: 61 FYLNMFAVPHLEATRKSMMKGELLSNPSTFLRGGTTIDLGK-LSVEIGEKKEDGTLKDLR 119 Query: 175 I--VDSRDTQTHKIYYAQSGSIDLDR---------QAIILNDGEVHRKSPISKDISI--- 220 + VD AQSG I IIL++ K+ ++ S+ Sbjct: 120 VIEVDKATDIVSNQLLAQSGKIINTTENSFTIEFIDVIILDNNWEFLKNDKGENKSLSGV 179 Query: 221 ---------MKFKSYT---LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETY 268 + YT L + + L + + N Sbjct: 180 KVTRLPNANTTYTFYTNDELNSGNLRKRAKYLNIKEMIARLAVLKNKEQTKTVRREHTDL 239 Query: 269 RSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHK 328 +K L P+ F L+++ R I + + + ++ I Sbjct: 240 LYNLNKNLALSFSPLAFLLMALPFGL--RSSRSETSIGLLISLIVMM--TYYATILITGA 295 Query: 329 IEQNPYYIP--ILYLFLFCISSIFLLMI 354 +++ P +++L S+ L MI Sbjct: 296 FDKHTAMHPEILVWLPNIIFQSLGLGMI 323 >gi|55980366|ref|YP_143663.1| hypothetical protein TTHA0397 [Thermus thermophilus HB8] gi|55771779|dbj|BAD70220.1| conserved hypothetical protein [Thermus thermophilus HB8] Length = 347 Score = 109 bits (272), Expect = 9e-22, Method: Composition-based stats. Identities = 53/357 (14%), Positives = 119/357 (33%), Gaps = 10/357 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ + Y+LR F L IV + + + + + + LL+ + P Sbjct: 1 MKTLDRYLLRETLPLFGGGLLVIVLLFLGGAVYEVLAPLVAKGADPYTLLRYLLFRTPEA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + +L+ + + EL + G R L+ P L L +++ F+ Sbjct: 61 LARGAPVAYLFALLVLLSRLGEDAELKALLALGVRRERLLLPFLLLGTAIALAAFLLGEG 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ + + L + L + L F+ + + K G V SR+ Sbjct: 121 LVPQALAKGQDLLRREVLERPRALLTPGATFQDAQGRVVYVGKV--EGEAIGALRVLSRE 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + A+ GS + + +G ++ +F+ L + Sbjct: 179 E----VLLAERGSFRGG--VLHVEEGTRITYEGSRPR-TLARFQRGELVLKDLTFDPWQN 231 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 AN L+ L + +++R + L +F L ++ A Sbjct: 232 PANRMTLAEL-RKEVQRLRQMGVRAGLEATTYYRRFAEPLAAPVFALFAVGLAFYLLGGS 290 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + + + + + + + +P+ L+ +FL + ++ Sbjct: 291 RSLGLVGVAVLTFFYYATWSVGRIMGEQNALDPFLAAFGPNLLYGALGLFLFLGGRR 347 >gi|91228858|ref|ZP_01262763.1| putative permease [Vibrio alginolyticus 12G01] gi|269966357|ref|ZP_06180443.1| Predicted permease [Vibrio alginolyticus 40B] gi|91187596|gb|EAS73923.1| putative permease [Vibrio alginolyticus 12G01] gi|269829034|gb|EEZ83282.1| Predicted permease [Vibrio alginolyticus 40B] Length = 356 Score = 109 bits (272), Expect = 9e-22, Method: Composition-based stats. Identities = 59/357 (16%), Positives = 131/357 (36%), Gaps = 7/357 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +LYI R I + + V ++ +I+ ++++ V L L +P + Sbjct: 3 KILDLYIGRTIISTTALVLATFVGLSGIIKYVEQLRKVGRGVYDLTHALYFVLLSVPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++ + VL A+ L I + Sbjct: 63 EMFFPMAALLGALIGLGMLASSSELVVMQAAGFSKLDIGLSVLKTAVPLMIVVMALGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + L A A + + ++ R +D +I I K + D Sbjct: 123 APEAQKMARDLRAFAISGGSIVSVRSGVWARDAND-FIFIGKVEDDKLYALNMWRFDDDK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 K+ +A+ D ++ ++ ++ + + + +K Sbjct: 182 NLQKVIFAEEVDYQQDNNWLMRYVQITDMENENVISKQDIEQMEWHTSLAPDKLAVVTVK 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADKRALV 299 + +LS L + + Y F ++LTQ L + L++ V R++ Sbjct: 242 PEELSLSGLYD-YVTYLKASEQDASRYELAFWRKLTQPLSIAVMMLMALSFVFGPLRSVT 300 Query: 300 RQRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + + + F+G +++ I +P + + +F +I LL K Sbjct: 301 MGARVLSGVVAGFTFYISSEFFGPLSLVYGI--SPVFGALAPSLVFLAIAIALLRRK 355 >gi|332991779|gb|AEF01834.1| lipopolysaccharide ABC transporter permease [Alteromonas sp. SN2] Length = 353 Score = 109 bits (272), Expect = 9e-22, Method: Composition-based stats. Identities = 57/354 (16%), Positives = 137/354 (38%), Gaps = 8/354 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +LYI R + + ++ ++ ++ +I+ ++++ V + + +P L Sbjct: 3 KILDLYIARTLLGTVTVTLSVLIGLSALIKFVEQLRKVGEGDYDMMVAFLYVVLSLPRDL 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + + + N+EL+++ G SR +I + A ++ + + + Sbjct: 63 EQFFPMATLLGGLIGMGVLASNSELVVMQAAGMSRWNIIVSTMKSATIMILLVMAVGEWV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SRD 180 P S K++ +A + E+ ++ + + ++ I + ++L+ I I D + D Sbjct: 123 TPFSESKAKEIRTEAISGGSLFSSEQLVWAKDGE-HFVSIGEVLSRDSLKDINIFDFNDD 181 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 I YA+SG + D L+D +V R S + + K + + + Sbjct: 182 LSLESITYAKSG--NFDGSEWRLSDVDVTRFSETAVTLDNEKSMQWNSTLTPDKLGIVAV 239 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADKRAL 298 K ++S LL+ + Y +++ Q + + L++ + R++ Sbjct: 240 KPEALSISGLLD-YVGYLANNGQDPSRYELALWRKILQPVSVGVMLLMALSFIFGPLRSV 298 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 + I + F + F + + P+ +L LF + +L Sbjct: 299 TMGARVIMGVLTGFGF-FILNEVFGPLSLVYQIPPFLGALLPSLLFAAIAAIML 351 >gi|163756243|ref|ZP_02163358.1| hypothetical protein KAOT1_06887 [Kordia algicida OT-1] gi|161323855|gb|EDP95189.1| hypothetical protein KAOT1_06887 [Kordia algicida OT-1] Length = 359 Score = 109 bits (272), Expect = 9e-22, Method: Composition-based stats. Identities = 58/374 (15%), Positives = 139/374 (37%), Gaps = 32/374 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI++ +F + L V I ++ I + I+ + +S + ++ + Sbjct: 1 MKILDWYIIKKYLLTFSVMLLLFVPIGIMVDISENIDKMLASKAPTDEIVLYYVNFVIYF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + + + +TE++ I ++G S + ++P L A +++I F+ Sbjct: 61 ANLLFPIFLFLSVIWFTSKLANDTEIIAILSSGVSYLRFLRPFLVAASIVAIVAFVMGMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + + Y+++ ++ D+L I + F DS+ Sbjct: 121 IVPNASKGFNEFRFE--------YIKKGR-KKVRDNLEIYKQVTENDFIYLKSFSFDSKR 171 Query: 181 TQTHKI-----------YYAQSGSIDLDRQAIILNDGEVHRKSPISKD--ISIMKFKSYT 227 + A+S + D L G R D ++ KF + Sbjct: 172 GDNFTLEHFEDNVLEYKIQARSIKYNEDDSTYTLR-GFKKRIVGAMNDSLVNQRKFDT-I 229 Query: 228 LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGL 287 E + + + A N L + + +KR + + I + Sbjct: 230 FPFEVDDLTPVTYMAETLNYQELDKFIAKEKQSGSPNVNKHLLVKYKRWSLPITAFILTI 289 Query: 288 ISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF----L 343 I++ ++ R+ + ++I+F ++ F I + + + P+L ++ + Sbjct: 290 IAVAV---SSMKRRGGMGFNLAFGIAIAF-IYIFFDKIFGTMAEKSGFSPMLAVWVPNLV 345 Query: 344 FCISSIFLLMIKKK 357 F + +++LL ++ Sbjct: 346 FGVLALYLLYNARR 359 >gi|46198337|ref|YP_004004.1| hypothetical protein TTC0029 [Thermus thermophilus HB27] gi|46195959|gb|AAS80377.1| hypothetical membrane spanning protein [Thermus thermophilus HB27] Length = 347 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 53/357 (14%), Positives = 119/357 (33%), Gaps = 10/357 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ + Y+LR F L IV + + + + + + LL+ + P Sbjct: 1 MKTLDRYLLREALPLFGGGLLVIVLLFLGGAVYEVLAPLVAKGADPYTLLRYLLFRTPEA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + +L+ + + EL + G R L+ P L L +++ F+ Sbjct: 61 LARGAPVAYLFALLVLLSRLGEDAELKALLALGVRRERLLLPFLLLGTAIALAAFLLGEG 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ + + L + L + L F+ + + K G V SR+ Sbjct: 121 LVPQALAQGQDLLRREVLERPRALLTPGATFQDAQGRVVYVGKV--EGEAIGALRVLSRE 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + A+ GS + + +G ++ +F+ L + Sbjct: 179 E----VLLAERGSFRGG--VLHVEEGTRITYEGSRPR-TLARFQRGELVLKDLTFDPWQN 231 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 AN L+ L + +++R + L +F L ++ A Sbjct: 232 PANRMTLAEL-RKEVQRLRQMGVRAGLEATTYYRRFAEPLAAPVFALFAVGLAFYLLGGS 290 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + + + + + + + +P+ L+ +FL + ++ Sbjct: 291 RSLGLVGVAVLTFFYYATWSVGRIMGEQNALDPFLAAFGPNLLYGALGLFLFLGGRR 347 >gi|251792101|ref|YP_003006821.1| permease [Aggregatibacter aphrophilus NJ8700] gi|247533488|gb|ACS96734.1| conserved permease [Aggregatibacter aphrophilus NJ8700] Length = 355 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 46/361 (12%), Positives = 134/361 (37%), Gaps = 10/361 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + E YI + I + + L +V ++ +I+ +++ V T + + + +P Sbjct: 1 MNTLERYIGKSILGTIFATLLMLVGLSAIIKFVEQFRSVGKGTYDIWQAIAYTVLTMPKD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ +EL+++ ++G SR+ + V+ I L + I Sbjct: 61 VETFFPMAALLGALIALGNLASRSELVVMQSSGFSRMRIGLAVMKTTIPLVLLTMIIGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SR 179 P+ + + +KA + ++ ++ + ++ ++ + + + L+ I+I + Sbjct: 121 GIPQTEQFARDMRSKAISGGSMLSVKNGIWAKDGNN-FVYVRNISDDVELRDIYIYTFNE 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + K+ +A + + + + + + ++ + + + Sbjct: 180 QRRLEKLKHANHAAFNDGKWMLKQVNESTIQPDSVNTVNRLNE--EWQTNLTPDKLGVAS 237 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L+ ++S L + + + + + ++L Q + + ++++ + Sbjct: 238 LRPTSLSISGLSS-YITFLKETGQDSKNFELTYWRKLFQPISVGVMMMLALSFIFGP--L 294 Query: 300 RQRKKIHPIFISLSISFGVFW---GFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R I I + F + F P ++ LF + +LL K+ Sbjct: 295 RSVTAGARILIGICFGFLFYVVNELFGKFSLVYNTTPLIGALMPSMLFLAITWWLLARKR 354 Query: 357 K 357 Sbjct: 355 S 355 >gi|240113704|ref|ZP_04728194.1| hypothetical protein NgonM_09087 [Neisseria gonorrhoeae MS11] gi|240116445|ref|ZP_04730507.1| hypothetical protein NgonPID1_09468 [Neisseria gonorrhoeae PID18] gi|240122359|ref|ZP_04735315.1| hypothetical protein NgonP_00180 [Neisseria gonorrhoeae PID332] gi|240125093|ref|ZP_04737979.1| hypothetical protein NgonSK_02542 [Neisseria gonorrhoeae SK-92-679] gi|254494458|ref|ZP_05107629.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291] gi|260441667|ref|ZP_05795483.1| hypothetical protein NgonDG_11387 [Neisseria gonorrhoeae DGI2] gi|268599772|ref|ZP_06133939.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11] gi|268602117|ref|ZP_06136284.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18] gi|268680946|ref|ZP_06147808.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332] gi|268683688|ref|ZP_06150550.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679] gi|291045047|ref|ZP_06570755.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|226513498|gb|EEH62843.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291] gi|268583903|gb|EEZ48579.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11] gi|268586248|gb|EEZ50924.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18] gi|268621230|gb|EEZ53630.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332] gi|268623972|gb|EEZ56372.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679] gi|291011050|gb|EFE03047.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] Length = 356 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 52/372 (13%), Positives = 122/372 (32%), Gaps = 28/372 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +IL + + + +L + +P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGKGSYGIWEMLGYTALKMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + +EL +I +G S L+ + + +I Sbjct: 61 AYELMPLAVLIGGLASLSQLAAGSELAVIKASGMSTKKLLLILSQFGFIFAIAAVALGEW 120 Query: 121 IEPKCRSTIKQLSA-----KAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI 175 + P + + A K T +L+E + I + P++TL GI I Sbjct: 121 VAPTLSQKAENIKAAAINGKISTGHTGLWLKEK-------NSIINVRGMLPDHTLLGIKI 173 Query: 176 VDSRDTQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 D + A S ++ D L + + S +++ + Sbjct: 174 WARNDKNELAEAVEADSAVLNSDGS-WQLKNIRRSIMGTDKIETSAAAEETWPIAVRRNL 232 Query: 235 SSTIVLKANDQNLSFL---LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 +++K + ++ L + NN + + Y + ++L + + L++ Sbjct: 233 MDVLLVKPDQMSVGELTTYIRHLQNNS----QNTQIYAIAWWRKLVYPVAAWVMALVAFA 288 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISS 348 R +F + + F + P+ L F + + Sbjct: 289 F--TPQTTRHGNMGLKLFGGICLGLLFHLAGRLFGFTSQLYGTPPFLAGALPTIAFALLA 346 Query: 349 IFLLMIKKKYTK 360 + +I+K+ + Sbjct: 347 V--WLIRKQEKR 356 >gi|189219653|ref|YP_001940294.1| permease [Methylacidiphilum infernorum V4] gi|189186511|gb|ACD83696.1| Predicted permease [Methylacidiphilum infernorum V4] Length = 395 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 50/358 (13%), Positives = 120/358 (33%), Gaps = 14/358 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K Y+ + L + + + + + + + + + +P V+ Sbjct: 28 KILFRYLFKGFLFPLLFTIVAFCSLVIIADLFGSLEDFIQNKATPGQIFHYYLAYLPAVI 87 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M+ P + L ++R+ EL+ + G + P L + +L+++FL + + Sbjct: 88 IMIVPPASLFSSLYFLMQLHRHGELIAMQACGVPLQKIFTPFLIIGVLVTLFLAALQ--L 145 Query: 122 EPKCRSTIK--QLSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYN---PNNTLQGIFI 175 P S K Q+ + T + + ++ + + I + + + + Sbjct: 146 GPGGNSQAKRDQILEDIKGNKTAVHALRGIIYKEEAEKRIWYFRQLDFIKNQGEDVEVVV 205 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL---QTES 232 ++ K Y+A+ + + I + + + F++ L T Sbjct: 206 QENSGKDLKK-YFARKAAWKDNH--WIFYEVNRIDYDSANNFLQSTYFETLPLVSWNTPP 262 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + K D N S L + + LL Y+ +F+ + + L ++ LI + Sbjct: 263 RQMVALEKKPRDLNASELWKLINKPRSIQKTLLAPYQVQFYTLVAEPLTILVLLLIGLAE 322 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 + + + L + +F F + P L F + S+F Sbjct: 323 GGRLSSRHPTAGVFNALFILIAFYLIFHFFQILGQGSRIPPAVAIFSPLVAFTLFSLF 380 >gi|238023197|ref|ZP_04603623.1| hypothetical protein GCWU000324_03124 [Kingella oralis ATCC 51147] gi|237865580|gb|EEP66720.1| hypothetical protein GCWU000324_03124 [Kingella oralis ATCC 51147] Length = 355 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 43/350 (12%), Positives = 119/350 (34%), Gaps = 16/350 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+++ + + + I+ + I ++ ++V + +L + + +P Sbjct: 1 MNLITRYLIKRLAVASCYALFAILALYSFIDLISETSVVGQNQYTLWVATQYILMQMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L + N+EL +I +G S +I ++ + + +I + Sbjct: 61 AYQLMPLATLIGGLVALNQLANNSELAVIKTSGLSTANIIGIIIKFSAIFAIATVLLGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI-VDSR 179 + P+ ++ A A+ + ++ + I ++ P+NTL GI I + Sbjct: 121 LAPELSRRGDEMKANARAGHIAAA-HNGIWIK-QPGSMINVASMLPDNTLVGIKIWHYND 178 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 Q + A+ ++ A L++ + + + + ++ Sbjct: 179 QFQLTEAISAEKATVANG--AWQLHNTHSTTLADNHAQPQQQAEREWQTDIGKPLLNVLL 236 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 +K + + L + + Y + +L + ++ L+++ Sbjct: 237 VKPEQMSFTAL-TQYIRYLKENHQQTQAYDVAWWNKLIYPIATMVMALVALAFTPN---- 291 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 + + + L + F + + LY +S+I Sbjct: 292 --SGRHSNMGLKLFGGICLGLLFFFTGRLFG----FTTQLYGVPAMLSAI 335 >gi|50083533|ref|YP_045043.1| hypothetical protein ACIAD0255 [Acinetobacter sp. ADP1] gi|49529509|emb|CAG67221.1| conserved hypothetical protein; putative permease [Acinetobacter sp. ADP1] Length = 356 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 51/359 (14%), Positives = 139/359 (38%), Gaps = 11/359 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + ++ + + L + + +V + + L ++ + + + L + P L Sbjct: 5 RIVAKHVTKTTALAMLGTTIVLVILQVLFTYLGELSNLKADYSAWQAFL-YVLWGAPRYL 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ N+EL+++ + G S ++ V+ A++L + F + Sbjct: 64 YEILPISALIGAILGLGTLASNSELIVMRSVGISLWRIVGWVIRSALVLVLLSFALSEWV 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + K+ ++ + R + +I + N L+ I +VD D Sbjct: 124 VPYTNERANSV--KSHQSVAALGEVRGYWSR-EGQRFIYVDYANSQGQLKRIQVVDFDDN 180 Query: 182 -QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + A+ G D Q ++ + ++ + ++ + ++L + + + Sbjct: 181 YRLKSVTNAEQGQFVKDGQWLLNHSQQMAIQGQGDAVLANAAKQPFSLALQPKYVHMVTI 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 D + S L++ N ++ +TY+ F K++ + L++ +R Sbjct: 241 DPEDLSFSQLVS-FMNYMREYSQVPKTYQLAFWKKVASPFALITLVLVACSFIFGP--LR 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKI---EQNPYYIPILYLFLFCISSIFLLMIKK 356 Q+ + I+L I G ++ ++ + +P + + + L ++ +LL + Sbjct: 298 QQSMGFRLVIALFIGLGFYYLQDFLGYASLVYNPSPAWFVLGPIVLMFVAGSYLLYRAR 356 >gi|319900104|ref|YP_004159832.1| permease YjgP/YjgQ family protein [Bacteroides helcogenes P 36-108] gi|319415135|gb|ADV42246.1| permease YjgP/YjgQ family protein [Bacteroides helcogenes P 36-108] Length = 633 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 87/208 (41%), Gaps = 4/208 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K ++++L+ F+ + +FI + + + ++ + + +L + Y T+ Sbjct: 4 IKKLDIFVLKSFCMLFMGTFFICLFIFMMQFLWRYVDELIGKGLEMTVLAQFFFYSALTL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+ P + + ELL + G S + +++ ++ L+S F +N+ Sbjct: 64 VPVSLPLAILLAALITFGNFGERFELLAMKAAGISLLKIMRSLIVFIALVSCVSFYFQNV 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 I P+ ++ + L + + E +F+ + + + + L + I + Sbjct: 124 IGPQAQTKLWTLLLSMKQKSPEVDIPEGVFYDEIEGYNLYVKHKDRKTGMLYDVLIYNFE 183 Query: 180 DT-QTHKIYYAQSGSID--LDRQAIILN 204 + +I A SG ++ D+Q + L+ Sbjct: 184 KGFENAQIIKADSGKLEMTADKQHLYLH 211 >gi|119899192|ref|YP_934405.1| integral membrane protein [Azoarcus sp. BH72] gi|119671605|emb|CAL95518.1| probable integral membrane protein [Azoarcus sp. BH72] Length = 358 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 45/363 (12%), Positives = 126/363 (34%), Gaps = 13/363 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K Y+ + I + + + + + ++ V L + ++P + Sbjct: 3 KILSRYLAKEIFGATATVLVAFLGLFAFFDFINELDSVGKDGYQLYQAVIYVAMIVPGRV 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + + LT++ R++E+ ++ +G S +++ + + + + F+ I Sbjct: 63 YELLPIAVLIGSLYALTTLARHSEITVMRASGLSTWRMLRILGLIGSVFVVLTFVFGEYI 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P S +Q A + L L+ + D I + P+ +++ + I + Sbjct: 123 APPAESAAQQWRLVATNSAVSQQLRSGLWVK-DGAQVINVRTLRPDRSMEHVRIYAFNEH 181 Query: 182 -QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL--QTESANSSTI 238 I A +G D + Q LN + R + ++++ + + + ++ Sbjct: 182 YGLESISEAATGVYDGEGQ-WRLNGIQRTRFTDER---TVLEHEDSIIWRSELTPEVLSV 237 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 ++ ++ L + + + Y K+L ++ +++ A Sbjct: 238 LMVVPERMSVANLWAYVRHLRENRQNADRYEIALWKKLVYPFAVLVMLALALPFAFT--H 295 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN---PYYIPILYLFLFCISSIFLLMIK 355 R +F+ + + G + N P + +F ++ +L Sbjct: 296 DRMGGVSVKVFLGVMLGIGFHLLNGLASNLGVINAWPPVLAALTPSLVFLATAAVMLYSV 355 Query: 356 KKY 358 ++ Sbjct: 356 ERR 358 >gi|307721207|ref|YP_003892347.1| permease YjgP/YjgQ family protein [Sulfurimonas autotrophica DSM 16294] gi|306979300|gb|ADN09335.1| permease YjgP/YjgQ family protein [Sulfurimonas autotrophica DSM 16294] Length = 340 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 48/250 (19%), Positives = 99/250 (39%), Gaps = 5/250 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + YIL F+ L + IA VI +++ + S+ + K+ +++P + Sbjct: 1 MQRLQKYILNNFSALFMSIFLPLFVIASVIFLIKLSTYTAVIQLSIWEMGKLYLFVLPEI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P F + T L ++ + E+++I G ++K A +LS+ L + Sbjct: 61 LFYTLPITFFIAATLSLFKLSNDNEIIVIFALGIEPGFIVKTFFKPAFILSLLLAFDFLV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P K + + F+ L + F D + I + + + T +F+ + + Sbjct: 121 VSPHTTVLSKNFLSYKKSEAKFN-LAASEFGNSFGDWLLYIGEKDKDGTFSKVFLFNKKQ 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILN--DGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + A+ ++ D + L DGE + S + S + FK+ + T Sbjct: 180 ENEEILIAAKRATVINDAGILRLKLMDGEGYSYS--TNKFSQVNFKAMLINDTLKADLTT 237 Query: 239 VLKANDQNLS 248 + LS Sbjct: 238 YKQPLQYWLS 247 >gi|113971160|ref|YP_734953.1| permease YjgP/YjgQ family protein [Shewanella sp. MR-4] gi|113885844|gb|ABI39896.1| permease YjgP/YjgQ family protein [Shewanella sp. MR-4] Length = 352 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 55/364 (15%), Positives = 132/364 (36%), Gaps = 21/364 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK +LYI R + + + L + ++ +I+ + ++ LV + S+ +L+P Sbjct: 1 MKILDLYIARVLLSTSALCLLVLTGLSGIIKWVDQLRLVGRGSYSMMDAGIYVLFLVPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + + N+EL+++ +G SR+ + + A+ L + + Sbjct: 61 IEMFFPMAVLLGALIGMGMLASNSELVVMQASGMSRLQITLSAMKTAVPLMLMVMALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SR 179 P +L A +L+ + D DL++ I + + L I + + Sbjct: 121 GAPVAEQKANELQA-IKLSGGSLIKSHRGIWAKDGDLFVNIGEVADIDKLNNITLYKFNS 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + + +A+S D + L D + S + + + S + Sbjct: 180 ELKLTNVVHAKSALFSKD--SWHLMDVKRTDLSYEEVKLEHLDEDIWRSSLTPDKLSVVS 237 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 +K ++ L+ + + Y +++ Q + + L+++ Sbjct: 238 VKPEALSIRGLMG-YLDYLKNNSQDPSRYELALWRKVMQPVTVGVMMLVALSFVFGP--- 293 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHK--------IEQNPYYIPILYLFLFCISSIFL 351 + + + + GV GFS+ I + + P Y+ + L F Sbjct: 294 -----LRTVTMGARVLLGVVAGFSFYISNEIFGPMSMVYELPAYVGAIAPSLLFTGIAFY 348 Query: 352 LMIK 355 + + Sbjct: 349 FIRR 352 >gi|54307699|ref|YP_128719.1| putative permease [Photobacterium profundum SS9] gi|46912122|emb|CAG18917.1| putative permease [Photobacterium profundum SS9] Length = 356 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 63/359 (17%), Positives = 147/359 (40%), Gaps = 11/359 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I + ++ +V ++ +I+ ++++ + T L L +P + Sbjct: 3 KILDWYIGRTIIATTALTLSTLVGLSAIIKYVEQLRKIGDGTYDLWKALIYVLLSMPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++ + VL A+ L + + + Sbjct: 63 EMFFPMAVLLGALIGLGMLASSSELVVMQAAGFSKLDIGLSVLKTAVPLMLIVMVLGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + ++L A ++ ++ + +D +I I + + +TL + I D Sbjct: 123 APQAQKSARELRAIWTSGGNILSVQSGVWAKDGND-FIYIGRVHEQSTLNAVNIWQFDDK 181 Query: 182 QT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--STI 238 T K+ +A+S S ++Q +L D V S I + + KF + +T + + + Sbjct: 182 NTLSKMVFAKSASF-TEQQGWLLADVTVTNISKIQQ--TNTKFDTLPWKTSLSPDKLAIV 238 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADKR 296 ++K + LS + + + + Y F ++L Q + + L++ V R Sbjct: 239 MVKPEELALSGVYD-YVSYLKESKQDASRYELAFWRKLLQPISIAVMMLLALSFVFGPLR 297 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 ++ + + + + F + +P + +F +I+LL K Sbjct: 298 SVTMGARVLSGVIFGFTFYISNEV-FGPMSLVYRLHPAIGALGPSIVFLFITIYLLRRK 355 >gi|323344722|ref|ZP_08084946.1| hypothetical protein HMPREF0663_11482 [Prevotella oralis ATCC 33269] gi|323093992|gb|EFZ36569.1| hypothetical protein HMPREF0663_11482 [Prevotella oralis ATCC 33269] Length = 633 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 85/208 (40%), Gaps = 4/208 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K +++I + G F+ + F+ + + + I+ + S+ ++ + Y + Sbjct: 4 IKKLDIFIAKQFGLLFIGTFFICQFVLMMQFLWKSIDELVGKGLSMEVMAQFFWYAGLML 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P P + + ++ ++EL I G S I + ++ ++I++S F +N Sbjct: 64 VPQALPLAILLSSLIAFGNLGESSELTAIKAAGISLIQAFRSLIIISIIISFSSFYFQNY 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 + P I QL + + E +F+ + + + K + L GI I Sbjct: 124 VGPTANMKIAQLWISMKQKSPELAIPEGIFYDGIPNSNLYVQKKDMETGKLYGIMIYRMT 183 Query: 180 DT-QTHKIYYAQSGSIDLD--RQAIILN 204 + + I A SG + ++ ++L Sbjct: 184 GSYEDQAIILADSGMLQSTAEKKHLVLT 211 >gi|317477113|ref|ZP_07936354.1| hypothetical protein HMPREF1016_03338 [Bacteroides eggerthii 1_2_48FAA] gi|316906656|gb|EFV28369.1| hypothetical protein HMPREF1016_03338 [Bacteroides eggerthii 1_2_48FAA] Length = 635 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 88/208 (42%), Gaps = 4/208 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K +++IL+ F+ + +FI + + + ++ + +N+L + Y T+ Sbjct: 4 IKKLDIFILKSFCLLFMGTFFICLFIFMMQFLWKYVDEMVGKGLEMNVLAQFFFYSALTL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P P + + ELL + G S + +++P++F L+ F +N+ Sbjct: 64 VPASLPLAILLAALITFGNFGERFELLAMKAAGISLLKIMRPLIFFISLICCVSFYFQNV 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 I PK ++ + L + + E +F+ D + + N L + I + Sbjct: 124 IGPKAQTKLWTLLVSMKQKSPEVDIPEGVFYDEIDGYNLYVKHKNRETGMLYDVLIYNFE 183 Query: 180 DT-QTHKIYYAQSGSID--LDRQAIILN 204 + +I + SG ++ D+Q + L+ Sbjct: 184 KGFENAQIIKSDSGRLEMTADKQHLYLH 211 >gi|269103491|ref|ZP_06156188.1| putative membrane protein [Photobacterium damselae subsp. damselae CIP 102761] gi|268163389|gb|EEZ41885.1| putative membrane protein [Photobacterium damselae subsp. damselae CIP 102761] Length = 356 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 54/358 (15%), Positives = 135/358 (37%), Gaps = 8/358 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I + ++ +V ++ +I+ ++++ V T L L +P + Sbjct: 3 KILDWYIGRTIIGTTALTLSTLVGLSAIIKYVEQLRKVGQGTYDLWNALIFVLLSVPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++ + L A+ L + + + Sbjct: 63 EMFFPMAVLLGALIGLGMLASSSELVVMQAAGFSKLDIGLSTLKTAVPLMLMVMLLGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SRD 180 P+ + + L ++ ++ + +D +I I++ + L GI I + + Sbjct: 123 APQAQKAARDLRTFWTSGGNMLSVQSGVWAKDGND-FIYIARVHEQKELDGINIWEFNGK 181 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--STI 238 + + +A+ + ++ L V +PI +I K+ + QT + + Sbjct: 182 NKLTQSVFAEKAQYNAEK-GWSLKYVTVTDFAPI--EIKETKYPTLDWQTTLTPDKLAIV 238 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 +K + +LS + N + Y F ++ Q + + L+++ Sbjct: 239 TVKPEELSLSGVYN-YVQYLKESKQDASRYELAFWRKALQPVSIAVMMLLALSFVFGPLR 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + +F + + ++ + P I L + ++ L+ +K Sbjct: 298 SVTMGARVLSGVIFGFAFYISNEVFGPMSQVYRLPPVIGALAPSMVFLAITIYLLKRK 355 >gi|260886192|ref|ZP_05897457.1| putative permease [Prevotella tannerae ATCC 51259] gi|260850440|gb|EEX70309.1| putative permease [Prevotella tannerae ATCC 51259] Length = 629 Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 68/172 (39%), Gaps = 2/172 (1%) Query: 34 QRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTG 93 + ++ + +++IL + Y+ T++PM P + + +M ELL + G Sbjct: 6 RYVDEIVGKGITMDILGQFYWYMAITMVPMALPLAVLLASLISFGNMGERLELLAMKAAG 65 Query: 94 TSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRL 153 S + +++P+ L I L+ F +N + + L + + E +F+ Sbjct: 66 VSLLRIMRPLAVLVIGLAAVSFYFQNRAALDAQKNLTSLLWSLRETSPALEIPEGVFYGK 125 Query: 154 DDDLYIKISKYN-PNNTLQGIFIVDSRDT-QTHKIYYAQSGSIDLDRQAIIL 203 + + + + + L + I + +I A SG +++ L Sbjct: 126 INSFSLYVERKDVATGKLYNVMIYKTDQGFDKAQIVVADSGRLEVTNDKEHL 177 Score = 37.6 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 43/97 (44%), Gaps = 6/97 (6%) Query: 262 PELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWG 321 + + T+R ++H++ T + + F I A A++R+ P I++ I F ++ Sbjct: 336 DKSVRTHRIQWHQKFTMSIACIFFFFIG---APLGAIIRKGGLGMPTIIAV-ILFIFYYI 391 Query: 322 FSYIIHKIEQNPY--YIPILYLFLFCISSIFLLMIKK 356 + K+ ++ I +++ ++ + + K Sbjct: 392 INTSGMKMARDGAWNMIFGMWISTVVLTPLGCFLTYK 428 >gi|254468723|ref|ZP_05082129.1| permease YjgP/YjgQ [beta proteobacterium KB13] gi|207087533|gb|EDZ64816.1| permease YjgP/YjgQ [beta proteobacterium KB13] Length = 355 Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats. Identities = 60/362 (16%), Positives = 137/362 (37%), Gaps = 24/362 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 YI + + + +VF+ LQ I ++S L+ ++ +P L Sbjct: 2 KLAKYINFEFFINISLVAIGLVFLFAFFDFLQEIGNLNSGKYDLSKIIVFITLSMPGHLY 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + + ++ N+EL+++ +G S + + ++ +++ + F+ N+I Sbjct: 62 EIIPLSCLIGAMFTVGQLSGNSELVVMRTSGMSILQIASSLIIVSLFFGVLTFMVGNLIT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SRDT 181 P +Q+ + + + ++ + ++ ++ I P+ +L+ I I + D Sbjct: 122 PVSEKNAQQIKISSTDGSVTTDFKSGVWMKDGNN-FVNIENVLPDASLRNIHIYEFDNDF 180 Query: 182 QTHKIYYAQSGSIDLD-------RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 I A+ G + +Q+ IL++G + P S++K Sbjct: 181 SLRSIVDAEKGRYENGIWELEKIKQSFILDEGFDVKTLPSGTWKSMIK----------PE 230 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 ++L + D+ F LN N + Y F +++ Q + P+I L ++ Sbjct: 231 MMNVLLISPDRMSIFDLNDFINYLKKNNQKTSRYEVSFWEKIIQPVMPIIMILFAVPFG- 289 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN---PYYIPILYLFLFCISSIFL 351 R K +F+ + S + H N P I+ + +I+L Sbjct: 290 -FFQERSGGKYLKMFLGIIFGIIYQIMNSMMRHIGVLNDWEPIITAIIPSIVILGIAIYL 348 Query: 352 LM 353 + Sbjct: 349 MF 350 >gi|117921443|ref|YP_870635.1| permease YjgP/YjgQ family protein [Shewanella sp. ANA-3] gi|117613775|gb|ABK49229.1| permease YjgP/YjgQ family protein [Shewanella sp. ANA-3] Length = 352 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 54/364 (14%), Positives = 132/364 (36%), Gaps = 21/364 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK +LYI R + + + L + ++ +I+ + ++ LV + ++ +L+P Sbjct: 1 MKILDLYIARVLLSTSALCLLVLTGLSGIIKWVDQLRLVGRGSYTMMDAGIYVLFLVPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + + N+EL+++ +G SR+ + + A+ L + + Sbjct: 61 IEMFFPMAVLLGALIGMGMLASNSELVVMQASGMSRLQITLSAMKTAVPLMLMVMALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SR 179 P +L A +L+ + D DL++ I + + L I + + Sbjct: 121 GAPVAEQKANELQA-IKLSGGSLIKSHRGIWAKDGDLFVNIGEVADIDKLNNITLYKFNS 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + + +A+S D + L D + S + + + S + Sbjct: 180 ELKLTNVVHAKSALFSKD--SWHLMDVKRTDLSYDEVKLEHLDEDIWRSSLTPDKLSVVS 237 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 +K ++ L+ + + Y +++ Q + + L+++ Sbjct: 238 VKPEALSIRGLMG-YLDYLKNNSQDPSRYELALWRKVMQPVTVGVMMLVALSFVFGP--- 293 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHK--------IEQNPYYIPILYLFLFCISSIFL 351 + + + + GV GFS+ I + + P Y+ + L F Sbjct: 294 -----LRTVTMGARVLLGVVAGFSFYISNEIFGPMSMVYELPAYVGAIAPSLLFTGIAFY 348 Query: 352 LMIK 355 + + Sbjct: 349 FIRR 352 >gi|269963273|ref|ZP_06177605.1| Predicted permease [Vibrio harveyi 1DA3] gi|269831988|gb|EEZ86115.1| Predicted permease [Vibrio harveyi 1DA3] Length = 356 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 57/357 (15%), Positives = 130/357 (36%), Gaps = 7/357 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +LYI R I + + V ++ +I+ ++++ V L L IP + Sbjct: 3 KLLDLYIGRTIISTTALVLATFVGLSGIIKYVEQLRKVGRGAYDLMHALYFVLLSIPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++ + VL A+ L + + Sbjct: 63 EMFFPMAALLGALIGLGMLASSSELVVMQAAGFSKLDIGLSVLKTAVPLMLIVMTLGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + L A A + + ++ R +D +I I K + D Sbjct: 123 APEAQKMARDLRAFALSGGSIVSVRAGVWARDAND-FIFIGKVEDDKLYGLNMWRFDEDK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 K+ +A+ D ++ ++ ++ + + + +K Sbjct: 182 NLDKVIFAEEVDYQQDNNWLMRYVQITDMENENVITKRDLEQMEWHTSLAPDKLAVVTVK 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADKRALV 299 + +LS L + + Y F ++L+Q L + L++ V R++ Sbjct: 242 PEELSLSGLYD-YVTYLKASEQDASRYELAFWRKLSQPLSIAVMMLMALSFVFGPLRSVT 300 Query: 300 RQRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + + + F+G +++ I P + + +F ++ LL K Sbjct: 301 MGARVLSGVVAGFTFYISSEFFGPLTLVYGIP--PVFGALAPSLVFLAIAVSLLRRK 355 >gi|217977121|ref|YP_002361268.1| permease YjgP/YjgQ family protein [Methylocella silvestris BL2] gi|217502497|gb|ACK49906.1| permease YjgP/YjgQ family protein [Methylocella silvestris BL2] Length = 380 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 58/367 (15%), Positives = 128/367 (34%), Gaps = 12/367 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + LY+ + IG + L+ + + + Q + + L L + +PTVL Sbjct: 3 RLLTLYLAKRIGVTALLIEAMLCIPLVMTSLFQTLPAAAIRGGLLWPALLGT---LPTVL 59 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + + M+ + + ++ + S +L P L +A + + I Sbjct: 60 YLALPLSVGVAVALEFSRMSSDGMIAVLYSIRLSVWSLCLPALIVAAAAVGAGYALSSYI 119 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNTLQGIFIVD-SR 179 P + + + +L LE F+ D + ++ + G+FI S Sbjct: 120 APSYVGQMHDVIHVIRNSLNHRMLEPAHFYTFDKGARTMFFQRWRSADVAAGMFIYQYSA 179 Query: 180 DTQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + +I A+ + Q I+LN G + ++ + F+ Y L + + Sbjct: 180 EKNEEQIINAEEAEFRRNEQGVVIVLNHGSIQTLPSGAQAMRNANFEQYALPIDMQGAGA 239 Query: 238 IVLKANDQNLSFL----LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + K + + + L + P + SE KR + + L+++ Sbjct: 240 LP-KRDWRGVFELPLGDFFAAIPPERWDPRGYAEWMSEAAKRCFIPILALTHALLAVGLV 298 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 A R L+I + +NP+ I ++ L + + L + Sbjct: 299 LTVAAATGRGSAATTSTVLAIPLIHVAILVGSESIVRENPHLIWLIALAIAAELGLALFL 358 Query: 354 IKKKYTK 360 I ++ + Sbjct: 359 IARRNAR 365 >gi|114048398|ref|YP_738948.1| permease YjgP/YjgQ family protein [Shewanella sp. MR-7] gi|113889840|gb|ABI43891.1| permease YjgP/YjgQ family protein [Shewanella sp. MR-7] Length = 352 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 54/364 (14%), Positives = 132/364 (36%), Gaps = 21/364 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK +LYI R + + + L + ++ +I+ + ++ LV + ++ +L+P Sbjct: 1 MKILDLYIARVLLSTSALCLLVLTGLSGIIKWVDQLRLVGRGSYTMMDAGIYVLFLVPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + + N+EL+++ +G SR+ + + A+ L + + Sbjct: 61 IEMFFPMAVLLGALIGMGMLASNSELVVMQASGMSRLQITLSAMKTAVPLMLMVMALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SR 179 P +L A +L+ + D DL++ I + + L I + + Sbjct: 121 GAPVAEQKANELQA-IKLSGGSLIKSHRGIWAKDGDLFVNIGEVADIDKLNNITLYKFNS 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + + +A+S D + L D + S + + + S + Sbjct: 180 ELKLTNVVHAKSALFSND--SWHLMDVKRTDLSYDEVKLEHLDEDIWRSSLTPDKLSVVS 237 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 +K ++ L+ + + Y +++ Q + + L+++ Sbjct: 238 VKPEALSIRGLMG-YLDYLKNNSQDPSRYELALWRKVMQPVTVGVMMLVALSFVFGP--- 293 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHK--------IEQNPYYIPILYLFLFCISSIFL 351 + + + + GV GFS+ I + + P Y+ + L F Sbjct: 294 -----LRTVTMGARVLLGVVAGFSFYISNEIFGPMSIVYELPAYVGAIAPSLLFTGIAFY 348 Query: 352 LMIK 355 + + Sbjct: 349 FIRR 352 >gi|312131567|ref|YP_003998907.1| permease yjgp/yjgq family protein [Leadbetterella byssophila DSM 17132] gi|311908113|gb|ADQ18554.1| permease YjgP/YjgQ family protein [Leadbetterella byssophila DSM 17132] Length = 360 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 57/366 (15%), Positives = 137/366 (37%), Gaps = 15/366 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 M + Y+++ +++ + IV + VI +++ + + S I L P Sbjct: 1 MTKIDRYLIKRFLTTYVFAVFIIVLVILVIDFVEKNDDFMETKPSNHAIFFDYYLNLAPY 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++P + T M +TE++ I +GTS L+ P + +++I+ F+ Sbjct: 61 WANYISPLMIFISTVFFTAKMASHTEIIAILGSGTSFRRLMLPYFIGSGIVAIYSFVMVG 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDS 178 PK + K F + + + ++Y +S Y+ +NT + Sbjct: 121 WFLPKANVPRIEFENKYIHNDFFFTGRD-IHLAVQKNVYAYLSSYDNSSNTAYDFTLEKV 179 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHR--KSPISKDISIMKFKSYTLQTESANSS 236 + + + A+ + D + L D + + S + +++ ++ Sbjct: 180 ENNRLVEKLSARRATYDDSLKKWKLYDYNIRKIGISKDEMTYEAITPLDTSIKLYPSDFG 239 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + +S L + + E +ETY+ E+++R +I ++ ++ Sbjct: 240 NSKNRQETMTISQLEDYIDLINSRGAEGVETYKIEYYQRFATPFAVIILSIMGLIV---- 295 Query: 297 ALVRQRKKIHPIFISLSISFG-VFWGFSYIIHKIEQNPYYIPILYLFL----FCISSIFL 351 R+ + + I++ ++ F + I + PIL ++L F I S+ + Sbjct: 296 -SARKARGGVGLQIAIGFVLAFLYIIFYILSKGIAEAGSMNPILAVWLPNIVFSIISVVM 354 Query: 352 LMIKKK 357 + Sbjct: 355 YFTVPR 360 >gi|257126590|ref|YP_003164704.1| permease YjgP/YjgQ family protein [Leptotrichia buccalis C-1013-b] gi|257050529|gb|ACV39713.1| permease YjgP/YjgQ family protein [Leptotrichia buccalis C-1013-b] Length = 358 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 58/360 (16%), Positives = 123/360 (34%), Gaps = 13/360 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI+ +SF++ + I + + + + + LK Y IP + Sbjct: 1 MNKLDKYIIVNYVKSFILGMMMFFLIFLLAESITLTGWLMDGKLKGSEALKYLRYGIPEI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + ++ M + E+ + +G S + + + L+S+ +F Sbjct: 61 VTNTAPLGVLLGSLLCISKMAKQLEVAAMKTSGISFARVALFPILFSALVSLGVFWLNYD 120 Query: 121 IEPKCRSTIKQLSA-KAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDS 178 + + + L K ++ +F ++D + N N T+ + I+ Sbjct: 121 YLGRANTKKEDLKTLKIDNKEPVRSEKDFVFVKIDKRTVLFSGHANKNNGTMNYVTILKF 180 Query: 179 RD--TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + K+Y A I+ D + + K + + Sbjct: 181 ENGFKVIRKMYTASFAKINPKTNEWTFKD--LKEYDSKTNVTKPFDTKKFKFVASMEDVL 238 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 +KA + + L + L R EF+ R++ L ++ LI + Sbjct: 239 ASAVKAKNLTMPELREKTVYFTRVGADSLN-LRIEFYYRISFALSSLVMSLIGLSLG--- 294 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R + + I LS+ G + I + +PI Y+ F IFL++ K Sbjct: 295 --SRYVRGGAAVNIGLSVIIGYAYYGVSTILRSMAVSGTVPI-YVACFVPLIIFLVVGIK 351 >gi|33593405|ref|NP_881049.1| putative integral membrane protein [Bordetella pertussis Tohama I] gi|33572761|emb|CAE42691.1| putative integral membrane protein [Bordetella pertussis Tohama I] gi|332382814|gb|AEE67661.1| putative integral membrane protein [Bordetella pertussis CS] Length = 370 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 33/243 (13%), Positives = 92/243 (37%), Gaps = 6/243 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ ++ I + +V + + +++ + + + +++L ++ + T Sbjct: 1 MSLFKRSVVSEITSHAGVVFSTLVVVWLSVLLVRLLGEAAGGSIGADVVLGLAAFSTITA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP + + +T R +E+++ +G S ++PV +A+ +++ + + Sbjct: 61 LPTILAVSLFIAVLTTVTRNYRESEMVVWFASGLSLADWLRPVARVAVPIAMLVAALTLV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISK--YNPNNTLQGIFIVDS 178 P I + + S + F + ++ P + L +F Sbjct: 121 ASPWAYRQIGEYRELFEQRSDLSKVTAGQFAESGRGDRVFFAEDPVRPGDELGAVFARSI 180 Query: 179 RDTQTHKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 D + + A + + + ++L +G + P + +I ++ F Y ++ ES Sbjct: 181 -DPEWLSVLTASNARSETLPNGDRFLVLGEGHRYDLKPGTPEIRLVNFDQYGVRLESKAG 239 Query: 236 STI 238 Sbjct: 240 EDP 242 >gi|297569344|ref|YP_003690688.1| permease YjgP/YjgQ family protein [Desulfurivibrio alkaliphilus AHT2] gi|296925259|gb|ADH86069.1| permease YjgP/YjgQ family protein [Desulfurivibrio alkaliphilus AHT2] Length = 361 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 57/362 (15%), Positives = 121/362 (33%), Gaps = 13/362 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y+ R+ + +V I +I +R++ + + + IP + Sbjct: 4 LLDRYLFWQFTRNLALVLGGLVAIYLLIDFFERVDSFLDAGLGIGTAITYLLLKIPLIFE 63 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P C + L +NR+ EL+ + + G S +I+P+L A+ S + + Sbjct: 64 QLIPVCLLLAGIITLGVLNRHNELMALKSGGLSVRRIIRPLLLAALFFSGLALAAGQWLL 123 Query: 123 PKCRSTIKQ-LSAKAQLALTFSYLEENL-FFRLDDDLYIKISKYNPNNTLQGI-FIVDSR 179 P + + + + ++R +Y +P + L F + Sbjct: 124 PPTLAETNRLWYEEVRQQTPEGIERNGRIYYRGAKGIYSFAQPDDPASGLPDFSFTAWNE 183 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS--T 237 + Q ++ A + R L DG++ + + F T++ Sbjct: 184 EYQLARLLTAAIAHWEAGR--WTLLDGQLKVLTADDQ-YRTTIFNEMTIELPERPEDFFL 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 ++ LS LL + R E ++++ + L+ I Sbjct: 241 PPYALAERPLSELLARALAPEDSPRRY--EARLELQQKISYIFLGLPLLLVGIPLLLAMH 298 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMIK 355 R R + S ++F V WG I + + P L +L S+ I Sbjct: 299 RGRGRDLALAVPASCIMAFAV-WGLWSICQALASAGHLSPALAAWLVHLLAGSLGFYFIL 357 Query: 356 KK 357 ++ Sbjct: 358 RQ 359 >gi|59801588|ref|YP_208300.1| hypothetical protein NGO1229 [Neisseria gonorrhoeae FA 1090] gi|59718483|gb|AAW89888.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090] Length = 356 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 52/370 (14%), Positives = 121/370 (32%), Gaps = 26/370 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +IL + + + +L + +P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGKGSYGIWEMLGYTALKMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + +EL +I +G S L+ + + +I Sbjct: 61 AYELMPLAVLIGGLASLSQLAAGSELAVIKASGMSTKKLLLILSQFGFIFAIAAVALGEW 120 Query: 121 IEPKCRSTIKQLSA-----KAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI 175 + P + + A K T +L+E I + P++TL GI I Sbjct: 121 VAPTLSQKAENIKAAAINGKISTGNTGLWLKEKT-------SIINVRGMLPDHTLLGIKI 173 Query: 176 VDSRDTQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 D + A S ++ D L + + S +++ + Sbjct: 174 WARNDKNELAEAVEADSAVLNSDGS-WQLKNIRRSIMGTDKIETSAAAEETWPIAVRRNL 232 Query: 235 SSTIVLKANDQNLSFL---LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 +++K + ++ L + NN + + Y + ++L + + L++ Sbjct: 233 MDVLLVKPDQMSVGELTTYIRHLQNNS----QNTQIYAIAWWRKLVYPVAAWVMALVAFA 288 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISS 348 R +F + + F + P+ L F + + Sbjct: 289 F--TPQTTRHGNMGLKLFGGICLGLLFHLAGRLFGFTSQLYGTPPFLAGALPTIAFALLA 346 Query: 349 IFLLMIKKKY 358 ++L+ ++K Sbjct: 347 VWLIRKQEKR 356 >gi|15599022|ref|NP_252516.1| hypothetical protein PA3827 [Pseudomonas aeruginosa PAO1] gi|116051855|ref|YP_789302.1| hypothetical protein PA14_14510 [Pseudomonas aeruginosa UCBPP-PA14] gi|218889889|ref|YP_002438753.1| putative permease [Pseudomonas aeruginosa LESB58] gi|254236731|ref|ZP_04930054.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|296387657|ref|ZP_06877132.1| putative permease [Pseudomonas aeruginosa PAb1] gi|313109246|ref|ZP_07795214.1| hypothetical protein PA39016_001710055 [Pseudomonas aeruginosa 39016] gi|9950002|gb|AAG07214.1|AE004800_3 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] gi|115587076|gb|ABJ13091.1| putative permease [Pseudomonas aeruginosa UCBPP-PA14] gi|126168662|gb|EAZ54173.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|218770112|emb|CAW25874.1| putative permease [Pseudomonas aeruginosa LESB58] gi|310881716|gb|EFQ40310.1| hypothetical protein PA39016_001710055 [Pseudomonas aeruginosa 39016] Length = 355 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 53/359 (14%), Positives = 122/359 (33%), Gaps = 11/359 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + L I+ +A + + +N + S++ + L+ P Sbjct: 1 MVKLDRYIGVTVFVAILAVLGVILGLALLFAFIDELNDI-SASYGIGDALRFIFLTAPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ N+EL I+ G S ++ V+ ++L + + Sbjct: 60 AYDMLPMAALIGCLVGLGTLASNSELTIMRAAGVSLSRIVWAVMKPMLVLMLAGILVGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF-IVDSR 179 + P + + A AQ + L+ YI I+ PN L G+ Sbjct: 120 VAPWTENIAQSGRALAQGGGDSQSSKRGLW-HRQGREYIHINAVQPNGVLYGVTRYRFDE 178 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKF--KSYTLQTESANSST 237 +A+ + D L + P K ++K + + Q +T Sbjct: 179 QRGLESASFAKRARFETDH--WQLEEVTTTLLHPREKRSEVVKLPTERWDAQLSPQLLNT 236 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWL--FPVIFGLISIVAADK 295 +V++ ++S L + + Y F ++ Q L ++ IS + Sbjct: 237 VVMEPEALSISGL-WQYIHYLADQGLNNNRYWLAFWTKVLQPLVTAALVLMAISFIFGPL 295 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R++ ++ + + + + P ++ + ++ ++LL Sbjct: 296 RSVTLGQRIFTGVLVGFVFRIAQDLLGPSSL-VFDFPPLLAVVIPASICALAGVWLLRR 353 >gi|308272620|emb|CBX29224.1| hypothetical protein N47_J02050 [uncultured Desulfobacterium sp.] Length = 356 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 58/360 (16%), Positives = 127/360 (35%), Gaps = 16/360 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+ + I + F + I+ I V+ + S + +P Sbjct: 3 MSIIDRYLTKEILKYFCIIIAAIIGIYIVVDFFDETEIFFESGLAFPTAFFCFISKMP-- 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + M++N E++ I + G S L++P+L + + + Sbjct: 61 IAQFIPLSVLLSILVTFGLMSKNNEIVAIKSGGISIYHLLRPILLIGSVFFCVVIFLSEA 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 + P +S +++ +A L+E + +L I Y+ + T+ GI + Sbjct: 121 VVPITKSKAEKILTQANRKKFAMALKEKDIWIKGHNLITHIEYYDSSKKTIHGIKLYFFD 180 Query: 180 DT-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 D + + + G + IL D + + +IS K L + + Sbjct: 181 DKFRVVRRIDCEKGVFNQGN--WILYDIIEQKLDKNNSEISFHKQLIEHLVFSPDDIGVV 238 Query: 239 VLKANDQNLSFLLN--PNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + + L + + Y TYR++F+ +L+ +I + Sbjct: 239 AVTSESMSAFELYDYIKKIESEGYDA---TTYRTDFYAKLSFPFICIIMCFVG--TGIAF 293 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ---NPYYIPILYLFLFCISSIFLLM 353 L + I + +F + F + I E NP++ ++ +F IF ++ Sbjct: 294 RLGAKESLPVNIVYGIGAAFSYWVFFGFCISLGEGGILNPFFAALIPNLVFLGFGIFTVL 353 >gi|289649165|ref|ZP_06480508.1| hypothetical protein Psyrpa2_15669 [Pseudomonas syringae pv. aesculi str. 2250] Length = 353 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 53/362 (14%), Positives = 119/362 (32%), Gaps = 16/362 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLV--SSSTESLNILLKISGYLIP 58 M + YI + + + L I+ + + I+ + S T +L L P Sbjct: 1 MVKLDRYIGKSVLLAILAVLGIILGLV---SLFAFIDEMGDISDTYTLADALSYVMLTAP 57 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + P + L ++ ++EL I+ G S ++ V+ +LL + + Sbjct: 58 RRVYDTLPMAALIGCLIGLGTLASSSELTIMRAAGVSIGRIVWAVMKPMLLLMVAGVLVG 117 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF---I 175 + P + + + AQ + L+ D +I I+ PN + G+ Sbjct: 118 EYVAPYAENQAQAARSLAQGSGDAQSARHGLW-HRQGDEFIHINTVQPNGLMLGVTRYRF 176 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 D R T +A+ + D L D + ++ + + + Sbjct: 177 DDQRHMLTSS--FAKEANFKTD--YWELKDVSTTHFNDGRTEVINTPVERWDVALSPQLL 232 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 ST+++ ++S L N + + Y F ++ Q V L++I Sbjct: 233 STVIMPPESLSISGLWN-YAHYLADQGLSNGRYWLAFWTKVLQPAVTVALVLMAISFIFG 291 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 +R +F + + F + + + L ++ + + Sbjct: 292 P--LRSVTLGQRVFTGVVVGFTFRIIQDLLGPSSLLFGFPPLLAVLMPAAACALAGVYLL 349 Query: 356 KK 357 ++ Sbjct: 350 RR 351 >gi|71064626|ref|YP_263353.1| hypothetical protein Psyc_0045 [Psychrobacter arcticus 273-4] gi|71037611|gb|AAZ17919.1| conserved hypothetical protein [Psychrobacter arcticus 273-4] Length = 416 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 52/396 (13%), Positives = 132/396 (33%), Gaps = 65/396 (16%) Query: 26 IAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTE 85 + ++++ + + +++L I GY +P L ++ P F + V + + E Sbjct: 1 MMLGGRLIRYFGIAAEGNLDISLLFTIIGYNLPYFLELILPLAFFIALMLVFGRLYVDQE 60 Query: 86 LLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYL 145 + +I+ +G SR L + + L + L + + +P + + + + L F + Sbjct: 61 MAVINASGISRGRLGRLMTPLILALFVGEAALSIVGKPWGVRSSENVWQQQALTSAFDLI 120 Query: 146 EENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR--------DTQTHKIYYAQSGSIDL 196 N F + ++ + + + LQ + ++ S T K A++ ++D+ Sbjct: 121 RPNQFIS-SGNYHLYVGSLSDDKKQLQDVILIQSEPEKKGSAVKNNTAKTNTAKNSAMDV 179 Query: 197 DR----------------------------------------------QAIILNDGEVHR 210 + + L G + Sbjct: 180 ENNIDPETAEQLNIPELPNALANSTNISKDAITLAKRAQQVDTGNSGVTQLDLFQGRRYE 239 Query: 211 KSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRS 270 S + + F Y + ++ I + L N + R+ Sbjct: 240 VGAGSLKYNQVGFDRYRITLTESSKEVITEDNIETQAIGPLWQ-AATGNAQVGSNNAMRA 298 Query: 271 ---EFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH 327 E RL+ +I ++++ A R RQ + + +F S+ + G + + Sbjct: 299 AQGELGYRLSLPWLMIIAPMLAVPLAQVRP--RQGRWLR-LFPSILLFVSCVLGIISLKN 355 Query: 328 KIEQ-NPYYIPILYLFL-FCISSIFLLMIKKKYTKI 361 + + + +L L F ++++ + ++ Sbjct: 356 AVGKGSVSVWAYAWLILGFMALALYINWGSRVQHRL 391 >gi|261253952|ref|ZP_05946525.1| putative membrane protein [Vibrio orientalis CIP 102891] gi|260937343|gb|EEX93332.1| putative membrane protein [Vibrio orientalis CIP 102891] Length = 356 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 58/359 (16%), Positives = 136/359 (37%), Gaps = 11/359 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +LYI + I + + V ++ +I+ ++++ V T L L IP + Sbjct: 3 KILDLYIGKTIIATTSLVLATFVGLSAIIKYVEQLRKVGQGTYDLIQALLYVLLSIPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++ + VL A+ L I + + Sbjct: 63 EMFFPMAALLGALIGLGMLASSSELVVMQAAGFSKLDIGLSVLKTAVPLMIMVTLLGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + L A + + ++ R +D +I I K + + Sbjct: 123 APQAQKAARDLRAISTSGGALLSVRTGVWARDAND-FIFIGKVEDDTIYGMNMWRFDENK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--STIV 239 + + +A+ D ++ D ++ +IS Y+ T A + + Sbjct: 182 RLESVVHAKRVDYVSDNT-WMMKDVQLTEMVDEI-EISKHSLPEYSWTTSLAPDKLAVVT 239 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADKRA 297 +K + +L L + + + Y F +++TQ + L++ + R+ Sbjct: 240 VKPEELSLGGLYD-YVSYLKASEQDPARYELAFWRKVTQPFSIAVMMLMALSFIFGPLRS 298 Query: 298 LVRQRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + + + + F+G +++ I P + ++ +F ++ LL K Sbjct: 299 VTMGARILSGVIAGFTFYISSEFFGPLSLVYNIP--PVFGAVMPSIVFLTIALMLLRRK 355 >gi|53803847|ref|YP_114531.1| hypothetical protein MCA2101 [Methylococcus capsulatus str. Bath] gi|53757608|gb|AAU91899.1| putative membrane protein [Methylococcus capsulatus str. Bath] Length = 356 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 57/361 (15%), Positives = 113/361 (31%), Gaps = 7/361 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + + L ++ + + + L + P Sbjct: 1 MNTLNRYIGWEVIKGAAFAALVLLALLNFFTFADELRDLGEGNYGLGSIFLYLTLTSPHS 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + VL +M N EL+ + G SR ++ VL I++S+ + Sbjct: 61 LYELIPSGALIGGLVVLGNMANNHELVAMQAAGVSRGRIVWAVLRAGIVISLISVVISEY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + L A A S + ++ R D ++Y+ + + L I I + Sbjct: 121 VIPPAERAAQMLKATATRQQVASQTKYGVWIR-DGNVYVNVREIENQERLGDIHIFEISP 179 Query: 181 TQTHKIYY-AQSGSIDLDRQAIILNDGEVHRKSP-ISKDISIMKFKSYTLQTESANSSTI 238 + A S DR L D + R P + I+ K + S + + Sbjct: 180 DGRPALAMHAARASF--DRGIWKLEDIGLTRFDPAGNAAIAEHKEQEDWSSVLSPDMLDV 237 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + + + L + F R+ L + L++I Sbjct: 238 FIVRPENLSAQDLAKYMAYQTENAQKSLAVEQAFWGRMVNPLITLAMLLLAIPFVFNAR- 296 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 R I I ++I G + + H P+ + + L ++ Sbjct: 297 -RDVSSGQRIVIGVTIGLGFYLTNRMVSHLGLVYEVNAPLTMVTPPLVVLFAALAAFRRR 355 Query: 359 T 359 Sbjct: 356 P 356 >gi|296122759|ref|YP_003630537.1| permease YjgP/YjgQ family protein [Planctomyces limnophilus DSM 3776] gi|296015099|gb|ADG68338.1| permease YjgP/YjgQ family protein [Planctomyces limnophilus DSM 3776] Length = 394 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 57/404 (14%), Positives = 120/404 (29%), Gaps = 56/404 (13%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YIL + + F +S + + +L+I ++IPT+ Sbjct: 2 MPLLQRYILVDLLKVFAVSAAGFTLLLVFAGVYV---EAKEHGLGPMQILQILPFIIPTL 58 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP P + V ++ + E++ G I+++ P L ++LSIF + + Sbjct: 59 LPFTIPTALLLTVCVVYGRLSGDQEIIAAKAAGIHIISVLWPAFLLGVVLSIFTLVITDQ 118 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEE-NLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P I++ A A + F L+ N D L I + F Sbjct: 119 MIPWSMKRIQRTIAMAVEDIFFDVLKAQNQLNLRDQGLSITVMDVRDRTLYMPTFRYMR- 177 Query: 180 DTQTHKIYYAQSGSI--DLDRQAIILN--DGEVHRKSPISKDISIMKFKSYTLQTESANS 235 A+ + DLDR +++ DG + + + Y + + Sbjct: 178 -GNKPVTVQAKEARLRFDLDRDVVVMEFKDGYISLPDDANTRVRF----RYDAREFPLPN 232 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYR-------------------------- 269 + K+ D +L Sbjct: 233 RSQKAKSRDMTSREILAETRAMATGDATATRQLAIEAALILASGDFDRFGEKEFAVSRYQ 292 Query: 270 ------------SEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFG 317 +E H R++ F L+ A + + + + Sbjct: 293 VDEERNRSMKLTTELHNRISMAFGCFFFVLVGAPFA---VYMAKNQFLTSFLFCFVPILV 349 Query: 318 VFWGFSYIIHKIEQNPYYIPILYLF-LFCISSIFLLMIKKKYTK 360 V++ S + + + P ++ ++ L I ++ + Sbjct: 350 VYYPLSMMAQNLSKVGKVDPSWAVWLPNGALTLGFLYIIRQLAR 393 >gi|117925963|ref|YP_866580.1| permease YjgP/YjgQ family protein [Magnetococcus sp. MC-1] gi|117609719|gb|ABK45174.1| permease YjgP/YjgQ family protein [Magnetococcus sp. MC-1] Length = 371 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 51/368 (13%), Positives = 128/368 (34%), Gaps = 17/368 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 M Y+L+ + F+ + + +++ ++I + ++++ +P Sbjct: 1 MPILFRYLLQLFLQGFVKVFSIFIALFFLMDGAEQIRRFGGRDHVIWQDMVELIFLRMPH 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 P + T V+T + R EL +I + G S + ++ P L ++++ + + Sbjct: 61 FFTQFLPPIALLTTLFVVTRLTRLNELTVIRSGGVSLVRILIPFLLGGVMVAGVQMLLLD 120 Query: 120 IIEPKCRSTIKQLSAKA----QLALTFSYL------EENLFFRLDDDLYIKISKYNPNNT 169 I P+ + ++ + Q AL S + ++NL+ R + Y Sbjct: 121 QIVPRTNAAAERSIFRMNLPEQAALYESMVSLEGVRKDNLWIRDGGQILHAKRAYGDKRL 180 Query: 170 LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ 229 L + I + + A + + + +L++G+++R + + + + Sbjct: 181 LLEVTIF-RFTPEHDLLMRADAHKATWENEGWVLHNGQIYRFNGHTTQSEPFTRMPWAIN 239 Query: 230 TESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 E + + +L L + Y +++L L + L++ Sbjct: 240 LEKEQIKRATPQPEELSLQALWKH-ADRLAREGYDATPYWVTLYRKLADPLTTLAAILLA 298 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWG--FSYIIHKIEQNPYYIPILYLFLFCIS 347 A L R + + F +F + E+ P ++ +F I Sbjct: 299 FPFAL--RLHRMGGTFRSMLMGFITGFFMFVVVDLFTALGFGERLPPFLAAFAPVMFFIC 356 Query: 348 SIFLLMIK 355 L++ Sbjct: 357 IGGFLLLH 364 >gi|308050967|ref|YP_003914533.1| permease YjgP/YjgQ family protein [Ferrimonas balearica DSM 9799] gi|307633157|gb|ADN77459.1| permease YjgP/YjgQ family protein [Ferrimonas balearica DSM 9799] Length = 354 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 52/357 (14%), Positives = 132/357 (36%), Gaps = 6/357 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 ++ +LYI R I + + L + ++ +I+ + ++ LV + + +L+P Sbjct: 2 IRILDLYIARTIINTSALCLLVLTGLSGLIKFVDQLRLVGRGDFTTWDVALYVLFLVPRD 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + + ++EL+++ G SR+ + V+ A+ L I + Sbjct: 62 IEMFFPIAAMLGALIGMGMLASSSELVVMQAAGLSRLNIAASVMKTAVPLMIIAMLIGEY 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-DSR 179 + P T +++ A+ + + + + L++ I++ TL+G+ I Sbjct: 122 VAPVSEQTAREMRAQKTSGGSLISSSTGTWAKDGE-LFVNITEVQDARTLKGVTIYRFDG 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 D +I +A+ G D +A L D + + + Sbjct: 181 DNLLREITFAEQGLY--DGKAWRLLDVTETDLTDEQVSTLDRDELRWPSSLTPEKLQVVT 238 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 +K ++ L++ + + Y +++ Q + + ++++ Sbjct: 239 VKPEGLSIEGLID-YVDYLKANRQDTTRYELALWRKVAQPITVGVMMMLALSFIFGPLRT 297 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP-ILYLFLFCISSIFLLMIK 355 + + SF + + + P ++ +L LF I++ LL + Sbjct: 298 VTMGARVLLGVITGFSFYIANEIFGPMSLVMGLPTFLGAMLPSILFAIAAFALLQRR 354 >gi|224539916|ref|ZP_03680455.1| hypothetical protein BACCELL_04827 [Bacteroides cellulosilyticus DSM 14838] gi|224518470|gb|EEF87575.1| hypothetical protein BACCELL_04827 [Bacteroides cellulosilyticus DSM 14838] Length = 391 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 59/361 (16%), Positives = 138/361 (38%), Gaps = 18/361 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 +K + YI++ +++ + I+ IA V ++++ S I+ IP Sbjct: 33 LKRLDFYIIKKFLGTYVFAIALIISIAVVFDFNEKMDRFMSHEAPWKAIIFDYYLNFIPY 92 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + +TG S +++P + A +++I F + Sbjct: 93 FANLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMLRPYMVSAAIIAIVTFFLGS 152 Query: 120 IIEPKC---RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 I P+ R + K + + T ++ +D + I ++ + F + Sbjct: 153 YIIPQGSVTRINFEDKYYKQRKSNTARNIQ----LEVDSGVIAYIERFEDYSKTGYRFSL 208 Query: 177 DS-RDTQTHKIYYAQSGSIDLDRQA-IILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 D +D Q A+S + D I+ D + + ++ I+K Sbjct: 209 DKFKDKQLVSHLTARSITYDTASVHKWIIKDYMIREMDGMKEN--IVKGDRIDSTLFMEP 266 Query: 235 SSTIVLKANDQNLS--FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + +++K + ++ L ++ + E+HKR+ I LI + Sbjct: 267 ADFLIMKNQQEMMTSPQLSEYISRQRQRGFANIKEFEIEYHKRIAMSFASFILTLIGVSL 326 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 + K+ + + I L++SF + F I N P++ +++ I F+ Sbjct: 327 SSKKT---KGGMGLHLGIGLALSFS-YILFQTIASTFAVNGNVPPVIAVWIPNILYAFIA 382 Query: 353 M 353 Sbjct: 383 F 383 >gi|107103347|ref|ZP_01367265.1| hypothetical protein PaerPA_01004416 [Pseudomonas aeruginosa PACS2] Length = 355 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 53/359 (14%), Positives = 122/359 (33%), Gaps = 11/359 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + L I+ +A + + +N + S++ + L+ P Sbjct: 1 MVKLDRYIGVTVFVAILAVLGVILGLALLFAFIDELNDI-SASYGIGDALRFIFLTAPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ N+EL I+ G S ++ V+ ++L + + Sbjct: 60 AYDMLPMAALIGCLVGLGTLASNSELTIMRAAGVSLSRIVWAVMKPMLVLMLAGILVGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF-IVDSR 179 + P + + A AQ + L+ YI I+ PN L G+ Sbjct: 120 VAPWTENIAQSGRALAQGGGDSQSSKRGLW-HRQGREYIHINAVQPNGVLYGVTRYRFDE 178 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKF--KSYTLQTESANSST 237 +A+ + D L + P K ++K + + Q +T Sbjct: 179 QRGLESASFAKRARFETDH--WQLEEVTTTLLHPREKRSEVIKLPTERWDAQLSPQLLNT 236 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWL--FPVIFGLISIVAADK 295 +V++ ++S L + + Y F ++ Q L ++ IS + Sbjct: 237 VVMEPEALSISGL-WQYIHYLADQGLNNNRYWLAFWTKVLQPLVTAALVLMAISFIFGPL 295 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R++ ++ + + + + P ++ + ++ ++LL Sbjct: 296 RSVTLGQRIFTGVLVGFVFRIAQDLLGPSSL-VFDFPPLLAVVIPASICALAGVWLLRR 353 >gi|289623814|ref|ZP_06456768.1| hypothetical protein PsyrpaN_01505 [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|298485820|ref|ZP_07003898.1| putative membrane protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298159644|gb|EFI00687.1| putative membrane protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330867847|gb|EGH02556.1| hypothetical protein PSYAE_11466 [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330890524|gb|EGH23185.1| hypothetical protein PSYMO_17663 [Pseudomonas syringae pv. mori str. 301020] gi|330989712|gb|EGH87815.1| hypothetical protein PLA107_32131 [Pseudomonas syringae pv. lachrymans str. M301315] gi|331009019|gb|EGH89075.1| hypothetical protein PSYTB_04820 [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 353 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 53/362 (14%), Positives = 119/362 (32%), Gaps = 16/362 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLV--SSSTESLNILLKISGYLIP 58 M + YI + + + L I+ + + I+ + S T +L L P Sbjct: 1 MVKLDRYIGKSVLLAILAVLGIILGLV---SLFAFIDEMGDISDTYTLADALSYVMLTAP 57 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + P + L ++ ++EL I+ G S ++ V+ +LL + + Sbjct: 58 RRVYDTLPMAALIGCLIGLGTLASSSELTIMRAAGVSIGRIVWAVMKPMLLLMVAGVLVG 117 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF---I 175 + P + + + AQ + L+ D +I I+ PN + G+ Sbjct: 118 EYVAPYAENQAQAARSLAQGSGDAQSARHGLW-HRQGDEFIHINTVQPNGLMLGVTRYRF 176 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 D R T +A+ + D L D + ++ + + + Sbjct: 177 DDQRHMLTSS--FAKEANFKTD--YWELKDVSTTHFNDGRTEVINTPVERWDVALSPQLL 232 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 ST+++ ++S L N + + Y F ++ Q V L++I Sbjct: 233 STVIMPPESLSISGLWN-YAHYLADQGLSNGRYWLAFWTKVLQPAVTVALVLMAISFIFG 291 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 +R +F + + F + + + L ++ + + Sbjct: 292 P--LRSVTLGQRVFTGVVVGFTFRIIQDLLGPSSLLFGFPPLLAVLMPAAACALAGVYLL 349 Query: 356 KK 357 ++ Sbjct: 350 RR 351 >gi|160871958|ref|ZP_02062090.1| permease [Rickettsiella grylli] gi|159120757|gb|EDP46095.1| permease [Rickettsiella grylli] Length = 376 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 47/265 (17%), Positives = 101/265 (38%), Gaps = 13/265 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + S L+ + I + + +N V+ + NIL K+ P L Sbjct: 2 ILFRYLTREVLTSLLLITSLLFLILISNEFVHYLNQVAYGKFAANILWKLIVLESPRFLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ PF + + + E+ +++ G S L + L LL + + Sbjct: 62 ILLPFSLCLAILFTYGRLYADYEMTVLNACGFSLGQLTRLSLPFIFLLFFIVAGLSLWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPN-NTLQGIFIVDSRD 180 P S +L + +A+ L+ F + + I + K + + +T++ IF+ + Sbjct: 122 PSLLSYRNKLLTQTGIAIELQTLQPGRFQQTNQGHRIIYVEKVSTDHHTVKNIFLAQTSP 181 Query: 181 TQT------HKIYYAQSGSIDLD----RQAIILNDGEVHRKSPISKDISIMKFKSYTLQT 230 + I A G L+ + +G+ ++ +P + I F++Y + Sbjct: 182 KEASQEITPWTILSAHRGYQTLNPHTKEPFFVAVNGKRYQGTPGQTEYYITAFQNYGIHI 241 Query: 231 ESANSSTIVLKANDQNLSFLLNPNP 255 ++T K + + L N +P Sbjct: 242 NLPRTTTH-KKQDTLSSMALWNASP 265 >gi|320537762|ref|ZP_08037685.1| hypothetical protein HMPREF9554_02439 [Treponema phagedenis F0421] gi|320145385|gb|EFW37078.1| hypothetical protein HMPREF9554_02439 [Treponema phagedenis F0421] Length = 377 Score = 107 bits (268), Expect = 3e-21, Method: Composition-based stats. Identities = 58/358 (16%), Positives = 126/358 (35%), Gaps = 27/358 (7%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K LY+ + + F + LF FI +V IL + S ++ + Y +P ++ Sbjct: 12 KILFLYLSKELLLYFFVCFLFFFFIFFVNNILLMAEDILSKHAPFKDVMLLMFYSLPMII 71 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PF + T + + E L ++ G S L+ PVL + + +SI F + +++ Sbjct: 72 ANSAPFAALVGTLMCIGRFFSDLEFLAMNALGVSMKFLLVPVLAVGLFISIVSFFTNDVL 131 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P ++++ + LE + + + I S + + + I+D + Sbjct: 132 LPASFIQLRKVYWDISTSTPALELESYSIKKNQNAVVI--SGLIKDGIIDELLIIDKGEN 189 Query: 182 QTHKIYYAQSG------------SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ 229 + +I + ++D++ +++ DG K + K Sbjct: 190 KESRILGGKKSELKKSTDPAVIMTLDMNEPQMLIIDG------KDEKKYDSIVGKKIAYN 243 Query: 230 TESANSSTIVLK---ANDQNLSFLLN--PNPNNPNYRPELLETYRSEFHKRLTQWLFPVI 284 + N + + +D L N LL Y EFHK+ + + Sbjct: 244 VLAKNINPVYFNALGPSDMTSYDLYKDIQTRKKNNEDKRLLNIYNMEFHKKFSIPFGALF 303 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 F ++ + + Q + + V G I + + + +++L Sbjct: 304 FVFLAFGISSVGKVHNQSVGFILGLLIAVAYWAVLMGGQEISLTFDVSGAF--MMWLP 359 >gi|167622904|ref|YP_001673198.1| permease YjgP/YjgQ family protein [Shewanella halifaxensis HAW-EB4] gi|167352926|gb|ABZ75539.1| permease YjgP/YjgQ family protein [Shewanella halifaxensis HAW-EB4] Length = 352 Score = 107 bits (268), Expect = 3e-21, Method: Composition-based stats. Identities = 60/349 (17%), Positives = 133/349 (38%), Gaps = 15/349 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + YI R + + ++ L + ++ +I+ + ++ LV T ++ +LIP Sbjct: 1 MRILDFYIARTLISTSSLALLVLTGLSGIIKWVDQLRLVGRGTYTMMDAGVYVLFLIPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + + + N+EL+++ + G SR+ + + AI L I + + Sbjct: 61 IELFFPMAVLLGALIGMGMLASNSELVVMQSAGLSRLQITMSAMKTAIPLMIIVMMLTEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P K++ + ++ + D DL++ I N L+ I + + D Sbjct: 121 VAPVAELRAKEIKRTNISGGSLIDSNRGIWAK-DGDLFVNIGGAADINNLRDITLYEFDD 179 Query: 181 TQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 T T +A S + L D + ++ +K + + S + Sbjct: 180 TTTLTSTIHADSAEYK--DKYWQLYDVRRTTLTDDRVVLTNLKEEKWVSSLTPEKLSVVS 237 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 +K ++ LL+ + + E Y ++L Q + + L+++ Sbjct: 238 VKPEALSIEGLLD-YLDYLKSNNQASERYELALWRKLLQPVTVAVMMLVALSFVFGP--- 293 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 + + + + GV GFS+ I P I +Y IS+ Sbjct: 294 -----LRTVTMGARVLLGVVAGFSFYICSEIFGPLSI--VYGLPAFISA 335 >gi|255536554|ref|YP_003096925.1| hypothetical protein FIC_02430 [Flavobacteriaceae bacterium 3519-10] gi|255342750|gb|ACU08863.1| membrane protein, putative [Flavobacteriaceae bacterium 3519-10] Length = 364 Score = 107 bits (268), Expect = 3e-21, Method: Composition-based stats. Identities = 60/372 (16%), Positives = 132/372 (35%), Gaps = 24/372 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILL-KISGYLIPT 59 MK +L+I++ +F + I +I + + + S+ S+ L Y I Sbjct: 1 MKIIDLHIIKKYLGTFAFMLGLLTLIVLIIDVQAKAPRIESNGFSVTEFLINFYPYWIVN 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ + + M NTE++ I ++G S +P L + ++ + + Sbjct: 61 LIITFMSILVFISVIFFTSRMANNTEIVAIISSGASFHRFARPYLITSSFIAAIALLLNH 120 Query: 120 IIEPKCRSTIKQLS-----AKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF 174 + P +L AK++ + + + YI I YN F Sbjct: 121 FVLPLANVKKNELEPYTYTAKSREEYIGNTEVSTQLSKSE---YIFIKSYNRKERRGSGF 177 Query: 175 IVDSRDTQTHKIY--YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 + D Y A S D + ILN + + + + + T Sbjct: 178 MYQKFDKNRKLTYQIIANEFSWDDKKSHFILNS-YLEKTVRKDETEKLGSGDTMTKSFGH 236 Query: 233 ANSS--TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 VL ++ L+ L Y++E H+R + + +I + + Sbjct: 237 PPEELFPGVLLGQNKTTPDLIGFIDREKEKGNANLGNYQNELHQRTSMPVSVIILTFLGL 296 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSY-IIHKIEQNPYYIPILYLFL----FC 345 A ++++ + +++ IS + FS+ + + +N P+L ++L F Sbjct: 297 SLA-----SQKKRGGLGMNLAIGISLAFVFVFSFEALKVVSKNQSLPPLLAMWLPNLIFG 351 Query: 346 ISSIFLLMIKKK 357 +++L + + Sbjct: 352 PVALYLYLKRAN 363 >gi|299771879|ref|YP_003733905.1| hypothetical protein AOLE_18250 [Acinetobacter sp. DR1] gi|298701967|gb|ADI92532.1| hypothetical protein AOLE_18250 [Acinetobacter sp. DR1] Length = 356 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 53/353 (15%), Positives = 128/353 (36%), Gaps = 8/353 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y+ + + + + + + + L + + + L + P L Sbjct: 5 RIVAKYVTKTTALAMFGTTVVLSILQILFTYLGELGELKPD-YNAWQALIYVLWGAPRYL 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L S+ ++EL+++ + G S ++ V+ A+LL I F + Sbjct: 64 YEILPISALIGAVIGLGSLATSSELIVMRSAGISLWRIVGWVMRSALLLIILSFALSEWV 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SRD 180 P + K+ ++ + + R + +I I N L+ I +VD ++ Sbjct: 124 IPYTNEKAASV--KSHRSVAALGEVKGYWSR-EGQRFIYIDYANSQGNLKDIQVVDFDQN 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + AQ G D Q + ++ + + + +S +L + + L Sbjct: 181 YYLQSLINAQQGQFVKDGQWALKKAQQMDILAAGNAIKTDHDEQSLSLALQPKYVHMVTL 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADKRAL 298 D + S L++ Y ++ +TY+ F +++ + L++ + R Sbjct: 241 DPEDLSPSQLISFMRYMDEYS-QVPKTYQLAFWQKVASPFSLIALVLVACSFIFGPLRQQ 299 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + + +FI LS + + + +++ + L +F S L Sbjct: 300 SMGFRLVIALFIGLSFYYLQDFLGYASLVYAPSPAWFVLVPILLMFGAGSYLL 352 >gi|262280664|ref|ZP_06058447.1| permease YjgP/YjgQ family protein [Acinetobacter calcoaceticus RUH2202] gi|262257564|gb|EEY76299.1| permease YjgP/YjgQ family protein [Acinetobacter calcoaceticus RUH2202] Length = 356 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 55/360 (15%), Positives = 130/360 (36%), Gaps = 13/360 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y+ + + + + + + + L + + + L + P L Sbjct: 5 RIVAKYVTKTTALAMFGTTVVLSILQVLFTYLGELGELKPD-YNAWQALIYVLWGAPRYL 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L S+ ++EL+++ + G S ++ V+ A+LL I F + Sbjct: 64 YEILPISALIGAVIGLGSLATSSELIVMRSAGISLWRIVGWVMRSALLLIILSFALSEWV 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SRD 180 P + + K+ ++ + + R + +I I N L+ I +VD ++ Sbjct: 124 IPYTNEKAQSV--KSHRSVAALGEVKGYWSR-EGQRFIYIDYANSQGNLKDIQVVDFDQN 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISI-MKFKSYTLQTESANSSTIV 239 + AQ G + Q L E I +S L + + Sbjct: 181 YYLQSLINAQQGQFVKNGQ-WALKKAEQMDILAAGNAIKTDHDEQSLALALQPKYVHMVT 239 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L D + S L++ Y ++ +TY+ F +++ + L++ + Sbjct: 240 LDPEDLSPSQLISFMRYMDEYS-QVPKTYQLAFWQKVASPFSLIALVLVACSFIFGP--L 296 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKI---EQNPYYIPILYLFLFCISSIFLLMIKK 356 RQ+ + I+L I ++ ++ + +P + ++ + L + +LL + Sbjct: 297 RQQSMGFRLVIALFIGLSFYYLQDFLGYASLVYSPSPAWFVLVPILLMFGAGSYLLYRAR 356 >gi|254242518|ref|ZP_04935840.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|126195896|gb|EAZ59959.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] Length = 355 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 53/359 (14%), Positives = 122/359 (33%), Gaps = 11/359 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + L I+ +A + + +N + S++ + L+ P Sbjct: 1 MIKLDRYIGVTVFVAILAVLGVILGLALLFAFIDELNDI-SASYGIGDALRFIFLTAPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ N+EL I+ G S ++ V+ ++L + + Sbjct: 60 AYDMLPMAALIGCLVGLGTLASNSELTIMRAAGVSLSRIVWAVMKPMLVLMLAGILVGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF-IVDSR 179 + P + + A AQ + L+ YI I+ PN L G+ Sbjct: 120 VAPWTENIAQSGRALAQGGGDSQSSKRGLW-HRQGREYIHINAVQPNGVLYGVTRYRFDE 178 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKF--KSYTLQTESANSST 237 +A+ + D L + P K ++K + + Q +T Sbjct: 179 QRGLESASFAKRARFETDH--WQLEEVTTTLLHPREKRSEVVKLPTERWDAQLSPQLLNT 236 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWL--FPVIFGLISIVAADK 295 +V++ ++S L + + Y F ++ Q L ++ IS + Sbjct: 237 VVMEPEALSISGL-WQYIHYLADQGLNNNRYWLAFWTKVLQPLVTAALVLMAISFIFGPL 295 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R++ ++ + + + + P ++ + ++ ++LL Sbjct: 296 RSVTLGQRIFTGVLVGFVFRIAQDLLGPSSL-VFDFPPLLAVVIPASICALAGVWLLRR 353 >gi|295132762|ref|YP_003583438.1| permease [Zunongwangia profunda SM-A87] gi|294980777|gb|ADF51242.1| predicted permease [Zunongwangia profunda SM-A87] Length = 358 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 54/362 (14%), Positives = 133/362 (36%), Gaps = 9/362 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL+ +F M L + I + + ++I+ + + + + Sbjct: 1 MKILDWYILKRYLGTFSMMLLLFIPIGITVNLAEKIDKILENEVPFVEVAEYYLNFTIYF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + + + NTE++ ++G S ++P + A ++ I Sbjct: 61 ANLLFPLFLFLSIIWFTSKLANNTEVIAFLSSGVSFYRFLRPYIIGATIVCIAALGLSMF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + PK + + + ++++ +++D+ I S + P F+++ + Sbjct: 121 LAPKASKGFNEFKYEYLKRGHETQETKDVYRQVNDNEVIYASHFRPKTHTANNFVIEHFE 180 Query: 181 TQTHKI-YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 K A + + L + + +S L E + Sbjct: 181 GNQLKFKISASRLKFNTEDSTYTLTNVDKRIIGENGDIMSNQAKLDTILPFEFDELTPET 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 A + S L + Y +KR++ + I +I++ ++ Sbjct: 241 YIAETLSFSELNEFIKKESRRGSGNMNMYLVAAYKRVSIPVSAFILTIIAVAV---SSMK 297 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL----FCISSIFLLMIK 355 R+ + + +S++F +F F + I + + P+L +++ F I ++FLL+ Sbjct: 298 RRGGMGVNLAVGISLAF-IFIFFDKVFGTIAEQSTFSPLLAVWIPNISFGILAVFLLLKA 356 Query: 356 KK 357 K+ Sbjct: 357 KR 358 >gi|323492970|ref|ZP_08098108.1| lipopolysaccharide ABC transporter permease [Vibrio brasiliensis LMG 20546] gi|323312801|gb|EGA65927.1| lipopolysaccharide ABC transporter permease [Vibrio brasiliensis LMG 20546] Length = 356 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 55/358 (15%), Positives = 132/358 (36%), Gaps = 9/358 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +LYI + I + + V ++ +I+ ++++ V T L L IP + Sbjct: 3 KILDLYIGKTIIATTSLVLATFVGLSAIIKYVEQLRKVGEGTYDLIQALLFVLLSIPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++ + VL A+ L + + + Sbjct: 63 EMFFPMAALLGALIGLGMLASSSELVVMQAAGFSKLNIGMSVLKTAVPLMVLVTLLGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + L A A + ++ R +D +I I K + + Sbjct: 123 APQAQKMARDLRAFATSGGAILSVRTGVWARDAND-FIFIGKVEDDKIYAMNMWRFDEEK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-DISIMKFKSYTLQTESANSSTIVL 240 + + +A + D + D ++ + + S+T + + + Sbjct: 182 RLESVVHAATVEYVADNT-WKMKDVQLTEMVDEVEISKQSLPEYSWTTSLAPDKLAVVTV 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADKRAL 298 K + +L L + + Y F +++TQ + L++ + R++ Sbjct: 241 KPEELSLGGLYD-YVTYLKASEQDPSRYELAFWRKVTQPFSIAVMMLMALSFIFGPLRSV 299 Query: 299 VRQRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + + + F+G +++ I P + ++ +F ++ LL K Sbjct: 300 TMGARILSGVIAGFTFYISSEFFGPLSLVYNIP--PVFGAVMPSLVFLTIALMLLRRK 355 >gi|15807418|ref|NP_296151.1| hypothetical protein DR_2431 [Deinococcus radiodurans R1] gi|6460246|gb|AAF11972.1|AE002073_2 conserved hypothetical protein [Deinococcus radiodurans R1] Length = 420 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 53/374 (14%), Positives = 136/374 (36%), Gaps = 26/374 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK FE Y+L I + + ++ + + + + I + + S ++ ++ +P Sbjct: 6 MKLFERYVLSEILPPLVGALAAVILLFLLAGLEEVIGPLLAKGASPLLVARLLALSVPEA 65 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P T L+ + ++E+ G L++PVL LA+ +++ F+ Sbjct: 66 LSRALPIGLMFATLLGLSRLAADSEIKGALAGGVPVTRLLRPVLLLALGITVLSFLIGEG 125 Query: 121 IEPKCRSTIKQLSAKAQLALT--FSYLEENL-----FFRLDDDLYIKISKYNPNNTLQGI 173 + PK S ++ + + + I + + P L+ + Sbjct: 126 LRPKAYSESLRVQQQIVFDNPRVTGLGQAGEGGQTLVLTDALNRAISVGEVRPGGELRDL 185 Query: 174 FIVDSRDTQTHK-IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE- 231 IV + + + + A+SG++ + L G+ ++ ++++ F++ L + Sbjct: 186 RIVAMQAGEAPREVITAESGTLVPGSNVLELRRGQRVTYQ-NARPVTVLSFENGRLPVQD 244 Query: 232 -------SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVI 284 SST + L L + + + + FH+++ + L + Sbjct: 245 VQANFAKDERSSTAQAGLVNLPLRELWDRTEAFRQQKVPAPAEFTA-FHRKIAEPLAALA 303 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL--- 341 ++ A + ++ ++F + +S + +N P++ Sbjct: 304 LAFFAVSLA---VYSFRGSLNLGFTWAILLAFAYYATWSVF-RIMGENGGLPPVVAAYAP 359 Query: 342 -FLFCISSIFLLMI 354 + ++ + LL Sbjct: 360 DLIAVVAGLALLWR 373 >gi|189425644|ref|YP_001952821.1| permease YjgP/YjgQ family protein [Geobacter lovleyi SZ] gi|189421903|gb|ACD96301.1| permease YjgP/YjgQ family protein [Geobacter lovleyi SZ] Length = 359 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 60/364 (16%), Positives = 135/364 (37%), Gaps = 16/364 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 Y+ R FL+ + + ++ ++++ S + SL+ +L+ + IP +L Sbjct: 3 GIVGRYLAGTWLRLFLLCQGGFLAVYLILDFMEKLGRFSKAGASLSAILQFFLFKIPEML 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PF M T L ++R++EL + + G S ++ P+L L +L S+ L ++ + Sbjct: 63 GQTMPFAVLMATLLALGMLSRSSELTALRSCGLSIPRIVLPILMLGLLGSLVLLVNSEFV 122 Query: 122 EPKCRSTIKQLS-AKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSR 179 PK ++ + + ++ N + ++L ++ + P TL+G+ + + Sbjct: 123 VPKSYQQMEHIEKVVIKKQSVNTFFRLNNIWFRSNNLILQAKVFEPLTRTLKGVTVWELS 182 Query: 180 DTQTHKIYY-AQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 A+ ++ R + ++ ++ Sbjct: 183 ADMQPVRRMDAEQALYGSGGWELLQV-----RTRSFAGQGGVVASARLSVPLTLKVDDLR 237 Query: 239 VLKANDQNLSFL-LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +L N N SF L + YR+ H +L + ++ I A K Sbjct: 238 ILDNNADNFSFRKLREYAVSLEKGGYPAGRYRTMMHAKLALPFGAFVMVVLGIPFALK-- 295 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF----LFCISSIFLLM 353 R + ++I F F + + ++ P + + +F ++ I+L M Sbjct: 296 TGRTSGVAMGVGAGVAIGFAYFII-NAAVQSYGRSGVLPPFVAAWGANLIFVLTGIWLSM 354 Query: 354 IKKK 357 K+ Sbjct: 355 TVKQ 358 >gi|260891450|ref|ZP_05902713.1| permease, YjgP/YjgQ family [Leptotrichia hofstadii F0254] gi|260858833|gb|EEX73333.1| permease, YjgP/YjgQ family [Leptotrichia hofstadii F0254] Length = 358 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 56/361 (15%), Positives = 123/361 (34%), Gaps = 17/361 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI+ +SF++ + I + + + + + ++ Y P + Sbjct: 1 MNKLDKYIILNYVKSFILGMMMFFLIFLLAESISLTGWIMDGKLKGHDAIRYLRYGTPEI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + ++ M + E+ + +G S + + + L+S+ +F Sbjct: 61 ITNTAPLGVLLGSLLCISKMAKQLEIAAMKTSGISFARIALFPMIFSFLVSMGVFWLNYD 120 Query: 121 IEPKCRSTIKQLSA-KAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQ--GIFIV 176 K + + L + K ++ +F ++D + N N T++ I Sbjct: 121 ALGKSNTKKENLKSLKIDNKEPVKSEKKFIFVKIDKKTVLFSEHVNKNTGTMEHIEILKF 180 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + KIY + G I+ D + + + K + + + Sbjct: 181 EKGFKEISKIYTSPFGKINPKTNEWTFKD--LKEYDDKTNLMKPADTKKFKFIAKMEDVL 238 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 +KA + + L + L R EF+ R++ L + LI + Sbjct: 239 ASPVKAKNLTMPELREKVVYFTRVGADSLN-LRIEFYYRISFALSSFVMCLIGLSLG--- 294 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-----LYLFLFCISSIFL 351 R + + I LS+ G + I + +PI + L +F I I L Sbjct: 295 --SRYVRGGAALNIGLSVIIGYAYYGVSTILRSMAVSGAVPIYAACFIPLIIFLIVGIKL 352 Query: 352 L 352 Sbjct: 353 F 353 >gi|261492351|ref|ZP_05988913.1| putative inner membrane protein [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496137|ref|ZP_05992545.1| putative inner membrane protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261308239|gb|EEY09534.1| putative inner membrane protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312034|gb|EEY13175.1| putative inner membrane protein [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 365 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 52/368 (14%), Positives = 127/368 (34%), Gaps = 22/368 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E YI + I + ++ ++ + +I+ ++ V + + IP Sbjct: 6 MNILERYIGKTILSAIFLTLFMLIGLGAIIKFVEEFRDVGRGSYDGLKAAYYTFLTIPRD 65 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + L ++ +EL+++ +G SR + V+ A+ L +F I Sbjct: 66 IETFFPIAALLGSLLGLGNLASRSELVVMQASGFSRFRIGLAVMKTALPLVLFTMIIGEW 125 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD--- 177 P+ + + + AQ + ++ F+ D + +I I+ +L + I Sbjct: 126 GVPQTEQFARNMRSIAQSGGSMLATKDG-FWAKDGNSFIYINHIKNEKSLDNVLIYQFGE 184 Query: 178 -SRDTQTHKIYYAQSGSIDLDRQAIILND------GEVHRKSPISKDISIMKFKSYTLQT 230 + + A + + D + +L+ GE + D + + Sbjct: 185 GQNKRELQSVLKAGTANY-SDEKGWVLSKVEKSTVGENQIQQAKQPD------QVWQTSL 237 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 + + LK ++S L + + + + F +++ Q + + L++I Sbjct: 238 TPSKLGIVSLKPESLSISGLAD-YVGFLKDTGQDPKRFEITFWRKVFQPISMAVMMLLAI 296 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY-IPILYLFLFCISSI 349 +R I I + F + + + +P+ L + I Sbjct: 297 SFIFGP--LRSSTMGAKIVIGIVAGFMFYVANIVFGNLSLIATWLPVPVGALIPSLLCLI 354 Query: 350 FLLMIKKK 357 + + K Sbjct: 355 IVWWLLSK 362 >gi|325919212|ref|ZP_08181261.1| putative permease [Xanthomonas gardneri ATCC 19865] gi|325550312|gb|EGD21117.1| putative permease [Xanthomonas gardneri ATCC 19865] Length = 360 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 54/358 (15%), Positives = 130/358 (36%), Gaps = 19/358 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L +SFL + + ++ ++ ++ + ++ +LL G Sbjct: 1 MPKLDRYLLSDFTQSFLATLIVLLVVSVGGVLVDILGNIADGRIPARLLLSQVGLQFVAY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP++ P + L + R++E+ +I G +++P+L L + + + + + Sbjct: 61 LPIILPLALMLGLLLALARLYRDSEMAVITAIGVGPRRMLRPILMLVVPVVVLIGLCSLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSR 179 + P T + + A ++ + LE F L + ++ + + L +F+ + Sbjct: 121 LGPWASRTAETMLEDANRSVLMAGLESGKFTPLSGGGVVYLTTISADGKGLGKVFMQRQK 180 Query: 180 DTQTHKIYYAQSGSIDLDRQA---IILNDGEVHRK--SPISKDISIMKFKSYTLQTESAN 234 D + + A+ G++ + +A + L DG + + D +MKF S + + Sbjct: 181 DDRID-VVTAERGAMFFEGKANRYLRLEDGYRIEGPAAGNTLDYRLMKFASNDVALPDRS 239 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + LL+ + R++ H+RL L + Sbjct: 240 QVHDANDPEVMWTTQLLS----------DERPAARAQLHERLAPPLL--ALAFALLTLPL 287 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 R+ RQ++ + L+ G L+ + ++ + Sbjct: 288 SRSAPRQQRYGRIMLAFLAYMVGTNLMIVGTQWIANGKTPAALGLWWLTLPLLAVAIW 345 >gi|218961269|ref|YP_001741044.1| putative Permease [Candidatus Cloacamonas acidaminovorans] gi|167729926|emb|CAO80838.1| putative Permease [Candidatus Cloacamonas acidaminovorans] Length = 362 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 55/366 (15%), Positives = 131/366 (35%), Gaps = 23/366 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + YI+R R++L+ L V I VI ++ + + + + +P + Sbjct: 1 MRILDKYIIREFLRTYLIIFLSFVAIFVVIDVIDNLPRLIRNGATAQQATIYYLMRLPYL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + +P + ++++++++ E + I G S + P+ + +++SI + + Sbjct: 61 LVLTSPVTVLLTGLFMMSALSKHNESIAIRAAGISIKRAMLPLFGIGLIISIAVAVFGEY 120 Query: 121 IEPKCRSTIKQLSAKAQ---LALTFSYLEENLFFRLDDDLYIKISKYNP---NNTLQGIF 174 + P +T K Q L+ + ++ + + ++ N + + Sbjct: 121 VVPWAETT-KNYVYNVQIKGQQPDDQMLKARIHYQGKANDFYYFGFFDGYKNNLKIIDLT 179 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 +D + Q + A S D + IL D ++ R + + + + L Sbjct: 180 RIDFKTKQITEHITASSA--DWNGSRWILKDCDLRRFANGKQVF-MAHYPQTDLVILDVQ 236 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSE---FHKRLTQWLFPV--IFGLIS 289 ++ + + LS +L + E H +++ L + IF I Sbjct: 237 PQDF-IRISQKTLSLNFWQLKEYIGRMKKLGDNAAREIVDLHMKISFPLTNLIVIFFFIP 295 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ---NPYYIPILYLFLFCI 346 I + +R + + I + L + F NP++ F + Sbjct: 296 IA----TSNIRSKGRGWIIMLGLVVCFIYLIVVRVCQSLGYNSIINPFWAAWFPNIFFTL 351 Query: 347 SSIFLL 352 + L Sbjct: 352 LGLGFL 357 >gi|149373007|ref|ZP_01891963.1| hypothetical protein SCB49_11577 [unidentified eubacterium SCB49] gi|149354367|gb|EDM42934.1| hypothetical protein SCB49_11577 [unidentified eubacterium SCB49] Length = 515 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 43/234 (18%), Positives = 91/234 (38%), Gaps = 16/234 (6%) Query: 24 VFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRN 83 +FI + I I+ ++ ++I+LK + P ++ +V P + + V Sbjct: 1 MFIFILQGIWLYISELAGKDLDISIVLKFLWFYSPRIVTLVLPLSILVTSLMVFGGFAER 60 Query: 84 TELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFS 143 E + +TG S ++ + +LL I F N + P + L Q Sbjct: 61 YEFAAMKSTGISLQRAMRSLSVFILLLGITAFFFSNNVIPYSEYKWQNLRRNIQQFKPSM 120 Query: 144 YLEENLFFRLDDDLYIKISKYNPNNT--LQGIFIV--DSRDTQTHKIYY-AQSGSIDLDR 198 + F ++ D+L IK+++ + N L+G+ I D + + I A+ G + + Sbjct: 121 VIAAGQFNQIGDELNIKVAEKSGENGEFLEGVIIHRKDMKKPSNNLIVTIAEKGELTSEE 180 Query: 199 Q----AIILNDGEVHR-------KSPISKDISIMKFKSYTLQTESANSSTIVLK 241 ++IL +G ++ K + F+ YT+ + + + Sbjct: 181 GSNTLSLILKNGYDYQELIEKDYKKQHREPYVKTYFEEYTINIDLTALNAKDVD 234 Score = 40.7 bits (94), Expect = 0.32, Method: Composition-based stats. Identities = 19/159 (11%), Positives = 52/159 (32%), Gaps = 9/159 (5%) Query: 206 GEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA---NDQNLSFLLNPNPNNPNYRP 262 G + K +++I + + L + ++ N + R Sbjct: 277 GSIKFKDEKTENIPVSDTVTSILDIYLPHERADIIGMAINNVNGTIQAAKAKKEDSKNRV 336 Query: 263 ELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGF 322 L Y H+++ +I I A A++R+ P+ +++ + + Sbjct: 337 RKLNKYEIALHEKIVLGFACIILFFIG---APLGAIIRKGGMGLPMVVAVVLFLTYHFIG 393 Query: 323 SYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMIKKKYT 359 + + E + P L ++ + + + + + T Sbjct: 394 IFAKNSAE-DGSIHPFLGTWISTLIMLPLSIWLTYRATT 431 >gi|87310838|ref|ZP_01092964.1| hypothetical protein DSM3645_18031 [Blastopirellula marina DSM 3645] gi|87286353|gb|EAQ78261.1| hypothetical protein DSM3645_18031 [Blastopirellula marina DSM 3645] Length = 389 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 53/394 (13%), Positives = 127/394 (32%), Gaps = 43/394 (10%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ YIL I + F ++ + + ++ ++Q+ + +I Y+IP Sbjct: 1 MRIITRYILWEILKIFFLALGALTLLIVLVGVVQQ---ALREGLGPGPIARIIPYMIPDA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + +V + EL + G S + + P +A++LSI +I Sbjct: 58 LRFSIPGTILFASCSVYGRLASGNELAALKAAGVSPLAALWPGYAIALVLSIACVWLNDI 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLE-ENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 ++++ ++ + + L F D L I + + + ++ + + Sbjct: 118 GVSWGSQGVRRVLVQSFEEIAYGMLRTHKSFSS--DKLSILVREVDGRRLMRPQIVAAAT 175 Query: 180 DTQTHKIYYAQSGSIDLDRQ---------AIILNDGEVH-----------------RKSP 213 T + A + D + I +DG SP Sbjct: 176 PTSPQLLISAAEAELHSDENHQLIISLIDSRIESDGSQQGVFEHPGRMDHVVSLSDELSP 235 Query: 214 ISKDIS---------IMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPEL 264 + S +++ + +QT+ A L P + +Y Sbjct: 236 EHRSPSKILSSRIPQVLREERQIVQTQKEADIAWSAFAQIATLDAAQRTPPFDISYINSQ 295 Query: 265 LETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSY 324 + R+E +R + F L+ + A K+ L + + ++ Sbjct: 296 INRLRTEPWRRWANGFSCLFFVLLGVPLAIKQRN--PDFVTSFFMAFLPVLLVFYPLLAF 353 Query: 325 IIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + + + +++ + + L ++ + Sbjct: 354 AVDRAKDGAVPPQAVWIGNVALLLVSLYYLRMVW 387 >gi|319902150|ref|YP_004161878.1| permease YjgP/YjgQ family protein [Bacteroides helcogenes P 36-108] gi|319417181|gb|ADV44292.1| permease YjgP/YjgQ family protein [Bacteroides helcogenes P 36-108] Length = 378 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 64/369 (17%), Positives = 140/369 (37%), Gaps = 19/369 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 +K + YI++ +++ + I+ IA V ++++ S I+ IP Sbjct: 20 LKRLDWYIIKKFLGTYVFAIALIISIAVVFDFNEKMDRFMSHEAPWNAIVFDYYLNFIPY 79 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + +TG S +++P + A ++++ F + Sbjct: 80 FANLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFRRMLRPYMVSAAIIAVITFCLGS 139 Query: 120 IIEPKC---RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 I PK R + K + A T ++ +D + I ++ + F + Sbjct: 140 YIIPKGSVTRINFEDKYYKPRKANTARNIQ----LEVDSGVIAYIERFEDYSKTGYRFSL 195 Query: 177 DS-RDTQTHKIYYAQSGSIDLDRQA-IILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 D RD Q A+S + D I+ D + + + SI K Sbjct: 196 DKFRDKQLVSHLTARSITYDTTSVHKWIVKDYMIRAMDGMKE--SITKGDRIDTTLFMEP 253 Query: 235 SSTIVLKANDQNLS--FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + +++K + L+ L ++ + E+HKR+ I LI + Sbjct: 254 ADFLIMKNQQEMLTSPQLSEYIDRQRQRGFANIKEFEIEYHKRIAMSFASFILTLIGVSL 313 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF-LFCISSIFL 351 + K+ + + I L++SF + F I N P++ ++ + + Sbjct: 314 SSKKT---KGGMGLHLGIGLALSFS-YILFQTIASTFAVNGNVPPVIAIWIPNVLYAFVA 369 Query: 352 LMIKKKYTK 360 L + +K K Sbjct: 370 LYLYRKAPK 378 >gi|257465008|ref|ZP_05629379.1| permease, inner membrane protein yjgQ [Actinobacillus minor 202] gi|257450668|gb|EEV24711.1| permease, inner membrane protein yjgQ [Actinobacillus minor 202] Length = 360 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 53/365 (14%), Positives = 120/365 (32%), Gaps = 19/365 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E YI + I + ++ +V + +I+ ++ V + + + IP Sbjct: 6 MNVLERYIGKTILSAIFLTLFLLVGLGAIIKFVEEFKAVGKGSYDALLAAYYTFLTIPRD 65 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + L ++ +EL+++ +G SR + V+ A+ L +F I Sbjct: 66 VETFFPIAALLGSLLGLGNLASRSELVVMQASGFSRFRIGLAVMKTAVPLILFTMIIGEW 125 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + + + + F+ D + ++ I + L + I Sbjct: 126 GVPQTEQYARDMRS-VAQSGGSMLSTSGGFWARDGENFVYIRRIGSETQLNNLSIYHFDK 184 Query: 181 TQTHKIYYAQSGSIDLDRQAII-----LNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + I A D + +G ++S L S Sbjct: 185 KELKSITQAAEAKYTNDNWILKKVEKSTIEGNTIKQSKEKDQPWQTSITPSKLGIVSLKP 244 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 ++ + + FL + + + F +++ Q + + L++I Sbjct: 245 ESLSITGLADYVGFL--------KETGQDPKRFEITFWRKVYQPISMAVMMLLAISFIFG 296 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY---IPILYLFLFCISSIFLL 352 +R I I + F + + + I L L C+S ++ L Sbjct: 297 P--LRSSTMGAKIVIGIVAGFMFYVANIVFGNMSLIATWLPVSIGALIPSLICLSIVWWL 354 Query: 353 MIKKK 357 + KK+ Sbjct: 355 LTKKR 359 >gi|94984157|ref|YP_603521.1| permease YjgP/YjgQ [Deinococcus geothermalis DSM 11300] gi|94554438|gb|ABF44352.1| permease YjgP/YjgQ [Deinococcus geothermalis DSM 11300] Length = 367 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 56/373 (15%), Positives = 134/373 (35%), Gaps = 21/373 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK FE Y+L I + + ++ + + + I + + + ++ ++ +P Sbjct: 1 MKRFERYVLAEILPPLVGALGVVIVLLLLALLEGVIAPLLAKGANPLLVARLVALNVPEA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P L+ + ++E+ +G L +PVL LA L+++ F + Sbjct: 61 LAQGLPIALMFAALLGLSRLAADSEIKAALASGVPTSRLFRPVLLLAALVTLGTFAINEL 120 Query: 121 IEPKCRSTIKQLSAKAQLALT------FSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF 174 + + + ++ + + L + NL R + I + + P L+ + Sbjct: 121 LVTRAKVQVQSVQREIVLDNPRVIGLGTRDGQGNLVLRDALNRAISVGEALPGGELRDLR 180 Query: 175 IVDSRDTQTHK-IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 IV + + + A+ G + + L DG+ ++++ F +L + Sbjct: 181 IVTMQAGLPPREVITARRGRLKPGSNVLELEDGQRITFQDARP-VTVLTFARGSLPVQDV 239 Query: 234 NSS----TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 +S LK L LL + + + + H++ + L + Sbjct: 240 QASFEGGDATLKPIYLPLRELLARMQTYRQQKVQAPADFTA-LHRKFAEPLAALALAFFV 298 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL----FLFC 345 + A + + + +L +SF + +S + +N P+L + Sbjct: 299 VSLA---VFAFRSGQNLGLVWALLLSFAYYATWSVF-RVMGENGAVPPVLAAYAPDLIAV 354 Query: 346 ISSIFLLMIKKKY 358 ++ + LL + Sbjct: 355 LAGLLLLWRASRR 367 >gi|145631589|ref|ZP_01787355.1| predicted permease [Haemophilus influenzae R3021] gi|144982789|gb|EDJ90315.1| predicted permease [Haemophilus influenzae R3021] Length = 358 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 55/362 (15%), Positives = 137/362 (37%), Gaps = 11/362 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + + YI + I + + + +V ++ +I+ +++ V T + + +G +P Sbjct: 2 INTLDRYIGKSILGAIFATLMTLVGLSAIIKFVEQFRSVGKGTYDIWQAVIFTGLTMPKD 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ +EL+++ + G SR + V+ A+ L +F I Sbjct: 62 IETFFPMAALLGALIALGNLASRSELVVMQSAGFSRFKIGMAVMKTALPLVVFTMIIGEW 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SR 179 P+ + + AKA + ++ ++ + D ++ + + + L I+I + Sbjct: 122 GIPQTEQFARDMRAKALSGGSILSIKNGVWAK-DGHHFVFVRRVTDDTKLDDIYIYTFDQ 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS--T 237 K+ +A S D L +V+ + +I S T +T Sbjct: 181 QHNLIKLKHANQASYSEDEAKWTLR--QVNHSTITKDEIITTNHLSETWETSLTPDKLGA 238 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L+ ++S L + + + + + F +++ Q + + L+++ Sbjct: 239 VSLRPTSLSISGLYH-YISFLRETGQDVSRFELTFWRKIFQPVSVGVMMLLALSFIFG-- 295 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHK--IEQNPYYIPILYLFLFCISSIFLLMIK 355 +R I + + F + + + P L L I I+ L+ + Sbjct: 296 SLRSVTAGARIVTGICVGFLFYVVNEILGQTSVVYGIPAIFGALIPSLLFIVMIWWLLSR 355 Query: 356 KK 357 K+ Sbjct: 356 KR 357 >gi|37681089|ref|NP_935698.1| permease [Vibrio vulnificus YJ016] gi|320155253|ref|YP_004187632.1| putative Permease [Vibrio vulnificus MO6-24/O] gi|326423844|ref|NP_760390.2| lipopolysaccharide ABC transporter permease [Vibrio vulnificus CMCP6] gi|37199839|dbj|BAC95669.1| predicted permease [Vibrio vulnificus YJ016] gi|319930565|gb|ADV85429.1| predicted Permease [Vibrio vulnificus MO6-24/O] gi|319999214|gb|AAO09917.2| putative membrane protein [Vibrio vulnificus CMCP6] Length = 357 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 58/362 (16%), Positives = 137/362 (37%), Gaps = 17/362 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +LYI R I + + + V ++ +I+ ++++ V T L L IP + Sbjct: 3 KILDLYIGRTIVATTSLVLVTFVGLSGIIKYVEQLRKVGKGTYDLLHALYFVLLSIPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++ + VL A+ L + + Sbjct: 63 EMFFPMAALLGALIGLGMLASSSELVVMQAAGFSKLDIGVSVLKTAVPLMLVVMALGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + L + A + + ++ + +D +I I K + + ++ Sbjct: 123 APDAQKMARDLRSFALSGGSIVSVRSGVWAKDAND-FIFIGKVDEDKLYGLNMWKFDQNK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSY-----TLQTESANSS 236 + + +A+ D + ++ + + +D ++ S + Sbjct: 182 KLQSVIFAEEVDYQQDNRWLM-----RYVQITDMQDEKVISKHSLEQMEWETSLAPDKLA 236 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAAD 294 + +K + +LS L + + Y F ++LTQ + + L++ V Sbjct: 237 VVTVKPEELSLSGLYD-YVTYLKASEQDASRYELAFWRKLTQPISIAVMMLMALSFVFGP 295 Query: 295 KRALVRQRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 R++ + I + + F+G +++ I P + + +F I ++ LL Sbjct: 296 LRSVTMGARVISGVIAGFAFYISSEFFGPLTLVYGIP--PVFGAVAPSIVFFIVAVMLLN 353 Query: 354 IK 355 K Sbjct: 354 RK 355 >gi|326799922|ref|YP_004317741.1| permease YjgP/YjgQ family protein [Sphingobacterium sp. 21] gi|326550686|gb|ADZ79071.1| permease YjgP/YjgQ family protein [Sphingobacterium sp. 21] Length = 358 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 46/345 (13%), Positives = 124/345 (35%), Gaps = 7/345 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 M + YI++ +F+ + +A + I +R++ + L+ I+ + IP Sbjct: 1 MNIIDKYIIKKYLGTFVFTMAIFTVVAVIFDISERMDDFLKNHAPLSKIVFEYYAGFIPF 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 L ++P + M TE++ I N G S ++P A ++ + I Sbjct: 61 YLNFLSPLINFIAVIFFTAKMADQTEIVPILNGGMSFRRFLRPYFIAASIICLVTLIFNI 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS- 178 I P+ +K + + + + ++D + ++ I ++ + + FI+++ Sbjct: 121 YIIPRTN-KLKIGFENIYVKPIDNNSKSSTHMQIDKNSFVYIDNFDNDRKVGYNFILETF 179 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + + A + D + + + + + +++ + K TL + Sbjct: 180 KGQELQEKLIADRITWDSVKNNWKIENYTIRIVNGLNEKMIKGTSKDTTLDMSPRDFEIR 239 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 L + + E +KR ++P +++++ + Sbjct: 240 DNVFMAMTTQELNENIEKEKIRGTGRMTDLKLEKYKRF---IYPFSAYILTLMGVSLSSK 296 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 + + + +++SF + F + P+L F+ Sbjct: 297 KVRGGIGLSLGVGIALSF-TYILFIQFANMFSLKGGLPPLLAAFI 340 >gi|254468135|ref|ZP_05081541.1| permease YjgP/YjgQ [beta proteobacterium KB13] gi|207086945|gb|EDZ64228.1| permease YjgP/YjgQ [beta proteobacterium KB13] Length = 368 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 49/342 (14%), Positives = 123/342 (35%), Gaps = 15/342 (4%) Query: 17 LMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNV 76 L + L + I + + L S + +L I + + LP++ + Sbjct: 16 LSTILILSGIVVAQRGVVVFRLASKGIIPNDSILTILVFSLIKYLPILLTLTLFLTILLT 75 Query: 77 LTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKA 136 L+ R++E++I ++G + I+P+LF ++ + + + + P ++ A Sbjct: 76 LSRWFRDSEMMIWFSSGLGLTSFIRPILFFSLPIILLIGFLSLYLSPWATQKSEEYKAGL 135 Query: 137 QLALTFSYLEENLFFRL-DDDLYIKISKYNP-NNTLQGIFIVDSRDTQTHKIYYAQSGSI 194 + + + F D + + + ++ +F+ ++ + I + + Sbjct: 136 KNRDELATISPGSFKESKSKDRVFYVEGFGDLGSKVKNVFVQSEQNGKLGIIVSNEGSRV 195 Query: 195 DLD---RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLL 251 + I+L G+ + + + + + +KF Y E I + + + LL Sbjct: 196 STSTDKDEYIVLKKGKRYEVNHENNNFTEIKFNDYGFLVERKLPPIIDVNQVEAMPTALL 255 Query: 252 NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFIS 311 +EF R++ L ++ +++I + + I + Sbjct: 256 ---------LLTNTNREIAEFVWRVSLPLSGIVLIILAIPLSFINPRSGRSANIIIAIMI 306 Query: 312 LSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 +I + I+ + NPY + + + IS LM Sbjct: 307 FAIYNNLMGVTQSYINLGKLNPYVGGAI-VHVLIISIASYLM 347 >gi|120599781|ref|YP_964355.1| permease YjgP/YjgQ family protein [Shewanella sp. W3-18-1] gi|146292283|ref|YP_001182707.1| permease YjgP/YjgQ family protein [Shewanella putrefaciens CN-32] gi|120559874|gb|ABM25801.1| permease YjgP/YjgQ family protein [Shewanella sp. W3-18-1] gi|145563973|gb|ABP74908.1| permease YjgP/YjgQ family protein [Shewanella putrefaciens CN-32] gi|319425583|gb|ADV53657.1| inner membrane component of lipopolysaccharide transporter, LptG [Shewanella putrefaciens 200] Length = 352 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 58/364 (15%), Positives = 132/364 (36%), Gaps = 21/364 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK +LYI R I + + L + ++ +I+ + ++ LV T ++ +LIP Sbjct: 1 MKILDLYIARVILSTSALCLLVLTGLSGIIKWVDQLRLVGRGTYTMMDAGIYVLFLIPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + + N+EL+++ +G SR+ + + A+ L + + Sbjct: 61 IEMFFPMAVLLGALIGMGMLASNSELVVMQVSGLSRLQITLSAMKTAVPLMLMVMALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SR 179 P +L A +L+ + D DL++ I + L I + + Sbjct: 121 GAPVAEQKANELQA-IKLSGGSLIKSHRGIWAKDGDLFVNIGEVENITKLNNITLYKFNS 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + K+ +A+ D + L D + + + ++ + S + Sbjct: 180 ELKLTKVVHAERAVFTRD--SWRLFDVKRTDLTYDQVTLEHLEEDIWQSSLTPDKLSVVS 237 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 +K ++ LL + + Y ++L Q + + L+++ Sbjct: 238 VKPEALSIQGLLG-YLDYLKTNSQDPSRYELALGRKLMQPVTVGVMMLVALSFVFGP--- 293 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHK--------IEQNPYYIPILYLFLFCISSIFL 351 + + + + GV GFS+ I + + P Y+ + L F Sbjct: 294 -----LRTVTMGARVLLGVVAGFSFYISNEIFGPMSIVYELPAYVGAMAPSLLFTGIAFY 348 Query: 352 LMIK 355 + + Sbjct: 349 FIRR 352 >gi|301170458|emb|CBW30065.1| conserved inner membrane protein [Haemophilus influenzae 10810] Length = 358 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 57/362 (15%), Positives = 138/362 (38%), Gaps = 11/362 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + + YI + I + + + +V ++ +I+ +++ V T + + +G IP Sbjct: 2 INTLDRYIGKSILGAIFATLMTLVGLSAIIKFVEQFRSVGKGTYDIWQAVIFTGLTIPKD 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ +EL+I+ + G SR + V+ A+ L +F I Sbjct: 62 IETFFPMAALLGALIALGNLASRSELVIMQSAGFSRFKIGIAVMKTALPLVVFTMIIGEW 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SR 179 P+ + + AKA + ++ ++ + D ++ + + + L I+I + Sbjct: 122 GIPQTEQFARDMRAKALSGGSILSIKNGVWAK-DGHHFVFVRRVTDDTKLDDIYIYTFDQ 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS--T 237 K+ +A S D L +V+ + ++I S T +T Sbjct: 181 QHNLIKLKHANQASYSEDEAKWTLR--QVNHSTITKEEIITTNHLSETWETSLTPDKLGA 238 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L+ ++S L + + + + + F +++ Q + + L+++ Sbjct: 239 VSLRPTSLSISGLYH-YISFLRETGQDVSRFELTFWRKIFQPVSVGVMMLLALSFIFG-- 295 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHK--IEQNPYYIPILYLFLFCISSIFLLMIK 355 +R I + + F + + + P L L I I+ L+ + Sbjct: 296 SLRSVTAGARIVTGICVGFLFYVVNEILGQTSVVYGIPAIFGALIPSLLFIVMIWWLLSR 355 Query: 356 KK 357 K+ Sbjct: 356 KR 357 >gi|309972901|gb|ADO96102.1| Lipopolysaccharide export permease, LptG [Haemophilus influenzae R2846] Length = 358 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 56/362 (15%), Positives = 138/362 (38%), Gaps = 11/362 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + + YI + I + + + +V ++ +I+ +++ V T + + +G +P Sbjct: 2 INTLDRYIGKSILGAIFATLMTLVGLSAIIKFVEQFRSVGKGTYDIWQAVIFTGLTMPKD 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ +EL+I+ + G SR + V+ A+ L +F I Sbjct: 62 IETFFPMAALLGALIALGNLASRSELVIMQSAGFSRFKIGIAVMKTALPLVVFTMIIGEW 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SR 179 P+ + + AKA + + ++ ++ + D ++ + + + L I+I + Sbjct: 122 GIPQTEQFARDMRAKALSSGSILSIKNGVWAK-DGHHFVFVRRVTDDTKLDDIYIYTFDQ 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS--T 237 K+ +A S D L +V+ + +I S T +T Sbjct: 181 QHNLIKLKHANQASYSEDEAKWTLR--QVNHSTITKDEIITTNHLSETWETSLTPDKLGA 238 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L+ ++S L + + + + + F +++ Q + + L+++ Sbjct: 239 VSLRPTSLSISGLYH-YISFLRETGQDVSRFELTFWRKIFQPVSVGVMMLLALSFIFG-- 295 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHK--IEQNPYYIPILYLFLFCISSIFLLMIK 355 +R I + + F + + + P L L I I+ L+ + Sbjct: 296 SLRSVTAGARIVTGICVGFLFYVVNEILGQTSVVYGIPAIFGALIPSLLFIVMIWWLLSR 355 Query: 356 KK 357 K+ Sbjct: 356 KR 357 >gi|254360523|ref|ZP_04976672.1| possible inner membrane protein [Mannheimia haemolytica PHL213] gi|153091063|gb|EDN73068.1| possible inner membrane protein [Mannheimia haemolytica PHL213] Length = 365 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 54/368 (14%), Positives = 128/368 (34%), Gaps = 22/368 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E YI + I + ++ ++ + +I+ ++ V + + IP Sbjct: 6 MNILERYIGKTILSAIFLTLFMLIGLGAIIKFVEEFRDVGRGSYDGLKAAYYTFLTIPRD 65 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + L ++ +EL+++ +G SR + V+ A+ L IF I Sbjct: 66 IETFFPIAALLGSLLGLGNLASLSELVVMQASGFSRFRIGLAVMKTALPLVIFTMIIGEW 125 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD--- 177 P+ + + + AQ + ++ F+ D + +I I+ +L + I Sbjct: 126 GVPQTEQFARNMRSIAQSGGSMLATKDG-FWAKDGNSFIYINHIKNEKSLDNVLIYQFGE 184 Query: 178 -SRDTQTHKIYYAQSGSIDLDRQAIILND------GEVHRKSPISKDISIMKFKSYTLQT 230 + + A++ + D + +L+ GE + D + + Sbjct: 185 GQNKRELQSVLKARTANY-SDEKGWVLSKVEKSTVGENQIQQAKQPD------QVWQTSL 237 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 + + LK ++S L + + + + F +++ Q + + L++I Sbjct: 238 TPSKLGIVSLKPESLSISGLAD-YVGFLKDTGQDPKRFEITFWRKVFQPISMAVMMLLAI 296 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY-IPILYLFLFCISSI 349 +R I I + F + + + IP+ L + I Sbjct: 297 SFIFGP--LRSSTMGAKIVIGIVAGFMFYVANIVFGNLSLIATWLPIPVGALIPSLLCLI 354 Query: 350 FLLMIKKK 357 + + K Sbjct: 355 IVWWLLSK 362 >gi|330811513|ref|YP_004355975.1| permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379621|gb|AEA70971.1| Putative permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 353 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 58/362 (16%), Positives = 125/362 (34%), Gaps = 16/362 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + L I+ +A + + ++ V S T +L + P Sbjct: 1 MVKLDRYIGSSVFMAILAVLGIILGLATLFAFIDEMSDV-SDTYTLTDVASYVLLTAPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L S+ N+EL I+ G S ++ V+ ++L + + Sbjct: 60 LYDMLPMAALIGCLIGLGSLASNSELTIMRAAGVSIGRIVWAVMKPMLVLMLVGVLIGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF---IVD 177 I P +T + + AQ + L+ D +I I+ PN L G+ D Sbjct: 120 IAPATENTAQANRSLAQGGGDAQSAKHGLW-HRQGDEFIHINSVQPNGILYGVTRYRFDD 178 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 R + +A+ + D L+D ++ + + + ST Sbjct: 179 QRHMLSSS--FAKRANFAEDH--WQLSDVTTTLFHDKRTEVVAAPQERWDVSISPQLLST 234 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWL--FPVIFGLISIVAADK 295 +V+ +++ L + + Y F ++ Q L ++ IS + Sbjct: 235 VVMAPESLSITGL-WGYIHYLADQGLNNGRYWLAFWVKVLQPLVTAALVLMAISFIFGPL 293 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 R++ ++ +F + + F + + L I ++ L + Sbjct: 294 RSVTLGQR----VFTGVLVGFTFRIAQDLLGPSSLVFGFSPLFAVLVPAGICALAGLWLL 349 Query: 356 KK 357 ++ Sbjct: 350 RR 351 >gi|291614864|ref|YP_003525021.1| permease YjgP/YjgQ family protein [Sideroxydans lithotrophicus ES-1] gi|291584976|gb|ADE12634.1| permease YjgP/YjgQ family protein [Sideroxydans lithotrophicus ES-1] Length = 358 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 55/365 (15%), Positives = 128/365 (35%), Gaps = 14/365 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ Y+ R I S + ++ + ++ ++ +N + L +L IP Sbjct: 1 MRLLTRYLRREIYASVALVFAALIMLFALLDLVNELNSMGRGDYRLGYVLLFVTLTIPGH 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + T L M ++EL + ++G S +I ++ + + L + F+ + Sbjct: 61 IYELFPVAVLIGTIFALVQMAASSELTVYRSSGVSLKQMIVMLVKIGLPLVVLCFLFGEV 120 Query: 121 IEPKCRSTIKQLSAKAQL-ALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 I P ++L KAQ ++ ++ + D+ +I + P+ +L + I + Sbjct: 121 IAPPSERMAQELRMKAQNLKVSVKEFRSGVWAK-DERSFINVRSMLPDTSLLDVSIYEFD 179 Query: 180 DT-QTHKIYYAQSG-SIDLDRQAIILNDGEVHR-KSPISKDISIMKFKSYTLQTESANSS 236 T I A+ +D DR + DG S + S Sbjct: 180 ATYHLRSITSAEHASYLDEDRWQL---DGVRQTLFSKQGATTDNRPRAEWHTSLNPDILS 236 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 +++ + L + + Y +L L ++ L+++ + + Sbjct: 237 VLLVVPEQMSAWNLYQYTMH-LRENHQKTSRYEIAMWNKLVYPLAVLVMMLLALPFSAYQ 295 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN---PYYIPILYLFLFCISSIFLLM 353 R+ IF+ + + + + N P +LF ++ +L Sbjct: 296 R--REGGISGKIFMGIVLGLSFHFVGRLFANVGALNDWSPLLSATAMSWLFLALAMGMLW 353 Query: 354 IKKKY 358 ++ Sbjct: 354 RTERR 358 >gi|237744435|ref|ZP_04574916.1| conserved hypothetical protein [Fusobacterium sp. 7_1] gi|229431664|gb|EEO41876.1| conserved hypothetical protein [Fusobacterium sp. 7_1] Length = 363 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 53/368 (14%), Positives = 124/368 (33%), Gaps = 21/368 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K ++Y+ + + FLM+ + + + + Q + I ++ +L L+P + Sbjct: 2 IKKMDIYVSKYFIKFFLMNIIGFMGVFLLAQTFKIIKYINQGKLVGGEILDYILNLLPKM 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 P + ++ M N E++ + +G + +++ L +A ++S+ +F N Sbjct: 62 FVETAPLSVLLAGLITISIMASNLEIVSLKTSGIRFLRIVRAPLIIAFVISLIVFFINNS 121 Query: 121 IEPKCRSTIK-QLSAKAQLALTFSYLEENL-FFRLDDDLYIKISKYN-PNNTLQGI---- 173 I K + I + +L +EN F D + + N + I Sbjct: 122 IYTKSLAKINFYRRGEVDESLKLPTTKENAFFINNADGYLYLMGEINRETGVAENIEVVK 181 Query: 174 FIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 F + + I A+S D + I ++ ++ + Y Sbjct: 182 FETEISKPKE--IITAKSAKFDTEENKWIFSNVNIYNVDTK----ETITKTEYKSDLYKD 235 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYR---PELLETYRSEFHKRLTQWLFPVIFGLISI 290 + S+ + + + + + E Y SE K+ + I I + Sbjct: 236 DPSSFIRASAEDPRMLTIKELKKTIKEQKSIGEDTRIYLSELAKKYSFPFASFIVAFIGL 295 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISS 348 VR + + I + +G + S + N P + ++ Sbjct: 296 SV--SSKYVRGGRTTMNLVICVIAGYGYYLV-SGAFEAMSLNGILNPFIASWIPNILYLI 352 Query: 349 IFLLMIKK 356 I + + + Sbjct: 353 IGIYFMNR 360 >gi|218778208|ref|YP_002429526.1| permease YjgP/YjgQ family protein [Desulfatibacillum alkenivorans AK-01] gi|218759592|gb|ACL02058.1| permease YjgP/YjgQ family protein [Desulfatibacillum alkenivorans AK-01] Length = 353 Score = 106 bits (266), Expect = 5e-21, Method: Composition-based stats. Identities = 64/347 (18%), Positives = 125/347 (36%), Gaps = 17/347 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YI R + ++ L +V I + ++I+ ++ L + IP V Sbjct: 1 MKIISKYIARALFKNLLTILFAVVVIYVAVDFFEKIDDFMAAKIPLLTVGYFFLLRIPYV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 V P + V+ M R+ E++ + G S +L+KP+ + ++ S+FLF I Sbjct: 61 AAQVLPVGVLLSAMVVIGLMARHNEIIAYASGGGSSFSLLKPIAVMGVIASLFLFAFNEI 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 I P + Q+ + F R + L ++ KY P +T + I + Sbjct: 121 IVPAAAAEANQIWYQDVRKEGDVGTRTTWFHR--NGLIGRVDKYIPETHTARDITLN-YY 177 Query: 180 DTQTHKI--YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 D I A +I L + S + DI K + + Sbjct: 178 DPSFKLIKRIDADDATI--SGTVWTLRNAM-ESVSGRASDIRQHKELKVEMDFTADQLHD 234 Query: 238 IVLKANDQNLSFLLN--PNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 V ++++ +L L + Y+ +R + +++ L +I ++ A Sbjct: 235 RVKRSDEMSLVQLKEHIHKIESEGYKAV---RFRVDLASKISFPLVCLIMSVLG--GAMA 289 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 R I + + ++F +W + + Y PI + Sbjct: 290 LRGKRGEGLAVNIVMGMGLAFA-YWVVHSLCLSLGYAGMYSPIFSAW 335 >gi|152978628|ref|YP_001344257.1| permease YjgP/YjgQ family protein [Actinobacillus succinogenes 130Z] gi|150840351|gb|ABR74322.1| permease YjgP/YjgQ family protein [Actinobacillus succinogenes 130Z] Length = 354 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 53/360 (14%), Positives = 143/360 (39%), Gaps = 11/360 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + E YI + I + + L +V ++ +I+ +++ V T + + IP Sbjct: 1 MNTLERYIGKSILGTIFATLLTLVGLSAIIKFVEQFRSVGKGTYDSLQAVLYTILTIPKD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ +EL+++ + G SR+ + V+ AI L + + Sbjct: 61 VETFFPMAALLGALIALGNLASRSELIVMQSAGFSRLKIGIAVMKTAIPLVLITMVIGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + + AKA + ++ +++ + +D +I + + + L+ ++I + Sbjct: 121 GIPQTEQYARDMRAKAISGGSLMSVKNSVWAKDGND-FIFVRQVREDANLRDVYIYHFDN 179 Query: 181 TQTHKIYYAQSGSIDLDRQAII-LNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 Q ++ +A S + + + + LN ++ + +K+ ++K+ + Sbjct: 180 RQLQRLSHANSATYERGKWQLHQLNVSDIQAEQIFTKNYVSQEWKT---SLTPDKLGIVS 236 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L+ ++S L + + + + + + ++L Q + + ++++ + Sbjct: 237 LRPTSLSISGL-SEYIAFLHQTGQDSKKFELTYWRKLFQPISVGVMMMLALSFIFGP--L 293 Query: 300 RQRKKIHPIFISLSISFGVFW---GFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R I + F + F + P ++ LF + + +LL K+ Sbjct: 294 RSVTAGARIVTGICFGFLFYVINEIFGPLSLVYNVTPIVGALMPSILFLVITWWLLSRKR 353 >gi|86141356|ref|ZP_01059902.1| putative membrane protein [Leeuwenhoekiella blandensis MED217] gi|85831915|gb|EAQ50370.1| putative membrane protein [Leeuwenhoekiella blandensis MED217] Length = 358 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 57/363 (15%), Positives = 139/363 (38%), Gaps = 11/363 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL+ +F+ L + I + + ++I+ + ++ + Sbjct: 1 MKILDWYILKRYLGTFITMLLLFIPIGITVNLAEKIDKMLANEVPFVEIALYYLDFTIYF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + + + NTE++ ++G S ++P L A ++ + +I Sbjct: 61 ANLLFPLFLFLSVIWFTSKLANNTEVIAFLSSGVSFYRFLRPYLIGATIVCVGAYILGTY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF-IVDSR 179 + P + + + + N++ +++D+ YI +S++ P++ + F + Sbjct: 121 LAPAASQGFNEFTYEYLKNGKAARETRNVYRQINDNDYIYVSRFTPSSKMGQNFTLEHFE 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK-SYTLQTESANSSTI 238 + A+S + L +G R DI I + K + + + + Sbjct: 181 NNTLQYKIQARSIVYRPEDTLYRL-NGYKKRIVGKEGDILISEPKLDTLFSFDLEDLTPL 239 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 A L + Y +KR + + I +I++ ++ Sbjct: 240 EYIAETLTTPRLREFIDKERARGSSAINRYEVVLYKRYSLPVSAYILTIIAVAV---SSM 296 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF----LFCISSIFLLMI 354 R+ + + +S++F +F F + I + + P++ ++ LF I +I+LL Sbjct: 297 KRRGGMGINLALGISLAF-IFIFFDKVFGTISEQSDFSPMVAVWLPNVLFGILAIYLLNR 355 Query: 355 KKK 357 K+ Sbjct: 356 AKR 358 >gi|239993539|ref|ZP_04714063.1| predicted permease [Alteromonas macleodii ATCC 27126] Length = 353 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 47/355 (13%), Positives = 133/355 (37%), Gaps = 5/355 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +LYI R + + ++ ++ ++ +I+ ++++ + + + + L Sbjct: 3 KILDLYIARTLLGTITVTLSVLIGLSALIKFVEQLRKIGEGDYDMLVAFIYVLLSLARDL 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + + + N+EL+++ G SR +I + +++ + + + Sbjct: 63 EQFFPMATLLGGLIGMGVLASNSELVVMQAAGMSRWNIINSAMKSTLVMILLVMAVGEWV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SRD 180 P + KQ+ +A + + L + D D ++ I + ++L+ + I + D Sbjct: 123 TPYSETKAKQIRTEAISG-GSLFSSDKLVWAKDGDRFVSIGQVLSQDSLKDVSIFSFNPD 181 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 I +A++G+ D D L+D EV + + + + + + + Sbjct: 182 LSLESITHAKNGAFDGD--GWWLSDVEVTKFTETNVTVDENNRMRWNSTLTPDKLGIVAV 239 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K +++ LL+ N + Y+ +++ Q + + L+++ Sbjct: 240 KPEALSITGLLD-YVNYLENNDQDPSRYQLALWRKVFQPISVGVMLLMALSFIFGPLRSV 298 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + F + + + Q P ++ L L + +++ + Sbjct: 299 TMGARVIMGVLTGFGFFILNEVFGPVSLVYQLPPFLGALLPSLLFAAIAGVMLRR 353 >gi|124009520|ref|ZP_01694195.1| putative permease, YjgP/YjgQ family [Microscilla marina ATCC 23134] gi|123984866|gb|EAY24834.1| putative permease, YjgP/YjgQ family [Microscilla marina ATCC 23134] Length = 371 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 60/374 (16%), Positives = 145/374 (38%), Gaps = 25/374 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 +K + YIL+ +F + ++ I +I I ++I + +++ I K IP Sbjct: 2 LKRLDKYILKKFLVTFFFVVIILISIIVIIDITEKIGDFNKMDQTVWQIFTKYYLNFIPY 61 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++P + T V + +TE++ I ++G S ++ P L + L+++ F Sbjct: 62 WANSLSPILIFIATVFVTARLATHTEIIAILSSGVSFKRMLVPYLLGSSLIAVLTFYLIG 121 Query: 120 IIEPKCRS-TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN------TLQG 172 + PK +K + + F+ N+ ++ + + I Y+ + TL+ Sbjct: 122 WVIPKANRVRLKFENTHIKDKFYFTDR--NVHLKIAPNTFAYIESYDNTSHVGYKFTLEN 179 Query: 173 I--FIVD--SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-DISIMKFKSYT 227 I F D + + + + D DR+ ++ + ++ + + I +S Sbjct: 180 ISGFEYDGKRQQKKLNSKVECRRILWDKDRKKWVMENYKITEFNRGDSLNYKITYGQSLD 239 Query: 228 --LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIF 285 + + ++ + + L LETY E ++R+ +I Sbjct: 240 TLMNLKPSDFESKYMFNEQLTSDQLEAYIAELKQRGVGKLETYLVERYERMAYPFAVIIL 299 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFG-VFWGFSYIIHKIEQNPYYIPILYLFL- 343 +I ++ R+ ++ + I++ ++ + I +N P++ ++ Sbjct: 300 TVIGVIV-----SSRKTREGAGLQIAVGFGLAFIYVMLIMVSRSIGKNGELPPLVAAWMP 354 Query: 344 -FCISSIFLLMIKK 356 + I L+M K+ Sbjct: 355 NILFALIGLIMYKR 368 >gi|313206715|ref|YP_004045892.1| permease yjgp/yjgq family protein [Riemerella anatipestifer DSM 15868] gi|312446031|gb|ADQ82386.1| permease YjgP/YjgQ family protein [Riemerella anatipestifer DSM 15868] gi|315023785|gb|EFT36787.1| hypothetical protein RAYM_00180 [Riemerella anatipestifer RA-YM] gi|325335845|gb|ADZ12119.1| permease YjgP/YjgQ family protein [Riemerella anatipestifer RA-GD] Length = 364 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 52/378 (13%), Positives = 126/378 (33%), Gaps = 38/378 (10%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILL-KISGYLIPT 59 MK + YI++ + + + + I V+ I + + S ++ L + + Sbjct: 1 MKIIDAYIIKKFLGTLVFMLVLLSIIVIVVDIQAKAPNIEKSGYTVGDFLLHFYPFWMIY 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ + + M NTE++ I ++G S +P +A+ +++F+ + + Sbjct: 61 LILTFMSILVFISVIYFSSRMADNTEIVAIVSSGASFHRFARPYFMVAVGIALFMLMLNH 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI-VDS 178 P +L E+ + + + + IS +FI Sbjct: 121 FALPWANVKKNELM----------VFTESQVRQEEKNRSVAISAQMSPTEY--VFIGSYH 168 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSY--------TLQT 230 R Y Q D + + I G+ + SI F L Sbjct: 169 RKEARGSDYLYQK--FDKNNKLIHQIRGDYVSWDEKKQAFSITSFYEKKAGKNETEKLSN 226 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRP----------ELLETYRSEFHKRLTQWL 280 + + + LL N P + TY +E H R + + Sbjct: 227 GTQTYQSFGYPPEELFPDELLGENKTTPELVKFINREKIKGNGNINTYLNELHARTSMPV 286 Query: 281 FPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYI-IHKIEQNPYYIPIL 339 +I ++ + A + ++ + + ++++F + F + + + + Sbjct: 287 SIIILTILGLALA---SEKKRGGIGVNLAVGIALAFVFIFSFEALKVVSSSKILTPFVAM 343 Query: 340 YLFLFCISSIFLLMIKKK 357 ++ F + + LL+ ++ Sbjct: 344 WMPNFVFAPLALLLYFRR 361 >gi|298207835|ref|YP_003716014.1| hypothetical protein CA2559_06260 [Croceibacter atlanticus HTCC2559] gi|83850473|gb|EAP88341.1| hypothetical protein CA2559_06260 [Croceibacter atlanticus HTCC2559] Length = 456 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 38/232 (16%), Positives = 89/232 (38%), Gaps = 17/232 (7%) Query: 28 WVIQILQR-INLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTEL 86 ++Q + I+ ++ I+LK+ ++ P ++P+V P + + + N E Sbjct: 1 MILQSVWLYISELAGRELDGFIILKLLSFVAPKLIPLVLPLTILVTSIMTFGNFAENYEF 60 Query: 87 LIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLE 146 + ++G S ++ ++ LSI F N + P+ L + + Sbjct: 61 AAMKSSGISLQRAMRGLIIFIAALSITAFFFANNVIPRAEFEFVNLRKNIAKLKPAAAIS 120 Query: 147 ENLFFRLDDDLYIKISKYNPNNT--LQGIFIVDSRD--TQTHKIYYAQSGSIDLDRQ--- 199 E +F + D + IK+ + + + L + I + + + A G + Sbjct: 121 EGMFNEIGD-INIKVGEKSGDRGQYLTDVIIHKKNEKRAGNYTVIKANKGELISSEGSDV 179 Query: 200 -AIILNDG----EVHRKSP---ISKDISIMKFKSYTLQTESANSSTIVLKAN 243 +++L DG E+ P K + FK Y + + + + + ++ Sbjct: 180 LSLVLRDGNYYDEIQSNDPKEIQKKPFAKSYFKEYAINVDLSTLNNVDMEDR 231 >gi|148827126|ref|YP_001291879.1| permease [Haemophilus influenzae PittGG] gi|148718368|gb|ABQ99495.1| predicted permease [Haemophilus influenzae PittGG] Length = 358 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 56/362 (15%), Positives = 137/362 (37%), Gaps = 11/362 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + + YI + I + + + +V ++ +I+ +++ V T + + +G +P Sbjct: 2 INTLDRYIGKSILGAIFATLMTLVGLSAIIKFVEQFRSVGKGTYDIWQAVIFTGLTMPKD 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ +EL+I+ + G SR + V+ A+ L +F I Sbjct: 62 IETFFPMAALLGALIALGNLASRSELVIMQSAGFSRFKIGIAVMKTALPLVVFTMIIGEW 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SR 179 P+ + + AKA + ++ ++ + D ++ + + + L I+I + Sbjct: 122 GIPQTEQFARDMRAKALSGGSILSIKNGVWAK-DGHHFVFVRRVTDDTKLDDIYIYTFDQ 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS--T 237 K+ +A S D L +V+ + +I S T +T Sbjct: 181 QHNLIKLKHANQASYSEDEAKWTLR--QVNHSTITKDEIITTNHLSETWETSLTPDKLGA 238 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L+ ++S L + + + + + F +++ Q + + L+++ Sbjct: 239 VSLRPTSLSISGLYH-YISFLRETGQDVSRFELTFWRKIFQPVSVGVMMLLALSFIFG-- 295 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHK--IEQNPYYIPILYLFLFCISSIFLLMIK 355 +R I + + F + + + P L L I I+ L+ + Sbjct: 296 SLRSVTAGARIVTGICVGFLFYVVNEILGQTSVVYGIPAIFGALIPSLLFIVMIWWLLSR 355 Query: 356 KK 357 K+ Sbjct: 356 KR 357 >gi|332142604|ref|YP_004428342.1| lipopolysaccharide ABC transporter permease [Alteromonas macleodii str. 'Deep ecotype'] gi|327552626|gb|AEA99344.1| lipopolysaccharide ABC transporter permease [Alteromonas macleodii str. 'Deep ecotype'] Length = 353 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 48/355 (13%), Positives = 132/355 (37%), Gaps = 5/355 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +LYI R + + ++ ++ ++ +I+ ++++ + + +P L Sbjct: 3 KILDLYIARTLLSTITVTLSVLIGLSALIKFVEQLRKIGEGDYDMLAAFIYVLLSLPRDL 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + + + N+EL+++ G SR +I + +++ + + + Sbjct: 63 EQFFPMATLLGGLIGMGVLASNSELVVMQAAGMSRWNIINSAMKSTLVMILAVMAVGEWV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SRD 180 P + KQL +A + + L + D D ++ I + ++L+ + I + + D Sbjct: 123 TPFSETKAKQLRTEAISG-GSLFSSDKLVWAKDGDRFVSIGQVISQDSLKDVSIFNFNSD 181 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 I YA++ + D D L++ EV + + + + + + Sbjct: 182 LSLQSITYAKNSTYDGD--GWWLSNVEVTQFTETQVSVDDTDRMRWNSTLTPDKLGIVAV 239 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K +++ LL+ N + + Y +++ Q + + L+++ Sbjct: 240 KPEALSITGLLD-YVNYLDNNDQDPSRYELALWRKIFQPISVGVMLLMALSFIFGPLRSV 298 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + F + + + Q P ++ L L + +++ + Sbjct: 299 TMGARVIMGVLTGFGFFILNEVFGPVSLVYQLPPFLGALLPSLLFAAVAGVMLRR 353 >gi|258625834|ref|ZP_05720713.1| Predicted permease [Vibrio mimicus VM603] gi|258582072|gb|EEW06942.1| Predicted permease [Vibrio mimicus VM603] Length = 356 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 53/358 (14%), Positives = 134/358 (37%), Gaps = 8/358 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I + + + V ++ +I+ ++++ V + L L IP + Sbjct: 3 KILDWYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGEGSYDLLQALLFVVLSIPRDV 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L ++ ++EL+++ G S++ + VL AI L I + + Sbjct: 63 EMFFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIVVTLLGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + + A A + ++ R +D +I I K + + Sbjct: 123 APQAQKLARDMRAFATSGGAIMSVRTGVWARDAND-FIFIGKVDNEQLIGMNLWRFDEHK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHR-KSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + +A+ + + ++ D ++ R + I + + + + + Sbjct: 182 KLSTVIFAEQVYYVGNNE-WLMKDAQLTRMVNEIEISKETLPEYRWRTSLAPDKLAVVTV 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADKRAL 298 K + +LS L + + + Y F +++TQ + + L++ + R++ Sbjct: 241 KPEELSLSGLSD-YVHYLKASEQDSSRYELAFWRKMTQPISIAVMMLMALSFIFGPLRSV 299 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + + + F + F + + P + L ++ L+ +K Sbjct: 300 TMGARILSGVIAGFT--FYISSEFFGPLSLVYGLPPLFGAVAPSLVFLTIALGLLGRK 355 >gi|300114326|ref|YP_003760901.1| permease YjgP/YjgQ family protein [Nitrosococcus watsonii C-113] gi|299540263|gb|ADJ28580.1| permease YjgP/YjgQ family protein [Nitrosococcus watsonii C-113] Length = 354 Score = 106 bits (265), Expect = 6e-21, Method: Composition-based stats. Identities = 47/355 (13%), Positives = 114/355 (32%), Gaps = 4/355 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI + + L+ ++ + +Q + + V + L+ + Y IP Sbjct: 1 MKILDRYIAKAVISYTLLVLFILIALYTFLQFITELEDVGEGNYGVMGALRYTTYSIPQH 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + + L + +EL+ + G S + L ++ I + + Sbjct: 61 IYDLLPVAALLGSVLGLGYLAGQSELVAMRAAGFSVGRITLSALATGMIFVIATVLMGEV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + +L + A+ E+ F+ + + + + + PN + I I + D Sbjct: 121 VAPPAQQAANKLRSLAKTGHLSEDGEQG-FWSRNGNNFNHVGRVLPNGQYEYIEIFEF-D 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 Q Q+ + L D S ++ + +++ Sbjct: 179 NQRRLRIVTQATRAIYHKDGWHLYDVTQRLISTEGIITRRLEEALWESGLSPEMLDVVMV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + L + E Y+ F ++ +I ++I Sbjct: 239 DPQQLSAWGLYR-YIGYLQQSKQAAEQYQQAFWSKIVAPFSTLIMMFLAIPFIFGPLRSV 297 Query: 301 QRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + + + I F +F F+ + + +P+ L + +L Sbjct: 298 SVGQRILVGALVGIGFFLFNRLFNQLGLVFDFSPWLGAAFPSLLCLALGVVMLRR 352 >gi|229845238|ref|ZP_04465371.1| predicted permease [Haemophilus influenzae 6P18H1] gi|229811833|gb|EEP47529.1| predicted permease [Haemophilus influenzae 6P18H1] Length = 358 Score = 106 bits (265), Expect = 6e-21, Method: Composition-based stats. Identities = 48/360 (13%), Positives = 132/360 (36%), Gaps = 7/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + + YI + I + + + +V ++ VI+ +++ V T + + +G +P Sbjct: 2 INTLDRYIGKSILGAIFATLMTLVGLSAVIKFVEQFRSVGKGTYDIWQAVIFTGLTMPKD 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ +EL+++ + G SR + V+ A+ L +F I Sbjct: 62 IETFFPMAALLGALIALGNLASRSELVVMQSAGFSRFKIGMAVMKTALPLVVFTMIIGEW 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SR 179 P+ + + AKA + ++ ++ + ++ ++ + + + L I+I + Sbjct: 122 GIPQTEQFARDMRAKALSGGSILSIKNGVWAKDGNN-FVFVRRVTDDAKLDDIYIYTFDQ 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 ++ ++ S D L + + +++ + Sbjct: 181 QHNLTELKHSNQASYSEDEAKWTLRQVNHSTITKDEIITTNHLLETWETSLTPDKLGAVS 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L+ ++S L + + + + + F +++ Q + + L+++ + Sbjct: 241 LRPTSLSISGLYH-YISFLRETGQDVSRFELTFWRKIFQPISVGVMMLLALSFIFG--SL 297 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYII--HKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 R I + + F + + + P L L I I+ L+ K+ Sbjct: 298 RSVTAGARIVTGICVGFLFYVVNEILGQMSVVYGIPAIFGALIPSLLFIVMIWWLLSHKR 357 >gi|330938933|gb|EGH42432.1| permease YjgP/YjgQ [Pseudomonas syringae pv. pisi str. 1704B] Length = 302 Score = 106 bits (265), Expect = 6e-21, Method: Composition-based stats. Identities = 49/299 (16%), Positives = 103/299 (34%), Gaps = 10/299 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + + L I+ + + + + + S T +L L P Sbjct: 1 MVKLDRYIGKSVLLAILAVLGIILGLVSMFAFIDEMRDI-SDTYTLTDALSFVMLTAPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ ++EL I+ G S ++ V+ +LL I + Sbjct: 60 VYDTLPMAALIGCLIGLGTLASSSELTIMRAAGVSIGRIVWAVMKPMLLLMIAGVLVGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI---FIVD 177 + P + + + AQ + L+ D +I I+ PN + G+ D Sbjct: 120 VAPYAENQAQAARSLAQGSGDAQSARHGLW-HRQGDEFIHINTVQPNGLMLGVTRYHFDD 178 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 R T +A+ + D L D + S ++ + + + ST Sbjct: 179 QRHMLTSS--FAKEANFKTD--YWELKDVTTTHFNDGSTEVVNTPVERWDVALSPQLLST 234 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 +++ ++S L + + + Y F ++ Q V L++I Sbjct: 235 VIMPPESLSISGLWS-YAHYLADQGLSNGRYWLAFWTKVLQPAVTVALVLMAISFIFGP 292 >gi|260582801|ref|ZP_05850587.1| permease [Haemophilus influenzae NT127] gi|260094127|gb|EEW78029.1| permease [Haemophilus influenzae NT127] Length = 358 Score = 106 bits (265), Expect = 6e-21, Method: Composition-based stats. Identities = 57/362 (15%), Positives = 138/362 (38%), Gaps = 11/362 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + + YI + I + + + +V ++ +I+ +++ V T + + +G IP Sbjct: 2 INTLDRYIGKSILGAIFATLMTLVGLSAIIKFVEQFRSVGKGTYDIWQAVIFTGLTIPKD 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ +EL+I+ + G SR + V+ A+ L +F I Sbjct: 62 IETFFPMAALLGALIALGNLASRSELVIMQSAGFSRFKIGIAVMKTALPLVVFTMIIGEW 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SR 179 P+ + + AKA + ++ ++ + D ++ + + + L I+I + Sbjct: 122 GIPQTEQFARDMRAKALSGGSILSIKNGVWAK-DGHHFVFVRRVTDDTKLDDIYIYTFDQ 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS--T 237 K+ +A S D L +V+ + + +I S T +T Sbjct: 181 QHNLIKLKHANQASYSEDEAKWTLR--QVNHSTIMKDEIITTNHLSETWETSLTPDKLGA 238 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L+ ++S L + + + + + F +++ Q + + L+++ Sbjct: 239 VSLRPTSLSISGLYH-YISFLRETGQDVSRFELTFWRKIFQPVSVGVMMLLALSFIFG-- 295 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHK--IEQNPYYIPILYLFLFCISSIFLLMIK 355 +R I + + F + + + P L L I I+ L+ + Sbjct: 296 SLRSVTAGARIVTGICVGFLFYVVNEILGQTSVVYGIPAIFGALIPSLLFIVMIWWLLSR 355 Query: 356 KK 357 K+ Sbjct: 356 KR 357 >gi|323137915|ref|ZP_08072990.1| permease YjgP/YjgQ family protein [Methylocystis sp. ATCC 49242] gi|322396918|gb|EFX99444.1| permease YjgP/YjgQ family protein [Methylocystis sp. ATCC 49242] Length = 388 Score = 106 bits (265), Expect = 6e-21, Method: Composition-based stats. Identities = 47/287 (16%), Positives = 103/287 (35%), Gaps = 14/287 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFI-VFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + Y+ + +G L+ L + V + + Q + L+ I+ PTV Sbjct: 3 RLLFSYLFKRVGFGVLIVQLALSVPVVLSYLLYQLPPAAVRGGLVIPALVGIT----PTV 58 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + T + M + ++ S ++ +P L LA + + + N Sbjct: 59 AYVTLPMAVGVATALEFSRMASEGMIAVLYALRLSAWSICRPALTLAAGIVVLGYALANF 118 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNNTLQGIFIVDSR 179 I P + ++ + + +L L+ F+ D+ + + I ++ + +F+ Sbjct: 119 IAPHYATNMQDVLNVVRNSLNHRMLDAAHFYTFDNGVKTLYIERWVTPDLAANLFVRQLS 178 Query: 180 -DTQTHKIYYAQSGSIDLDRQAII--LNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + A + +I L++G + +S S D+ I F Y + S Sbjct: 179 IEKMQEETITAARAEFRRNESGVIVALSNGSIQTRSLSSGDVRIANFDEYAMALPMQGSG 238 Query: 237 TIVLKANDQNLSFL----LNPNPNNPNYRPELLETYRSEFHKRLTQW 279 + + + + L N + P L +R+E KR Sbjct: 239 GLPDR-GWRGVYELSAGAFLANYESAKGDPRQLGEWRAEAAKRFGVP 284 >gi|66044344|ref|YP_234185.1| permease YjgP/YjgQ [Pseudomonas syringae pv. syringae B728a] gi|63255051|gb|AAY36147.1| permease YjgP/YjgQ [Pseudomonas syringae pv. syringae B728a] gi|330969233|gb|EGH69299.1| permease YjgP/YjgQ [Pseudomonas syringae pv. aceris str. M302273PT] Length = 353 Score = 106 bits (265), Expect = 6e-21, Method: Composition-based stats. Identities = 49/324 (15%), Positives = 111/324 (34%), Gaps = 16/324 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLV--SSSTESLNILLKISGYLIP 58 M + YI + + + L I+ + + I+ + S T +L L P Sbjct: 1 MVKLDRYIGKSVLLAILAVLGIILGLV---SLFAFIDEMGDISDTYTLADALSYVMLTAP 57 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + P + L ++ ++EL I+ G S ++ V+ ++L I + Sbjct: 58 RRVYDTLPMAALIGCLIGLGTLASSSELTIMRAAGVSIGRIVWAVMKPMLVLMIAGVLVG 117 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF---I 175 + P + + + AQ + L+ D +I I+ PN + G+ Sbjct: 118 EYVAPYAENQAQAARSLAQGSGDAQSARHGLW-HRQGDEFIHINTVQPNGLMLGVTRYRF 176 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 D R QT +A+ + D L D + ++ + + + Sbjct: 177 DDQRHMQTSS--FAKEANFKTD--YWELKDVTTTHFNDGRTEVINTPVERWDVALSPQLL 232 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQW--LFPVIFGLISIVAA 293 ST+++ ++S L + + + Y F ++ Q ++ IS + Sbjct: 233 STVIMPPESLSISGLWS-YAHYLADQGLSNGRYWLAFWTKVLQPAVTVALVLMAISFIFG 291 Query: 294 DKRALVRQRKKIHPIFISLSISFG 317 R++ ++ + + + Sbjct: 292 PLRSVTLGQRVFTGVVVGFTFRII 315 >gi|145635440|ref|ZP_01791141.1| predicted permease [Haemophilus influenzae PittAA] gi|145641037|ref|ZP_01796618.1| predicted permease [Haemophilus influenzae R3021] gi|145267314|gb|EDK07317.1| predicted permease [Haemophilus influenzae PittAA] gi|145274198|gb|EDK14063.1| predicted permease [Haemophilus influenzae 22.4-21] Length = 358 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 56/362 (15%), Positives = 137/362 (37%), Gaps = 11/362 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + + YI + I + + + +V ++ +I+ +++ V T + + +G +P Sbjct: 2 INTLDRYIGKSILGTIFATLMTLVGLSAIIKFVEQFRSVGKGTYDIWQAVIFTGLTMPKD 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ +EL+I+ + G SR + V+ A+ L +F I Sbjct: 62 IETFFPMAALLGALIALGNLASRSELVIMQSAGFSRFKIGIAVMKTALPLVVFTMIIGEW 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SR 179 P+ + + AKA + ++ ++ + D ++ + + + L I+I + Sbjct: 122 GIPQTEQFARDMRAKALSGGSILSIKNGVWAK-DGHHFVFVRRVTDDTKLDDIYIYTFDQ 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS--T 237 K+ +A S D L +V+ + +I S T +T Sbjct: 181 QHNLIKLKHANQASYSEDEAKWTLR--QVNHSTITKDEIITTNHLSETWETSLTPDKLGA 238 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L+ ++S L + + + + + F +++ Q + + L+++ Sbjct: 239 VSLRPTSLSISGLYH-YISFLRETGQDVSRFELTFWRKIFQPVSVGVMMLLALSFIFG-- 295 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHK--IEQNPYYIPILYLFLFCISSIFLLMIK 355 +R I + + F + + + P L L I I+ L+ + Sbjct: 296 SLRSVTAGARIVTGICVGFLFYVVNEILGQTSVVYGIPAIFGALIPSLLFIVMIWWLLSR 355 Query: 356 KK 357 K+ Sbjct: 356 KR 357 >gi|262376977|ref|ZP_06070203.1| permease YjgP/YjgQ family protein [Acinetobacter lwoffii SH145] gi|262308015|gb|EEY89152.1| permease YjgP/YjgQ family protein [Acinetobacter lwoffii SH145] Length = 356 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 51/361 (14%), Positives = 121/361 (33%), Gaps = 24/361 (6%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + ++ + + L + + + + L + + LK + P L Sbjct: 5 RIVAKHVTQTTALAMLGATAVLAGLQVLFTYLGELGSL-KDGYGAWDALKYVLWGAPNYL 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ N+EL+++ + G S ++ V+ A+LL + F + Sbjct: 64 YEILPISALIGAVLGLGTLASNSELIVMRSVGVSLWRIVGWVIRSALLLVVLSFALSEWV 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SRD 180 P K + + + E ++ + +I I N L+ + ++D ++ Sbjct: 124 IPYTNEQAKSVKS---ASKAAQLGEVRGYWTREGQRFIYIDYANSQGQLKNVQMLDFDQN 180 Query: 181 TQTHKIYYAQSGSIDLDR--------QAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 + A G D Q IL +G + + L + Sbjct: 181 YRLRGTLQADQGQFVKDGSWTLDNTEQFDILQNGNATLVKQQQQPL--------ALALQP 232 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--I 290 + + D + S L++ Y ++ +TY+ F ++L + +I+ Sbjct: 233 KYVHMVTIDPEDLSPSQLVSFMSYMHEYS-QVPKTYQLAFWQKLGSPFALIALVVIACSF 291 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 + R + + +F L + + + +++ I L +F I Sbjct: 292 IFGPLRQQSMGFRLVIALFAGLGFFYLQDFLGYASLIYAPSPAWFVFIPILIMFGIGGYL 351 Query: 351 L 351 L Sbjct: 352 L 352 >gi|260779400|ref|ZP_05888291.1| putative membrane protein [Vibrio coralliilyticus ATCC BAA-450] gi|260604490|gb|EEX30790.1| putative membrane protein [Vibrio coralliilyticus ATCC BAA-450] Length = 356 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 55/358 (15%), Positives = 133/358 (37%), Gaps = 9/358 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +LYI R I + + V ++ +I+ ++++ V + L L IP + Sbjct: 3 KILDLYIGRTIIATTSLVLATFVGLSAIIKYVEQLRKVGQGSYDLLQALFYVLLSIPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++ + VL A+ L + + + Sbjct: 63 EMFFPMAALLGALIGLGMLASSSELVVMQAAGYSKLDIGLSVLKTAVPLMVLVTLLGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + L A + ++ R +D +I I K + + D Sbjct: 123 APQAQKMARDLRAFTTSGGAIMSVRTGVWARDAND-FIFIGKVEDDKLYGLSMWRYNDDK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-DISIMKFKSYTLQTESANSSTIVL 240 Q + +A D ++ D ++ + + + + +T + + + Sbjct: 182 QLESVVHAAEVDYLSDNT-WVMKDVQLTEMADEVEITKTSLPEYRWTTSLAPDKLAVVTV 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADKRAL 298 K + +LS L + + Y +++TQ + L++ + R++ Sbjct: 241 KPEELSLSGLYD-YVTYLKASEQDASRYELALWRKVTQPFSIAVMMLMALSFIFGPLRSV 299 Query: 299 VRQRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + + + F+G +++ I P + ++ +F ++ LL K Sbjct: 300 TMGARILSGVVAGFTFYISSEFFGPLSLVYSIP--PVFGAVMPSIVFLTVALALLRRK 355 >gi|68250306|ref|YP_249418.1| permease [Haemophilus influenzae 86-028NP] gi|145633638|ref|ZP_01789365.1| predicted permease [Haemophilus influenzae 3655] gi|148825754|ref|YP_001290507.1| leucyl aminopeptidase [Haemophilus influenzae PittEE] gi|229847324|ref|ZP_04467426.1| leucyl aminopeptidase [Haemophilus influenzae 7P49H1] gi|68058505|gb|AAX88758.1| predicted permease [Haemophilus influenzae 86-028NP] gi|144985515|gb|EDJ92331.1| predicted permease [Haemophilus influenzae 3655] gi|148715914|gb|ABQ98124.1| leucyl aminopeptidase [Haemophilus influenzae PittEE] gi|229809749|gb|EEP45473.1| leucyl aminopeptidase [Haemophilus influenzae 7P49H1] Length = 358 Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats. Identities = 57/362 (15%), Positives = 138/362 (38%), Gaps = 11/362 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + + YI + I + + + +V ++ +I+ +++ V T + + +G IP Sbjct: 2 INTLDRYIGKSILGTIFATLMTLVGLSAIIKFVEQFRSVGKGTYDIWQAVIFTGLTIPKD 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ +EL+I+ + G SR + V+ A+ L +F I Sbjct: 62 IETFFPMAALLGALIALGNLASRSELVIMQSAGFSRFKIGIAVMKTALPLVVFTMIIGEW 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SR 179 P+ + + AKA + ++ ++ + D ++ + + + L I+I + Sbjct: 122 GIPQTEQFARDMRAKALSGGSILSIKNGVWAK-DGHHFVFVRRVTDDTKLDDIYIYTFDQ 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS--T 237 K+ +A S D L +V+ + + +I S T +T Sbjct: 181 QHNLIKLKHANQASYSEDEAKWTLR--QVNHSTIMKDEIITTNHLSETWETSLTPDKLGA 238 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L+ ++S L + + + + + F +++ Q + + L+++ Sbjct: 239 VSLRPTSLSISGLYH-YISFLRETGQDVSRFELTFWRKIFQPVSVGVMMLLALSFIFG-- 295 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHK--IEQNPYYIPILYLFLFCISSIFLLMIK 355 +R I + + F + + + P L L I I+ L+ + Sbjct: 296 SLRSVTAGARIVTGICVGFLFYVVNEILGQTSVVYGIPAIFGALIPSLLFIVMIWWLLSR 355 Query: 356 KK 357 K+ Sbjct: 356 KR 357 >gi|126661397|ref|ZP_01732459.1| hypothetical protein CY0110_10922 [Cyanothece sp. CCY0110] gi|126617328|gb|EAZ88135.1| hypothetical protein CY0110_10922 [Cyanothece sp. CCY0110] Length = 353 Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats. Identities = 41/359 (11%), Positives = 123/359 (34%), Gaps = 33/359 (9%) Query: 21 LFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSM 80 L V + + + V S L +I +P P + T + Sbjct: 1 LVSVLGVAIGYLSDLADKVVDSNLPLMQASEILLLKVPEFTAYALPISVMLSTLLTYGRL 60 Query: 81 NRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLAL 140 + ++EL+ + G S LI P + +++ ++ F+ ++ P + + Sbjct: 61 SNDSELIAFRSCGVSLYRLIIPAMVMSLAVTGVTFLMSELVVPAANYRATAILVEYLQED 120 Query: 141 TFSYLEENLFFRLDDDLY------------IKISKYNPNNTLQGIFIVDSRDTQTHKIYY 188 + +++F+ + + + ++ L+ + +++ + + ++I Sbjct: 121 HPYWQNKDIFYPDYEQVTLPNGDQEKRLKHLFFAEQFDGQHLKTLTVLEWLEERLNRIVV 180 Query: 189 AQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKS---------YTLQTESANSSTIV 239 + S + + + +G +++ S + F+ + + + + Sbjct: 181 SDSATWNGQEETWDFFNGTIYQLSSDASYKEAYPFEHRQLPLTKAAFEFALQGRDPYEMN 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + Q + L + + L ++ ++L V+F +V + A Sbjct: 241 IIQARQYMKILKMMGDD------KKLRMFQVRIQQKLAFPFICVVF---GVVGSALGATP 291 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMIKK 356 +Q + +S+ I F + ++I + P+L +L ++ ++ + Sbjct: 292 QQMSRATGFGLSVVIIFSYYLLG-FLIGSLGLMGLISPVLAGWLPNLLGLAMGGWLLYR 349 >gi|240948567|ref|ZP_04752940.1| permease, inner membrane protein yjgQ [Actinobacillus minor NM305] gi|240297075|gb|EER47646.1| permease, inner membrane protein yjgQ [Actinobacillus minor NM305] Length = 360 Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats. Identities = 56/360 (15%), Positives = 124/360 (34%), Gaps = 9/360 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E YI + I + ++ +V + +I+ ++ V + + + IP Sbjct: 6 MNVLERYIGKTILSAIFLTLFLLVGLGAIIKFVEEFKAVGKGSYDALLAAYYTFLTIPRD 65 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + L ++ +EL+++ +G SR + V+ A+ L +F I Sbjct: 66 VETFFPIAALLGSLLGLGNLASRSELVVMQASGFSRFRIGLAVMKTAVPLILFTMIIGEW 125 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + + + + F+ D + ++ I + L + I Sbjct: 126 GVPQTEQYARDMRS-VAQSGGSMLSTSGGFWARDGENFVYIRRIGSETQLNNLSIYHFDK 184 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + I A D + IL E S S K + + + + L Sbjct: 185 KELKSITQAAEAKYTND--SWILKKVEKSTIEGNSIKQSKEKDQPWQTSITPSKLGIVSL 242 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K +++ L + + + + F +++ Q + + L++I +R Sbjct: 243 KPESLSITGLAD-YVGFLKETGQDPKRFEITFWRKVYQPISMAVMMLLAISFIFGP--LR 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY---IPILYLFLFCISSIFLLMIKKK 357 I I + F + + + I L L C+S ++ L+ KK+ Sbjct: 300 SSTMGAKIVIGIVAGFMFYVANIVFGNMSLIATWLPVSIGALIPSLICLSIVWWLLTKKR 359 >gi|157960740|ref|YP_001500774.1| permease YjgP/YjgQ family protein [Shewanella pealeana ATCC 700345] gi|157845740|gb|ABV86239.1| permease YjgP/YjgQ family protein [Shewanella pealeana ATCC 700345] Length = 352 Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats. Identities = 56/349 (16%), Positives = 130/349 (37%), Gaps = 15/349 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK +LYI R + + ++ L + ++ +I+ + ++ +V + ++ +LIP Sbjct: 1 MKILDLYIARILISTSSLALLVLTGLSGIIKWVDQLRVVGRGSYTMMDAGVYVLFLIPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + + + N+EL+++ ++G SR+ + + AI L I + + Sbjct: 61 IELFFPMAVLLGALIGMGMLASNSELVVMQSSGLSRLQITMSAMKTAIPLMILVMMLTEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P K++ + ++ + L++ I +N L+ I + + D Sbjct: 121 VAPVAELRAKEIKRTKVSGGSLIESNRGIWAKDGP-LFVSIGGVVDSNHLRDITLYEFSD 179 Query: 181 -TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 T +A S + L D + ++ + S + Sbjct: 180 TTDLTSTVHADSAEYR--DKYWQLFDVRRTTLKDEQVVLVNLEQDKWISSLTPEKLSVVS 237 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 +K ++ LL+ + + E Y ++L Q + + L+++ Sbjct: 238 VKPEALSIEGLLD-YLDYLESNNQASERYELALWRKLMQPVTVAVMMLVALSFVFGP--- 293 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 + + + + GV GFS+ I P I +Y IS+ Sbjct: 294 -----LRTVTMGARVLLGVVAGFSFYICSEIFGPLSI--VYGLPAFISA 335 >gi|226951740|ref|ZP_03822204.1| permease YjgP/YjgQ-like protein [Acinetobacter sp. ATCC 27244] gi|294648982|ref|ZP_06726430.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] gi|226837530|gb|EEH69913.1| permease YjgP/YjgQ-like protein [Acinetobacter sp. ATCC 27244] gi|292825117|gb|EFF83872.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] Length = 356 Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats. Identities = 52/359 (14%), Positives = 131/359 (36%), Gaps = 11/359 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + ++ + + L + L + F+ + L + + + + L + P L Sbjct: 5 RIVAKHVTKTTVLAMLGTTLVLSFLQVLFTYLGELGSLKPNYNAWQAFL-YVLWGAPRYL 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + + L ++ N+EL+++ + G S ++ V+ A+LL + F + Sbjct: 64 YEILPVAALIGSVLGLGALASNSELIVMRSVGISLWRIVGWVMRSALLLIVLSFTLSEWV 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + K Q ++ + + R I N L+ I +D + Sbjct: 124 IPYTNEKAQSI--KKQRSVAALGEVKGYWSREGQRFT-YIDYANSQGQLRNIQSIDFDEN 180 Query: 182 -QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + A+ G+ D Q + ++ + + ++ L + + + Sbjct: 181 YRLQSFVTAEQGNFVKDGQWTLEQSHQIDLLPQGNAIKTDHANQALALALQPKYVHMVTI 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 D + + L++ Y ++ +TY F +++ + LI+ +R Sbjct: 241 DPEDLSPTQLISFMRYMEEYS-QVPKTYELAFWQKVASPFALIALVLIACSFIFGP--LR 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKI---EQNPYYIPILYLFLFCISSIFLLMIKK 356 Q+ + I+L G F+ ++ + +P + +L + L + +LL + Sbjct: 298 QQSMGFRLVIALFTGLGFFYLQDFMGYASLVYAPSPAWFVLLPVVLMFMIGSYLLYRAR 356 >gi|319776037|ref|YP_004138525.1| inner membrane protein [Haemophilus influenzae F3047] gi|329123195|ref|ZP_08251764.1| YjgP/YjgQ family membrane protein [Haemophilus aegyptius ATCC 11116] gi|317450628|emb|CBY86848.1| conserved inner membrane protein [Haemophilus influenzae F3047] gi|327471540|gb|EGF16984.1| YjgP/YjgQ family membrane protein [Haemophilus aegyptius ATCC 11116] Length = 358 Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats. Identities = 57/362 (15%), Positives = 137/362 (37%), Gaps = 11/362 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + + YI + I + + + +V ++ +I+ +++ V T + + +G IP Sbjct: 2 INTLDRYIGKSILGAIFSTLMTLVGLSAIIKFVEQFRSVGKGTYDIWQAVIFTGLTIPKD 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ +EL+I+ + G SR + V+ A+ L +F I Sbjct: 62 IETFFPMAALLGALIALGNLASRSELVIMQSAGFSRFKIGIAVMKTALPLVVFTMIIGEW 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SR 179 P+ + + AKA + ++ ++ + D ++ + + + L I+I + Sbjct: 122 GIPQTEQFARDMRAKALSGGSILSIKNGVWAK-DGHHFVFVRRVTDDTKLDDIYIYTFEQ 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS--T 237 K+ +A S D L +V+ + +I S T +T Sbjct: 181 QHNLIKLKHANQASYSEDEAKWTLR--QVNHSTITKDEIITTNHLSETWETSLTPDKLGA 238 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L+ ++S L + + + + + F +++ Q + + L+++ Sbjct: 239 VSLRPTSLSISGLYH-YISFLRETGQDVSRFELTFWRKIFQPVSVGVMMLLALSFIFG-- 295 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHK--IEQNPYYIPILYLFLFCISSIFLLMIK 355 +R I + + F + + + P L L I I+ L+ + Sbjct: 296 SLRSVTAGARIVTGICVGFLFYVVNEILGQTSVVYGIPAIFGALIPSLLFIVMIWWLLSR 355 Query: 356 KK 357 K+ Sbjct: 356 KR 357 >gi|197105522|ref|YP_002130899.1| hypothetical protein PHZ_c2059 [Phenylobacterium zucineum HLK1] gi|196478942|gb|ACG78470.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1] Length = 386 Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 105/268 (39%), Gaps = 8/268 (2%) Query: 15 SFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETT 74 + + + + +IL+ ++L+S S+E + +++ L+P + + P F + Sbjct: 5 PMVGATAVTLVALLLERILRLLDLLSESSERFTFVAQLAVNLVPHYVGLTLPAAFFIALI 64 Query: 75 NVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSA 134 V+ MN+ +E+ + G S L P L LA +LS I ++P R + + Sbjct: 65 IVVNRMNQASEIDALLAAGVSLTRLAAPYLVLAGVLSFLTLIVFGALQPYSRYAYRAVLH 124 Query: 135 KAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSRDTQTHKIYYAQSGS 193 AQ A + E +DDL + + + L +FI ++ A Sbjct: 125 AAQNAGWSGQVPEGTIIAPNDDLIMTTDQADAAGQRLTRVFIRRLTPEGREEVTTAGVAE 184 Query: 194 IDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST--IVLKANDQNL 247 + ++L DG+ R + + ++ F+ +T+Q + + +++ L Sbjct: 185 LRRTADGKNVTLMLKDGQQLRFNRR-GEPELLSFEDFTMQLPLSGPARLLRARGGDEREL 243 Query: 248 SFLLNPNPNNPNYRPELLETYRSEFHKR 275 + N ET +E + R Sbjct: 244 NLFELAKKANDPQSVIPRETLLAELYGR 271 >gi|119773934|ref|YP_926674.1| hypothetical protein Sama_0797 [Shewanella amazonensis SB2B] gi|119766434|gb|ABL99004.1| conserved hypothetical protein [Shewanella amazonensis SB2B] Length = 352 Score = 106 bits (264), Expect = 8e-21, Method: Composition-based stats. Identities = 53/354 (14%), Positives = 128/354 (36%), Gaps = 13/354 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI R + + + L + ++ +I+ + ++ LV + ++ +LIP Sbjct: 1 MSILDWYIARVLISTSSLCLLVLTGLSGIIKWVDQLRLVGRGSYTMMDAGVYVLFLIPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + L M N+EL+++ +G SR+ + + A+ L + + Sbjct: 61 IEMFFPMAVLLGALIGLGMMAANSELVVMQASGQSRLQITVSAMKTAVPLMLLVMALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SR 179 + P +L A + ++ + D DL++ I + + NTL I + + + Sbjct: 121 VAPAAEQRANELKATMISGGSLIKSHRGIWAK-DGDLFVNIGEVSDINTLGNITLYEFDQ 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + + A+ + D +A + + + + + + S + Sbjct: 180 QERLNHVVNARRATF--DGKAWQMQGVSKTHITEEAIVREDIDSELWQSSLTPDKLSVVS 237 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 +K ++ L+ + + Y ++L Q + + L+++ Sbjct: 238 VKPESLSIQGLMG-YLDYLRINSQDPSRYELALWRKLMQPVTVAVMMLVALSFVFGP--- 293 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + + + + GV GFS+ I P + + LL Sbjct: 294 -----LRSVTMGARVLLGVVAGFSFYICNEIFGPMTMVYQLPAFIGAGAPALLF 342 >gi|260771006|ref|ZP_05879935.1| putative membrane protein [Vibrio furnissii CIP 102972] gi|260614243|gb|EEX39433.1| putative membrane protein [Vibrio furnissii CIP 102972] gi|315179054|gb|ADT85968.1| hypothetical permease, YjgP/YjgQ family [Vibrio furnissii NCTC 11218] Length = 356 Score = 106 bits (264), Expect = 8e-21, Method: Composition-based stats. Identities = 58/358 (16%), Positives = 131/358 (36%), Gaps = 8/358 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I + ++ V ++ +I+ ++++ V T L L IP + Sbjct: 3 KILDWYIGRTIIATTMLVLATFVGLSGIIKYVEQLRKVGDGTYDLMQALLFVVLSIPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L ++ ++EL+++ G S++ + VL A+ L I + + Sbjct: 63 EMFFPMAALLGALIGLGALAASSELVVMQAAGFSKLDIGLSVLKTAVPLMIIITLLGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + L A A + ++ R +D +I I K + N Sbjct: 123 APQAQKAARDLRAFATSGGKILSVRTGVWARDIND-FIFIGKIDDNRLYGMNMWRFDEHK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-DISIMKFKSYTLQTESANSSTIVL 240 Q + +A+ L + ++ D EV + + + + + + Sbjct: 182 QLRHVIFAKQVDY-LGGNSWVMKDVEVTDMNDDVVITKQSLPEYRWETSLAPDKLAVVTV 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADKRAL 298 K + LS L + + + Y F +++TQ + L++ + R++ Sbjct: 241 KPEELALSGLYD-YVHYLKASEQDASRYELAFWRKITQPFSIAVMMLMALSFIFGPLRSV 299 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + + + F + F + + P + + +S LL+ +K Sbjct: 300 TMGARILSGVIAGFT--FYISSEFFGPLSLVYGIPPVFGAVAPSIVFLSIALLLLRRK 355 >gi|120436531|ref|YP_862217.1| permease [Gramella forsetii KT0803] gi|117578681|emb|CAL67150.1| permease [Gramella forsetii KT0803] Length = 459 Score = 106 bits (264), Expect = 8e-21, Method: Composition-based stats. Identities = 40/272 (14%), Positives = 95/272 (34%), Gaps = 25/272 (9%) Query: 24 VFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRN 83 +FI + I I ++ ++LK Y P ++P+V P + + S N Sbjct: 1 MFIFVLQTIWLYIGELAGKDLDAEVILKFLLYFSPKLVPLVLPLTILLTSIMTFGSFAEN 60 Query: 84 TELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFS 143 E + ++G S ++ + + +S F N + P L Sbjct: 61 YEFAAMKSSGISLGRAMRSLTVFIVFISFVAFFFANNVIPAAEFKSINLRKNIAQLKPAM 120 Query: 144 YLEENLFFRLDDDLYIKISKYNPNNT----LQGIFIVDSRDTQTHKIYY-AQSGSID--- 195 + E +F + I + L + I + T + A+ G + Sbjct: 121 AISEGIFNDIG---TFNIKVEDKTGENDQYLTDVIIHQKKQTGGNTTVIKAKEGELVGST 177 Query: 196 -LDRQAIILNDGEVHRK-------SPISKDISIMKFKSYTLQTESANSSTIVLKANDQ-N 246 D ++IL +G + + +K + F Y + + ++ + + L+ + Sbjct: 178 ESDVLSLILKEGNYYDEIKPSDYDKRKNKPFTKSYFDEYVINIDLSDFNNVNLEDESYSS 237 Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQ 278 +L + + E ++++ ++ R+ + Sbjct: 238 THGMLKISELD-----ESIDSFSVSYNNRMAE 264 >gi|262170558|ref|ZP_06038236.1| putative membrane protein [Vibrio mimicus MB-451] gi|261891634|gb|EEY37620.1| putative membrane protein [Vibrio mimicus MB-451] Length = 356 Score = 105 bits (263), Expect = 9e-21, Method: Composition-based stats. Identities = 53/358 (14%), Positives = 134/358 (37%), Gaps = 8/358 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I + + + V ++ +I+ ++++ V + L L IP + Sbjct: 3 KILDWYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGEGSYDLLQALLFVVLSIPRDV 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L ++ ++EL+++ G S++ + VL AI L I + + Sbjct: 63 EMFFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIVVTLLGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + + A A + ++ R +D +I I K + + Sbjct: 123 APQAQKLARDMRAFATSGGAIMSVRTGVWARDAND-FIFIGKVDNEQLIGMNLWRFDEHK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHR-KSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + +A+ + + ++ D ++ R + I + + + + + Sbjct: 182 KLSTVIFAEQVDYVGNNE-WLMKDAQLTRMVNEIEISKETLPEYRWRTSLAPDKLAVVTV 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADKRAL 298 K + +LS L + + + Y F +++TQ + + L++ + R++ Sbjct: 241 KPEELSLSGLSD-YVHYLKASEQDSSRYELAFWRKMTQPISIAVMMLMALSFIFGPLRSV 299 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + + + F + F + + P + L ++ L+ +K Sbjct: 300 TMGARILSGVIAGFT--FYISSEFFGPLSLVYGLPPLFGAVAPSLVFLTIALGLLGRK 355 >gi|71737643|ref|YP_273426.1| hypothetical protein PSPPH_1159 [Pseudomonas syringae pv. phaseolicola 1448A] gi|71558196|gb|AAZ37407.1| membrane protein, putative [Pseudomonas syringae pv. phaseolicola 1448A] gi|320322887|gb|EFW78978.1| hypothetical protein PsgB076_20532 [Pseudomonas syringae pv. glycinea str. B076] gi|320329804|gb|EFW85792.1| hypothetical protein PsgRace4_11126 [Pseudomonas syringae pv. glycinea str. race 4] Length = 353 Score = 105 bits (263), Expect = 1e-20, Method: Composition-based stats. Identities = 53/362 (14%), Positives = 121/362 (33%), Gaps = 16/362 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLV--SSSTESLNILLKISGYLIP 58 M + YI + + + L I+ + + I+ + S T +L L P Sbjct: 1 MVKLDRYIGKSVLLAILAVLGIILGLV---SLFAFIDEMGDISDTYTLADALSYVMLTAP 57 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + P + L ++ ++EL I+ G S ++ V+ +LL + + Sbjct: 58 RRVYDTLPMAALIGCLIGLGTLASSSELTIMRAAGVSIGRIVWAVMKPMLLLMVAGVLVG 117 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF---I 175 + P + + + AQ + L+ R ++ +I I+ PN + G+ Sbjct: 118 EYVAPYAENQAQAARSLAQGSGDAQSARHGLWHRQGEE-FIHINTVQPNGLMLGVTRYRF 176 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 D R T +A+ + D L D + ++ + + + Sbjct: 177 DDQRHMLTSS--FAKEANFKTD--YWELKDVSTTHFNDGRTEVINTPVERWDVALSPQLL 232 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 ST+++ ++S L N + + Y F ++ Q V L++I Sbjct: 233 STVIMPPESLSISGLWN-YAHYLADQGLSNGRYWLAFWTKVLQPAVTVALVLMAISFIFG 291 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 +R +F + + F + + + L ++ + + Sbjct: 292 P--LRSVTLGQRVFTGVVVGFTFRIIQDLLGPSSLLFGFPPLLAVLMPAAACALAGVYLL 349 Query: 356 KK 357 ++ Sbjct: 350 RR 351 >gi|32491207|ref|NP_871461.1| hypothetical protein WGLp458 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166414|dbj|BAC24604.1| yjgP [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 357 Score = 105 bits (263), Expect = 1e-20, Method: Composition-based stats. Identities = 65/361 (18%), Positives = 133/361 (36%), Gaps = 30/361 (8%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ I +S + I + ++++ ++ +S I+ + IP ++ Sbjct: 2 IILKYLIKKILKSQFHILCILFLIFFCQKLVRILSSMSEELIPKKIIFFLLILYIPEIIK 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + V+ ++ + E++ I G IK +LFL +L+ F F++ I Sbjct: 62 LILPLSLFISIALVMQKLHNSNEIISIKTCGIGNECFIKVILFLNLLVMSFSFVNVMWIS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD---SR 179 P + ++ + + L E F + D I + L+ IFIV Sbjct: 122 PLALNYKHKIISYNLSNIDKLKLNEKQFKFIKDKNIILFVDNIKDKNLKNIFIVKFILKN 181 Query: 180 DTQTHKIYYAQSGSIDLD----RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 ++ ++ GS+ D + I LN GE + S I F+ Y ++ + Sbjct: 182 KEYIPVVFVSKHGSLYKDLLKNKNVINLNYGEYYEIDFKSNYFFIASFERYQIELFN--- 238 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPEL---LETYRSEFHKRLTQWLFPVIFGLISIVA 292 S L P+ ++ +E Y+ E++ R+T +I +IS Sbjct: 239 ----------TFSRLKEPSSEYVYFKNLFNSCIEEYKLEYNWRITIVFSVLIMSIISFAL 288 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 K+ Q F +L + + F I N + +F I + + Sbjct: 289 NIKKLGSGQ-------FFNLFLGIFFYLIFFISQTFIYSNHSLFKLHSIFFMWIINFIYI 341 Query: 353 M 353 Sbjct: 342 F 342 >gi|258622809|ref|ZP_05717827.1| Predicted permease [Vibrio mimicus VM573] gi|258584997|gb|EEW09728.1| Predicted permease [Vibrio mimicus VM573] Length = 356 Score = 105 bits (263), Expect = 1e-20, Method: Composition-based stats. Identities = 53/358 (14%), Positives = 134/358 (37%), Gaps = 8/358 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I + + + V ++ +I+ ++++ V + L L IP + Sbjct: 3 KILDWYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGEGSYDLLQALLFVVLSIPRDV 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L ++ ++EL+++ G S++ + VL AI L I + + Sbjct: 63 EMFFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIVVTLLGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + + A A + ++ R +D +I I K + + Sbjct: 123 APQAQKLARDMRAFATSGGAIMSVRTGVWARDAND-FIFIGKVDNEQLIGMNLWRFDEHK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHR-KSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + +A+ + + ++ D ++ R + I + + + + + Sbjct: 182 KLSTVIFAEQVDYVGNNE-WLMKDAQLTRMVNEIEISKDTLPEYRWRTSLAPDKLAVVTV 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADKRAL 298 K + +LS L + + + Y F +++TQ + + L++ + R++ Sbjct: 241 KPEELSLSGLSD-YVHYLKASEQDSSRYELAFWRKMTQPISIAVMMLMALSFIFGPLRSV 299 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + + + F + F + + P + L ++ L+ +K Sbjct: 300 TMGARILSGVIAGFT--FYISSEFFGPLSLVYGLPPLFGAVAPSLVFLAIALGLLGRK 355 >gi|145629200|ref|ZP_01784999.1| hypothetical protein CGSHi22121_10370 [Haemophilus influenzae 22.1-21] gi|145639140|ref|ZP_01794747.1| hypothetical protein CGSHiII_03859 [Haemophilus influenzae PittII] gi|144978703|gb|EDJ88426.1| hypothetical protein CGSHi22121_10370 [Haemophilus influenzae 22.1-21] gi|145271702|gb|EDK11612.1| hypothetical protein CGSHiII_03859 [Haemophilus influenzae PittII] gi|309750721|gb|ADO80705.1| Lipopolysaccharide export permease, LptG [Haemophilus influenzae R2866] Length = 358 Score = 105 bits (263), Expect = 1e-20, Method: Composition-based stats. Identities = 57/362 (15%), Positives = 136/362 (37%), Gaps = 11/362 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + + YI + I + + + +V ++ +I+ +++ V T + + +G IP Sbjct: 2 INTLDRYIGKSILGAIFATLMTLVGLSAIIKFVEQFRSVGKGTYDIWQAVIFTGLTIPKD 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ +EL+I+ + G SR + V+ A+ L +F I Sbjct: 62 IETFFPMAALLGALIALGNLASRSELVIMQSAGFSRFKIGIAVMKTALPLVVFTMIIGEW 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SR 179 P+ + AKA + ++ ++ + D ++ + + + L I+I + Sbjct: 122 GIPQTEQFARDTRAKALSGGSILSIKNGVWAK-DGHHFVFVRRVTDDTKLDDIYIYTFDQ 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS--T 237 K+ +A S D L +V+ + +I S T +T Sbjct: 181 QHNLIKLKHANQASYSEDEAKWTLR--QVNHSTITKDEIITTNHLSETWETSLTPDKLGA 238 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L+ ++S L + + + + + F +++ Q + + L+++ Sbjct: 239 VSLRPTSLSISGLYH-YISFLRETGQDVSRFELTFWRKIFQPVSVGVMMLLALSFIFG-- 295 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHK--IEQNPYYIPILYLFLFCISSIFLLMIK 355 +R I + + F + + + P L L I I+ L+ + Sbjct: 296 SLRSVTAGARIVTGICVGFLFYVVNEILGQTSVVYGIPAIFGALIPSLLFIVMIWWLLSR 355 Query: 356 KK 357 K+ Sbjct: 356 KR 357 >gi|327398670|ref|YP_004339539.1| permease YjgP/YjgQ family protein [Hippea maritima DSM 10411] gi|327181299|gb|AEA33480.1| permease YjgP/YjgQ family protein [Hippea maritima DSM 10411] Length = 348 Score = 105 bits (263), Expect = 1e-20, Method: Composition-based stats. Identities = 71/365 (19%), Positives = 149/365 (40%), Gaps = 33/365 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YI ++F +S F V + + ++ + + S+ ++ Y P + Sbjct: 1 MKKIHKYITIFFLKTFFISLAFFVLLFVLSDFFSNLSDIVGNGVSIKYIISYYVYYTPFI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + PF FA+ + L ++ E++++ ++G S + KPVLF +I++++ +F S+ + Sbjct: 61 IYFSLPFIFALSSLVSLGYLSSKNEIIVMRSSGLSIFKIAKPVLFFSIIVAVLMFASKEL 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTL-QGIFIV--D 177 I A F + L + +++IK++ N N + + D Sbjct: 121 IVNYGLEK-----ASFVKHYYFKNKQFKLGWTKVGNMFIKVNGLNVTNNMAYNVTAYRVD 175 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK-FKSYTLQT----ES 232 + I A+ + + II DG S + S + FK + ++T S Sbjct: 176 KDFNRVEAIITAKR--VKFKPKEIIFIDG----CSFNMPNFSQGRCFKDFKIKTNKSFYS 229 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 SS+ + + ++L F + + Y ++ R +I LIS V Sbjct: 230 LFSSSKFKEPSIKSLVFSYKHSLDKDYYLSLIIH--------RFVYPFSCIILTLISFVF 281 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ----NPYYIPILYLFLFCISS 348 K R+ + +F S S+ F V+ G +I + + +P ++++ + S Sbjct: 282 VLKT-NPRRGGFVKNVFSS-SLVFLVYIGSLELISSMGRYSMVDPNISIVIFILFWLSVS 339 Query: 349 IFLLM 353 ++ L+ Sbjct: 340 VYNLL 344 >gi|289678193|ref|ZP_06499083.1| permease YjgP/YjgQ [Pseudomonas syringae pv. syringae FF5] Length = 321 Score = 105 bits (263), Expect = 1e-20, Method: Composition-based stats. Identities = 49/324 (15%), Positives = 110/324 (33%), Gaps = 16/324 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLV--SSSTESLNILLKISGYLIP 58 M + YI + + + L I+ + + I+ + S T +L L P Sbjct: 1 MVKLDRYIGKSVLLAILAVLGIILGLV---SLFAFIDEMGDISDTYTLADALSYVMLTAP 57 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + P + L ++ ++EL I+ G S ++ V+ ++L I + Sbjct: 58 RRVYDTLPMAALIGCLIGLGTLASSSELTIMRAAGVSIGRIVWAVMKPMLVLMIAGVLVG 117 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF---I 175 + P + + + AQ + L+ D +I I+ PN + G+ Sbjct: 118 EYVAPYAENQAQAARSLAQGSGDAQSARHGLW-HRQGDEFIHINTVQPNGLMLGVTRYRF 176 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 D R T +A+ D L D + S ++ + + + Sbjct: 177 DDQRHMLTSS--FAKEAHFKTD--YWELKDVATTHFNDGSTEVVNTPVERWDVALSPQLL 232 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQW--LFPVIFGLISIVAA 293 ST+++ ++S L + + + Y F ++ Q ++ IS + Sbjct: 233 STVIMPPESLSISGLWS-YAHYLADQGLSNGRYWLAFWTKVLQPAVTVALVLMAISFIFG 291 Query: 294 DKRALVRQRKKIHPIFISLSISFG 317 R++ ++ + + + Sbjct: 292 PLRSVTLGQRVFTGVVVGFTFRII 315 >gi|325295269|ref|YP_004281783.1| permease YjgP/YjgQ family protein [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065717|gb|ADY73724.1| permease YjgP/YjgQ family protein [Desulfurobacterium thermolithotrophum DSM 11699] Length = 354 Score = 105 bits (263), Expect = 1e-20, Method: Composition-based stats. Identities = 60/353 (16%), Positives = 123/353 (34%), Gaps = 8/353 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + Y+ R F+++ L + + VI + +++ S + Y +P Sbjct: 3 KRLDRYVFIETLRYFVLTLLTFMVLFIVIDFVSKMDTFLKSG--IADGFLYVIYRLPLYT 60 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 V P + T L++ + + EL ++ G S P++FLA L SI F+ ++ Sbjct: 61 VRVIPIATLIATMVTLSNFSFSNELTVVKALGISVYRFSFPIIFLAFLASILSFLIGELV 120 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRD 180 PK S K + K + F ++++F+ D+ ++ + NP + + I I Sbjct: 121 VPKSISLSKSIYYKVKENKNFHVSGKSIWFKKDEKTFVFMEYVNPAKSEAKRISIFFLGK 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + I++ L + K++ K + I Sbjct: 181 EFSPTKRIDALYGINIKDDIWKLKN----CFERKLKELKTTKISEKEINLGIGKKDLIFT 236 Query: 241 KANDQNL-SFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + + + SFLL Y + + +L L P++ +I I Sbjct: 237 QIETETMSSFLLYKVIKQLKRAGYDTTGYLVDLYSKLAISLLPLVVAVIGIPLGVFNPRN 296 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 ++ + + + FS + P+Y +F + LL Sbjct: 297 KKGYTLVIAAALIVFMWITISFFSSLGKSGVLPPFYSAFAPEVMFLSIGLLLL 349 >gi|330836570|ref|YP_004411211.1| permease YjgP/YjgQ family protein [Spirochaeta coccoides DSM 17374] gi|329748473|gb|AEC01829.1| permease YjgP/YjgQ family protein [Spirochaeta coccoides DSM 17374] Length = 427 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 67/423 (15%), Positives = 144/423 (34%), Gaps = 73/423 (17%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 YI++ SF ++ F FI +V QIL I V S+ +L + IP L Sbjct: 8 TLLRKYIVKEFLASFAVAFTFFFFIFFVNQILLLIQRVMVKNVSVADMLTLVVLSIPQFL 67 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PF + V+ + + E++ + ++G + PVL + I+LS+ FI +++ Sbjct: 68 IYTFPFSSLSAASMVIGEFSAHNEIIAMRSSGIPYRRIFSPVLVIGIVLSLLTFIVADML 127 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P ++ + + + + + I + +N + I + D+++T Sbjct: 128 LPFSSVRYQKEYREIMQKIPTLDVA--SYSSVTVGDKIITAGRVEDNIIHDIILFDAKET 185 Query: 182 QTHKIYYAQSGSIDLDRQA-----IILND---GEVHRKSPISKDISIMKFKSYTLQTESA 233 + A+ G+I + L + EV P S +S + ++ Sbjct: 186 AEPRTISARQGTIFPGISQNLTYRLELENPVVLEVSSTDPSSWSLSSARTARLSVDFIDQ 245 Query: 234 NSSTIVLKANDQNLSFLLNP----------------------------------NPNNPN 259 + + L + L++ + +N Sbjct: 246 SGALATLTPAQMSSRDLISAIEVRKQKINEQKQENLRLQNSLADELASVKAKAEDTDNGT 305 Query: 260 YRPELLETYR-----------------------SEFHKRLTQWLFPVIFGLISIVAADKR 296 + L R +E HK+L F LI + A Sbjct: 306 EKERLKTNARQLEQKITSLKNYKIEDFYYTYYRAELHKKLALSAAC--FCLI-LTALPIS 362 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP--ILYLFLFCISSIFLLMI 354 + + ++ +SL I+ V+W + + + + P +++ + +I L + Sbjct: 363 FIKVRHGRLIGFGLSLLIA-CVYWFILFFMQLKIFDVSFSPGWLMWFPDVLVLAIGLAFL 421 Query: 355 KKK 357 ++ Sbjct: 422 SRQ 424 >gi|262373935|ref|ZP_06067212.1| permease YjgP/YjgQ family protein [Acinetobacter junii SH205] gi|262310946|gb|EEY92033.1| permease YjgP/YjgQ family protein [Acinetobacter junii SH205] Length = 356 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 54/359 (15%), Positives = 133/359 (37%), Gaps = 11/359 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + ++ + + L + L + F+ + L + + + + L + P L Sbjct: 5 RIVAKHVTKTTVLAMLGTTLVLSFLQVLFTYLGELGSLKPNYNAWQAFL-YVMWGAPRYL 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + + L ++ N+EL+++ + G S ++ V+ A+LL + F+ + Sbjct: 64 YEILPVAALIGSVLGLGALASNSELIVMRSVGISLWRIVGWVMRSALLLIVLSFVLSEWV 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI-FIVDSRD 180 P + + K Q ++ + + R I N L+ I I ++ Sbjct: 124 IPYTNEKAQSI--KKQRSVATLGEVKGYWSREGQRFT-YIDYANSQGQLRNIQSIDFDQN 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + A+ G D Q + + +V + + + ++ L + + L Sbjct: 181 YRLQSFITAEKGQFVKDGQWTLQDSHQVDLLAQGNAIKTDHAQQALGLALQPKYVHMVTL 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 D + S L++ Y ++ ++Y F ++++ + LI+ +R Sbjct: 241 DPEDLSPSQLVSFMRYLEEYS-QVPKSYELAFWQKVSSPFALIALVLIACSFIFGP--LR 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKI---EQNPYYIPILYLFLFCISSIFLLMIKK 356 Q+ + I+L G F+ ++ + +P + +L + L +LL + Sbjct: 298 QQSMGFRLVIALFTGLGFFYLQDFLGYASLVYAPSPAWFVLLPIMLMFGIGSYLLYRAR 356 >gi|329962824|ref|ZP_08300709.1| permease, YjgP/YjgQ family [Bacteroides fluxus YIT 12057] gi|328529381|gb|EGF56294.1| permease, YjgP/YjgQ family [Bacteroides fluxus YIT 12057] Length = 378 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 62/369 (16%), Positives = 139/369 (37%), Gaps = 19/369 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 +K + YI++ +++ + I+ IA V ++++ S I+ IP Sbjct: 20 LKRLDWYIIKKFLGTYVFAIALIISIAVVFDFNEKMDRFMSHEAPWNAIVFDYYLNFIPY 79 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + +TG S +++P + A +++I F + Sbjct: 80 FANLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMLRPYMVSAAIIAIVTFSLGS 139 Query: 120 IIEPKC---RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + P+ R + K + A T ++ +D ++ I ++ + F + Sbjct: 140 YVIPRGSVTRINFEDKYYKPRKANTARNIQ----LEVDSNVIAYIERFEDYSKTGYRFSL 195 Query: 177 DS-RDTQTHKIYYAQSGSIDLDR-QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 D RD Q A+S + D + D + + + SI K Sbjct: 196 DKFRDKQLVSHLTARSITYDTASIHKWTIKDYMIREMDGMKE--SITKGDRIDTTLFMEP 253 Query: 235 SSTIVLKANDQNLS--FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + +++K + L+ L ++ + E+HKR+ I LI + Sbjct: 254 ADFLIMKNQQEMLTSPQLSEYIDRQRQRGFANIKEFEIEYHKRIAMSFASFILTLIGVSL 313 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF-LFCISSIFL 351 + K+ + + I L++SF + F I N P++ ++ + + Sbjct: 314 SSKKT---KGGMGLHLGIGLALSFS-YILFQTIASTFAVNGNVPPVIAVWIPNVLYTFIA 369 Query: 352 LMIKKKYTK 360 + KK K Sbjct: 370 FYLYKKAPK 378 >gi|262166530|ref|ZP_06034267.1| putative membrane protein [Vibrio mimicus VM223] gi|262026246|gb|EEY44914.1| putative membrane protein [Vibrio mimicus VM223] Length = 356 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 52/358 (14%), Positives = 134/358 (37%), Gaps = 8/358 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I + + + V ++ +I+ ++++ V + L L IP + Sbjct: 3 KILDWYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGEGSYDLLQALLFVVLSIPRDV 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L ++ ++EL+++ G S++ + VL AI L + + + Sbjct: 63 EMFFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMVVVTLLGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + + A A + ++ R +D +I I K + + Sbjct: 123 APQAQKLARDMRAFATSGGAIMSVRTGVWARDAND-FIFIGKVDNEQLIGMNLWRFDEHK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHR-KSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + +A+ + + ++ D ++ R + I + + + + + Sbjct: 182 KLSTVIFAEQVDYVGNNE-WLMKDAQLTRMVNEIEISKDTLPEYRWRTSLAPDKLAVVTV 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADKRAL 298 K + +LS L + + + Y F +++TQ + + L++ + R++ Sbjct: 241 KPEELSLSGLSD-YVHYLKASEQDSSRYELAFWRKMTQPISIAVMMLMALSFIFGPLRSV 299 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + + + F + F + + P + L ++ L+ +K Sbjct: 300 TMGARILSGVIAGFT--FYISSEFFGPLSLVYGLPPLFGAVAPSLVFLTIALGLLGRK 355 >gi|94495767|ref|ZP_01302347.1| permease YjgP/YjgQ [Sphingomonas sp. SKA58] gi|94425155|gb|EAT10176.1| permease YjgP/YjgQ [Sphingomonas sp. SKA58] Length = 366 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 55/358 (15%), Positives = 124/358 (34%), Gaps = 8/358 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRI-NLVSSSTESLNILLKISGYLIPTV 60 + LY+ R +V + + +L ++++ S L G P + Sbjct: 9 RQISLYMARLFLTRTFAVLAMLVVVLQTLDLLGNSGDILAYPGNSDAQLWHYVGLRAPQI 68 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + PF + T +L ++N+N+E++ + G S ++ P++ A+ +SI F+ Sbjct: 69 IATFLPFSVLLGTLVMLATLNQNSEIISMKAAGLSAHQILAPLVLAALGVSIISFVFNER 128 Query: 121 IEPKCRSTIKQLSA-KAQLALTFSYLEENLFFRLDDDLY--IKISKYNPNNTLQGIFIVD 177 I + + + A S ++ N + R ++L ++ L+ + I + Sbjct: 129 IVVRSTAALSAWEAVDYGPVPPDSGVKSNPWVRDGNNLVNAAIVAGRGTAVQLRQVEIYN 188 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + I A G D+ ++ +L G +S + + + Sbjct: 189 RINNRLTTIVQAPKGHYDVASKSWVLE-GARQ-FDVARGTVSNIGTVRFGRDIRPDQFTL 246 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + L + + +L+ L ++ ++ VAA A Sbjct: 247 ARVDPDALTFHEL-EAAIGDLRDAGRPTKELEGSLWHKLSGPLSALLMPILGSVAAFGLA 305 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYI-IHKIEQNPYYIPILYLFLFCISSIFLLMI 354 Q + ++L ++ V FS + P FLF + +L Sbjct: 306 RSGQLFMRAVLGMALGFAYFVADNFSLAMGNLGAYPPVLAAWAPFFLFLLVGETVLFR 363 >gi|332296606|ref|YP_004438529.1| permease YjgP/YjgQ family protein [Thermodesulfobium narugense DSM 14796] gi|332179709|gb|AEE15398.1| permease YjgP/YjgQ family protein [Thermodesulfobium narugense DSM 14796] Length = 365 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 52/354 (14%), Positives = 114/354 (32%), Gaps = 23/354 (6%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K F YIL+ F L + + ++ I LV+ + S K++ +P + Sbjct: 7 KLFWSYILKDFLPFFFFGLLAFSGLMLAGESMRTIKLVADNQGSFLTGAKLAACGLPYSI 66 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + ++ ++ N EL+ + + G S P + + I+ S F + + Sbjct: 67 AFAFPMATLLGVLMAVSRISSNWELVALRSAGLSIFKFSLPFIIIGIIFSTVSFFTFEKL 126 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFF----RLDDDLYIKISKYNPNN-TLQGIFIV 176 + + AK + + LF I Y P +LQ ++I Sbjct: 127 AYPLLDKSRYIIAKDLKKELNTERQNVLFKLPPDSPQPKFIIFAKDYKPATMSLQDVYIQ 186 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + Y+ + + + G + S + + F+ + + Sbjct: 187 EFDNEFLKRTIYSSE--LSFTGNRWVASKGLSYEFSKDGIIVGRLDFEKLIVPLGVLPQT 244 Query: 237 T---IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 K D + LL+ N+ + + + + + +L+ F I + Sbjct: 245 VKALPTKKPRDMSFFELLSYLSNSKDIVDK---SLYVDLYNKLSLPFACFAFACIGVAFG 301 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCIS 347 ++ I+++ + FS + YL F S Sbjct: 302 IA---SERKSSAIGFGIAITTVLFYYLIFSLF-------TTLGYMSYLPPFIAS 345 >gi|293610040|ref|ZP_06692341.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292827272|gb|EFF85636.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|325124205|gb|ADY83728.1| hypothetical protein BDGL_003142 [Acinetobacter calcoaceticus PHEA-2] Length = 356 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 55/360 (15%), Positives = 131/360 (36%), Gaps = 13/360 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y+ + + + + + + + L + + + L + P L Sbjct: 5 RIVAKYVTKTTALAMFGTTVVLSILQVLFTYLGELGELKPD-YNAWQALVYVLWGAPRYL 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L S+ ++EL+++ + G S ++ V+ A+LL I F + Sbjct: 64 YEILPISALIGAVIGLGSLATSSELIVMRSVGVSLWRIVGWVMRSALLLIILSFALSEWV 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SRD 180 P + + K+ ++ + + R + +I I N L+ I +VD ++ Sbjct: 124 IPYTNEKAQSV--KSHRSVAALGEVKGYWSR-EGQRFIYIDYANSQGNLRDIQVVDFDQN 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISI-MKFKSYTLQTESANSSTIV 239 + AQ G + Q L E I + +S L + + Sbjct: 181 YYLQSLINAQQGQFIKNGQ-WALKKAEQMDILAAGNAIKTDHEEQSLALALQPKYVHMVT 239 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L D + S L++ Y ++ +TY+ F +++ + L++ + Sbjct: 240 LDPEDLSPSQLISFMRYMDEYS-QVPKTYQLAFWQKVASPFSLIALVLVACSFIFGP--L 296 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKI---EQNPYYIPILYLFLFCISSIFLLMIKK 356 RQ+ + I+L I ++ ++ + +P + ++ + L + +LL + Sbjct: 297 RQQSMGFRLVIALFIGLSFYYLQDFLGYASLVYSPSPAWFVLVPILLMFGAGSYLLYRAR 356 >gi|16273590|ref|NP_439845.1| hypothetical protein HI1703 [Haemophilus influenzae Rd KW20] gi|260581044|ref|ZP_05848866.1| conserved hypothetical protein [Haemophilus influenzae RdAW] gi|1176473|sp|P45332|LPTG_HAEIN RecName: Full=Lipopolysaccharide export system permease protein lptG gi|1574557|gb|AAC23349.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20] gi|260092284|gb|EEW76225.1| conserved hypothetical protein [Haemophilus influenzae RdAW] Length = 358 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 57/362 (15%), Positives = 137/362 (37%), Gaps = 11/362 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + + YI + I + + + +V ++ +I+ +++ V T + + +G IP Sbjct: 2 INTLDRYIGKSILGAIFATLMTLVGLSAIIKFVEQFRSVGKGTYDIWQAVIFTGLTIPKD 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ +EL+I+ + G SR + V+ A+ L +F I Sbjct: 62 IETFFPMAALLGALIALGNLASRSELVIMQSAGFSRFKIGIAVMKTALPLVVFTMIIGEW 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SR 179 P+ + AKA + ++ ++ + D ++ + + + L I+I + Sbjct: 122 GIPQTEQFARDTRAKALSGGSILSIKNGVWAK-DGHHFVFVRRVTDDTKLDDIYIYTFDQ 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS--T 237 K+ +A S D L +V+ + + +I S T +T Sbjct: 181 QHNLIKLKHANQASYSEDEAKWTLR--QVNHSTIMKDEIITTNHLSETWETSLTPDKLGA 238 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L+ ++S L + + + + + F +++ Q + + L+++ Sbjct: 239 VSLRPTSLSISGLYH-YISFLRETGQDVSRFELTFWRKIFQPVSVGVMMLLALSFIFG-- 295 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHK--IEQNPYYIPILYLFLFCISSIFLLMIK 355 +R I + + F + + + P L L I I+ L+ + Sbjct: 296 SLRSVTAGARIVTGICVGFLFYVVNEILGQTSVVYGIPAIFGALIPSLLFIVMIWWLLSR 355 Query: 356 KK 357 K+ Sbjct: 356 KR 357 >gi|332969353|gb|EGK08378.1| YjgP/YjgQ family permease [Kingella kingae ATCC 23330] Length = 354 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 52/370 (14%), Positives = 121/370 (32%), Gaps = 26/370 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YI+ + + I+ + I +L I + ++ + L+ +P Sbjct: 1 MKLLSRYIITRLSLMSAYALFAILSLYSFIDLLSEIG-IVGQNYTMAVALQYIALQMPAR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L + ++E +I +G S LI +L + ++F + Sbjct: 60 AYQLMPLATLIGGLIALNQLVSSSEWAVIKTSGWSSKRLIGTILQFGAIFAVFTILLGEW 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P+ + A+ T + + ++ + + I I P+ TL + I D Sbjct: 120 IAPELSRRGDAIKTLARSQQT-TLVHNGVWIK-QPNSMINIGAMLPDKTLLDVKIWQFND 177 Query: 181 T-QTHKIYYAQSGSIDLDRQAI------ILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 Q + YA+ + + L D ++ R S + +S L Sbjct: 178 QYQLTESVYAKQARFANGQWQLNQVQSSELADKQI-RTSQQGQRTWQFNIQSNMLDVLMV 236 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + Q + +L + Y ++P+ ++++VA Sbjct: 237 KPEQMSFINLTQYIGYLKDNKQQTEAYDVAWWNKL-----------VYPIATMVMALVAL 285 Query: 294 DKRALVRQRKKIHPIFIS---LSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 + + + L + F ++ + P ++ + L + Sbjct: 286 AFTSNSGRHGNLGLKLFGGICLGLLFFFTGRLFGFTTQLYRVPAFVSAV-LPTLGFALWA 344 Query: 351 LLMIKKKYTK 360 + +I K+ + Sbjct: 345 MWLIVKQERR 354 >gi|146297810|ref|YP_001192401.1| permease YjgP/YjgQ family protein [Flavobacterium johnsoniae UW101] gi|146152228|gb|ABQ03082.1| permease YjgP/YjgQ family protein [Flavobacterium johnsoniae UW101] Length = 362 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 59/365 (16%), Positives = 136/365 (37%), Gaps = 12/365 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + YIL+ +F + L + I VI + +++N + + + Sbjct: 2 LTIIDKYILKRYLATFSVMILLFIPIGIVIDVSEKVNKMLENKIPFTQIAIYYYNFTVYF 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + + NTE++ I ++G S ++P + A ++S+F+ + Sbjct: 62 ANSLFPIFLFLSVIWFTSKLANNTEIIAILSSGISFTRFLRPYIIGASIVSVFVLLMGFF 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLE---ENLFFRLDDDLYIKISKYNPNN-TLQGIFIV 176 I P + N+F +++D +I ++ +N + T + Sbjct: 122 IVPAASEGFNNFRYTYLKGNGKQLMRGENTNVFRQINDHDFIFVNSFNEESKTAFNFTLE 181 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + A D ++ L D ++ I K+ + E A+ + Sbjct: 182 HFEKEKLTYKITASRIKWDPKKKIYTLYDYTKRTVGDLNDVIEKAPEKNVGFKFELADLT 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 +V A L L++ + TY +K+ + + I +I++ Sbjct: 242 PVVYIAETLTLGKLIDFIEKERKRGSGNINTYLVVLYKKYSVPVSAFILTIIAVAV---S 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL----FCISSIFLL 352 ++ R+ + I ++I+F F F I + + + P+L ++ F I +++LL Sbjct: 299 SMKRRGGMGMNLAIGIAIAFS-FVFFDKIFGTLAEKSTFSPLLAVWFPNIVFGILAVYLL 357 Query: 353 MIKKK 357 K+ Sbjct: 358 RNAKR 362 >gi|114562104|ref|YP_749617.1| permease YjgP/YjgQ family protein [Shewanella frigidimarina NCIMB 400] gi|114333397|gb|ABI70779.1| permease YjgP/YjgQ family protein [Shewanella frigidimarina NCIMB 400] Length = 352 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 59/355 (16%), Positives = 134/355 (37%), Gaps = 15/355 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +LYI R I + + L + ++ +I+ + ++ LV ++ +L+P Sbjct: 1 MRILDLYIARMIVSTSSLCLLILTGLSGIIKWVDQLRLVGRGAYTMLDAGIYVLFLVPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + + N+EL+++ +G SR+ + + + AI L I + Sbjct: 61 IEMFFPMAVLLGALIGMGMLASNSELVVMQVSGMSRLQITQSAMKTAIPLMIMVMALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + K+L A + ++ + D DL++ I + NTL I + + D Sbjct: 121 GAPIAEKSAKELQATKISGGSLIKSHRGIWAK-DGDLFVNIGEVQDVNTLSNISLYEFND 179 Query: 181 TQTHKIYY-AQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 Q A + D + + + + + +D + + S + Sbjct: 180 QQELTRVTHANTAVFVDDVWQLSVVENTTVKDDRVIRD--HLDTDVWQSSLTPDKLSVVS 237 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 +K ++S L++ + + Y +++ Q + + L+++ Sbjct: 238 VKPEALSISGLID-YLDYLKVNQQDPSRYELALWRKVMQPVTVAVMMLVALSFVFGP--- 293 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + + + + GV GFS+ I P I +Y + +I M+ Sbjct: 294 -----LRTVTMGARVLLGVVAGFSFYISNEIFGPMSI--VYELPAVVGAIAPSML 341 >gi|33151746|ref|NP_873099.1| hypothetical protein HD0552 [Haemophilus ducreyi 35000HP] gi|33147967|gb|AAP95488.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP] Length = 360 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 53/366 (14%), Positives = 127/366 (34%), Gaps = 21/366 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E YI + I L + ++I++++ V + ++P+ Sbjct: 6 MNILERYIGKTIIMMMFAVLLMSSGLVFIIKLVEEFKNVGEGNYDALTATYYALLMLPSD 65 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+++ ++EL+++ +TG SR + V+ AI + I + Sbjct: 66 IKEFVPVVLLIGGLLGLSNLASHSELVVMQSTGFSRFRIGLAVMKTAIPIIILTMSASEW 125 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I PK + + + + F+ D + ++ I + L I I + Sbjct: 126 IIPKVEQFARNMRS-VAQSGGSMLSTNGGFWAKDGNNFLYIRHIENEHQLNNISIYHFEN 184 Query: 181 TQTHKIYYAQSGSIDLDRQAI------ILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + A S + + + D + +++ + Sbjct: 185 KVLTSVSQADSALFNGKDWTLQNLQTATITDHGIQTTHQANQNWQTT--------ITPSK 236 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + LK +++ L + + + + ++ F +++ Q + + L++I Sbjct: 237 LGIVSLKPESLSIAGLAD-YVSFLTETGQDSKRFQIAFWRKVYQPISMAVMMLLAISFIF 295 Query: 295 KRALVRQRKKIHPIFISLSISFGVFW---GFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 +R +FI + F + F + P I L L C++ ++ Sbjct: 296 GP--LRSSAMGTKLFIGIIAGFIFYVSNIVFGNMTLVFSWLPIAIGALIPSLICLAIVWW 353 Query: 352 LMIKKK 357 L+ KK+ Sbjct: 354 LLTKKR 359 >gi|121605071|ref|YP_982400.1| permease [Polaromonas naphthalenivorans CJ2] gi|120594040|gb|ABM37479.1| permease YjgP/YjgQ family protein [Polaromonas naphthalenivorans CJ2] Length = 379 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 57/385 (14%), Positives = 135/385 (35%), Gaps = 34/385 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVS---SSTESLNIL---LKISG 54 MK+ I + S + + + + + ++ + + + +S+ + L Sbjct: 1 MKTIRRLIYGEVLGSIALVAMGFLALFFFFDLVDELQYLGKNNGAGDSIYQIRHALLYVA 60 Query: 55 YLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFL 114 LIP L + P + + V++ + +++E I+ +G +K +L+L Sbjct: 61 LLIPNHLYELLPISVLIGSIFVMSRLAQSSEYTILRTSGLGPWRALKLLLWLGAFFVALS 120 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTF----SYLEENLFFRLDDDLYIKISKYNPNNTL 170 F+ + I P + + A+ Q +T ++L+E ++ + + +S+ +PNN + Sbjct: 121 FLVGDYIAPASERAAQLMKARYQNKITVGQTGAWLKEK---QVSSNFIVNVSELSPNNEM 177 Query: 171 QGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPIS-----------KDIS 219 G+ I + + A L + + + Sbjct: 178 HGVRIYEFNHQGLIVSTTEAPVAAFSLNTAWQLRNATRTEFDVTTSAGGVNAPAQQAKVK 237 Query: 220 IMKFKSYT--LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLT 277 SY + + S +L+ + L N + + + Y EF K++ Sbjct: 238 RTDVASYRWPTEISTEMVSVALLRPDRMATLDLFN-YIRHLEANGQTSQRYEIEFWKKVF 296 Query: 278 QWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPY 334 L ++ ++++ A R +F + I F F YI + P+ Sbjct: 297 YPLSCLVMVMLALPFA--YLHFRSGSITSYVFAGVMIGISFFLLNNVFGYIGNLRNWQPW 354 Query: 335 YIPILYLFLFCISSI--FLLMIKKK 357 L+ S+ F ++ ++ Sbjct: 355 LAAATPGLLYMAISMAAFGWLVLRR 379 >gi|328949933|ref|YP_004367268.1| permease YjgP/YjgQ family protein [Marinithermus hydrothermalis DSM 14884] gi|328450257|gb|AEB11158.1| permease YjgP/YjgQ family protein [Marinithermus hydrothermalis DSM 14884] Length = 346 Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats. Identities = 52/364 (14%), Positives = 132/364 (36%), Gaps = 25/364 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + E Y+LR +G L +V + + + + + + + + +P Sbjct: 1 MTTLERYLLREVGAYLLGGLTVVVLLLLGGVLFEVFAPLLARGADPLAVGQYLAHRVPEA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + L+ M ++EL ++ +G SR ++ +++ A LL++ F++ Sbjct: 61 LVRGLPIAYLFALLLALSRMAEDSELKVLLASGISRERVLLALVWFAALLALMGFVAGES 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ +Q+ +A LA + L+ FF + + + + I + R Sbjct: 121 WVPQQLQKARQVLRQAILAKPRALLQPGTFFTDAYGRLVYVGRVKDDG------IAEIRV 174 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ A SG+ R + L DG +I +F + + + Sbjct: 175 LAPGEVLTAASGAFVEGR--LFLEDGMRVTFEGARPR-TIARFAR-----GTMPLNELAF 226 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSE---FHKRLTQWLFPVIFGLISIVAADKRA 297 + + L Y +E + ++ + + F L ++ Sbjct: 227 EPPASVANLTLAELRARIQEFKRSGLPYHAEATAYWRKWAEPAATISFALFAV---GLAF 283 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF----LFCISSIFLLM 353 + + + ++++F + +S + + P++ + L+ +++ LL Sbjct: 284 WMLGGSRSLGMVGVVTLTFAYYATWSVF-RIMGEQGALPPVIAAWGPNLLYALAAGVLLG 342 Query: 354 IKKK 357 + ++ Sbjct: 343 VGRR 346 >gi|77457218|ref|YP_346723.1| permease YjgP/YjgQ [Pseudomonas fluorescens Pf0-1] gi|77381221|gb|ABA72734.1| putative ABC transport system, membrane protein [Pseudomonas fluorescens Pf0-1] Length = 353 Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats. Identities = 52/359 (14%), Positives = 125/359 (34%), Gaps = 13/359 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLV--SSSTESLNILLKISGYLIP 58 M + YI + F+ + I + + I+ + S T +L +L P Sbjct: 1 MVKLDRYIGSSV---FIAIIAVLAIILGLATLFAFIDEMGDVSDTYTLVDVLSFVLLTAP 57 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 L + P + L S+ ++EL ++ G S ++ V+ ++L + + Sbjct: 58 RRLYDMLPMAALIGCLIGLGSLASSSELTVMRAAGVSIGRIVWAVMKPMLVLMLAGVLIG 117 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF-IVD 177 + P S + + AQ + + ++ D +I I+ PN L G+ Sbjct: 118 EYVAPATESMAQANRSLAQGSGDAQSAKHGMW-HRQGDEFIHINSVQPNGRLYGVTRYHF 176 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 ++ +A+ D D L D + S ++ + + + ST Sbjct: 177 DKERHLLSSSFAKRAEFDTDH--WQLTDVTTTKFHERSTEVVNTPVERWDVSLSPQLLST 234 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWL--FPVIFGLISIVAADK 295 +V+ +++ L + + Y F ++ Q L ++ IS + Sbjct: 235 VVMAPESLSITGL-WGYIHYLADQGLSNGRYWLAFWVKVLQPLVTAALVLMAISFIFGPL 293 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R++ ++ + + + + +P + ++ + ++ ++LL Sbjct: 294 RSVTLGQRVFTGVLVGFTFRIVQDLLGPSSL-VFGFSPLFAVLVPAGVCALAGVWLLRR 351 >gi|297565137|ref|YP_003684109.1| permease YjgP/YjgQ family protein [Meiothermus silvanus DSM 9946] gi|296849586|gb|ADH62601.1| permease YjgP/YjgQ family protein [Meiothermus silvanus DSM 9946] Length = 337 Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats. Identities = 50/353 (14%), Positives = 115/353 (32%), Gaps = 28/353 (7%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + Y+LR + + L V + + ++ L+ +L++ Y +P L + Sbjct: 2 LQRYLLRETLGLYTVGILIFVGLLTTDLLSSLSGVLLRQNTPLSDVLQLVVYRLPYTLGI 61 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P L+ R +EL G +L+ P L L +++S +E ++P Sbjct: 62 ALPLGLVFSLLVTLSRWIRQSELKAAYAGGIPPRSLLWPALLLGVVVSGVALWNEGWVKP 121 Query: 124 KCRSTIKQLSAKAQL-ALTFSYLEENLFFRLDDDLYIKISKYNPNNT---LQGIFIVDSR 179 + ++ + + + L + ++ +Y + P+ L+G+ +++ Sbjct: 122 EAQARFDAVQYRIYYGSQLSGVLSDKVYAPEGLGVY-YAQRIYPDREGARLEGVRVIEP- 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 I+ A G + +R P ++ + + S+ Sbjct: 180 ---GGAIWSADRGRWLEKSWQLQ----NAYRVDPD-GKVTQVSLQPLPFPARFVPQSSSS 231 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 A L L +P+ R L TY L ++ ++IV Sbjct: 232 -GALTLRLPDLHAAARVDPSVRFTLARTY--------ANALGALVLAWLAIVVGLS---- 278 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 R+ + + FG + ++ + N + +L + Sbjct: 279 -LRESAWAFISIVGLIFGYYVLWTASAQFAKFNVWGAYGAWLPNLVYGLLAAW 330 >gi|52425603|ref|YP_088740.1| hypothetical protein MS1548 [Mannheimia succiniciproducens MBEL55E] gi|52307655|gb|AAU38155.1| unknown [Mannheimia succiniciproducens MBEL55E] Length = 356 Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats. Identities = 48/364 (13%), Positives = 135/364 (37%), Gaps = 18/364 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + + YI + I + + L +V ++ +I+ +++ V + + +P Sbjct: 2 MNTLDRYIGKSILGAIFATLLTLVGLSGIIKFVEQFRSVGKGSYDSMQAFLYTVLTMPKD 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ +EL+++ + G SR+ + V+ A+ L + + Sbjct: 62 IETFFPMAALLGALIALGNLASRSELVVMQSAGFSRMKIGFAVMKTALPLVLLTMVIGEW 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SR 179 P+ + + +KA + ++ ++ + +D +I I + + L I+I + Sbjct: 122 GIPQTEQFARDMRSKAISGGSMLSVKNGIWAKDGND-FIYIKRATEDANLNNIYIYSFND 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSY-----TLQTESAN 234 + Q ++ +A S + + + + +K K+Y Sbjct: 181 NRQLQRVSHANKASYENGSWVL-------KQVNESQISADEIKTKNYLNRPWKTSLTPDK 233 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVA 292 +K ++S L + + + + + + ++L Q + + +++ + Sbjct: 234 LGIFTVKPTSLSISGLSS-YISFLKETGQDSKKFELTYWRKLFQPISVGVMMMLALSFIF 292 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 R++ + + I + + F + P ++ LF + + +LL Sbjct: 293 GPLRSVTAGARIVTGICFGFVF-YVINEIFGPLSLVYNVAPIIGALMPSLLFLVITWWLL 351 Query: 353 MIKK 356 K+ Sbjct: 352 SRKR 355 >gi|328954009|ref|YP_004371343.1| permease YjgP/YjgQ family protein [Desulfobacca acetoxidans DSM 11109] gi|328454333|gb|AEB10162.1| permease YjgP/YjgQ family protein [Desulfobacca acetoxidans DSM 11109] Length = 372 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 60/344 (17%), Positives = 118/344 (34%), Gaps = 7/344 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + LY+ R R+F ++ V I +I ++I+ + + +L+ G +P Sbjct: 16 RLLMLYVAREFCRNFFLTLAAFVGIYLIIDFFEKIDRLHRAQLGFVGILEYFGAKLPLAT 75 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 V P + + R+ E I G + L++P+L LA +L +FL + Sbjct: 76 GQVLPASVLLAVIITFGILARHNETTAIKCAGLNITILLRPILLLASVLVLFLLSLNLFL 135 Query: 122 EPKCRSTIK-QLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 P + K ++ + D IS++ + +++ + I Sbjct: 136 TPWLTQRVNIIWETKVDKKPARELIDLKWLWYKGDRAIFHISEFRKDTKSMENVKIYVF- 194 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 D Q H + + Q +DG + P + +S + + TE + Sbjct: 195 DQQFHLTQFIAAQRAQWTGQNWRFSDGMIQTFLPQGEIVSEAFVERTMILTERPEDFVNL 254 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + + + L Y E H R+ L P+I LI Sbjct: 255 ERRVTELNGYDLYRYIRRLERDGYDSRPYWVELHSRIAFALTPIIVTLIG----GGLIFW 310 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 R++ I +S ++W S + Q + +L +L Sbjct: 311 REKGNISLGIVSGIALVFIYWLLSTFFLSLGQVRFMPVLLAAWL 354 >gi|330873093|gb|EGH07242.1| hypothetical protein PSYMP_02386 [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330963183|gb|EGH63443.1| hypothetical protein PSYAC_00745 [Pseudomonas syringae pv. actinidiae str. M302091] Length = 353 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 53/362 (14%), Positives = 117/362 (32%), Gaps = 16/362 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLV--SSSTESLNILLKISGYLIP 58 M + YI + + FL + I ++ + I+ + + T +L L P Sbjct: 1 MVKLDRYIGKSV---FLAILAVLGIILGLVSLFAFIDEMGDINDTYTLLDALSYVMMTAP 57 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + P + L ++ ++EL I+ G S ++ V+ +LL + + Sbjct: 58 RRVYDTLPMAALIGCLIGLGTLASSSELTIMRAAGVSIGRIVWAVMKPMLLLMVAGVLVG 117 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF---I 175 + P + + + AQ + L+ D +I I+ PN + G+ Sbjct: 118 EYVAPYAENQAQAARSLAQGSGDAQSARHGLW-HRQGDEFIHINTVQPNGLMLGVTRYRF 176 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 D R T +A+ D L D ++ + + + Sbjct: 177 DDQRHMLTSS--FAKEAHFKTD--YWELKDVSTTHFKEGRTEVVNAPDERWDVSLSPQLL 232 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 ST+++ ++S L + + + Y F ++ Q V L++I Sbjct: 233 STVIMPPESLSISGLWS-YAHYLADQGLSNGRYWLAFWTKVLQPAVTVALVLMAISFIFG 291 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 +R +F + + F + + + L + L + Sbjct: 292 P--LRSVTLGQRVFTGVVVGFTFRIIQDLLGPSSLLFGFPPLLAVLIPAAACAFAGLYLL 349 Query: 356 KK 357 ++ Sbjct: 350 RR 351 >gi|332708722|ref|ZP_08428694.1| putative permease [Lyngbya majuscula 3L] gi|332352576|gb|EGJ32144.1| putative permease [Lyngbya majuscula 3L] Length = 230 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 33/226 (14%), Positives = 82/226 (36%), Gaps = 16/226 (7%) Query: 5 ELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + FL I V + + ++ S I ++ P + Sbjct: 2 DRYIAAELIPPFLFGVGGFSSIGVAVGSLFDMVVKITELGLSWTIAAQVVLLKFPEFMSY 61 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + T + ++ ++EL+ + + G S L+ P L L+++++ F+ +I P Sbjct: 62 ALPISVLLATLIAYSRLSNDSELIALRSCGVSLYRLVAPALVLSLVVTGITFLFNELIVP 121 Query: 124 KCRSTIKQLSAKAQLALTFSYLEEN-------LFFRLDDDLY------IKISKYNPNNTL 170 KA ++ E F + + + ++ T+ Sbjct: 122 AANYQATITLEKALNQEKPAFDENGILYPEYQTFPQPNGTTTQTIKRLFYANGFD-GQTM 180 Query: 171 QGIFIVDSRD-TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPIS 215 + + +++ + + +KI ++S + + G ++ SP + Sbjct: 181 KDLTVLEWSNLGKLNKIILSESALWNSKQNTWDFFHGSIYFISPNT 226 >gi|116327483|ref|YP_797203.1| permease [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116331903|ref|YP_801621.1| permease [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116120227|gb|ABJ78270.1| Permease [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125592|gb|ABJ76863.1| Permease [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 386 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 46/366 (12%), Positives = 117/366 (31%), Gaps = 17/366 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K + Y+ + F+ + + + I + + + +++ + Y +P + Sbjct: 25 LKILDRYLFGEFFKVFIGTVVLLTGIMLLSLVNDNMRNFTTTKAPRYHVALFLVYSLPKI 84 Query: 61 LPM-VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + V + + N EL+ + G S ++ P++ IL+ I + Sbjct: 85 ISTTVVSMSLMFSICFTVGQFSVNKELVSMMAAGVSFFRIVAPLILFGILMWIVMLFVTE 144 Query: 120 IIEPKCRSTIK---QLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNTLQG-IF 174 +I K + + L S + ++ + + Y+ N + G + Sbjct: 145 LIVRPVNKLAKIEHDILTEGMGTLANSVYQFHV--KGKEGFYYLYFYDPNKDEINGGFNY 202 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKF--KSYTLQTES 232 I D + + + + + + E K S F K Y L + Sbjct: 203 IRLRNDGSPETVISSLKAKYNYETKLWKMKKVEEWHFDNDLKLSSQESFEEKEYELPEDP 262 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + NL L + +E H + +I LI +A Sbjct: 263 TYFKIPAGSVEEMNLFQLKEEEKRRIQ-KGLSYGDVLTEKHSVFALPMMTIIVTLIGTIA 321 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI--LYLFLFCISSIF 350 ++ + + I++ + +++ F+ + +N P +++ + Sbjct: 322 ---GYFTKKTAGVASLGITIGVVL-IYYIFNSAGKSLGENGVIPPFVGVWITPSLFLGLC 377 Query: 351 LLMIKK 356 M ++ Sbjct: 378 FWMFRR 383 >gi|237799874|ref|ZP_04588335.1| hypothetical protein POR16_13650 [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022729|gb|EGI02786.1| hypothetical protein POR16_13650 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 353 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 49/324 (15%), Positives = 109/324 (33%), Gaps = 16/324 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLV--SSSTESLNILLKISGYLIP 58 M + YI + + FL + I ++ + I+ + + T +L L P Sbjct: 1 MVKLDRYIGKSV---FLAILAVLGIILGLVSLFAFIDEMGDINDTYTLADALSYVFMTAP 57 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + P + L S+ ++EL I+ G S ++ V+ + L + + Sbjct: 58 RRVYDTLPMAALIGCLIGLGSLASSSELTIMRAAGVSIGRIVWAVMKPMLFLMVAGVLVG 117 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF---I 175 + P + + + AQ + L+ D +I I+ PN + G+ Sbjct: 118 EYVAPYAENQAQAARSLAQGSGDAQSARHGLW-HRQGDEFIHINTVQPNGLMLGVTRYRF 176 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 D R T +A+ D L D + S + + + + Sbjct: 177 DDQRHMLTSS--FAKEAHFKTD--YWELKDVSTTHFNEGSTQVINTPEERWDVSLSPQLL 232 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQW--LFPVIFGLISIVAA 293 ST+++ ++S L + + + Y F ++ Q ++ IS + Sbjct: 233 STVIMPPESLSISGLWS-YAHYLADQGLSNGRYWLAFWTKVLQPAVTVALVLMAISFIFG 291 Query: 294 DKRALVRQRKKIHPIFISLSISFG 317 R++ ++ + + + Sbjct: 292 PLRSVTLGQRVFTGVVVGFTFRII 315 >gi|270296760|ref|ZP_06202959.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270272747|gb|EFA18610.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 378 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 60/369 (16%), Positives = 138/369 (37%), Gaps = 19/369 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 +K + YI++ +++ + I+ IA V ++++ S I+ IP Sbjct: 20 LKRLDWYIIKKFLGTYVFAIALIISIAVVFDFNEKMDRFMSHEAPWNAIVFDYYLNFIPY 79 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + +TG S +++P + A ++++ F + Sbjct: 80 FANLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMLRPYMVSAAIIAVVTFCLGS 139 Query: 120 IIEPKC---RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + PK R + K + A T ++ +D + I ++ + F + Sbjct: 140 YVIPKGSVTRINFEDKYYKPRKANTARNIQ----LEVDSGVIAYIERFEDYSKTGYRFSL 195 Query: 177 DS-RDTQTHKIYYAQSGSIDLDRQA-IILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 D D Q A+S + D + D + + + + SI K Sbjct: 196 DKFNDKQLVSHLTARSITYDTTAVHKWKIKDYMIRQMDGMKE--SITKGDRIDTTLFMEP 253 Query: 235 SSTIVLKANDQNLS--FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + +++K + L+ L ++ + E+HKR+ I LI + Sbjct: 254 ADFLIMKNQQEMLTSPQLSEYISRQRQRGFANIKEFEIEYHKRIAMSFASFILTLIGVSL 313 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF-LFCISSIFL 351 + K+ + + I L++SF + F I N P++ ++ + + Sbjct: 314 SSKKT---KGGMGLHLGIGLALSFS-YILFQTIASTFAVNGNMPPVIAVWIPNIMYAFIA 369 Query: 352 LMIKKKYTK 360 + +K K Sbjct: 370 FYLYRKAPK 378 >gi|300770003|ref|ZP_07079882.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC 33861] gi|300762479|gb|EFK59296.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC 33861] Length = 359 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 53/359 (14%), Positives = 120/359 (33%), Gaps = 5/359 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 MK + YI++ +F+ + + + + ++++ ++ I+ + IP Sbjct: 1 MKIIDWYIIKKYLSTFVFTMAIFTVVMVIFDVSEKLDNFLQYKAPISKIVFQYYAGFIPF 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 L ++P + + M TE++ I + G S +++P + A L+ F+ Sbjct: 61 YLNFLSPLINFIAVIFFTSKMADQTEIVPILSGGMSFNRMLRPYMIAASLIFAVTFVFNI 120 Query: 120 IIEPKCRSTIKQLSAK-AQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 I P+ + + ++D + Y+ I ++ + F+++ Sbjct: 121 YIIPRTNKMKVSFENVYVKPDKAGGSISA-THMQIDSNTYVYIDNFDTRQKIGYNFVLEK 179 Query: 179 RDTQTHK-IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 D K A D + + + +++ + K TL + ++ Sbjct: 180 FDADRLKEKMIADRIRWDSVATKWKIENYTNRVINGLNERMEKADQKDTTLDMKPSDFEK 239 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 N L ++ E +KR I L+ + + Sbjct: 240 YDNMFTAMNTDELSKRIDKEETRGTGMMTELLLEKYKRYIYPFSAFILTLMGVS-LSSKK 298 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + I+LS + V FS + P I ++ L +S LM K Sbjct: 299 VRGGIGLSLGLGIALSFVYIVLIQFSTMFSLKGGLPPLIAVMIPNLIFLSLGLYLMYKA 357 >gi|300023218|ref|YP_003755829.1| permease YjgP/YjgQ family protein [Hyphomicrobium denitrificans ATCC 51888] gi|299525039|gb|ADJ23508.1| permease YjgP/YjgQ family protein [Hyphomicrobium denitrificans ATCC 51888] Length = 364 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 60/361 (16%), Positives = 130/361 (36%), Gaps = 14/361 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSST-ESLNILLKISGYLIPTVL 61 + YI R + + + + ++I ++ + + LL+I+ +P + Sbjct: 6 TLTRYIARMFIVAIVTTLTVCALLIFMIDFVELLRMAGKYGAVPGTTLLRIALLRLPAYI 65 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + F + + + L +NR +EL ++ G S + P LF+ + + IF N + Sbjct: 66 EFLIGFAVLVGSISALIYLNRKSELAVMRAGGMSVWQFLGPGLFVGLAVGIFAMAVFNPL 125 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEEN----LFFRLDDDLYIK--ISKYNPNNTLQGIFI 175 + R+T ++L AKA + + D + + N TL G+ + Sbjct: 126 ASRGRATSEKLYAKAFGNEANLLRAQGGGSWIRQNGADGESVLGAAAASNQGLTLTGVLV 185 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + D + H +GS +L L D V R + KFKSY L T Sbjct: 186 F-AYDREGHFSERIDAGSAELKDGYWELQDAWVTRLGQEPE-----KFKSYLLSTYLTPD 239 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPEL-LETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 ++SF P + +L E R ++ L + + + L++ + Sbjct: 240 RVQDALGTVFSISFWDLPELIQAADKAKLSTERLRVQYQSLLVRPMLCLAMVLLAATVSL 299 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + + + + + F + + I P ++ + ++ +++ Sbjct: 300 RSFRSGGIQTMVATGMIGGVGFFLLSEIARQIGIAGLAPAWVAAWMPVVLVLAISTTVLL 359 Query: 355 K 355 Sbjct: 360 H 360 >gi|297565836|ref|YP_003684808.1| permease YjgP/YjgQ family protein [Meiothermus silvanus DSM 9946] gi|296850285|gb|ADH63300.1| permease YjgP/YjgQ family protein [Meiothermus silvanus DSM 9946] Length = 378 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 57/385 (14%), Positives = 121/385 (31%), Gaps = 41/385 (10%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+LR I F + + +L R V + LL+ G IP + Sbjct: 1 MTRIDRYLLREILPPFFFGIFLYIALIAFSNLLARAQWV--GGVPVTSLLQWIGLQIPFI 58 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 P + + ++R ELL++ G S + + +L A L+ F Sbjct: 59 FTQTLPLATLLGVLIGYSRLSRENELLVMQAGGISVLRTARWILLGAAALAGFSLYLSER 118 Query: 121 IEPKCRSTIKQLSA-KAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P + K + ++ D L + S N + + + + Sbjct: 119 VVPWANQQTAVVWWDKVATGTSGLGWLTGRDLKIGDYLLLFDSYDNAHQEIVNVRLQQW- 177 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKS----PISKDISIMKFKSYTLQTESANS 235 QT + +A+ G + + + L ++ P+ S+ + + Y Q A + Sbjct: 178 KGQTLSVVFAERGRL--ENYQLKLRGFRLYTLDLAKLPVPDFQSLDEVEQYLPQLVRAQN 235 Query: 236 STIVLKAN----------------------DQNLSFLLNPNPNNPNYRPELLETYRSEFH 273 + +A+ + NP P R H Sbjct: 236 VSRDPQASLVITLPQNRDQLVANFAGGGFENPYPPSHWWRRLQNPTLTPTEAREARVNLH 295 Query: 274 KRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP 333 L L ++ +++ A +RA + + L++ + + + K+ Sbjct: 296 SALAVSLANLVILFLALPVAARRASS------PAVALGLALGLTIAYYAVLSLGKLMALS 349 Query: 334 YYIPI---LYLFLFCISSIFLLMIK 355 IP ++ ++ + K Sbjct: 350 GLIPAELGVWSANLLAVAVAFWLGK 374 >gi|148651871|ref|YP_001278964.1| permease YjgP/YjgQ family protein [Psychrobacter sp. PRwf-1] gi|148570955|gb|ABQ93014.1| permease YjgP/YjgQ family protein [Psychrobacter sp. PRwf-1] Length = 494 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 39/222 (17%), Positives = 89/222 (40%), Gaps = 3/222 (1%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + + + F+V + ++++ + + + +L I GY +P L Sbjct: 24 ILRRYMTRQVASTTALVLGFLVVLLLGGRMIRYFGIAAEGRLDVGLLFSIIGYNLPYFLE 83 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P F + V + + E+ +++ +G SR L + ++ L ++L + + Sbjct: 84 LVLPLSFFIGLMLVFGRLYVDHEMAVLNGSGISRGRLARLIIPLILVLFVLEAGLSLYGK 143 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGI-FIVDSRD 180 P + + + L+ F + F DD ++ + N N T LQ + I ++D Sbjct: 144 PWGVKNSESIWQQQSLSSAFDLIRPQTFIN-SDDYHLYVGSMNDNKTELQDVILIQTAKD 202 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK 222 A + A+ L E+ + ++ +S + Sbjct: 203 AAKSVKPGATVPEATTNAPAVRLGQQELEGSNSANQSVSSID 244 Score = 48.0 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 27/197 (13%), Positives = 68/197 (34%), Gaps = 16/197 (8%) Query: 180 DTQTHKIYYAQS-----GSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 D I A+ GS + + + L G + S S + F+ Y + Sbjct: 272 DDDRDIIVLAKRAVQVKGSEESGKTQLDLFQGRRYEVGADSLVYSQIGFERYRISINQPP 331 Query: 235 SSTIVLKA-NDQNLSFLLNP-------NPNNPNYRPELLETY--RSEFHKRLTQWLFPVI 284 + + + Q++ L + + PE + ++E RL ++ Sbjct: 332 ADVLTEENVTTQSVPALWKAATGQKVATKADGSTEPEPQQILSAQAELGYRLALPWLIIL 391 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 ++++ A + + ++ P + + V I K + P++ L F Sbjct: 392 APMLAVPLAQVKPRQGRWLRLLPAILIFTSCVLVIISLKNAITKGTLSVLSYPLV-LIGF 450 Query: 345 CISSIFLLMIKKKYTKI 361 + +++L + + ++ Sbjct: 451 IVLALYLNWASRIHHRV 467 >gi|330950945|gb|EGH51205.1| permease YjgP/YjgQ [Pseudomonas syringae Cit 7] Length = 353 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 50/324 (15%), Positives = 110/324 (33%), Gaps = 16/324 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLV--SSSTESLNILLKISGYLIP 58 M + YI + + + L I+ + + I+ + S T +L L P Sbjct: 1 MVKLDRYIGKSVLLAILAVLGIILGLV---SLFAFIDEMGDISDTYTLADALSYVMLTAP 57 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + P + L ++ ++EL I+ G S ++ V+ +LL I + Sbjct: 58 RRVYDTLPMAALIGCLIGLGTLASSSELTIMRAAGVSIGRIVWAVMKPMLLLMIAGVLVG 117 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF---I 175 + P + + + AQ + L+ D +I I+ PN + G+ Sbjct: 118 EYVAPYAENQAQAARSLAQGSGDAQSARHGLW-HRQGDEFIHINTVQPNGLMLGVTRYRF 176 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 D R T +A+ + D L D + S + + + + Sbjct: 177 DDQRHMLTSS--FAKEANFKTD--YWELKDVTTTHFNDGSTKVINTPVERWDVALSPQLL 232 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQW--LFPVIFGLISIVAA 293 ST+++ ++S L + + + Y F ++ Q ++ IS + Sbjct: 233 STLIMPPESLSISGLWS-YAHYLADQGLSNGRYWLAFWTKVLQPAVTVALVLMAISFIFG 291 Query: 294 DKRALVRQRKKIHPIFISLSISFG 317 R++ ++ + + + Sbjct: 292 PLRSVTLGQRVFTGVVVGFTFRII 315 >gi|78212778|ref|YP_381557.1| permease [Synechococcus sp. CC9605] gi|78197237|gb|ABB35002.1| possible permease [Synechococcus sp. CC9605] Length = 386 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 46/330 (13%), Positives = 122/330 (36%), Gaps = 20/330 (6%) Query: 32 ILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDN 91 + + + + + I +++ + IP L P M + V T ++ N+EL + + Sbjct: 45 MFELVRQMVDKNLPITIAVQVLLFSIPRWLAFSVPIGTLMASLFVFTRLSANSELTALRS 104 Query: 92 TGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS----TIKQLSAKAQLALTFSYLEE 147 G + + +I L L++++++F F+ +++ P+ + T+K+ ++ + T + Sbjct: 105 LGITTVRMISAALALSMVMTLFTFVLNDVVVPRSQRYAEVTLKRSLGRSLASETGRDIIY 164 Query: 148 NLFFRLDD----------DLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLD 197 F D + K+ + + + ++D + ++ A + D Sbjct: 165 PRFGTRFDSDGEEDGKGLNQLFYSRKF-QDGEMADVTVLDFTRSGFTQMLRADRAIWNED 223 Query: 198 RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLS---FLLNPN 254 + + DG++ + + + F Y S ++ + N++ L Sbjct: 224 QASWDFLDGQILTLA-ANGSSTKADFDRYVYPLGSGPVRLAGIEKDAVNMTVAEALQAQR 282 Query: 255 PNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSI 314 + R ++ T + ++FGL + + R + + + I Sbjct: 283 LYEEAGSIKEARKIRVRIQEKFTVPMACLVFGLFGATLGAQPSYRSSRSFSFVLTLGI-I 341 Query: 315 SFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 + GFS+ ++ I +L + Sbjct: 342 AVYYVIGFSFSSLGVKGTLPPILAAWLPVM 371 >gi|330752158|emb|CBL87118.1| predicted permease YjgP/YjgQ, transmembrane [uncultured Flavobacteria bacterium] Length = 359 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 62/349 (17%), Positives = 125/349 (35%), Gaps = 14/349 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 M + YI SF + ++ IA V I Q+++ + ++ I++ + Sbjct: 1 MNRLDRYIFFRFLGSFFLFLGLVMMIAVVFDISQKVDNFINKNADISTIIIDYYVNFLAF 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + + T V M R++E++ G S LIKP L A++L I + Sbjct: 61 YGTTFSSLIVFLSTIFVTGRMARDSEIVAALTGGVSFPRLIKPFLLGALVLFIGNSTLSH 120 Query: 120 IIEPKCR-STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 + PK + I Q + + N+ ++ D YI I ++P L G Sbjct: 121 FVIPKTNIARIHFEDTYVQDKIIKRPI--NIHRQVLPDHYIYIETWSPE-RLGGYHFSYE 177 Query: 179 RDTQTHKI--YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT--LQTESAN 234 R I A D ++ +++ R S ++ + + + Sbjct: 178 RFENDRMIEKLMADFVRYDTSQKQWQVDN-WTLRTWLKSGEMKLESGRRLDTSFAFDPTT 236 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 S + + LL E + ++ E+HKR+ +P ++ +A Sbjct: 237 ISPDLRSTSTMTSPQLLKYLKKERISGSEAITSHEMEWHKRIA---YPFSVFILVFIAVV 293 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 + R+ I I L I+ ++ F + + P + + ++L Sbjct: 294 LSSEKRRGGIGGQIAIGLLIAV-IYIFFMQLGGVLVSIPIFSAFMAIWL 341 >gi|291616052|ref|YP_003518794.1| YjgQ [Pantoea ananatis LMG 20103] gi|291151082|gb|ADD75666.1| YjgQ [Pantoea ananatis LMG 20103] Length = 378 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 53/360 (14%), Positives = 135/360 (37%), Gaps = 9/360 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + YI + I + LM+ +V ++ +I+ + ++ S + +P + Sbjct: 23 RVLDRYIGKTIFNTILMTLFMLVSLSGIIKFVDQLRKTGQGAYSALDAGYYTLLSVPKDI 82 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ + +EL+++ G +R+ + V+ AI L + + Sbjct: 83 EIFFPMAALLGALLGLGTLAQRSELVVMQAAGFTRMQVALSVMKTAIPLVLLTMAIGEFV 142 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SRD 180 P+ + A+ + L+ + ++ +I I + ++ + G+ I + + D Sbjct: 143 APQGEQMARNFRAQQLYGGALVSTQSGLWAKDGNN-FIYIERVKGDDEIDGVSIYNFTDD 201 Query: 181 TQTHKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + YA + + D++ +L+ E + P S + + Sbjct: 202 RRLQSVRYAATAKWNKDKKLWVLSQVDESNLTDPKQITGSQSLTGEWKTSLTPDKLGVVA 261 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L + +++ L + + + YR ++ Q L + L+++ + Sbjct: 262 LDPDALSITGLYDYSK-YLKQSGQESGRYRLNMWSKIFQPLSVAVMMLMALSFIFGP--L 318 Query: 300 RQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R + +S F + F + P + IL F F S+F+L+ ++ Sbjct: 319 RSVSMGVRVVTGISFGFLFYVLDQIFGPLSLVYGLPPIFGAILPSFAFFAISLFMLIKRR 378 >gi|160888237|ref|ZP_02069240.1| hypothetical protein BACUNI_00646 [Bacteroides uniformis ATCC 8492] gi|317480118|ref|ZP_07939228.1| hypothetical protein HMPREF1007_02345 [Bacteroides sp. 4_1_36] gi|156862183|gb|EDO55614.1| hypothetical protein BACUNI_00646 [Bacteroides uniformis ATCC 8492] gi|316903665|gb|EFV25509.1| hypothetical protein HMPREF1007_02345 [Bacteroides sp. 4_1_36] Length = 378 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 60/369 (16%), Positives = 138/369 (37%), Gaps = 19/369 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 +K + YI++ +++ + I+ IA V ++++ S I+ IP Sbjct: 20 LKRLDWYIIKKFLGTYVFAIALIISIAVVFDFNEKMDRFMSHEAPWNAIVFDYYLNFIPY 79 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + +TG S +++P + A ++++ F + Sbjct: 80 FANLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMLRPYMVSAAIIAVVTFCLGS 139 Query: 120 IIEPKC---RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + PK R + K + A T ++ +D + I ++ + F + Sbjct: 140 YVIPKGSVTRINFEDKYYKPRKANTARNIQ----LEVDSGVIAYIERFEDYSKTGYRFSL 195 Query: 177 DS-RDTQTHKIYYAQSGSIDLDRQA-IILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 D D Q A+S + D + D + + + + SI K Sbjct: 196 DKFNDKQLVSHLTARSITYDTTAVHKWKIKDYMIRQMDGMKE--SITKGDRIDTTLFMEP 253 Query: 235 SSTIVLKANDQNLS--FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + +++K + L+ L ++ + E+HKR+ I LI + Sbjct: 254 ADFLIMKNQQEMLTSPQLSEYINRQRQRGFANIKEFEIEYHKRIAMSFASFILTLIGVSL 313 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF-LFCISSIFL 351 + K+ + + I L++SF + F I N P++ ++ + + Sbjct: 314 SSKKT---KGGMGLHLGIGLALSFS-YILFQTIASTFAVNGNMPPVIAVWIPNIMYAFIA 369 Query: 352 LMIKKKYTK 360 + +K K Sbjct: 370 FYLYRKAPK 378 >gi|292493020|ref|YP_003528459.1| permease YjgP/YjgQ family protein [Nitrosococcus halophilus Nc4] gi|291581615|gb|ADE16072.1| permease YjgP/YjgQ family protein [Nitrosococcus halophilus Nc4] Length = 354 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 47/356 (13%), Positives = 123/356 (34%), Gaps = 6/356 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y+ + + + L+ L ++ + ++ + + V + L+ + Y IP Sbjct: 1 MKILDRYVAKAVISNTLLVLLVLIALYTFVEFITELEEVGEGNYGVMDALRYTAYSIPQY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + + L S+ +EL+ + G S + + L ++ + + + Sbjct: 61 IYDLLPVAALLGSVLGLGSLAGQSELVAMRAAGFSVGRITRSALATGMIFVVVTILMGEV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + L + A+ E F+ +++ + +I + PN Q I I + + Sbjct: 121 LAPPAKQAANTLRSLAKTGHLSEQAERG-FWTRNNNNFNRIGRVLPNGQYQDIEIFEFDE 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ +G+ R L+D S + + +++ Sbjct: 180 QHRLRVISRAAGA-TYHRDGWHLSDITQRIISSQGITTRRLPEALWESSLSPEMLDVVMV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWL--FPVIFGLISIVAADKRAL 298 + L + + E Y+ F ++ ++F I + R++ Sbjct: 239 DPQQLSAWGLYR-YIDYLEENKQATEQYQQAFWSKVFAPFNTLIMMFLAIPFIFGPLRSV 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 ++ + + + F F+ + E + + LF + +L Sbjct: 298 SMGQRILVGALVGIGF-FLFNRLFNQLGLVFEFSSWLAAAFPSLLFFGLGMVMLRR 352 >gi|330899516|gb|EGH30935.1| permease YjgP/YjgQ [Pseudomonas syringae pv. japonica str. M301072PT] gi|330975730|gb|EGH75796.1| permease YjgP/YjgQ [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 353 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 49/324 (15%), Positives = 110/324 (33%), Gaps = 16/324 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLV--SSSTESLNILLKISGYLIP 58 M + YI + + + L I+ + + I+ + S T +L L P Sbjct: 1 MVKLDRYIGKSVLLAILAVLGIILGLV---SLFAFIDEMGDISDTYTLADALSYVMLTAP 57 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + P + L ++ ++EL I+ G S ++ V+ ++L I + Sbjct: 58 RRVYDTLPMAALIGCLIGLGTLASSSELTIMRAAGVSIGRIVWAVMKPMLVLMIAGVLVG 117 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF---I 175 + P + + + AQ + L+ D +I I+ PN + G+ Sbjct: 118 EYVAPYAENQAQAARSLAQGSGDAQSARHGLW-HRQGDEFIHINTVQPNGLMLGVTRYRF 176 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 D R T +A+ D L D + S ++ + + + Sbjct: 177 DDQRHMLTSS--FAKEAHFKTD--YWELKDVATTHFNDGSTEVVNTPVERWDVALSPQLL 232 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQW--LFPVIFGLISIVAA 293 ST+++ ++S L + + + Y F ++ Q ++ IS + Sbjct: 233 STVIMPPESLSISGLWS-YAHYLADQGLSNGRYWLAFWTKVLQPAVTVALVLMAISFIFG 291 Query: 294 DKRALVRQRKKIHPIFISLSISFG 317 R++ ++ + + + Sbjct: 292 PLRSVTLGQRVFTGVVVGFTFRII 315 >gi|171914738|ref|ZP_02930208.1| permease YjgP/YjgQ family protein [Verrucomicrobium spinosum DSM 4136] Length = 576 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 59/373 (15%), Positives = 132/373 (35%), Gaps = 21/373 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K E Y++R + + + + V+ +L + + S ++ LIP + Sbjct: 176 KILERYVMRSFLQPVMFCFIAFCTLWIVMDLLDNMQDFQENKISRAQIVMFYIKLIPFIF 235 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 V P + T L M+R EL+ + TG S ++KP +A S+ + Sbjct: 236 VTVAPISLLLSTLYTLGRMSRTNELISMLGTGKSMFDVLKPFYVIACCASLLGMAANYHW 295 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEEN-LFFRLDDDLYIKISKYNPN---NTLQGIFIVD 177 P ++L + + ++L ++ +D + + + + ++ I I Sbjct: 296 APVSAGNKEKLLENVKERIGKNFLVMGLMYRNQEDRRTWFVGQVPEDLRGDRMRRIEIRQ 355 Query: 178 SRDTQTHKI-YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK----SYTLQTES 232 D ++A+S DR+ G V + +++ F + E Sbjct: 356 EDDQGRLVKGWFAKSAFWWPDRKVWSFYSG-VEVTYKNGQVVAMQNFDAGGGHPRIDFEG 414 Query: 233 ANSSTIVLKANDQNLSFLLNPN-----PNNPNYRPELLETYRSEFHKRLTQWLFPVIFGL 287 + +L + +L P+ N Y L Y + R T ++ L Sbjct: 415 WTETPWILLSGTLVPDYLGVPDLISYIRGNSAYGQRKLAPYLTHLFYRFTFPWQCLVVVL 474 Query: 288 ISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN---PYYIPILYLFLF 344 + A + +R + + +++ F + + + ++ + N P+ L L Sbjct: 475 FA---APLSVVFSRRGLVGGLSMAVIFFFVLMFMDNLFLNLGKSNVIPPFISVWLPHLLL 531 Query: 345 CISSIFLLMIKKK 357 I+L ++ + Sbjct: 532 GSIGIYLFKLRSQ 544 >gi|289663727|ref|ZP_06485308.1| YjgP/YjgQ family permease [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 360 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 53/358 (14%), Positives = 123/358 (34%), Gaps = 19/358 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L +SFL + + ++ ++ ++ + ++ +LL G Sbjct: 1 MPKLDRYLLSDFTQSFLATLIVLLVVSVGGVLVDILGNIADGRIPARLLLSQVGLQFVAY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP++ P + L + R++E+ +I G +++P+L L + + + + + Sbjct: 61 LPIILPLALMLGLLLALARLYRDSEMAVITAIGVGPKRMLRPMLMLVVPVVVVIGLCSLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSR 179 + P T + + A ++ + LE F L + + + + L +F+ + Sbjct: 121 LGPWASRTAEAMLEDANRSVLMAGLESGQFTPLSGGGVVYMQTISADGKGLGKVFMQ-RQ 179 Query: 180 DTQTHKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISK--DISIMKFKSYTLQTESAN 234 + A G++ + + L+DG D +MKF S + Sbjct: 180 QNDRINVVTADRGAMFFEGKTDRYLRLDDGYRTEGPAGGATLDYRLMKFASSDIALPDRT 239 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + LL+ + T R++ H+RL L + Sbjct: 240 RVHDANDPEVMWTTQLLS----------DERPTARAQLHERLAPPLL--ALAFALLTLPL 287 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 R+ RQ++ + L+ G L+ + ++ + Sbjct: 288 SRSAPRQQRYGRIMLAFLAYMVGTNLMIVGTQWIANGKTPAALGLWWLTLPLLAVAVW 345 >gi|227538454|ref|ZP_03968503.1| permease YjgP/YjgQ family protein [Sphingobacterium spiritivorum ATCC 33300] gi|227241736|gb|EEI91751.1| permease YjgP/YjgQ family protein [Sphingobacterium spiritivorum ATCC 33300] Length = 359 Score = 103 bits (258), Expect = 4e-20, Method: Composition-based stats. Identities = 53/359 (14%), Positives = 119/359 (33%), Gaps = 5/359 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 MK + YI++ +F+ + + + + ++++ ++ I+ + IP Sbjct: 1 MKIIDWYIIKKYLSTFVFTMAIFTVVMVIFDVSEKLDNFLQYKAPISKIVFQYYAGFIPF 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 L ++P + + M TE++ I + G S +++P + A L+ F+ Sbjct: 61 YLNFLSPLINFIAVIFFTSKMADQTEIVPILSGGMSFNRMLRPYMIAASLIFAVTFVFNI 120 Query: 120 IIEPKCRSTIKQLSAK-AQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 I P+ + + ++D + Y+ I ++ + F+++ Sbjct: 121 YIIPRTNKMKVSFENVYVKPDKAGGSISA-THMQIDSNTYVYIDNFDTRQKIGYNFVLEK 179 Query: 179 RDTQTHK-IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 D K A D + + + + + + K TL + ++ Sbjct: 180 FDGDRLKEKMIADRIRWDSVATKWKIENYTNRVINGLHERMDKADQKDTTLDMKPSDFEK 239 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 N L ++ E +KR I L+ + + Sbjct: 240 YDNMFTAMNTDELSKRIDKEETRGTGMMTELLLEKYKRYIYPFSAFILTLMGVS-LSSKK 298 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + I+LS + V FS + P I ++ L +S LM K Sbjct: 299 VRGGIGLSLGLGIALSFVYIVLIQFSTMFSLKGGLPPLIAVMIPNLIFLSLGLYLMYKA 357 >gi|212636934|ref|YP_002313459.1| permease YjgP/YjgQ [Shewanella piezotolerans WP3] gi|212558418|gb|ACJ30872.1| Permease YjgP/YjgQ [Shewanella piezotolerans WP3] Length = 352 Score = 103 bits (258), Expect = 4e-20, Method: Composition-based stats. Identities = 60/349 (17%), Positives = 132/349 (37%), Gaps = 15/349 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +LYI + + S +S L + ++ +I+ + ++ LV T S+ +LIP Sbjct: 1 MRILDLYIAKVLISSSSLSLLILTGLSGIIKWVDQLRLVGRGTYSMMDAGIYVLFLIPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + + N+EL+++ ++G SR+ + + AI L I + + Sbjct: 61 IEMFFPMAVLLGALTGMGMLASNSELVVMQSSGLSRLQIALSAMKTAIPLMILVMLLSEY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P K++ + ++ + D DL++ I +N L+ I + + D Sbjct: 121 VAPVAEVRAKEIQRTQISGGSLIESTRGVWAK-DGDLFVNIGGVVDSNNLRDITLYEFDD 179 Query: 181 TQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 T +A++ + L D ++ + + S + Sbjct: 180 TTNLTSTVHAETAKYM--GKFWQLYDVRRTSLKSEQVVLTNLDEDKWISSLTPEKLSVVS 237 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 +K ++ LL+ + + Y ++L Q + + L+++ Sbjct: 238 VKPESLSIEGLLD-YLDYLKNNKQASARYELALWRKLMQPVTIAVMMLVALSFVFGP--- 293 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 + + + + GV GFS+ I P I +Y IS+ Sbjct: 294 -----LRTVTMGARVLLGVVAGFSFYICSEVFGPLSI--VYGLPAFISA 335 >gi|332307891|ref|YP_004435742.1| permease YjgP/YjgQ family protein [Glaciecola agarilytica 4H-3-7+YE-5] gi|332175220|gb|AEE24474.1| permease YjgP/YjgQ family protein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 353 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 55/363 (15%), Positives = 134/363 (36%), Gaps = 18/363 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K + YI R + + MS +V ++ +I+ ++++ V + + + +P Sbjct: 2 IKILDWYIARTLLSTTAMSLGVLVGLSALIKFIEQMKSVGRGSYDMTVAAVYVFLSLPRE 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + + + N+EL+++ + G SR +I + AIL+ +F+ + Sbjct: 62 LEQFFPMATLIGGLIGMGILASNSELVVMQSAGQSRWNIIISAMKSAILMVLFVMVIGEW 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SR 179 + P + K++ +A + + L + D D ++ I + N L+ + I + Sbjct: 122 VAPISETKAKEIRTQAISG-GSLFSSDRLVWAKDGDNFVSIGEVVDKNNLRDVSIYEFDN 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAI------ILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 D KI A++ + D + +D +H + S Sbjct: 181 DLYLRKITTAEAANYQSDSWELSHVQSTEFSDNRIHVEDAADGAWSS--------SLTPD 232 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + +K ++ L++ N + E YR +++ Q + + L+++ Sbjct: 233 KLGVVTVKPEALSIRGLID-YVNYLENNSQNSERYRLALWRKVLQPISVGVMLLMALSFI 291 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + + F V + + P +I + L + I + + Sbjct: 292 FGPLRSVTMGARVIMGVLTGFGFFVSNEVFGSLSTVYHIPPFIGAI-LPSIVFTGISIHL 350 Query: 354 IKK 356 +++ Sbjct: 351 LRR 353 >gi|327396303|dbj|BAK13725.1| inner membrane protein YjgQ [Pantoea ananatis AJ13355] Length = 358 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 53/360 (14%), Positives = 135/360 (37%), Gaps = 9/360 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + YI + I + LM+ +V ++ +I+ + ++ S + +P + Sbjct: 3 RVLDRYIGKTIFNTILMTLFMLVSLSGIIKFVDQLRKTGQGAYSALDAGYYTLLSVPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ + +EL+++ G +R+ + V+ AI L + + Sbjct: 63 EIFFPMAALLGALLGLGTLAQRSELVVMQAAGFTRMQVALSVMKTAIPLVLLTMAIGEFV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SRD 180 P+ + A+ + L+ + ++ +I I + ++ + G+ I + + D Sbjct: 123 APQGEQMARNFRAQQLYGGALVSTQSGLWAKDGNN-FIYIERVKGDDEIDGVSIYNFTDD 181 Query: 181 TQTHKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + YA + + D++ +L+ E + P S + + Sbjct: 182 RRLQSVRYAATAKWNKDKKLWVLSQVDESNLTDPKQITGSQSLTGEWKTSLTPDKLGVVA 241 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L + +++ L + + + YR ++ Q L + L+++ + Sbjct: 242 LDPDALSITGLYDYSK-YLKQSGQESGRYRLNMWSKIFQPLSVAVMMLMALSFIFGP--L 298 Query: 300 RQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R + +S F + F + P + IL F F S+F+L+ ++ Sbjct: 299 RSVSMGVRVVTGISFGFLFYVLDQIFGPLSLVYGLPPIFGAILPSFAFFAISLFMLIKRR 358 >gi|91204094|emb|CAJ71747.1| hypothetical protein kustc1002 [Candidatus Kuenenia stuttgartiensis] Length = 578 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 52/296 (17%), Positives = 114/296 (38%), Gaps = 32/296 (10%) Query: 2 KSFELYILRCIGRSF---LMSCLFIVFIAWVIQIL-QRINLVSSSTESLNILLKISGYLI 57 + Y++R ++F + ++F+ +VIQIL + +++++ ++ ++++ Y I Sbjct: 52 NILQRYVIREWFQTFWPSFLCFEILMFLGFVIQILHKGLDIIALKALIPHMFIQVAPYSI 111 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 P+ TT ++ + E++ I +G +I PVL + I+ S F + Sbjct: 112 PS--------ALLTATTLTYGRLSADREIIAIQASGIHLRKIITPVLVIGIIFSFFTLVL 163 Query: 118 ENIIEPKCRSTIKQLSAKAQLALTFSYL---EENLFFRLDDDLYIKISKYNPNNTLQGIF 174 I P+ IK L +A + L ++ + I I +N + + Sbjct: 164 SAEILPRSLYQIKLLQERAINNILAGRLATFQKKVLMEPYQ---IYIGNVV-DNINKDVT 219 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKD--ISIMKFKSYTL 228 ++ D I A+ GSI+++ + + L GE + + + + F T Sbjct: 220 VIQYADDYVTDIIIAEEGSIEVNNEKNTIFLTLRKGEFIKPNYKKAEEVPRLGVFTETTF 279 Query: 229 QTESANSSTIVLKANDQNLSFL------LNPNPNNPNYRPELLETYRSEFHKRLTQ 278 + + L ++ N P+ E R E ++L + Sbjct: 280 EIPMGKDKA-DFSTKHMTIFQLFKYNNEIDRELANSKEIPDNFEEARVEASRKLAE 334 Score = 38.0 bits (87), Expect = 2.1, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 43/123 (34%), Gaps = 12/123 (9%) Query: 237 TIVLKANDQNLSFLLNP-----NPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 T L+ ++N+S LL + + +L HKR++Q L + F +I I Sbjct: 448 TKSLEETEKNISVLLRKITSFESDLTLASKKKLRRKNDISIHKRISQALSCLSFIVIGIP 507 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 K + I +SF + Y + +L + + + Sbjct: 508 LGIKLRSSH-------LIIGFGVSFMIILFIYYPLMVTGSVLADDTLLPVVPVLWGANGI 560 Query: 352 LMI 354 L+I Sbjct: 561 LLI 563 >gi|320352233|ref|YP_004193572.1| permease YjgP/YjgQ family protein [Desulfobulbus propionicus DSM 2032] gi|320120735|gb|ADW16281.1| permease YjgP/YjgQ family protein [Desulfobulbus propionicus DSM 2032] Length = 360 Score = 103 bits (257), Expect = 5e-20, Method: Composition-based stats. Identities = 49/362 (13%), Positives = 124/362 (34%), Gaps = 12/362 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YIL R+ M + + +I ++I+ +S +++ IP + Sbjct: 1 MILLYRYILAHFLRNLGMIMASFITLYLLIDFFEKIDNFLEKGKSFSLIATFFFANIPFI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +++P C + L +N + EL+ + G + P++ A+ ++ + Sbjct: 61 IDLMSPVCILLAGVVTLGVLNHSNELIALKACGIPLKKITVPIIGAALACTLLFLAMDQY 120 Query: 121 IEPKCRSTIKQ-LSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + PK + Q + + + + ++ + + S+ +P L F Sbjct: 121 VLPKTIAVTNQIWNKEIKGKVPLGIYRNGRYYYRGQEGFYSFSRPDPQKNLFKNFSYTVW 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS--T 237 D + + ++ L +G++ K+ + F + + Sbjct: 181 DKEHAANTLIAAEIAVWNKGVWTLRNGQIQ-KAAGGDRFATQVFTNRRINFPETPDDFFV 239 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 ++ + +L L + + E ++F+ R++ + L+ + Sbjct: 240 PAYRSMELSLVQLYKETQHTRS--EEERSKAWADFYGRIS--YTLLGLPLLLLGLPLLLL 295 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY----LFLFCISSIFLLM 353 + R+ + + I +S Y + YIP L + L F L+ Sbjct: 296 VYRKWGRDLSLAIPVSCGMAFLCWGVYTTLQSLAKASYIPPLAAAISVHLLVGCVGFFLL 355 Query: 354 IK 355 ++ Sbjct: 356 LR 357 >gi|291514726|emb|CBK63936.1| Predicted permeases [Alistipes shahii WAL 8301] Length = 367 Score = 103 bits (257), Expect = 5e-20, Method: Composition-based stats. Identities = 50/363 (13%), Positives = 121/363 (33%), Gaps = 14/363 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPTV 60 K + YIL ++ + I+ I V +++I+ + L +++L IP Sbjct: 9 KILDRYILGKFLSTYFFAIAMIIVIVVVFDYVEKIDDFTELHAPLKSVILDYYLNFIPYF 68 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + + + M TE++ + + G S L+ P A++++ Sbjct: 69 INQFSGLFTFIACIFFTSKMAYQTEIVAMLSGGMSFRRLMWPYFLGALIIASLSLTLNLW 128 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + I + + + +++ +++ ++ I YN F+++ + Sbjct: 129 LIPISQRHIVAFEQQYIKRKQNTKYDRHIYRQIEPGIFAYIRGYNDGARQASFFVLERYE 188 Query: 181 TQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT--LQTESANSST 237 + T A + + + R+ + + +F++ + E+ Sbjct: 189 SGTMTHSLEASDAKFNPETKRWTAPR-YTKREFDSAGTETFEQFRNLDTLINLEATELGE 247 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 I N+S L + + E H R L I LI + Sbjct: 248 INDLIQTMNISELNAFLDQQRAKGSDSINLIEVEKHARYAYPLSTFILTLIGVSL----- 302 Query: 298 LVRQRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLFL---FCISSIFLLM 353 R+ + + I + + F+ + ++ P L ++L + L Sbjct: 303 SSRKVRGGTGLHIGIGTGLCFSYILFNRFFEEFAKSGTLPPGLAVWLPNIIYLGIAVYLY 362 Query: 354 IKK 356 K Sbjct: 363 RKA 365 >gi|119357818|ref|YP_912462.1| permease YjgP/YjgQ family protein [Chlorobium phaeobacteroides DSM 266] gi|119355167|gb|ABL66038.1| permease YjgP/YjgQ family protein [Chlorobium phaeobacteroides DSM 266] Length = 358 Score = 103 bits (257), Expect = 5e-20, Method: Composition-based stats. Identities = 45/348 (12%), Positives = 116/348 (33%), Gaps = 12/348 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI R SF + + + +I +++ ++ + IP+ Sbjct: 1 MKLLDRYIFRQFAVSFFFASAAFIALFILISMVENLDEFIDLGIGPGKITGYYLSSIPST 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + +P + V ++ +EL I + G S L+KP + ++ ++ Sbjct: 61 LMVTSPVAALLSAILVAGKLSAMSELSAIKSAGISLKQLLKPFVLGGTIICSINMLNSCW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRL--DDDLYIKISKYNPNNTLQGIFIVDS 178 + P +++ + L+ N + + + I + N + +G+ I Sbjct: 121 LGPAA--AADKIAFERTSFNRTQNLQANSNMHILESGNRIVSIGELLINQS-KGLHISIE 177 Query: 179 RDTQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKF-KSYTLQTESANS 235 + T + + D+ +L + + ++ + + + + Sbjct: 178 QFNGTRLSTRMDAPEMIFDQNVHKWVLKETSSRSFTGNNEQYHLNPGNDTLGMAMSLKSL 237 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + ++ ++ N+ L+ + + H ++ +I LI + Sbjct: 238 RKLNVQPDEMNILEHYRYTREKDKAGFSGLDRAKVKLHAKIALPFASLISILIGVPL--- 294 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 + +R+R F ++ G I I P + +L Sbjct: 295 -STIRKRGGKAAEFSITLFIGFLYLGLQKTIATIGYTGLLEPWIAAWL 341 >gi|218551559|ref|YP_002385351.1| hypothetical protein EFER_4344 [Escherichia fergusonii ATCC 35469] gi|218359101|emb|CAQ91762.1| conserved hypothetical protein; putative inner membrane protein [Escherichia fergusonii ATCC 35469] gi|324112113|gb|EGC06091.1| inner membrane protein yjgQ [Escherichia fergusonii B253] gi|325499820|gb|EGC97679.1| hypothetical protein ECD227_3917 [Escherichia fergusonii ECD227] Length = 360 Score = 103 bits (257), Expect = 5e-20, Method: Composition-based stats. Identities = 59/363 (16%), Positives = 126/363 (34%), Gaps = 15/363 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + + I++ ++ + + + L + +P Sbjct: 5 GVLDRYIGKTI---FTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVP 61 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L + + +EL+++ +G +R+ + V+ AI L + Sbjct: 62 KDIQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIG 121 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-- 176 + P+ + A+A + +E L+ + + ++ I + L GI I Sbjct: 122 EWVAPQGEQMARNYRAQAMYGGSLLSTQEGLWAKDGKN-FVYIERVKGEKELGGISIYAF 180 Query: 177 -DSRDTQTHKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESAN 234 D R + I YA S + D D + L+ E +P S ++ Sbjct: 181 NDQR--RLQSIRYAASATFDPDNKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDK 238 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + L + ++S L N + Y+ ++ Q L + L+++ Sbjct: 239 LGVVALDPDALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIF 297 Query: 295 KRALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 IS F V F + P +L F + S++LLM Sbjct: 298 GPLRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLM 357 Query: 354 IKK 356 + Sbjct: 358 RRA 360 >gi|218661972|ref|ZP_03517902.1| putative permease protein [Rhizobium etli IE4771] Length = 115 Score = 103 bits (257), Expect = 5e-20, Method: Composition-based stats. Identities = 44/105 (41%), Positives = 69/105 (65%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YILR +G+ FL++ L ++ I W Q+LQRINLV+ S +S+ K++ ++P++ Sbjct: 11 MKLLETYILRGVGQMFLVALLPVLAIIWTTQVLQRINLVTDSGQSIGSFAKLATMILPSI 70 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLF 105 +P+V PF + T LT+MN ++EL +ID G R LI+P+L Sbjct: 71 IPVVLPFALVIAITQTLTTMNNDSELTVIDAAGARRSILIRPILL 115 >gi|189465688|ref|ZP_03014473.1| hypothetical protein BACINT_02049 [Bacteroides intestinalis DSM 17393] gi|189433952|gb|EDV02937.1| hypothetical protein BACINT_02049 [Bacteroides intestinalis DSM 17393] Length = 378 Score = 103 bits (257), Expect = 5e-20, Method: Composition-based stats. Identities = 56/361 (15%), Positives = 137/361 (37%), Gaps = 18/361 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 +K + YI++ +++ + I+ IA V ++++ S I+ +P Sbjct: 20 LKRLDFYIIKKFLGTYVFAIALIISIAVVFDFNEKMDKFMSHEAPWKAIVFDYYLNFVPY 79 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + +TG S +++P + A ++++ F + Sbjct: 80 FANLFSPLFVFISVIFFTSKLAENSEIIAMFSTGMSFKRMLRPYMVSAAIIAVVTFCLGS 139 Query: 120 IIEPKC---RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + PK R + K + + T ++ +D + I ++ + F + Sbjct: 140 YVIPKGSVTRINFEDKYYKQRKSNTARNIQ----LEVDSGVIAYIERFEDYSKTGYRFSL 195 Query: 177 DS-RDTQTHKIYYAQSGSIDLDRQA-IILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 D +D Q A+S + D + D + + ++ I+K Sbjct: 196 DKFKDKQLVSHLTARSITYDTASVHKWTIKDYMIREMDGMKEN--IVKGDRIDSILFMEP 253 Query: 235 SSTIVLKANDQNLS--FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + +++K + ++ L ++ + E+HKR+ I LI + Sbjct: 254 ADFLIMKNQQEMMTSPELSEYISRQRQRGFANIKEFELEYHKRIAMSFASFILTLIGVSL 313 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 + K+ + + I L++SF + F I N P++ +++ I F+ Sbjct: 314 SSKKT---KGGMGLHLGIGLALSFS-YILFQTIASTFAVNGNVPPVVAVWIPNILYAFIA 369 Query: 353 M 353 Sbjct: 370 F 370 >gi|21244280|ref|NP_643862.1| hypothetical protein XAC3555 [Xanthomonas axonopodis pv. citri str. 306] gi|21109928|gb|AAM38398.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 360 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 54/358 (15%), Positives = 124/358 (34%), Gaps = 19/358 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L +SFL + + ++ ++ ++ + ++ +LL G Sbjct: 1 MPKLDRYLLSDFTQSFLATLIVLLVVSVGGVLVDILGNIADGRIPARLLLSQVGLQFVAY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP++ P + L + R++E+ +I G +++P+L L + + + + + Sbjct: 61 LPIILPLALMLGLLLALARLYRDSEMAVITAIGVGPRRMLRPMLMLVVPVVVVIGLCSLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSR 179 + P T K + A ++ + LE F L + + + + L +F+ + Sbjct: 121 LGPWASRTAKAMLEDANRSVLMAGLESGQFTPLSGGGVVYLQTISADGKGLGKVFMQ-RQ 179 Query: 180 DTQTHKIYYAQSGSI---DLDRQAIILNDGEVHRK--SPISKDISIMKFKSYTLQTESAN 234 + A G++ + + L+DG S + D +MKF S + Sbjct: 180 QNDRIDVVTADRGAMFFEGKTDRYLRLDDGYRTEGPASGATLDYRLMKFASSDIALPDRT 239 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + LL+ + R++ H+RL L + Sbjct: 240 RVHDANDPEVMWTTQLLS----------DERPAARAQLHERLAPPLL--ALAFALLTLPL 287 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 R+ RQ++ + L+ G L+ + ++ + Sbjct: 288 SRSAPRQQRYGRIMLAFLAYMVGTNLMIVGTQWIANGKTPAALGLWWLTLPLLAVAVW 345 >gi|84387841|ref|ZP_00990856.1| hypothetical protein V12B01_07608 [Vibrio splendidus 12B01] gi|84377356|gb|EAP94224.1| hypothetical protein V12B01_07608 [Vibrio splendidus 12B01] Length = 356 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 59/361 (16%), Positives = 135/361 (37%), Gaps = 14/361 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +LYI R I + + + V ++ +I+ ++++ V T L L +P + Sbjct: 3 KILDLYIGRTIIATTSLVLVTFVGLSGIIKYVEQLRKVGRGTYDLLQALYFVLLSVPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++ + VL AI L I + + Sbjct: 63 EMFFPMAALLGALIGLGMLAASSELVVMQAAGFSKLDIGLSVLKTAIPLMIVVTLLGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + L + + ++ R +D +I + K + + Sbjct: 123 APQAQKMARDLRTISIAGGNIISTQSGVWARDAND-FIFVVKIDDEKLYGLNMWRFDENK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK--SYTLQTESANS--ST 237 Y++ D +ND E+ +I I K +Y+ +T A + Sbjct: 182 ALKTAIYSEEVDYVGD-NVWTMNDVEITSFE---NEIQITKESLPTYSWKTSLAPDKLAI 237 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADK 295 + +K + +LS L + + + Y +++TQ + + L++ + Sbjct: 238 VTVKPEELSLSGLYD-YVSYLKASEQDASRYELALWRKITQPISIAVMMLMALSFIFGPL 296 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 R++ + + + + F + F + + Q P L + + +L+ + Sbjct: 297 RSVTMGARILSGVIAGFT--FYISSEFFGPVSLVYQIPPAFGALAPSVVFLGIAIMLLRR 354 Query: 356 K 356 K Sbjct: 355 K 355 >gi|28868484|ref|NP_791103.1| hypothetical protein PSPTO_1273 [Pseudomonas syringae pv. tomato str. DC3000] gi|213968382|ref|ZP_03396526.1| membrane protein [Pseudomonas syringae pv. tomato T1] gi|301384648|ref|ZP_07233066.1| hypothetical protein PsyrptM_18507 [Pseudomonas syringae pv. tomato Max13] gi|302058899|ref|ZP_07250440.1| hypothetical protein PsyrptK_02847 [Pseudomonas syringae pv. tomato K40] gi|302133012|ref|ZP_07259002.1| hypothetical protein PsyrptN_16559 [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28851722|gb|AAO54798.1| membrane protein, putative [Pseudomonas syringae pv. tomato str. DC3000] gi|213927020|gb|EEB60571.1| membrane protein [Pseudomonas syringae pv. tomato T1] gi|331015231|gb|EGH95287.1| hypothetical protein PLA106_04712 [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 353 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 53/362 (14%), Positives = 117/362 (32%), Gaps = 16/362 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLV--SSSTESLNILLKISGYLIP 58 M + YI + + FL + I ++ + I+ + + T +L L P Sbjct: 1 MVKLDRYIGKSV---FLAILAVLGIILGLVSLFAFIDEMADINDTYTLVDALSYVMMTAP 57 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + P + L ++ ++EL I+ G S ++ V+ +LL + + Sbjct: 58 RRVYDTLPMAALIGCLIGLGTLASSSELTIMRAAGVSIGRIVWSVMKPMLLLMVAGVLVG 117 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF---I 175 + P + + + AQ + L+ D +I I+ PN + G+ Sbjct: 118 EYVAPYAENQAQAARSLAQGSGDAQSARHGLW-HRQGDEFIHINTVQPNGLMLGVTRYRF 176 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 D R T +A+ D L D ++ + + + Sbjct: 177 DDQRHMLTSS--FAKEAHFKTD--YWELKDVSTTHFKEGRTEVVNAPDERWDVSLSPQLL 232 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 ST+++ ++S L + + + Y F ++ Q V L++I Sbjct: 233 STVIMPPESLSISGLWS-YAHYLADQGLSNGRYWLAFWTKVLQPAVTVALVLMAISFIFG 291 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 +R +F + + F + + + L + L + Sbjct: 292 P--LRSVTLGQRVFTGVVVGFTFRIIQDLLGPSSLLFGFPPLLAVLIPAAACAFAGLYLL 349 Query: 356 KK 357 ++ Sbjct: 350 RR 351 >gi|269468373|gb|EEZ80038.1| permease [uncultured SUP05 cluster bacterium] Length = 360 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 58/367 (15%), Positives = 138/367 (37%), Gaps = 14/367 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI + + + L + +V I + L+ + + ++ +L L G LIP++ Sbjct: 1 MKILDRYIAKTLLKYSLSVMVVLVGIFAFFKFLEEVGDIGRASYTLFDALAYVGLLIPSI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ + L + N+EL+I+ G S + + K L ++++ + + I Sbjct: 61 VYALSSLIILLGCILGLGYLAGNSELIIMRGAGISVVEITKTTLKVSLVFIVIMIIFGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI-FIVDSR 179 I P K+ A+A S ++ F+ D + +I++ K + I I + Sbjct: 121 ISPLFSDYAKKYRAQALGESVISSSQQG-FWLRDGNNFIQVDKNIDGRIFEKITLINLNT 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK--DISIMKFKSYTLQTESANS-- 235 + + Y+ D + ++L H+ + + I + Y + Sbjct: 180 PSTLDSVVYSDKA--VFDGKNMVLQKSNYHQINSDQEFAAIDQKTLQQYLTEVAFDQELI 237 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAA 293 ++ + + + L + + Y E ++R+ + L + +++ V Sbjct: 238 KSLKKEPKEFSTWQLFRR-VQFLSNNDLSADIYEVELYQRIMKPLTLIAMIILALPFVFG 296 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 R RK + ISL G + + ++ L + + + M Sbjct: 297 SLRDSSLGRKIFTGVVISLFFELSSRLGGMISLRF---DLNHLLSASLPTIVVFVLAIFM 353 Query: 354 IKKKYTK 360 +++ T+ Sbjct: 354 LRRVSTR 360 >gi|332530550|ref|ZP_08406488.1| permease YjgP/YjgQ [Hylemonella gracilis ATCC 19624] gi|332039996|gb|EGI76384.1| permease YjgP/YjgQ [Hylemonella gracilis ATCC 19624] Length = 373 Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 56/366 (15%), Positives = 132/366 (36%), Gaps = 25/366 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ I + + RSF + + +V + + +++ + S + ++ + GY + T +P Sbjct: 2 LFDSSIRKELARSFGGTVIVLVTVLVTMTLIRVLGQASRGNFNPADVMLVMGYTVVTFMP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + + L+ + ++E++I ++ L+ +L A + + + + + Sbjct: 62 SMMSLALFVAVVMTLSRLYADSEMVIWFSSRVGLARLLPALLRFAWPVLLAIALLSLLAL 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQ--GIFIVDSRD 180 P +S I +L + +E F D + + L+ +F+ + + Sbjct: 122 PWAKSQINELQRQFSQRNDLERIEPGQFQTSADGSRVFFIEKGDIGELKANNVFVA-TDE 180 Query: 181 TQTHKIYYAQSGS--IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL---QTESANS 235 + A+ G + + +IL G+ + + +F+ Y + Q + Sbjct: 181 GNKKTVISARQGYTELVGGDRFLILEHGQRLETRADEPGMRVAEFEHYRMLVVQDPLGDG 240 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 L A L LL P+ N E R+ L V LI A Sbjct: 241 GPTSLGAR-PTLDLLLTPSRENLG-----------ELSMRVGHPL--VALQLIIFALAYT 286 Query: 296 RALVRQRKKIHPIFISLSISFG---VFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 R R + + I + + G S+I ++ +++ L + ++L Sbjct: 287 RVNPRVSRTGNLILSLMLFQILQNMINIGQSWIRQGAVNFWAFMLLMHGGLLLAAMVWLA 346 Query: 353 MIKKKY 358 + + + Sbjct: 347 LRHRAW 352 >gi|42524172|ref|NP_969552.1| hypothetical protein Bd2760 [Bdellovibrio bacteriovorus HD100] gi|39576380|emb|CAE80545.1| conserved hypothetical protein [Bdellovibrio bacteriovorus HD100] Length = 359 Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 53/362 (14%), Positives = 127/362 (35%), Gaps = 12/362 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y F+ L + + + + +V+ + + L+ Y P + Sbjct: 1 MNRIDRYTAWLFVGYFVGGLLVFLTLFTAVDAMS--TMVNYKDVAPSALVNYYLYSFPGI 58 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + LTS+N+ EL+ + +G S I + P+L L ++S +++ + Sbjct: 59 ISQLLPVACLLGVILTLTSLNKANELVALFASGMSLIRIAVPMLLLVAVISALGYMAADR 118 Query: 121 IEPKCRSTIKQLSAK--AQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVD 177 + P+ + + FS + + + + I N QG+ + Sbjct: 119 VLPRATKQKNYILYYDLKKEPHRFSTIRTDRIWYRSKNSIFNIKTLNAKGDGAQGLTMYF 178 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS- 236 D + + + + + +L G V + S FK+ ++ + Sbjct: 179 FSD-EWDLVQMITAAQVKIQGAQWLLEQGTVTIFNKDSSFPLTSPFKTKSIVMAEDSKDL 237 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + D L + Y ++H +++ ++ L+ I + R Sbjct: 238 QSAGQTADMMSQKELEHFIDKNKAAGLDTVAYEVDYHSKISFAFAGLVMCLLGIPFSVGR 297 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI--LYLFLFCISSIFLLMI 354 A R + + I L++ F + F + Q+ P+ + + + +++ Sbjct: 298 A--RSGGTMLNVGICLALVFAYYV-FYSSGITLGQHGTLPPVAAAWAPNIVMLGVAFVLL 354 Query: 355 KK 356 KK Sbjct: 355 KK 356 >gi|183219955|ref|YP_001837951.1| hypothetical protein LEPBI_I0537 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910079|ref|YP_001961634.1| permease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167774755|gb|ABZ93056.1| Permease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778377|gb|ABZ96675.1| Conserved hypothetical protein; putative membrane protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 378 Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 51/361 (14%), Positives = 130/361 (36%), Gaps = 10/361 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 ++ + Y+ ++F+ + + + + + + + + SS + + + Y +P+++ Sbjct: 19 RTLDRYLFFDFFKTFIGTLIMLTSMIVIYKFTDVMKYLVSSKVNQSHVYLHVLYSLPSMV 78 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILL-SIFLFISENI 120 V V+ + N EL+ + G S + +I P+LF I++ + + + Sbjct: 79 DQVVAPALMFSVCFVIGQFSVNKELVAMMVAGVSFMRIITPILFFGIVIWLVMTLFGQIV 138 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P ++ Q S A+ + L + Y NT++G F Sbjct: 139 VIPANKNAQIQFSIMAKGSNRLIDFVYQLHIKGKKGFYYVYWIDEKENTIKGGFNYFEIT 198 Query: 181 TQTHKIYY--AQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKF--KSYTLQTESANSS 236 + Y +Q + +L D E R + + +S K+ K+Y + A S Sbjct: 199 PDGYPTYTVSSQKAKFIPSPHSWVLYDAEEVRFNENLELVSRTKYAEKTYDFPEDLAYFS 258 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + N L + + + + H + L + + A Sbjct: 259 KPIRNPEEMNFFELAD-EIQSRITKGIPFRNVIVQQHMAFSMPLMSFVVVTLG---ALAG 314 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFLLMIK 355 A+ ++ + + +++++ + S E I I +++ ++ + + Sbjct: 315 AITKRSAGVASLGLTIAVVLLYYILNSTAKTLAENGALPIWIGMWITPVIFTTAAYYLYR 374 Query: 356 K 356 K Sbjct: 375 K 375 >gi|109899861|ref|YP_663116.1| permease YjgP/YjgQ [Pseudoalteromonas atlantica T6c] gi|109702142|gb|ABG42062.1| permease YjgP/YjgQ [Pseudoalteromonas atlantica T6c] Length = 353 Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 51/356 (14%), Positives = 131/356 (36%), Gaps = 5/356 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K + YI R + + MS +V ++ +I+ ++++ V + + + +P Sbjct: 2 IKILDWYIARTLLSTTAMSLGVLVGLSALIKFIEQMKSVGRGSYDMTVAAVYVFLSLPRE 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + + + N+EL+++ + G SR +I + AIL+ +F+ + Sbjct: 62 LEQFFPMATLIGGLIGMGILASNSELVVMQSAGQSRWNIIISAMKSAILMVLFVMVIGEW 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + K++ +A + + L + D D ++ I + +TL+ + I + + Sbjct: 122 VAPVSETKAKEIRTQAISG-GSLFSSDRLVWAKDGDNFVSIGEVVDKDTLRDVSIYEFDN 180 Query: 181 TQ-THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +I A+S + + L+ + S + ++ + Sbjct: 181 ELYLRQITTAESATYQ--DKTWELSHVQSTEFSDNRIQVQDAADGAWASSLTPDKLGVVT 238 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 +K ++ L++ N + E YR +++ Q + + L+++ Sbjct: 239 VKPEALSIRGLID-YVNYLENNSQNSERYRLALWRKVLQPISVGVMLLMALSFIFGPLRS 297 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + F V + + P +I + + L+ + Sbjct: 298 VTMGARVIMGVLTGFGFFVSNEVFGSLSTVYHIPPFIGAILPSVVFTGISIHLLRR 353 >gi|148977743|ref|ZP_01814299.1| hypothetical protein VSWAT3_21150 [Vibrionales bacterium SWAT-3] gi|145962957|gb|EDK28227.1| hypothetical protein VSWAT3_21150 [Vibrionales bacterium SWAT-3] Length = 356 Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 59/359 (16%), Positives = 134/359 (37%), Gaps = 10/359 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +LYI R I + + + V ++ +I+ ++++ V T L L IP + Sbjct: 3 KILDLYIGRTIIATTSLVLVTFVGLSGIIKYVEQLRKVGRGTYDLLQALYFVLLSIPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++ + VL AI L I + + Sbjct: 63 EMFFPMAALLGALIGLGMLAASSELVVMQAAGFSKLDIGFSVLKTAIPLMIVVTLLGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + L + + ++ R +D +I I K + + + Sbjct: 123 APQAQKMARDLRTISIAGGNIISTQSGVWARDAND-FIFIVKIDDDKLYGMNMWRFDENK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--STIV 239 Y++ D + D V + I+ +YT +T A + + Sbjct: 182 ALKTAIYSKEVDYVGD-NVWTMKDVVVTSFENELQ-ITKENLPTYTWKTSLAPDKLAIVT 239 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADKRA 297 +K + +LS L + + + Y +++TQ + + L++ + R+ Sbjct: 240 VKPEELSLSGLYD-YVSYLKASEQDAARYELALWRKITQPISIAVMMLMALSFIFGPLRS 298 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + + + + F + F + + Q P +L + + +L+ +K Sbjct: 299 VTMGARILSGVIAGFT--FYISSEFFGPVSLVYQIPPAFGVLAPSVVFLGIAVMLLRRK 355 >gi|91792233|ref|YP_561884.1| permease YjgP/YjgQ [Shewanella denitrificans OS217] gi|91714235|gb|ABE54161.1| permease YjgP/YjgQ [Shewanella denitrificans OS217] Length = 351 Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 53/349 (15%), Positives = 130/349 (37%), Gaps = 15/349 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 +LYI R I + + L + ++ +I+ + ++ LV + ++ +LIP + Sbjct: 2 ILDLYIARAILATSSLCLLILTGLSGIIKWVDQLRLVGRGSYTMIDAGIYVLFLIPRDIE 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M P + + + ++EL+++ +G SR+ + + A+ L + + + Sbjct: 62 MFFPMAVLLGALIGMGMLASSSELVVMQASGMSRLQISMSAMKTAVPLMLLVMVLGEWGA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT- 181 P + K+L A + ++ + D DL++ I + N+L I + + + Sbjct: 122 PVAERSAKELQATKLSGGSLIKSHRGIWAK-DGDLFVNIGEVETVNSLNNITLYEFDEAM 180 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + K+ +AQ + + V I+ + +S+ + +K Sbjct: 181 KLVKVIHAQEAQFKDEAWQLQQVKTTVFSDEKITLVEQPL--QSWNSSLTPDKLGVVSVK 238 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 ++ LL+ + + Y +++ Q + + L+++ Sbjct: 239 PEALSIQGLLD-YLDYLEVNQQDPSRYNLALWRKIMQPVTIAVMMLVALSFVFGP----- 292 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 + + + + GV GF + I P I +Y + +I Sbjct: 293 ---LRTVTMGARVLLGVVAGFGFYISNQIFGPMSI--VYELPAAVGAIA 336 >gi|150024706|ref|YP_001295532.1| hypothetical protein FP0611 [Flavobacterium psychrophilum JIP02/86] gi|149771247|emb|CAL42716.1| Protein of unknown function [Flavobacterium psychrophilum JIP02/86] Length = 361 Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 54/363 (14%), Positives = 132/363 (36%), Gaps = 9/363 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + YIL+ +FL+ L + I + I ++IN + + ++ +L I Sbjct: 2 LTILDKYILKRYLATFLVMLLLFIPIGITVDIAEKINKILENKVPIDKVLSYYVDFIIYF 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + NTE++ I ++G S ++P + A ++S F + Sbjct: 62 TNFLFPIFLFLSIIWFTAKLANNTEIIAILSSGISFSRFLRPYIIGATIVSFFALLMGFF 121 Query: 121 IEPKCRSTIK--QLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 + PK K + +++ ++ + +I +S ++ F+ + Sbjct: 122 LAPKASEGFKNFRYLYLIGNGKDEMRETNDVYRQISETEFIYVSNFDIEAKTAYNFVFEK 181 Query: 179 RDTQTHKI-YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + A S + + L + ++ I K + + + Sbjct: 182 FNAEKLVYKISASSIQWNSKEKTYTLLNYSKRTVGALNDKIETENSKPMKFNFDLEDLTP 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +V A + + L + TY +++ + + I +I++ + Sbjct: 242 VVYIAETLSFTDLNKFIEKEKKRGSANINTYLVVKYRKYSIPISAFILTIIAVAV---SS 298 Query: 298 LVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + R+ + I ++I+F + F+ + K P + F+F I + +LL Sbjct: 299 MKRRGGMGMNLAIGIAIAFSYIFLDKIFATLAEKSSIEPIIAIWIPNFIFGILAFYLLRN 358 Query: 355 KKK 357 K+ Sbjct: 359 AKR 361 >gi|170723396|ref|YP_001751084.1| permease YjgP/YjgQ family protein [Pseudomonas putida W619] gi|169761399|gb|ACA74715.1| permease YjgP/YjgQ family protein [Pseudomonas putida W619] Length = 353 Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 50/361 (13%), Positives = 131/361 (36%), Gaps = 14/361 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + + L I+ +A + + ++ + S T ++ + P Sbjct: 1 MVKLDRYIGQSVLMAILAVLGIILGLASLFAFIDEMSDL-SDTYTVMDAGWFTLLTAPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L S+ ++EL I+ G S ++ V+ ++L + + Sbjct: 60 LYDMLPMAALIGCLIGLGSLASSSELTIMRAAGVSIGRIVWAVMKPMLVLMLVGLLIGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + AQ + ++ D ++ I+ PN L G+ D Sbjct: 120 VAPISENKAQADRSLAQGGGEAQSSKRGMW-HRQGDEFVHINSVQPNGLLLGVTRYRFDD 178 Query: 181 TQTHKI-YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + +A+ + D +L+D ++ + + + +T+V Sbjct: 179 ERKIVTSSFARRARYENDH--WVLSDVSTTYFRGDHTEVVKSSEERWDVSVTPQLLNTVV 236 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQW--LFPVIFGLISIVAADKRA 297 L +++ L + + + + Y F ++ Q ++ IS + R+ Sbjct: 237 LAPESLSITGLWD-YIHYLSDQGLNNARYWLAFWTKVLQPAVTAALVLMAISFIFGPLRS 295 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY-LFLFCISSIFLLMIKK 356 + ++ +F + + F ++ Q + P+L + + ++ L + + Sbjct: 296 VTLGQR----VFTGVLVGFVFRIAGD-LLGPSSQVFGFPPLLAVVIPAGVCALAGLWLLR 350 Query: 357 K 357 + Sbjct: 351 R 351 >gi|70728450|ref|YP_258199.1| hypothetical protein PFL_1068 [Pseudomonas fluorescens Pf-5] gi|68342749|gb|AAY90355.1| membrane protein, putative [Pseudomonas fluorescens Pf-5] Length = 353 Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 53/361 (14%), Positives = 125/361 (34%), Gaps = 17/361 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLV--SSSTESLNILLKISGYLIP 58 M + YI + + L I+ +A + I+ + + T ++ ++ P Sbjct: 1 MVKLDRYIGSSVFMAILAVLGIILGLA---SLFAFIDEMGAVNETYTVVDVMSYVALTAP 57 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L S+ N+EL I+ G S ++ V+ ++L + + Sbjct: 58 RRVYEMLPMAGLIGCLIGLGSLASNSELTIMRAAGVSVGRIVWAVMKPMLVLMLVGVLVG 117 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI---FI 175 + P + + A AQ + + L+ D +I I+ PN L G+ Sbjct: 118 EYVAPATETQAQASRALAQGSGDAQSSKHGLW-HRQGDEFIHINAVQPNGLLYGVTRYHF 176 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 D R + +A+ D L D ++ + + + + Sbjct: 177 DDQRHMLSSS--FARQARFHED--YWQLTDVTTTYFRDGHTEVISVPGERWDVALSPQLL 232 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWL--FPVIFGLISIVAA 293 ST+V+ ++S L + + Y F ++ Q L ++ IS + Sbjct: 233 STVVMAPESLSISGL-WGYIHYLADQGLNNGRYWLAFWVKVLQPLVTAALVLMAISFIFG 291 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 R++ ++ + + + + +P + ++ + ++ ++LL Sbjct: 292 PLRSVTLGQRVFTGVLVGFTFRIAQDLLGPSSL-VFGFSPLFAVLVPAGICAVAGVWLLR 350 Query: 354 I 354 Sbjct: 351 R 351 >gi|85713125|ref|ZP_01044158.1| Predicted permease [Idiomarina baltica OS145] gi|85693041|gb|EAQ31006.1| Predicted permease [Idiomarina baltica OS145] Length = 355 Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 129/357 (36%), Gaps = 5/357 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI + ++ LMS + + ++ +I+ ++++ V + + Y IP + Sbjct: 3 SILDRYIGATVLKTSLMSLIVLTGLSGLIRFVEQLKSVGRGSYEVIDAALFVFYSIPRDV 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + + + N+EL+++ G S++ + V+ A+++ I + + Sbjct: 63 EVFFPMAALLGGLIGMGVLASNSELIVMQAAGRSKLNIAGAVMKTAVVMMIAVIAIGEWV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SRD 180 P + + + A+ + + ++ + DD +I IS+ L G+ I D Sbjct: 123 APPMEAKGRLIRAQEISGGSLISAQRGVWAKDGDD-FINISEVEDTGRLNGVLIYDFDGQ 181 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 Q + YAQ+ ++ L+ R + + + + + Sbjct: 182 QQLETVTYAQTA--VYSNESWRLSQVVETRLTQQKVIEKRLDSTVWQSSLTPDKLGVVTI 239 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K ++S L++ + + Y +++ + + L+++ Sbjct: 240 KPESLSISGLID-YLTYLKSNEQSAQRYELALWRKVLSPVTVAVMLLVALSFIFGPLRET 298 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + +F V + ++ Q P + L L S +M +K Sbjct: 299 SMGARILLGVITGFAFHVSNEIFGPLAQVYQVPAVLGALLPSLVFASVAIFVMQRKS 355 >gi|332187143|ref|ZP_08388883.1| hypothetical protein SUS17_2304 [Sphingomonas sp. S17] gi|332012843|gb|EGI54908.1| hypothetical protein SUS17_2304 [Sphingomonas sp. S17] Length = 366 Score = 103 bits (256), Expect = 7e-20, Method: Composition-based stats. Identities = 64/364 (17%), Positives = 131/364 (35%), Gaps = 26/364 (7%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNI-------LLKISG 54 ++ +Y+ + +V + LQ ++++S S L + + Sbjct: 10 RTIAIYMAKMFLLRTFAILFALVIV------LQALDILSESGAILATPGNGEAQVWRYVS 63 Query: 55 YLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFL 114 P ++ + PF + T +MN+N+E++ + G S ++ P+L + +++ Sbjct: 64 LRAPQIIAFILPFSVLLGTILTFFTMNQNSEVIALKAAGLSAHQVLAPLLVASAGVAVLS 123 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTF-SYLEENLFFRLDDDL--YIKISKYNPNNTLQ 171 F + I P+ +T+ + S N++ R DDL + N L Sbjct: 124 FAFNDRIVPRATATLSAWQKVDYGPIPIDSGDRSNVWVRDGDDLISVDLVQGRGANTQLG 183 Query: 172 GIFIVDSRDTQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT 230 G+ + D + + I A G D I G R S ++ + Sbjct: 184 GVTLYDRKGGGSLQAIVRAPRGRRMGDGWQI----GPATRFEVASGKLTSIPSMIIGRGV 239 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 + + A+ + L N ++ +T +L+ + ++ L+ Sbjct: 240 TPEQLTLASVNADGLSFKGLSN-AIDDLREAGRPTKTLEGSLWHKLSAPMSAILMPLLGA 298 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP----YYIPILYLFLFCI 346 VAA A + I ++L +F V FS + + P + PIL FL Sbjct: 299 VAAFGIARSGKLFVRAVIGMALGFAFFVADNFSMAMGDLGAYPPFLAAWAPILLFFLIGE 358 Query: 347 SSIF 350 + +F Sbjct: 359 AVLF 362 >gi|218710647|ref|YP_002418268.1| hypothetical protein VS_2727 [Vibrio splendidus LGP32] gi|218323666|emb|CAV19977.1| hypothetical permease [Vibrio splendidus LGP32] Length = 356 Score = 103 bits (256), Expect = 7e-20, Method: Composition-based stats. Identities = 57/359 (15%), Positives = 131/359 (36%), Gaps = 10/359 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +LYI R I + + + V ++ +I+ ++++ V T L L IP + Sbjct: 3 KILDLYIGRTIIATTSLVLVTFVGLSGIIKYVEQLRKVGRGTYDLLQALYFVLLSIPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++ + VL AI L + + + Sbjct: 63 EMFFPMAALLGALIGLGMLAASSELVVMQAAGFSKLDIGLSVLKTAIPLMVIVTLLGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + L + + + ++ R +D +I I K + + + Sbjct: 123 APQAQKMARDLRTISVAGGSIISTQSGVWARDAND-FIFIVKIDDDKLYGLNMWRYDENK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDI--SIMKFKSYTLQTESANSSTIV 239 Y++ D + D EV + S+ F S+ + + Sbjct: 182 ALKTAIYSKEVDYVGD-NVWTMRDVEVTSFENEIQVTKESLPTF-SWETSLAPDKLAIVT 239 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADKRA 297 +K + +LS L + + + Y +++TQ + + L++ + R+ Sbjct: 240 VKPEELSLSGLYD-YVSYLKASEQDAARYELALWRKITQPISIAVMMLMALSFIFGPLRS 298 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + + + + F + F I + Q P + + +L+ +K Sbjct: 299 VTMGARILSGVIAGFT--FYISSEFFGPISLVYQIPPAFGAIAPSVVFFGIAIMLLRRK 355 >gi|258648441|ref|ZP_05735910.1| putative membrane protein [Prevotella tannerae ATCC 51259] gi|260851193|gb|EEX71062.1| putative membrane protein [Prevotella tannerae ATCC 51259] Length = 428 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 54/364 (14%), Positives = 128/364 (35%), Gaps = 9/364 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNIL-LKISGYLIPT 59 + + YI+ +++ I+ IA + ++I+ + S + IP Sbjct: 67 LTRLDRYIIYKFLSTYIFLIGIIISIAIIFDYNEKIDKFEKAHVSWTKIAFDYYLNFIPY 126 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + +TG S L++P + A ++++ F Sbjct: 127 FSNLFSPLFVFIAVIFFTSKLADNSEIIAMKSTGMSFRRLLRPYMISAAIIALTSFGLGA 186 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDS 178 + PK + L EN+ ++D + + IS+++ + G + Sbjct: 187 YVIPKGNVARVNFENRYIKKLNAPTSVENVQMQVDTGVVVYISRFDNETKSGYGFSLDKF 246 Query: 179 RDTQTHKIYYAQS---GSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + AQS ++ + L + + + + IS + E + Sbjct: 247 YGKKLIDHLTAQSIQYDTLAGKKNQWTLRQVQQRKMRGLRERISYADKVDTIIMMEPQDF 306 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + + + L + + E+HKR I LI + Sbjct: 307 FYVRNQQETMTVPELRQFIDKQQMRGAAGVSLFEVEYHKRFAMPFAAFILTLIGVS---L 363 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + R+ I + +++SF + F I N + P+L +++ + + + Sbjct: 364 SSQKRKNGMGTSIGVGIALSFS-YILFQTISSSFAVNANWSPMLSVWIPNLLFVLIAFGL 422 Query: 356 KKYT 359 K T Sbjct: 423 YKRT 426 >gi|315185938|gb|EFU19702.1| permease YjgP/YjgQ family protein [Spirochaeta thermophila DSM 6578] Length = 361 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 41/356 (11%), Positives = 108/356 (30%), Gaps = 5/356 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + L F + + V I +I + + + + +L + +P Sbjct: 1 MRIITRFALSWFLPLFFAALVSFVTILELIDLFTNLVAYIDADLTTFQILHLQLLYLPKC 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P L S++ + EL+ + G S + P + +L S F E + Sbjct: 61 VTYSLPIATLFAVAFSLGSLHASNELIALFGAGISLYRFVLPFVVCGLLFSGAYFFIEEL 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSR 179 + + ++L A + + + ++ L + +Y+ + T+ + + + Sbjct: 121 LAIPSLTQKQELMAILMGRTSPTQVVNVTLVGEENRLVVHTRRYDDRSRTITRVLVYEKD 180 Query: 180 DTQ-THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + A+ G+ D +++ +L + + ++ F+ Sbjct: 181 EEGAFASRIEAERGTWDPEQREWVLQRVRRYIRDEE-GNLKEESFEKLRTDLGEIQPEDF 239 Query: 239 --VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + D+ ++++KR++ I L++ A + Sbjct: 240 LQTRHSIDKMTLAEAGRWIQTLKRAGLPYREALTDYYKRISFAFTSFIVALLASSVAGRF 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 + + + P L + +F SI Sbjct: 300 KANALLLSLLLSLSIGVSYYVFQMVTTLFAKLGYLPPVVGAWLPVLVFFSGSILFF 355 >gi|78049236|ref|YP_365411.1| YjgP/YjgQ family permease [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325925501|ref|ZP_08186892.1| putative permease [Xanthomonas perforans 91-118] gi|78037666|emb|CAJ25411.1| putative YjgP/YjgQ family permease [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325544093|gb|EGD15485.1| putative permease [Xanthomonas perforans 91-118] Length = 360 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 53/358 (14%), Positives = 124/358 (34%), Gaps = 19/358 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L +SFL + + ++ ++ ++ + ++ +LL G Sbjct: 1 MPKLDRYLLSDFTQSFLATLIVLLVVSVGGVLVDILGNIADGRIPARLLLSQVGLQFVAY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP++ P + L + R++E+ +I G +++P+L L + + + + + Sbjct: 61 LPIILPLALMLGLLLALARLYRDSEMAVITAIGVGPRRMLRPMLMLVVPVVVVIGLCSLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSR 179 + P T + + A ++ + LE F L + + + + L +F+ + Sbjct: 121 LGPWASRTAEAMLEDANRSVLMAGLESGQFTPLSGGGVVYLQTISADGKGLGKVFMQ-RQ 179 Query: 180 DTQTHKIYYAQSGSI---DLDRQAIILNDGEVHRK--SPISKDISIMKFKSYTLQTESAN 234 + A G++ + + L+DG S + D +MKF S + Sbjct: 180 QNDRIDVVTADRGAMFFEGKTDRYLRLDDGYRTEGPASGATLDYRLMKFASSDIALPDRT 239 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + LL+ + R++ H+RL L + Sbjct: 240 RVHDANDPEVMWTTQLLS----------DERPAARAQLHERLAPPLL--ALAFALLTLPL 287 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 R+ RQ++ + L+ G L+ + ++ + Sbjct: 288 SRSAPRQQRYGRIMLAFLAYMVGTNLMIVGTQWIANGKTPAALGLWWLTLPLLAVAVW 345 >gi|254498610|ref|ZP_05111329.1| permease [Legionella drancourtii LLAP12] gi|254352150|gb|EET10966.1| permease [Legionella drancourtii LLAP12] Length = 354 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 47/358 (13%), Positives = 119/358 (33%), Gaps = 5/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + YI + + S + L +V + + + ++ + + +P Sbjct: 1 MRILDRYIAKTVLTSIGLVTLMLVGLQILFYLFDQLGDLGKLDYGITQAAFFVLMQMPYQ 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + L +M ++EL+++ +G S + + VL ++LL + + Sbjct: 61 VYLFFPMASLLGCLIGLGAMANHSELVVMRASGMSILQITGAVLKASVLLIFLVTVLGET 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P A ++ + F+ + +I + + PNN LQ I R Sbjct: 121 VVPYLSHYANDYKT-ASVSGGQTIRTAKGFWLRHGNDFISVGRILPNNVLQN--IYQFRF 177 Query: 181 TQTHKIYYAQSGS-IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + H + A+ Q + + + + + + + Sbjct: 178 DEQHHLKLARLIREAKYSEQGWVAYNVQQTEFVVDHTRAQTFATLPWDVPVKPKILNISS 237 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 ++ ++ L L N + + Y+ F +R+ Q ++ +++I Sbjct: 238 IEPDEMTLHEL-NRYIREQKRSHQNVHNYQFAFLQRIIQPFTTMVMMVLAIPFIFGPLRS 296 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ F + F + + Q P + L LM + + Sbjct: 297 STMGSKLLVGAAVGFGFHILSRFFGPVSSVFQLPAGLAALGPTFLFALLGLYLMRRVR 354 >gi|221133511|ref|ZP_03559816.1| predicted permease [Glaciecola sp. HTCC2999] Length = 354 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 47/356 (13%), Positives = 121/356 (33%), Gaps = 8/356 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 ++YI R + + ++ +V ++ +I+ ++++ V L + + +P + Sbjct: 3 SIIDIYIARTLLSTIFVTLSTLVGLSALIKFVEQLRKVGEGDYDLIVAGLFVFFSLPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + + + N+EL+++ +G S+ +I+ + A+++ + + + Sbjct: 63 EQFFPMATLLGGLIGMGVLASNSELIVMQASGMSKWNIIQSAMKCAVVMVCIILLVGEFL 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SRD 180 P + KQ+ +A + ++ + D ++ I L + I + D Sbjct: 123 TPVSEAKAKQIRTEALSGGQVFTSNKIVWTKDGSD-FVSIGNVFNQENLGDVTIYKFNDD 181 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 +I A+ + + + L D + + + + + S + Sbjct: 182 LDLTQIIAAKRATFVEE--SWALQDVHITYINDQRISTNRISLTEWRAALTPDKLSVATV 239 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADKRAL 298 K ++ L + Y +++ Q + + L++ V R+ Sbjct: 240 KPEALSIQGLYE-YVGYLQNNQQDSTRYELAMWRKILQPVSVCVMLLMAFSFVFGSLRST 298 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + I S F F P I+ LF ++ LL Sbjct: 299 TMGSRIIVGTLTGFSF-FIANEVFGPFAMVYNLPPMLGAIVPSALFAGVAVLLLRR 353 >gi|118474326|ref|YP_891923.1| YjgP/YjgQ permease [Campylobacter fetus subsp. fetus 82-40] gi|118413552|gb|ABK81972.1| putative permease, YjgP/YjgQ family [Campylobacter fetus subsp. fetus 82-40] Length = 341 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 57/356 (16%), Positives = 133/356 (37%), Gaps = 28/356 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+ +F + I ++ +Q + S S + LLK+ +++P + Sbjct: 1 MNKVNKYLFASFLSTFASLFATLFLIMSIVFFIQIARITSYIEISFSELLKLYLFMLPQI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P F + +++ E +++ G + +F++ ++S+ + I+ I Sbjct: 61 LLFTIPIGFFVSVAMSFFRLSKENESIVMFTLGQDPKNISNFFIFISFIVSVVMLINSLI 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN---TLQGIFIVD 177 + P + + + + ++ + F + + I K N NN + I + D Sbjct: 121 VMPIAQ-NLNDNFIEYKKTKLSLNIKPSEFGQKFGSWMVFIEKQNDNNDSLKYENIVMYD 179 Query: 178 SRDTQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 D +QSG I +IL G+++ +IS +++ ++T ++ Sbjct: 180 VSDENERL-ITSQSGDIKNQNSNLELILKKGKMYDIRDNKWNIS--SYENMVIRTLIKDN 236 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + L ++ + + T + LFP+ + ++ Sbjct: 237 KNETYSLKEYWLKAF----SDDKRAKDLSIYTLVA---------LFPLASVMFALSF--- 280 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + + +K F + F F++I+ Q Y IPI+++ F S++ Sbjct: 281 GIVTYRYEKGIIYFGIFGVLFAY---FAFIMLFARQPIYAIPIIFIVSFVFSALTF 333 >gi|83644757|ref|YP_433192.1| permease [Hahella chejuensis KCTC 2396] gi|83632800|gb|ABC28767.1| predicted Permease [Hahella chejuensis KCTC 2396] Length = 353 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 47/358 (13%), Positives = 122/358 (34%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + YI+ + + L+ L ++ + V + ++ + + ++L +K + +P Sbjct: 1 MRRIDRYIVATVASAMLLVLLVVLSLDLVFAFIAEMDELKNDYQTLQA-MKYIIFTVPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L + N+EL +I G S + ++ + A+ + + + Sbjct: 60 IYDYLPLAAFIGCLVGLGVLANNSELTVIRAAGVSVVRVVWSTMKPALAVVVVGILVGEF 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ + A Q A ++ R + ++++ + P L G+ + + D Sbjct: 120 VAPQTERIAQTQKALEQGAAENVASSAGMWRR-EGNVFMHFNAVEPKGVLHGVSLFEFND 178 Query: 181 TQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + +A+ D +L D E + + + + ++ Sbjct: 179 ERRMVRSTFAKRAIYQGDH--WLLQDIERTEIKDDGSHVQTFDSLRWNVSLSPSILEVLI 236 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 +K ++ L N + +Y F K++ Q + + L++I Sbjct: 237 IKPEYLSIKGLYT-YANYQEEQGLDANSYLMAFWKKVLQPVATSVLVLVAISFIFGPLRS 295 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I + + F + I L C +L+ + + Sbjct: 296 VTMGFRVFCGIIIGLLFKYMQDLLGPASLVFGFNPVIATLAPICICALLGVVLLRRVR 353 >gi|262401790|ref|ZP_06078355.1| putative membrane protein [Vibrio sp. RC586] gi|262351762|gb|EEZ00893.1| putative membrane protein [Vibrio sp. RC586] Length = 356 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 56/359 (15%), Positives = 137/359 (38%), Gaps = 10/359 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I + + + V ++ +I+ ++++ V + L L IP + Sbjct: 3 KILDWYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGEGSYDLLQALLFVVLSIPRDV 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L ++ ++EL+++ G S++ + VL AI L I + + Sbjct: 63 EMFFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIIITLLGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + + A A + ++ R +D +I I+K + + Sbjct: 123 APQAQKLARDMRAFATSGGAIMSVRTGVWARDAND-FIFIAKVDNEQLTGMNLWRFDENK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--STIV 239 + + +A+ + + ++ D ++ R +IS Y +T A + + Sbjct: 182 KLSTVIFAERVDYVGNNE-WLMKDAQLTRLVSDI-EISKESLPEYRWRTSLAPDKLAVVT 239 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADKRA 297 +K + +LS L + + + Y +++TQ + + L++ + R+ Sbjct: 240 VKPEELSLSGLSD-YVHYLKASEQDSSRYELALWRKVTQPISIAVMMLMALSFIFGPLRS 298 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + + + + F + F + + P + L ++ L+ +K Sbjct: 299 VTMGARILSGVIAGFT--FYISSEFFGPLSLVYGLPPLFGAVAPSLVFLTIALGLLGRK 355 >gi|91788271|ref|YP_549223.1| permease YjgP/YjgQ [Polaromonas sp. JS666] gi|91697496|gb|ABE44325.1| permease YjgP/YjgQ [Polaromonas sp. JS666] Length = 381 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 55/387 (14%), Positives = 131/387 (33%), Gaps = 36/387 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVS-SSTESLNI-------LLKI 52 M++ I + + + L + + + ++ + + ++ S L Sbjct: 1 MRTIRRLIYGEVLTAIALVALGFLALFFFFDLVDELQYLGKNNGLSAAADIYQIRHALLY 60 Query: 53 SGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSI 112 LIP L + P + T V+ + +++E I+ +G ++ +L L Sbjct: 61 VALLIPNHLYELLPISVLIGTIFVMARLAQSSEYTILRTSGLGPWRALRLLLVLGAAFVT 120 Query: 113 FLFISENIIEPKCRSTIKQLSAKAQLALTF----SYLEENLFFRLDDDLYIKISKYNPNN 168 F + + P + L A+ Q +T ++L+E + + + + + PNN Sbjct: 121 LSFAVGDYVAPTSERAAQLLKARYQSKITVGQTGAWLKEK---QPYNSYVVNVKELTPNN 177 Query: 169 TLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKS-----------PISKD 217 ++G+ I + + + A +L Sbjct: 178 EMKGVQIFEFDNKGLIVSTTQAPVAQFTGGDAWMLKQASRAEFDVPASPADISKPQNGAR 237 Query: 218 ISIMKFKSYT--LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKR 275 +S +++ + + S +LK + L N + N + + Y EF K+ Sbjct: 238 VSRTTLQTFRWPTEISAEMVSVALLKPERMSTLDLFN-YVRHLNANGQTAQRYEIEFWKK 296 Query: 276 LTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQN 332 + L ++ ++++ A R +F + I F F YI + Sbjct: 297 VFYPLSCLVMVMLALPFA--YLHFRSGGIASYVFAGVMIGISFFLLNNVFGYIGNLRNWQ 354 Query: 333 PYYIPILYLFLFCISSI--FLLMIKKK 357 P+ ++ S+ F ++ ++ Sbjct: 355 PWLAAATPGLMYMAVSLGAFGWLVLRR 381 >gi|90580730|ref|ZP_01236533.1| putative permease [Vibrio angustum S14] gi|90437998|gb|EAS63186.1| putative permease [Vibrio angustum S14] Length = 357 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 48/357 (13%), Positives = 131/357 (36%), Gaps = 5/357 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I +F ++ +V ++ +I+ ++++ V + L L +P + Sbjct: 3 KILDWYIGRTIIATFSLTLSTLVGLSAIIKYVEQLRKVGQGSYDLLKALYFVLLSMPQDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++ + L A+ + I + + Sbjct: 63 IMFFPMAVLLGALIGLGMLASSSELVVMQAAGFSKLDIGLSTLKTAVPMMIVVVLLGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + ++ + + + ++ + D+ +I + + + N + + I + Sbjct: 123 APQAQKMAREYRSAWVYGGSVIAAQNGVWAKN-DNSFIYMGRVHDLNKVDVVNIWQFDNK 181 Query: 182 QT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-DISIMKFKSYTLQTESANSSTIV 239 + A+ S D + ++D + + ++ S + K + + + Sbjct: 182 GQLDDVTSAKRASYDKAK-GWTMHDVTITDMTGSNQLTNSHIANKHWETTLTPDKLAVVT 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 +K + +LS L + N + Y F ++ Q + + L+++ Sbjct: 241 VKPEELSLSGLYH-YVNYLKETKQDASRYELAFWRKALQPVSIAVMMLLALSFVFGPLRS 299 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + +F + + + + P + L L + L+ +K Sbjct: 300 VTMGARVLSGVIFGFAFYISDQVFGPMILVYRLPPILGALGPSLAFLFITIYLLRRK 356 >gi|320101899|ref|YP_004177490.1| permease YjgP/YjgQ family protein [Isosphaera pallida ATCC 43644] gi|319749181|gb|ADV60941.1| permease YjgP/YjgQ family protein [Isosphaera pallida ATCC 43644] Length = 507 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 89/218 (40%), Gaps = 13/218 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + Y++R + SF ++ L I I + ++ + + L+ +++I+ YLIP Sbjct: 4 IGILQRYVIRQLLGSFALALLAISSIIVLFLVMA---EAAKAGLGLDQIVQIAPYLIPGT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP P T V + + E+ + G S T++ P + L+I+LS L+++ + Sbjct: 61 LPYTVPVALLFSVTVVYGRLAGDNEITAVKAAGLSVWTVLWPCILLSIVLSGALYLAASH 120 Query: 121 IEPKCRSTIKQLSA-KAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV--- 176 + P+ +K++ + T + + + I + ++ + +F Sbjct: 121 VIPEANHAVKRVIFSNYEQTFTTFLRRDRILNNPNWPFVIIVKDMEGDDLIAPVFKRRAK 180 Query: 177 -DSRDTQTHKIYYAQSGSIDLDRQ----AIILNDGEVH 209 + RD A+ + D + + L D + Sbjct: 181 INGRD-GFDLNIVAKRARLSFDMERAMVRVFLVDATIQ 217 >gi|15602062|ref|NP_245134.1| hypothetical protein PM0197 [Pasteurella multocida subsp. multocida str. Pm70] gi|12720420|gb|AAK02281.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] Length = 356 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 49/365 (13%), Positives = 135/365 (36%), Gaps = 20/365 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + + Y+ + I + + + +V ++ +I+ +++ V T + + + IP Sbjct: 2 MSTLDRYLGKSILGAIFATLIMLVGLSGIIKFVEQFRSVGKGTYDIWQAILYTVLTIPKD 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ +EL+++ +G SR+ + V+ A+ L I + Sbjct: 62 IETFFPMAALLGALIALGNLASRSELVVMQASGFSRLKIGFAVMKTALPLVILTMLIGEW 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-DSR 179 P+ + + +KA + ++ ++ + D + +I I + + L ++I + Sbjct: 122 GIPQTEQFARDMRSKAISGGSLLSVKNGIWAK-DGNEFIYIKRITDDIALSDVYIYRFAE 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKF-----KSYTLQTESAN 234 + Q ++ +A + + + + HR + + + + + Sbjct: 181 NRQLQQVKHANTATYQEGKWIL-------HRLTESAISENEITTVNRVNAEWQTNLTPDK 233 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 L+ ++S L N + + + + ++L Q L + ++++ Sbjct: 234 LGIASLRPTSLSISGLSN-YITFLRETGQESKKFELTYWRKLFQPLSVGVMMMLALSFIF 292 Query: 295 KRALVRQRKKIHPIFISLSISFGVFW---GFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 +R I + F + F + P ++ LF + + +L Sbjct: 293 GP--LRSVTAGARIVTGICFGFLFYVVNEIFGPLSLVYNVTPLAGALMPSVLFLLITWWL 350 Query: 352 LMIKK 356 L K+ Sbjct: 351 LSRKR 355 >gi|301346207|ref|ZP_07226948.1| permease YjgP/YjgQ family protein [Acinetobacter baumannii AB056] Length = 201 Score = 102 bits (255), Expect = 8e-20, Method: Composition-based stats. Identities = 27/194 (13%), Positives = 75/194 (38%), Gaps = 4/194 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + + L+ + I ++++ + + +IL I GY +P L Sbjct: 2 IIRRYLVKQVVSTSLVVIALLTLIMMGGRLIKYFGVAAQGRLDASILFSIIGYRLPEFLT 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + V + + E+ +++ +G SR L + ++ + ++ + + + Sbjct: 62 LILPLGFFIGLMLVFGRLYVDHEMAVLNGSGVSRHQLARLLIPMTLVYMVCQSVLMLWMT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDS--R 179 P ++L+ + F + F I + + L+ IF + Sbjct: 122 PWGLREFEKLTTTQAVRTGFDLVRPREFISSGP-YTIYAGSLSEDRKNLKDIFFYQRAAK 180 Query: 180 DTQTHKIYYAQSGS 193 + + + A+ + Sbjct: 181 EGKPDVMILAKEAT 194 >gi|118580062|ref|YP_901312.1| permease YjgP/YjgQ family protein [Pelobacter propionicus DSM 2379] gi|118502772|gb|ABK99254.1| permease YjgP/YjgQ family protein [Pelobacter propionicus DSM 2379] Length = 359 Score = 102 bits (255), Expect = 8e-20, Method: Composition-based stats. Identities = 59/365 (16%), Positives = 140/365 (38%), Gaps = 14/365 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI R L+ + I V+ +++RI +L + + + +P + Sbjct: 1 MTIIDRYIAMTWLRLLLLCQGSFLSIYLVLDMMERIPRFLRVQGALVDIARFFAWKLPEM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + F M T L + R++E++ + + G S + P+L L +S+ L ++ + Sbjct: 61 IGQTAAFSVLMATLLTLGLLTRSSEIVAMRSCGISLPRISLPMLLLGGGVSLLLLVNAEL 120 Query: 121 IEPKCRSTIKQLSA-KAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDS 178 I P + ++ + + + N + D+ ++ ++P + L+G+ + Sbjct: 121 IVPDSYERMSRIERVDIKKQAGSAVFKRNNIWFRSDNRIMQARLFDPRSQVLRGVVVWSL 180 Query: 179 RDTQTHKIYY-AQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 A+S + ++ +L E+ + + + K + ++ Sbjct: 181 DQYTNPLSRLDAESAELR--GESWLLRGVELKEFTAGEGVV-VRKLPTRSIDLNLKVDDL 237 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLE-TYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 VL N NLSF + + + YR+ H + L ++ ++ I A + Sbjct: 238 RVLDKNADNLSFGKLREYADNLRKGGYEDFKYRTMMHTKFAAPLSALVMVILGIPFALRG 297 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF----LFCISSIFLL 352 R + S++I F F + ++ ++ P++ + LF + ++L Sbjct: 298 --SRSGGVAMGVGASVTIGFAYFVVNAVLLS-YGRSGVLPPLVAAWGANFLFILGGLWLT 354 Query: 353 MIKKK 357 M + Sbjct: 355 MSIRN 359 >gi|217322882|ref|YP_002327178.1| hypothetical protein ABBFA_003302 [Acinetobacter baumannii AB307-0294] gi|213986547|gb|ACJ56846.1| hypothetical protein ABBFA_003302 [Acinetobacter baumannii AB307-0294] Length = 294 Score = 102 bits (255), Expect = 8e-20, Method: Composition-based stats. Identities = 41/284 (14%), Positives = 100/284 (35%), Gaps = 16/284 (5%) Query: 74 TNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLS 133 V + + E+ +++ +G SR L + ++ + ++ + + + P ++L+ Sbjct: 1 MLVFGRLYVDHEMAVLNGSGVSRHQLARLLIPMTLVYMVCQSVLMLWMTPWGLREFEKLT 60 Query: 134 AKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDS--RDTQTHKIYYAQ 190 + F + F I + + L+ IF ++ + + A+ Sbjct: 61 TTQAVRTGFDLVRPREFISSGP-YTIYAGSLSEDRKNLKDIFFYQRAAKEGKPDVMILAK 119 Query: 191 SGS---IDLDRQAII-LNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 + + D ++ L G + P + +F+SY L+ E+ + Sbjct: 120 EATRVEVANDTANVVDLVQGRRYEIFPGQPKYTQAEFQSYRLRLENDKDVKFESGDVEAL 179 Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 + L N+P RSE RL +I ++S+ ++ + ++ Sbjct: 180 STSKLFSKANDPVV--------RSELGWRLFGPFTIIIALMLSVALSEVSPRQGRYYRLI 231 Query: 307 PIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 P + + I K E + + P+ L +++F Sbjct: 232 PSIFIFASLIVLMIAIKTRISKGELDIWAYPVALLVYAIAAALF 275 >gi|330962174|gb|EGH62434.1| hypothetical protein PMA4326_26817 [Pseudomonas syringae pv. maculicola str. ES4326] Length = 353 Score = 102 bits (255), Expect = 8e-20, Method: Composition-based stats. Identities = 54/362 (14%), Positives = 122/362 (33%), Gaps = 16/362 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLV--SSSTESLNILLKISGYLIP 58 M + YI + + + L I+ + + I+ + S T +L L P Sbjct: 1 MVKLDRYIGKSVLLAILAVLGIILGLV---SLFAFIDEMGDISDTYTLPDALSYVMMTAP 57 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + P + L S+ ++EL I+ G S ++ V+ +LL I + Sbjct: 58 RRVYDTLPMAALIGCLIGLGSLASSSELTIMRAAGVSIGRIVWAVMKPMLLLMIAGVLVG 117 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF---I 175 + P + + + AQ + L+ R ++ +I I+ PN + G+ Sbjct: 118 EYVAPYAENKAQAARSLAQGLGDAQSAKHGLWHRQGEE-FIHINTVQPNGLMLGVTRYRF 176 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 D R T +A+ D L D + ++ + + + Sbjct: 177 DDQRHMLTSS--FAKEAHFKTD--YWELKDVTTTHFNDGRTEVINTPDERWDVSLSPQLL 232 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 ST+++ ++S L + + + Y F ++ Q V L++I Sbjct: 233 STVIMPPESLSISGLWS-YAHYLADQGLSNGRYWLAFWTKVLQPAVTVALVLMAISFIFG 291 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 +R +F + + F + + + L + ++ +++ Sbjct: 292 P--LRSVTLGQRVFTGVVVGFTFRIIQDLLGPSSLLFGFPPLLAVLLPAGVCALAGVLLL 349 Query: 356 KK 357 ++ Sbjct: 350 RR 351 >gi|294625211|ref|ZP_06703852.1| YjgP/YjgQ family permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292600485|gb|EFF44581.1| YjgP/YjgQ family permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 360 Score = 102 bits (255), Expect = 8e-20, Method: Composition-based stats. Identities = 53/362 (14%), Positives = 124/362 (34%), Gaps = 19/362 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L +SFL + + ++ ++ ++ + ++ +LL G Sbjct: 1 MPKLDRYLLSDFTQSFLATLIVLLVVSVGGVLVDILGNIADGRIPARLLLSQVGLQFVAY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP++ P + L + R++E+ +I G +++P+L L + + + + + Sbjct: 61 LPIILPLALMLGLLLALARLYRDSEMAVITAIGVGPRRMLRPMLMLVVPVVVVIGLCSLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSR 179 + P T + A ++ + LE F L + + + + L +F+ + Sbjct: 121 LGPWASRTADAMLEDANRSVLMAGLESGQFTPLSGGGVVYLQTISADGKGLGKVFMQ-RQ 179 Query: 180 DTQTHKIYYAQSGSI---DLDRQAIILNDGEVHRK--SPISKDISIMKFKSYTLQTESAN 234 + A G++ + + L+DG S + D +MKF S + Sbjct: 180 QNDRIDVVTADRGAMFFEGKTDRYLRLDDGYRTEGPASGATLDYRLMKFASSDIALPDRT 239 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + LL+ + R++ H+RL L + Sbjct: 240 RVHDANDPEVMWTTQLLS----------DERPAARAQLHERLAPPLL--ALAFALLTLPL 287 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R+ RQ++ + L+ G L+ + ++ + Sbjct: 288 SRSAPRQQRYGRIMLAFLAYMVGTNLMIVGTQWIANGKTPAALGLWWLTLPLLAVAVWTY 347 Query: 355 KK 356 + Sbjct: 348 AR 349 >gi|261211061|ref|ZP_05925350.1| putative membrane protein [Vibrio sp. RC341] gi|260839562|gb|EEX66173.1| putative membrane protein [Vibrio sp. RC341] Length = 356 Score = 102 bits (255), Expect = 8e-20, Method: Composition-based stats. Identities = 52/358 (14%), Positives = 134/358 (37%), Gaps = 8/358 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I + + + V ++ +I+ ++++ V + L L IP + Sbjct: 3 KILDWYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGEGSYDLLQALLFVVLSIPRDV 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L ++ ++EL+++ G S++ + VL AI L I + + Sbjct: 63 EMFFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIIITLLGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + + A A + ++ R +D +I I+K + + + Sbjct: 123 APQAQKLARDMRAFATSGGAIMSVRTGVWARDAND-FIFIAKVDNEQLIGMNLWRFDENK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHR-KSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + +A+ + + ++ D + R + I + + + + + Sbjct: 182 KLSTVIFAEEVDYIGNNE-WLMKDVHLTRMVNDIEISKEALPEYRWHTSLAPDKLAVVTV 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADKRAL 298 K + +LS L + + + Y +++TQ + + L++ + R++ Sbjct: 241 KPEELSLSGLSD-YVHYLKASEQDASRYELALWRKVTQPISIAVMMLMALSFIFGPLRSV 299 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + + + F + F + + P + L ++ L+ +K Sbjct: 300 TMGARILSGVIAGFT--FYISSEFFGPLSLVYGLPPLFGAIAPSLVFLTIALGLLGRK 355 >gi|257095655|ref|YP_003169296.1| permease YjgP/YjgQ family protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257048179|gb|ACV37367.1| permease YjgP/YjgQ family protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 357 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 59/368 (16%), Positives = 133/368 (36%), Gaps = 22/368 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y+ R + + L+ L + + +L I V L+ IP Sbjct: 1 MKLYRRYVGREVMGAVLLVLLGFLALFAFFDMLGEIRNVGQGGYQLHHAFAFVLLRIPGR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + T L+++ R++E+ ++ +G S L+ + +A +L++ F+ Sbjct: 61 VYELMPIAVLIGTLYALSTLARHSEITVLRVSGLSSGGLLTVLFQVAGVLAVLTFLIGEY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI--VDS 178 + P QL +K + + L L+ + D+ +I + P+ L+GI I D Sbjct: 121 VAPPSERAAFQLRSKERTGMVGQDLRSGLWVK-DERSFINVRIVLPDTRLRGIRIFEFDE 179 Query: 179 RDTQTHKIYYAQSGSIDLDRQAI------ILNDGEVH-RKSPISKDISIMKFKSYTLQTE 231 A+ + D + +L G R P + S + Sbjct: 180 DAKLRSMTEAAEGEYVVPDSWRLTNVVQTVLEGGRAEVRSVPDMQWRSALN--------- 230 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 + ++L + D+ L+ + + Y F K++ L ++ +++ Sbjct: 231 -PDILAVLLVSPDRMSLRHLSAYTKHLADNHQTTNRYDIAFWKKVIYPLAGLVMVALALP 289 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-NPYYIPILYLFLFCISSIF 350 + V + + + F + G + I +P LF +++ Sbjct: 290 FGGAHSRVEGVGLKIFVGVMIGTLFHMLNGLFSNLGAINHWSPLLSAATPSILFLLAATA 349 Query: 351 L-LMIKKK 357 + ++K+ Sbjct: 350 MIWWVEKR 357 >gi|166713424|ref|ZP_02244631.1| hypothetical protein Xoryp_18795 [Xanthomonas oryzae pv. oryzicola BLS256] Length = 360 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 52/358 (14%), Positives = 122/358 (34%), Gaps = 19/358 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L +SFL + + ++ ++ ++ + ++ +LL G Sbjct: 1 MPKLDRYLLSDFTQSFLATLIVLLVVSVGGVLVDILGNIADGRIPARLLLSQVGLQFVAY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP++ P + L + R++E+ +I G +++P+L L + + + + + Sbjct: 61 LPIILPLALMLGLLLALARLYRDSEMAVITAIGVGPTRMLRPLLMLVVPVVVIIGLCSLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSR 179 + P T + + A ++ + LE F L + + + + L +F+ + Sbjct: 121 LGPWASRTAEAMLEDANRSVLMAGLESGQFTPLSGGGVVYMQTISADGKGLGKVFMQ-RQ 179 Query: 180 DTQTHKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISK--DISIMKFKSYTLQTESAN 234 + A G++ + + L+DG D +MKF S + Sbjct: 180 QNDRIDVVTADRGALFFEGKTDRYLRLDDGYRTEGPAGGATLDYRLMKFASSDIALPDRT 239 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + LL+ + R++ H+RL L + Sbjct: 240 RLHDGNDPEVMWTTQLLS----------DERPAARAQLHERLAPPLL--ALAFALLTLPL 287 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 R+ RQ++ + L+ G L+ + ++ + Sbjct: 288 SRSAPRQQRYGRIMLAFLAYMVGTNLMIVGTQWIANGKTPAALGLWWLTLPLLAVAVW 345 >gi|294664573|ref|ZP_06729915.1| YjgP/YjgQ family permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292605657|gb|EFF48966.1| YjgP/YjgQ family permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 360 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 53/358 (14%), Positives = 124/358 (34%), Gaps = 19/358 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L +SFL + + ++ ++ ++ + ++ +LL G Sbjct: 1 MPKLDRYLLSDFTQSFLATLIVLLVVSVGGVLVDILGNIADGRIPARLLLSQVGLQFVAY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP++ P + L + R++E+ +I G +++P+L L + + + + + Sbjct: 61 LPIILPLALMLGLLLALARLYRDSEMAVITAIGVGPRRMLRPMLMLVVPVVVVIGLCSLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSR 179 + P T + + A ++ + LE F L + + + + L +F+ + Sbjct: 121 LGPWASRTAEAMLEDANRSVLMAGLESGQFTPLSGGGVVYLQTISADGKGLGKVFMQ-RQ 179 Query: 180 DTQTHKIYYAQSGSI---DLDRQAIILNDGEVHRK--SPISKDISIMKFKSYTLQTESAN 234 + A G++ + + L+DG S + D +MKF S + Sbjct: 180 QNDRIDVVTADRGAMFFEGKTDRYLRLDDGYRTEGPASGATLDYRLMKFASSDIALPDRT 239 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + LL+ + R++ H+RL L + Sbjct: 240 RVHDANDPEVMWTTQLLS----------DERPAARAQLHERLAPPLL--ALAFALLTLPL 287 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 R+ RQ++ + L+ G L+ + ++ + Sbjct: 288 SRSAPRQQRYGRIMLAFLAYMVGTNLMIVGTQWIANGKTPAALGLWWLTLPLLAVAVW 345 >gi|94500484|ref|ZP_01307015.1| hypothetical protein RED65_15478 [Oceanobacter sp. RED65] gi|94427274|gb|EAT12253.1| hypothetical protein RED65_15478 [Oceanobacter sp. RED65] Length = 354 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 50/360 (13%), Positives = 118/360 (32%), Gaps = 12/360 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + YI + S L + + VI +L +++ + T + L PT Sbjct: 1 MRKIDAYIRSSVINSILAVLFVLGMLDLVIALLNQLDNL-RDTFTFADALYYVVASAPTR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L S+ ++EL I G S ++ + + ++ + + Sbjct: 60 LYEMIPMITLIGCLVGLGSLATHSELTAIRAAGVSTGRIMLSTIKASAIMMVLSLVMGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P A E + + + Y++ + PN L G+ + + D Sbjct: 120 IVPDLERMTTSFRTIALGREVAVTNEGKGHWHKEGNNYMRFAAIEPNGVLHGMTLYEF-D 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + R+ + + + + + + + + Sbjct: 179 ENKNLTKMTHAKRAIYQREHWSMENVRITHIEDVRTEYKAKSIAPFDTELTPETLKFVAQ 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADKRAL 298 + D +S L + + ++ F K+L Q + + L+ + R++ Sbjct: 239 EPKDMAISTLYKYG-QYLDAQGLGGGEFKLAFWKKLLQPISTLALVLVGISFIFGPLRSV 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY-LFLFCISSIF-LLMIKK 356 ++ I + L V ++ I P+L L + I+ M+++ Sbjct: 298 TMGQRLFTGILVGLVYKIVVD-----LLGPIGLLVGIGPLLANLIPIGLCMIWGSWMLRR 352 >gi|302188385|ref|ZP_07265058.1| permease YjgP/YjgQ [Pseudomonas syringae pv. syringae 642] Length = 353 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 46/322 (14%), Positives = 110/322 (34%), Gaps = 12/322 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLV--SSSTESLNILLKISGYLIP 58 M + YI + + + L I+ + + I+ + S T +L L P Sbjct: 1 MVKLDRYIGKSVLLAILAVLGIILGLV---SLFAFIDEMGDISDTYTLADALSYVMLTAP 57 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + P + L ++ ++EL I+ G S ++ V+ ++L I + Sbjct: 58 RRVYDTLPMAALIGCLIGLGTLASSSELTIMRAAGVSIGRIVWAVMKPMLVLMIAGVLVG 117 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 + P + + + AQ + L+ D +I I+ PN + G+ Sbjct: 118 EYVAPYAENQAQAARSLAQGSGDAQSARHGLW-HRQGDEFIHINTVQPNGLMLGVTRYRF 176 Query: 179 RDTQTHKI-YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + +A+ + D L D + S ++ + + + ST Sbjct: 177 DEQRHMLTSSFAKEANFKTD--YWELKDVATTHFNDGSTEVVNTPVERWDVALSPQLLST 234 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQW--LFPVIFGLISIVAADK 295 +++ ++S L + + + Y F ++ Q ++ IS + Sbjct: 235 VIMPPESLSISGLWS-YAHYLADQGLSNGRYWLAFWTKVLQPAVTVALVLMAISFIFGPL 293 Query: 296 RALVRQRKKIHPIFISLSISFG 317 R++ ++ + + + Sbjct: 294 RSVTLGQRVFTGVVVGFTFRII 315 >gi|269121332|ref|YP_003309509.1| permease YjgP/YjgQ family protein [Sebaldella termitidis ATCC 33386] gi|268615210|gb|ACZ09578.1| permease YjgP/YjgQ family protein [Sebaldella termitidis ATCC 33386] Length = 360 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 59/359 (16%), Positives = 132/359 (36%), Gaps = 15/359 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YIL + F++ L + I + + + + +L + Y +P + Sbjct: 1 MNKLDRYILINYIKGFILGMLMFLLIFLLAESINVTGWIMEDKFTLKDSMVYIKYGLPEI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + + ++ M + E+ + G S + + + L+S+F Sbjct: 61 LVNTAPLGILLGSLLSISKMAQRLEITAVKTAGISFRRFVLFPILFSALVSVFTVYISIN 120 Query: 121 IEPKCRSTIKQLSAK--AQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVD 177 I P+ +++ + + T +++++ +LD + + S N N N ++GI IVD Sbjct: 121 ILPEANKMKREMKDRKLKEDDQTKKNEKKDVYIKLDKNRMLYASYVNKNKNLMEGIMIVD 180 Query: 178 SRD--TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + IY + S + + + + G + + + + L+ Sbjct: 181 FHENLNGIKSIYVSPSATYNSQSKIW--DFGSLKELDVEKNMENEILSSEFQLRATPNEI 238 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 +KA + L L + + + SE + RL+ I I + Sbjct: 239 LEDQVKAKELTLKELREKSVYYSRVGANTNDLF-SELYNRLSFTFASFIMSFIGLSLG-- 295 Query: 296 RALVRQRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + + I I LS+ G ++G S ++ + P LY+ + + +F + Sbjct: 296 ---SKYVRGGAAINIGLSVLIGYSYYGISTMLRSMGPVVSVFP-LYITAWLTNIVFFAL 350 >gi|222054622|ref|YP_002536984.1| permease YjgP/YjgQ family protein [Geobacter sp. FRC-32] gi|221563911|gb|ACM19883.1| permease YjgP/YjgQ family protein [Geobacter sp. FRC-32] Length = 357 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 55/357 (15%), Positives = 124/357 (34%), Gaps = 13/357 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK F ++ R + + I V+ L++I + + + L ++ IP V Sbjct: 1 MKIFNRFVAAAYARILCLCLGTFIAIFLVVDFLEKIGRFAGANPAYIALFFLT--RIPEV 58 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + M T L + ++EL + G S + P+L +A +SI Sbjct: 59 ICQTSAMAVLMATLLTLGMFSMSSELTAMRGCGLSLGRIAMPILVIAFSVSILNLAINEY 118 Query: 121 IEPKCRST-IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDS 178 + P+C + + + + DD+ +K + ++P + L+GI + Sbjct: 119 VLPRCIVQGQYIREVLIEKKSPNLFFRQMNIWHRDDNFILKANLFDPASGQLKGITVW-R 177 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPIS-KDISIMKFKSYTLQTESANSST 237 + + LD +L D S + S + L + + Sbjct: 178 MGAGMQPEQRLDAATAKLDAGGWLLTDVVAREFSESNIIKTSEVASMPVPLNLRATDLKV 237 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + +++ + L Y ++ H R++ P++ + + A + + Sbjct: 238 MRKFSDNMGIRELAAYCEK-LRKGGYDPTRYLAQMHGRISLAFAPLVMAFLGVPFAVRGS 296 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + I + +S S G+ +GF + + + + ++ LMI Sbjct: 297 ------RSSGIALGISASLGIGFGFFVLNSIVLSFGQAGVLSPVISAWSTNGIFLMI 347 >gi|308189157|ref|YP_003933288.1| hypothetical protein Pvag_3723 [Pantoea vagans C9-1] gi|308059667|gb|ADO11839.1| Uncharacterized protein [Pantoea vagans C9-1] Length = 204 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 25/183 (13%), Positives = 68/183 (37%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGEVPTNLVLTLLGLGVPQMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + L + S+ ++ + Sbjct: 62 LILPLSLFLAILMTLGRLYTESEITVMHACGLSKAVLVKAAMVLMLFTSVVAAVNVIWLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +++ A+ + + F D + + N +F+ R Sbjct: 122 PWSSRYQDEVTQNAKANPGAAAMAAGQFQTSSDGSAVLFVEDVKGNNFGNVFLAQLRPKG 181 Query: 183 THK 185 + Sbjct: 182 NAR 184 >gi|288940379|ref|YP_003442619.1| permease YjgP/YjgQ family protein [Allochromatium vinosum DSM 180] gi|288895751|gb|ADC61587.1| permease YjgP/YjgQ family protein [Allochromatium vinosum DSM 180] Length = 354 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 47/357 (13%), Positives = 119/357 (33%), Gaps = 8/357 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + Y+ + L++ ++ + V + ++ + + L + + +P Sbjct: 1 MRILDRYLAWAVMSGTLLTLAGLLPLMGVFILSDELDAIGTERYGLAEAMLFTLLSLPRY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L ++ +EL+ + G S L++ L ++L+ + + Sbjct: 61 LYQLFPIATLIGALIGLGTLASRSELVAMRAAGISVGRLVRAALLGGLVLATIAVVLGEL 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +L + L+ + L F+ +DD Y+ I + +L+ I I D Sbjct: 121 VAPIAEQRAVELR-RLALSGEAAQLTPYGFWAIDDGAYVNIREIRSGTSLRDIDIY-RVD 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + + + +L + R + ++ + + +V Sbjct: 179 AAAGTLEASHAEGARYEDGRWVLEGIALSRVDGEGVQVERVEHAEWDSMLDPGLLKVVVA 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + L + + Y F ++ + + LI+I R Sbjct: 239 DPRALPVWGLYK-YIRFMSVNKQDASAYEIAFWSKVLHPVLTLSMILIAIPMLLG--SSR 295 Query: 301 QRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + + + + F+Y+ N + I LF +++ LL Sbjct: 296 STGMGRRMLAGILVGLVYYLVSRTFAYLALLFGMNAFLAAIAPPVLFIGAAMLLLRR 352 >gi|261855830|ref|YP_003263113.1| permease YjgP/YjgQ family protein [Halothiobacillus neapolitanus c2] gi|261836299|gb|ACX96066.1| permease YjgP/YjgQ family protein [Halothiobacillus neapolitanus c2] Length = 376 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 54/367 (14%), Positives = 123/367 (33%), Gaps = 12/367 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + + Y++R I L S + V + + V +++ S L P Sbjct: 1 MGTLDRYLIRAIVVGGLASTAAFALLIVVFGAIDELPKV-NASYSAIDALSFVLMTTPGY 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + L ++ ++EL ++ +G S L +PVL A +L++ + Sbjct: 60 LYDFYPAAVLVGGLLSLGNLAAHSELTVMRCSGMSMFRLARPVLVGATILALIGMLMGET 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I + ++ A+AQ + L+ L+ R D +I + + L + + Sbjct: 120 IGAWGQEKANEMRAEAQGSGVSMNLKSGLWLR-DGQRFINVGQAIVGGRLNRVRVFTVNA 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILND---GEVHRKSPISK-DISIMKFKSYTLQTESANSS 236 + S +I L D + K P + + + + + + Sbjct: 179 QSQPVQLLSASYAISEGGDLWRLYDVKESTLDTKVPGNSVKVRFVPVQEHVRLFSQKILN 238 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPEL-LETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 VL N+ L + + + +L Y S R+ + ++ +++ Sbjct: 239 IAVLNPRHMNILQL--HSYVDYLRKNQLDASAYSSALWARVFAPVSVLVMLFVALPFVFA 296 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPIL--YLFLFCISSIFLL 352 + I I L + + + + +IP + + + + + Sbjct: 297 PQRSGGAGRWLFIAIVLGVVYLTLVQIVSAFAPVYGVGHPFIPFMSAAVPPALFAMLGVY 356 Query: 353 MIKKKYT 359 ++ Y Sbjct: 357 AFRRLYP 363 >gi|288799848|ref|ZP_06405307.1| membrane protein [Prevotella sp. oral taxon 299 str. F0039] gi|288333096|gb|EFC71575.1| membrane protein [Prevotella sp. oral taxon 299 str. F0039] Length = 377 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 54/362 (14%), Positives = 134/362 (37%), Gaps = 10/362 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 +K + YI++ +++ S L I+ +A V + + + + L I+ +P Sbjct: 17 IKILDWYIIKKFIGTYIFSILLIISVAIVFDVNENLARFAQYHAPLKAIVFDYYANFVPY 76 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ I G S L++P + L+S+ + + Sbjct: 77 FANLFSPLFVFIAVIFFTSKLAGNSEIISILAAGVSFKRLMRPYMISCALISMLSYYLSS 136 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P + I+Q T + +N+ ++D + I Y+ N+ F +D Sbjct: 137 NVIPHG-TVIRQNFEALYKNKTKNTSADNVLLQVDKGVIAYIQHYDNNSKRGYGFSLDKF 195 Query: 180 DTQTHKIYYAQSG----SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + + + + +I + +++ + + + + I+ + + E + Sbjct: 196 NNKKLVSHLTATEIQYDTISDTKYHWTISNWKTRKLEGLKEKITTGAQRDTIIMMEPTDL 255 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + + L + + + Y+ E+HKR+ I I + + + Sbjct: 256 VYSKGQQETFTSAQLQDYISKQIDRGSSNVVQYQVEYHKRIASSFASFILTTIGLSLSSR 315 Query: 296 RALVRQRKKIHPIFISLSISFG-VFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + R+ + I L++SFG + I N I ++ S + Sbjct: 316 K---RKGGMGLYMGIGLALSFGYIMLQTVSATFAINANTPPIIAAWIPNIIFSLVAYFCY 372 Query: 355 KK 356 +K Sbjct: 373 RK 374 >gi|146308540|ref|YP_001189005.1| permease YjgP/YjgQ family protein [Pseudomonas mendocina ymp] gi|145576741|gb|ABP86273.1| permease YjgP/YjgQ family protein [Pseudomonas mendocina ymp] Length = 354 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 47/360 (13%), Positives = 122/360 (33%), Gaps = 11/360 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + L I+ +A + + ++ ++ L L P Sbjct: 1 MAKLDRYIGAQVFFAILTVLGIILGLALLFAFIDELSDLNKGDYGLGQALWYVLLTAPRR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ N+EL I+ G S ++ V+ ++L + + Sbjct: 61 AYEMLPMAALIGCLIGLGTLASNSELTIMRAAGVSIGRIVWAVMKPMLVLMLAGILIGEY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A AQ + ++ Y+ I+ P L G+ D Sbjct: 121 VAPLTENQAQADRALAQGGGAAQSSKRGMW-HRQGQEYVHINAVQPGGLLLGVTRYRFDD 179 Query: 181 TQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + +A+ D +L + + ++ + + + ++ ST+V Sbjct: 180 ERRLQSASFARRAEHRGDH--WVLRNVQTTFLHDNRSEVVNQREERWDIELSPQLLSTVV 237 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLF--PVIFGLISIVAADKRA 297 ++ +++ L + + Y F ++ Q L ++ IS + R+ Sbjct: 238 MEPESLSITGL-WQYIHYLAEQGLNNARYWLAFWTKVLQPLVTGALVLMAISFIFGPLRS 296 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ +F + + F + + + L I ++ + + ++ Sbjct: 297 VTLGQR----VFTGVLVGFIFRIAQDLLGPSSLVFGFSPLLAVLVPAGICALAGVWLLRR 352 >gi|315185937|gb|EFU19701.1| permease YjgP/YjgQ family protein [Spirochaeta thermophila DSM 6578] Length = 424 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 68/420 (16%), Positives = 138/420 (32%), Gaps = 74/420 (17%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y+ I SF++S LF I + Q L + S L ++ + Y +P+++ Sbjct: 8 TLYRYVGEEIALSFVISFLFFFVIFLINQFLLLAEQILSKRAPLFDVILLIIYALPSIVA 67 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + PF +T ++ + E L G S + P++ +LLS F++ + Sbjct: 68 ISVPFASLAAALMSITRLSSDNEFLAFQAGGISLLHAFLPMVVFGLLLSSVSFVANDYFL 127 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +L + LE + I I + + + I++ + Sbjct: 128 PLGTLNFAKLYRQILYTTPEIELESYAIKEYQN--TILIPGKVNQSHIDDLLIIEETEEG 185 Query: 183 THKIYYAQSGSIDLDRQ-----AIILNDGEVHRKSPISK-DISIMKFKSYTLQTESANSS 236 T I A+ G I R A+ L+D + + S + +YT+ + N + Sbjct: 186 TR-ILQAREGDIVPGRNEKTALALELHDVFLSLVKREGDYEYSSAETLTYTILVKDINIA 244 Query: 237 TIVLKANDQ----------------------------------NLSFLLNPNPNNPNYRP 262 + + +L + +N + R Sbjct: 245 LRNPGPREMSSVDVYRVMKEREQVLEQKRRSHEKERDDLRRSVSSLYLTTLSLSNESIRS 304 Query: 263 ELLETYRS-----------------------EFHKRLTQWLFPVIFGLISIVAADKRALV 299 L RS EFHK+ + + F L++I Sbjct: 305 RFLGNLRSSLQRLREKERIRIEDRTLQIYTLEFHKKFSIPFSCIPFVLLAIAIGL---FN 361 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF----LFCISSIFLLMIK 355 + + I + +S V+WG + + P L ++ + + ++ L +I+ Sbjct: 362 LKGGRAAGFGIGIFLSI-VYWGMLVAGQMLGLRTSFSPSLAMWVPNIIISLVALTLFLIR 420 >gi|254457924|ref|ZP_05071351.1| permease YjgP/YjgQ [Campylobacterales bacterium GD 1] gi|207085317|gb|EDZ62602.1| permease YjgP/YjgQ [Campylobacterales bacterium GD 1] Length = 339 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 61/329 (18%), Positives = 126/329 (38%), Gaps = 19/329 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+ + FL + + IA VI +++ + +L ++K+ +++P + Sbjct: 1 MDRLRKYIINNLYMIFLSMFMPLFAIASVIFMIKLATYTAVIQLTLWDMVKLYLFVLPEI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P F + T L ++ + E++++ G +IK + A LLS L + + Sbjct: 61 LFYTLPLTFFIAATLSLFRLSTDNEMVVLFALGIHPKFIIKTLFKPAALLSALLMFNFLV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +T+ + + L + F D + I K N N T + + +++ Sbjct: 121 LFPHA-TTLSSNFVSYKKSEAKFNLSASEFGHSFGDWLLYIGKDNENETYSDVILF-NKN 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + I A+ I D + L E S ++ S + F + + + Sbjct: 179 KKEEIIISAKRAEIINDAGILRLKLIEGEGYSYSKEEFSQIDFDTMYINDTMRTDLAVYR 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + LS + S+ H +T L + F LIS+ +V Sbjct: 239 TPLEYWLSN----------------DRKESKTHMMITDTLLSL-FPLISLFLVVSIGVVH 281 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKI 329 R + I++ L + +++G + + K Sbjct: 282 VRHQKGRIYLYLFLGVLLYYGATLGLQKS 310 >gi|332530549|ref|ZP_08406487.1| permease YjgP/YjgQ [Hylemonella gracilis ATCC 19624] gi|332039995|gb|EGI76383.1| permease YjgP/YjgQ [Hylemonella gracilis ATCC 19624] Length = 372 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 57/370 (15%), Positives = 124/370 (33%), Gaps = 19/370 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLV---SSSTESLNILLKISGYLIPT 59 + + R I + L + + + +++ V L L L P Sbjct: 6 TLRRLLFREILFTASFVTLAFLALFVFFDFIDQLSAVGRPDRPGFELPQALIYVVLLAPG 65 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 L + P + T V+T + +++E I+ +G + +L + + F+ + Sbjct: 66 HLYELLPITVLIGTIYVMTRLAQSSEFTILRTSGLGPWRALAMLLTAGGVFASATFVIGD 125 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLF---FRLDDDLYIKISKYNPNNTLQGIFIV 176 + P + A+ + S ++ + I I P+ TLQ + I Sbjct: 126 YLSPWSNQVAQAYRAQFRKE-GASTIKGGAWLREREPYAKYGINIGALLPDGTLQRVRIY 184 Query: 177 DSRDTQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK-----SYTLQT 230 + + A + I+ D Q+ L E + D+ ++ + Sbjct: 185 EIDNAGNLVSTLQASTARINND-QSWTLMGVERTEFNAAGPDVRRIETTQLPSYRWPTGI 243 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 + S VL + N L + + E Y +F K++ L ++ ++++ Sbjct: 244 SAEMISAAVLDPDRMNTVDLFL-YIGHLEDNAQNAERYEIQFWKKVFYPLSCLVMVMMAL 302 Query: 291 VAA-DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI---PILYLFLFCI 346 A + ++ F + F YI P+ P L LF + Sbjct: 303 PFAYLHFRNQGISLYVFGGVMAGVTFFFLNSMFGYIGELRHWTPWIAAATPGLIFMLFSL 362 Query: 347 SSIFLLMIKK 356 ++ L++K+ Sbjct: 363 AAFAWLVLKR 372 >gi|229496640|ref|ZP_04390354.1| permease, YjgP/YjgQ family [Porphyromonas endodontalis ATCC 35406] gi|229316537|gb|EEN82456.1| permease, YjgP/YjgQ family [Porphyromonas endodontalis ATCC 35406] Length = 358 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 64/362 (17%), Positives = 128/362 (35%), Gaps = 11/362 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPTVL 61 + YI+R ++ S L I+ +A V I +RI+ + SL I+ +P Sbjct: 4 RLDRYIIRLFLGTYFSSILLILSVAIVFDINERISKFLNPECSLYEIVFHYYLNFVPYYA 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M +P + + + TE++ I +G S L++P LF A ++++ F+ + + Sbjct: 64 NMFSPLFVFLSVIFFTSKLAEKTEIIAILASGVSFKRLLRPYLFSAAIVALLTFLLSSFV 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P K +Y E++ ++ L+ I Y+ +N F++D + Sbjct: 124 IPPGSRVRNDFQNKYFRDKRQTY-AESVQIQVSPSLFAYIHSYSADNKTGYNFMLDKFEH 182 Query: 182 QT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 T AQ+ D L D + R + T+ + + + Sbjct: 183 NTIKSRLTAQTAEYD-TLNTWRLYDYSITRYGAKRDTLERGTQLDTTINLKPQDFLISAV 241 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 A L + ++ E KR I +I + R Sbjct: 242 DAETYTTPVLHQYIGELKSRGATNVDLLEVELQKRYAAIPAAFILTIIGVSL-----SSR 296 Query: 301 QRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYL-FLFCISSIFLLMIKKKY 358 +RK + +++ I+ + F + + PI+ I +I + + KK Sbjct: 297 KRKGGTGLSLAIGIALSFTYILFLTLASSFSASGALSPIVAAQMPNAIYAIIAIFLYKKA 356 Query: 359 TK 360 + Sbjct: 357 PR 358 >gi|307718798|ref|YP_003874330.1| hypothetical protein STHERM_c11120 [Spirochaeta thermophila DSM 6192] gi|306532523|gb|ADN02057.1| hypothetical protein STHERM_c11120 [Spirochaeta thermophila DSM 6192] Length = 424 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 68/421 (16%), Positives = 141/421 (33%), Gaps = 74/421 (17%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y+ I SF++S LF I + Q L + S L ++ + Y +P+++ Sbjct: 8 TLYRYVGEEIALSFVISFLFFFVIFLINQFLLMAEQILSKRAPLFDVILLIIYALPSIVA 67 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + PF +T ++ + E L G S + P++ ++LLS F++ + Sbjct: 68 ISVPFASLAAALMSITRLSSDNEFLAFQAGGISLVHAFLPMVVFSLLLSSVSFVANDYFL 127 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +L + LE + I I + + + I++ + Sbjct: 128 PLGTLNFAKLYRQILYTTPEIELESYAIKEYQN--TILIPGKVNQSHIDDLLIIEETEEG 185 Query: 183 THKIYYAQSGSIDLDRQ-----AIILNDGEVHRKSPISK-DISIMKFKSYTLQTESANSS 236 T I A+ G I R A+ L+D + + S + +YT+ + N + Sbjct: 186 TR-ILQAREGDIVPGRNEKTALALELHDVFLSLVKREGDYEYSSAETLTYTILVKDINIA 244 Query: 237 TIVLKANDQ----------------------------------NLSFLLNPNPNNPNYRP 262 + + +L + +N + R Sbjct: 245 LRNPGPREMSSVDVYRVMKEREQVLEQKRRSHEKERDDLRRSVSRLYLTTLSLSNESIRS 304 Query: 263 ELLETYRS-----------------------EFHKRLTQWLFPVIFGLISIVAADKRALV 299 L + RS EFHK+ + + F L++I Sbjct: 305 RFLGSLRSSLQRLRQKERITIEDRTLQIYTLEFHKKFSIPFSCIPFVLLAIAIGL---FN 361 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF----LFCISSIFLLMIK 355 + + I + +S ++WG + + P L ++ L + ++ L +++ Sbjct: 362 LKGGRAAGFGIGIFLSI-LYWGMLVAGQMLGLRTSFSPSLAMWLPNILITLVALTLFLVR 420 Query: 356 K 356 K Sbjct: 421 K 421 >gi|212212731|ref|YP_002303667.1| hypothetical membrane spanning protein [Coxiella burnetii CbuG_Q212] gi|212011141|gb|ACJ18522.1| hypothetical membrane spanning protein [Coxiella burnetii CbuG_Q212] Length = 372 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 52/331 (15%), Positives = 121/331 (36%), Gaps = 21/331 (6%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ + I + L + L ++ I Q + +N ++ ++ +++I +P +L + Sbjct: 7 RYLCKEILGTLLATTLILLIIFMTNQFVHYLNDAAAGKITVKAVMEIMSLQVPLLLGYLL 66 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + L M + E++I+ G SR ++ ++ LA + + + +EPK Sbjct: 67 PLGLFLGGLLALGRMAVDHEMVILTACGVSRAQIVGMLIVLATFIGVIVAWLMLSVEPKM 126 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRL-DDDLYIKISKYNPNNT-LQGIFIVDSRDT-- 181 + ++ A + + F L + N ++ + +F+ S Sbjct: 127 QWYRVKILKDAVATASLEKIVPGRFQPLSSNGQVFYAGGVNDHHQKMLNVFLAQSETAGG 186 Query: 182 -QTHKIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 Q + A S I+ +G + P +MKF Y ++ S Sbjct: 187 KQRWDLVSADQAGEYSTAKGENFILFKNGFRYVGIPGELKYDVMKFGEYGIRLTSPAM-D 245 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 I + + S L + + + +E R+ L +F L+ + ++ Sbjct: 246 ITGRVDAMPTSKLWHLHSKDL--------KAAAELQWRIAMPLSVWLFALLIVPLSEANP 297 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHK 328 ++ K + ++ I G + F ++ Sbjct: 298 ---RKGKFAQMLPAVLIYIG-YANFMFLGRT 324 >gi|165919041|ref|ZP_02219127.1| putative permease [Coxiella burnetii RSA 334] gi|165917236|gb|EDR35840.1| putative permease [Coxiella burnetii RSA 334] Length = 370 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 52/331 (15%), Positives = 121/331 (36%), Gaps = 21/331 (6%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ + I + L + L ++ I Q + +N ++ ++ +++I +P +L + Sbjct: 5 RYLCKEILGTLLATTLILLIIFMTNQFVHYLNDAAAGKITVKAVMEIMSLQVPLLLGYLL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + L M + E++I+ G SR ++ ++ LA + + + +EPK Sbjct: 65 PLGLFLGGLLALGRMAVDHEMVILTACGVSRAQIVGMLIVLATFIGVIVAWLMLSVEPKM 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRL-DDDLYIKISKYNPNNT-LQGIFIVDSRDT-- 181 + ++ A + + F L + N ++ + +F+ S Sbjct: 125 QWYRVKILKDAVATASLEKIVPGRFQPLSSNGQVFYAGGVNDHHQKMLNVFLAQSETAGG 184 Query: 182 -QTHKIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 Q + A S I+ +G + P +MKF Y ++ S Sbjct: 185 KQRWDLVSADQAGEYSTAKGENFILFKNGFRYVGIPGELKYDVMKFGEYGIRLTSPAM-D 243 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 I + + S L + + + +E R+ L +F L+ + ++ Sbjct: 244 ITGRVDAMPTSKLWHLHSKDL--------KAAAELQWRIAMPLSVWLFALLIVPLSEANP 295 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHK 328 ++ K + ++ I G + F ++ Sbjct: 296 ---RKGKFAQMLPAVLIYIG-YANFMFLGRT 322 >gi|330836571|ref|YP_004411212.1| permease YjgP/YjgQ family protein [Spirochaeta coccoides DSM 17374] gi|329748474|gb|AEC01830.1| permease YjgP/YjgQ family protein [Spirochaeta coccoides DSM 17374] Length = 363 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 52/362 (14%), Positives = 115/362 (31%), Gaps = 5/362 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI+R FL + + + + ++ + + +L+++ IP Sbjct: 1 MKILDRYIMRSFLTVFLSALGICTLLLVAVDLFTNLDSYAKNEVPFFAILRLTVLYIPDA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V T L ++ + EL+ I G I +I P++ + I +S+ + Sbjct: 61 VSLVISPAVIFSATLTLALIHSSNELIPIFCAGIPYIRVIIPMMAVGICVSMTTLAATEY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 I R ++ + + T F + +Y+ + + +++ Sbjct: 121 IVIPSRVNRVEVQTEYTGSQTSKDNRNITFVDASGRFVLHAKRYDATRQRIMNMVLIERD 180 Query: 180 DTQTHKI--YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIM--KFKSYTLQTESANS 235 A D + IL+D + + +S S L E Sbjct: 181 GPGGRMTGRTSAGMAQWDETERRWILSDVSIQNFTEGDTVLSFHEDTLMSDILDIEPGLF 240 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 S + + + L N P T +++++R +L P I +I+ + Sbjct: 241 SYLGTDIKNMDRKTALWYLDNMKGLDPYQWATAATDYYERAYSFLTPFILMIIACSMNYQ 300 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 I + + + + +P L L L S + Sbjct: 301 YKKNVLLFSILTSIGIAIVFYVTQLVTLLLAKQYVISPLTGVFLPLGLMIALSSAFFLRV 360 Query: 356 KK 357 + Sbjct: 361 NR 362 >gi|90408709|ref|ZP_01216858.1| hypothetical protein PCNPT3_03815 [Psychromonas sp. CNPT3] gi|90310191|gb|EAS38327.1| hypothetical protein PCNPT3_03815 [Psychromonas sp. CNPT3] Length = 354 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 43/360 (11%), Positives = 121/360 (33%), Gaps = 23/360 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + + ++ ++ ++ +I+ ++++ V + + +P Sbjct: 1 MGILDRYIGKTVFAATFLTLFVLLGLSSIIKFVEQMRSVGQGSYDVLAAGYFVLLKMPVE 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + L S+ ++EL+++ G S+ + VL A+ + + + Sbjct: 61 MTVFFPMAALIGALIGLGSLASSSELVVMQAAGMSKFRIAGAVLKTAVPMVFAVMLLAEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI-FIVDSR 179 + P + A+ + + ++ + D +I I + N + L + F + Sbjct: 121 VAPVTDKEAYSMRDLARSGQSSVSNKYGVWVKDAD-AFISIGRMNSQSELFNVRFYFFNE 179 Query: 180 DTQTHKIYYAQS-----GSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 Q A+ G L+ + + D+ L ++ Sbjct: 180 SMQLDHAVLAKKVSYRGGYWLLEDSTWTKFESDRTNVEHKDSDVWQTDLTPKKLDVILSD 239 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 S + ++ +++L N + Y ++ V+ L+S+ Sbjct: 240 PSKMSMRDIYGYITYLEN--------NQQDANRYLLILWRKAVLPFTVVVMMLLSVSFIF 291 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + + + + G+ GF++ + P + L +L++ Sbjct: 292 GG--------LRTVTMGTRLILGIASGFAFHVSGELFGPASLVFGLSPLLGALLPSMLVL 343 >gi|270295684|ref|ZP_06201885.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270274931|gb|EFA20792.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 617 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 42/285 (14%), Positives = 100/285 (35%), Gaps = 29/285 (10%) Query: 14 RSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMET 73 F+ + +FI + + + ++ + + +L + Y +++P P + Sbjct: 1 MLFMGTFFICLFIFMMQFLWRYVDEMVGKGLEMTVLAQFFFYSALSLVPASLPLAILLAA 60 Query: 74 TNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLS 133 + ELL + G S + +++P++ + F +N+I PK ++ + L Sbjct: 61 LITFGNFGERFELLAMKAAGISLLKIMRPLIIFICFICCVSFYFQNVIGPKAQTKLWTLL 120 Query: 134 AKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSRDT-QTHKIYYAQS 191 + + E +F+ D + + N L + I + + +I + S Sbjct: 121 ISMKQKSPEVDIPEGVFYDEIDGYNLYVKHKNRKTGMLYDVLIYNFEKGFENAQIIKSDS 180 Query: 192 GSIDLDRQ----AIILNDGEV---------------HRKSPISKDISIMKFKSYTLQTES 232 G +++ + L GE +R+ + +I++F S Sbjct: 181 GRLEMTADKQHLYLHLYSGEQFENLKSQNMNQRNVPYRRETFREKHAIIEFNS-DFNMVD 239 Query: 233 ANSSTIVLKANDQNLSF-------LLNPNPNNPNYRPELLETYRS 270 A + + D + L N + Y+ + TY+ Sbjct: 240 AGIMSNQSNSKDMRMLQADIDSMKLQNDSVGRGYYKEAMAGTYKV 284 >gi|326796830|ref|YP_004314650.1| permease YjgP/YjgQ family protein [Marinomonas mediterranea MMB-1] gi|326547594|gb|ADZ92814.1| permease YjgP/YjgQ family protein [Marinomonas mediterranea MMB-1] Length = 353 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 54/363 (14%), Positives = 119/363 (32%), Gaps = 17/363 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLV--SSSTESLNILLKISGYLIP 58 M F+ YI + SF ++ + + L I+ V + + + N LL++ Y P Sbjct: 1 MSRFDRYIGSSVLWSFAAVIFVLLGLDF---ALTFIDQVKKVNDSYTTNALLQVLAYRAP 57 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 P + T L ++ +EL +I TG + +L+S+ Sbjct: 58 IKFAEYIPVASLIGTLIGLGALASTSELTVIRATGVPIWRIGFAACKPILLISLIGVGIS 117 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 + P + + L ++ + D ++ I+ + L I I Sbjct: 118 EYVSPYATQQADLIERLRGQSEGRFALTGGVWIK-SDGNFVYINAADREGVLYDIQIFTP 176 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 KI A+ D Q L + + +T + ++ Sbjct: 177 NGQALEKIQKAKFARHLSDNQ-WRLEQVTETHFLGDRIETGYKETVPWTASLKPSHLFLA 235 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI--VAADKR 296 + +LS L + + + Y+ EF + ++++ V R Sbjct: 236 SQEPEALSLSEL-HQYQSYLTGQELNAGLYQLEFWTKSLMPFACFALVIVALSSVFGPLR 294 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMI 354 + + + I + +F + K+ + P++ + + +I LL++ Sbjct: 295 SSTMGGRIFSGVLIGI-----MFQNGLNLFGKMSLALSFSPLIGVAIPIALCFAIGLLLM 349 Query: 355 KKK 357 +K Sbjct: 350 SRK 352 >gi|149378263|ref|ZP_01895975.1| predicted Permease [Marinobacter algicola DG893] gi|149357460|gb|EDM45970.1| predicted Permease [Marinobacter algicola DG893] Length = 353 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 125/358 (34%), Gaps = 8/358 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + Y++ +G + + L ++ + + + ++ + ++L LL +P Sbjct: 1 MRKIDRYVMSTVGGAMFLVMLVVLSLDLIFAFIAELDDAENDYQTLQALL-YVVMTLPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P M L +M ++EL +I G S ++ + +++ + + Sbjct: 60 IYDYLPLGAFMGCLVGLGTMASSSELTVIRAAGVSLKRIVWSAMKPTLVVVVLGVLIGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + AQ A ++ + D+++ ++ PN L G+ + D Sbjct: 120 VAPPAERMAQSQKTVAQGAGESIASASGIW-HREGDVFMHLNAVQPNGVLHGVSLFRFDD 178 Query: 181 TQ-THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + +A+ G D +L + R S + + + S ++ Sbjct: 179 ERWLVSASFAERGIYQGDH--WLLENVATTRLSDEKTTQETHRALRWETGLSPSVLSVLI 236 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 +K D +S L + + Y F K++ L + L++I + Sbjct: 237 VKPEDLAISGLYT-YASYLGEQGLNAANYWLAFWKKVLMPLGTAVMVLVAISFVFGP--L 293 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 R +F L + + + + + + I+++ ++ K+ Sbjct: 294 RSVTMGFRVFTGLIVGLLFKYMQDLLGPMSLVFGFNPVLAIILPIAINAVVGAVLMKR 351 >gi|212212730|ref|YP_002303666.1| hypothetical membrane spanning protein [Coxiella burnetii CbuG_Q212] gi|212011140|gb|ACJ18521.1| hypothetical membrane spanning protein [Coxiella burnetii CbuG_Q212] Length = 355 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 57/364 (15%), Positives = 125/364 (34%), Gaps = 16/364 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI I + + L ++ I ++ + +++ + S L +P+ Sbjct: 1 MPLLNRYIRNAIITATALVMLVLLGIEMFMEFIGQLSQIGSVHYGLGQAFLYVLTQLPSD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L + ++EL+++ G S + V+ A+L+ + + + Sbjct: 61 LYQLFPMAGFLGCLIGLGRLASSSELMVMRTAGVSIAGVTWAVVKAALLMMVVMTFIGEV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI---FIVD 177 I P+ ++ ++ A +++ +I I + N + + FI Sbjct: 121 IAPQLEASGEETKLTALSKAVGYKALGDVWLHGAQ-SFIHIGSVDAKNKISEVSQFFI-- 177 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI-SKDISIMKFKSYTLQTESANSS 236 + Q YA G IL + + + +P + + I KF T+ + Sbjct: 178 NNKHQLLSAVYAPKGEYVKGH--WILYNVKQTQFTPNRTTEKKIAKFP-LTIVFNPDHLQ 234 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + Q++ L + Y F +R Q L V+ + + Sbjct: 235 QGRKMVDRQSIVGLYH-TIRYRQQAGLQTSRYVFAFWQRFIQPLTTVVMICLGVPFIFG- 292 Query: 297 ALVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 +RQ I + I F + F + P + ++ LF + + LL Sbjct: 293 -SLRQASMGWRILTGIVIGFAFYMLNQFFGPFAMVYQIPPIFAALMPTVLFAVGCVILLR 351 Query: 354 IKKK 357 ++ Sbjct: 352 YSRR 355 >gi|317503389|ref|ZP_07961433.1| conserved hypothetical protein [Prevotella salivae DSM 15606] gi|315665484|gb|EFV05107.1| conserved hypothetical protein [Prevotella salivae DSM 15606] Length = 385 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 62/368 (16%), Positives = 128/368 (34%), Gaps = 30/368 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 +K + YI++ +++ S I+ I+ VI I + + S L I+ IP Sbjct: 25 IKRLDWYIIKKFIGTYIYSIALIISISIVIDINENLAKFSEYHAPLKAIVFDYYMNFIPY 84 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + G S L++P + IL+S+ F Sbjct: 85 FANLFSPLFVFIAVIFFTSKLAGNSEIIAMLAAGVSFKRLMRPYMISCILISVVSFYLSG 144 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDS 178 + P I+Q + +N+ + I Y+ N G + Sbjct: 145 YVIPHSNV-IRQNFESLYKNKKKTTAADNVMLNVGKGTIAYIQHYDNNTKRGYGFSLDKF 203 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 +D + A D + + +++ I KF Y Q E+ Sbjct: 204 QDKKLVSHMTAMEIQYDTISDS---------KYHWTAQNYKIRKFNGYREQIENGAKRDT 254 Query: 239 VLKANDQNLSF-------LLNPNPNNPNYRPELLE-----TYRSEFHKRLTQWLFPVIFG 286 + +L + NP ++ + Y+ E+HKR+ I Sbjct: 255 TILMEPNDLVYSKGQQETFTNPELSDYISKQIDRGSSNVVQYQVEYHKRIAASFASFILT 314 Query: 287 LISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLF 344 +I + + K+ R+ + I L++SFG + + N PI+ ++ Sbjct: 315 IIGLSLSAKK---RKGGMGMYLGIGLALSFG-YIMLQTVSSTFAINANLPPIIAAWIPNI 370 Query: 345 CISSIFLL 352 + + Sbjct: 371 IFAIVAYF 378 >gi|212218293|ref|YP_002305080.1| hypothetical membrane spanning protein [Coxiella burnetii CbuK_Q154] gi|212012555|gb|ACJ19935.1| hypothetical membrane spanning protein [Coxiella burnetii CbuK_Q154] Length = 372 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 52/331 (15%), Positives = 121/331 (36%), Gaps = 21/331 (6%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ + I + L + L ++ I Q + +N ++ ++ +++I +P +L + Sbjct: 7 RYLCKEILGTLLATTLILLIIFMTNQFIHYLNDAAAGKITVKAVMEIMSLQVPLLLGYLL 66 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + L M + E++I+ G SR ++ ++ LA + + + +EPK Sbjct: 67 PLGLFLGGLLALGRMAVDHEMVILTACGVSRAQIVGMLIVLATFIGVIVAWLMLSVEPKM 126 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRL-DDDLYIKISKYNPNNT-LQGIFIVDSRDT-- 181 + ++ A + + F L + N ++ + +F+ S Sbjct: 127 QWYRVKILKDAVATASLEKIVPGRFQPLSSNGQVFYAGGVNDHHQKMLNVFLAQSETAGG 186 Query: 182 -QTHKIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 Q + A S I+ +G + P +MKF Y ++ S Sbjct: 187 KQRWDLVSADQAGEYSTAKGENFILFKNGFRYVGIPGELKYDVMKFGEYGIRLTSPAM-D 245 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 I + + S L + + + +E R+ L +F L+ + ++ Sbjct: 246 ITGRVDAMPTSKLWHLHSKDL--------KAAAELQWRIAMPLSVWLFALLIVPLSEANP 297 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHK 328 ++ K + ++ I G + F ++ Sbjct: 298 ---RKGKFAQMLPAVLIYIG-YANFMFLGRT 324 >gi|88810479|ref|ZP_01125736.1| putative permease [Nitrococcus mobilis Nb-231] gi|88792109|gb|EAR23219.1| putative permease [Nitrococcus mobilis Nb-231] Length = 358 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 55/360 (15%), Positives = 120/360 (33%), Gaps = 4/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI R + L+ L IV + + L+ ++ + L P Sbjct: 1 MKLIDRYIARNVTAGTLIVLLVIVSLDLLFNFLKESQDSGQGDYTVWLALLYVLLTTPYS 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 PF + + L + +EL+++ TG S +T+ +P++ + L++ Sbjct: 61 AYQAFPFATLIGSLIGLGGLAARSELVVMRGTGMSALTIARPLVMAGLSLALLAMGVGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ +L +A + E F+ D D Y+ + + L+ + I + Sbjct: 121 LAPRTDRLATELQTRAVGGQLSAGGESG-FWARDGDRYVHARQVPEADVLEDLQIYAFQG 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + I A + + L H + S +S Y + + +V+ Sbjct: 180 VRLDHITTAWRAHYEQGVWML-LAPVTTHFAADGSVRVSRAASARYRSELKPDMLDVVVV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + ++ L YR F ++ L V L+++ Sbjct: 239 EPEVLPITQL-WIYTRYLERNGLDSSRYRLAFWVKVATPLATVTMLLLTVPLVFGSLRSA 297 Query: 301 QRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYT 359 + I + + I+F + + P + LF ++ L+ + + Sbjct: 298 NMGQRIFIGVLIGIAFFLLNRLLNRAAMVFGLPPLVSALGPTVLFLGIALGSLVRLSRRS 357 >gi|119513620|ref|ZP_01632629.1| permease YjgP/YjgQ [Nodularia spumigena CCY9414] gi|119461725|gb|EAW42753.1| permease YjgP/YjgQ [Nodularia spumigena CCY9414] Length = 385 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 48/379 (12%), Positives = 122/379 (32%), Gaps = 23/379 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIA-WVIQILQRINLVSSSTESLNILLKISGYLIPT 59 + E Y++ + L S + +A + ++ + + IL+ + +P Sbjct: 10 LSLLERYLISELIPPLLFSIAIVTIVAESIGISFEQFKFLIERQLTFEILIYLHLLKLPE 69 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + P + T ++ +E++ I + G S L+ P + +A LL LFI Sbjct: 70 FIVFAAPIAVLLATIFTYKKLSNTSEIIAIHSCGVSLDKLVYPAVMVAALLIPVLFIFNE 129 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-------------LYIKISKYNP 166 +I KA + + ++F++ D+ ++ ++ Sbjct: 130 VIVIPANYKAAITLEKAMNINRLYFQKNDIFYQQIDNENTLDSLAQQNYLKHLLYAERFA 189 Query: 167 NNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSY 226 + +Q + ++ + I ++ ++ +G + + +KF + Sbjct: 190 DGQMQQVTLLMRDSEKLKVIIKSRFAECYGQQKFCYFYEGVKNIINADGSYGERIKFDTM 249 Query: 227 TLQTES----ANSSTIVLKANDQNLSFLLNPNPN-NPNYRPELLETYRSEFHKRLTQWLF 281 L + L + N+ + + + +R T + Sbjct: 250 PLYLPNIALQLQIDQETLDNREMNIFQVYQRLLVFQKAGDRRNFRSLQVNIQERFTLPVS 309 Query: 282 PVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL 341 +F L+ ++ R + + ++L I I ++L Sbjct: 310 CAVFALLGSAI---GINLQPRTRYNSFSLTLGIILLYDAIQVIAKIFIISEIISFSWIWL 366 Query: 342 FLFCISSI-FLLMIKKKYT 359 +++ L+IKK Sbjct: 367 PNIVGTTVGVYLLIKKNSP 385 >gi|332292438|ref|YP_004431047.1| permease YjgP/YjgQ family protein [Krokinobacter diaphorus 4H-3-7-5] gi|332170524|gb|AEE19779.1| permease YjgP/YjgQ family protein [Krokinobacter diaphorus 4H-3-7-5] Length = 358 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 48/362 (13%), Positives = 127/362 (35%), Gaps = 9/362 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI++ +F+ + + I ++ + ++I+ + ++ + Sbjct: 1 MKILDWYIVKRYIGTFVTMLVLFIPIGIIVNLAEKIDKILANEAPFGEVALYYLNFTIYF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + + + NTE++ ++G S ++P L A ++ + F Sbjct: 61 ANLLFPLFLFLSVIWFTSKLANNTEVIAFLSSGVSFYRFLRPYLIGATIVCVGAFFLGTY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ + + +N++ ++D YI +S + P F + + Sbjct: 121 LAPRANKGYNEFIFEYLKKNKKDRETQNVYRQIDTGDYIYVSSFTPRTKTGRNFTWEHFE 180 Query: 181 TQTHKIYY-AQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 A + + LN + + + + + + + Sbjct: 181 GNKMTYKMSAIRIRYNEEDTTYTLNSFKKRTITENGDILESKAKLDTVFNFDMDDLTPVE 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 A + L + + Y KR + + I +I++ A+ Sbjct: 241 YIAETLSTPELRKFIAKEKSRGSSYISRYEVTLQKRYSLPVAAYILTIIAVAV---SAMK 297 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF----LFCISSIFLLMIK 355 R+ + + ++F VF F + + + + P++ ++ LF I +++LL Sbjct: 298 RRGGMGINLAFGIVLAF-VFIFFDKVFGTLAEQSDFPPLVAVWTPNILFAILAVYLLRNA 356 Query: 356 KK 357 K+ Sbjct: 357 KR 358 >gi|153209375|ref|ZP_01947370.1| putative permease [Coxiella burnetii 'MSU Goat Q177'] gi|120575375|gb|EAX31999.1| putative permease [Coxiella burnetii 'MSU Goat Q177'] Length = 370 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 52/331 (15%), Positives = 121/331 (36%), Gaps = 21/331 (6%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ + I + L + L ++ I Q + +N ++ ++ +++I +P +L + Sbjct: 5 RYLCKEILGTLLATTLILLIIFMTNQFIHYLNDAAAGKITVKAVMEIMSLQVPLLLGYLL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + L M + E++I+ G SR ++ ++ LA + + + +EPK Sbjct: 65 PLGLFLGGLLALGRMAVDHEMVILTACGVSRAQIVGMLIVLATFIGVIVAWLMLSVEPKM 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRL-DDDLYIKISKYNPNNT-LQGIFIVDSRDT-- 181 + ++ A + + F L + N ++ + +F+ S Sbjct: 125 QWYRVKILKDAVATASLEKIVPGRFQPLSSNGQVFYAGGVNDHHQKMLNVFLAQSETAGG 184 Query: 182 -QTHKIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 Q + A S I+ +G + P +MKF Y ++ S Sbjct: 185 KQRWDLVSADQAGEYSTAKGENFILFKNGFRYVGIPGELKYDVMKFGEYGIRLTSPAM-D 243 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 I + + S L + + + +E R+ L +F L+ + ++ Sbjct: 244 ITGRVDAMPTSKLWHLHSKDL--------KAAAELQWRIAMPLSVWLFALLIVPLSEANP 295 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHK 328 ++ K + ++ I G + F ++ Sbjct: 296 ---RKGKFAQMLPAVLIYIG-YANFMFLGRT 322 >gi|156935579|ref|YP_001439495.1| hypothetical protein ESA_03443 [Cronobacter sakazakii ATCC BAA-894] gi|156533833|gb|ABU78659.1| hypothetical protein ESA_03443 [Cronobacter sakazakii ATCC BAA-894] Length = 360 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 58/358 (16%), Positives = 132/358 (36%), Gaps = 5/358 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI R I + +M+ +V ++ +I+ + ++ + + + +P + Sbjct: 5 SVLDRYIGRTIFNTIMMTLFMLVSLSGIIKFVDQLKKTGEGSYTALGAGTYTLLSVPKDI 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L + + +EL+++ +G +R+ + V+ AI L IF + Sbjct: 65 QIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVAASVMKTAIPLVIFTMAIGEWV 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + L A+ + ++ ++ + ++ ++ I + N L GI I D Sbjct: 125 APQGEQMARNLRAQQMYGGSLLSTQQGMWAKDGNN-FVYIERVKGENELGGISIYAFNDK 183 Query: 182 QT-HKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + YA + D + + L+ E + K+P S ++ + Sbjct: 184 RRLESVRYAANAKFDAEHKLWRLSQVDESNLKNPQQITGSQTLTGTWKTNLTPDKLGVVA 243 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L + ++S L N + Y+ ++ Q L + L+++ Sbjct: 244 LDPDALSISGLRN-YVKYLKASGQDASRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRS 302 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP-ILYLFLFCISSIFLLMIKK 356 IS F V + + P I +L F + S++LLM + Sbjct: 303 VPMGVRVVTGISFGFIFYVLDQIFGPLSLVYGIPPIIGALLPSASFFLISLWLLMKRA 360 >gi|299140954|ref|ZP_07034092.1| membrane protein [Prevotella oris C735] gi|298577920|gb|EFI49788.1| membrane protein [Prevotella oris C735] Length = 424 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 61/368 (16%), Positives = 130/368 (35%), Gaps = 30/368 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 +K + YI++ +++ S I+ I+ V+ I + + S L I+ IP Sbjct: 64 IKRLDWYIIKKFIGTYIYSIALIISISIVVDINENLAKFSEYHAPLKAIVFDYYMNFIPY 123 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + G S L++P + IL+S F Sbjct: 124 FANLFSPLFVFIAVIFFTSKLAGNSEIIAMLAAGVSFKRLMRPYMITCILISAVSFYLSG 183 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDS 178 + P I+Q + +N+ ++ + I +Y+ N G + Sbjct: 184 YVIPHSNV-IRQDFESLYKNNKKNTAADNVMLQVGSGVIAYIQQYDNNTKRGYGFSLDKF 242 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 +D + A D + + + + I KF Y Q E+ Sbjct: 243 QDKKLVSHMTATEIQYDTISDS---------KYHWTALNYKIRKFNGYREQIENGEKKDT 293 Query: 239 VLKANDQNLSF-------LLNPNPNNPNYRPELLE-----TYRSEFHKRLTQWLFPVIFG 286 + +L + NP ++ + Y+ E+HKR+ I Sbjct: 294 TIMMEPTDLVYSKGQQETFTNPELSDYISKQIDRGSSNVVQYQVEYHKRIAASFASFILT 353 Query: 287 LISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLF 344 +I + + K+ R+ + I L++SFG + + N P++ ++ F Sbjct: 354 IIGLSLSAKK---RKGGMGLYLGIGLALSFG-YIMLQTVSSTFAINANLPPVIAAWIPNF 409 Query: 345 CISSIFLL 352 + + Sbjct: 410 IFAVVAYF 417 >gi|237653448|ref|YP_002889762.1| permease YjgP/YjgQ family protein [Thauera sp. MZ1T] gi|237624695|gb|ACR01385.1| permease YjgP/YjgQ family protein [Thauera sp. MZ1T] Length = 358 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 50/351 (14%), Positives = 122/351 (34%), Gaps = 4/351 (1%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ R I + + + + + + + V +L L G +P + + Sbjct: 7 RYLAREIFAASALVLVAFLGLFAFFDFINELEDVGKGGYTLYQALVYVGLTLPARVYELM 66 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + T L ++ +N+E+ ++ +G S L + + + ++ +F+ + P Sbjct: 67 PIAVLIGTLYALATLAKNSEITVMRASGMSNALLTSVLGLIGGVFAVLIFLVGEYVAPPA 126 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-DSRDTQTH 184 + ++ A A L L+ + D L + + P+ +++G I D Sbjct: 127 EAAAEEWKLTATQATVSQQLRSGLWVK-DGRLVLNVRTLMPDRSMRGARIYAFDEDYALE 185 Query: 185 KIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAND 244 I A +G D + L D + R +I + + + +++ Sbjct: 186 SIAEAATGVFDGSGE-WKLLDVQRTRFHGDRTEIERLPEIRWRSELTPEVLGVLMVSPEH 244 Query: 245 QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKK 304 L N+ + + + K+L ++ +++ + Sbjct: 245 MPFGRL-WTYINHLRDNNQNADRFEIALWKKLIYPFTALVMMALAMPFGFIHDRMGGASA 303 Query: 305 IHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + L + F + G + I P ++ L L +++ F LM + Sbjct: 304 RIFMGVMLGVGFHLLNGLFSNLGMINAWPPFMAALTPSLIFLAAAFWLMHR 354 >gi|209964086|ref|YP_002297001.1| predicted permease YjgP [Rhodospirillum centenum SW] gi|209957552|gb|ACI98188.1| predicted permease YjgP [Rhodospirillum centenum SW] Length = 359 Score = 101 bits (251), Expect = 3e-19, Method: Composition-based stats. Identities = 48/360 (13%), Positives = 119/360 (33%), Gaps = 26/360 (7%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y+ R L + + + ++ +L + V +L L + +P+++ Sbjct: 3 GTLARYLSRQFLVRSLAVLVALTALLQLLDLLDAASRVLERGGALGDLGTYALLRLPSIV 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + + L + +N E++ + + G + L+ ++ A+ +++F I + I Sbjct: 63 ERLVPLAVLVGSLTTLYGLVQNNEIVAMRSAGLTPYQLLATLMPAAVAIAVFHLILSDQI 122 Query: 122 EPKCRSTIKQLSAKAQ--LALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 P+ A+ + E+ L+ R+ + + L+ + + R Sbjct: 123 APRAERAFLTWWAETEPPTDDDLPLAEKKLWLRVGNTIVAAERVLERGARLEQVSLY-PR 181 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 D Q ++ + L DG + + E + Sbjct: 182 DDQGRVTERTRAAAAVYGDGNWTLLDGTRLDLTRG------------DFKAEPFARAPWP 229 Query: 240 LKANDQNLSFLLNPNPNNPNYR-----------PELLETYRSEFHKRLTQWLFPVIFGLI 288 ++ + N+ +L P N P R + Y + H+ L +I L+ Sbjct: 230 VRLHPANVVEVLQPTENIPLLRLRSILRGDWAGRQSPAYYETRLHETYAGPLATLIMVLL 289 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 + A + I + +++ + G + + P I +F + Sbjct: 290 AAPVAHGMRRSGAVGGSMALGIGIGLTYLLADGMLAALGEAGAMPAVIAAWAPTVFFAAV 349 >gi|149178410|ref|ZP_01857000.1| hypothetical protein PM8797T_01869 [Planctomyces maris DSM 8797] gi|148842727|gb|EDL57100.1| hypothetical protein PM8797T_01869 [Planctomyces maris DSM 8797] Length = 392 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 54/395 (13%), Positives = 126/395 (31%), Gaps = 46/395 (11%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + Y+L + R F + + + + Q+ +S + ++LKI +++P++ Sbjct: 1 MRLLQRYVLFELLRVFTLMITVLTVLLVFVGAFQQ---ATSQGLGVILVLKILPFIVPSM 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP P + V + + E+ G + ++L+ P L LS+ I + Sbjct: 58 LPFTIPATLLLTVCVVYGRIAGDQEITAAKAAGINVLSLLWPSFILGGFLSLGSLILSDQ 117 Query: 121 IEPKCRSTIKQLSA-KAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 I P I+ A + + +N + I + L F S Sbjct: 118 IIPWAEKNIENTIACELETIFLEKLRSQNQIHDPTSGISITVMGVRNKTLLVPTFRY-SP 176 Query: 180 DTQTHKIYYAQSGSIDLD--RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ +++ D Q +IL+ + H P ++ ++ S + Sbjct: 177 PNKKPVHLQAEEATLEFDLTNQQVILHISKGHIDFPGKPRF-FVEKDTFPFPLPSQTTMA 235 Query: 238 IVLKANDQNLSFLL-----------------------------------NPNPNNPNYRP 262 + +++ L N + ++ Sbjct: 236 KPRHMSVKSIKSELVDLSEKKNEFEFQRDIEVAMLLALGDFEHFQSPEVNTDLPQNQFQE 295 Query: 263 ELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGF 322 + ++ R F L+ + +A R++ + L I + Sbjct: 296 KRQNKLKTALSSRFALSCSCFFFVLVGCPFSIAQA--RRQFLTSFFLVFLPILLFYYPIV 353 Query: 323 SYIIHKIEQ-NPYYIPILYLFLFCISSIFLLMIKK 356 I+ +Q L+ + + + M++K Sbjct: 354 LLAINLAKQGKIEPTWSLWAGNAGLLIVAIHMLRK 388 >gi|300935934|ref|ZP_07150887.1| putative inner membrane protein [Escherichia coli MS 21-1] gi|300458870|gb|EFK22363.1| putative inner membrane protein [Escherichia coli MS 21-1] Length = 360 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 54/361 (14%), Positives = 128/361 (35%), Gaps = 11/361 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + + I++ ++ + + + L + +P Sbjct: 5 GVLDRYIGKTI---FTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVP 61 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L + + +EL+++ +G +R+ + V+ AI L + Sbjct: 62 KDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIG 121 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-D 177 + P+ + A+A + ++ L+ + ++ ++ I + + L GI I Sbjct: 122 EWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNN-FVYIERVKGDEELGGISIYAF 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + + YA + D + + L+ E +P S ++ Sbjct: 181 NENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + ++S L N + Y+ ++ Q L + L+++ Sbjct: 241 VVALDPDALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 IS F V F + +P +L F + S++LLM K Sbjct: 300 LRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGISPIIGALLPSASFFLISLWLLMRK 359 Query: 356 K 356 Sbjct: 360 S 360 >gi|317014475|gb|ADU81911.1| hypothetical protein HPGAM_05615 [Helicobacter pylori Gambia94/24] Length = 345 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 63/357 (17%), Positives = 136/357 (38%), Gaps = 19/357 (5%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ + + F L + FI+ ++ ++ ++ S L+++ Y +P + + Sbjct: 4 HYLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFIL 63 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P F L+ ++ + ELL+ + G S T+ K + L++L+S L + I+ P Sbjct: 64 PITFFAACALGLSRLSYDHELLVFFSLGVSPKTMTKAFVPLSLLVSAILLVFSLILIPTS 123 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHK 185 +S + + + F + D + + K NN+ + + ++ Sbjct: 124 KSAYYGFLRQ-KKDKIDINIRAGEFGQKLGDWLVYVDK-TENNSYDNLVLFSNKSLSQES 181 Query: 186 IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL--QTESANSSTIVLKAN 243 AQ G+I+ LN H + + F+ L + +S NS+ Sbjct: 182 FILAQKGNINNQNGVFELNLYNGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYLQG 241 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 L + N N + +R +Q + +F L S+ + R Sbjct: 242 TDYLGYWKKAFGKNANKNQK----------RRFSQAILVSLFPLASVFLIPLFGIANPRF 291 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL--MIKKKY 358 K + + + + GV+ ++H I + + + + F++ +S L I K+Y Sbjct: 292 KTNWSYFYVLGAVGVY---FLMVHVISTDLFLMTFFFPFIWAFASYLLFRKFIVKRY 345 >gi|71901308|ref|ZP_00683405.1| permease YjgP/YjgQ [Xylella fastidiosa Ann-1] gi|71728928|gb|EAO31062.1| permease YjgP/YjgQ [Xylella fastidiosa Ann-1] Length = 408 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 41/281 (14%), Positives = 103/281 (36%), Gaps = 17/281 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L +SF+ + + ++ + ++ + ++ +LL G + Sbjct: 48 MPKLDRYLLSDFTQSFIATLIVLMLVGVGGVLVDILGSIADGHFPAKLLLSQLGLRFISY 107 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP++ P + L + R++E+ +I + G ++ +L LA+ + + + + Sbjct: 108 LPLLLPLALMLGLLLSLGRLYRDSEMAVITSIGVGPGRMLPSILGLALPVVVLIGVCSLW 167 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSR 179 + P T L +A ++ + LE F + D + +S + + T L +F+ + Sbjct: 168 LAPWANRTANDLLEQANRSIIMAGLEAGTFTPMPDGGVVYLSSLSSDGTKLNAVFMQSQK 227 Query: 180 DTQTHKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISK--DISIMKFKSYTLQTESAN 234 D + A+ G + + + L DG+ + ++ F + Sbjct: 228 D-DRIAVVTAKRGEMYVQGDKGRYLRLEDGQRVDGPTDGAALNYRVLTFARNDALLPELS 286 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKR 275 + L+ + +++ H R Sbjct: 287 VVYDSNHPDILPTFNLI----------GDPRREAQAQLHAR 317 >gi|281424311|ref|ZP_06255224.1| putative membrane protein [Prevotella oris F0302] gi|281401580|gb|EFB32411.1| putative membrane protein [Prevotella oris F0302] Length = 432 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 60/357 (16%), Positives = 127/357 (35%), Gaps = 28/357 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 +K + YI++ +++ S I+ I+ V+ I + + S L I+ IP Sbjct: 72 IKRLDWYIIKKFIGTYIYSIALIISISIVVDINENLAKFSEYHAPLKAIVFDYYMNFIPY 131 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + G S L++P + IL+S F Sbjct: 132 FANLFSPLFVFIAVIFFTSKLAGNSEIIAMLAAGVSFKRLMRPYMITCILISAVSFYLSG 191 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDS 178 + P I+Q + +N+ ++ + I +Y+ N G + Sbjct: 192 YVIPHSNV-IRQDFESLYKNNKKNTAADNVMLQVGSGVIAYIQQYDNNTKRGYGFSLDKF 250 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 +D + A D + + + + I KF Y Q E+ Sbjct: 251 QDKKLVSHMTATEIQYDTISDS---------KYHWTALNYKIRKFNGYREQIENGEKKDT 301 Query: 239 VLKANDQNLSF-------LLNPNPNNPNYRPELLE-----TYRSEFHKRLTQWLFPVIFG 286 + +L + NP ++ + Y+ E+HKR+ I Sbjct: 302 TIMMEPTDLVYSKGQQETFTNPELSDYISKQIDRGSSNVVQYQVEYHKRIAASFASFILT 361 Query: 287 LISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 +I + + K+ R+ + I L++SFG + + N P++ ++ Sbjct: 362 IIGLSLSAKK---RKGGMGLYLGIGLALSFG-YIMLQTVSSTFAINANLPPVIAAWI 414 >gi|157147732|ref|YP_001455051.1| hypothetical protein CKO_03536 [Citrobacter koseri ATCC BAA-895] gi|157084937|gb|ABV14615.1| hypothetical protein CKO_03536 [Citrobacter koseri ATCC BAA-895] Length = 360 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 58/363 (15%), Positives = 127/363 (34%), Gaps = 15/363 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + + I++ ++ + + + L + +P Sbjct: 5 GVLDRYIGKTI---FTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVP 61 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L + + +EL+++ +G +R+ + V+ AI L + Sbjct: 62 KDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIG 121 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-- 176 + P+ + A+A + ++ L+ + ++ ++ I + + L GI I Sbjct: 122 EWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNN-FVYIERVKGDEELAGISIYAF 180 Query: 177 -DSRDTQTHKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESAN 234 D R + + YA S D D + L+ E K P S ++ Sbjct: 181 NDQR--RLQSVRYAASAKFDADNKVWRLSQVDESDLKDPKQITGSQTVSGTWKTNLTPDK 238 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + L + ++S L N + Y+ ++ Q L + L+++ Sbjct: 239 LGVVALDPDALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIF 297 Query: 295 KRALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 IS F V F + P +L F + S++L+M Sbjct: 298 GPLRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLMM 357 Query: 354 IKK 356 K Sbjct: 358 RKS 360 >gi|157164267|ref|YP_001466583.1| ribonuclease PH [Campylobacter concisus 13826] gi|112800701|gb|EAT98045.1| permease YjgP/YjgQ [Campylobacter concisus 13826] Length = 342 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 64/356 (17%), Positives = 128/356 (35%), Gaps = 27/356 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTE-SLNILLKISGYLIPT 59 M Y+L +F S +F+ I +I ++S E S L K+ +++P Sbjct: 1 MSRVNKYLLFNFLGTF-ASLFSTLFLIMSIVFFIQIARITSYIEISFGELFKLYSFMLPR 59 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 VL V P F + L +++ E ++I G S + + L + +LS L + Sbjct: 60 VLLFVVPIAFFVSLAMTLFRLSKENESIVIFTLGGSPNKIARFFLAFSAILSAALLVIAI 119 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN---TLQGIFIV 176 ++ P + + + + L+ F + D + + + + T + I + Sbjct: 120 VMIPIA-AQLNANFIDYKKTVAKLNLKPTQFGQKFSDWMVYVGSESEDKNGTTYKDIVMF 178 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + ++ A++ I Q+I L+ E + FKS ++T + Sbjct: 179 NPFVKDSQRLITAKNAKITNVNQSIELSLNEGKMYDIKDEIYHQSNFKSMKIRTAQSEEI 238 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + V + + + N R + TY LFP+ L +I Sbjct: 239 SDVGSIKEYWMEA------ASSNKRKKDFSTYVL-------VALFPLASTLFAISLGI-- 283 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY-IPILYLFLFCISSIFL 351 R K + + FGV +G+ +I P IP+++ + Sbjct: 284 VTYRYEKGMVYVGT-----FGVLFGYFTLIMLFSSKPALAIPLIFFVFLIAGVLLY 334 >gi|15642495|ref|NP_232128.1| hypothetical protein VC2499 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|227082618|ref|YP_002811169.1| putative Inner membrane protein [Vibrio cholerae M66-2] gi|229507443|ref|ZP_04396948.1| hypothetical protein VCF_002672 [Vibrio cholerae BX 330286] gi|229509632|ref|ZP_04399113.1| hypothetical protein VCE_001032 [Vibrio cholerae B33] gi|229516757|ref|ZP_04406203.1| hypothetical protein VCC_000774 [Vibrio cholerae RC9] gi|229606949|ref|YP_002877597.1| hypothetical protein VCD_001858 [Vibrio cholerae MJ-1236] gi|254851044|ref|ZP_05240394.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255744522|ref|ZP_05418474.1| putative membrane protein [Vibrio cholera CIRS 101] gi|298500670|ref|ZP_07010474.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|9657080|gb|AAF95641.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|227010506|gb|ACP06718.1| putative Inner membrane protein [Vibrio cholerae M66-2] gi|229345820|gb|EEO10792.1| hypothetical protein VCC_000774 [Vibrio cholerae RC9] gi|229353106|gb|EEO18045.1| hypothetical protein VCE_001032 [Vibrio cholerae B33] gi|229354948|gb|EEO19869.1| hypothetical protein VCF_002672 [Vibrio cholerae BX 330286] gi|229369604|gb|ACQ60027.1| hypothetical protein VCD_001858 [Vibrio cholerae MJ-1236] gi|254846749|gb|EET25163.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255738047|gb|EET93440.1| putative membrane protein [Vibrio cholera CIRS 101] gi|297540839|gb|EFH76896.1| conserved hypothetical protein [Vibrio cholerae MAK 757] Length = 356 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 55/357 (15%), Positives = 131/357 (36%), Gaps = 6/357 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I + + + V ++ +I+ ++++ V + L L IP + Sbjct: 3 KILDWYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGEGSYDLLQALLFVVLSIPRDV 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L ++ ++EL+++ G S++ + VL AI L I + + Sbjct: 63 EMFFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIIVTLLGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + + A A + ++ R +D +I I+K + + Sbjct: 123 APQAQKMARDMRAFATSGGAIMSVRTGVWARDAND-FIFIAKVENEHLYGLNLWRFDENK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--STIV 239 + + +++ + + ++ D + R +IS Y +T A + + Sbjct: 182 KLSTVIFSEQVDYVANNE-WLMKDAVLTRL-VNDIEISKESLPEYRWRTSLAPDKLAVVT 239 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 +K + +L+ L + + + Y +++TQ + + L+++ Sbjct: 240 VKPEELSLTGLSD-YVHYLKASEQDSSRYELALWRKVTQPISIAVMMLMALSFIFGPLRS 298 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + SF + F + + P L L ++ L+ +K Sbjct: 299 VTMGARILSGVIAGFSFYISSEFFGPLSLVYGLPPLFGALAPSLVFLAIALGLLGRK 355 >gi|313159015|gb|EFR58390.1| permease, YjgP/YjgQ family [Alistipes sp. HGB5] Length = 367 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 43/355 (12%), Positives = 113/355 (31%), Gaps = 11/355 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPTV 60 K + YIL ++ + I+ + + +++I+ + L +++ IP Sbjct: 9 KILDRYILGKFLATYFFAIAMIIIVVVLFDYVEKIDDFTELHAPLRDVIFDYYLNFIPFF 68 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + + + M TE++ + + G S L+ P A+++ Sbjct: 69 INQFSGLFTFIACIFFTSKMAYQTEIVAMLSGGMSFRRLMWPYFLGALIIGSLSLTLNLW 128 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKY-NPNNTLQGIFIVDSR 179 + P + I ++ + +++ +++ + I Y + + + + Sbjct: 129 LIPISQRHIVNFESQYIKRKQNNKFNRHIYRQIEPGTFAYIRGYNDASQQASFLALEHYY 188 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT--LQTESANSST 237 + A + + + R+ +F++ + E Sbjct: 189 SGTMTRSLEASDVKFNPETKCWTAPR-YTKREFDSLGVEKFEQFRNLDTLINLEVTELGE 247 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 I N++ L + + E H R L I LI + Sbjct: 248 INDLIQTMNITELNEFLDQQRAKGSDAINIIEVEKHARFAYPLSTFILTLIGVSL----- 302 Query: 298 LVRQRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 R+ + + I + + F+ + ++ P L ++L I +F+ Sbjct: 303 SSRKVRGGTGLHIGIGTGLCFSYILFNRFFEEFAKSGTLPPGLAVWLPNIIYLFI 357 >gi|320335464|ref|YP_004172175.1| permease YjgP/YjgQ family protein [Deinococcus maricopensis DSM 21211] gi|319756753|gb|ADV68510.1| permease YjgP/YjgQ family protein [Deinococcus maricopensis DSM 21211] Length = 379 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 53/385 (13%), Positives = 124/385 (32%), Gaps = 39/385 (10%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + L I + ++L+ G +P L Sbjct: 2 ILTRYVTRELLPPLLAGTALFTAILSFGYFFVSSQWL--KNVPPGLILQWIGAQVPDTLV 59 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 V P + + EL+ + + G S + +P +A L+++ + Sbjct: 60 KVLPMGVVLMVVVAFGRLATERELIAVQSGGISLGRVARPATVIAALVAVLAVWLSLWVA 119 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV--DSRD 180 P+ + L + L + + G+ + D + Sbjct: 120 PRLNVEARGLYWDTLTGGGLTTLSGRTTDLGGGLTLYLGGYDSATRRMTGVRVQQWDKDN 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKS--------PISKDISIMK------FK-- 224 + + +A+ G+ + ++ + L D V+R + +S D S ++ F Sbjct: 180 AELGTLVFARDGTFENNQ--LQLRDYAVYRVNFAAVRDLEAVSDDPSKLRSAIGDVFTAV 237 Query: 225 --------SYTLQTESANSSTIVLKAN----DQNLSFLLNPNPNNPNYRPELLETYRSEF 272 + TL T + T+ A+ D L P + + R + Sbjct: 238 NTPPNKDATLTLDTGLSRKETLARYADAIGADSEGWPQLITKLTAPGVKAADRQAARVDL 297 Query: 273 HKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN 332 +++L + ++ L ++ A + R + I+L I+ + F I Sbjct: 298 NRKLALPIGNLVLVLAALPFALRYG----RTLGTSLGIALLIAVAYYLLFFVGIAVANML 353 Query: 333 PYYIPI-LYLFLFCISSIFLLMIKK 356 P + ++L +++ L ++++ Sbjct: 354 PALPELGVWLANLVFAALGLTLLRR 378 >gi|229527564|ref|ZP_04416956.1| hypothetical protein VCG_000633 [Vibrio cholerae 12129(1)] gi|229335196|gb|EEO00681.1| hypothetical protein VCG_000633 [Vibrio cholerae 12129(1)] gi|327484987|gb|AEA79394.1| Predicted Permease [Vibrio cholerae LMA3894-4] Length = 356 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 55/359 (15%), Positives = 135/359 (37%), Gaps = 10/359 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I + + + V ++ +I+ ++++ V + L L IP + Sbjct: 3 KILDWYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGEGSYDLLQALLFVVLSIPRDV 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L ++ ++EL+++ G S++ + VL AI L I + + Sbjct: 63 EMFFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIIVTLLGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + + A A + ++ R +D +I I+K + Sbjct: 123 APQAQKMARDMRAFATSGGAIMSVRTGVWARDAND-FIFIAKVENEQLYGLNLWRFDENK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--STIV 239 + + +++ + + ++ D + R +IS Y +T A + + Sbjct: 182 KLSTVIFSEQVDYVANNE-WLMKDAVLTRL-VNDIEISKESLPEYRWRTSLAPDKLAVVT 239 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADKRA 297 +K + +L+ L + + + Y +++TQ + + L++ + R+ Sbjct: 240 VKPEELSLTGLSD-YVHYLKASEQDTSRYELALWRKVTQPISIAVMMLMALSFIFGPLRS 298 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + + + + F + F + + P L L ++ L+ +K Sbjct: 299 VTMGARILSGVIAGFT--FYISSEFFGPLSLVYGLPPLFGALAPSLVFLAIALGLLGRK 355 >gi|229521564|ref|ZP_04410982.1| hypothetical protein VIF_002100 [Vibrio cholerae TM 11079-80] gi|229341158|gb|EEO06162.1| hypothetical protein VIF_002100 [Vibrio cholerae TM 11079-80] Length = 356 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 55/357 (15%), Positives = 130/357 (36%), Gaps = 6/357 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I + + + V ++ +I+ ++++ V + L L IP + Sbjct: 3 KILDWYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGEGSYDLLQALLFVVLSIPRDV 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L ++ ++EL+++ G S++ + VL AI L I + + Sbjct: 63 EMFFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIIVTLLGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + + A A + ++ R +D +I I+K + Sbjct: 123 APQAQKMARDMRAFATSGGAIMSVRTGVWARDAND-FIFIAKVENEQLYGLNLWRFDENK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--STIV 239 + + +++ + + ++ D + R +IS Y +T A + + Sbjct: 182 KLSTVIFSEQVDYVANNE-WLMKDAVLTRL-VNDIEISKESLPEYRWRTSLAPDKLAVVT 239 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 +K + +L+ L + + + Y +++TQ + + L+++ Sbjct: 240 VKPEELSLTGLSD-YVHYLKASEQDSSRYELALWRKVTQPISIAVMMLMALSFIFGPLRS 298 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + SF + F + + P L L ++ L+ +K Sbjct: 299 VTMGARILSGVIAGFSFYISSEFFGPLSLVYGLPPLFGALAPSLVFLAIALGLLGRK 355 >gi|119944177|ref|YP_941857.1| permease YjgP/YjgQ family protein [Psychromonas ingrahamii 37] gi|119862781|gb|ABM02258.1| permease YjgP/YjgQ family protein [Psychromonas ingrahamii 37] Length = 354 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 45/350 (12%), Positives = 125/350 (35%), Gaps = 17/350 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + I + +S ++ ++ +I+ ++++ + + IP Sbjct: 1 MGILDRYIGKTIFAATFLSLFVLIGLSSIIKFVEQMGSIGVGSYDAWNAAYFVILKIPIE 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L S+ ++EL+++ G S++ + VL AI + I + + Sbjct: 61 LSVFFPMAALIGALIGLGSLANSSELVVMQAAGISKLRIAGAVLKTAIPMVIVVMVLTEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI-FIVDSR 179 + P + A+ + ++ + D ++ I + N N L + Sbjct: 121 VVPITDKEAYSMRYMAKRGEVQVSNQYGVWVKDAD-SFVSIERMNSKNELFHVQLYFFDE 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + A+ + G+V + + + + + +Y +T+ V Sbjct: 180 NLKLDHAILARKAAFKEGSWFF----GDVSQTNFLEDRTEVKRMSNYIWETKLTPKKLEV 235 Query: 240 L--KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + + ++ + N N + + + F ++ V+ L+S+ Sbjct: 236 ILGEPDKMSMRDIYNYIIYLEN-NEQDAKRFWLIFWRKAVLPFTIVVMMLLSVSFIFGG- 293 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCIS 347 + + + + FG+ GF++ + P+ + + + Sbjct: 294 -------LRSVTMGTRLIFGIAAGFTFYVSGELFGPFSLVFNWPPILGAL 336 >gi|311745737|ref|ZP_07719522.1| membrane protein [Algoriphagus sp. PR1] gi|126575180|gb|EAZ79530.1| membrane protein [Algoriphagus sp. PR1] Length = 357 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 51/358 (14%), Positives = 125/358 (34%), Gaps = 2/358 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + I++ +++ L ++ I V+ ++ + + ++K + Sbjct: 1 MKLLDKLIIKDFLKTYFFVVLMLILIVLVLDFTEKNDSYIRNDVPSGEIMKYMINYGLYL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++TP + + + M TE++ I ++G S +++P +F A+L+ F+ Sbjct: 61 NNLLTPITVFISVIFITSKMAGRTEIIAILSSGVSFPRMLRPFIFAAMLIGGVSFLLNGW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF-IVDSR 179 + P + + + T + + N+ ++ D Y +S++ F + R Sbjct: 121 VLPVATEGVTKFKLT-YIDKTRTASDPNVHIKVGTDSYAYLSRFYKTGNTGYHFTLETIR 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 D + + D + L + + +D S+ + TL + Sbjct: 180 DGRLINKLSSDRIQWDTAKNVWTLKNWRFRELNEFGEDYSVGEEMDTTLSITPDDFDLPE 239 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L L + + + Y+ E + R +I I ++ + K++ Sbjct: 240 NHHETLKLPELSRQIRVLEDRGADNVAFYKIERYVRFMSPFAAIILTFIGVIMSAKKSRG 299 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 +I F+ I +F P + L +F ++ + L + Sbjct: 300 GSGFQIAMGFLLAFIYILLFILSRTFAENGASYPIFAVWLPNIVFGLTGLVLYKTVPR 357 >gi|108563456|ref|YP_627772.1| hypothetical protein HPAG1_1031 [Helicobacter pylori HPAG1] gi|107837229|gb|ABF85098.1| conserved hypothetical integral membrane protein [Helicobacter pylori HPAG1] Length = 345 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 63/359 (17%), Positives = 136/359 (37%), Gaps = 19/359 (5%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + Y+ + + F L + FI+ ++ ++ ++ S L+++ Y +P + Sbjct: 2 IKHYLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFF 61 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 + P F L+ ++ + ELL+ + G S T+ K + L++L+S L + I+ P Sbjct: 62 ILPITFFAACALGLSRLSYDHELLVFFSLGVSPKTMTKAFVPLSLLVSAILLVFSLILIP 121 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 +S + + + F + D + + K NN+ + + ++ Sbjct: 122 TSKSAYYGFLRQ-KKDKIDINIRAGEFGQKLGDWLVYVDK-AENNSYDNLVLFSNKSLSQ 179 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL--QTESANSSTIVLK 241 AQ G+I+ LN H + + F+ L + +S NS+ Sbjct: 180 ESFILAQKGNINNQNGVFELNLYSGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYL 239 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 L + N N + +R +Q + +F L S+ + Sbjct: 240 QGTDYLGYWKKAFGKNANKNQK----------RRFSQAILVSLFPLASVFLIPLFGIANP 289 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL--MIKKKY 358 R K + + + + GV+ ++H I + + + + F++ S L I K+Y Sbjct: 290 RFKTNWSYFYVLGAVGVY---FLMVHVISTDLFLMTFFFPFIWAFGSYLLFRKFILKRY 345 >gi|260596297|ref|YP_003208868.1| lipopolysaccharide ABC transporter permease [Cronobacter turicensis z3032] gi|260215474|emb|CBA27593.1| Lipopolysaccharide export system permease protein lptG [Cronobacter turicensis z3032] Length = 359 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 59/358 (16%), Positives = 131/358 (36%), Gaps = 5/358 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI R I + +M+ +V ++ +I+ + ++ + + + +P + Sbjct: 4 SVLDRYIGRTIFNTIMMTLFMLVSLSGIIKFVDQLKKTGEGSYTALGAGTYTLLSVPKDI 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L + + +EL+++ +G +R+ + V+ AI L IF + Sbjct: 64 QIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVAASVMKTAIPLVIFTMAIGEWV 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + L A+ + ++ ++ + + ++ I + N L GI I D Sbjct: 124 APQGEQMARNLRAQQMYGGSLLSTQQGMWAKDGSN-FVYIERVKGENELGGISIYAFNDK 182 Query: 182 QT-HKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + YA S D + + L+ E + K+P S ++ + Sbjct: 183 RRLESVRYAASAKFDAEHKLWRLSQVDESNLKNPQQITGSQTLTGTWKTNLTPDKLGVVA 242 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L + ++S L N + Y+ ++ Q L + L+++ Sbjct: 243 LDPDALSISGLRN-YVTYLKASGQDASRYQLNMWSKILQPLSVAVMMLMALSFIFGPLRS 301 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP-ILYLFLFCISSIFLLMIKK 356 IS F V + + P I +L F + S++LLM + Sbjct: 302 VPMGVRVVTGISFGFIFYVLDQIFGPLSLVYGIPPIIGALLPSASFFLISLWLLMKRA 359 >gi|52842835|ref|YP_096634.1| permease [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629946|gb|AAU28687.1| permease [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 356 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 48/359 (13%), Positives = 115/359 (32%), Gaps = 9/359 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI + + + + L +V + I + +I+ + + + +P + Sbjct: 4 KILDRYIAKTVLSAIGLVTLMLVGLQIFILFVNQIDDLGRADYGIVQAGVFVLLQMPYQV 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L + ++EL+++ G S + VL ++++ + + I Sbjct: 64 YLFFPIASLLGCLVGLGVLANHSELVVMRAAGISIGQITGAVLKASLIVILLITSLGETI 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + A ++ R +D ++ I+ NTL+ ++ R Sbjct: 124 VPVMAHYANEYKVSALTGGQALLTPRGVWVRNGND-FVSIASVTHENTLR--YVNQFRFD 180 Query: 182 QTHKIYYAQS-GSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--STI 238 H + A+ + + I D + + F + Sbjct: 181 NQHNLKLARQISEVKYVNNSWIAYDVKQTEFAEDHTKA--HHFDTLPWDVPVKPEILKIT 238 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 ++ L L N + + Y+ F +R+TQ L ++ +++I Sbjct: 239 GTNPDEMTLHEL-NRYLREQQRNHQNVANYKFAFFQRITQPLNTMVMMILAIPFIFGPLR 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + F + F + + Q P + L LM + + Sbjct: 298 SSTMGSKLLVGAMVGFGFHILNRFFGPVSTVFQWPPELAAFSPTLIFSLIGIYLMRRVR 356 >gi|262367136|gb|ACY63693.1| membrane protein [Yersinia pestis D182038] Length = 358 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 54/364 (14%), Positives = 130/364 (35%), Gaps = 17/364 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI R I + LM+ L +V ++ +I+ + ++ V S + IP + Sbjct: 3 GVLDRYIGRTILNTILMTLLMLVSLSGIIKFVDQLRKVGQGDYSAASAGMYTILSIPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ +EL+++ +G +R+ + V+ AI L + + Sbjct: 63 AVFFPMAALLGALLGLGTLASRSELVVMQASGFTRMQIAASVMKTAIPLVLLTMAIGEWV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI-VDSRD 180 P+ T + + + + L+ + D +I I + + + L G+ I ++ Sbjct: 123 APQGEQTARNFRTQQMYGGSLLSTQSGLWAKDGSD-FIYIQRVSGESELTGVNIYHFDKE 181 Query: 181 TQTHKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + YA + + + D + L+ E +P S + + Sbjct: 182 DRLLSVRYAATATYEKDNKTWRLSQVDESDLSNPTQVTGSQTLTGEWKTNLTPEKLGVVA 241 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + + ++S L + + Y ++ + L+++ Sbjct: 242 MDPDSLSISGL-HDYSKYLQQSGQESNRYELSMWSKVFAPFSVAVMMLMALSFIFGPL-- 298 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-------NPYYIPILYLFLFCISSIFLL 352 + P+ + + + F + H + P +L LF + SI LL Sbjct: 299 ----RSVPMGVRVVTGIFFGFVFYVLDHVFGRLSLVYGIPPMLGALLPSMLFLLISICLL 354 Query: 353 MIKK 356 + ++ Sbjct: 355 LKRR 358 >gi|165936803|ref|ZP_02225370.1| putative permease [Yersinia pestis biovar Orientalis str. IP275] gi|167420748|ref|ZP_02312501.1| putative permease [Yersinia pestis biovar Orientalis str. MG05-1020] gi|165915452|gb|EDR34062.1| putative permease [Yersinia pestis biovar Orientalis str. IP275] gi|166961554|gb|EDR57575.1| putative permease [Yersinia pestis biovar Orientalis str. MG05-1020] Length = 358 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 56/359 (15%), Positives = 130/359 (36%), Gaps = 7/359 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI R I + LM+ L +V ++ +I+ + ++ V S + IP + Sbjct: 3 GVLDRYIGRTILNTILMTLLMLVSLSGIIKFVDQLRKVGQGDYSAASAGMYTILSIPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ +EL+++ +G +R+ + V+ AI L + + Sbjct: 63 AVFFPMAALLGALLGLGTLASRSELVVMQASGFTRMQIAASVMKTAIPLVLLTMAIGEWV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI-VDSRD 180 P+ T + + + + L+ + D +I I + + + L G+ I ++ Sbjct: 123 APQGEQTARNFRTQQMYGGSLLSTQSGLWAKDGSD-FIYIQRVSGESELTGVNIYHFDKE 181 Query: 181 TQTHKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + YA + + + D + L+ E +P S + S + Sbjct: 182 DRLLSVRYAATATYEKDNKTWRLSQVDESDLSNPTQVTGSQTLTGEWKTNLTSEKLGVVA 241 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADKRA 297 + + ++S L + + Y ++ + L++ + R+ Sbjct: 242 MDPDSLSISGL-HDYSKYLQQSGQESNRYELSMWSKVFAPFSVAVMMLMALSFIFGPLRS 300 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + + IF F + P +L LF + SI LL+ ++ Sbjct: 301 VPMGVRVVTGIFFGFVFYVLDQV-FGRLSLVYGIPPMLGALLPSMLFLLISICLLLKRR 358 >gi|54298618|ref|YP_124987.1| hypothetical protein lpp2682 [Legionella pneumophila str. Paris] gi|148358636|ref|YP_001249843.1| permease [Legionella pneumophila str. Corby] gi|296108274|ref|YP_003619975.1| permease [Legionella pneumophila 2300/99 Alcoy] gi|53752403|emb|CAH13835.1| hypothetical protein lpp2682 [Legionella pneumophila str. Paris] gi|148280409|gb|ABQ54497.1| permease [Legionella pneumophila str. Corby] gi|295650176|gb|ADG26023.1| permease [Legionella pneumophila 2300/99 Alcoy] Length = 356 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 48/359 (13%), Positives = 115/359 (32%), Gaps = 9/359 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI + + + + L +V + I + +I+ + + + +P + Sbjct: 4 KILDRYIAKTVLSAIGLVTLMLVGLQIFILFVNQIDDLGRADYGIVQAGVFVLLQMPYQV 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L + ++EL+++ G S + VL ++++ + + I Sbjct: 64 YLFFPIASLLGCLVGLGVLANHSELVVMRAAGISIGQITGAVLKASLIVILLITSLGETI 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + A ++ R +D ++ I+ NTL+ ++ R Sbjct: 124 VPVMAHYANEYKVSALTGGQALLTPRGVWVRNGND-FVSIASVTHENTLR--YVNQFRFD 180 Query: 182 QTHKIYYAQS-GSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--STI 238 H + A+ + + I D + + F + Sbjct: 181 NQHNLKLARQISEVKYVNNSWIAYDVKQTEFAEDHTKA--YHFDTLPWDVPVKPEILKIT 238 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 ++ L L N + + Y+ F +R+TQ L ++ +++I Sbjct: 239 GTNPDEMTLHEL-NRYLREQQRNHQNVSNYKFAFFQRITQPLNTMVMMILAIPFIFGPLR 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + F + F + + Q P + L LM + + Sbjct: 298 SSTMGSKLLVGAMVGFGFHILNRFFGPVSTVFQWPPELAAFSPTLIFSLIGIYLMRRVR 356 >gi|89075942|ref|ZP_01162317.1| putative permease [Photobacterium sp. SKA34] gi|89048383|gb|EAR53961.1| putative permease [Photobacterium sp. SKA34] Length = 338 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 44/319 (13%), Positives = 118/319 (36%), Gaps = 7/319 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I +F ++ +V ++ +I+ ++++ V + L L +P + Sbjct: 3 KILDWYIGRTIIATFSLTLSTLVGLSAIIKYVEQLRKVGQGSYDLLKALYFVLLSMPQDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++ + L A+ + I + + Sbjct: 63 IMFFPMAVLLGALIGLGMLASSSELVVMQAAGFSKLDIGLSTLKTAVPMMIVVVLLGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + ++ + + + ++ + D+ +I + + + N + + I + Sbjct: 123 APQAQKMAREYRSAWIYGGSVIAAQSGVWAKN-DNSFIYMGRVHDLNKVDVVNIWQFDNK 181 Query: 182 QT-HKIYYAQSGSIDLDRQAIILNDGEV-HRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + A+ S D ++D + S + K + + + Sbjct: 182 GQLEDVTSAKRASYDKA-TGWTMHDVTITDMIGSSQLTNSQIASKHWETTLTPDKLAVVT 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADKRA 297 +K + +LS L + N + Y F ++ Q + + L++ V R+ Sbjct: 241 VKPEELSLSGLYH-YVNYLKETKQDASRYDLAFWRKALQPISIAVMMLLALSFVFGPLRS 299 Query: 298 LVRQRKKIHPIFISLSISF 316 + + + + + Sbjct: 300 VTMGARVLSGVIFGFAFYI 318 >gi|332749215|gb|EGJ79636.1| hypothetical protein SF434370_4578 [Shigella flexneri 4343-70] gi|333009229|gb|EGK28685.1| hypothetical protein SFK218_0005 [Shigella flexneri K-218] Length = 360 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 54/361 (14%), Positives = 128/361 (35%), Gaps = 11/361 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + + I++ ++ + + + L + +P Sbjct: 5 GVLDRYIGKTI---FTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVP 61 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L + + +EL+++ +G +R+ + V+ AI L + + Sbjct: 62 KDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMVIG 121 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-D 177 + P+ + A+A + ++ L+ + ++ ++ I + + L GI I Sbjct: 122 EWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNN-FVYIERVKGDEVLGGISIYAF 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + + YA + D + + L+ E +P S ++ Sbjct: 181 NENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTDLTPDKLG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + ++S L N + Y+ ++ Q L + L+++ Sbjct: 241 VVALDPDALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 IS F V F + P +L F + S++LLM K Sbjct: 300 LRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRK 359 Query: 356 K 356 Sbjct: 360 S 360 >gi|315617676|gb|EFU98282.1| conserved hypothetical protein [Escherichia coli 3431] Length = 360 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 56/361 (15%), Positives = 127/361 (35%), Gaps = 11/361 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + + I++ ++ + + + L + +P Sbjct: 5 GVLDRYIGKTI---FTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVP 61 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L + + +EL+++ +G +R+ + V+ AI L + Sbjct: 62 KDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAMG 121 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-D 177 I P+ + A+A + ++ L+ + ++ ++ I + + L GI I Sbjct: 122 EWIAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNN-FVYIERVKGDEELGGISIYAF 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + + YA S D + + L+ E +P S ++ Sbjct: 181 NENRRLQSVRYAASAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + ++S L N + Y+ ++ Q L + L+++ Sbjct: 241 VVALDPDALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 IS F V F + P +L F + S++LLM K Sbjct: 300 LRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFVISLWLLMRK 359 Query: 356 K 356 Sbjct: 360 S 360 >gi|193069794|ref|ZP_03050744.1| putative permease [Escherichia coli E110019] gi|192956848|gb|EDV87301.1| putative permease [Escherichia coli E110019] Length = 360 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 54/361 (14%), Positives = 127/361 (35%), Gaps = 11/361 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + + I++ ++ + + + L + +P Sbjct: 5 GVLDRYIGKTI---FTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVP 61 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L + + +EL+++ +G +R+ + V+ AI L + Sbjct: 62 KDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIG 121 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-D 177 + P+ + A+A + ++ L+ + ++ ++ I + + L GI I Sbjct: 122 EWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNN-FVYIERVKGDEELGGISIYAF 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + + YA + D + + L+ E +P S ++ Sbjct: 181 NENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + ++S L N + Y+ ++ Q L + L+++ Sbjct: 241 VVALDPDALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSAAVMMLMALSFIFGP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 IS F V F + P +L F + S++LLM K Sbjct: 300 LRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRK 359 Query: 356 K 356 Sbjct: 360 S 360 >gi|147674275|ref|YP_001217997.1| hypothetical protein VC0395_A2081 [Vibrio cholerae O395] gi|153215714|ref|ZP_01950095.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|153831207|ref|ZP_01983874.1| putative membrane protein [Vibrio cholerae 623-39] gi|229513426|ref|ZP_04402890.1| hypothetical protein VCB_001071 [Vibrio cholerae TMA 21] gi|229524482|ref|ZP_04413887.1| hypothetical protein VCA_002077 [Vibrio cholerae bv. albensis VL426] gi|254291417|ref|ZP_04962209.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|297581346|ref|ZP_06943269.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|124114632|gb|EAY33452.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|146316158|gb|ABQ20697.1| putative membrane protein [Vibrio cholerae O395] gi|148873314|gb|EDL71449.1| putative membrane protein [Vibrio cholerae 623-39] gi|150422607|gb|EDN14562.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|227014389|gb|ACP10599.1| putative Inner membrane protein [Vibrio cholerae O395] gi|229338063|gb|EEO03080.1| hypothetical protein VCA_002077 [Vibrio cholerae bv. albensis VL426] gi|229349303|gb|EEO14259.1| hypothetical protein VCB_001071 [Vibrio cholerae TMA 21] gi|297534184|gb|EFH73022.1| conserved hypothetical protein [Vibrio cholerae RC385] Length = 356 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 55/359 (15%), Positives = 135/359 (37%), Gaps = 10/359 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I + + + V ++ +I+ ++++ V + L L IP + Sbjct: 3 KILDWYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGEGSYDLLQALLFVVLSIPRDV 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L ++ ++EL+++ G S++ + VL AI L I + + Sbjct: 63 EMFFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIIVTLLGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + + A A + ++ R +D +I I+K + Sbjct: 123 APQAQKMARDMRAFATSGGAIMSVRTGVWARDAND-FIFIAKVENEQLYGLNLWRFDENK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--STIV 239 + + +++ + + ++ D + R +IS Y +T A + + Sbjct: 182 KLSTVIFSEQVDYVANNE-WLMKDAVLTRL-VNDIEISKESLPEYRWRTSLAPDKLAVVT 239 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADKRA 297 +K + +L+ L + + + Y +++TQ + + L++ + R+ Sbjct: 240 VKPEELSLTGLSD-YVHYLKASEQDSSRYELALWRKVTQPISIAVMMLMALSFIFGPLRS 298 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + + + + F + F + + P L L ++ L+ +K Sbjct: 299 VTMGARILSGVIAGFT--FYISSEFFGPLSLVYGLPPLFGALAPSLVFLAIALGLLGRK 355 >gi|317011287|gb|ADU85034.1| hypothetical protein HPSA_05295 [Helicobacter pylori SouthAfrica7] Length = 345 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 62/357 (17%), Positives = 135/357 (37%), Gaps = 19/357 (5%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ + + F L + FI+ ++ ++ ++ S L+++ Y +P + + Sbjct: 4 HYLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFIL 63 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P F L+ ++ + ELL+ + G S + K + L+IL+S L + I+ P Sbjct: 64 PITFFAACALGLSRLSYDHELLVFFSLGVSPKKMAKAFVPLSILVSAILLVFSLILIPTS 123 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHK 185 +S + + + F + D + + K NN+ + + ++ Sbjct: 124 KSAYYGFLRQ-KKDKIDINIRAGEFGQKLGDWLVYVDK-AENNSYDNLVLFSNKSLSQES 181 Query: 186 IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL--QTESANSSTIVLKAN 243 AQ G+I+ LN H + + F+ L + +S NS+ Sbjct: 182 FILAQKGNINNKNGVFELNLYSGHAYFTQGDKMRKIDFEELHLRNKLKSFNSNDAAYLQG 241 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 L + N N + +R +Q + +F L S+ + R Sbjct: 242 TDYLGYWKKAFGKNANKNQK----------RRFSQAILVSLFPLASVFLIPLFGIANPRF 291 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL--MIKKKY 358 K + + + + G++ ++H I + + + + F++ +S L I K+Y Sbjct: 292 KTNWSYFYVLGAVGIY---FLMVHVISTDLFLMTFFFPFIWAFASYLLFRKFILKRY 345 >gi|170767103|ref|ZP_02901556.1| putative permease [Escherichia albertii TW07627] gi|170124541|gb|EDS93472.1| putative permease [Escherichia albertii TW07627] Length = 360 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 56/361 (15%), Positives = 127/361 (35%), Gaps = 11/361 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + + I++ ++ + + + L + +P Sbjct: 5 GVLDRYIGKTI---FTTIMMMLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVP 61 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L + + +EL+++ +G +R+ + V+ AI L + Sbjct: 62 KDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAMG 121 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-D 177 I P+ + A+A + ++ L+ + ++ ++ I + + L GI I Sbjct: 122 EWIAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNN-FVYIERVKGDEELGGISIYAF 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + + YA S D + + L+ E +P S ++ Sbjct: 181 NENRRLQSVRYAASAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + ++S L N + Y+ ++ Q L + L+++ Sbjct: 241 VVALDPDALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 IS F V F + P +L F + S++LLM K Sbjct: 300 LRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFVISLWLLMRK 359 Query: 356 K 356 Sbjct: 360 S 360 >gi|109947019|ref|YP_664247.1| hypothetical protein Hac_0413 [Helicobacter acinonychis str. Sheeba] gi|109714240|emb|CAJ99248.1| conserved hypothetical protein [Helicobacter acinonychis str. Sheeba] Length = 356 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 59/357 (16%), Positives = 137/357 (38%), Gaps = 19/357 (5%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ + + F L + FI+ ++ ++ ++ S L+++ Y +P + + Sbjct: 15 RYLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFIL 74 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P F L+ ++ + ELL+ + G S + K + L+IL+S L + ++ P Sbjct: 75 PITFFAACALGLSRLSYDHELLVFFSLGVSPKKMTKAFVPLSILVSAILLVFSLVLIPTS 134 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHK 185 +S + + + F + D + + K NN+ + + ++ Sbjct: 135 KSAYYGFLHQ-KKDKIDINIRVGEFGQKLGDWLVYVDK-AENNSYDNLVLFSNKSLSQES 192 Query: 186 IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL--QTESANSSTIVLKAN 243 AQ G+I+ LN + H + + F+ L + +S N++ Sbjct: 193 FILAQKGNINNQNGVFELNLYKGHAYFTQGDKMRKIDFEELHLRNKLKSFNANDASYLQG 252 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 L + + N + +R +Q + +F L S+ + R Sbjct: 253 TDYLGYWKRAFGKSANKSQK----------RRFSQAILVSLFPLASVFLIPLFGIANPRF 302 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL--MIKKKY 358 K + + + + G++ ++H I + + + ++ F++ +S L I K+Y Sbjct: 303 KTNWSYFYVLGAVGIY---FLMVHVISTDLFLMTFIFPFIWAFASYLLFRKFILKRY 356 >gi|298206762|ref|YP_003714941.1| hypothetical protein CA2559_00860 [Croceibacter atlanticus HTCC2559] gi|83849393|gb|EAP87261.1| hypothetical protein CA2559_00860 [Croceibacter atlanticus HTCC2559] Length = 359 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 52/363 (14%), Positives = 129/363 (35%), Gaps = 10/363 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL+ +F+ L + I + + ++I+ + ++ + + Sbjct: 1 MKILDWYILKRYLGTFVTLLLLFIPIGITVNLAEKIDKILANDVPFIEVAEYYLNFTIYF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + + + NTE++ ++G S ++P L A ++ + I Sbjct: 61 ANLLFPLFLFLSVIWFTSKLANNTEIIAFLSSGVSFYRFLRPYLIGATIVCLLALIMGMY 120 Query: 121 IEPKCRSTIKQLSAK-AQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDS 178 + P + + +N++ ++++D I + +NP+ + + Sbjct: 121 LAPSASKGFNEFKYTYLKSGGDNQQETKNVYRQINEDEVIYATNFNPSRQSALNFTLEHF 180 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 +D A + + L + + + L E + Sbjct: 181 KDNVLEYKISASRLQYNKEDTTYTLTNFNKRLVGARGDSLIHYRKLDTILPFEFDELTPN 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 A N + L + L Y +KR + + I +I++ A+ Sbjct: 241 SYVAETLNFNELNKFIEDEKRRGSGNLNRYLVVAYKRWSTPVSAYILTIIAVAV---SAM 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL----FCISSIFLLMI 354 R+ + I ++++F + + EQ+ + P++ ++ F I +I+LL Sbjct: 298 KRRGGMGINLAIGIAVAFSFVFLDKVLGTIAEQS-DFSPLVAVWFPNVSFGILAIYLLYN 356 Query: 355 KKK 357 K+ Sbjct: 357 AKR 359 >gi|303258295|ref|ZP_07344302.1| permease YjgP/YjgQ [Burkholderiales bacterium 1_1_47] gi|302859048|gb|EFL82132.1| permease YjgP/YjgQ [Burkholderiales bacterium 1_1_47] Length = 378 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 52/388 (13%), Positives = 131/388 (33%), Gaps = 42/388 (10%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTE-----SLNILLKISGY 55 MK I I +S L L +V + +L+ S S+ ++ Sbjct: 1 MKIVSRMIFAQIMKSSLFVLLTLVALF------AFFDLIGQSGNIGTSYSMGQAFLLTAL 54 Query: 56 LIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLF 115 ++PT V P + + L+ + ++ ++ +G +L I+L I + Sbjct: 55 ILPTRCYEVLPIAVMLGSIFTLSRLASTSQFTVLRVSGIGPWRFCGMLLMPGIVLVICAY 114 Query: 116 ISENIIEPKCRSTIKQLSAKAQ----------LALTFSYLEENLFFRLDDDLYIKISKYN 165 + N++ P + K+ + ++ N ++ + + Sbjct: 115 LLGNLVAPPAQRLAKEFKLDISGSAFTGKELDSGIWVRDVQRNEAGEPKKISFVNVQRLR 174 Query: 166 PNNTLQG--IFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDG---EVHRKSPISKDISI 220 P +++ D D I A+SG+ +++ +L+D V S++ + Sbjct: 175 PGEAAYDWVVYVFDRPD-HLTSIVTAKSGTY-SEQEGWVLHDVVEETVPTLPKESREQTQ 232 Query: 221 MKFKSYTL-------QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFH 273 + + + + +++K D +L L + + + + + F Sbjct: 233 ARVERKVMKSMVWGKSLDGNIFGLLMIKPEDMSLQEL-HYYIEYLKENGQTYKRFDTAFW 291 Query: 274 KRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWG--FSYIIHKIEQ 331 + L ++ L+S+ A R IF + I + + ++ Sbjct: 292 SKAFYPLAILVMLLLSMPFA--YQNARAGGMAIKIFCGIMIGIFYYALNNLFAFMSALDS 349 Query: 332 NPYYIPILY--LFLFCISSIFLLMIKKK 357 P I + + + + I + ++++ Sbjct: 350 VPSIISAILPSVMMTLAAIIAMWYVERR 377 >gi|330504704|ref|YP_004381573.1| permease YjgP/YjgQ family protein [Pseudomonas mendocina NK-01] gi|328918990|gb|AEB59821.1| permease YjgP/YjgQ family protein [Pseudomonas mendocina NK-01] Length = 354 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 45/360 (12%), Positives = 122/360 (33%), Gaps = 11/360 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + L I+ +A + + + ++ L L P Sbjct: 1 MAKLDRYIGTQVFFAILAVLGIILGLALLFAFIDELGDLNKGDYGLGQALWYVLLTAPRR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ N+EL I+ G S ++ V+ ++L + + Sbjct: 61 AYEMLPMAALIGCLIGLGTLASNSELTIMRAAGVSIGRIVWAVMKPMLVLMLAGILIGEY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A AQ + ++ Y+ I+ P L G+ D Sbjct: 121 VAPLTENQAQADRALAQGGGAAQSSKRGMW-HRQGQEYVHINAVQPGGVLLGVTRYRFDD 179 Query: 181 TQTHKIY-YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + +A+ + +L++ + ++ + + + ++ T+V Sbjct: 180 ERRLLSASFARRAEYRDNH--WMLSNVKTTLLHEDHSEVVNQREERWDIELNPELLGTVV 237 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLF--PVIFGLISIVAADKRA 297 ++ +++ L + + + Y F ++ Q L ++ IS + R+ Sbjct: 238 MEPEALSVTGL-WQYIHYLSEQGLNNARYWLAFWTKVLQPLVTGALVLMAISFIFGPLRS 296 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ +F + + F + + + L I ++ + + ++ Sbjct: 297 VTLGQR----VFTGVLVGFIFRIAQDLLGPSSLVFGFSPLLAVLVPAGICALAGVWLLRR 352 >gi|262363206|gb|ACY59927.1| membrane protein [Yersinia pestis D106004] Length = 225 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 35/216 (16%), Positives = 79/216 (36%), Gaps = 7/216 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFSQKLVRILGAAVDGEIPTNVVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ +++ G + +LI L LA+ S I+ + Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMNACGMGKKSLIMAALILALFTSGLAAINTIWLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLY-IKISKYNPNNTLQGIFIVDSRDT 181 P + A+ + + L F +D + I +F+ R Sbjct: 122 PWSSKHQDVVLNDAKANPSLAALGGGQFKSSNDGNSALFIGNV-AGKEFNRVFLAQLRPN 180 Query: 182 QT--HKIYYAQSGSIDL---DRQAIILNDGEVHRKS 212 + A SG + Q +ILN G + + Sbjct: 181 GNQRPSVVVADSGHMSELPDGSQMVILNKGTRYEGT 216 >gi|208434987|ref|YP_002266653.1| hypothetical protein HPG27_1034 [Helicobacter pylori G27] gi|298735907|ref|YP_003728432.1| hypothetical protein HPB8_411 [Helicobacter pylori B8] gi|208432916|gb|ACI27787.1| hypothetical protein HPG27_1034 [Helicobacter pylori G27] gi|298355096|emb|CBI65968.1| conserved hypothetical protein [Helicobacter pylori B8] gi|317012864|gb|ADU83472.1| hypothetical protein HPLT_05405 [Helicobacter pylori Lithuania75] Length = 345 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 63/359 (17%), Positives = 137/359 (38%), Gaps = 19/359 (5%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + Y+ + + F L + FI+ ++ ++ ++ S L+++ Y +P + Sbjct: 2 IKHYLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFF 61 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 + P F L+ ++ + ELL+ + G S T+ K + L++L+S L + I+ P Sbjct: 62 ILPITFFAACALGLSRLSYDHELLVFFSLGVSPKTMTKAFVPLSLLVSAILLVFSLILIP 121 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 +S + + + F + D + + K NN+ + + ++ Sbjct: 122 TSKSAYYGFLRQ-KKDKIDINIRAGEFGQKLGDWLVYVDK-AENNSYDNLVLFSNKSLSQ 179 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL--QTESANSSTIVLK 241 AQ G+I+ LN + H + + F+ L + +S NS+ Sbjct: 180 ESFILAQKGNINNQNGVFELNLYKGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYL 239 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 L + N N + +R +Q + +F L S+ + Sbjct: 240 QGTDYLGYWKKAFGKNANKNQK----------RRFSQAILVSLFPLASVFLIPLFGIANP 289 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL--MIKKKY 358 R K + + + + GV+ ++H I + + + + F++ S L I K+Y Sbjct: 290 RFKTNWSYFYVLGAVGVY---FLMVHVISTDLFLMTFFFPFIWAFGSYLLFRKFILKRY 345 >gi|317009699|gb|ADU80279.1| hypothetical protein HPIN_05385 [Helicobacter pylori India7] Length = 345 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 63/359 (17%), Positives = 137/359 (38%), Gaps = 19/359 (5%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + Y+ + + F L + FI+ ++ ++ ++ S L+++ Y +P + Sbjct: 2 IKHYLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFF 61 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 + P F L+ ++ + ELL+ + G S T+ K + L++L+S L + I+ P Sbjct: 62 ILPITFFAACALGLSRLSYDHELLVFFSLGVSPKTMTKAFVPLSLLVSAILLVFSLILIP 121 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 +S + + + F + D + + K NN+ + + ++ Sbjct: 122 TSKSAYYGFLRQ-KKDKIDINIRAGEFGQKLGDWLVYVDK-AENNSYDNLVLFSNKSLSQ 179 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL--QTESANSSTIVLK 241 AQ G+I+ LN H + + F+ L + +S NS+ Sbjct: 180 ESFILAQKGNINNQNGVFELNLYSGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYL 239 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 L + N N + +R +Q + +F L S+ + Sbjct: 240 QGTDYLGYWKKAFGKNANKNQK----------RRFSQAVLVSLFPLASVFLIPLFGIANP 289 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL--MIKKKY 358 R K + + + + GV+ ++H I + + + + F++ +S L I K+Y Sbjct: 290 RFKTNWSYFYVLGAVGVY---FLMVHVISTDLFLMTFFFPFIWAFASYLLFRKFILKRY 345 >gi|308183196|ref|YP_003927323.1| hypothetical protein HPPC_05300 [Helicobacter pylori PeCan4] gi|308065381|gb|ADO07273.1| hypothetical protein HPPC_05300 [Helicobacter pylori PeCan4] Length = 345 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 63/359 (17%), Positives = 136/359 (37%), Gaps = 19/359 (5%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + Y+ + + F L + FI+ ++ ++ ++ S L+++ Y +P + Sbjct: 2 IKHYLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFF 61 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 + P F L+ ++ + ELL+ + G S + K + L++L+S L + I+ P Sbjct: 62 ILPITFFAACALGLSRLSYDHELLVFFSLGVSPKKMTKAFVPLSLLVSAILLVFSLILIP 121 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 +ST + + + F + D + + K NN+ + + ++ Sbjct: 122 TSKSTYYGFLRQ-KKDKIDINIRAGEFGQKLGDWLVYVDK-AENNSYDNLVLFSNKSLSQ 179 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL--QTESANSSTIVLK 241 AQ G+I+ LN H + + F+ L + +S NS+ Sbjct: 180 ESFILAQKGNINNQNGVFELNLYNGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYL 239 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 L + N N + +R +Q + +F L S+ + Sbjct: 240 QGTDYLGYWKKAFGKNANKNQK----------RRFSQAILVSLFPLASVFLIPLFGIANP 289 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL--MIKKKY 358 R K + + + + GV+ ++H I + + + + F++ S L I K+Y Sbjct: 290 RFKTNWSYFYVLGAVGVY---FLMVHVISTDLFLMTFFFPFIWAFGSYLLFRKFILKRY 345 >gi|254779645|ref|YP_003057751.1| hypothetical protein HELPY_1062 [Helicobacter pylori B38] gi|254001557|emb|CAX29575.1| Conserved hypothetical protein; putative membrane protein; putative signal peptide [Helicobacter pylori B38] Length = 345 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 63/359 (17%), Positives = 138/359 (38%), Gaps = 19/359 (5%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + Y+ + + F L + FI+ ++ ++ ++ S L+++ Y +P + Sbjct: 2 IKHYLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFF 61 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 + P F L+ ++ + ELL+ + G S T+ K + L++L+S L + I+ P Sbjct: 62 ILPITFFAACALGLSRLSYDHELLVFFSLGVSPKTMTKAFVPLSLLVSAILLVFSLILIP 121 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 +S + + + F + D + + K NN+ + + ++ Sbjct: 122 TSKSAYYGFLRQ-KKDKIDINIRAGEFGQKLGDWLVYVDK-AENNSYDNLVLFSNKSLSQ 179 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL--QTESANSSTIVLK 241 AQ G+I+ LN + H + + F+ L + +S NS+ Sbjct: 180 ESFILAQKGNINNQNGVFELNLYKGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYL 239 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 L + N N + +R +Q + +F L S+ + Sbjct: 240 QGTDYLGYWKKAFGKNANKNQK----------RRFSQAILVSLFPLASVFLIPLFGIANP 289 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL--MIKKKY 358 R K + + + + GV+ ++H I + + + + F++ +S L I K+Y Sbjct: 290 RFKTNWSYFYVLGAVGVY---FLMVHVISTDLFLMTFFFPFIWAFASYLLFRKFILKRY 345 >gi|146283385|ref|YP_001173538.1| permease [Pseudomonas stutzeri A1501] gi|145571590|gb|ABP80696.1| predicted permease [Pseudomonas stutzeri A1501] Length = 353 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 55/359 (15%), Positives = 125/359 (34%), Gaps = 10/359 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + LM IV +A + + + V S L L+ P Sbjct: 1 MVKLDRYIGIHVFLAILMVLGIIVGLALLFAFIDELGDVQGS-YGLGDALQYVLLTSPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L ++ ++EL I+ G S ++ V+ ++L + + Sbjct: 60 LYEMLPMAALIGCLIGLGTLASSSELTIMRAAGVSLGRIVLSVMKPMLVLLVAGILIGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF-IVDSR 179 + P + + AQ A + L+ ++ ++ ++ P L G+ Sbjct: 120 VAPLSEDIAQARRSLAQGAGEAQSSKRGLW-HRQENEFVHVNAVQPGGVLVGVTRYRFDE 178 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + +A+ S D L + ++ + + +Q T+V Sbjct: 179 ERRLLSSSFARRASYQGDH--WRLENIATTHFRGDHTEVMRAPEERWDVQLTPQLLGTVV 236 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 ++ +++ L + + Y F ++ Q V L++I + Sbjct: 237 MEPEALSITGL-WRYIHYLGEQGLNNSRYWLAFWTKVLQPAVTVALVLLAISFIFGP--L 293 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF-LFCISSIFLLMIKKK 357 R IF + + F VF ++ Q + P+L + C+ ++ + ++ Sbjct: 294 RSVTLGQRIFTGVVVGF-VFRIIQDLLGPASQVFGFSPLLAVVLPACVCALIGAWLLRR 351 >gi|215919050|ref|NP_819829.2| putative permease [Coxiella burnetii RSA 493] gi|206583935|gb|AAO90343.2| hypothetical membrane spanning protein [Coxiella burnetii RSA 493] Length = 372 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 52/331 (15%), Positives = 121/331 (36%), Gaps = 21/331 (6%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ + I + L + L ++ I Q + +N ++ ++ +++I +P +L + Sbjct: 7 RYLCKEILGTLLATTLILLIIFMTNQFVHYLNDAAAGKITVKAVMEIMSLQVPLLLGYLL 66 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + L M + E++I+ G SR ++ ++ LA + + + +EPK Sbjct: 67 PLGLFLGGLLALGRMAVDHEMVILTACGVSRAQIVGMLIVLATFIGVIVAWLMLSVEPKM 126 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRL-DDDLYIKISKYNPNNT-LQGIFIVDSRDT-- 181 + ++ A + + F L + N ++ + +F+ S Sbjct: 127 QWYRVKILKDAVATASLEKIVPGRFQLLSSNGQVFYAGGVNDHHQKMLNVFLAQSETAGG 186 Query: 182 -QTHKIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 Q + A S I+ +G + P +MKF Y ++ S Sbjct: 187 KQRWDLVSADQAGEYSTAKGENFILFKNGFRYVGIPGELKYDVMKFGEYGIRLTSPAM-D 245 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 I + + S L + + + +E R+ L +F L+ + ++ Sbjct: 246 ITERVDAMPTSKLWHLHSKDL--------KAAAELQWRIAMPLSVWLFALLIVPLSEANP 297 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHK 328 ++ K + ++ I G + F ++ Sbjct: 298 ---RKGKFAQMLPAVLIYIG-YANFMFLGRT 324 >gi|271498969|ref|YP_003331994.1| permease YjgP/YjgQ family protein [Dickeya dadantii Ech586] gi|270342524|gb|ACZ75289.1| permease YjgP/YjgQ family protein [Dickeya dadantii Ech586] Length = 356 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 46/357 (12%), Positives = 122/357 (34%), Gaps = 4/357 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + YI + I + +M+ +V ++ +I+ + ++ V S+ + +P + Sbjct: 3 RVLDRYIGKTIFNTIMMTLFMLVSLSGIIKFVDQLRKVGQGGYSVMGAGLYTLLSVPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ +EL+++ +G +R+ + V+ AI L + + Sbjct: 63 EIFFPMAALLGALLGLGALATRSELVVMQASGFTRLQIAGSVMKTAIPLVLLTMAIGEWV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI-FIVDSRD 180 P + ++ + + L+ + +D ++ I + +N LQG+ + Sbjct: 123 APAGEQMARNYRSQMMYGGSMLSTQSGLWAKDGND-FVYIQRVAGDNELQGVNLYHFDKH 181 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ + YA S + + + S + + + L Sbjct: 182 SKLLSVRYAASAVYENGSWKLSQVEESDLNDSKQIGGSQTVS-GEWKTNLTPDKLGVVAL 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + ++ L + + Y+ +L L + L+++ Sbjct: 241 DPDALSIRGLYD-YIKYLRQSGQEANRYQLNMWSKLFAPLSVAVMMLMALSFIFGPLRSV 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I IS F V + + P + L + +L++K++ Sbjct: 300 PAGMRIVIGISFGFLFYVLDQIFGPLSLVYHMPPVLGALLPSALFLFISVMLLLKRR 356 >gi|210135251|ref|YP_002301690.1| integral membrane protein [Helicobacter pylori P12] gi|210133219|gb|ACJ08210.1| integral membrane protein [Helicobacter pylori P12] Length = 345 Score = 99.6 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 63/359 (17%), Positives = 138/359 (38%), Gaps = 19/359 (5%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + Y+ + + F L + FI+ ++ ++ ++ S L+++ Y +P + Sbjct: 2 IKHYLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFF 61 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 + P F L+ ++ + ELL+ + G S T+ K + L++L+S L + I+ P Sbjct: 62 ILPITFFAACALGLSRLSYDHELLVFFSLGVSPKTMTKAFVPLSLLVSAILLVFSLILIP 121 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 +S + + + F + D + + K NN+ + + ++ Sbjct: 122 TSKSAYYGFLRQ-KKDKIDINIRAGEFGQKLGDWLVYVDK-AENNSYDNLVLFSNKSLSQ 179 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL--QTESANSSTIVLK 241 AQ G+I+ LN + H + + F+ L + +S NS+ Sbjct: 180 ESFILAQKGNINNQNGVFELNLYKGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDTAYL 239 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 L + N N + +R +Q + +F L S+ + Sbjct: 240 QGTDYLGYWKKAFGKNANKNQK----------RRFSQAILVSLFPLASMFLIPLFGIANP 289 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL--MIKKKY 358 R K + + + + GV+ ++H I + + + + F++ +S L I K+Y Sbjct: 290 RFKTNWSYFYVLGAVGVY---FLMVHVISTDLFLMTFFFPFIWAFASYLLFRKFILKRY 345 >gi|148556807|ref|YP_001264389.1| permease YjgP/YjgQ family protein [Sphingomonas wittichii RW1] gi|148501997|gb|ABQ70251.1| permease YjgP/YjgQ family protein [Sphingomonas wittichii RW1] Length = 364 Score = 99.6 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 118/358 (32%), Gaps = 9/358 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRI-NLVSSSTESLNILLKISGYLIPTV 60 ++ LY+ R F +V + + +L ++++ L P + Sbjct: 9 RTMTLYMARMFLVRFAAVLAALVIVLMALDLLGESGDILAYPGNGDAQLWLYVTLRTPQI 68 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + PF + T ++N+N+E++ + G S ++ P++ ++ + I F Sbjct: 69 IARFLPFAALLATLITFVTLNQNSEIISMKAAGISAHQILAPLVVASLGVGIVSFTFNER 128 Query: 121 IEPKCRSTIKQLSAKAQLALT-FSYLEENLFFRLDDDLY--IKISKYNPNNTLQGIFIVD 177 + + +T+ + + N++ R DDL + L + I D Sbjct: 129 VVARATATLTAWQDADYGPIPRDRGIVPNIWVRDGDDLIHATAVRGRGAQARLDSVTIYD 188 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + I + I R + + + + Sbjct: 189 RDGGRLISIIKGERAVQAAGGWRIT----GASRFDVAKGVTLRLAGFDFAKGVTADRFTL 244 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + +++ L + + R+ +L+ L V+ L++ VAA A Sbjct: 245 ANVDPASKSIVQL-RTAIADLDAAGRPTGPLRAGLWHKLSGPLSAVLMPLLAAVAAFGLA 303 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 I ++L ++ V F+ + + P ++ FL + ++I+ Sbjct: 304 RSGHLFIRAVIGMALGFAYFVADNFALAMGNLGAYPPFLAAWAPFLLFLLIGETVLIR 361 >gi|331001131|ref|ZP_08324762.1| permease, YjgP/YjgQ family [Parasutterella excrementihominis YIT 11859] gi|329569436|gb|EGG51214.1| permease, YjgP/YjgQ family [Parasutterella excrementihominis YIT 11859] Length = 378 Score = 99.6 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 53/388 (13%), Positives = 131/388 (33%), Gaps = 42/388 (10%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTE-----SLNILLKISGY 55 MK I I +S L L +V + +L+ S S+ ++ Sbjct: 1 MKIVSRMIFAQIMKSSLFVLLTLVALF------AFFDLIGQSGNIGTSYSMGQAFLLTAL 54 Query: 56 LIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLF 115 ++PT V P + + L+ + ++ ++ +G +L I+L I + Sbjct: 55 ILPTRCYEVLPIAVMLGSIFTLSRLASTSQFTVLRVSGIGPWRFCGMLLMPGIVLVICAY 114 Query: 116 ISENIIEPKCRSTIKQLSAKAQ----------LALTFSYLEENLFFRLDDDLYIKISKYN 165 + N++ P + K+ + ++ N ++ + + Sbjct: 115 LLGNLVAPPAQRLAKEFKLDISGSAFTGKELDSGIWVRDVQRNEAGEPKKISFVNVQRLR 174 Query: 166 PNNTLQG--IFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDG---EVHRKSPISKDISI 220 P I++ D D I A+SG+ +++ +L+D V S++ + Sbjct: 175 PGEAAYDWVIYVFDRPD-HLTSIVTAKSGTY-SEQEGWVLHDVVEETVPTLPKESREQTQ 232 Query: 221 MKFKSYTL-------QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFH 273 + + + + +++K D +L L + + + + + F Sbjct: 233 ARVERKVMKSMVWGKSLDGNIFGLLMIKPEDMSLQEL-HYYIEYLKENGQTYKRFDTAFW 291 Query: 274 KRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWG--FSYIIHKIEQ 331 + L ++ L+S+ A R IF + I + + ++ Sbjct: 292 SKAFYPLAILVMLLLSMPFA--YQNARAGGMAIKIFCGIMIGIFYYALNNLFAFMSALDS 349 Query: 332 NPYYIPILY--LFLFCISSIFLLMIKKK 357 P I + + + + I + ++++ Sbjct: 350 VPSIISAILPSVMMTLAAIIAMWYVERR 377 >gi|311281180|ref|YP_003943411.1| permease YjgP/YjgQ family protein [Enterobacter cloacae SCF1] gi|308750375|gb|ADO50127.1| permease YjgP/YjgQ family protein [Enterobacter cloacae SCF1] Length = 360 Score = 99.6 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 57/361 (15%), Positives = 127/361 (35%), Gaps = 10/361 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I + LM+ +V + I++ ++ + + + L + +P Sbjct: 5 GVLDRYIGKTILTTILMTLFMLVS---LSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVP 61 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L + + +EL+++ +G +R+ + V+ AI L + Sbjct: 62 KDIQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVAISVMKTAIPLVLLTMAIG 121 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 + P+ + L A+A + ++ ++ + + YI I + + L GI I Sbjct: 122 EWMAPQGEQMARNLRAQAMYGSSLLSTQQGMWAKDGHN-YIYIERIKGADELGGISIYSF 180 Query: 179 RDTQT-HKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSS 236 D + + YA S D D++ L+ E + +P+ S ++ Sbjct: 181 NDKRRLQSVRYAASAKFDADKKVWRLSQVDESNLTNPLQITGSQTVSSTWKTNLTPDKLG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + ++S L N + Y+ ++ Q L + L+++ Sbjct: 241 VVALDPDALSISGLYN-YVKYLKSSGQDPGRYQLNMWSKVFQPLSVAVMMLMALSFIFGP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 IS F V + + P + L LMI++ Sbjct: 300 LRSVPMGVRVITGISFGFVFYVLDQIFGPLTLVYGIPPIVGALLPSATFFLISLWLMIRR 359 Query: 357 K 357 Sbjct: 360 S 360 >gi|54295468|ref|YP_127883.1| hypothetical protein lpl2554 [Legionella pneumophila str. Lens] gi|53755300|emb|CAH16794.1| hypothetical protein lpl2554 [Legionella pneumophila str. Lens] gi|307611506|emb|CBX01180.1| hypothetical protein LPW_28791 [Legionella pneumophila 130b] Length = 356 Score = 99.6 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 48/359 (13%), Positives = 115/359 (32%), Gaps = 9/359 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI + + + + L +V + I + +I+ + + + +P + Sbjct: 4 KILDRYIAKTVLSAIGLVTLMLVGLQIFILFVNQIDDLGRADYGIVQAGVFVLLQMPYQV 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L + ++EL+++ G S + VL ++++ + + + Sbjct: 64 YLFFPIASLLGCLVGLGVLANHSELVVMRAAGISIGQITGAVLKASLIVILLITSLGETV 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + A ++ R +D ++ I+ NTL+ ++ R Sbjct: 124 VPVMAHYANEYKVSALTGGQALLTPRGVWVRNGND-FVSIASVTRENTLR--YVNQFRFD 180 Query: 182 QTHKIYYAQS-GSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--STI 238 H + A+ I + I D + + F + Sbjct: 181 NQHNLKLARQISEIKYVNNSWIAYDVKQTEFAEDHTKA--YHFDTLPWDVPVKPEILKIT 238 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 ++ L L N + + Y+ F +R+TQ L ++ +++I Sbjct: 239 GTNPDEMTLHEL-NRYLREQQRNHQNVANYKFAFFQRITQPLNTMVMMILAIPFIFGPLR 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + F + F + + Q P + L LM + + Sbjct: 298 SSTMGSKLLVGAMVGFGFHILNRFFGPVSTVFQWPPELAAFSPTLIFSLIGIYLMRRVR 356 >gi|260772183|ref|ZP_05881100.1| putative membrane protein [Vibrio metschnikovii CIP 69.14] gi|260613050|gb|EEX38252.1| putative membrane protein [Vibrio metschnikovii CIP 69.14] Length = 356 Score = 99.6 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 50/358 (13%), Positives = 128/358 (35%), Gaps = 8/358 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I + + + V ++ +I+ ++++ V + L L +P + Sbjct: 3 KILDWYIGRTIIATTTLVLVTFVGLSGIIKYVEQLRKVGDGSYDLLQALFFVLLSVPRDV 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L ++ ++EL+++ +G S++ + VL AI L I + + Sbjct: 63 EMFFPMAALLGALIGLGALAASSELVVMQASGFSKLDIGLSVLKTAIPLMIIVTLLGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + + A A + ++ R +D +I ++K + Sbjct: 123 APQAQKMARDMRAFATSGGNILSVRTGVWARDAND-FIFVAKIDNERLYGLNMWRFDEQK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI-SKDISIMKFKSYTLQTESANSSTIVL 240 Q + +A+ D ++ ++ + + + + + Sbjct: 182 QLRHVVFAEQVDYLGD-NHWLMKQVQITDLQDNVVLTKQYLDVYQWRTALAPDKLAVVTV 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADKRAL 298 K + LS L + + + Y ++LTQ + L++ + R++ Sbjct: 241 KPEELALSGLYD-YVHYLKASEQDASRYELALWRKLTQPFSIGVMMLMALSFIFGPLRSV 299 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + + + F + F + + P + L ++ +L+ +K Sbjct: 300 TMGARILSGVIAGFT--FYISSEFFGPLSLVYGFPPAFGAIAPSLVFLTIAVMLLRRK 355 >gi|38704251|ref|NP_313266.2| hypothetical protein ECs5239 [Escherichia coli O157:H7 str. Sakai] gi|89110978|ref|AP_004758.1| conserved inner membrane protein [Escherichia coli str. K-12 substr. W3110] gi|90111715|ref|NP_418683.4| lipopolysaccharide export ABC permease of the LptBFGC export complex [Escherichia coli str. K-12 substr. MG1655] gi|110644621|ref|YP_672351.1| putative membrane protein YjgQ [Escherichia coli 536] gi|157155171|ref|YP_001465771.1| putative permease [Escherichia coli E24377A] gi|157163737|ref|YP_001461055.1| putative permease [Escherichia coli HS] gi|168749566|ref|ZP_02774588.1| putative permease [Escherichia coli O157:H7 str. EC4113] gi|168754844|ref|ZP_02779851.1| putative permease [Escherichia coli O157:H7 str. EC4401] gi|168760517|ref|ZP_02785524.1| putative permease [Escherichia coli O157:H7 str. EC4501] gi|168766553|ref|ZP_02791560.1| putative permease [Escherichia coli O157:H7 str. EC4486] gi|168774016|ref|ZP_02799023.1| putative permease [Escherichia coli O157:H7 str. EC4196] gi|168782789|ref|ZP_02807796.1| putative permease [Escherichia coli O157:H7 str. EC4076] gi|168784912|ref|ZP_02809919.1| putative permease [Escherichia coli O157:H7 str. EC869] gi|168797842|ref|ZP_02822849.1| putative permease [Escherichia coli O157:H7 str. EC508] gi|170021730|ref|YP_001726684.1| permease YjgP/YjgQ family protein [Escherichia coli ATCC 8739] gi|170083701|ref|YP_001733021.1| inner membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|170681768|ref|YP_001746666.1| putative permease [Escherichia coli SMS-3-5] gi|188493811|ref|ZP_03001081.1| putative permease [Escherichia coli 53638] gi|191168708|ref|ZP_03030487.1| putative permease [Escherichia coli B7A] gi|193063693|ref|ZP_03044781.1| putative permease [Escherichia coli E22] gi|194426570|ref|ZP_03059124.1| putative permease [Escherichia coli B171] gi|194437817|ref|ZP_03069912.1| putative permease [Escherichia coli 101-1] gi|195937288|ref|ZP_03082670.1| inner membrane protein [Escherichia coli O157:H7 str. EC4024] gi|208808552|ref|ZP_03250889.1| putative permease [Escherichia coli O157:H7 str. EC4206] gi|208812170|ref|ZP_03253499.1| putative permease [Escherichia coli O157:H7 str. EC4045] gi|208821551|ref|ZP_03261871.1| putative permease [Escherichia coli O157:H7 str. EC4042] gi|209396919|ref|YP_002273807.1| putative permease [Escherichia coli O157:H7 str. EC4115] gi|217326107|ref|ZP_03442191.1| putative permease [Escherichia coli O157:H7 str. TW14588] gi|218556809|ref|YP_002389723.1| hypothetical protein ECIAI1_4493 [Escherichia coli IAI1] gi|218561420|ref|YP_002394333.1| hypothetical protein ECS88_4849 [Escherichia coli S88] gi|218692649|ref|YP_002400861.1| hypothetical protein ECED1_5115 [Escherichia coli ED1a] gi|218698010|ref|YP_002405677.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli 55989] gi|218702965|ref|YP_002410594.1| hypothetical protein ECIAI39_4735 [Escherichia coli IAI39] gi|218707868|ref|YP_002415387.1| hypothetical protein ECUMN_4794 [Escherichia coli UMN026] gi|227886684|ref|ZP_04004489.1| inner membrane protein [Escherichia coli 83972] gi|238903363|ref|YP_002929159.1| conserved inner membrane protein [Escherichia coli BW2952] gi|253775115|ref|YP_003037946.1| permease YjgP/YjgQ family protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254164187|ref|YP_003047297.1| inner membrane protein [Escherichia coli B str. REL606] gi|254796282|ref|YP_003081119.1| inner membrane protein [Escherichia coli O157:H7 str. TW14359] gi|256019914|ref|ZP_05433779.1| conserved inner membrane protein [Shigella sp. D9] gi|256025198|ref|ZP_05439063.1| conserved inner membrane protein [Escherichia sp. 4_1_40B] gi|260847093|ref|YP_003224871.1| inner membrane protein [Escherichia coli O103:H2 str. 12009] gi|260858414|ref|YP_003232305.1| inner membrane protein [Escherichia coli O26:H11 str. 11368] gi|260871014|ref|YP_003237416.1| inner membrane protein [Escherichia coli O111:H- str. 11128] gi|261225381|ref|ZP_05939662.1| conserved inner membrane protein [Escherichia coli O157:H7 str. FRIK2000] gi|261255366|ref|ZP_05947899.1| inner membrane protein [Escherichia coli O157:H7 str. FRIK966] gi|293402887|ref|ZP_06646984.1| membrane protein [Escherichia coli FVEC1412] gi|293407982|ref|ZP_06651822.1| conserved hypothetical protein [Escherichia coli B354] gi|293417762|ref|ZP_06660384.1| lipopolysaccharide export system permease lptG [Escherichia coli B185] gi|293476565|ref|ZP_06664973.1| lipopolysaccharide export system permease lptG [Escherichia coli B088] gi|298378413|ref|ZP_06988297.1| lipopolysaccharide export system permease lptG [Escherichia coli FVEC1302] gi|300818513|ref|ZP_07098722.1| putative inner membrane protein [Escherichia coli MS 107-1] gi|300821369|ref|ZP_07101517.1| putative inner membrane protein [Escherichia coli MS 119-7] gi|300899412|ref|ZP_07117667.1| putative inner membrane protein [Escherichia coli MS 198-1] gi|300906110|ref|ZP_07123829.1| putative inner membrane protein [Escherichia coli MS 84-1] gi|300916358|ref|ZP_07133100.1| putative inner membrane protein [Escherichia coli MS 115-1] gi|300923940|ref|ZP_07139950.1| putative inner membrane protein [Escherichia coli MS 182-1] gi|300928088|ref|ZP_07143636.1| putative inner membrane protein [Escherichia coli MS 187-1] gi|300950208|ref|ZP_07164149.1| putative inner membrane protein [Escherichia coli MS 116-1] gi|300957115|ref|ZP_07169356.1| putative inner membrane protein [Escherichia coli MS 175-1] gi|300972387|ref|ZP_07171920.1| putative inner membrane protein [Escherichia coli MS 45-1] gi|300988160|ref|ZP_07178580.1| putative inner membrane protein [Escherichia coli MS 200-1] gi|301024382|ref|ZP_07188070.1| putative inner membrane protein [Escherichia coli MS 69-1] gi|301050052|ref|ZP_07196964.1| putative inner membrane protein [Escherichia coli MS 185-1] gi|301304685|ref|ZP_07210793.1| putative inner membrane protein [Escherichia coli MS 124-1] gi|301325193|ref|ZP_07218717.1| putative inner membrane protein [Escherichia coli MS 78-1] gi|301643390|ref|ZP_07243440.1| putative inner membrane protein [Escherichia coli MS 146-1] gi|306815520|ref|ZP_07449669.1| Inner membrane protein yjgQ [Escherichia coli NC101] gi|307140957|ref|ZP_07500313.1| Inner membrane protein yjgQ [Escherichia coli H736] gi|307312963|ref|ZP_07592591.1| permease YjgP/YjgQ family protein [Escherichia coli W] gi|309792903|ref|ZP_07687331.1| putative inner membrane protein [Escherichia coli MS 145-7] gi|312965943|ref|ZP_07780169.1| conserved hypothetical protein [Escherichia coli 2362-75] gi|312973920|ref|ZP_07788091.1| conserved hypothetical protein [Escherichia coli 1827-70] gi|331645011|ref|ZP_08346128.1| inner membrane protein YjgQ [Escherichia coli H736] gi|331650395|ref|ZP_08351467.1| inner membrane protein YjgQ [Escherichia coli M605] gi|331656096|ref|ZP_08357084.1| inner membrane protein YjgQ [Escherichia coli M718] gi|331660843|ref|ZP_08361775.1| inner membrane protein YjgQ [Escherichia coli TA206] gi|331665931|ref|ZP_08366825.1| inner membrane protein YjgQ [Escherichia coli TA143] gi|331671170|ref|ZP_08372003.1| inner membrane protein YjgQ [Escherichia coli TA271] gi|331671403|ref|ZP_08372201.1| inner membrane protein YjgQ [Escherichia coli TA280] gi|331680400|ref|ZP_08381059.1| inner membrane protein YjgQ [Escherichia coli H591] gi|331681282|ref|ZP_08381919.1| inner membrane protein YjgQ [Escherichia coli H299] gi|83288182|sp|P0ADC7|LPTG_ECOL6 RecName: Full=Lipopolysaccharide export system permease protein lptG gi|83288183|sp|P0ADC6|LPTG_ECOLI RecName: Full=Lipopolysaccharide export system permease protein lptG gi|31323181|gb|AAP43525.1| YjgQ [Escherichia coli B] gi|85677009|dbj|BAE78259.1| conserved inner membrane protein [Escherichia coli str. K12 substr. W3110] gi|87082400|gb|AAC77219.2| lipopolysaccharide export ABC permease of the LptBFGC export complex [Escherichia coli str. K-12 substr. MG1655] gi|110346213|gb|ABG72450.1| putative membrane protein YjgQ [Escherichia coli 536] gi|157069417|gb|ABV08672.1| putative permease [Escherichia coli HS] gi|157077201|gb|ABV16909.1| putative permease [Escherichia coli E24377A] gi|169756658|gb|ACA79357.1| permease YjgP/YjgQ family protein [Escherichia coli ATCC 8739] gi|169891536|gb|ACB05243.1| conserved inner membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|170519486|gb|ACB17664.1| putative permease [Escherichia coli SMS-3-5] gi|187770216|gb|EDU34060.1| putative permease [Escherichia coli O157:H7 str. EC4196] gi|188016197|gb|EDU54319.1| putative permease [Escherichia coli O157:H7 str. EC4113] gi|188489010|gb|EDU64113.1| putative permease [Escherichia coli 53638] gi|188999755|gb|EDU68741.1| putative permease [Escherichia coli O157:H7 str. EC4076] gi|189357825|gb|EDU76244.1| putative permease [Escherichia coli O157:H7 str. EC4401] gi|189364202|gb|EDU82621.1| putative permease [Escherichia coli O157:H7 str. EC4486] gi|189368974|gb|EDU87390.1| putative permease [Escherichia coli O157:H7 str. EC4501] gi|189375169|gb|EDU93585.1| putative permease [Escherichia coli O157:H7 str. EC869] gi|189379540|gb|EDU97956.1| putative permease [Escherichia coli O157:H7 str. EC508] gi|190901256|gb|EDV61026.1| putative permease [Escherichia coli B7A] gi|192930680|gb|EDV83286.1| putative permease [Escherichia coli E22] gi|194415309|gb|EDX31577.1| putative permease [Escherichia coli B171] gi|194423313|gb|EDX39305.1| putative permease [Escherichia coli 101-1] gi|208728353|gb|EDZ77954.1| putative permease [Escherichia coli O157:H7 str. EC4206] gi|208733447|gb|EDZ82134.1| putative permease [Escherichia coli O157:H7 str. EC4045] gi|208741674|gb|EDZ89356.1| putative permease [Escherichia coli O157:H7 str. EC4042] gi|209158319|gb|ACI35752.1| putative permease [Escherichia coli O157:H7 str. EC4115] gi|217322328|gb|EEC30752.1| putative permease [Escherichia coli O157:H7 str. TW14588] gi|218354742|emb|CAV01806.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli 55989] gi|218363578|emb|CAR01235.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli IAI1] gi|218368189|emb|CAR05997.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli S88] gi|218372951|emb|CAR20832.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli IAI39] gi|218430213|emb|CAR11214.2| conserved hypothetical protein; putative inner membrane protein [Escherichia coli ED1a] gi|218434965|emb|CAR15906.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli UMN026] gi|222036034|emb|CAP78779.1| Inner membrane protein yjgQ [Escherichia coli LF82] gi|227836257|gb|EEJ46723.1| inner membrane protein [Escherichia coli 83972] gi|238860250|gb|ACR62248.1| conserved inner membrane protein [Escherichia coli BW2952] gi|242379782|emb|CAQ34609.1| LptG, subunit of LptABCFG ABC transporter [Escherichia coli BL21(DE3)] gi|253326159|gb|ACT30761.1| permease YjgP/YjgQ family protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253976090|gb|ACT41761.1| conserved inner membrane protein [Escherichia coli B str. REL606] gi|253980246|gb|ACT45916.1| conserved inner membrane protein [Escherichia coli BL21(DE3)] gi|254595682|gb|ACT75043.1| conserved inner membrane protein [Escherichia coli O157:H7 str. TW14359] gi|257757063|dbj|BAI28565.1| inner membrane protein [Escherichia coli O26:H11 str. 11368] gi|257762240|dbj|BAI33737.1| inner membrane protein [Escherichia coli O103:H2 str. 12009] gi|257767370|dbj|BAI38865.1| inner membrane protein [Escherichia coli O111:H- str. 11128] gi|260450918|gb|ACX41340.1| permease YjgP/YjgQ family protein [Escherichia coli DH1] gi|281181360|dbj|BAI57690.1| conserved hypothetical protein [Escherichia coli SE15] gi|284924432|emb|CBG37557.1| putative permease [Escherichia coli 042] gi|291321018|gb|EFE60460.1| lipopolysaccharide export system permease lptG [Escherichia coli B088] gi|291429802|gb|EFF02816.1| membrane protein [Escherichia coli FVEC1412] gi|291430480|gb|EFF03478.1| lipopolysaccharide export system permease lptG [Escherichia coli B185] gi|291472233|gb|EFF14715.1| conserved hypothetical protein [Escherichia coli B354] gi|298280747|gb|EFI22248.1| lipopolysaccharide export system permease lptG [Escherichia coli FVEC1302] gi|300298210|gb|EFJ54595.1| putative inner membrane protein [Escherichia coli MS 185-1] gi|300305970|gb|EFJ60490.1| putative inner membrane protein [Escherichia coli MS 200-1] gi|300316133|gb|EFJ65917.1| putative inner membrane protein [Escherichia coli MS 175-1] gi|300356990|gb|EFJ72860.1| putative inner membrane protein [Escherichia coli MS 198-1] gi|300396608|gb|EFJ80146.1| putative inner membrane protein [Escherichia coli MS 69-1] gi|300402053|gb|EFJ85591.1| putative inner membrane protein [Escherichia coli MS 84-1] gi|300410966|gb|EFJ94504.1| putative inner membrane protein [Escherichia coli MS 45-1] gi|300416318|gb|EFJ99628.1| putative inner membrane protein [Escherichia coli MS 115-1] gi|300419818|gb|EFK03129.1| putative inner membrane protein [Escherichia coli MS 182-1] gi|300450448|gb|EFK14068.1| putative inner membrane protein [Escherichia coli MS 116-1] gi|300463885|gb|EFK27378.1| putative inner membrane protein [Escherichia coli MS 187-1] gi|300526258|gb|EFK47327.1| putative inner membrane protein [Escherichia coli MS 119-7] gi|300528917|gb|EFK49979.1| putative inner membrane protein [Escherichia coli MS 107-1] gi|300840035|gb|EFK67795.1| putative inner membrane protein [Escherichia coli MS 124-1] gi|300847954|gb|EFK75714.1| putative inner membrane protein [Escherichia coli MS 78-1] gi|301078220|gb|EFK93026.1| putative inner membrane protein [Escherichia coli MS 146-1] gi|305851182|gb|EFM51637.1| Inner membrane protein yjgQ [Escherichia coli NC101] gi|306907131|gb|EFN37638.1| permease YjgP/YjgQ family protein [Escherichia coli W] gi|307556432|gb|ADN49207.1| putative membrane protein YjgQ [Escherichia coli ABU 83972] gi|308123189|gb|EFO60451.1| putative inner membrane protein [Escherichia coli MS 145-7] gi|309704766|emb|CBJ04117.1| putative permease [Escherichia coli ETEC H10407] gi|310331454|gb|EFP98710.1| conserved hypothetical protein [Escherichia coli 1827-70] gi|312289186|gb|EFR17080.1| conserved hypothetical protein [Escherichia coli 2362-75] gi|312948915|gb|ADR29742.1| inner membrane protein [Escherichia coli O83:H1 str. NRG 857C] gi|315063569|gb|ADT77896.1| conserved inner membrane protein [Escherichia coli W] gi|315138813|dbj|BAJ45972.1| inner membrane protein yjgQ [Escherichia coli DH1] gi|315255621|gb|EFU35589.1| putative inner membrane protein [Escherichia coli MS 85-1] gi|315293627|gb|EFU52979.1| putative inner membrane protein [Escherichia coli MS 153-1] gi|315298979|gb|EFU58233.1| putative inner membrane protein [Escherichia coli MS 16-3] gi|320639019|gb|EFX08665.1| lipopolysaccharide ABC transporter permease [Escherichia coli O157:H7 str. G5101] gi|320644389|gb|EFX13454.1| lipopolysaccharide ABC transporter permease [Escherichia coli O157:H- str. 493-89] gi|320649706|gb|EFX18230.1| lipopolysaccharide ABC transporter permease [Escherichia coli O157:H- str. H 2687] gi|320655103|gb|EFX23064.1| lipopolysaccharide ABC transporter permease [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320660609|gb|EFX28070.1| lipopolysaccharide ABC transporter permease [Escherichia coli O55:H7 str. USDA 5905] gi|320665536|gb|EFX32582.1| lipopolysaccharide ABC transporter permease [Escherichia coli O157:H7 str. LSU-61] gi|323157529|gb|EFZ43638.1| hypothetical protein ECEPECA14_0586 [Escherichia coli EPECa14] gi|323162061|gb|EFZ47933.1| hypothetical protein ECE128010_1826 [Escherichia coli E128010] gi|323171708|gb|EFZ57354.1| hypothetical protein ECLT68_3917 [Escherichia coli LT-68] gi|323176177|gb|EFZ61769.1| hypothetical protein ECOK1180_4867 [Escherichia coli 1180] gi|323181996|gb|EFZ67407.1| hypothetical protein ECOK1357_4674 [Escherichia coli 1357] gi|323189856|gb|EFZ75134.1| hypothetical protein ECRN5871_1643 [Escherichia coli RN587/1] gi|323380351|gb|ADX52619.1| permease YjgP/YjgQ family protein [Escherichia coli KO11] gi|323935384|gb|EGB31732.1| inner membrane protein yjgQ [Escherichia coli E1520] gi|323940180|gb|EGB36374.1| inner membrane protein yjgQ [Escherichia coli E482] gi|323945995|gb|EGB42033.1| inner membrane protein yjgQ [Escherichia coli H120] gi|323960303|gb|EGB55944.1| inner membrane protein yjgQ [Escherichia coli H489] gi|323970484|gb|EGB65743.1| inner membrane protein yjgQ [Escherichia coli TA007] gi|323975395|gb|EGB70496.1| inner membrane protein yjgQ [Escherichia coli TW10509] gi|324005135|gb|EGB74354.1| putative inner membrane protein [Escherichia coli MS 57-2] gi|324013726|gb|EGB82945.1| putative inner membrane protein [Escherichia coli MS 60-1] gi|324019239|gb|EGB88458.1| putative inner membrane protein [Escherichia coli MS 117-3] gi|324118823|gb|EGC12715.1| inner membrane protein yjgQ [Escherichia coli E1167] gi|331035986|gb|EGI08224.1| inner membrane protein YjgQ [Escherichia coli H736] gi|331040789|gb|EGI12947.1| inner membrane protein YjgQ [Escherichia coli M605] gi|331046450|gb|EGI18540.1| inner membrane protein YjgQ [Escherichia coli M718] gi|331051885|gb|EGI23924.1| inner membrane protein YjgQ [Escherichia coli TA206] gi|331056982|gb|EGI28976.1| inner membrane protein YjgQ [Escherichia coli TA143] gi|331061759|gb|EGI33685.1| inner membrane protein YjgQ [Escherichia coli TA271] gi|331071248|gb|EGI42605.1| inner membrane protein YjgQ [Escherichia coli TA280] gi|331071863|gb|EGI43199.1| inner membrane protein YjgQ [Escherichia coli H591] gi|331081503|gb|EGI52664.1| inner membrane protein YjgQ [Escherichia coli H299] gi|332083263|gb|EGI88494.1| hypothetical protein SB521682_5142 [Shigella boydii 5216-82] gi|332083781|gb|EGI88999.1| hypothetical protein SD15574_5323 [Shigella dysenteriae 155-74] gi|332346341|gb|AEE59675.1| conserved hypothetical protein [Escherichia coli UMNK88] Length = 360 Score = 99.6 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 54/361 (14%), Positives = 127/361 (35%), Gaps = 11/361 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + + I++ ++ + + + L + +P Sbjct: 5 GVLDRYIGKTI---FTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVP 61 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L + + +EL+++ +G +R+ + V+ AI L + Sbjct: 62 KDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIG 121 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-D 177 + P+ + A+A + ++ L+ + ++ ++ I + + L GI I Sbjct: 122 EWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNN-FVYIERVKGDEELGGISIYAF 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + + YA + D + + L+ E +P S ++ Sbjct: 181 NENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + ++S L N + Y+ ++ Q L + L+++ Sbjct: 241 VVALDPDALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 IS F V F + P +L F + S++LLM K Sbjct: 300 LRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRK 359 Query: 356 K 356 Sbjct: 360 S 360 >gi|217034468|ref|ZP_03439880.1| hypothetical protein HP9810_890g13 [Helicobacter pylori 98-10] gi|216943070|gb|EEC22547.1| hypothetical protein HP9810_890g13 [Helicobacter pylori 98-10] gi|308062367|gb|ADO04255.1| hypothetical protein HPCU_05530 [Helicobacter pylori Cuz20] gi|317178605|dbj|BAJ56393.1| hypothetical protein HPF30_0296 [Helicobacter pylori F30] gi|332673892|gb|AEE70709.1| conserved hypothetical protein [Helicobacter pylori 83] Length = 345 Score = 99.6 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 62/359 (17%), Positives = 135/359 (37%), Gaps = 19/359 (5%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + Y+ + + F L + FI+ ++ ++ ++ S L+++ Y +P + Sbjct: 2 IKHYLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFF 61 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 + P F L+ ++ + ELL+ + G S + K + L++L+S L + I+ P Sbjct: 62 ILPITFFAACALGLSRLSYDHELLVFFSLGVSPKKMTKAFVPLSLLVSAILLVFSLILIP 121 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 +S + + + F + D + + K NN+ + + ++ Sbjct: 122 TSKSAYYGFLRQ-KKDKIDINIRAGEFGQKLGDWLVYVDK-AENNSYDNLVLFSNKSLSQ 179 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL--QTESANSSTIVLK 241 AQ G+I+ LN H + + F+ L + +S NS+ Sbjct: 180 ESFILAQKGNINNQNGVFELNLYSGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYL 239 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 L + N N + +R +Q + +F L S+ + Sbjct: 240 QGTDYLGYWKKAFGKNANKNQK----------RRFSQAILVSLFPLASVFLIPLFGIANP 289 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL--MIKKKY 358 R K + + + + GV+ ++H I + + + + F++ S L I K+Y Sbjct: 290 RFKTNWSYFYVLGAVGVY---FLMVHVISTDLFLMTFFFPFIWAFVSYLLFRKFILKRY 345 >gi|37528300|ref|NP_931645.1| hypothetical protein plu4479 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36787738|emb|CAE16851.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 359 Score = 99.6 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 56/358 (15%), Positives = 129/358 (36%), Gaps = 4/358 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI R I ++ LM+ +V ++ +I+ ++++ V + +P + Sbjct: 3 GVLDRYIGRTILQTILMTLFMLVSLSGIIKFVEQLRKVGQGEYTTISAGLYVLLSVPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ +EL+++ +G +R+ + V+ AI L I + + Sbjct: 63 QIFFPMAALLGALLGLGTLATRSELVVMQASGFTRMQIAGSVMKTAIPLVILTMVIGEWV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI-VDSRD 180 P+ + A+ L + + ++ DD +I I + + ++G+ I + D Sbjct: 123 APQGEQMARNYRAQKMLGGSLVSTNKGMWTIDGDD-FIYIQRIVSDTEIKGVNIYHFNDD 181 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-DISIMKFKSYTLQTESANSSTIV 239 + + YA S D D L+ E + K S + + + + Sbjct: 182 KKLLSVKYAASAVYDKDNDLWKLSQVEESDLTDSKKITGSQRISADWKILLTPEQLNVVA 241 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L+ ++S L + Y+ K++ L + L+++ Sbjct: 242 LEPEALSISGLY-QYIKYLKQSEQESGRYQLNMWKKIFAPLSVAVMMLMALSFIFGPLRS 300 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P + L L ++ L++K++ Sbjct: 301 VPMGVRIVTGISFGFLFYVLNEIFGPLSLVYSVPAVLAALLPSLLFLTVSIYLLLKRR 358 >gi|30065451|ref|NP_839622.1| hypothetical protein S4488 [Shigella flexneri 2a str. 2457T] gi|56480550|ref|NP_709939.2| hypothetical protein SF4227 [Shigella flexneri 2a str. 301] gi|30043715|gb|AAP19434.1| hypothetical protein S4488 [Shigella flexneri 2a str. 2457T] gi|56384101|gb|AAN45646.2| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|313646463|gb|EFS10925.1| hypothetical protein SF2457T_5378 [Shigella flexneri 2a str. 2457T] gi|332748940|gb|EGJ79363.1| hypothetical protein SFK671_4979 [Shigella flexneri K-671] gi|332749802|gb|EGJ80215.1| hypothetical protein SF274771_5046 [Shigella flexneri 2747-71] gi|332763113|gb|EGJ93356.1| hypothetical protein SF293071_4855 [Shigella flexneri 2930-71] gi|333010221|gb|EGK29654.1| hypothetical protein SFVA6_0009 [Shigella flexneri VA-6] gi|333011252|gb|EGK30666.1| hypothetical protein SFK272_0205 [Shigella flexneri K-272] gi|333011952|gb|EGK31337.1| hypothetical protein SFK304_5275 [Shigella flexneri K-304] gi|333012149|gb|EGK31531.1| hypothetical protein SFK227_5242 [Shigella flexneri K-227] Length = 360 Score = 99.6 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 54/361 (14%), Positives = 127/361 (35%), Gaps = 11/361 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + + I++ ++ + + + L + +P Sbjct: 5 GVLDRYIGKTI---FTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVP 61 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L + + +EL+++ +G +R+ + V+ AI L + Sbjct: 62 KDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIG 121 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-D 177 + P+ + A+A + ++ L+ + ++ ++ I + + L GI I Sbjct: 122 EWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNN-FVYIERVKGDEVLGGISIYAF 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + + YA + D + + L+ E +P S ++ Sbjct: 181 NENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTDLTPDKLG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + ++S L N + Y+ ++ Q L + L+++ Sbjct: 241 VVALDPDALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 IS F V F + P +L F + S++LLM K Sbjct: 300 LRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRK 359 Query: 356 K 356 Sbjct: 360 S 360 >gi|86147549|ref|ZP_01065859.1| hypothetical protein MED222_22708 [Vibrio sp. MED222] gi|85834588|gb|EAQ52736.1| hypothetical protein MED222_22708 [Vibrio sp. MED222] Length = 323 Score = 99.6 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 50/319 (15%), Positives = 117/319 (36%), Gaps = 8/319 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +LYI R I + + + V ++ +I+ ++++ V T L L IP + Sbjct: 3 KILDLYIGRTIIATTSLVLVTFVGLSGIIKYVEQLRKVGRGTYDLLQALYFVLLSIPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++ + VL AI L + + + Sbjct: 63 EMFFPMAALLGALIGLGMLAASSELVVMQAAGFSKLDIGLSVLKTAIPLMVIVTLLGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + L + + + ++ R +D +I I K + + + Sbjct: 123 APQAQKMARDLRTISVAGGSIISTQSGVWARDAND-FIFIVKIDDDKLYGLNMWRYDENK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDI--SIMKFKSYTLQTESANSSTIV 239 Y++ D + D EV + S+ F S+ + + Sbjct: 182 ALKTAIYSKEVDYVGD-NVWTMRDVEVTSFENEIQVTKESLPTF-SWETSLAPDKLAIVT 239 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADKRA 297 +K + +LS L + + + Y +++TQ + + L++ + R+ Sbjct: 240 VKPEELSLSGLYD-YVSYLKASEQDAARYELALWRKITQPISIAVMMLMALSFIFGPLRS 298 Query: 298 LVRQRKKIHPIFISLSISF 316 + + + + + Sbjct: 299 VTMGARILSGVIAGFTFYI 317 >gi|116747638|ref|YP_844325.1| permease YjgP/YjgQ family protein [Syntrophobacter fumaroxidans MPOB] gi|116696702|gb|ABK15890.1| permease YjgP/YjgQ family protein [Syntrophobacter fumaroxidans MPOB] Length = 360 Score = 99.6 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 47/366 (12%), Positives = 113/366 (30%), Gaps = 24/366 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ Y+LR F+++ + ++ + + + P+V Sbjct: 1 MRIIPRYVLRHFLPVFMLALFTFTSLYLIVDFFENMEQFIEKRVPAADTIAYFLNKTPSV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 P + L + RN EL+ ++ G +T + P++ A ++ + Sbjct: 61 AAQGIPMAALLGALITLGLLKRNRELIALEAAGVKTVTYVTPIVAAAFFIAAVHLVLGET 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR- 179 + ++ Q+S K + F ++++ N + + D R Sbjct: 121 VS----RSMNQVSTKIWNEQVQR--RKGHFSWGVENVWYH-----GQNVIYQVRFYDKRT 169 Query: 180 -----------DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 D + + D G + S + +++TL Sbjct: 170 QTLEKVSLFFLDPSFRLVQRLDARRFRWDGARWQAEQGLFLKFSESGTEQETFDQRAFTL 229 Query: 229 QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 Q A+ S + + + L Y E H R+ L ++ ++ Sbjct: 230 QETPADFSGLETIPEELD-WLDLYRYAEKIRQEGYNSLPYIIELHLRVAFPLSAIVLAIL 288 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 I+ A ++++ I + + S+ V + P + + + +++ Sbjct: 289 GIIIALRQSMHGGIALGVGIGLLVGSSYFVVQQLGCALAGAGALPPVVGVWAANVIFLAA 348 Query: 349 IFLLMI 354 L I Sbjct: 349 AVYLWI 354 >gi|323965651|gb|EGB61105.1| inner membrane protein yjgQ [Escherichia coli M863] gi|327250208|gb|EGE61927.1| hypothetical protein ECSTEC7V_5012 [Escherichia coli STEC_7v] Length = 360 Score = 99.6 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 54/361 (14%), Positives = 127/361 (35%), Gaps = 11/361 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + + I++ ++ + + + L + +P Sbjct: 5 GVLDRYIGKTI---FTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVP 61 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L + + +EL+++ +G +R+ + V+ AI L + Sbjct: 62 KDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIG 121 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-D 177 + P+ + A+A + ++ L+ + ++ ++ I + + L GI I Sbjct: 122 EWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNN-FVYIERVKGDEELGGISIYAF 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + + YA + D + + L+ E +P S ++ Sbjct: 181 NENRRLESVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + ++S L N + Y+ ++ Q L + L+++ Sbjct: 241 VVALDPDALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 IS F V F + P +L F + S++LLM K Sbjct: 300 LRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRK 359 Query: 356 K 356 Sbjct: 360 S 360 >gi|261839824|gb|ACX99589.1| hypothetical protein HPKB_1021 [Helicobacter pylori 52] gi|315586981|gb|ADU41362.1| conserved hypothetical protein [Helicobacter pylori 35A] gi|317182344|dbj|BAJ60128.1| hypothetical protein HPF57_1054 [Helicobacter pylori F57] Length = 345 Score = 99.6 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 63/359 (17%), Positives = 136/359 (37%), Gaps = 19/359 (5%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + Y+ + + F L + FI+ ++ ++ ++ S L+++ Y +P + Sbjct: 2 IKHYLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFF 61 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 + P F L+ ++ + ELL+ + G S T+ K + L++L+S L + I+ P Sbjct: 62 ILPITFFAACALGLSRLSYDHELLVFFSLGVSPKTMTKAFVPLSLLVSAILLVFSLILIP 121 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 +S + + + F + D + + K NN+ + + ++ Sbjct: 122 TSKSAYYGFLRQ-KKDKIDINIRAGEFGQKLGDWLVYVDK-AENNSYDNLVLFSNKSLSQ 179 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL--QTESANSSTIVLK 241 AQ G+I+ LN H + + F+ L + +S NS+ Sbjct: 180 ESFILAQKGNINNQNGVFELNLYSGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYL 239 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 L + N N + +R +Q + +F L S+ + Sbjct: 240 QGTDYLGYWKKAFGKNANKNQK----------RRFSQAILVSLFPLASVFLIPLFGIANP 289 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL--MIKKKY 358 R K + + + + GV+ ++H I + + + + F++ S L I K+Y Sbjct: 290 RFKTNWSYFYVLGAVGVY---FLMVHVISTDLFLMTFFFPFIWAFVSYLLFRKFILKRY 345 >gi|22124661|ref|NP_668084.1| hypothetical protein y0748 [Yersinia pestis KIM 10] gi|45440497|ref|NP_992036.1| hypothetical protein YP_0645 [Yersinia pestis biovar Microtus str. 91001] gi|51594885|ref|YP_069076.1| membrane protein, permease [Yersinia pseudotuberculosis IP 32953] gi|108808931|ref|YP_652847.1| hypothetical protein YPA_2940 [Yersinia pestis Antiqua] gi|108810814|ref|YP_646581.1| hypothetical protein YPN_0649 [Yersinia pestis Nepal516] gi|145600503|ref|YP_001164579.1| hypothetical protein YPDSF_3249 [Yersinia pestis Pestoides F] gi|153949000|ref|YP_001402495.1| permease [Yersinia pseudotuberculosis IP 31758] gi|153997519|ref|ZP_02022619.1| putative membrane protein [Yersinia pestis CA88-4125] gi|162420587|ref|YP_001608340.1| hypothetical protein YpAngola_A4049 [Yersinia pestis Angola] gi|165925751|ref|ZP_02221583.1| putative permease [Yersinia pestis biovar Orientalis str. F1991016] gi|166010149|ref|ZP_02231047.1| putative permease [Yersinia pestis biovar Antiqua str. E1979001] gi|166214265|ref|ZP_02240300.1| putative permease [Yersinia pestis biovar Antiqua str. B42003004] gi|167399516|ref|ZP_02305040.1| putative permease [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167423672|ref|ZP_02315425.1| putative permease [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170025892|ref|YP_001722397.1| permease YjgP/YjgQ family protein [Yersinia pseudotuberculosis YPIII] gi|186893895|ref|YP_001871007.1| permease YjgP/YjgQ family protein [Yersinia pseudotuberculosis PB1/+] gi|218930455|ref|YP_002348330.1| hypothetical protein YPO3439 [Yersinia pestis CO92] gi|229839083|ref|ZP_04459242.1| conserved inner membrane protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229896571|ref|ZP_04511738.1| conserved inner membrane protein [Yersinia pestis Pestoides A] gi|229899646|ref|ZP_04514787.1| conserved inner membrane protein [Yersinia pestis biovar Orientalis str. India 195] gi|229901017|ref|ZP_04516141.1| conserved inner membrane protein [Yersinia pestis Nepal516] gi|270489197|ref|ZP_06206271.1| inner membrane family protein [Yersinia pestis KIM D27] gi|294505143|ref|YP_003569205.1| hypothetical protein YPZ3_3034 [Yersinia pestis Z176003] gi|21957470|gb|AAM84335.1|AE013676_8 hypothetical protein y0748 [Yersinia pestis KIM 10] gi|45435354|gb|AAS60913.1| putative membrane protein [Yersinia pestis biovar Microtus str. 91001] gi|51588167|emb|CAH19773.1| putative membrane protein, permease [Yersinia pseudotuberculosis IP 32953] gi|108774462|gb|ABG16981.1| membrane protein [Yersinia pestis Nepal516] gi|108780844|gb|ABG14902.1| putative membrane protein [Yersinia pestis Antiqua] gi|115349066|emb|CAL22028.1| putative membrane protein [Yersinia pestis CO92] gi|145212199|gb|ABP41606.1| membrane protein [Yersinia pestis Pestoides F] gi|149289156|gb|EDM39236.1| putative membrane protein [Yersinia pestis CA88-4125] gi|152960495|gb|ABS47956.1| putative permease [Yersinia pseudotuberculosis IP 31758] gi|162353402|gb|ABX87350.1| putative permease [Yersinia pestis Angola] gi|165922363|gb|EDR39540.1| putative permease [Yersinia pestis biovar Orientalis str. F1991016] gi|165991056|gb|EDR43357.1| putative permease [Yersinia pestis biovar Antiqua str. E1979001] gi|166204497|gb|EDR48977.1| putative permease [Yersinia pestis biovar Antiqua str. B42003004] gi|167052020|gb|EDR63428.1| putative permease [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057842|gb|EDR67588.1| putative permease [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169752426|gb|ACA69944.1| permease YjgP/YjgQ family protein [Yersinia pseudotuberculosis YPIII] gi|186696921|gb|ACC87550.1| permease YjgP/YjgQ family protein [Yersinia pseudotuberculosis PB1/+] gi|229682356|gb|EEO78448.1| conserved inner membrane protein [Yersinia pestis Nepal516] gi|229687138|gb|EEO79213.1| conserved inner membrane protein [Yersinia pestis biovar Orientalis str. India 195] gi|229695449|gb|EEO85496.1| conserved inner membrane protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700349|gb|EEO88381.1| conserved inner membrane protein [Yersinia pestis Pestoides A] gi|262363204|gb|ACY59925.1| hypothetical protein YPD4_3021 [Yersinia pestis D106004] gi|270337701|gb|EFA48478.1| inner membrane family protein [Yersinia pestis KIM D27] gi|294355602|gb|ADE65943.1| hypothetical protein YPZ3_3034 [Yersinia pestis Z176003] Length = 358 Score = 99.6 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 55/359 (15%), Positives = 129/359 (35%), Gaps = 7/359 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI R I + LM+ L +V ++ +I+ + ++ V S + IP + Sbjct: 3 GVLDRYIGRTILNTILMTLLMLVSLSGIIKFVDQLRKVGQGDYSAASAGMYTILSIPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ +EL+++ +G +R+ + V+ AI L + + Sbjct: 63 AVFFPMAALLGALLGLGTLASRSELVVMQASGFTRMQIAASVMKTAIPLVLLTMAIGEWV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI-VDSRD 180 P+ T + + + + L+ + D +I I + + + L G+ I ++ Sbjct: 123 APQGEQTARNFRTQQMYGGSLLSTQSGLWAKDGSD-FIYIQRVSGESELTGVNIYHFDKE 181 Query: 181 TQTHKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + YA + + + D + L+ E +P S + + Sbjct: 182 DRLLSVRYAATATYEKDNKTWRLSQVDESDLSNPTQVTGSQTLTGEWKTNLTPEKLGVVA 241 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADKRA 297 + + ++S L + + Y ++ + L++ + R+ Sbjct: 242 MDPDSLSISGL-HDYSKYLQQSGQESNRYELSMWSKVFAPFSVAVMMLMALSFIFGPLRS 300 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + + IF F + P +L LF + SI LL+ ++ Sbjct: 301 VPMGVRVVTGIFFGFVFYVLDQV-FGRLSLVYGIPPMLGALLPSMLFLLISICLLLKRR 358 >gi|15644990|ref|NP_207160.1| hypothetical protein HP0362 [Helicobacter pylori 26695] gi|2313464|gb|AAD07430.1| conserved hypothetical integral membrane protein [Helicobacter pylori 26695] Length = 345 Score = 99.6 bits (247), Expect = 7e-19, Method: Composition-based stats. Identities = 63/359 (17%), Positives = 136/359 (37%), Gaps = 19/359 (5%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + Y+ + + F L + FI+ ++ ++ ++ S L+++ Y +P + Sbjct: 2 IKHYLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFF 61 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 + P F L+ ++ + ELL+ + G S + K L++L+S L + I+ P Sbjct: 62 ILPITFFAACALGLSRLSYDHELLVFFSLGVSPKKMTKVFAPLSLLVSAILLVFSLILIP 121 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 +ST + + + F + D + + K NN+ + + ++ Sbjct: 122 TSKSTYYGFLRQ-KKDKIDINIRAGEFGQKLGDWLVYVDK-TKNNSYDNLVLFSNKSLSQ 179 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL--QTESANSSTIVLK 241 AQ G+I+ LN H + + F+ L + +S NS+ Sbjct: 180 ESFILAQKGNINNQNGVFELNLYNGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYL 239 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 L + N N + +R +Q + +F L S+ + Sbjct: 240 QGTDYLGYWKKAFGKNANKNQK----------RRFSQAILVSLFPLASVFLIPLFGIANP 289 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL--MIKKKY 358 R K + + + + GV+ ++H I + + + + F++ +S L I K+Y Sbjct: 290 RFKTNWSYFYVLGAVGVY---FLMVHVISTDLFLMTFFFPFIWAFASYLLFRKFILKRY 345 >gi|297380268|gb|ADI35155.1| Hypothetical protein HPV225_1109 [Helicobacter pylori v225d] gi|308063875|gb|ADO05762.1| hypothetical protein HPSAT_05215 [Helicobacter pylori Sat464] Length = 345 Score = 99.6 bits (247), Expect = 7e-19, Method: Composition-based stats. Identities = 62/359 (17%), Positives = 135/359 (37%), Gaps = 19/359 (5%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + Y+ + + F L + FI+ ++ ++ ++ S L+++ Y +P + Sbjct: 2 IKHYLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFF 61 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 + P F L+ ++ + ELL+ + G S + K + L++L+S L + I+ P Sbjct: 62 ILPITFFAACALGLSRLSYDHELLVFFSLGVSPKKMTKAFVPLSLLVSAILLVFSLILIP 121 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 +S + + + F + D + + K NN+ + + ++ Sbjct: 122 TSKSAYYGFLRQ-KKDKIDINIRAGEFGQKLGDWLVYVDK-AENNSYDNLVLFSNKSLSQ 179 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL--QTESANSSTIVLK 241 AQ G+I+ LN H + + F+ L + +S NS+ Sbjct: 180 ESFILAQKGNINNQNGVFELNLYSGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYL 239 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 L + N N + +R +Q + +F L S+ + Sbjct: 240 QGTDYLGYWKKAFGKNANKNQK----------RRFSQAILVSLFPLASVFLIPLFGIANP 289 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL--MIKKKY 358 R K + + + + GV+ ++H I + + + + F++ S L I K+Y Sbjct: 290 RFKTNWSYFYVLGAVGVY---FLMVHVISTDLFLMTFFFPFIWAFISYLLFRKFILKRY 345 >gi|317180825|dbj|BAJ58611.1| hypothetical protein HPF32_1029 [Helicobacter pylori F32] Length = 345 Score = 99.6 bits (247), Expect = 7e-19, Method: Composition-based stats. Identities = 63/359 (17%), Positives = 136/359 (37%), Gaps = 19/359 (5%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + Y+ + + F L + FI+ ++ ++ ++ S L+++ Y +P + Sbjct: 2 IKHYLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFF 61 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 + P F L+ ++ + ELL+ + G S T+ K + L++L+S L + I+ P Sbjct: 62 ILPITFFAACALGLSRLSYDHELLVFFSLGVSPKTMTKAFVPLSLLVSAILLVFSLILIP 121 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 +S + + + F + D + + K NN+ + + ++ Sbjct: 122 TSKSAYYGFLRQ-KKDKIDINIRAGEFGQKLGDWLVYVDK-AENNSYDNLVLFSNKSLSQ 179 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL--QTESANSSTIVLK 241 AQ G+I+ LN H + + F+ L + +S NS+ Sbjct: 180 ESFILAQKGNINNQNGVFELNLYSGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYL 239 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 L + N N + +R +Q + +F L S+ + Sbjct: 240 QGTDYLGYWKKAFGKNANKNQK----------RRFSQAILVSLFPLASVFLIPLFGIANP 289 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL--MIKKKY 358 R K + + + + GV+ ++H I + + + + F++ S L I K+Y Sbjct: 290 RFKTNWSYFYVLGAVGVY---FLMVHVISTDLFLMTFFFPFIWAFISYLLFRKFILKRY 345 >gi|150007422|ref|YP_001302165.1| hypothetical protein BDI_0773 [Parabacteroides distasonis ATCC 8503] gi|256839671|ref|ZP_05545180.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|298375396|ref|ZP_06985353.1| membrane protein [Bacteroides sp. 3_1_19] gi|149935846|gb|ABR42543.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503] gi|256738601|gb|EEU51926.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|298267896|gb|EFI09552.1| membrane protein [Bacteroides sp. 3_1_19] Length = 361 Score = 99.6 bits (247), Expect = 7e-19, Method: Composition-based stats. Identities = 60/360 (16%), Positives = 126/360 (35%), Gaps = 10/360 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 +K + YI++ +++ + I+ I+ V I ++I+ + L I++ IP Sbjct: 5 LKRIDWYIIKQFLGTYVFAIALIISISVVFDINEKIDKFLNPDVPLKAIIVDYYLNFIPY 64 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + +E++ + +G S L+ P A +++I FI Sbjct: 65 FANLFSPLFTFIAVIFFTSKLADRSEIIAMLASGMSFRRLMLPYAVSATIIAIVTFILNA 124 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF-IVDS 178 I P T K Y++ ++ + Y+ + + F + Sbjct: 125 YIIPPANETRIDFQNKYIRNKKVDYVKNAQ-LEIEPGVIAYFDSYDARSNMGYRFSLEHF 183 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 D + A+S D Q + D + + + IS K TL ++ Sbjct: 184 EDKKLISRLTAKSIKYDSLYQ-WTVIDYMIRDFDGMREHISQGSRKDTTLTIVPSDFLIS 242 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 V L ++T++ E+HKR + I I + R + Sbjct: 243 VNDCETMTTPELNTYINRQKKRGIGNIQTFQIEYHKRFATIMAAFILTSIG-ASLSSRKI 301 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMIKK 356 I ++LS S + F + N Y P + ++ + I + + +K Sbjct: 302 KGGMGMNIGIGLALSFS---YILFMTVTSTFAINGYVSPAVAAWIPNIVYTFIAIFLYQK 358 >gi|313680813|ref|YP_004058552.1| permease yjgp/yjgq family protein [Oceanithermus profundus DSM 14977] gi|313153528|gb|ADR37379.1| permease YjgP/YjgQ family protein [Oceanithermus profundus DSM 14977] Length = 346 Score = 99.6 bits (247), Expect = 7e-19, Method: Composition-based stats. Identities = 47/282 (16%), Positives = 101/282 (35%), Gaps = 17/282 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+LR +G L +V + + + + + + + + + +P Sbjct: 1 MNTLSRYLLREVGAYLLGGLAVVVLLLLGGVLFEVLAPLLARGADPLSIGQYLAHRVPEA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + L+ M ++EL ++ +G R ++ ++ LL++ F++ Sbjct: 61 LVRGLPIAYLFALLLALSRMAEDSELKVLLASGIPRERVLGVLVGFGALLALVGFVAGES 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ Q+ +A LA + L+ FFR I + + + D R Sbjct: 121 WVPRELQRANQVLREAILAKPRALLQPGTFFRDAYGRTIYVGQVDGQG------FGDVRV 174 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ A+ G + R ++L+ G +I +F+ L E S Sbjct: 175 LSEGEVLTAKRGRFEPGR--LVLDAGMRVTFDGSRPR-TITEFERGLLPLEDLAVSPPT- 230 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSE---FHKRLTQW 279 K D L+ L + Y +E + ++ + Sbjct: 231 KPADLPLAELRRRIAEY----KKFGRPYHAEATAYWRKWAEP 268 >gi|110807998|ref|YP_691518.1| hypothetical protein SFV_4231 [Shigella flexneri 5 str. 8401] gi|110617546|gb|ABF06213.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401] Length = 360 Score = 99.3 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 54/361 (14%), Positives = 127/361 (35%), Gaps = 11/361 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + + I++ ++ + + + L + +P Sbjct: 5 GVLDRYIGKTI---FTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVP 61 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L + + +EL+++ +G +R+ + V+ AI L + Sbjct: 62 KDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIG 121 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-D 177 + P+ + A+A + ++ L+ + ++ ++ I + + L GI I Sbjct: 122 EWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNN-FVYIERVKGDEVLGGISIYAF 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + + YA + D + + L+ E +P S ++ Sbjct: 181 NENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTDLTPDKLG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + ++S L N + Y+ ++ Q L + L+++ Sbjct: 241 VVALDPDALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 IS F V F + P +L F + S++LLM K Sbjct: 300 LRSVPMGVRVITGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRK 359 Query: 356 K 356 Sbjct: 360 S 360 >gi|281603538|gb|ADA76522.1| Inner membrane protein yjgQ [Shigella flexneri 2002017] Length = 361 Score = 99.3 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 54/361 (14%), Positives = 127/361 (35%), Gaps = 11/361 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + + I++ ++ + + + L + +P Sbjct: 6 GVLDRYIGKTI---FTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVP 62 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L + + +EL+++ +G +R+ + V+ AI L + Sbjct: 63 KDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIG 122 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-D 177 + P+ + A+A + ++ L+ + ++ ++ I + + L GI I Sbjct: 123 EWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNN-FVYIERVKGDEVLGGISIYAF 181 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + + YA + D + + L+ E +P S ++ Sbjct: 182 NENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTDLTPDKLG 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + ++S L N + Y+ ++ Q L + L+++ Sbjct: 242 VVALDPDALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGP 300 Query: 297 ALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 IS F V F + P +L F + S++LLM K Sbjct: 301 LRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRK 360 Query: 356 K 356 Sbjct: 361 S 361 >gi|15804854|ref|NP_290895.1| hypothetical protein Z5874 [Escherichia coli O157:H7 EDL933] gi|26251171|ref|NP_757211.1| hypothetical protein c5363 [Escherichia coli CFT073] gi|254037286|ref|ZP_04871363.1| conserved hypothetical protein [Escherichia sp. 1_1_43] gi|291285674|ref|YP_003502492.1| Inner membrane protein yjgQ [Escherichia coli O55:H7 str. CB9615] gi|332281055|ref|ZP_08393468.1| conserved hypothetical protein [Shigella sp. D9] gi|12519274|gb|AAG59461.1|AE005658_3 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933] gi|26111603|gb|AAN83785.1|AE016771_296 Hypothetical protein yjgQ [Escherichia coli CFT073] gi|537104|gb|AAA97159.1| ORF_o361 [Escherichia coli str. K-12 substr. MG1655] gi|13364717|dbj|BAB38662.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai] gi|209749438|gb|ACI73026.1| hypothetical protein ECs5239 [Escherichia coli] gi|209749440|gb|ACI73027.1| hypothetical protein ECs5239 [Escherichia coli] gi|209749442|gb|ACI73028.1| hypothetical protein ECs5239 [Escherichia coli] gi|209749444|gb|ACI73029.1| hypothetical protein ECs5239 [Escherichia coli] gi|209749446|gb|ACI73030.1| hypothetical protein ECs5239 [Escherichia coli] gi|226840392|gb|EEH72394.1| conserved hypothetical protein [Escherichia sp. 1_1_43] gi|290765547|gb|ADD59508.1| Inner membrane protein yjgQ [Escherichia coli O55:H7 str. CB9615] gi|332103407|gb|EGJ06753.1| conserved hypothetical protein [Shigella sp. D9] Length = 361 Score = 99.3 bits (246), Expect = 8e-19, Method: Composition-based stats. Identities = 54/361 (14%), Positives = 127/361 (35%), Gaps = 11/361 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + + I++ ++ + + + L + +P Sbjct: 6 GVLDRYIGKTI---FTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVP 62 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L + + +EL+++ +G +R+ + V+ AI L + Sbjct: 63 KDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIG 122 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-D 177 + P+ + A+A + ++ L+ + ++ ++ I + + L GI I Sbjct: 123 EWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNN-FVYIERVKGDEELGGISIYAF 181 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + + YA + D + + L+ E +P S ++ Sbjct: 182 NENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLG 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + ++S L N + Y+ ++ Q L + L+++ Sbjct: 242 VVALDPDALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGP 300 Query: 297 ALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 IS F V F + P +L F + S++LLM K Sbjct: 301 LRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRK 360 Query: 356 K 356 Sbjct: 361 S 361 >gi|304396397|ref|ZP_07378278.1| permease YjgP/YjgQ family protein [Pantoea sp. aB] gi|304355906|gb|EFM20272.1| permease YjgP/YjgQ family protein [Pantoea sp. aB] Length = 358 Score = 99.3 bits (246), Expect = 8e-19, Method: Composition-based stats. Identities = 53/360 (14%), Positives = 131/360 (36%), Gaps = 9/360 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + YI + I + +++ +V ++ +I+ + ++ + S + +P + Sbjct: 3 RVLDRYIGKTIFNTIMLTLFMLVSLSGIIKFVDQLRKTGQGSYSALSAGYYTLLSVPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ + +EL+++ G +R+ + V+ AI L + + Sbjct: 63 EIFFPMAALLGALLGLGALAQRSELVVMQAAGFTRMQVALSVMKTAIPLVLLTMAIGEFV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + A+ + L+ + D + +I I + +N + G+ I + D Sbjct: 123 APSGEQMARNYRAQQLYGGALVSTQNGLWAK-DGNSFIYIERIKGDNEIDGVSIYNFNDQ 181 Query: 182 QT-HKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + YA + + D D++ +L+ E + P S + + Sbjct: 182 RRLQSVRYAATATWDKDKKRWLLSQVDESNLTDPKQITGSQSLSGEWKTNLTPDKLGVVA 241 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L + ++ L + + Y ++ Q L + L+++ + Sbjct: 242 LDPDALSIRGL-HSYSKYLKQSGQEAGRYELNMWSKIFQPLSVAVMMLMALSFIFGP--L 298 Query: 300 RQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R + +S F + F + P IL F F S+F+L+ ++ Sbjct: 299 RSVSMGVRVVTGISFGFLFYVLDQIFGPLSLVYGLPPILGAILPSFAFFAISMFMLIKRR 358 >gi|304382916|ref|ZP_07365398.1| conserved hypothetical protein [Prevotella marshii DSM 16973] gi|304335941|gb|EFM02189.1| conserved hypothetical protein [Prevotella marshii DSM 16973] Length = 402 Score = 99.3 bits (246), Expect = 8e-19, Method: Composition-based stats. Identities = 60/364 (16%), Positives = 132/364 (36%), Gaps = 14/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 +K + YI+R +++ + I+ I+ V + + + S L I+ +P Sbjct: 42 IKRLDRYIIRKFIGTYIFAIALIISISIVFDVNENLAKFSEYKAPLKAIVFDYYMNFVPY 101 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + G S LI+P +F +L+S F Sbjct: 102 FANLFSPLFVFIAVIFFTSKLAGNSEIISMLAAGISFRRLIRPYMFSCVLISGLSFYLSA 161 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQ---GIFIV 176 + P + I+Q + EN+ ++ + + Y +NT++ G + Sbjct: 162 YVIPHG-TVIRQNFETLYKNKKKNTSAENVQLQVGKGVIAYMKLY--DNTIKKGYGFCLY 218 Query: 177 DSRDTQTHKIYYAQS---GSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 + + A +I + D ++ + + + I+ K LQ E Sbjct: 219 KFENKKLVSHMTASEIQYDTISDSKYHWKAMDWKIRQLRGLREKITSGITKDTVLQMEPT 278 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + + LL+ + + Y+ E+HKR+ I +I + + Sbjct: 279 DLVYSKGQQETFTSPQLLDYISKQIDRGSGNVVQYQVEYHKRIASSFASFILTIIGVSLS 338 Query: 294 DKRALVRQRKKIHPIFISLSISFG-VFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 ++ R+ + I L++SFG + I N I +L + + Sbjct: 339 SRK---RKGGMGLYLGIGLALSFGYIMLQTVSSTFAINANTPPILAAWLPNIIFAFVAYF 395 Query: 353 MIKK 356 +K Sbjct: 396 CYRK 399 >gi|120553895|ref|YP_958246.1| permease YjgP/YjgQ family protein [Marinobacter aquaeolei VT8] gi|120323744|gb|ABM18059.1| permease YjgP/YjgQ family protein [Marinobacter aquaeolei VT8] Length = 353 Score = 99.3 bits (246), Expect = 8e-19, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 121/358 (33%), Gaps = 8/358 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y++R +G + + + ++ + + + + + ++L L +P Sbjct: 1 MHKIDGYVMRTVGGAMFLVMVVVLSLDVIFAFIAELEDTRNEYQTLQA-LWYVALTLPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P M L SM ++EL +I G S ++ + A+++ + Sbjct: 60 IYDYLPLGAFMGCLVGLGSMASSSELTVIRAAGVSLKRIVWSAMKPALIVVLLGVAIGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + A A A + E ++ + + ++ ++ PN L G+ + D Sbjct: 120 VAPTTERIAQSDKAVALGAGSSVASAEGVW-HREGNTFMHLNAVQPNGVLHGVSLFRFDD 178 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 Q +A+ D +L + R P + + + S ++ Sbjct: 179 ARQLQVASFAERAIYQGD--YWLLENVTSTRIEPERTVRDVSASLRWETGLSPSVLSVLI 236 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 +K + +++ L + Y F K+ L + L++I + Sbjct: 237 VKPENLSMTGLYT-YAAYLGEQGLSAAQYWLAFWKKALMPLGTAVMVLVAISFVFGP--L 293 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 R +F L + + + + I L ++ I ++ ++ Sbjct: 294 RSVTMGFRVFTGLLVGLLFKYMQDLLGPMSMVYGFNPLIAVLAPIVVNGIVGAVLMRR 351 >gi|261838424|gb|ACX98190.1| integral membrane protein [Helicobacter pylori 51] Length = 345 Score = 99.3 bits (246), Expect = 8e-19, Method: Composition-based stats. Identities = 63/359 (17%), Positives = 137/359 (38%), Gaps = 19/359 (5%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + Y+ + + F L + FI+ ++ ++ ++ S L+++ Y +P + Sbjct: 2 IKHYLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFF 61 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 + P F L+ ++ + ELL+ + G S T+ K + L++L+S L + I+ P Sbjct: 62 ILPITFFAACALGLSRLSYDHELLVFFSLGVSPKTMTKAFVPLSLLVSAILLVFSLILIP 121 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 +S + + + F + D + + K NN+ + + ++ Sbjct: 122 TSKSAYYGFLRQ-KKDKIDINIRAGEFGQKLGDWLVYVDK-AENNSYDNLVLFSNKSLSQ 179 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL--QTESANSSTIVLK 241 AQ G+I+ LN + H + + F+ L + +S NS+ Sbjct: 180 ESFILAQKGNINNQNGVFELNLYKGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYL 239 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 L + N N + +R +Q + +F L S+ + Sbjct: 240 QGTDYLGYWKKAFGKNANKNQK----------RRFSQAILVSLFPLASVFLIPLFGIANP 289 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL--MIKKKY 358 R K + + + + GV+ ++H I + + + + F++ S L I K+Y Sbjct: 290 RFKTNWSYFYVLGAVGVY---FLMVHVISTDLFLMTFFFPFIWAFVSYLLFRKFILKRY 345 >gi|242310520|ref|ZP_04809675.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] gi|239522918|gb|EEQ62784.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] Length = 341 Score = 99.3 bits (246), Expect = 8e-19, Method: Composition-based stats. Identities = 57/326 (17%), Positives = 120/326 (36%), Gaps = 17/326 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y+ + F + L + FIA V+ ++ + S LL + Y +P +L Sbjct: 2 RIKNYLFHSFSQIFFPTFLVLFFIASVVIFIRIAGVTFVVQISFLELLSLYFYTLPLMLF 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 V P F + L+ ++ + EL ++ G S +IK +A+L SI LFI I+ Sbjct: 62 FVIPLSFFVACALSLSRLSFDYELPVLFALGMSPNKIIKIFFPIALLASISLFILSLILT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +Q + + L+ F + + + + + + + + + I ++ + Sbjct: 122 PLSDLAYRQFLEE-RKNSININLQAGEFGQKLGNWLVYVKENHEDMSYKDIVLLSF--GK 178 Query: 183 THKIYYAQSGSIDLDRQAI--ILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + +A+ I + IL++G+++R P I + FK+ L+ + S L Sbjct: 179 EGGLIFAKDAKIINKDGVMEAILDNGKIYR--PDENAIEKIAFKTLILRNSITDISGQNL 236 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVI-FGLISIVAADKRALV 299 + + R + S LFP + ++ Sbjct: 237 GVFEYWNRAFYENDRQRKTLRDLSMYVLMS---------LFPFVSLYFFPLLGVKNPRYQ 287 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYI 325 R + + I + +Y+ Sbjct: 288 RNHTILQSMLIIGVFYALTYLVANYL 313 >gi|237807324|ref|YP_002891764.1| permease YjgP/YjgQ family protein [Tolumonas auensis DSM 9187] gi|237499585|gb|ACQ92178.1| permease YjgP/YjgQ family protein [Tolumonas auensis DSM 9187] Length = 356 Score = 99.3 bits (246), Expect = 8e-19, Method: Composition-based stats. Identities = 47/362 (12%), Positives = 124/362 (34%), Gaps = 16/362 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y+ R + + LM + +V ++ +I+ + ++ V + + + Y IP Sbjct: 3 GILDRYVGRTVIMAILMCTVMLVGLSSLIKFVDQLQNVGEGSFTTFHAILRVLYAIPGDT 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L + ++EL+++ G SR ++ L I + + + + Sbjct: 63 VLFFPMAALLGGVIGLGQLASSSELVVLQAAGLSRAKIVISALKTVIPVMFLIMLLGEYV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + A + ++ + D +I I + +L+G+ + + Sbjct: 123 APIAEQKAHDIKTSAISGGKITASTYGIWVKEGHD-FISIDTLFRDGSLRGVTLY-RFNL 180 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT-----LQTESANSS 236 +S +QA L D + + +KFK+ T Sbjct: 181 NGELQEVIRSAMAVYQQQAWHLKDIVITQLQDK----QQIKFKNLTDWVWKTNLTPDKLG 236 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAAD 294 + + ++ + L N + + ++ Y EF ++L + + L++ + Sbjct: 237 VVSVSPDELSAQGLYN-YISYMKSNGQQVDDYELEFWRKLLAPVSVIAMLLLAASTIFGP 295 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R++ + I + + + + + P I L + ++ Sbjct: 296 LRSVSMGARLISGVMMGFAFFVANQVLGPF--SLVYNVPPVIGASVPSLIFMGVAIYMLQ 353 Query: 355 KK 356 ++ Sbjct: 354 RR 355 >gi|187731850|ref|YP_001882954.1| putative permease [Shigella boydii CDC 3083-94] gi|187428842|gb|ACD08116.1| putative permease [Shigella boydii CDC 3083-94] Length = 360 Score = 99.3 bits (246), Expect = 9e-19, Method: Composition-based stats. Identities = 54/361 (14%), Positives = 126/361 (34%), Gaps = 11/361 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + + I++ ++ + + + L + +P Sbjct: 5 GVLDRYIGKTI---FTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVP 61 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + P + L + + +EL+++ +G +R+ + V+ AI L + Sbjct: 62 KDVQTFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIG 121 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-D 177 + P+ + A+A + ++ L+ + ++ ++ I + + L GI I Sbjct: 122 EWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNN-FVYIERVKGDEELGGISIYAF 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + + YA + D + + L+ E +P S ++ Sbjct: 181 NENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + ++S L N + Y+ ++ Q L + L+++ Sbjct: 241 VVALDPDALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 IS F V F + P +L F + S++LLM K Sbjct: 300 LRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRK 359 Query: 356 K 356 Sbjct: 360 S 360 >gi|308184829|ref|YP_003928962.1| hypothetical protein HPSJM_05385 [Helicobacter pylori SJM180] gi|308060749|gb|ADO02645.1| hypothetical protein HPSJM_05385 [Helicobacter pylori SJM180] Length = 345 Score = 99.3 bits (246), Expect = 9e-19, Method: Composition-based stats. Identities = 62/359 (17%), Positives = 137/359 (38%), Gaps = 19/359 (5%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + Y+ + + F L + FI+ ++ ++ ++ S L+++ Y +P + Sbjct: 2 IKHYLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFF 61 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 + P F L+ ++ + ELL+ + G S T+ K + L++L+S L + I+ P Sbjct: 62 ILPITFFAACALGLSRLSYDHELLVFFSLGVSPKTMTKAFVPLSLLVSAILLVFSLILIP 121 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 +S + + + F + D + + K NN+ + + ++ Sbjct: 122 TSKSAYYGFLRQ-KKDKIDINIRAGEFGQKLGDWLVYVDK-AENNSYDNLVLFSNKSLSQ 179 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL--QTESANSSTIVLK 241 AQ G+I+ LN + H + + F+ L + +S NS+ Sbjct: 180 ESFILAQKGNINNQNGVFELNLYKGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYL 239 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 L + N N + +R +Q + +F L S+ + Sbjct: 240 QGTDYLGYWKKAFGKNANKNQK----------RRFSQAILVSLFPLASVFLIPLFGIANP 289 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL--MIKKKY 358 R K + + + + G++ ++H I + + + + F++ S L I K+Y Sbjct: 290 RFKTNWSYFYVLGAVGIY---FLMVHVISTDLFLMTFFFPFIWAFISYLLFRKFILKRY 345 >gi|301028101|ref|ZP_07191379.1| putative inner membrane protein [Escherichia coli MS 196-1] gi|299878818|gb|EFI87029.1| putative inner membrane protein [Escherichia coli MS 196-1] Length = 360 Score = 99.3 bits (246), Expect = 9e-19, Method: Composition-based stats. Identities = 54/361 (14%), Positives = 127/361 (35%), Gaps = 11/361 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + + I++ ++ + + + L + +P Sbjct: 5 GVLDRYIGKTI---FTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVP 61 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L + + +EL+++ +G +R+ + V+ AI L + Sbjct: 62 KDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIG 121 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-D 177 + P+ + A+A + ++ L+ + ++ ++ I + + L GI I Sbjct: 122 EWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNN-FVYIERVKGDEELGGISIYAF 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + + YA + D + + L+ E +P S ++ Sbjct: 181 NENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + ++S L N + Y+ ++ Q L + L+++ Sbjct: 241 VVALDPDALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVVMLMALSFIFGP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 IS F V F + P +L F + S++LLM K Sbjct: 300 LRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRK 359 Query: 356 K 356 Sbjct: 360 S 360 >gi|332879242|ref|ZP_08446939.1| permease, YjgP/YjgQ family [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332682662|gb|EGJ55562.1| permease, YjgP/YjgQ family [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 368 Score = 99.3 bits (246), Expect = 9e-19, Method: Composition-based stats. Identities = 57/374 (15%), Positives = 135/374 (36%), Gaps = 34/374 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 + ++Y+++ ++ S I+ IA V + I+ +++ I+ + +P Sbjct: 8 ISKLDMYLIKKFLGTYFFSIALIISIAVVFDFNENIDKFTTNHAPWKGIIFEYYANFVPY 67 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + G S L++P + A ++++ F+ Sbjct: 68 FSNLFSPLFVFISVIFFTSKLAENSEIIAMMAAGMSFKRLMRPYMISAAIIAVMTFLLGA 127 Query: 120 IIEPKC---RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + PK R + + K + ++ ++D + I ++ F + Sbjct: 128 YVIPKGSVTRLNFENIYKKKKKTEFAQNVQ----LQVDTGVIAFIEHFDGRTKTGYHFSL 183 Query: 177 DS-RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 D + + A S S D L+D E + + + +K + S Sbjct: 184 DKFVNKKLVSHLTAASVSYDT------LSD-ERYHWRINNYTLRELKGMREYISHGSRID 236 Query: 236 STIVLKANDQNLS-----FLLNPNPNNPNYRPELLET-----YRSEFHKRLTQWLFPVIF 285 S I ++ +D L+ L +P + + + E+ KR I Sbjct: 237 SIIAMEPSDFLLTRNQQETLTSPELKEYIVKQRARGSGNVKPFEVEYQKRFATPFASFIL 296 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISF-GVFWGFSYIIHKIEQNPYYIPIL--YLF 342 +I + R+RK +++ + ++ + F + N + P L +L Sbjct: 297 TIIGLSL-----SARKRKGGMGLYLGIGLALSASYILFQTVSSTFAINADWPPALAAWLP 351 Query: 343 LFCISSIFLLMIKK 356 + I + KK Sbjct: 352 NIIFAFIAFFLYKK 365 >gi|312959169|ref|ZP_07773688.1| membrane protein [Pseudomonas fluorescens WH6] gi|311286939|gb|EFQ65501.1| membrane protein [Pseudomonas fluorescens WH6] Length = 359 Score = 99.3 bits (246), Expect = 9e-19, Method: Composition-based stats. Identities = 53/364 (14%), Positives = 130/364 (35%), Gaps = 14/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + L I+ +A + ++ + + + T ++ +L P Sbjct: 1 MVKLDRYIGSSVLIAILAVLGIIIGLASLFAMVDEMKSI-NDTYTVWNVLNYVLLTAPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L S+ N+EL I+ G S ++ V+ +LL + + Sbjct: 60 LYEMMPMAALIGCLIGLGSLASNSELTIMRAAGVSIGRIVWAVMKPMLLLMVCSVLIGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF-IVDSR 179 + P +T + A AQ + + L+ D +I I+ P L G+ + Sbjct: 120 VAPPAEATAQANRALAQGSGDAQSAKHGLW-HRQGDEFIHINAVQPGGLLIGVTRYRFDK 178 Query: 180 DTQTHKIYYAQSGSIDLDRQAI----ILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + +A+S ++ + V + + S ++ + + + + + Sbjct: 179 ERHMLSSSFAKSAQYSNEKWQLTDITTTYFRNVGQGTQASTEVINVPSEEWGISLKPELL 238 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWL--FPVIFGLISIVAA 293 +T+V+ +S L + + + Y F ++ Q + ++ IS V Sbjct: 239 NTVVMIPESLPISGLWS-YIHYLKDQGLNNGRYWLAFWVKVLQPVVTAALVLMAISFVFG 297 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 R++ ++ +F + + F + + + L I ++ Sbjct: 298 PLRSVTLGQR----VFTGVLVGFIFQIAQNLLGPLSLVFGFSPLFAVLVPTTICALAGFW 353 Query: 354 IKKK 357 + ++ Sbjct: 354 LLRR 357 >gi|307637757|gb|ADN80207.1| integral membrane protein [Helicobacter pylori 908] Length = 345 Score = 99.3 bits (246), Expect = 9e-19, Method: Composition-based stats. Identities = 63/357 (17%), Positives = 135/357 (37%), Gaps = 19/357 (5%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ + + F L + FI+ ++ ++ ++ S L+++ Y +P + + Sbjct: 4 HYLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFIL 63 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P F L+ ++ + ELL+ + G S T+ K + L++L+S L + I+ P Sbjct: 64 PITFFAACALGLSRLSYDHELLVFFSLGVSPKTMTKAFVPLSLLVSAILLVFSLILIPTS 123 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHK 185 +S + + + F + D + + K NN+ + + ++ Sbjct: 124 KSAYYGFLRQ-KKDKIDINIRAGEFGQKLGDWLVYVDK-AENNSYDNLVLFSNKSLSQES 181 Query: 186 IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL--QTESANSSTIVLKAN 243 AQ G+I+ LN H + + F+ L + +S NS+ Sbjct: 182 FILAQKGNINNQNGVFELNLYNGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDATYLQG 241 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 L + N N + +R +Q + +F L S+ + R Sbjct: 242 TDYLGYWKKAFGKNANKNQK----------RRFSQAILVSLFPLASVFLIPLFGIANPRF 291 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL--MIKKKY 358 K + + + + GV+ ++H I + + + + F++ S L I K+Y Sbjct: 292 KTNWSYFYVLGAVGVY---FLMVHVISTDLFLMTFFFPFIWAFISYLLFRKFILKRY 345 >gi|161505032|ref|YP_001572144.1| hypothetical protein SARI_03163 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160866379|gb|ABX23002.1| hypothetical protein SARI_03163 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 360 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 53/363 (14%), Positives = 124/363 (34%), Gaps = 14/363 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + + I++ ++ + + + L + +P Sbjct: 5 GVLDRYIGKTI---FTTIMMTLFMLVSLSGIIKFVDQLKKAGQGNYDALGAGMYTLLSVP 61 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L + + +EL+++ +G +R+ + V+ AI L + Sbjct: 62 KDIQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIG 121 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-- 176 + P+ + A+A + ++ L+ + ++ ++ I + + L GI I Sbjct: 122 EWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNN-FVYIERVKGDEELAGISIYAF 180 Query: 177 -DSRDTQTHKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESAN 234 D R + + YA S D + + L+ E ++P S ++ Sbjct: 181 NDQR--RLQSVRYAASAKFDPEHKVWRLSQVDESDLQNPKQITGSQTVSGTWKTDLTPDK 238 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + L + ++S L N + Y+ ++ Q L + L+++ Sbjct: 239 LGVVALDPDALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIF 297 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 IS F V + + P + L LM+ Sbjct: 298 GPLRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIVGALLPSASFFLISLWLML 357 Query: 355 KKK 357 +K Sbjct: 358 RKS 360 >gi|225024724|ref|ZP_03713916.1| hypothetical protein EIKCOROL_01610 [Eikenella corrodens ATCC 23834] gi|224942519|gb|EEG23728.1| hypothetical protein EIKCOROL_01610 [Eikenella corrodens ATCC 23834] Length = 356 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 48/364 (13%), Positives = 124/364 (34%), Gaps = 12/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y++R +G + L + L +V + +++ ++ V ++ L+ G + Sbjct: 1 MKLLTRYLIRRLGTATLYALLALVVLFSFFEVINAVDDVGDGNYTVLTLILYVGMRLFGH 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + L+ + +E +I +G S +I V + +L + Sbjct: 61 MYTLLPLAVLIGCLAALSQLASASEWTVIRTSGASLKRIIATVASVGLLAGLLGVALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-DSR 179 + P ++L A F + D+ I + + P+ L GI I ++ Sbjct: 121 VAPYMEQRAERLRLHAVQQTVSLGGSGLWFRQGSDN--INVREMLPDGRLLGIRIYRYNQ 178 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + A G ++ + L + + + ++ Sbjct: 179 HAALESAWQASEGRVNGNGT-WTLKQVARTHIAAERTQTEQLASVEWPSDVGVELLGVLL 237 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + + + L ++ + Y + + ++L L + L+++ Sbjct: 238 VDTDQMSARSL-KMYIDHLQSNGQQTAAYATVWWRKLLYPLICTVMALVALAF--TPQSS 294 Query: 300 RQRKKIHPIFISLSISFGVFWGFS---YIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R +F+ + + + Y+ P+ IL +F I++ +I++ Sbjct: 295 RHGNIGVRLFLGICLGLAFHFAGLLSGYVAQLSSMPPFGAAILPGTVFAIAAA--WLIRR 352 Query: 357 KYTK 360 + + Sbjct: 353 QEVR 356 >gi|227114630|ref|ZP_03828286.1| putative permease [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|227327172|ref|ZP_03831196.1| putative permease [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 358 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 53/360 (14%), Positives = 124/360 (34%), Gaps = 9/360 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI + I + + + +V ++ +I+ + ++ V S + +P + Sbjct: 3 GVLDRYIGKTIFTTIMTTLFMLVSLSGIIKFVDQLRKVGQGEYSALGAGLYTLLSVPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L + +EL+++ +G +R+ + V+ AI L + + Sbjct: 63 EIFFPMAALLGALLGLGQLATRSELVVMQASGFTRLQIATAVMKTAIPLVLLTMAIGEWV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + ++ + + L+ + +D +I I + + L G+ I D Sbjct: 123 SPQGEQMARNYRSQMISGGSMISTQGGLWAKDGND-FIYIERVTGDKELSGVNIYHFDDK 181 Query: 182 QTHKIY-YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK-SYTLQTESANSSTIV 239 YA S + DR L+ + S + F + + Sbjct: 182 NKLLSVRYAASAEFEDDRNVWKLSQVDESDLSDGKQIGGSQTFSGEWKTNLTPDKLGVVA 241 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L+ + ++ L N + Y+ ++ + + L+++ + Sbjct: 242 LEPDALSIRGLHN-YAKYLKQSGQESNRYQLNMWSKIFAPVSVAVMMLMAVSFIFGP--L 298 Query: 300 RQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R I I +S F + F + P IL +F S+ LL+ ++ Sbjct: 299 RSVSAGSRIVIGISFGFLFYLLNEIFRPLSLVYGIPPILGAILPSSVFLFISVALLLKRR 358 >gi|317177843|dbj|BAJ55632.1| hypothetical protein HPF16_1035 [Helicobacter pylori F16] Length = 345 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 63/359 (17%), Positives = 135/359 (37%), Gaps = 19/359 (5%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + Y+ + + F L + FI+ ++ ++ ++ S L+++ Y +P + Sbjct: 2 IKHYLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFF 61 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 + P F L+ ++ + ELL+ + G S + K + L++L+S L + I+ P Sbjct: 62 ILPITFFAACALGLSRLSYDHELLVFFSLGVSPKKMTKAFVPLSLLVSAILLVFSLILIP 121 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 +S + + + F + D + + K NN+ + + S+ Sbjct: 122 TSKSAYYGFLRQ-KKDKIDINIRAGEFGQKLGDWLVYVDK-AENNSYDNLVLFSSKSLSQ 179 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL--QTESANSSTIVLK 241 AQ G+I+ LN H + + F+ L + +S NS+ Sbjct: 180 ESFILAQKGNINNQNGVFELNLYSGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYL 239 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 L + N N + +R +Q + +F L S+ + Sbjct: 240 QGTDYLGYWEKAFGKNANKNQK----------RRFSQAILVSLFPLASVFLIPLFGIANP 289 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL--MIKKKY 358 R K + + + + GV+ ++H I + + + + F++ S L I K+Y Sbjct: 290 RFKTNWSYFYVLGAVGVY---FLMVHVISTDLFLMTFFFPFIWAFISYLLFRKFILKRY 345 >gi|114776388|ref|ZP_01451433.1| hypothetical protein SPV1_01672 [Mariprofundus ferrooxydans PV-1] gi|114553218|gb|EAU55616.1| hypothetical protein SPV1_01672 [Mariprofundus ferrooxydans PV-1] Length = 352 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 50/362 (13%), Positives = 129/362 (35%), Gaps = 14/362 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M +I L++ ++ I +I+ + + ++++ IP + Sbjct: 1 MPVVFRWIFSGCLSRSLVTMSALLAIFVIIESFDKARYL-GHGLDGRLMVEYMLLKIPFM 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + + L ++RN E++ + G ++ P+ +A+L ++ FI Sbjct: 60 LSEFMPVIMLIGASLYLIELSRNQEVVALRAAGLGINKVLLPLSSVALLAALASFIIGEW 119 Query: 121 IEPKCRSTIKQLSA-KAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P + + Q+ Q + + + L D N+ + + + Sbjct: 120 VTPVTNTRLDQIEQVHIQHKKSS---QPGV-QWLKDGHRFFRLTPLTNHQFALLMLKTAP 175 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 D + + + L+D V + + + K K+ +++ + + Sbjct: 176 DGAWLQRIDSPRAHY--SQGVWSLSDARV-STPSSDQVMHVEKLKNMEVKSAIGPETADL 232 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 K + S L + NN + TY H++ + L ++ +++ A Sbjct: 233 PKPGHMDFSELYH-YINNLKHAGLGAGTYVYALHRKFSAPLACLLMVIMA-AALCLHTGN 290 Query: 300 RQRKKIHPIFISLSISFGVFW---GFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R + + +S+S+ + + P + L +F +++FLL+ ++ Sbjct: 291 RNSRASWGLMLSISLGLVFYVIGNAGYLLAASNRIPPAFAAWLPSLVFGGTAVFLLLKRE 350 Query: 357 KY 358 + Sbjct: 351 GH 352 >gi|188527872|ref|YP_001910559.1| hypothetical protein HPSH_05605 [Helicobacter pylori Shi470] gi|188144112|gb|ACD48529.1| hypothetical protein HPSH_05605 [Helicobacter pylori Shi470] Length = 345 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 62/359 (17%), Positives = 136/359 (37%), Gaps = 19/359 (5%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + Y+ + + F L + FI+ ++ ++ ++ S L+++ Y +P + Sbjct: 2 IKHYLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFF 61 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 + P F L+ ++ + ELL+ + G S + K + L++L+S L + I+ P Sbjct: 62 ILPITFFAACALGLSRLSYDHELLVFFSLGVSPKKMTKAFVPLSLLVSAILLVFSLILIP 121 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 +S + + + F + D + + K NN+ + + ++ Sbjct: 122 TSKSAYYGFLRQ-KKDKIDINIRAGEFGQKLGDWLVYVDK-AENNSYDNLVLFSNKSLSQ 179 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL--QTESANSSTIVLK 241 AQ G+I+ LN H + + F+ L + +S NS+ Sbjct: 180 ESFILAQKGNINNQNGVFELNLYSGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYL 239 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 L + N N + +R +Q + +F L S+ + Sbjct: 240 QGTDYLGYWKKAFGKNANKNQK----------RRFSQAILVSLFPLASVFLIPLFGIANP 289 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL--MIKKKY 358 R K + + + + GV+ ++H I + + + + F++ S L +I K+Y Sbjct: 290 RFKTNWSYFYVLGAVGVY---FLMVHVISTDLFLMTFFFPFIWAFVSYLLFRKIILKRY 345 >gi|332828499|gb|EGK01199.1| hypothetical protein HMPREF9455_02391 [Dysgonomonas gadei ATCC BAA-286] Length = 684 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 85/215 (39%), Gaps = 4/215 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K ++++ F M+ + +FI + + + + + +++L ++ Y + Sbjct: 4 IKRLYTFVIQTFLPVFAMTFVICLFIVLMQFLWRYVEDLVGKGLDISVLAELFLYAAFQL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +PM P + + ++ ELL I +G S + +KP++ L +SI F +N Sbjct: 64 IPMALPLSLLLASLMAFGNLGERLELLSIKASGVSLLKAMKPLIILVAFISIGAFFFQNE 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 P+ + ++ L + + E F+ + + + K N L + I D+ Sbjct: 124 AMPRIQVKLRALLWSIKQKSPELDIPEGSFYSDIPNYNLYVKKKNRETKMLHEVMIYDTS 183 Query: 180 DT-QTHKIYYAQSGSID--LDRQAIILNDGEVHRK 211 + S + D+ ++LN + Sbjct: 184 KGFDNMAVIVCDSALMRGSEDKTFLLLNLYHGQQF 218 Score = 39.6 bits (91), Expect = 0.77, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 45/99 (45%), Gaps = 6/99 (6%) Query: 262 PELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWG 321 + + + E H++ T +IF I A A++R+ P+ +S+++ F V++ Sbjct: 383 QKNIRFHEVERHRKFTLSFACLIFFFIG---APLGAIIRKGGLGMPVVVSVAL-FIVYYI 438 Query: 322 FSYIIHKIEQNPYY--IPILYLFLFCISSIFLLMIKKKY 358 I +K+ ++ + ++L F + + + + K Sbjct: 439 IDNIGYKMARDGVWEAWQGMWLSSFALFPLGVFLTYKAM 477 >gi|86158886|ref|YP_465671.1| permease YjgP/YjgQ [Anaeromyxobacter dehalogenans 2CP-C] gi|85775397|gb|ABC82234.1| permease YjgP/YjgQ [Anaeromyxobacter dehalogenans 2CP-C] Length = 360 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 55/349 (15%), Positives = 117/349 (33%), Gaps = 17/349 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + +FL++ +V I + + + + L +L++ Y V+ Sbjct: 2 ILFRYVARRMLGAFLVALAGVVGIYLAVDFVDNAAAYTGAGW-LPAVLQLYAYKAAGVVY 60 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 MV P + + + E + G L PVL + +L L + +++ Sbjct: 61 MVAPAALILGAGIATSMFRQTREYTAMRAVGLGPWRLAVPVLAVTLLAGGVLVVLNDVVG 120 Query: 123 PKCRSTIKQLSA--KAQLALTFSYL---EENLFFRLDDDLYIK-ISKYNPNNTLQGIFIV 176 + ++++A A+ +L E +FR D + + P+ + + + Sbjct: 121 VQAAERAEEITAHRFARGGNLRRFLAAREPKRWFRGVDGKRVYHLRGNLPDGGFERVTVY 180 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-DISIMKFKSYTLQTESANS 235 + + + + D +A IL D E P + + K Y Sbjct: 181 ELSEA-FTLARRIDAARMHPDGRAWILEDVEDRTFRPDGSMALERAERKRYAFDEPPDAF 239 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + I K + S L+ + + ++ E + RL F I Sbjct: 240 AVIAGKPDQMRWSTLIRQ-IGIRKRLGQPVTEFQLERYDRLAYP-----FAGIPGALLAL 293 Query: 296 RALVRQRKKIHPIFISLSISF--GVFWGFSYIIHKIEQNPYYIPILYLF 342 +R+ +K H L +FWG + + + P + + Sbjct: 294 ALALRRDRKGHLSAALLEAVGVTLLFWGMQGVSSALGLSGRVAPWVASW 342 >gi|15612083|ref|NP_223735.1| hypothetical protein jhp1018 [Helicobacter pylori J99] gi|4155611|gb|AAD06602.1| putative [Helicobacter pylori J99] Length = 345 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 62/357 (17%), Positives = 133/357 (37%), Gaps = 19/357 (5%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ + + F L + FI+ ++ ++ ++ S L+++ Y +P + + Sbjct: 4 HYLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFIL 63 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P F L+ ++ + ELL+ + G S + K + L++L+S L I+ P Sbjct: 64 PITFFAACALGLSRLSYDHELLVFFSLGVSPKKMTKAFVPLSLLVSAILLAFSLILIPTS 123 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHK 185 +S + + + F + D + + K NN+ + + ++ Sbjct: 124 KSAYYGFLRQ-KKDKIDINIRAGEFGQKLGDWLVYVDK-TENNSYDNLVLFSNKSLSQES 181 Query: 186 IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL--QTESANSSTIVLKAN 243 AQ G+I+ LN H + + F+ L + +S NS+ Sbjct: 182 FILAQKGNINNQNGVFELNLYNGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYLQG 241 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 L + N N + +R +Q + +F L S+ + R Sbjct: 242 TDYLGYWKKAFGKNANKNQK----------RRFSQAILVSLFPLASVFLIPLFGIANPRF 291 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL--MIKKKY 358 K + + + + GV+ ++H I + + + + F++ S L I K+Y Sbjct: 292 KTNWSYFYVLGAVGVY---FLMVHVISTDLFLMTFFFPFIWAFISYLLFRKFILKRY 345 >gi|229588598|ref|YP_002870717.1| putative ABC transporter membrane protein [Pseudomonas fluorescens SBW25] gi|229360464|emb|CAY47321.1| putative ABC transport system, membrane protein [Pseudomonas fluorescens SBW25] Length = 359 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 51/366 (13%), Positives = 127/366 (34%), Gaps = 18/366 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLV--SSSTESLNILLKISGYLIP 58 M + YI + + L I+ +A + I+ V S T ++ +L P Sbjct: 1 MAKLDRYIGSSVLIAILAVLGIILGLA---SLFAFIDEVGNVSDTYTVWDVLSYVALTAP 57 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 L + P + L S+ ++EL I+ G S ++ V+ +LL + Sbjct: 58 RRLYDMMPMAALIGCLIGLGSLASSSELTIMRAAGVSIGRIVWAVMKPMLLLMACSVLIG 117 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD- 177 + P +T + A AQ + + L+ R ++ +I I+ P L G+ Sbjct: 118 EYVAPPAETTAQANRALAQGSGDAQSSKHGLWHRQGEE-FIHINAVQPGGLLIGVTRYTF 176 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAI--ILNDGEVHRKSPISKDISIMKF--KSYTLQTESA 233 ++ + +A+ ++ + + + + ++ + + + + Sbjct: 177 DKERHLLESSFAKRAQYSGEKWQLSDVTTTYFRNIGQGTNARTEVINVPSEEWDIALKPE 236 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWL--FPVIFGLISIV 291 +T+V+ +S L + + + Y F ++ Q + ++ IS + Sbjct: 237 LLNTVVMIPESLPISGLWS-YIHYLKDQGLNNGRYWLAFWVKVLQPVVTAALVLMAISFI 295 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 R++ ++ +F + + F + + L I ++ Sbjct: 296 FGPLRSVTLGQR----VFTGVLVGFTFRIAQDLLGPSSLVFGFSPLFAVLVPTAICALAG 351 Query: 352 LMIKKK 357 + ++ Sbjct: 352 FWLLRR 357 >gi|300312407|ref|YP_003776499.1| permease [Herbaspirillum seropedicae SmR1] gi|300075192|gb|ADJ64591.1| permease transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 376 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 55/377 (14%), Positives = 135/377 (35%), Gaps = 23/377 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + Y I RS L + + + +++ ++ V + L + +P Sbjct: 1 MRVIQRYFTSEITRSVLFALAAFLALFAFFEMMGQLEQVGRNGYKLQQAVFYVLMGLPGN 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + T L+ + +E I+ + S + + + + ++ + + Sbjct: 61 VYELMPTAVLIGTIYTLSQLAARSEFTIMRVSSMSTGQAARVLARIGVGFAVLTIVFGEL 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFF-----------RLDDDLYIKISKYNPNNT 169 I PK ++L +AQ A S ++ + +I I P+ Sbjct: 121 IAPKATEWAEKLKLQAQGASLSSQFRSGMWAKDVIRDHGLEGNVVGSRFINIRTVQPDGR 180 Query: 170 LQGIFIVD-SRDTQTHKIYYAQSGSIDLDRQ----AIILNDGEVHRKSPISKDISIMKFK 224 ++G+ + + D ++ A++G D + Q ++ +D I++ + +K Sbjct: 181 IEGVKLYELDSDFHMARMVTAKAGMYDGNHQWTLSDVVQSDFTGGSDRKITEPVKTVKSA 240 Query: 225 SYTLQTE-SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPV 283 TL +E + +++ D+ ++ L + + + Y F K++ L Sbjct: 241 QLTLVSEVTPEILSVLFADPDRMSAYDLLAYTKHLEANNQRTDRYEIAFWKKIVYPLS-- 298 Query: 284 IFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY--- 340 IF ++++ R IF + I S H N + + Sbjct: 299 IFVMLALALPFAYLHFRAGGVSLKIFTGIMIGVCFQLINSLFSHLGLLNTWPAFVTAALP 358 Query: 341 -LFLFCISSIFLLMIKK 356 L +++ L +++ Sbjct: 359 SLLFMALAAGALWWVER 375 >gi|294492514|gb|ADE91270.1| putative permease [Escherichia coli IHE3034] gi|307629338|gb|ADN73642.1| hypothetical protein UM146_21570 [Escherichia coli UM146] gi|315288387|gb|EFU47785.1| putative inner membrane protein [Escherichia coli MS 110-3] gi|323950669|gb|EGB46547.1| inner membrane protein yjgQ [Escherichia coli H252] gi|323955548|gb|EGB51312.1| inner membrane protein yjgQ [Escherichia coli H263] Length = 360 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 54/361 (14%), Positives = 127/361 (35%), Gaps = 11/361 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + + I++ ++ + + + L + +P Sbjct: 5 GVLDRYIGKTI---FTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVP 61 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L + + +EL+++ +G +R+ + V+ AI L + Sbjct: 62 KDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIG 121 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-D 177 + P+ + A+A + ++ L+ + ++ ++ I + + L GI I Sbjct: 122 EWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNN-FVYIERVKGDEELGGISIYAF 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + + YA + D + + L+ E +P S ++ Sbjct: 181 NENRRLQSVRYAAAAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + ++S L N + Y+ ++ Q L + L+++ Sbjct: 241 VVALDPDALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 IS F V F + P +L F + S++LLM K Sbjct: 300 LRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRK 359 Query: 356 K 356 Sbjct: 360 S 360 >gi|325996358|gb|ADZ51763.1| integral membrane protein [Helicobacter pylori 2018] gi|325997946|gb|ADZ50154.1| hypothetical protein hp2017_1044 [Helicobacter pylori 2017] Length = 345 Score = 98.5 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 63/357 (17%), Positives = 135/357 (37%), Gaps = 19/357 (5%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ + + F L + FI+ ++ ++ ++ S L+++ Y +P + + Sbjct: 4 HYLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFIL 63 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P F L+ ++ + ELL+ + G S T+ K + L++L+S L + I+ P Sbjct: 64 PITFFAACALGLSRLSYDHELLVFFSLGVSPKTMTKAFVPLSLLVSAILLVFSLILIPTS 123 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHK 185 +S + + + F + D + + K NN+ + + ++ Sbjct: 124 KSAYYGFLRQ-KKDKIDINIRAGEFGQKLGDWLVYVDK-AENNSYDNLVLFSNKSLSQES 181 Query: 186 IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL--QTESANSSTIVLKAN 243 AQ G+I+ LN H + + F+ L + +S NS+ Sbjct: 182 FILAQKGNINNQNGVFELNLYNGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYLQG 241 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 L + N N + +R +Q + +F L S+ + R Sbjct: 242 TDYLGYWKKAFGKNANKNQK----------RRFSQAILVSLFPLASVFLIPLFGIANPRF 291 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL--MIKKKY 358 K + + + + GV+ ++H I + + + + F++ S L I K+Y Sbjct: 292 KTNWSYFYVLGAVGVY---FLMVHVISTDLFLMTFFFPFIWAFISYLLFRKFILKRY 345 >gi|241765202|ref|ZP_04763186.1| permease YjgP/YjgQ family protein [Acidovorax delafieldii 2AN] gi|241365131|gb|EER60003.1| permease YjgP/YjgQ family protein [Acidovorax delafieldii 2AN] Length = 368 Score = 98.5 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 49/380 (12%), Positives = 128/380 (33%), Gaps = 37/380 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTES---LNILLKISGYLI 57 MK +I R + L + + + ++ + V S+ ++ L+ L I Sbjct: 1 MKVLRRFIHREAFFAVGFVTLGFLALFFFFDLIDELRWVGSTGQNGYQLSHALLFVSLSI 60 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 P+ L + P + T V+ + +++E I+ +G ++ +L L + F Sbjct: 61 PSHLYELLPITVLIGTIFVMARLAQSSEFTIMRTSGMGPWRALRTLLTLGGFFVLLTFAI 120 Query: 118 ENIIEPKCRSTIK----QLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI 173 + + P + + + T ++L+E + D + + + + + + Sbjct: 121 GDYVAPLTERAAQLIKVRHLGRLTSGATGAWLKE---RQQDHSFAVNVRALSSDGGMVDV 177 Query: 174 FIVDSRDTQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 I + + +A +G L + + S + + ++ + Sbjct: 178 RIFEFDEKGRLASQIHAATGQFGSAGT-WDLQQVQRNSFVQKSSEEARVE------SISA 230 Query: 233 ANSSTIVLKANDQNLSFLLNPNP----------NNPNYRPELLETYRSEFHKRLTQWLFP 282 + D + LL P+ + + + Y EF +++ L Sbjct: 231 PVWQWPTRISADMVAASLLKPDRMATVDLFQYIRHLEANGQSAQRYEIEFWRKVFYPLSC 290 Query: 283 VIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYI--- 336 ++ ++++ A R +F + F F Y + +P+ Sbjct: 291 LVMVVLALPFA--YLHFRAGGIAGYVFGGVMAGISFFLLNNVFGYAGNLQNWSPWLTAAA 348 Query: 337 -PILYLFLFCISSIFLLMIK 355 ++Y L + +L++ + Sbjct: 349 PGLIYSVLSLAAFGWLVLRR 368 >gi|29654138|ref|NP_819830.1| putative permease [Coxiella burnetii RSA 493] gi|161831591|ref|YP_001596891.1| putative permease [Coxiella burnetii RSA 331] gi|29541404|gb|AAO90344.1| hypothetical membrane spanning protein [Coxiella burnetii RSA 493] gi|161763458|gb|ABX79100.1| putative permease [Coxiella burnetii RSA 331] Length = 355 Score = 98.5 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 58/365 (15%), Positives = 129/365 (35%), Gaps = 18/365 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI I + + L ++ I ++ + +++ + S L +P+ Sbjct: 1 MPLLNRYIRNAIITATALVMLVLLGIEMFMEFIGQLSQIGSVHYGLGQAFLYVLTQLPSD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L + ++EL+++ G S + V+ A+L+ + + + Sbjct: 61 LYQLFPMAGFLGCLIGLGRLASSSELMVMRTAGVSIAGVTWAVVKAALLMMVVMTFIGEV 120 Query: 121 IEPKCRSTIKQL-SAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI---FIV 176 I P+ ++ ++ + A+ + L + ++ +I I + N + + FI Sbjct: 121 IAPQLEASGEETKLTELSKAVGYKALGD-VWLHGAQ-SFIHIGSVDAKNKISEVSQFFI- 177 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI-SKDISIMKFKSYTLQTESANS 235 + Q YA G IL + + + +P + + I KF T+ + Sbjct: 178 -NNKHQLLSAVYAPKGEYVKGH--WILYNVKQTQFTPNRTTEKKIAKFP-LTIVFNPDHL 233 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + Q++ L + Y F +R Q L V+ + + Sbjct: 234 QQGRKMVDRQSIVGLYH-TIRYHQQAGLQTSRYVFAFWQRFIQPLTTVVMICLGVPFIFG 292 Query: 296 RALVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 +RQ I + I F + F + P + ++ LF + + LL Sbjct: 293 --SLRQASMGLRILTGIVIGFAFYMLNQFFGPFAMVYQIPPIFAALMPTVLFAVGCVILL 350 Query: 353 MIKKK 357 ++ Sbjct: 351 RYSRR 355 >gi|332086995|gb|EGI92129.1| hypothetical protein SB359474_4824 [Shigella boydii 3594-74] Length = 360 Score = 98.5 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 54/361 (14%), Positives = 125/361 (34%), Gaps = 11/361 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + + I++ ++ + + + L + +P Sbjct: 5 GVLDRYIGKTI---FTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVP 61 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + P + L + + +EL+++ +G +R+ + V+ AI L + Sbjct: 62 KDVQTFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIG 121 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-D 177 + P + A+A + ++ L+ + ++ ++ I + + L GI I Sbjct: 122 EWVAPLGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNN-FVYIERVKGDEELGGISIYAF 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + + YA + D + + L+ E +P S ++ Sbjct: 181 NENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + ++S L N + Y+ ++ Q L + L+++ Sbjct: 241 VVALDPDALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 IS F V F + P +L F + S++LLM K Sbjct: 300 LRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRK 359 Query: 356 K 356 Sbjct: 360 S 360 >gi|189501496|ref|YP_001957213.1| permease YjgP/YjgQ family protein [Candidatus Amoebophilus asiaticus 5a2] gi|189496937|gb|ACE05484.1| permease YjgP/YjgQ family protein [Candidatus Amoebophilus asiaticus 5a2] Length = 357 Score = 98.5 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 64/362 (17%), Positives = 131/362 (36%), Gaps = 10/362 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL+ SFL I+ I +I I ++ S + +P + Sbjct: 1 MKLLDRYILKKFLFSFLFILCLIILIITLIDITEKNEYFIRHKLSFREIADYYYNFLPFM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 MV+P + T V + + + TE++ I + G S + + P L A L+IF F+ Sbjct: 61 TNMVSPITIFITTIFVTSRLAQRTEIIAILSGGVSFVRFLVPYLIGATFLAIFNFMLIGW 120 Query: 121 IEPKCRSTIKQLSAKAQL-ALTFSYLEENLFFRLDDDLYIKIS-KYNPNNTLQGIFIVDS 178 I K+++ + + + N+ +L D Y+ + + N + + Sbjct: 121 ILADANK--KRVAFEIEYVDSPYRSSSRNIHIKLSTDTYLYVGYYRSYNGLGTDVTLETI 178 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 RD + + A++ + L D + + + I+ K TL + Sbjct: 179 RDNRLMEKISAKAIRWVEESGQWQLKDWICRKIDGLDEHITSGKAMDLTLNL---HPEDF 235 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLET---YRSEFHKRLTQWLFPVIFGLISIVAADK 295 + + L + + R + + + +E + R +I L+ +V + + Sbjct: 236 SINPKLHEMLTLTELDKHIQKLREKGTDNLNFFLTEKYVRYMSPFAAIILTLMGVVVSAR 295 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 ++ +I FI I F + N + +F I ++ L + Sbjct: 296 KSRGGVGLQIALGFILALIYIAFFLFARGAANVKGNNLLLTIWMPNIVFSIITLILYKLT 355 Query: 356 KK 357 K Sbjct: 356 PK 357 >gi|16763280|ref|NP_458897.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29144759|ref|NP_808101.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213162831|ref|ZP_03348541.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213427634|ref|ZP_03360384.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213618568|ref|ZP_03372394.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213650367|ref|ZP_03380420.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|289824527|ref|ZP_06544086.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25513067|pir||AG1061 probable inner membrane protein STY4818 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16505588|emb|CAD06940.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29140398|gb|AAO71961.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 360 Score = 98.5 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 53/363 (14%), Positives = 124/363 (34%), Gaps = 14/363 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + + I++ ++ + + + L + +P Sbjct: 5 GVLDRYIGKTI---FTTIMMTLFMLVSLSGIIKFVDQLKKAGQGNYDALGAGMYTLLSVP 61 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L + + +EL+++ +G +R+ + V+ AI L + Sbjct: 62 KDIQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIG 121 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-- 176 + P+ + A+A + ++ L+ + ++ ++ I + + L GI I Sbjct: 122 EWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNN-FVYIERVKGDEELAGISIYAF 180 Query: 177 -DSRDTQTHKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESAN 234 D R + + YA S D + + L+ E ++P S ++ Sbjct: 181 NDQR--RLQSVRYAASAKFDPEHKVWRLSQVDESDLQNPKQITGSQTVSGTWKTNLTPDK 238 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + L + ++S L N + Y+ ++ Q L + L+++ Sbjct: 239 LGVVALDPDALSISGLHN-YVKYLKSSGQDAGRYQFNMWSKIFQPLSVAVMMLMALSFIF 297 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 IS F V + + P + L LM+ Sbjct: 298 GPLRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIVGALLPSASFFLISLWLML 357 Query: 355 KKK 357 +K Sbjct: 358 RKS 360 >gi|254507394|ref|ZP_05119529.1| permease YjgP/YjgQ [Vibrio parahaemolyticus 16] gi|219549650|gb|EED26640.1| permease YjgP/YjgQ [Vibrio parahaemolyticus 16] Length = 356 Score = 98.5 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 59/360 (16%), Positives = 143/360 (39%), Gaps = 13/360 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +LYI R I + M ++ ++ +I+ ++++ V + L IP + Sbjct: 3 KILDLYIGRTIIATTSMVLATLIGLSSIIRFVEQLRSVGKGSYDLLNAFYFVLLGIPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + + L + ++EL+++ +G S++ + VL AI L + + + Sbjct: 63 ELFFAMSALLGALIGLGILASSSELVVMQASGYSKLDIGLSVLKTAIPLMLIIMLLGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI-VDSRD 180 P+ + ++L + + + ++ R DD +I I K + TL G+ + + Sbjct: 123 APQAQKMARELRSFSISGGQIVSVRAGVWARDVDD-FIFIGKVEDD-TLYGVKVWRFDDE 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + +++ +A D Q ++ + E+ + +++ K K Y +T V+ Sbjct: 181 KKLYQVMFAPEADYLGDNQ-WLMKNAEITDMA-DKVELAKSKVKEYAWKTTLVPDKLAVV 238 Query: 241 K--ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADKR 296 K + +S L + + Y +++TQ + + L++ V R Sbjct: 239 KVEPEELAMSGLYD-YVTYLKASEQDASRYELALWRKVTQPISIAVMMLLALSFVFGPLR 297 Query: 297 ALVRQRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 ++ + + + + F+G +++ I P ++ +F ++ LL K Sbjct: 298 SVSMGARVLSGVVAGFTFYISSEFFGPLTLVYGIP--PAVGAVMPSLVFLTLALMLLRRK 355 >gi|161829745|ref|YP_001596892.1| putative permease [Coxiella burnetii RSA 331] gi|161761612|gb|ABX77254.1| putative permease [Coxiella burnetii RSA 331] Length = 370 Score = 98.5 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 52/331 (15%), Positives = 120/331 (36%), Gaps = 21/331 (6%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ + I + L + L ++ I Q + +N ++ ++ +++I P +L + Sbjct: 5 RYLCKEILGTLLATTLILLIIFMTNQFVHYLNDAAAGKITVKAVMEIMSLQAPLLLGYLL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + L M + E++I+ G SR ++ ++ LA + + + +EPK Sbjct: 65 PLGLFLGGLLALGRMAVDHEMVILTACGVSRAQIVGMLIVLATFIGVIVAWLMLSVEPKM 124 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRL-DDDLYIKISKYNPNNT-LQGIFIVDSRDT-- 181 + ++ A + + F L + N ++ + +F+ S Sbjct: 125 QWYRVKILKDAVATASLEKIVPGRFQLLSSNGQVFYAGGVNDHHQKMLNVFLAQSETAGG 184 Query: 182 -QTHKIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 Q + A S I+ +G + P +MKF Y ++ S Sbjct: 185 KQRWDLVSADQAGEYSTAKGENFILFKNGFRYVGIPGELKYDVMKFGEYGIRLTSPAM-D 243 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 I + + S L + + + +E R+ L +F L+ + ++ Sbjct: 244 ITERVDAMPTSKLWHLHSKDL--------KAAAELQWRIAMPLSVWLFALLIVPLSEANP 295 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHK 328 ++ K + ++ I G + F ++ Sbjct: 296 ---RKGKFAQMLPAVLIYIG-YANFMFLGRT 322 >gi|325279695|ref|YP_004252237.1| permease YjgP/YjgQ family protein [Odoribacter splanchnicus DSM 20712] gi|324311504|gb|ADY32057.1| permease YjgP/YjgQ family protein [Odoribacter splanchnicus DSM 20712] Length = 359 Score = 98.5 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 63/368 (17%), Positives = 135/368 (36%), Gaps = 20/368 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 MK +LYI+R +F S + I+ I V + +++ + + I+ IP Sbjct: 1 MKKLDLYIIRKFLGTFFFSLVLILCIVVVFDLSEKLEKFLENEAPVKAIVFDYYKNFIPY 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + + + + M ++E++ I +TG S + P L A +++I F+ Sbjct: 61 FANVFSSLFTFISVIFFTSKMAYDSEIIAILSTGISFRRFLFPYLMSATVIAILSFLLGA 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDS 178 I P + + + E+N+ ++ YI +S Y+ +N I + Sbjct: 121 FIIPNANEKRIEFEKQYMGKRYANK-EQNIHRQIAPGTYIYMSSYSVASNVGYDFSIENF 179 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 R + + D + + ++++ ++ + + + + + + S Sbjct: 180 RGDTLVNKLTSSRITWDKENKKWVIHNWKLREIEGDKETYTTGQKLDTVMAFQPSEFSEN 239 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLET-----YRSEFHKRLTQWLFPVIFGLISIVAA 293 K +Q L P + R ++ + ++ E +K + I I + Sbjct: 240 PKKIREQ----LTFPELDRYIDRMKMRGSSNVIEFQIEKYKMIANAFATFILTFIGVS-- 293 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF----LFCISSI 349 +R +H + I L ISF + F N P+L ++ LF I + Sbjct: 294 ISSRKIRGGMGLH-LGIGLLISFS-YILFMQFSTVFATNGNMNPLLAVWLPNILFAIIGV 351 Query: 350 FLLMIKKK 357 F+ K Sbjct: 352 FVYRTAPK 359 >gi|322834555|ref|YP_004214582.1| permease YjgP/YjgQ family protein [Rahnella sp. Y9602] gi|321169756|gb|ADW75455.1| permease YjgP/YjgQ family protein [Rahnella sp. Y9602] Length = 356 Score = 98.5 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 55/361 (15%), Positives = 128/361 (35%), Gaps = 13/361 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI R I + +M+ +V ++ +I+ + ++ V S + +P + Sbjct: 3 GVLDRYIGRTIFNTIMMTLFMLVSLSGIIKFVDQLRKVGQGGYSAAGAGLYTLLSVPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ +EL+++ +G +R+ + V+ AI L + + Sbjct: 63 EIFFPMAALLGALLGLGTLATRSELVVMQASGFTRMQIAASVMKTAIPLVLLTMAIGEWV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI-VDSRD 180 P+ + A+ + + ++ + D +I I + L G+ I + + Sbjct: 123 APQGEQMARNYRAQQMYGGSLLSTQNGVWAKDGHD-FIYIERVAGEKELTGVNIYHFNEE 181 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT----LQTESANSS 236 + + YA S + D + D +S ++ + I ++ T Sbjct: 182 NKLQSVRYASSATFDNGEWKLSQVD-----ESDLTDQLQITGSQTLTGVWKTNLTPDKLG 236 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + ++S L N + + Y+ ++ L + L+++ Sbjct: 237 VVALDPDALSISGLHN-YVKYLKQSGQEAKRYQLNMWSKIFSPLSVAVMMLMALSFIFGP 295 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-PYYIPILYLFLFCISSIFLLMIK 355 I F V + + P +L LF + S+FLL+ K Sbjct: 296 LRSVPMGVRVVTGICFGFLFYVLDQIFGPLSLVYSIPPILGALLPSGLFFVISMFLLLKK 355 Query: 356 K 356 + Sbjct: 356 R 356 >gi|327481778|gb|AEA85088.1| permease [Pseudomonas stutzeri DSM 4166] Length = 353 Score = 98.5 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 53/359 (14%), Positives = 124/359 (34%), Gaps = 10/359 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + L IV +A + + + V L L+ P Sbjct: 1 MVKLDRYIGIHVFLAILTVLGIIVGLALLFAFIDELGDV-QGNYGLGDALQYVLLTSPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L ++ ++EL I+ G S ++ V+ ++L + + Sbjct: 60 LYDMLPMAALIGCLIGLGTLASSSELTIMRAAGVSLGRIVLSVMKPMLVLLVAGILIGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF-IVDSR 179 + P + + AQ A + L+ ++ ++ ++ P L G+ Sbjct: 120 VAPLTEDIAQARRSLAQGAGEAQSSKRGLW-HRQENEFVHVNAVQPGGVLVGVTRYRFDE 178 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + +A+ S D L + +++ + + +Q T+V Sbjct: 179 ERRLLSSSFARRASYQGDH--WRLENIATTHFRGDHTEVARAPEERWDVQLTPQLLGTVV 236 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 ++ +++ L + + Y F ++ Q V L++I + Sbjct: 237 MEPEALSITGL-WRYIHYLGEQGLNNSRYWLAFWTKVLQPAVTVALVLLAISFIFGP--L 293 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF-LFCISSIFLLMIKKK 357 R IF + + F VF ++ Q + P+L + C+ ++ + ++ Sbjct: 294 RSVTLGQRIFTGVVVGF-VFRIIQDLLGPASQVFGFSPLLAVVLPACVCALIGAWLLRR 351 >gi|254481253|ref|ZP_05094498.1| putative permease, YjgP/YjgQ family [marine gamma proteobacterium HTCC2148] gi|214038416|gb|EEB79078.1| putative permease, YjgP/YjgQ family [marine gamma proteobacterium HTCC2148] Length = 353 Score = 98.5 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 44/359 (12%), Positives = 114/359 (31%), Gaps = 9/359 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + ++ + + L+ IV + + + + + S T + + +P Sbjct: 1 MRKLDRHVGWTVFVAILLVLAIIVGLDAIAAFIDEADDI-SKTYTFGQVGLYILLTLPGR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L PF + L + ++EL+++ G S L+ + A+L++I F Sbjct: 60 LYEFIPFAALIGCMLGLGQLATSSELVVMRAAGVSTGRLVWVAMKPALLIAIMGFSLGEF 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI-FIVDSR 179 + P+ + A AQ ++ R + + ++ + + GI + Sbjct: 120 VAPETEQMAETQRALAQNPGESFGGRYGIWNR-EGNTFLHFNAVEAGGVVHGITMLEFDE 178 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 D A+ S + + D + S + + + + Sbjct: 179 DLLMEYSLRARRASFEGG--YWTMEDAVLTNFSSWQTTRETHEVMRWDTGITPELLTVMA 236 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLF--PVIFGLISIVAADKRA 297 ++ +S L + + Y+ ++ Q ++ IS + R Sbjct: 237 VEPEYLPISDLYR-FSRYLQSQGLDSDDYQLALWGKILQPAAIGALVLVAISFIFGPLRE 295 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + + + + P Y ++ + L + + LL+ + Sbjct: 296 GTMGFRIFAGVIVGIVFRTSQDLLGPASL-VFGFAPIYAALVPILLCGAAGMLLLLRAR 353 >gi|317046772|ref|YP_004114420.1| permease YjgP/YjgQ family protein [Pantoea sp. At-9b] gi|316948389|gb|ADU67864.1| permease YjgP/YjgQ family protein [Pantoea sp. At-9b] Length = 358 Score = 98.5 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 48/362 (13%), Positives = 125/362 (34%), Gaps = 12/362 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI + I + +M+ +V ++ +I+ + ++ + + +P + Sbjct: 3 KVLDRYIGKTIFNTIMMTLFMLVSLSGIIKFVDQLRKTGQGAYTALDAGYYTLLSVPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ + +EL+++ +G +R+ + V+ AI L + + Sbjct: 63 EIFFPMAALLGALLGLGNLAQRSELVVMQASGFTRMQVALAVMKTAIPLVLLTMAIGEFV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + A+ + L+ + D + +I I + +N + G+ I + + Sbjct: 123 APQGEQMARNYRAQQLYGGALVSTQNGLWAK-DGNSFIYIERIKGDNQIDGVSIYNFSEQ 181 Query: 182 QTHKIY-YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK-----SYTLQTESANS 235 + YA + + D ++ +L+ KD + + Sbjct: 182 RRLLSVRYAATATWDNAKKLWVLS----QVDESDLKDAKQITGSQSLSGEWKTNLTPDKL 237 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + L + ++ L N + + Y+ ++ Q L + L+++ Sbjct: 238 GVVALDPDALSIRGLYNYSK-YLKQSGQEAGRYQLNMWSKIFQPLSVAVMMLMALSFIFG 296 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 IS F V + + P + + + LM+K Sbjct: 297 PLRSVSMGVRVVTGISFGFLFYVLDQIFGPLSLVYGIPPILGAVLPSAAFFAISLFLMLK 356 Query: 356 KK 357 ++ Sbjct: 357 RR 358 >gi|91213818|ref|YP_543804.1| hypothetical protein UTI89_C4869 [Escherichia coli UTI89] gi|117626606|ref|YP_859929.1| hypothetical protein APECO1_2132 [Escherichia coli APEC O1] gi|237703938|ref|ZP_04534419.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|91075392|gb|ABE10273.1| hypothetical protein UTI89_C4869 [Escherichia coli UTI89] gi|115515730|gb|ABJ03805.1| conserved hypothetical protein [Escherichia coli APEC O1] gi|226901850|gb|EEH88109.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] Length = 361 Score = 98.5 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 54/361 (14%), Positives = 127/361 (35%), Gaps = 11/361 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + + I++ ++ + + + L + +P Sbjct: 6 GVLDRYIGKTI---FTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVP 62 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L + + +EL+++ +G +R+ + V+ AI L + Sbjct: 63 KDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIG 122 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-D 177 + P+ + A+A + ++ L+ + ++ ++ I + + L GI I Sbjct: 123 EWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNN-FVYIERVKGDEELGGISIYAF 181 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + + YA + D + + L+ E +P S ++ Sbjct: 182 NENRRLQSVRYAAAAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLG 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + ++S L N + Y+ ++ Q L + L+++ Sbjct: 242 VVALDPDALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGP 300 Query: 297 ALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 IS F V F + P +L F + S++LLM K Sbjct: 301 LRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRK 360 Query: 356 K 356 Sbjct: 361 S 361 >gi|204927347|ref|ZP_03218549.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204324012|gb|EDZ09207.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 360 Score = 98.5 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 55/363 (15%), Positives = 128/363 (35%), Gaps = 15/363 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + + I++ ++ + + + L + +P Sbjct: 5 GVLDRYIGKTI---FTTIMMTLFMLVSLSGIIKFVDQLKKAGQGNYDALGAGMYTLLSVP 61 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L + + +EL+++ +G +R+ + V+ AI L + Sbjct: 62 KDIQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIG 121 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-- 176 + P+ + A+A + ++ L+ + ++ ++ I + + L GI I Sbjct: 122 EWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNN-FVYIERVKGDEELAGISIYAF 180 Query: 177 -DSRDTQTHKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESAN 234 D R + + YA S D + + L+ E ++P S ++ Sbjct: 181 NDQR--RLQSVRYAASAKFDPEHKVWRLSQVDESDLQNPKQITGSQTVSGTWKTNLTPDK 238 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + L + ++S L N + Y+ ++ Q L + L+++ Sbjct: 239 LGVVALDPDALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIF 297 Query: 295 KRALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 IS F V F + P +L F + S++L++ Sbjct: 298 GPLRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPVVGALLPSASFFLISLWLML 357 Query: 354 IKK 356 K Sbjct: 358 RKS 360 >gi|82546485|ref|YP_410432.1| hypothetical protein SBO_4178 [Shigella boydii Sb227] gi|81247896|gb|ABB68604.1| conserved hypothetical protein [Shigella boydii Sb227] Length = 361 Score = 98.5 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 54/361 (14%), Positives = 125/361 (34%), Gaps = 11/361 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + + I++ ++ + + + L + +P Sbjct: 6 GVLDRYIGKTI---FTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVP 62 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + P + L + + +EL+++ +G +R+ + V+ AI L + Sbjct: 63 KDVQTFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIG 122 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-D 177 + P + A+A + ++ L+ + ++ ++ I + + L GI I Sbjct: 123 EWVAPLGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNN-FVYIERVKGDEELGGISIYAF 181 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + + YA + D + + L+ E +P S ++ Sbjct: 182 NENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLG 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + ++S L N + Y+ ++ Q L + L+++ Sbjct: 242 VVALDPDALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGP 300 Query: 297 ALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 IS F V F + P +L F + S++LLM K Sbjct: 301 LRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRK 360 Query: 356 K 356 Sbjct: 361 S 361 >gi|158425948|ref|YP_001527240.1| permease precursor [Azorhizobium caulinodans ORS 571] gi|158332837|dbj|BAF90322.1| permease precursor [Azorhizobium caulinodans ORS 571] Length = 363 Score = 98.5 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 57/369 (15%), Positives = 119/369 (32%), Gaps = 39/369 (10%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTV 60 ++ Y R S M V + ++ L+ + T S + ++ Y P Sbjct: 4 RTLGFYFARRFFASVTMIFFSCVGLIMLVDFLEMARRTADRDTVSAVTVALLTIYRTPAF 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + PF +++R EL++ G S P L +A L+ +F N Sbjct: 64 TEQLLPFAVLFGGMATFVTLSRKLELVVARAVGLSVWQFTSPALLVAFLIGVFATCVFNP 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN------------PNN 168 + + ++ A+ + +F + +I+ + Sbjct: 124 VSADFKERANRMEAEIFNTAS------GVFTQGTSGFWIRQQSVDGQAIIQAAASQQGGR 177 Query: 169 TLQGIFIVD-SRDTQTHKIYYAQSGSIDLD----RQAIILNDGEVHRKSPISKDISIMKF 223 L G+ + + R+ + A+S + ++A +L G + F Sbjct: 178 QLTGVTVFEFDRNGKLTDRVEAKSAILGDGYWTMKEARVLVPGSDQQ-----------TF 226 Query: 224 KSYTLQTESANSSTIVLKANDQNLSFLLNPNP-NNPNYRPELLETYRSEFHKRLTQWLFP 282 ++Y L T+ + + +SF P+ +N YR + L + Sbjct: 227 ETYLLATKLDPKQIQESLVSPETVSFWQLPDAISNAEQSGFGAARYRLQLQSLLARPFLL 286 Query: 283 VIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 V LI+ V + R I + F ++ G + + PI + Sbjct: 287 VAMVLIAAVVGL--RVFRFGGVGQTILGGVLAGFLLYLGTK-LAEDLGDAGVVHPIAAAW 343 Query: 343 LFCISSIFL 351 ++ IF+ Sbjct: 344 FPALAGIFM 352 >gi|255691880|ref|ZP_05415555.1| putative membrane protein [Bacteroides finegoldii DSM 17565] gi|260622433|gb|EEX45304.1| putative membrane protein [Bacteroides finegoldii DSM 17565] Length = 365 Score = 98.5 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 54/364 (14%), Positives = 131/364 (35%), Gaps = 16/364 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 +K + YI++ +++ + I+ IA V ++++ + + I+ + IP Sbjct: 7 IKRLDWYIIKKFLGTYVFAIALIISIAVVFDFNEKMDKLMEHEAPWSKIIFEYYMNFIPY 66 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + +TG S +++P + A ++++ F+ + Sbjct: 67 FSNLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMMRPYMISAAIIALTTFMLSS 126 Query: 120 IIEPKC---RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + PK R + K + T ++ +D + I YN F + Sbjct: 127 YVIPKGSVTRLNFEDRYIKPKKQNTARNVQ----LEVDSGVIAYIDNYNNAMKTGNRFSL 182 Query: 177 DS-RDTQTHKIYYAQSGSIDLDRQA-IILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 D D + A+ + D ++D + + + I+ + E ++ Sbjct: 183 DKFVDKKLVSHLTARRVTYDTTTVHKWTIHDYMIRELDGLKEKITKGDRIDSIINMEPSD 242 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + + L + ++ + E+HKR+ I +I + Sbjct: 243 FLIMKNQQEMLTSPQLSDYIEKQKRRGFANIKEFEIEYHKRIAMSFASFILTIIGVS-LS 301 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--FCISSIFLL 352 R I + LS S + F I N P++ +++ + I Sbjct: 302 SRKTKGGMGLHLGIGLGLSFS---YILFQTITSTFAINGNVPPVIAVWIPNILYAGIAFF 358 Query: 353 MIKK 356 + +K Sbjct: 359 LYQK 362 >gi|309784105|ref|ZP_07678747.1| conserved hypothetical protein [Shigella dysenteriae 1617] gi|308928098|gb|EFP73563.1| conserved hypothetical protein [Shigella dysenteriae 1617] Length = 360 Score = 98.5 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 54/361 (14%), Positives = 126/361 (34%), Gaps = 11/361 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + + I++ ++ + + + L + +P Sbjct: 5 GVLDRYIGKTI---FTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVP 61 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L + + +EL+++ +G +R+ + V+ AI L + Sbjct: 62 KDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIG 121 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-D 177 P+ + A+A + ++ L+ + ++ ++ I + + L GI I Sbjct: 122 EWAAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNN-FVYIERVKGDEELGGISIYAF 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + + YA + D + + L+ E +P S ++ Sbjct: 181 NENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + ++S L N + Y+ ++ Q L + L+++ Sbjct: 241 VVALDPDALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 IS F V F + P +L F + S++LLM K Sbjct: 300 LRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRK 359 Query: 356 K 356 Sbjct: 360 S 360 >gi|297624270|ref|YP_003705704.1| permease YjgP/YjgQ family protein [Truepera radiovictrix DSM 17093] gi|297165450|gb|ADI15161.1| permease YjgP/YjgQ family protein [Truepera radiovictrix DSM 17093] Length = 353 Score = 98.5 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 57/347 (16%), Positives = 118/347 (34%), Gaps = 22/347 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+LR +L+ + + + + +L ++ ++ Y +P L Sbjct: 5 RLAGYLLRETAGLYLLGVAAFCLLLSIDTLTVWAGYLIQQNATLGVIARLMLYQLPLFLH 64 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + +++EL G ++L+ P+L +L+S+ ++ +E Sbjct: 65 LSLPVAAVFAVLLATGRLAKDSELKAAYALGVPPLSLLWPLLGFGVLISVAALLNNGYLE 124 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN------TLQGIFIV 176 P+ + +L A A + + ++ FR + LY ++ + L G+ + Sbjct: 125 PRGQIAEDELVASFFNARPSAETQRDVSFRQEGGLY-YAARIRADTFDRTRAELSGVLVY 183 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 +Y A G+ D + L + EV R+ + + TL + Sbjct: 184 ----GDDGTLYSAPYGTWDSEVNTWTLEEVEVLREGEAPRLEPTL-----TLPFTLQADA 234 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 L A + L + + H+RL VIF LI+ Sbjct: 235 GASLSAAENLTLSELYARIEAGRRAGQSVRGDLFNLHRRLADASSAVIFVLIA---GALG 291 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 +R R I L + F W + + P++ +L Sbjct: 292 LHLRGRSAGFGWTIVLLVCFFALW---TLSESFFEQGVLSPVVAAWL 335 >gi|150005671|ref|YP_001300415.1| hypothetical protein BVU_3161 [Bacteroides vulgatus ATCC 8482] gi|212693333|ref|ZP_03301461.1| hypothetical protein BACDOR_02845 [Bacteroides dorei DSM 17855] gi|254884104|ref|ZP_05256814.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|265753721|ref|ZP_06089076.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|294776587|ref|ZP_06742057.1| putative membrane protein [Bacteroides vulgatus PC510] gi|319640869|ref|ZP_07995580.1| hypothetical protein HMPREF9011_01177 [Bacteroides sp. 3_1_40A] gi|149934095|gb|ABR40793.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482] gi|212664098|gb|EEB24670.1| hypothetical protein BACDOR_02845 [Bacteroides dorei DSM 17855] gi|254836897|gb|EET17206.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|263235435|gb|EEZ20959.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|294449575|gb|EFG18105.1| putative membrane protein [Bacteroides vulgatus PC510] gi|317387506|gb|EFV68374.1| hypothetical protein HMPREF9011_01177 [Bacteroides sp. 3_1_40A] Length = 390 Score = 98.5 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 53/346 (15%), Positives = 130/346 (37%), Gaps = 10/346 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPTV 60 K ++YI++ ++ + I+ IA V + + I+ ++ L I+ IP Sbjct: 33 KRLDIYIIKKFLGTYFFAIALIISIAVVFDVNENIDRFINNKAPLKAIVFDYYMNFIPYF 92 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +P + + + N+E++ + +TG S +++P + A ++S+ F Sbjct: 93 SNLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMMRPYMISAAIISVVTFGLGAY 152 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + PK T + + Y+ N+ +D + I +Y N F +D D Sbjct: 153 VIPKGNVTRLDFEDRYKKKKKQEYVR-NVQLEVDSGVIAYIERYENYNKTGYRFSLDKFD 211 Query: 181 TQTHKIY-YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + A+S + D + R+ ++ I + + ++ Sbjct: 212 DKKLVAHLTARSVTYDTASVHKWTIKNYMIREMEGMRE-KITRGDRLDTIIKMEPQDFLI 270 Query: 240 LKANDQNLS--FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +K Q ++ L ++ + E+++R+ I I + + ++ Sbjct: 271 MKGQQQTMTSPELKEYIDKQKRRGFANIKEFEIEYYQRIAMSFAAFILTTIGVSLSSRKM 330 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 + + + L++SF + F + N PI+ +++ Sbjct: 331 ---KGGMGLHLGVGLALSFS-YILFQTVSATFAVNGNTPPIIAVWI 372 >gi|303237034|ref|ZP_07323604.1| permease, YjgP/YjgQ family [Prevotella disiens FB035-09AN] gi|302482421|gb|EFL45446.1| permease, YjgP/YjgQ family [Prevotella disiens FB035-09AN] Length = 408 Score = 98.1 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 49/363 (13%), Positives = 129/363 (35%), Gaps = 14/363 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPTV 60 + YI++ +++ S + I+ IA V + ++ + I+ IP Sbjct: 49 GLLDWYIIKKFIGTYIFSIVLIISIAIVFDFNENLSKFTQYHAPWRAIIFDNYANFIPYY 108 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +P + + + ++E++ + G S L++P + IL++ + + Sbjct: 109 SNLFSPLFVFIAVIFFTSKLAGDSEIISMLAAGISFNRLMRPYMISCILIAGVTYYLNSS 168 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + +A + + EN+ ++ + I Y+ F +D + Sbjct: 169 VIPHGTVIRQNFNALYRNDKKNTT-GENIQLKVAKNTVAYIQHYDNTYKRGYGFSLDRFE 227 Query: 181 TQTHKIYYAQSG----SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + +I + + + ++ + + + I+ + E + Sbjct: 228 GKKLVDHLTATEIQYDTIADSKFHWKVTNWKIRKLKGLKEHITTGAEMDTVILMEPTDLI 287 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + S LL+ + + + Y EFHKR+ I +I + Sbjct: 288 YFDGQQEEFTSSQLLDYISKQTSRGSKNVIQYEVEFHKRIAMSFSSFILTIIGLSL---- 343 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHK---IEQNPYYIPILYLFLFCISSIFLLM 353 R+RK +++ + ++ V + I I N + ++ ++I Sbjct: 344 -SSRKRKGGMGMYLGIGLALSVSYILLQAISSTFAINTNASPMLAAWIPNIIFAAIAYFC 402 Query: 354 IKK 356 +K Sbjct: 403 YRK 405 >gi|16767725|ref|NP_463340.1| permease [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56416251|ref|YP_153326.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161617774|ref|YP_001591739.1| hypothetical protein SPAB_05637 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167551264|ref|ZP_02345019.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167991269|ref|ZP_02572368.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168232820|ref|ZP_02657878.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168234610|ref|ZP_02659668.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168244031|ref|ZP_02668963.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168262477|ref|ZP_02684450.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168464638|ref|ZP_02698541.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168821095|ref|ZP_02833095.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194446562|ref|YP_002043719.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194449673|ref|YP_002048503.1| hypothetical protein SeHA_C4884 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194470492|ref|ZP_03076476.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194738007|ref|YP_002117400.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197249048|ref|YP_002149399.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197262055|ref|ZP_03162129.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197365174|ref|YP_002144811.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198242808|ref|YP_002218343.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200388381|ref|ZP_03214993.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205355211|ref|YP_002229012.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207859605|ref|YP_002246256.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|238910635|ref|ZP_04654472.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|16423045|gb|AAL23299.1| putative permease [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56130508|gb|AAV80014.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161367138|gb|ABX70906.1| hypothetical protein SPAB_05637 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194405225|gb|ACF65447.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194407977|gb|ACF68196.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194456856|gb|EDX45695.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194713509|gb|ACF92730.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195632823|gb|EDX51277.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197096651|emb|CAR62266.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197212751|gb|ACH50148.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197240310|gb|EDY22930.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197292043|gb|EDY31393.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197937324|gb|ACH74657.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199605479|gb|EDZ04024.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205274992|emb|CAR40066.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205323911|gb|EDZ11750.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205330351|gb|EDZ17115.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205333019|gb|EDZ19783.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205337021|gb|EDZ23785.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205342262|gb|EDZ29026.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205348818|gb|EDZ35449.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206711408|emb|CAR35787.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|261249568|emb|CBG27435.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267996824|gb|ACY91709.1| putative permease [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301160964|emb|CBW20498.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312915576|dbj|BAJ39550.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|322615643|gb|EFY12563.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618703|gb|EFY15592.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322621884|gb|EFY18734.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627609|gb|EFY24400.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322630915|gb|EFY27679.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637866|gb|EFY34567.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642324|gb|EFY38930.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322643901|gb|EFY40449.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322651023|gb|EFY47408.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322656724|gb|EFY53012.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659852|gb|EFY56095.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322661937|gb|EFY58153.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322666315|gb|EFY62493.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322672734|gb|EFY68845.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676164|gb|EFY72235.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680648|gb|EFY76686.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684458|gb|EFY80462.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323132817|gb|ADX20247.1| putative permease [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323194205|gb|EFZ79402.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323197350|gb|EFZ82490.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201532|gb|EFZ86596.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206046|gb|EFZ91008.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213057|gb|EFZ97859.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215428|gb|EGA00172.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323219412|gb|EGA03897.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227716|gb|EGA11870.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323228886|gb|EGA13015.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323236502|gb|EGA20578.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239997|gb|EGA24044.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323241956|gb|EGA25985.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323247895|gb|EGA31832.1| lipopolysaccharide ABC transporter permease [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251467|gb|EGA35338.1| lipopolysaccharide ABC transporter permease [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258167|gb|EGA41844.1| lipopolysaccharide ABC transporter permease [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323263687|gb|EGA47208.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323265717|gb|EGA49213.1| lipopolysaccharide ABC transporter permease [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270161|gb|EGA53609.1| lipopolysaccharide ABC transporter permease [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326626151|gb|EGE32496.1| putative permease [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326630369|gb|EGE36712.1| putative permease [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|332991289|gb|AEF10272.1| putative permease [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 360 Score = 98.1 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 53/363 (14%), Positives = 124/363 (34%), Gaps = 14/363 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + + I++ ++ + + + L + +P Sbjct: 5 GVLDRYIGKTI---FTTIMMTLFMLVSLSGIIKFVDQLKKAGQGNYDALGAGMYTLLSVP 61 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L + + +EL+++ +G +R+ + V+ AI L + Sbjct: 62 KDIQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIG 121 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-- 176 + P+ + A+A + ++ L+ + ++ ++ I + + L GI I Sbjct: 122 EWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNN-FVYIERVKGDEELAGISIYAF 180 Query: 177 -DSRDTQTHKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESAN 234 D R + + YA S D + + L+ E ++P S ++ Sbjct: 181 NDQR--RLQSVRYAASAKFDPEHKVWRLSQVDESDLQNPKQITGSQTVSGTWKTNLTPDK 238 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + L + ++S L N + Y+ ++ Q L + L+++ Sbjct: 239 LGVVALDPDALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIF 297 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 IS F V + + P + L LM+ Sbjct: 298 GPLRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIVGALLPSASFFLISLWLML 357 Query: 355 KKK 357 +K Sbjct: 358 RKS 360 >gi|228471152|ref|ZP_04055971.1| permease, YjgP/YjgQ family [Porphyromonas uenonis 60-3] gi|228307092|gb|EEK16166.1| permease, YjgP/YjgQ family [Porphyromonas uenonis 60-3] Length = 361 Score = 98.1 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 52/354 (14%), Positives = 127/354 (35%), Gaps = 27/354 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 + + + YI ++ S + I+ +A + ++++ + L I+ +P Sbjct: 6 ISTVDRYIFIQFLATYFFSIVLILAVAIAFDVTEKLDRLLQPDVPLRAIIWDYYANFVPY 65 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + V + + N+E++ I + G S L+KP + A +++I F+ + Sbjct: 66 YANLFSPLFVFIAVIYVTSRLAENSEIIAILSCGMSFRRLLKPYMLGAAVIAILTFLLSS 125 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFF-------RLDDDLYIKISKYNPNNTLQG 172 + P ++ Y+++ ++ + ++ +S YN + + Sbjct: 126 FVIPPGNR--------VRIDFQNRYIKDKRITYANAIQMQVAPETFMFMSYYNDESKVGY 177 Query: 173 IFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT-- 230 F +D + + K + I L D + + F+ L T Sbjct: 178 TFSMDRFEGKDLKSRVMANSIIYDTLYNWQLQDYTITYFGERQDTL----FRGNQLDTII 233 Query: 231 -ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 + + + + L + R + Y E HKR+ I L+ Sbjct: 234 PITPRDFLVTEGDVEMLTTPELYHSIQQQRMRGAATQLYAIELHKRIAMIPASFILTLMG 293 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 + + ++ R+ + + LS+SF ++ F + P++ +L Sbjct: 294 VSLSARK---RKGGMGLALAVGLSLSF-IYILFMTVTASFAVTGAMAPVVAAWL 343 >gi|153209377|ref|ZP_01947372.1| putative permease [Coxiella burnetii 'MSU Goat Q177'] gi|165919052|ref|ZP_02219138.1| putative permease [Coxiella burnetii RSA 334] gi|212218294|ref|YP_002305081.1| hypothetical membrane spanning protein [Coxiella burnetii CbuK_Q154] gi|120575377|gb|EAX32001.1| putative permease [Coxiella burnetii 'MSU Goat Q177'] gi|165917247|gb|EDR35851.1| putative permease [Coxiella burnetii RSA 334] gi|212012556|gb|ACJ19936.1| hypothetical membrane spanning protein [Coxiella burnetii CbuK_Q154] Length = 355 Score = 98.1 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 57/364 (15%), Positives = 125/364 (34%), Gaps = 16/364 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI I + + L ++ I ++ + +++ + S L +P+ Sbjct: 1 MPLLNRYIRNAIITATALVMLVLLGIEMFMEFIGQLSQIGSVHYGLGQAFLYVLTQLPSD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L + ++EL+++ G S + V+ A+L+ + + + Sbjct: 61 LYQLFPMAGFLGCLIGLGRLASSSELMVMRTAGVSIAGVTWAVVKAALLMMVAMTFIGEV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI---FIVD 177 I P+ ++ ++ A +++ +I I + N + + FI Sbjct: 121 IAPQLGASGEETKLTALSKAVGYKALGDVWLHGAQ-SFIHIGSVDAKNKISEVSQFFI-- 177 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI-SKDISIMKFKSYTLQTESANSS 236 + Q YA G IL + + + +P + + I KF T+ + Sbjct: 178 NNKHQLLSAVYAPKGEYVKGH--WILYNVKQTQFTPNRTTEKKIAKFP-LTIVFNPDHLQ 234 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + Q++ L + Y F +R Q L V+ + + Sbjct: 235 QGRKMVDRQSIVGLYH-TIRYRQQAGLQTSRYVFAFWQRFIQPLTTVVMICLGVPFIFG- 292 Query: 297 ALVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 +RQ I + I F + F + P + ++ LF + + LL Sbjct: 293 -SLRQASMGLRILTGIVIGFAFYMLNQFFGPFAMVYQIPPIFAALMPTVLFAVGCVILLR 351 Query: 354 IKKK 357 ++ Sbjct: 352 YSRR 355 >gi|319788013|ref|YP_004147488.1| permease YjgP/YjgQ family protein [Pseudoxanthomonas suwonensis 11-1] gi|317466525|gb|ADV28257.1| permease YjgP/YjgQ family protein [Pseudoxanthomonas suwonensis 11-1] Length = 366 Score = 98.1 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 53/372 (14%), Positives = 121/372 (32%), Gaps = 25/372 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 ++ +LYI R + S L++ +V + V+ + ++ + + L + Y +P Sbjct: 5 IRLHDLYIGRVVLASVLLTWAVLVGLDVVLALSGQLGDLGKGSYDFPTALAVVAYSVPRR 64 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P+ + + L + +EL + G SR L V +LL+ + ++ Sbjct: 65 AYTIFPYAAVIGSLLGLGQLAGTSELTALRALGLSRRRLSISVAAALVLLTGLMVVTGET 124 Query: 121 IEPKCRSTIKQLSAKAQLALTF------SYLEEN-LFFRLDDDLYIKISKYNPNN----T 169 + P + QL A+ + E F D + Sbjct: 125 LAPWGQRQADQLKLAAKNNNVAMARYSGLWAREGDTFLNAIDG-----QERVEGGQRVLE 179 Query: 170 LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ 229 L+ + + + + + ++G + D L D + + + + + Sbjct: 180 LRDVRLYEVGEEGEVRSLT-RAGLVVHDANGWQLRDVRRVAFTGAGAVEETAEEQKWDSE 238 Query: 230 TESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 ++ + V + + + S L + YR R ++W +P+ + Sbjct: 239 LDANALAAGVTRPRNLSASDL----QASIEYRRRNGLDARDYEDTYWSRWFYPLNVLALC 294 Query: 290 IVAAD-KRALVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFC 345 + A +R +F+ + + G F + + L L Sbjct: 295 LAAVPFAFGSLRSGGMGKRLFLGIVFALGFMLLQMQFGRLAGAFRFDYRIAYALPPVLML 354 Query: 346 ISSIFLLMIKKK 357 +S FL K Sbjct: 355 ATSWFLFRRKSG 366 >gi|123440875|ref|YP_001004866.1| hypothetical protein YE0502 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122087836|emb|CAL10622.1| putative membrane protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 356 Score = 98.1 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 51/358 (14%), Positives = 122/358 (34%), Gaps = 6/358 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI R I + LM+ +V ++ +I+ + ++ V S + IP + Sbjct: 3 GVLDRYIGRTILNTILMTLFMLVSLSGIIKFVDQLRKVGQGDYSAASAGMYTLLSIPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ +EL+++ +G +R+ + V+ AI L + + Sbjct: 63 EIFFPMAALLGALLGLGTLATRSELVVMQASGFTRMQIAASVMKTAIPLVLLTMAIGEWV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV--DSR 179 P+ + A+ + + L+ + D +I I + + + L G+ I D + Sbjct: 123 APQGEQMARNFRAQQMYGGSLLSTQSGLWAKDGSD-FIYIQRVSGDKELTGVNIYHFDQQ 181 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 D + + YA + + + + + D E +P S + + Sbjct: 182 D-RLLSVRYAATATFEDNLWRLSQVD-ESDLSNPNKVTGSQTLTGEWKTNLTPEKLGVVA 239 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + + ++S L + + Y ++ + L+++ Sbjct: 240 MNPDSLSISGL-HDYSKYLRQSGQESSRYELNMWGKIFAPFSVAVMMLMALSFIFGPLRS 298 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I F V + + P I L + + L++K++ Sbjct: 299 VPMGVRVVTGIFFGFVFYVLDQIFGPLSLVYSIPPVIGALLPSILFLLISVYLLLKRR 356 >gi|299530037|ref|ZP_07043464.1| permease YjgP/YjgQ [Comamonas testosteroni S44] gi|298722017|gb|EFI62947.1| permease YjgP/YjgQ [Comamonas testosteroni S44] Length = 367 Score = 98.1 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 57/373 (15%), Positives = 127/373 (34%), Gaps = 22/373 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS--TESLNILLKISGYLIP 58 MK I R + ++ L L + + + ++ + V S + L IP Sbjct: 1 MKVLRNLIYREVIQAVLYVSLAFLALFFFFDLVDEMRWVGSGNAGYTATRALLFVTLSIP 60 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 L + P + V+ +++E I+ +G ++ +L L + + + Sbjct: 61 GHLYELMPIAVLIGAIFVMAKFAQSSEFTIMRTSGMGPWLALRTLLVLGMSFVVLTVLVG 120 Query: 119 NIIEPKCRSTIKQLSA----KAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF 174 + I P + ++L + T ++L+E + I + + Sbjct: 121 DYIAPAADNFSQKLRVVAKGQISRGATGAWLKEKQGNHS---VAINVGAVKAPGDFVNVR 177 Query: 175 IVD-SRDTQTHKIYYAQSGSIDLDRQAIIL--NDGEVHRKSPISKDISIMKFKS--YTLQ 229 I + + AQS +D D++ L G + +S + S + + Sbjct: 178 IFEFDSKGRIAAQINAQSAQVDEDKELWTLKGVQGSKVAQEGDVTKLSRISEASMNWPTK 237 Query: 230 TESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 +A S +LK D+ + L + + + Y EF +++ L ++ +++ Sbjct: 238 VTAAMVSGALLKP-DRMTTIALFQFVRHLQDNGQAAQKYEIEFWRKVFYPLSCLVMVVLA 296 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCI 346 + A R +F + F F YI P+ L+ Sbjct: 297 LPFA--YLHFRSGGITAYVFGGVMAGISFFLLNNVFGYIGTLQSWWPWLAAAAPGLLYTA 354 Query: 347 SSI--FLLMIKKK 357 S+ F ++ ++ Sbjct: 355 LSLSAFGWLVLRR 367 >gi|300774823|ref|ZP_07084686.1| YjgP/YjgQ family permease [Chryseobacterium gleum ATCC 35910] gi|300506638|gb|EFK37773.1| YjgP/YjgQ family permease [Chryseobacterium gleum ATCC 35910] Length = 370 Score = 98.1 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 55/382 (14%), Positives = 128/382 (33%), Gaps = 41/382 (10%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTE------SLNILLKISG 54 +K + YI++ +F + + + VI + Q+I + ++ + L+ Sbjct: 2 LKIVDRYIIKKYLGTFSFMLVLLSIVVLVIDVQQKIPRIENAKAIDPKLDLMYFLIHFYP 61 Query: 55 YLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFL 114 + I ++ + + M NTE++ I ++G S KP L +I + + Sbjct: 62 FWIINLVVTFLSILVFISVIYFTSRMANNTEIVAIISSGASFHRFSKPYLVTSIFIGLIA 121 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLF------FRLDDDLYIKISKYNPNN 168 + +++ P +L A + +E + +L YI I +N Sbjct: 122 LVVYHMVLPWANIKKNELEAYTYN----AANKEKILGTAPASSQLSKTEYIFIDSWNKRE 177 Query: 169 TLQGIFIVDSRDTQTHKIYY--AQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSY 226 F+ D Y A D ++ +LN+ + + + Sbjct: 178 KRGSSFVYQKYDKDRKMTYELKASEVYWDKAKKQFVLNNYLEKTINKDNSE--------- 228 Query: 227 TLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRP----------ELLETYRSEFHKRL 276 L + + LL N P L +Y +E H+R Sbjct: 229 KLNNGIELRKNYGHSPEELFPNELLGQNKTTPELLKFIEREKARGNSNLNSYLNELHQRT 288 Query: 277 TQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYI-IHKIEQNPYY 335 + + +I +++ + ++ + I +S++F + F + + ++ Sbjct: 289 SMPVSIIILTFLALS---LSSQKKRGGLGINLAIGISLAFIFVFSFEALKVVSENKSLSP 345 Query: 336 IPILYLFLFCISSIFLLMIKKK 357 ++L + L + K+ Sbjct: 346 ALAMWLPNLVFLPLTLYLYIKR 367 >gi|255013990|ref|ZP_05286116.1| hypothetical protein B2_08777 [Bacteroides sp. 2_1_7] Length = 361 Score = 98.1 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 59/360 (16%), Positives = 126/360 (35%), Gaps = 10/360 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 +K + YI++ +++ + I+ I+ V I ++I+ + L I++ IP Sbjct: 5 LKRIDWYIIKQFLGTYVFAIALIISISVVFDINEKIDKFLNPDVPLKAIIVDYYLNFIPY 64 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + +E++ + +G S L+ P A +++I FI Sbjct: 65 FANLFSPLFTFIAVIFFTSKLADRSEIIAMLASGMSFRRLMLPYAVSATIIAIVTFILNA 124 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF-IVDS 178 I P T K Y++ ++ + Y+ + + F + Sbjct: 125 YIIPPANETRIDFQNKYIRNKKVDYVKNAQ-LEIEPGVIAYFDSYDARSNMGYRFSLEHF 183 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 D + A+S D Q + D + + + I+ K TL ++ Sbjct: 184 EDKKLISRLTAKSIKYDSLYQ-WTVIDYMIRDFDGMREHITEGSRKDTTLTIVPSDFLIS 242 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 V L ++T++ E+HKR + I I + R + Sbjct: 243 VNDCETMTTPELNTYINRQKKRGIGNIQTFQIEYHKRFATIMAAFILTSIG-ASLSSRKI 301 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMIKK 356 I ++LS S + F + N Y P + ++ + I + + +K Sbjct: 302 KGGMGMNIGIGLALSFS---YILFMTVTSTFAINGYVSPAVAAWIPNIVYTFIAIFLYQK 358 >gi|209921759|ref|YP_002295843.1| hypothetical protein ECSE_4568 [Escherichia coli SE11] gi|209915018|dbj|BAG80092.1| conserved hypothetical protein [Escherichia coli SE11] Length = 360 Score = 98.1 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 53/361 (14%), Positives = 126/361 (34%), Gaps = 11/361 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + + I++ ++ + + + L + +P Sbjct: 5 GVLDRYIGKTI---FTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVP 61 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L + + +EL+++ +G +R+ + V+ AI L + Sbjct: 62 KDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIG 121 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-D 177 + P+ + A+A + ++ L+ + ++ ++ I + + GI I Sbjct: 122 EWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNN-FVYIERVKGDEEFGGISIYAF 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + + YA + D + + L+ E +P S ++ Sbjct: 181 NENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + ++S L N + Y+ ++ Q L + L+++ Sbjct: 241 VVALDPDALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 IS F V F + P +L F + S++LLM K Sbjct: 300 LRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRK 359 Query: 356 K 356 Sbjct: 360 S 360 >gi|307718797|ref|YP_003874329.1| permease YjgP/YjgQ family protein [Spirochaeta thermophila DSM 6192] gi|306532522|gb|ADN02056.1| permease YjgP/YjgQ family protein [Spirochaeta thermophila DSM 6192] Length = 361 Score = 98.1 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 44/356 (12%), Positives = 110/356 (30%), Gaps = 5/356 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + L FL + L V I +I + + + + +L + +P Sbjct: 1 MRVITRFALSWFLPLFLAALLSFVTILELIDLFTNLVAYIDADLTTFQILHLQLLYLPKC 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P L S++ + EL+ + G S + P + +L S F E + Sbjct: 61 VTYSLPIATLFAVAFSLGSLHASNELIALFGAGISLYRFVLPFVVCGLLFSGAYFFIEEL 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSR 179 + + ++L A + + + ++ L + +Y+ ++T+ + + + Sbjct: 121 LAIPSLTQKQELMAILMGRTSPTQVVNVTLVGEENRLVVHTRRYDDRSHTITRVLVYEKD 180 Query: 180 DTQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + A+ G+ D D++ +L + + ++ F+ Sbjct: 181 EEGEFASRIEAERGTWDPDQREWVLQRVRRYIRDEE-GNLKEESFEKLRTDLGEIQPEDF 239 Query: 239 --VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + D+ ++++KR++ I L++ A + Sbjct: 240 LQTRHSIDKMTLAEAGRWIQTLKRAGLPYREALTDYYKRISFAFTSFIVALLATSVAGRF 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 + + + P L + +F SI Sbjct: 300 KANALLLSLLLSLSIGVSYYVFQMVTTLFAKLGYLPPVVGAWLPVLVFFSGSILFF 355 >gi|262382043|ref|ZP_06075181.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262297220|gb|EEY85150.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 361 Score = 98.1 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 59/360 (16%), Positives = 126/360 (35%), Gaps = 10/360 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 +K + YI++ +++ + I+ I+ V I ++I+ + L I++ IP Sbjct: 5 LKRIDWYIIKQFLGTYVFAIALIISISVVFDINEKIDKFLNPDVPLKAIIVDYYLNFIPY 64 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + +E++ + +G S L+ P A +++I FI Sbjct: 65 FANLFSPLFTFIAVIFFTSKLADRSEIIAMLASGMSFRRLMLPYAVSATIIAIVTFILNA 124 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF-IVDS 178 I P T K Y++ ++ + Y+ + + F + Sbjct: 125 YIIPPANETRIDFQNKYIRNKKVDYVKNAQ-LEIEPGIIAYFDSYDARSNMGYRFSLEHF 183 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 D + A+S D Q + D + + + I+ K TL ++ Sbjct: 184 EDKKLISRLTAKSIKYDSLYQ-WTVIDYMIRDFDGMREHITEGSRKDTTLTIVPSDFLIS 242 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 V L ++T++ E+HKR + I I + R + Sbjct: 243 VNDCETMTTPELNTYINRQKKRGIGNIQTFQIEYHKRFATIMAAFILTSIG-ASLSSRKI 301 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMIKK 356 I ++LS S + F + N Y P + ++ + I + + +K Sbjct: 302 KGGMGMNIGIGLALSFS---YILFMTVTSTFAINGYVSPAVAAWIPNIVYTFIAIFLYQK 358 >gi|254294287|ref|YP_003060310.1| permease YjgP/YjgQ family protein [Hirschia baltica ATCC 49814] gi|254042818|gb|ACT59613.1| permease YjgP/YjgQ family protein [Hirschia baltica ATCC 49814] Length = 368 Score = 98.1 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 52/332 (15%), Positives = 113/332 (34%), Gaps = 23/332 (6%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSST-ESLNILLKISGYLIPTV 60 + YI LM+ I+ ++ +++++ V + T SL +++ P + Sbjct: 4 SRIQTYIFWECVAGLLMTLGIILGAILLVDMVEQLRTVGARTELSLLGAFQLTALKAPQL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + PF + + + +NR++EL I +G S + P FLA L + Sbjct: 64 ILETMPFAILVGSMLAYSKLNRSSELSAIRASGVSAWRFLAPTFFLAAFLGCIAMTIIDP 123 Query: 121 IEPKCRSTIKQLSAKAQLA----LTFSYLEENLFFRLDDDLY--IKISKYNP--NNTLQG 172 + + + + ++ ++ R D + + P N++LQ Sbjct: 124 LATFSNAKYETEKTLLLDDTGAVKDSAKRQKKVWLRQGTDTTQSVIHGEVLPNDNSSLQN 183 Query: 173 IFIV----DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 + I D + + + A+ ++ + V S ++ I L Sbjct: 184 VEIFILEKDGDEFEFQRRIDAKKATLRPGFWQLE----GVTEYSSDNEPIKQ---DYLAL 236 Query: 229 QTESANSSTIVLKANDQNLSFLLNPN-PNNPNYRPELLETYRSEFHKRLTQWLFPVIFGL 287 T S+ + +++++SF P + + Y + H L + L Sbjct: 237 TTTLDPSTILDRGTDEKSISFWKLPQLIQDARRAGLDADKYILKLHTLLAMPVLLGAMAL 296 Query: 288 ISIVAADKRALVRQRKKIHPIFISLSISFGVF 319 I V L R + + F +F Sbjct: 297 IGAVVCL--RLRRSGGVTQLLAAGIGAGFLLF 326 >gi|264678997|ref|YP_003278904.1| permease YjgP/YjgQ [Comamonas testosteroni CNB-2] gi|262209510|gb|ACY33608.1| permease YjgP/YjgQ [Comamonas testosteroni CNB-2] Length = 367 Score = 98.1 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 63/378 (16%), Positives = 134/378 (35%), Gaps = 32/378 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS--TESLNILLKISGYLIP 58 MK I R + ++ L L + + + ++ + V S + L IP Sbjct: 1 MKVLRNLIYREVIQAVLYVSLAFLALFFFFDLVDEMRWVGSGNAGYTATRALLFVALSIP 60 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 L + P + V+ +++E I+ +G ++ +L L + + + Sbjct: 61 GHLYELMPIAVLIGAIFVMAKFAQSSEFTIMRTSGMGPWLALRTLLILGMSFVLLTVLVG 120 Query: 119 NIIEPKCRSTIKQLSA----KAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF 174 + I P + ++L + T ++L+E + D + I + + Sbjct: 121 DYIAPAADNFSQKLRVVSKGQISRGATGAWLKEK---QGDHSVAINVGAVKSPGDFVNVR 177 Query: 175 IVD-SRDTQTHKIYYAQSGSIDLDRQAIIL---------NDGEVHRKSPISKDISIMKFK 224 I + + AQS +D DR+ L DG+V + SPIS+ Sbjct: 178 IFEFDSKGRIAAQINAQSAQVDEDREQWTLQGVQGSKVAQDGDVTKLSPISEASM----- 232 Query: 225 SYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVI 284 ++ + +A S +LK D+ + L + + + Y EF +++ L ++ Sbjct: 233 NWPTKVTAAMVSGALLKP-DRMTTIALFQFIRHLQDNGQAAQKYEIEFWRKVFYPLSCLV 291 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYL 341 ++++ A R +F + F F YI P+ Sbjct: 292 MVVLALPFA--YLHFRSGGITAYVFGGVMAGISFFLLNNVFGYIGTLQSWWPWLAAAAPG 349 Query: 342 FLFCISSI--FLLMIKKK 357 L+ S+ F ++ ++ Sbjct: 350 LLYTALSLSAFGWLVLRR 367 >gi|82779328|ref|YP_405677.1| hypothetical protein SDY_4286 [Shigella dysenteriae Sd197] gi|81243476|gb|ABB64186.1| conserved hypothetical protein [Shigella dysenteriae Sd197] Length = 361 Score = 98.1 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 54/361 (14%), Positives = 126/361 (34%), Gaps = 11/361 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + + I++ ++ + + + L + +P Sbjct: 6 GVLDRYIGKTI---FTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVP 62 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L + + +EL+++ +G +R+ + V+ AI L + Sbjct: 63 KDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIG 122 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-D 177 P+ + A+A + ++ L+ + ++ ++ I + + L GI I Sbjct: 123 EWAAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNN-FVYIERVKGDEELGGISIYAF 181 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + + YA + D + + L+ E +P S ++ Sbjct: 182 NENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLG 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + ++S L N + Y+ ++ Q L + L+++ Sbjct: 242 VVALDPDALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGP 300 Query: 297 ALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 IS F V F + P +L F + S++LLM K Sbjct: 301 LRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRK 360 Query: 356 K 356 Sbjct: 361 S 361 >gi|119503286|ref|ZP_01625370.1| hypothetical protein MGP2080_11498 [marine gamma proteobacterium HTCC2080] gi|119460932|gb|EAW42023.1| hypothetical protein MGP2080_11498 [marine gamma proteobacterium HTCC2080] Length = 353 Score = 97.7 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 41/319 (12%), Positives = 102/319 (31%), Gaps = 8/319 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y+ + + + +V + + ++ ++ +S L + +P Sbjct: 1 MGRFDRYLAGNVLGATVGVLAVLVGLDALSSVIDELDDLSPD-YGFTDALIYVAFTLPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L PF + L + +EL ++ G S L L A+LL++ F+ Sbjct: 60 LHEYVPFAALIGALVGLGRLAATSELTVVRAAGRSLPQLALGTLRPALLLAVLGFLVGEF 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI-FIVDSR 179 + P A AQ + + ++ R D D +I +S + G+ + Sbjct: 120 VSPVAEQFAVSHKALAQGSQSSFTGRGGVWNR-DGDTFIHVSAVERGGIIHGVQLLTFDE 178 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + + A+ G+ + +L + + + + + + Sbjct: 179 ERRLTRSLRAERGTYQGGQ--WLLEKVSRTELTQDRAVTDALIQQVWETEVTPQLLALEA 236 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFP--VIFGLISIVAADKRA 297 + + L P + + F +++ Q ++ +S + R Sbjct: 237 VALDSLPTLEL-WPYAQYLRKQGLMYRDVELAFWRKVLQPFAVAGLVLVAMSFIFGPLRE 295 Query: 298 LVRQRKKIHPIFISLSISF 316 + + I + Sbjct: 296 GSLGARIFTGVIIGVVFRI 314 >gi|332976302|gb|EGK13159.1| permease YjgP/YjgQ [Psychrobacter sp. 1501(2011)] Length = 467 Score = 97.7 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 75/178 (42%), Gaps = 2/178 (1%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 + R + + + F++ + ++++ + + + +L I GY +P L +V P Sbjct: 1 MTRQVASTTALVLGFLLVLLLGGRMIRYFGIAAEGRLDVGLLFAIIGYNLPYFLELVLPL 60 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 F + V + + E+ +++ +G SR L + ++ +LL +F +P Sbjct: 61 SFFIGLMLVFGRLYVDQEMAVLNGSGISRGRLARLMIPFILLLFVFEAGLSLYGKPWGVR 120 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSRDTQTH 184 + + + L+ F + F DD ++ + N + T LQ + +V + D Sbjct: 121 NSENIWQQQSLSSAFDLIRPQTFIS-SDDYHLYVGSMNDDRTELQDVILVQTADQGIT 177 Score = 45.0 bits (105), Expect = 0.018, Method: Composition-based stats. Identities = 29/207 (14%), Positives = 66/207 (31%), Gaps = 26/207 (12%) Query: 180 DTQTHKIYYAQS-----GSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 ++ I A+ GS D + L G + S + + F+ Y + Sbjct: 240 KSERDVIVLAKRAVQVAGSDTGDTTQLDLFQGRRYEVGADSLVYNQVSFERYRISINQPP 299 Query: 235 SSTIVLKA-NDQNLSFLL---------------NPNPNNPNYRPEL----LETYRSEFHK 274 I Q L L +P +P + + ++E Sbjct: 300 KDIITDDNVATQTLPVLWQAATGQAAPVIDLSVDPTKASPVKTQKPDAQQVIAAQAELGY 359 Query: 275 RLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY 334 RLT ++ ++++ A R + ++ P I + V + K + Sbjct: 360 RLTLPWLIILAPMLAVPLAQVRPRQGRWLRLLPAIIIYASCALVIISLKNSVTKGSVSVL 419 Query: 335 YIPILYLFLFCISSIFLLMIKKKYTKI 361 P+ + F + +++L + + ++ Sbjct: 420 SYPLT-IIGFMVLALYLNWASRLHHRV 445 >gi|332160138|ref|YP_004296715.1| hypothetical protein YE105_C0514 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318607296|emb|CBY28794.1| putative Permease [Yersinia enterocolitica subsp. palearctica Y11] gi|325664368|gb|ADZ41012.1| hypothetical protein YE105_C0514 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330859698|emb|CBX70034.1| lipopolysaccharide export system permease protein lptG [Yersinia enterocolitica W22703] Length = 356 Score = 97.7 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 51/358 (14%), Positives = 122/358 (34%), Gaps = 6/358 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI R I + LM+ +V ++ +I+ + ++ V S + IP + Sbjct: 3 GVLDRYIGRTILNTILMTLFMLVSLSGIIKFVDQLRKVGQGDYSAASAGMYTLLSIPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ +EL+++ +G +R+ + V+ AI L + + Sbjct: 63 EIFFPMAALLGALLGLGTLATRSELVVMQASGFTRMQIAASVMKTAIPLVLLTMAIGEWV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV--DSR 179 P+ + A+ + + L+ + D +I I + + + L G+ I D + Sbjct: 123 APQGEQMARNFRAQQMYGGSLLSTQSGLWAKDGSD-FIYIQRVSGDKELTGVNIYHFDKQ 181 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 D + + YA + + + + + D E +P S + + Sbjct: 182 D-RLLSVRYAATATFEDNLWRLSQVD-ESDLSNPNKVTGSQTLTGEWKTNLTPEKLGVVA 239 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + + ++S L + + Y ++ + L+++ Sbjct: 240 MNPDSLSISGL-HDYSKYLRQSGQESSRYELNMWGKIFAPFSVAVMMLMALSFIFGPLRS 298 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I F V + + P I L + + L++K++ Sbjct: 299 VPMGVRVVTGIFFGFVFYVLDQIFGPLSLVYNIPPVIGALLPSILFLLISVYLLLKRR 356 >gi|126664027|ref|ZP_01735021.1| hypothetical protein FBBAL38_12830 [Flavobacteria bacterium BAL38] gi|126623976|gb|EAZ94670.1| hypothetical protein FBBAL38_12830 [Flavobacteria bacterium BAL38] Length = 474 Score = 97.7 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 42/245 (17%), Positives = 83/245 (33%), Gaps = 17/245 (6%) Query: 13 GRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAME 72 +F + + FI + I I ++ L + K + PT++PMV P + Sbjct: 1 MITFTTVFVILFFIFVLQGIWLFIAELAGKDLDLFTIFKFLTFYAPTIVPMVLPLSVLLA 60 Query: 73 TTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQL 132 S N E + ++G S +K + +L++ F N + P + L Sbjct: 61 AIMTFGSFAENYEFAAMKSSGISLQRAMKMLTITIGILALVSFFFANNVIPDAQFRFINL 120 Query: 133 SAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT--LQGIFIVDSRDT---QTHKIY 187 + E F + IK+ K +N L+G+ + + + I Sbjct: 121 RKDIVQQKPAMAIVEGQFNTIGTSN-IKVDKKTGDNGEFLEGVTMHVKNNNMGLGANTII 179 Query: 188 YAQSGSI----DLDRQAIILNDGEVHR-------KSPISKDISIMKFKSYTLQTESANSS 236 A+ G + D + + L DG + + + FK Y + + + Sbjct: 180 KAKRGVLTSQDDSNYLQLELYDGYYYEDIHPKKYEERKRLPFTKSSFKKYVINIDLTKLN 239 Query: 237 TIVLK 241 + Sbjct: 240 QSNID 244 >gi|195940456|ref|ZP_03085838.1| inner membrane protein [Escherichia coli O157:H7 str. EC4024] gi|295097698|emb|CBK86788.1| Predicted permeases [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 360 Score = 97.7 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 54/361 (14%), Positives = 125/361 (34%), Gaps = 11/361 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + + I++ ++ + + + L + +P Sbjct: 5 GVLDRYIGKTI---FTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVP 61 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L + + +EL+++ +G +R+ + V+ AI L + Sbjct: 62 KDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIG 121 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-D 177 + P+ + A+A + ++ L+ + + ++ I + ++ L G+ I Sbjct: 122 EWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGQN-FVYIERVKGDDELGGVSIYAF 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + D + + YA S D + + L+ E +P S ++ Sbjct: 181 NNDRRLQSVRYAASAKFDANNKLWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + ++S L N + Y+ ++ Q L + L+++ Sbjct: 241 VVALDPDALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 IS F V + + P I L L I L M+ K Sbjct: 300 LRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGAL-LPSASFFLISLWMLLK 358 Query: 357 K 357 + Sbjct: 359 R 359 >gi|220916597|ref|YP_002491901.1| permease YjgP/YjgQ family protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219954451|gb|ACL64835.1| permease YjgP/YjgQ family protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 360 Score = 97.7 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 51/347 (14%), Positives = 119/347 (34%), Gaps = 13/347 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + +FL++ +V I + + + + + L +L++ Y V+ Sbjct: 2 ILFRYVARRMLGAFLVALTGVVGIYLAVDFVDNASAYTGAGW-LPAVLQLYAYKAAGVVY 60 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 MV P + + + E + G L PVL + +L L + +++ Sbjct: 61 MVAPAALILGAGIATSMFRQTREYTAMRAVGLGPWRLAVPVLAVTLLAGGVLVVLNDLVG 120 Query: 123 PKCRSTIKQLSA--KAQLALTFSYL---EENLFFRLDDDLYIK-ISKYNPNNTLQGIFIV 176 + ++++A A+ +L E +FR D + + P+ + + + Sbjct: 121 VQAAERAEEITAHRFARGGNLRRFLAAREPKRWFRGMDGKRVYHLRGNLPDGGFERVTVY 180 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGE-VHRKSPISKDISIMKFKSYTLQTESANS 235 + + + D +A IL D E + S + K Y Sbjct: 181 EL-GEGFTLARRIDAARMHPDGRAWILEDVEDRTFRQDGSMGLERADRKRYAFDEPPDAF 239 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + I K + + L+ + + ++ E + RL L + + A Sbjct: 240 AVIAGKPDQMRWNTLIRQ-IGIRKRLGQPVTEFQLERYDRLAYPLAGI--PGALLALALA 296 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 R+ + ++ ++ +FWG + + + P + + Sbjct: 297 LRRDRKGHLAAALLEAVGVTL-LFWGMQGVSSALGLSGRVAPWIASW 342 >gi|209363910|ref|YP_001424259.2| hypothetical membrane spanning protein [Coxiella burnetii Dugway 5J108-111] gi|207081843|gb|ABS76872.2| hypothetical membrane spanning protein [Coxiella burnetii Dugway 5J108-111] Length = 372 Score = 97.7 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 52/331 (15%), Positives = 121/331 (36%), Gaps = 21/331 (6%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ + I + L + L ++ I Q + +N ++ ++ +++I +P +L + Sbjct: 7 RYLCKEILGTLLATTLILLIIFMTNQFVHYLNDAAAGKITVKAVMEIMSLQVPLLLGYLL 66 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + L M + E++I+ G SR ++ ++ LA + + + +EPK Sbjct: 67 PLGLFLGGLFALGRMAVDHEMVILTACGVSRAQIVGMLIVLATFIGVIVAWLMLSVEPKM 126 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRL-DDDLYIKISKYNPNNT-LQGIFIVDSRDT-- 181 + ++ A + + F L + N ++ + +F+ S Sbjct: 127 QWYRVKILKDAVATASLEKIVPGRFQPLSSNGQVFYAGGVNDHHQKMLNVFLAQSETAGG 186 Query: 182 -QTHKIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 Q + A S I+ +G + P +MKF Y ++ S Sbjct: 187 KQRWDLVSADQAGEYSTAKGENFILFKNGFRYVGIPGELKYDVMKFGEYGIRLTSPAM-D 245 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 I + + S L + + + +E R+ L +F L+ + ++ Sbjct: 246 ITGRVDAMPTSKLWHLHSKDL--------KAAAELQWRIAMPLSVWLFALLIVSLSEANP 297 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHK 328 ++ K + ++ I G + F ++ Sbjct: 298 ---RKGKFAQMLPAVLIYIG-YANFMFLGRT 324 >gi|330997889|ref|ZP_08321723.1| permease, YjgP/YjgQ family [Paraprevotella xylaniphila YIT 11841] gi|329569493|gb|EGG51263.1| permease, YjgP/YjgQ family [Paraprevotella xylaniphila YIT 11841] Length = 368 Score = 97.3 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 57/374 (15%), Positives = 134/374 (35%), Gaps = 34/374 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 + ++Y+++ ++ S I+ IA V + I+ +++ I+ + +P Sbjct: 8 ISKLDVYLIKKFLGTYFFSIALIISIAVVFDFNENIDKFTTNHAPWKGIIFEYYANFVPY 67 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + G S L++P + A ++++ F+ Sbjct: 68 FSNLFSPLFVFISVIFFTSKLAENSEIIAMMAAGMSFKRLMRPYMISAAIIAVMTFLLGA 127 Query: 120 IIEPKC---RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + PK R + K + ++ ++D + I ++ F + Sbjct: 128 YVIPKGSVTRLNFENTYKKKKRTEFAQNVQ----LQVDTGVIAFIEHFDGRTKTGYHFSL 183 Query: 177 DS-RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 D + + A S S D L+D E + + + +K + S Sbjct: 184 DKFVNKKLVSHLTAASVSYDT------LSD-ERYHWRINNYTLRELKGMREYISHGSRID 236 Query: 236 STIVLKANDQNLS-----FLLNPNPNNPNYRPELLET-----YRSEFHKRLTQWLFPVIF 285 S I ++ +D L+ L +P + + + E+ KR I Sbjct: 237 SIIAMEPSDFLLTRNQQETLTSPELKEYIVKQRARGSGNVKPFEVEYQKRFATPFASFIL 296 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISF-GVFWGFSYIIHKIEQNPYYIPIL--YLF 342 +I + R+RK +++ + ++ + F + N + P L +L Sbjct: 297 TIIGLSL-----SARKRKGGMGLYLGIGLALSASYILFQTVSSTFAINADWPPALAAWLP 351 Query: 343 LFCISSIFLLMIKK 356 + I + KK Sbjct: 352 NIIFAFIAFFLYKK 365 >gi|330448736|ref|ZP_08312383.1| conserved hypothetical protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492927|dbj|GAA06880.1| conserved hypothetical protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 357 Score = 97.3 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 51/358 (14%), Positives = 130/358 (36%), Gaps = 7/358 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I + ++ +V ++ +I+ ++++ V + L L +P + Sbjct: 3 KILDWYIGRTIIATSALTLSTLVGLSAIIKYVEQLRKVGQGSYDLLKALYFVLLSMPQDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ +G S++ + L A+ + I + + Sbjct: 63 IMFFPMAVLLGALIGLGMLASSSELVVMQASGFSKLDIGLSTLKTAVPMMIIVVLLGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQ--GIFIVDSR 179 P+ + ++ + + + ++ + D+D +I + + + N + I+ D++ Sbjct: 123 APQAQKMAREYRSAWVYGGSVIAAQSGVWAKNDND-FIYMGRVHDLNKVDVVNIWKFDNK 181 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-DISIMKFKSYTLQTESANSSTI 238 A++ S D ++D + + SK S + + + + Sbjct: 182 GKLEDVT-SAKTASYDKS-TGWTMHDVTITDTAGNSKLTNSHVASMKWDTTMTPDKLAVV 239 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 +K + LS L N + + Y F ++ Q + L+++ Sbjct: 240 TVKPEELPLSGLYN-YVSYLKESKQDASRYELAFWRKALQPFSIAVMMLLALSFVFGPLR 298 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + +F + + + + P I L L + L+ +K Sbjct: 299 SVTMGARVLSGVIFGFAFYISDQVFGPMILVYRLPPIIGALGPSLVFLFITIYLLRRK 356 >gi|167763060|ref|ZP_02435187.1| hypothetical protein BACSTE_01426 [Bacteroides stercoris ATCC 43183] gi|167699400|gb|EDS15979.1| hypothetical protein BACSTE_01426 [Bacteroides stercoris ATCC 43183] Length = 380 Score = 97.3 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 56/369 (15%), Positives = 133/369 (36%), Gaps = 19/369 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 +K + YI++ +++ + I+ IA V ++++ S I+ IP Sbjct: 22 LKRLDWYIIKKFLGTYVFAIALIISIAVVFDFNEKMDRFMSHEAPWQAIIFDYYMNFIPY 81 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + +TG S +++P + A +++I F + Sbjct: 82 FANLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMLRPYMVSAAIIAITTFCLGS 141 Query: 120 IIEPKC---RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + PK R + K + + T ++ +D + I ++ + F + Sbjct: 142 YVIPKGSVTRLNFEDKYYKPRKSTTARNIQ----LEVDSGVIAYIERFEDYSKTGYRFSL 197 Query: 177 DS-RDTQTHKIYYAQSGSIDLDRQA-IILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 D +D Q A+S + D + D + + + SI+K + Sbjct: 198 DKFKDKQLVSHLTARSITYDTAAVHKWKVKDYMIREMDGMRE--SIVKGERLDTILFMEP 255 Query: 235 SSTIVLKANDQNLS--FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + +++K + L+ L ++ + E+HKR+ I LI + Sbjct: 256 ADFLIMKNQQEMLTSPQLSEYIDRQRQRGFANIKEFEIEYHKRIAMSFASFILTLIGVSL 315 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF-LFCISSIFL 351 + + + + + F I N P++ ++ + + Sbjct: 316 ----SSKKTKGGMGLHLGIGLGLSFSYILFQTIASTFAVNGNVPPVIAVWIPNLLYAFIA 371 Query: 352 LMIKKKYTK 360 + KK K Sbjct: 372 FYLYKKAPK 380 >gi|313887034|ref|ZP_07820734.1| permease, YjgP/YjgQ family [Porphyromonas asaccharolytica PR426713P-I] gi|312923560|gb|EFR34369.1| permease, YjgP/YjgQ family [Porphyromonas asaccharolytica PR426713P-I] Length = 361 Score = 97.3 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 50/352 (14%), Positives = 128/352 (36%), Gaps = 23/352 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 + + + YI ++ S + I+ +A + ++++ + L I+ +P Sbjct: 6 ISTVDRYIFTQFLATYFFSIVLILAVAIAFDVTEKLDKLLQPEVPLRAIIWDYYANFVPY 65 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + V + + N+E++ I + G S L+KP + A +++I F+ + Sbjct: 66 YANLFSPLFVFIAVIYVTSRLAENSEIIAILSCGVSFRRLLKPYMLGAAVIAILTFLLSS 125 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFF-------RLDDDLYIKISKYNPNNTLQG 172 + P ++ Y+++ ++ + ++ +S YN + + Sbjct: 126 FVIPPGNR--------IRIDFQNRYIKDKRITYANAIQMQVAPETFMFMSYYNDESKVGY 177 Query: 173 IFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 F +D + + K + + L D + S+++ Sbjct: 178 TFSMDRFEGKDLKSRMMANSIVYDTLHNWQLQDYTITYFGERQD--SLLRGNQLDTIIPI 235 Query: 233 ANSSTIVLKAN-DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 +V + + + + L + R + Y E HKR+ I L+ + Sbjct: 236 TPKDFLVTEGDVEMLTTPQLYRSIQQQRMRGAATQLYAIELHKRIAMIPASFILTLMGVS 295 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 + ++ R+ + + LS+SF ++ F + P++ +L Sbjct: 296 LSARK---RKGGMGLALAVGLSLSF-LYILFMTVTSSFAVTGAMSPMVAAWL 343 >gi|329954892|ref|ZP_08295909.1| permease, YjgP/YjgQ family [Bacteroides clarus YIT 12056] gi|328526996|gb|EGF54007.1| permease, YjgP/YjgQ family [Bacteroides clarus YIT 12056] Length = 380 Score = 97.3 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 56/369 (15%), Positives = 133/369 (36%), Gaps = 19/369 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 +K + YI++ +++ + I+ IA V ++++ S I+ IP Sbjct: 22 LKRLDWYIIKKFLGTYVFAIALIISIAVVFDFNEKMDRFMSHEAPWKAIIFDYYMNFIPY 81 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + +TG S +++P + A +++I F + Sbjct: 82 FANLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMLRPYMVSAAIIAITTFCLGS 141 Query: 120 IIEPKC---RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + PK R + K + + T ++ +D + I ++ + F + Sbjct: 142 YVIPKGSVTRLNFEDKYYKPRKSTTARNIQ----LEVDSGVIAYIERFEDYSKTGYRFSL 197 Query: 177 DS-RDTQTHKIYYAQSGSIDLDRQA-IILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 D +D Q A+S + D + D + + + SI+K + Sbjct: 198 DKFKDKQLVSHLTARSITYDTAAVHKWKVKDYMIREMDGMRE--SIVKGERLDTILFMEP 255 Query: 235 SSTIVLKANDQNLS--FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + +++K + L+ L ++ + E+HKR+ I LI + Sbjct: 256 ADFLIMKNQQEMLTSPQLSEYIDRQRQRGFANIKEFEIEYHKRIAMSFASFILTLIGVSL 315 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF-LFCISSIFL 351 + + + + + F I N P++ ++ + + Sbjct: 316 ----SSKKTKGGMGLHLGIGLGLSFSYILFQTIASTFAVNGNVPPVIAVWIPNLLYAFIA 371 Query: 352 LMIKKKYTK 360 + KK K Sbjct: 372 FYLYKKAPK 380 >gi|307129164|ref|YP_003881180.1| hypothetical protein Dda3937_01300 [Dickeya dadantii 3937] gi|306526693|gb|ADM96623.1| conserved inner membrane protein [Dickeya dadantii 3937] Length = 356 Score = 97.3 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 48/357 (13%), Positives = 123/357 (34%), Gaps = 4/357 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + YI + I + +M+ +V ++ +I+ + ++ V S+ + +P + Sbjct: 3 RVLDRYIGKTIFNTIMMTLFMLVSLSGIIKFVDQLRKVGQGGYSVMGAGLYTLLSVPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ +EL+++ +G +R+ + V+ AI L + + Sbjct: 63 EIFFPMAALLGALLGLGTLATRSELVVMQASGFTRLQIAAAVMKTAIPLVLLTMAIGEWM 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI-VDSRD 180 P + ++ + + L+ + +D ++ I + N L G+ I + Sbjct: 123 APAGEQMARNYRSQMMYGGSMLSTQGGLWAKDGND-FVYIQRVAGENELAGVNIYHFDKQ 181 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ I YA S + + + R S + + + L Sbjct: 182 SKLLSIRYAASALYENGTWKLSQVEESDLRDSKQIGGSQTVS-GEWKTNLTPDKLGVVAL 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + ++ L + N + + Y+ +L L + L+++ Sbjct: 241 DPDALSIRGLFD-YINYLHQSGQEASRYQLNMWSKLFAPLSVAVMMLMALSFIFGPLRSV 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I IS F V + + P + + +L++K++ Sbjct: 300 PAGVRIVIGISFGFLFYVLDQIFGPLSLVYHIPPVLGASLPSALFLFISIMLLLKRR 356 >gi|215489604|ref|YP_002332035.1| predicted inner membrane protein [Escherichia coli O127:H6 str. E2348/69] gi|215267676|emb|CAS12134.1| predicted inner membrane protein [Escherichia coli O127:H6 str. E2348/69] Length = 360 Score = 97.3 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 53/361 (14%), Positives = 125/361 (34%), Gaps = 11/361 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + I++ ++ + + + L + +P Sbjct: 5 GVLDRYIGKTI---FTTIMMTLFMQVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVP 61 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L + + +EL+++ +G +R+ + V+ AI L + Sbjct: 62 KDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIG 121 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-D 177 + P+ + A+A + ++ L+ + ++ ++ I + + L GI I Sbjct: 122 EWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNN-FVYIERVKGDEELGGISIYAF 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + + YA + D + + L+ E +P S ++ Sbjct: 181 NENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + ++ L N + Y+ ++ Q L + L+++ Sbjct: 241 VVALDPDALSIRGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 IS F V F + P +L F + S++LLM K Sbjct: 300 LRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRK 359 Query: 356 K 356 Sbjct: 360 S 360 >gi|62182906|ref|YP_219323.1| putative permease [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62130539|gb|AAX68242.1| putative permease [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322717409|gb|EFZ08980.1| putative permease [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 360 Score = 97.3 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 52/361 (14%), Positives = 123/361 (34%), Gaps = 10/361 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + + I++ ++ + + + L + +P Sbjct: 5 GVLDRYIGKTI---FTTIMMTLFMLVSLSGIIKFVDQLKKAGQGNYDALGAGMYTLLSVP 61 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L + + +EL+++ +G +R+ + V+ AI L + Sbjct: 62 KDIQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAISLVLLTMAIG 121 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 + P+ + A+A + ++ L+ + ++ ++ I + + L GI I Sbjct: 122 EWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNN-FVYIERVKGDEELAGISIYVF 180 Query: 179 RDTQT-HKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSS 236 D + + YA S D + + L+ E ++P S ++ Sbjct: 181 NDQRRLQSVRYAASAKFDPEHKVWRLSQVDESDLQNPKQITGSQTVSGTWKTNLTPDKLG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + ++S L N + Y+ ++ Q L + L+++ Sbjct: 241 VVALDPDALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 IS F V + + P + L LM++K Sbjct: 300 LRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIVGALLPSASFFLISLWLMLRK 359 Query: 357 K 357 Sbjct: 360 S 360 >gi|221066428|ref|ZP_03542533.1| permease YjgP/YjgQ family protein [Comamonas testosteroni KF-1] gi|220711451|gb|EED66819.1| permease YjgP/YjgQ family protein [Comamonas testosteroni KF-1] Length = 367 Score = 97.3 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 58/373 (15%), Positives = 129/373 (34%), Gaps = 22/373 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS--TESLNILLKISGYLIP 58 MK I R + ++ L L + + + ++ + V S + L IP Sbjct: 1 MKVLRNLIYREVIQAVLYVSLAFLALFFFFDLVDEMRWVGSGNAGYTATRALLFVTLSIP 60 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 L + P + V+ +++E I+ +G ++ +L L + + + Sbjct: 61 GHLYELMPIAVLIGAIFVMAKFAQSSEFTIMRTSGMGPWLALRTLLILGMSFVLLTVLVG 120 Query: 119 NIIEPKCRSTIKQLSA----KAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF 174 + I P + ++L + T ++L+E + D + I + + Sbjct: 121 DYIAPAADNFSQKLRVVSKGQISRGATGAWLKEK---QGDHSVAINVGAVKSPGDFVNVR 177 Query: 175 IVD-SRDTQTHKIYYAQSGSIDLDRQAIILN--DGEVHRKSPISKDISIMKFKS--YTLQ 229 I + + AQS +D D + L+ G + +S + S + + Sbjct: 178 IFEFDSKGRIAAQINAQSAQVDEDEEQWTLHGVQGSKVAQEGDVTKLSPISEASMNWPTK 237 Query: 230 TESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 +A S +LK D+ + L + + + Y EF +++ L ++ +++ Sbjct: 238 VTAAMVSGALLKP-DRMTTIALFQFIRHLQDNGQAAQKYEIEFWRKVFYPLSCLVMVVLA 296 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCI 346 + A R +F + F F YI P+ L+ Sbjct: 297 LPFA--YLHFRSGGITAYVFGGVMAGISFFLLNNVFGYIGTLQSWWPWLAAAAPGLLYTA 354 Query: 347 SSI--FLLMIKKK 357 S+ F ++ ++ Sbjct: 355 LSLSAFAWLVLRR 367 >gi|332299879|ref|YP_004441800.1| permease YjgP/YjgQ family protein [Porphyromonas asaccharolytica DSM 20707] gi|332176942|gb|AEE12632.1| permease YjgP/YjgQ family protein [Porphyromonas asaccharolytica DSM 20707] Length = 361 Score = 97.3 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 48/351 (13%), Positives = 122/351 (34%), Gaps = 21/351 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 + + + YI ++ S + I+ +A + ++++ + L I+ +P Sbjct: 6 ISTVDRYIFTQFLATYFFSIVLILAVAIAFDVTEKLDKLLQPEVPLRAIIWDYYANFVPY 65 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + V + + N+E++ I + G S L+KP + A +++I F+ + Sbjct: 66 YANLFSPLFVFIAVIYVTSRLAENSEIIAILSCGVSFRRLLKPYMLGAAVIAILTFLLSS 125 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFF-------RLDDDLYIKISKYNPNNTLQG 172 + P ++ Y+++ ++ + ++ +S YN + + Sbjct: 126 FVIPPGNR--------IRIDFQNRYIKDKRITYANAIQMQVAPETFMFMSYYNDESKVGY 177 Query: 173 IFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 F +D + + K + + L D + + + Sbjct: 178 TFSMDRFEGKDLKSRMMANSIVYDTLHNWQLQDYTITYFGERQDSLLRGNQLDTIIPITP 237 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + + L + R + Y E HKR+ I L+ + Sbjct: 238 KDFLVTEGDVEMLSTPQLYR-SIQQQRMRGAATQLYAIELHKRIAMIPASFILTLMGVSL 296 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 + ++ R+ + + LS+SF ++ F + P++ +L Sbjct: 297 SARK---RKGGMGLALAVGLSLSF-LYILFMTVTSSFAVTGAMSPMVAAWL 343 >gi|198274616|ref|ZP_03207148.1| hypothetical protein BACPLE_00768 [Bacteroides plebeius DSM 17135] gi|198272063|gb|EDY96332.1| hypothetical protein BACPLE_00768 [Bacteroides plebeius DSM 17135] Length = 391 Score = 97.3 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 52/354 (14%), Positives = 125/354 (35%), Gaps = 8/354 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 +K + YI+ ++ + I+ IA V I + I+ ++ ++ I+ IP Sbjct: 33 LKRLDRYIIVKFLGTYFFAIALIISIAVVFDINENIDDFINNKAPISAIIFDYYLNFIPY 92 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + +TG S L+ P + A ++++ ++ Sbjct: 93 YTNLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRLMVPYMISAAIIALVTYVLST 152 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDS 178 + P T + + Y+ N+ +D + + +Y N T + Sbjct: 153 EVIPTGSVTRLKFEQVYKNKKRADYVR-NIQLEVDTGVIAYMERYEDYNKTAYRFSLDKF 211 Query: 179 RDTQTHKIYYAQSGSIDLDRQA-IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 D + A+ + D I+ D + + + I+ + E + Sbjct: 212 EDHKLVSHLTARRITYDTTTVHRWIIKDYMIREMKGMRETITRGGRMDSIINMEPQDFLI 271 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L ++ + E+++R+ I +I + + Sbjct: 272 TRGQQETMTSPQLREYIDKQKQRGFANIKVFEVEYYRRIATSFAAFILTVIGLS---LSS 328 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 R+ + I + +SF + F I N P L +++ I +F+ Sbjct: 329 QKRKGGMGLHLGIGIGLSFS-YILFQTISSTFAINGNAHPNLAVWIPNILYLFI 381 >gi|152973139|ref|YP_001338285.1| putative transmembrane protein, transport [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238892751|ref|YP_002917485.1| putative transport system permease component [Klebsiella pneumoniae NTUH-K2044] gi|330016469|ref|ZP_08308442.1| lipopolysaccharide export system permease protein LptG [Klebsiella sp. MS 92-3] gi|150957988|gb|ABR80018.1| putative transmembrane protein, transport [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238545067|dbj|BAH61418.1| putative transport system permease component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|328528830|gb|EGF55773.1| lipopolysaccharide export system permease protein LptG [Klebsiella sp. MS 92-3] Length = 360 Score = 97.3 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 55/361 (15%), Positives = 126/361 (34%), Gaps = 11/361 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + + I++ ++ + S + L + +P Sbjct: 5 GVLDRYIGKTI---FNTIMMTLFMLVSLSGIIKFVDQLKKSGQGSYDALGAGLYTILSVP 61 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L + + +EL+++ +G +R+ + V+ AI L + Sbjct: 62 KDIQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRLQVALAVMKTAIPLVLLTMAIG 121 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-D 177 + P+ + A+ + ++ L+ + + ++ I + N+ L G+ I Sbjct: 122 EWVAPQGEQMARNYRAQQMYGGSLLSTQQGLWAKDGHN-FVYIERVKGNDELGGVSIYAF 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + + YA S D + + L+ E P S M ++ Sbjct: 181 NPERRLQSVRYAASAKFDSENKVWRLSQVDESDLTDPKQVTGSQMVSGTWKTNLTPDKLG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + ++S L N + Y+ ++ Q L + L+++ Sbjct: 241 VVALDPDALSISGLHN-YVKYLKSSGQDPGRYQLNMWSKIFQPLSVAVMMLMALSFIFGP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 IS F V F + P +L F + S++L+M K Sbjct: 300 LRSVPMGVRVVTGISFGFIFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLMMRK 359 Query: 356 K 356 Sbjct: 360 A 360 >gi|42526554|ref|NP_971652.1| hypothetical protein TDE1044 [Treponema denticola ATCC 35405] gi|41816747|gb|AAS11533.1| membrane protein, putative [Treponema denticola ATCC 35405] Length = 357 Score = 97.3 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 60/363 (16%), Positives = 124/363 (34%), Gaps = 10/363 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y+L+ +F+++ LF + + + + I + ++K+ IP Sbjct: 1 MKLLQRYLLKLFIPTFVVAMLFFILLLQLGDLFANIVAYLQNGAQFKDIVKVMWLYIPKC 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + ++ EL I + G S P+L L S+ + E+ Sbjct: 61 IAYSVPLAILFAGSYTMGNLYAQNELTSIFSAGISLGRFTLPLLVLGFFFSVGMIFFEDN 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 + K QLS K ++ + + +N N TL +I+ R Sbjct: 121 VVIKYFYEKTQLSKKLLQEEESLDTQDLVILSELGKIVYTADYFNAENQTLANAYII-VR 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 D + +S + + + EV+R + + + +E + Sbjct: 180 DEDGNLSLVIKSSHMVWNEDRWTTDSAEVYRFDEKNSVSCLNNIPDNIILSEPPANFQKN 239 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L + D+ S++H+R + I SI K Sbjct: 240 LSSVDEMRISEAKEFIAALKKNGLPYYEALSKYHRRFSFPFTIFIVLFFSISLGGKF--- 296 Query: 300 RQRKKIHPIFISLSISFG-VFWGFSYIIHKIEQNPYYIPI--LYLFLFCISSIFLLMIKK 356 +K I + I S+ +F+ + + Y P+ + +F S + + ++KK Sbjct: 297 --KKNILLMSILFSLGIATLFYVTEMVTMLSAKWEYISPLAGAWTPIFIFSILSIFLLKK 354 Query: 357 KYT 359 T Sbjct: 355 SRT 357 >gi|222823976|ref|YP_002575550.1| permease, YjgP/YjgQ family [Campylobacter lari RM2100] gi|222539198|gb|ACM64299.1| putative permease, YjgP/YjgQ family [Campylobacter lari RM2100] Length = 341 Score = 97.3 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 56/355 (15%), Positives = 123/355 (34%), Gaps = 26/355 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+ + L + I ++ +Q + S SL L ++ YL+P Sbjct: 1 MKLIYKYLFNQFLNTMLSLFFTLFTIVSIVFFIQLAKITSYVEISLLELFQLYIYLLPKA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P F + T ++R E ++ G S + + +A +LS F+ + + Sbjct: 61 LAFTLPISFFIALTLSFYRLSRENESTVLFALGISPKFIASFFMKIAGVLSAFMLVVVLV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV--DS 178 P + T ++ F + + + I+ + NN + I + Sbjct: 121 FIPISFELFDNFV-DYKKISTKINIKTGEFGQRYGEWLVFINTQDENNVYKNIIMYHPKK 179 Query: 179 RDTQTHKIYYAQSGSIDLDRQAI--ILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + +I A G ++ + +LN G+ + + IS FK+ ++++ + Sbjct: 180 NEDDKEQIILASEGKLENQNGIVSFVLNQGKAYEFKEENWHIS--SFKNLLIKSKLYSKD 237 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 D + N + + Y L LF + FG+++ Sbjct: 238 LNTKHFYDY------WSDLNTSKEKAKEFVIYTLIALFPLASVLFALSFGIVTY------ 285 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + F I +F F+ ++ + + ++++ IS+ + Sbjct: 286 -------RYEKGFAYFGIFAVIFAYFTLLVSFYKPPLLAVGVIFILFLSISAFYF 333 >gi|237723640|ref|ZP_04554121.1| conserved hypothetical protein [Bacteroides sp. D4] gi|229437988|gb|EEO48065.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] Length = 390 Score = 97.3 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 53/346 (15%), Positives = 130/346 (37%), Gaps = 10/346 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPTV 60 K ++YI++ ++ + I+ IA V + + I+ ++ L I+ IP Sbjct: 33 KRLDIYIIKKFLGTYFFAIALIISIAVVFDVNENIDRFINNKAPLKAIVFDYYMNFIPYF 92 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +P + + + N+E++ + +TG S +++P + A ++S+ F Sbjct: 93 SNLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMMRPYMISAAIISVVTFGLGAY 152 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + PK T + + Y+ N+ +D + I +Y N F +D D Sbjct: 153 VIPKGNVTRLDFEDRYKKKKKQEYVR-NVQLEVDSGVIAYIERYENYNKTGYRFSLDKFD 211 Query: 181 TQTHKIY-YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + A+S + D + R+ ++ I + + ++ Sbjct: 212 DKKLVAHLTARSVTYDTVSVHKWTIKNYMIREMEGMRE-KITRGDRLDTIIKMEPQDFLI 270 Query: 240 LKANDQNLS--FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +K Q ++ L ++ + E+++R+ I I + + ++ Sbjct: 271 MKGQQQTMTSPELKEYIDKQKRRGFANIKEFEIEYYQRIAMSFAAFILTTIGVSLSSRKM 330 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 + + + L++SF + F + N PI+ +++ Sbjct: 331 ---KGGMGLHLGVGLALSFS-YILFQTVSATFAVNGNTPPIIAVWI 372 >gi|212710412|ref|ZP_03318540.1| hypothetical protein PROVALCAL_01473 [Providencia alcalifaciens DSM 30120] gi|212686832|gb|EEB46360.1| hypothetical protein PROVALCAL_01473 [Providencia alcalifaciens DSM 30120] Length = 358 Score = 97.3 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 61/365 (16%), Positives = 141/365 (38%), Gaps = 19/365 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI R I S LM+ +V ++ +I+ ++++ V + + +P + Sbjct: 3 GVLDRYIGRTILNSILMTLFLLVSLSGIIKFVEQLRKVGDGDYTAMSAGVFTLLTVPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ +EL+++ +G +R+ + V+ AI L I I I Sbjct: 63 DIFFPMAALLGALLGLGALASRSELVVMQASGFTRLQIAMSVMKTAIPLVIVTMIMGEWI 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + A+ + + + ++ + D +I I + +T+Q + I D Sbjct: 123 APAGEQWARNYRAEKIVGSSLVVTDSGMWAKDAHD-FIYIQRIKDASTIQDVSIYRFDDH 181 Query: 182 QT-HKIYYAQSGSIDLDRQAIILNDGE-----VHRKSPISKDISI---MKFKSYTLQTES 232 + + +A G+ D D++ +L+ + +K S+ ++ L S Sbjct: 182 RKLESVMFAARGTYDADKKLWVLSQVQESILGSQQKITGSQRLTYDWKTNLTPEKLGIVS 241 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 N+ ++ ++ Q +++L ++ Y+ +++ L + L+++ Sbjct: 242 LNADSLSIRGLYQYITYL--------KESGQVASVYQLSMWQKILAPLSAAVMMLMAVSF 293 Query: 293 ADKR-ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 V ++ + + + + GF P L LF SIFL Sbjct: 294 IFGPLRTVPMGVRVVSGIVGGFLFYILNQGFGNWSLVYSIPPVVAAALPSVLFLGVSIFL 353 Query: 352 LMIKK 356 L+ +K Sbjct: 354 LVKRK 358 >gi|154174487|ref|YP_001408138.1| permease YjgP/YjgQ [Campylobacter curvus 525.92] gi|153793102|gb|EAU00183.2| permease YjgP/YjgQ [Campylobacter curvus 525.92] Length = 342 Score = 97.3 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 72/365 (19%), Positives = 134/365 (36%), Gaps = 31/365 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTE-SLNILLKISGYLIPT 59 M Y+L +F S +F+ I +I V+S E + LLK+ +++P Sbjct: 1 MSRVNKYLLYNFLGTF-ASLFSTLFLIMSIVFFIQIARVTSYIEITFGELLKLYMFMLPR 59 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 VL V P F + L +++ E ++I G+S ++ K L + LS L I Sbjct: 60 VLLFVVPIAFFVALAMTLFRLSKENESIVIFTLGSSPNSIAKFFLAFSAALSALLLIVAI 119 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISK--YNPNNTL-QGIFIV 176 ++ P S + + + L+ F + D + + + N T+ + I + Sbjct: 120 VMIPIA-SELNSNFIDYKKTVAKLNLKPTQFGQKFSDWMVYVGSEGSDENGTIYKNIVMF 178 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + + ++ AQ+ + + + LN+G+++ K FKS T++T + Sbjct: 179 NPFIKDSQRLIVAQNAKMINTKSNIELSLNNGKIY--DMRGKVYHQSNFKSMTIRTAQSE 236 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 V + L R + L TY LFP+ L +I Sbjct: 237 KINDVDSIKEYWLEA------KTSTKRKKDLSTYVL-------VALFPLATTLFAISFGI 283 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY-IPILYLFLFCISSIFLLM 353 R K + FG+ +G+ +I + P IP ++ F F Sbjct: 284 --VTYRYEKGAVYLGT-----FGILFGYFTLIMLLSPRPIIAIPGVFAAFFAAGVWFYKF 336 Query: 354 IKKKY 358 + Sbjct: 337 KIMRR 341 >gi|167626385|ref|YP_001676885.1| hypothetical protein Fphi_0163 [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|241668816|ref|ZP_04756394.1| hypothetical protein FphipA2_08610 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254877348|ref|ZP_05250058.1| permease [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|167596386|gb|ABZ86384.1| conserved membrane protein of unknown function [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|254843369|gb|EET21783.1| permease [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 352 Score = 97.3 bits (241), Expect = 4e-18, Method: Composition-based stats. Identities = 45/205 (21%), Positives = 90/205 (43%), Gaps = 11/205 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + YI + + SFL+ L + ++ L +++ + + S L+ I+ Y +P + Sbjct: 3 LNRIDRYIFKTVFSSFLIVSLIFCILFFIFTYLAQVSN-NDTGASNIELIIITIYQLPGI 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P C + L+ + N+E++++ + G S + K V+ + I+ SI + Sbjct: 62 LYTLLPACAMVGALMGLSLLANNSEIIVLRSFGRSTAQIAKGVVLVGIIGSIVTMVFGGY 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 I P + K + T +Y +L+ + D IS +PN GI ++ Sbjct: 122 IAP--------VLQKLADSNTVAYNTHDLWLKTPDGFM-NISNIDPNEGKAYGIRKFITK 172 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILN 204 D Q ++ YA+ D A + N Sbjct: 173 DNQVQEVRYAEKAEYVNDATANVFN 197 >gi|256425866|ref|YP_003126519.1| permease YjgP/YjgQ family protein [Chitinophaga pinensis DSM 2588] gi|256040774|gb|ACU64318.1| permease YjgP/YjgQ family protein [Chitinophaga pinensis DSM 2588] Length = 359 Score = 97.3 bits (241), Expect = 4e-18, Method: Composition-based stats. Identities = 69/361 (19%), Positives = 123/361 (34%), Gaps = 6/361 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 M + YILR +F+ S + ++ I+ VI + ++I+ S+ S I++ IP Sbjct: 1 MTKIDWYILRKFIGTFIYSLMILLVISVVIDVTEKIDDFMSNNLSFYTIVVDYYFGFIPH 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + ++ P + + M TE++ I +G S ++P A L L++ Sbjct: 61 IAALLFPLFIFISVIFFTSKMAYRTEIVAILCSGVSFRRFLRPYWVGAFLFGGLLWLGNR 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-DS 178 P + A+ + R+D Y+ Y+PN F+ D Sbjct: 121 WTVPVANKIRTKFEAEYVHKKKAQLNMYDKTIRVDSFTYVTFGSYDPNYKSGSNFLYEDV 180 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 R A S D L+ + + + + + + Sbjct: 181 RGQNIKFKMKADRISWDSVAGKWKLDYVTMRAINGLKERWWSKTDTTIKIPLNPKEMYEE 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 L E L T+ E ++R VI LI Sbjct: 241 KNIQEAMTTPELDTYIAREELKGAEGLNTFYVEKYRRTASSGAVVILTLIG--GIIASKK 298 Query: 299 VRQRKKIH-PIFISLSISFGVFWGFSYIIH-KIEQNPYYIPILYLFLFCISSIFLLMIKK 356 VR +H + I +S S+ +F FS + K + NP + FLF + +L + Sbjct: 299 VRGGSGLHLAVGIVISASYIIFLQFSTVFSIKADLNPLLAVWIPNFLFGGLAFWLYLRAP 358 Query: 357 K 357 K Sbjct: 359 K 359 >gi|332704120|ref|ZP_08424208.1| permease YjgP/YjgQ family protein [Desulfovibrio africanus str. Walvis Bay] gi|332554269|gb|EGJ51313.1| permease YjgP/YjgQ family protein [Desulfovibrio africanus str. Walvis Bay] Length = 360 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 54/369 (14%), Positives = 127/369 (34%), Gaps = 22/369 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+LR + + + + + +R++ + L I+L IP + Sbjct: 1 MSVLSRYLLRQNLYLMSICLCLGIAVYLLSDLFERLDDFLEAGRGLKIMLVYFLVKIPLI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P F + L++M N ELL + G S +I L ++ S Sbjct: 61 ISQILPAVFLVAMLVQLSAMRSNRELLALRAGGISYKAIISFFLVYSLFWSGGQLFISQY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSR 179 + K K++ A+ + + + +D+ + I P + + + I Sbjct: 121 LGVKGLEYSKRIWAEDVRGKEYVTKTIHKLWLREDNDILHIDTVQPASGKGRNLSIYTLA 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIM-------KFKSYTLQTES 232 + + + + + + +LND + + + FKS+TL Sbjct: 181 QDRRSVVQFINAKTFEAKEGNWVLNDVIIIDPIRFTSEYKPTLKLSLGEAFKSFTLAESR 240 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 N + + L + + L +E R+ +H +L+ + +++++A Sbjct: 241 NNPAQLPLWELGRAIHQL--------EVTGSNVEGLRTIWHGKLS---YAFSITIMALLA 289 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 ++ + ++ +F+GF + + + PI +L I Sbjct: 290 LAIITFEH---NVYLNLTAGLVATFLFYGFFVLGSSAGEMGFLPPIAGAWLGNAVFILGA 346 Query: 353 MIKKKYTKI 361 + + I Sbjct: 347 TTRLFWRSI 355 >gi|206575795|ref|YP_002240776.1| putative permease [Klebsiella pneumoniae 342] gi|288937432|ref|YP_003441491.1| permease YjgP/YjgQ family protein [Klebsiella variicola At-22] gi|290512173|ref|ZP_06551540.1| permease [Klebsiella sp. 1_1_55] gi|206564853|gb|ACI06629.1| putative permease [Klebsiella pneumoniae 342] gi|288892141|gb|ADC60459.1| permease YjgP/YjgQ family protein [Klebsiella variicola At-22] gi|289775168|gb|EFD83169.1| permease [Klebsiella sp. 1_1_55] Length = 360 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 55/361 (15%), Positives = 127/361 (35%), Gaps = 11/361 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + + I++ ++ + S + L + +P Sbjct: 5 GVLDRYIGKTI---FNTIMMTLFMLVSLSGIIKFVDQLKKSGQGSYDALGAGLYTILSVP 61 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L + + +EL+++ +G +R+ + V+ AI L + Sbjct: 62 KDIQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRLQVALAVMKTAIPLVLLTMAIG 121 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-D 177 + P+ + A+ + ++ L+ + + ++ I + N+ L G+ I Sbjct: 122 EWVAPQGEQMARNYRAQQMYGGSLLSTQQGLWAKDGHN-FVYIERVKGNDELGGVSIYAF 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + + YA S D + + L+ E + P S M ++ Sbjct: 181 NPERRLESVRYAASAKFDSENKVWRLSQVDESNLTDPKQVTGSQMVSGTWKTNLTPDKLG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + ++S L N + Y+ ++ Q L + L+++ Sbjct: 241 VVALDPDALSISGLHN-YVKYLKSSGQDPGRYQLNMWSKIFQPLSVAVMMLMALSFIFGP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 IS F V F + P +L F + S++L+M K Sbjct: 300 LRSVPMGVRVVTGISFGFIFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLMMRK 359 Query: 356 K 356 Sbjct: 360 A 360 >gi|152981500|ref|YP_001354149.1| hypothetical protein mma_2459 [Janthinobacterium sp. Marseille] gi|151281577|gb|ABR89987.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 382 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 59/386 (15%), Positives = 122/386 (31%), Gaps = 32/386 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y IGRS L + + + ++ + V + +P Sbjct: 1 MKILQKYFSLEIGRSVLFVLIAFLALFAFFDLVGELKSVGHGGYKIQHAFLYVVLEMPGY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + T L+ +E I+ + S + +L + ++ ++ F+ Sbjct: 61 VYELMPIAALIGTIWALSQFAARSEFTIMRASSMSTAMVGAILLKIGVVFALITFVFGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFR-----------LDDDLYIKISKYNPNNT 169 + P + +++ +Q L+ + + ++ + + P+ Sbjct: 121 VVPITSNMAERIRVNSQGGALSQEFRSGLWTKDVIRSNGQEGEVLGSRFVNVRELRPDGK 180 Query: 170 LQGIFIVD-SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPIS-----------KD 217 L + I + +R+ + A S LNDG V Sbjct: 181 LMNLKIYEFNRNFHLTSLITAGSADY-AGANTWTLNDGTVAAFGESKLQGATTATDITTA 239 Query: 218 ISIMKFKSYTLQTESANS--STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKR 275 IS KFK+ +L +E S + L+N + Y K+ Sbjct: 240 ISTSKFKTQSLVSEMTPEILSVGFTDPATMSAIALVNYT-QYLSENNRDTVRYEIALWKK 298 Query: 276 LTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN--- 332 + +F ++++ R IF + I S H N Sbjct: 299 VVYPFA--VFVMMALALPFAYLHFRSGGVSLKIFTGIMIGVSFQLINSLFSHLGLLNTWP 356 Query: 333 PYYIPILYLFLFCISSIFLLMIKKKY 358 P+ IL LF ++ LM +++ Sbjct: 357 PFATAILPSLLFLTVAVGALMWVERH 382 >gi|28198043|ref|NP_778357.1| hypothetical protein PD0107 [Xylella fastidiosa Temecula1] gi|182680670|ref|YP_001828830.1| permease YjgP/YjgQ family protein [Xylella fastidiosa M23] gi|28056103|gb|AAO28006.1| conserved hypothetical protein [Xylella fastidiosa Temecula1] gi|182630780|gb|ACB91556.1| permease YjgP/YjgQ family protein [Xylella fastidiosa M23] gi|307579131|gb|ADN63100.1| permease YjgP/YjgQ family protein [Xylella fastidiosa subsp. fastidiosa GB514] Length = 361 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 40/281 (14%), Positives = 102/281 (36%), Gaps = 17/281 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L +SF+ + + ++ + ++ + ++ +LL G + Sbjct: 1 MPKLDRYLLSDFTQSFIATLIVLMLVGVGGVLVDILGSIADGHFPAKLLLSQLGLRFISY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP++ P + L + R++E+ +I + G ++ +L L + + + + + Sbjct: 61 LPLLLPLALMLGLLMSLGRLYRDSEMAVITSIGVGPGRMLPSILGLVLPVVVLIGVCSLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSR 179 + P T L +A ++ + LE F + D + +S + + T L +F+ + Sbjct: 121 LAPWANRTANDLLEQANRSIIMAGLEAGTFTPMPDGGVVYLSSLSSDGTKLNAVFMQSQK 180 Query: 180 DTQTHKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISK--DISIMKFKSYTLQTESAN 234 D + A+ G + + + L DG+ + ++ F + Sbjct: 181 D-DRIAVVTAKRGEMYVQGDKGRYLRLEDGQRVDGPADGAALNYRVLTFARNDALLPELS 239 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKR 275 + L+ + +++ H R Sbjct: 240 VVYDSNHPDILPTFNLI----------GDPRREAQAQLHAR 270 >gi|332885188|gb|EGK05439.1| hypothetical protein HMPREF9456_02640 [Dysgonomonas mossii DSM 22836] Length = 365 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 56/362 (15%), Positives = 128/362 (35%), Gaps = 21/362 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 + + YI++ +++ S + I+ I+ V I +R++ S+ L I+ +P Sbjct: 4 LSILDKYIIKKFLGTYIFSIILIISISVVFDINERLDKFLSNNAPLKAIVFDYYMNFVPY 63 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + + + + + N+E++ + + G S L+KP + A ++++ FI + Sbjct: 64 YTNLFSALFVFIAVIFFTSKLADNSEIIAMLSNGMSFKRLMKPYMISAGIIAVGSFILSS 123 Query: 120 IIEPKCRSTIKQLSAKAQLALT---FSYLEENLFFRLDDDLYIKISKYNPNNTL-QGIFI 175 I P T + K + S ++ ++D + + I +++ L + + Sbjct: 124 FIIPPANETRIKFQNKYIKDKSVDYASRIQ----MQVDKGVILYIERFDNKTRLGYNLSL 179 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + A D +LN+ + + + I+ TL ++ Sbjct: 180 DKFEGKELKSRLVASRIEYD-TAYHWVLNNYSIREFHGMKEKITTGTRIDTTLNVIPSDF 238 Query: 236 STIVLKANDQNLSFLL-----NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 V + L N + + EFHKR I +I Sbjct: 239 LVSVNDFEQMSTPKLYSYIQRQKEKGLANVGGVSITQFEIEFHKRFASVFSAFILTIIG- 297 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 R+ K + I + + V + F + + P+L +++ I + Sbjct: 298 ----ASLSARKMKGGMGLNIGIGLGLSVTYIMFQTVSSSFAVSGTMPPMLAVWIPNIVFM 353 Query: 350 FL 351 F+ Sbjct: 354 FI 355 >gi|308189158|ref|YP_003933289.1| Inner membrane protein yjgQ [Pantoea vagans C9-1] gi|308059668|gb|ADO11840.1| Inner membrane protein yjgQ [Pantoea vagans C9-1] Length = 358 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 49/359 (13%), Positives = 127/359 (35%), Gaps = 5/359 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + YI + I + +++ +V ++ +I+ + ++ + S + +P + Sbjct: 3 RVLDRYIGKTIFNTIMLTLFMLVSLSGIIKFVDQLRKTGQGSYSALSAGYYTLLSVPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ + +EL+++ G +R+ + V+ AI L + + Sbjct: 63 EIFFPMAALLGALLGLGALAQRSELVVMQAAGFTRMQVALSVMKTAIPLVLLTMAIGEFV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + A+ + L+ + ++ +I I + +N + G+ I + D Sbjct: 123 APSGEQMARNYRAQQLYGGALVSTQNGLWAKDGNN-FIYIERIKGDNEIDGVSIYNFNDQ 181 Query: 182 QT-HKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + YA + + D ++ +L+ E + P S + + Sbjct: 182 RRLQSVRYAATATWDAAKKRWMLSQVDESNLTDPKLITGSQSLSGEWKTNLTPDKLGVVA 241 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L + ++ L + + Y+ ++ Q L + L+++ Sbjct: 242 LDPDALSIRGL-HSYSKYLKQSGQEAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRS 300 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 IS F V + + P + + L F +I + M+ K+ Sbjct: 301 VSMGVRVVTGISFGFLFYVLDQIFGPLSLVYGLPPILGAI-LPSFAFFAISMFMLIKRR 358 >gi|119476402|ref|ZP_01616753.1| hypothetical protein GP2143_08124 [marine gamma proteobacterium HTCC2143] gi|119450266|gb|EAW31501.1| hypothetical protein GP2143_08124 [marine gamma proteobacterium HTCC2143] Length = 353 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 58/366 (15%), Positives = 122/366 (33%), Gaps = 23/366 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI I S L+ ++ + + I+ + + S L+ Y +P Sbjct: 1 MNKLGRYISTTITASTLLVLFMLLGLDAIAAIVDEMGYL-SGNYDFVAALRFVIYSVPAT 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + PF + L ++ +EL+++ + G S + ++ V+ I++ I + Sbjct: 60 MFDLLPFAALVGCLAGLGTLASGSELVVMRSAGVSTLRIVWMVMRPIIVVMIAGMLVSEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P S K A A E L+ + + ++ + PN L G+ + + Sbjct: 120 VAPVTESIAKSERAIALKKSQNIVSREGLW-HREANRFMHFNAVQPNGILYGVTMYQFDE 178 Query: 181 TQTH-KIYYAQSGSIDLDRQAIILND-------GEVHRKSPISKDISIMKFKSYTLQTES 232 YAQ +L D RK + L Sbjct: 179 QHKPQSTLYAQRAIYQSGE--WLLEDVVESIITDTRVRKIASPSKPWSTELSPELLNILM 236 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWL--FPVIFGLISI 290 + + + NDQ ++L N+ YR F K++ Q L ++ IS Sbjct: 237 LDPIDLSIAGNDQYANYLQAQGLNS--------SPYRLAFWKKILQPLSTLALVLLAISF 288 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 + R + + + + + + Q P Y ++ + + + ++ Sbjct: 289 IFGPLREVTMGYRIFIGVLVGIVFRTAQDILAPASLVYGFQ-PIYASLIPIVICAVLGLW 347 Query: 351 LLMIKK 356 L + Sbjct: 348 FLRRAR 353 >gi|283786944|ref|YP_003366809.1| permease [Citrobacter rodentium ICC168] gi|282950398|emb|CBG90046.1| putative permease [Citrobacter rodentium ICC168] Length = 360 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 57/363 (15%), Positives = 127/363 (34%), Gaps = 15/363 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + + I++ ++ + + + L + +P Sbjct: 5 GVLDRYIGKTI---FTTIMMTLFMLVSLSGIIKFVDQLKKAGQGNYDALGAGMYTLLSVP 61 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L + + +EL+++ +G +R+ + V+ AI L + Sbjct: 62 KDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIG 121 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-- 176 + P+ + A+A + ++ L+ + D + ++ I + + L GI I Sbjct: 122 EWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAK-DGNSFVYIERVKGDEELGGISIYAF 180 Query: 177 -DSRDTQTHKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESAN 234 D R + + YA S D +++ L+ E + P S ++ Sbjct: 181 NDQR--RLQSVRYAASAKFDPEQKVWRLSQVDESSLQDPKQITGSQTVSGTWKTNLTPDK 238 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + L + ++S L N + Y+ ++ Q L + L+++ Sbjct: 239 LGVVALDPDALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIF 297 Query: 295 KRALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 IS F V F + P +L F S++L+M Sbjct: 298 GPLRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPVIGALLPSASFFFISLWLMM 357 Query: 354 IKK 356 K Sbjct: 358 RKS 360 >gi|153951328|ref|YP_001398257.1| hypothetical protein JJD26997_1188 [Campylobacter jejuni subsp. doylei 269.97] gi|152938774|gb|ABS43515.1| putative membrane protein [Campylobacter jejuni subsp. doylei 269.97] Length = 341 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 65/327 (19%), Positives = 122/327 (37%), Gaps = 20/327 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+L + L + I ++ +Q L SS S LLK+ G+++P + Sbjct: 1 MKLSLRYVLNQFLSTNLSIFFVLFAIVSMVFFIQLAKLTSSIEISFLDLLKLYGFMLPRI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P F + T L +++ E +++ G S + L K L +A L+S F+ + + Sbjct: 61 LIFTLPISFFISLTLALFRLSKENESIVLFTLGFSPMILAKFFLKIASLISAFMLVVALV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV--DS 178 + P ++ + + F + D I I K + + + I + Sbjct: 121 MTPIVF-ELQDNFVNYKSTQVKFNYKTGEFGQKFLDWMIFIEKQDSDKH-ENIIMYRPKH 178 Query: 179 RDTQTHKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + ++ A+ + D A LN G+++ S +F + + T+ + Sbjct: 179 KAGDKEQLIIAKEAHVQRKDDSFAFSLNQGKMYNFEQGQSIFS-GEFDTLVVNTQFNTDN 237 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 K + LN NP EF +T LFP+ L ++ Sbjct: 238 LQTKKFYEY--WNDLNENPQRAR-----------EFVIYITIALFPLASTLFALCFGLVT 284 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFS 323 + +F ++I FG+ FS Sbjct: 285 YRYEKGYVYLGMFGVIAIYFGLLSSFS 311 >gi|260592209|ref|ZP_05857667.1| putative membrane protein [Prevotella veroralis F0319] gi|260535843|gb|EEX18460.1| putative membrane protein [Prevotella veroralis F0319] Length = 405 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 52/361 (14%), Positives = 126/361 (34%), Gaps = 16/361 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 + + YI++ +++ + L I+ IA V + ++ + I+ IP Sbjct: 45 LGILDWYIIKKFIGTYIYAILLIISIAIVFDFNENLSKFTQYHAPWRAIIFDYYANFIPY 104 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + G S L++P + ++++ F + Sbjct: 105 YSNLFSPLFVFIAVIFFTSKLAGNSEIIAMLAAGVSIKRLMRPYMLSCVVIAGLTFYLNS 164 Query: 120 IIEPKC---RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFI 175 + P R + L ++ + ++ LF + + I Y+ G + Sbjct: 165 FVIPHGTVIRQNFETLYRNSKKNTSAENVQ--LF--VAKNTTAYIQNYDDQYKRGYGFSL 220 Query: 176 VDSRDTQTHKIYYAQS---GSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 V ++ + A +I + L++ ++ + + I K L E Sbjct: 221 VKIKNKKIVSHLTAMEIQYDTIADSKYHWKLSNWKIRTLKGLKEHIQSGTTKDTVLLMEP 280 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + + LL+ + + Y EFHKR+ I +I + Sbjct: 281 TDLVYSKGQQETFTSPELLDYISKQTSRGSGNVVQYEVEFHKRIAMSFSSFILTIIGLAL 340 Query: 293 ADKRALVRQRKKIHPIFISLSISFG-VFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + ++ R+ + I L++SF + I+ N + ++ + I Sbjct: 341 SSRK---RKGGMGLSLGIGLALSFSYIMLQTVSATFAIQDNTPPVLAAWIPNIIFAIIAY 397 Query: 352 L 352 Sbjct: 398 F 398 >gi|224586303|ref|YP_002640102.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224470831|gb|ACN48661.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 360 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 52/361 (14%), Positives = 124/361 (34%), Gaps = 10/361 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + + I++ ++ + + + L + +P Sbjct: 5 GVLDRYIGKTI---FTTIMMTLFMLVSLSGIIKFVDQLKKAGQGNYDALGAGMYTLLSVP 61 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L + + +EL+++ +G +R+ + V+ AI L + Sbjct: 62 KDIQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIG 121 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 + P+ + A+A + ++ L+ + ++ ++ I + + L GI I Sbjct: 122 EWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNN-FVYIERVKGDEELAGISIYVF 180 Query: 179 RDTQT-HKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSS 236 D + + YA S D + + L+ E ++P S ++ Sbjct: 181 NDQRRLQSVRYAASAKFDPEHKVWRLSQVDESDLQNPKQITGSQTVSGTWKTNLTPDKLG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L ++ ++S L N + Y+ ++ Q L + L+++ Sbjct: 241 VVALDSDALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 IS F V + + P + L LM++K Sbjct: 300 LRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIVGALLPSASFFLISLWLMLRK 359 Query: 357 K 357 Sbjct: 360 S 360 >gi|134095576|ref|YP_001100651.1| hypothetical protein HEAR2399 [Herminiimonas arsenicoxydans] gi|133739479|emb|CAL62530.1| putative permease [Herminiimonas arsenicoxydans] Length = 382 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 61/390 (15%), Positives = 125/390 (32%), Gaps = 40/390 (10%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y IGRS + + + + ++ + V + L +P Sbjct: 1 MKILQKYFAAEIGRSVIFVLIAFLALFGFFDLIAELKAVGHGGYKIQHALLFVLLSMPGY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + T L+ +E I+ + S ++ + ++ +I F+ Sbjct: 61 LYELMPIAALIGTIWTLSQFAARSEFTIMRASSMSTGMAGLMLIKIGLVFAIVTFVVGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFR-----------LDDDLYIKISKYNPNNT 169 + P + +++ Q L+ + ++ + P+ Sbjct: 121 VVPASSNMAEKIRTLNQGGSLSQEFRSGLWTKDMIRSNGKDGEAIGSRFLNVRTVQPDGQ 180 Query: 170 LQGIFIVD-SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRK-----------SPISKD 217 L + I + +R+ + A D +L++G + I+ Sbjct: 181 LTDLKIYEFNRNFHLTALITAARADYQGD-NVWLLSNGSQAEFGETELMGAAVATDITTA 239 Query: 218 ISIMKFKSYTLQTESANS--STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKR 275 IS F S L +E S + L+N Y L E R Sbjct: 240 ISTRNFASKPLISEVTPEILSVGFSDPAKMSAYDLVN-------YTQYLAENNRETARYE 292 Query: 276 LTQW---LFPV-IFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ 331 + W ++P +F ++++ R IF + I S H Sbjct: 293 IALWKKVVYPFAVFVMMALALPFAYLHFRSGGVSLKIFTGIMIGVSFQLINSLFSHLGLL 352 Query: 332 N---PYYIPILYLFLFCISSIFLLMIKKKY 358 N P+ IL LF +++I L+ +++ Sbjct: 353 NTWPPFATAILPSLLFLLAAIGALLWVERH 382 >gi|254786689|ref|YP_003074118.1| SecD export membrane protein [Teredinibacter turnerae T7901] gi|237687240|gb|ACR14504.1| SecD export membrane protein [Teredinibacter turnerae T7901] Length = 354 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 64/362 (17%), Positives = 125/362 (34%), Gaps = 15/362 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + YI + S + L IV + + ++ +++ + + L IP+ Sbjct: 1 MRKLQRYIAAQVWGSVMGVLLVIVSLDAIADLVDQLSQLKGD-YTFLEALFYVVLYIPSS 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L + ++EL+++ G S LI V+ +L I + Sbjct: 60 VCDYLPLAALVGCLIGLGLLANSSELVVMRAAGVSVRQLIWSVMRPVLLFIIVGALVGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P Q E L+FR + Y+ + PN L GI D Sbjct: 120 VSPYTDQYADSRRDLLQGHERALQSERGLWFREGSE-YMHFNAVLPNGRLYGITRYKFAD 178 Query: 181 TQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKS---YTLQTESANSS 236 + + +S D + GE+ + K +F S YT + + + Sbjct: 179 GGRLEQASFIRSAIYQGDH--WVEQGGEITQFDAEDKVDRE-EFISRNWYT-EISPSLLN 234 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 +VL ++ + L N + YR F ++ Q L + +I+I Sbjct: 235 VLVLDPDELPMQRLYA-YANYQEKQNIDSSEYRLAFWQKALQPLATLSLVMIAISFIFGP 293 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY-LFLFCISSIFLLMIK 355 +RQ +FI + + VF + + + P+ L F ++ Sbjct: 294 --LRQTTMGFRVFIGVIVGL-VFQTSQKLFGPMSIIMGFSPMFAVLIPIAFCFAFGWLLI 350 Query: 356 KK 357 K+ Sbjct: 351 KR 352 >gi|153806356|ref|ZP_01959024.1| hypothetical protein BACCAC_00617 [Bacteroides caccae ATCC 43185] gi|149131033|gb|EDM22239.1| hypothetical protein BACCAC_00617 [Bacteroides caccae ATCC 43185] Length = 365 Score = 97.0 bits (240), Expect = 5e-18, Method: Composition-based stats. Identities = 55/364 (15%), Positives = 131/364 (35%), Gaps = 16/364 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 +K + YI++ +++ + I+ IA V ++++ + + I+ + IP Sbjct: 7 IKRLDWYIIKKFLGTYVFAIALIISIAVVFDFNEKMDKLMEHEAPWSKIIFEYYMNFIPY 66 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + +TG S +++P + A ++++ F+ + Sbjct: 67 FSNLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMMRPYMISAAIIALTTFMLSS 126 Query: 120 IIEPKC---RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + PK R + K + T ++ +D + I YN F + Sbjct: 127 YVIPKGSVTRLNFEDRYIKPKKQNTARNVQ----LEVDSGVIAYIDNYNNAMKTGNRFSL 182 Query: 177 DS-RDTQTHKIYYAQSGSIDLDRQA-IILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 D D + A+ + D ++D V + + I+ + E ++ Sbjct: 183 DKFVDKKLVSHLTARRITYDTATVHKWTIHDYMVRELDGLKEKITKGDKIDSIINMEPSD 242 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + + L + ++ + E+HKR+ I +I + Sbjct: 243 FLIMKNQQEMLTSPQLSDYIEKQKRRGFANIKEFEIEYHKRIAMSFASFILTIIGVS-LS 301 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--FCISSIFLL 352 R I + LS S + F I N P++ +++ + I Sbjct: 302 SRKTKGGMGLHLGIGLGLSFS---YILFQTITSTFAINGNVPPVIAVWIPNILYAGIAFF 358 Query: 353 MIKK 356 + +K Sbjct: 359 LYQK 362 >gi|315452594|ref|YP_004072864.1| Integral membrane protein [Helicobacter felis ATCC 49179] gi|315131646|emb|CBY82274.1| Integral membrane protein [Helicobacter felis ATCC 49179] Length = 348 Score = 97.0 bits (240), Expect = 5e-18, Method: Composition-based stats. Identities = 57/330 (17%), Positives = 125/330 (37%), Gaps = 14/330 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + Y+L G+ F + + FIA ++ ++ + S LL++ YL+P Sbjct: 1 MQIAKNYMLNAAGQVFFSFFIVLFFIASIVMLISIATVTLVVKLSALDLLQLYFYLLPGT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P F L ++ + ELL+ + G + +++ L L +++S L + I Sbjct: 61 LFFIIPITFFGACVIGLARLSYDHELLVFFSLGIAPRQIVRAFLPLCLVVSALLLVFSLI 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +S + + + ++ F + D + + K + N + + Sbjct: 121 LVPASKSAYYSFLRDKKERVDVN-IQAGEFGQKLGDWLVYVGK-SQNGVFGDLVLFSHSG 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 T A+ G I L + + + FK L+ + A S Sbjct: 179 LSTESFIIAKEGRIRNQNGLFELELDHGNAYFAAKGQVRKVHFKELILKNKPALSE---- 234 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHK--RLTQWLFPVIFGLISIVAADKRAL 298 ++ ++L + Y + H+ R TQ + +F L S+ + Sbjct: 235 ---RKDAAYLYGHDF--IGYWGKAFGA-HPNAHQQRRFTQAILVALFPLASLFCIPLFGI 288 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHK 328 R + ++ + I+ G+++ +II + Sbjct: 289 ANPRYAKNLSYVYVLITTGIYFLLMHIISQ 318 >gi|183600431|ref|ZP_02961924.1| hypothetical protein PROSTU_04002 [Providencia stuartii ATCC 25827] gi|188020227|gb|EDU58267.1| hypothetical protein PROSTU_04002 [Providencia stuartii ATCC 25827] Length = 358 Score = 96.6 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 54/359 (15%), Positives = 127/359 (35%), Gaps = 6/359 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI R I S LM+ +V ++ +I+ ++++ V + + IP + Sbjct: 3 GVLDRYIGRTILNSILMTLFMLVSLSGIIKFVEQLRKVGDGEYTTLGAGVFTLLTIPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ +EL+++ +G +R+ + V+ AI L I + + Sbjct: 63 DIFFPMAALLGALLGLGALASRSELVVMQASGFTRLQIALSVMKTAIPLVIVAMLIGEWV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-DSRD 180 P + A+ + + +E ++ + D +I I + + ++Q + I + Sbjct: 123 APSADQWARNYRAEKIVGNSLVVTDEGMWAKDGPD-FIHIQRVSDTTSIQEVSIYRFNEQ 181 Query: 181 TQTHKIYYAQSGSIDLDRQAIIL--NDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + +A SG+ D D Q +L D + + ++ + + Sbjct: 182 HKLTSVMFASSGAYDKDNQLWVLSQVDESILSSEKKITGSQRLTYE-WKTNLTPEKLGIV 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 L A+ ++ L ++ Y K++ L + +++ Sbjct: 241 SLSADSLSIRGLY-QYIAYLKESGQVAAVYELSMWKKILAPLSAAVMMFMAVSFIFGPLR 299 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I F V + P I L + + +L++K+K Sbjct: 300 TVPMGVRVVSGIVGGFLFYVLNEGFGKWSLVYSIPPIIAALLPSVLFLGVSIVLLVKRK 358 >gi|197121804|ref|YP_002133755.1| permease YjgP/YjgQ family protein [Anaeromyxobacter sp. K] gi|196171653|gb|ACG72626.1| permease YjgP/YjgQ family protein [Anaeromyxobacter sp. K] Length = 360 Score = 96.6 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 50/347 (14%), Positives = 118/347 (34%), Gaps = 13/347 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + +FL++ +V I + + + + + L +L++ Y V+ Sbjct: 2 ILFRYVARRMLGAFLVALAGVVGIYLAVDFVDNASAYTGAGW-LPAVLQLYAYKAAGVVY 60 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 MV P + + + E + G L PVL + +L L + + + Sbjct: 61 MVAPAALILGAGIATSMFRQTREYTAMRAVGLGPWRLAVPVLAVTLLAGGVLVVLNDAVG 120 Query: 123 PKCRSTIKQLSA--KAQLALTFSYL---EENLFFRLDDDLYIK-ISKYNPNNTLQGIFIV 176 + ++++A A+ +L E +FR D + + P+ + + + Sbjct: 121 VQAAERAEEITAHRFARGGNLRRFLAAREPKRWFRGMDGKRVYHLRGNLPDGGFERVTVY 180 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-DISIMKFKSYTLQTESANS 235 + + + + D +A IL D E P + + Y Sbjct: 181 ELAE-GFTLARRIDAARMHPDGRAWILEDVEDRTFRPDGSMALERADRRRYAFDEPPDAF 239 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + I K + + L+ + + ++ E + RL L + + A Sbjct: 240 AVIAGKPDQMRWNTLIRQ-IGIRKRLGQPVTEFQLERYDRLAYPLAGI--PGALLALALA 296 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 R+ + ++ ++ +FWG + + + P + + Sbjct: 297 LRRDRKGHLAAALLEAVGVTL-LFWGMQGVSSALGLSGRVAPWIASW 342 >gi|326316898|ref|YP_004234570.1| permease YjgP/YjgQ family protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373734|gb|ADX46003.1| permease YjgP/YjgQ family protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 365 Score = 96.6 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 54/372 (14%), Positives = 130/372 (34%), Gaps = 22/372 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPT 59 MK+ I R + L + + + ++ + V ++ L IP+ Sbjct: 1 MKTIRGLIYREALAAVGFVTLGFLALFFFFDMVDELRYVGRVQAYQMSHALLYVSLGIPS 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 L + P + T V+ +++E I+ +G ++ +L L + + F + Sbjct: 61 HLYELLPITVLIGTIFVMARFAQSSEFTIMRTSGLGPWRALRTLLVLGLGFVMLTFTVGD 120 Query: 120 IIEPKCRSTIK----QLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI 175 + P + + + T ++L+E + D + + + + + + I Sbjct: 121 YLAPATDRLAQLVRARYLGQITTGATGAWLKE---RQGDRSVAVNVRALRHDGGMSNVRI 177 Query: 176 VD-SRDTQTHKIYYAQSGSIDLDRQAIILNDGEV---HRKSPISKDISIMKFKSYTLQTE 231 + D + A +G D A L+D + HR+ + ++ + T Sbjct: 178 FEFDGDGRLASTLQAAAGEFGTD--AWELSDVKRSVFHRRGEAEAHVERLQESRFRWPTH 235 Query: 232 -SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 SA+ L D+ + L + + + Y EF +++ L ++ ++S+ Sbjct: 236 ISADMVAASLLKPDRMATIDLFQYIRHLESNGQAAQKYEIEFWRKVFYPLSCLVMVVLSL 295 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCIS 347 A R +F + F F Y + +P+ ++ + Sbjct: 296 PFA--YLHFRSGGIAGYVFGGVMAGISFFLLNNVFGYAGNLQNWSPWLTAAAPGIIYSLL 353 Query: 348 SI--FLLMIKKK 357 S+ F ++ ++ Sbjct: 354 SLGAFGWLVLRR 365 >gi|225011756|ref|ZP_03702194.1| permease YjgP/YjgQ family protein [Flavobacteria bacterium MS024-2A] gi|225004259|gb|EEG42231.1| permease YjgP/YjgQ family protein [Flavobacteria bacterium MS024-2A] Length = 463 Score = 96.6 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 39/243 (16%), Positives = 99/243 (40%), Gaps = 15/243 (6%) Query: 24 VFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRN 83 +FI + I+ ++ + I+ K Y P ++P+V P + + +++ N Sbjct: 1 MFIFIIQTFWLFIDELAGKGLDIIIISKFLLYYSPKLIPLVLPLSVLLASLMTYGTLSEN 60 Query: 84 TELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFS 143 E + +TG S + + +LL I F N + P L Sbjct: 61 YEFAAMKSTGISLQRALLALTIFHVLLGIGTFYFSNHVIPYGELKSYNLRRNLAKLEPTL 120 Query: 144 YLEENLFFRLDDDLYIKISKYNPNNT--LQGIFIVD-SRDTQTHKIYYAQSGSIDLDRQ- 199 + E +F + + + IK+++ +N L+ + I + + +++ + + A+ G + + Sbjct: 121 AIREGIFNEIGE-INIKVARKYGDNDRFLEDVIIHEYTPNSENNIVIKAERGEMKSETTD 179 Query: 200 ---AIILNDGEVHR-----KSPISKDI--SIMKFKSYTLQTESANSSTIVLKANDQNLSF 249 ++L +G + K+ + I + + F+ Y + + + + + L+ + +F Sbjct: 180 PNLKLVLYNGNRYEEVIPKKATDKERIPHAKVYFEEYEMNIDLSKFNNVDLEEENYKSTF 239 Query: 250 LLN 252 + Sbjct: 240 RMQ 242 >gi|149279360|ref|ZP_01885491.1| hypothetical protein PBAL39_13617 [Pedobacter sp. BAL39] gi|149229886|gb|EDM35274.1| hypothetical protein PBAL39_13617 [Pedobacter sp. BAL39] Length = 367 Score = 96.6 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 57/365 (15%), Positives = 128/365 (35%), Gaps = 10/365 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGY-LIPT 59 +K + YI+ +FL + V I + + ++++ S+ + ++ + IP Sbjct: 8 IKIIDWYIISKYLGTFLYTLTLFVVIIVIFDLSEKLDDFLSNNLTFWQVVSLYYAGSIPF 67 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + M++P + M TE++ I + G S + P A ++ + Sbjct: 68 YVNMLSPLINFIAVIFFTAKMADQTEIVPILSGGVSFNRFLLPYFISASIIFAANLGANL 127 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P T+K + + ++ +LD YI + ++ N F +D+ Sbjct: 128 YVLPYTN-TLKNTFENTYVKKNDPSSKSDIHMKLDARTYIYMRSFDNKNKTGAQFSLDNF 186 Query: 180 DTQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + A D +++ L + + + + ++ K+ + Sbjct: 187 NGDEMTRKIVADEIKWDSLKRSWKLTNYSIRDIKGLKETMTNGAGKTKDTILDMRPDDFS 246 Query: 239 VLKANDQNLS--FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 +NLS L + ++ E +KR L + LI + + ++ Sbjct: 247 AYDNIFENLSNQELSDKIKKEKIRGSGIMNDLLFERYKRYLHPLSAYVLTLIGVALSSRK 306 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY-LFLFCISSIFLLMIK 355 + P+ I + +SF + F+ + P+L L I I + Sbjct: 307 V---RGGVGLPLGIGILLSF-TYIVFNQFAKMFSLKGEFPPLLAVLMPTIIFGILGFYLL 362 Query: 356 KKYTK 360 KK K Sbjct: 363 KKAPK 367 >gi|317477038|ref|ZP_07936280.1| hypothetical protein HMPREF1016_03264 [Bacteroides eggerthii 1_2_48FAA] gi|316906831|gb|EFV28543.1| hypothetical protein HMPREF1016_03264 [Bacteroides eggerthii 1_2_48FAA] Length = 393 Score = 96.6 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 55/369 (14%), Positives = 132/369 (35%), Gaps = 19/369 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 +K + YI++ +++ + I+ IA V ++++ S I+ IP Sbjct: 35 LKRLDWYIIKKFLGTYVFAIALIISIAVVFDFNEKMDRFMSHEAPWEAIIFDYYMNFIPY 94 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + +TG S +++P + A ++++ F + Sbjct: 95 FANLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMLRPYMVSAAIIAVTTFCLGS 154 Query: 120 IIEPKC---RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + PK R + K + + T ++ +D + I ++ + F + Sbjct: 155 YVIPKGSVTRLNFEDKYYKPRKSTTARNIQ----LEVDSGVIAYIERFEDYSKTGYRFSL 210 Query: 177 DS-RDTQTHKIYYAQSGSIDLDRQA-IILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 D +D Q A+S + D + D + + + SI+K + Sbjct: 211 DKFKDKQLVSHLTARSITYDTATVHKWTVKDYMIREMDGMRE--SIVKGEKMDTILFMEP 268 Query: 235 SSTIVLKANDQNLS--FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + +++K + L+ L ++ + E+HKR+ I LI + Sbjct: 269 ADFLIMKNQQEMLTSPQLSEYINRQRQRGFANIKEFEIEYHKRIAMSFASFILTLIGVSL 328 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF-LFCISSIFL 351 + + + + + F I N P + ++ + + Sbjct: 329 ----SSKKTKGGMGLHLGIGLGLSFSYILFQTIASTFAVNGNVPPFIAVWIPNLLYAFIA 384 Query: 352 LMIKKKYTK 360 + KK K Sbjct: 385 FYLYKKAPK 393 >gi|154707760|ref|YP_001424260.1| hypothetical membrane spanning protein [Coxiella burnetii Dugway 5J108-111] gi|154357046|gb|ABS78508.1| hypothetical membrane spanning protein [Coxiella burnetii Dugway 5J108-111] Length = 355 Score = 96.6 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 56/364 (15%), Positives = 124/364 (34%), Gaps = 16/364 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI I + + L ++ I ++ + +++ + L +P+ Sbjct: 1 MPLLNRYIRNAIITATALVMLVLLGIEMFMEFIGQLSQIGLVHYGLGQAFLYVLTQLPSD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L + ++EL+++ G S + V+ A+L+ + + + Sbjct: 61 LYQLFPMAGFLGCLIGLGRLASSSELMVMRTAGVSIAGVTWAVVKAALLMMVAMTFIGEV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI---FIVD 177 I P+ ++ ++ A +++ +I I + N + + FI Sbjct: 121 IAPQIEASGEETKLTALSKAVGYKALGDVWLHGAQ-SFIHIGSVDAKNKISEVSQFFI-- 177 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI-SKDISIMKFKSYTLQTESANSS 236 + Q YA G IL + + + +P + + I KF T+ + Sbjct: 178 NNKHQLLSAVYAPKGEYVKGH--WILYNVKQTQFTPNRTTEKKIAKFP-LTIVFNPDHLQ 234 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + Q++ L + Y F +R Q L V+ + + Sbjct: 235 QGRKMVDRQSIVGLYH-TIRYRQQAGLQTSRYVFAFWQRFIQPLTTVVMICLGVPFIFG- 292 Query: 297 ALVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 +RQ I + I F + F + P + ++ LF + + LL Sbjct: 293 -SLRQASMGLRILTGIVIGFAFYMLNQFFGPFAMVYQIPPIFAALMPTVLFAVGCVILLR 351 Query: 354 IKKK 357 ++ Sbjct: 352 YSRR 355 >gi|205356326|ref|ZP_03223091.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni CG8421] gi|205345711|gb|EDZ32349.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni CG8421] Length = 341 Score = 96.6 bits (239), Expect = 6e-18, Method: Composition-based stats. Identities = 65/327 (19%), Positives = 122/327 (37%), Gaps = 20/327 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+L + L + I ++ +Q L SS S LLK+ G+++P + Sbjct: 1 MKLSLRYVLNQFLSTNLSIFFVLFAIVSMVFFIQLAKLTSSIEISFLDLLKLYGFMLPRI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P F + T L +++ E +++ G S + L K L +A L+S F+ + + Sbjct: 61 LIFTLPISFFISLTLALFRLSKENESIVLFTLGFSPMILAKFFLKIASLISAFMLVVALV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV--DS 178 + P ++ + + F + D I I K + + + I + Sbjct: 121 MIPIVF-ELQDNFVNYKSTQVKFNYKTGEFGQKFLDWMIFIEKQDSD-KYENIIMYRPKH 178 Query: 179 RDTQTHKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + ++ A+ + D A LN G+++ S +F + + T+ + Sbjct: 179 KADDKEQLIIAKEAHVQRKDDSFAFSLNQGKMYNFEQGQSIFS-GEFDTLVVNTQFNTDN 237 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 K + LN NP EF +T LFP+ L ++ Sbjct: 238 LQTKKFYEY--WNDLNENPQRAR-----------EFVIYITIALFPLASTLFALCFGLVT 284 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFS 323 + +F ++I FG+ FS Sbjct: 285 YRYEKGYVYLGMFGVIAIYFGLLSSFS 311 >gi|120611823|ref|YP_971501.1| permease [Acidovorax citrulli AAC00-1] gi|120590287|gb|ABM33727.1| permease YjgP/YjgQ family protein [Acidovorax citrulli AAC00-1] Length = 365 Score = 96.6 bits (239), Expect = 6e-18, Method: Composition-based stats. Identities = 53/374 (14%), Positives = 130/374 (34%), Gaps = 26/374 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPT 59 MK+ I R + L + + + ++ + V ++ L IP+ Sbjct: 1 MKTIRWLIYREALAAVGFVTLGFLALFFFFDMVDELRYVGRVQGYQMSHALLYVSLGIPS 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 L + P + T V+ +++E I+ +G + ++ +L L + + F + Sbjct: 61 HLYELLPITVLIGTIFVMARFAQSSEFTIMRTSGLGPWSALRTLLVLGLGFVMLTFTVGD 120 Query: 120 IIEPKCRSTIK----QLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI 175 + P + + + T ++L+E + D + + + + + + I Sbjct: 121 YLAPATDRLAQLVRARYLGQITTGATGAWLKE---RQGDRSVAVNVRALRHDGGMSNVRI 177 Query: 176 VD-SRDTQTHKIYYAQSGSIDLDRQAIILNDGEV---HRKSPIS---KDISIMKFKSYTL 228 + D + A +G D A L D + HR+ + + F + Sbjct: 178 FEFDGDGRLASTVQAAAGEFGAD--AWELRDVKRSVFHRRGEAEAHVERLQEASF-RWPT 234 Query: 229 QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 S + +LK D+ + L + + + Y EF +++ + ++ ++ Sbjct: 235 HISSDMVAASLLKP-DRMATIDLFQYIRHLESNGQAAQKYEIEFWRKVFYPMSCLVMVVL 293 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFC 345 S+ A R +F + F F Y + +P+ ++ Sbjct: 294 SLPFA--YLHFRSGGIAGYVFGGVMAGISFFLLNNVFGYAGNLQNWSPWLTAAAPGIIYS 351 Query: 346 ISSI--FLLMIKKK 357 + S+ F ++ ++ Sbjct: 352 LLSLGAFGWLVLRR 365 >gi|328949932|ref|YP_004367267.1| permease YjgP/YjgQ family protein [Marinithermus hydrothermalis DSM 14884] gi|328450256|gb|AEB11157.1| permease YjgP/YjgQ family protein [Marinithermus hydrothermalis DSM 14884] Length = 335 Score = 96.6 bits (239), Expect = 6e-18, Method: Composition-based stats. Identities = 52/357 (14%), Positives = 115/357 (32%), Gaps = 29/357 (8%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 Y+LR + +L+ L + + + + L +L+I Y +P L + Sbjct: 2 LGRYLLREVLPPYLLGTLLFIALITTDLLASLSGVFLRQGTPLVEVLQIVLYRMPFTLGI 61 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P L R++EL + +G S + L+ +L L+ +++ + + ++P Sbjct: 62 ALPLGLVFAILIGLARWVRDSELKAMYASGVSPLRLLPVLLGLSAVVAGGVLFNAAWLKP 121 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN----NTLQGIFIVDSR 179 + + +QL + S + N + + ++ P+ L+ + +V+ Sbjct: 122 EAHARYEQLLYRVYYGTVPSGVLSNQAYAPEGLGVYFAARIYPDGQGGGRLENVRVVEPS 181 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 ++ A G R +L D +R +P ++ +S A Sbjct: 182 GA----LWSAARGVWQDAR--WVLED--AYRINPDG----TVETRSRVPLPFPAQFVPPT 229 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L L +P R L Y FG+I++ + Sbjct: 230 TSYEALPLGELRELARVDPEARFPLQRRYAD-------------AFGVIALAWLAGVVGL 276 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R+ + + FG F ++ +L + ++ Sbjct: 277 GLREAAWAFVAVVLLIFGYFVLWTLAAQLARFALVGAYGAWLPNAVYFLLAAWGTRR 333 >gi|255531333|ref|YP_003091705.1| permease YjgP/YjgQ family protein [Pedobacter heparinus DSM 2366] gi|255344317|gb|ACU03643.1| permease YjgP/YjgQ family protein [Pedobacter heparinus DSM 2366] Length = 367 Score = 96.6 bits (239), Expect = 6e-18, Method: Composition-based stats. Identities = 64/363 (17%), Positives = 127/363 (34%), Gaps = 14/363 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGY-LIPTV 60 K + YI+ +FL + V I + + ++++ S+ + ++ + IP Sbjct: 9 KILDWYIISKYLGTFLYTLTLFVVIIIIFDLSEKLDDFLSANLTFWQVISLYYAGSIPYY 68 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M++P + M TE++ I + G S + P A ++ S Sbjct: 69 VNMLSPLINFIAVIFFTAKMADQTEIVPILSGGVSFNRFLLPYFVSAFVIFAVNLASNLY 128 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P +K + + N+ +LDD+ YI + ++ + F +D+ Sbjct: 129 ILPYTN-QLKNTFENTYVKKNDPSSKSNIHMKLDDNTYIFMDNFDNKSKTGTKFSLDNFK 187 Query: 181 TQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 K A D +++ L + + + + + + S T T + Sbjct: 188 GDVLTKKLIADEIKWDSLKRSWKLTNYSIRYVNGLKETF--VSGTSLTKDT-VLDMRPDD 244 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLET-----YRSEFHKRLTQWLFPVIFGLISIVAAD 294 A D L N + + + + E +KR L + LI + Sbjct: 245 FSAYDNVFENLSNKELSEKIRKERIRGSGIWNDLLFEQYKRYLHPLSAFVLTLIGVA--L 302 Query: 295 KRALVRQRKKIH-PIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 VR + I I LS ++ VF F+ + P + ++ LF F L+ Sbjct: 303 SSRKVRGGVGLPLGIGILLSFAYIVFNQFAKMFSLKGGMPPLLAVIAPTLFFGLLGFYLL 362 Query: 354 IKK 356 K Sbjct: 363 RKA 365 >gi|323345623|ref|ZP_08085846.1| hypothetical protein HMPREF0663_12382 [Prevotella oralis ATCC 33269] gi|323093737|gb|EFZ36315.1| hypothetical protein HMPREF0663_12382 [Prevotella oralis ATCC 33269] Length = 412 Score = 96.6 bits (239), Expect = 6e-18, Method: Composition-based stats. Identities = 52/348 (14%), Positives = 126/348 (36%), Gaps = 10/348 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 +K + YI++ +++ S L I+ IA V + ++ + L I+ IP Sbjct: 52 IKRLDRYIIKKFIGTYIFSILLIIAIAIVFDFNENLSKFTQYHAPLHAIIFDYYANFIPY 111 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + G S L++P + +L+S F Sbjct: 112 YSNLFSPLFVFIAVIFFTSKLAGNSEIISMLAAGVSFRRLMRPYMISCVLISALSFYLSA 171 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P + I+Q +N+ ++ + I Y+ + F +D Sbjct: 172 YVIPHG-TVIRQNFESLYRNNRKLTSADNVQLQVGTGIIAYIQHYDDRSKRGYGFSLDKF 230 Query: 180 DTQTHKIYYAQSG----SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + + + +I + + + ++ + + + I+ K +Q E + Sbjct: 231 QEKKLISHMTATEISYDTISESKYHWTVRNWKIRQLKGLREHITSGGEKDTLIQMEPTDL 290 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + L + + + Y+ E+HKR+ I +I + + + Sbjct: 291 VYSKGQQETFTSPQLKDYISKQIDRGSGNVVQYQVEYHKRIAASFASFILTIIGVSLSSR 350 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 + R+ + I + +SFG + + N P+L ++ Sbjct: 351 K---RKGGMGLYLGIGMGLSFG-YILLQTVSSTFAINAGAPPMLAAWM 394 >gi|124514757|gb|EAY56269.1| putative permease, YjgP/YjgQ family [Leptospirillum rubarum] Length = 362 Score = 96.6 bits (239), Expect = 6e-18, Method: Composition-based stats. Identities = 65/369 (17%), Positives = 125/369 (33%), Gaps = 19/369 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ YI + + FL+ + + I VI +++I S +L ++ + Y V Sbjct: 1 MRILTRYIASELFKIFLLCFISLEAIYGVIDSVEKIKDFLSHHAALPLIGQYFFYRSIEV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 V P + T L +++N EL I G S + KP L L +L+S+ Sbjct: 61 SFRVLPMSGLLATLLTLGILSKNHELTAIRAAGISLVKATKPFLALGVLISLISIAMNYQ 120 Query: 121 IEPKCRSTIKQLSAKAQLA-----LTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI 175 + P + ++ L F + D+Y + + N L + + Sbjct: 121 LVPYAY-QMTDYIKDVRIDQGKSGNVTFELNNVWFRHGNQDIYGARTIRDGGNELDKVVL 179 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 D H + + ++ + DG + R P + I F+ Sbjct: 180 YHL-DRTFHLSWQVDAKTLRYHQGLWSFQDGHLTRFLPD-GSLKIESFQKMDTTLTRRPV 237 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFH-KRLTQWLFPVIFGLISIVAAD 294 K ++ L P + E R ++ R FP+ L+ ++A Sbjct: 238 DFTYEKTR---MTHLSYPELDRYIALLEKSHLPREKYEVTRDAMIAFPIAAFLMVLMAIP 294 Query: 295 KR-ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL-----FCISS 348 RQ ISL +S +W + + + +P + + F +S Sbjct: 295 FGIREGRQVGIAKGFGISLLLSMS-YWTIYSLGLALGKGGVLLPWISAWFANMIVFFVSI 353 Query: 349 IFLLMIKKK 357 L++ + Sbjct: 354 SLFLLLNRS 362 >gi|146299866|ref|YP_001194457.1| permease YjgP/YjgQ family protein [Flavobacterium johnsoniae UW101] gi|146154284|gb|ABQ05138.1| permease YjgP/YjgQ family protein [Flavobacterium johnsoniae UW101] Length = 486 Score = 96.6 bits (239), Expect = 6e-18, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 99/254 (38%), Gaps = 16/254 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y+L+ +F + + FI + + I+ ++ L +++K + +P + Sbjct: 1 MKILDKYLLKTFLFTFTTVFVILFFIFILQTVWLFISELAGKDLDLLLVVKFLLFSMPRI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V P + + ++ N E + ++G S ++ ++ +LSI F N Sbjct: 61 IPLVLPLSVLLASIMTFGNLAENYEFAAMKSSGISLQRAMRVLIIFIFVLSIVAFWFANN 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP--NNTLQGIFIVDS 178 + P A + E F + IK++K + N L G+ I + Sbjct: 121 VIPYAEYKFVNFRKNIAQAKPAMAIAEGQFNDVGT-YNIKVNKKSGENGNILTGVTIHEK 179 Query: 179 RDT--QTHKIYYAQSGSIDLDRQA----IILNDGEVHR-------KSPISKDISIMKFKS 225 + + + A+ G + ++ ++LN+G ++ + FK Sbjct: 180 ANNIGENKTVIKAKDGELISSEKSSILKLVLNNGFYYQDVTPKKYEDRAKLPFIKAAFKK 239 Query: 226 YTLQTESANSSTIV 239 + + + + + + Sbjct: 240 HIINIDLSELNKVD 253 >gi|154253776|ref|YP_001414600.1| permease YjgP/YjgQ family protein [Parvibaculum lavamentivorans DS-1] gi|154157726|gb|ABS64943.1| permease YjgP/YjgQ family protein [Parvibaculum lavamentivorans DS-1] Length = 363 Score = 96.2 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 52/337 (15%), Positives = 123/337 (36%), Gaps = 27/337 (8%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTVL 61 + Y+ R L++ + + ++I++++ + + + +++ I+ +P + Sbjct: 6 TLSRYLGRQFLGVVLLTFGVFIVLIFMIELVELLRRSADKPDVTFGLVVTIALMEVPRIG 65 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PF ++RN EL++ G S I P L +A ++ F+ N + Sbjct: 66 AQTLPFAVLFGGMAAFLRLSRNNELVVARAAGVSVWQFIAPALAVAFVIGAFVTTVFNPV 125 Query: 122 EPKCRSTIKQLSAK--AQLALTFSYLEENLFFRLDD---DLYIKISKYNPNNTLQGI--F 174 + +QL +K ++ A + L+ R D + + + L+ + F Sbjct: 126 SATLTTRAEQLESKYLSRQASFVAVSANGLWLRQADSTGQSVVHALRMDDGFRLRRVTIF 185 Query: 175 IVDSRDTQTHKIYYAQSGSIDLD----RQAIILNDGEVHRKSPISKDISIMKFKSYTLQT 230 + D + + + A + + ++ DGE R K+ +Y +T Sbjct: 186 LYDQGNRFSGR-IDAATARLRPGYWELADVWVMMDGEQSR-----------KYDTYRQET 233 Query: 231 ESANSSTIVLKANDQNLSF-LLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 A ++++SF L Y+ FH+ L ++ ++ Sbjct: 234 SLTQKQIEESFAREESISFWELPHFIATAEAAGFSARRYQIYFHQLLATP--ALLCTMVL 291 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYII 326 I AA + R + + + F +++ + I Sbjct: 292 IAAAFSLRVTRMGGLLQMVLGGIFSGFLIYFLGNLAI 328 >gi|149190545|ref|ZP_01868815.1| predicted permease [Vibrio shilonii AK1] gi|148835669|gb|EDL52636.1| predicted permease [Vibrio shilonii AK1] Length = 356 Score = 96.2 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 133/357 (37%), Gaps = 7/357 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + ++Y+ + I + ++ V ++ VI+ ++++ V + ++ L +P + Sbjct: 3 RILDVYVGKTIITTIILVLSVFVGLSAVIKFVEQLRSVGEGSYTMLSALYFVILGMPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + + + L + ++EL+++ G S++ + VL A+ L + + Sbjct: 63 ELFFSMAALLGSLVGLGMLASSSELVVMQAAGISKLRIGLSVLKTAVPLMVVVMALGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + L +A + + ++ R +D +I ISK N + + Sbjct: 123 APTTQQMARDLRLQATSGGSIVSVRNGVWARDAND-FIFISKVNGESVEGLNIWRFGENK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 Q + +A+S D + + K+ + + + + + + + Sbjct: 182 QLKETVFAESADYLGDNRWEMHRIQITDMKNDEALSKETLDKQVWETSLVPDKLAIVTVD 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADKRALV 299 N+ LS L + + Y F ++ TQ + + L++ V R++ Sbjct: 242 LNELPLSGLWDYT-QYLKDSEQDASRYELAFWRKATQPISVAVMMLMALSFVFGPLRSVT 300 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKI-EQNPYYIPILYLFLFCISSIFLLMIK 355 + + + + F + F + + +P + + +F ++ LL K Sbjct: 301 MGARILSGVIAGFT--FYISSEFFGPVSLVYGMSPLFGALGPSLVFLTIAMLLLRRK 355 >gi|146313280|ref|YP_001178354.1| permease YjgP/YjgQ family protein [Enterobacter sp. 638] gi|145320156|gb|ABP62303.1| permease YjgP/YjgQ family protein [Enterobacter sp. 638] Length = 360 Score = 96.2 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 51/361 (14%), Positives = 129/361 (35%), Gaps = 11/361 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + + I++ ++ + + + L + IP Sbjct: 5 GVLDRYIGKTI---FTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSIP 61 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L + + +EL+++ +G +R+ + V+ AI L + Sbjct: 62 KDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIG 121 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-D 177 + P+ + A+A + ++ L+ + ++ ++ I + ++ L G+ I Sbjct: 122 EWVAPQGEQMARNYRAQAMYGGSLMSTQQGLWAKDGNN-FVYIERVKGDDELGGVSIYAF 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + + YA + D + L+ E + + P S ++ Sbjct: 181 NDNRRLQSVRYAATAKFDSANRVWRLSQVDESNLQDPKQITGSQTVSGTWKTNLTPDKLG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + ++S L N + Y+ ++ Q + + L+++ Sbjct: 241 VVALDPDALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPMSVAVMMLMALSFIFGP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP-ILYLFLFCISSIFLLMIK 355 IS F V + + P I +L F + S++LL+ + Sbjct: 300 LRSVAMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPLIGALLPSASFFLISLWLLLRR 359 Query: 356 K 356 Sbjct: 360 S 360 >gi|258544322|ref|ZP_05704556.1| membrane protein [Cardiobacterium hominis ATCC 15826] gi|258520402|gb|EEV89261.1| membrane protein [Cardiobacterium hominis ATCC 15826] Length = 350 Score = 96.2 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 56/357 (15%), Positives = 126/357 (35%), Gaps = 11/357 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y+LR I + L++ F++ + +++QI + + +L ILL ++P Sbjct: 1 MTRFDRYLLRTILATSLIALAFLLAVDYIVQISVDADDLGQGNYTLAILLLQLLLVLPEK 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + TP + T L + E+ ++ G SR+ L + + A+++ + ++ Sbjct: 61 LLLYTPAAVLIGTIMGLGQLAAQNEIAVVRAAGISRLRLARAGIAFALIVGVLNIVNGET 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ + L +A + E+ ++ + + +I I NP+ +L I D Sbjct: 121 LAPQLADRSRLLRNQALGQSSDPGREQGIWLK-QQNTHIHIGALNPDGSLARIR-SYYSD 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + I A + + R + + +++ S + Sbjct: 179 ADSITISEADRATWQAPDWQLENPRAWRTRADKTERLTAPESWQNGATPQALHALSAVKS 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + L L N + +RL L L+++ R Sbjct: 239 AETLRELYTLTRFMAANGLNHQQQSLK----LWQRLLTPLTTAAMVLLALPF--TFGNAR 292 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQ---NPYYIPILYLFLFCISSIFLLMI 354 ++ + + + + I + P L + +F + + LLM Sbjct: 293 SGQQGTRLVTGILLGVAYYVISGVIANLALLLHWPPLLGAALPILIFTLPPLILLMR 349 >gi|301310576|ref|ZP_07216515.1| putative membrane protein [Bacteroides sp. 20_3] gi|300832150|gb|EFK62781.1| putative membrane protein [Bacteroides sp. 20_3] Length = 361 Score = 96.2 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 59/360 (16%), Positives = 125/360 (34%), Gaps = 10/360 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 +K + YI++ +++ + I+ I+ V I ++I+ + L I++ IP Sbjct: 5 LKRIDWYIIKQFLGTYVFAIALIISISVVFDINEKIDKFLNPDVPLKAIIVDYYLNFIPY 64 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + +E++ + +G S L+ P A +++I FI Sbjct: 65 FANLFSPLFTFIAVIFFTSKLADRSEIIAMLASGMSFRRLMLPYAVSATIIAIVTFILNA 124 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF-IVDS 178 I P T K Y++ ++ + Y+ + + F + Sbjct: 125 YIIPPANETRIDFQNKYIRNKKVDYVKNAQ-LEIEPGIIAYFDSYDARSNMGYRFSLEHF 183 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 D + A+S D Q + D + + + I K TL ++ Sbjct: 184 EDKKLISRLTAKSIKYDSLYQ-WTVIDYMIRDFDGMREHIFQGSRKDTTLTIVPSDFLIS 242 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 V L ++T++ E+HKR + I I + R + Sbjct: 243 VNDCETMTTPELNTYINRQKKRGIGNIQTFQIEYHKRFATIMAAFILTSIG-ASLSSRKI 301 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMIKK 356 I ++LS S + F + N Y P + ++ + I + + +K Sbjct: 302 KGGMGMNIGIGLALSFS---YILFMTVTSTFAINGYVSPAVAAWIPNIVYTFIAIFLYQK 358 >gi|332665471|ref|YP_004448259.1| permease YjgP/YjgQ family protein [Haliscomenobacter hydrossis DSM 1100] gi|332334285|gb|AEE51386.1| permease YjgP/YjgQ family protein [Haliscomenobacter hydrossis DSM 1100] Length = 365 Score = 96.2 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 52/357 (14%), Positives = 115/357 (32%), Gaps = 6/357 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPTV 60 K + YI++ +F + L + IA ++ +++ + I+L+ + + Sbjct: 6 KILDWYIIKKFLSTFFFTVLIFLMIAVILDFSEKVEKFIEEPITTREIVLQYYPSFMLWI 65 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + C + + M ++E++ I N G S L++ F A L++ + + Sbjct: 66 GGQLWSVCTLIAVIFFTSRMAYSSEIMSIFNAGVSFNRLMRSYFFGAAFLTLLYLLCTHY 125 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISK-YNPNNTLQGIFIVDSR 179 I P + + K N+ + + + I ++T + I + Sbjct: 126 IMPVGEKYRQDIVHKYIDKSDDKGKTTNIHLFVAPNTKVFIGFYRKDDSTARDFRIEHFK 185 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIM--KFKSYTLQTESANSST 237 + Q A + + L D H + + +D+ + + K TL + Sbjct: 186 NQQLVSYTKADRAEYLPETRKWRLWDYSSHSFNGLKEDLKMHLAESKDTTLSLYPEDFVD 245 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + L+ Y E ++R + I I + A Sbjct: 246 YSSQQSMMTTPRLMKYIRQQNERGASNTRKYLFELYRRTADPVTIFILTFIGMAIA--SR 303 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 VR H + VF + + Q +L + + L +I Sbjct: 304 KVRGGFGFHLALGIGVGAIFVFLSKFTNVFALGQTIPVWLGAWLPNLVFAFVALRLI 360 >gi|94984156|ref|YP_603520.1| permease YjgP/YjgQ [Deinococcus geothermalis DSM 11300] gi|94554437|gb|ABF44351.1| permease YjgP/YjgQ [Deinococcus geothermalis DSM 11300] Length = 352 Score = 96.2 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 45/364 (12%), Positives = 110/364 (30%), Gaps = 28/364 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + +LR + R + + + + + ++ + L + G + P L Sbjct: 7 TLTRSVLREVLRWYAAGVALFLILQLTDALSTTVGVLLLYHATPLEALSVFGAIAPDKLN 66 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + ++EL + G S + L+ P+ +L+ + F++ + Sbjct: 67 RSLVLAVPFAVLLTFGRLQGDSELKAMFAAGVSPLRLVWPLAVPFVLVGVLAFVNTGYVV 126 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-----LQGIFIVD 177 P + + + + ++N + + L G+ I Sbjct: 127 PGGLARWDRAWYTIYGTVPPAPSQDN-YTFAPPGALFYAGRVRNGAESGVAQLDGVLI-- 183 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDIS-IMKFKSYTLQTESANSS 236 + + AQSG D + ++D + R + ++ + F ++ Sbjct: 184 ---ERGGETVTAQSGIWDTQARTWTVSDAWITRPGQDPRQVAGPLVF------PQTDTLR 234 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 A + L + PE + R P++F L++ V Sbjct: 235 PPQPPAAQVSTPVLRARLAADEYATPEQRRVDEHQLATRYADPCTPIVFALVAGVVGLL- 293 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL----FCISSIFLL 352 + F + + VF+ ++ + P L +L F + + L Sbjct: 294 -----LRNRAGAFAATLLVILVFYVLWTTAPQLARVGALPPTLAAWLPNIVFFLVAAALA 348 Query: 353 MIKK 356 + Sbjct: 349 WRLR 352 >gi|261342655|ref|ZP_05970513.1| membrane protein, YjgP/YjgQ family [Enterobacter cancerogenus ATCC 35316] gi|288315303|gb|EFC54241.1| membrane protein, YjgP/YjgQ family [Enterobacter cancerogenus ATCC 35316] Length = 360 Score = 96.2 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 49/361 (13%), Positives = 128/361 (35%), Gaps = 11/361 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI R I F + + + + I++ ++ + + + + + +P Sbjct: 5 GVLDRYIGRTI---FTTIMMTLFMLVSLSGIIKFVDQLKKAGQGNYDAMGAGMYTLLSVP 61 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L + + +EL+++ +G +R+ + V+ AI L + Sbjct: 62 KDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIG 121 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-D 177 + P+ + A+A + ++ L+ + ++ ++ I + ++ L G+ I Sbjct: 122 EWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNN-FVYIERVKGDDELGGVSIYAF 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + + +A S D + + L+ E + P + ++ Sbjct: 181 NNERRLQSVRHASSAKFDAEHKQWRLSQVDESNLTDPKQITGTQTVTGTWKTDLTPDKLG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + ++S L N + Y+ ++ Q L + L+++ Sbjct: 241 VVALDPDALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 IS F V F + P +L F + S+++L+ + Sbjct: 300 LRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFLLISLWMLLRR 359 Query: 356 K 356 Sbjct: 360 S 360 >gi|237718555|ref|ZP_04549036.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|293373071|ref|ZP_06619439.1| putative membrane protein [Bacteroides ovatus SD CMC 3f] gi|299145713|ref|ZP_07038781.1| putative membrane protein [Bacteroides sp. 3_1_23] gi|229452015|gb|EEO57806.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|292631957|gb|EFF50567.1| putative membrane protein [Bacteroides ovatus SD CMC 3f] gi|298516204|gb|EFI40085.1| putative membrane protein [Bacteroides sp. 3_1_23] Length = 365 Score = 96.2 bits (238), Expect = 8e-18, Method: Composition-based stats. Identities = 58/369 (15%), Positives = 134/369 (36%), Gaps = 26/369 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 +K + YI++ +++ + I+ IA V ++++ + + I+ + IP Sbjct: 7 IKRLDWYIIKKFLGTYVFAIALIISIAVVFDFNEKMDKLMEHEAPWDKIIFEYYMNFIPY 66 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + +TG S +++P + A ++++ F + Sbjct: 67 FSNLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMMRPYMISAAIIALVTFTLSS 126 Query: 120 IIEPKC---RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + PK R + K + + S ++ +D + I YN F + Sbjct: 127 YVIPKGSVTRLNFEDRYIKPKKQNSVSNVQ----LEVDSGVIAYIDNYNNAMKTGNRFSL 182 Query: 177 DS-RDTQTHKIYYAQSGSIDLDRQA-IILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 D D + A+ + D ++D V + + I K Sbjct: 183 DKFVDKKLVSHLTARRITYDTTTVHKWTIHDYMVRELDGLKEK--ITKGDRIDSIINMEP 240 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLE-----TYRSEFHKRLTQWLFPVIFGLIS 289 S +++K + L+ +P ++ + + + E+HKR+ I +I Sbjct: 241 SDFLIMKNQQEMLT---SPELSDYIVKQKRRGFANIKEFEIEYHKRIAMSFASFILTIIG 297 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--FCIS 347 + R I + LS S + F I N P + +++ + Sbjct: 298 VS-LSSRKTKGGMGLHLGIGLGLSFS---YILFQTITSTFAVNGNVPPAVAVWIPNILYA 353 Query: 348 SIFLLMIKK 356 I + +K Sbjct: 354 GIAFFLYQK 362 >gi|332829399|gb|EGK02053.1| hypothetical protein HMPREF9455_00175 [Dysgonomonas gadei ATCC BAA-286] Length = 365 Score = 96.2 bits (238), Expect = 8e-18, Method: Composition-based stats. Identities = 56/363 (15%), Positives = 125/363 (34%), Gaps = 10/363 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 + + YI++ +++ S + I+ IA V I ++++ L I+ +P Sbjct: 4 LSILDRYIIKKFLGTYIFSIILIISIAVVFDINEKLDKFLDKKAPLTAIIFDYYVNFVPY 63 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + + + + + N+E++ + + G S L+KP + A ++++F F+ + Sbjct: 64 YTNLFSALFVFIAVIFFTSKLADNSEIIAMLSNGMSFKRLMKPYMISAGIIAVFSFVLSS 123 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDS 178 I P T + K + Y + ++D + + I +++ + + Sbjct: 124 FIIPPANVTRIKFQNKYVRDKSVEY-ASGIQLQVDKGVILYIERFDNKTKEGYNLSLDKI 182 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 D + AQ D L + ++ + + IS TL ++ Sbjct: 183 EDKELKSRLTAQRIKYDSAY-HWELYNYKIRELQGMREVISNGDKIDTTLNVVPSDFLIS 241 Query: 239 VLKANDQNLSFLL-----NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 V L + + + EFHKR I +I + Sbjct: 242 VNDFEQMTTPVLYKYIQRQRDKGIATVGDVSITQFEIEFHKRFASVFSAFILTIIG-ASL 300 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 R + I + LS+S+ +F S P ++ + L ++ L Sbjct: 301 SARKVKGGMGLNIGIGLGLSVSYIMFQTVSSSFAVSGTMPAWLAVWIPNLVFMAIAAYLY 360 Query: 354 IKK 356 + Sbjct: 361 SRA 363 >gi|328950000|ref|YP_004367335.1| permease YjgP/YjgQ family protein [Marinithermus hydrothermalis DSM 14884] gi|328450324|gb|AEB11225.1| permease YjgP/YjgQ family protein [Marinithermus hydrothermalis DSM 14884] Length = 378 Score = 96.2 bits (238), Expect = 8e-18, Method: Composition-based stats. Identities = 49/360 (13%), Positives = 112/360 (31%), Gaps = 40/360 (11%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YILR F L V + + +L R + L++ Y +P V Sbjct: 1 MTRLDRYILREAFPPFAFGLLLYVGLILLSNLLGRAQWLV--GVEFWGLVRWLWYQVPFV 58 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + T ++R ELL+I G + + + A +L Sbjct: 59 LNQTLPVAVLLATLLAYGRLSRENELLVIQAGGLPLLRTARWLFVAAFVLVGVSLYMSET 118 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLE-ENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P+ L + + + G+ + + Sbjct: 119 LIPRANERAAVLWWDELTSKGNGLARLAGQDVPVGPYRLFFARYDYRTKEMVGVRL-ELW 177 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +T + +A G ++ +R ++ + + + + F S L+ + +V Sbjct: 178 QGETLAVIFADRGRLEENRLRLV----NFRQYTLDLTRLPLPDFAS--LEEAEQHLRRLV 231 Query: 240 L-----KANDQNLSFLL---------------NPNPNNPNYRPELLET----------YR 269 + + L+ LL + N +Y E ++ R Sbjct: 232 RMQNVARDPSRTLTVLLPKTRSQLLAQHGGGGFEDANPISYWYERIQKTVNSPREHLEAR 291 Query: 270 SEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI 329 +FH L ++ ++++ A ++A + + +++ G ++ + Sbjct: 292 VQFHSMLAVPFANLVVLVLALPIAVRKAGSTGLAFGYSLIVTIGYYLVFTLGKLLALNGV 351 >gi|325473492|gb|EGC76687.1| membrane protein [Treponema denticola F0402] Length = 357 Score = 95.8 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 60/363 (16%), Positives = 124/363 (34%), Gaps = 10/363 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + Y+L+ +F+++ LF V + + + I + ++K+ IP Sbjct: 1 MRLLQRYLLKLFIPTFVVAMLFFVLLLQLGDLFANIVAYLQNGAQFKDIVKVMWLYIPKC 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + ++ EL I + G S P+L L S+ + E+ Sbjct: 61 IAYSVPLAILFAGSYTMGNLYAQNELTSIFSAGISLGRFTLPLLVLGFFFSVGMIFFEDN 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 + K QLS K ++ + + +N N TL +I+ R Sbjct: 121 VVIKYFYEKTQLSKKLLQEEESLDTQDLVILSELGKIVYTADYFNAENQTLANAYII-VR 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 D + +S + + + EV+R + + + +E + Sbjct: 180 DEDGNLSLVIKSSHMVWNEDRWTTDSAEVYRFDEKNSVSCLNNIPDNIILSEPPANFQKN 239 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L + D+ S++H+R + I SI K Sbjct: 240 LSSVDEMRISEAKEFIAALKKNGLPYYEALSKYHRRFSFPFTIFIVLFFSISLGGKF--- 296 Query: 300 RQRKKIHPIFISLSISFG-VFWGFSYIIHKIEQNPYYIPI--LYLFLFCISSIFLLMIKK 356 +K I + I S+ +F+ + + Y P+ + +F S + + ++KK Sbjct: 297 --KKNILLMSILFSLGIATLFYVTEMVTMLSAKWEYISPLAGAWTPIFIFSILSVYLLKK 354 Query: 357 KYT 359 T Sbjct: 355 SRT 357 >gi|86133725|ref|ZP_01052307.1| predicted permease YjgP/YjgQ family [Polaribacter sp. MED152] gi|85820588|gb|EAQ41735.1| predicted permease YjgP/YjgQ family [Polaribacter sp. MED152] Length = 363 Score = 95.8 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 64/373 (17%), Positives = 131/373 (35%), Gaps = 27/373 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTES--LNILLKISGYLIP 58 MK + YIL+ +FL + L ++ IA I I ++I+ + L I+ + I Sbjct: 1 MKILDWYILKRFLVTFLFTLLILIPIAIAIDIAEKIDNFLEHQDLGFLQIVDEYYINFII 60 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 P + + ++ NTE++ I+N S + P A L+++ Sbjct: 61 YYANTFMPLALFIAVILFTSKLSNNTEIIAINNAKISFTRFLFPYFIGATLITLLSLAMN 120 Query: 119 NIIEPKCRSTIKQ----LSAKAQLALTFSYLEENLFF-RLDDDLYIKISKYNPNNTLQGI 173 + + P K+ + F Y+ + F +L D YI I +N + Sbjct: 121 HFVVPSSSKIRKKFELTYIKNKRQNQEFKYISD--FSLQLTDSTYIFIRNFNTQSNAGYD 178 Query: 174 FIVDSRDT-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT-E 231 F + D A + + L + + + I F + T Sbjct: 179 FTSEVYDGLTMKSKLVADNIRYNDKDSTFALQNWRLRKIYDDKDSI----FSGNKIDTVF 234 Query: 232 SANSSTIVLK---ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 + ++ K + + LL + + L Y EFHKR + + + +I Sbjct: 235 NFTPRDLIYKSALSQEMPSDELLKFIEISEKRGVKNLNAYLVEFHKRTSLPIASYVLTII 294 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY----YIPILYLFLF 344 ++ A R+R+ + +++ + + F I ++ +I + +F Sbjct: 295 AVALA-----FRKRRGGTGVNLAIGVGMMFIYVFLLKISEVLGAVAGVNSFIYVWMPNIF 349 Query: 345 CISSIFLLMIKKK 357 S L + + Sbjct: 350 FGSIALYLYLNAR 362 >gi|297184152|gb|ADI20271.1| hypothetical protein [uncultured Sphingobacterium sp. EB080_L08E11] Length = 374 Score = 95.8 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 46/332 (13%), Positives = 111/332 (33%), Gaps = 20/332 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YIL SF ++ + I+ IA V I ++++ + I+ I Sbjct: 1 MNKLDRYILLKFIGSFFLTMVLILSIAVVFDISEKLDDFQNGASMNEIIFDYYINFIAFY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + + T + M N+E++ I +GTS L++P A ++ ++ Sbjct: 61 GNLFSALILFISTIWFTSRMASNSEIVAILTSGTSFRRLLRPYFIGASIICALSLTLNHL 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS-----KYNPNNTLQGIFI 175 + P+ + + + + + + ++ Y+ + + +F Sbjct: 121 LVPQTNIK-RIAFEEKYVTGVNRPISQKMHRQVLPGHYVYFETFSGVRESGYQMTYEVF- 178 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKS---YTLQTES 232 D Q A +D L++ + + + F L S Sbjct: 179 ---EDHQLKSKLSADFVRLDTATGRWRLDNFRLRTLDEKGGE--QISFGRRMDTALAFTS 233 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + + N L E + +Y+ E +R + + +F L+++ Sbjct: 234 EQIAPKLNSIATMNSKELSRFIAQEELTGNENIASYQMEMQRRTSYPVSSYVFVLLAV-- 291 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSY 324 ++++ I I++ + + F Sbjct: 292 ---GLASQKKRGGLGINIAIGLVLTAIYIFFM 320 >gi|150025640|ref|YP_001296466.1| hypothetical protein FP1590 [Flavobacterium psychrophilum JIP02/86] gi|149772181|emb|CAL43657.1| Protein of unknown function [Flavobacterium psychrophilum JIP02/86] Length = 484 Score = 95.8 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 49/254 (19%), Positives = 98/254 (38%), Gaps = 16/254 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y+L+ SF + ++FI + + I+ ++ L ++LK + +P + Sbjct: 1 MKILDKYLLKTYLTSFFGVFIILIFIFILQTVWLFISELAGKDLDLILILKFLLFKMPGL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V P + M N E + + G S +K + F LLSI F N Sbjct: 61 IPLVLPLSVLLSAIMTFGDMAENYEFAAMKSAGISFQRTMKGLTFFIFLLSIGAFFFANN 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT--LQGIFIVDS 178 + P + E F + ++ IK++K + N L+G+ I Sbjct: 121 VIPYAEFKFNNFRKNIAQVKPAMAIAEGQFSTI-GNINIKVNKKSGTNGEFLEGVTIHKK 179 Query: 179 RD--TQTHKIYYAQSGSIDLDRQ----AIILNDGEVHR-------KSPISKDISIMKFKS 225 D + ++SG + + ++L DG + + + + FK Sbjct: 180 SDLGEGAKTVIKSKSGQLISSEESSLLQLVLIDGYYYEDITPKSYEDRQKMPFAKVNFKR 239 Query: 226 YTLQTESANSSTIV 239 YT+ + + + + Sbjct: 240 YTINIDLSKLNKVD 253 Score = 37.2 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 42/102 (41%), Gaps = 6/102 (5%) Query: 257 NPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISF 316 + +Y+ + + ++ +++ ++ I A A++R+ PI ++ I F Sbjct: 351 SLDYKKKDINSFWISIYEKFVIAFACILMFFIG---APLGAIIRKGGLGLPIVFAMLI-F 406 Query: 317 GVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMIKK 356 F + K+ Q P L ++ F + + + + +K Sbjct: 407 ITFHFLNTFGKKVAQESGMAPFLGAWISFFLLVPLAIFLTRK 448 >gi|294788100|ref|ZP_06753344.1| permease, YjgP/YjgQ family [Simonsiella muelleri ATCC 29453] gi|294484393|gb|EFG32076.1| permease, YjgP/YjgQ family [Simonsiella muelleri ATCC 29453] Length = 355 Score = 95.8 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 53/365 (14%), Positives = 135/365 (36%), Gaps = 15/365 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+++ + + L ++ + I +L I V + K +P Sbjct: 1 MKLLTKYLIKRLTVMSCYALLAVLALYSFIDLLSEIGNVGKGNYTGWTAFKYIIMQMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ ++ ++EL +I +G S +I+ +L + + ++ + Sbjct: 61 AYQLMPLATLIGGLLALSQLSSSSELAVIKTSGLSTADIIRIILKFSAIFALATILLGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ + A+ + + + L+ R +++ + I+ P+NTL I I + Sbjct: 121 LAPELGRRADAMKTTAKESSITASVT-GLWLRQGENI-VNIAAMLPDNTLTNIRIW-RYN 177 Query: 181 TQTHKI--YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 Q A+ + + +L + ++ + + +I +K ++ + + Sbjct: 178 PQFELTEAIIAEKAQVHDGK--WVLQNAKISQLTNKHINIQHIKQMNWQTNINQNLLNVL 235 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 V+K + S L + Y + +L + ++ L+++ Sbjct: 236 VVKPEQMSFSALTR-YIKYLKKNQQQTSAYDVVWWNKLVYPIATMVMSLVALAF--TPNS 292 Query: 299 VRQRKKIHPIFISLSISFGVFW---GFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 R +F + + F+ F + ++ IL F + +++L I Sbjct: 293 ARHSNMGLKLFSGICLGLLFFFTGRLFGFTTQLYGVPAFFSAILPTATFALWAVYL--IH 350 Query: 356 KKYTK 360 K+ T+ Sbjct: 351 KQETR 355 >gi|254672902|emb|CBA07219.1| conserved hypothetical protein [Neisseria meningitidis alpha275] Length = 210 Score = 95.8 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 32/200 (16%), Positives = 72/200 (36%), Gaps = 3/200 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +IL + + + +L + +P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGKGSYGIWEMLGYTALKMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + +EL +I +G S L+ + + +I Sbjct: 61 AYELMPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLILSQFGFIFAIATVALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A A + ++ + + + I + + P++TL GI I D Sbjct: 121 VAPTLSQKAENIKAAAINGKISTGNT-GIWLK-EKNSIINVREMLPDHTLLGIKIWARND 178 Query: 181 TQT-HKIYYAQSGSIDLDRQ 199 + A S ++ D Sbjct: 179 KNELAEAVEADSAVLNSDGS 198 >gi|310766280|gb|ADP11230.1| Inner membrane protein [Erwinia sp. Ejp617] Length = 358 Score = 95.8 bits (237), Expect = 9e-18, Method: Composition-based stats. Identities = 54/362 (14%), Positives = 126/362 (34%), Gaps = 11/362 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + I++ ++ + + + +L + +P Sbjct: 3 GVLDRYIGKTI---FNTIMATLFMLVSLSGIIKFVDQLRKTGQGEYTVLGAGLYTLLSVP 59 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L ++ + +EL+++ +G +R+ + V+ AI L + Sbjct: 60 KDIEIFFPMAALLGALLGLGALAQRSELVVMQASGFTRMQIAASVMKTAIPLVLLTMAIG 119 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 + P+ + A+ + + + L+ + D+ +I I + +N L GI I + Sbjct: 120 EFVAPQGEQMARNYRAQQLMGGSLLSTQSGLWAKDGDN-FIFIERIRDDNQLSGISIYNF 178 Query: 179 RDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRKSPISK-DISIMKFKSYTLQTESANSS 236 + K YA S + D++ L + S + S + Sbjct: 179 DHERRLKTVRYAASAKYNADKKLWELAQVDQSDLSDAQQIKGSQTLSGEWNTTLTPDKLG 238 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L ++S L + + ++ Y+ ++ Q L + L+++ Sbjct: 239 VVALDPGALSISGLYSYSK-YLKQSGQMAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGP 297 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 IS F V + + P + L L +I L M+ K Sbjct: 298 LRSVSMGMRVVTGISFGFLFYVLDQIFGPLSLVYNIPPILGAL-LPSAAFFAISLAMLVK 356 Query: 357 KY 358 + Sbjct: 357 RR 358 >gi|260754017|ref|YP_003226910.1| permease YjgP/YjgQ family protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258553380|gb|ACV76326.1| permease YjgP/YjgQ family protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 364 Score = 95.8 bits (237), Expect = 9e-18, Method: Composition-based stats. Identities = 50/345 (14%), Positives = 115/345 (33%), Gaps = 18/345 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQIL---QRINLVSSSTESLNILLKISGYLIP 58 + Y+ + ++FI + +L RI V + ++ L P Sbjct: 9 RQIAFYLSKLFVVRCFAVLAALIFILQTLDMLGESARILAVKGNGQA--ELFHYVLLRTP 66 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 ++ PF + L+++N+N+E++ + G S ++ P++ L+ F+ Sbjct: 67 QLIARFLPFAVLLGVLITLSTLNQNSEIISMKAAGISAHQILMPLIASCFLIGCVSFVFN 126 Query: 119 NIIEPKCRSTIKQLSA-KAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN---TLQGIF 174 + + + + + A + N++ R D L I + L GI Sbjct: 127 DHLVTRATAKLDAWQAVDYGQPPPAATSGVNIWLRDGDHL-IHVDNVQGYGDNVRLSGIT 185 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + + I A +G + +V + ++ Sbjct: 186 VYNRSQKTLVSILSADTGQWTGHGWHLN----KVKSFDVAADTVTEKSVLDINTDLPPER 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + +KA++ + L + + ++ R T ++ ++ VA Sbjct: 242 FTLADVKADEMEVVPLYRAIKA-LDAAGRPTDELKASLIHRFTGAFAAILMPILGSVAGF 300 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL 339 L R + I I +S+ F F ++ + + Y P+L Sbjct: 301 G--LARSGRLFVRIVIGMSLGFAYFVADNFAL-AMGNLGTYPPLL 342 >gi|160884582|ref|ZP_02065585.1| hypothetical protein BACOVA_02569 [Bacteroides ovatus ATCC 8483] gi|260174906|ref|ZP_05761318.1| hypothetical protein BacD2_23825 [Bacteroides sp. D2] gi|315923149|ref|ZP_07919389.1| conserved hypothetical protein [Bacteroides sp. D2] gi|156110321|gb|EDO12066.1| hypothetical protein BACOVA_02569 [Bacteroides ovatus ATCC 8483] gi|313697024|gb|EFS33859.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 365 Score = 95.8 bits (237), Expect = 9e-18, Method: Composition-based stats. Identities = 58/369 (15%), Positives = 134/369 (36%), Gaps = 26/369 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 +K + YI++ +++ + I+ IA V ++++ + + I+ + IP Sbjct: 7 IKRLDWYIIKKFLGTYVFAIALIISIAVVFDFNEKMDKLMEHEAPWDKIIFEYYMNFIPY 66 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + +TG S +++P + A ++++ F + Sbjct: 67 FSNLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMMRPYMISAAIIALVTFTLSS 126 Query: 120 IIEPKC---RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + PK R + K + + S ++ +D + I YN F + Sbjct: 127 YVIPKGSVTRLNFEDRYIKPKKQNSVSNVQ----LEVDSGVIAYIDNYNNAMKTGNRFSL 182 Query: 177 DS-RDTQTHKIYYAQSGSIDLDRQA-IILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 D D + A+ + D ++D V + + I K Sbjct: 183 DKFVDKKLVSHLTARRITYDTTTVHKWTIHDYMVRELDGLKEK--ITKGDRIDSIINMEP 240 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLE-----TYRSEFHKRLTQWLFPVIFGLIS 289 S +++K + L+ +P ++ + + + E+HKR+ I +I Sbjct: 241 SDFLIMKNQQEMLT---SPELSDYIAKQKRRGFANIKEFEIEYHKRIAMSFASFILTIIG 297 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--FCIS 347 + R I + LS S + F I N P + +++ + Sbjct: 298 VS-LSSRKTKGGMGLHLGIGLGLSFS---YILFQTITSTFAVNGNVPPAVAVWIPNILYA 353 Query: 348 SIFLLMIKK 356 I + +K Sbjct: 354 GIAFFLYQK 362 >gi|270157966|ref|ZP_06186623.1| putativeYjgP/YjgQ family permease [Legionella longbeachae D-4968] gi|289163767|ref|YP_003453905.1| membrane protein [Legionella longbeachae NSW150] gi|269989991|gb|EEZ96245.1| putativeYjgP/YjgQ family permease [Legionella longbeachae D-4968] gi|288856940|emb|CBJ10754.1| putative membrane protein [Legionella longbeachae NSW150] Length = 356 Score = 95.8 bits (237), Expect = 9e-18, Method: Composition-based stats. Identities = 58/361 (16%), Positives = 120/361 (33%), Gaps = 11/361 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI + + S + L ++ + I + +I+ + + +P Sbjct: 3 MKILDRYIAKTVIGSIGLVTLMLIGLQIFILFVDQISDLGRVDYGIVQATFFVMLQMPYQ 62 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + T L + ++EL+I+ +G S + VL ++LL IF+ + Sbjct: 63 VYLFFPMASLLGTLIGLGILANHSELVIMRASGMSIGQITVAVLKASVLLIIFVTVLGET 122 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI--FIVDS 178 + P A + + R ++D +I + NN L I F D+ Sbjct: 123 LVPYLSHYANDYKTAAISGGQTLRTSKGFWLRYNND-FISVGVVLSNNVLNNIYQFRFDN 181 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--S 236 + + + + I D V + F S + Sbjct: 182 QHHLKMSRFIRE---VRHTPTGWIAYD--VQQTEFGGDQTKAQAFASLPWDVSVKPKILT 236 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + ++ NL L N + + Y+ F +RL Q ++ ++SI Sbjct: 237 ISSIDPDEMNLREL-NRYIRAQKLNHQNIHNYQFAFLQRLIQPFTTMVMMILSIPFIFGP 295 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + ++ SF + F + + Q P + L + LM + Sbjct: 296 LRSTTMGSKLLVGAAVGFSFHILNRFFGPLSTVFQLPPELSALGPTVIFALLGLYLMKRV 355 Query: 357 K 357 + Sbjct: 356 R 356 >gi|237713241|ref|ZP_04543722.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262406619|ref|ZP_06083168.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294646169|ref|ZP_06723825.1| putative membrane protein [Bacteroides ovatus SD CC 2a] gi|294807861|ref|ZP_06766643.1| putative membrane protein [Bacteroides xylanisolvens SD CC 1b] gi|298484045|ref|ZP_07002214.1| membrane protein [Bacteroides sp. D22] gi|229446708|gb|EEO52499.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262355322|gb|EEZ04413.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292638498|gb|EFF56860.1| putative membrane protein [Bacteroides ovatus SD CC 2a] gi|294444923|gb|EFG13608.1| putative membrane protein [Bacteroides xylanisolvens SD CC 1b] gi|295084257|emb|CBK65780.1| Predicted permeases [Bacteroides xylanisolvens XB1A] gi|298269826|gb|EFI11418.1| membrane protein [Bacteroides sp. D22] Length = 365 Score = 95.8 bits (237), Expect = 1e-17, Method: Composition-based stats. Identities = 55/364 (15%), Positives = 130/364 (35%), Gaps = 16/364 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 +K + YI++ +++ + I+ IA V ++++ + + I+ + IP Sbjct: 7 IKRLDWYIIKKFLGTYVFAIALIISIAVVFDFNEKMDKLMEHEAPWDKIIFEYYMNFIPY 66 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + +TG S +++P + A ++++ F + Sbjct: 67 FSNLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMMRPYMISAAIIALTTFTLSS 126 Query: 120 IIEPKC---RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + PK R + K + + S ++ +D + I YN F + Sbjct: 127 YVIPKGSVTRLNFEDRYIKPKKQNSVSNVQ----LEVDSGVIAYIDNYNNAMKTGNRFSL 182 Query: 177 DS-RDTQTHKIYYAQSGSIDLDRQA-IILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 D D + A+ + D ++D V + + I+ + E ++ Sbjct: 183 DKFVDKKLVSHLTARRITYDTATVHKWTIHDYMVRELDGLKEKITKGDRIDSIINMEPSD 242 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + + L + ++ + E+HKR+ I +I + Sbjct: 243 FLIMKNQQEMLTSPELSDYIEKQKRRGFANIKEFEIEYHKRIAMSFASFILTIIGVS-LS 301 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--FCISSIFLL 352 R I + LS S + F I N P + +++ + I Sbjct: 302 SRKTKGGMGLHLGIGLGLSFS---YILFQTITSTFAVNGNVPPAIAVWIPNILYAGIAFF 358 Query: 353 MIKK 356 + +K Sbjct: 359 LYQK 362 >gi|262045293|ref|ZP_06018318.1| YjgP/YjgQ family membrane protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259037349|gb|EEW38595.1| YjgP/YjgQ family membrane protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 360 Score = 95.8 bits (237), Expect = 1e-17, Method: Composition-based stats. Identities = 55/361 (15%), Positives = 125/361 (34%), Gaps = 11/361 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + + I++ ++ + S + L + +P Sbjct: 5 GVLDRYIGKTI---FNTIMMTLFMLVSLSGIIKFVDQLKKSGQGSYDALGSGLYTILSVP 61 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L + + +EL+++ G +R+ + V+ AI L + Sbjct: 62 KDIQIFFPMAALLGALLGLGMLAQRSELVVMQAFGFTRLQVALAVMKTAIPLVLLTMAIG 121 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-D 177 + P+ + A+ + ++ L+ + + ++ I + N+ L G+ I Sbjct: 122 EWVAPQGEQMARNYRAQQMYGGSLLSTQQGLWAKDGHN-FVYIERVKGNDELGGVSIYAF 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + + YA S D + + L+ E P S M ++ Sbjct: 181 NPERRLQSVRYAASAKFDSENKVWRLSQVDESDLTDPKQVTGSQMVSGTWKTNLTPDKLG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + ++S L N + Y+ ++ Q L + L+++ Sbjct: 241 VVALDPDALSISGLHN-YVKYLKSSGQDPGRYQLNMWSKIFQPLSVAVMMLMALSFIFGP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 IS F V F + P +L F + S++L+M K Sbjct: 300 LRSVPMGVRVVTGISFGFIFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLMMRK 359 Query: 356 K 356 Sbjct: 360 A 360 >gi|85060085|ref|YP_455787.1| putative transport protein [Sodalis glossinidius str. 'morsitans'] gi|84780605|dbj|BAE75382.1| putative transport protein [Sodalis glossinidius str. 'morsitans'] Length = 356 Score = 95.8 bits (237), Expect = 1e-17, Method: Composition-based stats. Identities = 53/357 (14%), Positives = 118/357 (33%), Gaps = 5/357 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI + I + +M+ +V ++ +I+ ++++ V S + IP + Sbjct: 3 GVLDRYIGKTIFNTIMMTLFMLVSLSGIIKFVEQLRKVGQGGYSALGAGLFTLLSIPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L S+ +EL+++ +G SR+ + V+ AI L + + Sbjct: 63 EIFFPMSALLGALLGLGSLATRSELVVMQASGFSRMQVAGSVMKTAIPLVLLTMAIGEWV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + + L+ + +D +I I + ++ L G+ I Sbjct: 123 APAGEQMAYNYRTQMIYGGSMLSTQNGLWAKDGND-FIFIERVVGSDELAGVNIYHFDKA 181 Query: 182 QT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + YA + + + D + + + L Sbjct: 182 DRLQSLRYAATATFSNGSWKLSQVDESDLTNDKQITGRQTLN-GEWKTNLTPDKLGVVAL 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + N ++S L N N + Y+ ++ + L+++ Sbjct: 241 EPNSLSISGLYN-YVNYLKQSGQESNRYQLNMWSKIFSPFSVAVMMLMALSFIFGPLRSV 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-NPYYIPILYLFLFCISSIFLLMIKK 356 I IS F V + + P + +L F I SI +L+ + Sbjct: 300 PMGVRVVIGISFGFLFYVLDQIFGPLSLVYNMPPVFGALLPSMAFLIISIVMLLRCR 356 >gi|300718540|ref|YP_003743343.1| permease [Erwinia billingiae Eb661] gi|299064376|emb|CAX61496.1| putative permease [Erwinia billingiae Eb661] Length = 358 Score = 95.8 bits (237), Expect = 1e-17, Method: Composition-based stats. Identities = 52/361 (14%), Positives = 130/361 (36%), Gaps = 11/361 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + I++ ++ + + + L + +P Sbjct: 3 GVLDRYIGKTI---FNTIMATLFMLVSLSGIIKFVDQLRKTGQGEYTALGAGLYTVLSVP 59 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L ++ + +EL+++ +G +R+ + V+ AI L + Sbjct: 60 KDIEIFFPMAALLGALLGLGTLAQRSELVVMQASGFTRMQIAASVMKTAIPLVLLTMAIG 119 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD- 177 + P+ + A+ + + + L+ + D+ +I I + N+ L GI I Sbjct: 120 EFVAPQGEQMARNYRAQQLVGGSLLSTQNGLWAKDGDN-FIFIEQIKDNSELSGISIYSF 178 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKS-PISKDISIMKFKSYTLQTESANSS 236 +++ + + YA S ++D++ L + + + P S + Sbjct: 179 NKERRLETVRYAASAKYNVDKKRWDLAEVDQSNLTDPKQVTGSQTLSGEWKTTLTPDKLG 238 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + ++S L N ++ Y+ ++ Q L + L+++ Sbjct: 239 VVALDPDALSISGLYN-YVKYLKQSGQVSSRYQLNMWSKIFQPLSVAVMMLMALSFIFGP 297 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-PYYIPILYLFLFCISSIFLLMIK 355 IS F V + + P +L F S+++L+ + Sbjct: 298 LRSVSMGMRVVTGISFGFIFYVLDQIFGPLSLVYNIPPIMGALLPSGAFFAISVYMLLKR 357 Query: 356 K 356 + Sbjct: 358 R 358 >gi|251771422|gb|EES52001.1| permease YjgP/YjgQ family protein [Leptospirillum ferrodiazotrophum] Length = 361 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 48/354 (13%), Positives = 117/354 (33%), Gaps = 7/354 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK +I+ + + +S + + I VI +++I + +++ + + V Sbjct: 1 MKILTRHIMGEYIKIYFLSLVSLEAIYLVIDSVEKIKSFLAHHAPWSLMGEFFAWRSIEV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 V P + T L ++N E+ I G S P++ LLS+ + Sbjct: 61 GFRVIPMSALLATILALGIASKNHEITAIRAAGISLGKATFPIVLFGALLSLIELLLNLW 120 Query: 121 IEPKCRSTIKQLSAKA--QLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 + P T + + Q + + N++FR +I+K T + Sbjct: 121 VVPHAYQTTDVIMEERINQGSGWSGEVRRNVWFRHGSREIFRIAKIEQGGTRLDTVTIYH 180 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + + ++ ++ + + +DG +S F + + + Sbjct: 181 KSPKADLQWTIEAKTLLYENGGWVFHDGVRTLFHKD-GTLSSESFATLPFPLDRRPADFF 239 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKR-LTQWLFPVIFGLISIVAADKRA 297 + K + +L++ + L + L + L +I Sbjct: 240 IRKTHLSHLTYAELSRTIDLLKANGLPHKNFTVLRDGVLAFPAASFLMVLFAIPFGI--R 297 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 RQ ++L +S +W + + + P+L + + + + Sbjct: 298 EGRQVGIARGFGVALMLSLS-YWTLYSMGLALGRGGVIPPLLAAWFANLVVLAV 350 >gi|283954397|ref|ZP_06371917.1| hypothetical protein C414_000220013 [Campylobacter jejuni subsp. jejuni 414] gi|283794014|gb|EFC32763.1| hypothetical protein C414_000220013 [Campylobacter jejuni subsp. jejuni 414] Length = 341 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 61/327 (18%), Positives = 120/327 (36%), Gaps = 20/327 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+L + L + I ++ +Q L SS S LLK+ G+++P + Sbjct: 1 MKLSLRYVLNQFLSTNLSIFFVLFTIVSMVFFIQLAKLTSSIQISFLDLLKLYGFMLPRI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P F + T L +++ E +++ G S + L K L +A L+S + + + Sbjct: 61 LIFTLPISFFISLTLALFRLSKENESIVLFTLGFSPMILAKFFLKIASLISALMLVVALV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV--DS 178 + P ++ + + F + D I I K + + + I + Sbjct: 121 MIPIVF-ELQDNFVNYKSIQVKFNYKTGEFGQKFLDWMIFIEKQD-SGKYENIIMYHPKH 178 Query: 179 RDTQTHKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + ++ A+ + D A LN G+++ S +F + + T+ + Sbjct: 179 KADDKEQLIIAKEAHVQRKDDGFAFSLNQGKMYNFDQGQSIFS-GEFDTLVVNTQFNTDN 237 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 K + N+ N P+ + T LFP+ L ++ Sbjct: 238 LQTKKFYEYW---------NDLNENPQRAREFVIYA----TIALFPLASTLFALCFGLVT 284 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFS 323 + +F ++I FG+ FS Sbjct: 285 YRYEKGYVYLGMFGVIAIYFGLLSSFS 311 >gi|253686793|ref|YP_003015983.1| permease YjgP/YjgQ family protein [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251753371|gb|ACT11447.1| permease YjgP/YjgQ family protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 358 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 53/360 (14%), Positives = 125/360 (34%), Gaps = 9/360 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI + I + + + +V ++ +I+ + ++ V S + +P + Sbjct: 3 GVLDRYIGKTIFTTIMTTLFMLVSLSGIIKFVDQLRKVGQGEYSALGAGLYTLLSVPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L + +EL+++ +G +R+ + V+ AI L + + Sbjct: 63 EIFFPMAALLGALLGLGQLATRSELVVMQASGFTRLQIATAVMKTAIPLVLLTMAIGEWV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + ++ + + L+ + +D +I I + + L G+ I D+ Sbjct: 123 SPQGEQMARNYRSQMISGGSMISTQGGLWAKDGND-FIYIERVAGDKELSGVNIYHFDDS 181 Query: 182 QTHKIY-YAQSGSIDLDRQAIILNDGEVHRKSPISK-DISIMKFKSYTLQTESANSSTIV 239 YA S + DR L+ + S + S + + Sbjct: 182 NKLLSVRYAASAEFEDDRNVWRLSQVDESDLSDGKQIGGSQTLSGEWKTNLTPDKLGVVA 241 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L+ + ++ L N + Y+ ++ + + L+++ + Sbjct: 242 LEPDALSIRGLHN-YAKYLKQSGQESSRYQLNMWSKIFAPVSVAVMMLMAVSFIFGP--L 298 Query: 300 RQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R I I +S F + F + P IL +F S+ LL+ ++ Sbjct: 299 RSVSAGSRIVIGISFGFLFYLLNEIFRPLSLVYGIPPILGAILPSSVFLCISVALLLKRR 358 >gi|226227979|ref|YP_002762085.1| hypothetical protein GAU_2573 [Gemmatimonas aurantiaca T-27] gi|226091170|dbj|BAH39615.1| hypothetical protein [Gemmatimonas aurantiaca T-27] Length = 362 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 60/361 (16%), Positives = 120/361 (33%), Gaps = 16/361 (4%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI R F ++ L + +VI ++ + + + Y IP L M Sbjct: 9 LDRYIATEFTRIFGVTILGFPVLVFVIDLVDNLRKYTERKLPAKAVALSYFYWIPDTLFM 68 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 V P T + + R +E+ +G S I P+L +A L I P Sbjct: 69 VLPAAVLFATVFSIGTFTRYSEITAAKASGISFYRFIAPILVMATLALGLDLAFGEIAPP 128 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS-RDTQ 182 + L + Y F +Y + + + I I D + Sbjct: 129 ANAIRLDLLEGTSSSRANDRYNFA--FASDRGRIYRIYTLNVRDKAVDNIEIEARGSDKK 186 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + A+ + R+ L+ G VH ++D + F +L + + L+ Sbjct: 187 PGMVVAARRAKWNDARRDWRLDSGVVHIIPDRTRD---IAFSFDSLIDRDFHETPAELRT 243 Query: 243 NDQNLSFLLNPNPNN----PNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 +++ S + + + T + E R+ + PV +I++ A Sbjct: 244 TERDPSEMRFADLTRFITVLERSGADVNTLKVE---RMLKIAIPVTCLIIALFGAPLATS 300 Query: 299 VRQRKKIHPIFISLS---ISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 ++ + I +SL+ + + I K P + + + +I LL Sbjct: 301 SQRGGAAYGIAVSLATTVLFLLLIQLTKAIGGKGIVEPELAAWIPNAVVGLFAIVLLSRV 360 Query: 356 K 356 + Sbjct: 361 R 361 >gi|237710072|ref|ZP_04540553.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|229456165|gb|EEO61886.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] Length = 365 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 53/346 (15%), Positives = 130/346 (37%), Gaps = 10/346 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPTV 60 K ++YI++ ++ + I+ IA V + + I+ ++ L I+ IP Sbjct: 8 KRLDIYIIKKFLGTYFFAIALIISIAVVFDVNENIDRFINNKAPLKAIVFDYYMNFIPYF 67 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +P + + + N+E++ + +TG S +++P + A ++S+ F Sbjct: 68 SNLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMMRPYMISAAIISVVTFGLGAY 127 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + PK T + + Y+ N+ +D + I +Y N F +D D Sbjct: 128 VIPKGNVTRLDFEDRYKKKKKQEYVR-NVQLEVDSGVIAYIERYENYNKTGYRFSLDKFD 186 Query: 181 TQTHKIY-YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + A+S + D + R+ ++ I + + ++ Sbjct: 187 DKKLVAHLTARSVTYDTASVHKWTIKNYMIREMEGMRE-KITRGDRLDTIIKMEPQDFLI 245 Query: 240 LKANDQNLS--FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +K Q ++ L ++ + E+++R+ I I + + ++ Sbjct: 246 MKGQQQTMTSPELKEYIDKQKRRGFANIKEFEIEYYQRIAMSFAAFILTTIGVSLSSRKM 305 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 + + + L++SF + F + N PI+ +++ Sbjct: 306 ---KGGMGLHLGVGLALSFS-YILFQTVSATFAVNGNTPPIIAVWI 347 >gi|323496139|ref|ZP_08101199.1| lipopolysaccharide ABC transporter permease [Vibrio sinaloensis DSM 21326] gi|323318883|gb|EGA71834.1| lipopolysaccharide ABC transporter permease [Vibrio sinaloensis DSM 21326] Length = 356 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 58/360 (16%), Positives = 140/360 (38%), Gaps = 13/360 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +LYI R I + M ++ ++ +I+ ++++ V + L +P + Sbjct: 3 KILDLYIGRTIIATTTMVLATLIGLSGIIRFVEQLRSVGRGSYDLLHAFYFVVLGVPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M + L + ++EL+++ +G S++ + VL A+ L + + + Sbjct: 63 EMFFAMSALLGALIGLGMLASSSELVVMQASGYSKLDIGISVLKTAVPLMLIIMLLGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQ-GIFIVDSRD 180 P+ + ++L + + + ++ R DD +I I K +N ++ D D Sbjct: 123 APQAQKMARELRSFSISGGQIVSVRAGVWARDADD-FIFIGKVEDDNLYGLKVWRFDE-D 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + +++ +A + Q +L D ++ + +++ + Y T V+ Sbjct: 181 KKLYQVLFAPEADYQGNNQ-WLLKDTQITDMADRV-ELAKSTVREYNWHTTLVPDKLAVV 238 Query: 241 K--ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADKR 296 K + +S L + + Y +++TQ + L++ V R Sbjct: 239 KVEPEELAMSGLYD-YVTYLKESEQDSSRYELALWRKVTQPFSIAVMMLMALSFVFGPLR 297 Query: 297 ALVRQRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 ++ + + + + F+G +++ I P + I+ +F +I LL K Sbjct: 298 SVSMGARILSGVVAGFTFYISSEFFGPLTLVYGIP--PVFGAIMPSIVFLTIAILLLRRK 355 >gi|57167826|ref|ZP_00366966.1| conserved hypothetical integral membrane protein, putative [Campylobacter coli RM2228] gi|57020948|gb|EAL57612.1| conserved hypothetical integral membrane protein, putative [Campylobacter coli RM2228] Length = 341 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 66/361 (18%), Positives = 128/361 (35%), Gaps = 23/361 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+L + L + I ++ +Q L SS + LLK+ G+++P + Sbjct: 1 MKLALRYVLNQFLSTNLSIFFVLFTIVSMVFFIQLAKLTSSIEINFADLLKLYGFMLPRI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P F + T L ++R E +++ G S L K L +A L+S + I + Sbjct: 61 LIFTLPIAFFIALTLALFRLSRENESIVLFTLGFSPKILAKFFLKIAALVSALMLIIALV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P ++ + + F + + I I K + I R+ Sbjct: 121 MIPIVF-ELQDNFVNFKKTQVKFNYKTGEFGQRFLEWMIFIEKQESDRYENIIMYHPKRN 179 Query: 181 -TQTHKIYYAQSGSIDLDRQ--AIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 ++ A+ + + A L++G+++ + + I F + T+ + + Sbjct: 180 IEDKEQLIIAKEATAQRNEDSFAFKLSNGKMYNFE-NGQTLFIGNFDKLIVNTQFNDQNL 238 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 K + N+ N P+ + + T LFP+ L ++ Sbjct: 239 QTKKFYEYW---------NDLNTNPKRAKEFVIYV----TIALFPLASTLFALSFGIVTY 285 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + +F +++ FG+ FS I I L F MI + Sbjct: 286 RYEKGFIYFGMFGVIAVYFGLLSSFSQPPILAC-----IGIFALSFIASIVCFKKMILSR 340 Query: 358 Y 358 Y Sbjct: 341 Y 341 >gi|323166626|gb|EFZ52385.1| hypothetical protein SS53G_3092 [Shigella sonnei 53G] Length = 360 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 53/361 (14%), Positives = 126/361 (34%), Gaps = 11/361 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + + I++ ++ + + + L + +P Sbjct: 5 GVLDRYIGKTI---FTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVP 61 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L + + +EL+++ +G +R+ + V+ AI L + Sbjct: 62 KDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIG 121 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-D 177 + + + A+A + ++ L+ + ++ ++ I + + L GI I Sbjct: 122 EWVASQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNN-FVYIERVKGDEELGGISIYAF 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + + YA + D + + L+ E +P S ++ Sbjct: 181 NENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + ++S L N + Y+ ++ Q L + L+++ Sbjct: 241 VVALDPDALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 IS F V F + P +L F + S++LLM K Sbjct: 300 LRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRK 359 Query: 356 K 356 Sbjct: 360 S 360 >gi|228472720|ref|ZP_04057478.1| permease YjgP/YjgQ family protein [Capnocytophaga gingivalis ATCC 33624] gi|228275771|gb|EEK14537.1| permease YjgP/YjgQ family protein [Capnocytophaga gingivalis ATCC 33624] Length = 359 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 53/370 (14%), Positives = 134/370 (36%), Gaps = 24/370 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL+ ++ L + I ++ ++ ++ + ++K + Sbjct: 1 MKIIDRYILKRYFLTYSALFLMFIPIGILVDYAEKNQKMTDNHAPTEAIIKYYANFVVHF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + + + TE++ + ++G S ++P + A +LS+F+ + Sbjct: 61 ANILFPIFLFLSVIWFTSKLAEKTEIVAMLSSGISYNRFLRPYFYGATILSVFVLLMGMF 120 Query: 121 IEPKCRSTIKQLS-AKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P + L L+ +++ + YI +S ++ N F+++ Sbjct: 121 VVPYSSGVYNEFYGTYLSKDLYSKGSR--LYNQVNKNEYIYVSSFDANTNQGANFVLERF 178 Query: 180 DT-QTHKIYYAQSGSIDLDR--QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 D + A S + + L + + + + K L ++ + Sbjct: 179 DGLRMTDKITANSIEWVQNDSVKTYRLYNYTHRKVGDWNDIYEKVYQKDTLLNFKTTDLL 238 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 I A +N L + Y +++R I +I + Sbjct: 239 PIEYAAETKNFFELNKFIAEERQKGSPNIRIYELVYYRRWAAIFNVFILTIIGVAV---- 294 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYI---------IHKIEQNPYYIPILYLFLFCIS 347 + V++R + ++++FGV GFSY+ K P I+ +F + Sbjct: 295 SSVKKRG-----GMGVNLAFGVLIGFSYVFFERIFGIMAEKSGITPLMAVIIPNAMFALL 349 Query: 348 SIFLLMIKKK 357 +++++ ++ Sbjct: 350 AVYMIRKSRR 359 >gi|188532529|ref|YP_001906326.1| Inner membrane protein [Erwinia tasmaniensis Et1/99] gi|188027571|emb|CAO95418.1| Inner membrane protein [Erwinia tasmaniensis Et1/99] Length = 358 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 49/361 (13%), Positives = 127/361 (35%), Gaps = 11/361 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + I++ ++ + + + +L + +P Sbjct: 3 GVLDRYIGKTI---FNTIMATLFMLVSLSGIIKFVDQLRKTGQGEYTVLGAGLYTLLSVP 59 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L ++ + +EL+++ +G +R+ + V+ AI L + Sbjct: 60 KDIEIFFPMAALLGALLGLGALAQRSELVVMQASGFTRMQIAASVMKTAIPLVLLTMAIG 119 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 + P+ + A+ + + + L+ + D+ ++ I + ++ L GI I Sbjct: 120 EFVAPQGEQMARNFRAQQLVGGSLLSTQSGLWAKDGDN-FVFIERIRDDSQLSGISIYSF 178 Query: 179 R-DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-DISIMKFKSYTLQTESANSS 236 D + + YA S + D++ L + + + S + Sbjct: 179 DHDRRLQTVRYAASAKYNADKKLWELAQVDQSDLTDAQQIKGSQTLSGEWKTTLTPDKLG 238 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L ++S L + + ++ Y+ ++ Q L + L+++ Sbjct: 239 VVALDPGALSISGLYSYSK-YLQQSGQMAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGP 297 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-PYYIPILYLFLFCISSIFLLMIK 355 IS F V + + P +L F + S+ +L+ + Sbjct: 298 LRSVSMGMRVITGISFGFLFYVLDQIFGPLSLVYNIPPVLGALLPSAAFFVLSVAMLIKR 357 Query: 356 K 356 + Sbjct: 358 R 358 >gi|215488305|ref|YP_002330736.1| predicted permease [Escherichia coli O127:H6 str. E2348/69] gi|215266377|emb|CAS10814.1| predicted permease [Escherichia coli O127:H6 str. E2348/69] Length = 359 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 58/364 (15%), Positives = 127/364 (34%), Gaps = 22/364 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N + I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVDVEIFHYRD 180 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK--------FKSYTLQTE 231 YA+S +I+ D+ IL+ G H+K K+ F S L+ Sbjct: 181 DLSLESYIYARSATIEDDKT-WILH-GVNHKKWLNGKETQETSDYLAWQSTFTSMNLEEL 238 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S +T ++ + + +L + YR ++L Q + + L+++ Sbjct: 239 SMPGNTFSVRQLNHYIHYL--------QETGQPSSEYRLALWEKLGQPILTLAMILLAVP 290 Query: 292 A-ADKRALVRQRKKIH-PIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-FLFCISS 348 R ++ + + L + + P L + F+ S Sbjct: 291 FTFSAPRSPRMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALS 350 Query: 349 IFLL 352 + Sbjct: 351 LVYW 354 >gi|297170682|gb|ADI21706.1| hypothetical protein [uncultured Verrucomicrobiales bacterium HF0130_14P10] Length = 392 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 53/400 (13%), Positives = 113/400 (28%), Gaps = 52/400 (13%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + + YIL + F +S + + + + + +L+P+ Sbjct: 1 MSTLDRYILAEWLKVFGVSLIVLTGLLVLQDAADHAEDFRQGFAGAGEVATYYAWLVPSY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP + P + T V+ ++ RN E+ ++ G + + L + +L A+LLS + Sbjct: 61 LPWLLPIALFVSTLFVVATLRRNNEIAVLRACGVNVLRLSRSLLVTALLLSALSYGLNAK 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLD--DDLYIKISKYNPNNTLQGIFIVDS 178 P + L + N + + + ++ G+ + Sbjct: 121 WSPLAMEKSQGLLEVLRGKSDHRNFVSNFDMSPPKTNRRWFFRKFFAVTSSGAGVHLYSR 180 Query: 179 RDTQTHKI-YYAQSGSIDLDRQAIILN------------------------DGEVHRKSP 213 A+ D D LN + E + Sbjct: 181 TTGGRDSFRIRAEKAFRDEDGCWRFLNGRFIGFAGPRGLPVPSESGEGLVWEAEFAEQDS 240 Query: 214 ISKDISIM-----KFKSYTLQTESANSSTI---VLKANDQNLSFL---LNPNPNNPNYRP 262 S S + +F S L + K ++ ++ L ++ + Sbjct: 241 SSDGFSSVPILNKQFSSLRLPDVREDPEPFLLMRKKPSELSVRELKTIVDASEVTEGNAA 300 Query: 263 ELLETYRSEFHKRLTQWLFPVIFGL-ISIVAADKRALVRQRKKIHPIFISLSISFGVFWG 321 R H + L I + +L + G + Sbjct: 301 VRPYAIRM-GHAFWASPGCLLAVALGIPFALVGNGRSA-----AAGVARALGLCVGYYVA 354 Query: 322 FSYIIHKIEQNPYYIPILY-----LFLFCISSIFLLMIKK 356 + E IPI + + L I +++ L + Sbjct: 355 RTMGDSLGE--AGIIPIEWAAGVPVLLLGIVAVWFLWRVR 392 >gi|261345121|ref|ZP_05972765.1| membrane protein, YjgP/YjgQ family [Providencia rustigianii DSM 4541] gi|282566809|gb|EFB72344.1| membrane protein, YjgP/YjgQ family [Providencia rustigianii DSM 4541] Length = 358 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 58/365 (15%), Positives = 139/365 (38%), Gaps = 19/365 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI R I S LM+ +V ++ +I+ ++++ V + + +P + Sbjct: 3 GVLDRYIGRTILNSILMALFLLVSLSGIIKFVEQLRKVGDGDYTAMSAGVFTLLTVPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + + L ++ +EL+++ +G +R+ + V+ AI L I + + Sbjct: 63 DIFFPMAALLGSLLGLGALASRSELVVMQASGFTRLQIAMSVMKTAIPLVIVAMLIGEWV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + A+ + + + ++ + D +I I N +Q + I D Sbjct: 123 APAGDQWARNYRAEKIVGNSLVATDSGMWAKDAHD-FIYIQSIKDANNIQDVSIYRFDDQ 181 Query: 182 QT-HKIYYAQSGSIDLDRQAIILNDG-----EVHRKSPISKDIS---IMKFKSYTLQTES 232 + + +A G+ D +++ +L+ +K S+ ++ L S Sbjct: 182 RKLKSVMFAARGTYDANKKLWVLSQVDESILSSQQKITGSQRLTYEWQTNLTPEKLGIVS 241 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 ++ ++ ++ Q +++L +L Y+ +++ L + L+++ Sbjct: 242 LHADSLSIRGLYQYITYL--------KESGQLASVYQLSMWQKILAPLSAAVMMLMAVSF 293 Query: 293 ADKR-ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 V ++ + + + + GF P L LF SIFL Sbjct: 294 IFGPLRTVPMGVRVVSGIVGGFLFYILNQGFGNWSLVYSIPPVIAAALPSVLFLGVSIFL 353 Query: 352 LMIKK 356 L+ +K Sbjct: 354 LVKRK 358 >gi|74314741|ref|YP_313160.1| hypothetical protein SSON_4447 [Shigella sonnei Ss046] gi|73858218|gb|AAZ90925.1| conserved hypothetical protein [Shigella sonnei Ss046] Length = 361 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 53/361 (14%), Positives = 126/361 (34%), Gaps = 11/361 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + + I++ ++ + + + L + +P Sbjct: 6 GVLDRYIGKTI---FTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVP 62 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L + + +EL+++ +G +R+ + V+ AI L + Sbjct: 63 KDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIG 122 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-D 177 + + + A+A + ++ L+ + ++ ++ I + + L GI I Sbjct: 123 EWVASQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNN-FVYIERVKGDEELGGISIYAF 181 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + + YA + D + + L+ E +P S ++ Sbjct: 182 NENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLG 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + ++S L N + Y+ ++ Q L + L+++ Sbjct: 242 VVALDPDALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGP 300 Query: 297 ALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 IS F V F + P +L F + S++LLM K Sbjct: 301 LRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRK 360 Query: 356 K 356 Sbjct: 361 S 361 >gi|312170935|emb|CBX79194.1| beta-lactamase/D-alanine carboxypeptidase ampH [Erwinia amylovora ATCC BAA-2158] Length = 358 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 50/361 (13%), Positives = 126/361 (34%), Gaps = 11/361 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + I++ ++ + + + +L + +P Sbjct: 3 GVLDRYIGKTI---FNTIMATLFMLVSLSGIIKFVDQLRKTGQGEYTVLGAGLYTLLSVP 59 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L ++ + +EL+++ +G +R+ + V+ AI L + Sbjct: 60 KDIEIFFPMAALLGALLGLGTLAQRSELVVMQASGFTRMQIAASVMKTAIPLVLLTMAIG 119 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI-VD 177 + P+ + A+ + + + L+ + D+ +I I + +N L GI I Sbjct: 120 EFVAPQGEQMARNYRAQQLMGGSLLSTQSGLWAKDGDN-FIFIERVRDDNQLSGISIYHF 178 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-DISIMKFKSYTLQTESANSS 236 + + YA S + D++ L + S + + + + Sbjct: 179 DPQRRLKTVRYAASAKYNADKKLWELAQVDQSDLSDTQQINGNQTLSGEWKTSLTPDKLG 238 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L ++S L + + ++ Y+ ++ Q L + L+++ Sbjct: 239 VVSLDPGALSISGLYSYSK-YLKQSGQMAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGP 297 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-PYYIPILYLFLFCISSIFLLMIK 355 IS F V + + P +L F S+ +L+ + Sbjct: 298 LRSVSMGMRVVTGISFGFLFYVLDQIFGPLSLVYNIPPILGALLPSAAFFALSVAMLVKR 357 Query: 356 K 356 + Sbjct: 358 R 358 >gi|332520665|ref|ZP_08397127.1| permease YjgP/YjgQ family protein [Lacinutrix algicola 5H-3-7-4] gi|332044018|gb|EGI80213.1| permease YjgP/YjgQ family protein [Lacinutrix algicola 5H-3-7-4] Length = 540 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 50/272 (18%), Positives = 102/272 (37%), Gaps = 17/272 (6%) Query: 25 FIAWVIQILQR-INLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRN 83 + +V+Q + I ++ ++K Y+ PT++P++ P + + V + N Sbjct: 1 MLIFVLQAIWLYIKELAGKDLDPATIVKFLFYITPTLIPLILPLTILLASIMVFGNFAEN 60 Query: 84 TELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFS 143 E + +TG S + + + LSI F N + P L Sbjct: 61 YEFAAMKSTGISLQRAMSGLSVFIVALSITTFFFSNNVIPWAEYNSFNLRKNIAKVKPAM 120 Query: 144 YLEENLFFRLDDDLYIKISKYNPNNT--LQGIFIV--DSRDTQTHKIYYAQSGSIDLDRQ 199 + E F ++ + IK+SK + L+ + I K A++G + + Sbjct: 121 AIAEGQFNQIGEGFNIKVSKKTGDRGQFLEKVVIHQGQKSKPGNFKTIIAENGELVSAEK 180 Query: 200 A----IILNDGEVHRKSPIS-------KDISIMKFKSYTLQTESANSSTIVLKANDQNLS 248 + +IL +G + +P K + F YT+ + + + + L + Sbjct: 181 SDILKLILFNGYYYDDTPPKDYKERLRKPFAKSIFDKYTMNIDLSQLNAVDLDDKSTDNK 240 Query: 249 FLLNPNPNNPNYRPELLETYRSEFHKRLTQWL 280 + + N + NY + L T R E ++ L Sbjct: 241 YSML-NISQLNYTTDSLHTERQEVYELFATNL 271 Score = 43.0 bits (100), Expect = 0.075, Method: Composition-based stats. Identities = 14/104 (13%), Positives = 38/104 (36%), Gaps = 4/104 (3%) Query: 246 NLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKI 305 + + ++ N + L + H++ L +I V A AL+R+ Sbjct: 318 STTQIIQSKEANLKTKSNWLNRHIIALHEKFALALACIILF---FVGAPLGALIRKGGLG 374 Query: 306 HPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 P+ I++ + + + + ++ + P L + + + Sbjct: 375 LPMVIAIVLFLTYHFIGIFAKNSA-KDGTFNPALATWFSTLIML 417 >gi|305432149|ref|ZP_07401315.1| conserved hypothetical integral membrane protein [Campylobacter coli JV20] gi|304444814|gb|EFM37461.1| conserved hypothetical integral membrane protein [Campylobacter coli JV20] Length = 341 Score = 95.0 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 66/361 (18%), Positives = 128/361 (35%), Gaps = 23/361 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+L + L + I ++ +Q L SS + LLK+ G+++P + Sbjct: 1 MKLALRYVLNQFLSTNLSIFFVLFTIVSMVFFIQLAKLTSSIEINFVDLLKLYGFMLPRI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P F + T L ++R E +++ G S L K L +A L+S + I + Sbjct: 61 LIFTLPIAFFIALTLALFRLSRENESIVLFTLGFSPKILAKFFLKIAALVSALMLIIALV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P ++ + + F + + I I K + I R+ Sbjct: 121 MIPIVF-ELQDNFVNFKKTQVKFNYKTGEFGQRFLEWMIFIEKQESDRYENIIMYHPKRN 179 Query: 181 -TQTHKIYYAQSGSIDLDRQ--AIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 ++ A+ + + A L++G+++ + + I F + T+ + + Sbjct: 180 IEDKEQLIIAKEATAQRNEDSFAFKLSNGKMYNFE-NGQTLFIGNFDKLIVNTQFNDQNL 238 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 K + N+ N P+ + + T LFP+ L ++ Sbjct: 239 QTKKFYEYW---------NDLNTNPKRAKEFVIYV----TIALFPLASTLFALSFGIVTY 285 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + +F +++ FG+ FS I I L F MI + Sbjct: 286 RYEKGFIYFGMFGVIAVYFGLLSSFSQPPILAC-----IGIFALSFIASIVCFKKMILSR 340 Query: 358 Y 358 Y Sbjct: 341 Y 341 >gi|259907067|ref|YP_002647423.1| Inner membrane protein [Erwinia pyrifoliae Ep1/96] gi|224962689|emb|CAX54144.1| Inner membrane protein [Erwinia pyrifoliae Ep1/96] gi|283476867|emb|CAY72716.1| beta-lactamase/D-alanine carboxypeptidase ampH [Erwinia pyrifoliae DSM 12163] Length = 358 Score = 95.0 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 54/362 (14%), Positives = 125/362 (34%), Gaps = 11/362 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + I++ ++ + + + +L + +P Sbjct: 3 GVLDRYIGKTI---FNTIMATLFMLVSLSGIIKFVDQLRKTGQGEYTVLGAGLYTLLSVP 59 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L ++ + +EL+++ +G +R+ + V+ AI L + Sbjct: 60 KDIEIFFPMAALLGALLGLGALAQRSELVVMQASGFTRMQIAASVMKTAIPLVLLTMAIG 119 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 + P+ + A+ + + + L+ + D+ +I I + N L GI I + Sbjct: 120 EFVAPQGEQMARNYRAQQLMGGSLLSTQSGLWAKDGDN-FIFIERIRDGNQLSGISIYNF 178 Query: 179 RDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRKSPISK-DISIMKFKSYTLQTESANSS 236 + K YA S + D++ L + S + S + Sbjct: 179 DHERRLKTVRYAASAKYNADKKLWELAQVDQSDLSDAQQIKGSQTLSGEWNTTLTPDKLG 238 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L ++S L + + ++ Y+ ++ Q L + L+++ Sbjct: 239 VVALDPGALSISGLYSYSK-YLKQSGQMAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGP 297 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 IS F V + + P + L L +I L M+ K Sbjct: 298 LRSVSMGMRVVTGISFGFLFYVLDQIFGPLSLVYNIPPILGAL-LPSAAFFAISLAMLVK 356 Query: 357 KY 358 + Sbjct: 357 RR 358 >gi|148546263|ref|YP_001266365.1| permease YjgP/YjgQ family protein [Pseudomonas putida F1] gi|148510321|gb|ABQ77181.1| permease YjgP/YjgQ family protein [Pseudomonas putida F1] Length = 353 Score = 95.0 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 49/361 (13%), Positives = 131/361 (36%), Gaps = 14/361 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + + L I+ +A + + + + S T ++ P Sbjct: 1 MAKLDRYIGQSVLLAILAVLGIILGLASLFAFIDEMGDL-SDTYTVLEAGNFVLLTAPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L S+ ++EL I+ G S ++ V+ ++L + + Sbjct: 60 LYEMLPMAALIGCLIGLGSLASSSELTIMRAAGVSIGRIVWAVMKPMLVLMLVGLLIGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF-IVDSR 179 + P + + + AQ + ++ R ++ Y+ I+ P+ L G+ Sbjct: 120 VAPVTENKAQADRSLAQGGGEAQSSKRGMWHRQGEE-YVHINAVQPDGLLLGVTRYRFDS 178 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + +A+ D +L D ++ + + + +T++ Sbjct: 179 ERKIVTSSFARRAQYQNDH--WLLADVRTTYFRGDHTEVVNAPEERWDVSLTPELLNTVI 236 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWL--FPVIFGLISIVAADKRA 297 L +++ L + + + + Y F ++ Q + ++ IS + R+ Sbjct: 237 LAPESLSITGLWD-YIHYLSDQGLNNSRYWLAFWTKVLQPMVTAALVLMAISFIFGPLRS 295 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY-LFLFCISSIFLLMIKK 356 + ++ +F + + F G ++ Q + P+L + I ++ + + + Sbjct: 296 VTLGQR----VFTGVLVGFVFRIGQD-LLGPSSQVFGFPPLLAVVIPAGICALAGVWLLR 350 Query: 357 K 357 + Sbjct: 351 R 351 >gi|319789792|ref|YP_004151425.1| permease YjgP/YjgQ family protein [Thermovibrio ammonificans HB-1] gi|317114294|gb|ADU96784.1| permease YjgP/YjgQ family protein [Thermovibrio ammonificans HB-1] Length = 354 Score = 95.0 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 113/355 (31%), Gaps = 10/355 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K + Y+ + F ++ + + VI + N+VS S +P Sbjct: 2 IKKLDRYVFSEGVKFFFLTLTTFLTLFAVIDFVSHFNMVSKVGASGAA--AYILGRLPLY 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 V P + T L+ + +EL + G S P++ L +L S+ + Sbjct: 60 GVRVIPIATLIATMVTLSRFSETSELTVARALGISTYRFSAPLVILGVLASVASVAVQET 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLE-ENL-FFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 + P +++ KA +T + + F D N + + I+ Sbjct: 120 LLPAGLKRATEIALKAGEEVTNGPQKVPGVWFKDRAGDFVFFWELLPKNKRAERVSIIKV 179 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 +D A+ + ++ K++ + ++ + + + Sbjct: 180 KDFSPTGRIDAEEAIYKGGGRWLL-----REVFVRDFKELKSTEKETLPINLGVSVKELL 234 Query: 239 VLKANDQNLSFL-LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + N + + L L + R E + +L L PVI +I I Sbjct: 235 LSVNNPEAMGLLELFLTIKRLSKLNYDTNYLRVELYSKLALGLLPVITAIIGIPFGVYNP 294 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 ++ + I + + F + P Y L LF +FLL Sbjct: 295 RNKKGYTVLLAAIIVVSMWITVSLFLSLGKSEVLPPLYAAFAPLLLFGAVGLFLL 349 >gi|319779266|ref|YP_004130179.1| hypothetical protein TEQUI_1112 [Taylorella equigenitalis MCE9] gi|317109290|gb|ADU92036.1| hypothetical protein TEQUI_1112 [Taylorella equigenitalis MCE9] Length = 372 Score = 95.0 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 51/278 (18%), Positives = 106/278 (38%), Gaps = 10/278 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ ++ I + + ++ + + + + + +S +++L IS + T Sbjct: 1 MILFKRSVVSEILNNAGVVFSTLLIVWLSVLLARLLAQAASGIIGPDLVLGISAFSSITA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP++ + ++ R E+ + TG S + IKPVL +AI +S+ + I + Sbjct: 61 LPIILIVSLFISIITTVSRNYREQEMYVWFTTGVSLVDWIKPVLRIAIPVSVVIAILTIV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN--TLQGIFIVDS 178 P I++ + FS + + F D + + + NN IF + Sbjct: 121 TSPWAYLQIEEYRQRYAQRSDFSKIVQGQFLETDAGARVFFIEPSENNNHEFGKIFAREV 180 Query: 179 RDTQTHKIYYAQSG----SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + + I A G + + + I L G + + + KF S T+ N Sbjct: 181 TE-EWISILNADYGDFKTNFETGERYIELGSGTRYDIRIGTPEFRASKFSSVTMNINQKN 239 Query: 235 S---STIVLKANDQNLSFLLNPNPNNPNYRPELLETYR 269 S I +A ++ + + N R + +R Sbjct: 240 SYTEEQIRTRALEKIKARPFTQLIKDNNSRSDSQILWR 277 >gi|302345342|ref|YP_003813695.1| permease, YjgP/YjgQ family [Prevotella melaninogenica ATCC 25845] gi|302149873|gb|ADK96135.1| permease, YjgP/YjgQ family [Prevotella melaninogenica ATCC 25845] Length = 405 Score = 95.0 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 53/361 (14%), Positives = 128/361 (35%), Gaps = 16/361 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 + + YI++ +++ + L I+ IA V + ++ + I+ +P Sbjct: 45 IGILDWYIIKKFIGTYIYAILLIISIAIVFDFNENLSKFTQYHAPWRAIIFDYYANFVPY 104 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + G S L++P + IL++ F + Sbjct: 105 YSNLFSPLFVFIAVIFFTSKLAGNSEIISMMAAGMSIRRLMRPYMISCILIAGLTFYLNS 164 Query: 120 IIEPKC---RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFI 175 + P R + L ++ + ++ LF + + I Y+ G + Sbjct: 165 FVIPHGTVIRQNFESLYRNSKKNTSAENVQ--LF--VAKNTTAYIQHYDDQYKRGYGFSL 220 Query: 176 VDSRDTQTHKIYYAQS---GSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 V +++ + A ++ + +++ ++ + + I K L E Sbjct: 221 VKTKNKKIVSHMTAMEIQYDTVADTKYHWKVSNWKIRTLKGLKEHIQSGASKDTVLLMEP 280 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + + LLN + + Y EFHKR+ I +I + Sbjct: 281 TDLVYSKGQQETFTSPELLNYISKQTSRGSGNVVQYEVEFHKRIAMSFSSFILTIIGLSL 340 Query: 293 ADKRALVRQRKKIHPIFISLSISFG-VFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + ++ R+ + I L++SFG + I+ + I ++ + I Sbjct: 341 SSRK---RKGGMGLYLGIGLALSFGYIMLQTVSATFAIKDDTPPILAAWIPNIIFAIIAY 397 Query: 352 L 352 Sbjct: 398 F 398 >gi|218131075|ref|ZP_03459879.1| hypothetical protein BACEGG_02679 [Bacteroides eggerthii DSM 20697] gi|217986779|gb|EEC53112.1| hypothetical protein BACEGG_02679 [Bacteroides eggerthii DSM 20697] Length = 380 Score = 95.0 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 55/369 (14%), Positives = 132/369 (35%), Gaps = 19/369 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 +K + YI++ +++ + I+ IA V ++++ S I+ IP Sbjct: 22 LKRLDWYIIKKFLGTYVFAIALIISIAVVFDFNEKMDRFMSHEAPWEAIIFDYYMNFIPY 81 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + +TG S +++P + A ++++ F + Sbjct: 82 FANLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMLRPYMVSAAIIAVTTFCLGS 141 Query: 120 IIEPKC---RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + PK R + K + + T ++ +D + I ++ + F + Sbjct: 142 YVIPKGSVTRLNFEDKYYKPRKSTTARNIQ----LEVDSGVIAYIERFEDYSKTGYRFSL 197 Query: 177 DS-RDTQTHKIYYAQSGSIDLDRQA-IILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 D +D Q A+S + D + D + + + SI+K + Sbjct: 198 DKFKDKQLVSHLTARSITYDTATVHKWTVKDYMIREMDGMRE--SIVKGEKMDTILFMEP 255 Query: 235 SSTIVLKANDQNLS--FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + +++K + L+ L ++ + E+HKR+ I LI + Sbjct: 256 ADFLIMKNQQEMLTSPQLSEYINRQRQRGFANIKEFEIEYHKRIAMSFASFILTLIGVSL 315 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF-LFCISSIFL 351 + + + + + F I N P + ++ + + Sbjct: 316 ----SSKKTKGGMGLHLGIGLGLSFSYILFQTIASTFAVNGNVPPFIAVWIPNLLYAFIA 371 Query: 352 LMIKKKYTK 360 + KK K Sbjct: 372 FYLYKKAPK 380 >gi|307310386|ref|ZP_07590034.1| permease YjgP/YjgQ family protein [Escherichia coli W] gi|306909281|gb|EFN39776.1| permease YjgP/YjgQ family protein [Escherichia coli W] gi|315062298|gb|ADT76625.1| permease YjgP/YjgQ family protein [Escherichia coli W] gi|323377117|gb|ADX49385.1| permease YjgP/YjgQ family protein [Escherichia coli KO11] Length = 359 Score = 95.0 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 59/366 (16%), Positives = 130/366 (35%), Gaps = 26/366 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VSS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSSGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK--------FKSYTLQTE 231 YA+S +I D+ IL+ G H+K K+ F S L Sbjct: 181 DLSLESYIYARSATIKDDKT-WILH-GVNHKKWLNGKETLETSDNLAWQSAFTSMDLDEL 238 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S +T ++ + + +L + YR ++L Q + + L+++ Sbjct: 239 SMPGNTFSVRQLNHYIHYL--------QETGQPSSEYRLALWEKLGQPILTLAMILLAVP 290 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-----FLFCI 346 + R + + + + + + +++ P+ L F+ Sbjct: 291 F--TFSAPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVA 348 Query: 347 SSIFLL 352 S+ Sbjct: 349 LSLVYW 354 >gi|317051997|ref|YP_004113113.1| permease YjgP/YjgQ family protein [Desulfurispirillum indicum S5] gi|316947081|gb|ADU66557.1| permease YjgP/YjgQ family protein [Desulfurispirillum indicum S5] Length = 356 Score = 95.0 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 69/369 (18%), Positives = 141/369 (38%), Gaps = 27/369 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M LY R ++ +V + V+ I+ ++ + S + G + Sbjct: 1 MTLL-LYTFRQYLHIIFLAMAVLVALYGVVDIIGNLDDFA--HLSSLQIAYYVGATLLIG 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L +TP + T +T++ N E+ I+ + G S + PVL + F+ Sbjct: 58 LYHLTPAIMLIATVMYITTIGVNNEMKIMLSAGISLKKISLPVLVFVSCAAGAHFLLGEQ 117 Query: 121 ----IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYN-PNNTLQGIF 174 I+P+ +++ A+ Q + + NL+ R D +I ++N NN L G+ Sbjct: 118 VFQHIKPEV-DALQKYEAR-QQRPPSAIIAGNLWVRNYDGTSFARIRRFNMENNLLLGVE 175 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 I R+ + A GS+ R + +++ + + S + + ++F T Sbjct: 176 IYTVREGMIQEYVSADHGSLQEGRIHLEGVVIRNFMTQQVSRLPEH--QVEF------TG 227 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S+ +K ++ S L + Y SE +R++ L ++ L++I Sbjct: 228 IMESTKASIKPLEEYSSRELASDIAILREAGHPSHLYVSELLRRVSYSLAIIVLSLVAIP 287 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN---PYYIPILYLFLFCISS 348 R+ KI + + L ++ F S + + + PY P + +F Sbjct: 288 LGVTGE--RKSGKIFSVTVGLLVAMVYFIVDSLAMTLGKGDAISPYIAPFIANGVFLGLF 345 Query: 349 IFLLMIKKK 357 +FL + Sbjct: 346 VFLYSRHRN 354 >gi|283957186|ref|ZP_06374650.1| hypothetical protein C1336_000800059 [Campylobacter jejuni subsp. jejuni 1336] gi|283791362|gb|EFC30167.1| hypothetical protein C1336_000800059 [Campylobacter jejuni subsp. jejuni 1336] Length = 341 Score = 95.0 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 62/327 (18%), Positives = 121/327 (37%), Gaps = 20/327 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+L + L + I ++ +Q L SS S LLK+ G+++P + Sbjct: 1 MKLSLRYVLNQFLSTNLSIFFVLFAIVSMVFFIQLAKLTSSIEISFLDLLKLYGFMLPRI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P F + T L +++ E +++ G S + L K L +A L+S F+ + + Sbjct: 61 LIFTLPISFFISLTLALFRLSKENESIVLFTLGFSPMILAKFFLKIASLISAFMLVVALV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV--DS 178 + P ++ + + F + D I I K + + + I + Sbjct: 121 MIPIVF-ELQDNFVNYKSTQVKFNYKTGEFGQKFLDWMIFIEKQDSD-KYENIIMYRPKH 178 Query: 179 RDTQTHKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + ++ A+ + D A LN G+++ S +F + + T+ + Sbjct: 179 KTDDKEQLIIAKEAHVQRKDDSFAFSLNQGKMYNFEQGQSIFS-GEFDTLVVNTQFNTDN 237 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 K + N+ N P+ + T LFP+ L ++ Sbjct: 238 LQTKKFYEYW---------NDLNENPQRAREFVIYT----TIALFPLASTLFALCFGLVT 284 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFS 323 + +F ++I FG+ FS Sbjct: 285 YRYEKGYVYLGMFGVIAIYFGLLSSFS 311 >gi|162146455|ref|YP_001600914.1| hypothetical protein GDI_0631 [Gluconacetobacter diazotrophicus PAl 5] gi|209543542|ref|YP_002275771.1| permease YjgP/YjgQ family protein [Gluconacetobacter diazotrophicus PAl 5] gi|161785030|emb|CAP54574.1| putative membrane protein [Gluconacetobacter diazotrophicus PAl 5] gi|209531219|gb|ACI51156.1| permease YjgP/YjgQ family protein [Gluconacetobacter diazotrophicus PAl 5] Length = 357 Score = 95.0 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 63/361 (17%), Positives = 125/361 (34%), Gaps = 16/361 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK F+ YI R+FL+ L + + +++ + ++ V L + L P Sbjct: 1 MKRFDRYIQMVTLRAFLLVALGLTALFSLLEFVDQLAFVGQGHYRLADAAAYTALLGPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 VTP + L + +++EL + G S +I VL L + + + LF+ Sbjct: 61 FMQVTPIAMLLACLLGLGGLAKHSELTALQGIGLSEARIISAVLRLVVPIVMVLFLLAQF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P R ++ A A + T ++ F+ D Y+ + ++ I I Sbjct: 121 VVPGTRQMAQEGRAAALASATQKDDQDQAFWAHGDQQYLSVRRFPSETQADDIDIYRFAA 180 Query: 181 TQTHKIYY-AQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + Y A I D L D KDI +F + L + + ++ Sbjct: 181 DGSMTSYLHAARAQIGADD-VWTLRDVTR-------KDIVADQFHTSQLDSMAWHAFLSS 232 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLE------TYRSEFHKRLTQWLFPVIFGLISIVAA 293 + +L P Y +L Y E R++ + + Sbjct: 233 RQIRFLSLPPESVPPIALYRYIQDLKRHHLPAMRYEQELWARISMPFAMIALIACAAPFV 292 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFW-GFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 + I ++++I F + S + + NP + L +S+ ++ Sbjct: 293 FGPPRSQNVGYRMAIGVAIAIVFSLGQEITSRLGLLFDLNPALTALTPSVLLMMSAAYVF 352 Query: 353 M 353 + Sbjct: 353 I 353 >gi|298529509|ref|ZP_07016912.1| permease YjgP/YjgQ family protein [Desulfonatronospira thiodismutans ASO3-1] gi|298510945|gb|EFI34848.1| permease YjgP/YjgQ family protein [Desulfonatronospira thiodismutans ASO3-1] Length = 355 Score = 95.0 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 50/366 (13%), Positives = 131/366 (35%), Gaps = 19/366 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+LR + + ++ + R+N + + +L+ + +P + Sbjct: 1 MSVLNRYLLRQNLFYTAVLLFSGTMVYLIVDFVGRMNAMVEAGLGALQVLEYFVFKMPLI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P F + + M+R+ EL+ ++++ S + A+++ + LF+ Sbjct: 61 VAQTLPAIFMLGVLIQMAMMHRSNELVAMESSAISFRKPAVFFIGYALVVFMLLFVFSET 120 Query: 121 IEPKCRSTIKQ-LSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDS 178 + + +Q + + E+++ + D D I I + + + Sbjct: 121 LGVRGEQVTRQIWNQDVRDREAAVEGLEDVWVK-DRDYMIHIERAHINEGRGKDFTAYKK 179 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSP-ISKDISIMKFK-SYTLQTESANSS 236 D + ++ ++ + ++L D V + + + M+ + L++ + S Sbjct: 180 SDPGKIQEII-KAPEFEVHKNRLLLRDVTVFKPHSLERQSLQEMEMEVKIDLRSFALVDS 238 Query: 237 TIVLKA-NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + +A + LS L+N + +E + H ++ V+ L+++ Sbjct: 239 DLPYQAWSIFTLSALVNQLKESGAS----VEKISTALHSKIAYPFALVVMTLLALAL--- 291 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIE---QNPYYIPILYLFLFCISSIFLL 352 R + + + L I F + + + + E P+ F I S+ L Sbjct: 292 --FTRIKNIYALVTLGLVIVFFYYTVYVFGVSYAEEGVTAPFVGAWTANVFFGILSLLQL 349 Query: 353 MIKKKY 358 + Sbjct: 350 FWMDRR 355 >gi|26987719|ref|NP_743144.1| permease YjgP/YjgQ family protein [Pseudomonas putida KT2440] gi|24982407|gb|AAN66608.1|AE016288_7 conserved hypothetical protein [Pseudomonas putida KT2440] gi|313497349|gb|ADR58715.1| Permease YjgP/YjgQ family protein [Pseudomonas putida BIRD-1] Length = 353 Score = 95.0 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 49/361 (13%), Positives = 131/361 (36%), Gaps = 14/361 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + + L I+ +A + + + + S T ++ P Sbjct: 1 MAKLDRYIGQSVLLAILAVLGIILGLASLFAFIDEMGDL-SDTYTVMEAGNFVLLTAPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L S+ ++EL I+ G S ++ V+ ++L + + Sbjct: 60 LYEMLPMAALIGCLIGLGSLASSSELTIMRAAGVSIGRIVWAVMKPMLVLMLVGLLIGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF-IVDSR 179 + P + + + AQ + ++ R ++ Y+ I+ P+ L G+ Sbjct: 120 VAPVTENKAQADRSLAQGGGEAQSSKRGMWHRQGEE-YVHINAVQPDGLLLGVTRYRFDS 178 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + +A+ D +L D ++ + + + +T++ Sbjct: 179 ERKIVTSSFARRAQYQNDH--WLLADVRTTYFRGDHTEVVNAPEERWDVSLTPELLNTVI 236 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWL--FPVIFGLISIVAADKRA 297 L +++ L + + + + Y F ++ Q + ++ IS + R+ Sbjct: 237 LAPESLSITGLWD-YIHYLSDQGLNNSRYWLAFWTKVLQPMVTAALVLMAISFIFGPLRS 295 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY-LFLFCISSIFLLMIKK 356 + ++ +F + + F G ++ Q + P+L + I ++ + + + Sbjct: 296 VTLGQR----VFTGVLVGFVFRIGQD-LLGPSSQVFGFPPLLAVVIPAGICALAGVWLLR 350 Query: 357 K 357 + Sbjct: 351 R 351 >gi|57237667|ref|YP_178915.1| hypothetical protein CJE0913 [Campylobacter jejuni RM1221] gi|86152068|ref|ZP_01070280.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 260.94] gi|86153259|ref|ZP_01071463.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni HB93-13] gi|121613133|ref|YP_001000511.1| hypothetical protein CJJ81176_0843 [Campylobacter jejuni subsp. jejuni 81-176] gi|157415093|ref|YP_001482349.1| hypothetical protein C8J_0773 [Campylobacter jejuni subsp. jejuni 81116] gi|167005447|ref|ZP_02271205.1| hypothetical protein Cjejjejuni_04350 [Campylobacter jejuni subsp. jejuni 81-176] gi|315124344|ref|YP_004066348.1| hypothetical protein ICDCCJ07001_795 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|57166471|gb|AAW35250.1| membrane protein, putative [Campylobacter jejuni RM1221] gi|85840853|gb|EAQ58103.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 260.94] gi|85842985|gb|EAQ60196.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni HB93-13] gi|87249473|gb|EAQ72433.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 81-176] gi|157386057|gb|ABV52372.1| hypothetical protein C8J_0773 [Campylobacter jejuni subsp. jejuni 81116] gi|307747735|gb|ADN91005.1| Putative membrane protein [Campylobacter jejuni subsp. jejuni M1] gi|315018066|gb|ADT66159.1| hypothetical protein ICDCCJ07001_795 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315058276|gb|ADT72605.1| Predicted permease YjgP/YjgQ family [Campylobacter jejuni subsp. jejuni S3] gi|315928910|gb|EFV08167.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 305] gi|315931165|gb|EFV10138.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 327] Length = 341 Score = 95.0 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 62/327 (18%), Positives = 121/327 (37%), Gaps = 20/327 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+L + L + I ++ +Q L SS S LLK+ G+++P + Sbjct: 1 MKLSLRYVLNQFLSTNLSIFFVLFAIVSMVFFIQLAKLTSSIEISFLDLLKLYGFMLPRI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P F + T L +++ E +++ G S + L K L +A L+S F+ + + Sbjct: 61 LIFTLPISFFISLTLALFRLSKENESIVLFTLGFSPMILAKFFLKIASLISAFMLVVALV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV--DS 178 + P ++ + + F + D I I K + + + I + Sbjct: 121 MIPIVF-ELQDNFVNYKSTQVKFNYKTGEFGQKFLDWMIFIEKQDSD-KYENIIMYRPKH 178 Query: 179 RDTQTHKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + ++ A+ + D A LN G+++ S +F + + T+ + Sbjct: 179 KADDKEQLIIAKEAHVQRKDDSFAFSLNQGKMYNFEQGQSIFS-GEFDTLVVNTQFNTDN 237 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 K + N+ N P+ + T LFP+ L ++ Sbjct: 238 LQTKKFYEYW---------NDLNENPQRAREFVIYT----TIALFPLASTLFALCFGLVT 284 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFS 323 + +F ++I FG+ FS Sbjct: 285 YRYEKGYVYLGMFGVIAIYFGLLSSFS 311 >gi|78777193|ref|YP_393508.1| permease YjgP/YjgQ [Sulfurimonas denitrificans DSM 1251] gi|78497733|gb|ABB44273.1| permease YjgP/YjgQ [Sulfurimonas denitrificans DSM 1251] Length = 339 Score = 95.0 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 56/358 (15%), Positives = 137/358 (38%), Gaps = 19/358 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI + FL L + IA ++ +++ + ++ + K+ +++P + Sbjct: 1 MKIVQNYIRESVSILFLSIFLPLFSIASIVFLIKLATYTAVIQLTIFEMAKLFFFMLPEL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P F + T L ++ + E++++ G +IK VL A+ L L + + Sbjct: 61 LFYTLPISFFVAITLALFKLSNDNEIVVLFALGIRPKLIIKTVLKPALFLCAILLFNFFV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P ++ + + F+ L + F + + I K N N T + + ++ Sbjct: 121 LFPHAKTLSSNFISYKKSEAKFN-LSASEFGHKFGEWLLYIGKDNQNETYSDVILF-NKK 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + A++ I D + L S + + + F++ + Sbjct: 179 QDEEVLIRAKNAQIINDSGILRLKLTSGEGYSYSDEKFTQINFETMFINDTMKTDLDKYE 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + L P P+ + + ++ LF + F ++SI A +V Sbjct: 239 TPMEYWL-------PEAPSSKKRKML---------ISNILFSL-FPVLSIFLAATIGIVH 281 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 R + I++ + + +++ + + I + + + + +L ++ +I K+ Sbjct: 282 ARHQKGKIYLFMFLGIILYYTLAVTLQLIIGSYALLVLAFGWLLGTYILYKKIIVAKF 339 >gi|50119364|ref|YP_048531.1| putative permease [Pectobacterium atrosepticum SCRI1043] gi|49609890|emb|CAG73325.1| putative permease [Pectobacterium atrosepticum SCRI1043] Length = 358 Score = 95.0 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 52/360 (14%), Positives = 124/360 (34%), Gaps = 9/360 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI + I + + + +V ++ +I+ + ++ V S + +P + Sbjct: 3 GVLDRYIGKTIFTTIMTTLFMLVSLSGIIKFVDQLRKVGQGEYSALGAGLYTLLSVPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L + +EL+++ +G +R+ + V+ AI L + + Sbjct: 63 EIFFPMAALLGALLGLGQLATRSELVVMQASGFTRLQIATAVMKTAIPLVLLTMAIGEWV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + ++ + + L+ + ++ +I I + + L G+ I D Sbjct: 123 SPQGEQMARNYRSQMISGGSMISTQGGLWAKDGNN-FIFIERVTGDKELSGVSIYRFDDQ 181 Query: 182 QTHKIY-YAQSGSIDLDRQAIILNDGEVHRKSPISK-DISIMKFKSYTLQTESANSSTIV 239 YA S + DR L+ + S + S + + Sbjct: 182 NKLLSVRYAASAEFEDDRNVWKLSQVDESDLSDGKQIGGSQTLSGEWKTNLTPDKLGVVA 241 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L+ + ++ L N + Y+ ++ + + L+++ + Sbjct: 242 LEPDALSIRGLHN-YAKYLKQSGQESNRYQLNMWSKIFAPVSVAVMMLMAVSFIFGP--L 298 Query: 300 RQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R I I +S F + F + P IL +F S+ LL+ ++ Sbjct: 299 RSVSAGSRIVIGISFGFLFYLLNEIFRPLSLVYGIPPILGAILPSSVFLFISVALLLKRR 358 >gi|15639869|ref|NP_219319.1| hypothetical protein TP0884 [Treponema pallidum subsp. pallidum str. Nichols] gi|189026107|ref|YP_001933879.1| hypothetical protein TPASS_0884 [Treponema pallidum subsp. pallidum SS14] gi|3323201|gb|AAC26574.1| conserved hypothetical integral membrane protein [Treponema pallidum subsp. pallidum str. Nichols] gi|189018682|gb|ACD71300.1| hypothetical integral membrane protein [Treponema pallidum subsp. pallidum SS14] Length = 362 Score = 94.6 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 66/359 (18%), Positives = 143/359 (39%), Gaps = 17/359 (4%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y+ + + L+ L + +V +L + + S ++++ Y IP L VTP Sbjct: 2 YVCEVVFKHILVGVLCFFLVFFVNNVLLFAQTLLTKHVSAADVVRLLLYSIPAALIYVTP 61 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 F + + L + N ELL + G S LI P+L + + ++F+F+ +++ P Sbjct: 62 FAVLVGSLLGLGRLRNNLELLALQVLGVSPRFLIFPLLSIGLCSALFVFVFSDVVVPASF 121 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 ++Q+ + ++ E + R + + + + + + + + IVD D+++ K+ Sbjct: 122 IRLRQVYWRVLSSVPSLGFESHT-TRKHNGVILSVGEVFHS-VMYQLLIVDKSDSRSLKV 179 Query: 187 YYAQSGSIDLDRQ-----AIILND---GEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 ++ ++ I ++D V+R P D+ Y + T+ Sbjct: 180 VSSRKSVLESSADQTVPFTIRMHDPCMLIVYRTRPRICDLIYGGRADYHVHTQQTQPEYF 239 Query: 239 V-LKANDQNLSFLLNPNPNNPNYR--PELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + L + L + P + TY+ EF K+ + + V+F +S + Sbjct: 240 MGLGPGGFSTCSLYREIQEKIKAKENPRHIATYQLEFQKKFSHPISVVLFIFLSFGLSTL 299 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + Q K L + G +W S ++ +P L L++ + F +I Sbjct: 300 SNISSQGKGFVG---GLIVVLG-YWIISIGGQELALRLSIVPSLALWIPNAALFFTALI 354 >gi|187736000|ref|YP_001878112.1| permease YjgP/YjgQ family protein [Akkermansia muciniphila ATCC BAA-835] gi|187426052|gb|ACD05331.1| permease YjgP/YjgQ family protein [Akkermansia muciniphila ATCC BAA-835] Length = 396 Score = 94.6 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 49/374 (13%), Positives = 126/374 (33%), Gaps = 21/374 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y+ R +F+M + I + + + + L + +P +L Sbjct: 8 SILDKYVARTWFTAFIMCTAILTLIYIIGDFADNVGDLMNLDAPLMGTFRFYLSQLPMIL 67 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 ++ P+ + T LT ++ ++E+ + +G S + + P++ A+ SI+ I Sbjct: 68 NLILPYTLLLGTLWALTKLSSSSEITGMLQSGRSLLRINTPIIIGAVFASIYFGIFGFHW 127 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISK----YNPNNTLQGIFIVD 177 P K + + + ++ + + +P N + + + Sbjct: 128 APNSALYRKLMFSSLSQNKNNHASQSTIYKNDAESRIWYLGNPPGIDSPGNPFRQVRVEQ 187 Query: 178 SRDTQTHKI-YYAQSGSIDLDRQAIILNDG----EVHRKSPISKDISIMKFKSYTLQTES 232 K +A + D + + D+ + + Y E Sbjct: 188 FSAPGKMKYELFADEATWDPASRTWTFRQAIKRNYSQEEPRQLHDVPVFAGQEYQTLKEH 247 Query: 233 ANSS-----TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGL 287 + + ++ + Q L + L + ++E+H R+ + +I Sbjct: 248 YPETPWQLISPNVRVDTQGTPAL-QELIKSGTTNARYLRSLQTEWHVRIARIFSCIILTF 306 Query: 288 ISIVAADKRALVRQRKKIHPIFISLSIS---FGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 I+I +A ++R + I I+L ++ ++ F + + + ++ Sbjct: 307 IAIPSAI---TFQRRSAMSGIGIALFLAAAMLFLYEFFPTLASAGYLPTWLGAWMPNIIY 363 Query: 345 CISSIFLLMIKKKY 358 I +I L K + Sbjct: 364 TIIAIRLFQTKLAH 377 >gi|237745417|ref|ZP_04575897.1| permease YjgP/YjgQ family protein [Oxalobacter formigenes HOxBLS] gi|229376768|gb|EEO26859.1| permease YjgP/YjgQ family protein [Oxalobacter formigenes HOxBLS] Length = 382 Score = 94.6 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 54/388 (13%), Positives = 128/388 (32%), Gaps = 36/388 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y I +S + + + + ++ ++ V L+ + P Sbjct: 1 MKILQRYFFSQIVKSVVFILVAFLGLFAFFDLISELSSVGRGGYQLHHVFVYILLGFPGY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + PF + T + N+E I+ + S + + ++ +F F+ + Sbjct: 61 IYELMPFAVLIGTIYAMALFASNSEFTIMRVSSLSTRDACWMLAKVGLVFLVFTFLVGEV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFR-----------LDDDLYIKISKYNPNNT 169 + P + ++ + + ++ I P+ T Sbjct: 121 LTPYTSRMASEFRNNLIGRNLSDKFRTGMWSKDTIRENGREGEIIGSRFMNIKTMRPDGT 180 Query: 170 LQGIFIVD-SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKF----- 223 ++ I + + +R+ + K AQ+G + + + +G V S +F Sbjct: 181 IEQIKLYEFNRELELVKTVTAQNGHYLGNHEWQL--NGVVESLIKSSGKSKGKRFPDSAP 238 Query: 224 ---------KSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHK 274 S I + AN + L N + + +Y+ F K Sbjct: 239 VVDTEKRDSIRLVSDVTPDILSVISVDANKMSAYELAVYNRH-LVENKQDATSYQIAFWK 297 Query: 275 RLTQWLFPV-IFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN- 332 ++ ++P +F ++++ R IF + I + H N Sbjct: 298 KI---IYPFSVFVMMALALPFAYLHFRSGGVSLKIFTGIMIGVAFILINNLFSHVGLLNT 354 Query: 333 --PYYIPILYLFLFCISSIFLLMIKKKY 358 P+ ++ LF +S++F L +++ Sbjct: 355 WPPFLTAVIPSVLFLLSAVFALWWVERH 382 >gi|56552290|ref|YP_163129.1| permease YjgP/YjgQ family protein [Zymomonas mobilis subsp. mobilis ZM4] gi|56543864|gb|AAV90018.1| permease YjgP/YjgQ family protein [Zymomonas mobilis subsp. mobilis ZM4] Length = 364 Score = 94.6 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 50/345 (14%), Positives = 115/345 (33%), Gaps = 18/345 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQIL---QRINLVSSSTESLNILLKISGYLIP 58 + Y+ + ++FI + +L RI V + ++ L P Sbjct: 9 RQIAFYLSKLFVVRCFAVLAALIFILQTLDMLGESARILAVKGNGQA--ELFHYVLLRTP 66 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 ++ PF + L+++N+N+E++ + G S ++ P++ L+ F+ Sbjct: 67 QLIARFLPFAVLLGVLITLSTLNQNSEIISMKAAGISAHQILMPLIASCFLIGCVSFVFN 126 Query: 119 NIIEPKCRSTIKQLSA-KAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN---TLQGIF 174 + + + + + A + N++ R D L I + L GI Sbjct: 127 DHLVTRATAKLDAWQAVDYGQPPPAATSGVNIWLRDGDHL-IHVDNVQGYGDNVRLSGIT 185 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + + I A +G + +V + ++ Sbjct: 186 VYNRSQKTLVSILSADTGQWTGHGWHLN----KVKSFDVAADTVTEKPVLDINTDLPPER 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + +KA++ + L + + ++ R T ++ ++ VA Sbjct: 242 FTLADVKADEMEVVPLYRAIKA-LDAAGRPTDELKASLIHRFTGAFAAILMPILGSVAGF 300 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL 339 L R + I I +S+ F F ++ + + Y P+L Sbjct: 301 G--LARSGRLFVRIVIGMSLGFAYFVADNFAL-AMGNLGTYPPLL 342 >gi|292486866|ref|YP_003529736.1| beta-lactamase/D-alanine carboxypeptidase ampH [Erwinia amylovora CFBP1430] gi|292900737|ref|YP_003540106.1| permease [Erwinia amylovora ATCC 49946] gi|291200585|emb|CBJ47716.1| putative permease [Erwinia amylovora ATCC 49946] gi|291552283|emb|CBA19320.1| beta-lactamase/D-alanine carboxypeptidase ampH [Erwinia amylovora CFBP1430] Length = 358 Score = 94.6 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 50/361 (13%), Positives = 126/361 (34%), Gaps = 11/361 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + I++ ++ + + + +L + +P Sbjct: 3 GVLDRYIGKTI---FNTIMATLFMLVSLSGIIKFVDQLRKTGQGEYTVLGAGLYTLLSVP 59 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L ++ + +EL+++ +G +R+ + V+ AI L + Sbjct: 60 KDIEIFFPMAALLGALLGLGTLAQRSELVVMQASGFTRMQIAASVMKTAIPLVLLTMAIG 119 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI-VD 177 + P+ + A+ + + + L+ + D+ +I I + +N L GI I Sbjct: 120 EFVAPQGEQMARNYRAQQLMGGSLLSTQSGLWAKDGDN-FIFIERMRDDNQLSGISIYHF 178 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-DISIMKFKSYTLQTESANSS 236 + + YA S + D++ L + S + + + + Sbjct: 179 DPQRRLKTVRYAASAKYNADKKLWELAQVDQSDLSDTQQINGNQTLSGEWKTSLTPDKLG 238 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L ++S L + + ++ Y+ ++ Q L + L+++ Sbjct: 239 VVSLDPGALSISGLYSYSK-YLKQSGQMAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGP 297 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-PYYIPILYLFLFCISSIFLLMIK 355 IS F V + + P +L F S+ +L+ + Sbjct: 298 LRSVSMGMRVVTGISFGFLFYVLDQIFGPLSLVYNIPPILGALLPSAAFFALSVAMLVKR 357 Query: 356 K 356 + Sbjct: 358 R 358 >gi|293393092|ref|ZP_06637407.1| YjgP/YjgQ family membrane protein [Serratia odorifera DSM 4582] gi|291424238|gb|EFE97452.1| YjgP/YjgQ family membrane protein [Serratia odorifera DSM 4582] Length = 356 Score = 94.6 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 50/359 (13%), Positives = 119/359 (33%), Gaps = 8/359 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI + I + +M+ +V ++ +I+ + ++ V S + +P + Sbjct: 3 GVLDRYIGKTIFNTIIMTLFMLVSLSGIIKFVDQLRKVGQGEYSALGAGMYTLLSVPKDV 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L + +EL+++ +G +R+ + V+ AI L + + Sbjct: 63 EIFFPMAALLGALLGLGQLATRSELVVMQASGFTRLQIAGSVMKTAIPLVLLTMAIGEWV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV---DS 178 P+ + A+ + + L+ + +D +I I + N L G+ I D Sbjct: 123 APQGEQMARNYRAQQMYGGSLLSTKNGLWAKDGND-FIYIERVAGENELSGVNIYHFNDR 181 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 R + + YA + + + + D + + + Sbjct: 182 R--RLETVRYAATATFEDGAWQLSQVDTSDLTNEKQVTGTQTLT-GVWKTNLTPDKLGVV 238 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 L + ++S L N + Y+ ++ L + L+++ Sbjct: 239 ALDPDSLSISGLHN-YVKYLKQSGQEASRYQLNMWSKIFSPLSVAVMMLMALSFIFGPLR 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P + L L + L++K++ Sbjct: 298 SVPMGMRVVTGISFGFLFYVMDQIFGPLSLVYNMPPVLGALLPSLLFLLISVYLLLKRR 356 >gi|218516795|ref|ZP_03513635.1| putative permease protein [Rhizobium etli 8C-3] Length = 102 Score = 94.6 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 38/92 (41%), Positives = 61/92 (66%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YILR +G+ FL++ L ++ I W Q+LQRINLV+ S +S+ K++ ++P++ Sbjct: 11 MKLLETYILRRVGQMFLVALLPVLAIIWTTQVLQRINLVTDSGQSIGSFAKLATMILPSI 70 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNT 92 +P+V PF + T LT+MN ++EL +ID Sbjct: 71 IPVVLPFALVIAITQTLTTMNNDSELTVIDAA 102 >gi|104783410|ref|YP_609908.1| hypothetical protein PSEEN4441 [Pseudomonas entomophila L48] gi|95112397|emb|CAK17124.1| conserved hypothetical protein, putative membrane protein [Pseudomonas entomophila L48] Length = 353 Score = 94.6 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 50/361 (13%), Positives = 130/361 (36%), Gaps = 14/361 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + + L I+ +A + + ++ + S T ++ P Sbjct: 1 MVKLDRYIGQSVLLAILAVLGIILGLASLFAFIDEMSDL-SDTYTVMDAGSFVLLTAPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L S+ ++EL I+ G S ++ V+ ++L + + Sbjct: 60 LYDMLPMAALIGCLIGLGSLASSSELTIMRAAGVSIGRIVWAVMKPMLVLMLVGLLIGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF-IVDSR 179 + P + + + AQ + ++ R ++ ++ I+ PN L G+ Sbjct: 120 VAPVTENKAQADRSLAQGGGEAQSSKRGMWHRQGEE-FVHINSVQPNGLLLGVTRYRFDE 178 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + +A+ + +LND ++ + + + +T+V Sbjct: 179 QRKIQTSSFARKAQYHEGK--WVLNDVATTYFRGDHTEVVKAPEEVWDVSVTPELLNTVV 236 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQW--LFPVIFGLISIVAADKRA 297 L +++ L + + + + Y F ++ Q ++ IS + R+ Sbjct: 237 LAPESLSITGLWD-YIHYLSDQGLNNSRYWLAFWTKVLQPAVTAALVLMAISFIFGPLRS 295 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY-LFLFCISSIFLLMIKK 356 + ++ +F + + F ++ Q + P+L + I ++ L + + Sbjct: 296 VTLGQR----VFTGVLVGFVFRIAGD-LLGPSSQVFGFPPLLAVVIPAGICALAGLWLMR 350 Query: 357 K 357 + Sbjct: 351 R 351 >gi|160872818|ref|ZP_02062950.1| permease [Rickettsiella grylli] gi|159121617|gb|EDP46955.1| permease [Rickettsiella grylli] Length = 355 Score = 94.6 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 51/358 (14%), Positives = 118/358 (32%), Gaps = 13/358 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+ R I + L ++ + +IQ++ + + +L +P+ Sbjct: 1 MNIIDRYLGRTIIHTTLSVLGILLILFALIQLISETRDIGTGHYTLTSAFSYVLLTLPSQ 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 P + + L +++++EL+I+ G S + ++ + + + Sbjct: 61 FYNFFPIAILLGSILGLNVLSKHSELMILHANGVSLYQMAWSLIKATLWMVFITVLIGEG 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SR 179 + P + ++ + D +I I L + Sbjct: 121 LAPHAARLAESHKFFLTTKGQTLTTQQGSVWIRDGHNFIYIQSILDPTHLNHVNCYQFDD 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 D K +A+ ++ +A D + + + + + + Sbjct: 181 DNNLLKASFAK--QVNYKAKAWHAYDIATSLITLNKVKKKFIAHEIWPFSFSPKLLTISI 238 Query: 240 LKANDQNLSFLLNPNPNNPNYRPE---LLETYRSEFHKRLTQW--LFPVIFGLISIVAAD 294 +K + +L L +YR + Y F KR+ + L+ ++ I Sbjct: 239 IKPEEMSLRQL----HEYIHYRKKNHLNTSPYSFAFWKRIVEPISLWVMMCLAIPFSFKH 294 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 R L K + I I S + + I + P+ +L LF+F + +I L+ Sbjct: 295 LRTLATSLKTLAGITIGFSFYLLNNFLGPFAI-VYQWPPFLAALLPLFIFMLIAILLM 351 >gi|224024955|ref|ZP_03643321.1| hypothetical protein BACCOPRO_01686 [Bacteroides coprophilus DSM 18228] gi|224018191|gb|EEF76189.1| hypothetical protein BACCOPRO_01686 [Bacteroides coprophilus DSM 18228] Length = 369 Score = 94.6 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 55/357 (15%), Positives = 125/357 (35%), Gaps = 14/357 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 +K + YI+ ++ + I+ IA V I + I+ ++ L I+ IP Sbjct: 11 LKRLDKYIIIKFLGTYFFAIALIISIAVVFDINENIDDFINNKAPLKAIVFDYYLNFIPY 70 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + +TG S L+ P + A ++++ +I Sbjct: 71 YTNLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRLMVPYMISAGIIALVTYILST 130 Query: 120 IIEPKC---RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + P R +Q+ + ++ +D + + +Y N F + Sbjct: 131 EVIPTGSVTRLKFEQVYKNKKKVDYVRNIQ----LEVDSGVIAYMERYEDYNRTGYRFSL 186 Query: 177 DS-RDTQTHKIYYAQSGSIDLDRQA-IILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 D D + A+ + D I+ D + + + I+ + E + Sbjct: 187 DKFEDHKLVSHLTARRVTYDTATVHKWIIRDYMIREMKGMRETITRGDRMDSIINMEPQD 246 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + L ++ + E++KR+ I +I + Sbjct: 247 FLITRGQQETMTSPQLREYIDKQKKRGFANIKIFEVEYYKRIATSFAAFILTVIGLS--- 303 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + R+ + I + +SF + F I N P L +++ I +F+ Sbjct: 304 LSSQKRKGGMGLHLGIGIGLSFS-YILFQTISSTFAINGNVPPNLAVWIPNILYLFI 359 >gi|283834897|ref|ZP_06354638.1| membrane protein, YjgP/YjgQ family [Citrobacter youngae ATCC 29220] gi|291069157|gb|EFE07266.1| membrane protein, YjgP/YjgQ family [Citrobacter youngae ATCC 29220] Length = 360 Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 53/361 (14%), Positives = 123/361 (34%), Gaps = 10/361 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + + I++ ++ + + + + + P Sbjct: 5 GVLDRYIGKTI---FTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDAMGAGLYTLLSAP 61 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L + + +EL+++ +G +R+ + V+ AI L + Sbjct: 62 KDIQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIG 121 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 + P+ + A+ + ++ L+ + D D ++ I + + L GI I Sbjct: 122 EWVAPQGEQMARNYRAQQMYGGSLLSTQQGLWAK-DGDSFVYIERVKGDAELGGISIYSF 180 Query: 179 RDTQT-HKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSS 236 D + + YA S + D +++ L+ E + + P S ++ Sbjct: 181 NDKRRLQSVRYAASATFDPEQKIWRLSQVDESNLQDPKQITGSQTVSGTWKTNLTPDKLG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + ++S L N + Y+ ++ Q L + L+++ Sbjct: 241 VVALDPDALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKVFQPLSVAVMMLMALSFIFGP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 IS F V + + P I L LM++K Sbjct: 300 LRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLMLRK 359 Query: 357 K 357 Sbjct: 360 S 360 >gi|241761652|ref|ZP_04759739.1| permease YjgP/YjgQ family protein [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373960|gb|EER63493.1| permease YjgP/YjgQ family protein [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 364 Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 50/345 (14%), Positives = 115/345 (33%), Gaps = 18/345 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQIL---QRINLVSSSTESLNILLKISGYLIP 58 + Y+ + ++FI + +L RI V + ++ L P Sbjct: 9 RQIAFYLSKLFVVRCFAVLAALIFILQTLDMLGESARILAVKGNGQA--ELFHYVLLRTP 66 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 ++ PF + L+++N+N+E++ + G S ++ P++ L+ F+ Sbjct: 67 QLIARFLPFAVLLGVLITLSTLNQNSEIISMKAAGISAHQILMPLIASCFLIGCVSFVFN 126 Query: 119 NIIEPKCRSTIKQLSA-KAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN---TLQGIF 174 + + + + + A + N++ R D L I + L GI Sbjct: 127 DRLVTRATAKLDAWQAVDYGQPPPAATSGVNIWLRDGDHL-IHVDNVQGYGDNVRLSGIT 185 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + + I A +G + +V + ++ Sbjct: 186 VYNRSQKTLVSILSADTGQWTGHGWHLN----KVKSFDVAADTVTEKPVLDINTDLPPER 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + +KA++ + L + + ++ R T ++ ++ VA Sbjct: 242 FTLADVKADEMEVVPLYRAIKA-LDAAGRPTDELKASLIHRFTGAFAAILMPILGSVAGF 300 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL 339 L R + I I +S+ F F ++ + + Y P+L Sbjct: 301 G--LARSGRLFVRIVIGMSLGFAYFVADNFAL-TMGNLGTYPPLL 342 >gi|126667524|ref|ZP_01738494.1| predicted Permease [Marinobacter sp. ELB17] gi|126627950|gb|EAZ98577.1| predicted Permease [Marinobacter sp. ELB17] Length = 353 Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 45/317 (14%), Positives = 113/317 (35%), Gaps = 8/317 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+++ +G + + + ++ + + + ++ +++ ++L+ L +P Sbjct: 1 MHKIDRYVMKTVGGAMFLVMVVVLSLDLIFAFIAELDGTANNYQTLDA-LWYVFLTLPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P M L SM ++EL +I G S ++ + A+ + + Sbjct: 60 IYDYLPLGAFMGCLVGLGSMASSSELTVIRAAGVSIKRIVWSAMKPALFVVLLGVGIGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI-FIVDSR 179 + P + A A A + L+ + +++I ++ P+ L GI + Sbjct: 120 LAPPAERIAQSEKAVALGAGSNVAAASGLW-HREGNVFIHMNAVQPSGVLFGISMFRFNE 178 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 Q +A+ D IL + + + + + S ++ Sbjct: 179 QRQLLAASFAERAIYQGDH--WILENVQTTELAEQGTTRVTHNQLRWESGLSPSVLSVLI 236 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWL--FPVIFGLISIVAADKRA 297 +K + ++ LL + + Y F K+ L ++ IS + R+ Sbjct: 237 VKPENLAMTGLLT-YARYLDEQGLSASRYWLAFWKKTLMPLGTAVMVLVAISFIFGPLRS 295 Query: 298 LVRQRKKIHPIFISLSI 314 + + + + LS Sbjct: 296 VTMGFRVFTGLLVGLSF 312 >gi|254446939|ref|ZP_05060406.1| permease YjgP/YjgQ [gamma proteobacterium HTCC5015] gi|198263078|gb|EDY87356.1| permease YjgP/YjgQ [gamma proteobacterium HTCC5015] Length = 347 Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 50/352 (14%), Positives = 121/352 (34%), Gaps = 9/352 (2%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTE-SLNILLKISGYLIPTVLPMVTP 66 + R I + + L I+F+ L V+ + S + +P P Sbjct: 1 MARAILAATALVLLVILFLDAFFGFLGEGKYVARYADYSYWHAIGYVMLRVPGKAMEFMP 60 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + L ++ N+EL + G S+ ++ + +++++ + + + P+ Sbjct: 61 AITLIGALLGLGTLASNSELTAMRAAGLSKGRIVWGGMKTGLIIALAVALLGEYVAPQSD 120 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 A+AQ S L + F+ + D ++ I + P+ L+G+ I ++ + ++ Sbjct: 121 LKAAAFRAQAQGRAITSELRD--FWLKNGDEFVYIKRAEPDKRLRGVRIFQVQEGELKRL 178 Query: 187 YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 A S LN +R + ++ + + + L + Sbjct: 179 LKAASAQ--HTASGWRLNQVREYRFEDDAVSRKVIGQMTKSQLVDVDLFEVAQLSPENMR 236 Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 L L N + YR F K++T L ++ L+++ R Sbjct: 237 LLELDN-YIAYLDDNRLEATLYRKAFWKKVTAPLSILVMLLLAMPFIFANR--RSGNAGA 293 Query: 307 PIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCI-SSIFLLMIKKK 357 + I + + S I + + + + +++ ++K+ Sbjct: 294 RLVIGILFGMSYYIISSLIENLGQVYGVPVLLGAFTPIVAFTALGFWLLKRS 345 >gi|261749332|ref|YP_003257017.1| hypothetical protein BPLAN_247 [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497424|gb|ACX83874.1| conserved hypothetical protein [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 361 Score = 94.3 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 57/356 (16%), Positives = 130/356 (36%), Gaps = 15/356 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 MK + YI+R I +F+ + + I+ +I + QR++ + ++ S+ + L+ + Sbjct: 1 MKILDRYIIRNILVTFIFITILLQIISVIIDLSQRMHRLENNQGSIKDALIYYYPFWSIW 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + +N+++E+ I +G S + P L A L+ + I Sbjct: 61 LAYTFSPISVFLSIIFFTSRLNKHSEINAILASGISFKRITIPYLISASLIGMGALIINY 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEEN---LFFRLDDDLYIKISKYNPNNTLQGIFIV 176 P + + L+ + EN + ++ ++ Y+ I ++ + I Sbjct: 121 SFLPLANKMKNKFHYQYLLSSRYKNKYENNQTISTQISNNEYLFIRNFSRKKNIGQDCIY 180 Query: 177 DSRDTQTHKIYY--AQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + IY A++ + IL++ + K Sbjct: 181 QKFNGNK-LIYLLKAKNIFWYKKHRIYILSNYSETYLNKNKDIFFKGVHKIQNFSMTPEE 239 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 A +S L + T+ +E+++R + I L+ + Sbjct: 240 LLPEEYIAETMTISELRKFIDREKKRGNSNINTHLNEYYQRTSYPFSNFILTLLGLSI-- 297 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 ++ + H + + ++F + F I K+ YIP YL ++ + IF Sbjct: 298 ---SSKKGEPAHNFIMGIILAFI--YIFCTEISKVYSTKDYIP-SYLSVWLPNGIF 347 >gi|114797396|ref|YP_760970.1| YjgP/YjgQ permease [Hyphomonas neptunium ATCC 15444] gi|114737570|gb|ABI75695.1| putative permease, YjgP/YjgQ family [Hyphomonas neptunium ATCC 15444] Length = 373 Score = 94.3 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 58/367 (15%), Positives = 131/367 (35%), Gaps = 12/367 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTE-SLNILLKISGYLIPTV 60 + YILR ++ ++ +I +++++ + E +L L++S +P + Sbjct: 5 SRIQRYILRECLSGLVLVLGILLLAILMIDVVEQMRTIGGDVEITLLDALRLSLMKLPMI 64 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + PF T T +NR +EL II +G S + PV+ L + L IF ++ N Sbjct: 65 IEQTLPFALLAATMMAFTRLNRRSELSIIRASGLSAWRFLTPVIVLGVALGIFSSLALNP 124 Query: 121 IEPKCRSTIKQLSAKAQL--ALTFSYLEENLFFRLDDD---LYIKISKYNPNN-TLQGIF 174 + + + + A+ E ++ R DD I + TL + Sbjct: 125 LAARLSQSFEAERARLLDVGREVVQVAETGVWLRQGDDSSQYVIHARRVEDGGRTLLDVK 184 Query: 175 IVDSRDTQTHKIYYAQSGSI-DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 I++ + + + +D + +LN+G ++ + + + TL ++ Sbjct: 185 IIEEQRLYNGRQPTNDFAFVRRIDAEKAVLNEGFWQLENLVENLPNQAPERRATLAIPTS 244 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKR-LTQWLFPVIFGLISIVA 292 + +L + P + S + R T PV+F ++++ Sbjct: 245 LDAVRLLDEYASPNTVGFWELPR-FIFETRAAGLDTSRYTMRLFTLTATPVLFTAMALIG 303 Query: 293 ADK-RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIF 350 A L R + + + G+++ + + + + + Sbjct: 304 ALACLRLQRLGGTSRLLATGVLAAIGLYFFTQFSSSLGSTGAAPAVVAAWSPPLFVLFVS 363 Query: 351 LLMIKKK 357 L I + Sbjct: 364 LAFIAYR 370 >gi|270265133|ref|ZP_06193396.1| hypothetical protein SOD_k01710 [Serratia odorifera 4Rx13] gi|270041067|gb|EFA14168.1| hypothetical protein SOD_k01710 [Serratia odorifera 4Rx13] Length = 356 Score = 94.3 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 49/359 (13%), Positives = 117/359 (32%), Gaps = 8/359 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI + I + +M+ +V ++ +I+ + ++ V S + +P + Sbjct: 3 GVLDRYIGKTIFNTIIMTLFMLVSLSGIIKFVDQLRKVGQGDYSALSAGMFTLLSVPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L + +EL+++ +G +R+ + V+ AI L + + Sbjct: 63 EIFFPMAALLGALLGLGQLATRSELVVMQASGFTRMQIAGSVMKTAIPLVLLTMAIGEWV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV---DS 178 P+ + A+ + + L+ + +D +I I + L G+ I D Sbjct: 123 APQGDQMARNYRAQQMYGGSLLSTKNGLWAKDGND-FIYIERVAGEKELSGVNIYHFNDQ 181 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 R + + YA + S + + D + + + Sbjct: 182 R--RLETVRYAATASFEDGVWKLSQVDTSDLTNEKQVTGTQTLT-GEWKTNLTPDKLGVV 238 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 L ++S L N + Y+ ++ L + L+++ Sbjct: 239 ALDPTSLSISGLHN-YVKYLKQSGQEANRYQLNMWSKVFSPLSVAVMMLMALSFIFGPLR 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P + L + + +++K+K Sbjct: 298 SVPMGVRVVTGISFGFLFYVLDQIFGPLSLVYNMPPVLGALLPSMLFLLISVYMLLKRK 356 >gi|312968689|ref|ZP_07782898.1| conserved hypothetical protein [Escherichia coli 2362-75] gi|312286907|gb|EFR14818.1| conserved hypothetical protein [Escherichia coli 2362-75] Length = 359 Score = 94.3 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 57/366 (15%), Positives = 130/366 (35%), Gaps = 26/366 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N + I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVDVEIFHYRD 180 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK--------FKSYTLQTE 231 YA+S +I+ D+ IL+ G H+K K+ F S L+ Sbjct: 181 DLSLESYIYARSATIEDDKT-WILH-GVNHKKWLNGKETQETSDYLAWQSTFTSMNLEEL 238 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S +T ++ + + +L + YR ++L Q + + L+++ Sbjct: 239 SMPGNTFSVRQLNHYIHYL--------QETGQPSSEYRLALWEKLGQPILTLAMILLAVP 290 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-----FLFCI 346 + R + + + + + + +++ P+ L F+ Sbjct: 291 F--TFSAPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVA 348 Query: 347 SSIFLL 352 S+ Sbjct: 349 LSLVYW 354 >gi|331684625|ref|ZP_08385217.1| putative permease [Escherichia coli H299] gi|331078240|gb|EGI49446.1| putative permease [Escherichia coli H299] Length = 359 Score = 94.3 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 57/366 (15%), Positives = 130/366 (35%), Gaps = 26/366 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N + I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVDVEIFHYRD 180 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK--------FKSYTLQTE 231 YA+S +I+ D+ IL+ G H+K K+ F S L+ Sbjct: 181 DLSLESYIYARSATIEDDKT-WILH-GVNHKKWLNGKETQETSDNLPWQSAFTSMNLEEL 238 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S +T ++ + + +L + YR ++L Q + + L+++ Sbjct: 239 SMPGNTFSVRQLNHYIHYL--------QETGQPSSEYRLALWEKLGQPILTLAMILLAVP 290 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-----FLFCI 346 + R + + + + + + +++ P+ L F+ Sbjct: 291 F--TFSAPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVA 348 Query: 347 SSIFLL 352 S+ Sbjct: 349 LSLVYW 354 >gi|16125407|ref|NP_419971.1| hypothetical protein CC_1155 [Caulobacter crescentus CB15] gi|221234150|ref|YP_002516586.1| hypothetical protein CCNA_01213 [Caulobacter crescentus NA1000] gi|13422473|gb|AAK23139.1| conserved hypothetical protein [Caulobacter crescentus CB15] gi|220963322|gb|ACL94678.1| hypothetical membrane spanning protein [Caulobacter crescentus NA1000] Length = 353 Score = 94.3 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 45/340 (13%), Positives = 111/340 (32%), Gaps = 7/340 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 +LY+LR + L + L ++ + ++ +L + + + + + +P + Sbjct: 2 KLQLYVLRTVATRILGAALILMSVLQILDLLDVTSDILDRGLGMAGVGYYAALRLPRLFE 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 V P + + R + ++ + +G S ++ + A+ + + + ++ Sbjct: 62 QVAPIAVLAGGLFAFSQLARESAIVAMRASGISGYRIVGMAVPAAVAVMLLDALCGQVLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P+ T+ F D L I + T+ G+ I RD++ Sbjct: 122 PRADPTLADWWRNTTPVAERKEPVPRTFRAGAD-LVIGANASADGRTITGVTIF-RRDSK 179 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + ++ + D +A L + R + S S+ + + Sbjct: 180 GILVEKVEAPAARYDGKAWTLEQPKTTRFAGDLSQASTAAATSWPTALRPQDVQGLFGDD 239 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + + N + RPE Y + ++ L+S A Q Sbjct: 240 SMPTAASARRALENGGSDRPESF--YATHLQAAFASPFVSLVMLLLSAPVALANFRSGQG 297 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 + ++ + F V G + ++ P L ++ Sbjct: 298 AVLLTGGLAAGLMFLVANGMLTALG---ESGALTPFLAVW 334 >gi|207092118|ref|ZP_03239905.1| hypothetical protein HpylHP_03688 [Helicobacter pylori HPKX_438_AG0C1] Length = 272 Score = 94.3 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 43/248 (17%), Positives = 96/248 (38%), Gaps = 4/248 (1%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + Y+ + + F L + FI+ ++ ++ ++ S L+++ Y +P + Sbjct: 2 IKHYLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFF 61 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 + P F L+ ++ + ELL+ + G S + K + L++L+S L + I+ P Sbjct: 62 ILPITFFAACALGLSRLSYDHELLVFFSLGVSPKKMTKAFVPLSLLVSAILLVFSLILIP 121 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 +S + + + F + D + + K NN+ + + ++ Sbjct: 122 TSKSAYYGFLRQ-KKDKIDINIRAGEFGQKLGDWLVYVDK-AENNSYDNLVLFSNKSLSQ 179 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL--QTESANSSTIVLK 241 AQ G+I+ LN + H + + F+ L + +S NS+ Sbjct: 180 ESFILAQKGNINNQNGVFELNLYKGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYL 239 Query: 242 ANDQNLSF 249 L + Sbjct: 240 QGTDYLGY 247 >gi|218296305|ref|ZP_03497061.1| permease YjgP/YjgQ family protein [Thermus aquaticus Y51MC23] gi|218243377|gb|EED09907.1| permease YjgP/YjgQ family protein [Thermus aquaticus Y51MC23] Length = 347 Score = 94.3 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 52/342 (15%), Positives = 118/342 (34%), Gaps = 14/342 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ + Y+LR FL IV + + + + + + LL Y P Sbjct: 1 MKTLDRYLLREALSLFLGGLAAIVLLFLAGAVYEVLAPLVAKGADPYTLLLYLLYRAPEA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + +L+ M ++EL + G +R ++ P L LA+L+++ +F+ Sbjct: 61 LVRGAPVAYLFTLLLLLSRMAEDSELKALLALGVARERVLLPFLLLALLIALAVFLLGES 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + PK + + L + L + L F+ + + + + I R Sbjct: 121 LVPKALAAGQDLLRRQVLERPRALLTPGTTFQDARGRVVYVGEVAGDR------IGKLRV 174 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ A+ G +++ +G+ ++ +F+ + + Sbjct: 175 LSQEEVLLAERGRFQEG--VLLVEEGQRVTYEGDRPR-TLTRFQKGEILLKDLTFEPWQN 231 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 AN L L + +H+R + V+F L ++ A Sbjct: 232 PANRMTLGEL-KKEVERLRALGVKAGLEATTYHRRYAEPASAVVFALFAVGLA----FYL 286 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 ++ ++I ++ + + + P+L + Sbjct: 287 LGGSRSLGWVGVAILTFFYYATWSVGRIMGEQNALDPLLAAW 328 >gi|260845739|ref|YP_003223517.1| hypothetical protein ECO103_3663 [Escherichia coli O103:H2 str. 12009] gi|257760886|dbj|BAI32383.1| conserved predicted membrane protein [Escherichia coli O103:H2 str. 12009] Length = 359 Score = 94.3 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 58/366 (15%), Positives = 130/366 (35%), Gaps = 26/366 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK--------FKSYTLQTE 231 YA+S +I+ D+ IL+ G H+K K+ F S L Sbjct: 181 DLSLESYIYARSATIEDDKT-WILH-GVNHKKWLNGKETLETSDNLAWQSAFTSMDLDEL 238 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S +T ++ + + +L + YR ++L Q + + L+++ Sbjct: 239 SMPGNTFSVRQLNHYIHYL--------QETGQPSSEYRLALWEKLGQPILTLAMILLAVP 290 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-----FLFCI 346 + R + + + + + + +++ P+ L F+ Sbjct: 291 F--TFSAPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVA 348 Query: 347 SSIFLL 352 S+ Sbjct: 349 LSLVYW 354 >gi|291060243|gb|ADD72978.1| putative permease, YjgP/YjgQ family [Treponema pallidum subsp. pallidum str. Chicago] Length = 365 Score = 94.3 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 66/359 (18%), Positives = 143/359 (39%), Gaps = 17/359 (4%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y+ + + L+ L + +V +L + + S ++++ Y IP L VTP Sbjct: 5 YVCEVVFKHILVGVLCFFLVFFVNNVLLFAQTLLTKHVSAADVVRLLLYSIPAALIYVTP 64 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 F + + L + N ELL + G S LI P+L + + ++F+F+ +++ P Sbjct: 65 FAVLVGSLLGLGRLRNNLELLALQVLGVSPRFLIFPLLSIGLCSALFVFVFSDVVVPASF 124 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 ++Q+ + ++ E + R + + + + + + + + IVD D+++ K+ Sbjct: 125 IRLRQVYWRVLSSVPSLGFESHT-TRKHNGVILSVGEVFHS-VMYQLLIVDKSDSRSLKV 182 Query: 187 YYAQSGSIDLDRQ-----AIILND---GEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 ++ ++ I ++D V+R P D+ Y + T+ Sbjct: 183 VSSRKSVLESSADQTVPFTIRMHDPCMLIVYRTRPRICDLIYGGRADYHVHTQQTQPEYF 242 Query: 239 V-LKANDQNLSFLLNPNPNNPNYR--PELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + L + L + P + TY+ EF K+ + + V+F +S + Sbjct: 243 MGLGPGGFSTCSLYREIQEKIKAKENPRHIATYQLEFQKKFSHPISVVLFIFLSFGLSTL 302 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + Q K L + G +W S ++ +P L L++ + F +I Sbjct: 303 SNISSQGKGFVG---GLIVVLG-YWIISIGGQELALRLSIVPSLALWIPNAALFFTALI 357 >gi|256019097|ref|ZP_05432962.1| hypothetical protein ShiD9_09284 [Shigella sp. D9] Length = 359 Score = 94.3 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 58/366 (15%), Positives = 130/366 (35%), Gaps = 26/366 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK--------FKSYTLQTE 231 YA+S +I+ D+ IL+ G H+K K+ F S L Sbjct: 181 DLSLESYIYARSATIEDDKT-WILH-GVNHKKWLNGKETLETSDNLAWQSAFTSMDLDEL 238 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S +T ++ + + +L + YR ++L Q + + L+++ Sbjct: 239 SMPGNTFSVRQLNHYIHYL--------QETGQPSSEYRLALWEKLGQPILTLAMILLAVP 290 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-----FLFCI 346 + R + + + + + + +++ P+ L F+ Sbjct: 291 F--TFSAPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPIAFVLVA 348 Query: 347 SSIFLL 352 S+ Sbjct: 349 LSLVYW 354 >gi|237729200|ref|ZP_04559681.1| conserved hypothetical protein [Citrobacter sp. 30_2] gi|226908929|gb|EEH94847.1| conserved hypothetical protein [Citrobacter sp. 30_2] Length = 360 Score = 94.3 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 53/361 (14%), Positives = 122/361 (33%), Gaps = 10/361 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + + I++ ++ + + + + + P Sbjct: 5 GVLDRYIGKTI---FTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDAMGAGLYTLLSAP 61 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L + + +EL+++ +G +R+ + V+ AI L + Sbjct: 62 KDIQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIG 121 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 + P+ + A+ + ++ L+ + D D ++ I + + L GI I Sbjct: 122 EWVAPQGEQMARNYRAQQMYGGSLLSTQQGLWAK-DGDSFVYIERVKGDAELGGISIYSF 180 Query: 179 RDTQT-HKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSS 236 D + + YA S + D +++ L+ E + P S ++ Sbjct: 181 NDKRRLQSVRYAASATFDPEQKVWRLSQVDESNLTDPKQITGSQTVSGTWKTNLTPDKLG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + ++S L N + Y+ ++ Q L + L+++ Sbjct: 241 VVALDPDALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKVFQPLSVAVMMLMALSFIFGP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 IS F V + + P I L LM++K Sbjct: 300 LRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLMLRK 359 Query: 357 K 357 Sbjct: 360 S 360 >gi|332524895|ref|ZP_08401082.1| hypothetical protein RBXJA2T_03768 [Rubrivivax benzoatilyticus JA2] gi|332108191|gb|EGJ09415.1| hypothetical protein RBXJA2T_03768 [Rubrivivax benzoatilyticus JA2] Length = 370 Score = 94.3 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 54/372 (14%), Positives = 134/372 (36%), Gaps = 19/372 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M++ + R I S + L + + + I +++++ V + + + + + +P Sbjct: 1 MRTVRRLLYRDIVASVVFVALAFLSLFFFIDLVEKMGNVGRAGRTTGVAVMSALLELPGH 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + T L + +++E I+ G + + L ++ F + Sbjct: 61 FYELMPIAVLIGTIYSLARLAQSSEFTILRTGGLGPGRALSLLAVLGVVFGAITFAVGDY 120 Query: 121 IEPKCRSTIKQLSAK----AQLALTFSYLEENLFFRLDDDLY-IKISKYNPNNTLQGIFI 175 + P + A ++ T ++L+E + Y + ++ P+ L GI I Sbjct: 121 VVPVAERKAVAVKALAAGGMRVGRTGAWLKEKRMTPEGERSYSVNLAGTTPDGRLSGIRI 180 Query: 176 VD-SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHR------KSPISKDISIMKFKSYTL 228 + D + A++G++ D L++ EV R + P + + Sbjct: 181 FEFDADGRLSVRIAAKTGTVAADGT-WTLSEAEVTRWPDVRLREPAGVVEQRLPELRWA- 238 Query: 229 QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 T + + + + L + + + + ++Y F K+ L ++ + Sbjct: 239 STLTPEVVAAAVMPRETMTTADLWRYSVHLSDQAQATQSYEILFWKKALYPLACLVMTAL 298 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP-----ILYLFL 343 ++ A A I L ISF + + + + +I +LYL + Sbjct: 299 ALPFAYLHARAGSVSLKVFGGIMLGISFVLLNNLAGHVGLLRDWTPWIAAATPSLLYLLM 358 Query: 344 FCISSIFLLMIK 355 + +L+ + Sbjct: 359 SLAAFTWLVRYR 370 >gi|91215236|ref|ZP_01252208.1| hypothetical protein P700755_13102 [Psychroflexus torquis ATCC 700755] gi|91186841|gb|EAS73212.1| hypothetical protein P700755_13102 [Psychroflexus torquis ATCC 700755] Length = 337 Score = 94.3 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 49/341 (14%), Positives = 122/341 (35%), Gaps = 9/341 (2%) Query: 22 FIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMN 81 + I ++ + ++I+ + + + +L G ++ P + + + Sbjct: 1 MFIPIGIIVNLSEKIDDIKENEVPIEEVLVFYGNFTIYFANLLFPIFLFLSIIWFTSKLA 60 Query: 82 RNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALT 141 NTE++ I ++G S ++P L A L+ + + P + + Sbjct: 61 NNTEIIAILSSGISFSRFLRPYLIGATLVCGIALMFTMYLVPNASQGFNEFKYQYFKKGK 120 Query: 142 FSYLEENLFFRLDDDLYIKISKY-NPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQA 200 S +N++ +++D+ +I + + T + + + A + Sbjct: 121 QSQETQNVYRQVNDNEFIFATNFQTSTGTARNFTLEHFEGQEMTFKISASRLKFNAKDST 180 Query: 201 IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNY 260 LN+ E + I L E + + A + L + Sbjct: 181 YTLNNFEKRTINEREDVIERQSSLDTILPFEFGELTPVEYIAETLDYGELKDFITTEKRR 240 Query: 261 RPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFW 320 + +Y+ +KR + + I +I++ A+ R+ + I + I+F F Sbjct: 241 GSANISSYQIVAYKRWSVPVSAFILTIIAVSV---SAMKRRGGMGANLAIGIVIAFA-FI 296 Query: 321 GFSYIIHKIEQNPYYIPILYLF----LFCISSIFLLMIKKK 357 + I + + P++ ++ LF + +I+LL+ K+ Sbjct: 297 FLDKVFGTIAEKSTFSPLIAVWFSNILFGLLAIYLLIKAKR 337 >gi|288803319|ref|ZP_06408752.1| membrane protein [Prevotella melaninogenica D18] gi|288334139|gb|EFC72581.1| membrane protein [Prevotella melaninogenica D18] Length = 377 Score = 94.3 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 52/361 (14%), Positives = 128/361 (35%), Gaps = 16/361 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 + + YI++ +++ + L I+ IA V + ++ + I+ +P Sbjct: 17 IGILDWYIIKKFIGTYIYAILLIISIAIVFDFNENLSKFTQYHAPWRAIIFDYYANFVPY 76 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + G S L++P + +L++ F + Sbjct: 77 YSNLFSPLFVFIAVIFFTSKLAGNSEIISMMAAGVSIRRLMRPYMISCVLIAGLTFYLNS 136 Query: 120 IIEPKC---RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFI 175 + P R + L ++ + ++ LF + + I Y+ G + Sbjct: 137 FVIPHGTVIRQNFESLYRNSKKNTSAENVQ--LF--VAKNTTAYIQHYDDQYKRGYGFSL 192 Query: 176 VDSRDTQTHKIYYAQS---GSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 V +++ + A ++ + +++ ++ + + I K L E Sbjct: 193 VKTKNKKIVSHMTAMEIQYDTVADTKYHWKVSNWKIRTLKGLKEHIQSGASKDTVLLMEP 252 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + + LLN + + Y EFHKR+ I +I + Sbjct: 253 TDLVYSKGQQETFTSPELLNYISKQTSRGSGNVVQYEVEFHKRIAMSFSSFILTIIGLSL 312 Query: 293 ADKRALVRQRKKIHPIFISLSISFG-VFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + ++ R+ + I L++SFG + I+ + I ++ + I Sbjct: 313 SSRK---RKGGMGLYLGIGLALSFGYIMLQTVSATFAIQDDTPPILAAWIPNIIFAIIAY 369 Query: 352 L 352 Sbjct: 370 F 370 >gi|253991456|ref|YP_003042812.1| hypothetical protein PAU_03983 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782906|emb|CAQ86071.1| similar to putative membrane protein yjgq of escherichia coli [Photorhabdus asymbiotica] Length = 358 Score = 94.3 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 53/358 (14%), Positives = 128/358 (35%), Gaps = 4/358 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI R I ++ LM+ +V ++ +I+ + ++ V + + +P + Sbjct: 3 GVLDRYIGRTILQTILMTLFMLVSLSGIIKFVDQLRKVGQGEYTTISAGLYALLSVPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ +EL+++ +G +R+ + V+ AI L I I + Sbjct: 63 QIFFPMAALLGALLGLGALATRSELVVMQASGFTRMQVAGSVMKTAIPLVILTMIIGEWV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI-VDSRD 180 P+ + A+ + + ++ + D +I I + + ++G+ I + D Sbjct: 123 APQGEQMARNYRAQKMFGGSLVSTTKGMWAKDGAD-FIYIQRVMSDTEIKGVNIYHFNDD 181 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-DISIMKFKSYTLQTESANSSTIV 239 + + YA S D + L+ E + K S + + + Sbjct: 182 KKLLSVKYADSAVYDENNDLWKLSQVEESDLTDSKKITGSQRISADWKTRLTPEQLGVVA 241 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L ++S L + + Y+ K++ L + L+++ Sbjct: 242 LDPEALSISGLY-QYISYLKQSEQESGRYQLNMWKKIFAPLSVAVMMLMALSFIFGPLRT 300 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I+L F + + + P + L L ++ L++K++ Sbjct: 301 VPMGVRIITGITLGFLFYLLNEIFGPLSLVYSMPAVLAALLPSLLFLTLSIYLLLKRQ 358 >gi|332280200|ref|ZP_08392613.1| YjgP/YjgQ permease [Shigella sp. D9] gi|332102552|gb|EGJ05898.1| YjgP/YjgQ permease [Shigella sp. D9] Length = 386 Score = 94.3 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 58/366 (15%), Positives = 130/366 (35%), Gaps = 26/366 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 28 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 87 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 88 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 147 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 148 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 207 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK--------FKSYTLQTE 231 YA+S +I+ D+ IL+ G H+K K+ F S L Sbjct: 208 DLSLESYIYARSATIEDDKT-WILH-GVNHKKWLNGKETLETSDNLAWQSAFTSMDLDEL 265 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S +T ++ + + +L + YR ++L Q + + L+++ Sbjct: 266 SMPGNTFSVRQLNHYIHYL--------QETGQPSSEYRLALWEKLGQPILTLAMILLAVP 317 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-----FLFCI 346 + R + + + + + + +++ P+ L F+ Sbjct: 318 F--TFSAPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPIAFVLVA 375 Query: 347 SSIFLL 352 S+ Sbjct: 376 LSLVYW 381 >gi|281356604|ref|ZP_06243095.1| permease YjgP/YjgQ family protein [Victivallis vadensis ATCC BAA-548] gi|281316731|gb|EFB00754.1| permease YjgP/YjgQ family protein [Victivallis vadensis ATCC BAA-548] Length = 419 Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 42/355 (11%), Positives = 106/355 (29%), Gaps = 62/355 (17%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YILR + + L V + + + + I+ + S +L+ GY +P Sbjct: 1 MPKLDGYILREFLIKYSVLLLVFVILFILSDVYRDISDFLEAKASYRSILQYLGYKLPGN 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + + + +N E+ + +G S + + ++++ Sbjct: 61 VRFILPISMLLGCMWTMATFGKNMEITAMRASGVSLFRCGGSIFVVGLIVTAVNIYFNEA 120 Query: 121 IEPKCRSTIKQLSAKAQ---------------------------LALTFSYLEENLFFRL 153 + P +++ ++ + F+ Sbjct: 121 LVPYTERRAEEIRSEVADGRKYVQNLLTYRSTDQQRHWLFKTFTTDEAQQNVTVKTFWTD 180 Query: 154 D--DDLYIKISKYNPNNTLQGIF-------IVDSRDTQTHKI----------YYAQSGSI 194 DD+ + + ++ +F + SR+ + +I ++A S Sbjct: 181 GMIDDIVLGAGDAEFDALIRQMFRLKADRILALSREERAKEIRKELKGRKVDFFANRVSY 240 Query: 195 DLDRQAIILNDGEVHRKSPISKD----------------ISIMKFKSYTLQTESANSSTI 238 D ++A +DG + + F + + Sbjct: 241 DAGKKAWTFSDGNFTSYDRNDETKFEASRGTSTMHDPQPYKSIVFNEKEIPEAPDDIMNS 300 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + + +D + + N N + Y + F+ RL + + I A Sbjct: 301 IKEKDDLPTLVIWDLVRRNDNMPDRVYSIYMTVFYYRLAFPWACFLAVFLGIPLA 355 >gi|157162459|ref|YP_001459777.1| YjgP/YjgQ permease [Escherichia coli HS] gi|188495921|ref|ZP_03003191.1| putative permease, YjgP/YjgQ family [Escherichia coli 53638] gi|209920455|ref|YP_002294539.1| hypothetical protein ECSE_3264 [Escherichia coli SE11] gi|300815539|ref|ZP_07095763.1| conserved hypothetical protein [Escherichia coli MS 107-1] gi|157068139|gb|ABV07394.1| putative permease, YjgP/YjgQ family [Escherichia coli HS] gi|188491120|gb|EDU66223.1| putative permease, YjgP/YjgQ family [Escherichia coli 53638] gi|209913714|dbj|BAG78788.1| conserved hypothetical protein [Escherichia coli SE11] gi|300531468|gb|EFK52530.1| conserved hypothetical protein [Escherichia coli MS 107-1] gi|320201893|gb|EFW76468.1| Permease Ygh-P2, YjgP/YjgQ family [Escherichia coli EC4100B] gi|323183568|gb|EFZ68965.1| hypothetical protein ECOK1357_3348 [Escherichia coli 1357] gi|323946694|gb|EGB42715.1| YjgP/YjgQ permease [Escherichia coli H120] gi|324018178|gb|EGB87397.1| hypothetical protein HMPREF9542_03233 [Escherichia coli MS 117-3] gi|324119791|gb|EGC13671.1| YjgP/YjgQ permease [Escherichia coli E1167] Length = 359 Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 58/366 (15%), Positives = 129/366 (35%), Gaps = 26/366 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK--------FKSYTLQTE 231 YA+S +I D+ IL+ G H+K K+ F S L Sbjct: 181 DLSLESYIYARSATIKDDKT-WILH-GVNHKKWLNGKETLETSDNLAWQSAFTSMDLDEL 238 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S +T ++ + + +L + YR ++L Q + + L+++ Sbjct: 239 SMPGNTFSVRQLNHYIHYL--------QETGQPSSEYRLALWEKLGQPILTLAMILLAVP 290 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-----FLFCI 346 + R + + + + + + +++ P+ L F+ Sbjct: 291 F--TFSAPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVA 348 Query: 347 SSIFLL 352 S+ Sbjct: 349 LSLVYW 354 >gi|260891452|ref|ZP_05902715.1| permease, YjgP/YjgQ family [Leptotrichia hofstadii F0254] gi|260858835|gb|EEX73335.1| permease, YjgP/YjgQ family [Leptotrichia hofstadii F0254] Length = 153 Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 27/152 (17%), Positives = 54/152 (35%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI + + FI + I++ + + +S ++ Y IP V Sbjct: 1 MKIIDRYIYNSLFLPSIFGISIFTFIMMLNVIMEVMERLFASDLPFISIIDYLFYAIPGV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + V ++ E++ ++ +G +I+P I+L++ E Sbjct: 61 LVQTIPMGAFLGVMLVYGGLSETNEIVAMEGSGIGLFRIIRPAFIFGIILTLIGLGLEIY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFR 152 + P+ K T + FF Sbjct: 121 VNPRALKKYKCTDKTNSSFKTKFIVRRKSFFD 152 >gi|118594057|ref|ZP_01551404.1| hypothetical protein MB2181_00275 [Methylophilales bacterium HTCC2181] gi|118439835|gb|EAV46462.1| hypothetical protein MB2181_00275 [Methylophilales bacterium HTCC2181] Length = 344 Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 52/348 (14%), Positives = 118/348 (33%), Gaps = 9/348 (2%) Query: 13 GRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAME 72 M ++ + +Q I + ++ + IP + P + Sbjct: 1 MIGIFMIMFGLISLFAFFDFIQEIGDLGKGGYGISHAMTFVILSIPGHIYETVPLAVLIG 60 Query: 73 TTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQL 132 + + ++ N+EL +I +G S + ++ +IF + ++I P +Q+ Sbjct: 61 SMYTIGQLSYNSELNVIRASGFSIKKIATSLMITGGFFAIFTLLIGDLIAPNSEKNAQQM 120 Query: 133 SAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SRDTQTHKIYYAQS 191 ++ F+ D ++ I P+ TL+ I I + I A+ Sbjct: 121 KIGLTNSVVGQEFSSG-FWIKDGGNFVNIENVLPDATLERINIYEFDSQFNLRTIVNAEK 179 Query: 192 GSIDLDRQAII-LNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFL 250 G+ + + + ++ S K I + +KS ++ + ++ SF Sbjct: 180 GAYEEGEWRLENITQTILYENSVKKKSIPMGSWKS----LMRPEMMNALIISPEKMSSFN 235 Query: 251 LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFI 310 L + + Y +++ L P++ + ++ + R K +FI Sbjct: 236 LYKFISYLKINNQKSTKYEVALWEKIIHPLMPLVMIIFAVPFGFLQE--RSGGKFFKMFI 293 Query: 311 SLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + I + I H N + I L I L + K++ Sbjct: 294 GIIIGIAYQITNTLIRHLSLLNDWQPFISSLVPTLIFLCLGLYLIKRF 341 >gi|281422528|ref|ZP_06253527.1| putative membrane protein [Prevotella copri DSM 18205] gi|281403352|gb|EFB34032.1| putative membrane protein [Prevotella copri DSM 18205] Length = 413 Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 57/364 (15%), Positives = 131/364 (35%), Gaps = 14/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 +K + YI++ + S I+ IA V + ++ + I+ +P Sbjct: 53 IKKLDWYIIKKFLGYYFFSIALIISIAIVFDFNENLSKFTEHHAPARAIIFDYYANFVPY 112 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + + + T + N+E++ I +G S L++P + +LLS F Sbjct: 113 FANLFSALFVFVAVILFTTKLASNSEIIAILASGVSFKRLLRPYMITCVLLSALSFGLSA 172 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQ---GIFIV 176 + P + I+Q + EN+ ++D + + Y +N+++ G + Sbjct: 173 YVIPHG-TVIRQNFETMYKNKKKNTSAENVQLQVDKGVIAYMQHY--DNSMKRGYGFCLD 229 Query: 177 DSRDTQTHKIYYA---QSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 +D + A Q +I + L++ ++ + + + I+ K + E Sbjct: 230 KFQDKKLVSHLTAMDIQYDTISDSKYHWKLSNWKIRKLQGMKEHITSGAQKDTIIMMEPT 289 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + + L + N + Y E+HKR+ I +I + + Sbjct: 290 DLVYSKGQQETFTSPELRDYISKQINRGSGNVVQYEVEYHKRIASSFASFILTIIGVSLS 349 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY-IPILYLFLFCISSIFLL 352 ++ R+ + + L++SFG + Q + + +L F + + Sbjct: 350 ARK---RKGGMGAALGVGLALSFGYIMLQTVSATFAIQANFPSVLAAWLPNFLFAIVAYF 406 Query: 353 MIKK 356 +K Sbjct: 407 CYRK 410 >gi|86150264|ref|ZP_01068491.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni CF93-6] gi|88597526|ref|ZP_01100760.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 84-25] gi|218562454|ref|YP_002344233.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85839380|gb|EAQ56642.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni CF93-6] gi|88190118|gb|EAQ94093.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 84-25] gi|112360160|emb|CAL34954.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284926071|gb|ADC28423.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni IA3902] gi|315927714|gb|EFV07043.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 341 Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 63/329 (19%), Positives = 120/329 (36%), Gaps = 24/329 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+L + L + I ++ +Q L SS S LLK+ G+++P + Sbjct: 1 MKLSLRYVLNQFLSTNLSIFFVLFAIVSMVFFIQLAKLTSSIEISFLDLLKLYGFMLPRI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P F + T L +++ E +++ G S + L K L +A L+S F+ + + Sbjct: 61 LIFTLPISFFISLTLALFRLSKENESIVLFTLGFSPMILAKFFLKIASLISAFMLVVALV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV--DS 178 + P ++ + + F + D I I K + + + I + Sbjct: 121 MIPIVF-ELQDNFVNYKSTQVKFNYKTGEFGQKFLDWMIFIEKQDSD-KYENIIMYRPKH 178 Query: 179 RDTQTHKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE--SAN 234 + ++ A+ + D A LN G+++ S +F + + T+ + N Sbjct: 179 KADDKEQLIIAKEAHVQRKDDSFAFSLNQGKMYNFEQGQSIFS-GEFDTLVVNTQFNTDN 237 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 T +L+ L Y T LFP+ L ++ Sbjct: 238 LQTKKFYEYWNDLNENLQRAREFVIYT---------------TIALFPLASTLFALCFGL 282 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFS 323 + +F ++I FG+ FS Sbjct: 283 VTYRYEKGYVYLGMFGVIAIYFGLLSSFS 311 >gi|325983221|ref|YP_004295623.1| permease YjgP/YjgQ family protein [Nitrosomonas sp. AL212] gi|325532740|gb|ADZ27461.1| permease YjgP/YjgQ family protein [Nitrosomonas sp. AL212] Length = 352 Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 55/353 (15%), Positives = 122/353 (34%), Gaps = 10/353 (2%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 YI + FL++ I+ + +L +++ V T + + L+P Sbjct: 2 IYRYISGQVLIGFLIAIAVILPLFSFFDLLDQLDDVGRGTYHITDAFLYTTMLLPRRFIQ 61 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 + PF + T L + ++EL+ + G S + L + ILL + + I E I P Sbjct: 62 IAPFVALLGTVTALGKLAVHSELIAMRVAGLSPWRISLAPLSVGILLLLGVAILEQFIAP 121 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A A ++ R + ++ ++I + NN I I+ + Sbjct: 122 QLQQKAITYRAIALEQSAELGRNLGIWTRNEKNI-LRIGQIISNNKAAAIEILQLDEEGF 180 Query: 184 HKI-YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 AQ+ I D + L++ V + ++ ++ + +T+ Sbjct: 181 LAAHVLAQTAEIV-DNETWELSNVIVRTFANNQITVAHHTTLHWSSFVSPEDIATLTKPP 239 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + L + ++Y +++ L + L+SI + Sbjct: 240 ESLSPLELFRH-VEFLRSTGQEADSYALALWRKIGSALMTIAMLLLSIPFVFG---SIRS 295 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHK---IEQNPYYIPILYLFLFCISSIFLL 352 + + + I V+ I + ++ NP I + F + + L Sbjct: 296 GLSNKLVFASLIGIAVYLLDQIIANAGLILQLNPALIALAPGFTIIMVANVWL 348 >gi|83596032|gb|ABC25390.1| predicted permease YjgP/YjgQ family superfamily [uncultured marine bacterium Ant39E11] Length = 359 Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 55/365 (15%), Positives = 118/365 (32%), Gaps = 14/365 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YIL +F + I+ IA V + Q+++ + +L +L Sbjct: 1 MNRVDRYILSKFLGNFALFMGLIMLIAMVFDVSQKLDDFMDNDLNLATILLDYYLNFIAF 60 Query: 61 LPMVTP-FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + T M E+ + G S L++P L A ++ + + Sbjct: 61 YGNTFSALILFLSTVFFTARMANQGEISAMLTGGLSFGRLMRPYLIGAAVICLASASLSH 120 Query: 120 IIEPKCR-STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 I P S I A Q +T + +L ++ +I + ++P+ F + Sbjct: 121 FIIPGTNSSRIAFEEAYIQHRVTSRPI--HLHRQVLPGHFIYVETWSPDRMGGYNFTYEH 178 Query: 179 RDTQTHKIYY-AQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT--LQTESANS 235 + A D + + +++ R+ + +S+ Sbjct: 179 FEQGRMVDRLKASFIKYDSAKTSWHMDN-WTLRQWQSNGHMSLTSGVRLDSSFAFLPQQF 237 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 S+ L E + Y E+++R L I LI+ A Sbjct: 238 SSNNRGIETMTSPELYKALKQVRLSGSEAVLFYEMEWYRRSAYPLSAFILVLIAAAMA-- 295 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSY-IIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R ++ I+L + V + F + + P++ +++ I + + M+ Sbjct: 296 ---SRSQRGGIGAQIALGLLVAVLYIFLMQLSSTLASTHVTSPLVAVWVPNILFLGVAML 352 Query: 355 KKKYT 359 + Sbjct: 353 AYRRA 357 >gi|323436074|ref|ZP_01050240.2| predicted permease YjgP/YjgQ family [Dokdonia donghaensis MED134] gi|321496389|gb|EAQ39255.2| predicted permease YjgP/YjgQ family [Dokdonia donghaensis MED134] Length = 358 Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 54/363 (14%), Positives = 128/363 (35%), Gaps = 11/363 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI++ +F+ + + I ++ + ++I+ + ++ + Sbjct: 1 MKILDWYIVKRYIGTFVTMLVLFIPIGIIVNLAEKIDKILANEVPFGEVALYYLNFTIYF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + + + NTE++ ++G S ++P L A ++ F+ Sbjct: 61 ANLLFPLFLFLSVIWFTSKLANNTEVIAFLSSGVSFTRFLRPYLIGATVVCAGAFVMGTY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ + + +++ ++D YI S +NP F + + Sbjct: 121 LAPRANKGYNEFIFEYLKKKKNDRDTRDVYRQIDAGDYIYASSFNPRTKRGRNFTWEHFE 180 Query: 181 TQTHKIYY-AQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK-SYTLQTESANSSTI 238 A + + L G R D+ I + K T + + + + Sbjct: 181 GNKMTYKMSATQIRFNEEDTTYTLY-GFKKRIIGEDGDVLIKQAKIDTTFAFDIDDLTPV 239 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 A N L + Y KR + + I +I++ A+ Sbjct: 240 EYIAETLNTPELREFIAKEKARGSSYISRYEVTLQKRYSLPVAAYILTIIAVAV---SAM 296 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF----LFCISSIFLLMI 354 R+ + + ++F VF F + + + + P++ ++ LF I + +LL Sbjct: 297 KRRGGMGINLAFGIVLAF-VFIFFDKVFGTLAEQSDFPPLVAVWTPNILFAILAAYLLQN 355 Query: 355 KKK 357 K+ Sbjct: 356 AKR 358 >gi|218555553|ref|YP_002388466.1| hypothetical protein ECIAI1_3128 [Escherichia coli IAI1] gi|218362321|emb|CAQ99943.1| conserved hypothetical protein; putative membrane protein [Escherichia coli IAI1] Length = 386 Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 58/366 (15%), Positives = 129/366 (35%), Gaps = 26/366 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 28 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 87 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 88 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 147 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 148 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 207 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK--------FKSYTLQTE 231 YA+S +I D+ IL+ G H+K K+ F S L Sbjct: 208 DLSLESYIYARSATIKDDKT-WILH-GVNHKKWLNGKETLETSDNLAWQSAFTSMDLDEL 265 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S +T ++ + + +L + YR ++L Q + + L+++ Sbjct: 266 SMPGNTFSVRQLNHYIHYL--------QETGQPSSEYRLALWEKLGQPILTLAMILLAVP 317 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-----FLFCI 346 + R + + + + + + +++ P+ L F+ Sbjct: 318 F--TFSAPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVA 375 Query: 347 SSIFLL 352 S+ Sbjct: 376 LSLVYW 381 >gi|327402663|ref|YP_004343501.1| permease YjgP/YjgQ family protein [Fluviicola taffensis DSM 16823] gi|327318171|gb|AEA42663.1| permease YjgP/YjgQ family protein [Fluviicola taffensis DSM 16823] Length = 373 Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 58/380 (15%), Positives = 130/380 (34%), Gaps = 31/380 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 +K + YI+R +F I+ +A V I +R++ S I+ + Sbjct: 2 LKILDRYIIRKFLSTFFFMLGIIMLLAMVFDIAERLSDFIEKQASFKAIVFDYYLNFLLY 61 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + + M ++ E++ + +G I +I+P + A +L + + + Sbjct: 62 YGNTFSSMIVFIAVIWFTAKMAQDAEIIPMLFSGRPFIRIIRPYMIAATILMLLSLVLNH 121 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P+ L EN + + S YN + F+++ Sbjct: 122 FVLPRANRVRLDFEESFYRD---RLLVENYNAEFPGNELVHYSTYNSEENMINDFVIERY 178 Query: 180 DTQTHKIYY--AQSGSIDLDRQAIILNDGEVHRKSPISKD----------ISIMKFKSYT 227 D+Q I++ A++ S+ + L D + S I + Sbjct: 179 DSQNRLIHFMKARTASVIPGVKRWRLTDVFERKVSYSDTSGTSKGEMESIIQKHQLTENH 238 Query: 228 LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLET-----YRSEFHKRLTQWLFP 282 L+ + + + D + + ++ + + Y E ++R + Sbjct: 239 LKDTTLPYNVDDIAVRDNVVEAMTFRELSSFIAKEKAKGNPSVAMYEIELYQRSSYPFAT 298 Query: 283 VIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP---IL 339 + LI + R+++ I I++ + F + F+ I + P + Sbjct: 299 YVLTLIGVSV-----SSRKKRGGIGINIAIGLLFVFIYIFAMKITTVAATTVGFPSVAAV 353 Query: 340 YL--FLFCISSIFLLMIKKK 357 +L +F I ++FL I K Sbjct: 354 WLPNVMFGILALFLYRIAPK 373 >gi|251791279|ref|YP_003006000.1| permease YjgP/YjgQ family protein [Dickeya zeae Ech1591] gi|247539900|gb|ACT08521.1| permease YjgP/YjgQ family protein [Dickeya zeae Ech1591] Length = 356 Score = 93.9 bits (232), Expect = 4e-17, Method: Composition-based stats. Identities = 44/357 (12%), Positives = 120/357 (33%), Gaps = 4/357 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + YI + I + +M+ +V ++ +I+ + ++ V S+ + +P + Sbjct: 3 RVLDRYIGKTIFNTIMMTLFMLVSLSGIIKFVDQLRKVGQGGYSVMGAGLYTLLSVPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ +EL+++ +G +R+ + V+ AI L + + Sbjct: 63 EIFFPMAALLGALLGLGTLATRSELVVMQASGFTRLQIAGSVMKTAIPLVLLTMAIGEWV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI-VDSRD 180 P + ++ + + L+ + +D ++ I + + L G+ I + Sbjct: 123 APAGEQMARNYRSQMMYGGSMLSTQSGLWAKDGND-FVYIQRVAGESELLGVNIYHFDKQ 181 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + YA S + + + + + + L Sbjct: 182 NKLLSVRYAASAVYENGGWKLSQVEESDLSDGKQIGGSQTVS-GEWKTNLTPDKLGVVAL 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + + ++ L + N + Y+ +L L + L+++ Sbjct: 241 EPDALSIRGLYD-YINYLRQSGQEASRYQLNMWSKLFAPLSVAVMMLMALSFIFGPLRSV 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I IS F V + + P + + +L++K++ Sbjct: 300 PAGMRIVIGISFGFLFYVLDQIFGPLSLVYHIPPVLGASLPSALFLFISIMLLLKRR 356 >gi|206602448|gb|EDZ38929.1| Putative permease, YjgP/YjgQ family [Leptospirillum sp. Group II '5-way CG'] Length = 362 Score = 93.9 bits (232), Expect = 4e-17, Method: Composition-based stats. Identities = 64/369 (17%), Positives = 126/369 (34%), Gaps = 19/369 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ YI + + FL+ + + I VI +++I S +L ++ + Y V Sbjct: 1 MRILTRYIASELFKIFLLCFISLEAIYGVIDSVEKIKDFLSHHAALPLIGQYFFYRSIEV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 V P + T L +++N EL I G S + KP L L +L+S+ Sbjct: 61 SFRVLPMSGLLATLLTLGILSKNHELTAIRAAGISLVKATKPFLALGVLISLISIAMNYQ 120 Query: 121 IEPKCRSTIKQLSAKAQLA-----LTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI 175 + P + ++ L F + D+Y + + + L + + Sbjct: 121 LVPYAY-QMTDYIKDVRIDQGKTGRVTFELNNVWFRHGNQDIYGARTIRDGGSELDKVVL 179 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 D+ H + + ++ + DG + R P + I F+ Sbjct: 180 YHL-DSTFHLSWQIDAKTLRYHQGLWSFRDGRLTRFLPD-GSLKIESFQKMDTTLTRRPV 237 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFH-KRLTQWLFPVIFGLISIVAAD 294 K ++ L P + E R ++ R FP+ L+ ++A Sbjct: 238 DFTYEKTR---MTHLSYPELDRYIALLEKSHLPREKYEVTRDAMIAFPIAAFLMVLMAIP 294 Query: 295 KR-ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL-----FCISS 348 RQ ISL +S +W + + + +P + + F +S Sbjct: 295 FGIREGRQVGIAKGFGISLLLSMS-YWTIYSLGLALGKGGVLLPWISAWFANMIVFFVSI 353 Query: 349 IFLLMIKKK 357 L++ + Sbjct: 354 SLFLLLNRS 362 >gi|160898976|ref|YP_001564558.1| permease YjgP/YjgQ family protein [Delftia acidovorans SPH-1] gi|160364560|gb|ABX36173.1| permease YjgP/YjgQ family protein [Delftia acidovorans SPH-1] Length = 369 Score = 93.9 bits (232), Expect = 4e-17, Method: Composition-based stats. Identities = 54/375 (14%), Positives = 133/375 (35%), Gaps = 26/375 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTES---LNILLKISGYLI 57 M+ + R I + L + + + ++ + V ++ + L I Sbjct: 1 MRVLRNLLYRDIIAAVGYVTLAFLALFFFFDLVDELRWVGRGGDNGYQITHALLFVVLRI 60 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 P+ L + P + T V+ +++E I+ +G ++ ++ L + + F + Sbjct: 61 PSHLYELMPITVLIGTIYVMARFAQSSEFTIMRTSGMGPWLALRTLMVLGLGFVLATFGT 120 Query: 118 ENIIEPKCRSTIKQL----SAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI 173 + + P + + + A+ T ++L+E + D + I + + Sbjct: 121 GDYLAPAAENAGQNIRAIHLAQLSRGATGAWLKE---RQGDHSIAINVRAIRGPGDFSNV 177 Query: 174 FIVDSRDTQTHKI-YYAQSGSIDLDRQAIILNDGEVHR-KSPISKDISIMKFKSYTL--- 228 I D +AQ+ + D ++ L E R K+ + +++ K +L Sbjct: 178 RIFDFDGQGRISAQIHAQAAQVSEDGESWTLQGVEASRLKAKADAGMVLLREKEDSLVWK 237 Query: 229 -QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGL 287 + S +LK + + L + + + Y EF +++ + ++ + Sbjct: 238 TGISAEMVSAALLKPDRMSTISLF-QYVRHLEANGQAAQKYEIEFWRKVFYPMSCLVMVV 296 Query: 288 ISIVAADKRALVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYI----PILY 340 +++ A R +F + F F YI +P+ +LY Sbjct: 297 LALPFA--YLHFRSGGIAAYVFGGVMAGISFFLLNNVFGYIGTLQTWSPWLTAAAPGLLY 354 Query: 341 LFLFCISSIFLLMIK 355 L + +L++ + Sbjct: 355 SLLSLTAFTWLVLRR 369 >gi|326336103|ref|ZP_08202275.1| permease YjgP/YjgQ family protein [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691612|gb|EGD33579.1| permease YjgP/YjgQ family protein [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 359 Score = 93.9 bits (232), Expect = 4e-17, Method: Composition-based stats. Identities = 58/369 (15%), Positives = 136/369 (36%), Gaps = 22/369 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL+ ++ L + I ++ ++ ++ + ++K + Sbjct: 1 MKIIDRYILKRYFLTYSALFLMFIPIGILVDFAEKNQKMTDNHAPTEAIIKYYANFVIHF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + + + TE++ + ++G S ++P + A +LS+F+ I Sbjct: 61 ANILFPIFLFLSVIWFTSKLAEKTEIVAMLSSGISYNRFLRPYFYGATILSVFVLIMGMF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P S + L+ L+ +++ + YI +S ++ NN F+++ D Sbjct: 121 VVPYS-SGVYNEFYGTYLSPNLYSKGSRLYNQVNKNEYIYVSSFDANNNQGSDFVLERFD 179 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILN-DGEVHRKSPISKD-ISIMKFKSYTLQTESANSST 237 + A + + HRK D + K L ++ + Sbjct: 180 GLKMTDKITASNIQWIENDSIKTYRLSYYTHRKVGEFDDIYEQVIQKDTLLNFKTTDLLP 239 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 I A +N L + Y +++R I +I + + Sbjct: 240 IEYAAETKNFFELNKFIAEERQKGSPNIRIYELVYYRRWAAIFNVFILTIIGVAV----S 295 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYI---------IHKIEQNPYYIPILYLFLFCISS 348 V++R + ++++FGV GFSY+ K P I+ +F + + Sbjct: 296 SVKKRG-----GMGVNLAFGVLIGFSYVFFERIFGIMAEKSGITPLMAVIIPNAMFALLA 350 Query: 349 IFLLMIKKK 357 ++++ ++ Sbjct: 351 VYMIRKSRR 359 >gi|298372644|ref|ZP_06982634.1| membrane protein [Bacteroidetes oral taxon 274 str. F0058] gi|298275548|gb|EFI17099.1| membrane protein [Bacteroidetes oral taxon 274 str. F0058] Length = 389 Score = 93.9 bits (232), Expect = 4e-17, Method: Composition-based stats. Identities = 52/346 (15%), Positives = 115/346 (33%), Gaps = 12/346 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPTV 60 + YI+R +F M + I+ I+ V ++++ S + + I+ IP Sbjct: 34 SILDRYIMRKYLSTFFMCIIMIISISVVFDYAEKVDDFSENNAPMRAIIFDYYFNFIPYF 93 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + TP + + M NTE++ + +TG S L+ P A L+ + F+ Sbjct: 94 ANLFTPLFAFISVIFFTSKMAYNTEIIAMLSTGMSFKRLLVPYFMSATLIGLMSFLLGGF 153 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 + P K + N+ L+ + +Y N N + Sbjct: 154 VIPASNKPRLDFEDKYYRKFRSELVT-NIQLELEPGVVAYFERYEENINRGYNFSLEKFE 212 Query: 180 DTQTHKIYYAQSGSIDLDRQA-IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + A+ ID+D L + + + +++ ++ + + Sbjct: 213 GKKLVSRLTAE--YIDMDSLYHWHLVNYVKRDFKGMREIMTMGDGLDSVIKMDPQDFFIT 270 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 A + L + + +E++ R +I LI + A Sbjct: 271 GEDAPQMTNTKLYQYLRRQKERGIPGAQKFENEYNNRFAMPFAALILTLIGVSLA----- 325 Query: 299 VRQRKKIHPIFISLSISF-GVFWGFSYIIHKIEQNPYYIPILYLFL 343 R+ + + + I+ ++ F + N +L ++L Sbjct: 326 SRKVRGGTGLHLGFGIALSAIYILFCTVSSMFAINGTMPSLLAIWL 371 >gi|206889444|ref|YP_002249741.1| putative permease, YjgP/YjgQ family [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741382|gb|ACI20439.1| putative permease, YjgP/YjgQ family [Thermodesulfovibrio yellowstonii DSM 11347] Length = 369 Score = 93.9 bits (232), Expect = 4e-17, Method: Composition-based stats. Identities = 55/265 (20%), Positives = 111/265 (41%), Gaps = 13/265 (4%) Query: 9 LRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFC 68 ++ R+FL+ + + ++ ++++I+ S ++ Y IP + + PF Sbjct: 11 IKDFVRTFLVLLFSMSCLLSIVGLIEKIDDFMPYKPSTTFFIEYGLYSIPRYIFYLIPFV 70 Query: 69 FAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRST 128 + + + + R+ E LI+ +G L+KP L L I++SI FI ++P+ Sbjct: 71 TLVTSLFIFSIGVRSREFLILSVSGGRLRGLLKPFLILGIVISIVGFIFGEFLQPEFTKK 130 Query: 129 IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQG-IFIVDSRDTQTHKIY 187 + + + S +++ LF R D IKI K++ + I ++ K Sbjct: 131 LNFMIEELTQKGKSS-IQKELFVRAKDGTVIKIGKFSQQQKKADEVKIFIIKNDALIKRI 189 Query: 188 YAQSGSIDLDRQAI---ILND---GEVHRKS----PISKDISIMKFKSYTLQTESANSST 237 +Q I+ D+ + I+ D G+V + P++ ISI FK + E + Sbjct: 190 DSQEAEIEQDQWKLKNSIVYDFVAGKVEKYDLMDYPLNLKISIAAFKDIK-KIEEFGIAE 248 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRP 262 ++ K + L NP + Sbjct: 249 LIQKRKELKKVGLSNPKIDTDISSR 273 >gi|313680814|ref|YP_004058553.1| permease yjgp/yjgq family protein [Oceanithermus profundus DSM 14977] gi|313153529|gb|ADR37380.1| permease YjgP/YjgQ family protein [Oceanithermus profundus DSM 14977] Length = 335 Score = 93.5 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 73/202 (36%), Gaps = 8/202 (3%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + Y+LR I +L+ L + + + + S + + ++ Y +P L + Sbjct: 2 LQRYLLREILTPYLLGTLLFIGLVTTDLLSSLSGVFLSRGTTWTQVGELVLYRMPYTLGV 61 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P L R++EL + G + + L+ PVL LA ++ +++ ++P Sbjct: 62 ALPLGLVFAVLVALARWIRDSELKAVYAAGIAPVRLLAPVLGLAAFVAAVAWVNAGWVKP 121 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN----NTLQGIFIVDSR 179 + ++ L + S + N + + P+ LQG+ +V Sbjct: 122 EAQARYDDLIYEIYYGHAPSGVLTNAAYAPQGLGVYYARRVYPDDAGGGRLQGVRVVTPD 181 Query: 180 DTQTHKIYYAQSGSIDLDRQAI 201 ++ A G + Sbjct: 182 GA----VWSADEGVWKDANWVL 199 >gi|257487385|ref|ZP_05641426.1| hypothetical protein PsyrptA_29198 [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 205 Score = 93.5 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 73/206 (35%), Gaps = 11/206 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLV--SSSTESLNILLKISGYLIP 58 M + YI + + + L I+ + + I+ + S T +L L P Sbjct: 1 MVKLDRYIGKSVLLAILAVLGIILGLV---SLFAFIDEMGDISDTYTLADALSYVMLTAP 57 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + P + L ++ ++EL I+ G S ++ V+ +LL + + Sbjct: 58 RRVYDTLPMAALIGCLIGLGTLASSSELTIMRAAGVSIGRIVWAVMKPMLLLMVAGVLVG 117 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF---I 175 + P + + + AQ + L+ D +I I+ PN + G+ Sbjct: 118 EYVAPYAENQAQAARSLAQGSGDAQSARHGLW-HRQGDEFIHINTVQPNGLMLGVTRYRF 176 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAI 201 D R T +A+ + D + Sbjct: 177 DDQRHMLTSS--FAKEANFKTDYWEL 200 >gi|118581151|ref|YP_902401.1| permease YjgP/YjgQ family protein [Pelobacter propionicus DSM 2379] gi|118503861|gb|ABL00344.1| permease YjgP/YjgQ family protein [Pelobacter propionicus DSM 2379] Length = 354 Score = 93.5 bits (231), Expect = 5e-17, Method: Composition-based stats. Identities = 52/356 (14%), Positives = 117/356 (32%), Gaps = 5/356 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y+ R +L L + + ++ ++++ + ++ L +P Sbjct: 1 MKIIDRYLGRSFASCWLSVNLILAGLLSFFELAKQLDDIGKGRYDVSDALLYVSLTLPGR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + + L + +N EL + G S + + A+L + L + Sbjct: 61 MLEMAPPSALLGSIIALGLLAKNQELTALRAGGISVQRIGWTFMKPAVLTLLVLLLGAQF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSR 179 I P T + L+ + + L F+ D+ +I + N I+ D+R Sbjct: 121 IIPTLEQTAWTRR-ETALSKSGTLLPRGGFWTRDERRFINLRTARDNGVQAVDIYEFDNR 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 D T I+ + I + L+ + + + ++ + Sbjct: 180 DALTGYIH-GRETRIGANGN-WELHHVLRKEITEQGDSVRALPRLVLPHLLTPQQTAALT 237 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L ++S L +N R + Y ++LT + ++S+ + A Sbjct: 238 LPPQTLSISELSG-TISNLQKREQNAGRYLLALWQKLTLPVITAAMIMLSLPLVCRPARS 296 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 I + F I Q + L+ L ++ +L + Sbjct: 297 ASLGWHIMIGAIFGVVFFYLNQILGYTGLILQVSPFWTTLFPALAVLAGGAILTRR 352 >gi|74316600|ref|YP_314340.1| hypothetical protein Tbd_0582 [Thiobacillus denitrificans ATCC 25259] gi|74056095|gb|AAZ96535.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC 25259] Length = 356 Score = 93.5 bits (231), Expect = 5e-17, Method: Composition-based stats. Identities = 46/368 (12%), Positives = 115/368 (31%), Gaps = 23/368 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+ + + L ++ + ++Q + + + + +P Sbjct: 1 MNLLARYLAGQVLAASGFMLLALLVLFAFFDVVQELGNL-RAGYGFGQATIVVLLNVPGH 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + T L + N+E ++ +G S + + + L++ + + Sbjct: 60 LYEILPVAALIGTLFALARLVGNSEYAVMRVSGLSNWRVAAYFGVIGVWLALLVLLLGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P ++ A ++ L+ + D +I + + P+NTL+GI I Sbjct: 120 VAPWSDQAAQRYKLSATRSVVAQQFRSGLWVK-DGSTFINVREVMPDNTLRGIEIYGFDQ 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILN---------DGEVHRKSPISKDISIMKFKSYTLQTE 231 A + + L DG ++S S++ Sbjct: 179 EGRLDWIRAAEIATWRGDKTWQLQTVVETRFSADGIRAQRSANLAWRSVLT--------- 229 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 +++L A ++ + L + + Y + I LI++ Sbjct: 230 -PEILSVLLVAPEKMSARALWRYIAHLKANGQKASRYELALWSKFISPFVIPIMMLIAMP 288 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI--PILYLFLFCISSI 349 A + R I + F + + + P ++ + L I+ Sbjct: 289 FAIQSPRARGTSVKVFFGILAGLGFHLLSRLFGHLGLLNDWPAFVVSALPLLIFLGIALA 348 Query: 350 FLLMIKKK 357 + + ++ Sbjct: 349 GIRWVDRR 356 >gi|325297714|ref|YP_004257631.1| permease YjgP/YjgQ family protein [Bacteroides salanitronis DSM 18170] gi|324317267|gb|ADY35158.1| permease YjgP/YjgQ family protein [Bacteroides salanitronis DSM 18170] Length = 371 Score = 93.1 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 58/354 (16%), Positives = 129/354 (36%), Gaps = 8/354 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 +K + YI+ ++ + I+ I+ V I + I+ ++ L I+ IP Sbjct: 13 LKRLDRYIIVKFLGTYFFAIALIISISVVFDINENIDRFINNKAPLEAIVFDYYLNFIPY 72 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + +TG S L+ P + A ++S F+ Sbjct: 73 YTNLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRLMVPYMISAAIISAVTFMLGT 132 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS- 178 + PK T + K + + Y N+ +D + + +Y N F +D Sbjct: 133 EVIPKGSVTRLKFEEKYKKKKSADYAR-NIQLEVDSGVVAYMERYENYNKTGYRFSLDKF 191 Query: 179 RDTQTHKIYYAQSGSIDLDR-QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 D + A+ + D I+ D + + + I+ + ++ E + Sbjct: 192 EDHKLVSHLTARRITYDTASYHKWIIRDYMIREMRGMKEVITRGERIDSIIKMEPQDFLI 251 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L ++ + E+H+R+ I I + + ++ Sbjct: 252 TRGQQETMTSPQLREYIQKQKQRGFANIKEFEVEYHRRIAMSFAAFILTAIGLSLSSRKV 311 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + + I L++SF + F I N P L +++ I +F+ Sbjct: 312 ---KGGMGLHLGIGLALSFS-YILFQTISATFAINGNMPPALAIWIPNILYLFI 361 >gi|296104923|ref|YP_003615069.1| lipopolysaccharide export system permease protein LptG [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059382|gb|ADF64120.1| lipopolysaccharide export system permease protein LptG [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 360 Score = 93.1 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 45/353 (12%), Positives = 131/353 (37%), Gaps = 20/353 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + + I++ ++ + + + L + +P Sbjct: 5 GVLDRYIGKTI---FTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVP 61 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L + + +EL+++ +G +R+ + V+ AI L + Sbjct: 62 KDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRLQVALSVMKTAIPLVLLTMAIG 121 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-D 177 + P+ + A+A + ++ L+ + + ++ I + ++ L G+ I Sbjct: 122 EWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGQN-FVYIERVKGDDELGGVSIYAF 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + + +A S D + + L+ E +P S ++ Sbjct: 181 NDERRLQSVRHASSAKFDPEHKQWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + ++S L N + Y+ ++ Q + + L+++ Sbjct: 241 VVALDPDALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPMSVAVMMLMALSFIFGP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 + + + + + G+ +GF + + ++Q + ++Y I ++ Sbjct: 300 --------LRSVPMGVRVVTGISFGFVFYV--LDQIFGPLTLVYGIPPIIGAL 342 >gi|213855150|ref|ZP_03383390.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 356 Score = 93.1 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 52/351 (14%), Positives = 123/351 (35%), Gaps = 12/351 (3%) Query: 14 RSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIPTVLPMVTPFCFA 70 F + + + + I++ ++ + + + L + +P + + P Sbjct: 10 TIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGNYDALGAGMYTLLSVPKDIQIFFPMAAL 69 Query: 71 METTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIK 130 + L + + +EL+++ +G +R+ + V+ AI L + + P+ + Sbjct: 70 LGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAPQGEQMAR 129 Query: 131 QLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV---DSRDTQTHKIY 187 A+A + ++ L+ + ++ ++ I + + L GI I D R + + Sbjct: 130 NYRAQAMYGGSLLSTQQGLWAKDGNN-FVYIERVKGDEELAGISIYAFNDQR--RLQSVR 186 Query: 188 YAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 YA S D + + L+ E ++P S ++ + L + + Sbjct: 187 YAASAKFDPEHKVWRLSQVDESDLQNPKQITGSQTVSGTWKTNLTPDKLGVVALDPDALS 246 Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 +S L N + Y+ ++ Q L + L+++ Sbjct: 247 ISGLHN-YVKYLKSSGQDAGRYQFNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPMGVRV 305 Query: 307 PIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 IS F V F + P +L F + S++L++ K Sbjct: 306 VTGISFGFVFYVLDQIFGPLTLVYGIPPIVGALLPSASFFLISLWLMLRKS 356 >gi|242240954|ref|YP_002989135.1| permease YjgP/YjgQ family protein [Dickeya dadantii Ech703] gi|242133011|gb|ACS87313.1| permease YjgP/YjgQ family protein [Dickeya dadantii Ech703] Length = 356 Score = 93.1 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 47/357 (13%), Positives = 124/357 (34%), Gaps = 4/357 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + YI + I + +M+ +V ++ +I+ + ++ V + S+ + +P + Sbjct: 3 RVLDRYIGKTIFNTIMMTLFMLVSLSGIIKFVDQLRKVGQGSYSVLGAGLYTLLSVPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ +EL+++ +G +R+ + V+ AI L + + Sbjct: 63 EIFFPMAALLGALLGLGNLATRSELVVMQASGFTRLQIAGSVMKTAIPLVLLTMAIGEWL 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI-VDSRD 180 P + ++ + + L+ + +D ++ I + N L G+ I Sbjct: 123 APPGEQMARNYRSQMMYGGSMLSTQSGLWAKDGND-FVYIQRVQGENELVGVNIYHFDNQ 181 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ + YA S + + + R + + + + L Sbjct: 182 SKLLSVRYAASAVYENGVWQLSQVEESDLRSNKQISGSQTIS-GEWKTGLTPDKLGVVAL 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + ++ L + N + Y+ +L L + L+++ Sbjct: 241 DPDALSIRGLYD-YINYLKQSDQEASRYQLNMWSKLFAPLSVAVMMLMALSFIFGPLRSV 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I IS F V + + + P + L + +L++K++ Sbjct: 300 PAGVRIVIGISFGFLFYVLDQIFGPLSLVYRIPPVLGALLPSALFLFISIMLLLKRR 356 >gi|167032003|ref|YP_001667234.1| permease YjgP/YjgQ family protein [Pseudomonas putida GB-1] gi|166858491|gb|ABY96898.1| permease YjgP/YjgQ family protein [Pseudomonas putida GB-1] Length = 353 Score = 93.1 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 50/361 (13%), Positives = 132/361 (36%), Gaps = 14/361 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + + L I+ +A + + ++ + S T ++ P Sbjct: 1 MAKLDRYIGQSVLMAILAVLGIILGLASLFAFIDEMSDL-SDTYTVMEAGNFVLLTAPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L S+ ++EL I+ G S ++ V+ ++L + + Sbjct: 60 LYEMLPMAALIGCLIGLGSLASSSELTIMRAAGVSIGRIVWAVMKPMLVLMLVGLLIGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + AQ + ++ R ++ Y+ I+ PN L G+ + Sbjct: 120 VAPVTENKAQADRSLAQGGGEAQSSKRGMWHRQGEE-YVHINAVQPNGLLLGVTRYRFDN 178 Query: 181 TQTHKI-YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + +A+ D +L D ++ + + + +T++ Sbjct: 179 ERKIVTSSFARRAQYQDDH--WLLADVRTTYFRGDHTEVVNAPQERWDVSLTPELLNTVI 236 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWL--FPVIFGLISIVAADKRA 297 L +++ L + + + + Y F ++ Q + ++ IS + R+ Sbjct: 237 LAPESLSITGLWD-YIHYLSDQGLNNARYWLAFWTKVLQPMVTAALVLMAISFIFGPLRS 295 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY-LFLFCISSIFLLMIKK 356 + ++ +F + + F G ++ Q + P+L + I ++ + + + Sbjct: 296 VTLGQR----VFTGVLVGFVFRIGQD-LLGPSSQVFGFPPLLAVVIPAGICALAGVWLLR 350 Query: 357 K 357 + Sbjct: 351 R 351 >gi|294637822|ref|ZP_06716094.1| membrane protein, YjgP/YjgQ family [Edwardsiella tarda ATCC 23685] gi|291089021|gb|EFE21582.1| membrane protein, YjgP/YjgQ family [Edwardsiella tarda ATCC 23685] Length = 356 Score = 93.1 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 124/357 (34%), Gaps = 4/357 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI R I + +M+ +V ++ +I+ + ++ V S+ + IP + Sbjct: 3 GVLDRYIGRTIFNTIMMTLFMLVSLSGIIKFVDQLRKVGQGDYSVAGAGLFTLLSIPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L + + +EL+++ G +R+ + V+ AI L + + Sbjct: 63 EIFFPMAALLGALLGLGMLAQRSELVVMQAAGFTRMQVASAVMKTAIPLVLLTMAIGEWV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + A+ + + L+ + D + +I IS+ + TL G+ I D Sbjct: 123 APQGDQAARNYRAQQMYGGSLLSTQGGLWAK-DGNQFIYISQVVNDRTLAGVSIYTLNDQ 181 Query: 182 QT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + YA + + D + + + E + +P S + + + Sbjct: 182 RKLTSLRYATAATFDGKQWKLTQVE-ESNLTNPEQITGSRTLTGVWKTNLTPDKLGVVAV 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + ++S L + + Y+ ++ L + L+++ Sbjct: 241 SPDSLSISGLYH-YVKYLQQSGQESNRYQLNLWSKIFAPLSVAVMMLMALSFIFGPLRSV 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I F V + + P I + ++ L++++ Sbjct: 300 PMGVRVLTGICFGFVFYVLDQIFGPMSLVYNVPPVIGAVLPSALFLAISIYLLLRRS 356 >gi|194431684|ref|ZP_03063975.1| putative permease, YjgP/YjgQ family [Shigella dysenteriae 1012] gi|194420040|gb|EDX36118.1| putative permease, YjgP/YjgQ family [Shigella dysenteriae 1012] gi|320180990|gb|EFW55911.1| Permease Ygh-P2, YjgP/YjgQ family [Shigella boydii ATCC 9905] gi|332086635|gb|EGI91775.1| hypothetical protein SB521682_3569 [Shigella boydii 5216-82] gi|332088218|gb|EGI93339.1| hypothetical protein SD15574_3351 [Shigella dysenteriae 155-74] Length = 359 Score = 93.1 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 57/366 (15%), Positives = 132/366 (36%), Gaps = 26/366 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + ++ +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVALMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK--------FKSYTLQTE 231 YA+S +I+ D+ +L+ G H+K K+ F S L+ Sbjct: 181 DLSLESYIYARSATIEDDKT-WVLH-GVNHKKWLNGKETLETSDNLAWQSAFTSMDLEEL 238 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S +T ++ + + +L + YR ++L Q + + L+++ Sbjct: 239 SMPGNTFSVRQLNHYIHYL--------QETGQPSSEYRLALWEKLGQPILTLAMILLAVP 290 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-----FLFCI 346 + R + + + + + + +++ P+ L F+ Sbjct: 291 F--TFSAPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPIAFVLVA 348 Query: 347 SSIFLL 352 S+ Sbjct: 349 LSLVYW 354 >gi|300973447|ref|ZP_07172203.1| conserved hypothetical protein [Escherichia coli MS 45-1] gi|301048206|ref|ZP_07195242.1| conserved hypothetical protein [Escherichia coli MS 185-1] gi|300299964|gb|EFJ56349.1| conserved hypothetical protein [Escherichia coli MS 185-1] gi|300410789|gb|EFJ94327.1| conserved hypothetical protein [Escherichia coli MS 45-1] gi|315291259|gb|EFU50619.1| conserved hypothetical protein [Escherichia coli MS 153-1] Length = 359 Score = 93.1 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 58/366 (15%), Positives = 130/366 (35%), Gaps = 26/366 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 GASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK--------FKSYTLQTE 231 YA+S +I+ D+ IL+ G H+K K+ F S L+ Sbjct: 181 DLSLESYIYARSATIEDDKT-WILH-GVNHKKWLNGKETQETSDYLAWQSTFTSMNLEEL 238 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S +T ++ + + +L + YR ++L Q + + L+++ Sbjct: 239 SMPGNTFSVRQLNHYIHYL--------QETGQPSSEYRLALWEKLGQPILTLAMILLAVP 290 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-----FLFCI 346 + R + + + + + + +++ P+ L F+ Sbjct: 291 F--TFSAPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVA 348 Query: 347 SSIFLL 352 S+ Sbjct: 349 LSLVYW 354 >gi|325285312|ref|YP_004261102.1| permease YjgP/YjgQ family protein [Cellulophaga lytica DSM 7489] gi|324320766|gb|ADY28231.1| permease YjgP/YjgQ family protein [Cellulophaga lytica DSM 7489] Length = 341 Score = 93.1 bits (230), Expect = 7e-17, Method: Composition-based stats. Identities = 57/343 (16%), Positives = 125/343 (36%), Gaps = 8/343 (2%) Query: 20 CLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTS 79 L V I ++ + ++I + + +L+ I + ++ P + + Sbjct: 2 LLLFVPIGVMLDLAEKIAKMVRNEAPTLEILEYYMNFIIYIGSLLFPIFLFLSIIFFTSK 61 Query: 80 MNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLA 139 + NTE++ I ++G S ++P A +++I +F+ I PK + K Sbjct: 62 LASNTEIVAILSSGVSFGRFLRPYFMGATIIAILMFVMAMFIVPKASLDYHEFIFKYLKK 121 Query: 140 LTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY--YAQSGSIDLD 197 N++ +L+++ ++ IS ++PN L F+++ D Y A S Sbjct: 122 GKKFQETTNIYNQLNENEFLYISSFDPNRQLGSNFVLEHFDNDDKLAYKLTASSIRWIPK 181 Query: 198 RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNN 257 L + I + + + + A +N+ L + Sbjct: 182 DTIYRLTGFTSRTVKGNVEVIEKKSRLDTIFDFKIDDLTPVSYVAETKNIFELNKFIEDQ 241 Query: 258 PNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFG 317 + TY +KR + I LI++ ++ R+ + + I+F Sbjct: 242 RKKGASNINTYVMAKYKRWALPVSAFILTLIAVSV---SSIKRRGGMGLNLAFGIVIAFV 298 Query: 318 VFW---GFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + F+ + K +P I+ +F I ++LL K+ Sbjct: 299 YIFFDRVFAILAEKAGLSPLIAIIIPNAIFAIIGLYLLKNAKR 341 >gi|319944263|ref|ZP_08018539.1| permease YjgP/YjgQ family protein [Lautropia mirabilis ATCC 51599] gi|319742558|gb|EFV94969.1| permease YjgP/YjgQ family protein [Lautropia mirabilis ATCC 51599] Length = 382 Score = 93.1 bits (230), Expect = 7e-17, Method: Composition-based stats. Identities = 53/386 (13%), Positives = 119/386 (30%), Gaps = 34/386 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+ R I + L + + ++ ++ + L + +P+ Sbjct: 1 MKLMARYLTREIAGGIMAVLLGFLGLFAFFDLINELDDIGQGGYRLPQAVLYVLLGLPSH 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + L +N+E + G SR ++ VL L +LL++ ++ Sbjct: 61 IYELMPVAALIGCIYALAQFAQNSEFTAMRAAGMSRQLALRGVLVLGVLLAVLTAVAGEW 120 Query: 121 IEPKCRSTIKQLSAKAQ-LALTFSYLEENLFFR----LDDD-----LYIKISKYNPNNTL 170 I P +QL L+ + D ++ I + L Sbjct: 121 IAPMAEQRAQQLRMDVLGKGSGVGAFRSGLWLKDSVRGPDGQRLQTRFVNIGTLEADGGL 180 Query: 171 QGIFIVD-SRDTQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKS 225 + I + D + + +A+ G L E R + + + + Sbjct: 181 SKVAIHEFDTDFRLTAVIHAEHGRYQPAHNGQASSWRLEGVETTRFNVSR---TQTGYDA 237 Query: 226 YTLQTESANSSTIVLK-----------ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHK 274 E + V A D+ + L ++ + Y K Sbjct: 238 LHAAVERRPETVWVSDLNPALLSVLAIAPDRMSALALWRYTSHLKENAQNANRYELALWK 297 Query: 275 RLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-- 332 ++ L ++ ++++ VR +F +S+ G + + N Sbjct: 298 KVVYPLAIIVMLMLALPFG--YLQVRAGGIGLKLFFGISLGVGFYIMNGLFSNLGLINTW 355 Query: 333 -PYYIPILYLFLFCISSIFLLMIKKK 357 P+ + LF ++ +L + Sbjct: 356 PPWLAVSIPSILFLALALVMLNRVGR 381 >gi|157368809|ref|YP_001476798.1| permease YjgP/YjgQ family protein [Serratia proteamaculans 568] gi|157320573|gb|ABV39670.1| permease YjgP/YjgQ family protein [Serratia proteamaculans 568] Length = 356 Score = 93.1 bits (230), Expect = 7e-17, Method: Composition-based stats. Identities = 49/359 (13%), Positives = 116/359 (32%), Gaps = 8/359 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI + I + +M+ +V ++ +I+ + ++ V + + +P + Sbjct: 3 GVLDRYIGKTIFNTIIMTLFMLVSLSGIIKFVDQLRKVGQGEYTALSAGMFTLLSVPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L + +EL+++ +G +R+ + V+ AI L + + Sbjct: 63 EIFFPMAALLGALLGLGQLATRSELVVMQASGFTRMQIAGSVMKTAIPLVLLTMAIGEWV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV---DS 178 P+ + A+ + + L+ + D +I I + L G+ I D Sbjct: 123 APQGDQMARNYRAQQMYGGSLLSTKNGLWAKDGTD-FIYIERVAGEKELSGVNIYHFNDQ 181 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 R + + YA S S + + D + + + Sbjct: 182 R--RLETVRYAASASFEDGVWKLSQVDTSDLTNEKQVTGTQTLT-GEWKTNLTPDKLGVV 238 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 L ++S L N + Y+ ++ L + L+++ Sbjct: 239 ALDPTSLSISGLHN-YVKYLKQSGQEANRYQLNMWSKVFSPLSVAVMMLMALSFIFGPLR 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P + L + + +++K+K Sbjct: 298 SVPMGVRVVTGISFGFLFYVLDQIFGPLSLVYNMPPVLGALLPSMLFLLISVYMLLKRK 356 >gi|71908693|ref|YP_286280.1| permease YjgP/YjgQ [Dechloromonas aromatica RCB] gi|71848314|gb|AAZ47810.1| permease YjgP/YjgQ [Dechloromonas aromatica RCB] Length = 362 Score = 93.1 bits (230), Expect = 7e-17, Method: Composition-based stats. Identities = 47/362 (12%), Positives = 129/362 (35%), Gaps = 9/362 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + ++ Y++R S + + + + + V + S+ +P + Sbjct: 5 LNLYQRYLIRETFASVFLVLAAFLALFAFFNFIDELRTVGKAGYSVVHAALFVALSMPGL 64 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + T L+++ R++E+ ++ +G + L+ + A+LL++ F+ Sbjct: 65 VYELIPIATLIGTLYALSTLARHSEITVLRASGLATSDLLMTLFRAALLLALLTFVIGEA 124 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P K++ AKA + ++ + D +I I K P+ L+G+ I Sbjct: 125 VVPFSERLGKEIRAKALSTVIAQSGFDSGLWVKDGRSFINIRKAAPDEPLEGVRIYHFSQ 184 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + D L + + + + + +++ Sbjct: 185 QNLLESVTDAQAADFEDPDLWRLRGVVRTVLEGDTSRVESTQTGEWRSTVTPTLLAALMV 244 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 +L LLN + + + E Y K++ L ++ +++ + R Sbjct: 245 SPERMSLFGLLNYTKHLTENKQKT-ERYEIALWKKVVYPLAALVMVALALPFG--YSHNR 301 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-----FLFCISSIFLLMIK 355 IF + + +F+ + + + + PI+ +++ L ++ Sbjct: 302 VGGVSLKIFAGVMLGI-LFYALNGLSSNLGAINSWSPIISATAPSGLFLLVATGMLWWVE 360 Query: 356 KK 357 ++ Sbjct: 361 RR 362 >gi|226943299|ref|YP_002798372.1| YjgP/YjgQ family permease [Azotobacter vinelandii DJ] gi|226718226|gb|ACO77397.1| permease YjgP/YjgQ family [Azotobacter vinelandii DJ] Length = 353 Score = 92.7 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 54/365 (14%), Positives = 119/365 (32%), Gaps = 20/365 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + S L +V +A + + + V L +P Sbjct: 1 MGKLDRYIGASVSLSILAVLGVLVGLALLFSFVDELGDVQGD-YDLAAAAWYVFLTVPQR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L S+ ++EL +I +G S ++ V+ ++L + + Sbjct: 60 TYEMLPMGALIGCLIGLGSLASSSELTVIRASGISLGRIVWAVMKPMLVLMVLGGLLGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF---IVD 177 + P + + + AQ + L+ + ++ I+ P L G+ D Sbjct: 120 LAPWAENKAEAHRSLAQGGGEAQTAKHGLW-HRQGNEFVHINAVQPGGVLYGVTRYRFDD 178 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 R +A+ L D R S +++ + + + T Sbjct: 179 QRHMLWSS--FARKAEFRGGN--WQLEDVTTTRFLERSTEVAKAATEQWDILLSPQLLGT 234 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWL--FPVIFGLISIVAADK 295 +V+ +++ L + + Y F ++ Q L ++ IS + Sbjct: 235 VVMDPEALSVTGL-WHYIHYLAEQELNNARYWLAFWGKVLQPLVTAALVLMAISFIFGPL 293 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL---FCISSIFLL 352 R++ ++ + VF F ++ Q + P+L + L C L Sbjct: 294 RSVTLGQRLFTGVLAGF-----VFRMFQDLLGPSSQVFGFSPLLAVLLPAGLCALLGVYL 348 Query: 353 MIKKK 357 + + Sbjct: 349 LRRAG 353 >gi|332885237|gb|EGK05488.1| hypothetical protein HMPREF9456_02689 [Dysgonomonas mossii DSM 22836] Length = 664 Score = 92.7 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 82/205 (40%), Gaps = 4/205 (1%) Query: 17 LMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNV 76 +M+ +FI + + + + + +L ++ Y I ++P+ P + + Sbjct: 1 MMTFGICLFIVLMQFLWKFVEDLVGKGLDNVVLAELFMYAILNLIPLALPLSLLLASLMA 60 Query: 77 LTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKA 136 ++ ELL I G S + +KP++ +++ F +N P+ + ++ L Sbjct: 61 FGNLGERLELLAIKAAGVSLLKTMKPLIIFISCVAVGAFFFQNEAMPRIQVKLRSLMISI 120 Query: 137 QLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSRDT-QTHKIYYAQSG-- 192 + + E F+ + + + K + L+ + I D+ + ++ S Sbjct: 121 RQKSPELDIPEGSFYSGITNYSLYVKKKDKETRMLKDVMIYDTSEGFDNMSVFVCDSALM 180 Query: 193 SIDLDRQAIILNDGEVHRKSPISKD 217 SI ++ ++LN R + S+ Sbjct: 181 SISSNKDFLLLNLYSGQRFANFSQS 205 Score = 41.1 bits (95), Expect = 0.25, Method: Composition-based stats. Identities = 41/250 (16%), Positives = 95/250 (38%), Gaps = 14/250 (5%) Query: 118 ENIIEPKCRSTIKQLSAKAQLALTFSYLEENLF--FRLDDDLYIKISKYNP-NNTLQGIF 174 N P R K+ F ++E+ ++ +++ S + ++ L + Sbjct: 213 NNQFVPYSRENFKEKKIVIPFNSGFDRMDESNLEGTQISKNIFQLGSSIDSLSSRLDSVN 272 Query: 175 IVDSR--DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 + D + T+ Y ++ + L + E + K I+ + F S L T S Sbjct: 273 VHDRKVIGKNTYLTYRNSDAYKKVETEETALPNKEQAVEPLKKKTINTIDFDSL-LNTYS 331 Query: 233 AN--SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 + S + AN+ S + + ++ E+H++ +IF I Sbjct: 332 NDEISRYVGFAANEAESSRFNIMETTQKINMQKNIRMHKVEWHRKFVLSFACLIFFFIG- 390 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY--IPILYLFLFCISS 348 A A++R+ P+ +S+ + F V++ I +K+ ++ + ++L F + Sbjct: 391 --APLGAIIRKGGLGMPVVVSV-LLFIVYYIIDNIGYKMARDGVWEVWQGMWLSSFALFP 447 Query: 349 IFLLMIKKKY 358 + + + K Sbjct: 448 LGVFLTYKAM 457 >gi|325104566|ref|YP_004274220.1| permease YjgP/YjgQ family protein [Pedobacter saltans DSM 12145] gi|324973414|gb|ADY52398.1| permease YjgP/YjgQ family protein [Pedobacter saltans DSM 12145] Length = 364 Score = 92.7 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 57/358 (15%), Positives = 120/358 (33%), Gaps = 5/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 +K + YI+R +F+ + I+ V I ++++ S + + ++ + IP Sbjct: 8 IKLIDWYIIRKYLGTFVFTMAIFTLISVVFDISEKLDDFLKSRATFSQVVFEYYAGFIPF 67 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 L + P + M TE++ I +G S ++P A ++ IF Sbjct: 68 YLNFLNPLINFISVIFFTAKMADQTEIVPILTSGASFNRFLRPYFVAATVIFIFNIGFNL 127 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDS 178 + P+ + ++ + N+ +LD + YI + ++ N+ + Sbjct: 128 FVIPETNRLM--INFENTYTKIKDTSRNNVHLQLDSNTYIYMESFDNLRNSGYKFSLEKF 185 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + A S D + + + + + + K TL + + Sbjct: 186 DKKDLKEKLMADRISWDSVSHKWKIENYTIRYVDGLKEKMENGTVKDTTLDMKPIDFDIR 245 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + N L ++ E +KR T + LI + A R + Sbjct: 246 DNIYSAMNFWELNEKIEKEKIRGSGVMVNLELEKYKRWTYPFSTYVLTLIGV-ALSSRKV 304 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + I LS + +F F+ + P I +L + + L IK Sbjct: 305 RGGVGLPLGLGILLSFVYILFIQFANVFALKGGLPPIIAVLIPNMLFGALGVYLAIKA 362 >gi|170681358|ref|YP_001745244.1| YjgP/YjgQ permease [Escherichia coli SMS-3-5] gi|170519076|gb|ACB17254.1| putative permease, YjgP/YjgQ family [Escherichia coli SMS-3-5] Length = 359 Score = 92.7 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 58/366 (15%), Positives = 132/366 (36%), Gaps = 26/366 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTLAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK--------FKSYTLQTE 231 +A+S SI+ D+ IL+ G H+K K+ F S L+ Sbjct: 181 DLSLESYIFARSASIEDDKT-WILH-GVNHKKWLNGKETLETSDNLAWQSAFTSMDLEEL 238 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S +T ++ + + +L + YR ++L Q + + L+++ Sbjct: 239 SMPGNTFSVRQLNHYIHYL--------QETGQPSSEYRLALWEKLGQPILTLAMILLAVP 290 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-----FLFCI 346 + R + + + + + + +++ P+ L F+ Sbjct: 291 F--TFSAPRSPGVGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVA 348 Query: 347 SSIFLL 352 S+ Sbjct: 349 LSLVYW 354 >gi|167761789|ref|ZP_02433916.1| hypothetical protein BACSTE_00129 [Bacteroides stercoris ATCC 43183] gi|167700295|gb|EDS16874.1| hypothetical protein BACSTE_00129 [Bacteroides stercoris ATCC 43183] Length = 605 Score = 92.7 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 75/181 (41%), Gaps = 5/181 (2%) Query: 29 VIQIL-QRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELL 87 ++Q L + ++ + +N+L + Y T++P P + + ELL Sbjct: 1 MMQFLWKYVDEMVGKGLEMNVLAQFFFYSALTLVPASLPLAILLAALITFGNFGERFELL 60 Query: 88 IIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEE 147 + G S + +++P++ ++ F +N+I PK ++ + L + + E Sbjct: 61 AMKAAGISLLKIMRPLIIFISIICCVSFYFQNVIGPKAQTKLWTLLVSMKQKSPEVDIPE 120 Query: 148 NLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSRDT-QTHKIYYAQSGSID--LDRQAIIL 203 +F+ D + + N L + I + + +I + SG ++ D+Q + L Sbjct: 121 GVFYDEIDGYNLYVKHKNRKTGMLYDVLIYNFEKGFENAQIIKSDSGRLEMTADKQHLYL 180 Query: 204 N 204 + Sbjct: 181 H 181 >gi|154492560|ref|ZP_02032186.1| hypothetical protein PARMER_02194 [Parabacteroides merdae ATCC 43184] gi|154087785|gb|EDN86830.1| hypothetical protein PARMER_02194 [Parabacteroides merdae ATCC 43184] Length = 361 Score = 92.7 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 54/346 (15%), Positives = 118/346 (34%), Gaps = 10/346 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 +K + YI++ +++ + I+ I+ V I ++I+ S L I+ IP Sbjct: 5 LKRIDWYIIKQFLGTYIFAIALIIAISVVFDINEKIDKFLSPDVPLKAIVFDYYMNFIPY 64 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + +G S L+ P A ++++ F+ Sbjct: 65 FANLFSPLFTFIAVIFFTSKLADNSEVIAMLASGMSFRRLMLPYAISAGIIALSTFVLNA 124 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF-IVDS 178 I P +T K Y+ ++ + +Y+ + + F + Sbjct: 125 YIIPPANATRIDFQNKYIKNKKVDYVRSAQ-LEIEPGVIAYFDRYDARSGMGYRFSLEHF 183 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 D + A S D L D + + + I+ TL ++ Sbjct: 184 EDKKMISRLTANSIKYDSLYN-WTLIDYMIRDFDGMREHITEGSRMDTTLTIVPSDFLIS 242 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 V S L ++T++ E+HKR + I I Sbjct: 243 VNDCETMTSSELSTYIDRQKKRGIGNIQTFQIEYHKRFAAIMAAFILTSIG-----ASLS 297 Query: 299 VRQRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLFL 343 R+ K + I + ++ + F+ + N P + ++ Sbjct: 298 SRKIKGGMGLNIGIGLALSFSYILFTTVTSTFAINGNLSPAMAAWI 343 >gi|323173776|gb|EFZ59405.1| hypothetical protein ECLT68_2094 [Escherichia coli LT-68] Length = 359 Score = 92.7 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 57/366 (15%), Positives = 129/366 (35%), Gaps = 26/366 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I + G S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSMGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK--------FKSYTLQTE 231 YA+S +I+ D+ IL+ G H+K K+ F S L Sbjct: 181 DLSLESYIYARSATIEDDKT-WILH-GVNHKKWLNGKETLETSDNLAWQSAFTSMDLDEL 238 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S +T ++ + + +L + YR ++L Q + + L+++ Sbjct: 239 SMPGNTFSVRQLNHYIHYL--------QETGQPSSEYRLALWEKLGQPILTLAMILLAVP 290 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-----FLFCI 346 + R + + + + + + +++ P+ L F+ Sbjct: 291 F--TFSAPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFVLSAPVTALGLPIAFVLVA 348 Query: 347 SSIFLL 352 S+ Sbjct: 349 LSLVYW 354 >gi|265763912|ref|ZP_06092480.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|263256520|gb|EEZ27866.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] Length = 365 Score = 92.7 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 50/369 (13%), Positives = 132/369 (35%), Gaps = 19/369 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 +K +LYI++ +++ + I+ IA V ++++ + + I+ IP Sbjct: 7 IKRLDLYIIKKFLGTYVFAIALIISIAVVFDFNEKMDKFMERSAPWSAIIFDYYMNFIPY 66 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + +TG S +++P + A +++I FI + Sbjct: 67 FANLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMLRPYMISAGIIAISTFILGS 126 Query: 120 IIEPKC---RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + P+ R + K + ++ +D + I Y N F + Sbjct: 127 YVIPRGSVTRLDFEDKYVKKKKTTYVHNIQ----LEIDTGVIAYIDNYQDYNKTGNRFSL 182 Query: 177 DS-RDTQTHKIYYAQSGSIDLDR-QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 D D + A+S + D + D + + + +I++ Sbjct: 183 DKFVDKKLVSHLTARSITYDTTAVNKWTIKDYMIRNLDGLKE--TIVRGDKMDFIIPMEP 240 Query: 235 SSTIVLKANDQNLS--FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + ++++ + L+ L ++ + E+HKR+ I +I + Sbjct: 241 ADFMIMRNQQEMLTSPQLSAYIDKQKQRGIANIKEFEIEYHKRIAMSFASFILTVIGVSL 300 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF-LFCISSIFL 351 + + + + + F + N P++ ++ + ++ Sbjct: 301 ----SSRKTKGGMGLHLGIGLGLSFSYILFQTVASTFAVNGNMPPMIAMWIPNLLYALIA 356 Query: 352 LMIKKKYTK 360 + +K K Sbjct: 357 FYLYRKAPK 365 >gi|82524032|emb|CAI78710.1| hypothetical protein [uncultured Flavobacteriaceae bacterium] Length = 358 Score = 92.7 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 51/361 (14%), Positives = 124/361 (34%), Gaps = 6/361 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL+ +F M L + I + + ++I + + L ++ Sbjct: 1 MKILDWYILKRYLFTFFMMLLLFIPIGITVNLAEKIGKMLENEVPLKAIVIFYLNFTVHF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + + + NTE++ ++G S ++P + A ++ Sbjct: 61 AYLLFPLFLFLSVIWFTSKLANNTEVIAFLSSGVSFSRFLRPYMIGASIIGGLALFLGMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF-IVDSR 179 + P + K + + N+F +++D+ +I +S ++ NN L F + Sbjct: 121 LTPIASKGFNEFEYKYLYPNRKTTQDVNVFRQINDNEFIYVSSFDLNNKLGINFTLEHIE 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 D + A++ L D I ++ + K + + + ++ Sbjct: 181 DNKLTYKISAKTIKYIAKDTTYRLVDYVKRTVGKIEDELVFERNKDTLFAFDVEDLTPVI 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 A + L + Y +++ + + I +I++ ++ Sbjct: 241 YIAEILPYTELTKFIEKEKTRGSSNIGRYELVLYRKWSLPVSVFILTIIAVAV---SSIK 297 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN--PYYIPILYLFLFCISSIFLLMIKKK 357 R+ + I + I+ + EQ+ P I + + + F L+ K Sbjct: 298 RRGGMGVNLAIGICIAMVFVFFDKIFGVLAEQSNFPSIIAVWFPNVVFGILAFYLLRNAK 357 Query: 358 Y 358 Sbjct: 358 R 358 >gi|300725025|ref|YP_003714351.1| putative transmembrane protein, transport [Xenorhabdus nematophila ATCC 19061] gi|297631568|emb|CBJ92277.1| putative transmembrane protein, transport [Xenorhabdus nematophila ATCC 19061] Length = 359 Score = 92.7 bits (229), Expect = 8e-17, Method: Composition-based stats. Identities = 48/327 (14%), Positives = 119/327 (36%), Gaps = 12/327 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI R I ++ LM+ +V ++ +I+ + ++ V + + +P + Sbjct: 3 GVLDRYIGRTILQTILMTLFMLVSLSGIIKFVDQLRKVGQGEYTALSAGIYTLLSVPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ +EL+++ +G +R+ + V+ AI L + + + Sbjct: 63 QIFFPMAALLGALLGLGALATRSELVVMQASGFTRLQVAGSVMKTAIPLVLLTMVIGEWV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI-VDSRD 180 P+ + ++ + + L+ + D ++ I +N L G+ I + Sbjct: 123 APQGEQLARNYRSQKMFGGSLMSTTKGLWAKDGRD-FVYIQSVGKDNALNGVSIYHVDEN 181 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDI-SIMKFKSYTLQTESANSSTIV 239 + + YA S D D Q L+ E + + I S + Q + Sbjct: 182 RKLLSVKYAASAVYDKDNQQWKLSQVEESDLTKFGRIIGSQRVSAEWNSQLTPEKLGVVS 241 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L + ++ L + + Y+ K++ L + L+++ Sbjct: 242 LDPDALSIRGL-HQYITYLKLGQQDAGRYQLNMWKKVFAPLSVAVMMLMALSFIFGP--- 297 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYII 326 + + + + G+ GF + + Sbjct: 298 -----LRCVPMGFRVVVGISMGFLFYV 319 >gi|152990851|ref|YP_001356573.1| hypothetical protein NIS_1107 [Nitratiruptor sp. SB155-2] gi|151422712|dbj|BAF70216.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2] Length = 338 Score = 92.7 bits (229), Expect = 8e-17, Method: Composition-based stats. Identities = 56/358 (15%), Positives = 140/358 (39%), Gaps = 20/358 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+ + SFL L + IA +I ++ ++L S SL L K+ ++ P + Sbjct: 1 MPKLLRYLGNHLYESFLSYFLPLFGIASLIFFIKIVSLTSIVQLSLVDLAKLYIFITPQI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P F + L ++ + E + + G S +++ + LA+LLS+ LFI + Sbjct: 61 LFFTIPVVFFIAAVTALHKLSFDYETIAFFSLGISPTKIMRYLTLLAVLLSLLLFIIAYM 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ +++ + + L+ + + + ++ + K + NN + + + + D Sbjct: 121 LIPQG-KQLEKGFYRYKKTEANINLKPSEYGHKFGNWFVYVQKKDKNNLFENVVLYNF-D 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + ++ + D + + L + + + + + F L Sbjct: 179 NEQERFITSKKATFDNSQYGLKLTLYDGNAYTYKKGILDQITFTKMDL-----------F 227 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + ++P +Y + + F W+ + ++ + A + Sbjct: 228 DTSTSYYFQYIDP----IHYWEKAFLNKQRAFDMLFFLWIA--LLPVLGMPYAGMIGIHH 281 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 R +F+ + + +++GF++++ K + + L+ F +F I +Y Sbjct: 282 PRYHKGGVFLKVLFALFIYFGFAFLLSKTLYYYSLL-FMALWFFGGIYLFHKTIMSRY 338 >gi|167753885|ref|ZP_02426012.1| hypothetical protein ALIPUT_02170 [Alistipes putredinis DSM 17216] gi|167658510|gb|EDS02640.1| hypothetical protein ALIPUT_02170 [Alistipes putredinis DSM 17216] Length = 372 Score = 92.7 bits (229), Expect = 8e-17, Method: Composition-based stats. Identities = 46/359 (12%), Positives = 113/359 (31%), Gaps = 6/359 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPTV 60 K + YIL ++ + I+ + + +++I+ + + L I+ IP Sbjct: 14 KILDRYILGKFLSTYFFAIAMIIVVVVIFDYVEKIDNFTETKAPLKAIIFDYYLNFIPFF 73 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + + + M TE++ + + G S L+ P A++++ Sbjct: 74 INQFSGLFTFIAVIFFTSKMAYQTEIVAMLSGGMSFRRLMWPYFLGALIIASLSLGLNLW 133 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF-IVDSR 179 + P + + + ++N++ +++ + I Y+ + F + + Sbjct: 134 LIPVSQRSCVAFENQYIPRKARFQYDKNIYRQIEPGTFAYIRNYSKESNQASFFSLEEYE 193 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPIS-KDISIMKFKSYTLQTESANSSTI 238 A + + + + + + + + + Sbjct: 194 SGAMTASLEAAEVRFNPETKRWSARRYTTRTFDSLGVETFTQHRNLDTLINLDVNELGRT 253 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 N+ L + + + + E H R + I LI + Sbjct: 254 DQLIKTMNIVELNQFLEQQRSKGSDSINIIQVEQHARYAYPVGTFILTLIGVS--LSSRK 311 Query: 299 VRQRKKIH-PIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 VR +H I I+L S+ +F F K P +I + + + L K Sbjct: 312 VRGGTGLHIGIGIALCFSYILFIRFFEEFAKSGTLPPWIAVWIPNILYLCIAVYLYRKA 370 >gi|291284362|ref|YP_003501180.1| Permease YjgP/YjgQ family protein precursor [Escherichia coli O55:H7 str. CB9615] gi|290764235|gb|ADD58196.1| Permease YjgP/YjgQ family protein precursor [Escherichia coli O55:H7 str. CB9615] gi|320656363|gb|EFX24270.1| Permease YjgP/YjgQ family protein precursor [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661734|gb|EFX29142.1| Permease YjgP/YjgQ family protein precursor [Escherichia coli O55:H7 str. USDA 5905] gi|320666885|gb|EFX33861.1| Permease YjgP/YjgQ family protein precursor [Escherichia coli O157:H7 str. LSU-61] Length = 359 Score = 92.7 bits (229), Expect = 8e-17, Method: Composition-based stats. Identities = 58/366 (15%), Positives = 131/366 (35%), Gaps = 26/366 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD--------ISIMKFKSYTLQTE 231 YA+S +I+ D+ IL+ G H+K K+ F S L+ Sbjct: 181 DLSLESYIYARSATIEDDKT-WILH-GVNHKKWLNGKETLETLDNLAWQSAFTSMDLEEL 238 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S +T ++ + + +L + YR ++L Q + + L+++ Sbjct: 239 SMPGNTFSVRQLNHYIHYL--------QETGQPSSEYRLALWEKLGQPILTLAMILLAVP 290 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-----FLFCI 346 + R + + + + + + +++ P+ L F+ Sbjct: 291 F--TFSAPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPIAFVLVA 348 Query: 347 SSIFLL 352 S+ Sbjct: 349 LSLVYW 354 >gi|330874293|gb|EGH08442.1| hypothetical protein Pgy4_05807 [Pseudomonas syringae pv. glycinea str. race 4] Length = 213 Score = 92.7 bits (229), Expect = 9e-17, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 75/206 (36%), Gaps = 11/206 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLV--SSSTESLNILLKISGYLIP 58 M + YI + + + L I+ + + I+ + S T +L L P Sbjct: 1 MVKLDRYIGKSVLLAILAVLGIILGLV---SLFAFIDEMGDISDTYTLADALSYVMLTAP 57 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + P + L ++ ++EL I+ G S ++ V+ +LL + + Sbjct: 58 RRVYDTLPMAALIGCLIGLGTLASSSELTIMRAAGVSIGRIVWAVMKPMLLLMVAGVLVG 117 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF---I 175 + P + + + AQ + L+ R ++ +I I+ PN + G+ Sbjct: 118 EYVAPYAENQAQAARSLAQGSGDAQSARHGLWHRQGEE-FIHINTVQPNGLMLGVTRYRF 176 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAI 201 D R T +A+ + D + Sbjct: 177 DDQRHMLTSS--FAKEANFKTDYWEL 200 >gi|237752929|ref|ZP_04583409.1| conserved hypothetical protein [Helicobacter winghamensis ATCC BAA-430] gi|229375196|gb|EEO25287.1| conserved hypothetical protein [Helicobacter winghamensis ATCC BAA-430] Length = 344 Score = 92.7 bits (229), Expect = 9e-17, Method: Composition-based stats. Identities = 45/227 (19%), Positives = 102/227 (44%), Gaps = 8/227 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + ++ + + F L + FIA V+ ++ + S LL + Y +PT+L Sbjct: 2 RIKNFLFQSFAQVFFPIFLVLFFIASVVIFIRIAGVTFVVKISFLELLTLYFYTLPTMLF 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 V P F + L+ ++ + EL ++ G + ++K +A+L S+ LF+ I+ Sbjct: 62 FVIPLSFFVACVLGLSRLSFDYELPVLFALGMNPKKIVKIFFPIALLASVSLFVLSLILT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +Q + + ++ + L+ F + + + + K N+T + I ++ + Sbjct: 122 PLSDIAYRQFLEERKSSIDVN-LQAGEFGQKLGEWLVYVQK-GKNSTYENIVLLSLQAKG 179 Query: 183 THK--IYYAQSGSIDLDRQAI--ILNDGEVHRKSPISKDISIMKFKS 225 + K + +A+ +I + L+DG+++RK +S + + F Sbjct: 180 SQKDGLVFAKQANIGNVDGVMEAHLSDGKIYRK--VSDGVERISFDE 224 >gi|218701754|ref|YP_002409383.1| hypothetical protein ECIAI39_3474 [Escherichia coli IAI39] gi|227887686|ref|ZP_04005491.1| inner membrane protein [Escherichia coli 83972] gi|301019929|ref|ZP_07184064.1| conserved hypothetical protein [Escherichia coli MS 196-1] gi|218371740|emb|CAR19591.1| conserved hypothetical protein; putative membrane protein [Escherichia coli IAI39] gi|227835082|gb|EEJ45548.1| inner membrane protein [Escherichia coli 83972] gi|299882027|gb|EFI90238.1| conserved hypothetical protein [Escherichia coli MS 196-1] gi|307555074|gb|ADN47849.1| putative permease [Escherichia coli ABU 83972] Length = 359 Score = 92.7 bits (229), Expect = 9e-17, Method: Composition-based stats. Identities = 58/366 (15%), Positives = 131/366 (35%), Gaps = 26/366 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK--------FKSYTLQTE 231 +A+S SI+ D+ IL+ G H+K K+ F S L+ Sbjct: 181 DLSLESYIFARSASIEDDKT-WILH-GVNHKKWLNGKETLETSDNLAWQSAFTSMDLEEL 238 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S +T ++ + + +L + YR ++L Q + + L+++ Sbjct: 239 SMPGNTFSVRQLNHYIHYL--------QETGQPSSEYRLALWEKLGQPILTLAMILLAVP 290 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-----FLFCI 346 + R + + + + + + +++ P+ L F+ Sbjct: 291 F--TFSAPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVA 348 Query: 347 SSIFLL 352 S+ Sbjct: 349 LSLVYW 354 >gi|320451334|ref|YP_004203430.1| hypothetical protein TSC_c22790 [Thermus scotoductus SA-01] gi|320151503|gb|ADW22881.1| hypothetical membrane spanning protein [Thermus scotoductus SA-01] Length = 336 Score = 92.3 bits (228), Expect = 9e-17, Method: Composition-based stats. Identities = 70/366 (19%), Positives = 124/366 (33%), Gaps = 44/366 (12%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 Y+L+ + +L+ L V + + ++ S + + K+ Y +P L + Sbjct: 2 LGRYVLKEVLVPYLVGVLLFVALLTFDLLSSLSGVLLSRGAGVEAIAKLILYRLPWTLSL 61 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P L + R +EL G L+KP+ LA+L+S F ++ + P Sbjct: 62 ALPLGLVFAILVGLARLIRQSELKAAYAAGVPPWALLKPLALLALLVSFFNLVNLAELRP 121 Query: 124 KCRSTIKQLSAKAQL--ALTFSYLEENLFFRLDDDLYIKISKYNPN---NTLQGIFIVDS 178 K Q A+ L + L+ +Y + P N L GI +VD Sbjct: 122 KALEAYDQHLARLLYGEGGLSGVLRKQLYAAEGLGVY-YAEEVRPEVGQNRLYGIRVVDE 180 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN--SS 236 R +IY Q G D + F+ Y L+ + Sbjct: 181 R----GRIYSGQEGVWDKEGW----------------------HFRGYVLEGGKPKPFAG 214 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSE------FHKRLTQWLFPVIFGLISI 290 T+ + L + +P + EL E + E ++RL L + + Sbjct: 215 TLPFPTQFRPKESLGSRDPYDSTTLRELWERSQVEPSARFALYRRLADALGGF---FLGL 271 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 VAA R+ + L + V W S + + + NP + L F ++ Sbjct: 272 VAAALGLSFREAAWAFLSIVLLIFGYYVLWTLSAQLARYDVNP-LLAFLPNAFFAALGLY 330 Query: 351 LLMIKK 356 L + Sbjct: 331 LTWRLR 336 >gi|307566072|ref|ZP_07628530.1| conserved hypothetical protein [Prevotella amnii CRIS 21A-A] gi|307345260|gb|EFN90639.1| conserved hypothetical protein [Prevotella amnii CRIS 21A-A] Length = 427 Score = 92.3 bits (228), Expect = 9e-17, Method: Composition-based stats. Identities = 48/355 (13%), Positives = 119/355 (33%), Gaps = 6/355 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 + + YI++ ++L + L I+ I+ V + ++ + I+ IP Sbjct: 67 IGRLDWYIIKKFIGTYLFAILLIISISIVFDFNENLSKFTQYHAPWRAIIFDYYANFIPY 126 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + G S L++P + I++S F + Sbjct: 127 YSNLFSPLFVFIAVIFFTSKLASNSEIIAMLAAGVSFKRLMRPYMISCIVISALTFYLNS 186 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDS 178 + P + I+Q + EN+ ++ + I ++ + G + Sbjct: 187 FVIPHG-TVIRQNFESLYRNNKKNTSAENVQLKVAKNTVAYIQYFDDHYKRGYGFSLAKF 245 Query: 179 RDTQTHKIYYAQS---GSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + + A ++ + +++ ++ + + + I+ K L E + Sbjct: 246 ENKKLVSHMTAMEIQYDTVADTKYHWKVSNYKIRQLKGLKEHITTGDEKDTILLMEPTDL 305 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + LLN + + Y EFHKR+ I +I + + + Sbjct: 306 VYSKGQQETFTSPELLNYISKQNSRGLSNVVQYEVEFHKRIAMSFSAFILTIIGLSLSAR 365 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 + + + + K P + F+F + F Sbjct: 366 KRKGGMGLYLGIGLGLSFSYILLQTVSATFAIKANTPPILAAWIPNFIFVFIAYF 420 >gi|197287278|ref|YP_002153150.1| permease [Proteus mirabilis HI4320] gi|227357022|ref|ZP_03841393.1| inner membrane protein [Proteus mirabilis ATCC 29906] gi|194684765|emb|CAR46795.1| putative permease [Proteus mirabilis HI4320] gi|227162825|gb|EEI47785.1| inner membrane protein [Proteus mirabilis ATCC 29906] Length = 359 Score = 92.3 bits (228), Expect = 9e-17, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 138/356 (38%), Gaps = 24/356 (6%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI R I +S LM+ +V ++ +I+ + ++ V + + I + Sbjct: 3 GVLDKYIGRTILQSILMTLFLLVSLSGIIKFVDQLRKVGQGDFTTLDAGIYAVLNILKDV 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ +EL+++ +G +R+ + V+ AI L + + Sbjct: 63 QIFFPMAALLGALLGLGALATRSELVVMQASGFTRLQIAGSVMKTAIPLVLLTVLIGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SRD 180 P+ + A+ + + ++ + D + +I I++ N +QGI + + + Sbjct: 123 APQGEQYARNYRAEKIMGNSLVSTNRGMWAK-DGNQFIYINRIKSQNEMQGITLYNFDNN 181 Query: 181 TQTHKIYYAQSGSIDLDRQAIILN-----DGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + + YA S + D D++ +L D +K K +S+ + + Sbjct: 182 RKLETVRYASSATYDPDKKVWLLKQVEQSDLTSPQKITGKKQVSL----EWQTRLTPEKL 237 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 S + L + ++S L + Y F K++ + + L+++ Sbjct: 238 SVVALDPDALSISGLY-QYVKYLKQSGQESANYELNFWKKIFAPISVAVMMLMALSFIFG 296 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGF-SYIIHKIEQNPYYIPILYLFLFCISSIF 350 + + + L + G+ +GF YI++++ + Y ++++ Sbjct: 297 P--------LRTVPMGLRVVTGIAFGFLFYIVNEVSGRLSLV---YGIPAVVAALV 341 >gi|213962435|ref|ZP_03390697.1| permease YjgP/YjgQ family protein [Capnocytophaga sputigena Capno] gi|213954761|gb|EEB66081.1| permease YjgP/YjgQ family protein [Capnocytophaga sputigena Capno] Length = 358 Score = 92.3 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 47/363 (12%), Positives = 128/363 (35%), Gaps = 9/363 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL+ +F + + + I ++ + ++++ + +N +L I Sbjct: 1 MKILDWYILKRYLLTFFIMIVLFIPIGIIVDLSEKVDKMIERKAPMNEILWYYLSFIVYF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + + + NTE++ I ++G S + ++P + A ++S+ +F Sbjct: 61 ANILFPILLFLSIIWFTSKLANNTEIIAIQSSGVSYMRFLRPYIVGASIISVIVFFMGMF 120 Query: 121 IEPKCRSTIKQLSAK-AQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDS 178 I P + K + + S +L+ + D+ Y+ +S +N + Sbjct: 121 IVPAASTVYNDFWNKYIRSSKVESV--SDLYNQFSDNDYLYVSSFNYQEQKGYNFSVEHF 178 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + A++ + L + + + + + + Sbjct: 179 DGIKMKEKINAETIQWIDSTKTYRLTNYSKRKIGEGDDILVKRDQLDTIFNFKPDDLMPM 238 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 A ++NL L L Y ++R I LI + ++ Sbjct: 239 EYTAENKNLFELNKFIEREKMKGSPNLNMYLLVKYRRWGAISTAFILTLIGVAV---SSV 295 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--FCISSIFLLMIKK 356 ++ + + + + F + + + P++ + L ++ +L+++K Sbjct: 296 KKRGGMGINLMVGVVVGFSFVFFDRVFGTLAQTSGGLSPLMAVVLPNLIFLTLAILLLRK 355 Query: 357 KYT 359 + Sbjct: 356 VRS 358 >gi|117619151|ref|YP_858152.1| putative permease [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117560558|gb|ABK37506.1| putative permease [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 356 Score = 92.3 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 60/358 (16%), Positives = 135/358 (37%), Gaps = 9/358 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI R I S L+ L +V +A +I+ ++++ V + L +P Sbjct: 3 GILDRYIGRVIFMSVLLCELTLVGLAALIKYVEQLKSVGEGNYDMLSALYYVLLSMPKEA 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L + ++EL+++ G S+I+++ L AI L I + + + Sbjct: 63 VLFFPLAALLGGLIGLGQLATSSELVVMQAAGRSKISIVMAALKTAIPLMILVGLMGEYV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-DSRD 180 P + + A A + ++ R ++ ++ I+ + L GI + + + Sbjct: 123 APIAKRMADDIKAGALSEGRLTVSAYGVWARDGNN-FVNINGVRNDGALTGITLYRFTPE 181 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK-SYTLQTESANSSTIV 239 + I AQ G ++ +L +V R + +S + + ++ + + Sbjct: 182 RKLIDILQAQEG--VFEQHHWLLKQVQVTRFDDPRQIMSETQPQMEWSSELTPKQLGVVS 239 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADKRA 297 + + ++ LL+ + + Y+ E ++L L V L++ + R+ Sbjct: 240 IDPENLPVAGLLD-YIGYLDANKQDAGRYKLEMWRKLLSPLSVVAMILLASSFIFGPLRS 298 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + + I ++ F I P I LF S ++L K Sbjct: 299 VSMGARMLMGIMTGFAVYVSDRV-FGPISLVYAVPPILAAIAPSLLFGGISFYILSRK 355 >gi|207108562|ref|ZP_03242724.1| hypothetical protein HpylH_03299 [Helicobacter pylori HPKX_438_CA4C1] Length = 206 Score = 92.3 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 37/199 (18%), Positives = 77/199 (38%), Gaps = 4/199 (2%) Query: 44 ESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPV 103 S L+++ Y +P + + P F L+ ++ + ELL+ + G S + K Sbjct: 4 VSFLDLVQLFLYSLPGTIFFILPITFFAACALGLSRLSYDHELLVFFSLGVSPKKMTKAF 63 Query: 104 LFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISK 163 + L++L+S L + I+ P +S + + + F + D + + K Sbjct: 64 VPLSLLVSAILLVFSLILIPTSKSAYYGFLRQ-KKDKIDINIRAGEFGQKLGDWLVYVDK 122 Query: 164 YNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKF 223 NN+ + + ++ AQ G+I+ LN + H + + F Sbjct: 123 -AENNSYDNLVLFSNKSLSQESFILAQKGNINNQNGVFELNLYKGHAYFTQGDKMRKVDF 181 Query: 224 KSYTL--QTESANSSTIVL 240 + L + +S NS+ Sbjct: 182 EELHLRNKLKSFNSNDAAY 200 >gi|260857119|ref|YP_003231010.1| putative inner membrane protein [Escherichia coli O26:H11 str. 11368] gi|257755768|dbj|BAI27270.1| predicted inner membrane protein [Escherichia coli O26:H11 str. 11368] Length = 359 Score = 92.3 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 58/366 (15%), Positives = 130/366 (35%), Gaps = 26/366 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + VL IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVVLVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD--------ISIMKFKSYTLQTE 231 YA+S +I D+ +L+ G H+K K+ F S L+ Sbjct: 181 DLSLESYIYARSATIKDDKT-WVLH-GVNHKKWLNGKETLETLDNLAWQSAFTSMNLEEL 238 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S +T ++ + + +L + YR ++L Q + + L+++ Sbjct: 239 SMPGNTFSVRQLNHYIHYL--------QETGQPSSEYRLALWEKLGQPILTLAMILLAVP 290 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-----FLFCI 346 R + + + + + + +++ P+ L F+ Sbjct: 291 FTFTAP--RSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVA 348 Query: 347 SSIFLL 352 S+ Sbjct: 349 LSLVYW 354 >gi|256823037|ref|YP_003147000.1| permease YjgP/YjgQ family protein [Kangiella koreensis DSM 16069] gi|256796576|gb|ACV27232.1| permease YjgP/YjgQ family protein [Kangiella koreensis DSM 16069] Length = 354 Score = 92.3 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 49/362 (13%), Positives = 121/362 (33%), Gaps = 13/362 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI + I + +M+ + I + ++ + L S L P Sbjct: 1 MNILRFYIGKTILATSVMTLFTLAIIRVLFSLIDESGDFGKGSYQFVDGLAYSLLLSPQY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + L + ++EL ++ G + + ++ L ++L F Sbjct: 61 IYEFFPMAILIGSIAGLGLLASHSELTVMRAAGKTTMQIVGSALSYGLILIAFAIFLGEY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SR 179 + PK + + +A L E+ ++ + + + I + ++ + G+ I Sbjct: 121 VAPKTTRMAEDIRNRAILGEQLLKAEQGVWVKDGSKM-VHIDEMLGSDRMDGVSIYQFDS 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK--SYTLQTESANSST 237 + I +A S I L +G ++ I+ +F + + N S Sbjct: 180 QQKLESIIHAPSALISEG--VWRLQNG--YQSYLTDTGINRERFDAMEWRTNIQMDNLSV 235 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADK 295 + ++ L ++Y F +++ Q L I +++ V Sbjct: 236 LSDDPETLDIMSLYR-YREYLANNGLDTQSYDLAFWRKIIQPLSTAIMIVLAASFVFGPM 294 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 R++ + + + ++ F V + + P + + + + L+ K Sbjct: 295 RSVSMGARVLVGVLTGMAYFFAVR--TFGPVSLVFGMPAFFGAILPPAIFAAGAWYLLRK 352 Query: 356 KK 357 Sbjct: 353 AG 354 >gi|329956780|ref|ZP_08297349.1| permease, YjgP/YjgQ family [Bacteroides clarus YIT 12056] gi|328523819|gb|EGF50906.1| permease, YjgP/YjgQ family [Bacteroides clarus YIT 12056] Length = 605 Score = 92.3 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 75/181 (41%), Gaps = 5/181 (2%) Query: 29 VIQIL-QRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELL 87 ++Q L + ++ + +N+L + Y T++P P + + ELL Sbjct: 1 MMQFLWKYVDEMVGKGLEMNVLAQFFFYSALTLVPASLPLAILLAALITFGNFGERFELL 60 Query: 88 IIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEE 147 + G S + +++P++ ++ F +N+I PK ++ + L + + E Sbjct: 61 AMKAAGISLLKIMRPLIIFISIICCVSFYFQNVIGPKAQTKLWTLLISMKQKSPEVDIPE 120 Query: 148 NLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSRDT-QTHKIYYAQSGSID--LDRQAIIL 203 +F+ D + + N L + I + + +I + SG ++ D+Q + L Sbjct: 121 GVFYDEIDGYNLYVKHKNRKTGMLYDVLIYNFEKGFENAQIIKSDSGRLEMTADKQHLYL 180 Query: 204 N 204 + Sbjct: 181 H 181 >gi|167561902|ref|ZP_02354818.1| hypothetical protein BoklE_05005 [Burkholderia oklahomensis EO147] gi|167569154|ref|ZP_02362028.1| hypothetical protein BoklC_04865 [Burkholderia oklahomensis C6786] Length = 382 Score = 92.3 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 52/380 (13%), Positives = 125/380 (32%), Gaps = 27/380 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRVYEKYFARQIYVTFVFVLFAFSGLFFFFDLIGELNSVGHGNYKFGYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + V M N+E I +G + ++ +L + + + I ++ Sbjct: 61 FYEIIPVAALISSIYVFAQMAANSEFTIFRVSGLATNQALRSLLKIGVPIVIATYLIGEF 120 Query: 121 IEPKC-----RSTIKQLSAKAQLALTFSYLEENLFFRLDDD----LYIKISKYNPNNTLQ 171 I P R ++ L + ++ D+ ++ + + +P++T+ Sbjct: 121 IGPYSDQLSERVRLEALGSSVSTNFASGVWVKDTLTARDNGEPVTRFVNVGQLSPDSTIS 180 Query: 172 GIFIVD-SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-------------D 217 + I + + A+ G +L D + + +S Sbjct: 181 DVRIYEFDSKFNLQNVRIAKRGRYQP-PGHWLLTDVTDTQLTNVSGAGGQPADALNPVYR 239 Query: 218 ISIMKFKSYTLQTE-SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRL 276 + Y+L+++ + +++L + ++ F L + + + Y ++L Sbjct: 240 ARQVTLPQYSLRSDLTPQILSVLLVSPERMSLFNLFRYIQHLKENQQDTQRYDIALWRKL 299 Query: 277 TQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 + ++S+ A I L +SF +F I + N + Sbjct: 300 LYPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLFNTLFSHIGTL--NTWPA 357 Query: 337 PILYLFLFCISSIFLLMIKK 356 P+ CI L K Sbjct: 358 PLTAALPGCIYLALGLFALK 377 >gi|323966510|gb|EGB61943.1| permease YjgP/YjgQ family protein [Escherichia coli M863] gi|327251763|gb|EGE63449.1| hypothetical protein ECSTEC7V_3615 [Escherichia coli STEC_7v] Length = 359 Score = 92.3 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 58/366 (15%), Positives = 131/366 (35%), Gaps = 26/366 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGTIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK--------FKSYTLQTE 231 YA+S +I+ D+ IL+ G H+K K+ F S L+ Sbjct: 181 DLSLESYIYARSATIEDDKT-WILH-GVNHKKWLNGKETLETSDNLAWQSAFTSMNLEEL 238 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S +T ++ + + +L + YR ++L Q + + L+++ Sbjct: 239 SMPGNTFSVRQLNHYIHYL--------QETGQPSSEYRFALWEKLGQPILTLAMILLAVP 290 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-----FLFCI 346 + R + + + + + + +++ P+ L F+ Sbjct: 291 F--TFSAPRSPGMGSRLAVGVIVGLLTWSSYQIMVNLGLLFALSAPVTALGLPIAFMLVA 348 Query: 347 SSIFLL 352 S+ Sbjct: 349 LSLVYW 354 >gi|323978946|gb|EGB74026.1| permease YjgP/YjgQ family protein [Escherichia coli TW10509] Length = 359 Score = 92.3 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 58/366 (15%), Positives = 131/366 (35%), Gaps = 26/366 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK--------FKSYTLQTE 231 YA+S +I+ D+ IL+ G H+K K+ F S L+ Sbjct: 181 DLSLESYIYARSATIEDDKT-WILH-GVNHKKWLNGKETLETSDNLAWQSAFTSMNLEEL 238 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S +T ++ + + +L + YR ++L Q + + L+++ Sbjct: 239 SMPGNTFSVRQLNHYIHYL--------QETGQPSSEYRLALWEKLGQPILTLAMILLAVP 290 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-----FLFCI 346 + R + + + + + + +++ P+ L F+ Sbjct: 291 F--TFSAPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPIAFMLVA 348 Query: 347 SSIFLL 352 S+ Sbjct: 349 LSLVYW 354 >gi|189461313|ref|ZP_03010098.1| hypothetical protein BACCOP_01963 [Bacteroides coprocola DSM 17136] gi|189431842|gb|EDV00827.1| hypothetical protein BACCOP_01963 [Bacteroides coprocola DSM 17136] Length = 378 Score = 92.3 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 122/357 (34%), Gaps = 14/357 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 +K + YI+ ++ + I+ IA V + + I+ ++ L I+ IP Sbjct: 20 LKRLDRYIIVKFLGTYFFAIALIISIAVVFDVNENIDHFINNKAPLKAIVFDYYLNFIPY 79 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + +TG S L+ P + A ++S F+ Sbjct: 80 YTNLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRLMVPYMISAGIISAVTFVLGT 139 Query: 120 IIEPKC---RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + P R ++ K + A ++ +D + + +Y+ + F + Sbjct: 140 EVIPTGSVTRLKFEERYKKKKSADYARNIQ----LEVDSGVVAYMERYDAYSKSGYHFSL 195 Query: 177 DS-RDTQTHKIYYAQSGSIDLDR-QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 D D + A+ + D I+ D + + + I+ ++ E + Sbjct: 196 DKFEDHKLVSHLTARRATYDTTMYHRWIIRDYMIREMRGMREYITRGDRLDSIIKMEPQD 255 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + L ++ + E+H+R+ I I + Sbjct: 256 FLITRGQQETMTSPQLKEYISKQKQRGFANIKEFEVEYHRRIAMSFAAFILTSIGLSL-- 313 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + + + + + F I N +P + +++ I +F+ Sbjct: 314 --SSRKVKGGMGLHLGIGLGLSFSYILFQTISSTFAINGNMMPAIAVWIPNILYLFI 368 >gi|261819787|ref|YP_003257893.1| permease YjgP/YjgQ family protein [Pectobacterium wasabiae WPP163] gi|261603800|gb|ACX86286.1| permease YjgP/YjgQ family protein [Pectobacterium wasabiae WPP163] Length = 358 Score = 92.3 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 49/354 (13%), Positives = 123/354 (34%), Gaps = 11/354 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI + I + + + +V ++ +I+ + ++ V S + +P + Sbjct: 3 GVLDRYIGKTIFTTIITTLFMLVSLSGIIKFVDQLRKVGQGEYSALGAGLYTLLSVPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + L + +EL+++ +G +R+ + V+ AI L + + Sbjct: 63 ETFFPMAALLGALLGLGQLATRSELVVMQASGFTRLQIATAVMKTAIPLVLLTMAIGEWV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI-VDSRD 180 P+ + ++ + + L+ + +D +I I + + L G+ I Sbjct: 123 SPQGEQMARNYRSQMISGGSMISTQGGLWAKDGND-FIYIERIVGDKELSGVNIYHFDEQ 181 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-DISIMKFKSYTLQTESANSSTIV 239 + + YA S D DR L+ + S + S + + Sbjct: 182 NKLLSVRYAASAEFDKDRNVWNLSQVDESDLSDGKQIGGSQTLSGEWKTNLTPDKLGVVA 241 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L+ N ++ L + + Y+ ++ + + L+++ + Sbjct: 242 LEPNALSIRGL-HDYAKYLKQSGQESGRYQLNMWSKIFAPVSVAVMMLMAVSFIFGP--L 298 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 R I I +S F F Y++++I + + + L + + + Sbjct: 299 RSVSAGSRIVIGISFGF-----FFYLLNEIFRPLSLVYGIPPILGAVLPSSVFL 347 >gi|218132104|ref|ZP_03460908.1| hypothetical protein BACEGG_03732 [Bacteroides eggerthii DSM 20697] gi|217985754|gb|EEC52095.1| hypothetical protein BACEGG_03732 [Bacteroides eggerthii DSM 20697] Length = 605 Score = 92.3 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 76/181 (41%), Gaps = 5/181 (2%) Query: 29 VIQIL-QRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELL 87 ++Q L + ++ + +N+L + Y T++P P + + ELL Sbjct: 1 MMQFLWKYVDEMVGKGLEMNVLAQFFFYSALTLVPASLPLAILLAALITFGNFGERFELL 60 Query: 88 IIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEE 147 + G S + +++P++F L+ F +N+I PK ++ + L + + E Sbjct: 61 AMKAAGISLLKIMRPLIFFISLICCVSFYFQNVIGPKAQTKLWTLLVSMKQKSPEVDIPE 120 Query: 148 NLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSRDT-QTHKIYYAQSGSID--LDRQAIIL 203 +F+ D + + N L + I + + +I + SG ++ D+Q + L Sbjct: 121 GVFYDEIDGYNLYVKHKNRETGMLYDVLIYNFEKGFENAQIIKSDSGRLEMTADKQHLYL 180 Query: 204 N 204 + Sbjct: 181 H 181 >gi|118602882|ref|YP_904097.1| permease YjgP/YjgQ family protein [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567821|gb|ABL02626.1| permease YjgP/YjgQ family protein [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 360 Score = 92.3 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 53/365 (14%), Positives = 118/365 (32%), Gaps = 19/365 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI++ + L + I L+ + + + ++ + K IP V Sbjct: 1 MKILDRYIVKTMAFYTSAVMLVWLGIYAFFNFLEEVTFIGQANYTVFEVTKYVISDIPAV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + + + L + ++L++I + G S + + V+ A++ + + Sbjct: 61 VYSYSSVIILLGSLLALGHLASTSQLVVIRSAGVSIMQISNIVVRAALMFIAIVIFIGEL 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + L AKA ++ + + + L+I + K + Q + ++ R Sbjct: 121 VTPITIEYAESLRAKALGENITFKNQQGFWLKDSE-LFIHVKKNFDGKSFQDVTLIKLRA 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK--DISIMKFKSYTLQTESANS--S 236 T S S + + L+ ++ S F+ Y++Q Sbjct: 180 PDTLDSIV-HSDSAISNGDNLELSQSIHYQFGKDGNLTTFSENNFEKYSVQVSFNKKLIE 238 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAAD 294 + + + L + + E +KRL + + + L S V Sbjct: 239 NLKKDPRELSTWHLYQQ-IRFLTINHLAADIFEVEIYKRLMKPITLIAMILFSMLFVFGS 297 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R + + +SL G + Y S LLM+ Sbjct: 298 LRDASLGKNIFLGLMMSLFFELASRIGGVLSLR----------FDYNHFLSASIPTLLML 347 Query: 355 KKKYT 359 + Sbjct: 348 VFVWA 352 >gi|222034702|emb|CAP77444.1| hypothetical protein LF82_487 [Escherichia coli LF82] gi|312947540|gb|ADR28367.1| hypothetical protein NRG857_14785 [Escherichia coli O83:H1 str. NRG 857C] Length = 359 Score = 92.3 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 57/366 (15%), Positives = 131/366 (35%), Gaps = 26/366 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD--------ISIMKFKSYTLQTE 231 YA+S +I+ D+ +L+ G H+K K+ F S L+ Sbjct: 181 DLSLESYIYARSATIEDDKT-WVLH-GVNHKKWLNGKETLETLDNLAWQSAFTSMNLEEL 238 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S +T ++ + + +L + YR ++L Q + + L+++ Sbjct: 239 SMPGNTFSVRQLNHYIHYL--------QETGQPSSEYRLALWEKLGQPILTLAMILLAVP 290 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-----FLFCI 346 + R + + + + + + +++ P+ L F+ Sbjct: 291 F--TFSAPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPIAFVLVA 348 Query: 347 SSIFLL 352 S+ Sbjct: 349 LSLVYW 354 >gi|242279363|ref|YP_002991492.1| permease YjgP/YjgQ family protein [Desulfovibrio salexigens DSM 2638] gi|242122257|gb|ACS79953.1| permease YjgP/YjgQ family protein [Desulfovibrio salexigens DSM 2638] Length = 376 Score = 92.3 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 44/360 (12%), Positives = 115/360 (31%), Gaps = 13/360 (3%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 Y+L+ + I + + R++ + + +LK +P + Sbjct: 10 LASYVLKQNIFLMCVCLGVGTGIYLLSDLFDRLDDFIEAGLGMGTILKYFLVKMPLIFSQ 69 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 + P F + L M R+ ELL + G S I ++ + A++ S + +I Sbjct: 70 ILPAVFLISMIVQLCVMARSKELLALRTGGLSLIWFLRFFVIYAVIWSFGQLLFSQVIGV 129 Query: 124 KC-RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVD--SR 179 + + + ++ + +N++ + + ++ + P N + I + + Sbjct: 130 YGEQEAYRIWKEDVRKSMLDKRVLKNIWLK-EGRFVVEAKEVMPFGNRAKDITVYEFAEG 188 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + ++ ++S + + L + + + L Sbjct: 189 NGGIKRVITSESAEV-SSKYGWKLENAVELSPDKFASQKHPIFTMPIKLNLNVFKVVDPD 247 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + L L + ++ + +H ++W + F L+++ + Sbjct: 248 IDPAQLPLWQL-DQVIEQLKLSGSSVDRLITAWH---SKWAY--AFSLLTMALVSLALVT 301 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYT 359 I + L+I F + F PI+ +L I L + + + Sbjct: 302 ITENIYLNIGLGLAIIFTYYALFMVGAS-AGDTGALPPIVAAWLGNILVSSLALGRIAWV 360 >gi|192358887|ref|YP_001981939.1| putative permease, YjgP/YjgQ family [Cellvibrio japonicus Ueda107] gi|190685052|gb|ACE82730.1| putative permease, YjgP/YjgQ family [Cellvibrio japonicus Ueda107] Length = 352 Score = 91.9 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 47/358 (13%), Positives = 119/358 (33%), Gaps = 8/358 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ YI R + + ++ L + + ++ + ++ + S + +S +P Sbjct: 1 MRKITGYISRTVFSAIALTLLVFISLDFIFSFIDQLGKIRGGYTSREAFIYMS-LTVPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P+ + + L + ++EL +I G S + L A + + I Sbjct: 60 LYELIPYSCLIGSLVGLGLLANSSELTVIRAAGVSVKRIAWMALRPAFVFIVAAVILGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + N++ R + + Y+ + P+ + G+ + Sbjct: 120 VAPYTEQMADNRRLLVRDNWVRT--TTNMWNR-EGNEYMHVQAVLPSGVIYGLTRYQFDE 176 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + +I + D V R ++ + + + + +V+ Sbjct: 177 QRRLVAASYTKQAIYQEEGYWQEEDVAVTRIGEQGVSNDLLPSRRWETPLKPNLLNILVM 236 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADKRAL 298 D ++S L N N + Y F ++ Q L + LI+ + R++ Sbjct: 237 DPEDMSISNL-NYYSNYLKEQNLRPGNYALAFWQKTLQPLATMSLVLIAISFIFGPLRSV 295 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 ++ I + P + ++ + + + +FLL + Sbjct: 296 TMGQRIFTGIVFGVGFQLLQKLMGP-ASMVFGFAPVFAVLIPIVICILVGVFLLSRAR 352 >gi|293416424|ref|ZP_06659063.1| hypothetical protein ECDG_03180 [Escherichia coli B185] gi|291431780|gb|EFF04763.1| hypothetical protein ECDG_03180 [Escherichia coli B185] Length = 359 Score = 91.9 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 57/366 (15%), Positives = 128/366 (34%), Gaps = 26/366 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQAMQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRK--------SPISKDISIMKFKSYTLQTE 231 YA+S +I D + IL+ G H+K F S L+ Sbjct: 181 DLSLESYIYARSATI-KDDKMWILH-GVNHKKWLNGKETLDTSDNLAWQSAFTSMDLEEL 238 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S +T ++ + + +L + YR ++L Q + + L+++ Sbjct: 239 SMPGNTFSVRQLNHYIHYL--------QETGQPSSEYRLALWEKLGQPILTLAMILLAVP 290 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-----FLFCI 346 + R + + + + + + +++ P+ L F+ Sbjct: 291 F--TFSAPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPIAFVLVA 348 Query: 347 SSIFLL 352 S+ Sbjct: 349 LSLVYW 354 >gi|284037837|ref|YP_003387767.1| permease YjgP/YjgQ family protein [Spirosoma linguale DSM 74] gi|283817130|gb|ADB38968.1| permease YjgP/YjgQ family protein [Spirosoma linguale DSM 74] Length = 358 Score = 91.9 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 57/346 (16%), Positives = 131/346 (37%), Gaps = 9/346 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLV-SSSTESLNILLKISGYLIPT 59 MK + YIL+ ++++ + IV + +I ++++ + IL IP Sbjct: 1 MKLLDAYILKRFLQTYIFVVMVIVLVVVMIDYTEKVDNFHKTHAPGNEILFNYYLNFIPY 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++P + T + + + TE++ I ++G S + L+ P + A +L++ + N Sbjct: 61 WANYISPLMVFIATVFLTSRLAARTEIIAILSSGVSFVRLLLPYVLGATVLAVATYFMVN 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDS 178 + PK T K N+ ++ + Y + YN +NT + Sbjct: 121 YVIPKANKTRIAFEIKYINDAYNFSGR-NVHLKIAPNTYAYLESYNNQSNTGYKFTMERV 179 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 Q + A D ++ + D ++ + + ++ TL + + S+ Sbjct: 180 EGNQLKQKLSADHIEWDAKKKKWTVFDYKIRTINGPQETLTPGAKIDTTLNLKPDDFSSD 239 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 L + + + +ETY E + R T+ +I +I ++ Sbjct: 240 FNLYETLTRPELNDHIELLQSRGADGVETYLLEKYSRDTRPFAIIILTVIGVI-----MS 294 Query: 299 VRQRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLFL 343 R+ ++ ++L + F + I ++ PI+ ++L Sbjct: 295 ARKSRRGVGWQVALGFFLAFTYLLFFMLAKGIAESGNLNPIVAVWL 340 >gi|78486087|ref|YP_392012.1| permease YjgP/YjgQ [Thiomicrospira crunogena XCL-2] gi|78364373|gb|ABB42338.1| YjgP/YjgQ family protein [Thiomicrospira crunogena XCL-2] Length = 370 Score = 91.9 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 67/374 (17%), Positives = 133/374 (35%), Gaps = 22/374 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E Y+ R + L+ + ++ I + + +I VS ++ + +P Sbjct: 2 MNLIERYLGRVLVSHTLLVLMVLLIILGFSEFMIQIGKVSDD-YTVAKGAMYTVLKLPVY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + T L S+ + EL I+ TG S + V+ A +L + + Sbjct: 61 GYEIFPVALLIGTLIGLGSLANHAELTILRVTGWSIRRIFFAVMKSAFILWVCAAVIGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P S K++ +A ++ F+ D + YI + + + + I D Sbjct: 121 VAPASESYAKKMRGEALHKNFSIGSTDD-FWMRDGERYIHVGRVISDTQFYDVTIYSLED 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVH--------RKSPISKDISIMKFKSY------ 226 Q + +A + +L SP K ++FK Y Sbjct: 180 GQLSEQVHANTARYSEKEGQWVLYSLNRKVLDWQKMPALSPDRKTWKKLQFKQYDEVEGA 239 Query: 227 -TLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIF 285 L T+ ++ ++ L + + E Y+ F ++L VI Sbjct: 240 VDLPVSPTLLQTLHVETRYMGITDLFS-YISFLEENGLDAEAYKLAFWRKLAMPF--VIL 296 Query: 286 GLISIVAADKRALVRQRKKIHPIFIS--LSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 G+I++V RQ IF+ + +SF + + + Q P + + Sbjct: 297 GMIALVFPLIFGSQRQVSIGQRIFVGIMIGMSFHLLNQIFGNLSVVYQLPAIMGAFLPSI 356 Query: 344 FCISSIFLLMIKKK 357 +S+ FLLM + + Sbjct: 357 VLMSAAFLLMRRLR 370 >gi|325971216|ref|YP_004247407.1| permease YjgP/YjgQ family protein [Spirochaeta sp. Buddy] gi|324026454|gb|ADY13213.1| permease YjgP/YjgQ family protein [Spirochaeta sp. Buddy] Length = 420 Score = 91.9 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 79/193 (40%), Gaps = 2/193 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 +I R SFL++ F FI ++ QIL + +L++ IP L Sbjct: 8 SLVYRHIGREYLLSFLVAFFFFFFIFFINQILLIAQRILLKQVDYFSVLQLVLLSIPQFL 67 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PF ++ V+ ++ N E+L I ++G S + P++ +++ S+ F++ + Sbjct: 68 LYTFPFSSLTASSMVIGDLSGNNEILAIRSSGISLKHVFIPIIIISLAFSMLTFLTADKA 127 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P ++L L L N + + + ++K NT+ I + ++ Sbjct: 128 LPWSTKKYRELYTDLMRDLPTLELMANSTNTIAN--TVMVNKGVEGNTVHDIILFETSSV 185 Query: 182 QTHKIYYAQSGSI 194 + +I A + Sbjct: 186 RGGQILSAPKAEV 198 >gi|293412357|ref|ZP_06655080.1| predicted protein [Escherichia coli B354] gi|291469128|gb|EFF11619.1| predicted protein [Escherichia coli B354] Length = 359 Score = 91.9 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 56/369 (15%), Positives = 129/369 (34%), Gaps = 21/369 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK--------FKSYTLQTE 231 +A+S +I+ D+ IL+ G H+K K+ F S L+ Sbjct: 181 DLSLESYIFARSATIEDDKT-WILH-GVNHKKWLNGKETLETSDNLAWQSAFTSMDLEEL 238 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S +T ++ + + +L + YR ++L Q + + L+++ Sbjct: 239 SMPGNTFSVRQLNHYIHYL--------QETGQPSSEYRLALWEKLGQPILTLAMILLAVP 290 Query: 292 AADK--RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 R+ + + L + + P L + ++ Sbjct: 291 FTFSAPRSPGMGSRLAVGVIAGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALS 350 Query: 350 FLLMIKKKY 358 + +++ Sbjct: 351 LVYWYDRQH 359 >gi|94311741|ref|YP_584951.1| permease YjgP/YjgQ [Cupriavidus metallidurans CH34] gi|93355593|gb|ABF09682.1| predicted permease [Cupriavidus metallidurans CH34] Length = 387 Score = 91.9 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 55/377 (14%), Positives = 130/377 (34%), Gaps = 39/377 (10%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + +E Y R I F ++ + +L + V SL + PT Sbjct: 4 LSVYERYFARLIYGVFAFILFAVLALFVFFDMLSELESVQGKYTSLIAFFHVM-LEAPTR 62 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + V + + +E I G + + + LA+ L++ FI Sbjct: 63 IYEVLPIAVLISAIYVFSQLASQSEYTIFRVAGLNTRQALFSLFKLAVPLALATFIFGEF 122 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-----------LYIKISKYNPNNT 169 I P +++ +A A S ++ + D ++ + P+ + Sbjct: 123 IGPAAEQYAQKIKLEAIGATVSSGFRSGVWVKDRDREPEEKGAGEITRFVNVQGLRPDQS 182 Query: 170 LQGIFIVD-SRDTQTHKIYYAQSGSIDLDRQ----------AIILNDGE-VHRKSPISKD 217 + G+ I + +D + I A+ G + I L DG+ + ++ D Sbjct: 183 ITGVTIYEFDKDYRLRVIRVAKEGKYQGGQSWQLNDVNETRFIELRDGQPAANRDALAPD 242 Query: 218 IS--IMKFKSYTLQTESANS--STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFH 273 ++F + + +E S ++++ + + L + + + Y F Sbjct: 243 FRGEQVQFPNILMHSELTPQILSVLLVQPENMSTVNLFR-YIRHLRDNKQDTQRYEIAFW 301 Query: 274 KRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP 333 K++ L + +++ A + + + G+ G S+ H Sbjct: 302 KKVVYPLTLFVMVALALPFAYL--------HARAGAVGVKVFGGIMLGLSF--HLSNTLF 351 Query: 334 YYIPILYLFLFCISSIF 350 ++ +L+ + +S++ Sbjct: 352 SHVGLLHTWPPIVSALV 368 >gi|317486218|ref|ZP_07945052.1| permease YjgP/YjgQ family protein [Bilophila wadsworthia 3_1_6] gi|316922517|gb|EFV43769.1| permease YjgP/YjgQ family protein [Bilophila wadsworthia 3_1_6] Length = 357 Score = 91.9 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 44/356 (12%), Positives = 112/356 (31%), Gaps = 9/356 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+ + L + + + + + +R++ + S+ ++L +P V Sbjct: 1 MSLLFRYLTKNNAMILLPTLAVGIGLYVLTDLFERLDNFIEAGLSVGMVLTYFVVKMPLV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P F + T L M R+ EL + G S + ++ I Sbjct: 61 ISQILPVIFLLSTVIQLCIMARSRELTALQAGGISLGVVANSMILCGIFWGGVQLGFSEY 120 Query: 121 IEPKCRST-IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + + + + + + ++++F D D + + +P G + Sbjct: 121 LGVAGERESARIWQEEVRKKNLAATVLKDVWFT-DGDWIVSLGTLDPQAHGTGFSGYELS 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 D Q+ + + L D V+ +++ E+ + Sbjct: 180 DDGLSIKRIVQASTFTAEPNHWALQDVRVYTPDTFTQEQEPDFVLPLRQDPETFRLVSTG 239 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 K L L + + +E R+ +H +L ++ ++ Sbjct: 240 TKPQQLPLWQLGD-AISQLKSSGSNVEALRTAWHAKLAYAASILVMAFVATAIV-----S 293 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + ++L +F F + + Q P L + + ++F + Sbjct: 294 WKDNIYIAVTVALLCTFLYFAV-YTLGTTLGQRGILHPFLAAWTANLIALFFAFWR 348 >gi|320195129|gb|EFW69758.1| Permease Ygh-P2, YjgP/YjgQ family [Escherichia coli WV_060327] Length = 359 Score = 91.9 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 58/366 (15%), Positives = 132/366 (36%), Gaps = 26/366 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDNDIIGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD--------ISIMKFKSYTLQTE 231 YA+S +I+ D+ IL+ G H+K K+ F S L+ Sbjct: 181 DLSLESYIYARSATIEDDKT-WILH-GVNHKKWLNGKETLETSDNLAWQSTFTSMNLEEL 238 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S +T ++ + + +L + YR ++L Q + + L+++ Sbjct: 239 SMPGNTFSVRQLNHYIHYL--------QETGQPSSEYRLALWEKLGQPILTLAMILLAVP 290 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-----FLFCI 346 + R + + + + + + +++ P+ L F+ Sbjct: 291 F--TFSAPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVA 348 Query: 347 SSIFLL 352 S+ Sbjct: 349 LSLVYW 354 >gi|331654590|ref|ZP_08355590.1| putative permease [Escherichia coli M718] gi|331047972|gb|EGI20049.1| putative permease [Escherichia coli M718] Length = 386 Score = 91.9 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 56/366 (15%), Positives = 130/366 (35%), Gaps = 26/366 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 28 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 87 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I + G S + L IL ++ L + Sbjct: 88 LVELSPFIALLGGIVGLGQLSKNSELTAIRSMGFSIFRIALVALVAGILWTVSLGAIDEW 147 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 148 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 207 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD--------ISIMKFKSYTLQTE 231 YA+S +I+ D+ +L+ G H+K K+ F S L+ Sbjct: 208 DLSLESYIYARSATIEDDKT-WVLH-GVNHKKWLNGKETLETLDNLAWQSAFTSMDLEEL 265 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S +T ++ + + +L + YR ++L Q + + L+++ Sbjct: 266 SMPGNTFSVRQLNHYIHYL--------QETGQPSSEYRLALWEKLGQPILTLAMILLAVP 317 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-----FLFCI 346 + R + + + + + + +++ P+ L F+ Sbjct: 318 F--TFSAPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPIAFVLVA 375 Query: 347 SSIFLL 352 S+ Sbjct: 376 LSLVYW 381 >gi|91977435|ref|YP_570094.1| permease YjgP/YjgQ [Rhodopseudomonas palustris BisB5] gi|91683891|gb|ABE40193.1| permease YjgP/YjgQ [Rhodopseudomonas palustris BisB5] Length = 361 Score = 91.9 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 53/359 (14%), Positives = 114/359 (31%), Gaps = 14/359 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y S L + + + + + S ++ + S Y +P + Sbjct: 3 MNTLGRYFAARFVTSALGVFFGLFVLLVFVDYIDLLRRAGGLAVSALVIAQASFYRVPQL 62 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + PFC + +++R+ EL+I G S + P L+ A+ L +F N Sbjct: 63 LERLMPFCILIGGMTCYLALSRSLELVIARAAGLSAWEFVSPALWSALALGVFASAVFNP 122 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF----FRLDDDLYIKISKYNPNN-TLQGIFI 175 + + KQ+ A+ + S + + F + I ++ L GI + Sbjct: 123 MSAYMQERAKQMEAELFGQGSGSLQDASGFWMNQVSPEGQSIINAARSQQQGAVLSGISV 182 Query: 176 V-DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 D Q A+ ++ +L D V R + S + F A Sbjct: 183 FRFEPDFQFKDRIEAREAVLEPGH--WLLRD--VRRYTLDSAPVQEDTF-RLPTALTLAQ 237 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + L + + + YR ++HK L + ++ ++ + A+ Sbjct: 238 VRNSFATPESVSFWQLPSYIRASESS-GFATSGYRLQYHKLLAKPF--LLAAMVMLAASV 294 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 R + + F ++ + + C+ + + Sbjct: 295 SLRFFRFGGVQKMVLSGVGAGFLLYILSKVTEDLSKAELMHPLAAAWLPVCVGGLAGFL 353 >gi|73542370|ref|YP_296890.1| permease YjgP/YjgQ [Ralstonia eutropha JMP134] gi|72119783|gb|AAZ62046.1| permease YjgP/YjgQ [Ralstonia eutropha JMP134] Length = 383 Score = 91.9 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 55/373 (14%), Positives = 135/373 (36%), Gaps = 35/373 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 ++ +E Y R + F+ ++ + +L + V+ SL + + PT Sbjct: 4 LRVYERYFARQVYGVFVFILFAVLSLFVFFDLLSELENVNGKYTSLIAFVHVL-LQAPTR 62 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + V + + +E I G + + + LA+ L++ FI Sbjct: 63 IYEVLPIAVLISAIYVFSQLASQSEYTIFRVAGLNTRQALFSLFKLAVPLALITFIFGEF 122 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD--------LYIKISKYNPNNTLQG 172 I P+ +++ +A A S ++ + D ++ ++ P+ T+ G Sbjct: 123 IGPRAEQFAQKIKLEAIGATVSSGFRSGVWVKDRDKDPAGGEITRFVNVAGLRPDQTITG 182 Query: 173 IFIVDSRDT-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-------------DI 218 I + + + I + G Q+ +L+D R S + + Sbjct: 183 ITVYEFDAQYRLRVIRVVKEGRYQ-GAQSWLLSDVNETRFSELRQPGTASRDGLAPEFRA 241 Query: 219 SIMKFKSYTLQTE-SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLT 277 ++F S T+ +E + +++L ++ + L + + + Y F K++ Sbjct: 242 EQVRFPSVTMHSELTPQILSVLLVTPERMSTLDLFRYIRHLRDNKQDTQRYEIAFWKKVV 301 Query: 278 QWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP 337 L + +++ A + + + G+ G S+ H ++ Sbjct: 302 YPLTLFVMMALALPFAYL--------HARAGAVGVKVFGGIMLGLSF--HLSNTLFSHVG 351 Query: 338 ILYLFLFCISSIF 350 +L+ + +S++ Sbjct: 352 LLHTWPPIVSALV 364 >gi|261416540|ref|YP_003250223.1| permease YjgP/YjgQ family protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372996|gb|ACX75741.1| permease YjgP/YjgQ family protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|302327353|gb|ADL26554.1| putative membrane protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 366 Score = 91.9 bits (227), Expect = 2e-16, Method: Composition-based stats. Identities = 58/373 (15%), Positives = 124/373 (33%), Gaps = 24/373 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK F Y++ + FL+ V I VI + I S + + +P + Sbjct: 1 MK-FSRYLIWNFLKMFLIVVCGAVLIFVVIDFVGNIKTWLSR--DMKAVTDYYLSYLPYI 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++TP + + +M R+ E+ + ++G S + P+ FL +L+SI + Sbjct: 58 LYLITPVALFIAVLASVGNMARHLEMSAMQSSGQSPFKTLLPIFFLGVLMSIGSYEMSEH 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEEN---LFFRLDDDLYIKISKYNPNNTLQGIFIVD 177 P ++ ++E F + + + Y+ N L ++ Sbjct: 118 WLPDANHKRFEIMETNAQKRKNPRIKEKQDFTFIDSEKNSWFF-KHYSGKNKLGRDVVLL 176 Query: 178 SRDTQT-------HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ- 229 R+ I + + S+ D +G HR + + + +++ Sbjct: 177 VRERGRLVERYDVRSIRWIEKDSVTKDG-FWRFENG-FHRVFKKDGSVDVFPVRQKSMKG 234 Query: 230 --TESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGL 287 N + D+ S ++ + E + + + +I L Sbjct: 235 KVNTHPNDLINERQLPDEMDSKMVKARIDVLRRSGEDTRAMETALQFKYSAHWMNLIVLL 294 Query: 288 ISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--FC 345 I AA R + L + F + I K+ +N P + F Sbjct: 295 IG--AALCHRYSRSGGLSQKFGVGLLLVFSYYILER-IGLKMGENGALSPFWAAWNSHFI 351 Query: 346 ISSIFLLMIKKKY 358 + + +M+ + + Sbjct: 352 YAGLAFVMLYRSF 364 >gi|53718605|ref|YP_107591.1| putative permease [Burkholderia pseudomallei K96243] gi|167814687|ref|ZP_02446367.1| putative permease protein [Burkholderia pseudomallei 91] gi|167909936|ref|ZP_02497027.1| putative permease protein [Burkholderia pseudomallei 112] gi|52209019|emb|CAH34959.1| putative permease protein [Burkholderia pseudomallei K96243] Length = 383 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 50/381 (13%), Positives = 124/381 (32%), Gaps = 28/381 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRLYERYFARQIYVTFIFVLFAFSGLFFFFDLISELNSVGHGNYKFGYAVLRVALQAPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ ++ + + + I ++ Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLVKIGVPIVIATYLIGEF 120 Query: 121 IEPKC-----RSTIKQLSAKAQLALTFSYLEENLFFRLDDD----LYIKISKYNPNNTLQ 171 I P R ++ L + ++ D+ ++ + +P++T+ Sbjct: 121 IGPYSDQLSERVRLEALGSSVSTNFASGVWVKDTLTARDNGEPVTRFVNVGTLSPDSTIS 180 Query: 172 GIFIVD-SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD------------- 217 + I + + A+ G +L D + + ++ + Sbjct: 181 DVRIYEFDSKFNLQNVRIAKRGHYQP-PGHWLLTDVTDTQLTSLAGNGTASPVDTLNPVY 239 Query: 218 -ISIMKFKSYTLQTE-SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKR 275 + Y+L+++ + +++L + ++ F L + + + Y ++ Sbjct: 240 RAQQVTLPQYSLRSDLTPQILSVLLVSPERMSLFNLFRYIQHLKENQQDTQRYDIALWRK 299 Query: 276 LTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY 335 L + ++S+ A I L +SF +F I + N + Sbjct: 300 LLYPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLFNTLFSHIGTL--NTWP 357 Query: 336 IPILYLFLFCISSIFLLMIKK 356 P+ CI L K Sbjct: 358 APLTAALPGCIYLALGLFALK 378 >gi|305664654|ref|YP_003860941.1| hypothetical protein FB2170_00060 [Maribacter sp. HTCC2170] gi|88707355|gb|EAQ99601.1| hypothetical protein FB2170_00060 [Maribacter sp. HTCC2170] Length = 341 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 50/346 (14%), Positives = 122/346 (35%), Gaps = 14/346 (4%) Query: 20 CLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTS 79 L + I + + ++I + + N ++ + ++ P + + Sbjct: 2 LLLFIPIGIMANLAEQIGKMIDNDAPTNEIIIYYVNFTIYIGSLLFPIFLFLSIIFFTSK 61 Query: 80 MNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLA 139 + NTE++ I ++G S ++P L A ++++ + + I P + K Sbjct: 62 LASNTEIVAILSSGVSYNRFLRPYLIGASIVALIMLVMAMFIVPNASIGYNEFKFKYLKK 121 Query: 140 LTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RDTQTHKIYYAQSGSIDLD 197 + N+F +L++ +I + ++P F + D A S Sbjct: 122 GKQDRVTSNIFNQLNESDFIYVKSFDPARQNANQFTFERFNEDNTLDFKISANSIRWIEK 181 Query: 198 RQAIILNDGEVHRKSPISKDISIMKFK---SYTLQTESANSSTIVLKANDQNLSFLLNPN 254 L ++K + D +I++ K + + + + A +NL L Sbjct: 182 DSTYRLTK---YKKRKMVGDSAIIETKNRLDTLFTFKIDDLTPVSYIAETKNLFELNRFI 238 Query: 255 PNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSI 314 N + Y ++R L I +I++ ++ R+ + + + Sbjct: 239 ENQRRKGASNINNYVLVKYRRWALPLTAFILTIIAVAV---SSVKRRGGMGINLAFGIGV 295 Query: 315 SFGVFW---GFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 +F + F + + +P I+ +F + + +LL K+ Sbjct: 296 AFIYIFFDKVFGTLAEQAGFSPLLAVIIPNVVFGVLAFYLLQNAKR 341 >gi|307139669|ref|ZP_07499025.1| hypothetical protein EcolH7_16278 [Escherichia coli H736] Length = 359 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 57/366 (15%), Positives = 130/366 (35%), Gaps = 26/366 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I + G S + L IL ++ L + Sbjct: 61 LVELSPFVALLGGIVGLGQLSKNSELTAIRSMGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD--------ISIMKFKSYTLQTE 231 YA+S +I+ D+ IL+ G H+K K+ F S L+ Sbjct: 181 DLSLESYIYARSATIEDDKT-WILH-GVNHKKWLNGKETLETLDNLAWQSAFTSMDLEEL 238 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S +T ++ + + +L + YR ++L Q + + L+++ Sbjct: 239 SMPGNTFSVRQLNHYIHYL--------QETGQPSSEYRLALWEKLGQPILTLAMILLAVP 290 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-----FLFCI 346 + R + + + + + + +++ P+ L F+ Sbjct: 291 F--TFSAPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPIAFVLVA 348 Query: 347 SSIFLL 352 S+ Sbjct: 349 LSLVYW 354 >gi|304311790|ref|YP_003811388.1| Predicted permease YjgP/YjgQ [gamma proteobacterium HdN1] gi|301797523|emb|CBL45743.1| Predicted permease YjgP/YjgQ [gamma proteobacterium HdN1] Length = 352 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 54/357 (15%), Positives = 117/357 (32%), Gaps = 8/357 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + YI + S L IV + V + + + + + + L+ IP Sbjct: 1 MRLLDRYIGVSVLTSVAGMLLLIVGLDVVFSFIGELEDLKNQYQ-MPQALQYILLTIPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L + +EL +I G S + ++ + +L+ + + Sbjct: 60 VYDYVPVATLIGCLIGLGMLANTSELTVIRAAGVSVMRIVWSAVKPVLLVVVGALVLGQY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI--FIVDS 178 + PK Q + + + N F+ + D + ++ + + G+ ++ D Sbjct: 120 VVPKT-EQYAQGLRTLWIDGSDTISSRNGFWYREGDEFFHVNAIQTDGVVYGLARYVFDG 178 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 D + + YA+ G + D L + R + M+ ++ Q S + Sbjct: 179 -DQRLLEAEYAERGVFEGDH--WRLENVRRTRFDQDHTQYATMESSTWRSQITPQLMSLV 235 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 VLK +L+ L + Y + F K+ Q ++ I+I Sbjct: 236 VLKPTALSLTDLYTFARYRDQQSISSGQFYYA-FWKKTLQPATTIVMVFIAISFIFGPLR 294 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + I + + F I + P I + L+ + Sbjct: 295 SVTMGQRLITGIIVGLVFTYAQDMLGHISVVYNVPPLIAAGLPIAIFLGVGIKLLRR 351 >gi|301325677|ref|ZP_07219138.1| conserved hypothetical protein [Escherichia coli MS 78-1] gi|300847532|gb|EFK75292.1| conserved hypothetical protein [Escherichia coli MS 78-1] Length = 359 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 58/366 (15%), Positives = 130/366 (35%), Gaps = 26/366 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L + +N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLAKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK--------FKSYTLQTE 231 YA+S +I+ D+ IL+ G H+K K+ F S L+ Sbjct: 181 DLSLESYIYARSATIEDDKT-WILH-GVNHKKWLNGKETLETSDNLAWQSAFTSMNLEEL 238 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S +T ++ + + +L + YR ++L Q + + L+++ Sbjct: 239 SMPGNTFSVRQLNHYIHYL--------QETGQPSSEYRLALWEKLGQPILTLAMILLAVP 290 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-----FLFCI 346 + R + + + + + + +++ P+ L F+ Sbjct: 291 F--TFSAPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPIAFMLVA 348 Query: 347 SSIFLL 352 S+ Sbjct: 349 LSLVYW 354 >gi|120434961|ref|YP_860647.1| hypothetical protein GFO_0597 [Gramella forsetii KT0803] gi|117577111|emb|CAL65580.1| conserved hypothetical protein, membrane [Gramella forsetii KT0803] Length = 341 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 44/345 (12%), Positives = 119/345 (34%), Gaps = 9/345 (2%) Query: 18 MSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVL 77 M + + I + + ++I+ + + + ++ P + Sbjct: 1 MMLVLFIPIGITVNLAEKIDKILENEVPFIEVAYYYLDFTIYFANLLFPIFLFLSVIWFT 60 Query: 78 TSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQ 137 + + NTE++ ++G S ++P L A ++ I + + P+ + + Sbjct: 61 SKLAMNTEIVAFLSSGVSFYRFLRPYLIGATIVCISALVLAMYLAPQASKGFNEFKYQYL 120 Query: 138 LALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF-IVDSRDTQTHKIYYAQSGSIDL 196 + +++ +++D+ YI S + P + F + + A + Sbjct: 121 KRGEQTQETSDVYRQINDNEYIYASHFQPKSKSARNFTLEHFEGNELKFKISASNLRYSE 180 Query: 197 DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPN 256 + L+ + I M+ L E + A N + L Sbjct: 181 EDSLYKLSRVDKRIIGKEEDSIMFMRSLDTILPFEFDELTPESYIAETLNYTELNEFIEK 240 Query: 257 NPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISF 316 + Y +KR + + I +I++ A + R+ + + ++++F Sbjct: 241 ERRRGSGNINRYLVVAYKRWSIPISAFILTIIAVAVA---SFKRRGGMGVNLAVGITLAF 297 Query: 317 GVFWGFSYIIHKIEQNPYYIPILYLFL----FCISSIFLLMIKKK 357 +F F + + + + P++ ++ F + ++ LL K+ Sbjct: 298 -IFIFFDKVFGTMAEQSTFSPLIAVWFPNIVFGVLAVVLLFRAKR 341 >gi|126441903|ref|YP_001058063.1| hypothetical protein BURPS668_1013 [Burkholderia pseudomallei 668] gi|126221396|gb|ABN84902.1| putative membrane protein [Burkholderia pseudomallei 668] Length = 383 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 50/381 (13%), Positives = 124/381 (32%), Gaps = 28/381 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRLYERYFARQIYVTFIFVLFAFSGLFFFFDLISELNSVGHGNYKFGYAVLRVALQAPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ ++ + + + I ++ Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLVKIGVPIVIATYLIGEF 120 Query: 121 IEPKC-----RSTIKQLSAKAQLALTFSYLEENLFFRLDDD----LYIKISKYNPNNTLQ 171 I P R ++ L + ++ D+ ++ + +P++T+ Sbjct: 121 IGPYSDQLSERVRLEALGSSVSTNFASGVWVKDTLTARDNGEPVTRFVNVGTLSPDSTIS 180 Query: 172 GIFIVD-SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD------------- 217 + I + + A+ G +L D + + ++ + Sbjct: 181 DVRIYEFDSKFNLQNVRIAKRGHYQP-PGHWLLTDVTDTQLTSLAGNGAASPVDTLNPVY 239 Query: 218 -ISIMKFKSYTLQTE-SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKR 275 + Y+L+++ + +++L + ++ F L + + + Y ++ Sbjct: 240 RAQQVTLPQYSLRSDLTPQILSVLLVSPERMSLFNLFRYIQHLKENQQDTQRYDIALWRK 299 Query: 276 LTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY 335 L + ++S+ A I L +SF +F I + N + Sbjct: 300 LLYPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLFNTLFSHIGTL--NTWP 357 Query: 336 IPILYLFLFCISSIFLLMIKK 356 P+ CI L K Sbjct: 358 APLTAALPGCIYLALGLFALK 378 >gi|300931863|ref|ZP_07147160.1| conserved hypothetical protein [Escherichia coli MS 187-1] gi|331664593|ref|ZP_08365499.1| putative permease [Escherichia coli TA143] gi|300460286|gb|EFK23779.1| conserved hypothetical protein [Escherichia coli MS 187-1] gi|331058524|gb|EGI30505.1| putative permease [Escherichia coli TA143] Length = 359 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 58/366 (15%), Positives = 131/366 (35%), Gaps = 26/366 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK--------FKSYTLQTE 231 +A+S SI+ D+ IL+ G H+K K+ F S L+ Sbjct: 181 DLSLESYIFARSASIEDDKT-WILH-GVNHKKWLNGKETLETSDNLAWQSAFTSMNLEEL 238 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S +T ++ + + +L + YR ++L Q + + L+++ Sbjct: 239 SMPGNTFSVRQLNHYIHYL--------QETGQPSSEYRLALWEKLGQPILTLAMILLAVP 290 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-----FLFCI 346 + R + + + + + + +++ P+ L F+ Sbjct: 291 F--TFSAPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVA 348 Query: 347 SSIFLL 352 S+ Sbjct: 349 LSLVYW 354 >gi|306816678|ref|ZP_07450810.1| hypothetical protein ECNC101_08669 [Escherichia coli NC101] gi|331659261|ref|ZP_08360203.1| putative permease [Escherichia coli TA206] gi|305850243|gb|EFM50702.1| hypothetical protein ECNC101_08669 [Escherichia coli NC101] gi|315297644|gb|EFU56921.1| conserved hypothetical protein [Escherichia coli MS 16-3] gi|331053843|gb|EGI25872.1| putative permease [Escherichia coli TA206] Length = 359 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 58/366 (15%), Positives = 131/366 (35%), Gaps = 26/366 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDNDIIGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD--------ISIMKFKSYTLQTE 231 YA+S +I D+ IL+ G H+K K+ F S L+ Sbjct: 181 DLSLESYIYARSATIKDDKT-WILH-GVNHKKWLNGKETLETSDNLAWQSTFTSMNLEEL 238 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S +T ++ + + +L + YR ++L Q + + L+++ Sbjct: 239 SMPGNTFSVRQLNHYIHYL--------QETGQPSSEYRLALWEKLGQPILTLAMILLAVP 290 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-----FLFCI 346 + R + + + + + + +++ P+ L F+ Sbjct: 291 F--TFSAPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVA 348 Query: 347 SSIFLL 352 S+ Sbjct: 349 LSLVYW 354 >gi|121591646|ref|ZP_01678888.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|121546494|gb|EAX56709.1| conserved hypothetical protein [Vibrio cholerae 2740-80] Length = 338 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 51/341 (14%), Positives = 124/341 (36%), Gaps = 6/341 (1%) Query: 18 MSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVL 77 M + V ++ +I+ ++++ V + L L IP + M P + L Sbjct: 1 MVLVTFVGLSGIIKYVEQLRKVGEGSYDLLQALLFVVLSIPRDVEMFFPMAALLGALIGL 60 Query: 78 TSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQ 137 ++ ++EL+++ G S++ + VL AI L I + + P+ + + + A A Sbjct: 61 GALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIIVTLLGEWGAPQAQKMARDMRAFAT 120 Query: 138 LALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLD 197 + ++ R +D +I I+K + + + + +++ + Sbjct: 121 SGGAIMSVRTGVWARDAND-FIFIAKVENEHLYGLNLWRFDENKKLSTVIFSEQVDYVAN 179 Query: 198 RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--STIVLKANDQNLSFLLNPNP 255 + ++ D + R +IS Y +T A + + +K + +L+ L + Sbjct: 180 NE-WLMKDAVLTRL-VNDIEISKESLPEYRWRTSLAPDKLAVVTVKPEELSLTGLSD-YV 236 Query: 256 NNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSIS 315 + + Y +++TQ + + L+++ + S Sbjct: 237 HYLKASEQDSSRYELALWRKVTQPISIAVMMLMALSFIFGPLRSVTMGARILSGVIAGFS 296 Query: 316 FGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 F + F + + P L L ++ L+ +K Sbjct: 297 FYISSEFFGPLSLVYGLPPLFGALAPSLVFLAIALGLLGRK 337 >gi|189485655|ref|YP_001956596.1| permease YjgP/YjgQ family protein [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287614|dbj|BAG14135.1| permease YjgP/YjgQ family protein [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 361 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 62/371 (16%), Positives = 127/371 (34%), Gaps = 24/371 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YI + + FL + I + + ++ ++ NL + ++L +P Sbjct: 1 MKILYKYITKIFVKIFLFTTAVIALVGIISELFRQTNLYIDNKTPFYLILIHLLSDMPWW 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + L +++N E+ I G + +I + ++ F + Sbjct: 61 LIQALPISALLALLFALGDLSKNNEITAIKAAGINISRIIILFFIMGFVIGTGDFAIKEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLD----DDLYIKISKYN-PNNTLQGIFI 175 I PK K + + + E F+ L + I I N N ++ I + Sbjct: 121 IVPKTSLYNKAIEKEKIQKEKINIKTE--FYSLIVPALSNTRITIDHLNTEENVMKNIAV 178 Query: 176 VDSRDT-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 D + + A+ G + D + +L +G + + + F+ Y Sbjct: 179 EKYSDKFKIEHLILAEVGIWEND--SWLLKNGIIRNFNANFWN--ETYFEQYNSNIHIKP 234 Query: 235 S----STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 + + N+ L N + R + R ++ +I I Sbjct: 235 EHMAMAIQDVNYETMNMHAL-KKYINQLRLFGQTTVRERIILNIRFAAVYAYIVVMMIGI 293 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL----FCI 346 A + KI ++++ + ++WG I + +N P + +L F Sbjct: 294 PFAIGFEN--KLGKILSSTLAMTAAL-IYWGTQAITKSLGENLILSPFIAAWLPNLIFSA 350 Query: 347 SSIFLLMIKKK 357 I+LL+ KK Sbjct: 351 IGIYLLIKVKK 361 >gi|145300688|ref|YP_001143529.1| permease [Aeromonas salmonicida subsp. salmonicida A449] gi|142853460|gb|ABO91781.1| predicted permease [Aeromonas salmonicida subsp. salmonicida A449] Length = 356 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 58/358 (16%), Positives = 135/358 (37%), Gaps = 9/358 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI R I S L+ L +V +A +I+ ++++ V + L +P Sbjct: 3 GILDRYIGRVIFMSILLCELTLVGLAALIKYVEQLKSVGEGNYDMINALYYVLLSMPKEA 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + L + ++EL+++ G S+I+++ L AI L I + + + Sbjct: 63 VQFFPLAALLGGLIGLGQLATSSELVVMQAAGRSKISIVMAALKTAIPLMILVGLMGEYV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-DSRD 180 P + + A A + ++ R ++ ++ I+ + L GI + + + Sbjct: 123 APIAKRMADDVKAGALSEGRLTVSAYGVWARDGNN-FVNINGVRNDGALTGITLYRFTPE 181 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK-SYTLQTESANSSTIV 239 + I A+ G ++ +L ++ R ++ +S + + ++ + + Sbjct: 182 RKLIDILQAREG--VFEQHHWLLKQVQITRFDDPAQILSETQAQMEWSSELTPKQLGVVS 239 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADKRA 297 + + ++ LL+ + + Y+ E ++L L V L++ + R+ Sbjct: 240 IDPENLPVAGLLD-YIGYLDANKQDAGRYKLEMWRKLLSPLSVVAMILLASSFIFGPLRS 298 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + + I ++ F I P I LF S ++L K Sbjct: 299 VSMGARMLMGIMTGFAVYVSDRV-FGPISLVYAVPPILAAIAPSLLFGGISFYILSRK 355 >gi|157155522|ref|YP_001464443.1| YjgP/YjgQ permease [Escherichia coli E24377A] gi|193067447|ref|ZP_03048415.1| putative permease, YjgP/YjgQ family [Escherichia coli E110019] gi|260869741|ref|YP_003236143.1| hypothetical protein ECO111_3808 [Escherichia coli O111:H- str. 11128] gi|157077552|gb|ABV17260.1| putative permease, YjgP/YjgQ family [Escherichia coli E24377A] gi|192959404|gb|EDV89839.1| putative permease, YjgP/YjgQ family [Escherichia coli E110019] gi|257766097|dbj|BAI37592.1| conserved predicted membrane protein [Escherichia coli O111:H- str. 11128] gi|323178688|gb|EFZ64264.1| hypothetical protein ECOK1180_2420 [Escherichia coli 1180] Length = 359 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 57/366 (15%), Positives = 129/366 (35%), Gaps = 26/366 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD--------ISIMKFKSYTLQTE 231 YA+S +I D+ +L+ G H+K K+ F S L+ Sbjct: 181 DLSLESYIYARSATIKDDKT-WVLH-GVNHKKWLNGKETLETLDNLAWQSAFTSMNLEEL 238 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S +T ++ + + +L + YR ++L Q + + L+++ Sbjct: 239 SMPGNTFSVRQLNHYIHYL--------QETGQPSSEYRLALWEKLGQPILTLAMILLAVP 290 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-----FLFCI 346 R + + + + + + +++ P+ L F+ Sbjct: 291 FTFTAP--RSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVA 348 Query: 347 SSIFLL 352 S+ Sbjct: 349 LSLVYW 354 >gi|317402625|gb|EFV83184.1| membrane protein [Achromobacter xylosoxidans C54] Length = 392 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 55/346 (15%), Positives = 122/346 (35%), Gaps = 25/346 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M++ Y+ R I RS + + ++ + ++ ++ V S+ LL + IPT Sbjct: 1 MRTARRYLAREIYRSCAVVLMALLGLFTFFALVDDLDNV-GDKFSMMALLYMQALAIPTR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L + + EL+I+ +G S + L++ + + I L I + Sbjct: 60 LYDLLPIGLLIGAILALAGLAQRNELVILRVSGVSGMRLLRMLWIVTIPLMIGAALLSEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFR----LDDDLYIKISKYNPNNTLQGIFIV 176 + P + + + L +F+ I I+ + + G+ + Sbjct: 120 VTPWAEMKSGEANLMFRGKAGGDRLNSGYWFKEPTANGGTRIINIAALQGDGQVTGVTLY 179 Query: 177 D-SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKS------------PISKDISIMKF 223 + +D + A +G ++L D R P + ++K Sbjct: 180 EFKKDLTLSVLSTAPNGLFAHGD--LVLKDVSETRLDDNAAETLADARPPKNPPAVVVKV 237 Query: 224 KSYTLQTESANSS--TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLF 281 T+ T + VL ++ LL+ N + + + ++L Sbjct: 238 PERTVDTTLSAERLLARVLTPERMSIVTLLDYVDYLRNNQLQYGRQVVA-LWRKLAYPFT 296 Query: 282 PVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH 327 ++ +I+I A R+ +FI + + G F ++ Sbjct: 297 LLV--MITIAAPIGLMQTRRGGVGAKVFIGILLGVGFFMLNQLALN 340 >gi|313203772|ref|YP_004042429.1| permease yjgp/yjgq family protein [Paludibacter propionicigenes WB4] gi|312443088|gb|ADQ79444.1| permease YjgP/YjgQ family protein [Paludibacter propionicigenes WB4] Length = 367 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 48/349 (13%), Positives = 127/349 (36%), Gaps = 16/349 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 +K + YI++ ++ S + I+ I+ V I ++++ S L I+L IP Sbjct: 11 LKRIDTYIIKKFLGTYFFSIVLILSISVVFDITEKLDNFVSHNAPLKAIVLDYYLNFIPF 70 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + M +P + + M NTE++ I ++G S L+ P + A +++ F Sbjct: 71 YMNMFSPLFTFIAVIFFTSKMATNTEIIAILSSGVSFRRLMLPYMISAAVIATISFTLGG 130 Query: 120 IIEPKCRSTI----KQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI 175 + P + + + + + + E + + + I ++ +N F Sbjct: 131 FVIPHGTKKMLDFEDKYVRQIKQSNATNLQME-----VAKGVIMYIGRFEVSNNTGYQFS 185 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 ++ + +T + +++ + + + I+ K T+ + Sbjct: 186 LEKFEGKTLASRLTAETITWDSLYSWKISNYLQRDFNGMREQITKGISKDTTIMVQPEEF 245 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 +A ++ L + ++ + +++KR + L I LI + Sbjct: 246 YITAAEAPQMSIVKLGSYLKRQRERGVGNIKLFEDDYYKRFSMPLAAFIMTLIGVSL--- 302 Query: 296 RALVRQRKKIHPIFISLSISF-GVFWGFSYIIHKIEQNPYYIPILYLFL 343 R+ + + + + ++ ++ FS + N +++ Sbjct: 303 --SSRKVRGGMGLHLGVGLALSAIYILFSAMSTSFSVNGSMSAFAAVWI 349 >gi|170018762|ref|YP_001723716.1| permease YjgP/YjgQ family protein [Escherichia coli ATCC 8739] gi|297517383|ref|ZP_06935769.1| hypothetical protein EcolOP_07055 [Escherichia coli OP50] gi|300916914|ref|ZP_07133617.1| conserved hypothetical protein [Escherichia coli MS 115-1] gi|300923636|ref|ZP_07139664.1| hypothetical protein HMPREF9548_01829 [Escherichia coli MS 182-1] gi|300950817|ref|ZP_07164703.1| conserved hypothetical protein [Escherichia coli MS 116-1] gi|300958360|ref|ZP_07170501.1| hypothetical protein HMPREF9547_04074 [Escherichia coli MS 175-1] gi|312972760|ref|ZP_07786933.1| conserved hypothetical protein [Escherichia coli 1827-70] gi|169753690|gb|ACA76389.1| permease YjgP/YjgQ family protein [Escherichia coli ATCC 8739] gi|242378535|emb|CAQ33321.1| ybl135 [Escherichia coli BL21(DE3)] gi|284923006|emb|CBG36098.1| putative permease [Escherichia coli 042] gi|300314944|gb|EFJ64728.1| hypothetical protein HMPREF9547_04074 [Escherichia coli MS 175-1] gi|300415884|gb|EFJ99194.1| conserved hypothetical protein [Escherichia coli MS 115-1] gi|300420077|gb|EFK03388.1| hypothetical protein HMPREF9548_01829 [Escherichia coli MS 182-1] gi|300449912|gb|EFK13532.1| conserved hypothetical protein [Escherichia coli MS 116-1] gi|310332702|gb|EFP99915.1| conserved hypothetical protein [Escherichia coli 1827-70] gi|323936016|gb|EGB32311.1| permease YjgP/YjgQ family protein [Escherichia coli E1520] gi|323941919|gb|EGB38098.1| permease YjgP/YjgQ family protein [Escherichia coli E482] gi|332344938|gb|AEE58272.1| conserved hypothetical protein [Escherichia coli UMNK88] Length = 359 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 57/366 (15%), Positives = 130/366 (35%), Gaps = 26/366 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I + G S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSMGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD--------ISIMKFKSYTLQTE 231 YA+S +I+ D+ IL+ G H+K K+ F S L+ Sbjct: 181 DLSLESYIYARSATIEDDKT-WILH-GVNHKKWLNGKETLETLDNLAWQSAFTSMDLEEL 238 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S +T ++ + + +L + YR ++L Q + + L+++ Sbjct: 239 SMPGNTFSVRQLNHYIHYL--------QETGQPSSEYRLALWEKLGQPILTLAMILLAVP 290 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-----FLFCI 346 + R + + + + + + +++ P+ L F+ Sbjct: 291 F--TFSAPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPIAFVLVA 348 Query: 347 SSIFLL 352 S+ Sbjct: 349 LSLVYW 354 >gi|325269119|ref|ZP_08135739.1| hypothetical protein HMPREF9141_0948 [Prevotella multiformis DSM 16608] gi|324988506|gb|EGC20469.1| hypothetical protein HMPREF9141_0948 [Prevotella multiformis DSM 16608] Length = 405 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 51/361 (14%), Positives = 123/361 (34%), Gaps = 16/361 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 + + YI+R +++ + L I+ IA V + ++ + I+ IP Sbjct: 45 IGILDWYIIRKFIGTYIYAILLIISIAIVFDFNENLSKFTQYHAPWRAIVFDYYANFIPY 104 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + G S L++P + +L++ F + Sbjct: 105 YSNLFSPLFVFIAVIFFTSKLAGNSEIIAMLAAGVSIKRLMRPYMISCVLIAGLTFYLNS 164 Query: 120 IIEPKC---RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFI 175 + P R + L ++ + ++ + + I Y+ G + Sbjct: 165 FVIPHGTVIRQNFESLYRNSKKNTSAENVQ----LYVSKNTTAYIQHYDNQYKRGYGFSL 220 Query: 176 VDSRDTQTHKIYYAQS---GSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 V +D + A ++ + L++ + + + I K L E Sbjct: 221 VKIKDKKIVSHMTAMEIQYDTVADTKFHWRLSNWKTRTLKGLKEHIQSGASKDTVLLMEP 280 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + + LL+ + + Y EFHKR+ I +I + Sbjct: 281 TDLVYSKGQQETFTSPELLDYISKQTSRGSGNVVQYEVEFHKRIAMSFSSFILTIIGLSL 340 Query: 293 ADKRALVRQRKKIHPIFISLSISFG-VFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + ++ R+ + I L++SF + I+ + + ++ + I Sbjct: 341 SSRK---RKGGMGLYLGIGLALSFSYIMLQTVSSTFAIQSDTPPLLAAWIPNIIFAVIAY 397 Query: 352 L 352 Sbjct: 398 F 398 >gi|331643680|ref|ZP_08344811.1| putative permease [Escherichia coli H736] gi|331037151|gb|EGI09375.1| putative permease [Escherichia coli H736] Length = 386 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 57/366 (15%), Positives = 130/366 (35%), Gaps = 26/366 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 28 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 87 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I + G S + L IL ++ L + Sbjct: 88 LVELSPFVALLGGIVGLGQLSKNSELTAIRSMGFSIFRIALVALVAGILWTVSLGAIDEW 147 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 148 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 207 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD--------ISIMKFKSYTLQTE 231 YA+S +I+ D+ IL+ G H+K K+ F S L+ Sbjct: 208 DLSLESYIYARSATIEDDKT-WILH-GVNHKKWLNGKETLETLDNLAWQSAFTSMDLEEL 265 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S +T ++ + + +L + YR ++L Q + + L+++ Sbjct: 266 SMPGNTFSVRQLNHYIHYL--------QETGQPSSEYRLALWEKLGQPILTLAMILLAVP 317 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-----FLFCI 346 + R + + + + + + +++ P+ L F+ Sbjct: 318 F--TFSAPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPIAFVLVA 375 Query: 347 SSIFLL 352 S+ Sbjct: 376 LSLVYW 381 >gi|237747611|ref|ZP_04578091.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] gi|229378973|gb|EEO29064.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] Length = 381 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 57/385 (14%), Positives = 129/385 (33%), Gaps = 31/385 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y L I RS L + + ++ ++ V L +L P Sbjct: 1 MKILQRYFLSQILRSVLFVLFAFLGLFAFFDLIGELSSVGRGGYQLQHVLIYILLGFPGY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + PF + T L N+E I+ + S + + + ++ +F F+ + Sbjct: 61 IYELMPFAVLIGTIYALAMFASNSEYTIMRVSSLSTLDACWMLAKVGLVFLVFTFLVGEV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLD---DDL--------YIKISKYNPNNT 169 I P + ++ + D + ++ + K P+ T Sbjct: 121 ITPVSARVATEFRNNLIGRAVGDGFRTGMWSKDTIRKDGIDGPVIGSRFMNVKKMQPDGT 180 Query: 170 LQGIFIVDSRDT-QTHKIYYAQSGSIDLD---------RQAIILNDGEVHRKSPISKDIS 219 L+ I + + D + K A++ + + + + + + ++ Sbjct: 181 LEQIRLYEFNDNLELTKTVSAKNARYLGNHEWQLNEVVESHLTAANTKNKKFPDSAPSLN 240 Query: 220 IMKFKSYTL--QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLT 277 K S + S I + AN + L N + + +Y+ F K++ Sbjct: 241 TKKLDSLIMVSDITPDILSVISVDANKMSAYELAIYN-QHLVENKQDATSYQMAFWKKI- 298 Query: 278 QWLFPV-IFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN---P 333 ++P +F ++++ R IF + I + H N P Sbjct: 299 --IYPFSVFVMMALALPFAYLHFRSGGVSLKIFSGIMIGVAFILINNLFSHVGLLNTWPP 356 Query: 334 YYIPILYLFLFCISSIFLLMIKKKY 358 + ++ LF +S++ L +++ Sbjct: 357 FLTAVIPSALFFLSAVIALWWVERH 381 >gi|26249547|ref|NP_755587.1| hypothetical protein c3716 [Escherichia coli CFT073] gi|254162933|ref|YP_003046041.1| hypothetical protein ECB_02855 [Escherichia coli B str. REL606] gi|26109955|gb|AAN82160.1|AE016766_248 Hypothetical protein c3716 [Escherichia coli CFT073] gi|253974834|gb|ACT40505.1| conserved hypothetical protein [Escherichia coli B str. REL606] gi|253978989|gb|ACT44659.1| conserved hypothetical protein [Escherichia coli BL21(DE3)] gi|309703415|emb|CBJ02754.1| putative permease [Escherichia coli ETEC H10407] Length = 386 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 57/366 (15%), Positives = 130/366 (35%), Gaps = 26/366 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 28 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 87 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I + G S + L IL ++ L + Sbjct: 88 LVELSPFIALLGGIVGLGQLSKNSELTAIRSMGFSIFRIALVALVAGILWTVSLGAIDEW 147 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 148 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 207 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD--------ISIMKFKSYTLQTE 231 YA+S +I+ D+ IL+ G H+K K+ F S L+ Sbjct: 208 DLSLESYIYARSATIEDDKT-WILH-GVNHKKWLNGKETLETLDNLAWQSAFTSMDLEEL 265 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S +T ++ + + +L + YR ++L Q + + L+++ Sbjct: 266 SMPGNTFSVRQLNHYIHYL--------QETGQPSSEYRLALWEKLGQPILTLAMILLAVP 317 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-----FLFCI 346 + R + + + + + + +++ P+ L F+ Sbjct: 318 F--TFSAPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPIAFVLVA 375 Query: 347 SSIFLL 352 S+ Sbjct: 376 LSLVYW 381 >gi|317493504|ref|ZP_07951925.1| YjgP/YjgQ permease [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918447|gb|EFV39785.1| YjgP/YjgQ permease [Enterobacteriaceae bacterium 9_2_54FAA] Length = 359 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 58/364 (15%), Positives = 137/364 (37%), Gaps = 24/364 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK F Y++R I F + ++ + ++ ++ VS + + +P Sbjct: 1 MKIFSRYLIRNIFIGFAAAAGLLIPLFTTFNLMNELDDVSPGGYHWTQAVVVVLMTLPRS 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + PF + L ++++ EL I TG S + L ++L++ L + Sbjct: 61 LIDLGPFIALLGGIVGLGQLSKSMELTAIRTTGFSIFRISIVALCAGLMLTVSLGAIDEW 120 Query: 121 IE-PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 I P + ++ +A L + + N+ + + ++ + + +N G+ I R Sbjct: 121 IASPLEQRALQMKNAAIALDESNDSVG-NILWARQGNEFVTVKSLSEDNQPVGVEIFYYR 179 Query: 180 -DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK-------FKSYTLQTE 231 D YAQ +I LD +L+ R + + + F TL+ Sbjct: 180 PDRSLESYIYAQKATI-LDGNIWMLSGINEKRWVSGKETVETKESLQWKSIFTGMTLKEL 238 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 + SST +K +Q +++L N + + ++ ++L + + + L++I Sbjct: 239 TMPSSTFSIKQLNQYITYLQNTD--------QPSIEFKIALWQKLGRAILTLAMILLAIP 290 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH---KIEQNPYYIPILYLFLFCISS 348 ++ R + I + + + + +++ N + + + Sbjct: 291 F--TFSVPRSPGLGSRLAIGVIVGLFTYISYQIVVNVGLLFSLNAAIVTLTPPAFILAIA 348 Query: 349 IFLL 352 + L+ Sbjct: 349 LVLV 352 >gi|24213174|ref|NP_710655.1| permease [Leptospira interrogans serovar Lai str. 56601] gi|45656313|ref|YP_000399.1| hypothetical protein LIC10413 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24193889|gb|AAN47673.1| permease [Leptospira interrogans serovar Lai str. 56601] gi|45599547|gb|AAS69036.1| conserved hypothetical protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 386 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 41/363 (11%), Positives = 117/363 (32%), Gaps = 11/363 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 ++ + Y+ + F+ + + + I + + + +++ + Y IP + Sbjct: 25 LRILDKYLFGEFFKIFIGTVILLTGIMLLSLVNDNLRNFTATKAPRYHVALFLVYSIPKI 84 Query: 61 LPM-VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + V + + N EL+ + G S ++ P++ IL+ I + ++ Sbjct: 85 ISTTVVSMSLMFSICFTVGQFSVNKELVSMMAAGVSFFRIVTPLILFGILMWIIMLLATE 144 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIF--IV 176 +I K + F + + + Y+P+ + G F I Sbjct: 145 LIVRPVNKLAKIEHDTLTEGMGTLANSVYQFHVKGKEGFYYLYFYDPDKDEINGGFNYIR 204 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDG-EVHRKSPISKDISIMKFKSYTLQTESANS 235 D + + + + + + E H + + + E + Sbjct: 205 LRPDGSPETVISSLKAKYNYETKLWKMKKVEEWHFDNDLKLSSQETYEEKEYELPEEPSY 264 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + + ++ F L + +E H + +I LI +A Sbjct: 265 FKVPAGSVEEMNLFQLKEEEKRRIQKGLAYGDVLTEKHSVFALPMMTIIVTLIGTIA--- 321 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI--LYLFLFCISSIFLLM 353 ++ + + I++ + +++ F+ + +N P +++ + M Sbjct: 322 GYFTKKTAGVASLGITIGVVL-IYYIFNSAGKSLGENGVIPPFAGVWITPSLFLGLCFWM 380 Query: 354 IKK 356 ++ Sbjct: 381 FRR 383 >gi|114326914|ref|YP_744071.1| hypothetical protein GbCGDNIH1_0250 [Granulibacter bethesdensis CGDNIH1] gi|114315088|gb|ABI61148.1| hypothetical membrane spanning protein [Granulibacter bethesdensis CGDNIH1] Length = 355 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 59/360 (16%), Positives = 127/360 (35%), Gaps = 8/360 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E Y ++ +S + + + +++ +Q++ V + IP Sbjct: 1 MKK-ERYAAMAALKAVGLSAIALTALFSLLEFVQQLASVGQGRYGMLDAAIYVALTIPYR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V P + T L + RN EL + G S +I V+ +I L + LF+ Sbjct: 60 LLQVFPVSMLIGTLLGLGGLARNGELTALRGLGMSERRIILSVIAFSIPLMVILFLMAQF 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SR 179 + P + + + A T ++ F+ D ++ I + ++ I I + Sbjct: 120 VIPPAQREAQTWRSNALPDTTALRSQD-SFWAYGDRHFLNIQHFEHHDEPYNIDIFSFAP 178 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 D + H+ +AQS I + + +L+D V ++ + + T Sbjct: 179 DGELHRYLHAQSADILPNDR-WVLHD--VLSRTLVDGQLRKAHLDRLDWTPFLTPQQTQF 235 Query: 240 LKANDQNLSFL-LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 L+ + L L ++ R Y E +++ L + + + Sbjct: 236 LRLRPDAMPPLALWRYVHSLKQRGLQAIRYEQELWAKISIPLTMMAMVIAATPFVFGGGR 295 Query: 299 VRQRKKIHPIFISLSISFGVFWGFS-YIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 V+ + ++ + F + S ++ + NP + L I L +++ Sbjct: 296 VQNTGAFIALGAAIGVVFTLVQQISGHLDVLLNLNPAVTALTPPVLLMWLGIDLFYRRQR 355 >gi|297623245|ref|YP_003704679.1| permease YjgP/YjgQ family protein [Truepera radiovictrix DSM 17093] gi|297164425|gb|ADI14136.1| permease YjgP/YjgQ family protein [Truepera radiovictrix DSM 17093] Length = 374 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 52/366 (14%), Positives = 110/366 (30%), Gaps = 38/366 (10%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y+LR + L S L +A R+ + L +L +PT + Sbjct: 2 RLDRYLLRECLPALLFSLLLYSGLAVTSANFPRLQWII--GTPLWGMLGWLALQLPTAIV 59 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + + ELL + G + L P+L L +L + + Sbjct: 60 QTLPIALLLAVLLTFGRLAAANELLAVQAGGVALRRLSAPMLALGLLAAGCALAMNQWVL 119 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + L + + + E L + L + + L G+ + R Sbjct: 120 PRANVRVGALWWELTSGGSGLFRLERQSIPLGEFSLSFAATDRRTD-DLFGVRLEAWRGR 178 Query: 182 QTHKIYYAQSGSIDLDRQAII-----------LNDG------------EVHRKSPISKDI 218 Q + A+ + L DG +H ++P Sbjct: 179 QL-SVVLAERARFVEGGLELYGYQNAVLDVGSLRDGAGTPEAQLQALVRLHNRAPSPDAP 237 Query: 219 SIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQ 278 + F + S + L + N+P+ FH++L + Sbjct: 238 LRITFAE-DVDELITRFSGGGFEDTRSVTRTL--RDANDPSLSAAERRAAAVLFHRKLAE 294 Query: 279 WLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 + +++ A + + LS++ + W + ++ +P+ Sbjct: 295 PFANLTLLAVALPLAVL------HARSRSVAFGLSLAVTLAWYLLLTLGQLLAQAGVLPV 348 Query: 339 LYLFLF 344 +L L+ Sbjct: 349 -WLGLW 353 >gi|163785437|ref|ZP_02180046.1| hypothetical protein HG1285_10847 [Hydrogenivirga sp. 128-5-R1-1] gi|159879293|gb|EDP73188.1| hypothetical protein HG1285_10847 [Hydrogenivirga sp. 128-5-R1-1] Length = 313 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 51/331 (15%), Positives = 108/331 (32%), Gaps = 19/331 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK F Y+ + FL I + Q+L +++ + + + + Sbjct: 1 MKLFYKYLAKKFFYYFLTFLGIISLLIISSQMLNLPSIL--YHLDIFKFFQSILLINISF 58 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + F +A+ + + N E+ I + G S+ +K ++ L I+ + Sbjct: 59 LKLQFLFAYALSFLFLGYYLRENREIYAIYSAGISKNNFLKFIIGLNIIAVVVGLFISLY 118 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + PK + L+ F L D + +S + ++ + I + Sbjct: 119 VVPKANRERIKFITVNVKKYFLEALQPKNFTTLPGDYIVYVSDKDKE-KMKNVVIY---N 174 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + A+ +IL +G + P + + +K Y Sbjct: 175 QKNGFLITAKKAFFK--GTNLILYEGMLQ--VPSKHGFNALIYKRYIFDLNI--EYEKKY 228 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 D L LL ++ N SE R+ + + F I + + Sbjct: 229 SIEDFRLKDLLTIAVSSNNSEKLKAIAVLSE---RIA---YVLPFLFIPTMFFFIGLNIS 282 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQ 331 + + + ++L I Y+I IE+ Sbjct: 283 KDRDF-ILSVALGILVIYISINYYLIKLIEK 312 >gi|194436708|ref|ZP_03068808.1| putative permease, YjgP/YjgQ family [Escherichia coli 101-1] gi|256024435|ref|ZP_05438300.1| hypothetical protein E4_13754 [Escherichia sp. 4_1_40B] gi|194424190|gb|EDX40177.1| putative permease, YjgP/YjgQ family [Escherichia coli 101-1] Length = 359 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 59/369 (15%), Positives = 133/369 (36%), Gaps = 21/369 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK--------FKSYTLQTE 231 +A+S SI+ D+ IL+ G H+K K+ F S L+ Sbjct: 181 DLSLESYIFARSASIEDDKT-WILH-GVNHKKWLNGKETLETSDNLAWQSAFTSMDLEEL 238 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S +T ++ + + +L + YR ++L Q + + L+++ Sbjct: 239 SMPGNTFSVRQLNHYIHYL--------QETGQPSSEYRLALWEKLGQPILTLAMILLAVP 290 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + R + + + + + + +++ P+ L L + Sbjct: 291 F--TFSAPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLMA 348 Query: 352 LMIKKKYTK 360 L + Y + Sbjct: 349 LSLVYWYDR 357 >gi|218691270|ref|YP_002399482.1| hypothetical protein ECED1_3629 [Escherichia coli ED1a] gi|218428834|emb|CAR09635.1| conserved hypothetical protein; putative membrane protein [Escherichia coli ED1a] Length = 386 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 58/366 (15%), Positives = 131/366 (35%), Gaps = 26/366 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 28 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 87 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 88 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 147 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + + N+ + + ++ + N G+ I RD Sbjct: 148 VASPLQQQALQIKSTATALGEDNDIIGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 207 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD--------ISIMKFKSYTLQTE 231 YA+S +I D+ IL+ G H+K K+ F S L+ Sbjct: 208 DLSLESYIYARSATIKDDKT-WILH-GVNHKKWLNGKETLETSDNLAWQSTFTSMNLEEL 265 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S +T ++ + + +L + YR ++L Q + + L+++ Sbjct: 266 SMPGNTFSVRQLNHYIHYL--------QETGQPSSEYRLALWEKLGQPILTLAMILLAVP 317 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-----FLFCI 346 + R + + + + + + +++ P+ L F+ Sbjct: 318 F--TFSAPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVA 375 Query: 347 SSIFLL 352 S+ Sbjct: 376 LSLVYW 381 >gi|307824319|ref|ZP_07654545.1| permease YjgP/YjgQ family protein [Methylobacter tundripaludum SV96] gi|307734699|gb|EFO05550.1| permease YjgP/YjgQ family protein [Methylobacter tundripaludum SV96] Length = 357 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 33/201 (16%), Positives = 76/201 (37%), Gaps = 3/201 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R I + L++ L ++ + + ++ + L + P+V Sbjct: 1 MNVLTGYIVREILKGSLVATLLLLTLFNLFTFSDQLKDLGKGHYGLTEIFYYLALTSPSV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + +L +M N EL+ + G S + +I+ V+ ++L + + Sbjct: 61 FYELMPASALLGSLFILGAMGNNRELIAMRAAGLSILGIIRAVMLAGLILVVVSILVGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLA-LTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P + + A ++ L+ R +I + K + L I I + Sbjct: 121 VAPVAERAAQMIKVNAVDEGRVVMNVKYGLWLREGKK-FINVRKMQDDGNLADISIYELD 179 Query: 180 DTQT-HKIYYAQSGSIDLDRQ 199 D + +A+ ++Q Sbjct: 180 DQRRLRYSIHAEKAVFQGNQQ 200 >gi|15836744|ref|NP_297432.1| hypothetical protein XF0139 [Xylella fastidiosa 9a5c] gi|9104925|gb|AAF82952.1|AE003867_6 conserved hypothetical protein [Xylella fastidiosa 9a5c] Length = 361 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 37/233 (15%), Positives = 93/233 (39%), Gaps = 7/233 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L +SF+ + + ++ + ++ + ++ +LL G + Sbjct: 1 MPKLDRYLLSDFTQSFIATLIVLMLVGVGGVLVDILGSIADGHFPAKLLLSQLGLRFISY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP++ P + L + R++E+ +I + G ++ +L L + + + + + Sbjct: 61 LPLLLPLALMLGLLLSLGRLYRDSEMAVITSIGVGPGRMLPSILGLVLPVVVLIGVCSLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSR 179 + P T L +A ++ + LE F + D + +S + + T L +F+ + Sbjct: 121 LAPWANRTANDLLEQANRSIIMAGLEAGTFTPMPDGGVVYLSSLSSDGTKLNAVFMQSQK 180 Query: 180 DTQTHKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISK--DISIMKFKSYT 227 D + + A+ G + + + L DG+ + ++ F Sbjct: 181 DGRIA-VVTAKRGEMYVQGDKGRYLRLEDGQRVDGPADGAALNYRVLTFARND 232 >gi|291296584|ref|YP_003507982.1| permease YjgP/YjgQ family protein [Meiothermus ruber DSM 1279] gi|290471543|gb|ADD28962.1| permease YjgP/YjgQ family protein [Meiothermus ruber DSM 1279] Length = 377 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 60/367 (16%), Positives = 116/367 (31%), Gaps = 51/367 (13%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YILR FL V + +L R + T L+ +LK +P Sbjct: 1 MTRLDRYILREAWPVFLFGLALYVGFGLISNLLPRAQWM--GTAELSSILKWLALQVPYA 58 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 P + + R ELL++ G S + +P L +LLS F Sbjct: 59 TVQAMPIAGLLAVMLAFGRLARENELLVMQAGGISVLRTARPFLLGGLLLSGFSLALSEW 118 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENL--FFRLDDDLYI------KISKYNPNNTLQG 172 + P L + E F + +L + + Q Sbjct: 119 VVPWANRA-------TALVYWNELIPERTPQFNLVGRELTVGEYILRYEGFDPAKDEFQR 171 Query: 173 IFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKS------PISKDISIMK---- 222 + + + QT + AQ+ + Q I+L D V P + + Sbjct: 172 VRL-ERWQNQTMTVILAQTARLQ--GQRIVLRDYRVFTLDFAQLPLPEFASLEQAEAGLQ 228 Query: 223 --FKSYTLQTESANSSTIVLKANDQ--------------NLSFLLNPNPNNPNYRPELLE 266 F++ + A + + ++ + LS +P P L Sbjct: 229 QIFRAQNIGQPGAELTVRLSRSREDLEVQYAGGGFEVPVPLSE-WWRKLQDPRTPPRELR 287 Query: 267 TYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYII 326 ++++H + L ++ ++++ A +RA + ++L ++ + FS Sbjct: 288 EAKAQWHAAIALALANLMVLVLALPVAVRRATS----PGTALGLALVLTIAYYVAFSAGK 343 Query: 327 HKIEQNP 333 P Sbjct: 344 VLALSGP 350 >gi|255020900|ref|ZP_05292956.1| hypothetical protein ACA_1122 [Acidithiobacillus caldus ATCC 51756] gi|254969691|gb|EET27197.1| hypothetical protein ACA_1122 [Acidithiobacillus caldus ATCC 51756] Length = 357 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 44/359 (12%), Positives = 115/359 (32%), Gaps = 4/359 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + + R + + ++ + +V ++ + + + L+ +P + Sbjct: 1 MKRADRLLFRGMLGYSTLVLFVLLALMFVANLIAKSGGPGHGSWDMGKLVTYISLQLPDL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + ++ +N ++EL+ + +G S L +P+L++ + ++ F Sbjct: 61 AYNLIPLALLLGALIWVSLLNSHSELVALRMSGWSLWRLQRPLLWVGLWGALLTFALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 + P + + A F L + + D I+I + L+G+ IV + Sbjct: 121 VVPYTAPAAEAIWANGGQGSGFQALPDGGVWLRQGDQLIQIRAIAADGRRLEGLRIVITT 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + A L + H + + + + ++ + + Sbjct: 181 PSLDAVTRMLDAREALYRDGAWQLQGVQSHVLGAQRIVSTTLVQQPWDVRLDPGTLRSFS 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L L + N + + F KR+T ++ +I +V Sbjct: 241 HPTRTMTLPAL-WESYQNLQGSVLSMNRFALAFWKRVTYPWVGLV--MIWLVVPLVTRNP 297 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 R I + L + + +F + + +++ Y Sbjct: 298 RGGGLAGRILMGLVLGLAFHFLTEMSGFISISGGIPPVFATVFPLALFASIAWGLQRYY 356 >gi|300993118|ref|ZP_07180204.1| hypothetical protein HMPREF9553_04258 [Escherichia coli MS 200-1] gi|300305133|gb|EFJ59653.1| hypothetical protein HMPREF9553_04258 [Escherichia coli MS 200-1] Length = 359 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 58/366 (15%), Positives = 130/366 (35%), Gaps = 26/366 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 GASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD--------ISIMKFKSYTLQTE 231 YA+S +I+ D+ IL+ G H+K K+ F S L+ Sbjct: 181 DLSLESYIYARSATIEDDKT-WILH-GVNHKKWLNGKETLETSDNLAWQSTFTSMNLEEL 238 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S +T ++ + + +L + YR ++L Q + + L+++ Sbjct: 239 SMPGNTFSVRQLNHYIHYL--------QETGQPSSEYRLALWEKLGQPILTLAMILLAVP 290 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-----FLFCI 346 + R + + + + + + +++ P+ L F+ Sbjct: 291 F--TFSAPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVA 348 Query: 347 SSIFLL 352 S+ Sbjct: 349 LSLVYW 354 >gi|330827963|ref|YP_004390915.1| putative permease [Aeromonas veronii B565] gi|328803099|gb|AEB48298.1| Predicted permease [Aeromonas veronii B565] Length = 356 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 60/358 (16%), Positives = 132/358 (36%), Gaps = 9/358 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI R I S L+ + +V +A +I+ ++++ V + L +P Sbjct: 3 GILDRYIGRVIFMSILLCEITLVGLAGLIKYVEQLKSVGDGNYDMINALYYVLLSMPKEA 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L + ++EL+++ G S+I+++ L AI L I + + + Sbjct: 63 VLFFPLAALLGGLIGLGQLATSSELVVMQAAGRSKISIVMAALKTAIPLMIMVGLMGEYV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-DSRD 180 P + + A A + ++ R ++ ++ I+ + L GI + + + Sbjct: 123 APIAKRMADDIKAGALSEGRLTVSAYGVWARDGNN-FVNINGVRNDGALTGITLYRFTPE 181 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIV 239 + + AQ G +R +L +V R P ++ + + Sbjct: 182 RKLIDVVQAQEG--VFERHHWLLKQTQVTRFDDPAQIRSEQHDKMEWSSELTPKQLGVVS 239 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADKRA 297 + + ++S LL+ + + Y+ E ++L L V L++ + R+ Sbjct: 240 IDPENLSVSGLLD-YIGYLDANKQDAGRYKLEMWRKLLSPLSVVAMILLASSFIFGPLRS 298 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + + I ++ F I P I LF S ++L K Sbjct: 299 VSMGARMLMGIMTGFAVYVSDRV-FGPISLVYAVPPILAAIAPSLLFGGISFYILSRK 355 >gi|167835783|ref|ZP_02462666.1| hypothetical protein Bpse38_04778 [Burkholderia thailandensis MSMB43] Length = 383 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 52/381 (13%), Positives = 126/381 (33%), Gaps = 28/381 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRLYEKYFARQIYVTFIFVLFAFSGLFFFFDLISELNSVGHGNYKFGYAVLRVALQAPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ ++ + + + I ++ Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLVKIGVPIVIATYLIGEF 120 Query: 121 IEPKC-----RSTIKQLSAKAQLALTFSYLEENLFFRLDDD----LYIKISKYNPNNTLQ 171 I P R ++ L + ++ D+ ++ + K +P++T+ Sbjct: 121 IGPYSDQLSERVRLEALGSSVSTNFASGVWVKDTLTARDNGEPVTRFVNVGKLSPDSTIS 180 Query: 172 GIFIVDSRDT-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD------------- 217 + I + + A+SG +L D + + ++ + Sbjct: 181 DVRIYEFDSRFNLQNVRIAKSGRYQP-PGHWLLTDVTDTQLTSLAGNGATSPADTLSPVY 239 Query: 218 -ISIMKFKSYTLQTE-SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKR 275 + Y+L+++ + +++L + ++ F L + + + Y ++ Sbjct: 240 RAQQVTLPQYSLRSDLTPQILSVLLVSPERMSLFNLFRYIQHLKENQQDTQRYDIALWRK 299 Query: 276 LTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY 335 L + ++S+ A I L +SF +F I + N + Sbjct: 300 LLYPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLFNTLFSHIGTL--NTWP 357 Query: 336 IPILYLFLFCISSIFLLMIKK 356 P+ CI L K Sbjct: 358 APLTAALPGCIYLALGLFALK 378 >gi|110833358|ref|YP_692217.1| hypothetical protein ABO_0497 [Alcanivorax borkumensis SK2] gi|110646469|emb|CAL15945.1| membrane protein, putative [Alcanivorax borkumensis SK2] Length = 353 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 61/365 (16%), Positives = 114/365 (31%), Gaps = 21/365 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y R + L IV + + + + + + + + L+ P Sbjct: 1 MKLLKRYFWRAVMIPTLAILFIIVGLDCLFGFIYELEFLRGNYQVMEA-LQFILTTTPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 P + T L+ + + EL +I G S + + VL ++L I Sbjct: 60 FYEYMPMAILLGTLIGLSLLANSGELSVIRAAGVSTLKVSWLVLRPVLVLIILSIPLGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A+ + + R + +I I+ PN L G+ D Sbjct: 120 LTPYSEQVAQSNRSMAEGGGEALRSKYGYWHREGPE-FIHINAVQPNGVLHGLTRYRFSD 178 Query: 181 TQT-HKIYYAQSGSIDLDRQAIILNDGE------VHRKSPISKDISIMKFKSYTLQTESA 233 Q + Y + ++ G V + + Sbjct: 179 GQKLTETQYVNRAIYQGESWSLEGIQGTRLFADHVETYQKDQGEWQT--------ELTPQ 230 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IV 291 S +VLK ++ L LL + Y F ++L L + LI+ V Sbjct: 231 LLSIVVLKPDNLALVKLLEYT-RYLKRQGLETADYMLSFWQKLFMPLATIGMVLIAISFV 289 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 R + + I L +G + F + +P IL L + I+L Sbjct: 290 FGPLREVTMGLRLTAGIVAGLIFHYGQQF-FGQLSLVFHTDPLLAAILPPSLCLVLGIWL 348 Query: 352 LMIKK 356 L + Sbjct: 349 LQRVR 353 >gi|315223961|ref|ZP_07865805.1| permease YjgP/YjgQ family protein [Capnocytophaga ochracea F0287] gi|314946065|gb|EFS98070.1| permease YjgP/YjgQ family protein [Capnocytophaga ochracea F0287] Length = 358 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 49/360 (13%), Positives = 128/360 (35%), Gaps = 9/360 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL+ +F M + + I ++ + ++++ + +N +L I Sbjct: 1 MKILDWYILKRYLLTFFMMIILFIPIGIIVDLSEKVDKMIQKGAPMNEILWYYLSFIVYF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + + + NTE++ I ++G S + ++P + A ++S+ +F Sbjct: 61 ANILFPILLFLSIIWFTSKLANNTEIIAIQSSGVSYMRFLRPYIVGASIISVIVFFMGMF 120 Query: 121 IEPKCRSTIKQLSAK-AQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDS 178 I P + K + + S +L+ + D+ Y+ +S +N + + Sbjct: 121 IVPAASTVYNDFWNKYIRSSKVESV--SDLYNQFSDNDYLYVSSFNYQDKRGYNFSVEHF 178 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + A++ + L + + I + + + Sbjct: 179 DGIKMTEKINAETIQWIDSTKTYRLTNYSKRKIGEGDDVIVKRDQLDTIFNFKPDDLMPM 238 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 A ++NL L L Y ++R I LI + ++ Sbjct: 239 EYTAENKNLFELNKFIEREKMKGSPNLNMYLLVKYRRWGAISTAFILTLIGVAV---SSV 295 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--FCISSIFLLMIKK 356 ++ + + + + F + + + P++ + L ++ +L+++K Sbjct: 296 KKRGGMGINLMVGVVVGFSFVFFDRVFGTLAQSSGGLSPLMAVLLPNLIFLTLAILLLRK 355 >gi|281180020|dbj|BAI56350.1| conserved hypothetical protein [Escherichia coli SE15] gi|330909040|gb|EGH37554.1| permease Ygh-P2, YjgP/YjgQ family [Escherichia coli AA86] Length = 359 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 58/366 (15%), Positives = 130/366 (35%), Gaps = 26/366 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 GASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD--------ISIMKFKSYTLQTE 231 YA+S +I+ D+ IL+ G H+K K+ F S L+ Sbjct: 181 DLSLESYIYARSATIEDDKT-WILH-GVNHKKWLNGKETLETSDNLAWQSTFTSMNLEEL 238 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S +T ++ + + +L + YR ++L Q + + L+++ Sbjct: 239 SMPGNTFSVRQLNHYIHYL--------QETGQPSSEYRLALWEKLGQPILTLAMILLAVP 290 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-----FLFCI 346 + R + + + + + + +++ P+ L F+ Sbjct: 291 F--TFSAPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVA 348 Query: 347 SSIFLL 352 S+ Sbjct: 349 LSLVYW 354 >gi|323188591|gb|EFZ73876.1| hypothetical protein ECRN5871_3010 [Escherichia coli RN587/1] Length = 359 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 58/366 (15%), Positives = 130/366 (35%), Gaps = 26/366 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLEQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD--------ISIMKFKSYTLQTE 231 YA+S +I D+ IL+ G H+K K+ F S L+ Sbjct: 181 DLSLESYIYARSATIKDDKT-WILH-GVNHKKWLNGKETLETSDNLAWQSTFTSMNLEEL 238 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S +T ++ + + +L + YR ++L Q + + L+++ Sbjct: 239 SMPGNTFSVRQLNHYIHYL--------QETGQPSSEYRLALWEKLGQPILTLAMILLAVP 290 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-----FLFCI 346 + R + + + + + + +++ P+ L F+ Sbjct: 291 F--TFSAPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVA 348 Query: 347 SSIFLL 352 S+ Sbjct: 349 LSLVYW 354 >gi|269140437|ref|YP_003297138.1| hypothetical protein ETAE_3096 [Edwardsiella tarda EIB202] gi|267986098|gb|ACY85927.1| hypothetical protein ETAE_3096 [Edwardsiella tarda EIB202] gi|304560230|gb|ADM42894.1| Putative inner membrane protein [Edwardsiella tarda FL6-60] Length = 356 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 46/362 (12%), Positives = 121/362 (33%), Gaps = 14/362 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI R I + +M+ +V ++ +I+ + ++ V S+ + IP + Sbjct: 3 GVLDRYIGRTIFNTIMMTLFMLVSLSGIIKFVDQLRKVGQGDYSVAGAGLFTLLSIPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L + + +EL+++ G +R+ + V+ AI L + + Sbjct: 63 EIFFPMAALLGALLGLGMLAQRSELVVMQAAGFTRMQVASAVMKTAIPLVLLTMAIGEWV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SRD 180 P+ + A+ + + L+ + D + ++ I++ + TL G+ I + Sbjct: 123 APQGDQAARNYRAQQMYGGSLLSTQGGLWAK-DGNQFVYIAQVVNDRTLGGVSIYTLNAQ 181 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKS-----YTLQTESANS 235 + + YA S + D + + + D ++ + Sbjct: 182 RKLTSLRYAASATFDGKQWKL------AQVEESNLTDPKMITGSRTLSGVWKTNLTPDKL 235 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + + + ++S L + + Y+ ++ L + L+++ Sbjct: 236 GVVAVSPDSLSISGLYH-YVKYLKQSGQESSRYQLNLWSKIFAPLSVAVMMLMALSFIFG 294 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 I F V + + P I + + L+++ Sbjct: 295 PLRSVPMGVRVLTGICFGFVFYVLDQIFGPMSLVYNVPPVIGAVLPSALFLGLSVYLLLR 354 Query: 356 KK 357 + Sbjct: 355 RS 356 >gi|153827727|ref|ZP_01980394.1| conserved permease [Vibrio cholerae MZO-2] gi|149737798|gb|EDM52703.1| conserved permease [Vibrio cholerae MZO-2] Length = 256 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 99/251 (39%), Gaps = 5/251 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I + + + V ++ +I+ ++++ V + L L IP + Sbjct: 3 KILDWYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGEGSYDLLQALLFVVLSIPRDV 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L ++ ++EL+++ G S++ + VL AI L I + + Sbjct: 63 EMFFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIIVTLLGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + + A A + ++ R +D +I I+K + Sbjct: 123 APQAQKMARDMRAFATSGGAIMSVRTGVWARDAND-FIFIAKVENEQLYGLNLWRFDENK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--STIV 239 + + +++ + + ++ D + R +IS Y +T A + + Sbjct: 182 KLSTVIFSEQVDYVANNE-WLMKDAVLTRL-VNDIEISKESLPEYRWRTSLAPDKLAVVT 239 Query: 240 LKANDQNLSFL 250 +K + +L+ L Sbjct: 240 VKPEELSLTGL 250 >gi|218261075|ref|ZP_03476041.1| hypothetical protein PRABACTJOHN_01705 [Parabacteroides johnsonii DSM 18315] gi|218224239|gb|EEC96889.1| hypothetical protein PRABACTJOHN_01705 [Parabacteroides johnsonii DSM 18315] Length = 361 Score = 91.2 bits (225), Expect = 3e-16, Method: Composition-based stats. Identities = 53/346 (15%), Positives = 116/346 (33%), Gaps = 10/346 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 +K + YI++ +++ + I+ I+ V I ++I+ S L I+ IP Sbjct: 5 LKRIDWYIIKQFLGTYIFAIALIIAISVVFDINEKIDKFLSPDVPLKAIVFDYYMNFIPY 64 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + +G S L+ P A ++++ F Sbjct: 65 FANLFSPLFTFIAVIFFTSKLADNSEVIAMLASGMSFRRLMLPYAISAGIIALSTFALNA 124 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF-IVDS 178 I P +T K Y+ ++ + +Y+ + + F + Sbjct: 125 YIIPPANATRIDFQNKYIKNKKVDYVRSAQ-LEIEPGVIAYFDRYDARSGMGYRFSLEHF 183 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 D + A S D L D + + + I+ TL ++ Sbjct: 184 EDKKMISRLTANSIKYDSLYN-WTLIDYMIRDFDGMREHITEGSRLDTTLTIVPSDFLIS 242 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 V L ++T++ E+HKR + I I Sbjct: 243 VNDCETMTSPELSTYIDRQKKRGIGNIQTFQIEYHKRFAAIMAAFILTSIG-----ASLS 297 Query: 299 VRQRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLFL 343 R+ K + I + ++ + F+ + N P + ++ Sbjct: 298 SRKIKGGMGLNIGIGLALSFSYILFTTVTSTFAINGNLSPAMAAWI 343 >gi|191172563|ref|ZP_03034103.1| putative permease, YjgP/YjgQ family [Escherichia coli F11] gi|190907231|gb|EDV66830.1| putative permease, YjgP/YjgQ family [Escherichia coli F11] gi|324011926|gb|EGB81145.1| hypothetical protein HMPREF9533_04084 [Escherichia coli MS 60-1] Length = 359 Score = 90.8 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 58/366 (15%), Positives = 130/366 (35%), Gaps = 26/366 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 GASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD--------ISIMKFKSYTLQTE 231 YA+S +I+ D+ IL+ G H+K K+ F S L+ Sbjct: 181 DLSLESYIYARSATIEDDKT-WILH-GVNHKKWLNGKETLETSDNLAWQSTFTSMNLEEL 238 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S +T ++ + + +L + YR ++L Q + + L+++ Sbjct: 239 SMPGNTFSVRQLNHYIHYL--------QETGQPSSEYRLALWEKLGQPILTLAMILLAVP 290 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-----FLFCI 346 + R + + + + + + +++ P+ L F+ Sbjct: 291 F--TFSAPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPIAFVLVA 348 Query: 347 SSIFLL 352 S+ Sbjct: 349 LSLVYW 354 >gi|167621692|ref|YP_001672200.1| hypothetical protein Caul_5426 [Caulobacter sp. K31] gi|167351815|gb|ABZ74541.1| conserved hypothetical protein [Caulobacter sp. K31] Length = 230 Score = 90.8 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 36/175 (20%), Positives = 73/175 (41%), Gaps = 4/175 (2%) Query: 52 ISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLS 111 ++ L+P L + P F + V+T+++ ++E+ + G S ++ P + + +LL Sbjct: 1 MAANLLPHYLGLALPVAFFIALFIVITTLSDSSEIDALLAGGRSLTRIVAPFVVIGVLLG 60 Query: 112 IFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQ 171 +F I ++P R + + A A L F + L L Sbjct: 61 LFSVIVFGYLQPYSRYAFRSVMHAAITAGWNGRLPGRAFVEDGEQLITADESVAAGQALM 120 Query: 172 GIFIVDSRDTQTHKIYYAQSGSI----DLDRQAIILNDGEVHRKSPISKDISIMK 222 GIFI + ++ A S S+ D ++ A++L DG + +D+++ Sbjct: 121 GIFIKRPDANKREEVIAASSASLVAEPDGEKVALMLTDGRRTAQDGQGEDLALAT 175 >gi|51245020|ref|YP_064904.1| hypothetical protein DP1168 [Desulfotalea psychrophila LSv54] gi|50876057|emb|CAG35897.1| unknown protein [Desulfotalea psychrophila LSv54] Length = 362 Score = 90.8 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 44/263 (16%), Positives = 93/263 (35%), Gaps = 8/263 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+L + FL + + +I ++ + + + + L++++K + IP + Sbjct: 1 MHLLNRYLLGQFFKFFLTVAAGFIALYLLIDFFEKFDNFTEAGKPLSVVIKYFLFSIPAI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + L +N + EL + G +I+P++ +++ S Sbjct: 61 VDQLGPILILLSGVISLGVLNSSNELTALKAGGLPLRAIIRPIIIGGGAVTLLFMASAQW 120 Query: 121 IEPKCRSTIKQ-LSAKAQLALTFSYLEENL-FFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 I P + Q + N ++ + Y K N F S Sbjct: 121 ILPSTVAVTNDIWIEGVQGKTPVGIVRNNRYYYHGQEGFYSFAWKNNKEYLFAN-FSYSS 179 Query: 179 RDTQTHK--IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 D + + A S S D + + +L G + ++ + F S + Sbjct: 180 WDKEYGLKEMISATSASWDAKQNSWLLKGGVLQQQE-SRGSYTTTTFTSRKFHFPETPEA 238 Query: 237 --TIVLKANDQNLSFLLNPNPNN 257 T ++++LS LL NN Sbjct: 239 FRTPQHAESERSLSALLKGALNN 261 >gi|332753041|gb|EGJ83425.1| hypothetical protein SF434370_3220 [Shigella flexneri 4343-70] gi|332998924|gb|EGK18515.1| hypothetical protein SFVA6_3889 [Shigella flexneri VA-6] gi|333000167|gb|EGK19750.1| hypothetical protein SFK218_4002 [Shigella flexneri K-218] Length = 359 Score = 90.8 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 57/366 (15%), Positives = 131/366 (35%), Gaps = 26/366 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDGVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD--------ISIMKFKSYTLQTE 231 YA+S +I+ D+ +L+ G H+K K+ F S L+ Sbjct: 181 DLSLESYIYARSATIEDDKT-WVLH-GVNHKKWLNGKETLETLDNLAWQSAFTSMNLEEL 238 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S +T ++ + + +L + YR ++L Q + + L+++ Sbjct: 239 SMPGNTFSVRQLNHYIHYL--------QETGQPSSEYRLALWEKLGQPILTLAMILLAVP 290 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-----FLFCI 346 + R + + + + + + +++ P+ L F+ Sbjct: 291 F--TFSAPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVA 348 Query: 347 SSIFLL 352 S+ Sbjct: 349 LSLVYW 354 >gi|188995335|ref|YP_001929587.1| hypothetical protein PGN_1471 [Porphyromonas gingivalis ATCC 33277] gi|188595015|dbj|BAG33990.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC 33277] Length = 363 Score = 90.8 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 53/360 (14%), Positives = 123/360 (34%), Gaps = 10/360 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 + + Y+++ +F+ S + I+ ++ V I ++I+ SL +I+ +P Sbjct: 7 LNRLDKYLIKQFLGTFVFSIILIISVSVVFDINEKIDDFMKPEVSLRSIIFDYYFNFVPY 66 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + +E++ + + G S L+ P + A +++I F+ + Sbjct: 67 YANLFSPLFVFISVIFFTSKLAEKSEIIAMLSAGVSFKRLMVPYMLSATVIAILTFLLNS 126 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF-IVDS 178 + P +T K Y E++ + ++ Y+ F + + Sbjct: 127 FVIPPGNATRIDFQNKYIKNKKVQY-AESVQLEVKKGVFAFFGSYSDAMRTGYQFSLEEF 185 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + Q A D + + + + + + A+ Sbjct: 186 KGKQLVSRLTADRIQYDSLYN-WRIFNYRIRHFGKYKETVESGSEMDTVIAVRPADFLVA 244 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + L + ++ + E HKR I +I A+ Sbjct: 245 EDDVETMTTTDLHTYISHQKQRGVGNVKLFEIELHKRYAAIFSAFILTIIG--ASLSSRK 302 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMIKK 356 V+ I+ I I L +SF + F + + P + +L F + I + + KK Sbjct: 303 VKGGMGIN-IAIGLGLSFA-YILFMTVAGTFAISGSLPPFMAAWLPNFVFTVIAVFLYKK 360 >gi|145629199|ref|ZP_01784998.1| predicted permease [Haemophilus influenzae 22.1-21] gi|144978702|gb|EDJ88425.1| predicted permease [Haemophilus influenzae 22.1-21] Length = 270 Score = 90.8 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 33/260 (12%), Positives = 85/260 (32%), Gaps = 17/260 (6%) Query: 99 LIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLY 158 ++K L +++L + + + P + A+ T L F +++ Sbjct: 1 MVKVALIMSLLTAGIAAYNALWLSPWAIQKQVNMVEDAKANPTVGVLSSGQFISTNNNNV 60 Query: 159 IKISKYNPNNTLQGIFIVDS--RDTQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSP 213 + +N ++ +++ + + A+ G + Q + L + + + Sbjct: 61 VLFIDKIKDNQIRNVYLFQMTPQKQTKPSVITAEKGELIALPNGDQVLNLKNTKRVEGTS 120 Query: 214 ISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFH 273 D I F Y ++ + + LS L++ + ++ ++E H Sbjct: 121 ALPDFRITHFDEYHAYLGYQSAENTNDEVAELTLSQLIDLDSSSA----------KAELH 170 Query: 274 KRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP 333 R+T L + LI++ R RQ + + L S+ Sbjct: 171 WRITLILAVPLMALIAVP--LSRVNPRQGRFAKILPALLLYLIYFLLQSSFKSAGSAGKL 228 Query: 334 YYIPILYLFLFCISSIFLLM 353 ++ L + +++ Sbjct: 229 EAELLMPLVNIGFFLLAVVL 248 >gi|331648770|ref|ZP_08349858.1| putative permease [Escherichia coli M605] gi|331042517|gb|EGI14659.1| putative permease [Escherichia coli M605] Length = 386 Score = 90.8 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 58/366 (15%), Positives = 130/366 (35%), Gaps = 26/366 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 28 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 87 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 88 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 147 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 148 GASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 207 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD--------ISIMKFKSYTLQTE 231 YA+S +I+ D+ IL+ G H+K K+ F S L+ Sbjct: 208 DLSLESYIYARSATIEDDKT-WILH-GVNHKKWLNGKETLETSDNLAWQSTFTSMNLEEL 265 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S +T ++ + + +L + YR ++L Q + + L+++ Sbjct: 266 SMPGNTFSVRQLNHYIHYL--------QETGQPSSEYRLALWEKLGQPILTLAMILLAVP 317 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-----FLFCI 346 + R + + + + + + +++ P+ L F+ Sbjct: 318 F--TFSAPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVA 375 Query: 347 SSIFLL 352 S+ Sbjct: 376 LSLVYW 381 >gi|270340118|ref|ZP_06007105.2| conserved hypothetical protein [Prevotella bergensis DSM 17361] gi|270332630|gb|EFA43416.1| conserved hypothetical protein [Prevotella bergensis DSM 17361] Length = 395 Score = 90.8 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 57/366 (15%), Positives = 132/366 (36%), Gaps = 14/366 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 +K + YI++ +++ S L I+ I+ V + + + S L I+ +P Sbjct: 35 IKRIDWYIIKKFIGTYIFSILLIISISIVFDVNENLAKFSQYHAPLEAIVFDYYANFVPY 94 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + + + + + N+E++ + TG S L++P + +LL+ + Sbjct: 95 FANLFSALFVFISVIFFTSKLAGNSEIIAMLATGMSFKRLLRPYMITCVLLAGLSYYLSA 154 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQ---GIFIV 176 + P + I+Q + EN+ ++ + I Y +NT++ G + Sbjct: 155 YVIPHG-TVIRQNFETMYKNKHKNTSAENVQLQVGRGVIAYIQHY--DNTMKKGYGFCLD 211 Query: 177 DSRDTQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 + + A D + L + ++ R + + I+ K + E Sbjct: 212 KFENKKLVSHLTAMEVQYDTISDSKYHWKLTNWKIRRLKGLREHITSGAEKDSVIMMEPT 271 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + + L + + + Y+ E+HKR+ I +I A Sbjct: 272 DLVYSKGQQETFTSPELKDYISKQIDRGSGNVVQYQVEYHKRIASSFASFILTIIG---A 328 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + R+ + I L++SF + + N Y+ P+L ++ I + Sbjct: 329 SLSSRKRKGGMGMYLGIGLALSF-TYIMMQTVSATFAINAYFPPMLAAWIPNIVFAVIAF 387 Query: 354 IKKKYT 359 + ++ Sbjct: 388 VCYRHA 393 >gi|316933707|ref|YP_004108689.1| permease YjgP/YjgQ family protein [Rhodopseudomonas palustris DX-1] gi|315601421|gb|ADU43956.1| permease YjgP/YjgQ family protein [Rhodopseudomonas palustris DX-1] Length = 361 Score = 90.8 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 51/358 (14%), Positives = 108/358 (30%), Gaps = 14/358 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y R + L + + + + + S + + S +P +L Sbjct: 4 NTLGRYFARRFVVASLGVFFGLFVLLVFVDYVDLLRRAGGLAVSAFYVAQASFCRVPQLL 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PFC + +++R+ EL++ G S I P L+ AI + I N + Sbjct: 64 ERLLPFCILIGGMTCYLALSRSLELVVARAAGLSAWEFISPALWSAIAIGIVATTIFNPL 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLF----FRLDDDLYIKISKYNPNN-TLQGIFIV 176 + KQ+ A+ T + N F D I ++ L GI I Sbjct: 124 SAHMQERAKQMEAEMFGENTGGLQDANGFWMNQVNPDGQAIINAARSQQQGAVLTGITIF 183 Query: 177 -DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + Q A+ ++ +L + D M+ A Sbjct: 184 RFDPNFQFRDRIEAREAVLEPGH--WLLKSVRRYTLDSAPTDQDTME---LPTSLTLAQV 238 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + L ++ N YR ++HK L + ++ ++ + A+ Sbjct: 239 RNSFATPESVSFWQLPAYIKSSENSGFATAG-YRLQYHKLLAKPF--LLAAMVMLAASVS 295 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 R + ++ F ++ + + C+ + + Sbjct: 296 LRFFRFGGVQKMVLSGVAAGFLLYILSKVTEDLSKAELMHPLAAAWLPVCVGGLAGFL 353 >gi|53725612|ref|YP_102445.1| hypothetical protein BMA0670 [Burkholderia mallei ATCC 23344] gi|67640814|ref|ZP_00439608.1| permease YjgP/YjgQ family protein [Burkholderia mallei GB8 horse 4] gi|76811145|ref|YP_332584.1| hypothetical protein BURPS1710b_1173 [Burkholderia pseudomallei 1710b] gi|121600496|ref|YP_993650.1| hypothetical protein BMASAVP1_A2341 [Burkholderia mallei SAVP1] gi|124384824|ref|YP_001028888.1| hypothetical protein BMA10229_A2944 [Burkholderia mallei NCTC 10229] gi|126449595|ref|YP_001081199.1| hypothetical protein BMA10247_1655 [Burkholderia mallei NCTC 10247] gi|126453481|ref|YP_001065300.1| hypothetical protein BURPS1106A_1020 [Burkholderia pseudomallei 1106a] gi|134281127|ref|ZP_01767836.1| putative membrane protein [Burkholderia pseudomallei 305] gi|167003638|ref|ZP_02269424.1| putative membrane protein [Burkholderia mallei PRL-20] gi|167718521|ref|ZP_02401757.1| hypothetical protein BpseD_05832 [Burkholderia pseudomallei DM98] gi|167737553|ref|ZP_02410327.1| hypothetical protein Bpse14_05780 [Burkholderia pseudomallei 14] gi|167823141|ref|ZP_02454612.1| hypothetical protein Bpseu9_05658 [Burkholderia pseudomallei 9] gi|167844705|ref|ZP_02470213.1| hypothetical protein BpseB_05393 [Burkholderia pseudomallei B7210] gi|167893240|ref|ZP_02480642.1| hypothetical protein Bpse7_05710 [Burkholderia pseudomallei 7894] gi|167901697|ref|ZP_02488902.1| hypothetical protein BpseN_05420 [Burkholderia pseudomallei NCTC 13177] gi|167917973|ref|ZP_02505064.1| hypothetical protein BpseBC_05418 [Burkholderia pseudomallei BCC215] gi|217419559|ref|ZP_03451065.1| putative membrane protein [Burkholderia pseudomallei 576] gi|226194459|ref|ZP_03790057.1| putative membrane protein [Burkholderia pseudomallei Pakistan 9] gi|237811280|ref|YP_002895731.1| permease YjgP/YjgQ family protein [Burkholderia pseudomallei MSHR346] gi|242314384|ref|ZP_04813400.1| putative membrane protein [Burkholderia pseudomallei 1106b] gi|254177658|ref|ZP_04884313.1| putative membrane protein [Burkholderia mallei ATCC 10399] gi|254181441|ref|ZP_04888038.1| putative membrane protein [Burkholderia pseudomallei 1655] gi|254190840|ref|ZP_04897347.1| putative membrane protein [Burkholderia pseudomallei Pasteur 52237] gi|254196385|ref|ZP_04902809.1| putative membrane protein [Burkholderia pseudomallei S13] gi|254199347|ref|ZP_04905713.1| putative membrane protein [Burkholderia mallei FMH] gi|254205663|ref|ZP_04912015.1| putative membrane protein [Burkholderia mallei JHU] gi|254259902|ref|ZP_04950956.1| putative membrane protein [Burkholderia pseudomallei 1710a] gi|254357821|ref|ZP_04974094.1| putative membrane protein [Burkholderia mallei 2002721280] gi|52429035|gb|AAU49628.1| membrane protein, putative [Burkholderia mallei ATCC 23344] gi|76580598|gb|ABA50073.1| membrane protein, putative [Burkholderia pseudomallei 1710b] gi|121229306|gb|ABM51824.1| putative membrane protein [Burkholderia mallei SAVP1] gi|124292844|gb|ABN02113.1| putative membrane protein [Burkholderia mallei NCTC 10229] gi|126227123|gb|ABN90663.1| putative membrane protein [Burkholderia pseudomallei 1106a] gi|126242465|gb|ABO05558.1| putative membrane protein [Burkholderia mallei NCTC 10247] gi|134247433|gb|EBA47518.1| putative membrane protein [Burkholderia pseudomallei 305] gi|147748943|gb|EDK56017.1| putative membrane protein [Burkholderia mallei FMH] gi|147753106|gb|EDK60171.1| putative membrane protein [Burkholderia mallei JHU] gi|148026948|gb|EDK84969.1| putative membrane protein [Burkholderia mallei 2002721280] gi|157938515|gb|EDO94185.1| putative membrane protein [Burkholderia pseudomallei Pasteur 52237] gi|160698697|gb|EDP88667.1| putative membrane protein [Burkholderia mallei ATCC 10399] gi|169653128|gb|EDS85821.1| putative membrane protein [Burkholderia pseudomallei S13] gi|184211979|gb|EDU09022.1| putative membrane protein [Burkholderia pseudomallei 1655] gi|217396863|gb|EEC36879.1| putative membrane protein [Burkholderia pseudomallei 576] gi|225933544|gb|EEH29533.1| putative membrane protein [Burkholderia pseudomallei Pakistan 9] gi|237504053|gb|ACQ96371.1| permease YjgP/YjgQ family protein [Burkholderia pseudomallei MSHR346] gi|238521609|gb|EEP85059.1| permease YjgP/YjgQ family protein [Burkholderia mallei GB8 horse 4] gi|242137623|gb|EES24025.1| putative membrane protein [Burkholderia pseudomallei 1106b] gi|243060864|gb|EES43050.1| putative membrane protein [Burkholderia mallei PRL-20] gi|254218591|gb|EET07975.1| putative membrane protein [Burkholderia pseudomallei 1710a] Length = 383 Score = 90.8 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 50/381 (13%), Positives = 124/381 (32%), Gaps = 28/381 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRLYEKYFARQIYVTFIFVLFAFSGLFFFFDLISELNSVGHGNYKFGYAVLRVALQAPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ ++ + + + I ++ Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLVKIGVPIVIATYLIGEF 120 Query: 121 IEPKC-----RSTIKQLSAKAQLALTFSYLEENLFFRLDDD----LYIKISKYNPNNTLQ 171 I P R ++ L + ++ D+ ++ + +P++T+ Sbjct: 121 IGPYSDQLSERVRLEALGSSVSTNFASGVWVKDTLTARDNGEPVTRFVNVGTLSPDSTIS 180 Query: 172 GIFIVD-SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD------------- 217 + I + + A+ G +L D + + ++ + Sbjct: 181 DVRIYEFDSKFNLQNVRIAKRGHYQP-PGHWLLTDVTDTQLTSLAGNGTASPVDTLNPVY 239 Query: 218 -ISIMKFKSYTLQTE-SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKR 275 + Y+L+++ + +++L + ++ F L + + + Y ++ Sbjct: 240 RAQQVTLPQYSLRSDLTPQILSVLLVSPERMSLFNLFRYIQHLKENQQDTQRYDIALWRK 299 Query: 276 LTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY 335 L + ++S+ A I L +SF +F I + N + Sbjct: 300 LLYPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLFNTLFSHIGTL--NTWP 357 Query: 336 IPILYLFLFCISSIFLLMIKK 356 P+ CI L K Sbjct: 358 APLTAALPGCIYLALGLFALK 378 >gi|213583965|ref|ZP_03365791.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 342 Score = 90.8 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 51/346 (14%), Positives = 122/346 (35%), Gaps = 12/346 (3%) Query: 19 SCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIPTVLPMVTPFCFAMETTN 75 + + + + I++ ++ + + + L + +P + + P + Sbjct: 1 IMMTLFMLVSLSGIIKFVDQLKKAGQGNYDALGAGMYTLLSVPKDIQIFFPMAALLGALL 60 Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAK 135 L + + +EL+++ +G +R+ + V+ AI L + + P+ + A+ Sbjct: 61 GLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAPQGEQMARNYRAQ 120 Query: 136 AQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV---DSRDTQTHKIYYAQSG 192 A + ++ L+ + ++ ++ I + + L GI I D R + + YA S Sbjct: 121 AMYGGSLLSTQQGLWAKDGNN-FVYIERVKGDEELAGISIYAFNDQR--RLQSVRYAASA 177 Query: 193 SIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLL 251 D + + L+ E ++P S ++ + L + ++S L Sbjct: 178 KFDPEHKVWRLSQVDESDLQNPKQITGSQTVSGTWKTNLTPDKLGVVALDPDALSISGLH 237 Query: 252 NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFIS 311 N + Y+ ++ Q L + L+++ IS Sbjct: 238 N-YVKYLKSSGQDAGRYQFNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPMGVRVVTGIS 296 Query: 312 LSISFGVF-WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 F V F + P +L F + S++L++ K Sbjct: 297 FGFVFYVLDQIFGPLTLVYGIPPIVGALLPSASFFLISLWLMLRKS 342 >gi|256820810|ref|YP_003142089.1| permease YjgP/YjgQ family protein [Capnocytophaga ochracea DSM 7271] gi|256582393|gb|ACU93528.1| permease YjgP/YjgQ family protein [Capnocytophaga ochracea DSM 7271] Length = 358 Score = 90.8 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 49/360 (13%), Positives = 128/360 (35%), Gaps = 9/360 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL+ +F M + + I ++ + ++++ + +N +L I Sbjct: 1 MKILDWYILKRYLLTFFMMIILFIPIGIIVDLSEKVDKMIQKGAPMNEILWYYLSFIVYF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + + + NTE++ I ++G S + ++P + A ++S+ +F Sbjct: 61 ANILFPILLFLSIIWFTSKLANNTEIIAIQSSGVSYMRFLRPYIVGASIISVIVFFMGMF 120 Query: 121 IEPKCRSTIKQLSAK-AQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDS 178 I P + K + + S +L+ + D+ Y+ +S +N + + Sbjct: 121 IVPAASTVYNDFWNKYIRSSKVESV--SDLYNQFSDNDYLYVSSFNYQDKRGYNFSVEHF 178 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + A++ + L + + I + + + Sbjct: 179 NGIKMTEKINAETIQWIDSTKTYRLTNYSKRKIGEGDDVIVKRDQLDTIFNFKPDDLMPM 238 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 A ++NL L L Y ++R I LI + ++ Sbjct: 239 EYTAENKNLFELNKFIEREKMKGSPNLNMYLLVKYRRWGAISTAFILTLIGVAV---SSV 295 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--FCISSIFLLMIKK 356 ++ + + + + F + + + P++ + L ++ +L+++K Sbjct: 296 KKRGGMGINLMVGVVVGFSFVFFDRVFGTLAQTSGGLSPLMAVLLPNLIFLTLAILLLRK 355 >gi|39936125|ref|NP_948401.1| permease YjgP/YjgQ [Rhodopseudomonas palustris CGA009] gi|39649979|emb|CAE28503.1| predicted permease [Rhodopseudomonas palustris CGA009] Length = 361 Score = 90.8 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 51/358 (14%), Positives = 110/358 (30%), Gaps = 14/358 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y R + L + + + + + S + + S +P +L Sbjct: 4 NTLGRYFARRFVIASLGVFFGLFVLLVFVDYVDLLRRAGGLAVSAFYVAQASFCRVPQLL 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PFC + +++R+ EL++ G S I P L+ AI + IF N + Sbjct: 64 ERLLPFCILIGGMTCYLALSRSLELVVARAAGLSAWEFISPALWSAIAIGIFATTVFNPL 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLF----FRLDDDLYIKISKYNPNN-TLQGIFIV 176 + KQ+ A+ T + N F D I ++ L GI + Sbjct: 124 SAHMQERAKQMEAEMFGENTGGLQDANGFWMNQVSPDGQAIINAARSQQQGAVLTGITVF 183 Query: 177 -DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 D Q A+ ++ +L + + D ++ A Sbjct: 184 RFEPDFQFKDRIEAREAVLEPGH--WLLKNVRRYTMDGAPVDQDTLE---LPTSLTLAQV 238 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + L ++ N YR ++HK L + ++ ++ + A+ Sbjct: 239 RNSFATPESVSFWQLPTYIKSSENSGFATAG-YRLQYHKLLAKPF--LLAAMVMLAASVS 295 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 R + ++ F ++ + + C+ + + Sbjct: 296 LRFFRFGGVQKMVLSGVAAGFLLYILSKVTEDLSKAELMHPLAAAWLPVCVGGLAGFL 353 >gi|288928388|ref|ZP_06422235.1| membrane protein [Prevotella sp. oral taxon 317 str. F0108] gi|288331222|gb|EFC69806.1| membrane protein [Prevotella sp. oral taxon 317 str. F0108] Length = 390 Score = 90.8 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 52/361 (14%), Positives = 124/361 (34%), Gaps = 18/361 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 +K + YI+R +++ S L I+ IA V + + + + L I+ +P Sbjct: 30 LKILDWYIIRKFIGTYVFSILLIISIAIVFDVNENLAKFTQFHAPLKAIVFDYYANFVPY 89 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + +E++ + G S L++P + +L+S F Sbjct: 90 FANLFSPLFVFIAVIFFTSKLAGTSEIISMLAAGVSFNRLMRPYMVSCLLISCLSFYLSG 149 Query: 120 IIEPKC---RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + P R + + ++ + ++ ++D + I Y+ F + Sbjct: 150 YVIPHGTVIRQNFESMYKNSKKNTSAENVQ----LQVDRGVIAYIQHYDDKTKRGYGFSL 205 Query: 177 DSRDTQTHKIYYAQSG----SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 D + + + S +I + +++ + + + I+ + + E Sbjct: 206 DKFENKKLVSHMTASEIQYDTISDSKYHWQVSNWRIREMKALREKITYGDKRDTLIMMEP 265 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 A+ + L + + Y E+HKR+ I I + Sbjct: 266 ADLVFSKGQQETFTNPELSSYISKQIGRGSSNVVQYEVEYHKRIAASFASFILTTIGLSL 325 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISSI 349 + ++ R+ + I L++SFG + P + LF + + Sbjct: 326 SSRK---RKGGMGLYLGIGLALSFGYILLQTVSATFAVNANTPPMLAAWIPNLLFAVVAY 382 Query: 350 F 350 F Sbjct: 383 F 383 >gi|325860534|ref|ZP_08173638.1| permease, YjgP/YjgQ family [Prevotella denticola CRIS 18C-A] gi|327313657|ref|YP_004329094.1| permease [Prevotella denticola F0289] gi|325481919|gb|EGC84948.1| permease, YjgP/YjgQ family [Prevotella denticola CRIS 18C-A] gi|326944618|gb|AEA20503.1| permease, YjgP/YjgQ family [Prevotella denticola F0289] Length = 405 Score = 90.8 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 53/360 (14%), Positives = 124/360 (34%), Gaps = 18/360 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPTV 60 + YI+R +++ + L I+ IA V + ++ + I+ IP Sbjct: 46 GILDWYIIRKFIGTYIYAILLIISIAIVFDFNENLSKFTQYHAPWRAIVFDYYANFIPYY 105 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +P + + + N+E++ + G S L++P + +L++ F + Sbjct: 106 SNLFSPLFVFIAVIFFTSKLAGNSEIIAMLAAGVSIRRLMRPYMISCVLIAGLTFYLNSF 165 Query: 121 IEPKC---RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIV 176 + P R + L ++ + ++ + + I Y+ G +V Sbjct: 166 VIPHGTVIRQNFESLYRNSKKNTSAENVQ----LYVAKNTTAYIQHYDNQYKRGYGFSLV 221 Query: 177 DSRDTQTHKIYYAQS---GSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 +D + A ++ + L++ ++ + + I K L E Sbjct: 222 KIKDKKIVSHMTAMEIQYDTVADTKFHWRLSNWKMRTLKGLKEHIQSGASKDTVLLMEPT 281 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + + LL+ + + Y EFHKR+ I +I + + Sbjct: 282 DLVYSKGQQETFTSPELLDYISKQTSRGSGNVVQYEVEFHKRIAMSFSSFILTIIGLSLS 341 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISSIF 350 ++ R+ + I L++SF S + + P + +F + + F Sbjct: 342 SRK---RKGGMGLYLGIGLALSFSYIMLQTVSSTFAIQADTPPLLAAWIPNIIFAVIAYF 398 >gi|325282729|ref|YP_004255270.1| permease YjgP/YjgQ family protein [Deinococcus proteolyticus MRP] gi|324314538|gb|ADY25653.1| permease YjgP/YjgQ family protein [Deinococcus proteolyticus MRP] Length = 347 Score = 90.8 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 46/362 (12%), Positives = 99/362 (27%), Gaps = 21/362 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YIL + + ++M L V + + + L Y +PT+ Sbjct: 1 MSRLTRYILLDVLKWYVMGFLLFVVLQMTDVLSLTAGAFLDYNATPQQALSTLLYNLPTL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M ++E+ + G ++L+ P+ +L+ F + Sbjct: 61 LNRSLVLAVPFAVLLSFGRMQGDSEIKAMYAAGVRPLSLVWPLALPFLLVGALTFWNSGW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-----LQGIFI 175 + P + E ++ + + + L G+ + Sbjct: 121 VAPWANARWYDAWYDIYGMTPEPPTRE-MYAYSEGETLFYAGRVASGEEPQQALLSGVMV 179 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHR-KSPISKDISIMKFKSYTLQTESAN 234 + ++ A SG+ + Q L V R + F + Sbjct: 180 Q-----RGGEVITADSGTWNTATQTWTLTGAWVTRPGETPQPSAEPLTF------VQKDT 228 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + +A+ + + L +P + T + R VIF L + Sbjct: 229 LAPPRPEADQLSRAEL-RAELADPTLQGAERRTLEHQLAGRTADSFTAVIFAL-AAGLLG 286 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R + + + G P + L +F + + L Sbjct: 287 LLMPGRAWAFAAVLLVVVVYYVPWTLGPQLAAGGALT-PALVAWLPNLIFIVLAAALAWR 345 Query: 355 KK 356 + Sbjct: 346 LR 347 >gi|289209273|ref|YP_003461339.1| permease YjgP/YjgQ family protein [Thioalkalivibrio sp. K90mix] gi|288944904|gb|ADC72603.1| permease YjgP/YjgQ family protein [Thioalkalivibrio sp. K90mix] Length = 357 Score = 90.8 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 52/360 (14%), Positives = 115/360 (31%), Gaps = 7/360 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 Y++R + ++ + +V + V ++ + + + + +P + Sbjct: 3 TVLGRYVIRQVLIGTTLAVVLLVALDAVFAMIDELRDTGAGNYGVTEAMLYVALTLPRRM 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ N+EL + G + I VL +++ + + I Sbjct: 63 YEMLPPAALVGGLLWLGNLAANSELTAMRAAGMTLGRFIVWVLQAGLVVVMVMLIIGEFF 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + L A A L+ R D I N L G+ I++ Sbjct: 123 APASETRAQALKASAFDEEISVGSM-GLWAR-DGQRMIHAESVLAGNQLVGVRIIEFTGD 180 Query: 182 QTHK-IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + I A L D E S + ++ + + + + +++ Sbjct: 181 REPSWITRAARARFVDGD--WRLEDVERSLLSHD-RVVAEHRAEETIDRLIAPEYFDVLV 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 Q + L+ + Y F +R T + L++I Sbjct: 238 VEPSQMAALDLSRYIDYLRENQLDAAPYEVAFWQRFTLPASTFVMLLLAIPFLFGSQREG 297 Query: 301 QRKKIHPIFISLSISFGVFW-GFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYT 359 + I I++ +SF + +++ P L + LF ++F L T Sbjct: 298 GAGQRLFIGIAIGVSFVIVMRAITHLGLVYNLPPLLAACLPVLLFLAIALFALRRMAVRT 357 >gi|192291843|ref|YP_001992448.1| permease YjgP/YjgQ family protein [Rhodopseudomonas palustris TIE-1] gi|192285592|gb|ACF01973.1| permease YjgP/YjgQ family protein [Rhodopseudomonas palustris TIE-1] Length = 362 Score = 90.4 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 51/358 (14%), Positives = 110/358 (30%), Gaps = 14/358 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y R + L + + + + + S + + S +P +L Sbjct: 5 NTLGRYFARRFVIASLGVFFGLFVLLVFVDYVDLLRRAGGLAVSAFYVAQASFCRVPQLL 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PFC + +++R+ EL++ G S I P L+ AI + IF N + Sbjct: 65 ERLLPFCILIGGMTCYLALSRSLELVVARAAGLSAWEFISPALWSAIAIGIFATTVFNPL 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLF----FRLDDDLYIKISKYNPNN-TLQGIFIV 176 + KQ+ A+ T + N F D I ++ L GI + Sbjct: 125 SAHMQERAKQMEAEMFGENTGGLQDANGFWMNQVSPDGQAIINAARSQQQGAVLTGITVF 184 Query: 177 -DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 D Q A+ ++ +L + + D ++ A Sbjct: 185 RFEPDFQFKDRIEAREAVLEPGH--WLLKNVRRYTMDGAPVDQDTLE---LPTSLTLAQV 239 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + L ++ N YR ++HK L + ++ ++ + A+ Sbjct: 240 RNSFATPESVSFWQLPTYIKSSENSGFATAG-YRLQYHKLLAKPF--LLAAMVMLAASVS 296 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 R + ++ F ++ + + C+ + + Sbjct: 297 LRFFRFGGVQKMVLSGVAAGFLLYILSKVTEDLSKAELMHPLAAAWLPVCVGGLAGFL 354 >gi|83720791|ref|YP_441377.1| hypothetical protein BTH_I0821 [Burkholderia thailandensis E264] gi|167618241|ref|ZP_02386872.1| hypothetical protein BthaB_18181 [Burkholderia thailandensis Bt4] gi|257139950|ref|ZP_05588212.1| hypothetical protein BthaA_12230 [Burkholderia thailandensis E264] gi|83654616|gb|ABC38679.1| membrane protein, putative [Burkholderia thailandensis E264] Length = 383 Score = 90.4 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 51/381 (13%), Positives = 125/381 (32%), Gaps = 28/381 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRLYEKYFARQIYVTFIFVLFAFSGLFFFFDLISELNSVGHGNYKFGYAVLRVALQAPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ ++ + + + I ++ Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLVKIGVPIVIATYLIGEF 120 Query: 121 IEPKC-----RSTIKQLSAKAQLALTFSYLEENLFFRLDDD----LYIKISKYNPNNTLQ 171 I P R ++ L + ++ D+ ++ + +P++T+ Sbjct: 121 IGPYSDQLSERVRLEALGSSVSTNFASGVWVKDTLTARDNGEPVTRFVNVGTLSPDSTIS 180 Query: 172 GIFIVD-SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD------------- 217 + I + + A+SG +L D + + ++ + Sbjct: 181 DVRIYEFDSKFNLQNVRIAKSGRYQP-PGHWLLTDVTDTQLTNLAGNGATAPNDTLNPVY 239 Query: 218 -ISIMKFKSYTLQTE-SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKR 275 + Y+L+++ + +++L + ++ F L + + + Y ++ Sbjct: 240 RAQQVTLPQYSLRSDLTPQILSVLLVSPERMSLFNLFRYIQHLKENQQDTQRYDIALWRK 299 Query: 276 LTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY 335 L + ++S+ A I L +SF +F I + N + Sbjct: 300 LLYPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLFNTLFSHIGTL--NTWP 357 Query: 336 IPILYLFLFCISSIFLLMIKK 356 P+ CI L K Sbjct: 358 APLTAALPGCIYLALGLFALK 378 >gi|258593792|emb|CBE70133.1| putative Inner membrane protein yjgQ [NC10 bacterium 'Dutch sediment'] Length = 362 Score = 90.4 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 51/357 (14%), Positives = 120/357 (33%), Gaps = 7/357 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + +I + R + + ++ + ++ ++ ++ V T +L IP+ + Sbjct: 9 STIDRHIWFRVIRGYALVMAVLLSVFSLMALVNELDSVGRGTYTLGDAFLNVILTIPSRM 68 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + + L + + EL+ + GTS + + V ILL I + + I Sbjct: 69 IELAPTTAVLGSIIGLGELASSHELIAMQTLGTSPLRIGASVTVTGILLMIAVIGVQEWI 128 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P +A + + F+ D +I++ + P L + I + D Sbjct: 129 APSADQLAYMRRIQAISKPEALHTRQG-FWSRDGRQFIRVYQVLPGRILSNVEIYEFDDN 187 Query: 182 QT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDIS-IMKFKSYTLQTESANSSTIV 239 + +A +L D V R S + S+ + +V Sbjct: 188 HRLRLVTWAARAE-PEGSHRWVLID-VVQRMVDGGGVASKQLASLSWAGSLTPTQAELLV 245 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L A + S L + + + +++T L ++ L++I Sbjct: 246 LPAEILSRSTL-SQYIAFLKKTGQDVARLEIRLWQQMTMPLSTLMMVLVAIPFVLGPLRK 304 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 K + +F + F + I + +L L + + + + ++ Sbjct: 305 ATAGKRILHGSLIGAAFHLGSHFIAHLGAILHLNAALTVL-SPLAVLGGVTVWVYRR 360 >gi|257454351|ref|ZP_05619614.1| permease YjgP/YjgQ family protein [Enhydrobacter aerosaccus SK60] gi|257448254|gb|EEV23234.1| permease YjgP/YjgQ family protein [Enhydrobacter aerosaccus SK60] Length = 357 Score = 90.4 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 50/358 (13%), Positives = 118/358 (32%), Gaps = 16/358 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + + + + + V L + + + + L+ Y P L Sbjct: 2 ILSRYVKKQALFAMTGAIIGLWLLKVVFDYLAELQDL-NDHYNYLDALRFIAYSAPRDLL 60 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 PF + L + +EL +I G SR ++ V+ AI+ I + + Sbjct: 61 DYMPFGTLLGAVVGLGLLANTSELTVIQAAGISRFKIVGWVMQPAIIFVIIRLLLGQYVV 120 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD-T 181 P QL+ + + N ++ + I I N L+ I + D Sbjct: 121 PTSN----QLAHQVKHDKPLLSSAINGYWDKQANRIINIDHANTKGELKNIKVWQLDDNA 176 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRK------SPISKDISIMKFKSYTLQTESANS 235 ++ A +GS A + ++ + + ++ + + L E + Sbjct: 177 HIQQVLQADTGSFVSQNTADKTSGWQLQQIKQLTIAADGHSQLTTIPTMTLQLPIEPSAI 236 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAA 293 + ++ +++ L + LE + F K+L + L++ V Sbjct: 237 YLLTRSPDNMSVTELWQHQQLLAKDKRRSLEHEVA-FWKKLLAPFAMLSLVLVACSFVFG 295 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 R + + + L S+ + +P+++ +L + ++L Sbjct: 296 SLRNQSLGYRIVIALLFGLVFSYLQDLVGFVSLST-GFSPFFMVLLPIIASAALGVYL 352 >gi|167580135|ref|ZP_02373009.1| hypothetical protein BthaT_18420 [Burkholderia thailandensis TXDOH] Length = 383 Score = 90.4 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 51/381 (13%), Positives = 126/381 (33%), Gaps = 28/381 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRLYEKYFARQIYVTFIFVLFAFSGLFFFFDLISELNSVGHGNYKFGYAVLRVALQAPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ ++ + + + I ++ Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLVKIGVPIVIATYLIGEF 120 Query: 121 IEPKC-----RSTIKQLSAKAQLALTFSYLEENLFFRLDDD----LYIKISKYNPNNTLQ 171 I P R ++ L + ++ D+ ++ + +P++T+ Sbjct: 121 IGPYSDQLSERVRLEALGSSVSTNFASGVWVKDTLTARDNGEPVTRFVNVGTLSPDSTIS 180 Query: 172 GIFIVD-SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD------------- 217 + I + + A+SG +L D + + ++ + Sbjct: 181 DVRIYEFDSKFNLQNVRIAKSGRYQP-PGHWLLTDVTDTQLTNLAGNGATAPNDTLNPVY 239 Query: 218 -ISIMKFKSYTLQTE-SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKR 275 + Y+L+++ + +++L + ++ F L + + + Y ++ Sbjct: 240 RAQQVTLPQYSLRSDLTPQILSVLLVSPERMSLFNLFRYIQHLKENQQDTQRYDIALWRK 299 Query: 276 LTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY 335 L ++ ++S+ A I L +SF +F I + N + Sbjct: 300 LLYPFAVLVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLFNTLFSHIGTL--NTWP 357 Query: 336 IPILYLFLFCISSIFLLMIKK 356 P+ CI L K Sbjct: 358 APLTAALPGCIYLALGLFALK 378 >gi|256829582|ref|YP_003158310.1| permease YjgP/YjgQ family protein [Desulfomicrobium baculatum DSM 4028] gi|256578758|gb|ACU89894.1| permease YjgP/YjgQ family protein [Desulfomicrobium baculatum DSM 4028] Length = 360 Score = 90.4 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 52/365 (14%), Positives = 122/365 (33%), Gaps = 18/365 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YILR L+ C + I I + R++ + L+ + Y P + Sbjct: 1 MNLLTRYILRQNLFLLLLVCGIGLGIYVFIDLFDRLDNFLEAGVGLSSVGAYFLYRTPFI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P F + + M R+ ELL ++ S + K V++ A+ L + Sbjct: 61 LAQIFPAVFLIALMVQMGLMLRSRELLALEACSVSPGAVAKSVIWYALALCVAQLFFSEA 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP----NNTLQGIFIV 176 + +++ + + + + + + + + P L + Sbjct: 121 LGVSGHRAAERIWNEEVRDRQIEKRQLSDLWFREGNRIVHMGSVTPAAGRGLELTVHVLE 180 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 D +I AQ + +L+ V R P + ++ L+T+ ++ Sbjct: 181 DDDAGSIREIIRAQE--FTSAPEGWLLS--GVTRTLPATFEVQKAAQMELDLRTDVSSFL 236 Query: 237 TIVLKANDQNLSFL-LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + K ++L L L +E ++ +H +L ++ LI++ Sbjct: 237 IVDPKTRLESLPLLQLGAEIKRLRDSGSNIERLQTAWHMKLAYAGSVLVMALIALAVVSF 296 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF---LFCISSIFLL 352 + I ++ ++G + + P+L + F + Sbjct: 297 F------GSLFVIIPLGLVATFCYYGLFVLCASAGEKGLVPPVLAAWAANAFFTAVAGGW 350 Query: 353 MIKKK 357 +++ + Sbjct: 351 LLRGR 355 >gi|300727713|ref|ZP_07061099.1| permease, YjgP/YjgQ family [Prevotella bryantii B14] gi|299775001|gb|EFI71607.1| permease, YjgP/YjgQ family [Prevotella bryantii B14] Length = 409 Score = 90.4 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 54/367 (14%), Positives = 128/367 (34%), Gaps = 16/367 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 +K + YI++ ++ S + I+ I+ V+ I + + + L I+ IP Sbjct: 49 IKRLDWYIIKKFIGTYFFSIILIISISIVVDINENLAKFTEYHAPLKAIVFDYYANFIPY 108 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + + + + + N+E++ I G S L++P + +L+S+ + Sbjct: 109 FANLFSALFVFIAVIFFTSKLAGNSEVIAILAAGVSFKRLMRPYMISCVLISMLNYYLSA 168 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P ++Q +N+ ++D + + I Y+ L+ F Sbjct: 169 YVIPHGNV-VRQNFESLYKNKKKITSADNVMLQIDKGVIVYIQHYDD--RLKKGFGFSLD 225 Query: 180 DTQTHKIYYAQSG------SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 + K+ + +I + +++ + + + I+ K TL E Sbjct: 226 KFENKKLVDHMTAMEIQYDTISDSKYHWRMSNWKERHLRGLREHITNGNQKDTTLYMEPT 285 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + + L N + Y E+HKR+ I +I + + Sbjct: 286 DLVYSKGQQETFTSPQLKEYISKQKNRGSGNVVQYEVEYHKRIASSFASFILTIIGLSLS 345 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISSIF 350 ++ R+ + + L++SF S + + P + +F I ++F Sbjct: 346 SRK---RKGGMGMYLGVGLALSFAYIMLQTVSSTFAIQADAPPMLAAWIPNMIFAIIALF 402 Query: 351 LLMIKKK 357 + Sbjct: 403 CYKRAPR 409 >gi|255009350|ref|ZP_05281476.1| hypothetical protein Bfra3_09423 [Bacteroides fragilis 3_1_12] gi|313147107|ref|ZP_07809300.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313135874|gb|EFR53234.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 365 Score = 90.4 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 50/369 (13%), Positives = 132/369 (35%), Gaps = 19/369 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 +K +LYI++ +++ + I+ IA V ++++ + + I+ IP Sbjct: 7 IKRLDLYIIKKFLGTYVFAIALIISIAVVFDFNEKMDKFMERSAPWSAIIFDYYMNFIPY 66 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + +TG S +++P + A +++I FI + Sbjct: 67 FANLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMLRPYMISAGIIAISTFILGS 126 Query: 120 IIEPKC---RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + P+ R + K + ++ +D + I Y N F + Sbjct: 127 YVIPRGSVTRLDFEDKYVKKKKTTYVHNIQ----LEIDTGVIAYIDNYQDYNKTGNRFSL 182 Query: 177 DS-RDTQTHKIYYAQSGSIDLDR-QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 D D + A+S + D + D + + + +I++ Sbjct: 183 DKFVDKKLVSHLTARSITYDTTAVNKWTIKDYMIRNLDGLKE--TIIRGDKLDSIIPMEP 240 Query: 235 SSTIVLKANDQNLS--FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + ++++ + L+ L ++ + E+HKR+ I +I + Sbjct: 241 ADFMIMRNQQEMLTSPQLSAYIDKQRQRGIANIKEFEIEYHKRIAMSFASFILTVIGVSL 300 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF-LFCISSIFL 351 + + + + + F + N P++ ++ + ++ Sbjct: 301 ----SSRKTKGGMGLHLGIGLGLSFSYILFQTVASTFAVNGNMPPVIAMWIPNLLYALIA 356 Query: 352 LMIKKKYTK 360 + +K K Sbjct: 357 FYLYRKAPK 365 >gi|330818020|ref|YP_004361725.1| hypothetical protein bgla_1g31620 [Burkholderia gladioli BSR3] gi|327370413|gb|AEA61769.1| hypothetical protein bgla_1g31620 [Burkholderia gladioli BSR3] Length = 382 Score = 90.4 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 56/383 (14%), Positives = 134/383 (34%), Gaps = 26/383 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + + + G P+ Sbjct: 1 MRLYEKYFARQIYLTFVFVLFAFSGLFFFFDLISELNSVGHGSYNFGYAVLRVGLQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + + L I ++ Sbjct: 61 FYEIIPVATLISAIYVFAQMAANSEFTIFRVSGLATNRALRSLLKIGVPLVIVTYLIGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLD----DD-----LYIKISKYNPNNTLQ 171 I P +++ +A + S + ++ + D+ ++ + +P++T+ Sbjct: 121 IGPYTDQLSERVRLEALGSSVSSNFQSGVWVKDTLTARDNGEPVTRFVNVGTLSPDSTIS 180 Query: 172 GIFIVD-SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDIS----------- 219 + I + Q + A+SG +L D + SPI + Sbjct: 181 NVRIYEFDSKFQLQNVRIAKSGRYAP-PGHWLLTDVTDTQLSPIVPAPNTPKDALNPVYR 239 Query: 220 --IMKFKSYTLQTE-SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRL 276 + Y+L+++ + +++L + ++ F L + + + Y ++L Sbjct: 240 SEQVSMPQYSLRSDLTPQILSVLLVSPERMSIFNLFRYIQHLRENQQDTQRYDIALWRKL 299 Query: 277 TQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-Y 335 + ++S+ A I L +SF +F I + P Sbjct: 300 LYPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLFNTLFSHIGTLNTWPAPL 359 Query: 336 IPILYLFLFCISSIFLLMIKKKY 358 L ++ +F L ++ Sbjct: 360 TAALPGLIYLALGLFGLKWVDRH 382 >gi|152993423|ref|YP_001359144.1| hypothetical protein SUN_1840 [Sulfurovum sp. NBC37-1] gi|151425284|dbj|BAF72787.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1] Length = 341 Score = 90.4 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 60/363 (16%), Positives = 136/363 (37%), Gaps = 27/363 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + + YI ++FL + I ++ +++ +L + + LL + Y +P + Sbjct: 1 MVNVKGYISSNFTKAFLTIFIPFFLIISLVYLVKISSLTAQIQINFLELLLLYSYSLPNI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P F TN L ++++ EL+ + G +++ +L L IL S+ L + Sbjct: 61 IFYTIPLSFIAAVTNTLMKLSQDNELIALYALGLKAKKVLRSILLLGILFSVLLSTLSFL 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTL-QGIFIVDSR 179 P + K + T + + + D YI + + + + L + I + Sbjct: 121 GIPISKQLYNAFKEKKKTEATLNII-PGKLGQKFGDYYIYVKEKDEKSKLFHDMVIYNRT 179 Query: 180 DTQTHKIYYAQSGSIDLDR--QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + ++ G ++ D+ +++L +G + + + K+KS L+ + Sbjct: 180 KKDAEQFFSSKQGQLNRDKLVASLLLKEGYGYTYTKNK--LQQAKYKS--LEVFDSKQKY 235 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + L+ + + R+ + LF + LI I++ A Sbjct: 236 RFHFQDIVSYWALIKTDKH------------------RMGRALFYLFVSLIPILSVYLVA 277 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + S I F + I +E+ IP L L I ++ +K+ Sbjct: 278 AFAMINPRYQANYSFIIIFSITLSLYLIASSLEKWGD-IPALILTAIVIFIFGRVIFEKR 336 Query: 358 YTK 360 + Sbjct: 337 VAR 339 >gi|301017326|ref|ZP_07182090.1| conserved hypothetical protein [Escherichia coli MS 69-1] gi|300400299|gb|EFJ83837.1| conserved hypothetical protein [Escherichia coli MS 69-1] Length = 359 Score = 90.4 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 58/366 (15%), Positives = 131/366 (35%), Gaps = 26/366 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK--------FKSYTLQTE 231 +A+S SI+ D+ IL+ G H+K K+ F S L+ Sbjct: 181 DLSLESYIFARSASIEDDKT-WILH-GVNHKKWLNGKETLETSDNLAWQSAFTSMNLEEL 238 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S +T ++ + + +L + YR ++L Q + + L+++ Sbjct: 239 SMPGNTFSVRQLNHYIHYL--------QETGQPSSEYRLALWEKLGQPILTLAMILLAVP 290 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-----FLFCI 346 + R + + + + + + +++ P+ L F+ Sbjct: 291 F--TFSAPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVMMA 348 Query: 347 SSIFLL 352 S+ Sbjct: 349 LSLVYW 354 >gi|330751983|emb|CBL80496.1| predicted permease YjgP/YjgQ [uncultured Polaribacter sp.] Length = 363 Score = 90.4 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 67/370 (18%), Positives = 134/370 (36%), Gaps = 20/370 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILL-KISGYLIP 58 MK + YIL+ +FL + L ++ IA I + ++I+ LN +L I Sbjct: 1 MKIIDWYILKRFLVTFLFTLLILIPIAIAIDVSEKIDNFLEHPNLGLNEVLNDYYLNFII 60 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 P + + ++ NTE++ I N S + P A L++I Sbjct: 61 YYTNTFMPLALFIAVILFTSKLSNNTEIIAITNAKVSFTRFMYPYFIGATLITILSLGMN 120 Query: 119 NIIEPKCRSTIKQLSAK-AQLALTFSYLEE-NLFF-RLDDDLYIKISKYNPNNTLQGIFI 175 + + P K K + + L+ + F +L D YI I +N N + F Sbjct: 121 HYVVPNSSKVRKAFEKKYINNSKQKNALKYVSDFSLQLTDSTYIFIRSFNTENNVGNDFN 180 Query: 176 VDSRDT-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK--SYTLQTES 232 ++ + + A S + LN R +D SI Sbjct: 181 SETYNGLELISKLSADRLSYNNKDSIFTLNR-WRKRLVYKDRD-SIFSGSKMDTVFNFAP 238 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + A + + L+ + + L Y E +KR + + I +I++ Sbjct: 239 KDLIYKSAFAQEMPSNELVAFINISKKRGVKNLNAYLVELYKRSSLPIASYILTIIAVAL 298 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI-PILYLF----LFCIS 347 A R+R+ + +++ + + F + ++ + + + Y++ LF + Sbjct: 299 A-----FRKRRGGTGVNLAVGVGIMFLYVFFMKVGEVLGSVAGVNSLAYVWIPNILFGLI 353 Query: 348 SIFLLMIKKK 357 +I+L +K Sbjct: 354 AIYLYFHARK 363 >gi|90021021|ref|YP_526848.1| SecD export membrane protein [Saccharophagus degradans 2-40] gi|89950621|gb|ABD80636.1| permease YjgP/YjgQ [Saccharophagus degradans 2-40] Length = 352 Score = 90.4 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 52/365 (14%), Positives = 123/365 (33%), Gaps = 22/365 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI I + L I+ + + ++ +++ +S + + + IP+ Sbjct: 1 MTKLKRYIGHTIAAAVATVLLVILSLDAISDLVDQLSNLSGD-YTFSEAIIFVLLYIPSS 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 P + L + ++EL+++ G S + L+ V+ + + Sbjct: 60 AYDYLPLSALVGCLIGLGVLASSSELVVMRAAGVSVLQLVWAVMRPVCVFIGVGVLVGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI--FIVDS 178 + P A A+ E ++ R + + Y+ + PN L GI +I D Sbjct: 120 VAPYSDQYADSRRALAKGHDRALQAERGVWNR-EGNEYMHFNAVLPNGKLYGITRYIFDE 178 Query: 179 RDTQ-----THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 + Y + D + DG + + +++ + Sbjct: 179 KGQLLEASFVDSAIYQGEFWFEQDGEVTSFEDGRIEKFGFATREWRT--------EVSPD 230 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + +VL A++ + L + + + Y+ F + Q L +I+I Sbjct: 231 LLNVLVLDADELPMKRLYD-YSTYLDKQGLDSSEYKLAFWHKAFQPLAVASLVMIAISFI 289 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY-LFLFCISSIFLL 352 +RQ +FI + + VF ++ + P+ L + + + Sbjct: 290 LGP--LRQTTMGFRVFIGVIVGL-VFQTSQKMLGPASIIMGFSPMFAVLIPIVVCLVLGV 346 Query: 353 MIKKK 357 + ++ Sbjct: 347 FLIRR 351 >gi|78356992|ref|YP_388441.1| permease [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219397|gb|ABB38746.1| permease, putative [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 359 Score = 90.0 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 52/365 (14%), Positives = 120/365 (32%), Gaps = 18/365 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+LR +++ I + + R++ + L ++L IP + Sbjct: 1 MSILSRYLLRTNLFLTMLTLTIGTGIYLLSDLFDRLDDFLGAGLGLKVILTYFAVKIPLI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P F + L M R+ EL+ + G S + L + + A++ S + Sbjct: 61 ISQILPAVFLLSAVIQLCVMARDRELVALQAGGISFLRLARFFIIYALIWSAVQLGFSQV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSR 179 + ++ + ++ + + I + +P GI + + Sbjct: 121 LGIYGEREASRIWKEQVRNREIDEVQLTNLWFTEHGRIIHLETLHPAAQKGSGITVYELT 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + S D L+ ++ I + +S L E + + Sbjct: 181 PDELSVQRVIRGKSFRADSSGWTLDGCDI----LIPGSYEVATSESIVLPIEQDVKAFSI 236 Query: 240 LKANDQNLSFLLNPNPNNPNYRPE---LLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + E +E R+ +H +L+ V L+++ Sbjct: 237 VDPRGDPSRLPLWQLQDAIARLTESGSNVEALRTAWHMKLSYAFSLVTMALLALALI--- 293 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF----LFCISSIFLL 352 + + SL + F VF+ + + +N P+ + F +S+I L Sbjct: 294 --TWRDSIYINVGTSLLLVF-VFYTLFTVGGSLGENGIVPPLFAAWTANAFFSLSAIARL 350 Query: 353 MIKKK 357 + + Sbjct: 351 IYVSR 355 >gi|53713591|ref|YP_099583.1| hypothetical protein BF2302 [Bacteroides fragilis YCH46] gi|60681871|ref|YP_212015.1| hypothetical protein BF2391 [Bacteroides fragilis NCTC 9343] gi|253565580|ref|ZP_04843035.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|52216456|dbj|BAD49049.1| conserved hypothetical protein [Bacteroides fragilis YCH46] gi|60493305|emb|CAH08089.1| putative membrane protein [Bacteroides fragilis NCTC 9343] gi|251945859|gb|EES86266.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|301163363|emb|CBW22913.1| putative membrane protein [Bacteroides fragilis 638R] Length = 365 Score = 90.0 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 50/369 (13%), Positives = 132/369 (35%), Gaps = 19/369 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 +K +LYI++ +++ + I+ IA V ++++ + + I+ IP Sbjct: 7 IKRLDLYIIKKFLGTYVFAIALIISIAVVFDFNEKMDKFMERSAPWSAIIFDYYMNFIPY 66 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + +TG S +++P + A +++I FI + Sbjct: 67 FANLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMLRPYMISAGIIAISTFILGS 126 Query: 120 IIEPKC---RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + P+ R + K + ++ +D + I Y N F + Sbjct: 127 YVIPRGSVTRLDFEDKYVKKKKTTYVHNIQ----LEIDTGVIAYIDNYQDYNKTGNRFSL 182 Query: 177 DS-RDTQTHKIYYAQSGSIDLDR-QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 D D + A+S + D + D + + + +I++ Sbjct: 183 DKFVDKKLVSHLTARSITYDTTAVNKWTIKDYMIRNLDGLKE--TIVRGDKMDSIIPMEP 240 Query: 235 SSTIVLKANDQNLS--FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + ++++ + L+ L ++ + E+HKR+ I +I + Sbjct: 241 ADFMIMRNQQEMLTSPQLSAYIDKQKQRGIANIKEFEIEYHKRIAMSFASFILTVIGVSL 300 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF-LFCISSIFL 351 + + + + + F + N P++ ++ + ++ Sbjct: 301 ----SSRKTKGGMGLHLGIGLGLSFSYILFQTVASTFAVNGNMPPMIAMWIPNLLYALIA 356 Query: 352 LMIKKKYTK 360 + +K K Sbjct: 357 FYLYRKAPK 365 >gi|254473284|ref|ZP_05086681.1| permease YjgP/YjgQ [Pseudovibrio sp. JE062] gi|211957400|gb|EEA92603.1| permease YjgP/YjgQ [Pseudovibrio sp. JE062] Length = 363 Score = 90.0 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 61/366 (16%), Positives = 124/366 (33%), Gaps = 22/366 (6%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTV 60 ++ LYI + +S L LF + + +L+ + SL + IS +P + Sbjct: 4 RTLSLYISKRFLKSILALFLFAAVLILLFDVLELVRRGGDREGFSLLRIAAISALRVPLL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V PF + +++R+ EL++ G S P L + + I I N Sbjct: 64 LEQVIPFAVLFGSIWAFVTLSRSLELVVARAAGISVWQFTAPALLTGLFIGIASVIGYNP 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF-----FRLDDD-LYIKISKYNPNN-TLQGI 173 + ++ A+ ++ +YL E D + TL G+ Sbjct: 124 GAVYLQQKSDEV-AEGLFSVEQTYLLEGSGEVWLRQNGTDGESVLHARHIGGQGATLNGV 182 Query: 174 FIVD-SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 I R + + A+ + L D V+ + + +Y++ T Sbjct: 183 TIFSFDRQGEFSERIEARRAVLAEG--MWRLTDAVVYALDTDPQ-----HYDNYSVSTFL 235 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLE-TYRSEFHKRLTQWLFPVIFGLISIV 291 + + +++SF P + R L Y ++ L + L ++ +I I Sbjct: 236 TPTEVKESIGSPESISFWSLPRFIELSQRAGLPAYRYSLQYQTLLAKPL--LLVAMIVIA 293 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYI--IHKIEQNPYYIPILYLFLFCISSI 349 AA + R I + F ++ + P + +F + Sbjct: 294 AAVSLRVSRFGGIGRLIIWGIIAGFVLYAVSEISKDLGGAGIVPTAVAAWAPGVFGVLMG 353 Query: 350 FLLMIK 355 F +++ Sbjct: 354 FTILLN 359 >gi|320539288|ref|ZP_08038958.1| putative conserved inner membrane protein [Serratia symbiotica str. Tucson] gi|320030680|gb|EFW12689.1| putative conserved inner membrane protein [Serratia symbiotica str. Tucson] Length = 356 Score = 90.0 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 47/359 (13%), Positives = 118/359 (32%), Gaps = 8/359 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI + I + +M+ +V ++ +I+ + ++ V ++ + +P + Sbjct: 3 GVLDRYIGKTIFNTIIMTLFMLVSLSGIIKFVDQLRRVGQGDYTVLGAGMFTLLSVPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L + +EL+++ +G +R+ + V+ AI L + + Sbjct: 63 EIFFPMAALLGALLGLGQLATRSELVVMQASGFTRMQIAGSVMKTAIPLVLLTMAIGEWV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV---DS 178 P+ A+ + + L+ + +D +I I + + L G+ I D Sbjct: 123 APQGDQMAHDFRAQQMYGGSLLSTKSGLWAKDGND-FIYIERVSGEKELAGVNIYHFNDR 181 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 R + + YA + S + + D + + + + Sbjct: 182 R--RLETVRYAATASFEDGVWKLSQVDTSDLTNEELVTGTQTLT-GEWKTNLTPEKLGVV 238 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 L ++ L N + Y+ ++ L + L+++ Sbjct: 239 ALDPTSLSIKGLHN-YVKYLKQSGQEANRYQLNMWNKIFSPLSVAVMMLMALSFIFGPLR 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P + L + + +++K+K Sbjct: 298 SVPMGIRVVTGISFGFLFYVLDQIFGQLSLVYNMPPVLGALLPSMMFLLISMYMLLKRK 356 >gi|311103830|ref|YP_003976683.1| hypothetical protein AXYL_00610 [Achromobacter xylosoxidans A8] gi|310758519|gb|ADP13968.1| hypothetical protein AXYL_00610 [Achromobacter xylosoxidans A8] Length = 392 Score = 90.0 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 56/371 (15%), Positives = 127/371 (34%), Gaps = 25/371 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M++ Y+ R I RS + + ++ + ++ ++ V S+ LL + IPT Sbjct: 1 MRTARRYLAREIYRSCAVVLMALLGLFTFFALVDDLDNV-GDKFSMMALLYMQALAIPTR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L + + EL+I+ +G S + L++ + + I L I + Sbjct: 60 LYDLLPIGLLIGAILALAGLAQRNELVILRVSGVSGMKLLRMLWIVTIPLMIGAGLLSEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLD----DDLYIKISKYNPNNTLQGIFIV 176 + P + + + L +F+ I I + + + + + Sbjct: 120 VTPWAEIKSGEANLLFRGKAGGDRLNSGYWFKEPTADGGTRIINIGELKGDGQVSAVTLY 179 Query: 177 D-SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKS------------PISKDISIMKF 223 + +D + A +G ++L D R P +++K Sbjct: 180 EFKKDQTLSALSTAPTGLFTQGD--LLLKDVTETRLDDEAAEALANARPPKHPPATVVKL 237 Query: 224 KSYTLQTESANSS--TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLF 281 + T + VL +++ LL+ N + + + ++L Sbjct: 238 PERNIDTTLSAERLLARVLTPERMSIATLLDYVDYLRNNQLQYGRQVVA-LWRKLAYPFT 296 Query: 282 PVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL 341 ++ +I+I A R+ +FI + + G F ++ + + L Sbjct: 297 LLV--MITIAAPIGLMQTRRGGVGAKVFIGILLGVGFFMLNQLALNVGMLGKWPAWLTAL 354 Query: 342 FLFCISSIFLL 352 + I L Sbjct: 355 GPNIGAMIVAL 365 >gi|198283962|ref|YP_002220283.1| permease YjgP/YjgQ family protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667335|ref|YP_002426598.1| YjgP/YjgQ family protein [Acidithiobacillus ferrooxidans ATCC 23270] gi|198248483|gb|ACH84076.1| permease YjgP/YjgQ family protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519548|gb|ACK80134.1| YjgP/YjgQ family protein [Acidithiobacillus ferrooxidans ATCC 23270] Length = 357 Score = 90.0 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 54/364 (14%), Positives = 122/364 (33%), Gaps = 24/364 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + + R + + ++ + ++ QI+ + + S+ LL + +P V Sbjct: 1 MKRADRLLFRGMLLYSSLVLAMLLTLVYIAQIIAKSSGPGHGVWSMTRLLSYAALQLPDV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 V P + ++ ++ ++E++ + +G S L +P+L + +L + +F Sbjct: 61 AYDVIPLALLLGALVWMSILSGHSEVIALRMSGWSVWRLEQPLLLVGLLGAGLMFALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD--DLY-------IKISKYNPNN-TL 170 + P ++A A A+ + E F L+ I++ L Sbjct: 121 VIP--------VTAPAAEAMWANAGEPGAGFHNMGPRGLWLRYGTQIIQVGTVGDGGKIL 172 Query: 171 QGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT 230 Q + I D R + L+D + R +P ++ + + + Sbjct: 173 QNLHIADVRQGMVGINAMTTAAEAVFQGGHWYLHDVRLFRITPDQIQMTAVTETPWPVAL 232 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 A S+ L L + + + F +R++ ++ L+++ Sbjct: 233 HPATLSSFAHPTRTMTLPTL-WQSYQALQSGALNMNRFALAFWRRVSYPWVGLVMILLAV 291 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFS---YIIHKIEQNPYYIPILYLFLFCIS 347 R + L + G + YI P +L + LF Sbjct: 292 PFV--TRNPRGGGLAARVMAGLVLGLGFHFLTEMSGYISVSGGIPPLAATLLPIALFAAV 349 Query: 348 SIFL 351 + L Sbjct: 350 AGAL 353 >gi|110643218|ref|YP_670948.1| putative permease [Escherichia coli 536] gi|47155053|emb|CAE85252.1| putative permease [Escherichia coli] gi|110344810|gb|ABG71047.1| putative permease [Escherichia coli 536] Length = 359 Score = 90.0 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 59/369 (15%), Positives = 133/369 (36%), Gaps = 21/369 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSHYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK--------FKSYTLQTE 231 +A+S SI+ D+ IL+ G H+K K+ F S L+ Sbjct: 181 DLSLESYIFARSASIEDDKT-WILH-GVNHKKWLNGKETLETSDNLAWQSAFTSMDLEEL 238 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S +T ++ + + +L + YR ++L Q + + L+++ Sbjct: 239 SMPGNTFSVRQLNHYIHYL--------QETGQPSSDYRLALWEKLGQPILTLAMILLAVP 290 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + R + + + + + + +++ P+ L L + Sbjct: 291 F--TFSAPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLMA 348 Query: 352 LMIKKKYTK 360 L + Y + Sbjct: 349 LSLVYWYDR 357 >gi|290473525|ref|YP_003466395.1| putative transmembrane protein, transport [Xenorhabdus bovienii SS-2004] gi|289172828|emb|CBJ79599.1| putative transmembrane protein, transport [Xenorhabdus bovienii SS-2004] Length = 358 Score = 89.6 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 46/334 (13%), Positives = 127/334 (38%), Gaps = 26/334 (7%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI R I ++ LM+ +V ++ +I+ + ++ V S + +P + Sbjct: 3 GVLDRYIGRTILQTILMTLFTLVSLSGIIKFVDQLRKVGQGEYSAFAAGIYTLLSVPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ +EL+++ +G +R+ + V+ AI L + + Sbjct: 63 QIFFPMAALLGGLLGLGALATRSELVVMQASGFTRLQVAGSVMKTAIPLVFLTMVIGEWV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + ++ + + ++ + +D ++ I + +N L+ + I D Sbjct: 123 APQGEQIARNYRSQKMFGGSLMSTAKGMWAKDGND-FVYIKSVDKDNALRDVSIYHFDDN 181 Query: 182 QTHKIY-YAQSGSIDLDRQAIIL---NDGEVHRKSPISKDISI-MKFKSY----TLQTES 232 + YA + D + + L + ++ + I+ I ++KS L + Sbjct: 182 KKLLSVKYAATAVYDQNNRQWKLSQVEESDLRQIGRITGSQRISAEWKSLLTPEKLGVVA 241 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + + ++ Q +++L + Y+ K++ L + L+++ Sbjct: 242 LDPDALSIRGLQQYITYLKQ--------GQQDAGRYQLNMWKKVFAPLSVAVMMLMALSF 293 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYII 326 + + + + + G+ GF + + Sbjct: 294 IFGP--------LRSVAMGVRVIAGISTGFIFYV 319 >gi|89900898|ref|YP_523369.1| permease YjgP/YjgQ [Rhodoferax ferrireducens T118] gi|89345635|gb|ABD69838.1| permease YjgP/YjgQ [Rhodoferax ferrireducens T118] Length = 368 Score = 89.6 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 60/376 (15%), Positives = 138/376 (36%), Gaps = 27/376 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLV---SSSTESLNILLKISGYLI 57 MK+ I + + L + + + ++ I V S + L L +I Sbjct: 1 MKTLRRLIYGEVLYAVAFVTLGFLSLFFFFDFVEEIQAVGRYSEAGYRLVHALTFVALMI 60 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 P+ L + P + T V+ + +++E I+ +G +K +L L + + F Sbjct: 61 PSHLYELLPIAVLIGTIFVMARLAQSSEFTILRTSGLGPWRALKALLLLGLGFVVLTFAI 120 Query: 118 ENIIEPKCRSTIKQLSAKAQLALTF----SYLEENLFFRLDDDLYIKISKYNPNNTLQGI 173 + I P + L A+ Q ++T ++L+E + + + +S P+ +++G+ Sbjct: 121 GDYISPPADRAGQLLKARYQGSITVGQTGAWLKE---QQTNAQYAVNVSAMAPDGSMRGV 177 Query: 174 FIVDSRDTQTH-KIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIM------KFKSY 226 + + + A+S D A L+ P D + + F + Sbjct: 178 RVFEFDNQGFLMSTLQAESAQFGADD-AWNLSRVSRTEFPPRDADTARIDRAQLDSF-RW 235 Query: 227 TLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFG 286 Q + + +LK + L + ++ + Y EF K++ L ++ Sbjct: 236 PNQISAEMVAAALLKPERMSTIDLF-QYIQHLRANSQVAQRYEIEFWKKVFYPLSCLVMV 294 Query: 287 LISIVAADKRALVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFL 343 ++++ A R +F + F F Y+ + P+ L + Sbjct: 295 VLALPFA--YLHFRSGGIATYVFGGVMAGISFFLLNNVFGYMGNLQNWQPWLTAALPGMI 352 Query: 344 FCISSI--FLLMIKKK 357 + + S+ F ++ ++ Sbjct: 353 YLVLSLTAFGWLVLRR 368 >gi|300870020|ref|YP_003784891.1| putative permease [Brachyspira pilosicoli 95/1000] gi|300687719|gb|ADK30390.1| putative permease, YjgP/YjgQ family [Brachyspira pilosicoli 95/1000] Length = 356 Score = 89.6 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 55/365 (15%), Positives = 132/365 (36%), Gaps = 16/365 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+L+ F+ S + V + + + +++ + E++ + P Sbjct: 1 MKKLNSYLLKEFLSMFVGSLILFVILVTIADLSSKLSYYTEHPENMKYFITYHAARTPHN 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKP--VLFLAILLSIFLFISE 118 L + P +T VL + +N E+L + N+G S P ++ +A+ L + F + Sbjct: 61 LYYLFPIALMFSSTYVLGTFVKNKEMLAVQNSGISLFKFSSPIFIIVIALCLGLIGFW-Q 119 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQG-IFIV 176 + P + + + N+F ++ I +N +N L + + Sbjct: 120 FVAAPMNKISFEANDLGRGHKKGEYTGSLNIF--GANNYIYFIENFNFNDNYLTNTVIVK 177 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 D + S + + + G + + K+IS+ + +Y L Sbjct: 178 LKEDGAIDMRISSPSVRWNDNEKKWYAETGILAEFT-DKKNISVKEITNYPLDVLERPEH 236 Query: 237 TIVLKAND-QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + A D +L+ ++ T ++FH R++ + +I ++A+ Sbjct: 237 FMNRPALDSMSLTEEMH-WIKLRKEVNLNTNTLETDFHYRIS---YCFSGFIIVLLASLF 292 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--FCISSIFLLM 353 Q + + + + ++ V++ + + P + ++ + + L Sbjct: 293 SKFSTQSVLVVSLVMVIMVAL-VYYSILMMFRSMGDGGNMNPFIAAWMPNIIFAGLCFLA 351 Query: 354 IKKKY 358 KK Y Sbjct: 352 FKKFY 356 >gi|153820564|ref|ZP_01973231.1| conserved permease [Vibrio cholerae NCTC 8457] gi|126508893|gb|EAZ71487.1| conserved permease [Vibrio cholerae NCTC 8457] Length = 236 Score = 89.6 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 36/218 (16%), Positives = 87/218 (39%), Gaps = 2/218 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I + + + V ++ +I+ ++++ V + L L IP + Sbjct: 3 KILDWYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGEGSYDLLQALLFVVLSIPRDV 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L ++ ++EL+++ G S++ + VL AI L I + + Sbjct: 63 EMFFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIIVTLLGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + + A A + ++ R +D +I I+K + + Sbjct: 123 APQAQKMARDMRAFATSGGAIMSVRTGVWARDAND-FIFIAKVENEHLYGLNLWRFDENK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDIS 219 + + +++ + + ++ D + R S+ + Sbjct: 182 KLSTVIFSEQVDYVANNE-WLMKDAVLTRLVMTSRSVK 218 >gi|114704780|ref|ZP_01437688.1| hypothetical protein FP2506_07586 [Fulvimarina pelagi HTCC2506] gi|114539565|gb|EAU42685.1| hypothetical protein FP2506_07586 [Fulvimarina pelagi HTCC2506] Length = 360 Score = 89.6 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 46/359 (12%), Positives = 114/359 (31%), Gaps = 21/359 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y R +F + + + + +I +++ + +SL +LL S +P + Sbjct: 5 TLNRYFFRLYLVNFFSTVVAVSALVLLIDLVELGRRSVLADQSLGVLLLFSALRVPAFME 64 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 PF + L S+NR EL++ G S ++ P + ++ L + + N + Sbjct: 65 QAFPFIILFSSIFTLISLNRRLELVVARAAGVSAWQILMPFIAGSLFLGLLATFAYNPLS 124 Query: 123 PKCRSTIKQLSAKAQ-LALTFSYLEENLFFRLDDDL--YIKISKYNPNNT-LQGI--FIV 176 ++ + + A+ + S L+ + D + + ++ N L + F++ Sbjct: 125 AYTKAQAANIESAAEGREVASSALQTPWLRQNADGVRSIMGATQVAENGRVLSNVSAFVM 184 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + D A + ++ R + I + Sbjct: 185 -ADDGSVETRIDAPRAELGNQEWILL-----RPRVTRIGYTPRDLVEYRLPTSLRPEYIE 238 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + ++ L + + ++H + Q V L++ A Sbjct: 239 QRLADPETISIWEL-GSKIDVAASLGFNSMAFSMQYHTLIAQPALFVAMTLLA--ATVAT 295 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN------PYYIPILYLFLFCISSI 349 R + + F ++ + + P+L LF ++ + Sbjct: 296 RFSRTGQPGRIFVGGVLAGFVLYVVTFLAKALGSNDVVPPIVAAWFPVLAAGLFGVTIL 354 >gi|300900316|ref|ZP_07118495.1| conserved hypothetical protein [Escherichia coli MS 198-1] gi|300356206|gb|EFJ72076.1| conserved hypothetical protein [Escherichia coli MS 198-1] Length = 315 Score = 89.6 bits (221), Expect = 7e-16, Method: Composition-based stats. Identities = 53/324 (16%), Positives = 117/324 (36%), Gaps = 19/324 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD--------ISIMKFKSYTLQTE 231 YA+S +I+ D+ IL+ G H+K K+ F S L+ Sbjct: 181 DLSLESYIYARSATIEDDKT-WILH-GVNHKKWLNGKETLETLDNLAWQSAFTSMNLEEL 238 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S +T ++ + + +L + YR ++L Q + + L+++ Sbjct: 239 SMPGNTFSVRQLNHYIHYL--------QETGQPSSEYRLALWEKLGQPILTLAMILLAVP 290 Query: 292 AADKRALVRQRKKIHPIFISLSIS 315 + + + + Sbjct: 291 FTFSAPRSPGMGSRLAVGVIVGLL 314 >gi|291296717|ref|YP_003508115.1| permease YjgP/YjgQ family protein [Meiothermus ruber DSM 1279] gi|290471676|gb|ADD29095.1| permease YjgP/YjgQ family protein [Meiothermus ruber DSM 1279] Length = 338 Score = 89.6 bits (221), Expect = 7e-16, Method: Composition-based stats. Identities = 51/356 (14%), Positives = 110/356 (30%), Gaps = 33/356 (9%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 Y+LR +L+ L V + + + + ++++ Y +P L + Sbjct: 2 LPRYLLRETLSLYLLGVLLFVGLITFDLLSSLSGAFLRARTPVGEIVQMVAYRVPHTLGI 61 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P L R +EL G I PVL LA+ + + ++E ++P Sbjct: 62 ALPLGLVFALLVALARWIRQSELKAAYAAGIPPRVFIGPVLLLALAVGAVVLLNEGWLKP 121 Query: 124 KCRSTIKQLSAKAQL-ALTFSYLEENLFFRLDDDLYIKISKYNP------NNTLQGIFIV 176 + + L K + L E + +Y + P + L+G+ +V Sbjct: 122 IAQERFEALQYKIYYGSEPSGVLTERTYTPQGLGIY-YAQRIYPPPEGQTGSRLEGVRVV 180 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 +S ++ A+ G + +R P + + E Sbjct: 181 ES----GGSVWSAERGVWVSGAWRLQ----NAYRVDPSGQIFQ---------EAEHPLPF 223 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + ++ + L P + + + +R + V+ ++IV Sbjct: 224 PVGVQPKAVSYEALRMPELHAVASADPAAQFPLA---RRYANAVGTVVLAWLAIVIGLS- 279 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 R+ + + FG + F+ + +L + LL Sbjct: 280 ----LRESAWAFIAVVGLIFGYWTLFTLSAQFARFDLLGAYGAWLPNIVYGGLALL 331 >gi|282892298|ref|ZP_06300694.1| hypothetical protein pah_c221o032 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281497889|gb|EFB40240.1| hypothetical protein pah_c221o032 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 361 Score = 89.6 bits (221), Expect = 7e-16, Method: Composition-based stats. Identities = 57/336 (16%), Positives = 122/336 (36%), Gaps = 24/336 (7%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 +E Y R + + F + + +I S+ + + + Y + L Sbjct: 9 SIWERYFFREVVKLFCVFIGSFYGLYVLIDFSSHTTQFSTHFQ-WSEIFSYYFYELIRRL 67 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 ++ PF + T L S++ N EL+ + +G S +L++P + + + ++ ++ + + Sbjct: 68 DVILPFALMLATIKTLCSLSTNNELVALMASGMSLKSLLRPFIIIGLFFTVLMYGNAEFL 127 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFR---LDDDLYIKISKYNPNNTLQGIFIVDS 178 PK + +KQ+ + + LE F + LDD I Y+ F DS Sbjct: 128 LPKAQKGLKQIHD--RHTSLKNKLENRGFVQHIILDDQTQILFQYYDEERQ----FFFDS 181 Query: 179 R-----DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 D Y + L R L ++ + + S ++ + + Sbjct: 182 YWIKSADDIFRIKYLFPHLEVPLGRYVHHL---TRNQNDELVESASFVEKEFPQIYFNQK 238 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + +Q+L+ L+ P+N E S F+ ++ + F +I+ Sbjct: 239 KLQETLSLPEEQSLTDLVQQLPHNNRISHEKEAQVVSHFYHKMALPWLCL-FAVIA---- 293 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI 329 VR + + P+F+ + S F + Sbjct: 294 PAPFCVRFSRGL-PVFMIYACSIFGLITFYLTMDAA 328 >gi|34540317|ref|NP_904796.1| hypothetical protein PG0501 [Porphyromonas gingivalis W83] gi|34396629|gb|AAQ65695.1| conserved hypothetical protein [Porphyromonas gingivalis W83] Length = 360 Score = 89.6 bits (221), Expect = 7e-16, Method: Composition-based stats. Identities = 53/360 (14%), Positives = 123/360 (34%), Gaps = 10/360 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 + + Y+++ +F+ S + I+ ++ V I ++I+ SL +I+ +P Sbjct: 4 LNRLDKYLIKQFLGTFVFSIILIISVSVVFDINEKIDDFMKPEVSLRSIIFDYYFNFVPY 63 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + +E++ + + G S L+ P + A +++I F+ + Sbjct: 64 YANLFSPLFVFISVIFFTSKLAEKSEIIAMLSAGVSFKRLMVPYMLSATVIAILTFLLNS 123 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF-IVDS 178 + P +T K Y E++ + ++ Y+ F + + Sbjct: 124 FVIPPGNATRIDFQNKYIKNKKVQY-AESVQLEVKKGVFAFFGSYSDAMRTGYQFSLEEF 182 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + Q A D + + + + + + A+ Sbjct: 183 KGKQLVSRLTADRIQYDSLYN-WRIFNYRIRHFGKYKETVESGSEMDTVIAVRPADFLVA 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + L + ++ + E HKR I +I A+ Sbjct: 242 EDDVETMTTTDLHTYISHQKQRGVGNVKLFEIELHKRYAAIFSAFILTIIG--ASLSSRK 299 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMIKK 356 V+ I+ I I L +SF + F + + P + +L F + I + + KK Sbjct: 300 VKGGMGIN-IAIGLGLSFA-YILFMTVAGTFAISGSLPPFMAAWLPNFVFTVIAVSLYKK 357 >gi|114319721|ref|YP_741404.1| permease YjgP/YjgQ family protein [Alkalilimnicola ehrlichii MLHE-1] gi|114226115|gb|ABI55914.1| permease YjgP/YjgQ family protein [Alkalilimnicola ehrlichii MLHE-1] Length = 360 Score = 89.6 bits (221), Expect = 7e-16, Method: Composition-based stats. Identities = 52/361 (14%), Positives = 124/361 (34%), Gaps = 7/361 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 ++ + Y++ + S L++ + I+ + V + + ++ L P+ Sbjct: 2 IRLLDRYLIITVVASALVALVVIMSLDLVFSFVDEGGDIGTADYGPLSALAYVLLSSPSR 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 PF + L ++ EL ++ G S + + + V ++L++ Sbjct: 62 AYEAFPFATLIGALMGLGALAARNELTVMRAAGVSVLQIARAVAAGGLVLALIAMAMGEW 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV--DS 178 + P +L A A L+ R D +I++ + L+G+ I + Sbjct: 122 VVPPAERAATELRASAMARDVGISGAGGLWAR-DGGQFIEVRRARSPAHLEGLTIYHFEE 180 Query: 179 RD--TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 RD T + + S ++ D + I+ GEVH + + K + A Sbjct: 181 RDGEPMTLRRVLSGSEALFRDGRWILREPGEVHLHADGISVADLGDEKVWESALSPAVLD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 +V+ +++ L +R F ++ + + L++I Sbjct: 241 VVVVDPESLSMADL-RTYIGYLEANELDSGEWRLAFWVKVATPISTLAMLLLTIPLVFGA 299 Query: 297 ALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + I + + ++F + ++ P +L F F + I ++ Sbjct: 300 VRSTGAGQRIFIGVLIGVAFFLVNRMLNHAGVVFGLPPSASALLPAFAFLAAGILGILKV 359 Query: 356 K 356 + Sbjct: 360 R 360 >gi|301643655|ref|ZP_07243696.1| conserved hypothetical protein [Escherichia coli MS 146-1] gi|301078039|gb|EFK92845.1| conserved hypothetical protein [Escherichia coli MS 146-1] Length = 349 Score = 89.6 bits (221), Expect = 7e-16, Method: Composition-based stats. Identities = 57/361 (15%), Positives = 129/361 (35%), Gaps = 21/361 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I + G S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSMGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD--------ISIMKFKSYTLQTE 231 YA+S +I+ D+ IL+ G H+K K+ F S L+ Sbjct: 181 DLSLESYIYARSATIEDDKT-WILH-GVNHKKWLNGKETLETLDNLAWQSAFTSMDLEEL 238 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S +T ++ + + +L + YR ++L Q + + L+++ Sbjct: 239 SMPGNTFSVRQLNHYIHYL--------QETGQPSSEYRLALWEKLGQPILTLAMILLAVP 290 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + R + + + + + + +++ P+ L L + Sbjct: 291 F--TFSAPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPIAFVLVA 348 Query: 352 L 352 L Sbjct: 349 L 349 >gi|299065987|emb|CBJ37168.1| putative permease, predicted YjgP/YjgQ family [Ralstonia solanacearum CMR15] Length = 401 Score = 89.2 bits (220), Expect = 8e-16, Method: Composition-based stats. Identities = 50/284 (17%), Positives = 94/284 (33%), Gaps = 29/284 (10%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I F+ ++ + +L + V +L + PT Sbjct: 7 MQVYEKYFARQIYGVFVFILFAVLALFVFFDMLSELGSVVGRYTTLIAFFHVM-LQAPTR 65 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + V + M +E I G + + +A+ L++ +I Sbjct: 66 VYEVIPVAALISAIYVFSQMASQSEFTIFRVAGLDTRRALLSLFKIALPLALVTYIFGEF 125 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRL-----DDD------LYIKISKYNPNNT 169 I PK +++ +A A S ++ + D ++ + P+ T Sbjct: 126 IGPKSEQFAQKVRLEALGATVSSGFRSGVWVKDRGPARPDGSGGEVTRFVNVGTLQPDQT 185 Query: 170 LQGIFIVD-SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 +QG+ I + D + I AQ G H + + ++F + Sbjct: 186 IQGLRIYEFDTDYRLSSIRVAQQARY----------QGHQHWELNDVTETRFIEFPRHAG 235 Query: 229 QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEF 272 +S V A D L P+ R + RSE Sbjct: 236 GATPQDSKQAVPGAPD-----ALAPDFRGEQTRL-PKQDMRSEL 273 >gi|325282782|ref|YP_004255323.1| permease YjgP/YjgQ family protein [Deinococcus proteolyticus MRP] gi|324314591|gb|ADY25706.1| permease YjgP/YjgQ family protein [Deinococcus proteolyticus MRP] Length = 402 Score = 89.2 bits (220), Expect = 8e-16, Method: Composition-based stats. Identities = 34/200 (17%), Positives = 67/200 (33%), Gaps = 6/200 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YIL + L L + + + ++ + GY +P Sbjct: 1 MSRINRYILSELIPPLLAGVLLFTALLSFGYFFVSSQWL--QGVAPGLVAQWIGYQVPDT 58 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V P + T +N EL+ + + G +PV + +LL++ Sbjct: 59 LVKVLPMAAVLMTIVAFGRLNTERELVALQSGGIGLGQAGRPVALIGLLLALLSLWLSLW 118 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIV--D 177 + PK + L S + L L + + Y+P LQ + Sbjct: 119 VAPKANVETRSLYWDVMTGSGLSSM-AGRTLDLGGGLNVYWAGYDPATRKLQNVRAERWS 177 Query: 178 SRDTQTHKIYYAQSGSIDLD 197 D + ++ +A+ G+ + + Sbjct: 178 KDDPKRVELVFAREGTFEDN 197 >gi|170729351|ref|YP_001774784.1| hypothetical protein Xfasm12_0115 [Xylella fastidiosa M12] gi|167964144|gb|ACA11154.1| conserved hypothetical protein [Xylella fastidiosa M12] Length = 361 Score = 89.2 bits (220), Expect = 9e-16, Method: Composition-based stats. Identities = 40/281 (14%), Positives = 102/281 (36%), Gaps = 17/281 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L +SF+ + + ++ + ++ + ++ +LL G + Sbjct: 1 MPKLDRYLLSDFTQSFIATLIVLMLVGVGGVLVDILGSIADGHFPAKLLLSQLGLRFISY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP++ P + L + R++E+ +I + G ++ +L L + + + + + Sbjct: 61 LPLLLPLALMLGLLLSLGRLYRDSEMAVITSIGVGPGRMLPSILGLVLPVVVLIGVCSLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSR 179 + P T L +A ++ + LE F + D + +S + + T L +F+ + Sbjct: 121 LAPWANRTANDLLEQANRSIIMAGLEAGTFTPMPDGGVVYLSSLSSDGTKLNAVFMQSQK 180 Query: 180 DTQTHKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISK--DISIMKFKSYTLQTESAN 234 D + A+ G + + + L DG+ + ++ F + Sbjct: 181 D-DRIAVVTAKRGEMYVQGDKGRYLRLEDGQRVDGPADGAALNYRVLTFARNDALLPELS 239 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKR 275 + L+ + +++ H R Sbjct: 240 VVYDSNHPDILPTFNLI----------GDPRREAQAQLHAR 270 >gi|293406596|ref|ZP_06650522.1| predicted protein [Escherichia coli FVEC1412] gi|298382335|ref|ZP_06991932.1| predicted protein [Escherichia coli FVEC1302] gi|291426602|gb|EFE99634.1| predicted protein [Escherichia coli FVEC1412] gi|298277475|gb|EFI18991.1| predicted protein [Escherichia coli FVEC1302] Length = 342 Score = 89.2 bits (220), Expect = 9e-16, Method: Composition-based stats. Identities = 53/324 (16%), Positives = 117/324 (36%), Gaps = 19/324 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 28 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 87 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 88 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 147 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 148 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 207 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD--------ISIMKFKSYTLQTE 231 YA+S +I+ D+ IL+ G H+K K+ F S L+ Sbjct: 208 DLSLESYIYARSATIEDDKT-WILH-GVNHKKWLNGKETLETLDNLAWQSAFTSMNLEEL 265 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S +T ++ + + +L + YR ++L Q + + L+++ Sbjct: 266 SMPGNTFSVRQLNHYIHYL--------QETGQPSSEYRLALWEKLGQPILTLAMILLAVP 317 Query: 292 AADKRALVRQRKKIHPIFISLSIS 315 + + + + Sbjct: 318 FTFSAPRSPGMGSRLAVGVIVGLL 341 >gi|297171530|gb|ADI22528.1| predicted permeases [uncultured Oceanospirillales bacterium HF0500_09M11] gi|297182284|gb|ADI18453.1| predicted permeases [uncultured Oceanospirillales bacterium HF4000_13G19] Length = 353 Score = 89.2 bits (220), Expect = 9e-16, Method: Composition-based stats. Identities = 58/359 (16%), Positives = 115/359 (32%), Gaps = 9/359 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y R + L IV + + + + + + + L+ +P Sbjct: 1 MTLLKRYFWRSVLLPSLAIVAIIVGLDCLFSFIYELEFLRGGYQVMQA-LQFVLTTVPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 P + T L M + EL +I G S + + VL I L + Sbjct: 60 FHEYLPMAILLGTLIGLGLMANSGELSVIRAAGVSTLQVSWMVLRPVIFLMLLSIPVGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF-IVDSR 179 + P + Q + Q + E F+ + D +I I+ PN L G+ + Sbjct: 120 LAPYT-EQVAQSNRSLQEGGGEALRSEYGFWHREGDEFIHINTVQPNGVLYGLTRYRFND 178 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 D Q + + + D + G R + + S +V Sbjct: 179 DHQLEESQFVERALYQGDHWTLQNIQGT--RFGDDRTETYTEGGGRWDTSLTPQLLSIVV 236 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADKRA 297 L+ ++ L N + + + F ++L + LI+ + R Sbjct: 237 LEPRRLAMAKLWNYTRYMKEQGLQSADYMLA-FWQKLLMPAATIGMVLIAISFIFGPLRE 295 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + I L+ ++G + F ++ P L L + I+LL+ + Sbjct: 296 VTMGLRMAAGIVAGLTFNYGQQF-FGHLSLVFRTEPLLAAGLPPLLCLVLGIWLLLRVR 353 >gi|126736392|ref|ZP_01752134.1| putative permease [Roseobacter sp. CCS2] gi|126714213|gb|EBA11082.1| putative permease [Roseobacter sp. CCS2] Length = 364 Score = 89.2 bits (220), Expect = 9e-16, Method: Composition-based stats. Identities = 54/364 (14%), Positives = 115/364 (31%), Gaps = 19/364 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y RSFL + I + ++ ++ S + LL +S IP Sbjct: 2 ILHRYFASRFLRSFLGVGMVFFLIMLFVDLVDQLRRFGSKDATFVDLLMLSLLNIPQAFY 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + T + S++R++E+++ G S + + L +A+L+ IF N I Sbjct: 62 AILPLIMILATIALFLSLSRSSEMVVTRAAGRSALHSLLAPLTVALLVGIFAVGVMNPIV 121 Query: 123 PKCRSTIKQLSAKAQLALTF-------SYLEENLFFRLDDDLYIKISKYNPNNT-LQGI- 173 + S + + +L + I+ N + T L + Sbjct: 122 AGTSKEFEARSDALRGDSSVLSFGSSGLWLRQG---NATGQTVIRAQSANLDGTLLTDVT 178 Query: 174 FIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDG-EVHRKSPISKDIS-IMKFKSYTLQTE 231 F+ + D A S + A +L D + + S + + T Sbjct: 179 FLTFAPDGNPITRISAASAELTTG--AWVLRDAKSWQLAGVTTPEASAQLDAERTVQSTL 236 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 + + + L + + + FH L +F V LI Sbjct: 237 TPDQIRDSFGTPSSIPIWELPAFIDRLQTAGFSAQRHLVWFHTELALPIFLVSMVLIGAS 296 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIF 350 R + + ++ ++F ++ ++ E + + + F I Sbjct: 297 FTL--RHQRGGRTGMMVMFAVLLAFVTYFIRNFAQVLGENGQLPVLLAAWAPPFAAIGIS 354 Query: 351 LLMI 354 + + Sbjct: 355 MGFL 358 >gi|94985285|ref|YP_604649.1| permease YjgP/YjgQ [Deinococcus geothermalis DSM 11300] gi|94555566|gb|ABF45480.1| permease YjgP/YjgQ [Deinococcus geothermalis DSM 11300] Length = 381 Score = 89.2 bits (220), Expect = 1e-15, Method: Composition-based stats. Identities = 34/204 (16%), Positives = 70/204 (34%), Gaps = 6/204 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+ R + + L I + + ++ + GY +P Sbjct: 1 MTRLTRYVTRELLPPLVAGTLLFTAILSFGYFFISSQWL--RGVPVGLIGQWIGYQLPDT 58 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V P + T + EL+ + + G + +PV +A L++ Sbjct: 59 LVKVLPMAVVLMTVVAFGRLATERELVAVQSGGIGLGQVARPVAVVAALVTALAVWLSLW 118 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVD-- 177 + P+ + L S + L D+L + + Y+ LQ + + Sbjct: 119 VAPRANVETRGLYWDVLTGAGLSQVV-GKTVDLGDNLTLWLGGYDAAGRKLQNVRVERWA 177 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAI 201 D Q + +A SG+ + +R ++ Sbjct: 178 KDDPQRTTVIFADSGTFENNRLSL 201 >gi|24114287|ref|NP_708797.1| hypothetical protein SF3026 [Shigella flexneri 2a str. 301] gi|30064334|ref|NP_838505.1| hypothetical protein S3227 [Shigella flexneri 2a str. 2457T] gi|24053443|gb|AAN44504.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|30042591|gb|AAP18315.1| hypothetical protein S3227 [Shigella flexneri 2a str. 2457T] gi|281602370|gb|ADA75354.1| putative permease, YjgP/YjgQ family [Shigella flexneri 2002017] gi|313648097|gb|EFS12543.1| hypothetical protein SF2457T_3697 [Shigella flexneri 2a str. 2457T] gi|332752655|gb|EGJ83040.1| hypothetical protein SFK671_3613 [Shigella flexneri K-671] gi|332754439|gb|EGJ84805.1| hypothetical protein SF274771_3586 [Shigella flexneri 2747-71] gi|332765461|gb|EGJ95679.1| hypothetical protein SF293071_3543 [Shigella flexneri 2930-71] gi|333014735|gb|EGK34080.1| hypothetical protein SFK304_3819 [Shigella flexneri K-304] Length = 359 Score = 89.2 bits (220), Expect = 1e-15, Method: Composition-based stats. Identities = 56/366 (15%), Positives = 130/366 (35%), Gaps = 26/366 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDGVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD--------ISIMKFKSYTLQTE 231 YA+S +I+ D+ +L+ G H+K K+ F S L+ Sbjct: 181 DLSLESYIYARSATIEDDKT-WVLH-GVNHKKWLNGKETLETLDNLAWQSAFTSMNLEEL 238 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S +T ++ + + +L + Y ++L Q + + L+++ Sbjct: 239 SMPGNTFSVRQLNHYIHYL--------QETGQPSSEYHLALWEKLGQPILTLAMILLAVP 290 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-----FLFCI 346 + R + + + + + + +++ P+ L F+ Sbjct: 291 F--TFSAPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVA 348 Query: 347 SSIFLL 352 S+ Sbjct: 349 LSLVYW 354 >gi|297565136|ref|YP_003684108.1| permease YjgP/YjgQ family protein [Meiothermus silvanus DSM 9946] gi|296849585|gb|ADH62600.1| permease YjgP/YjgQ family protein [Meiothermus silvanus DSM 9946] Length = 346 Score = 88.9 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 50/361 (13%), Positives = 125/361 (34%), Gaps = 19/361 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+ R +G + L IV + + + + ++ + + +P Sbjct: 1 MSPLDRYLWREVGAAVLGGLAVIVLAFIGGYLYEVLAPLLQRGADPWVVAQYLAFRVPDA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P VL+ M +EL G S + ++ P+L LA +L I + Sbjct: 61 LVRGLPIAMLFALLLVLSRMGEESELKAFLAGGISPLRVLFPLLLLAAVLFISGVLIGES 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I PK + + L +A + L F + + + + + G+ ++ + + Sbjct: 121 IAPKATQSGQSLLRQAVFQKPRALLAPGSTFTDAYGRILYVGQADEGG-IGGVRVITAEE 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 I ++ + + ++L G + ++ +F+ T+ + Sbjct: 180 -----ILLSERAHFEGGQ--LVLEGGSRVTYAGSRPR-TVARFERGTVPLVEL-AQDAPG 230 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + L+ L + + Y +E +W P ++ A + Sbjct: 231 GLSALTLAELHSRIRQY----RQSGLPYHAELTAYYRKWAEPAAAFAFTVFAVGLSFFLL 286 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF----LFCISSIFLLMIKK 356 + + + ++F + +S + + + P+L + L+ ++ LL + + Sbjct: 287 GGSRNLGMVGVVVLTFFYYATWS-VGRIMGEAGALPPLLAAWGPGTLYAVAGAVLLGVGR 345 Query: 357 K 357 + Sbjct: 346 R 346 >gi|193062018|ref|ZP_03043114.1| putative permease, YjgP/YjgQ family [Escherichia coli E22] gi|300824069|ref|ZP_07104190.1| conserved hypothetical protein [Escherichia coli MS 119-7] gi|331669796|ref|ZP_08370641.1| putative permease [Escherichia coli TA271] gi|192932238|gb|EDV84836.1| putative permease, YjgP/YjgQ family [Escherichia coli E22] gi|300523459|gb|EFK44528.1| conserved hypothetical protein [Escherichia coli MS 119-7] gi|331062709|gb|EGI34623.1| putative permease [Escherichia coli TA271] Length = 359 Score = 88.9 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 56/369 (15%), Positives = 132/369 (35%), Gaps = 21/369 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIM--------KFKSYTLQTE 231 YA+S +I+ D+ IL+ G H+K K+ + F S L+ Sbjct: 181 DLSLESYIYARSATIEDDKT-WILH-GVNHKKWLNGKETLEILDNLAWQSTFTSMNLEEL 238 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S ++ ++ + +++L + YR ++L + + L+++ Sbjct: 239 SMPGNSFSVRQLNHYINYL--------QETGQPSSEYRLALWEKLGHPILTLAMILLAVP 290 Query: 292 AADK--RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 R+ + + + L + + P L + + I Sbjct: 291 FTFSAPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVAALGLPMAFVLAALI 350 Query: 350 FLLMIKKKY 358 + + +++ Sbjct: 351 LVYLFDRQH 359 >gi|331679053|ref|ZP_08379725.1| putative permease [Escherichia coli H591] gi|331073118|gb|EGI44441.1| putative permease [Escherichia coli H591] Length = 386 Score = 88.9 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 56/369 (15%), Positives = 132/369 (35%), Gaps = 21/369 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 28 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 87 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 88 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 147 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 148 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 207 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIM--------KFKSYTLQTE 231 YA+S +I+ D+ IL+ G H+K K+ + F S L+ Sbjct: 208 DLSLESYIYARSATIEDDKT-WILH-GVNHKKWLNGKETLEILDNLAWQSTFTSMNLEEL 265 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S ++ ++ + +++L + YR ++L + + L+++ Sbjct: 266 SMPGNSFSVRQLNHYINYL--------QETGQPSSEYRLALWEKLGHPILTLAMILLAVP 317 Query: 292 AADK--RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 R+ + + + L + + P L + + I Sbjct: 318 FTFSAPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVAALGLPMAFVLAALI 377 Query: 350 FLLMIKKKY 358 + + +++ Sbjct: 378 LVYLFDRQH 386 >gi|146328919|ref|YP_001210037.1| hypothetical protein DNO_1153 [Dichelobacter nodosus VCS1703A] gi|146232389|gb|ABQ13367.1| conserved hypothetical membrane protein [Dichelobacter nodosus VCS1703A] Length = 349 Score = 88.9 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 122/358 (34%), Gaps = 15/358 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + ++ +I R I ++ +F++ I +++Q + + + ++L I +P Sbjct: 2 ITLYDRHIARIITAHIIIVLIFLLGIDFLVQSAEESDNIGRGNYHFWLMLSILLLNVPAR 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + T L +N+ EL +I +G SR+ L L +A L L + Sbjct: 62 IVEFMPAAVLVGTITALGQLNKQQELTVIRTSGISRLRLSLSGLMIAFFLGCALIVLAEY 121 Query: 121 -IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P Q L T + ++ R D++ + I + + +L+ I Sbjct: 122 GVAPAQNRA--QWLHHHALNTTAPQTDHGIWLRDGDNI-VYIGAFQADGSLEKIRFY-RP 177 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +I +Q + + D + I + + A + ++ Sbjct: 178 HEHDLEIQESQRATFMQTHWQL---DDNRALCIGSQSSMPITPTTHWQNRILPATIAQLM 234 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 N L L ++ + + +R+ + + ++++ Sbjct: 235 QLKNAYTLRELYTITGFLRAHQLND-QQMSLKLWQRIFLPITTITMVILALPCV---FNT 290 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIH---KIEQNPYYIPILYLFLFCISSIFLLMI 354 R+ + I + + + + + + +L + +F + +FLL Sbjct: 291 RRDGNGARLVIGILLGASYYVVQGIVTKLGLLLHWSTALSALLPILIFALPPLFLLTR 348 >gi|321222550|gb|EFX47622.1| putative Permease [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] Length = 336 Score = 88.9 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 51/340 (15%), Positives = 120/340 (35%), Gaps = 12/340 (3%) Query: 25 FIAWVIQILQRINLVSSSTESLNILLK---ISGYLIPTVLPMVTPFCFAMETTNVLTSMN 81 + + I++ ++ + + + L + +P + + P + L + Sbjct: 1 MLVSLSGIIKFVDQLKKAGQGNYDALGAGMYTLLSVPKDIQIFFPMAALLGALLGLGMLA 60 Query: 82 RNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALT 141 + +EL+++ +G +R+ + V+ AI L + + P+ + A+A + Sbjct: 61 QRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAPQGEQMARNYRAQAMYGGS 120 Query: 142 FSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV---DSRDTQTHKIYYAQSGSIDLDR 198 ++ L+ + ++ ++ I + + L GI I D R + + YA S D + Sbjct: 121 LLSTQQGLWAKDGNN-FVYIERVKGDEELAGISIYAFNDQR--RLQSVRYAASAKFDPEH 177 Query: 199 QAIILND-GEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNN 257 + L+ E ++P S ++ + L + ++S L N Sbjct: 178 KVWRLSQVDESDLQNPKQITGSQTVSGTWKTNLTPDKLGVVALDPDALSISGLHN-YVKY 236 Query: 258 PNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFG 317 + Y+ ++ Q L + L+++ IS F Sbjct: 237 LKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPMGVRVVTGISFGFVFY 296 Query: 318 VF-WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 V F + P +L F + S++L++ K Sbjct: 297 VLDQIFGPLTLVYGIPPIVGALLPSASFFLISLWLMLRKS 336 >gi|260912301|ref|ZP_05918852.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str. F0295] gi|260633602|gb|EEX51741.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str. F0295] Length = 402 Score = 88.9 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 52/361 (14%), Positives = 124/361 (34%), Gaps = 18/361 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 +K + YI+R +++ S L I+ IA V + + + + L I+ +P Sbjct: 42 LKILDWYIIRKFIGTYVFSILLIISIAIVFDVNENLAKFTQFHAPLKAIVFDYYANFVPY 101 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + +E++ + G S L++P + +L+S F Sbjct: 102 FANLFSPLFVFISVIFFTSKLAGTSEIISMLAAGVSFNRLMRPYMVSCLLISGLSFYLSG 161 Query: 120 IIEPKC---RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + P + + + ++ + ++ ++D + I Y+ F + Sbjct: 162 YVIPHGTVIKQNFESMYKNSKKNTSAENVQ----LQVDRGVIAYIQHYDDKAKRGYGFSL 217 Query: 177 DSRDTQTHKIYYAQSG----SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 D + + + S +I + +++ + + + I+ K + E Sbjct: 218 DKFENKKLVSHMTASEIQYDTISDSKYHWQVSNWRIREMKALREKITYGDRKDTLIMMEP 277 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 A+ + L + Y E+HKR+ I I + Sbjct: 278 ADLVFSKGQQETFTNPELSAYISKQIGRGSSNVVQYEVEYHKRIAASFASFILTTIGLSL 337 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISSI 349 + ++ R+ + I L++SFG + + P + LF + + Sbjct: 338 SSRK---RKGGMGLYLGIGLALSFGYILLQTVSATFAVNADTPPMLAAWIPNLLFAVVAY 394 Query: 350 F 350 F Sbjct: 395 F 395 >gi|294012649|ref|YP_003546109.1| putative permease [Sphingobium japonicum UT26S] gi|292675979|dbj|BAI97497.1| putative permease [Sphingobium japonicum UT26S] Length = 367 Score = 88.9 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 123/357 (34%), Gaps = 11/357 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRI-NLVSSSTESLNILLKISGYLIPTV 60 + Y+ R +V + + +L ++++ + L P + Sbjct: 10 RQLGWYMARLFLTRTFAVLAMLVAVLQTLDLLGESGDILAYAGNGDAQLWHYVALRAPQI 69 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + PF + T +L S+N+N+E++ + G S ++ P+L A+ +++ + Sbjct: 70 VARFLPFSVLLGTLIMLASLNQNSEIISMKAAGLSAHQILAPLLAAALGVALISYAFNER 129 Query: 121 IEPKCRSTIKQLSAKAQLAL-TFSYLEENLFFRLDDDLYI--KISKYNPNNTLQGIFIVD 177 I + + + A L + ++ + + R ++L ++ L+ + I + Sbjct: 130 IVARSTARLSAWQAVDYGPLPPETGVKASPWVRDGNNLVTAAIVAGRGTAVQLRKVEIFN 189 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + I A G D ++ +L D + + + + Sbjct: 190 RINNTLTTIVQAPRGHYDASTRSWVLED--ARQFDVARGTERQIGTVRFGRDIRPDQFTL 247 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + S L ++ + +L+ L ++ ++ VAA A Sbjct: 248 AKVDPDALTFSQL-QAAISDLHDAGRPTAELEGSLWHKLSGPLSALLMPILGSVAAFGLA 306 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP----YYIPILYLFLFCISSIF 350 Q + ++L ++ V FS + + P + P L L + +F Sbjct: 307 RSGQLFVRAVLGMALGFAYFVADNFSLAMGNLGAYPPFLAAWAPFLLFLLVGETVLF 363 >gi|330752461|emb|CBL87411.1| predicted permease YjgP/YjgQ [uncultured Flavobacteria bacterium] Length = 357 Score = 88.9 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 53/361 (14%), Positives = 128/361 (35%), Gaps = 8/361 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK F+ YIL+ +F + L + I + + ++I+ + + + + Sbjct: 1 MKIFDWYILKRYLLTFFLMLLLFIPIGITVNLAEKIDRILENKVPFDEVAAYYFDFTIYF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + + + NTE++ ++G S ++P +++I Sbjct: 61 ANLLFPLFLFLSVIWFTSKLANNTEVIAFLSSGISFFRFLRPYFIGGTVIAIVALFLGMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 PK + + K + ++ +++DD YI +S ++ N+ F ++ D Sbjct: 121 WAPKASKGYNEFTYKYLSNKKAVQSQY-IYQQINDDEYIYVSNFDSNSMRGNNFTLEHFD 179 Query: 181 TQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +A + L++ + I + L + + + Sbjct: 180 GNKLEYKIHASAIRFIEKDSNYRLSNYYLRYIGKDHDSIIFKRRIDTLLGFDLLDLTPPK 239 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 A + L + + Y+ +K +W PV +++I+A ++ Sbjct: 240 YVAETLTVHELSDFIKREEARGSSNINRYKVVQYK---KWSLPVSVYILTIIAVAVSSIK 296 Query: 300 RQRKKIHPIFISLSISFGVFW---GFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R+ + + I+ + F + + + P F+F I +I+LL K Sbjct: 297 RRGGMGVNLAFGIVIAMVYVFFDKVFGVMAEQSDFPPVVAVWFPNFIFGILAIYLLFNAK 356 Query: 357 K 357 + Sbjct: 357 R 357 >gi|238028371|ref|YP_002912602.1| hypothetical protein bglu_1g28320 [Burkholderia glumae BGR1] gi|237877565|gb|ACR29898.1| Hypothetical protein bglu_1g28320 [Burkholderia glumae BGR1] Length = 382 Score = 88.9 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 57/380 (15%), Positives = 127/380 (33%), Gaps = 27/380 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + + P+ Sbjct: 1 MRLYEKYFARQIYLTFIFVLFAFSGLFFFFDLISELNSVGHGAYNFGYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + + L I ++ Sbjct: 61 FYEIIPVATLISAIYVFAQMAANSEFTIFRVSGLATNQALRSLLKIGVPLVIVTYLIGEF 120 Query: 121 IEPKC-----RSTIKQLSAKAQLALTFSYLEENLFFRLDDD----LYIKISKYNPNNTLQ 171 I P R ++ L + ++ D+ ++ + +P++T+ Sbjct: 121 IGPYTDQLSERVRLEALGSSVSSNFASGVWVKDTLTARDNGEPVTRFVNVGTLSPDSTIS 180 Query: 172 GIFIVD-SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD------------- 217 + I + Q + A+SG +L D + +PI D Sbjct: 181 NVRIYEFDSKFQLQNVRIAKSGRYAP-PGHWLLTDVTDTQLTPIPPDSHAPKDALNPVYR 239 Query: 218 ISIMKFKSYTLQTE-SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRL 276 + Y+L+++ + +++L + ++ F L + + +TY ++L Sbjct: 240 SEQVSMPQYSLRSDLTPQILSVLLVSPERMSIFNLFRYIQHLRENQQDTQTYDIALWRKL 299 Query: 277 TQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 + ++S+ A I L +SF +F I + N + Sbjct: 300 LYPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLFNTLFSHIGTL--NTWPA 357 Query: 337 PILYLFLFCISSIFLLMIKK 356 P+ I L K Sbjct: 358 PLTAALPALIYLALGLFALK 377 >gi|329907054|ref|ZP_08274546.1| putative Membrane protein; putative permease [Oxalobacteraceae bacterium IMCC9480] gi|327547111|gb|EGF31985.1| putative Membrane protein; putative permease [Oxalobacteraceae bacterium IMCC9480] Length = 378 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 54/382 (14%), Positives = 125/382 (32%), Gaps = 28/382 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y + I R+ L L + + ++ + V + +P Sbjct: 1 MTVLQKYFGKEILRAVLFVLLAFLALFAFFDLINELPAVGRGGYKIQHAFLYIALGLPGY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + VL M N+E I+ +G S + + ++ + F+ + Sbjct: 61 TYELMPIAALIGSIYVLAQMASNSEFTIMRVSGLSTRQAGFMLAKIGLIFVLITFLFGEV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFR---------LDDDLYIKISKYNPNNTLQ 171 I P ++L +AQ T L+ + + ++ + + PN L+ Sbjct: 121 ISPLTAERAERLKQQAQGT-TSKEFRSGLWTKDQIRDGSGAMIGSRFVNVGELLPNGQLK 179 Query: 172 GIFIVD-SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRK-----------SPISKDIS 219 + + + + + + A + DR+ +L+D R S + Sbjct: 180 DVKLYEFDSELRLTSMVTASTADFQGDRR-WLLSDVATTRFALTVFNLAVLPDAPSGIAT 238 Query: 220 IMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQW 279 + + + ++ D+ + L + ++ E Y F K++ Sbjct: 239 TTAPTRELISDITPDILSVTFADPDRMSALDLATYTRHLAENRQVTERYDIAFWKKIIYP 298 Query: 280 LFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISF---GVFWGFSYIIHKIEQNPYYI 336 +F ++++ R IF+ + I + FS+I P Sbjct: 299 FA--VFVMMALALPFAYLHARSGGVSLKIFMGIMIGVSFKLINSLFSHIGLLNTWPPLAT 356 Query: 337 PILYLFLFCISSIFLLMIKKKY 358 I LF ++ L +++ Sbjct: 357 AIAPSLLFLAGALGALWWVERH 378 >gi|238897462|ref|YP_002923139.1| putative permease [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465217|gb|ACQ66991.1| putative permease [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 367 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 47/355 (13%), Positives = 124/355 (34%), Gaps = 7/355 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI R I + +M+ +V ++ +I+ ++++ V S+ + +P + Sbjct: 4 GILDRYIGRSILNTIIMTLFMLVSLSGIIKFIEQLRKVGEGNYSVFAAAIYTLLSVPNDI 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ +EL+++ +G S + ++ V+ AI+L + I + Sbjct: 64 MIFFPMAALIGGILGLGALATRSELVVVQASGFSHMQIVLSVMKTAIILFLLSIIIGEWL 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P T K + + ++ + D +I I++ ++ L G+ I Sbjct: 124 APLADQTASHYRTKMIYGGSVISTQSGIWAKDKSD-FIYINQVINHHELSGVHIYHFDAH 182 Query: 182 QTHKIY-YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 YA + + + D + + + + + + + Sbjct: 183 DRLISIRYAATAIFEKGAWQLSQIDESNLSDTKKIQGSQTLS-EKWETSLTPYKLGIVAM 241 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGL--ISIVAADKRAL 298 + ++ L + + + Y + +++ + L +S + R+ Sbjct: 242 DPDSLSIMGLYD-YVKYLKQVGQDSDRYELKMWQKIFSPFSITVMILLSLSFIFGPLRST 300 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + + I + F + + +P L LF S++LL+ Sbjct: 301 ATGLRIVTGICFGFVFYL-LDKIFGPLSLLYQFSPILGAALPSVLFFSISLYLLL 354 >gi|293449327|ref|ZP_06663748.1| hypothetical protein ECCG_02358 [Escherichia coli B088] gi|291322417|gb|EFE61846.1| hypothetical protein ECCG_02358 [Escherichia coli B088] Length = 359 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 55/369 (14%), Positives = 132/369 (35%), Gaps = 21/369 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ V+ + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVNPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIM--------KFKSYTLQTE 231 YA+S +I+ D+ IL+ G H+K K+ + F S L+ Sbjct: 181 DLSLESYIYARSATIEDDKT-WILH-GVNHKKWLNGKETLEILDNLAWQSTFTSMNLEEL 238 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S ++ ++ + +++L + YR ++L + + L+++ Sbjct: 239 SMPGNSFSVRQLNHYINYL--------QETGQPSSEYRLALWEKLGHPILTLAMILLAVP 290 Query: 292 AADK--RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 R+ + + + L + + P L + + I Sbjct: 291 FTFSAPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVAALGLPMAFVLAALI 350 Query: 350 FLLMIKKKY 358 + + +++ Sbjct: 351 LVYLFDRQH 359 >gi|218696688|ref|YP_002404355.1| hypothetical protein EC55989_3395 [Escherichia coli 55989] gi|218353420|emb|CAU99485.1| conserved hypothetical protein; putative membrane protein [Escherichia coli 55989] Length = 386 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 55/369 (14%), Positives = 132/369 (35%), Gaps = 21/369 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ V+ + + +P Sbjct: 28 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVNPGGYRWTQAVLVVLMTLPRT 87 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 88 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 147 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 148 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 207 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIM--------KFKSYTLQTE 231 YA+S +I+ D+ IL+ G H+K K+ + F S L+ Sbjct: 208 DLSLESYIYARSATIEDDKT-WILH-GVNHKKWLNGKETLEILDNLAWQSTFTSMNLEEL 265 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S ++ ++ + +++L + YR ++L + + L+++ Sbjct: 266 SMPGNSFSVRQLNHYINYL--------QETGQPSSEYRLALWEKLGHPILTLAMILLAVP 317 Query: 292 AADK--RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 R+ + + + L + + P L + + I Sbjct: 318 FTFSAPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVAALGLPMAFVLAALI 377 Query: 350 FLLMIKKKY 358 + + +++ Sbjct: 378 LVYLFDRQH 386 >gi|241663807|ref|YP_002982167.1| permease YjgP/YjgQ family protein [Ralstonia pickettii 12D] gi|240865834|gb|ACS63495.1| permease YjgP/YjgQ family protein [Ralstonia pickettii 12D] Length = 397 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 52/398 (13%), Positives = 122/398 (30%), Gaps = 43/398 (10%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M +E Y R I F+ ++ + +L + V +L + PT Sbjct: 3 MPVYEKYFARQIYGVFVFILFAVLALFIFFDMLGELGSVVGRYTTLVAFFHVM-LQAPTR 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + V + M +E I G + + +A+ L++ +I Sbjct: 62 VYEVIPVAALISAIYVFSQMASQSEFTIFRVAGLDTRRALLSLFKIALPLALVTYIFGEF 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRL-----DDD------LYIKISKYNPNNT 169 I PK +++ +A A + ++ + D ++ + P+ + Sbjct: 122 IGPKAEEYAQKVRLEALGATVSAGFRSGVWVKDRGPAKADGTGGEVTRFVNVGALQPDQS 181 Query: 170 LQGIFIVD-SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRK----------------- 211 ++G+ I + D + I A+ Q LND R Sbjct: 182 IKGLRIYEFDSDYRLSSIRVAEQARYQ-GHQNWQLNDVTETRFVEFPRKPGTVAPQDTVQ 240 Query: 212 -SPISKDISIMKFKSYTLQTE--------SANSSTIVLKANDQNLSFLLNPNPNNPNYRP 262 P + D F+ + + ++++ D+ + L + Sbjct: 241 AVPGAPDALAPDFRGEQTKLPHQEMRSELTPQILSVLMVTPDRMATLDLFQYIRHLRDNK 300 Query: 263 ELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGF 322 + + Y K++ ++ +++ A R +F + + Sbjct: 301 QDTQRYEIALWKKVVYPFTVLVMMALALPFA--YLHARAGAVGLKVFGGIMLGLSFQLVN 358 Query: 323 SYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + H N + + + L +I ++ + Sbjct: 359 NLFSHVGLLNTWPAIFTAIVP-GALYLALALISLRWVE 395 >gi|171463872|ref|YP_001797985.1| permease YjgP/YjgQ family protein [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193410|gb|ACB44371.1| permease YjgP/YjgQ family protein [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 386 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 65/380 (17%), Positives = 128/380 (33%), Gaps = 37/380 (9%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 +E Y+ + I +F +V + IL + LV T +L + L + P+ + Sbjct: 8 IYERYLAKQIYAAFGFILFALVALFLFFDILSELGLV-QGTYTLPLALLHALLKAPSRIS 66 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + + V + +E I+ G + + ++I L I I Sbjct: 67 EIIPIAGLIGSIYVFAMLASQSEFTILRIAGLDVKRGLIALTKISIPLIALTLIMSEWIG 126 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFR-----------LDDDL-YIKISKYNPNNTL 170 P + Q+ KA + S ++ + + + Y+ + K + +N + Sbjct: 127 PYTEAKSDQIRMKAMGSAYSSQFRTGVWVKDRLRDEDGSGPVRPGVRYVNVGKVDKDNEI 186 Query: 171 QGIFIVDSRDT-QTHKIYYAQSGSIDLDRQAIILNDGEVHRK------SPISKDISIMKF 223 + I + + DT I A SG D +LND R P++ S F Sbjct: 187 RNIRMYEFDDTYHLLSIRSAVSGQFDETG-VWVLNDVTETRFKETKQSDPLNPVFSAQTF 245 Query: 224 KSYTLQTESANSSTI-------VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRL 276 + ES + I K + +L ++ N + + F K++ Sbjct: 246 TRPIVTLESEVTPQILSVLLISPEKMSIMSLGRFISHLREN----KQDAHRHSIAFWKKV 301 Query: 277 TQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 + +++ A + I L +SF +F + + P I Sbjct: 302 VYPFTIFVMLTLALPFAYLKVRAGSVGIKVFGGIMLGMSFQLFNSLFSNVGLLGSWPALI 361 Query: 337 -----PILYLFLFCISSIFL 351 P+LY L ++ Sbjct: 362 TALTPPLLYFLLALAGLRWV 381 >gi|296274436|ref|YP_003657067.1| permease YjgP/YjgQ family protein [Arcobacter nitrofigilis DSM 7299] gi|296098610|gb|ADG94560.1| permease YjgP/YjgQ family protein [Arcobacter nitrofigilis DSM 7299] Length = 339 Score = 88.5 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 93/207 (44%), Gaps = 4/207 (1%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y+L +F L + FI +I +++ ++ S T ++ L + Y +P ++ Sbjct: 2 KLKQYLLSQFSNTFFPIFLVLFFITSIIFLVRIASITSVITLNIFELGTLYAYNLPNIIF 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P F + L+ ++ EL+++ + G + ++K L + L+S+ L I + Sbjct: 62 YTMPISFFVAMVITLSKLSSEYELIVVTSFGLNPSNILKVFLPITFLISLSLLILSIGLI 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 PK + +Q+ + ++ + F + D I ISK + + + + + + + Sbjct: 122 PKTKYLSQQMINQKTKE-ANFNIKASEFGQKFGDWLIYISKKD-DKLYEEVKLFKTENKG 179 Query: 183 THKIYYAQSGSIDLDRQAI--ILNDGE 207 T + A++ ++ D + IL DG+ Sbjct: 180 TDQFIIAKNARLNNDAGNLSFILKDGK 206 >gi|296137010|ref|YP_003644252.1| permease YjgP/YjgQ family protein [Thiomonas intermedia K12] gi|295797132|gb|ADG31922.1| permease YjgP/YjgQ family protein [Thiomonas intermedia K12] Length = 365 Score = 88.5 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 61/360 (16%), Positives = 128/360 (35%), Gaps = 10/360 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M++ ++L + + + L + + + I +L ++ + SL+ L +P+ Sbjct: 1 MRTVRRFLLLHVLSAVGLVTLAFLALLFFIDMLNDLSNLGKPGFSLSGTLLHVALSMPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 V P + L S+ ++E I+ +G S + +L LA L + LF+ Sbjct: 61 AYEVLPIATLVGGVFALASLAASSEFTILRISGLSPRAALGLLLQLAAALVVTLFLLGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL----YIKISKYNPNNTLQGIFIV 176 + P + + + L ++ R D D + I N L I I Sbjct: 121 LAPAA-GQLSARLQAGGGSGIGTQLASGVWLRNDSDRSGNQTVNIKAINTRGDLTDIHIY 179 Query: 177 D-SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-DISIMKFKSYTLQTESAN 234 + Q +A SG + +L + + + +++ SY +T + Sbjct: 180 VLNAQAQIAAELHAPSGQYEGGGT-WMLQNVTRTELPQQTGAALKVIQLPSYRWRTSLSP 238 Query: 235 SS-TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 S ++L + D+ + L + + E Y + K+L V+ L+++ A Sbjct: 239 SVLGVLLLSPDKMSAIDLWRYIQHLRANHQAAERYEIQLWKKLFYPFSAVVMLLLALPFA 298 Query: 294 DKRALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 + I L I+F + FS + P + + LF + + Sbjct: 299 YLHTRSKGVSGKVLAGIVLGIAFILLNTLFSSLGILGTWPPAITAAMPMLLFGGLGLIVF 358 >gi|323144744|ref|ZP_08079321.1| lipopolysaccharide export system permease protein LptG [Succinatimonas hippei YIT 12066] gi|322415495|gb|EFY06252.1| lipopolysaccharide export system permease protein LptG [Succinatimonas hippei YIT 12066] Length = 355 Score = 88.1 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 50/356 (14%), Positives = 123/356 (34%), Gaps = 7/356 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI + + + L+ + + +I + ++ + + L+ +P ++ Sbjct: 4 GILDRYIGKNVFFTILLVTFCLTLLTTLITFVDQMRYIGRGSVDFLFLVSHVALEVPGIV 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ R +EL+++ + G SR ++ L I L + + + Sbjct: 64 VLFFPVAVLLGGVIALGNLARTSELIVMQSIGISRTGIVLSALKTVIPLILVIVCLGEFV 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + A S + L+ R + +I I + +L I + Sbjct: 124 VPRVEQYAENRLNFASSNGNLSVTNDGLWLR-EGHSFIGIRYTMSDGSLLDIVRYEVEGK 182 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 A+SG + ++ D + + + + ++L + +K Sbjct: 183 NLKAFSRAKSGVYSDGK--WVMRDVRKTVFAENKVIRTSLAEEKWSLNLTPERVEVVGVK 240 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADKRALV 299 + L++ N + +YR E + + L ++ L++ V R++ Sbjct: 241 GYNLTARGLID-YINYLEENNQDASSYRLELYNKFMSPLTMIVMLLLAASTVFGPLRSMT 299 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + I + G + + P L +F + +I LL K Sbjct: 300 MGARVLAGIALGFGFYLANQIGAPFAL-VYGIPPILGASLPTLVFMLLAIALLRRK 354 >gi|294341187|emb|CAZ89588.1| putative permease YjgP/YjgQ [Thiomonas sp. 3As] Length = 365 Score = 88.1 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 61/360 (16%), Positives = 128/360 (35%), Gaps = 10/360 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M++ ++L + + + L + + + I +L ++ + SL+ L +P+ Sbjct: 1 MRTVRRFLLLHVLSAVGLVTLAFLALLFFIDMLNDLSNLGKPGFSLSGTLLHVALSMPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 V P + L S+ ++E I+ +G S + +L LA L + LF+ Sbjct: 61 AYEVLPIATLVGGVFALASLAASSEFTILRISGLSPRAALGLLLQLAAALVVTLFLLGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL----YIKISKYNPNNTLQGIFIV 176 + P + + + L ++ R D D + I N L I I Sbjct: 121 LAPAA-GQLSARLQAGGGSGIGTQLASGVWLRNDSDRSGNQTVNIKAINTRGDLTDIHIY 179 Query: 177 D-SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-DISIMKFKSYTLQTESAN 234 + Q +A SG + +L++ + + + + SY +T + Sbjct: 180 VLNAQAQIAAELHAPSGQYEGGGT-WMLHNVTRTELPQQTGAALKVTQLPSYRWRTSLSP 238 Query: 235 SS-TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 S ++L + D+ + L + + E Y + K+L V+ L+++ A Sbjct: 239 SVLGVLLLSPDKMSAIDLWRYIQHLRANHQAAERYEIQLWKKLFYPFSAVVMLLLALPFA 298 Query: 294 DKRALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 + I L I+F + FS + P + + LF + + Sbjct: 299 YLHTRSKGVSGKVLAGIVLGIAFILLNTLFSSLGILGTWPPAITAAMPMLLFGGLGLIVF 358 >gi|289678194|ref|ZP_06499084.1| permease YjgP/YjgQ [Pseudomonas syringae pv. syringae FF5] Length = 284 Score = 88.1 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 99/272 (36%), Gaps = 31/272 (11%) Query: 93 GTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFR 152 G S+ L+ + A L+ + + + P+ + L + F L F Sbjct: 1 GRSQQRLLAITMGPATLVGLLVAWLSFSLAPQGATQFSLLINQQDAMTEFDTLVPGRFQA 60 Query: 153 LDDDLYI-KISKYNPNNT-LQGIFI------VDSRDTQTHKIYYAQSGSIDLDRQA---I 201 L D I + + + + L G+FI D + A+ G ++ + Sbjct: 61 LRDGTRITYTKELSEDRSQLAGVFISEKRMSSDKSKDNGITVLVAEKGHQEVRPNGSRFL 120 Query: 202 ILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLL-NPNPNNPNY 260 IL +G + +P + D ++K+ +Y S + S L+ NP P + Sbjct: 121 ILENGYRYDGNPGAADYRVIKYDTYGAMLPKPEISEEITDREAIPTSELIGNPAPRS--- 177 Query: 261 RPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFW 320 +E R++ L I L++I R RQ + + L + ++ Sbjct: 178 --------VAELQWRISLPLSVFIVTLMAIP--LSRVNPRQGRYLK-----LLPAILLYM 222 Query: 321 GFSYIIHKIEQNPYYIPI-LYLFLFCISSIFL 351 + I+ + + + L L ++ + +I+L Sbjct: 223 SYLAILISVRSSLEKGKLPLSLGMWWVHAIYL 254 >gi|294673581|ref|YP_003574197.1| hypothetical protein PRU_0844 [Prevotella ruminicola 23] gi|294471872|gb|ADE81261.1| putative membrane protein [Prevotella ruminicola 23] Length = 393 Score = 88.1 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 53/361 (14%), Positives = 123/361 (34%), Gaps = 16/361 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 +K + YI+ +++ S + I+ I+ V + + + S+ L I+ +P Sbjct: 33 LKRLDRYIIAKFIGTYIFSIILIISISIVFDVNENLAKFSTYNAPLKAIVFDYYANFVPY 92 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + G S L++P + A L++ F Sbjct: 93 FANLFSPLFVFIAVIFFTSKLAGNSEIIAMLAAGVSFKRLLRPYMISAALIAAVNFYLGG 152 Query: 120 IIEPKCRSTIKQLSAKAQL---ALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + PK AK + L+ S ++ + + + +Y+ F + Sbjct: 153 YVIPKGNQVKMDFEAKYKNKERNLSASNVQ----LMVQPGVIAYLQQYDDVTKTGYGFSL 208 Query: 177 DSRDTQTHKIYYAQSG----SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 D + + + S SI R ++ + ++I +Q E Sbjct: 209 DKFENKKLVSHMTASVIRYDSISDSRYHWKAQSYKIRTLKGLREEIESGAVIDTLIQMEP 268 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + + + L + + Y E+HKR+ I +I + Sbjct: 269 MDLVFSKGQQETLTSTELSDYISKQVERGSVNVVQYEVEYHKRIATSFASFILTMIGVSL 328 Query: 293 ADKRALVRQRKKIHPIFISLSISFG-VFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + ++ R+ + I L++SFG + I + + ++ I Sbjct: 329 SSRK---RKGGMGMYLGIGLALSFGYILLQTISATFAINADTPALLAAWIPNLLYVIIAY 385 Query: 352 L 352 Sbjct: 386 F 386 >gi|288926740|ref|ZP_06420651.1| membrane protein [Prevotella buccae D17] gi|288336470|gb|EFC74845.1| membrane protein [Prevotella buccae D17] Length = 367 Score = 88.1 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 54/365 (14%), Positives = 126/365 (34%), Gaps = 11/365 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPTV 60 K + YI++ ++ S I+ IA V + ++ + I+ IP Sbjct: 8 KILDWYIIKKFIGTYFFSIALIISIAIVFDFNENLSKFTQYHAPWRAIVFDYYANFIPYY 67 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +P + + + N+E++ + G S L++P + +L++ + Sbjct: 68 SNLFSPLFVFIAVIFFTSKLAGNSEIIAMLAAGVSFKRLMRPYMISCVLIAALTYYLGAY 127 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTL-QGIFIVDSR 179 P + I+Q T + +N+ ++D + I Y+ N G + Sbjct: 128 EIPHG-TVIRQDFEALYRNNTKNTAADNVQLQVDKGVIAYIQHYDNNTKKGYGFKLNKFE 186 Query: 180 DTQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 D + A D + + + + + + + I+ K + E + Sbjct: 187 DKKLVSDLTAMEVQYDTISDTKFHWRMRNWKQRKLQGLKEHITSGAEKDTVILMEPTDLV 246 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + + Y+ E+HKR+ I +I + + ++ Sbjct: 247 YSKGQQETFTSPELREYISKQIDRGSSNVVQYQVEYHKRIATSFASFILTVIGLSLSSRK 306 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF-LFCISSIFLLMIK 355 R+ + + L++SFG + + N P+L + + +I + Sbjct: 307 ---RKGGMGLYLGLGLALSFG-YIMLQTVSATFAINAGAPPMLAAWTPNMVFAIVAYFLY 362 Query: 356 KKYTK 360 +K K Sbjct: 363 RKAPK 367 >gi|238921309|ref|YP_002934824.1| hypothetical protein NT01EI_3453 [Edwardsiella ictaluri 93-146] gi|238870878|gb|ACR70589.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 356 Score = 88.1 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 46/362 (12%), Positives = 120/362 (33%), Gaps = 14/362 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI R I + +M+ +V ++ +I+ + ++ V S+ + +P + Sbjct: 3 GVLDRYIGRTIFNTIMMTLFMLVSLSGIIKFVDQLRKVGQGDYSVAGAGLFTLLSVPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L + + +EL+++ G +R+ + V+ AI L + + Sbjct: 63 EIFFPMAALLGALLGLGMLAQRSELVVMQAAGFTRMQVASAVMKTAIPLVLLTMAIGEWV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR-D 180 P+ + A+ + + L+ + D + ++ IS+ + TL G+ I Sbjct: 123 APQGDQAARNYRAQQMYGGSLLSTQGGLWAK-DGNQFVYISQVVNDRTLGGVSIYTLDAQ 181 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKS-----YTLQTESANS 235 + + YA S + D + + + D ++ + Sbjct: 182 RKLTSLRYAASATFDGKQWKL------AQVEESNLSDPKMITGSRTLSGVWKTNLTPDKL 235 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + + + ++S L + Y+ ++ L + L+++ Sbjct: 236 GVVAVSPDSLSISGLYY-YVKYLKQSGQESSRYQLNLWIKVFAPLSVAVMMLMALSFIFG 294 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 I F V + + P I + + L+++ Sbjct: 295 PLRSVPMGVRVLTGICFGFVFYVLDQIFGPMSLVYNVPPVIGAVLPSALFLGLSVYLLLR 354 Query: 356 KK 357 ++ Sbjct: 355 RR 356 >gi|71275899|ref|ZP_00652182.1| permease YjgP/YjgQ [Xylella fastidiosa Dixon] gi|71899263|ref|ZP_00681425.1| permease YjgP/YjgQ [Xylella fastidiosa Ann-1] gi|71163276|gb|EAO12995.1| permease YjgP/YjgQ [Xylella fastidiosa Dixon] gi|71730996|gb|EAO33065.1| permease YjgP/YjgQ [Xylella fastidiosa Ann-1] Length = 408 Score = 88.1 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 40/281 (14%), Positives = 102/281 (36%), Gaps = 17/281 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L +SF+ + + ++ + ++ + ++ +LL G + Sbjct: 48 MPKLDRYLLSDFTQSFIATLIVLMLVGVGGVLVDILGSIADGHFPAKLLLSQLGLRFISY 107 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP++ P + L + R++E+ +I + G ++ +L L + + + + + Sbjct: 108 LPLLLPLALMLGLLLSLGRLYRDSEMAVITSIGVGPGRMLPSILGLVLPVVVLIGVCSLW 167 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSR 179 + P T L +A ++ + LE F + D + +S + + T L +F+ + Sbjct: 168 LAPWANRTANDLLEQANRSIIMAGLEAGTFTPMPDGGVVYLSSLSSDGTKLNAVFMQSQK 227 Query: 180 DTQTHKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISK--DISIMKFKSYTLQTESAN 234 D + A+ G + + + L DG+ + ++ F + Sbjct: 228 D-DRIAVVTAKRGEMYVQGDKGRYLRLEDGQRVDGPADGAALNYRVLTFARNDALLPELS 286 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKR 275 + L+ + +++ H R Sbjct: 287 VVYDSNHPDILPTFNLI----------GDPRREAQAQLHAR 317 >gi|91212393|ref|YP_542379.1| hypothetical protein UTI89_C3401 [Escherichia coli UTI89] gi|218560054|ref|YP_002392967.1| hypothetical protein ECS88_3361 [Escherichia coli S88] gi|237706274|ref|ZP_04536755.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|91073967|gb|ABE08848.1| hypothetical protein UTI89_C3401 [Escherichia coli UTI89] gi|218366823|emb|CAR04593.1| conserved hypothetical protein; putative membrane protein [Escherichia coli S88] gi|226899314|gb|EEH85573.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] Length = 386 Score = 88.1 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 53/365 (14%), Positives = 130/365 (35%), Gaps = 24/365 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 28 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 87 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 88 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 147 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + + N+ + + ++ + N G+ I RD Sbjct: 148 VASPLQQQALQIKSTATALGEDNDIIGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 207 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK-------FKSYTLQTES 232 YA+S +I+ D+ IL+ + + + + F S L+ S Sbjct: 208 DLSLESYIYARSATIEDDKT-WILHGVNYKKWLNGKETLETLDNLAWQSAFTSMNLEELS 266 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 +T ++ + + +L + Y ++L Q + + L+++ Sbjct: 267 MPGNTFSVRQLNHYIHYL--------QDTGQPSSEYHLALWEKLGQPILTLAMILLAVPF 318 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-----FLFCIS 347 ++ R + + + + + + +++ P+ L F+ Sbjct: 319 --TFSVPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVAL 376 Query: 348 SIFLL 352 S+ Sbjct: 377 SLVYW 381 >gi|257462588|ref|ZP_05626998.1| hypothetical protein FuD12_01969 [Fusobacterium sp. D12] Length = 270 Score = 88.1 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 40/265 (15%), Positives = 94/265 (35%), Gaps = 4/265 (1%) Query: 89 IDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEEN 148 +++ G ++KP+L+L F+ + I P+ ++ LS+K L+E Sbjct: 1 MNSIGMDIRAILKPILYLGFASMFFILFLQESIIPRSYIKLQYLSSKIAYENPVFQLKER 60 Query: 149 LFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEV 208 F ++ + I K + +GI I ++ T + + D +I+L Sbjct: 61 TFMNNLENYSLYIDKVGRDKHAKGILIFENDKKSTFPVVLVGHEAYWRD-SSIVLEKANF 119 Query: 209 HRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETY 268 F+ ++ ++ S + +K + + + E Y Sbjct: 120 ISFDEKGVRKLTGSFEDKRVELQAY-FSDLKIKVKETEMMSIATLLQEMKGKTKEEKLIY 178 Query: 269 RSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHK 328 + E H++L V+ ++ + R KK + L+I F + I+ Sbjct: 179 KVEIHRKLALPFSSVMLSMLGV--FLSIGHQRSGKKAGILVGILTIFFYISLLNIGIVLA 236 Query: 329 IEQNPYYIPILYLFLFCISSIFLLM 353 + ++L ++++ + Sbjct: 237 NVGKIPILLGVWLPNLLLAALTYRL 261 >gi|117625285|ref|YP_854457.1| putative permease [Escherichia coli APEC O1] gi|115514409|gb|ABJ02484.1| putative permease [Escherichia coli APEC O1] gi|294491111|gb|ADE89867.1| putative permease, YjgP/YjgQ family [Escherichia coli IHE3034] gi|307625417|gb|ADN69721.1| hypothetical protein UM146_01460 [Escherichia coli UM146] gi|315288788|gb|EFU48186.1| conserved hypothetical protein [Escherichia coli MS 110-3] gi|323951498|gb|EGB47373.1| YjgP/YjgQ permease [Escherichia coli H252] gi|323957870|gb|EGB53584.1| YjgP/YjgQ permease [Escherichia coli H263] Length = 359 Score = 88.1 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 53/365 (14%), Positives = 130/365 (35%), Gaps = 24/365 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDNDIIGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK-------FKSYTLQTES 232 YA+S +I+ D+ IL+ + + + + F S L+ S Sbjct: 181 DLSLESYIYARSATIEDDKT-WILHGVNYKKWLNGKETLETLDNLAWQSAFTSMNLEELS 239 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 +T ++ + + +L + Y ++L Q + + L+++ Sbjct: 240 MPGNTFSVRQLNHYIHYL--------QDTGQPSSEYHLALWEKLGQPILTLAMILLAVPF 291 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-----FLFCIS 347 ++ R + + + + + + +++ P+ L F+ Sbjct: 292 --TFSVPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVAL 349 Query: 348 SIFLL 352 S+ Sbjct: 350 SLVYW 354 >gi|29346244|ref|NP_809747.1| hypothetical protein BT_0834 [Bacteroides thetaiotaomicron VPI-5482] gi|253568323|ref|ZP_04845734.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|298385619|ref|ZP_06995177.1| membrane protein [Bacteroides sp. 1_1_14] gi|29338139|gb|AAO75941.1| putative permease [Bacteroides thetaiotaomicron VPI-5482] gi|251842396|gb|EES70476.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|298261760|gb|EFI04626.1| membrane protein [Bacteroides sp. 1_1_14] Length = 365 Score = 88.1 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 56/351 (15%), Positives = 125/351 (35%), Gaps = 18/351 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 +K + YI++ +++ + I+ IA V ++++ + + I+ + IP Sbjct: 7 IKRLDWYIIKKFLGTYVFAIALIISIAVVFDFNEKMDKLMEHEAPWDKIIFEYYMNFIPY 66 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + +TG S +++P + A +++ F+ + Sbjct: 67 FSNLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMMRPYMISAAIIAAATFMMSS 126 Query: 120 IIEPKC---RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 I PK R + K + + ++ +D + I YN F + Sbjct: 127 FIIPKGSVTRLNFEDKYIKPKKVNSVRNVQ----LEVDSGVIAYIDNYNDGMKTGNRFSL 182 Query: 177 DS-RDTQTHKIYYAQSGSIDLDR-QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 D D + A+ + D ++D V + + I K Sbjct: 183 DKFVDKKLVSHLTARRITYDTTTVNKWTIHDYMVRELDGLKEK--ITKGDRIDSIINMDP 240 Query: 235 SSTIVLKANDQNLS--FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 S +++K + L+ L ++ + E+HKR+ I +I + Sbjct: 241 SDFLIMKNQQEMLTSPELSEYIEKQKRRGFANIKEFEIEYHKRIAMSFASFILTIIGVS- 299 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 R I + LS S + F I N P + +++ Sbjct: 300 LSSRKTKGGMGLHLGIGLGLSFS---YILFQTITSTFAINGNVPPAIAVWI 347 >gi|88703587|ref|ZP_01101303.1| Predicted permease YjgP/YjgQ family protein [Congregibacter litoralis KT71] gi|88702301|gb|EAQ99404.1| Predicted permease YjgP/YjgQ family protein [Congregibacter litoralis KT71] Length = 352 Score = 88.1 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 42/204 (20%), Positives = 82/204 (40%), Gaps = 7/204 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTES--LNILLKISGYLIP 58 M+ Y+ R + S L+ L IV + + I+ S + S + + +P Sbjct: 1 MRKLNRYVARTVWLSILLVLLVIVG---IDGLSAFIDESDSRSASYGFAEIGRYVMLTMP 57 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + PF + L + +EL+++ G S L VL A+++++F F+ Sbjct: 58 RRVYEFIPFAALIGALIGLGQLASTSELVVMRAAGISNGRLAWMVLKQALVIAVFGFLLG 117 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD- 177 I PK + A A+ A E+ ++ R D ++ + P+N + G+ + Sbjct: 118 EYIAPKAEQQAQSGRAIARYAGRQVDTEQGIWRR-DGAVFFHVQAIAPDNEVFGVTAYEF 176 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAI 201 D + +A SG D + + Sbjct: 177 EEDGWMQRALFADSGRYDGEGWRL 200 >gi|187929752|ref|YP_001900239.1| permease YjgP/YjgQ family protein [Ralstonia pickettii 12J] gi|309781532|ref|ZP_07676268.1| membrane protein [Ralstonia sp. 5_7_47FAA] gi|187726642|gb|ACD27807.1| permease YjgP/YjgQ family protein [Ralstonia pickettii 12J] gi|308919945|gb|EFP65606.1| membrane protein [Ralstonia sp. 5_7_47FAA] Length = 397 Score = 88.1 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 50/398 (12%), Positives = 121/398 (30%), Gaps = 43/398 (10%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M +E Y R I F+ ++ + +L + V +L + PT Sbjct: 3 MPVYEKYFARQIYGVFVFILFAVLALFIFFDMLGELGSVVGRYTTLVAFFHVM-LQAPTR 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + V + M +E I G + + +A+ L++ ++ Sbjct: 62 VYEVIPVAALISAIYVFSQMASQSEFTIFRVAGLDTRRALLSLFKIALPLALVTYLFGEF 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRL-----DDD------LYIKISKYNPNNT 169 I PK +++ +A A + ++ + D ++ + P+ + Sbjct: 122 IGPKAEEYAQKVRLEALGATVSAGFRSGVWVKDRGPAKPDGTGGEVTRFVNVGALQPDQS 181 Query: 170 LQGIFIVD-SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRK----------------- 211 ++G+ I + D + I A Q LND R Sbjct: 182 IKGLRIYEFDSDYRLSSIRVADQARYQ-GHQNWQLNDVTETRFVEFPRKPGTVAPQDTVQ 240 Query: 212 -SPISKDISIMKFKSYTLQTE--------SANSSTIVLKANDQNLSFLLNPNPNNPNYRP 262 P + D F+ + + ++++ D+ + L + Sbjct: 241 AVPGAPDALAPDFRGEQTKLPHQEMRSELTPQILSVLMVTPDRMATLDLFQYIRHLRDNK 300 Query: 263 ELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGF 322 + + Y K++ ++ +++ A R +F + + Sbjct: 301 QDTQRYEIALWKKVVYPFTVLVMMALALPFA--YLHARAGAVGLKVFGGIMLGLSFQLVN 358 Query: 323 SYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + H N + + + L ++ ++ + Sbjct: 359 NLFSHVGLLNTWPAIFTAIVP-GALYLALALVSLRWVE 395 >gi|301058948|ref|ZP_07199917.1| permease, YjgP/YjgQ family [delta proteobacterium NaphS2] gi|300446944|gb|EFK10740.1| permease, YjgP/YjgQ family [delta proteobacterium NaphS2] Length = 355 Score = 88.1 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 63/362 (17%), Positives = 129/362 (35%), Gaps = 17/362 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK ++YI + FL+ L + + +I+ L +++ V + L + +P Sbjct: 1 MKLLDIYIGSRFLKCFLLVILILAVLFSLIEFLSQLDDVGKGMYRVENALLLVMLTLPKC 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L + + ELL + N G S + PV +L+ + I Sbjct: 61 LLDLLPISALLGGVISLGLLADHGELLAMQNAGISAPRVCAPVFATLMLVIMTSGIMAET 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P ++ +A + F+ + YI + K G+ I + Sbjct: 121 IIPDMEQMARKSRTRALYGAGVNVTRHG-FWARRQNAYIHVHKILDEGVAAGVDIFEFDP 179 Query: 181 TQTHKIYY-AQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 K + A S I L Q L + + + ++I S+TL+ + + Sbjct: 180 RGRLKTFTHALSARI-LGHQQWSLT--GIRQTVFKDRGVAIKGAASWTLEPFLSPDQVAL 236 Query: 240 LKANDQNLSFLLNPN----PNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 L + + L P+ + + YR ++L L + L S+ Sbjct: 237 L---ELSPYCLSTPDLIGYIKALEDGGQNADPYRLALWRKLGVPLTTGVMVLFSVTFVLG 293 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHK---IEQNPYYIPILYLFLFCISSIFLL 352 R+ + I ++ I +++ I+H + NP +L + +++ L Sbjct: 294 A--NRKVRAGSRITMASLIGLLLYFADQLIMHTGLLLNLNPPITAMLPVVFISGLAVWRL 351 Query: 353 MI 354 + Sbjct: 352 RL 353 >gi|325971215|ref|YP_004247406.1| permease YjgP/YjgQ family protein [Spirochaeta sp. Buddy] gi|324026453|gb|ADY13212.1| permease YjgP/YjgQ family protein [Spirochaeta sp. Buddy] Length = 361 Score = 88.1 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 48/362 (13%), Positives = 116/362 (32%), Gaps = 19/362 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI+R I ++ + + + + ++ + S ++ K++ P Sbjct: 1 MKVIDRYIIRSIASVAFVTLMLCTLMLLSVDLFANLDSYLTRKVSYLMIAKLTLLYTPEA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + L+ + N EL+ + +G S ++ P+L + LS F F Sbjct: 61 VLFALGPALLFSASFFLSQLQANNELICLMGSGLSYRRIVIPILMFGLALSTFQFGFSEY 120 Query: 121 I-EPKCRST--IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKY-NPNNTLQGIFIV 176 + P + + + + + + +Y + L + +V Sbjct: 121 VHIPLSKEREVQEDSLFGLRSTYDNRNI---TLRDPEGAYVVHARQYSDREKRLAQVMLV 177 Query: 177 DSRDTQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDI-----SIMKFKSYTLQT 230 + + A + ++ L + + ++ S+TLQ Sbjct: 178 LIDEKGSLKSRIDAPWAYWEEEKGIWRLEQARNQQVDSSLLVLHQTEEQVLYVDSFTLQP 237 Query: 231 ESANSSTIVLKANDQNL--SFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 + + +K + +L +PN P+L + KRL L P++ I Sbjct: 238 SFFRNVSNDIKTMELRTAYHYLQRIAELDPNRYPQLATDFA----KRLLDSLNPLVMLFI 293 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 + + K I I + V + + P + + + + + Sbjct: 294 ACAISYKYKKNVLLFSIITSLGIAVIYYVVQMVTLIMAKQAVIGPLWGMAIPMIVIVCIA 353 Query: 349 IF 350 + Sbjct: 354 LA 355 >gi|71899265|ref|ZP_00681427.1| permease YjgP/YjgQ [Xylella fastidiosa Ann-1] gi|71730998|gb|EAO33067.1| permease YjgP/YjgQ [Xylella fastidiosa Ann-1] Length = 385 Score = 88.1 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 51/377 (13%), Positives = 129/377 (34%), Gaps = 29/377 (7%) Query: 1 MKSF----ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYL 56 MK F + Y+ R + + L++ L ++ + V + + + S + Y Sbjct: 18 MKLFPCLHDRYVARAVVATVLLTWLVLLGLDVVNGFASEVRDIGKGSYSFGHAIAYIAYT 77 Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 +P + P + L + +EL + G SR L V+ + + + + + Sbjct: 78 VPRRAYTLFPTAAVIGMLLGLGQLAATSELTALRALGVSRKRLSLSVMMVIGMGTGLMAL 137 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS-----KYNPNNTLQ 171 + + P ++ L A A+ + + F+ + ++++ + + + Sbjct: 138 TGETLGPWAQAQADILKASAKYKSDMTGARYSGFWAREGEVFLNARSGEEKRLDSGGIM- 196 Query: 172 GIFIVDSR----DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 + + D R ++ ++ + IL +V R + + + F S Sbjct: 197 -LILHDVRLYQLAADGRLQSMTRAARVEHHQDVWILQ--QVQRDTFSERGVQRETFHSLP 253 Query: 228 LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPEL---LETYRSEFHKRLTQWLFPVI 284 ++ ++ A +NLS ++ + YR + ++ R W +P+ Sbjct: 254 WRSRLDPAALAAGLAKPRNLS--VHELVQSIEYRRRNHLDARDFEGQYWSR---WFYPIN 308 Query: 285 FGLISIVAAD-KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ--NPYYIPILYL 341 + + A L+R F+ + + FW +I Y L Sbjct: 309 VLALCLAAIPFSFGLLRSGGMGKRTFLGILFALS-FWMLQMFFERIASVLKLNYQIFYLL 367 Query: 342 FLFCISSIFLLMIKKKY 358 + + ++++ Sbjct: 368 PPMVMLCGSYWLFRRQH 384 >gi|282860071|ref|ZP_06269152.1| putative membrane protein [Prevotella bivia JCVIHMP010] gi|282587159|gb|EFB92383.1| putative membrane protein [Prevotella bivia JCVIHMP010] Length = 405 Score = 87.7 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 45/302 (14%), Positives = 110/302 (36%), Gaps = 6/302 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 + + + YI++ +++ + L I+ IA V + ++ + I+ IP Sbjct: 45 IGTLDWYIIKKFIGTYIFAILLIISIAIVFDFNENLSKFTQYHAPWRAIIFDYYANFIPY 104 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + G S L++P + IL+S+ F + Sbjct: 105 YSNLFSPLFVFIAVIFFTSKLAGNSEVIAMLAAGVSFKRLMRPYMISCILISVLTFYLNS 164 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP---NNTLQGIFIV 176 + P + I+Q + EN+ ++ + I Y+ + Sbjct: 165 FVIPHG-TVIRQNFESLYRNNKKNTSAENVQLQVAKNTVAYIQHYDDHYKRGYGFSLVKF 223 Query: 177 DSRDTQTHKIYY-AQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 +++ +H Q ++ + +++ ++ + + I+ K L E + Sbjct: 224 ENKKIVSHMTAMEIQYDTVADTKYHWKVSNYKIRILRGLKEHITTGTEKDTMLLMEPTDL 283 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + LLN + + Y EFHKR+ I +I + + + Sbjct: 284 VYSKGQQETFTSPELLNYISKQTSRGASNVVQYEIEFHKRIAMSFSAFILTIIGLSLSAR 343 Query: 296 RA 297 + Sbjct: 344 KR 345 >gi|325267812|ref|ZP_08134462.1| YjgP/YjgQ family permease [Kingella denitrificans ATCC 33394] gi|324980693|gb|EGC16355.1| YjgP/YjgQ family permease [Kingella denitrificans ATCC 33394] Length = 353 Score = 87.7 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 46/361 (12%), Positives = 124/361 (34%), Gaps = 11/361 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTE-SLNILLKISGYLIPT 59 MK Y+ I R +MS ++ + + + ++ + + ++ + P Sbjct: 1 MKLLSRYL---IIRLTVMSAYALLALLALYNFIDLLSEKTGIGNYTFWHAVQFTLLQTPA 57 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ P + L+ ++ N+EL ++ +G I ++ + + ++ + Sbjct: 58 RAYLLMPLATLIGGLLALSQLSSNSELAVMKTSGWHISRFIGTIVQFSFIFAVITVLLGE 117 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI-VDS 178 I P+ S + + A+ S ++ + D + I P+ TL I I + Sbjct: 118 WIAPQLSSYADNMKSTARSGQLSST-RNGVWIK-QPDSMVYIGSMLPDKTLLDISIWHYT 175 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + +A+ + Q L + + + + + + + + T + + Sbjct: 176 PQFRLTEAIHAEKAVMR--DQTWQLQNVQSSKITEERVIVQKQPARDWHMNTTNQLMDVL 233 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD-KRA 297 ++K + S L + Y + +L + ++ L+++ Sbjct: 234 LVKPEQMSFSAL-TQYIGYLKKNNQQTLAYDVAWWNKLVYPVATMVMALVALAFTPVSGR 292 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 K+ + F F + + +L LF ++FL+ ++K Sbjct: 293 NHNLGLKLFGGIGLGLLFFFTGRLFGFSAQLYGVPAFLSAVLPTALFACLAVFLIYRQEK 352 Query: 358 Y 358 Sbjct: 353 R 353 >gi|17547136|ref|NP_520538.1| hypothetical protein RSc2417 [Ralstonia solanacearum GMI1000] gi|17429438|emb|CAD16124.1| putative permease transmembrane protein [Ralstonia solanacearum GMI1000] Length = 401 Score = 87.7 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 49/284 (17%), Positives = 94/284 (33%), Gaps = 29/284 (10%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I F+ ++ + +L + V +L + PT Sbjct: 7 MQVYEKYFARQIYGVFVFILFAVLALFIFFDMLSELGSVVGRYTTLIAFFHVM-LQAPTR 65 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + V + M +E I G + + +A+ L++ ++ Sbjct: 66 VYEVIPVAALISAIYVFSQMASQSEFTIFRVAGLDTRRALLSLFKIALPLALVTYVFGEF 125 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRL-----DDD------LYIKISKYNPNNT 169 I PK +++ +A A S ++ + D ++ + PN T Sbjct: 126 IGPKSEQFAQKVRLEALGATVSSGFRSGVWVKDRGPARPDGSGGEVTRFVNVGTLQPNQT 185 Query: 170 LQGIFIVD-SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 +QG+ I + + + I AQ G H + + ++F + Sbjct: 186 IQGLRIYEFDANYRLSSIRVAQQARY----------QGHQHWELNDVTETRFIEFPRHAG 235 Query: 229 QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEF 272 +S V A D L P+ R + RSE Sbjct: 236 AATPQDSKQAVPGAPD-----ALAPDFRGEQTRL-PKQDMRSEL 273 >gi|302879721|ref|YP_003848285.1| permease YjgP/YjgQ family protein [Gallionella capsiferriformans ES-2] gi|302582510|gb|ADL56521.1| permease YjgP/YjgQ family protein [Gallionella capsiferriformans ES-2] Length = 358 Score = 87.7 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 49/369 (13%), Positives = 124/369 (33%), Gaps = 22/369 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+ R I S + ++ + + + ++ + SL ++ IP Sbjct: 1 MNLLTRYLAREIYASIALVFAALIMLFAFLDFIGQLGTMGYGQYSLGYVVLFVLLTIPGH 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + T L M +EL I +G S ++ + +A+ + + FI + Sbjct: 61 IYELFPVAVLIGTIVALVQMAARSELTIYRASGASTGQMLGALSKIAVPMILLSFICGEL 120 Query: 121 IEPKCRSTIKQLSAKA-QLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 I P ++L KA ++ ++ + DD ++ + P+ +L I I Sbjct: 121 IAPPSERLAQKLRLKALNTQVSLQAFRSGVWVK-DDASFVNVRSVMPDTSLSDIDIYTFD 179 Query: 180 DT-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL------QTES 232 + + + A+ S L G + + + ++ + Sbjct: 180 KSFHMNSVIRAKRASY--------LEPGVWQLHDVLETSFAARGVSTKSMPVREWQSALT 231 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 +++L +Q + L ++ + Y +L ++ ++++ Sbjct: 232 PGILSVMLVVPEQMSALDLYKYASHLKENKQQSARYEIAMWNKLVYPFALLVMMVLALPF 291 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN---PYYIPILYLFLFCISSI 349 A + R +F+ + + + + N P + +F + Sbjct: 292 ASYQR--RAGGVSILVFMGIVLGLVFHFAGRLVGSLGSLNDWQPLFSATAMTGVFLLIGA 349 Query: 350 FLLMIKKKY 358 F+L ++ Sbjct: 350 FMLWRVERR 358 >gi|191169423|ref|ZP_03031162.1| putative permease, YjgP/YjgQ family [Escherichia coli B7A] gi|309794090|ref|ZP_07688515.1| conserved hypothetical protein [Escherichia coli MS 145-7] gi|190900537|gb|EDV60347.1| putative permease, YjgP/YjgQ family [Escherichia coli B7A] gi|308122497|gb|EFO59759.1| conserved hypothetical protein [Escherichia coli MS 145-7] Length = 359 Score = 87.7 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 55/369 (14%), Positives = 130/369 (35%), Gaps = 21/369 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I + G S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSMGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIM--------KFKSYTLQTE 231 YA+S +I D+ IL+ G H+K K+ + F S L+ Sbjct: 181 DLSLESYIYARSATIKDDKT-WILH-GVNHKKWLNGKETLEILDNLAWQSTFTSMNLEEL 238 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S ++ ++ + +++L + YR ++L + + L+++ Sbjct: 239 SMPGNSFSVRQLNHYINYL--------QETGQPSSEYRLALWEKLGHPILTLAMILLAVP 290 Query: 292 AADK--RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 R+ + + + L + + P L + + I Sbjct: 291 FTFSAPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVAALGLPMAFVLAALI 350 Query: 350 FLLMIKKKY 358 + + +++ Sbjct: 351 LVYLFDRQH 359 >gi|254418566|ref|ZP_05032290.1| putative permease, YjgP/YjgQ family [Brevundimonas sp. BAL3] gi|196184743|gb|EDX79719.1| putative permease, YjgP/YjgQ family [Brevundimonas sp. BAL3] Length = 378 Score = 87.7 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 70/368 (19%), Positives = 133/368 (36%), Gaps = 25/368 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSST-ESLNILLKISGYLIPT 59 + E Y+L RS ++ I + +I ++ V S S +L + P+ Sbjct: 16 LGRIERYVLIQQLRSLGVALAVISALVMLIDFVEVSRGVGSDQDLSALRILGLVALKSPS 75 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 V+ + PF F T +NR +EL+ + G S + P +A++L + Sbjct: 76 VIVQLLPFVFLFGTLAAYIGLNRRSELVAMRAAGVSAWRFVLPAAGMALVLGVLTVTVLG 135 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD---LYIKISKYN-PNNTLQGI-- 173 + ++ A+ + + ++ R DD + I+ + + N L + Sbjct: 136 PLASAGDGLWQRERARISGTAPGASSNDAIWLREGDDQRQMIIRAGRQDRANARLLDVTF 195 Query: 174 FIVDSR---DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT 230 FI + + + A+S ++ R + S + + S L + Sbjct: 196 FIYTTDAEGNRDFSERIDARSAALSAGRWRLT-------DAVGASIGQRAVTYSSLDLLS 248 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWL-FPVIFGLIS 289 A+ A Q+ F PN R E + + R Q L P++F +S Sbjct: 249 SLADEEAFERFARPQSTPFWSLPNQ---IKRIEDAGFASTAYRLRFQQLLVTPLVFAAMS 305 Query: 290 -IVAADKRALVRQR--KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFC 345 + AA L+R K+ + L +F FS + E P ++ L L Sbjct: 306 ILAAAFSLRLMRLGDLAKMSVAAVVLGFAFFFLNQFSSAMGSAEVVPPFVAAWLPPILTA 365 Query: 346 ISSIFLLM 353 +++ LL Sbjct: 366 LAAFTLLF 373 >gi|85716330|ref|ZP_01047303.1| permease YjgP/YjgQ [Nitrobacter sp. Nb-311A] gi|85696846|gb|EAQ34731.1| permease YjgP/YjgQ [Nitrobacter sp. Nb-311A] Length = 365 Score = 87.7 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 54/365 (14%), Positives = 128/365 (35%), Gaps = 24/365 (6%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS----STESLNILLKISGYLI 57 + Y + + V I ++ ++ I +V ++ S ++ + S + + Sbjct: 6 NTLGRYFAGRFL---VAALGVFVSIFLLLVLVDYIEMVRRTSGLASASALVVAETSLFRV 62 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 P +L +TPFC + +++R EL++ G S I P L AI+L Sbjct: 63 PQLLEKLTPFCVLIGAMTCYLALSRQLELVVARAAGVSAWQFISPALACAIVLGALATTV 122 Query: 118 ENIIEPKCRSTIKQLSAKAQLALTFSYLEE--NLFFR--LDDDLYIKISKYNPNN--TLQ 171 N + R K++ A+ ++ L++ + DD I + + L Sbjct: 123 YNPLSANLRELSKRMEAELFGGVSGGGLQDASGFWINQVTDDGQAIINAARSEQQGVRLT 182 Query: 172 GIFIV-DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT 230 G+ + + ++ + A+ +++ R L G R + + + F + Sbjct: 183 GLTVFRFNPHSRFEERIEAREAALEDGRW---LFKGVR-RFTLDNPPVEQETFV-LSTSL 237 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 A + L ++ + YR ++HK + Q ++ ++ + Sbjct: 238 TPAQVQNSFSTPETVSFWQLPGYIKSSESSGFATAG-YRLQYHKLIAQPF--LLAAMVML 294 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF-LFCISSI 349 A+ R + + F ++ S + + + PI + C+ + Sbjct: 295 AASVSLRFFRFGGVQKMVLSGVGSGFLLYV-LSKVTEDLSKAELMNPIAAAWLPVCVGGL 353 Query: 350 FLLMI 354 ++ Sbjct: 354 TGFLV 358 >gi|209519257|ref|ZP_03268059.1| permease YjgP/YjgQ family protein [Burkholderia sp. H160] gi|209500337|gb|EEA00391.1| permease YjgP/YjgQ family protein [Burkholderia sp. H160] Length = 382 Score = 87.7 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 53/379 (13%), Positives = 132/379 (34%), Gaps = 28/379 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRIYERYFARQIYLTFVFILFAFSGLFFFFDLINELNSVGHGNYKFQYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + I L I ++ + Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEYTIFRVSGLATNRALRSLLKIGIPLVIVTYLIGEV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRL-----DDD----LYIKISKYNPNNTLQ 171 + P +++ +A + + + ++ + D ++ + + P+ T+ Sbjct: 121 VGPYTDQLSERVRLEALGSSVSTNFQSGVWVKDTLTERADGEQVTRFVNVGELRPDATIS 180 Query: 172 GIFIVD-SRDTQTHKIYYAQSGSIDLDRQAII--LNDGEVHRKSPISKDI---------- 218 + I + + + AQSG ++ + D ++ +P Sbjct: 181 NVRIYEFDSKFRLSNVRIAQSGRYQPPGHWLLTGVTDTQLLDVAPAPGTPADALNPVYRA 240 Query: 219 SIMKFKSYTLQTE-SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLT 277 + + Y+L++E + +++L + D+ F L + + + Y ++L Sbjct: 241 TQVTLPEYSLRSELTPQILSVLLVSPDRMSMFNLFRYIQHLTENHQDTQRYEIALWRKLL 300 Query: 278 QWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI- 336 + ++S+ A I L +SF +F I + P + Sbjct: 301 YPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLFNTLFSHIGTLNTWPAPLT 360 Query: 337 ----PILYLFLFCISSIFL 351 ++YL L + ++ Sbjct: 361 AATPGLVYLVLGLVGLKWV 379 >gi|254251664|ref|ZP_04944982.1| hypothetical protein BDAG_00856 [Burkholderia dolosa AUO158] gi|124894273|gb|EAY68153.1| hypothetical protein BDAG_00856 [Burkholderia dolosa AUO158] Length = 382 Score = 87.7 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 50/381 (13%), Positives = 118/381 (30%), Gaps = 29/381 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRLYEKYFARQIYVTFVFILFAFSGLFFFFDLISELNSVGHGNYKFGYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + + L I ++ Sbjct: 61 FYEIIPVATLISAIYVFAQMAANSEFTIFRVSGLATNQALRSLLKIGVPLVIVTYLIGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRL-----DDD----LYIKISKYNPNNTLQ 171 + P +++ +A A S + ++ + ++ ++ + +P++T+ Sbjct: 121 VGPYADQLSERVRLQALGASVSSNFQSGVWVKDTLAARENGEHVTRFVNVGSPSPDSTIS 180 Query: 172 GIFIVD-SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-------------D 217 + I + Q + AQSG + +L +PI Sbjct: 181 NVRIYEFDSKFQLRNVRIAQSGRYEP-PGHWLLTGVTETELTPIKPVAGQPADALSPVYR 239 Query: 218 ISIMKFKSYTL--QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKR 275 + Y L S +++ ++ L + + + Y ++ Sbjct: 240 SQQVTLPEYRLRSDLTPQILSVLLVSPERMSIVNLFR-YIQHLRENQQDTQRYDIALWRK 298 Query: 276 LTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY 335 L + ++S+ A R +F + + + H N + Sbjct: 299 LLYPFAVFVMLVLSLPFA--YLHTRAGVVGVKVFGGIMLGMSFQLLNTLFSHIGTLNTWP 356 Query: 336 IPILYLFLFCISSIFLLMIKK 356 P+ I L K Sbjct: 357 APLTAATPGLIYLALGLFALK 377 >gi|86142618|ref|ZP_01061057.1| hypothetical protein MED217_06881 [Leeuwenhoekiella blandensis MED217] gi|85830650|gb|EAQ49108.1| hypothetical protein MED217_06881 [Leeuwenhoekiella blandensis MED217] Length = 514 Score = 87.7 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 36/236 (15%), Positives = 84/236 (35%), Gaps = 17/236 (7%) Query: 24 VFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRN 83 +FI + + I ++ L I++K Y P ++ +V P + + + N Sbjct: 1 MFIFVLQTVWLYIKELAGKDLDLVIIVKFLLYFSPRLVTLVLPLTVLLTSIMTFGNFAEN 60 Query: 84 TELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFS 143 E + +TG S ++ + + L++ F+ N + P L Sbjct: 61 YEFAAMKSTGISLQRAMRSLTVFILGLAVTSFLFANYVIPAAEFESLNLRRNIAQVKPAM 120 Query: 144 YLEENLFFRLDDDLYIKISKY--NPNNTLQGIFIV--DSRDTQTHKIYYAQSGSIDLDRQ 199 + + + + +D +K++ L+ + I D + + A+ G + Sbjct: 121 AITKGQYNTIGEDYVMKVADKQGEKGQFLKDVIIYQKDPSRVGNYTVIKAREGELISAEG 180 Query: 200 ----AIILNDGEVHRKSPISKDISIMK--------FKSYTLQTESANSSTIVLKAN 243 ++ L DG + KD K F++YT+ + + + ++ Sbjct: 181 DNVLSLKLIDGNYYD-EVEQKDFRKQKREPFVKSYFETYTINIDLSELDNVDMEEK 235 Score = 36.1 bits (82), Expect = 8.7, Method: Composition-based stats. Identities = 14/104 (13%), Positives = 35/104 (33%), Gaps = 4/104 (3%) Query: 257 NPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISF 316 + + + L Y H++ +I V A A++R+ PI I + + Sbjct: 333 DNGIKVKTLSKYEIALHEKFVLAFGCIILF---FVGAPLGAIIRKGGLGLPIVIGVVLFL 389 Query: 317 GVFWGFSYIIHKIEQ-NPYYIPILYLFLFCISSIFLLMIKKKYT 359 + + + E + +L + + + + + T Sbjct: 390 TYHFIGIFAKNSAEDGSVAAWLASWLSTLILFPLGVYLTYRATT 433 >gi|320451335|ref|YP_004203431.1| hypothetical protein TSC_c22800 [Thermus scotoductus SA-01] gi|320151504|gb|ADW22882.1| hypothetical membrane spanning protein [Thermus scotoductus SA-01] Length = 347 Score = 87.3 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 50/342 (14%), Positives = 110/342 (32%), Gaps = 14/342 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ + Y+LR + F + IV + + + + + + LL Y P Sbjct: 1 MKTLDRYLLREVLAHFSLGLAVIVLLFLAGAVYEVLAPLVAKGADPYTLLLYLFYRTPEA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + +L+ + ++EL + G R ++ P+L L LL++ F+ Sbjct: 61 LVRGAPVAYLFALLFLLSRLGEDSELKALLALGIRRERVLLPLLGLGALLALLGFLLGES 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + PK + + L + L + L F+ + + + + I R Sbjct: 121 LVPKALAQGQDLLRRQVLERPRALLTPGTTFQDARGRVVYVGEVARDR------IGKLRI 174 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ A+ G + + G ++ +F+ L Sbjct: 175 LSQEEVVLAEEGRFQGG--VLQVEKGLRVTYEGDRPR-TLTRFQEGELVLRDLTFEPWQN 231 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 AN L L + +++R + ++F L A A Sbjct: 232 PANRMTLKEL-KEEVERLRKSGVKAGLEATTYYRRYAEPAASLVFAL----FATGLAFYL 286 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 + +++ ++ + + + PIL + Sbjct: 287 LGGSRSLGLVGVAVLTFFYYATWSVGRIMGEQNALDPILAAW 328 >gi|71275897|ref|ZP_00652180.1| permease YjgP/YjgQ [Xylella fastidiosa Dixon] gi|170729352|ref|YP_001774785.1| hypothetical protein Xfasm12_0116 [Xylella fastidiosa M12] gi|71163274|gb|EAO12993.1| permease YjgP/YjgQ [Xylella fastidiosa Dixon] gi|167964145|gb|ACA11155.1| conserved hypothetical protein [Xylella fastidiosa M12] Length = 368 Score = 87.3 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 51/377 (13%), Positives = 129/377 (34%), Gaps = 29/377 (7%) Query: 1 MKSF----ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYL 56 MK F + Y+ R + + L++ L ++ + V + + + S + Y Sbjct: 1 MKLFPCLHDRYVARAVVATVLLTWLVLLGLDVVNGFASEVRDIGKGSYSFGHAIAYIAYT 60 Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 +P + P + L + +EL + G SR L V+ + + + + + Sbjct: 61 VPRRAYTLFPTAAVIGMLLGLGQLAATSELTALRALGVSRKRLSLSVMMVIGMGTGLMAL 120 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS-----KYNPNNTLQ 171 + + P ++ L A A+ + + F+ + ++++ + + + Sbjct: 121 TGETLGPWAQAQADILKASAKYKSDMTGARYSGFWAREGEVFLNARSGEEKRLDSGGIM- 179 Query: 172 GIFIVDSR----DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 + + D R ++ ++ + IL +V R + + + F S Sbjct: 180 -LILHDVRLYQLAADGRLQSMTRAARVEHHQDVWILQ--QVQRDTFSERGVQRETFHSLP 236 Query: 228 LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPEL---LETYRSEFHKRLTQWLFPVI 284 ++ ++ A +NLS ++ + YR + ++ R W +P+ Sbjct: 237 WRSRLDPAALAAGLAKPRNLS--VHELVQSIEYRRRNHLDARDFEGQYWSR---WFYPIN 291 Query: 285 FGLISIVAAD-KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ--NPYYIPILYL 341 + + A L+R F+ + + FW +I Y L Sbjct: 292 VLALCLAAIPFSFGLLRSGGMGKRTFLGILFALS-FWMLQMFFERIASVLKLNYQIFYLL 350 Query: 342 FLFCISSIFLLMIKKKY 358 + + ++++ Sbjct: 351 PPMVMLCGSYWLFRRQH 367 >gi|86749599|ref|YP_486095.1| permease YjgP/YjgQ [Rhodopseudomonas palustris HaA2] gi|86572627|gb|ABD07184.1| permease YjgP/YjgQ [Rhodopseudomonas palustris HaA2] Length = 361 Score = 87.3 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 49/359 (13%), Positives = 113/359 (31%), Gaps = 14/359 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + Y S L + + + + + + S ++ + S + +P + Sbjct: 3 LNTLGRYFAARFVSSALGVFFGLFVLLVFVDYIDLLRRAGGLSVSAFVIAQASFFRVPQL 62 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + PFC + +++R EL+I G S I P L+ A+ L +F N Sbjct: 63 LERLLPFCILIGGMTCYLALSRRLELVIARAAGLSAWQFIAPALWSALALGVFASAVFNP 122 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF----FRLDDDLYIKISKYNPNN-TLQGIFI 175 + + KQ+ A+ + S + N F + I ++ L GI + Sbjct: 123 MSAYMQERAKQMEAELFGQGSGSLQDANGFWMNQVSPEGQSIINAARSQQQGAVLSGISV 182 Query: 176 V-DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 D Q A+ ++ +L D + ++ + + A Sbjct: 183 FRFEPDFQFKDRIEAREAVLEPG--YWLLKDVRKYTLDSAPEEQATL---RLPTALTLAQ 237 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + L + + + YR ++HK L + ++ ++ + A+ Sbjct: 238 VRNSFATPESVSFWQLPSYIKASESSGFATAG-YRLQYHKLLAKPF--LLAAMVMLAASV 294 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 R + + F ++ + + C+ + + Sbjct: 295 SLRFFRFGGVQKMVLSGVGAGFLLYILSKVTEDLSKAELMHPLAAAWLPVCVGGLAGFL 353 >gi|115352568|ref|YP_774407.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria AMMD] gi|172061427|ref|YP_001809079.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria MC40-6] gi|115282556|gb|ABI88073.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria AMMD] gi|171993944|gb|ACB64863.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria MC40-6] Length = 382 Score = 87.3 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 51/381 (13%), Positives = 116/381 (30%), Gaps = 29/381 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRLYEKYFARQIYVTFIFILFAFSGLFFFFDLISELNSVGHGNYKFGYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + I L I ++ Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLLKIGIPLVIITYLIGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF-------FRLDDDLY--IKISKYNPNNTLQ 171 + P +++ +A A S + ++ + + + + +P++T+ Sbjct: 121 VGPYADQLSERVRLQALGASVSSNFQSGVWVKDTLAARENGEQVTRFVNVGNLSPDSTIS 180 Query: 172 GIFIVD-SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-------------D 217 + I + Q + AQ+G + +L +PI Sbjct: 181 NVRIYEFDSKFQLQNVRIAQTGRYEP-PGHWLLTGVTETELTPIKPISGAPADALNPVYR 239 Query: 218 ISIMKFKSYTL--QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKR 275 + Y L S +++ +L L + + + Y ++ Sbjct: 240 SQQVTLPEYRLRSDLTPQILSVLLVSPERMSLINLFR-YIQHLRENQQDTQRYDIALWRK 298 Query: 276 LTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY 335 L + ++S+ A R +F + + + H N + Sbjct: 299 LLYPFAVFVMLVLSLPFA--YLHTRAGVVGVKVFGGIMLGMSFQLLNTLFSHIGTLNTWP 356 Query: 336 IPILYLFLFCISSIFLLMIKK 356 P+ I L K Sbjct: 357 APLTAATPGLIYLALGLFALK 377 >gi|171316729|ref|ZP_02905941.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria MEX-5] gi|171098079|gb|EDT42894.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria MEX-5] Length = 382 Score = 87.3 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 50/380 (13%), Positives = 122/380 (32%), Gaps = 27/380 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRLYEKYFARQIYVTFVFILFAFSGLFFFFDLISELNSVGHGNYKFGYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + I L I ++ Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLLKIGIPLVIITYLIGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFR-------LDDDLY--IKISKYNPNNTLQ 171 + P +++ +A A S + ++ + + + + + +P++T+ Sbjct: 121 VGPYADQLSERVRLQALGASVSSNFQSGVWVKDTLAAHENGEQVTRFVNVGNLSPDSTIS 180 Query: 172 GIFIVD-SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-------------D 217 + I + Q + AQ+G + +L +PI Sbjct: 181 NVRIYEFDSKFQLQNVRIAQTGRYEP-PGHWLLTGVTETELTPIKPISGAPADALNPVYR 239 Query: 218 ISIMKFKSYTLQTE-SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRL 276 + Y L+++ + +++L + ++ L + + + Y ++L Sbjct: 240 SQQVTLPEYRLRSDLTPQILSVLLVSPERMSIINLFRYIQHLRENQQDTQRYDIALWRKL 299 Query: 277 TQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 + ++S+ A R +F + + + H N + Sbjct: 300 LYPFAVFVMLVLSLPFA--YLHTRAGVVGVKVFGGIMLGMSFQLLNTLFSHIGTLNTWPA 357 Query: 337 PILYLFLFCISSIFLLMIKK 356 P+ I L K Sbjct: 358 PLTAATPGLIYLALGLFALK 377 >gi|325527103|gb|EGD04518.1| putative permease [Burkholderia sp. TJI49] Length = 382 Score = 87.3 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 50/380 (13%), Positives = 121/380 (31%), Gaps = 27/380 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRLYEKYFARQIYVTFVFILFAFSGLFFFFDLISELNSVGHGNYKFGYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + + L I ++ Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLLKIGVPLVIVTYLIGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF-------FRLDDDLY--IKISKYNPNNTLQ 171 + P +++ +A A S + ++ + + + + +P++T+ Sbjct: 121 VGPYADQLSERVRLQALGASVSSNFQSGVWVKDTLAARENGEQVTRFVNVGSLSPDSTIS 180 Query: 172 GIFIVD-SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-------------D 217 + I + Q + AQ GS + +L +PI Sbjct: 181 NVRIYEFDSKFQLQNVRIAQKGSYEP-PGHWLLKGVTETELTPIKPIAGQPADALNPVYR 239 Query: 218 ISIMKFKSYTLQTE-SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRL 276 + Y L+++ + +++L + ++ L + + + Y ++L Sbjct: 240 SQQVTLPEYRLRSDLTPQILSVLLVSPERMSIINLFRYIQHLRENQQDTQRYDIALWRKL 299 Query: 277 TQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 + ++S+ A R +F + + + H N + Sbjct: 300 LYPFAVFVMLVLSLPFA--YLHTRAGVVGVKVFGGIMLGMSFQLLNTLFSHIGTLNTWPA 357 Query: 337 PILYLFLFCISSIFLLMIKK 356 P+ I L K Sbjct: 358 PLTAATPGLIYLALGLFALK 377 >gi|332286756|ref|YP_004418667.1| hypothetical protein PT7_3503 [Pusillimonas sp. T7-7] gi|330430709|gb|AEC22043.1| hypothetical protein PT7_3503 [Pusillimonas sp. T7-7] Length = 392 Score = 87.3 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 51/348 (14%), Positives = 129/348 (37%), Gaps = 29/348 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M++ Y+ + I RS ++ + ++ + +++ ++ +S+ +L L + +PT Sbjct: 1 MRTARRYLAKEIYRSTIVVLMALIGLFTFFALIEELDNLSNQ-FTLLNLFYMQALALPTT 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L + + EL+I+ +G S + L+ + + I L F+ I Sbjct: 60 LYDLLPIGLLIGAILALAGLAQRNELVILRVSGVSGMKLLTMLWIVTIPLVFGAFLLSEI 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD----LYIKISKYNPNNTLQGIFIV 176 I P + S L +F+ D+ I I + + + I + Sbjct: 120 ITPAAEIKSSEASLTLLGKAGGGRLNSGYWFKESDEQGGTRIINIGQLKSSGNVADITLY 179 Query: 177 DSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + ++ Q + A+ G ++L G+V + S + +S + + T Sbjct: 180 EFKNGQELATFSTAKQGQFADG--TLVL--GDVKQTSINADSLSTLA-NAVQPDTPLTRL 234 Query: 236 STIVLK------ANDQNLSFLLNPNPNNPNYRPELLETY----------RSEFHKRLTQW 279 T+ + ++ ++ +L P + + ++ +++ Sbjct: 235 ETLPERTLKTSLTPERLIARILTPERMSIRVLLDYIDYLENNNLQTDRQIVALWRKMAYP 294 Query: 280 LFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH 327 ++ +I+I A R+ +F+ + + G F ++ Sbjct: 295 FTLLV--MITIAAPISFMQTRRGGVGSKVFVGILLGVGFFMLNQLALN 340 >gi|307294586|ref|ZP_07574428.1| permease YjgP/YjgQ family protein [Sphingobium chlorophenolicum L-1] gi|306879060|gb|EFN10278.1| permease YjgP/YjgQ family protein [Sphingobium chlorophenolicum L-1] Length = 367 Score = 87.3 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 121/357 (33%), Gaps = 11/357 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRI-NLVSSSTESLNILLKISGYLIPTV 60 + Y+ R +V + + +L ++++ + L P + Sbjct: 10 RQISWYMARLFLTRTFAVLAMLVAVLQTLDLLGESGDILAYAGNGDAQLWHYVALRAPQI 69 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + PF + T +L S+N+N+E++ + G S ++ P+L A+ +++ + Sbjct: 70 VARFLPFSVLLGTLIMLASLNQNSEIISMKAAGLSAHQILAPLLAAALGVALISYAFNER 129 Query: 121 IEPKCRSTIKQLSAKAQLAL-TFSYLEENLFFRLDDDLYI--KISKYNPNNTLQGIFIVD 177 I + + + A L + ++ + + R ++L ++ L+ + I + Sbjct: 130 IVARSTARLSAWQAVDYGPLPPETGVKASPWVRDGNNLVTAAIVAGRGTAVQLRKVEIFN 189 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + I A G D ++ +L E + + + + Sbjct: 190 RVNNMLTTIVQAPKGHYDPVAKSWVLE--EARQFDVARGTERQVGTVRFGRDIRPDQFTL 247 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + S L + +L+ L ++ ++ VAA A Sbjct: 248 AKVDPDALTFSQL-QAAIGDLRDAGRPTSELEGSLWHKLSGPLSALLMPILGSVAAFGLA 306 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP----YYIPILYLFLFCISSIF 350 Q + ++L ++ V FS + + P + P L L + +F Sbjct: 307 RSGQLFVRAVMGMALGFAYFVADNFSLAMGNLGAYPPFLAAWAPFLLFLLVGETVLF 363 >gi|107023406|ref|YP_621733.1| permease YjgP/YjgQ [Burkholderia cenocepacia AU 1054] gi|105893595|gb|ABF76760.1| permease YjgP/YjgQ [Burkholderia cenocepacia AU 1054] Length = 382 Score = 87.3 bits (215), Expect = 4e-15, Method: Composition-based stats. Identities = 49/381 (12%), Positives = 116/381 (30%), Gaps = 29/381 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRLYEKYFARQIYITFVFILFAFSGLFFFFDLISELNSVGHGNYKFGYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + + L I ++ Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLLKIGVPLVIVTYLIGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF-------FRLDDDLY--IKISKYNPNNTLQ 171 + P +++ +A A S + ++ + + + + +P++T+ Sbjct: 121 VGPYADQLSERVRLQALGASVSSNFQSGVWVKDTLAARENGEQVTRFVNVGSLSPDSTIS 180 Query: 172 GIFIVD-SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-------------D 217 + I + Q + AQ+G + +L +PI Sbjct: 181 NVRIYEFDSKFQLQNVRIAQTGRYEP-PGHWLLKGVTETELTPIKPITGQPADALNPVYR 239 Query: 218 ISIMKFKSYTL--QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKR 275 + Y L S +++ ++ L + + + Y ++ Sbjct: 240 SQQVSLPEYRLHSDLTPQILSVLLVSPERMSIINLFR-YIQHLRENQQDTQRYDIALWRK 298 Query: 276 LTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY 335 L + ++S+ A R +F + + + H N + Sbjct: 299 LLYPFAVFVMLVLSLPFA--YLHTRAGVVGVKVFGGIMLGMSFQLLNTLFSHIGTLNTWP 356 Query: 336 IPILYLFLFCISSIFLLMIKK 356 P+ I L K Sbjct: 357 APLTAATPGLIYLALGLFALK 377 >gi|295675784|ref|YP_003604308.1| permease YjgP/YjgQ family protein [Burkholderia sp. CCGE1002] gi|295435627|gb|ADG14797.1| permease YjgP/YjgQ family protein [Burkholderia sp. CCGE1002] Length = 382 Score = 87.3 bits (215), Expect = 4e-15, Method: Composition-based stats. Identities = 55/379 (14%), Positives = 130/379 (34%), Gaps = 28/379 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRIYERYFARQIYLTFVFILFAFSGLFFFFDLINELNSVGHGNYKFQYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + + L I ++ + Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEYTIFRVSGLATNRALRSLLKIGVPLVIVTYLIGEV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRL-----DDD----LYIKISKYNPNNTLQ 171 + P +++ +A + S + ++ + D ++ + + P+ T+ Sbjct: 121 VGPYTDQLSERVRLEALGSSVSSNFQSGVWVKDTLTERADGEQVTRFVNVGELRPDATIS 180 Query: 172 GIFIVD-SRDTQTHKIYYAQSGSIDLDRQAII-------LNDGEVHRKSPISK-----DI 218 + I + + I AQSG ++ L D +P Sbjct: 181 NVRIYEFDSKFRLSNIRIAQSGRYQPPGHWLLTGVTDTQLLDVARAPGTPADALNPVYRA 240 Query: 219 SIMKFKSYTLQTE-SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLT 277 + + Y+L++E + +++L + D+ F L + + + Y K++ Sbjct: 241 NQVTLPEYSLRSELTPQILSVLLVSPDRMSMFNLFRYIQHLTENHQDTQRYEIALWKKVL 300 Query: 278 QWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI- 336 + ++S+ A I L +SF +F I + P + Sbjct: 301 YPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLFNTLFSHIGTLNTWPAPLT 360 Query: 337 ----PILYLFLFCISSIFL 351 ++YL L + ++ Sbjct: 361 AATPGLIYLVLGLVGLKWV 379 >gi|78067268|ref|YP_370037.1| YjgP/YjgQ like transporter [Burkholderia sp. 383] gi|77968013|gb|ABB09393.1| YjgP/YjgQ like transporter [Burkholderia sp. 383] Length = 382 Score = 87.3 bits (215), Expect = 4e-15, Method: Composition-based stats. Identities = 49/380 (12%), Positives = 121/380 (31%), Gaps = 27/380 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRLYEKYFARQIYVTFVFILFAFSGLFFFFDLISELNSVGHGNYKFGYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + + L I ++ Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLLKIGVPLVIITYLIGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF-------FRLDDDLY--IKISKYNPNNTLQ 171 + P +++ +A A S + ++ + + + + +P++T+ Sbjct: 121 VGPYADQLSERVRLQALGASVSSNFQSGVWVKDTLAARENGEQVTRFVNVGSLSPDSTIS 180 Query: 172 GIFIVD-SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-------------D 217 + I + Q + AQ+G + +L +PI Sbjct: 181 NVRIYEFDSKFQLRNVRIAQTGRYEP-PGHWLLKGVTETELTPIKPISGQPADALNPVYR 239 Query: 218 ISIMKFKSYTLQTE-SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRL 276 + Y L+++ + +++L + ++ L + + + Y ++L Sbjct: 240 SQQVSLPEYRLRSDLTPQILSVLLVSPERMSIINLFRYIQHLRENQQDTQRYDIALWRKL 299 Query: 277 TQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 + ++S+ A R +F + + + H N + Sbjct: 300 LYPFAVFVMLVLSLPFA--YLHTRAGVVGVKVFGGIMLGMSFQLLNTLFSHIGTLNTWPA 357 Query: 337 PILYLFLFCISSIFLLMIKK 356 P+ I L K Sbjct: 358 PLTAATPGLIYLALGLFALK 377 >gi|32473921|ref|NP_866915.1| permease [Rhodopirellula baltica SH 1] gi|32444458|emb|CAD74456.1| conserved hypothetical protein-putative permease [Rhodopirellula baltica SH 1] gi|327542994|gb|EGF29442.1| permease YjgP/YjgQ family protein [Rhodopirellula baltica WH47] Length = 398 Score = 87.3 bits (215), Expect = 4e-15, Method: Composition-based stats. Identities = 53/397 (13%), Positives = 125/397 (31%), Gaps = 48/397 (12%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 IL I R F+++ + + + +I + + + +L++ + IP L Sbjct: 4 TRLTRTILFEILRIFVVALVVLTLLILLIAVGR---ELFRKGLGAMAVLQLLPFAIPISL 60 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P V M + E+ + +G S + L++P + A LLS ++ Sbjct: 61 QHAVPATALFSVCCVYGRMAADGEISTVKASGISPLRLLQPAIVFAALLSPVAVYCSDMA 120 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 + +K++ + + + LE + + D I + + + + + Sbjct: 121 VSWGKPGVKRVVLLSIEDIAYRLLERDHSYTSDHGFSIHVREID-GRRMISPRVTVRGKG 179 Query: 182 QTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDIS-IMKF--------KSYTL 228 A G + +D ++ + L D +V R + D +F + + Sbjct: 180 DDAFTVTASEGQLMMDEESLSLVLKLVDSQVIRGKGLQGDFYGEHQFEIPIGNALEETDV 239 Query: 229 QTESANSSTIVLKANDQNLSF-----------------LLNPNPN------------NPN 259 T S + + L N++ LL P + Sbjct: 240 STRSPSELPLRLIRNERLRQRERTHAKIGELAAFTGFSLLTSRPAEIGGEKSSAIQSSLQ 299 Query: 260 YRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVF 319 L ++E +R + F L+ A F L + Sbjct: 300 SSRHRLTRLQTEPWRRWAEGFTCFFFVLVGAPLAIVAKTSDYWTTFGMCF--LPTILVYY 357 Query: 320 WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + + + +++ +S + +++I + Sbjct: 358 PLYLLGLDQAKAGDMPPYGVWIGNVVLSGVGMMLIAR 394 >gi|167585748|ref|ZP_02378136.1| permease YjgP/YjgQ family protein [Burkholderia ubonensis Bu] Length = 382 Score = 87.3 bits (215), Expect = 4e-15, Method: Composition-based stats. Identities = 48/363 (13%), Positives = 115/363 (31%), Gaps = 29/363 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ FE Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRLFEKYFARQIYVTFVFILFAFSGLFFFFDLISELNSVGHGNYKFGYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + + L I ++ Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLLKIGVPLVIVTYLIGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLD----DD-----LYIKISKYNPNNTLQ 171 + P +++ +A A S + ++ + D+ ++ + +P++T+ Sbjct: 121 VGPYADQLSERVRLQALGASVSSNFQSGVWVKDTLAARDNGEQVTRFVNVGSLSPDSTIS 180 Query: 172 GIFIVD-SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-------------D 217 + I + Q + AQ+G + +L +PI Sbjct: 181 NVRIYEFDSKFQLQNVRIAQTGRYEA-PGHWLLTGVTETELTPIKPIGGQPADALNPVYR 239 Query: 218 ISIMKFKSYTL--QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKR 275 + + L S +++ +L L + + + Y ++ Sbjct: 240 SQQVTLPEFRLRSDLTPQILSVLLVSPERMSLINLFR-YIQHLKENQQDTQRYDIALWRK 298 Query: 276 LTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY 335 L + ++S+ A R +F + + + H N + Sbjct: 299 LLYPFAVFVMLVLSLPFA--YLHTRAGVVGVKVFGGIMLGMSFQLLNTLFSHIGTLNTWP 356 Query: 336 IPI 338 P+ Sbjct: 357 APL 359 >gi|83594405|ref|YP_428157.1| permease YjgP/YjgQ [Rhodospirillum rubrum ATCC 11170] gi|83577319|gb|ABC23870.1| permease YjgP/YjgQ [Rhodospirillum rubrum ATCC 11170] Length = 366 Score = 86.9 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 48/331 (14%), Positives = 114/331 (34%), Gaps = 24/331 (7%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 ++ YI R + + + L + + + +++ S ++++L+++ Y +P L Sbjct: 5 RTLTTYIARTYLTALVGATLVVGALLMLFDVIEITRRSGSKAIGIDVVLEMALYHLPMSL 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PF F + + R++EL++I G S + PV+ + ++L I N + Sbjct: 65 QSALPFVFMGGAVMIFWKLARSSELVVIRAAGLSVWQFLAPVIAVVVVLGIANVTLLNPL 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSY--------LEENLFFRLDDDLYIK---ISKYNPNNTL 170 + +++ A + L EN + + + + + + + Sbjct: 125 AAHLYTKYERMDAGMDSGVANPLALSDGGLWLREN---NPEGQVVMHAQGVRQVDNALRM 181 Query: 171 QGIFIV-DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ 229 G+ I D + A++ + A++L + + ++ S Sbjct: 182 TGVTIFRYGPDRRFESRIDAETAGLREG--ALVLTSVVTTYPGRVGERAETLEVPS---N 236 Query: 230 TESANSSTIVLKANDQNLSFLLNPNPNNPNYRPEL-LETYRSEFHKRLTQWLFPVIFGLI 288 + L P +R +H + L + L+ Sbjct: 237 LTLPKIQDSFSPPETVSFWEL--PAFITFFEAAGFSAHAHRLHWHSLIASPLLLIAMVLM 294 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVF 319 V + K + R + I +++ FGVF Sbjct: 295 GAVFSLKPSQ-RSVNWLFRIVGAVAAGFGVF 324 >gi|315500013|ref|YP_004088816.1| permease yjgp/yjgq family protein [Asticcacaulis excentricus CB 48] gi|315418025|gb|ADU14665.1| permease YjgP/YjgQ family protein [Asticcacaulis excentricus CB 48] Length = 379 Score = 86.9 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 49/368 (13%), Positives = 116/368 (31%), Gaps = 31/368 (8%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSST-ESLNILLKISGYLIPTVL 61 YI+ + + + + I ++I ++ + S ++ + P ++ Sbjct: 21 RLTTYIITRCLMAIGTALVVVSSIIFLIDYVEISKSLGQRGDLSSLQIVGLLMLKSPNII 80 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 ++ PF F T + +NR +EL+ + G S + P +A +L ++ Sbjct: 81 LVLLPFAFLFGTLSAFVGLNRRSELIAMRAAGMSAWRFVLPAAGMAAILGALT---VTVL 137 Query: 122 EPKC--------RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQG- 172 P R +Q + + YL + I + + + L Sbjct: 138 SPAATVLADQYDRFAAQQSQSDTRAKTGEIYLRQG---DGKQQTVIHAREQSEDGRLIDA 194 Query: 173 -IFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSP--ISKDISIMKFKSYTLQ 229 + + + + +D +L G KS + + + + ++ Sbjct: 195 SFWTFSLDEAEIPRFLT------RIDASEAVLRPGTWQLKSARVSKPGETTLYYNTLSIG 248 Query: 230 TESANSSTIVLKANDQNLSFLLNP-NPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 + + A Q+ +F P Y ++ L L + + Sbjct: 249 SNLSPERAFNRFAAPQSTNFWQLPGTIAQIESSGFSAAGYVLRLNQLLATPL--MFAAMT 306 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWG--FSYIIHKIEQNPYYIPILYLFLFCI 346 ++ AA L+R + + F VF+ + K E P ++ + F Sbjct: 307 ALGAAFSLRLMRIGGLARLTLSGIVLGFMVFFLNQLCGSLGKAEVIPAFLAG-WATPFAA 365 Query: 347 SSIFLLMI 354 + ++ Sbjct: 366 FLTAMTLL 373 >gi|239815706|ref|YP_002944616.1| permease YjgP/YjgQ family protein [Variovorax paradoxus S110] gi|239802283|gb|ACS19350.1| permease YjgP/YjgQ family protein [Variovorax paradoxus S110] Length = 369 Score = 86.9 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 58/377 (15%), Positives = 132/377 (35%), Gaps = 30/377 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVS---SSTESLNILLKISGYLI 57 MK+ I ++ L + + + + + + S L LI Sbjct: 1 MKTIRRLIYVEALKAVAFVTLGFLSLFFFFDFVDELQSIGRPESLAYGPAQALIYVTLLI 60 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 P+ L + P + V+ + +++E I+ +G ++ +L L + F Sbjct: 61 PSHLYELLPITVLIGCIFVMARLAQSSEYTILRTSGLGPWRALRTLLLLGVGFVFLTFAI 120 Query: 118 ENIIEPKCRSTIKQLSAKAQLAL-----TFSYLEENLFFRLDDDLYIKISKYNPNNTLQG 172 + I P T + L ++ Q + T ++L+E R + + + + +L+ Sbjct: 121 GDYIAPASERTGQLLKSRYQGSYSLVGNTGAWLKEK---RENVSYAVNVLSIARDGSLKN 177 Query: 173 IFIVDSRDTQ-THKIYYAQSGSIDLDRQAIILNDGEVHRKSP--ISKDISIMKFKSYTLQ 229 I + K A S I D L+D E+ ++ I+ K L Sbjct: 178 ARIFEFDANGYVRKQLVASSARIFDDH--WQLSDVELQDYETRISAEKARIVTTKVPQLD 235 Query: 230 ----TESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIF 285 S S +L+ + L + + + + Y +F +++ L ++ Sbjct: 236 WPTTLTSEMVSVALLRPDRMGTLDLFD-YIRHLEANGQTAQRYEIQFWRKVFYPLSCLVM 294 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYI----PI 338 ++++ A RQ +F + I F F Y+ + +P+ + Sbjct: 295 VVLALPFA--YLHFRQAGITTYVFGGVMIGISFFLLNNVFGYLGNLSNWSPWLTAAAPGL 352 Query: 339 LYLFLFCISSIFLLMIK 355 +Y + + +L++ + Sbjct: 353 IYSVMSLAAFSWLVLRR 369 >gi|330752041|emb|CBL80552.1| predicted permease YjgP/YjgQ [uncultured Flavobacteria bacterium] Length = 374 Score = 86.9 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 49/332 (14%), Positives = 122/332 (36%), Gaps = 10/332 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + YILR SF ++ + I+ IA V I ++I+ + I+ I Sbjct: 1 MQKLDWYILRKFMGSFFLTMILILAIAIVFDISEKIDDFQNGATMNEIVFDYYINFIAFY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + + T + + N+E++ + +GTS ++P A ++ + ++ Sbjct: 61 GNLFSALILFISTIWFTSRITSNSEVVAVLTSGTSFNRFLRPYFIGATIICLLSLTLNHL 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + + + + ++ Y+ Y+ F + D Sbjct: 121 LVPHTNIK-RIAFEEKYITGVSRPINQKVHRQVLPGHYVYFETYSGQRQSGYQFTYEVFD 179 Query: 181 TQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKS--YTLQTESANSST 237 + A +D L++ + ++ ++ I+ + TL S + Sbjct: 180 SHRLASKLSADFVRLDTATGQWRLDNFRLRTLDSLNNEV-ILTGRRMDTTLAFTSEQIAP 238 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + N + L E + +Y+ E +R + + +F L+++ A Sbjct: 239 KLSSIATMNSNELSRFIEQEEVTGNENIASYQMEMQRRTSYPVSSYVFVLLAVSLA---- 294 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKI 329 ++R+ I I++ + + F+ I + Sbjct: 295 -TQKRRGGLGINIAIGLILCAVYVFAMQISQT 325 >gi|121595376|ref|YP_987272.1| permease [Acidovorax sp. JS42] gi|120607456|gb|ABM43196.1| permease YjgP/YjgQ family protein [Acidovorax sp. JS42] Length = 355 Score = 86.9 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 51/333 (15%), Positives = 110/333 (33%), Gaps = 11/333 (3%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y+ R +G L+ L I + V+++L V + ++ +P L M P Sbjct: 8 YLRRRVGTQILVLLLVITALMQVLELLDVTTDVLKRDQGFIGIVYYGLLRLPAELVMALP 67 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + T L +M RN E+ + G S + L+ +L LA +L++ F+ + + P Sbjct: 68 PAVLLGTLMALANMARNLEIATMRTAGLSMMRLLGYLLPLAAVLAVAQFVLSDHVLPPAE 127 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSRDTQ-TH 184 + +K+ + + + + + +P+ L + + D Sbjct: 128 NGLKEWWS---ASAPADDTPTKRWAHTSGG-TVSMESTSPDGRRLIDVRLYVRDDRGLIQ 183 Query: 185 KIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAND 244 A D + G V+ + + ++ T + L Sbjct: 184 SRLTATEAQWDG---QVWRFKG-VNEFVYGDRRVERIQVAERAWDTNLRPEDVLRLDVAR 239 Query: 245 QNLS-FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 NLS +L + Y+S ++ L + L+++ A Sbjct: 240 PNLSTAMLAEVIAGTRTGTQPHRYYQSVLYRSYAAPLAIFVMLLLALPTAVSLPRGTGGG 299 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 + + L + F + G + + P + Sbjct: 300 SRMAMALILGLGFLLCDGIVAALGLAARWPPLV 332 >gi|182677644|ref|YP_001831790.1| permease YjgP/YjgQ family protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182633527|gb|ACB94301.1| permease YjgP/YjgQ family protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 362 Score = 86.9 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 52/353 (14%), Positives = 106/353 (30%), Gaps = 14/353 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTVL 61 + Y+ L I + +VI +++ + + + +++ +S P+V Sbjct: 6 TLGRYLSSRFLFMILAVFGTIFSMIYVIDLVEMLRRAGNRPGATASLIAFLSFLRAPSVS 65 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PFC T ++ R ELL+ G S L+ P L +A+ + IF N I Sbjct: 66 EQILPFCVLFGTMATFINLTRRLELLVARAAGISIWQLMMPPLGIALAIGIFSVTLYNPI 125 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLF---FRLDDDLYIKISKYNPNN-TLQGIFIVD 177 + + + + + L+ +D I+ L G+ + Sbjct: 126 SAMMKHRADGIETELFGGIGGQETKGGLWIRQNSVDGQAIIRAETVEAGGSRLGGVTLYT 185 Query: 178 -SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 +D A+ + + + R ++I S Sbjct: 186 YGKDGSFEARIEARHAKLVPG--VWQMTEA---RIIVPGEEIQEAGLYLLATNLTPGEVS 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 ++ L + YR +F L + LF + LI+ AA Sbjct: 241 ENIVTPESVPFWELQSFRAATEL-AGLDSTRYRLQFQLLLARPLFFIAMVLIA--AAFSL 297 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 R + F ++ + PI ++S+ Sbjct: 298 RFFRFGGITKMVCGGAGAGFVLYIVSKFTGDLGTSGLLSAPIAAWSPAVVASM 350 >gi|116690488|ref|YP_836111.1| permease YjgP/YjgQ family protein [Burkholderia cenocepacia HI2424] gi|170733809|ref|YP_001765756.1| permease YjgP/YjgQ family protein [Burkholderia cenocepacia MC0-3] gi|116648577|gb|ABK09218.1| permease YjgP/YjgQ family protein [Burkholderia cenocepacia HI2424] gi|169817051|gb|ACA91634.1| permease YjgP/YjgQ family protein [Burkholderia cenocepacia MC0-3] Length = 382 Score = 86.9 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 49/380 (12%), Positives = 121/380 (31%), Gaps = 27/380 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRLYEKYFARQIYITFVFILFAFSGLFFFFDLISELNSVGHGNYKFGYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + + L I ++ Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLLKIGVPLVIVTYLIGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF-------FRLDDDLY--IKISKYNPNNTLQ 171 + P +++ +A A S + ++ + + + + +P++T+ Sbjct: 121 VGPYADQLSERVRLQALGASVSSNFQSGVWVKDTLAARENGEQVTRFVNVGSLSPDSTIS 180 Query: 172 GIFIVD-SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-------------D 217 + I + Q + AQ+G + +L +PI Sbjct: 181 NVRIYEFDSKFQLQNVRIAQTGRYEP-PGHWLLKGVTETELTPIKPITGQPADALNPVYR 239 Query: 218 ISIMKFKSYTLQTE-SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRL 276 + Y L+++ + +++L + ++ L + + + Y ++L Sbjct: 240 SQQVSLPEYRLRSDLTPQILSVLLVSPERMSIINLFRYIQHLRENQQDTQRYDIALWRKL 299 Query: 277 TQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 + ++S+ A R +F + + + H N + Sbjct: 300 LYPFAVFVMLVLSLPFA--YLHTRAGVVGVKVFGGIMLGMSFQLLNTLFSHIGTLNTWPA 357 Query: 337 PILYLFLFCISSIFLLMIKK 356 P+ I L K Sbjct: 358 PLTAATPGLIYLALGLFALK 377 >gi|320335816|ref|YP_004172527.1| permease YjgP/YjgQ family protein [Deinococcus maricopensis DSM 21211] gi|319757105|gb|ADV68862.1| permease YjgP/YjgQ family protein [Deinococcus maricopensis DSM 21211] Length = 371 Score = 86.9 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 48/324 (14%), Positives = 99/324 (30%), Gaps = 18/324 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K Y+LR + +++ L + + I + ++ S + + +P + Sbjct: 25 LKKLAPYVLREVLPLYVVGALVFLLLTTTDLISGVVGILLSYHPTPRQAWLLYVTQVPRL 84 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + +++EL G + L P+L A L+ F+F + Sbjct: 85 LNQSLILAIPFAVLVGFGRLAKDSELKATAAGGVRPLNLAWPLLLPAALIGAFVFYNGAY 144 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN----TLQGIFIV 176 + P+ ++ + + D L+ P L G+ + Sbjct: 145 LTPQAQAQWNTAWFSVYRQAPPPPVTTTYTYAQDGTLFSASRVETPQGATVANLTGVLVQ 204 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + A +GS D + L G V R D +F + + + Sbjct: 205 TPTE-----TITASTGSWDARAKTWTLPGGWVVR-----GDARPAEFHTPRTFPQRDEIA 254 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L L + + TY+ +R + F A+ Sbjct: 255 RPTPPPAESTLPEL-RAELASGRLNVQERRTYQFNIARRYADAFTALGFA---FAASALG 310 Query: 297 ALVRQRKKIHPIFISLSISFGVFW 320 +VR R + L + F + W Sbjct: 311 LMVRNRAWAVTNVVFLILGFYIVW 334 >gi|254521231|ref|ZP_05133286.1| putative YjgP/YjgQ family permease [Stenotrophomonas sp. SKA14] gi|219718822|gb|EED37347.1| putative YjgP/YjgQ family permease [Stenotrophomonas sp. SKA14] Length = 363 Score = 86.9 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 51/366 (13%), Positives = 116/366 (31%), Gaps = 17/366 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+LY+ R + + L++ +V + V+ + + +L Y +P Sbjct: 2 RFDLYLGRTVFTTVLLTWAVLVGLDVVMAFSGEFKDIGKNGYTLGHAAAWVLYTVPRRAY 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + L + +EL + G SR L V LL+ + S + Sbjct: 62 TMFPTAAVIGALMGLGQLAATSELTALRALGLSRRRLSVSVAIALSLLTAVMVFSAETLG 121 Query: 123 PKCRSTIKQLSAKAQ-------LALTFSYLEEN-LFFRLDDDLYIKISKYNPNNTLQGIF 174 P + L A A+ + + E F + L+ + Sbjct: 122 PWGQDRADALKASAKWGRDIATTRYSGLWAREGDTFLSAAGGEEQLVGDKGTRLILRDVR 181 Query: 175 IV-DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 + + D Q I +A + DR +L S + + + + ++ Sbjct: 182 LYRIAEDGQIASITHAATAE--HDRDGWVLTGVRRDTFGERSATRQEVAREPWNSRLDAG 239 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + + K + ++ L + + + R W +P+ + + A Sbjct: 240 ALAAGIAKPRNLRITEL-RASIEYRERNGLDARDFEDIYWSR---WFYPLNVLALCLAAV 295 Query: 294 D-KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY-LFLFCISSIFL 351 +R +F+ + + G + + + I Y L + ++ Sbjct: 296 PFAFGSLRSGGMGKRLFLGILFALGFWLLQLFFGRMAGALKFDYRIAYALPPIVMLAVSG 355 Query: 352 LMIKKK 357 L+ ++K Sbjct: 356 LLFRRK 361 >gi|163746449|ref|ZP_02153807.1| permease YjgP/YjgQ family, putative [Oceanibulbus indolifex HEL-45] gi|161380334|gb|EDQ04745.1| permease YjgP/YjgQ family, putative [Oceanibulbus indolifex HEL-45] Length = 365 Score = 86.9 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 46/365 (12%), Positives = 126/365 (34%), Gaps = 24/365 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y R SF++ + + ++ + + + + +L ++ +P + Sbjct: 2 ILHFYFARRFFTSFMVITAVLAALVMLVDGVDQARRFADDDVGWDQVLGMTLLNMPQTIN 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M+ P + T + + R++E+++ G S + + + +A+++ N I Sbjct: 62 MILPLIMILATVALFIGLARSSEMVVTRAAGRSALRALVAPVVVALIIGTLAVAVLNPIV 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLE--ENLFFR---LDDDLYIKI-SKYNPNNTLQGIFIV 176 +QL+ K + + + E L+ R + I+ + + L + I+ Sbjct: 122 AATSERSEQLTQKYRSNGSSALSVSDEGLWLRQGTEEGQSVIRAWRTNSDASVLYNVTII 181 Query: 177 DSRDTQTH-KIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + + A+S + + G + + TL S+ + Sbjct: 182 SYDAEKGPIRRIEAESAQLSGGDWQLT---GAKIWPLEAGVNAEGAAEEHETLTIPSSLT 238 Query: 236 STIVLKANDQ-------NLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 + ++ + L + + ++E L + F + ++ Sbjct: 239 VERIRESIARVAAVSIYELPEFIRQLEQAGFSTRQHEVWLQAE----LARPFF--LVAMV 292 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 + +A R + S+ + FG+++ S+ + +N L + +++ Sbjct: 293 LVASAFTMRHTRFGGTGVAVLASILLGFGLYFIRSF-AQILGENGQIPVTLAAWAPPVAA 351 Query: 349 IFLLM 353 IFL + Sbjct: 352 IFLAL 356 >gi|145588806|ref|YP_001155403.1| permease YjgP/YjgQ family protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047212|gb|ABP33839.1| permease YjgP/YjgQ family protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 384 Score = 86.9 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 58/378 (15%), Positives = 132/378 (34%), Gaps = 26/378 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 +E Y+ R I +F +V + IL + V +L + L P+ + Sbjct: 8 IYERYLARQIYAAFGFILFALVALFLFFDILSELGSVQGQ-YTLALALLHVLLKAPSRIS 66 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + + V + +E I+ G + + +++ L + + Sbjct: 67 EIIPIAGLIGSIYVFAMLASQSEFTILRIAGLDVKRGLITLGKISLPLIVLTLVMSEWAG 126 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFR-----------LDDDL-YIKISKYNPNNTL 170 P + +Q+ KA + S + ++ + + + Y+ + K +N + Sbjct: 127 PYTEAKSEQIRMKALGSSYSSQFKTGVWVKDRLRDEDGSGPVRPGVRYVNVGKVEKDNEI 186 Query: 171 QGIFIVDSRDT-QTHKIYYAQSGSIDLDRQAIILNDG------EVHRKSPISKDISIMKF 223 + I + + D I A SG D +LND E+ + P++ S Sbjct: 187 RDIRMYEFNDVYNLLSIRSAVSGHFDETG-IWVLNDVTETRFKEIKQTDPLNPVFSAQTL 245 Query: 224 KSYTLQTES---ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWL 280 L ES +++L + ++ L ++ + ++ + F K++ Sbjct: 246 THPILTLESEVTPQILSVLLISPEKMSILSLGRFIDHLQENKQDVQRHSIAFWKKVVYPF 305 Query: 281 FPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL- 339 + +++ A + I L +SF +F + + P ++ L Sbjct: 306 TIFVMLALALPFAYLKVRAGSVGIKVFGGIMLGMSFQLFNSLFSNVGMLSAWPAFMTALT 365 Query: 340 -YLFLFCISSIFLLMIKK 356 L F ++ + L + K Sbjct: 366 PPLLYFLLALMGLRWVSK 383 >gi|33519519|ref|NP_878351.1| putative inner membrane protein [Candidatus Blochmannia floridanus] gi|33517182|emb|CAD83564.1| putative inner membrane protein; predicted permease [Candidatus Blochmannia floridanus] Length = 370 Score = 86.9 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 66/359 (18%), Positives = 133/359 (37%), Gaps = 19/359 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 YI++ I ++ L+ + ++ + + ++ ++L S+ + + IP + Sbjct: 2 ILIKYIMKEICKNQLIILILLLLACFCQKSIKVLSL--SNNIPIYWIFLYLFLSIPDLGK 59 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ PF + ++ + E+L + + ++ LI+ + + +++I I+ + Sbjct: 60 LIIPFSLFLSVLISCYRLHMHNEILAMYSCAVNKYVLIQSICMYSTVIAILSLINLAYLA 119 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIKISKYNPNNTLQGIFI---VDS 178 P C + + K + F L E F+ L D L + I N L +FI V + Sbjct: 120 PHCEQYKENIFFKMKKNTYFIELIEKKFYLLFDEHLVLFIDNI-KNGMLNHVFILKRVQN 178 Query: 179 RDTQTHKIYYAQSGSI----DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 D I A GSI + Q IIL G + ++ + I +F +Y Sbjct: 179 IDKNVFSIITADQGSIHYNFNDKSQLIILQSGMYYEI-HNTQLLCIPRFVTY-FNQYRTL 236 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 D N S + + N N EL E + RLT ++ I +I++ Sbjct: 237 VHDKYQFLRDVNKS-VKHMNINQLLISSELESYI--ELNWRLTLFISVFIMPMIALFVMM 293 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 A + + + F + I ++++ I LLM Sbjct: 294 NIAY---GYLSNFLLAVVLYVFFYMLHIMLYTCSVLNYMNIIILMWIINCIYLIILLLM 349 >gi|254247470|ref|ZP_04940791.1| hypothetical protein BCPG_02268 [Burkholderia cenocepacia PC184] gi|124872246|gb|EAY63962.1| hypothetical protein BCPG_02268 [Burkholderia cenocepacia PC184] Length = 382 Score = 86.9 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 49/380 (12%), Positives = 121/380 (31%), Gaps = 27/380 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRLYEKYFARQIYITFVFILFAFSGLFFFFDLISELNSVGHGNYKFGYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + + L I ++ Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLAANQALRSLLKIGVPLVIVTYLIGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF-------FRLDDDLY--IKISKYNPNNTLQ 171 + P +++ +A A S + ++ + + + + +P++T+ Sbjct: 121 VGPYADQLSERVRLQALGASVSSNFQSGVWVKDTLAARENGEQVTRFVNVGSLSPDSTIS 180 Query: 172 GIFIVD-SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-------------D 217 + I + Q + AQ+G + +L +PI Sbjct: 181 NVRIYEFDSKFQLQNVRIAQTGRYEP-PGHWLLKGVTETELTPIKPITGQPADALNPVYR 239 Query: 218 ISIMKFKSYTLQTE-SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRL 276 + Y L+++ + +++L + ++ L + + + Y ++L Sbjct: 240 SQQVSLPEYRLRSDLTPQILSVLLVSPERMSIINLFRYIQHLRENQQDTQRYDIALWRKL 299 Query: 277 TQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 + ++S+ A R +F + + + H N + Sbjct: 300 LYPFAVFVMLVLSLPFA--YLHTRAGVVGVKVFGGIMLGMSFQLLNTLFSHIGTLNTWPA 357 Query: 337 PILYLFLFCISSIFLLMIKK 356 P+ I L K Sbjct: 358 PLTAATPGLIYLALGLFALK 377 >gi|220925666|ref|YP_002500968.1| permease YjgP/YjgQ family protein [Methylobacterium nodulans ORS 2060] gi|219950273|gb|ACL60665.1| permease YjgP/YjgQ family protein [Methylobacterium nodulans ORS 2060] Length = 362 Score = 86.9 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 47/356 (13%), Positives = 116/356 (32%), Gaps = 18/356 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTV 60 + YI + R L + + + + ++ + + ++S P++ Sbjct: 5 TTLGRYIAGRLLRMIAGVFLTVFALVYTLDFVELMRRAGETQGIGALTVARLSLLRTPSI 64 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + PF L ++R EL++ G S ++P +F+A+ + + + N Sbjct: 65 AEQIMPFAILFGAMGALLQLSRKLELVVARAAGISAWQFLQPGVFVALAVGALMVGAYN- 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + +KQ S + + + DL+I+ + ++ ++ Sbjct: 124 --PMA-AALKQHSTEIEARIFSRSNRGGS----GKDLWIRQRSVDGQAIVRAETAIEGTT 176 Query: 181 TQTHKIYYA--QSGSI--DLDRQAIILNDG--EVHRKSPISKDISIMKFKSYTLQTESAN 234 T +A G+ ++ + L+DG E+ ++KD + +Y + + Sbjct: 177 TLAGVSVFAFDDQGTFTQQIEARQATLHDGYWELQDARVLAKDSQPESYDTYLVASNLVP 236 Query: 235 SSTI-VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 S D + L YR + L + + + ++ + A+ Sbjct: 237 SQVRQRFTPPDSVPFWQLGDTIARSERAGLDATRYRLQRAVLLARPM--LFVAMVLVAAS 294 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 R ++ F ++ + P+ F + S+ Sbjct: 295 VSLRFFRFGGIGRMALAGVAAGFALYVARQVMEGLGASGIVAAPVAAWFPAVVGSL 350 >gi|319793490|ref|YP_004155130.1| permease yjgp/yjgq family protein [Variovorax paradoxus EPS] gi|315595953|gb|ADU37019.1| permease YjgP/YjgQ family protein [Variovorax paradoxus EPS] Length = 369 Score = 86.9 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 53/377 (14%), Positives = 134/377 (35%), Gaps = 30/377 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVS---SSTESLNILLKISGYLI 57 MK+ I ++ L + + + + + V S L L+ Sbjct: 1 MKTIRRLIYVEALKAVAFVTLGFLCLFFFFDFVDELQSVGKPESLAYGPMQALIYVTLLV 60 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 P+ L + P + V+ + +++E I+ +G ++ +L L + I F Sbjct: 61 PSHLYELLPITVLIGCIFVMARLAQSSEYTILRTSGLGPWRALRTLLLLGVGFVILTFAI 120 Query: 118 ENIIEPKCRSTIKQLSAKAQLAL-----TFSYLEENLFFRLDDDLY--IKISKYNPNNTL 170 + I P T + L ++ Q T ++L+E D++ + + + + +L Sbjct: 121 GDYIAPLSERTGQLLKSRYQGTYSLVGNTGAWLKEKR-----DNVSYAVNVLSISRDGSL 175 Query: 171 QGIFIVDSRDTQ-THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK----S 225 + I + K +S I A+ + + + + I+ + Sbjct: 176 KNARIFEFDANGYVSKQLVVKSARILDGHWALADIEKQDYDTRSAADKARIVTTEIPQMD 235 Query: 226 YTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIF 285 + + S +L+ + + L + + + + + Y EF +++ L ++ Sbjct: 236 WPTSLTAEMVSVALLRPDRMSTIDLFD-YIRHLDANGQTAQRYEIEFWRKVFYPLSCLVM 294 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYI----PI 338 ++++ A RQ +F + I F F Y+ + +P+ + Sbjct: 295 VVLALPFA--YLHFRQAGITTYVFGGVMIGISFFLLNNVFGYLGNLSNWSPWLTAAAPGL 352 Query: 339 LYLFLFCISSIFLLMIK 355 +Y + + +L++ + Sbjct: 353 IYSVMSLTAFSWLVLRR 369 >gi|295690098|ref|YP_003593791.1| permease YjgP/YjgQ family protein [Caulobacter segnis ATCC 21756] gi|295432001|gb|ADG11173.1| permease YjgP/YjgQ family protein [Caulobacter segnis ATCC 21756] Length = 353 Score = 86.9 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 42/340 (12%), Positives = 104/340 (30%), Gaps = 7/340 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 +LY+LR + L + L ++ I ++ +L + + + + +P + Sbjct: 2 KLQLYVLRTVATRILGAALILMSILQILDLLDVTTDILDRGLGMAGVAYYAALRLPRLFE 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 V P + + R + ++ + +G S ++ + I + + + ++ Sbjct: 62 QVAPIAVLAGGLFAFSQLARESAVVAMRASGISGYRIVGMAMPAVIAVMLLDALCGQVLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P+ T+ F D L I + + I R+ + Sbjct: 122 PRSDPTLADWWRNTTPVAERKAPSPRTFRAGSD-LVIGADASADGREITSLTIF-RRNAK 179 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + ++ D + L + R + S ++ + + Sbjct: 180 GILVEKVEASKALYDGRRWTLQSPKTTRFAGDLAQTSTAASINWPTALRPQDVQGLFGDD 239 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + + N + RPE Y + F ++ L+S A Q Sbjct: 240 SAPTAATARRALENGGSDRPESF--YATHFQSAFASPFVSLVMLLLSAPVALANFRSGQG 297 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 + + + F V G + ++ P+L ++ Sbjct: 298 AVLLTAGLGAGLLFLVANGMLTALG---ESGALSPLLAVW 334 >gi|134296647|ref|YP_001120382.1| permease YjgP/YjgQ family protein [Burkholderia vietnamiensis G4] gi|134139804|gb|ABO55547.1| permease YjgP/YjgQ family protein [Burkholderia vietnamiensis G4] Length = 382 Score = 86.9 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 49/381 (12%), Positives = 116/381 (30%), Gaps = 29/381 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRLYEKYFARQIYVTFVFILFAFSGLFFFFDLISELNSVGHGNYKFGYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M ++E I +G + ++ +L + + L I ++ Sbjct: 61 FYEIIPVAALISAIYVFAQMAASSEFTIFRVSGLATNQALRSLLKIGVPLVIITYLIGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF-------FRLDDDLY--IKISKYNPNNTLQ 171 + P +++ +A A S + ++ + + + + +P++T+ Sbjct: 121 VGPYADQLSERVRLQALGASVSSNFQSGVWVKDTLAARENGEQVTRFVNVGSLSPDSTIS 180 Query: 172 GIFIVD-SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-------------D 217 + I + Q + AQ+G + +L +PI Sbjct: 181 NVRIYEFDSKFQLQNVRIAQTGRYEP-PGHWLLKGVTETELTPIKPIAGQPADALNPVYR 239 Query: 218 ISIMKFKSYTL--QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKR 275 + Y L S +++ +L L + + + Y ++ Sbjct: 240 SQQVSLPEYRLRSDLTPQILSVLLVSPERMSLINLFR-YIQHLRENQQDTQRYDIALWRK 298 Query: 276 LTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY 335 L + ++S+ A R +F + + + H N + Sbjct: 299 LLYPFAVFVMLVLSLPFA--YLHTRAGVVGVKVFGGIMLGMSFQLLNTLFSHIGTLNTWP 356 Query: 336 IPILYLFLFCISSIFLLMIKK 356 P+ I L K Sbjct: 357 APLTAATPGLIYLALGLFALK 377 >gi|148244590|ref|YP_001219284.1| hypothetical protein COSY_0441 [Candidatus Vesicomyosocius okutanii HA] gi|146326417|dbj|BAF61560.1| hypothetical protein [Candidatus Vesicomyosocius okutanii HA] Length = 357 Score = 86.9 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 53/359 (14%), Positives = 134/359 (37%), Gaps = 30/359 (8%) Query: 9 LRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFC 68 +R + I + + Q++ + + LL + G+ + + + Sbjct: 1 MRNTLVILSAVFIVISLVVFGNQLVVVVKESLEEGIPVKDLLPLVGFNMIRDIVPILSLS 60 Query: 69 FAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRST 128 + + + +N+E +I+++ G + + + L I++ I + I ++ P + Sbjct: 61 LLLAIILSINKLYKNSEAVIMNSLGLNNKHFMVFIQPLVIVIVIVIVILTTVVVPWSKQQ 120 Query: 129 IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKY------NPNNTLQGIFIVDSRDTQ 182 + ++ FS+++E F + I + + ++GIFI + Sbjct: 121 KDLIINHSKNISKFSFIKEREFQEFKNGDIIFFASKVSNFNNSKEQNMEGIFIYTFIN-N 179 Query: 183 THKIYYAQSGS----IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS-- 236 I A+ ++ + + L +G + + I+ F Y +Q N Sbjct: 180 EPVIILAKQAKKYTNLNTNSVYLRLKNGTNYHGFILDTKKKILNFNLYDIQIIDGNMKKL 239 Query: 237 -TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + V+K ++ L + +L E +EF R++Q L +I + ++ Sbjct: 240 ISKVIKVESKSTFELF--------FSRKLTE--IAEFQWRISQPLSILILSALGVL---L 286 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + + + I + + F ++ I + + +PI+ L+ + + LL+I Sbjct: 287 GRTSQNGGRNLGVLIGVVV-FILYNNALLISKSVLERGESLPII--GLWWVHLVMLLLI 342 >gi|222085452|ref|YP_002543982.1| permease protein [Agrobacterium radiobacter K84] gi|221722900|gb|ACM26056.1| permease protein [Agrobacterium radiobacter K84] Length = 361 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 53/359 (14%), Positives = 118/359 (32%), Gaps = 21/359 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTV 60 + Y + L L + + ++I + ++ ++ I L ++ +P + Sbjct: 4 STLGRYFFTRYIITTLWFFLGVTSLVYLIDFSETAGRLAGLPGYTVKIGLLMTAVRLPFI 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + PF VL ++NR EL+I G S + P + A + + ++ N Sbjct: 64 MQQTVPFIALFVGMTVLIALNRRRELVIARAAGISVWQFMTPFVVGAFCVGLLTMLALNP 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD---LYIKISKYNPNNT--LQGIFI 175 + + + + A + ++ + R D + I N T + +FI Sbjct: 124 VAAWGQRQAETMEADLRGDPSYRNTLSIPWLRQSDGKSDIIIGAKAVLDNGTTLMNVVFI 183 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKS---PISKDISIMKFKSYTLQTES 232 AQS + L + V R P K + ++ + Sbjct: 184 HFDSQGNIILRQDAQSAKL---ENGYWLLNSVVERAPGEIPAHKSTTQVR-----TNLKQ 235 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 S + + L N + ++FH L+Q V LI+ Sbjct: 236 DFVSERLAQPETIAFYDLSNR-IAIAKSFGISTKALETQFHSLLSQPFLLVAMTLIAATV 294 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + K + Q + + I + F ++ + ++ + P + ++ I ++ Sbjct: 295 SLKFSRFNQSRSV--ILGGILSGFVLYVV-TVLVKAFGSSGVVPPFVATWIPVIVALAF 350 >gi|206561016|ref|YP_002231781.1| putative permease [Burkholderia cenocepacia J2315] gi|198037058|emb|CAR52979.1| putative permease protein [Burkholderia cenocepacia J2315] Length = 382 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 49/380 (12%), Positives = 121/380 (31%), Gaps = 27/380 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRLYEKYFARQIYITFIFILFAFSGLFFFFDLISELNSVGHGNYKFGYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + + L I ++ Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLLKIGVPLVIVTYLIGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF-------FRLDDDLY--IKISKYNPNNTLQ 171 + P +++ +A A S + ++ + + + + +P++T+ Sbjct: 121 VGPYADQLSERVRLQALGASVSSNFQSGVWVKDTLAARENGEQVTRFVNVGSLSPDSTIS 180 Query: 172 GIFIVD-SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-------------D 217 + I + Q + AQ+G + +L +PI Sbjct: 181 NVRIYEFDSKFQLQNVRIAQTGRYEP-PGHWLLKGVTETELTPIKPISGQPADALNPVYR 239 Query: 218 ISIMKFKSYTLQTE-SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRL 276 + Y L+++ + +++L + ++ L + + + Y ++L Sbjct: 240 SQQVSLPEYRLRSDLTPQILSVLLVSPERMSIINLFRYIQHLRENQQDTQRYDIALWRKL 299 Query: 277 TQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 + ++S+ A R +F + + + H N + Sbjct: 300 LYPFAVFVMLVLSLPFA--YLHTRAGVVGVKVFGGIMLGMSFQLLNTLFSHIGTLNTWPA 357 Query: 337 PILYLFLFCISSIFLLMIKK 356 P+ I L K Sbjct: 358 PLTAATPGLIYLALGLFALK 377 >gi|329894347|ref|ZP_08270217.1| putative permease [gamma proteobacterium IMCC3088] gi|328923143|gb|EGG30466.1| putative permease [gamma proteobacterium IMCC3088] Length = 353 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 38/317 (11%), Positives = 102/317 (32%), Gaps = 8/317 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + Y+ + + + L +V + + ++ + + ++ + + L +P Sbjct: 1 MRLLDRYVGMQVIYATCLVLLVLVGLDALSALIDELQDLKAN-YTFSKALLYVAASVPAR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + L + +EL++I G S L++ ++ ++ + + I Sbjct: 60 IVELAPIGILIGVLVALGQLASTSELVVIRGAGLSSWHLLRILMKPVLVFAGLMLIMGEF 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + PK + A A ++ R + +I + + G+ + D Sbjct: 120 VVPKSEQFGEAERALALSNKGSITGRYGMWNR-EGRHFIHFNAVQAGGVIYGVTLFTFDD 178 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + H+ A + R +L + + + + S + + Sbjct: 179 NWRLHESMSANRATFQ--RAGWLLENVQRTQVNSWGSQTSEHTTLLWETDLTPDLLAMES 236 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGL--ISIVAADKRA 297 L +++ L + Y ++LTQ L + L + + R Sbjct: 237 LSPERLSINGLF-QYSQYLKQQGLESADYEVAAWRKLTQPLAIFVLVLVAMGFIFGPLRD 295 Query: 298 LVRQRKKIHPIFISLSI 314 + + L Sbjct: 296 GTLGLRVFIGTLVGLVF 312 >gi|255263663|ref|ZP_05343005.1| permease YjgP/YjgQ family protein [Thalassiobium sp. R2A62] gi|255105998|gb|EET48672.1| permease YjgP/YjgQ family protein [Thalassiobium sp. R2A62] Length = 363 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 45/337 (13%), Positives = 104/337 (30%), Gaps = 13/337 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y R +FL + I + +++++ S S + ++ P L Sbjct: 2 ILHRYFARRFFLAFLGVFVIFFAILGFLDMVEQLGKFSGDDVSFTQTVGLTLLNTPQALY 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + T + S+ R++E+++ G S I + +F+A+L+ +F N I Sbjct: 62 RILPLVMILSTIALFLSLARSSEMVVTRAAGRSAIRALSAPIFVAVLIGLFAVAVLNPIV 121 Query: 123 PKCRSTIKQLSAKAQLALT--FSYLEENLFFRLDDD---LYIKISKYNPNNT-LQGIFIV 176 ++ ++ + S E L+ R D+ I+ T L + + Sbjct: 122 AATSQEYEKRASDYRSDDAQVLSVSAEGLWLRQGDNTQQTVIRAEAATLEGTELSRVTFL 181 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL--QTESAN 234 D A S + A L + + + + S K + Sbjct: 182 SFTDAGPITRIEADSARLTPG--AWELTNAKSWPLDAPNPEASSTKHDVLRVPSTLTRDQ 239 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + + L + F+ L + ++ + A Sbjct: 240 IRDGFGTPSAIPIWELPA-FIKQLETAGFSARRHAVWFNMELALP--AFMVSMVMVAAGL 296 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ 331 R + + ++ + F ++ ++ E Sbjct: 297 TMRHQRGGRVGLSVLAAIMLGFAFYFLRNFAQILGEN 333 >gi|226329628|ref|ZP_03805146.1| hypothetical protein PROPEN_03538 [Proteus penneri ATCC 35198] gi|225202814|gb|EEG85168.1| hypothetical protein PROPEN_03538 [Proteus penneri ATCC 35198] Length = 232 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 88/201 (43%), Gaps = 2/201 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI R I +S LM+ +V ++ +I+ + ++ V + + I + Sbjct: 3 GVLDRYIGRTILQSILMTLFLLVSLSGIIKFVDQLRKVGQGDFTTLDAGIYAILNILKDV 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ +EL+++ +G +R+ + V+ AI L + + Sbjct: 63 QIFFPMAALLGALLGLGALATRSELVVMQASGFTRLQIAGSVMKTAIPLVLLTVLIGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SRD 180 P+ + A+ + + ++ + D + +I I++ N +QGI + D + D Sbjct: 123 APQGEQYARNYRAEKIMGNSLVSTNRGMWAK-DGNQFIHINRIKSQNEMQGITLYDFNND 181 Query: 181 TQTHKIYYAQSGSIDLDRQAI 201 + + YA S + D+D++ + Sbjct: 182 RKLETVRYASSATYDVDKKNV 202 >gi|182413838|ref|YP_001818904.1| permease YjgP/YjgQ family protein [Opitutus terrae PB90-1] gi|177841052|gb|ACB75304.1| permease YjgP/YjgQ family protein [Opitutus terrae PB90-1] Length = 369 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 50/373 (13%), Positives = 107/373 (28%), Gaps = 23/373 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M ++ ++LR + V + V + + L +P Sbjct: 1 MNLYDRHLLREWLAILGLVLCATVGLLLVQVLYDDFRDLRELGARGLDLWMYLFVTVPMY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L +V P + VL ++R E + G S + + PV + + + Sbjct: 61 LALVLPLALLVSLMFVLGKLHRANEFTALRAAGVSLLRITAPVWIVGMFACGLSWWLNTT 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENL--------FFRL-DDDLYIKISKYNPNNTLQ 171 + P L + + + + F D ++ Sbjct: 121 VVPWSVDESAALRDTMRFRKESNLMPPDRVSAVYSVGFDNPRADRMWFFNRYSKWTQKAY 180 Query: 172 GIFIVDSRDTQTHK-IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDI-SIMKFKSYTLQ 229 G+ + + + A+ + +R +G P + ++ S + F Sbjct: 181 GVTVSIMDEHRRELQRIVAEQAWFEAER-GWTFRNGRELTFRPDTGELESTVPFTERVEA 239 Query: 230 TESANSS---TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFG 286 + I K D +L L Y + + L P+I Sbjct: 240 QFREDPKLMLLIDRKPTDLSLPQLRRLIDYYAIEENPKGTPYAVRYFGLVADTLAPLIVI 299 Query: 287 LISIVAADKRALVRQRKKIHPIFISLSIS-FGVFWGFSYIIHKIEQNPYYIPI--LYLFL 343 I+I A + I +S SI F +++ FS I + P+ ++ Sbjct: 300 AIAIPFAVTGV-----RVNAAIGVSKSIGLFMLYYIFSNIASALAAKQLVDPMTAAWVPN 354 Query: 344 FCISSIFLLMIKK 356 ++ + + Sbjct: 355 IGMALVAGWFFVR 367 >gi|149196258|ref|ZP_01873313.1| permease YjgP/YjgQ [Lentisphaera araneosa HTCC2155] gi|149140519|gb|EDM28917.1| permease YjgP/YjgQ [Lentisphaera araneosa HTCC2155] Length = 358 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 52/342 (15%), Positives = 121/342 (35%), Gaps = 11/342 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 YI+R + F+ +FI ++ + ++ + + +I++ LIP Sbjct: 4 SILSRYIMRSMLLPFVCCICGFIFIFFIANVQDDLSDMLKLDNTKDIIIYY-FLLIPDKF 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + T +S+NRN E++ + + G S L P+ ++L+ I L++S + Sbjct: 63 TYIAPMSLLLATIYCFSSLNRNHEVIAMRSAGLSLTKLSAPIYLFSVLVGISLYLSSQYL 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD---DLYIKISKYNPNNTLQGIFIVDS 178 EP CR +K + E ++F D + S + N + I D Sbjct: 123 EPYCR--LKTFELNTRAESMDRSHEFHIFTAFDGKQKRKWAVSSDEDNNFSAIQILEYDE 180 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + A SG + + + S + I K +Y L+ + + I Sbjct: 181 -NNNLTREIEALSGEFNS-EIGWNFKNVSIAEFSEDHRIKKIEKHDNY-LRNDIKDDPII 237 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKR-LTQWLFPVIFGLISIVAADKRA 297 + ++ + + + N + ++ R + P + ++ Sbjct: 238 LSNIDELKGTPSIAQIKSELNSGRPVDTKRKAFLETRQYSLIFSPFSCLIGVLLGIPLAT 297 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL 339 ++ + ++ I + S + + P++ Sbjct: 298 SSQRSPGMSAASRAIGIMLVYYIINSAFTNLGRNDI-LPPMM 338 >gi|317494175|ref|ZP_07952591.1| inner membrane protein yjgQ [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917948|gb|EFV39291.1| inner membrane protein yjgQ [Enterobacteriaceae bacterium 9_2_54FAA] Length = 356 Score = 86.6 bits (213), Expect = 6e-15, Method: Composition-based stats. Identities = 48/364 (13%), Positives = 121/364 (33%), Gaps = 16/364 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + YI R I + + + +V ++ +I+ + ++ V S + +P Sbjct: 2 LGVLDRYIGRTIFSTIMATLFMLVSLSGIIKFVDQLRKVGQGDYSAAGAGLYTLLSVPKD 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + L + + +EL+++ G +R+ + V+ AI L I Sbjct: 62 IEVFFPMAALLGALLGLGMLAQRSELVVMQAAGYTRMQIASSVMKTAIPLVILTMAIGEW 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ + A+ + + L+ + D +I I + ++QG+ I + Sbjct: 122 VAPQGEQAARNYRAQQMYGGSLLSTQTGLWAKDGTD-FIFIQRVTGEKSIQGVSIYSFDN 180 Query: 181 TQ-THKIYYAQSGSIDLDRQAI------ILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 + K+ YA S + + + + L D + S + Sbjct: 181 ERHLQKLRYANSATFEGHQWKLSQVEESNLTDSKRITGSQTLNGVWKT-------NLTPD 233 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + + + ++S L + + Y+ ++ L + L+++ Sbjct: 234 KLGVVAMSPDSLSISGLYH-YVKYLKQSGQESSRYQLNMWSKIFAPLSVAVMMLMALSFI 292 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 IS F V + + P + + L + ++ Sbjct: 293 FGPLRSVPMGVRVLTGISFGFFFYVLDEIFGPLSLVYSVPPVLGAILPSLLFLLISVYML 352 Query: 354 IKKK 357 ++K Sbjct: 353 LRKS 356 >gi|297620918|ref|YP_003709055.1| putative permease, YjgP/YjgQ family [Waddlia chondrophila WSU 86-1044] gi|297376219|gb|ADI38049.1| putative permease, YjgP/YjgQ family [Waddlia chondrophila WSU 86-1044] Length = 371 Score = 86.6 bits (213), Expect = 6e-15, Method: Composition-based stats. Identities = 41/360 (11%), Positives = 99/360 (27%), Gaps = 23/360 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+L + + + + + L I + + + + + IP +LP Sbjct: 4 IIWRYLLSQYFKVMGLCVAAFIAVLLTSR-LDEIAHFAVLSPTPALAAQFILLQIPYILP 62 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + + ++ ++++ EL + G S + P+LF ++L++ F + + Sbjct: 63 IVIPVSCLISSILLVQRLSKSHELTAFRSCGISLKDFLTPILFSSVLVAFINFYIISELS 122 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + + L + + + + Q Sbjct: 123 TYSHYQTIIWKEELRSTNPLHLLRNKHLMGAKGGFFNSLGDSKLGKNAGEVILALPNKNQ 182 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + + I D +G F ++ + + + Sbjct: 183 SRITLFLAKELISDDN----FFEGTDVTMITAMPSGDPDSFDHLLVENAAKTKTLTDDFS 238 Query: 243 NDQ------------NLSFLLNP--NPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 + LL + + SE +R + F L+ Sbjct: 239 QLMKQKQWKIGNDYLTMEQLLAKLYEEQANGFSVNDINCCYSEIIRRFSLGFSAFSFTLM 298 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 + + KKI + + + G + +I QN LY + Sbjct: 299 GLAFGISISRTHSLKKI----LWVVLLAGGYITTLFIGKSAGQNLSLSLALYTIPHLLII 354 >gi|324005416|gb|EGB74635.1| hypothetical protein HMPREF9532_04926 [Escherichia coli MS 57-2] Length = 359 Score = 86.6 bits (213), Expect = 6e-15, Method: Composition-based stats. Identities = 53/365 (14%), Positives = 129/365 (35%), Gaps = 24/365 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + Q+ + A + + N+ + + ++ + N G+ I RD Sbjct: 121 GASPLQQQALQIKSTATALGEDNDIIGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK-------FKSYTLQTES 232 YA+S +I+ D+ IL+ + + + + F S L+ S Sbjct: 181 DLSLESYIYARSATIEDDKT-WILHGVNYKKWLNGKETLETLDNLAWQSAFTSMNLEELS 239 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 +T ++ + + +L + Y ++L Q + + L+++ Sbjct: 240 MPGNTFSVRQLNHYIHYL--------QDTGQPSSEYHLALWEKLGQPILTLAMILLAVPF 291 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-----FLFCIS 347 ++ R + + + + + + +++ P+ L F+ Sbjct: 292 --TFSVPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVAL 349 Query: 348 SIFLL 352 S+ Sbjct: 350 SLVYW 354 >gi|330720162|gb|EGG98555.1| putative Permease [gamma proteobacterium IMCC2047] Length = 323 Score = 86.6 bits (213), Expect = 6e-15, Method: Composition-based stats. Identities = 39/272 (14%), Positives = 88/272 (32%), Gaps = 12/272 (4%) Query: 49 LLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAI 108 +L +P + ++TP + + L + N+EL ++ G S + + A+ Sbjct: 19 VLMYVLMTVPKRIYVITPLAVLIGSLLGLGMLANNSELTVMRAVGMSVARISWAAIKPAL 78 Query: 109 LLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN 168 L + + P + + A A+ + ++ D ++ + P Sbjct: 79 LFVAAALLIGEFVVPHSENYAQSQRALAESRGEAVSSKYG-YWHRGGDTFMHFNAVLPGG 137 Query: 169 TLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 L G+ + D + + +A+ D + K D + + TL Sbjct: 138 VLYGVTQYEYDDKKLTRSLFAEKAIFQGDHWVLK------QIKHSYLSDTQVEAGEDLTL 191 Query: 229 ----QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVI 284 + +V+ D ++ L + N + + Y F K++ Q V+ Sbjct: 192 RWDTELTPEVLKVVVVDPADLSIMGL-HTYTNYLKEQELDAKRYLLAFWKKVLQPFAIVV 250 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISF 316 L+++ I L + F Sbjct: 251 MVLVALSCIFGPLRSVTMGYRVFAGIILGVVF 282 >gi|170697654|ref|ZP_02888742.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria IOP40-10] gi|170137402|gb|EDT05642.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria IOP40-10] Length = 382 Score = 86.6 bits (213), Expect = 6e-15, Method: Composition-based stats. Identities = 50/380 (13%), Positives = 121/380 (31%), Gaps = 27/380 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRLYEKYFARQIYVTFVFILFAFSGLFFFFDLISELNSVGHGNYKFGYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + I L I ++ Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLLKIGIPLVIITYMIGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF-------FRLDDDLY--IKISKYNPNNTLQ 171 + P +++ +A A S + ++ + + + + +P++T+ Sbjct: 121 VGPYADQLSERVRLQALGASVSSNFQSGVWVKDTLAARENGEQVTRFVNVGNLSPDSTIS 180 Query: 172 GIFIVD-SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-------------D 217 + I + Q + AQ+G + +L +PI Sbjct: 181 NVRIYEFDSKFQLQNVRIAQTGRYEP-PGHWLLKGVTETELTPIKPISGAPADALNPVYR 239 Query: 218 ISIMKFKSYTLQTE-SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRL 276 + Y L+++ + +++L + ++ L + + + Y ++L Sbjct: 240 SQQVTLPEYRLRSDLTPQILSVLLVSPERMSIINLFRYIQHLRENQQDTQRYDIALWRKL 299 Query: 277 TQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 + ++S+ A R +F + + + H N + Sbjct: 300 LYPFAVFVMLVLSLPFA--YLHTRAGVVGVKVFGGIMLGMSFQLLNTLFSHIGTLNTWPA 357 Query: 337 PILYLFLFCISSIFLLMIKK 356 P+ I L K Sbjct: 358 PLTAATPGLIYLALGLFALK 377 >gi|315608793|ref|ZP_07883769.1| conserved hypothetical protein [Prevotella buccae ATCC 33574] gi|315249487|gb|EFU29500.1| conserved hypothetical protein [Prevotella buccae ATCC 33574] Length = 416 Score = 86.2 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 54/365 (14%), Positives = 126/365 (34%), Gaps = 11/365 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPTV 60 K + YI++ ++ S I+ IA V + ++ + I+ IP Sbjct: 57 KILDWYIIKKFIGTYFFSIALIISIAIVFDFNENLSKFTQYHAPWRAIIFDYYANFIPYY 116 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +P + + + N+E++ + G S L++P + +L++ + Sbjct: 117 SNLFSPLFVFIAVIFFTSKLAGNSEIIAMLAAGVSFKRLMRPYMISCVLIAALTYYLGAY 176 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTL-QGIFIVDSR 179 P + I+Q T + +N+ ++D + I Y+ N G + Sbjct: 177 EIPHG-TVIRQDFEALYRNNTKNTAADNVQLQVDKGVIAYIQHYDNNTKKGYGFKLNKFE 235 Query: 180 DTQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 D + A D + + + + + + + I+ K + E + Sbjct: 236 DKKLVSDLTAMEVQYDTISDTKFHWRMRNWKQRKLQGLKEHITSGAEKDTVILMEPTDLV 295 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + + Y+ E+HKR+ I +I + + ++ Sbjct: 296 YSKGQQETFTSPELREYISKQIDRGSSNVVQYQVEYHKRIATSFASFILTVIGLSLSSRK 355 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF-LFCISSIFLLMIK 355 R+ + + L++SFG + + N P+L + + +I + Sbjct: 356 ---RKGGMGLYLGLGLALSFG-YIMLQTVSATFAINAGAPPMLAAWTPNMVFAIVAYFLY 411 Query: 356 KKYTK 360 +K K Sbjct: 412 RKAPK 416 >gi|254669826|emb|CBA04196.1| conserved hypothetical protein [Neisseria meningitidis alpha153] Length = 182 Score = 86.2 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 65/175 (37%), Gaps = 2/175 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +IL + + + +L + +P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGKGSYGIWEMLGYTALKMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + +EL +I +G S L+ + + +I Sbjct: 61 AYELMPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLILSQFGFIFAIATVALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI 175 + P + + A A + L+ + + + I + + P++TL GI I Sbjct: 121 VAPTLSQKAENIKAAAINGKISTGNT-GLWLK-EKNSIINVREMLPDHTLLGIKI 173 >gi|313144652|ref|ZP_07806845.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] gi|313129683|gb|EFR47300.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] Length = 341 Score = 86.2 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 58/358 (16%), Positives = 129/358 (36%), Gaps = 17/358 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+ + F L + FIA V+ ++ S L + YLIP+ Sbjct: 1 MAMLKKYLFSSFAQIFFPFFLVLFFIASVVLLIDIAGRTYVVKMSFLDLGTLFMYLIPSS 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P F ++ + + EL++ + G+ + +++ L + +L ++ LF+ I Sbjct: 61 LFFIIPITFFAALVLGISRLAYDYELMVCFSLGSKPLDMVRFFLPITLLATLVLFVFSFI 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P S K A+ + + + ++ F + D + + + N Q + + Sbjct: 121 LLPLTTSASKNFVAQKKADIDVN-IKPGEFGQKLGDWLVYVDSVD-NRKYQNLVLFSENG 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + AQSG + ++ LN ++I + + + +++ + Sbjct: 179 FEGDTFIVAQSGQTNNNQGLFELNLTSGKAYFAAPEEIKRVDYNTMSVRQNVSEPQLSGY 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + E + R +L Q + +F L+SI + Sbjct: 239 DLIAYWK----------EAFSLESRQKLR-----KLAQAVMVSLFPLVSIFLIPLFGIAN 283 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 R + + + + S +++ YI I I L+ F ++ I + Y Sbjct: 284 PRFRSNMSYFYVIGSVALYFVLMYIASDNFALVGMISIPILWFFGGFFLYKKFIARFY 341 >gi|282880317|ref|ZP_06289031.1| putative membrane protein [Prevotella timonensis CRIS 5C-B1] gi|281305819|gb|EFA97865.1| putative membrane protein [Prevotella timonensis CRIS 5C-B1] Length = 391 Score = 86.2 bits (212), Expect = 8e-15, Method: Composition-based stats. Identities = 50/362 (13%), Positives = 117/362 (32%), Gaps = 20/362 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 +K + YI++ +++ S I+ IA V + ++ + + I+ IP Sbjct: 31 IKRIDWYIIKKFIGTYIFSIALIIAIAIVFDFNENLSKFTEYKAPVRAIIFDYYANFIPY 90 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + TG S L++P + IL++ F Sbjct: 91 FSNLFSPLFVFIAVIFFTSKLAGNSEIIAMLATGISFKRLMRPYMISCILIASVSFFLSA 150 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDS 178 + P + ++Q +N+ ++D I Y+ G + Sbjct: 151 YVIPHG-TVVRQNFDNLYKNNKKRSAADNVQLQVDKGTIAYIQHYDNKTKRGYGFSLDKF 209 Query: 179 RDTQTHKIYYAQSGSIDL----------DRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 +D + A D I G + ++ +++ + L Sbjct: 210 KDKKLVSHLTAMEIQYDTIADAKYHWTVTGWKIRELKGLREHITSGAERDTVIMMEPMDL 269 Query: 229 QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 T + +S +N N + Y+ E+HKR+ I +I Sbjct: 270 VYSKGQQETFTSPELREYISKQVNRGSGN-------VVQYQVEYHKRIASSFASFILTII 322 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 + + ++ + + + + + P + LF + + Sbjct: 323 GLSLSARKRKGGMGLYLGLGLALSFLYILLQTISATFAINADAPPMLAAWVPNILFSVVA 382 Query: 349 IF 350 F Sbjct: 383 YF 384 >gi|186476978|ref|YP_001858448.1| permease YjgP/YjgQ family protein [Burkholderia phymatum STM815] gi|184193437|gb|ACC71402.1| permease YjgP/YjgQ family protein [Burkholderia phymatum STM815] Length = 382 Score = 86.2 bits (212), Expect = 8e-15, Method: Composition-based stats. Identities = 57/381 (14%), Positives = 132/381 (34%), Gaps = 29/381 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R + +F+ + + ++ +N V + P+ Sbjct: 1 MRIYEKYFARQVYLTFVFILFAFSGLFFFFDLINELNSVGHGNYKFQYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + I L ++ + Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEYTIFRVSGLATNQALRSLLKIGIPLVFLTYLIGEV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRL-----DDD----LYIKISKYNPNNTLQ 171 + P +++ +A + S E ++ + D ++ + + P+ T+ Sbjct: 121 VGPYTDQLSERVRLEALGSSVSSNFESGVWVKDTLTARADGEQVTRFVNVGQLQPDATIS 180 Query: 172 GIFIVD-SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDIS----------- 219 + I + + + A+SG +L D + +++D S Sbjct: 181 NVRIYEFDSKFRLSNVRIAKSGKYQP-PGHWLLTDVTDTQLIDVAQDASKPADALNPVYR 239 Query: 220 --IMKFKSYTLQTE-SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRL 276 Y+L++E + +++L A ++ F L + + + Y ++L Sbjct: 240 AKQAALPEYSLRSELTPQILSVLLVAPERMSMFNLFRYIQHLTENHQDTQRYEIALWRKL 299 Query: 277 TQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYY 335 + ++S+ A I L +SF +F FS+I + N + Sbjct: 300 LYPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLFNTLFSHIGNL---NTWP 356 Query: 336 IPILYLFLFCISSIFLLMIKK 356 P+ I + L+ K Sbjct: 357 APLTAATPALIYLVLGLVGLK 377 >gi|149193964|ref|ZP_01871062.1| hypothetical protein CMTB2_02728 [Caminibacter mediatlanticus TB-2] gi|149135917|gb|EDM24395.1| hypothetical protein CMTB2_02728 [Caminibacter mediatlanticus TB-2] Length = 323 Score = 86.2 bits (212), Expect = 8e-15, Method: Composition-based stats. Identities = 66/357 (18%), Positives = 129/357 (36%), Gaps = 36/357 (10%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +YIL FL I I +I I+ N+ S + LLK +P + Sbjct: 1 MRKISVYILNQFLPLFLTIFFVISAIISLIYIITISNITSKIQITFIELLKFYILSMPQI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + F + N+ + ++ EL+ + + G TL+ P+L LAILL+ I Sbjct: 61 LLITLAISFFISAINLYSKLSETQELIALFSLGFKPKTLLNPILLLAILLTFINLFILFI 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + L + + F++ + + + D I +K NN+ I++ Sbjct: 121 SIPYAKMNFNNLKNEKKQEAKFNF-QSSQVSQQFGDWVIFANK-GKNNSFTKIYLY---S 175 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + +K +Q+ + + + ++ Y + Sbjct: 176 PKENKFIISQNAQLQNKNSVL---------------NFALTIGNIYDFNKSMQ------I 214 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVI-FGLISIVAADKRALV 299 K N ++ L+ + + + + EF K L L P+ F I +++ L Sbjct: 215 KFNKMEINQLIPKVKISIFNFKDYFKYNKKEFAKYLPIALLPITLFFFIPLISFFHPRLN 274 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + HP+F +++I I+ +N ++ + F I I K Sbjct: 275 K----SHPLFYAITI-----LSIYSIVSLSNKNFILSILISVLFFIIGGILYKWKVK 322 >gi|15836745|ref|NP_297433.1| hypothetical protein XF0140 [Xylella fastidiosa 9a5c] gi|9104926|gb|AAF82953.1|AE003867_7 conserved hypothetical protein [Xylella fastidiosa 9a5c] Length = 368 Score = 86.2 bits (212), Expect = 8e-15, Method: Composition-based stats. Identities = 52/377 (13%), Positives = 128/377 (33%), Gaps = 29/377 (7%) Query: 1 MKSF----ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYL 56 MK F + Y+ R + + L++ L ++ + V + + + S + Y Sbjct: 1 MKLFPCLHDRYVARAVVATVLLTWLVLLGLDVVNAFASEVRDIGKGSYSFGHAIAYIAYT 60 Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 +P + P + L + +EL + G SR L V+ + + + + + Sbjct: 61 VPRRAYTLFPTAAVIGMLLGLGQLAATSELTALRALGVSRKRLSLSVMMMIGMGTGLMAL 120 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS-----KYNPNNTLQ 171 + + P ++ L A A+ + + F+ + ++++ + + + Sbjct: 121 TGETLGPWAQAQADILKASAKYQSDMTGARYSGFWAREGEVFLNARSGEEKRLDSGGIM- 179 Query: 172 GIFIVDSR----DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 + + D R ++ ++ + IL +V R + + + F S Sbjct: 180 -LILHDVRLYQLAADGRLQSMTRAARVEHHQDVWILQ--QVQRDTFSERGVQRETFHSLP 236 Query: 228 LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPEL---LETYRSEFHKRLTQWLFPVI 284 ++ ++ A +NLS + + YR + ++ R W +PV Sbjct: 237 WRSRLDPAALAAGLAKPRNLSA--HELVQSIEYRRRNHLDARDFEGQYWSR---WFYPVN 291 Query: 285 FGLISIVAAD-KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ--NPYYIPILYL 341 + + A L+R F+ + + FW +I Y L Sbjct: 292 VLALCLAAIPFSFGLLRSGGMGKRTFLGILFALS-FWMLQMFFERIASVLKLNYQIFYLL 350 Query: 342 FLFCISSIFLLMIKKKY 358 + + ++++ Sbjct: 351 PPMVMLGGSYWLFRRQH 367 >gi|154148987|ref|YP_001406533.1| YjgP/YjgQ permease [Campylobacter hominis ATCC BAA-381] gi|153804996|gb|ABS52003.1| putative permease, YjgP/YjgQ family [Campylobacter hominis ATCC BAA-381] Length = 340 Score = 86.2 bits (212), Expect = 8e-15, Method: Composition-based stats. Identities = 66/367 (17%), Positives = 139/367 (37%), Gaps = 37/367 (10%) Query: 1 MKSFELYILRCIGRSF--LMSCLFIVF-IAWVIQILQRINLVSSSTESLNILLKISGYLI 57 M E Y+ +F L S LF++ I + +QI + + V +L L K+ +++ Sbjct: 1 MYRAEKYLFSNFLSTFASLFSTLFLIMSIIFFLQIARITSFVE---INLYELTKLYLFML 57 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 P +L P F + L +++ E +++ G S + + LFLA ++S+ + + Sbjct: 58 PRILIFTIPISFFVALAMSLFRLSKENETIVLFTLGYSSEKIARFFLFLAFIVSVSMLLI 117 Query: 118 ENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS---KYNPNNTLQGIF 174 + P +K + ++ + F + D + I + N + + + Sbjct: 118 SLFMMPLA-ENLKDNFVSYKKISANLNIKSSEFGQKFSDWLVFIDDQKETNTGSIYENLI 176 Query: 175 IVDSRDTQTH-KIYYAQSGSIDLDRQ--AIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 + ++ + +I A SG I + ++ L +G+ + IS F ++T Sbjct: 177 LYHPKNKTSDERIILASSGEIANENSNFSLKLKNGKAYTNDEKKWHISY--FDELIIRTV 234 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 + K + N N + + L+ ++ +F L SI Sbjct: 235 QKD------KIKENGGILGYWKNEKNASKQ--------------LSIYVLVSLFPLASIY 274 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 A +V R + I+I + + F+ I+ +Q IP+ + +S IF Sbjct: 275 FAVSFGIVTYRYEKGFIYIGIFGVLFCY--FAMIMIFAKQPLLAIPLTFFIFLILSYIFY 332 Query: 352 LMIKKKY 358 + Sbjct: 333 RQKIARR 339 >gi|259419234|ref|ZP_05743151.1| permease YjgP/YjgQ [Silicibacter sp. TrichCH4B] gi|259345456|gb|EEW57310.1| permease YjgP/YjgQ [Silicibacter sp. TrichCH4B] Length = 368 Score = 86.2 bits (212), Expect = 8e-15, Method: Composition-based stats. Identities = 61/364 (16%), Positives = 128/364 (35%), Gaps = 19/364 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 +LY + + FL+ ++ + +I + ++ LL+++ P L Sbjct: 2 ILDLYYAKRFFQWFLVIAAVLMSLVMLIDLSEQFRRFDGQDLQFGQLLELTLLNTPAALN 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + T + M R++EL++ G S I + P + +A++L + N I Sbjct: 62 EFLPLIMILTTIVLYVGMARSSELVVTRALGRSGIRALLPPVVVALILGGLAVSTLNPIV 121 Query: 123 PKCRSTIKQLSAKAQLA---LTFSYLEENLFFRLD--DDLYIKISKYNPNNTLQGIFIVD 177 + LS + S E L+ R + + I N + +F+ D Sbjct: 122 AATTNRFDSLSESYRQTGGPAAVSLSGEGLWLRQGGQNGQSV-IHAANYRGDAENLFLYD 180 Query: 178 ------SRDTQTHKIYYAQSGSIDLDRQAIILNDGEV-HRKSPISKDISIMKFKSYTLQT 230 + D + A +D + +L D +V ++ + S + L T Sbjct: 181 VSILTYTPDGGPTRRTIAAEARLDGED--WVLRDAKVWQLIVGVNPERSAKSYDELRLPT 238 Query: 231 ESANSSTIVLKANDQNLS-FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 N + +S + L + + ++ L + LF V L+ Sbjct: 239 TLTNERIRDTLGYAEGISIYELPQTIKSLSEAGFSTTRFQVWLQVELARPLFLVAMVLVG 298 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 AA R + S+ + F +++ ++ + +N +L + ++SI Sbjct: 299 --AAFTMRHTRLGGTGIAVLTSVLLGFALYFVHNF-ARILGENGQIPILLAAWAPPVASI 355 Query: 350 FLLM 353 L M Sbjct: 356 LLTM 359 >gi|301628860|ref|XP_002943564.1| PREDICTED: lipopolysaccharide export system permease protein lptG-like [Xenopus (Silurana) tropicalis] Length = 350 Score = 85.8 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 47/343 (13%), Positives = 104/343 (30%), Gaps = 32/343 (9%) Query: 42 STESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIK 101 L+ L +P L + P + T V+ + +++E I+ +G ++ Sbjct: 13 GGYQLSHALLTVVLRLPNYLYELLPISVLIGTIYVMARLAQSSEFTIMRTSGMGPGRALR 72 Query: 102 PVLFLAILLSIFLFISENIIEPKCRSTIKQL----SAKAQLALTFSYLEENLFFRLDDDL 157 +L L F + + P + L + T +L+E L Sbjct: 73 MLLVLGCAFVALTFAMGDYVAPMANRAGQMLKVRYLGQLTTGATGGWLKERK--DDGHSL 130 Query: 158 YIKISKYNPNNTLQGIFIVDSRDTQTHKIYY-AQSGSI------------DLDRQAIILN 204 + + P+ + GI I D D A S + D +L Sbjct: 131 AVNVRALGPDGQMIGIRIFDFDDQGRLSAQLQAASAQVAQTAQTAQTAEDAADAPGWVLT 190 Query: 205 DGEVHRKSPISKDISIMKFKSYT-----LQTESANSSTIVLKANDQNLSFLLNPNPNNPN 259 + R D + ++ + S +LK L ++ Sbjct: 191 QAQQRRFVLRGADQAHVEQTDSASMRWPTGITAEMVSAALLKPERMPTIELF-QYISHLE 249 Query: 260 YRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVF 319 + + Y EF +++ L ++ ++++ A R +F + F Sbjct: 250 ANGQSAQKYEIEFWRKVFYPLSCLVMVVLALPFA--YLHFRSGGLAAYVFGGVMAGISFF 307 Query: 320 WG---FSYIIHKIEQNPYYIPILYLFLFCISSI--FLLMIKKK 357 Y +P+ ++ +S+ F ++ ++ Sbjct: 308 LLNTVSGYAGTLQNWSPWLTAAAPGLIYSAASLAAFGWLVLRR 350 >gi|57242354|ref|ZP_00370293.1| conserved hypothetical integral membrane protein, putative [Campylobacter upsaliensis RM3195] gi|57017034|gb|EAL53816.1| conserved hypothetical integral membrane protein, putative [Campylobacter upsaliensis RM3195] Length = 351 Score = 85.8 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 60/363 (16%), Positives = 133/363 (36%), Gaps = 27/363 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K YIL + L L + I ++ +Q NL SS S L K+ G+++P + Sbjct: 11 LKLIFKYILNQFLGTHLSIFLVLFGIVSMVFFIQIANLTSSIEISFLDLFKLYGFMLPRI 70 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P F + T L +++ E ++ G + + + + L +A LS+ + + Sbjct: 71 LIFTLPLAFFVALTLALYRLSKENESVVFFTLGFTPLKMAQFFLKIATFLSVLMLGVALV 130 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV--DS 178 + P +++ + + F + D I I + I + S Sbjct: 131 MIPIVY-QLQKNFVDYKKTQIKFNYKTGEFGQKFLDWMIFIQD-EKEGGYENIIMYHPKS 188 Query: 179 RDTQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 D ++ A+ +++ + LN+G+++ + + I +F++ + T+ ++ Sbjct: 189 TDNLKEQLIIAKEANLERSNEGFAFRLNEGKMYNFD-GGEALFIGEFENLVVNTKFSD-- 245 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + N + EF + LFP+ L ++ Sbjct: 246 ----NLGQTKAFYEYWDDINTNADKAR-------EFVMYVCISLFPLASTLFALSFGIVT 294 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL-LMIK 355 + +F +++ FG+ + + +++ F F S I MI Sbjct: 295 YRYEKGFIYLGMFGVIAVYFGL------LSSLYKPPLLMSFLIFSFAFAASIICFKKMIM 348 Query: 356 KKY 358 +Y Sbjct: 349 SRY 351 >gi|282878370|ref|ZP_06287162.1| putative membrane protein [Prevotella buccalis ATCC 35310] gi|281299556|gb|EFA91933.1| putative membrane protein [Prevotella buccalis ATCC 35310] Length = 410 Score = 85.8 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 44/365 (12%), Positives = 118/365 (32%), Gaps = 26/365 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 ++ + YI+R +++ S I+ IA V + ++ + I+ +P Sbjct: 50 IRRIDWYIIRKFIGTYIYSIALIIAIAIVFDFNENLSKFTEYHAPARAIIFDYYANFVPY 109 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + +G S L++P + +L++ + Sbjct: 110 YSNLFSPLFVFIAVIFFTSKLAGNSEIIAMLASGISFKRLMRPYMLSCVLIASLSYYLSA 169 Query: 120 IIEPKC---RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + P R + L ++ ++ ++ + I Y+ F + Sbjct: 170 SVIPHGTVIRHNFESLYRNSRKQTAADNVQ----LQVGKGVIAYIQHYDNKTKRGYGFSL 225 Query: 177 DSRDTQTHKIYY----------AQSGS-IDLDRQAIILNDGEVHRKSPISKDISIMKFKS 225 D + + + A S ++ I G + + ++++ + Sbjct: 226 DKFENKKLVSHMTAMEIQYDTIADSKYHWNVTGWKIRQLKGLREHITSGADLDTLIQMEP 285 Query: 226 YTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIF 285 L T +S ++ +N + Y+ E+HKR+ I Sbjct: 286 TDLVYSKGQQETFTSAELKDYISKQVDRGSSN-------VVQYQVEYHKRIASSFASFIL 338 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC 345 +I + ++ + S+ + + P + +F Sbjct: 339 TIIGFSLSARKRKGGMGLYLGLGLALSSLYILLQTVSATFAINANAPPILAAWIPNIIFA 398 Query: 346 ISSIF 350 + + F Sbjct: 399 LVAYF 403 >gi|289806566|ref|ZP_06537195.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 219 Score = 85.8 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 82/208 (39%), Gaps = 12/208 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + + I++ ++ + + + L + +P Sbjct: 5 GVLDRYIGKTI---FTTIMMTLFMLVSLSGIIKFVDQLKKAGQGNYDALGAGMYTLLSVP 61 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L + + +EL+++ +G +R+ + V+ AI L + Sbjct: 62 KDIQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIG 121 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-- 176 + P+ + A+A + ++ L+ + ++ ++ I + + L GI I Sbjct: 122 EWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNN-FVYIERVKGDEELAGISIYAF 180 Query: 177 -DSRDTQTHKIYYAQSGSIDLDRQAIIL 203 D R + + YA S D + + L Sbjct: 181 NDQR--RLQSVRYAASAKFDPEHKVWRL 206 >gi|224418451|ref|ZP_03656457.1| hypothetical protein HcanM9_04150 [Helicobacter canadensis MIT 98-5491] gi|313141983|ref|ZP_07804176.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|313131014|gb|EFR48631.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] Length = 341 Score = 85.8 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 56/358 (15%), Positives = 126/358 (35%), Gaps = 20/358 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y+ + F + FIA V+ ++ + S LL + Y +P ++ Sbjct: 2 RIKNYLFHSFAQIFFPIFFVLFFIASVVIFIRIAGVTFVVQISFFELLSLYFYTLPLMIF 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 V P F + T L+ ++ + EL ++ G + +IK +A L+S LFI ++ Sbjct: 62 FVIPLSFFVACTLSLSRLSFDYELPVLFALGMNPSKIIKIFFPIAALVSFSLFILSLVLT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + +Q + + L+ F + D + + K +++ + I ++ + Sbjct: 122 PLSDTAYRQFLEE-RKNSININLQAGEFGQKLGDWLVYVQKSKEDSSYENIVLLSF--AK 178 Query: 183 THKIYYAQSGSIDLDRQAI--ILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + ++ + I + IL G ++R P + + F + +++ + L Sbjct: 179 EGGMIFSDNAKIVNQMGVMEAILEKGSIYR--PKEDFVEKILFDTLIIRSSITAIDEVDL 236 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + R + S F L + F ++ + Sbjct: 237 GVIGYWKRAFYENDRQKKTLRNLSMYVMMSCF------PLVSLFFF--PLLGVKNPRYQK 288 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + + + G+F+ Y+ ++L +F +IKK Y Sbjct: 289 NYTILQAMGV-----IGIFYALMYLFASYLPLLGMFIFPIIWLLLGYLLFERVIKKYY 341 >gi|315638467|ref|ZP_07893644.1| conserved hypothetical integral membrane protein [Campylobacter upsaliensis JV21] gi|315481458|gb|EFU72085.1| conserved hypothetical integral membrane protein [Campylobacter upsaliensis JV21] Length = 341 Score = 85.8 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 60/363 (16%), Positives = 130/363 (35%), Gaps = 27/363 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YIL + L L + I ++ +Q NL SS S L K+ G+++P + Sbjct: 1 MKLIFKYILNQFLGTHLSIFLVLFGIVSMVFFIQIANLTSSIEISFLDLFKLYGFMLPRI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P F + T L +++ E ++ G + + + + L +A LS+ + + Sbjct: 61 LIFTLPLAFFVALTLALYRLSKENESVVFFTLGFTPLKMAQFFLKIATFLSVLMLGVALV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV--DS 178 + P +++ + + F + D I I + I + S Sbjct: 121 MIPIVY-QLQKNFVDYKKTQIKFNYKTGEFGQKFLDWMIFIQD-EKEGGYENIIMYHPKS 178 Query: 179 RDTQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 D ++ A+ +++ + L+ G+++ I +F++ + T+ ++ Sbjct: 179 TDNLKEQLIIAKEANLERSNEGFAFRLSAGKMYNFDADEALF-IGEFENLVVNTKFSD-- 235 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + N + EF + LFP+ L ++ Sbjct: 236 ----NLGQTKAFYEYWDDINTNADKAR-------EFVMYVCISLFPLASTLFALSFGIVT 284 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL-LMIK 355 + +F +++ FG+ + + +++ F F S I MI Sbjct: 285 YRYEKGFIYLGMFGVIAVYFGL------LSSLYKPPLLMSFLIFSFAFAASIICFKKMIM 338 Query: 356 KKY 358 +Y Sbjct: 339 SRY 341 >gi|311694208|gb|ADP97081.1| permease YjgP/YjgQ family protein [marine bacterium HP15] Length = 345 Score = 85.8 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 48/352 (13%), Positives = 122/352 (34%), Gaps = 12/352 (3%) Query: 9 LRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFC 68 +R +G + + + ++ + + + ++ + ++ + + L +P + P Sbjct: 1 MRSVGGAMFLVMMVVLSLDLIFAFIAELDDIRNNYQ-ILDALWYVFLTLPRRIYDYLPLG 59 Query: 69 FAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRST 128 M L SM ++EL ++ G S ++ + A+++ + + + P Sbjct: 60 AFMGCLVGLGSMASSSELTVVRAAGVSLKRIVWSAMKPALVIVVLGVLIGEYLAPPAERV 119 Query: 129 IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI--FIVDSRDTQTHKI 186 + A A A + ++ + D YI ++ PN L G+ F D D Q Sbjct: 120 AQSYKAVALGAGSNVASASGVW-HKEGDSYIHLNAVQPNGVLHGVSRFQFDD-DRQLLAA 177 Query: 187 YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 +A+ D +L + + + S +++K + + Sbjct: 178 SFAERAIYQGDH--WLLENVRTTSFEDDRTVRVDDRTLRWETGLSPGVLSVLIVKPENLS 235 Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 ++ L + Y F K+ L + L++I +R Sbjct: 236 MTGLYT-YATYLGEQSLNASRYWLAFWKKALMPLGTAVMVLVAISFIFGP--LRSVTMGF 292 Query: 307 PIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY-LFLFCISSIFLLMIKKK 357 +F L + + ++ + + P+L L +S++ ++ ++ Sbjct: 293 RVFTGLLVGLLFKYMQDFL-GPMSLVYGFNPMLAVLVPIAVSAVAGGILMRR 343 >gi|225619415|ref|YP_002720641.1| Permease [Brachyspira hyodysenteriae WA1] gi|225214234|gb|ACN82968.1| Permease [Brachyspira hyodysenteriae WA1] Length = 356 Score = 85.8 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 56/357 (15%), Positives = 118/357 (33%), Gaps = 10/357 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+L+ F S L V + + + R++ + E +N + P Sbjct: 1 MKKLNAYLLKEFLSFFFGSLLLFVVLVTIADLSSRLSFYTEHPELINYFITYHLARAPHN 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P +T VL + +N E+L I+N+G S P+ + I L +FL Sbjct: 61 TYYIFPVALMFSSTYVLGTFVKNKEMLAIENSGISLFKFSMPMFIIVIGLCLFLVFFWEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQG-IFIVDSR 179 + + + S F ++ LY + + +Q I + Sbjct: 121 VAAPLNKVSFAANDAMRGREQVSKSGPWQLFGGNNHLYFIETYFYKEQYMQNTIIVKLDD 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 D + + + + + DG + S +K+I + K +Y L Sbjct: 181 DGGIQFRVSSPHIQWNNEDRKWYVMDGILTTFS-ENKEIKVEKVNNYPLDLLERPEHFYG 239 Query: 240 LKAND-QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 D +LS + ++ H R++ + +I ++A+ Sbjct: 240 RPPLDAMSLSEESHIIKLQKEV-NMNTSKLETDLHYRIS---YCFSGFIIVLLASLFSKF 295 Query: 299 VRQRKKIHPIFISLSISFGVF---WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 Q + + + + ++ + F + + N + + +F I I Sbjct: 296 STQSVLVVSLVMVIIVALLYYSILMVFRSMGEAGDINAFIAAWMPNIIFAILCILAF 352 >gi|307543949|ref|YP_003896428.1| permease [Halomonas elongata DSM 2581] gi|307215973|emb|CBV41243.1| K07091 [Halomonas elongata DSM 2581] Length = 354 Score = 85.8 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 40/355 (11%), Positives = 102/355 (28%), Gaps = 5/355 (1%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + YI R + + L+ + ++ + VI + + V +L + + +P Sbjct: 5 RLDRYIARNVLGAILVVQVVLLGLDLVITYINDLGDVEGDYGALQVFFYLV-MRLPWRFY 63 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + L M + EL ++ G S ++ V+ IL+ + + Sbjct: 64 QYAPVGVLIGALIGLGGMASSNELTVMRAAGRSLARILWGVMKPVILVIAVVLFIAEFVS 123 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + E + R D Y + +N + + + Sbjct: 124 PSTEQYASAWRLEKMQGEGAVLTERGGWQREGDSFY-RFGAIRVDNVVLDLTRYRFEGRE 182 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + A+ +L + ++ R +++ + + + A + ++ + Sbjct: 183 LREAVSARRAVWRDG--GWVLENVDITRFVDGRTEVTHQATRPWQTELTPAELNRLLRRV 240 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 Q S L + + F +++ L L++ Sbjct: 241 ETQAPSELWAH-ARYLEAQGQDATQPLLYFWQKMLMPLTMASLMLVAASFVFGPLRSVAA 299 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + F + +L L C + F ++ + Sbjct: 300 GTRVFYGVITGLVFKYLQDLLGPASTVFGFSPAWAVLAPTLICAALGFYMLRRSG 354 >gi|226357375|ref|YP_002787115.1| membrane protein; permease [Deinococcus deserti VCD115] gi|226319365|gb|ACO47361.1| putative membrane protein; putative permease [Deinococcus deserti VCD115] Length = 347 Score = 85.8 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 57/362 (15%), Positives = 114/362 (31%), Gaps = 24/362 (6%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 ++LR + R + + + + + + + L + G ++PT+L Sbjct: 3 SILTRFVLREVLRWYAAGAALFLTLQMTDVLSTTVAKLLTYDPPLWKAVAAFGAILPTIL 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + M R++E I G ++L+ P+L ++ + + + Sbjct: 63 NRTLVLAVPFAILLAFSRMQRDSEFKAILAAGVRPLSLVWPLLAPFAVVGLIAGYNAGTL 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN----TLQGIFIVD 177 P + + +E+ F LY N L G+ + Sbjct: 123 VPAGLKQWDRAWYRIYEQTPPPPTQEHYTFAPAGALYYASRIVNAKGGDRAELTGVMVQ- 181 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHR--KSPISKDISIMKFKSYTLQTESANS 235 + + A SG D + L + V R + P K +++ + TLQ A Sbjct: 182 ----RGEETLTATSGVWDAKARTWTLQNAWVVRPGQPPRQKTGALVLPQRDTLQPPPAEG 237 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + L L+P Y+ + R+ + PV+F L A Sbjct: 238 KQLSNAQLRAGLKRELSPAQ---------RRDYQYQLATRVADPVTPVVFAL---AAGAL 285 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFS-YIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 L+R R + SF + W + + +P L F + + L Sbjct: 286 GLLIRSRATAFAAVLVFIASFYILWSTAPQLARAGAMDPALAAWLPNLTFLLLAGVLAWR 345 Query: 355 KK 356 + Sbjct: 346 LR 347 >gi|313682233|ref|YP_004059971.1| permease yjgp/yjgq family protein [Sulfuricurvum kujiense DSM 16994] gi|313155093|gb|ADR33771.1| permease YjgP/YjgQ family protein [Sulfuricurvum kujiense DSM 16994] Length = 340 Score = 85.8 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 59/358 (16%), Positives = 136/358 (37%), Gaps = 18/358 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YIL + F L + IA VI +++ + +L+ + K+ +++P + Sbjct: 1 MDKLRRYILSNLSILFFSIFLPLFAIASVIFMIKLATYTAVIQITLSEMAKLYLFVVPEL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P F + L ++ + E++++ + G S + + + + A+LLS+ LF++ + Sbjct: 61 LFYTLPIAFVVGGALALYRLSNDNEMVVVFSLGISPLFVARILAVPALLLSLLLFVNFVV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + K + F+ L + F D + I+K +P + + G I+ ++ Sbjct: 121 VTPYIKIISANFLEKKRAEAKFN-LGASEFGHHFGDWMLFINKNDPQSRVFGDVILFNKS 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + A + + + L S + + M FK+ + + + + Sbjct: 180 MKDEILIKADKAELINKQGVLQLRLDNGVSYSYDNILLRTMLFKTGYINDKLSTDPMVYR 239 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 D + L +R +F LIS+ +V Sbjct: 240 NTLDYWTNNELRERKT-----------------QRFITNTLLSLFPLISVFLMIALGIVH 282 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 R + I++ L +S F+ + I + + ++L S + ++ ++ Sbjct: 283 ARHQKRWIYLWLFLSIVGFYAAAIITQQWLGFHTIWVVTLVWLIITYSFYKRLVGSRF 340 >gi|300718280|ref|YP_003743083.1| permease [Erwinia billingiae Eb661] gi|299064116|emb|CAX61236.1| Predicted permease [Erwinia billingiae Eb661] Length = 361 Score = 85.8 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 41/336 (12%), Positives = 113/336 (33%), Gaps = 19/336 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R I F + ++ + ++ ++ V+ L + +P Sbjct: 1 MTIFSRYLMRNIFIGFAAAAGLLIPLFTTFNLINELDDVAPGGYRWTQALLVVVMTLPRS 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + PF + L ++++ EL I G S + + + +++++ L + Sbjct: 61 LVDLAPFIALLGGIVGLGQLSKSLELTAIRTAGFSISRIARVMFCAGLVMTLTLGAVDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SR 179 + + Q+ A N + D ++ + + N GI I Sbjct: 121 VAAPLQQRALQIKNVAMAKAESDSDAGNALWARSQDDFVTVQSLDNRNQPVGIEIFSWQP 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK-------FKSYTLQTES 232 D +AQS +I + L++ R + ++ + F L+ + Sbjct: 181 DLTLKSYIFAQSATI-AGKGMWTLHNVTEKRWDKQQETVNNLPEMQWHSLFSGEDLKRLT 239 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + + + + +L + + Y S ++ + + + L+++ Sbjct: 240 LPAESFSARQLADYIVYL--------HKTGQPSLEYESALWQKAGRPILILAMILLAVPF 291 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHK 328 + R + + + + + + +++ Sbjct: 292 --TFSTPRAPGLGSRLALGVIVGLVTWIVYQIVLNL 325 >gi|319760185|ref|YP_004124123.1| putative permease [Candidatus Blochmannia vafer str. BVAF] gi|318038899|gb|ADV33449.1| putative permease [Candidatus Blochmannia vafer str. BVAF] Length = 371 Score = 85.8 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 63/335 (18%), Positives = 123/335 (36%), Gaps = 31/335 (9%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 YI++ + R+ L+ + + + + Q L +I V + I L ++ IP + Sbjct: 2 ILIRYIIKEVFRNQLIILILLFLVC-ICQKLIKIVGVDNPIPVYLIFLHLT-LNIPELGK 59 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V PF + + + E+L + + +R +K + +I++ I I+ + Sbjct: 60 LVIPFSLFLSVFITCYRFHLHNEILAMYSCAINRFFFVKSIFLYSIIVFIISLINVMWLS 119 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS---- 178 P C + + L E F + + K N LQ IFIV Sbjct: 120 PYCEQLRYVTLSSINKNIYSIKLVEKKFLLMLSKHTVFFIKKIKNKNLQYIFIVKKNHHI 179 Query: 179 RDTQTHKIYYAQSGSI---DLDRQAIILNDG---EVHRKSPISKDISIMKFKSY-TLQTE 231 + I A +G + + +AI L G E+H I +I I F Y TL Sbjct: 180 NGSNVCVIITANNGDVYNYSNNLKAITLKSGTYYEIHYDQLIFTNIYISDFSRYHTLIDY 239 Query: 232 SANSSTIVLKAND-QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 + S K + +S L+ + Y E + R T + +I +I++ Sbjct: 240 NMKSPQKGFKIVEHMTISQLICHDSLPEKY---------IELNWRFTLLVSIIIMPIIAL 290 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYI 325 + + F++ ++ ++ F + Sbjct: 291 LLVI--------NISNGYFLNFVLAISLYILFFML 317 >gi|92117864|ref|YP_577593.1| permease YjgP/YjgQ [Nitrobacter hamburgensis X14] gi|91800758|gb|ABE63133.1| permease YjgP/YjgQ [Nitrobacter hamburgensis X14] Length = 365 Score = 85.8 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 55/365 (15%), Positives = 129/365 (35%), Gaps = 24/365 (6%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS----STESLNILLKISGYLI 57 + Y + + I ++ ++ I +V ++ S ++ + S + + Sbjct: 6 NTLGRYFASRFV---VAALGVFASIFLLLVLVDYIEMVRRTSGLASASAIMVAETSLFRV 62 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 P +L +TPFC + +++R EL++ G S I P L A++L + + Sbjct: 63 PQLLEKLTPFCVLIGAMTCYLALSRRLELVVARAAGISAWQFISPALACALVLGVLATTA 122 Query: 118 ENIIEPKCRSTIKQLSAKAQLALTFSYLEE--NLFFR--LDDDLYIKISKYNPNN--TLQ 171 N + R K++ A+ +++ L+E + DD I + + L Sbjct: 123 YNPMSANLRELSKKMEAELFGSVSGGGLQEASGFWINQVTDDGQAIINAARSEQQGVRLT 182 Query: 172 GIFIV-DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT 230 G+ + D+ + A+ +++ R L G R + S + F Sbjct: 183 GLTVFRFDPDSTFRERIEAREATLEDGRW---LFKGVR-RFTLDSPPVEQETFV-LPTSL 237 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 +A + L ++ + YR ++HK + Q ++ ++ + Sbjct: 238 TAAQVRNSFSTPETVSFWQLPGYIRSSESSGFATAG-YRLQYHKLIAQPF--LLAAMVML 294 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF-LFCISSI 349 A+ R + + F ++ S + + + PI + C+ + Sbjct: 295 AASVSLRFFRFGGVQKMVLSGVGSGFLLYV-LSKVTEDLSKAELMNPIAAAWLPVCVGGL 353 Query: 350 FLLMI 354 ++ Sbjct: 354 AGFLV 358 >gi|299133713|ref|ZP_07026907.1| permease YjgP/YjgQ family protein [Afipia sp. 1NLS2] gi|298591549|gb|EFI51750.1| permease YjgP/YjgQ family protein [Afipia sp. 1NLS2] Length = 360 Score = 85.8 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 54/361 (14%), Positives = 124/361 (34%), Gaps = 21/361 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS----TESLNILLKISGYLI 57 + Y R + S + I ++ ++ I +V + T S ++ + S + + Sbjct: 4 TTLARYFARRFI---IASLAVFLGIFLLLVLVDYIEMVRRTSSIPTASAIMVAETSLFRV 60 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 P +L + PFC + + +++R+ EL++ G S I P L A+L+ + + Sbjct: 61 PQLLEKLMPFCILIGAMSCYLALSRSLELVVARAAGISAWQFITPALVAALLMGVLATVV 120 Query: 118 ENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLD-DDLYIKISKYNPNN--TLQGIF 174 N I + K++ AK +E++ ++ + I + + N L G+ Sbjct: 121 YNPISAAMQERSKEMEAKLFSNGGVQNVEQSWINQVTSEGQSIISAALSQNQGTRLSGVT 180 Query: 175 IV-DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 + + D A +++ + G + I + L+T Sbjct: 181 VFRFNPDGSFRDRIDANEANLEPGEWRL---GGARIHSMTAAPVIQ----DNLLLKTNLT 233 Query: 234 NSSTIVLKANDQNLSFLLNPN-PNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + A + +SF P + YR ++ K L + ++ ++ + A Sbjct: 234 PAQVRNSFATPETVSFWQLPGYIQSSASSGLATAGYRLQYQKLLARPF--LLASMVLVAA 291 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 A R + ++ F ++ + Y C+ + Sbjct: 292 AVSLRFFRFGGVQKMVLSGVAAGFLLYVLSKVTEDLSKAELMYPLAAAWLPVCVGGLTGF 351 Query: 353 M 353 + Sbjct: 352 L 352 >gi|15964906|ref|NP_385259.1| hypothetical protein SMc00583 [Sinorhizobium meliloti 1021] gi|307300976|ref|ZP_07580745.1| permease YjgP/YjgQ family protein [Sinorhizobium meliloti BL225C] gi|307317711|ref|ZP_07597149.1| permease YjgP/YjgQ family protein [Sinorhizobium meliloti AK83] gi|15074085|emb|CAC45732.1| Hypothetical, transmembrane protein [Sinorhizobium meliloti 1021] gi|306896473|gb|EFN27221.1| permease YjgP/YjgQ family protein [Sinorhizobium meliloti AK83] gi|306903931|gb|EFN34517.1| permease YjgP/YjgQ family protein [Sinorhizobium meliloti BL225C] Length = 360 Score = 85.8 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 53/355 (14%), Positives = 119/355 (33%), Gaps = 14/355 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTV 60 + Y + R+ + I + ++I + + +S+ +++ L ++ + IPT+ Sbjct: 4 NTLGRYFFKRYARTTFWFLVGIFALIFIIDFSELTSRMSNLPHYTVSGALLMTTFRIPTI 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L PF L S+NR EL++ G S ++P + A+L + + N Sbjct: 64 LQQTVPFVALFAAMAALISLNRRYELVVTRAAGISVWQFLRPFVVGALLFGVLAVVVINP 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKY---NPNNTLQGI-FIV 176 + + L A+ + + ++ D I N L + I Sbjct: 124 LAAWGTKKAEALEAEWGSTRSAAANSIPWLRQIYDGTDTIIGARSVQNGGTELINVTVIH 183 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 A+S + L +G V + + + M+ + Sbjct: 184 FDPQGAITLRQDAKSAKL---EDGYWLLNGVVE--TEVGRLPRRMETAQLRTNLKPDFVQ 238 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + KA+ L ++FH ++ L V LI+ + K Sbjct: 239 ERLAKADSIQFFDLPR-KIEVARSFGFSTNGLETQFHSLMSLPLLLVAMTLIAACVSLKF 297 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + Q + + I + F ++ + ++ + P + +L + ++ L Sbjct: 298 SRFNQSRSV--ILGGILSGFVLYVV-TVLVKAFGSSGIVPPFVAAWLPVVVAMAL 349 >gi|114766152|ref|ZP_01445156.1| permease, YjgP/YjgQ family protein [Pelagibaca bermudensis HTCC2601] gi|114541612|gb|EAU44654.1| permease, YjgP/YjgQ family protein [Roseovarius sp. HTCC2601] Length = 364 Score = 85.4 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 53/354 (14%), Positives = 128/354 (36%), Gaps = 23/354 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y R FL ++ ++ ++ S S ++ ++ +P+ L Sbjct: 2 ILHRYFARRFLTMFLSILTVFALFLALLDLVDQLRRFGSD-VSFGQVVYLTLLNLPSGLY 60 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + T + M R++EL+++ G S +T + + +A+++S N I Sbjct: 61 EILPLVMILATAALFLMMARSSELVVVRAAGRSGLTALAGPVAVALVISGVSVAILNPIV 120 Query: 123 PKCRSTIKQLSAKAQLALTFSYL--EENLFFR---LDDDLYIKISKYNPNNT-LQGI-FI 175 L+ + + E L+ R + D I+ ++ NP+ T L + F+ Sbjct: 121 AATSRQSSDLTESYKSNGASTISIGREGLWLRQGGDEGDTVIRAARANPDATVLYEVSFV 180 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGE-VHRKSPISKDISIMKFKSYTL--QTES 232 ++ + A+ ++ A +L D + +S S + +F+ L Sbjct: 181 EYEAESGPLRRIEAEEAALQDG--AWVLRDAKAWPLQSGRSPEGMSERFERLELPSDLTQ 238 Query: 233 ANSSTIVLKANDQNLSFL---LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 K + + L + + + E L + +F + ++ Sbjct: 239 DGIRDRFGKPSSVAIWDLPEFIEGLEMAGFSARRHVVWLQME----LARPVF--LVAMVL 292 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 + A R + + ++ + FG+++ ++ + +N PIL ++ Sbjct: 293 VAAGFTMRPARLGRTGLHVLAAVLLGFGLYYVRNF-AQIMGENGQLPPILAAWI 345 >gi|89070357|ref|ZP_01157664.1| putative permease [Oceanicola granulosus HTCC2516] gi|89044004|gb|EAR50179.1| putative permease [Oceanicola granulosus HTCC2516] Length = 366 Score = 85.4 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 60/366 (16%), Positives = 134/366 (36%), Gaps = 16/366 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPTVL 61 Y R SFL + + ++++ N VS + +L ++ P L Sbjct: 2 ILHRYFARRYLTSFLTVSGLFFVLLGAMDLVEQANEVSDEAAARWSDVLALTLLNAPASL 61 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS-RITLIKPVLFLAILLSIFLFISENI 120 + P + T + + R++EL++ G S L+ PVL +A++ ++ L + + Sbjct: 62 YEILPLLVILSTIALFLGLARSSELVVTRAAGRSALHALVAPVLVVALIGAVALAVLNPL 121 Query: 121 IEPKCRSTIKQLSA-KAQLALTFSYLEENLFFR---LDDDLYIKISKYNPNNT-LQGI-F 174 + + ++SA + + A S L+ R + I+ ++ N + T L G+ F Sbjct: 122 VAATSKEYEARVSALEDRGASIVSVDAGGLWLRQGGPEGQSVIRAARANTDGTELSGVTF 181 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE--S 232 I + + + + A+ ++ ++ + + + Y + T + Sbjct: 182 ITFAEEGRPSRRIDARRARLEAGVWRLV-EAKSWPLGDAGVPEAAAEEHDVYEVATSLTA 240 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 A + + L + ++ L + F V LI A Sbjct: 241 AQIRDSFGAPSSIPIWELPR-FIDRLQTAGFSARRHQVWLQTELAKPAFLVAMLLIG--A 297 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIE--QNPYYIPILYLFLFCISSIF 350 A R + +++ +SFG+++ ++ E Q P + L I++ Sbjct: 298 AFTMRHQRGGRTGLMALVAILLSFGLYFLRNFAQILGENGQIPVLLAAWAPPLAGIAASV 357 Query: 351 LLMIKK 356 L++ K Sbjct: 358 ALLLHK 363 >gi|320537761|ref|ZP_08037684.1| hypothetical protein HMPREF9554_02438 [Treponema phagedenis F0421] gi|320145384|gb|EFW37077.1| hypothetical protein HMPREF9554_02438 [Treponema phagedenis F0421] Length = 356 Score = 85.4 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 51/359 (14%), Positives = 125/359 (34%), Gaps = 15/359 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y+L+ + L++ LF + + + + + ++ L +L++ + P Sbjct: 1 MKILQRYLLQIFFPTALVAILFFILLLEIGDLFANLPTYLTNGVGLAPILQVMYFYFPKC 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + ++ EL + +G TL+ P++ L + S+ +F E+ Sbjct: 61 ISFAMPLGVLFAGAYTMGTLYARNELTSVFASGMPIWTLVLPLVILGFIFSVGMFFFEDR 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKY---NPNNTLQGIFIVD 177 + + +L+AK L ++ +++ I ++ N L IV Sbjct: 121 VVIHTQYKKNRLTAKL-LETDKDLSTNDIVVLSENNKIIYSAEVYDAETKNLLNLQIIVR 179 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + D + K+ + + A L V+ S + ++F L + + Sbjct: 180 TDDGEIEKVVT--TAVAIWEGDAWELTKPAVYIFSKNGQ----IQFTD-KLAAKEFTEAP 232 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSE----FHKRLTQWLFPVIFGLISIVAA 293 + N ++ L + + +E +++R + + S+ Sbjct: 233 ENFQRNITSIDELSVSEAATYIQKLKRTGRPYTEELAQYYRRFSFPFTIFLVLFFSVSVG 292 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 + + + ++ + + +P +L +F SIFLL Sbjct: 293 GRFRKNILLMSLLFSLLIATVYYVTEMVTMLLAKWEYISPLAGALLPFLIFTSLSIFLL 351 >gi|85709345|ref|ZP_01040410.1| predicted permease [Erythrobacter sp. NAP1] gi|85688055|gb|EAQ28059.1| predicted permease [Erythrobacter sp. NAP1] Length = 365 Score = 85.4 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 45/312 (14%), Positives = 109/312 (34%), Gaps = 11/312 (3%) Query: 49 LLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAI 108 ++K + IP ++ P+ + T L ++N+N+E++ + G S ++ P+L A Sbjct: 57 IIKYASLRIPQLIARFLPYSVLLATLITLVTLNQNSEVVAMKAAGLSAHQVLAPLLLTAA 116 Query: 109 LLSIFLFISENIIEPKCRSTIKQLSAKAQLALTF-SYLEENLFFRLDDDLYIKISKYNPN 167 ++++ F + + ST+K A + S + N++ D++ S Sbjct: 117 VVALISFAFNERVVTRANSTLKAWEAVEYGPIPEQSGVRANVYLTDGDNILTASSLIGSG 176 Query: 168 N--TLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDI--SIMKF 223 L + +G+ L + + + + ++ Sbjct: 177 EDIELDNVTWYSRAPGGIISEQIKATGA-TYAAPGWRLENPKRFDVGSATTEPIDDVVVG 235 Query: 224 KSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPV 283 + T + + Q+ L + + R+++ RL+ L + Sbjct: 236 EGLT----PEQIDLQSVDPDAQSFWEL-SETIDAYEAAGRRTSEMRAKWWHRLSGPLSAL 290 Query: 284 IFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 + L+ VAA A Q I ++L ++ V + + P ++ F Sbjct: 291 LMPLLGSVAAFGLARSGQLFVRAVIGMALGFAYFVVDNAALAMGSFGGYPPFLAAWAPFF 350 Query: 344 FCISSIFLLMIK 355 + ++I+ Sbjct: 351 LFLLVGETVLIR 362 >gi|330993928|ref|ZP_08317858.1| Lipopolysaccharide export system permease protein lptG [Gluconacetobacter sp. SXCC-1] gi|329758874|gb|EGG75388.1| Lipopolysaccharide export system permease protein lptG [Gluconacetobacter sp. SXCC-1] Length = 371 Score = 85.4 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 60/365 (16%), Positives = 114/365 (31%), Gaps = 26/365 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTVL 61 + LYI R + L F+ + + + + VS+ +++ +I+ IP Sbjct: 6 TLSLYIARQFTGATLAVIAFLTGLITMFDFIDLLRRVSTRPNVPTSLVSQIAFLHIPFAC 65 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF + + R++EL++ G S + + A+L+ + + Sbjct: 66 LEILPFGVLLGGILCFWRLARSSELVVARAAGISAWQFLAGPVICAVLIGAMATTCVSPL 125 Query: 122 EPKCRSTIKQLSAKAQLAL--TFSYLEENL--FFRLDDDLY------IKISK-YNPNNTL 170 + L + L + D+ L I + L Sbjct: 126 SSVMYRRAEALDRQYLRDNNGKSLNLSGGTLWLRQGDNGLVDHGVDIIHARQVRLNGGVL 185 Query: 171 Q--GIFIV-DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 GI I D AQSG + R IL + R + D + +F + Sbjct: 186 HIGGITIFRLGPDDGLLTRIEAQSGYLGGGR--WILEGARMLRPDEMPSD--MGRFTLHA 241 Query: 228 LQTESANSSTIVLKANDQNLSFLLNPN-PNNPNYRPELLETYRSEFHKRLTQWLFPVIFG 286 A + ++ L P N +R F LT + Sbjct: 242 -DLTLAGVEESFASPDTLSVWAL--PGFIRQLNRSGFSTIRHRLHFQSLLTLPVLSGTMA 298 Query: 287 LISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCI 346 L++ A R+ I I ++ F +F S I + + P+L + Sbjct: 299 LVA--AGFSMRPARRGGVIRMISSGVAAGFALF-ALSKIAAQFGETGTLPPVLAAWAPTG 355 Query: 347 SSIFL 351 + + L Sbjct: 356 AGLCL 360 >gi|296114025|ref|YP_003627963.1| putative ABC transporter permease protein YjgP/YjgQ [Moraxella catarrhalis RH4] gi|295921719|gb|ADG62070.1| putative ABC transporter permease protein YjgP/YjgQ [Moraxella catarrhalis RH4] gi|326566094|gb|EGE16251.1| putative ABC transporter permease protein YjgP/YjgQ [Moraxella catarrhalis BC1] gi|326572162|gb|EGE22158.1| putative ABC transporter permease protein YjgP/YjgQ [Moraxella catarrhalis BC7] gi|326573712|gb|EGE23670.1| putative ABC transporter permease protein YjgP/YjgQ [Moraxella catarrhalis O35E] Length = 369 Score = 85.4 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 49/368 (13%), Positives = 115/368 (31%), Gaps = 16/368 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R + + + + + V L ++ + S T +L L Y P L Sbjct: 5 ILPKYVIRSALLAMAGAVVGLWLVQMVFAYLAELDNI-SETYTLTDALLFILYRSPYFLV 63 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + L + ++EL+++ G S ++ + A++ + + Sbjct: 64 QFIPTGTLLGAVIGLGLLANHSELIVMRAAGMSIYRIVSWAMLPAVIFVVISLGVNQFVL 123 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNNTLQGIFIVDSRDT 181 P + A + D+ + IS + L + +D Sbjct: 124 PTANQHAAAIRADTIYDKLITIDGYWSVNHDGDNQDVVYISYADNEGGLGEVKRYQLKDG 183 Query: 182 QTHKIYYAQSG--------SIDLDRQAIILNDGEVHRKSPISKDISIM--KFKSYTLQTE 231 Q A+SG ++ + + + + + K TL Sbjct: 184 QLITALKAKSGVYLPQSDDVMNAQKARYTWQLSGIDEIGIGTSQVQQAHSEGKILTLPIA 243 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS-- 289 + + + D +LS L + L + F ++L + L++ Sbjct: 244 PTDVYLLTKEPEDLSLSSLYAHRQLMAHQGTRSLRHELA-FWQKLLSPFAVLSLVLVASS 302 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 V R+ + + + L S+ + +P + ++ + L ++ + Sbjct: 303 FVFGSLRSQGLGLRVVLALLTGLLFSYLTDLTGFVAL-ATGLSPLLMALVPIVLSAMAGM 361 Query: 350 FLLMIKKK 357 +LL K Sbjct: 362 YLLNRKSS 369 >gi|300690718|ref|YP_003751713.1| permease, predicted YjgP/YjgQ family [Ralstonia solanacearum PSI07] gi|299077778|emb|CBJ50416.1| putative permease, predicted YjgP/YjgQ family [Ralstonia solanacearum PSI07] Length = 398 Score = 85.0 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 38/223 (17%), Positives = 77/223 (34%), Gaps = 14/223 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M +E Y R I F+ ++ + +L + V +L + PT Sbjct: 4 MPVYEKYFARQIYGVFVFILFAVLALFIFFDMLSELGSVVGRYTTLIAFFHVM-LQAPTR 62 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + V + M +E I G + + +A+ L++ ++ Sbjct: 63 VYEVIPVAALISAIYVFSQMASQSEFTIFRVAGLDTRRALLSLFKIALPLALVTYVFGEF 122 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRL-----DDD------LYIKISKYNPNNT 169 I PK +++ +A A + ++ + D ++ + P+ T Sbjct: 123 IGPKSEQFAQKVRLEALGATVSAEFRSGVWVKDRGPARPDGSGGEVTRFVNVGSLQPDQT 182 Query: 170 LQGIFIVD-SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRK 211 ++ + + + D + I AQ S Q LND R Sbjct: 183 IRNLRVYEFDADYRLSSIRVAQQASYQ-GHQRWELNDVTETRF 224 >gi|295134703|ref|YP_003585379.1| permease [Zunongwangia profunda SM-A87] gi|294982718|gb|ADF53183.1| permease [Zunongwangia profunda SM-A87] Length = 407 Score = 85.0 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 31/192 (16%), Positives = 67/192 (34%), Gaps = 15/192 (7%) Query: 75 NVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSA 134 V S N E + ++G S ++ + +L+SI F+ N + P I L Sbjct: 1 MVFGSFAENYEFAAMKSSGISLQRAMRGLTLFIVLVSITAFVFANNVIPAAEFKIINLRK 60 Query: 135 KAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT--LQGIFIVDSRDTQTH-KIYYAQS 191 + +F + ++ IK+ K + +N L + I + + ++ Sbjct: 61 NIAKMKPAMAITAGVFNEV-GNINIKVDKKSGDNDQYLHDVIIHTGTERGGDYTVIKSKE 119 Query: 192 GSIDLDRQ----AIILNDGEVHRK-------SPISKDISIMKFKSYTLQTESANSSTIVL 240 G + +++L DG +R+ K F+ YT + + + + + Sbjct: 120 GELVSSEGSNVLSLVLTDGNYYREVQPSDYSKRDHKPFMKSYFEEYTKNIDLSELNQVDM 179 Query: 241 KANDQNLSFLLN 252 +L Sbjct: 180 DDESYTTQSMLR 191 Score = 41.5 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 18/131 (13%), Positives = 45/131 (34%), Gaps = 7/131 (5%) Query: 222 KFKSYTLQTESANSSTIVLKANDQNLSFLLNP---NPNNPNYRPELLETYRSEFHKRLTQ 278 FK L ++N S ++ + + ++ L Y H++ Sbjct: 240 SFKHSILDNYNSNQSQRIVDDAIRTTNAAISHLSIKKQEFKQSSRRLNKYEIALHEKYVL 299 Query: 279 WLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 + ++ V A A++R+ P+ I++ I + + + E + P Sbjct: 300 AVACIVLF---FVGAPLGAIIRKGGMGLPMVIAIIIFLSYHFIGIFAKNSAE-DGSISPF 355 Query: 339 LYLFLFCISSI 349 + +L + + Sbjct: 356 IATWLSTLIML 366 >gi|255322347|ref|ZP_05363493.1| ribonuclease PH [Campylobacter showae RM3277] gi|255300720|gb|EET79991.1| ribonuclease PH [Campylobacter showae RM3277] Length = 341 Score = 85.0 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 65/357 (18%), Positives = 133/357 (37%), Gaps = 29/357 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+ +F + I ++ +Q + S + L K+ +++P V Sbjct: 1 MDRTARYLFSNFLGTFASLFATLFLIMSIVFFIQIARITSYIEITFIELFKLYMFMLPRV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P F + + ++R E +++ G S + + K L ++ +SIFL ++ I Sbjct: 61 LLFTVPIAFFVSLALMFFRLSRENESIVLFTLGYSPVRIAKFFLIVSGAVSIFLIVTAII 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS--KYNPNNTL-QGIFIVD 177 + P + + + + L+ F + D + I K + N TL +G+ + Sbjct: 121 LIPTA-AELNSNFVSYKKTVAKLNLKTTEFGQKFSDWMVFIQNEKSDENGTLYEGVTLY- 178 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAI--ILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 S H+ A++ + + + L++G+++ +D S K T++ +A Sbjct: 179 SPKEGAHRFVLAKNARLTNNNAVLEFTLSEGKIY----DMRDASWHKTDFGTMKISTAQE 234 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 ++ + ++ + R + TY LFP+ L ++ Sbjct: 235 DSVAQTKSFVQYWQAMSEDKK----RAKDFATYVL-------IALFPLATTLFALSLGI- 282 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 R K I FGV +G+ +I + LF I+SIF Sbjct: 283 -VTYRYEKGFVYFGI-----FGVLFGYFTLIMLFSSRVFIAIAAIFLLFFIASIFSF 333 >gi|149927924|ref|ZP_01916174.1| YjgP/YjgQ like transporter [Limnobacter sp. MED105] gi|149823363|gb|EDM82596.1| YjgP/YjgQ like transporter [Limnobacter sp. MED105] Length = 401 Score = 85.0 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 50/376 (13%), Positives = 117/376 (31%), Gaps = 31/376 (8%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y + ++ + V + ++ ++ +S S +P + + P Sbjct: 14 YFRSELYKAISFVMVAFVGLFAFFDLIAEVDRLSLPGTSWFYYFVAVLLGLPARVYEIAP 73 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + + L + ++EL + G S +++K ++ +A + + + + P Sbjct: 74 IAALIGSIYALVQLAASSELTAMRAAGLSTTSMLKMLVRIAAGVVVITVLFGEAVAPLAE 133 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLD--------DDLYIKISKYNPNNTLQGIFIVD- 177 + AKA + R ++ +N + L + + Sbjct: 134 RAAVPMRAKALGYEVDRDFRSGYWMRDTYSAPDAESRVRFVNFDSFNKDGELLKLEYYEL 193 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRK----------SPISKDISIMKFKSY- 226 +++ A+S D D L + V R + I +F+S Sbjct: 194 DPESRIRAWVRAESAKFDPDSGDWELRNVLVQRYFDEAVSNANAARAGLTIQASEFESLE 253 Query: 227 ----TLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFP 282 T + + ++ + + L N + + + + F K++ Sbjct: 254 TMRWTSNLSPELLTGLFVRPDRMSAWQLYNYSKF-LSSNLQATDNIDLAFAKKIMYPFAI 312 Query: 283 VIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFW---GFSYIIHKIEQNPYYIPIL 339 +I +IS+ A R +F + I G FS++ P+ L Sbjct: 313 LIMMMISLPFA--YLHFRSGSVSVKVFAGVMIGVGFHLVNNLFSHLSMVASFPPFVSAAL 370 Query: 340 YLFL-FCISSIFLLMI 354 L F + L + Sbjct: 371 PSLLGFVVGMGALWWV 386 >gi|90419501|ref|ZP_01227411.1| conserved hypothetical membrane protein [Aurantimonas manganoxydans SI85-9A1] gi|90336438|gb|EAS50179.1| conserved hypothetical membrane protein [Aurantimonas manganoxydans SI85-9A1] Length = 360 Score = 85.0 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 43/355 (12%), Positives = 109/355 (30%), Gaps = 22/355 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y R SFL + L + + ++I +++ S +P+ + Sbjct: 5 TLNRYFFRLYVVSFLSTLLTVFALIYLIDLIEVSRRSRFEDLGFGATALFSLLRVPSFIG 64 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 PF + L ++NR EL++ +G S ++ P + + L+ I N + Sbjct: 65 QAFPFIVLFSSIYTLLTLNRRLELVVARASGVSIWQILLPFVVGSFLIGIVATFVYNPLT 124 Query: 123 PKCRSTIKQLSAK-------AQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI 175 ++ + + + +E + + T+ G Sbjct: 125 AYTKTLSEDMQTTMTAGGDVSSSDRVPWLRQEGDGIQSILG----AKTVARSGTVLGDIT 180 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + + + L+ + +L V R + Y L T Sbjct: 181 AFVMNDEGIVKERIDAARAVLNDEYWLLEKPRVTRVGYRPEFPQ-----EYKLPTSLRPE 235 Query: 236 --STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + ++ L + + +R ++H + Q + L++ A Sbjct: 236 YVEQRIADPEAISIWQL-GSKIDVAASLGFNTDAFRMQYHTLVAQPALFIAMTLLA--AT 292 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 R + I + F ++ +++ + N P++ + +++ Sbjct: 293 VATRFSRTGQSGRTIAGGVMAGFVLYVV-TFLAKALGSNDVVPPVMAAWFPVLAA 346 >gi|187922983|ref|YP_001894625.1| permease YjgP/YjgQ family protein [Burkholderia phytofirmans PsJN] gi|296162275|ref|ZP_06845069.1| permease YjgP/YjgQ family protein [Burkholderia sp. Ch1-1] gi|187714177|gb|ACD15401.1| permease YjgP/YjgQ family protein [Burkholderia phytofirmans PsJN] gi|295887429|gb|EFG67253.1| permease YjgP/YjgQ family protein [Burkholderia sp. Ch1-1] Length = 382 Score = 85.0 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 50/382 (13%), Positives = 128/382 (33%), Gaps = 26/382 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRIYERYFARQIYLTFIFILFAFSGLFFFFDLINELNSVGHGNYKFQYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + I L + ++ + Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEYTIFRVSGLATNQALRSLLKIGIPLVLLTYLIGEV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRL-----DDD----LYIKISKYNPNNTLQ 171 + P +++ +A + S E ++ + D ++ + + P+ T+ Sbjct: 121 VGPYTDQLSERVRLEALGSSVSSNFESGVWVKDTLTARADGEQVTRFVNVGELKPDATIS 180 Query: 172 GIFIVD-SRDTQTHKIYYAQSGSID-LDRQAII-LNDGEVHRKSPISKDI---------- 218 + I + + + A+SG + + D ++ P Sbjct: 181 NVRIYEFDSKFRLSNVRTAKSGKYQPPGHWQLTGVTDTQLIDVPPPPGTPADALNPVYRA 240 Query: 219 SIMKFKSYTLQTE-SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLT 277 + Y+L++E + +++L + D+ F L + + + Y ++L Sbjct: 241 KEVAVPEYSLRSELTPQILSVLLVSPDRMSMFNLFRYIQHLTENHQDTQRYEIALWRKLL 300 Query: 278 QWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP 337 + ++S+ A R +F + + + H N + P Sbjct: 301 YPFAVFVMLVLSLPFA--YLHTRAGVVGMKVFGGIMLGMSFQLFNTLFSHIGTLNTWPAP 358 Query: 338 ILYLFLFCISSIFLLMIKKKYT 359 + + + L ++ K+ Sbjct: 359 LTAATP-GLVYLVLGLVGLKWV 379 >gi|28198044|ref|NP_778358.1| hypothetical protein PD0108 [Xylella fastidiosa Temecula1] gi|182680671|ref|YP_001828831.1| permease YjgP/YjgQ family protein [Xylella fastidiosa M23] gi|28056104|gb|AAO28007.1| conserved hypothetical protein [Xylella fastidiosa Temecula1] gi|182630781|gb|ACB91557.1| permease YjgP/YjgQ family protein [Xylella fastidiosa M23] gi|307579132|gb|ADN63101.1| permease YjgP/YjgQ family protein [Xylella fastidiosa subsp. fastidiosa GB514] Length = 368 Score = 85.0 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 52/377 (13%), Positives = 127/377 (33%), Gaps = 29/377 (7%) Query: 1 MKSF----ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYL 56 MK F + Y+ R + + L++ L ++ + V + + + S + Y Sbjct: 1 MKLFPCLHDRYVARAVVATVLLTWLVLLGLDVVNGFASEVRDIGKGSYSFGHAIAYIAYT 60 Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 +P + P + L + +EL + G SR L V+ + + + + + Sbjct: 61 VPRRAYTLFPTAAVIGMLLGLGQLAATSELTALRALGVSRTRLSLSVMMMIGMGTGLMVL 120 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS-----KYNPNNTLQ 171 + + P ++ L A A+ + + F+ + ++++ + + + Sbjct: 121 TGETLGPWAQAQADILKASAKYKSDMTGARYSGFWAREGEVFLNARSGEEKRLDSGGIM- 179 Query: 172 GIFIVDSR----DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 + + D R ++ ++ + IL +V R + + + F S Sbjct: 180 -LILHDVRLYQLAADGRLQSMTRAARVEHHQDVWILQ--QVQRDTFSERGVQRETFDSLP 236 Query: 228 LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPEL---LETYRSEFHKRLTQWLFPVI 284 ++ + A +NLS + + YR + ++ R W +PV Sbjct: 237 WRSRLDPAVLAAGLAKPRNLSA--HELVQSIEYRRRNHLDARDFEGQYWSR---WFYPVN 291 Query: 285 FGLISIVAAD-KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ--NPYYIPILYL 341 + + A L+R F+ + + FW +I Y L Sbjct: 292 VLALCLAAIPFSFGLLRSGGMGKRTFLGILFALS-FWMLQMFFERIASVLKLNYQIFYLL 350 Query: 342 FLFCISSIFLLMIKKKY 358 + + ++++ Sbjct: 351 PPMVMLCGSYWLFRRQH 367 >gi|148244955|ref|YP_001219649.1| permease [Candidatus Vesicomyosocius okutanii HA] gi|146326782|dbj|BAF61925.1| permease [Candidatus Vesicomyosocius okutanii HA] Length = 360 Score = 84.6 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 55/322 (17%), Positives = 127/322 (39%), Gaps = 13/322 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK LYI++ + L+ L + + L + + ++ K IP V Sbjct: 1 MKILTLYIVKTMAFYTLIVMLVWIGVYSFFNFLDEVKFIGQYNYTVFEATKYIILNIPAV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + + + LT++ ++L+II ++G S + + V+++A++ + + + Sbjct: 61 MYSHSSVIILLGSLLALTNLASTSQLVIIRSSGVSIMQISNIVVWVALMFIAIIILIGEL 120 Query: 121 IEPKCRSTIKQLSAKA-QLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P + L +KA + +T +E F+ D+ L+I + K + Q I + R Sbjct: 121 VAPITTEYAECLRSKALEQNMTCRNQQE--FWLKDNGLFIHVKKDFDAKSFQDITFIKLR 178 Query: 180 DTQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK---FKSYTLQTESANS 235 I Y+ + + + + + + +H + + +++ F+ Y++Q Sbjct: 179 APGVLDSIIYSDNATFNGNNLEL---NKPIHYQLSKNGELTTFSKNYFEKYSVQISFNQK 235 Query: 236 STIVLKANDQNLS-FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 LK + + LS + L + + + E +KR + + +I Sbjct: 236 LIKNLKKDPRKLSTWHLYKQMSFLTNNNLVADIVEIEIYKRFMMPVT--LVAMILFSMLF 293 Query: 295 KRALVRQRKKIHPIFISLSISF 316 +R IF+ L +S Sbjct: 294 VFGSLRDASLGKKIFLGLMMSL 315 >gi|163792837|ref|ZP_02186813.1| Predicted permease [alpha proteobacterium BAL199] gi|159181483|gb|EDP65995.1| Predicted permease [alpha proteobacterium BAL199] Length = 365 Score = 84.6 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 47/333 (14%), Positives = 98/333 (29%), Gaps = 31/333 (9%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + YI R L + I+ I +++ +++ + S +L++++ +P + Sbjct: 6 TLSTYIGRQFVFWVLGTFAAIMAIVFLLDLIELLRRGSGKDGAHFGVLVEMAALKLPNMG 65 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF + T + R EL++ G S + P + +A+LL N I Sbjct: 66 QQILPFAVLFGSMLAFTRLTRTNELVVARAAGISVWQFLMPAIAVALLLGALKVGVVNPI 125 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS------------KYNPNNT 169 + L S++ L+I+ + Sbjct: 126 SSVMTARFNVLEDTILRNRVDSFMTVGQ-----GGLWIRERTESGQHVVHALAARQNDAE 180 Query: 170 LQGIF-IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 L + I + + + A++ + L+D V + + Sbjct: 181 LANVLVIRFGHNDEFLERIDARTARL--GAGYWELHDTVV---TSVKGRPDQRGSIRIPT 235 Query: 229 QTESANSSTIVLKANDQNLSFL--LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFG 286 + N + L N + Y H L L + Sbjct: 236 RLTIQNIQDSFASPETMSFWELPGFIRILENAGFSAVKHRLYW---HALLASPLLLIAMV 292 Query: 287 LISIVAADKRALVRQRKKIHPIFISLSISFGVF 319 LI+ A L R+ + L F ++ Sbjct: 293 LIA--ATFSLRLTRRGGTLLWASSGLFTGFLLY 323 >gi|296125162|ref|YP_003632414.1| permease YjgP/YjgQ family protein [Brachyspira murdochii DSM 12563] gi|296016978|gb|ADG70215.1| permease YjgP/YjgQ family protein [Brachyspira murdochii DSM 12563] Length = 356 Score = 84.6 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 52/356 (14%), Positives = 114/356 (32%), Gaps = 8/356 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+L+ F S L V + + + R++ + E +N + P Sbjct: 1 MKKLNAYLLKEFLSFFFGSLLLFVVLVTIADLSSRLSFYTEHPELINYFITYHLARAPHN 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P +T VL + +N E+L I+N+G S P+ + I+L + L Sbjct: 61 TYYIFPVALMFASTYVLGTFVKNKEMLAIENSGISLFKFSMPMFVIVIMLCLILVFFWQF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQG-IFIVDSR 179 + + + S F ++ LY + + + I + + Sbjct: 121 VAAPLNKVSFAANDAMRGNKQASKSGPWQLFGGNNYLYFIDTYFYQEQYMTNTILLKMND 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 D + + D + + +G + S +K+I + + +Y L Sbjct: 181 DGGIKFRISSPYIQWNNDDKKWYVKNGILTTFS-ENKEIEVKEINNYPLDVLERPEHFYG 239 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 D ++ H R++ + +I ++A+ Sbjct: 240 RPLLDSMSLTEEAHIIKLQKEVNMNTSRLETDLHYRIS---YCFSGFIIVLLASLFSKFS 296 Query: 300 RQRKKIHPIFISLSISFGVF---WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 Q + + + + ++ + F + NP+ + +F I I Sbjct: 297 TQSVLVVSLVMVIIVALLYYSILMIFRSMGEAGNMNPFIAAWMPNIIFAILCILAF 352 >gi|126663512|ref|ZP_01734509.1| hypothetical protein FBBAL38_09189 [Flavobacteria bacterium BAL38] gi|126624460|gb|EAZ95151.1| hypothetical protein FBBAL38_09189 [Flavobacteria bacterium BAL38] Length = 156 Score = 84.6 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 57/135 (42%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL+ +F + + + I I + +++N + L +L G Sbjct: 1 MKIIDKYILKRYLVTFSVMLIMFIPIGITIDVSEKVNKMIEKKIPLTDILVYYGDFTVYF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + + + NTE++ I ++G S ++P ++ A+++SIF + Sbjct: 61 ANLLFPIFLFLSIIWFTSKLANNTEIIAILSSGISFARFLRPFIYGAVIVSIFALLMGFF 120 Query: 121 IEPKCRSTIKQLSAK 135 + P+ + Sbjct: 121 LIPQASKGFNDFRYQ 135 >gi|237751254|ref|ZP_04581734.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879] gi|229372620|gb|EEO23011.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879] Length = 342 Score = 84.6 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 46/242 (19%), Positives = 97/242 (40%), Gaps = 7/242 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y+LR IG F + FIA +I +L L + S+ L+++ Y IP Sbjct: 5 LLKKYVLRSIGEMFFPFFFVLFFIASIILLLNIAMLTNGVKLSMIDLMQLYLYGIPANTF 64 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 V F L+ ++ +E+L+ + G S +I+ +L L +L+S L + ++ Sbjct: 65 FVIALTFYSACILGLSKLSYESEMLVFFSLGVSPKDIIRILLPLCVLVSFVLCMFSFVMT 124 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-DSRDT 181 P + K + + L+ F + D + I + N G+ + ++ + Sbjct: 125 PNSKQAYKDFIS-LKKNEINIDLKPGDFGQKIGDWLVYIDSKDK-NVFHGLVLYANTTEQ 182 Query: 182 QTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 A++G I+ + ++L DG+ + + ++FK ++ + Sbjct: 183 IKDNFIIAKTGKIENRQGILELVLYDGDAYFNDKDF--LQKIEFKEMIVRNFLDGTQDSD 240 Query: 240 LK 241 Sbjct: 241 YN 242 >gi|92115032|ref|YP_574960.1| permease YjgP/YjgQ [Chromohalobacter salexigens DSM 3043] gi|91798122|gb|ABE60261.1| permease YjgP/YjgQ [Chromohalobacter salexigens DSM 3043] Length = 354 Score = 84.6 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 48/362 (13%), Positives = 104/362 (28%), Gaps = 24/362 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ YI R + + L+ + I+ + VI + + V +L++LL +P Sbjct: 5 RFDRYIARNVLAAMLVVQVMILGLDLVISYINDLGDVEGDYGALDVLL-YLLMRLPWRFY 63 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + L SM + EL ++ +G S ++ + L+ I + Sbjct: 64 QYAPVGVLIGALIGLGSMASSNELTVMRASGRSLARILWGAMKPLGLVIIVTMAISEWVS 123 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + + E + R DD Y + ++ + + TQ Sbjct: 124 PVTEQYAEAWRLEQLEGEGAILSERGGWQREGDDFY-RFGTIRADDVVIDVTRYHFDGTQ 182 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 +A + DG + + + ++ + Sbjct: 183 LVSATHADRA---------VWEDGSWQWVNVDTTRFED---GRTVVDSQPRQAWETSFTP 230 Query: 243 ND--QNLSFLLNPNPNNPNYRPELLETYRSE-------FHKRLTQWLFPVIFGLISIVAA 293 + L L + +P++ L E F +++ L++ Sbjct: 231 AQLNRLLRPLESQSPSDLWRYASYLGNQGLEATQPLLYFWQKMLLPFTLAGLMLVAASFV 290 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSY-IIHKIEQNPYYIPILYLFLFCISSIFLL 352 I + +SF +P + ++ + I LL Sbjct: 291 FGPLRTVAAGTRVFYGIIVGVSFKYLQDLLAPASMLFGFSPIFAVLVPTVACYVLGIVLL 350 Query: 353 MI 354 Sbjct: 351 RR 352 >gi|254428344|ref|ZP_05042051.1| putative permease, YjgP/YjgQ family [Alcanivorax sp. DG881] gi|196194513|gb|EDX89472.1| putative permease, YjgP/YjgQ family [Alcanivorax sp. DG881] Length = 353 Score = 84.6 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 55/365 (15%), Positives = 108/365 (29%), Gaps = 21/365 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y R + L IV + + + + + + + + L+ P Sbjct: 1 MTLLKRYFWRAVMIPTLAILFIIVGLDCLFGFVYELEFLRGNYQVMEA-LQFILTTTPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 P + T L + + EL +I G S + + VL ++L I Sbjct: 60 FYEYMPMAILLGTLIGLGLLANSGELSVIRAAGVSTLKVSWLVLRPVLVLIILSIPLGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A+ + + R + +I I+ PN L G+ D Sbjct: 120 LTPYSEQVAQSNRSMAEGGGEALRSKYGYWHREGPE-FIHINAVQPNGVLHGLTRYRFSD 178 Query: 181 TQT-HKIYYAQSGSIDLDRQAII------LNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 Q + Y D ++ L D + + L Sbjct: 179 NQKLTETQYVDRAIYQGDFWSLEGIHGTRLFDDHAETYQKDQGE-WQTELTPQLLSIVVL 237 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IV 291 + L + +L +Y F ++L L + LI+ V Sbjct: 238 QPDNLALVKLLEYTRYLKRQGLETADYMLS--------FWQKLFMPLATIGMVLIAISFV 289 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 R + + I L +G + F + +P +L L + ++L Sbjct: 290 FGPLREVTMGLRLTAGIVAGLIFHYGQQF-FGQLSLVFHTDPLLAAMLPPSLCLVLGVWL 348 Query: 352 LMIKK 356 L + Sbjct: 349 LQRVR 353 >gi|91782194|ref|YP_557400.1| membrane protein, YjgP/YjgQ like [Burkholderia xenovorans LB400] gi|91686148|gb|ABE29348.1| membrane protein, YjgP/YjgQ like protein [Burkholderia xenovorans LB400] Length = 382 Score = 84.6 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 50/382 (13%), Positives = 128/382 (33%), Gaps = 26/382 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRIYERYFARQIYLTFIFILFAFSGLFFFFDLINELNSVGHGNYKFQYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + I L + ++ + Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEYTIFRVSGLATNQSLRSLLKIGIPLVLLTYLIGEV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRL-----DDD----LYIKISKYNPNNTLQ 171 + P +++ +A + S E ++ + D ++ + + P+ T+ Sbjct: 121 VGPYTDQLSERVRLEALGSSVSSNFESGVWVKDTLTARADGEQVTRFVNVGELKPDATIS 180 Query: 172 GIFIVD-SRDTQTHKIYYAQSGSID-LDRQAII-LNDGEVHRKSPISKDI---------- 218 + I + + + A+SG + + D ++ P Sbjct: 181 NVRIYEFDSKFRLSNVRTAKSGKYQPPGHWQLTGVTDTQLIDVPPPPGTPADALNPVYRA 240 Query: 219 SIMKFKSYTLQTE-SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLT 277 + Y+L++E + +++L + D+ F L + + + Y ++L Sbjct: 241 KEVAVPEYSLRSELTPQILSVLLVSPDRMSMFNLFRYIQHLTENHQDTQRYEIALWRKLL 300 Query: 278 QWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP 337 + ++S+ A R +F + + + H N + P Sbjct: 301 YPFAVFVMLVLSLPFA--YLHTRAGVVGMKVFGGIMLGMSFQLFNTLFSHIGTLNTWPAP 358 Query: 338 ILYLFLFCISSIFLLMIKKKYT 359 + + + L ++ K+ Sbjct: 359 LTAATP-GLVYLVLGLVGLKWV 379 >gi|103487658|ref|YP_617219.1| permease YjgP/YjgQ [Sphingopyxis alaskensis RB2256] gi|98977735|gb|ABF53886.1| permease YjgP/YjgQ [Sphingopyxis alaskensis RB2256] Length = 366 Score = 84.2 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 60/359 (16%), Positives = 130/359 (36%), Gaps = 30/359 (8%) Query: 12 IGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNI-------LLKISGYLIPTVLPMV 64 +GR FL I+F + ILQ ++L+ S + L + + + G +P ++ Sbjct: 16 VGRLFLFRTFAILFALVL--ILQTLDLLGESGKILAVPGNGDSDVWRYVGMRMPQIIETF 73 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 PF + T + ++N+N+E++ + G S ++ P+ A+L++ F I + Sbjct: 74 LPFSVLLGTILTMVTLNQNSEVVAMKAAGMSAHQVLAPLFLAALLVAGISFAFNERIVTR 133 Query: 125 CRSTIKQLS-AKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN---TLQGIFIVDSRD 180 + + + + S + N++ R DDL I + L+G+ I + Sbjct: 134 STAALGAWQKVEYKRVPVDSGVRSNIWVRDGDDL-INAETVETSGPAVVLRGVTIYERTR 192 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + A S + + + + + + N Sbjct: 193 GVLSSMLSADSARALPGG-GWEMANARRFSRRSGTLEP-------LGTIVAAPNVRPDQF 244 Query: 241 KANDQNLSFL----LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 D + L L ++ ++ + +++ L ++ L+ VAA Sbjct: 245 TLADVDGDELPFLKLKAAIDDLEAAGRPVDALKGVLWHKISGPLSAILMPLLGAVAAFG- 303 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF-LFCISSIFLLMI 354 L R K I +++ F F ++ + + Y P L + F + ++ MI Sbjct: 304 -LARSGKLFVRAIIGMALGFAYFVADNFAL-AMGDLGAYSPFLAAWGPFILFALIGEMI 360 >gi|190572728|ref|YP_001970573.1| putative transmembrane permease [Stenotrophomonas maltophilia K279a] gi|190010650|emb|CAQ44259.1| putative transmembrane permease protein [Stenotrophomonas maltophilia K279a] Length = 368 Score = 84.2 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 52/369 (14%), Positives = 116/369 (31%), Gaps = 23/369 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+LY+ + + + L++ +V + V+ + + +L Y +P Sbjct: 7 RFDLYLGQSVFTTVLLTWAVLVGLDVVMAFSGEFKDIGKNGYTLGHAAAWVLYTVPRRAY 66 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + L + +EL + G SR L V LL+ + +S + Sbjct: 67 TMFPTAAVIGALMGLGQLAATSELTALRALGLSRKRLSVSVAIALSLLTAVMVLSAETLG 126 Query: 123 PKCRSTIKQLSAKAQ-------LALTFSYLEEN-LFFRLDDDLYIKISKYNPNNTLQGIF 174 P + L + A+ + + E F + L+ + Sbjct: 127 PWGQDRADALKSSAKWGRDISTTRYSGLWAREGDTFLSAAGGEEQLVGDKGTRLILRDVR 186 Query: 175 IV----DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT 230 + D R A+ DR +L S + + + + Sbjct: 187 LYRIAEDGRIASLTHADTAEH-----DRDGWVLTGVRRDTFGERSATREEVAREPWNSKL 241 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 ++ +T + K + +++ L + Y + R W +PV + + Sbjct: 242 DAGALATGIAKPRNLSVAEL-RTSIEYRERNGLDARDYEDVYWSR---WFYPVNVLALCL 297 Query: 291 VAAD-KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY-LFLFCISS 348 A +R +F+ + + G + + + I Y L + + Sbjct: 298 AAVPFAFGSLRSGGMGKRLFLGILFALGFWLLQLFFGRMAGALKFDYRIAYALPPIVMLA 357 Query: 349 IFLLMIKKK 357 I L+ ++K Sbjct: 358 ISGLLFRRK 366 >gi|257461390|ref|ZP_05626486.1| ribonuclease PH [Campylobacter gracilis RM3268] gi|257441113|gb|EEV16260.1| ribonuclease PH [Campylobacter gracilis RM3268] Length = 343 Score = 84.2 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 45/243 (18%), Positives = 100/243 (41%), Gaps = 15/243 (6%) Query: 1 MKSFELYILRCIGRSF---LMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLI 57 M + Y+ SF + I+ I + +QI + + + + + L+K+ +++ Sbjct: 1 MDRVQRYLFSNFVGSFASLFSTLFIIMSIVFFLQIARITSFIE---INFSELVKLYLFML 57 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 P +L P F + + L +++ E ++I G + ++ A L S+ L Sbjct: 58 PRILIFTVPIAFFVALSISLFRLSKENETIVIFTIGYATRKIVLFFGISAALCSLALLFV 117 Query: 118 ENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT---LQGIF 174 + P +K + ++ N F + D + I N T + + Sbjct: 118 SLFMMPIA-ENLKDNFIDYKKISATLNIKSNEFGQKFSDWLVFIDSQENNGTSTLYKDLV 176 Query: 175 IVDSRDTQTH-KIYYAQSGSIDLDRQAI--ILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 + + +Q H ++ A+SG + + +L+DG+++ +S +F+S TL+T+ Sbjct: 177 LYNPGGSQDHERMIVARSGEFKNENASFSAMLHDGKIYTMGGDQWHVS--EFESLTLRTQ 234 Query: 232 SAN 234 S Sbjct: 235 SDR 237 >gi|253827767|ref|ZP_04870652.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|253511173|gb|EES89832.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] Length = 314 Score = 84.2 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 112/316 (35%), Gaps = 20/316 (6%) Query: 45 SLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVL 104 S LL + Y +P ++ V P F + T L+ ++ + EL ++ G + +IK Sbjct: 17 SFFELLSLYFYTLPLMIFFVIPLSFFVACTLSLSRLSFDYELPVLFALGMNPSKIIKIFF 76 Query: 105 FLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKY 164 +A L+S LFI ++ P + +Q + + L+ F + D + + K Sbjct: 77 PIAALVSFSLFILSLVLTPLSDTAYRQFLEE-RKNSININLQAGEFGQKLGDWLVYVQKS 135 Query: 165 NPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAI--ILNDGEVHRKSPISKDISIMK 222 +++ + I ++ + + ++ + I + IL G ++R P + + Sbjct: 136 KEDSSYENIVLLSF--AKEGGMIFSDNAKIVNQMGVMEAILEKGSIYR--PKEDFVEKIL 191 Query: 223 FKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFP 282 F + +++ + L + R + S F L Sbjct: 192 FDTLIIRSSITAIDEVDLGVIGYWKRAFYENDRQKKTLRNLSMYVMMSCF------PLVS 245 Query: 283 VIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 + F ++ + + + + G+F+ Y+ ++ Sbjct: 246 LFFF--PLLGVKNPRYQKNYTILQAMGV-----IGIFYALMYLFASYLPLLGMFIFPIIW 298 Query: 343 LFCISSIFLLMIKKKY 358 L +F +IKK Y Sbjct: 299 LLLGYLLFERVIKKYY 314 >gi|58580459|ref|YP_199475.1| hypothetical protein XOO0836 [Xanthomonas oryzae pv. oryzae KACC10331] gi|58425053|gb|AAW74090.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC10331] Length = 396 Score = 84.2 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 51/366 (13%), Positives = 113/366 (30%), Gaps = 21/366 (5%) Query: 5 ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 + Y+ R + + L++ ++ + V + + + + Y +P + Sbjct: 37 DWYVGRVVLSTVLLTWAVLLGLDLVNAFASEAKDIGQGSYTFGHAVAYVAYTVPRRAYTL 96 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P + L + +EL + G SR + V+ LL+ + IS I P Sbjct: 97 FPTAAVIGALMGLGQLAATSELTALRALGVSRKRMSASVVAAMALLTASMVISGETIGPW 156 Query: 125 CRSTIKQLSAKAQ--LALTFSY-----LEEN-LFFRLDDDLYIKISKYNPNNTLQGIFIV 176 ++ L A A+ + S E F + + L + + Sbjct: 157 AQNQADTLKASARYNSDMAASLYAGLWAREGDTFLNALSGEEKLLDGGDTALDLHDVRLY 216 Query: 177 --DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 DS Y A R + +V R + + + F Q++ Sbjct: 217 HLDSSGRMQQLTY-ASVAEHRDGRWTLR----QVRRDTFQERSVQRETFPELPWQSQLNP 271 Query: 235 SSTIVLKANDQNLSFL-LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 ++ A +NLS L + + Y ++ R W +P+ + + A Sbjct: 272 AALAAGLAKPRNLSAHDLEQSIEYRSRNGLDARDYEDQYWSR---WFYPLNVLALCMAAI 328 Query: 294 D-KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-NPYYIPILYLFLFCISSIFL 351 +R +F+ + + G + + Y L + + Sbjct: 329 PFSFGSLRSGGLGKRLFLGILFALGFWLLQLFFGRMAGALKLDYRIAYALPPMVMLGVSA 388 Query: 352 LMIKKK 357 + +++ Sbjct: 389 WLFRRR 394 >gi|150395988|ref|YP_001326455.1| permease YjgP/YjgQ family protein [Sinorhizobium medicae WSM419] gi|150027503|gb|ABR59620.1| permease YjgP/YjgQ family protein [Sinorhizobium medicae WSM419] Length = 360 Score = 84.2 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 57/357 (15%), Positives = 118/357 (33%), Gaps = 18/357 (5%) Query: 2 KSFELYILRCIGRS---FLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIP 58 + Y + R+ FL+ ++FI ++ R++ + T S L ++ + IP Sbjct: 4 NTLGRYFFKRYARTTFWFLIGIFALIFIIDFSELTSRMSNLPHYTVSGA--LLMTTFRIP 61 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 T+L PF L S+NR EL++ G S ++P + A++ + Sbjct: 62 TILQQTVPFVALFAAMAALISLNRRYELVVTRAAGISVWQFLRPFVVGALIFGALAVVVI 121 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKY---NPNNTLQGI-F 174 N + + L A+ + + ++ D I N L + Sbjct: 122 NPLAAWGTKKAEALEAEWGSTRSAAANSIPWLRQIYDGTDTIIGARSVQNGGTELINVTV 181 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 I A+S + L +G V + + + M+ Sbjct: 182 IHFDPQGAITLRQDAKSAKL---EDGYWLLNGVVE--TEVGRLPRRMETAQLRTNLRPDF 236 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + KA+ L ++FH ++ L V LI+ + Sbjct: 237 VQERLAKADSIQFFDLPR-KIEVARSFGFSTNGLETQFHSLMSLPLLLVAMTLIAACVSL 295 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 K + Q + + I + F ++ + +I + P + +L + ++ L Sbjct: 296 KFSRFNQSRSV--ILGGILSGFVLYVV-TVLIKAFGSSGIVPPFVAAWLPVVVAMAL 349 >gi|209885475|ref|YP_002289332.1| permease YjgP/YjgQ [Oligotropha carboxidovorans OM5] gi|209873671|gb|ACI93467.1| permease YjgP/YjgQ [Oligotropha carboxidovorans OM5] Length = 364 Score = 84.2 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 53/361 (14%), Positives = 129/361 (35%), Gaps = 21/361 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLV--SSSTESLNILL--KISGYLI 57 + Y R + SC + I ++ ++ I +V +SS + + + + S + + Sbjct: 8 TTLARYFARRFI---VASCAVFLGIFLLLVLVDYIEMVRRTSSIPTASAFMVAQTSLFRV 64 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 P +L + PFC + + +++R+ EL++ G S I P L A+++ I ++ Sbjct: 65 PQLLERLMPFCILIGAMSCYLALSRSLELVVARAAGISAWQFITPALVSALVMGILATVA 124 Query: 118 ENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLD-DDLYIKISKYNPNN--TLQGIF 174 N I + K++ A+ + ++ ++ + I + + N L G+ Sbjct: 125 YNPISAAMQERSKEMEAQLFSNGGVQDVAQSWINQVTSEGQSIISAALSQNQGTRLSGVT 184 Query: 175 IV-DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 + + D A+ +++ + L ++ + + S+ L T Sbjct: 185 VFRFNPDGSFRDRIDARDANLEPGQ--WRLGGARIYSMTAAP-----IPHDSFLLSTNLT 237 Query: 234 NSSTIVLKANDQNLSFLLNPN-PNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 S A + +SF P + YR ++ K L + ++ ++ + A Sbjct: 238 PSQVRNSFATPETVSFWQLPEYIRSSQSSGLATAGYRLQYQKLLARPF--LLASMVLVAA 295 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 A R + ++ F ++ + + C+ + Sbjct: 296 AVSLRFFRFGGVQKMVLSGVAAGFLLYVLSKVTEDLSKAELMHPLAAAWLPVCVGGLIGF 355 Query: 353 M 353 + Sbjct: 356 L 356 >gi|329850878|ref|ZP_08265723.1| hypothetical protein ABI_37970 [Asticcacaulis biprosthecum C19] gi|328841193|gb|EGF90764.1| hypothetical protein ABI_37970 [Asticcacaulis biprosthecum C19] Length = 380 Score = 84.2 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 51/364 (14%), Positives = 119/364 (32%), Gaps = 20/364 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSST-ESLNILLKISGYLIPTV 60 E YIL+ F + + + + +I ++ V++ +L + P+ Sbjct: 19 SRLETYILQTCVAMFASALMVVSALILLINYVEISRSVAARADLGGLEVLVMLFQRSPSA 78 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ PF F + ++NR +EL+ + G S + P A I N Sbjct: 79 ILILLPFAFLFGSLFAFVNLNRRSELIAMRAAGVSAWRFVLPATVSAFAFGILTIGVLNP 138 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN----NTLQGI--- 173 + + ++ A+ E + D D + I L+G+ Sbjct: 139 VASHLQDVYERKVVAAEAFAPTDPAEAIYLRQGDSDRQVVIRADGQASAQIGHLRGVTFW 198 Query: 174 -FIVDSRD-TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 F D R + A+ + + L D + ++ +++ TL + Sbjct: 199 IFTTDRRGAPSFIERVDAREAILRPG--SWQLKDAREYTLDKPAQFYNVL-----TLSSN 251 Query: 232 SANSSTIVLKANDQNLSFLLNPN-PNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 A+ Q++ F P +Y + H+ L+ L + + ++ Sbjct: 252 LDPQKAFKRYASTQSVPFWRLPGLIRQNQISGFSTTSYELKLHQLLSTPL--MFAAMTAL 309 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 A L+R + +S+ F +F+ + + + ++ + Sbjct: 310 GAVFSLRLMRLGGLTILVTSGVSLGFVIFFVNQLFASMGKADVIPAALAGWSPAVLAMLG 369 Query: 351 LLMI 354 + + Sbjct: 370 AMTL 373 >gi|326559486|gb|EGE09909.1| putative ABC transporter permease protein YjgP/YjgQ [Moraxella catarrhalis 7169] gi|326568201|gb|EGE18283.1| putative ABC transporter permease protein YjgP/YjgQ [Moraxella catarrhalis BC8] Length = 369 Score = 84.2 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 49/368 (13%), Positives = 114/368 (30%), Gaps = 16/368 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R + + + + + V L ++ + S T +L L Y P L Sbjct: 5 ILPKYVIRSALLAMAGAVVGLWLVQMVFAYLAELDNI-SETYTLTDALLFILYRSPYFLV 63 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + L + ++EL+++ G S ++ + A++ + Sbjct: 64 QFIPTGTLLGAVIGLGLLANHSELIVMRAAGMSIYRIVSWAMLPAVIFVAISLGVNQFVL 123 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNNTLQGIFIVDSRDT 181 P + A + D+ + IS + L + +D Sbjct: 124 PTANQHAAAIRADTIYDKLITIDGYWSVNHDGDNQDVVYISYADNEGGLGEVKRYQLKDG 183 Query: 182 QTHKIYYAQSG--------SIDLDRQAIILNDGEVHRKSPISKDISIM--KFKSYTLQTE 231 Q A+SG ++ + + + + + K TL Sbjct: 184 QLIAALKAKSGVYLPQSDDVMNAQKARYTWQLSGIDEIGIGTSQVQQAHSEGKILTLPIA 243 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS-- 289 + + + D +LS L + L + F ++L + L++ Sbjct: 244 PTDVYLLTKEPEDLSLSSLYAHRQLMAHQGTRSLRHELA-FWQKLLSPFAVLSLVLVASS 302 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 V R+ + + + L S+ + +P + ++ + L ++ + Sbjct: 303 FVFGSLRSQGLALRVVLALLTGLLFSYLTDLTGFVAL-ATGLSPLLMALVPIVLSAMAGM 361 Query: 350 FLLMIKKK 357 +LL K Sbjct: 362 YLLNRKSS 369 >gi|326567797|gb|EGE17901.1| putative ABC transporter permease protein YjgP/YjgQ [Moraxella catarrhalis 12P80B1] Length = 369 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 49/368 (13%), Positives = 114/368 (30%), Gaps = 16/368 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R + + + + + V L ++ + S T +L L Y P L Sbjct: 5 ILPKYVIRSALLAMAGAVVGLWLVQMVFAYLAELDNI-SETYTLTDALLFILYRSPYFLV 63 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + L + ++EL+++ G S ++ + A++ + Sbjct: 64 QFIPTGTLLGAVIGLGLLANHSELIVMRAAGMSIYRIVSWAMLPAVIFVAISLGVNQFVL 123 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNNTLQGIFIVDSRDT 181 P + A + D+ + IS + L + +D Sbjct: 124 PTANQHAATIRADTIYDKLITIDGYWSVNHDGDNQDVVYISYADNEGGLGEVKRYQLKDG 183 Query: 182 QTHKIYYAQSG--------SIDLDRQAIILNDGEVHRKSPISKDISIM--KFKSYTLQTE 231 Q A+SG ++ + + + + + K TL Sbjct: 184 QLIAALKAKSGVYLPQSDDVMNAQKARYTWQLSGIDEIGIGTSQVQQAHSEGKILTLPIA 243 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS-- 289 + + + D +LS L + L + F ++L + L++ Sbjct: 244 PTDVYLLTKEPEDLSLSSLYAHRQLMAHQGTRSLRHELA-FWQKLLSPFAVLSLVLVASS 302 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 V R+ + + + L S+ + +P + ++ + L ++ + Sbjct: 303 FVFGSLRSQGLALRVVLALLTGLLFSYLTDLTGFVAL-ATGLSPLLMALVPIVLSAMAGM 361 Query: 350 FLLMIKKK 357 +LL K Sbjct: 362 YLLNRKSS 369 >gi|213423382|ref|ZP_03356370.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 207 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 82/208 (39%), Gaps = 12/208 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + + I++ ++ + + + L + +P Sbjct: 5 GVLDRYIGKTI---FTTIMMTLFMLVSLSGIIKFVDQLKKAGQGNYDALGAGMYTLLSVP 61 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L + + +EL+++ +G +R+ + V+ AI L + Sbjct: 62 KDIQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIG 121 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-- 176 + P+ + A+A + ++ L+ + ++ ++ I + + L GI I Sbjct: 122 EWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNN-FVYIERVKGDEELAGISIYAF 180 Query: 177 -DSRDTQTHKIYYAQSGSIDLDRQAIIL 203 D R + + YA S D + + L Sbjct: 181 NDQR--RLQSVRYAASAKFDPEHKVWRL 206 >gi|297624271|ref|YP_003705705.1| permease YjgP/YjgQ family protein [Truepera radiovictrix DSM 17093] gi|297165451|gb|ADI15162.1| permease YjgP/YjgQ family protein [Truepera radiovictrix DSM 17093] Length = 359 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 44/289 (15%), Positives = 101/289 (34%), Gaps = 22/289 (7%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQR--INLVSSSTESLNILLKISGYLIPT 59 + F LY++R I + ++ + +L + + ++ + Y IP+ Sbjct: 3 RRFSLYLVREILPLYAAGLTALLILLLGAFLLLEGVLADAVARGVGPALVARFLLYSIPS 62 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 M P +T +++++E+ G S + P+L L +L+S FI+ Sbjct: 63 AAAMGLPLALLFAALLGITRLSQDSEIKAGLLLGLSPRQFLTPILLLGLLVSTVSFINNE 122 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 ++ P ++ + + +E FF + + P ++ + ++ Sbjct: 123 LLAPWSYRRAQEALKDILVQSPETLIEAGSFFTDALGRSVYLGSIAPGGVVRDVTVIQPG 182 Query: 180 DTQTHK-IYYAQSGSIDLDRQAIILN--------DGEVHRKSPISKDISIMKFKSYTLQT 230 T + A+SG +D LN DG V +P + + ++ L Sbjct: 183 GTAGPSEVIRAESGVLDEAAGVWRLNGIRMLRYRDGRVVLDAPADEALLPVR----GLSA 238 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQW 279 S+ + + + L NP + + H++ + Sbjct: 239 SSSTPPELTRLPLRELFARLRGTNPQDAPAE-------WTALHRKFAEP 280 >gi|194290553|ref|YP_002006460.1| permease, yjgp/yjgq family [Cupriavidus taiwanensis LMG 19424] gi|193224388|emb|CAQ70399.1| putative permease, YjgP/YjgQ family [Cupriavidus taiwanensis LMG 19424] Length = 392 Score = 83.9 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 56/382 (14%), Positives = 131/382 (34%), Gaps = 44/382 (11%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 ++ +E Y R + F ++ + +L + V++ SL L + PT Sbjct: 4 LRVYERYFGRLVYGVFAFILFAVLSLFVFFDMLNELENVNAQYTSLVALFHVL-LQAPTR 62 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + V + + +E I G + + + LA+ L++ FI Sbjct: 63 VYEVLPIAVLISAIYVFSQLASQSEYTIFRVAGLNTRQALFSLFKLAVPLALVTFIFGEF 122 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD---------LYIKISKYNPNNTLQ 171 I P+ +++ +A A S ++ + D ++ ++ P+ T+ Sbjct: 123 IGPRAEQYAQKVKLEAIGATVSSGFRSGVWVKDRDKDPAGDGEITRFVNVAGLRPDQTIT 182 Query: 172 GIFIVDSRDT-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-------------- 216 GI + + + I AQ G Q+ L + R ++ Sbjct: 183 GITMYEFDPQYRLRVIRVAQEGRYQ-GGQSWELQNVSETRFVELAPHAQGAQPAAATPPR 241 Query: 217 -------DISIMKFKSYTLQTE-SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETY 268 +KF + +E + +++L ++ + L + + + Y Sbjct: 242 DALAPDFRAEQVKFPRVAMHSELTPQILSVLLVTPERMSTLDLFRYIRHLRDNKQDTQRY 301 Query: 269 RSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHK 328 F K++ L + +++ A + + + G+ G S+ H Sbjct: 302 EIAFWKKVIYPLTLFVMVALALPFAYL--------HARAGAVGVKVFGGIMLGLSF--HL 351 Query: 329 IEQNPYYIPILYLFLFCISSIF 350 ++ +L+ + IS++ Sbjct: 352 SNTLFSHVGLLHTWPPIISALV 373 >gi|329114151|ref|ZP_08242913.1| Lipopolysaccharide export system permease protein LptG [Acetobacter pomorum DM001] gi|326696227|gb|EGE47906.1| Lipopolysaccharide export system permease protein LptG [Acetobacter pomorum DM001] Length = 370 Score = 83.9 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 47/365 (12%), Positives = 111/365 (30%), Gaps = 27/365 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTVL 61 + YI R S + + I + + + V++ S N++ +I+ +P Sbjct: 6 TLSRYIARQFVFSVVAMIASLTGIVCLFDFIDLLRRVATKPDVSTNVVTEIAALHVPYFA 65 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF + + R++EL++ G S + + A+L+ + + Sbjct: 66 TEILPFGMLLGGIVCFWRLTRSSELIVARAAGISAWQFLTAPVACAMLIGALFTTLISPV 125 Query: 122 EPKCRSTIKQLSAKAQLALTFSYL---------EENLFFRLDDDLYIKISKYN-PNNTLQ 171 ++L + + + + + + L+ Sbjct: 126 SSSMYRRAEELDQQYLRTGGGPLSLSSGSLWLRQSDSQYDPHGVAMLHARGVQLKDGLLR 185 Query: 172 ----GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 +F +D +D + A G + IL+D V R + + + + Sbjct: 186 IRNVSVFRLDHQD-KLMMRIEAPEGYL--GTLKWILSDASVVRPNDLLHHVGQI---DLP 239 Query: 228 LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLE-TYRSEFHKRLTQWLFPVIFG 286 ++ L P + R +R F L + Sbjct: 240 TDLTVNRVQESFSSPETLSVWAL--PGFISLLDRSGFSSIRHRIHFQSLLALPMLAGTMA 297 Query: 287 LISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCI 346 L++ A R+ I ++ F +F S + + + P+L + + Sbjct: 298 LVA--AGFSMRPSRRGGVARMIGSGVAAGFLLFTV-SKVAEQFGNSGALPPMLAAWAPTL 354 Query: 347 SSIFL 351 + + L Sbjct: 355 AGLCL 359 >gi|312795336|ref|YP_004028258.1| hypothetical protein RBRH_03152 [Burkholderia rhizoxinica HKI 454] gi|312167111|emb|CBW74114.1| Hypothetical membrane spanning protein [Burkholderia rhizoxinica HKI 454] Length = 382 Score = 83.9 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 47/383 (12%), Positives = 133/383 (34%), Gaps = 28/383 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y+ + + +F + + ++ +N V + + P+ Sbjct: 1 MRLYERYLAKQVYLTFAFILFAFSGLFFFFDLISELNAVGHGNYKFSYAVLRVMLQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M ++E I +G S + +L + + + + F+ I Sbjct: 61 FYEIIPVAALISAIYVFAQMAASSEFTIFRVSGLSTHRALGSLLKIGVPIVVLTFVIGEI 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFR---LDDDLY------IKISKYNPNNTLQ 171 I P +++ +A + S + ++ + + + + + P+ T+ Sbjct: 121 IGPYTDQLSERVRLEALGSSVSSNFQSGVWVKDTVPGNGATAQVTRFVNVGELKPDATIS 180 Query: 172 GIFIVD-SRDTQTHKIYYAQSGSIDLDRQAII--LNDGEVHRKSPISKDIS--------- 219 + I + + + AQSG Q ++ + + ++H +P + Sbjct: 181 NVRIYEFDSQFRLADVRTAQSGRYMRPGQWLLKGVTETQLHDVAPAAATAKDVLNPVYKS 240 Query: 220 -IMKFKSYTLQTESANS--STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRL 276 + Y +++E S +++ + +++ L + + + + Y +++ Sbjct: 241 AQVSMPEYPMRSELTPQILSVLLVAPDRMSMTNLFS-YVQHLRENHQDAQRYVIALWRKV 299 Query: 277 TQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 ++ ++S+ A I L +SF +F I + N + Sbjct: 300 LYPFAVLVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLFNTLFSHIGTL--NTWPA 357 Query: 337 PILYLFLFCISSIFLLMIKKKYT 359 P+ + + L + ++ Sbjct: 358 PLTAATP-GLIYLALGLFALRWA 379 >gi|170743204|ref|YP_001771859.1| permease YjgP/YjgQ family protein [Methylobacterium sp. 4-46] gi|168197478|gb|ACA19425.1| permease YjgP/YjgQ family protein [Methylobacterium sp. 4-46] Length = 362 Score = 83.5 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 46/355 (12%), Positives = 120/355 (33%), Gaps = 18/355 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTVL 61 + YI R L + + + + ++ + + S + +S P V Sbjct: 6 TLGRYIAARFLRMIAGVFLTVFALVYTLDFVELMRRAGEAPGASALTVAHLSLLRTPAVA 65 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF L ++R EL++ G S ++P + +A+ + + + N + Sbjct: 66 EQIMPFAILFGAMGALLQLSRKLELVVARAAGISAWQFLQPGVLVAVGIGALMVGAYNPL 125 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 +++KQ S + + + + L +DL+I+ + ++ ++ + Sbjct: 126 A----ASLKQRSTQVEARIFARSTKGG----LSNDLWIRQRSVDGQAIVRASTAIEGTTS 177 Query: 182 QTHKIYYA--QSGSI--DLDRQAIILNDG--EVHRKSPISKDISIMKFKSYTLQTESANS 235 + G+ ++ + L+DG E+ +++D + +Y + + A S Sbjct: 178 LAGVTIFTFDAQGAFGQQIEARRATLHDGYWELQDARVLTQDSGPESYDTYLVASNLAPS 237 Query: 236 STI-VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + D + L+ YR + L + + + ++ + A+ Sbjct: 238 QVRQRVTPPDSVPFWQLSETIARSERAGLDAARYRLQRAVLLARPM--LFVAMVLVAASV 295 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 R ++ F ++ + P+ F + S+ Sbjct: 296 SLRFFRFGGIGRMALAGVAAGFALYVARQVMEGLGASGIVAAPVAAWFPAVVGSL 350 >gi|15888447|ref|NP_354128.1| hypothetical protein Atu1107 [Agrobacterium tumefaciens str. C58] gi|15156139|gb|AAK86913.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58] Length = 362 Score = 83.5 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 54/359 (15%), Positives = 114/359 (31%), Gaps = 20/359 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTV 60 + Y L+ + + L + I ++ + +S S+ L ++ +P + Sbjct: 4 NTLARYFLKRYLMTTIWFVLGVSSIIYLADFSETARRMSGLPGYSVPAALGLTALRLPLI 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L PF L S+NR EL++ G S I P + A+ + I + N Sbjct: 64 LQQTVPFIALFVGMTTLISLNRRYELVVTRAAGISAWQFILPFVLGAVFIGILSVMVLNP 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEE----NLFFRLDDDLYIKISKYNPNNTL-QGIFI 175 I ++ + A + +E D I + N T+ + + Sbjct: 124 IAAWGQNKSLAMEAGLRNDAGGGRQQEIIPWMRQSSGGKDTIIGAKSFEDNGTMLLDVVL 183 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 +D D ++ L DG + + ++Q + Sbjct: 184 IDVDKDGNIVS--------RKDAKSAKLEDGYWLLNGVSETRAGHVPVRQESMQISTNLR 235 Query: 236 STIVLKANDQNLS---FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 V + Q + F L+ + +++H L+ L V LI+ A Sbjct: 236 REFVQERMTQTETVAFFDLSHKIEVAKSFGLSSKALETQYHFLLSTPLLLVAMTLIA--A 293 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 R + I + F ++ + ++ P + +++ I ++ L Sbjct: 294 TVSLKFSRFAQSRSVILGGIVSGFVLYVV-TVLVRAFGSGGVVPPTVAVWVPVIVALAL 351 >gi|317060239|ref|ZP_07924724.1| conserved hypothetical protein [Fusobacterium sp. D12] gi|313685915|gb|EFS22750.1| conserved hypothetical protein [Fusobacterium sp. D12] Length = 265 Score = 83.5 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 39/255 (15%), Positives = 90/255 (35%), Gaps = 4/255 (1%) Query: 99 LIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLY 158 ++KP+L+L F+ + I P+ ++ LS+K L+E F ++ Sbjct: 6 ILKPILYLGFASMFFILFLQESIIPRSYIKLQYLSSKIAYENPVFQLKERTFMNNLENYS 65 Query: 159 IKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDI 218 + I K + +GI I ++ T + + D +I+L Sbjct: 66 LYIDKVGRDKHAKGILIFENDKKSTFPVVLVGHEAYWRD-SSIVLEKANFISFDEKGVRK 124 Query: 219 SIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQ 278 F+ ++ ++ S + +K + + + E Y+ E H++L Sbjct: 125 LTGSFEDKRVELQAY-FSDLKIKVKETEMMSIATLLQEMKGKTKEEKLIYKVEIHRKLAL 183 Query: 279 WLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 V+ ++ + R KK + L+I F + I+ + Sbjct: 184 PFSSVMLSMLGV--FLSIGHQRSGKKAGILVGILTIFFYISLLNIGIVLANVGKIPILLG 241 Query: 339 LYLFLFCISSIFLLM 353 ++L ++++ + Sbjct: 242 VWLPNLLLAALTYRL 256 >gi|161524005|ref|YP_001579017.1| permease YjgP/YjgQ family protein [Burkholderia multivorans ATCC 17616] gi|189351234|ref|YP_001946862.1| YjgP/YjgQ-like transporter [Burkholderia multivorans ATCC 17616] gi|160341434|gb|ABX14520.1| permease YjgP/YjgQ family protein [Burkholderia multivorans ATCC 17616] gi|189335256|dbj|BAG44326.1| YjgP/YjgQ-like transporter [Burkholderia multivorans ATCC 17616] Length = 382 Score = 83.5 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 49/380 (12%), Positives = 120/380 (31%), Gaps = 27/380 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRLYEKYFARQIYVTFVFILFAFSGLFFFFDLISELNSVGHGNYKFGYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + + L I ++ Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLLKIGVPLVIVTYLIGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF-------FRLDDDLY--IKISKYNPNNTLQ 171 + P +++ +A A S + ++ + + + + P++T+ Sbjct: 121 VGPYADQLSERVRLQALGASVSSNFQSGVWVKDTLAARENGEQVTRFVNVGSLAPDSTIS 180 Query: 172 GIFIVDSRDT-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-------------D 217 + I + Q + AQ+G + +L +PI Sbjct: 181 NVRIYEFDAKFQLKNVRIAQTGRYEP-PGHWLLKGVTETELTPIQPIAGQAPDALNPVYR 239 Query: 218 ISIMKFKSYTLQTE-SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRL 276 + Y L+++ + +++L + ++ L + + + Y ++L Sbjct: 240 SQQVSLPEYRLRSDLTPQILSVLLVSPERMSIINLFRYIQHLRENHQDTQRYDIALWRKL 299 Query: 277 TQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 + ++S+ A R +F + + + H N + Sbjct: 300 LYPFAVFVMLVLSLPFA--YLHTRAGVVGVKVFGGIMLGMSFQLLNTLFSHIGTLNTWPA 357 Query: 337 PILYLFLFCISSIFLLMIKK 356 P+ I L K Sbjct: 358 PLTAATPGLIYLALGLFALK 377 >gi|194426241|ref|ZP_03058796.1| putative permease, YjgP/YjgQ family [Escherichia coli B171] gi|194415549|gb|EDX31816.1| putative permease, YjgP/YjgQ family [Escherichia coli B171] gi|195183222|dbj|BAG66767.1| putative permease [Escherichia coli O111:H-] Length = 285 Score = 83.5 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 110/290 (37%), Gaps = 19/290 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIM--------KFKSYTLQTE 231 YA+S +I+ D+ IL+ G H+K K+ + F S L+ Sbjct: 181 DLSLESYIYARSATIEDDKT-WILH-GVNHKKWLNGKETLEILDNLAWQSTFTSMNLEEL 238 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLF 281 S ++ ++ + +++L + YR ++L +F Sbjct: 239 SMPGNSFSVRQLNHYINYL--------QETGQPSSEYRLALWEKLGHPIF 280 >gi|163854870|ref|YP_001629168.1| hypothetical protein Bpet0565 [Bordetella petrii DSM 12804] gi|163258598|emb|CAP40897.1| conserved hypothetical protein [Bordetella petrii] Length = 392 Score = 83.5 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 53/345 (15%), Positives = 124/345 (35%), Gaps = 23/345 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M++ Y+ R I RS + L ++ + ++ ++ V S+ LL + +PT Sbjct: 1 MRTARRYLAREIYRSCAVVLLALLGLFTFFALVDDLDNV-GDKFSMLALLYMQALALPTR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L + + EL+I+ +G S + L++ + + + L I + Sbjct: 60 LYDLLPIGLLIGAILALAGLAQRNELVILRVSGVSGMRLLRMLWLITLPLMIGASLLSEF 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENL-FFRLDDD---LYIKISKYNPNNTLQGIFIV 176 + P + S + + + ++ F D I I+K + ++G+ + Sbjct: 120 VTPAAEIKSGEASLMFRGKASGTRMDSGYWFKEPTRDGGTRIINIAKLLADGNVEGVTLY 179 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILND------------GEVHRKSPISKDISIMKFK 224 + + + + R ++L + K P + S+ K Sbjct: 180 EF-KPGLQLTTMSTAATGAFTRDKLVLKNVVETHIDDRAAQALADAKPPRTPPASVTKLP 238 Query: 225 SYTLQTESANSS--TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFP 282 L T + VL +L+ LL+ + ++ ++++ Sbjct: 239 QRELDTTLSPERLLARVLTPERMSLNTLLD-YIDYLHHNQLDAGRQVVALWRKVSYPFTL 297 Query: 283 VIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH 327 ++ +I+I A R+ +FI + + G F ++ Sbjct: 298 LV--MITIAAPIGFMQTRRGGVGAKVFIGILLGVGFFMLNQLALN 340 >gi|134302362|ref|YP_001122331.1| YjgP/YjgQ permease [Francisella tularensis subsp. tularensis WY96-3418] gi|134050139|gb|ABO47210.1| putative permease YjgP/YjgQ family [Francisella tularensis subsp. tularensis WY96-3418] Length = 351 Score = 83.5 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 37/204 (18%), Positives = 87/204 (42%), Gaps = 9/204 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI R + SFL+ + + ++ L +++ +++ + +++ + +P + Sbjct: 1 MNRIDRYIFRTVFSSFLIVSIIFCILFFIFTYLAQVSNNTANVSNFELIIN-TLIQLPGI 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P C + L+ + N+E++++ + G S + K V+ + ++ S+ + Sbjct: 60 LYTLLPACAMVGALMGLSLLANNSEIIVLRSFGRSTAQIAKGVILVGLIGSVTTMVFGGY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + + +Y +L+F+ D + N GI +D Sbjct: 120 IAP--------ILQRQVDTNMVTYNTHDLWFKTPDGFMNIANIEPTNGKAYGIRKFMVQD 171 Query: 181 TQTHKIYYAQSGSIDLDRQAIILN 204 + +I YA+S + D A + N Sbjct: 172 NKVREIRYAESATYINDASANVFN 195 >gi|285019431|ref|YP_003377142.1| permease [Xanthomonas albilineans GPE PC73] gi|283474649|emb|CBA17148.1| putative yjgp/yjgq family permease protein [Xanthomonas albilineans] Length = 368 Score = 83.5 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 52/367 (14%), Positives = 120/367 (32%), Gaps = 23/367 (6%) Query: 5 ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 +LY+ R + + L++ ++ + ++ + + + SL + Y +P + Sbjct: 9 DLYVGRAVLGTVLLTWAVLLGLDVIMALSNEFKDIGKGSYSLGHAVAYVAYTVPRRAYTL 68 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P + L + +EL + G SR L +L + + S + P Sbjct: 69 FPTGAVIGVLMGLGQLAATSELTALRALGLSRRRLSLAAAATMTVLIVAMVFSGETLGPW 128 Query: 125 CRSTIKQLSAKAQLALTFSYLE-ENLFFRLDDDLYIKISKYNPNN---------TLQGIF 174 ++ + A A+ S L+ R D ++ + L+ + Sbjct: 129 AQNQADVIKANAKFNSNMSMARYSGLWAREGD--TFLNAQAGEEHLQDGGGSWLELRDVR 186 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + D + S + L G +R + + + F S ++ Sbjct: 187 LYSL-DQNGRLATLTHASSAEHHANGWTLKQG--YRDTFAERSVQRETFDSQPWPSQLDA 243 Query: 235 SSTIVLKANDQNLSFL-LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 ++ A +NLS L+ + Y ++ R W +P+ + A Sbjct: 244 AALASGLAKPRNLSAHDLHVSIEYRQRNGLDARDYEDQYWSR---WFYPINVLALCFAAI 300 Query: 294 D-KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIF 350 +R +F+ + + VFW ++ + + L + ++ Sbjct: 301 PFAFGALRSGGMGKRLFLGILFAL-VFWLLQLFFGRMAGALKFDYRIAYALPPLVMLTVS 359 Query: 351 LLMIKKK 357 LM +K+ Sbjct: 360 WLMFRKR 366 >gi|224373192|ref|YP_002607564.1| putative permease YjgP/YjgQ [Nautilia profundicola AmH] gi|223589644|gb|ACM93380.1| putative permease YjgP/YjgQ [Nautilia profundicola AmH] Length = 323 Score = 83.5 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 45/247 (18%), Positives = 99/247 (40%), Gaps = 11/247 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y++ F+M L + + +I I+ N+ ++ + L K+ +P V Sbjct: 1 MDRLSKYLISGFWPIFIMIFLILFLVTSIIIIISIANITANIHITFGELFKMYMLSLPKV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + F + ++ + EL+ + ++G TL+KP LFL++LL+I + I Sbjct: 61 LFITLSISFFISAVSLFAKHSETQELIALFSSGVKPYTLLKPFLFLSLLLTIVNLLILFI 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + K + Q A F++ + + + + I S T + I + + Sbjct: 121 SIPYAKVAFKNFKNQKQQAAKFNF-QTSQISQRFGNWNIFTSSK-KGKTYENIILY---N 175 Query: 181 TQTHKIYYAQSGSIDLDRQAI--ILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + +++ A+ + + L G V+ + I+ F + + SS Sbjct: 176 NKENQLILAKYAELKNKNGYLNFELKKGNVYAFDKST----IINFGKMQINQKIPKSSYS 231 Query: 239 VLKANDQ 245 + + ++ Sbjct: 232 IFRFSEY 238 >gi|218296306|ref|ZP_03497062.1| permease YjgP/YjgQ family protein [Thermus aquaticus Y51MC23] gi|218243378|gb|EED09908.1| permease YjgP/YjgQ family protein [Thermus aquaticus Y51MC23] Length = 336 Score = 83.5 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 109/336 (32%), Gaps = 29/336 (8%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 Y+L+ + + + + + + + S +L + Y +P L + Sbjct: 2 LGRYVLKEVLLPYGVGVFLFMALLTFDLLSSLSGVFLSRGAGAEAILLLVLYRLPWTLSL 61 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P L+ + R++EL G + L+KP+L L++L+++ + + P Sbjct: 62 ALPLGLVFAILVGLSRLIRHSELKAAYAAGVPPLALLKPLLLLSLLVALVNLYNLAEVRP 121 Query: 124 KCRSTIKQLSAKAQL--ALTFSYLEENLFFRLDDDLYIKISKYNPN---NTLQGIFIVDS 178 + + A+ L ++ +Y + P N L G+ +VD Sbjct: 122 RALEAYDRALARLLYGEGGPSGVLRRQVYALEGQGVY-YAEEVVPEVGQNRLYGLRVVD- 179 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + +IY A+ G D + + G V + + I+ F + S Sbjct: 180 ---EKGRIYSAKEGVWDREGWQFL---GYVLEEGKLKPFQGILPFPA----LFRPKESLG 229 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 D + L R + R H+RL L + AA Sbjct: 230 SKDPYDSSTLEELWQ-------RARVEPAARFALHRRLADALGGF---FLGFAAAALGLS 279 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY 334 +R+ + + FG + ++ + Sbjct: 280 LREAA--WAFLGVVLLIFGYYVLWTLSAQLARYDVS 313 >gi|283833699|ref|ZP_06353440.1| putative permease [Citrobacter youngae ATCC 29220] gi|291071385|gb|EFE09494.1| putative permease [Citrobacter youngae ATCC 29220] Length = 360 Score = 83.5 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 52/366 (14%), Positives = 126/366 (34%), Gaps = 21/366 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNIFSRYLIRYVFIGFAAAAGILLPLFTTFNLINELDDVSPGGYRWPQAVIVVLMTLPRN 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++ EL I +TG S + L +++ L +++ Sbjct: 61 LIDLSPFIALLGGIAGLGHLSKTMELTAIRSTGLSIFKIAMITLTAGVMIIALLAVTDEW 120 Query: 121 I-EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 I P + ++ + + + N+ + D + I + N GI I R Sbjct: 121 IAAPLQQHALRIRTTAMAQDPNADHQKNNMLWARRGDAFATIKSLDAKNQPVGIEIFHYR 180 Query: 180 -DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK-------FKSYTLQTE 231 D YA+ G + + L R + + K F L+ Sbjct: 181 PDLSLETYIYAEKGRVLKNGT-WTLEGVYEKRWLDGRETTEVHKQQQWKSIFTRINLEML 239 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 + + + +K +S+L + +R ++L + L + L++I Sbjct: 240 TMPAGSFSIKQLRSYISYL--------QDTGQPSIEFRVALWQKLGRPLLTLAMMLLAIP 291 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH-KIEQNPYYIPILYLFLFCISSIF 350 ++ R + + + + + I++ I + + + I Sbjct: 292 F--TFSIPRSPGIGSRLAMGVIVGLLTYISDQIIVNIGILFDLQVQLTVLCPPVALLIIA 349 Query: 351 LLMIKK 356 L+++ + Sbjct: 350 LILVSR 355 >gi|154246776|ref|YP_001417734.1| permease YjgP/YjgQ family protein [Xanthobacter autotrophicus Py2] gi|154160861|gb|ABS68077.1| permease YjgP/YjgQ family protein [Xanthobacter autotrophicus Py2] Length = 364 Score = 83.5 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 115/357 (32%), Gaps = 22/357 (6%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTE-SLNILLKISGYLIPTV 60 + Y R + ++ L V + ++ L+ + + ++ +L ++ Y P+ Sbjct: 4 RILGFYFARRFASAVVLIFLSCVTLIVLVDFLEMARRTADREQVTVGLLALVTLYRAPSF 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + PF + ++R EL++ G S I P + +A L+ +F N Sbjct: 64 TEQLMPFAVLFGAISTFVLLSRRLELVVARAVGLSVWQFITPPVLVAFLIGVFSTTVFNP 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEEN--LF----FRLDDDLYIKISKYNPNNT-LQGI 173 + + Q+ + + + L + F +D I+ L G+ Sbjct: 124 VSADFKERANQIEGEIFGSSSSGLLPQGKKEFWVRQQSVDGQSIIQAQATRQGGRALSGV 183 Query: 174 FIVDSRDTQTHK-IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL--QT 230 + + A+S ++ A IL D V + + + +Y + Sbjct: 184 VVFEFDKADRLVERVEARSATL--GDGAWILTDARV-----LVPGLDHQHYDTYLIATNL 236 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 + ++ + L + E YR + L + V LI+ Sbjct: 237 DPKQIQESLIAPETVSFWQLPA-AIRSAEQSGFGAERYRLQLQSLLARPFLLVAMVLIAA 295 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCIS 347 V + R I + F ++ G + + + P+ + ++ Sbjct: 296 VVGL--RVFRFGGVGQTILGGVLAGFLLYVGTK-LAEDLGDAGFVHPVAAAWFPAVA 349 >gi|224438206|ref|ZP_03659141.1| hypothetical protein HcinC1_09510 [Helicobacter cinaedi CCUG 18818] Length = 339 Score = 83.5 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 57/355 (16%), Positives = 128/355 (36%), Gaps = 17/355 (4%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + Y+ + F L + FIA V+ ++ S L + YLIP+ L Sbjct: 2 LKKYLFSSFAQIFFPFFLVLFFIASVVLLIDIAGRTYVVKMSFLDLGTLFMYLIPSSLFF 61 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 + P F ++ + + EL++ + G+ + +++ L + +L ++ LF+ I+ P Sbjct: 62 IIPITFFAALVLGISRLAYDYELMVCFSLGSKPLDMVRFFLPITLLATLVLFVFSFILLP 121 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 S K A+ + + + ++ F + D + + + N Q + + + Sbjct: 122 LTTSASKNFVAQKKADIDVN-IKPGEFGQKLGDWLVYVDSVD-NRKYQNLVLFSENGFEG 179 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 AQSG + ++ LN ++I + + + +++ + Sbjct: 180 DTFIVAQSGQTNNNQGLFELNLTSGKAYFAAPEEIKRVDYNTMSVRQNVSEPQLSGYDLI 239 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 + E + R +L Q + +F L+SI + R Sbjct: 240 AYWK----------EAFSLESRQKLR-----KLAQAVMVSLFPLVSIFLIPLFGIANPRF 284 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + + + + S +++ YI I I L+ F ++ I + Y Sbjct: 285 RSNMSYFYVIGSVALYFVLMYIASDNFALVGMISIPILWFFGGFFLYKKFIARFY 339 >gi|258542096|ref|YP_003187529.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-01] gi|256633174|dbj|BAH99149.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-01] gi|256636231|dbj|BAI02200.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-03] gi|256639286|dbj|BAI05248.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-07] gi|256642340|dbj|BAI08295.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-22] gi|256645395|dbj|BAI11343.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-26] gi|256648450|dbj|BAI14391.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-32] gi|256651503|dbj|BAI17437.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654494|dbj|BAI20421.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-12] Length = 370 Score = 83.5 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 47/365 (12%), Positives = 111/365 (30%), Gaps = 27/365 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTVL 61 + YI R S + + I + + + V++ S N++ +I+ +P Sbjct: 6 TLSRYIARQFVFSVVAMIASLTGIVCLFDFIDLLRRVATKPDVSTNVVTEIAALHVPYFA 65 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF + + R++EL++ G S + + A+L+ + + Sbjct: 66 TEILPFGMLLGGIVCFWRLTRSSELIVARAAGISAWQFLTAPVACAMLIGAVFTTLISPV 125 Query: 122 EPKCRSTIKQLSAKAQLALTFSYL---------EENLFFRLDDDLYIKISKYN-PNNTLQ 171 ++L + + + + + + L+ Sbjct: 126 SSSMYRRAEELDQQYLRTGGGPLSLSSGSLWLRQSDSQYDPHGVAMLHARGVQLKDGLLR 185 Query: 172 ----GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 +F +D +D + A G + IL+D V R + + + + Sbjct: 186 IRNVSVFRLDHQD-KLMMRIEAPEGYL--GTLKWILSDASVVRPNDLLHHVGQI---DLP 239 Query: 228 LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLE-TYRSEFHKRLTQWLFPVIFG 286 ++ L P + R +R F L + Sbjct: 240 TDLTVNRVQESFSSPETLSVWAL--PGFISLLDRSGFSSIRHRIHFQSLLALPMLAGTMA 297 Query: 287 LISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCI 346 L++ A R+ I ++ F +F S + + + P+L + + Sbjct: 298 LVA--AGFSMRPSRRGGVARMIGSGVAAGFLLFTV-SKVAEQFGNSGALPPMLAAWAPTL 354 Query: 347 SSIFL 351 + + L Sbjct: 355 AGLCL 359 >gi|282892297|ref|ZP_06300693.1| hypothetical protein pah_c221o031 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281497888|gb|EFB40239.1| hypothetical protein pah_c221o031 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 359 Score = 83.5 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 52/361 (14%), Positives = 125/361 (34%), Gaps = 33/361 (9%) Query: 21 LFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSM 80 + V I + I ++ + + ++ IP +LP+V P + + ++ + Sbjct: 1 MAFVAILLTTR-FDEIAHFAALGAAGSHIIWFIVSQIPYILPIVIPISSLIASLLLIQRL 59 Query: 81 NRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLAL 140 ++ EL + +G + ++ P+L A +++ F + + L + + Sbjct: 60 SQTHELTALRASGWAIRDILYPILIAAAFIALLNFYIVSELATNSHLQASLLKKELRSIN 119 Query: 141 TFSYLEENLFFRLDDDLYIKISKYNPNNTLQG--IFIVDSRDTQTHKIYYAQS------- 191 L R+ Y + +F + S+ ++ A+S Sbjct: 120 PLLLLNNKHLMRV-KGAYFHAMGNSRVGEFAKNALFAMPSKQNNRIQLMIAKSLHADSVL 178 Query: 192 --GSIDLDRQAIILNDGE---------VHRKSPISKDISIMKFKSYTLQTESAN--SSTI 238 G+ + + + +GE + + +D S++ F+ + + S + Sbjct: 179 FIGNSVTNMTTLPVENGESFDHFVVENLEKTMTPIQDFSLI-FQRNVFSLSNDHLKLSLL 237 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYR--SEFHKRLTQWLFPVIFGLISIVAADKR 296 + + +Q L L PN + + R +E +R + + F L+ Sbjct: 238 IYRMKEQALH-LRQPNLLREEMKQLQKQQNRSYAEIIRRFSLAIAVFSFTLMGCAFGM-- 294 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL-FCISSIFLLMIK 355 + R R +F+ F + + IE + + +LYL I I ++ Sbjct: 295 NISRHRSNKGVVFVIALAVF--YLISYFTAKGIEHHLFSATLLYLIPHLLILGISSFILY 352 Query: 356 K 356 + Sbjct: 353 R 353 >gi|283778149|ref|YP_003368904.1| permease [Pirellula staleyi DSM 6068] gi|283436602|gb|ADB15044.1| permease YjgP/YjgQ family protein [Pirellula staleyi DSM 6068] Length = 395 Score = 83.5 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 53/402 (13%), Positives = 121/402 (30%), Gaps = 57/402 (14%) Query: 1 MKSFELYILRCIGRSFLMSCLFIV---FIAWVIQILQRINLVSSSTESLNILLKISGYLI 57 M ++ I + F ++ + + + +V Q + +L++ Y++ Sbjct: 1 MPVIVRQVVWDILQWFTIAIVSLTVFMMLVFVGQQARLY------GLGALAILRLIPYIL 54 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 P L P V M+ + E++ I + G S + ++ P L LA LLS+ Sbjct: 55 PNALAFAVPGSILFTVCVVYGRMSSDNEVVAIKSMGISPMVVVWPSLALAFLLSLVAVWL 114 Query: 118 ENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKI--SKYNPNNTLQGIFI 175 ++ + ++++ ++ + + L R +I ++ I Sbjct: 115 NDVAFSWGVTGMRRVVLQSVEEICYGMLRT---QRSYSGPTFQIIVKDVEGRKLIRPIMT 171 Query: 176 VDSRDTQTHKIYYAQSGSIDLD-----------------------------RQAIILNDG 206 + A + + + I L D Sbjct: 172 FSENNDMPAFTLRATEAELRSNLQRNTLVVVLTDCEIDFSNGARVSSPGIVEREIKLEDA 231 Query: 207 EVHRKSPISKD-------ISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPN 259 R S S ++ + + + + F L+P+ P Sbjct: 232 THKRVGGDSPTNLPLRQISSEVELQEIEITKLEQSLAAETGMNLMTGNFFELSPDAWQPK 291 Query: 260 YR-----PELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSI 314 + L R+E +R + + F +I A F L I Sbjct: 292 KKKLETARTRLYRLRTEPWRRWSNGFACLAFVMIGTPLAITLRNSDWMSTFGRCF--LPI 349 Query: 315 SFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 G + ++ + K + +++ +++ +IKK Sbjct: 350 LIGYYPFLAFALEKAKSGDLPPYSIWIANIACAAVGYWLIKK 391 >gi|254453977|ref|ZP_05067414.1| permease, YjgP/YjgQ family [Octadecabacter antarcticus 238] gi|198268383|gb|EDY92653.1| permease, YjgP/YjgQ family [Octadecabacter antarcticus 238] Length = 362 Score = 83.5 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 49/337 (14%), Positives = 112/337 (33%), Gaps = 16/337 (4%) Query: 5 ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 Y R +F + + +I +++++ SL + ++S +PT + + Sbjct: 2 HRYFARRFAWTFAATFGGFFVLMLLIDLVEQLRRYGGD-ASLGDMFQLSLLNLPTGIYAI 60 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P + T + R++EL++ G S + + L + +++ N + Sbjct: 61 LPLIMVLATVTTFLGLARSSELIVTRAAGRSALNALIAPLIVTLIIGAIAIGVLNPLVAA 120 Query: 125 CRSTIKQLSAKAQLALTF--SYLEENLFFRLDDD---LYIKISKYNPNNT-LQGI-FIVD 177 + + + E L+ R DD I+ + N + T LQ + FI Sbjct: 121 TLKEYEARENALRSDGPSVLAISENGLWLRQGDDNSQTVIRAGRANLDGTQLQDVTFITF 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A S ++ + +++ ++ TL+ S ++ Sbjct: 181 PPTGGPTRRIEAASANLTQGAWELSEAKAWPLNSGRVAESVAT---THTTLRIPSTLTAD 237 Query: 238 IVLKANDQNLSFLLNPNP---NNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + + S + P + ++ F L Q F + LI A Sbjct: 238 QIRDSFGVPSSIPIWELPAFIDRLEVAGFSAARHQVWFQMELAQPAFLLAMVLIG--AGF 295 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ 331 R + + ++ I F +F+ ++ E Sbjct: 296 TMRHQRGGRTGVMVLTAILICFALFFLRNFAQILGEN 332 >gi|323525103|ref|YP_004227256.1| permease YjgP/YjgQ family protein [Burkholderia sp. CCGE1001] gi|323382105|gb|ADX54196.1| permease YjgP/YjgQ family protein [Burkholderia sp. CCGE1001] Length = 382 Score = 83.5 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 50/382 (13%), Positives = 128/382 (33%), Gaps = 26/382 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R + +F+ + + ++ +N V + P+ Sbjct: 1 MRIYERYFARQVYLTFIFILFAFSGLFFFFDLINELNSVGHGNYKFQYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + I L ++ + Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEYTIFRVSGLATNQALRSLLKIGIPLVFLTYLIGEV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRL-----DDD----LYIKISKYNPNNTLQ 171 I P +++ +A + S + ++ + D ++ + + P+ T+ Sbjct: 121 IGPYTDQLSERVRLEALGSSVSSNFQSGVWVKDTLTARADGEQVTRFVNVGELRPDATIS 180 Query: 172 GIFIVD-SRDTQTHKIYYAQSGSID-LDRQAII-LNDGEVHRKSPISKDI---------- 218 + I + + + A+SG + + D ++ P S Sbjct: 181 NVRIYEFDSKFRLSNVRIAKSGVYQPPGHWQLTGVTDTQLIDVPPPSGTPADALNPVYRA 240 Query: 219 SIMKFKSYTLQTE-SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLT 277 + Y+L++E + +++L + D+ F L + + + Y ++L Sbjct: 241 KQVVLPEYSLRSELTPQILSVLLVSPDRMSMFNLFRYIQHLTENHQDTQRYEIALWRKLL 300 Query: 278 QWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP 337 + ++S+ A R +F + + + H N + P Sbjct: 301 YPFAVFVMLVLSLPFA--YLHTRAGVVGMKVFGGIMLGMSFQLFNTLFSHIGTLNTWPAP 358 Query: 338 ILYLFLFCISSIFLLMIKKKYT 359 + + + L ++ K+ Sbjct: 359 LTAATP-GLVYLVLGLVGLKWV 379 >gi|144900091|emb|CAM76955.1| permease YjgP/YjgQ family [Magnetospirillum gryphiswaldense MSR-1] Length = 367 Score = 83.5 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 55/369 (14%), Positives = 117/369 (31%), Gaps = 29/369 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSST-ESLNILLKISGYLIPTVL 61 + YI R +F I+ + ++ I++ I + + L+ ++ +P ++ Sbjct: 6 TLSAYIGRQFLLAFASVLAVILGVVFLFDIIELIRRAAGRGDLGVFNLVAMALLKLPQMM 65 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 V PF + + R EL++ + G S + PVL L L + + N + Sbjct: 66 HTVLPFAVMIGAMVAFWRLTRTHELVVARSAGISAWQFLTPVLVLVAGLGVIELTAFNPM 125 Query: 122 EPKCRSTIKQLSAKAQLALTFSY--------LEENLFFRLDDDLYIKISKYNPN---NTL 170 +++ + L T + L E + + + L Sbjct: 126 AATMYGRFQKMEDEILLGKTSALDVSEMGLWLREG---DAQRQIVLHADQVQQELLTLNL 182 Query: 171 QGIFIVD-SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ 229 +G+ + + + + A SG + + L D + S + + L Sbjct: 183 RGVHVFVLNAEEHFTRRLSAASGRLADG--VLELTDVW-----EMEGGKSSVHHPALKLA 235 Query: 230 TESANSSTIVLKANDQNLSFLLNPNPNNPNYRPEL-LETYRSEFHKRLTQWLFPVIFGLI 288 TE A+ + +SF P + +R F L+ L L+ Sbjct: 236 TELTLERVHDNFASPETMSFWQLPAFITFFEKAGFAATKHRMHFQSLLSSPLLYCAMVLV 295 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVF-----WGFSYIIHKIEQNPYYIPILYLFL 343 + V + + + + + F + F + + P L L Sbjct: 296 AAVFSLRPNMRAGGLLMRVGGGVAAGFGIYFFNKIIYAFGLSATLPQGLAAWSPALVAGL 355 Query: 344 FCISSIFLL 352 +S + L Sbjct: 356 IGVSGLLHL 364 >gi|83313005|ref|YP_423269.1| permease [Magnetospirillum magneticum AMB-1] gi|82947846|dbj|BAE52710.1| Predicted permease [Magnetospirillum magneticum AMB-1] Length = 367 Score = 83.5 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 54/367 (14%), Positives = 120/367 (32%), Gaps = 33/367 (8%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTVLPMVT 65 YI R +F L I+ I + +++ I + + +L ++ + +P +L + Sbjct: 10 YIGRQFASAFATVLLVILGIILLFDVIELIRRAAGRPELGITPILLMAFFKLPQMLHTIL 69 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 PF + + + R EL++ G S I PVL +A + IF + N + Sbjct: 70 PFAVMIGSMVCFWRLTRTHELVVARAAGISVWQFITPVLAVAGIFGIFEITTFNPMAAAM 129 Query: 126 RSTIKQLSAKAQLALTFSY-LEE-NLFF---RLDDDLYIKISKYNPNNTLQGI-----FI 175 ++L + ++ + E L+ + ++ + + + I F+ Sbjct: 130 YGRYERLQDELLATKASAFDISEVGLWLREPHENGEMVVHSETVRQDGLVLHIRDAHFFL 189 Query: 176 VDSRDTQTHKIYYAQSGSIDLD----RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 D D H+ A+S ++ R+A ++ G+ + + Sbjct: 190 YDRPD-HFHQRISAESATLVDGAFEVRRAWVMEGGKPSVFKEQMHIPTQLTLDRIHDNFA 248 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S + + +R L + L++ V Sbjct: 249 SPETLSFWQLPGFIRFFE----------RAGFTANKHRLYLQSLLASPVLYCGMVLMAAV 298 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVF------WGFSYIIHKIEQNPYYIPILYLFLFC 345 + + R + I ++ F V+ + + + P L+ L Sbjct: 299 FSLRP-NTRSGGLLARIGAGVAAGFAVYFFSKVIYALGLSATLPQTLAAWTPPLFAGLIG 357 Query: 346 ISSIFLL 352 +S +F L Sbjct: 358 LSGLFHL 364 >gi|84622419|ref|YP_449791.1| hypothetical protein XOO_0762 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188578606|ref|YP_001915535.1| putative permease, YjgP/YjgQ family [Xanthomonas oryzae pv. oryzae PXO99A] gi|84366359|dbj|BAE67517.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188523058|gb|ACD61003.1| putative permease, YjgP/YjgQ family [Xanthomonas oryzae pv. oryzae PXO99A] Length = 368 Score = 83.1 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 51/366 (13%), Positives = 113/366 (30%), Gaps = 21/366 (5%) Query: 5 ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 + Y+ R + + L++ ++ + V + + + + Y +P + Sbjct: 9 DWYVGRVVLSTVLLTWAVLLGLDLVNAFASEAKDIGQGSYTFGHAVAYVAYTVPRRAYTL 68 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P + L + +EL + G SR + V+ LL+ + IS I P Sbjct: 69 FPTAAVIGALMGLGQLAATSELTALRALGVSRKRMSASVVAAMALLTASMVISGETIGPW 128 Query: 125 CRSTIKQLSAKAQ--LALTFSY-----LEEN-LFFRLDDDLYIKISKYNPNNTLQGIFIV 176 ++ L A A+ + S E F + + L + + Sbjct: 129 AQNQADTLKASARYNSDMAASLYAGLWAREGDTFLNALSGEEKLLDGGDTALDLHDVRLY 188 Query: 177 --DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 DS Y A R + +V R + + + F Q++ Sbjct: 189 HLDSSGRMQQLTY-ASVAEHRDGRWTLR----QVRRDTFQERSVQRETFPELPWQSQLNP 243 Query: 235 SSTIVLKANDQNLSFL-LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 ++ A +NLS L + + Y ++ R W +P+ + + A Sbjct: 244 AALAAGLAKPRNLSAHDLEQSIEYRSRNGLDARDYEDQYWSR---WFYPLNVLALCMAAI 300 Query: 294 D-KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-NPYYIPILYLFLFCISSIFL 351 +R +F+ + + G + + Y L + + Sbjct: 301 PFSFGSLRSGGLGKRLFLGILFALGFWLLQLFFGRMAGALKLDYRIAYALPPMVMLGVSA 360 Query: 352 LMIKKK 357 + +++ Sbjct: 361 WLFRRR 366 >gi|71901306|ref|ZP_00683403.1| permease YjgP/YjgQ [Xylella fastidiosa Ann-1] gi|71728926|gb|EAO31060.1| permease YjgP/YjgQ [Xylella fastidiosa Ann-1] Length = 385 Score = 83.1 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 50/377 (13%), Positives = 127/377 (33%), Gaps = 29/377 (7%) Query: 1 MKSF----ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYL 56 MK F + Y+ R + + L++ L ++ + V + + + S + Y Sbjct: 18 MKLFPCLHDRYVARAVVATVLLTWLVLLGLDVVNGFASEVRDIGKGSYSFGHAIAYIAYT 77 Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 +P + P + L + +EL + G SR V+ + + + + + Sbjct: 78 VPRRAYTLFPTAAVIGMLLGLGQLAATSELTALRALGVSRTRSSLSVMMMIGMGTGLMVL 137 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS-----KYNPNNTLQ 171 + + P ++ L A A+ + + F+ + ++++ + + + Sbjct: 138 TGETLGPWAQAQADILKASAKYKSDMTGARYSGFWAREGEVFLNARSGEEKRLDSGGIM- 196 Query: 172 GIFIVDSR----DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 + + D R ++ ++ + IL +V R + + + F S Sbjct: 197 -LILHDVRLYQLAADGRLQSMTRAARVEHHQDVWILQ--QVQRDTFSERGVQRETFHSLP 253 Query: 228 LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPEL---LETYRSEFHKRLTQWLFPVI 284 ++ ++ A +NLS + + YR + ++ R W +P+ Sbjct: 254 WRSRLDPAALAAGLAKPRNLSA--HELVQSIEYRRRNHLDARDFEGQYWSR---WFYPIN 308 Query: 285 FGLISIVAAD-KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ--NPYYIPILYL 341 + + A L+R F+ + + FW +I Y L Sbjct: 309 VLALCLAAIPFSFGLLRSGGMGKRTFLGILFALS-FWMLQMFFERIASVLKLNYQIFYLL 367 Query: 342 FLFCISSIFLLMIKKKY 358 + + ++++ Sbjct: 368 PPMVMLCGSYWLFRRQH 384 >gi|75675870|ref|YP_318291.1| permease YjgP/YjgQ [Nitrobacter winogradskyi Nb-255] gi|74420740|gb|ABA04939.1| permease YjgP/YjgQ [Nitrobacter winogradskyi Nb-255] Length = 365 Score = 83.1 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 56/366 (15%), Positives = 125/366 (34%), Gaps = 26/366 (7%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS----STESLNILLKISGYLI 57 + Y + + I ++ ++ I +V ++ S ++ + S + + Sbjct: 6 NTLGRYFAGRFM---VAALGVFASIFLLLVLVDYIEMVRRTSGLASASALMVAETSLFRV 62 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 P +L +TPFC + +++R EL++ G S I P L AI L +F Sbjct: 63 PQLLEKLTPFCVLIGAMTCYLALSRKLELVVARAAGVSAWQFISPTLACAIALGVFATTV 122 Query: 118 ENIIEPKCRSTIKQLSAKAQLALTFSYLEE--NLFFR--LDDDLYIKISKYNPNN--TLQ 171 N + R K++ A+ + L + + DD I + + L Sbjct: 123 YNPLSSNLRELSKRMEAEMFGGASGGGLHDASGFWINQVTDDGQAIINAALSEQQGVRLT 182 Query: 172 GIFIV-DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT 230 G+ + D++ + A+ +++ R L G R + + + F Sbjct: 183 GLTVFRFDPDSRFRERIEAREAALEDGRW---LFKGVR-RFTLDNPPVEQETFV-LPTSL 237 Query: 231 ESANSSTIVLKANDQNLSFLLNPN-PNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 A + L P+ + YR ++HK + Q ++ ++ Sbjct: 238 TPAQVQNSFSTPETVSFWQL--PDYIRSSESSGFATAGYRLQYHKLIAQPF--LLAAMVM 293 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF-LFCISS 348 + A+ R + + F ++ S + + + PI + C+ Sbjct: 294 LAASVSLRFFRFGGVQKMVLSGVGSGFLLYV-LSKVTEDLSKAELMNPIAAAWLPVCVGG 352 Query: 349 IFLLMI 354 + ++ Sbjct: 353 LTGFLV 358 >gi|221199306|ref|ZP_03572350.1| putative membrane protein [Burkholderia multivorans CGD2M] gi|221205792|ref|ZP_03578807.1| putative membrane protein [Burkholderia multivorans CGD2] gi|221174630|gb|EEE07062.1| putative membrane protein [Burkholderia multivorans CGD2] gi|221180591|gb|EEE12994.1| putative membrane protein [Burkholderia multivorans CGD2M] Length = 382 Score = 83.1 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 49/381 (12%), Positives = 115/381 (30%), Gaps = 29/381 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRLYEKYFARQIYVTFVFILFAFSGLFFFFDLISELNSVGHGNYKFGYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + + L I ++ Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLLKIGVPLVIVTYLIGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF-------FRLDDDLY--IKISKYNPNNTLQ 171 + P +++ +A A S + ++ + + + + P++T+ Sbjct: 121 VGPYADQLSERVRLQALGASVSSNFQSGVWVKDTLAARENGEQVTRFVNVGSLAPDSTIS 180 Query: 172 GIFIVDSRDT-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-------------D 217 + I + Q + AQ+G + +L +PI Sbjct: 181 NVRIYEFDAKFQLKNVRIAQTGRYEP-PGHWLLKGVTETELTPIRPIAGQAPDALNPVYR 239 Query: 218 ISIMKFKSYTL--QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKR 275 + Y L S +++ ++ L + + + Y ++ Sbjct: 240 SQQVSLPEYRLRSDLTPQILSVLLVSPERMSIINLFR-YIQHLRENHQDTQRYDIALWRK 298 Query: 276 LTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY 335 L + ++S+ A R +F + + + H N + Sbjct: 299 LLYPFAVFVMLVLSLPFA--YLHTRAGVVGVKVFGGIMLGMSFQLLNTLFSHIGTLNTWP 356 Query: 336 IPILYLFLFCISSIFLLMIKK 356 P+ I L K Sbjct: 357 APLTAATPGLIYLALGLFALK 377 >gi|293603258|ref|ZP_06685689.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] gi|292818347|gb|EFF77397.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] Length = 372 Score = 83.1 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 49/325 (15%), Positives = 112/325 (34%), Gaps = 26/325 (8%) Query: 24 VFIAWVIQILQRINLV--SSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMN 81 + + + ++ + S+ LL + IPT L + P + L + Sbjct: 1 MALLGLFTFFALVDDLDNVGDKFSMMALLYMQALAIPTRLYDLLPIGLLIGAILALAGLA 60 Query: 82 RNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALT 141 + EL+I+ +G S + L++ + + I L I + + P + + + Sbjct: 61 QRNELVILRVSGVSGMRLLRMLWVVTIPLMIGAALLSEYVTPWAEIKSGEANLMFRGKAG 120 Query: 142 FSYLEENL-FFRLDDD---LYIKISKYNPNNTLQGIFIVD-SRDTQTHKIYYAQSGSIDL 196 L+ F + I I++ + + GI + + +D + A +G Sbjct: 121 GDRLKSGYWFKEPTANGGMRIINIAELKGDGQVAGITLYEFKKDQTLTVLSTAPTGLFSH 180 Query: 197 DRQAIILNDGEVHR------------KSPISKDISIMKFKSYTLQTESANSS--TIVLKA 242 ++L D R + P + S++K T+ T + VL Sbjct: 181 GD--LVLKDVSETRLDNDAADALANARQPKNPPASVVKVPERTIDTTLSAERLLARVLTP 238 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 ++ LL+ + + + + ++L ++ +I+I A R+ Sbjct: 239 ERMSIVTLLDYVEYLRDNQLQYGRQVVA-LWRKLAYPFTLLV--MITIAAPIGLMQTRRG 295 Query: 303 KKIHPIFISLSISFGVFWGFSYIIH 327 +FI + + G F ++ Sbjct: 296 GVGAKVFIGILLGVGFFMLNQLALN 320 >gi|220935306|ref|YP_002514205.1| permease YjgP/YjgQ [Thioalkalivibrio sp. HL-EbGR7] gi|219996616|gb|ACL73218.1| permease YjgP/YjgQ [Thioalkalivibrio sp. HL-EbGR7] Length = 353 Score = 83.1 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 48/353 (13%), Positives = 121/353 (34%), Gaps = 11/353 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI R + L++ L + + + + ++ + + L + + +P Sbjct: 1 MKRLDAYIARNVMGGTLLAMLVLGGLDTLFAFIAELDEIGRNDYGLIQAVVYTALTVPRR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + + L ++ N+EL + G +++ VL +++ + + + Sbjct: 61 VYELFPTSVLLGSLLSLGALAANSELTAMRAAGVPIAGIVRSVLRAGLMMLVVVVLLGEA 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + ++A + L+ + D +I++ P+ L + I + D Sbjct: 121 VAPMSEQRAQTIKSQASGEEMYRG-SAGLWAK-DGQRFIQVGVVMPDLRLLDLSIYEL-D 177 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + ++GS A IL D E + + + S + + Sbjct: 178 AERRLSSMLRAGSASYQNGAWILRDIERSHLGEAGVTGEHVDEERWPRLLAPELFSVLAV 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + + L ++ F R T L ++ L+++ +R Sbjct: 238 EPRQMAATTL-AQYVTYLRENDLDSASFELAFWMRFTTPLSSLVMLLLAVPFVFG--SLR 294 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 +FI L I G +++++ + + L L + Sbjct: 295 TGGAGQRLFIGLLIGVG-----FHLLNRTLNHMGLVYGLPPMLSATLPTLIFF 342 >gi|33603373|ref|NP_890933.1| hypothetical protein BB4399 [Bordetella bronchiseptica RB50] gi|33577497|emb|CAE34762.1| putative membrane protein [Bordetella bronchiseptica RB50] Length = 422 Score = 83.1 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 55/354 (15%), Positives = 119/354 (33%), Gaps = 41/354 (11%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M++ Y+ R I RS + L ++ + ++ ++ V S+ L + +PT Sbjct: 31 MRTARRYLAREIYRSCAVVLLALLGLFTFFALVDDLDNV-GDKFSMLALFYMQALALPTR 89 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L + + EL+I+ +G S + L+ + + I L I + Sbjct: 90 LYDLLPIGLLIGAILALAGLAQRNELVILRVSGVSGMRLLGMLWVITIPLMIGATLLSEF 149 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLD----DDLYIKISKYNPNNTLQGIFIV 176 + P + + L +F+ I I + ++ + + Sbjct: 150 VTPAAEIKSGEADLTFRGKAGGGRLNSGYWFKEPTPQNGTRIINIKTLLADGQVKDVTLY 209 Query: 177 DSR-DTQTHKIYYAQSGSIDLDRQAIILNDGEVHR------------KSPISKDISIMKF 223 + R D + ++ A +G ++L D R K P + K Sbjct: 210 EFRSDLEMTALWTAPNGRFSRGD--LVLTDVSETRIDEHAPSALADAKQPKEPPARVTKV 267 Query: 224 KSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYR----------SEFH 273 L T + ++ L+ +L P + + +E R Sbjct: 268 PELKLDTTLSP---------ERLLARVLTPERMSALTLVDYIEYLRHNQLQYDRQVVALW 318 Query: 274 KRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH 327 ++L ++ +I+I A R+ +FI + + G F ++ Sbjct: 319 RKLVYPFTLLV--MITIAAPIGFMQTRRGGVGAKVFIGILLGVGFFMLNQLALN 370 >gi|113868947|ref|YP_727436.1| permease [Ralstonia eutropha H16] gi|113527723|emb|CAJ94068.1| predicted permease [Ralstonia eutropha H16] Length = 388 Score = 83.1 bits (204), Expect = 7e-14, Method: Composition-based stats. Identities = 59/378 (15%), Positives = 132/378 (34%), Gaps = 40/378 (10%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 ++ +E Y R + F ++ + +L + V++ SL L + PT Sbjct: 4 LRVYERYFGRLVYGVFAFILFAVLSLFVFFDMLNELENVNNQYTSLVALFHVL-LQAPTR 62 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + V + + +E I G + + + LA+ L+I FI Sbjct: 63 VYEVLPIAVLISAIYVFSQLASQSEYTIFRVAGLNTRQALFSLFKLAVPLAIVTFIFGEF 122 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD----------LYIKISKYNPNNTL 170 I P+ +++ +A A S ++ + D ++ ++ P+ T+ Sbjct: 123 IAPRAEQYAQKIKLEAIGATVSSGFRSGVWVKDRDKDAATGGGEITRFVNVAGLRPDQTI 182 Query: 171 QGIFIVDSRDT-QTHKIYYAQSGSIDLDRQAIILNDGEVHR--------------KSPIS 215 GI + + + I AQ G Q L R + ++ Sbjct: 183 TGITMYEFDPQYRLRMIRVAQEGRYQ-GGQLWELQGVNETRFIELASPAQGAKPARDSLA 241 Query: 216 KDIS--IMKFKSYTLQTE-SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEF 272 D +KF T+ +E + +++L ++ + L + + + Y F Sbjct: 242 PDFRAEQVKFPRVTMHSELTPQILSVLLVTPERMSTLDLFRYIRHLRDNKQDTQRYEIAF 301 Query: 273 HKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN 332 K++ L + +++ A + + + G+ G S+ H Sbjct: 302 WKKVIYPLTLFVMMALALPFAYL--------HARAGAVGVKVFGGIMLGLSF--HLSNTL 351 Query: 333 PYYIPILYLFLFCISSIF 350 ++ +L+ + IS++ Sbjct: 352 FSHVGLLHTWPPIISALV 369 >gi|312113657|ref|YP_004011253.1| permease YjgP/YjgQ family protein [Rhodomicrobium vannielii ATCC 17100] gi|311218786|gb|ADP70154.1| permease YjgP/YjgQ family protein [Rhodomicrobium vannielii ATCC 17100] Length = 363 Score = 83.1 bits (204), Expect = 7e-14, Method: Composition-based stats. Identities = 55/365 (15%), Positives = 124/365 (33%), Gaps = 25/365 (6%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y+ + + L + + + + ++ + + S L I+ IP Sbjct: 5 TTVGRYMAKRFAITILGVFFVTLLLIFFVDFVEVLRSGARKDVSAGTLALITLLRIPIFA 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF + T S++R +EL I+ G S ++P L +AI +F N + Sbjct: 65 ELTLPFAILIGTIAAFLSLSRTSELTIMRAAGLSVWQFVQPALIVAIFFGVFAVTVYNPV 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLF----FRLDDDLYIKISKYNPNN--TLQGI-F 174 ++ +++ A+ + D I +K + + TL G+ Sbjct: 125 ASAMKAKSEKIQAEIFQSEKSFATSRGTGSWLRQESVDGPTILHAKTSADRGLTLAGVTL 184 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + + ++ A + + +G + + S + + ++ Y + T Sbjct: 185 LQFDPANRFYEQIQANKAELRQGYWRL---EGVIVQSSGDA----VRRYDEYFVSTYLGP 237 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRL-TQWLFPVIFGLISIVAA 293 + + + + LSF P + L H+ + + ++ ++ I A Sbjct: 238 AQIMNSLGSLETLSFWDLPGFIAFAGKAGLPTRQYELQHQLFLARPI--LMAAMVLIAAT 295 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP-------YYIPILYLFLFCI 346 R K + L+ FG F FS + K+ + + P L L Sbjct: 296 CSLKAFRFGKIQTMVLTGLTGGFGFFI-FSELSRKVGASGLVPVTVAAWGPALVALLLSA 354 Query: 347 SSIFL 351 + + Sbjct: 355 TVLLY 359 >gi|33598433|ref|NP_886076.1| hypothetical protein BPP3926 [Bordetella parapertussis 12822] gi|33574562|emb|CAE39209.1| putative membrane protein [Bordetella parapertussis] Length = 422 Score = 83.1 bits (204), Expect = 7e-14, Method: Composition-based stats. Identities = 51/345 (14%), Positives = 117/345 (33%), Gaps = 23/345 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M++ Y+ R I RS + L ++ + ++ ++ V S+ L + +PT Sbjct: 31 MRTARRYLAREIYRSCAVVLLALLGLFTFFALVDDLDNV-GDKFSMLALFYMQALALPTR 89 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L + + EL+I+ +G S + L+ + + I L I + Sbjct: 90 LYDLLPIGLLIGAILALAGLAQRNELVILRVSGVSGMRLLGMLWVITIPLMIGATLLSEF 149 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLD----DDLYIKISKYNPNNTLQGIFIV 176 + P + + L +F+ I I + ++ + + Sbjct: 150 VTPAAEIKSGEADLTFRGKAGGGRLNSGYWFKEPTPQNGTRIINIKTLLADGQVKDVTLY 209 Query: 177 DSR-DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + R D + ++ A +G ++L D R + + L Sbjct: 210 EFRSDLEMTALWTAPNGRFSRGD--LVLTDVSETRIDEHAPSALADAKQPKELPARVTKV 267 Query: 236 STIVLKAN---DQNLSFLLNPNPNNPNYRPELLETYR----------SEFHKRLTQWLFP 282 + L ++ L+ +L P + + +E R ++L Sbjct: 268 PELKLDTTLSPERLLARVLTPERMSALTLVDYIEYLRHNQLQYDRQVVALWRKLVYPFTL 327 Query: 283 VIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH 327 ++ +I++ A R+ +FI + + G F ++ Sbjct: 328 LV--MITVAAPIGFMQTRRGGVGAKVFIGILLGVGFFMLNQLALN 370 >gi|313672807|ref|YP_004050918.1| permease yjgp/yjgq family protein [Calditerrivibrio nitroreducens DSM 19672] gi|312939563|gb|ADR18755.1| permease YjgP/YjgQ family protein [Calditerrivibrio nitroreducens DSM 19672] Length = 364 Score = 83.1 bits (204), Expect = 7e-14, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 79/207 (38%), Gaps = 3/207 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+LY L+ + R+F++ F+ I + ++ + + P Sbjct: 1 MNKFQLYFLKILIRNFIVVEAFVYIIYMFFMFFTQSKYIARYGATFKDIFIYDVMRSPVF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P F + + R TE+ + G S ++++K ++FL+ +S+ +F Sbjct: 61 VSQTLPVSFIVAVVVTFIILIRTTEITAYVSIGGSLLSILKVLIFLSFSVSLVMFFLTEF 120 Query: 121 IEPKCRSTIKQLSAK-AQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGI-FIVD 177 + PK + K + N F+ D + +I++ + N L I FI Sbjct: 121 VVPKSQVKSNDYKTKYIEKREEVRVTTLNNFWIKDKNSFIQVGTIDIINKKLFDIKFIDL 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILN 204 + + K+ Y ++ +L Sbjct: 181 DENGKIVKVRYISQADYIEGKKWSVLE 207 >gi|194364316|ref|YP_002026926.1| permease YjgP/YjgQ family protein [Stenotrophomonas maltophilia R551-3] gi|194347120|gb|ACF50243.1| permease YjgP/YjgQ family protein [Stenotrophomonas maltophilia R551-3] Length = 368 Score = 82.7 bits (203), Expect = 8e-14, Method: Composition-based stats. Identities = 52/366 (14%), Positives = 117/366 (31%), Gaps = 17/366 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+LY+ + + + L++ +V + V+ + + SL Y +P Sbjct: 7 RFDLYLGQSVFTTVLLTWTVLVGLDVVMAFSGEFKDIGKNGYSLGHAAAWVLYTVPRRAY 66 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + L + +EL + G SR L V LL+ + +S + Sbjct: 67 TFFPTAAVIGALMGLGQLAATSELTALRALGLSRKRLSVSVAIALSLLTAVMVLSAETLG 126 Query: 123 PKCRSTIKQLSAKAQ-------LALTFSYLEEN-LFFRLDDDLYIKISKYNPNNTLQGIF 174 P + L + A+ + + E F + L+ + Sbjct: 127 PWGQDRADALKSSAKWGQDISTARYSGLWAREGDTFLSAAGGEEQLVGDKGTRLILRDVR 186 Query: 175 IV-DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 + + D Q + +A + D +L S + + + + ++ Sbjct: 187 LYRIAEDGQIASLTHAATAE--HDNDGWVLTGVRRDTFGERSATREEVAREPWNSKLDAG 244 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 +T + K + +++ L + Y + R W +PV + + A Sbjct: 245 ALATGIAKPRNLSVAEL-RTSIEYRERNGLDARDYEDVYWSR---WFYPVNVLALCLAAV 300 Query: 294 D-KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY-LFLFCISSIFL 351 +R +F+ + + G + + + I Y L + +I Sbjct: 301 PFAFGSLRSGGMGKRLFLGILFALGFWLLQLFFGRMAGALKFDYRIAYALPPIVMLAISG 360 Query: 352 LMIKKK 357 L+ ++K Sbjct: 361 LLFRRK 366 >gi|33591556|ref|NP_879200.1| hypothetical protein BP0325 [Bordetella pertussis Tohama I] gi|33571198|emb|CAE40702.1| putative membrane protein [Bordetella pertussis Tohama I] gi|332380956|gb|AEE65803.1| hypothetical protein BPTD_0320 [Bordetella pertussis CS] Length = 392 Score = 82.7 bits (203), Expect = 8e-14, Method: Composition-based stats. Identities = 55/354 (15%), Positives = 119/354 (33%), Gaps = 41/354 (11%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M++ Y+ R I RS + L ++ + ++ ++ V S+ L + +PT Sbjct: 1 MRTARRYLAREIYRSCAVVLLALLGLFTFFALVDDLDNV-GDKFSMLALFYMQALALPTR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L + + EL+I+ +G S + L+ + + I L I + Sbjct: 60 LYDLLPIGLLIGAILALAGLAQRNELVILRVSGVSGMRLLGMLWVITIPLMIGATLLSEF 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLD----DDLYIKISKYNPNNTLQGIFIV 176 + P + + L +F+ I I + ++ + + Sbjct: 120 VTPAAEIKSGEADLTFRGKTGGGRLNSGYWFKEPTPQNGTRIINIKTLLADGQVKDVTLY 179 Query: 177 DSR-DTQTHKIYYAQSGSIDLDRQAIILNDGEVHR------------KSPISKDISIMKF 223 + R D + ++ A +G ++L D R K P + K Sbjct: 180 EFRSDLEMTALWTAPNGRFSRGD--LVLTDVSETRIDEHAPSALADAKQPKEPPARVTKV 237 Query: 224 KSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYR----------SEFH 273 L T + ++ L+ +L P + + +E R Sbjct: 238 PELKLDTTLSP---------ERLLARVLTPERMSALTLVDYIEYLRHNQLQYDRQVVALW 288 Query: 274 KRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH 327 ++L ++ +I+I A R+ +FI + + G F ++ Sbjct: 289 RKLVYPFTLLV--MITIAAPIGFMQTRRGGVGAKVFIGILLGVGFFMLNQLALN 340 >gi|295689677|ref|YP_003593370.1| permease YjgP/YjgQ family protein [Caulobacter segnis ATCC 21756] gi|295431580|gb|ADG10752.1| permease YjgP/YjgQ family protein [Caulobacter segnis ATCC 21756] Length = 367 Score = 82.7 bits (203), Expect = 8e-14, Method: Composition-based stats. Identities = 58/365 (15%), Positives = 118/365 (32%), Gaps = 30/365 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSST-ESLNILLKISGYLIPT 59 M E Y+L+ + + + + + +I + V + + LL ++ P Sbjct: 4 MGMLERYVLKRSMSALVGALAVLGAMVMLIAFVDIARNVGTRADVNFFQLLYLTVLQAPA 63 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + ++ PF F T +NR +EL+ + G S I P + ++ + N Sbjct: 64 TILVLAPFVFLFGTMWAFVELNRRSELIAMRAAGVSAWRFIMPAATASFVIGLLTITLLN 123 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLY-IKISKYNPNN-----TLQGI 173 + + + + + R DD I I + L+G+ Sbjct: 124 PLTTAMTARFETERDHMMNGYLNNAPR-GTWLRQGDDKTQIVIRARGRDMIDGSVRLRGV 182 Query: 174 --FIVDSRDT---QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 F+ + A ++ + V +P + I S ++ Sbjct: 183 SLFVYTLNKKGVMDFTRRIEANEARLEPGFWRLT----GVREATPGAGAIRS---DSLSI 235 Query: 229 --QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLF-PVIF 285 + +S L L R E + F RL Q L P++F Sbjct: 236 PSNLDDRTASERFNTPQAVALWRL-----PATIKRAEDAGFSAAPFKLRLQQDLATPLLF 290 Query: 286 -GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 + + AA L+R +++ FG F+ F+ + + + P + + Sbjct: 291 SAMSVLAAAFSLRLMRLGGLAALAGSGVALGFGFFF-FNELCSTLGKADVLAPSIAAWTP 349 Query: 345 CISSI 349 I +I Sbjct: 350 PIVAI 354 >gi|258405421|ref|YP_003198163.1| permease YjgP/YjgQ family protein [Desulfohalobium retbaense DSM 5692] gi|257797648|gb|ACV68585.1| permease YjgP/YjgQ family protein [Desulfohalobium retbaense DSM 5692] Length = 358 Score = 82.7 bits (203), Expect = 8e-14, Method: Composition-based stats. Identities = 58/365 (15%), Positives = 126/365 (34%), Gaps = 19/365 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+LR L+S + I +I I R++ + + + IP + Sbjct: 1 MTTLHRYLLRQNLYYLLLSLGAGIGIYLLIDIFDRLDDFVGAQAGVEATVLYFAAKIPLI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P F + L+ M R EL ++ G L L A+ S Sbjct: 61 VSQVLPAVFLLSLLAQLSIMRRQQELTALEAGGIPLSRLAVFFLVYAVFWSGLQLGFSEG 120 Query: 121 IEPKCRSTIKQ-LSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP---NNTLQGIFIV 176 + + + +++F+ + + + + P ++++ Sbjct: 121 LGVVGQRKSEAIWEQDVHGHAPSQRTLRDVWFKSEH-FVVHMHRVTPRQKTGRKITVYVM 179 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 D ++ I+ A+ + +L+ EV P + S LQ + A+ Sbjct: 180 DEDFSRIRTIHRAER--FQQQTDSWVLS--EVTSLKPHAFTTSAQDRLPLPLQQDLADFL 235 Query: 237 TIVLKANDQNLS-FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + KA ++LS + L + +E + +H +L V+ L+++ Sbjct: 236 AVDPKAEPESLSLWQLGHLISELRQSGSNVERLATTWHMKLAYGFSLVVMALLAL----- 290 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ---NPYYIPILYLFLF-CISSIFL 351 + I I L++ F + F E+ +P+ L ++ ++ L Sbjct: 291 GIVSASGNIYVNIPIGLTVIFVYYALFVLGGTLGEKGIVSPWIGGWLGNMVWGGAGALRL 350 Query: 352 LMIKK 356 + I + Sbjct: 351 VWIAR 355 >gi|8925955|gb|AAF81687.1|AF233069_10 unknown [Galdieria sulphuraria] Length = 142 Score = 82.7 bits (203), Expect = 8e-14, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 49/138 (35%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YIL+ + F++S I + +L + I KI Y P + Sbjct: 3 TIIDRYILQLLIGPFVISSSAFTSITLSVGVLFELVRRVVEGLPFKIAGKILLYKSPYFI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P T + N EL+ + G S ++ + L++I F ++I Sbjct: 63 FLSFPLASLFATLITFNQLANNKELIGFRSLGISNYKWLRSTIIFGTLIAISSFFINDLI 122 Query: 122 EPKCRSTIKQLSAKAQLA 139 P +L +++ Sbjct: 123 VPVSNHRANELLRESKEN 140 >gi|332297891|ref|YP_004439813.1| permease YjgP/YjgQ family protein [Treponema brennaborense DSM 12168] gi|332180994|gb|AEE16682.1| permease YjgP/YjgQ family protein [Treponema brennaborense DSM 12168] Length = 366 Score = 82.7 bits (203), Expect = 9e-14, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 54/136 (39%), Gaps = 1/136 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+ R F+ + F + ++++L + S+ ++++ +P Sbjct: 11 MTLL-SYLYRRFMPVFIGALSFFSLVLILVELLMNLWQFISAQVPAADIVRVMLLYVPKT 69 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P ++ VL+ EL + +G S P+L +++LS F+F E+ Sbjct: 70 VSFALPLAILFASSYVLSDFYAKNELTAVFASGVSLFRFTLPLLVFSVVLSAFMFFFEDR 129 Query: 121 IEPKCRSTIKQLSAKA 136 + + +L K Sbjct: 130 VVVPAYAQKTELQQKL 145 >gi|90416561|ref|ZP_01224492.1| permease YjgP/YjgQ [marine gamma proteobacterium HTCC2207] gi|90331760|gb|EAS46988.1| permease YjgP/YjgQ [marine gamma proteobacterium HTCC2207] Length = 356 Score = 82.7 bits (203), Expect = 9e-14, Method: Composition-based stats. Identities = 51/360 (14%), Positives = 123/360 (34%), Gaps = 8/360 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M ++ + + + ++ L +V + V I+ + V+ + + ++ + +P+ Sbjct: 2 MHRLSWHVGKTVFAAIAVTLLVLVGLDSVGAIIDQSADVTRNYFFADAMIYVVTL-VPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + PF + L + N+E++++ G S + ++ VL ++ I Sbjct: 61 IYEYIPFASLIGCLVGLGLLAGNSEVIVMRAAGVSPLRIVGFVLKPVLIFIILGMTIGEY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF---IVD 177 P + + + L+ R + + ++ + P L G+ D Sbjct: 121 FSPYLDQLAEGKREYLRKGESAQDSSSGLWNR-EGNQFVHANAVFPGGVLYGVTRYQFND 179 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 R Q +A + + + I + V R S + + + + + Sbjct: 180 ERQIQEAS--FASRATFNSTERYWIEENVSVTRFLGDSTERDKLITRRWDSELTPNVLML 237 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +L A+ ++ L + + +Y ++ Q L + L+ I Sbjct: 238 NILPADSLSIESLYS-YIAFLELQNIDTASYEVALWRKALQPLIIIGLVLLGISFVFGPL 296 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I + ISF +F + + Q P + +L LFC+ L+ + Sbjct: 297 RDSTMGFRIFIGVVFGISFRIFQDMLGPLSVVFQFPPLLAVLVPILFCVLVGVFLLRRSG 356 >gi|325917725|ref|ZP_08179913.1| putative permease [Xanthomonas vesicatoria ATCC 35937] gi|325536054|gb|EGD07862.1| putative permease [Xanthomonas vesicatoria ATCC 35937] Length = 368 Score = 82.3 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 49/369 (13%), Positives = 115/369 (31%), Gaps = 27/369 (7%) Query: 5 ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 + Y+ R + + L++ ++ + V + + S + Y +P + Sbjct: 9 DWYVGRVVLFTVLLTWAVLLGLDLVNAFASEAKNIGQGSYSFGHAVAFVAYTVPRRAYTL 68 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P + L + +EL + G SR + V+ LL+ + IS + P Sbjct: 69 FPTAAVIGALMGLGQLAATSELTALRALGVSRKRMSASVVAAMALLTASMVISGETVGPW 128 Query: 125 CRSTIKQLSAKAQLALTFSYLEE--------NLFFRLDDDLYIKISKYNPNN----TLQG 172 ++ L A+ + N F K N +L Sbjct: 129 AQNQADTLKTSARYNSDMAMARYSGLWAREGNTFLNALGG----EEKLLANGGTALSLHD 184 Query: 173 IFIVD-SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 + + + + + ++ YA R + +V R + + + F Q++ Sbjct: 185 VRLYNLDTNGRLQQLTYASVAEHRDGRWTLR----QVRRDTFQDRSVQRETFPELPWQSQ 240 Query: 232 SANSSTIVLKANDQNLSFL-LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 + ++ A +NLS L + Y ++ R W +P+ + + Sbjct: 241 LSPAALASGLAKPRNLSAHELQQSIEYRRRNGLDARDYEDQYWSR---WFYPLNVLALCM 297 Query: 291 VAAD-KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-NPYYIPILYLFLFCISS 348 A +R +F+ + + G + + Y L + Sbjct: 298 AAIPFSFGSLRSGGLGKRLFLGILFALGFWLLQLFFGRMAGALKLDYRIAYALPPMVMLG 357 Query: 349 IFLLMIKKK 357 + + +++ Sbjct: 358 VSAWLFRRR 366 >gi|30468062|ref|NP_848949.1| probable permease YjgP/YjgQ family [Cyanidioschyzon merolae strain 10D] gi|30409162|dbj|BAC76111.1| probable permease YjgP/YjgQ family [Cyanidioschyzon merolae strain 10D] Length = 329 Score = 82.3 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 50/366 (13%), Positives = 130/366 (35%), Gaps = 45/366 (12%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M FE YI + FL + + + + L + + SL++ +I + Sbjct: 1 MTIFEQYIWSHLWTPFLYALSACLALTFSAGALVDVMRQITQGLSLDMACQILCLQLVLS 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P ++ +L+ + +G +KP L ++ + Sbjct: 61 IHLGLPASCVFGGIFAYANL----DLMALRTSGIGVARWLKPSLIFGCMVGWLAWQWNEW 116 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P ++ +L + Q +T L + I + ++ P + + D Sbjct: 117 ALPLANYSLHKLQDQIQNQITSKAL-----VNQINHKLIYVKEWKPLHMNHCVMW----D 167 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ ++++ A+ ID D I ++ + LQ +S + Sbjct: 168 SEMNQLWMAK--QIDWDGARWIAKQVVHYQWD-----------DQFQLQLQSHVAK---- 210 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYR--SEFHKRLT-----QWLFPVIFGLISIVAA 293 + +++ + L+ Y+ +EF+K + ++ FP+ GL+ ++ + Sbjct: 211 --MEWPTAWISQQQWQPMWMNVQTLKCYKQVAEFNKHIAIRYYQKYAFPISCGLLHLIGS 268 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 ++ ++ +SL + FG + F + + ++ ++ ++ F+L Sbjct: 269 SLASVSKKG-----FILSLIVLFGYYL-FGFGCEALAESSQMSALMAGWMPVAGLFFVLC 322 Query: 354 IKKKYT 359 + K Sbjct: 323 LCMKQA 328 >gi|323697853|ref|ZP_08109765.1| permease YjgP/YjgQ family protein [Desulfovibrio sp. ND132] gi|323457785|gb|EGB13650.1| permease YjgP/YjgQ family protein [Desulfovibrio desulfuricans ND132] Length = 375 Score = 82.3 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 49/366 (13%), Positives = 114/366 (31%), Gaps = 16/366 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + Y++R + + + I R++ + +L IP + Sbjct: 2 IGVLSRYLIRQNLYLMAICLAVGTSLYLLSDIFDRLDDFIRAGLGAQTILFYFIVKIPLI 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P F + L + R+ E+L + G S I+ + A++ S + Sbjct: 62 VSQLMPAVFLLAMVVQLGVLARSREMLALRAGGVSFAWFIRFFVIYALIWSCGQLVFSQF 121 Query: 121 IEPKCRSTI-KQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-- 177 + + + NL+FR + + I I + Sbjct: 122 LGVFGEQEANRIWKEDVRKKQLDELTIHNLWFRDGPFIVQAKEAQPSKSRASDITIYEFT 181 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPIS--KDISIMKFKSYTLQTESANS 235 + + + +I A+ ID ++ +VH + +F S ++ + Sbjct: 182 TDNQELIRILNAKKALIDDHGWGLL----DVHELDTRTFITVDRPSQFLSVRQNLKAYAA 237 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + L L +E + +H +L+ V+ L+++V Sbjct: 238 VELKGDTAQLPLIELSR-AIARLQESGSNVEMLLTIWHGKLSYAFSMVVMALLALVLV-- 294 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 I ++L + F + +G + + PIL +L L ++ Sbjct: 295 ---TFSENVYANIGLALILIF-IQYGMHVVGATAGEKGVLPPILAAWLGNGIMAALASLR 350 Query: 356 KKYTKI 361 + + Sbjct: 351 LAWVAM 356 >gi|46446271|ref|YP_007636.1| hypothetical protein pc0637 [Candidatus Protochlamydia amoebophila UWE25] gi|46399912|emb|CAF23361.1| conserved hypothetical protein [Candidatus Protochlamydia amoebophila UWE25] Length = 383 Score = 82.3 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 54/340 (15%), Positives = 116/340 (34%), Gaps = 31/340 (9%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y + + + I ++ L I ++ ++ +L + Y IP +LP Sbjct: 4 ILWRYSINHFLKIVFACVFAFISILLTMR-LDEIANFAALGAPISYILLFAFYQIPYILP 62 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + + + ++ EL + G + L+ P+L A L+IF F + + Sbjct: 63 IALPLSCLIASLIFVQRLSNTHELTALRACGFALKDLLAPILLTAAFLTIFNFWIVSEVA 122 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI------KISKYNPNNTLQ----- 171 + L ++ + L RL LY ++ + + Sbjct: 123 TQTHLQTNILKSELRSINPLLLLNNKHLMRL-KGLYFDSLGPSRVGEMATDAVFAIPSQH 181 Query: 172 ----GIFIVDSRDTQTHKIYYAQSGSIDLD---RQAIILNDGEVHRKSPISKDI----SI 220 +FI + I+ AQ ++ Q +D + + + I Sbjct: 182 HQRINLFIAKQLKA-SSSIFTAQGATLLTTTSLNQENTFDDLLIENMKKSTTHVEDFSQI 240 Query: 221 MKFKSYTLQTESANSSTIVLKANDQNLSF----LLNPNPNNPNYRPELLETYRSEFHKRL 276 ++ K +T+ + ++++A +Q + L N P SE KR Sbjct: 241 LQKKVWTVNNDYLKLPLLLIRAQEQKQALRQAKLENKKPVIVKDLKGQFHKSLSEIAKRS 300 Query: 277 TQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISF 316 + + F L+ + RQRK + + + + +F Sbjct: 301 SIAFAVISFTLMGTAFGM--NISRQRKHKNLLIVIILTTF 338 >gi|296283031|ref|ZP_06861029.1| permease [Citromicrobium bathyomarinum JL354] Length = 365 Score = 82.3 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 96/303 (31%), Gaps = 10/303 (3%) Query: 43 TESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKP 102 + L + +P ++ P+ + T L ++N+N+E++ + G S ++ P Sbjct: 51 GNTEADLWLYASLRVPMLIQRFLPYSVLLATIITLVTLNQNSEVIAMKAAGLSAHQVLAP 110 Query: 103 VLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS 162 ++ A+L++ F + + + + A AL + + D + Sbjct: 111 LIVTALLVAGISFAFNERVVTRATAQLTAWEATEFGALPDKPKSKGSIYLEDGQNILTAR 170 Query: 163 KYNPNN---TLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDIS 219 Y+ TL+ + R + + + V + + ++ Sbjct: 171 SYSGGGPAPTLRDVTYY-RRSPTAEITQKVDAPMAVHGPDGWAMQNPSV--FTVGTASLA 227 Query: 220 IMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQW 279 + A + Q L + E + + +++ Sbjct: 228 QPSQLTVAPGITPATIELQEIDPTTQPFWQL-GSSIEAYRQAGRDTEELEANYWHKISGP 286 Query: 280 LFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL 339 L V+ ++ VA L R + I +++ F F + + + Y P L Sbjct: 287 LAAVLMPILGAVAGFG--LARSGQLFMRALIGMALGFAYFVIDNAAL-AMGDFGGYPPFL 343 Query: 340 YLF 342 + Sbjct: 344 AAW 346 >gi|326565139|gb|EGE15330.1| putative ABC transporter permease protein YjgP/YjgQ [Moraxella catarrhalis 103P14B1] gi|326572842|gb|EGE22827.1| putative ABC transporter permease protein YjgP/YjgQ [Moraxella catarrhalis CO72] gi|326574664|gb|EGE24600.1| putative ABC transporter permease protein YjgP/YjgQ [Moraxella catarrhalis 101P30B1] Length = 369 Score = 82.3 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 49/370 (13%), Positives = 115/370 (31%), Gaps = 20/370 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R + + + + + V L ++ + S T +L L Y P L Sbjct: 5 ILPKYVIRSALLAMAGAVVGLWLVQMVFAYLAELDNI-SETYTLTDALLFILYRSPYFLV 63 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + L + ++EL+++ G S ++ + A++ + Sbjct: 64 QFIPTGTLLGAVIGLGLLANHSELIVMRAAGMSIYRIVSWAMLPAVIFVAISLGVNQFVL 123 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD---LYIKISKYNPNNTLQGIFIVDSR 179 P + A + + + D + IS + L + + Sbjct: 124 PTANQYATAIRADTIYDKLITI--DGYWSVNHDGDSQDVVYISYADNEGGLGEVKRYQLK 181 Query: 180 DTQTHKIYYAQSG--------SIDLDRQAIILNDGEVHRKSPISKDISIM--KFKSYTLQ 229 D Q A+SG ++ + + + + + K TL Sbjct: 182 DGQLIAALKAKSGVYLPQSDDVMNAQKARYTWQLSGIDEIGIGTSQVQQAHSEGKILTLP 241 Query: 230 TESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 + + + D +LS L + L + F ++L + L++ Sbjct: 242 IAPTDVYLLTKEPEDLSLSSLYAHRQLMAHQGTRSLRHELA-FWQKLLSPFAVLSLVLVA 300 Query: 290 --IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCIS 347 V R+ + + + L S+ + +P + ++ + L ++ Sbjct: 301 SSFVFGSLRSQGLGLRVVLALLTGLLFSYLTDLTGFVAL-ATGLSPLLMALVPIVLSAMA 359 Query: 348 SIFLLMIKKK 357 ++LL K Sbjct: 360 GMYLLNRKSS 369 >gi|269213540|ref|ZP_06158031.1| permease, YjgP/YjgQ family [Neisseria cinerea ATCC 14685] gi|269146392|gb|EEZ72810.1| permease, YjgP/YjgQ family [Neisseria cinerea ATCC 14685] Length = 181 Score = 82.3 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 22/154 (14%), Positives = 54/154 (35%), Gaps = 5/154 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +I+ + + + + + + +P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEIINEVGDLGKGSYNGATMAQYVLMQMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + +EL +I +G S L+ + ++ +I Sbjct: 61 AYELMPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLVLSQFGLIFAIATAALGEW 120 Query: 121 IEPKCRSTIKQLSA-----KAQLALTFSYLEENL 149 I P + + + K T +L+E Sbjct: 121 IAPVLSQKAENIKSTAINGKISTGNTGLWLKEKT 154 >gi|260427738|ref|ZP_05781717.1| permease, YjgP/YjgQ family [Citreicella sp. SE45] gi|260422230|gb|EEX15481.1| permease, YjgP/YjgQ family [Citreicella sp. SE45] Length = 364 Score = 81.9 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 51/362 (14%), Positives = 132/362 (36%), Gaps = 19/362 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y R F+ ++ ++++I S ++I+ +P + Sbjct: 2 ILHRYFARRFFWMFMSILSVFAIFVGLVDLVEQIRKFGGD-ISFAQKVQITALRLPEGMY 60 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + T + + R++EL+++ G S +T + + +A+ +S N + Sbjct: 61 EILPLVMILATAALFLMLARSSELVVVRAAGRSGLTALMGPMMVALAISGVTVAMLNPLV 120 Query: 123 PKCRSTIKQLSAKAQLALTF--SYLEENLFFR---LDDDLYIKISKYNPNNT-LQGI-FI 175 L+ + S +E L+ R D I+ ++ NP+ T L + F+ Sbjct: 121 AATSKRASDLAESYENDGASVISIGKEGLWLRQGSSDGQAVIRAARANPDATVLYDVSFL 180 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVH-RKSPISKDISIMKFKSYTL--QTES 232 + D + A +++ A L D +V + + + + + + Sbjct: 181 QYAEDGGPIRRVEAAEAALEDG--AWALRDAKVWPLGTRANPEAAAERHDRLRIASDLTQ 238 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPEL-LETYRSEFHKRLTQWLFPVIFGLISIV 291 + K + + L P+ N + + F L + +F + ++ + Sbjct: 239 NDIRDRFGKPSAVAIWDL--PDFINGLEQAGFSARRHEVWFQMELARPIF--LVAMVLVA 294 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 A R + + ++ + FG+++ ++ + +N P+ ++ ++S+ L Sbjct: 295 AGFTMRPARLGRTGLYVLAAVLLGFGLYYVRNF-AQIMGENGQLPPLFAAWVPPVASLML 353 Query: 352 LM 353 + Sbjct: 354 AL 355 >gi|166713423|ref|ZP_02244630.1| hypothetical protein Xoryp_18790 [Xanthomonas oryzae pv. oryzicola BLS256] Length = 368 Score = 81.9 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 53/366 (14%), Positives = 115/366 (31%), Gaps = 21/366 (5%) Query: 5 ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 + Y+ R + + L++ ++ + V + + S + Y +P + Sbjct: 9 DWYVGRVVLSTVLLTWAVLLGLDLVNAFASEAKNIGQGSYSFGHAVAYVAYTVPRRAYTL 68 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P + L + +EL + G SR + V+ LL+ + IS I P Sbjct: 69 FPTAAVIGALMGLGQLAATSELTALRALGVSRKRMSASVVAALALLTAIMVISGETIGPW 128 Query: 125 CRSTIKQLSAKAQLAL-TFSYLEENLFFRLDD----DLYIKISKYNPNNT---LQGIFIV 176 ++ L A+ + L L+ R D L + + T L + + Sbjct: 129 AQNQADTLKTSARYNSDMAASLYAGLWAREGDTFLNALSGEEKLLDGGGTALDLHDVRLY 188 Query: 177 --DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 DS Y A + +V R + + + F Q+ Sbjct: 189 HLDSSGRMQQLTY-ASVAEHRDGHWTLR----QVRRDTFQERSVQRETFPELPWQSLLNP 243 Query: 235 SSTIVLKANDQNLSFL-LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 ++ A +NLS L + + Y ++ R W +P+ + + A Sbjct: 244 AALAAGLAKPRNLSAHDLEQSIEYRSRNGLDARDYEEQYWSR---WFYPLNVLALCMAAI 300 Query: 294 D-KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-NPYYIPILYLFLFCISSIFL 351 +R +F+ + + G + + Y L + + + Sbjct: 301 PFSFGSLRSGGLGKRLFLGILFALGFWLLQLFFGRMAGALKLDYRIAYALPPMVMLGVSV 360 Query: 352 LMIKKK 357 + +++ Sbjct: 361 WLFRRR 366 >gi|300703336|ref|YP_003744938.1| permease [Ralstonia solanacearum CFBP2957] gi|299070999|emb|CBJ42308.1| putative permease, predicted YjgP/YjgQ family [Ralstonia solanacearum CFBP2957] Length = 401 Score = 81.9 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 49/398 (12%), Positives = 122/398 (30%), Gaps = 46/398 (11%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M +E Y R I F+ ++ + +L + V +L + PT Sbjct: 7 MPVYEKYFARQIYGVFVFILFAVLALFIFFDMLSELGSVVGRYTTLIAFFHVM-LQAPTR 65 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + V + M +E I G + + +A+ L++ ++ Sbjct: 66 VYEVIPVAALISAIYVFSQMASQSEFTIFRVAGLDTRGALLSLFKIALPLALVTYVFGEF 125 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRL-----DDD------LYIKISKYNPNNT 169 I PK +++ +A A + ++ + D ++ + P+ T Sbjct: 126 IGPKSEQFAQKVRLEALGATVSAEFRSGVWVKDRGPARPDGSGGEVTRFVNVGSLQPDQT 185 Query: 170 LQGIFIVD-SRDTQTHKIYYAQSGSIDLDRQAIILNDGE------------------VHR 210 ++ + I + D + I AQ Q+ L+D + Sbjct: 186 IRSLRIYEFDADYRLSSIRVAQQARYQ-GHQSWELDDVTETHFVEFPRKAGAAMPQDNRQ 244 Query: 211 KSPISKDISIMKFKSYTLQTE--------SANSSTIVLKANDQNLSFLLNPNPNNPNYRP 262 P + D F+ + + ++++ ++ + L + Sbjct: 245 AVPGAPDALAPDFRGEQTKLPKQEMRSELTPQILSVLMVTPERMATLDLFQYIRHLRDNK 304 Query: 263 ELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGF 322 + + Y K++ ++ +++ A R +F + + Sbjct: 305 QDTQRYEIALWKKVVYPFTVLVMMALALPFA--YLHARAGAVGLKVFGGIMLGLSFQLVN 362 Query: 323 SYIIHKIEQNPYYIPILYLFL----FCISSIFLLMIKK 356 + H N + + ++ I L +++ Sbjct: 363 NLFSHVGLLNTWPAIFTAIVPGALYLAVALIALRWVER 400 >gi|291276764|ref|YP_003516536.1| YjgP/YjgQ family permease [Helicobacter mustelae 12198] gi|290963958|emb|CBG39797.1| putative integral membrane protein, permease YjgP/YjgQ family [Helicobacter mustelae 12198] Length = 338 Score = 81.9 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 58/355 (16%), Positives = 130/355 (36%), Gaps = 25/355 (7%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 F+ Y+ I + F + + FI+ V+ ++ N+ + LL + YL+P + Sbjct: 2 FKNYLFGSIAQIFFPFFIVLFFISSVVLLISIANITLVVKMNFMDLLLVFLYLMPGTVFF 61 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 + P F L+ ++ + ELL+ + G S ++ + +A ++S+ L + P Sbjct: 62 IIPITFFAACVLGLSRLSFDYELLVFFSLGVSPRKILAYFIPIAGIVSLVLLFFSLALIP 121 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 +S A+ + + + + + D + I +N + + + D Sbjct: 122 LSKSAYSDFIAEKRTKIDVN-IRAGDLGQKLGDWLVYIDSI-KDNEYRDLVLFSGSDLGQ 179 Query: 184 HKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 AQ G ++ + L +G+ + + ++ + F++ +Q+E + Sbjct: 180 ESFVVAQKGRVENLAGVFRLSLQNGDAY--FAKNNELQKVNFQNMMIQSEIKKINLSSYD 237 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 Y E +S+ +R +Q + +F L SI + Sbjct: 238 L---------------VAYWKSAFEGKKSQA-RRFSQAIMTSLFPLASIFFIPLFGIANP 281 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R + + +S G+ +H + +N + I L L + KK Sbjct: 282 RFQRN---LSYVYILSAVVGYFAGVHILSENAPFFGIFALPLAWFFLGYYFFRKK 333 >gi|83746688|ref|ZP_00943737.1| Hypothetical membrane spanning protein [Ralstonia solanacearum UW551] gi|207742607|ref|YP_002258999.1| permease protein [Ralstonia solanacearum IPO1609] gi|83726641|gb|EAP73770.1| Hypothetical membrane spanning protein [Ralstonia solanacearum UW551] gi|206594001|emb|CAQ60928.1| permease protein [Ralstonia solanacearum IPO1609] Length = 401 Score = 81.9 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 49/398 (12%), Positives = 122/398 (30%), Gaps = 46/398 (11%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M +E Y R I F+ ++ + +L + V +L + PT Sbjct: 7 MPVYEKYFARQIYGVFVFILFAVLALFIFFDMLSELGSVVGRYTTLIAFFHVM-LQAPTR 65 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + V + M +E I G + + +A+ L++ ++ Sbjct: 66 VYEVIPVAALISAIYVFSQMASQSEFTIFRVAGLDTRGALLSLFKIALPLALVTYVFGEF 125 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRL-----DDD------LYIKISKYNPNNT 169 I PK +++ +A A + ++ + D ++ + P+ T Sbjct: 126 IGPKSEQFAQKVRLEALGATVSAEFRSGVWVKDRGPARPDGSGGEVTRFVNVGSLQPDQT 185 Query: 170 LQGIFIVD-SRDTQTHKIYYAQSGSIDLDRQAIILNDGE------------------VHR 210 ++ + I + D + I AQ Q+ L+D + Sbjct: 186 IRSLRIYEFDADYRLSSIRVAQQARYQ-GHQSWELDDVTETHFIEFPRKAGAAAPQDNRQ 244 Query: 211 KSPISKDISIMKFKSYTLQTE--------SANSSTIVLKANDQNLSFLLNPNPNNPNYRP 262 P + D F+ + + ++++ ++ + L + Sbjct: 245 AVPGAPDALAPDFRGEQTKLPKQEMRSELTPQILSVLMVTPERMATLDLFQYIRHLRDNK 304 Query: 263 ELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGF 322 + + Y K++ ++ +++ A R +F + + Sbjct: 305 QDTQRYEIALWKKVVYPFTVLVMMALALPFA--YLHARAGAVGLKVFGGIMLGLSFQLVN 362 Query: 323 SYIIHKIEQNPYYIPILYLFL----FCISSIFLLMIKK 356 + H N + + ++ I L +++ Sbjct: 363 NLFSHVGLLNTWPAIFTAIVPGALYLAVALIALRWVER 400 >gi|170692023|ref|ZP_02883187.1| permease YjgP/YjgQ family protein [Burkholderia graminis C4D1M] gi|170143307|gb|EDT11471.1| permease YjgP/YjgQ family protein [Burkholderia graminis C4D1M] Length = 382 Score = 81.9 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 48/382 (12%), Positives = 128/382 (33%), Gaps = 26/382 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R + +F+ + + ++ +N V + P+ Sbjct: 1 MRIYERYFARQVYLTFIFILFAFSGLFFFFDLINELNSVGHGNYKFQYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + I L ++ + Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEYTIFRVSGLATNQALRSLLKIGIPLVFLTYLIGEV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRL-----DDD----LYIKISKYNPNNTLQ 171 + P +++ +A + S + ++ + D ++ + + P+ T+ Sbjct: 121 VGPYTDQLSERVRLEALGSSVSSNFQSGVWVKDTLTARADGEQVTRFVNVGELKPDATIS 180 Query: 172 GIFIVD-SRDTQTHKIYYAQSGSID-LDRQAII-LNDGEVHRKSPISKDI---------- 218 + I + + + A+SG + + D ++ P S Sbjct: 181 NVRIYEFDSKFRLSNVRIAKSGVYQPPGHWQLTGVTDTQLIDVPPPSGTPADALNPVYRA 240 Query: 219 SIMKFKSYTLQTE-SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLT 277 + Y+L++E + +++L + D+ F L + + + Y +++ Sbjct: 241 RQVALPEYSLRSELTPQILSVLLVSPDRMSMFNLFRYIQHLTENHQDTQRYEIALWRKVL 300 Query: 278 QWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP 337 + ++S+ A R +F + + + H N + P Sbjct: 301 YPFAVFVMLVLSLPFA--YLHTRAGVVGMKVFGGIMLGMSFQLFNTLFSHIGTLNTWPAP 358 Query: 338 ILYLFLFCISSIFLLMIKKKYT 359 + + + L ++ K+ Sbjct: 359 LTAATP-GLVYLVLGLVGLKWV 379 >gi|126725341|ref|ZP_01741183.1| putative permease [Rhodobacterales bacterium HTCC2150] gi|126704545|gb|EBA03636.1| putative permease [Rhodobacterales bacterium HTCC2150] Length = 365 Score = 81.9 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 65/367 (17%), Positives = 133/367 (36%), Gaps = 24/367 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 LY R +FLM I ++I +++++ SS++ + +++ P L Sbjct: 2 ILHLYFARKFITNFLMILFVFFGIIFLIDMVEQLRRFSSNSVGMKEAAQLALLNAPGNLY 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + T + ++ R +EL+I +G S + + L + L +F N I Sbjct: 62 RILPLLVILSTLALFLNLTRTSELVIARASGRSALGALLAPLLVTFTLGVFGVSVWNPIG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLE---ENLFF---RLDDDLYIKISKYNPNNTLQGIFIV 176 + + + + L + L E L+ ++ I ++ N N T+ G Sbjct: 122 -AATANLYETISDRHLGRASNALSIGAEGLWLRQGNVEGQTVIHANETNQNGTILGNVTF 180 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHR-KSPISKDISIMKFKSYTL--QTESA 233 + D + IY ++ + L+ +LND + K ++ ++S + L Sbjct: 181 LAFDINSQVIYRIEAKTAKLETGGWVLNDTKRWDFKDTLNPELSASTTDTIRLQSNLTQK 240 Query: 234 NSSTIVLKANDQNLSFL---LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 +D L + N + Y +E L F + LI Sbjct: 241 EIQESFGAPSDIPFWELPAFIASLENAGFSSTQHRVWYATE----LALPAFLMAMVLIG- 295 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL---YLFLFCIS 347 A R K + ++ + FG+F+ ++ ++ N IP+L + Sbjct: 296 -AMFTMRHSRFGKTGIMLLGAIVMGFGLFFLKNFA--QVLGNSGQIPVLLAAWTPPLAGI 352 Query: 348 SIFLLMI 354 + L I Sbjct: 353 LLALGFI 359 >gi|149186432|ref|ZP_01864745.1| predicted permease [Erythrobacter sp. SD-21] gi|148830021|gb|EDL48459.1| predicted permease [Erythrobacter sp. SD-21] Length = 365 Score = 81.9 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 43/324 (13%), Positives = 108/324 (33%), Gaps = 14/324 (4%) Query: 38 LVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRI 97 +++ LLK + +P ++ P+ + T L ++N+N+E++ + G S Sbjct: 46 ILAVEGNGQGELLKYASLRVPQLIQRFLPYSVLLATLISLVTLNQNSEVIAMKAAGLSAH 105 Query: 98 TLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALT-FSYLEENLFFRLDDD 156 ++ P+L A+++ F+ + + +T+K A + S + N++ + Sbjct: 106 QVLAPLLLTALVVGGVSFVFNERVVTRATATLKAWDAADWGPVPEESSVRANVYLADGSN 165 Query: 157 LYIKISKYNPNN---TLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSP 213 + + ++ + ++ + R + + + L + + R Sbjct: 166 V-LTAAQLTGSGDAIRMRDVTWY-RRSPEGTIVEQVDAARATYAGPGWRLEN--IERFEV 221 Query: 214 ISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFH 273 + S + + L + R+++ Sbjct: 222 AAAASSTGDSLVVGEGLTPDQIDLAKIDPDAVPFWEL-GERIDAFEDAGRRTGEMRAKWW 280 Query: 274 KRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFW---GFSYIIHKIE 330 +L+ L + L+ VAA L R + I +++ F F + + Sbjct: 281 HKLSGPLSSFLMPLLGAVAAFG--LARSGQLFVRALIGMALGFAYFVVDNAALAMGNFGG 338 Query: 331 QNPYYIPILYLFLFCISSIFLLMI 354 P FLF + +L+ Sbjct: 339 YPPLLAAWAPFFLFALIGETVLIR 362 >gi|207721412|ref|YP_002251853.1| permease protein [Ralstonia solanacearum MolK2] gi|206586571|emb|CAQ17158.1| permease protein [Ralstonia solanacearum MolK2] Length = 401 Score = 81.9 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 49/398 (12%), Positives = 122/398 (30%), Gaps = 46/398 (11%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M +E Y R I F+ ++ + +L + V +L + PT Sbjct: 7 MPVYEKYFARQIYGVFVFILFAVLALFIFFDMLSELGSVVGRYTTLIAFFHVM-LQAPTR 65 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + V + M +E I G + + +A+ L++ ++ Sbjct: 66 VYEVIPVAALISAIYVFSQMASQSEFTIFRVAGLDTRGALLSLFKIALPLALVTYVFGEF 125 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRL-----DDD------LYIKISKYNPNNT 169 I PK +++ +A A + ++ + D ++ + P+ T Sbjct: 126 IGPKSEQFAQKVRLEALGATVSAEFRSGVWVKDRGPARPDGSGGEVTRFVNVGSLQPDQT 185 Query: 170 LQGIFIVD-SRDTQTHKIYYAQSGSIDLDRQAIILNDGE------------------VHR 210 ++ + I + D + I AQ Q+ L+D + Sbjct: 186 IRSLRIYEFDADYRLSSIRVAQQARYQ-GHQSWELDDVTQTHFIEFPRKAGAAAPQDNRQ 244 Query: 211 KSPISKDISIMKFKSYTLQTE--------SANSSTIVLKANDQNLSFLLNPNPNNPNYRP 262 P + D F+ + + ++++ ++ + L + Sbjct: 245 AVPGAPDALAPDFRGEQTKLPKQEMRSELTPQILSVLMVTPERMATLDLFQYIRHLRDNK 304 Query: 263 ELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGF 322 + + Y K++ ++ +++ A R +F + + Sbjct: 305 QDTQRYEIALWKKVVYPFTVLVMMALALPFA--YLHARAGAVGLKVFGGIMLGLSFQLVN 362 Query: 323 SYIIHKIEQNPYYIPILYLFL----FCISSIFLLMIKK 356 + H N + + ++ I L +++ Sbjct: 363 NLFSHVGLLNTWPAIFTAIVPGALYLAVALIALRWVER 400 >gi|291296718|ref|YP_003508116.1| permease YjgP/YjgQ family protein [Meiothermus ruber DSM 1279] gi|290471677|gb|ADD29096.1| permease YjgP/YjgQ family protein [Meiothermus ruber DSM 1279] Length = 346 Score = 81.9 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 42/342 (12%), Positives = 113/342 (33%), Gaps = 15/342 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+++ +G S L + +V + + + + + ++ + + +P Sbjct: 1 MSVLDRYLIKEVGASVLGALAVVVLALLGGALYEVLAPLLARGADPWVVSQYLAFRVPEA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P F VL+ M +EL + G S++ ++ P+L L LL + + + Sbjct: 61 LVRGAPLAFLFALLLVLSRMGEESELKAMLAGGVSKLRVLFPLLLLGTLLFVICLAAADS 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ + + +A L + L+ + + + + I R Sbjct: 121 LVPRSLQQGQNVLRQAVLQKPRALLQPGTRLVDAYGRIVYVGEVSDAG------IGQVRV 174 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 +I A+ G ++ ++L+ G ++ +F+ T+ + Sbjct: 175 ITAEEILVAEQGRF--EQGTLVLSQGMRVTYGGARPR-TVARFERATVPLVELSLEPPGG 231 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + L + + H++ + F + ++ A Sbjct: 232 LFS--LTVAELRQRIAQYRAQGLPYHAELTALHRKWAEPAAVYSFAIFAVGLA----FFL 285 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 + + + +++ + + + PIL + Sbjct: 286 LGGSRSLGMLGVVVLTFIYYATWSVGRIMGEQGVLHPILAAW 327 >gi|301168568|emb|CBW28158.1| putative transport-related membrane protein [Bacteriovorax marinus SJ] Length = 368 Score = 81.5 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 57/381 (14%), Positives = 126/381 (33%), Gaps = 34/381 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M IL+ F ++ + ++ + I+ + ++ IP Sbjct: 1 MGILRKLILKEW---FKFFAGSVIALFLLVSVANLISGFLRGNVTATEVMINHFIEIPGY 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P M + + + +EL I G SR I ++F +++++I F+ + Sbjct: 58 LNKIFPVSCLMASLFSINKLKTRSELTAIFAAGYSRKNYIIDLIFASLIVTIVQFMMTSY 117 Query: 121 IEPKCRSTIKQLSAKA--------QLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQ 171 I P +S + L +++ L S + + DD +I + YN L Sbjct: 118 ISPFFKSQRENLISESTHKFSNLKSQGLRSSTIGSGKMWYRSDDYFIAFTNYNQIKKELY 177 Query: 172 GIFIVDSRDTQTHKIYYA------QSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKS 225 + + + A + G I + + I L+ + ++ K Sbjct: 178 NVTLYKLSADSYLEEIQAMQKVYWEKG-IWIGKNVIKLDGLNLKSFPKAEEN------KE 230 Query: 226 YTLQTESANSSTIVLKANDQNLSFL----LNPNPNNPNYRPELLETYRSEFHKRLTQWLF 281 + L+ + +++ L L + + Y F+ + + Sbjct: 231 NIINLYETPEE---LRQIEADITILNIVKLWKYIDQLKTSGININEYMVLFYDKFANSII 287 Query: 282 PVIFGLISIVAA--DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL 339 +IF +++ V+ R K I +F + + V+ + + + P Sbjct: 288 CIIFAILASVSVFNPNRRSSSFGKNIAAVFFFTILYWLVYSYLIELGNNSKVPPIAATFT 347 Query: 340 YLFLFCISSIFLLMIKKKYTK 360 F I I + +K K Sbjct: 348 VPIAFTIILIVIFSRNRKLAK 368 >gi|221211523|ref|ZP_03584502.1| putative membrane protein [Burkholderia multivorans CGD1] gi|221168884|gb|EEE01352.1| putative membrane protein [Burkholderia multivorans CGD1] Length = 326 Score = 81.5 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 41/318 (12%), Positives = 101/318 (31%), Gaps = 27/318 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRLYEKYFARQIYVTFIFILFAFSGLFFFFDLISELNSVGHGNYKFGYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + + L I ++ Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLLKIGVPLVIVTYLIGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF-------FRLDDDLY--IKISKYNPNNTLQ 171 + P +++ +A A S + ++ + + + + P++T+ Sbjct: 121 VGPYADQLSERVRLQALGASVSSNFQSGVWVKDTLAARENGEQVTRFVNVGSLAPDSTIS 180 Query: 172 GIFIVDSRDT-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-------------D 217 + I + Q + AQ+G + +L +PI Sbjct: 181 NVRIYEFDAKFQLKNVRIAQTGRYEP-PGHWLLKGVTETELTPIQPIAGQAPDALNPVYR 239 Query: 218 ISIMKFKSYTL--QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKR 275 + Y L S +++ ++ L + + + Y ++ Sbjct: 240 SQQVSLPEYRLRSDLTPQILSVLLVSPERMSIINLFR-YIQHLRENHQDTQRYDIALWRK 298 Query: 276 LTQWLFPVIFGLISIVAA 293 L + ++S+ A Sbjct: 299 LLYPFAVFVMLVLSLPFA 316 >gi|239809483|gb|ACS26209.1| unknown [uncultured bacterium] Length = 291 Score = 81.5 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 43/296 (14%), Positives = 103/296 (34%), Gaps = 9/296 (3%) Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 + P + L ++ ++EL I+ G S ++ V+ ++L I + + P Sbjct: 1 MLPMAALIGCLIGLGTLASSSELTIMRAAGVSLGRIVVAVMKPMLVLLIAGILIGEYVAP 60 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + AQ A + L+ ++ ++ ++ P L G+ D + Sbjct: 61 ATEDIAQARRSLAQGAGEAQSSKRGLW-HRQENEFVHVNAVQPGGMLVGVTRYRFDDERR 119 Query: 184 HK-IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 +A+ S D +L + ++ + + +Q T+V++ Sbjct: 120 LLSSSFARRASYQADH--WLLENISTTHFRGDHTEVVRTPQERWDVQLTPQLLGTVVMEP 177 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 +++ L + + Y F ++ Q V L++I +R Sbjct: 178 EALSITGL-WRYIHYLGEQGLNNGRYWLAFWTKVLQPAVTVALVLLAISFIFGP--LRSV 234 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF-LFCISSIFLLMIKKK 357 IF + + F VF ++ Q + P+L + I ++ + ++ Sbjct: 235 TLGQRIFTGVVVGF-VFRIIQDLLGPASQVFGFSPLLAVVLPAGICALIGAWLLRR 289 >gi|148255227|ref|YP_001239812.1| putative permease [Bradyrhizobium sp. BTAi1] gi|146407400|gb|ABQ35906.1| putative permease [Bradyrhizobium sp. BTAi1] Length = 365 Score = 81.5 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 55/365 (15%), Positives = 125/365 (34%), Gaps = 26/365 (7%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS----STESLNILLKISGYLI 57 + Y S + I ++ ++ I +V ++ S ++ + S + + Sbjct: 6 NTLGRYFAGRFLVS---AVGVFASIFVLLVLVDYIEMVRKTSGLASASALMVAETSLFRV 62 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 P +L + PFC + +++R EL++ G S I P L AI+L + Sbjct: 63 PQLLEKMMPFCVLIGAMTCYLALSRRLELVVARAAGVSAWQFIAPALASAIVLGLMATTL 122 Query: 118 ENIIEPKCRSTIKQLSAKAQLALTFSYLEENL-F----FRLDDDLYIKISKYNPNN-TLQ 171 N + R K++ A+ A +++ F D + I ++ L Sbjct: 123 YNPMSANLRELSKRMEAELFGAAPGGGVQDASGFWLNQINPDGSVIINAARSEQQGVRLT 182 Query: 172 GIFIV-DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT 230 G+ + + A+ +++ + V R S + + F L T Sbjct: 183 GLTLFRFDTEKHFKDRIEAREATLEDGQWVFK----SVRRFSLDAPPVDEPTF---ILPT 235 Query: 231 ESANSSTIVLKANDQNLSFLLNPN-PNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 + + + +SF P+ + YR ++HK + Q ++ ++ Sbjct: 236 SLTPAQVRNSFSTPETVSFWQLPSYIRSSESSGFATAGYRLQYHKLIAQPF--LLAAMVM 293 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF-LFCISS 348 + A+ R + + F ++ S + + + PI+ + + Sbjct: 294 LAASVSLRFFRMGGVQKMVLSGVGAGFLLYV-LSKVTEDLSKAALMDPIVAAWLPVFVGG 352 Query: 349 IFLLM 353 + M Sbjct: 353 LTGFM 357 >gi|54113817|gb|AAV29542.1| NT02FT0415 [synthetic construct] Length = 353 Score = 81.5 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 36/204 (17%), Positives = 87/204 (42%), Gaps = 9/204 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + YI R + SFL+ + + ++ L +++ +++ + +++ + +P + Sbjct: 3 LNRIDRYIFRTVFSSFLIVSIIFCILFFIFTYLAQVSNNTANVSNFELIIN-TLIQLPGI 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P C + L+ + N+E++++ + G S + K V+ + ++ S+ + Sbjct: 62 LYTLLPACAMVGALMGLSLLANNSEIIVLRSFGRSTAQIAKGVILVGLIGSVTTMVFGGY 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + + +Y +L+F+ D + N GI +D Sbjct: 122 IAP--------ILQRQVDTNMVTYNTHDLWFKTPDGFMNIANIEPTNGKAYGIRKFMVQD 173 Query: 181 TQTHKIYYAQSGSIDLDRQAIILN 204 + +I YA+S + D A + N Sbjct: 174 NKVREIRYAESATYINDASANVFN 197 >gi|30248806|ref|NP_840876.1| hypothetical protein NE0802 [Nitrosomonas europaea ATCC 19718] gi|30180401|emb|CAD84713.1| putative membrane protein [Nitrosomonas europaea ATCC 19718] Length = 355 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 57/361 (15%), Positives = 123/361 (34%), Gaps = 14/361 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YI + +++ ++ + +L +++ V T + + L+P Sbjct: 1 MKICHRYIAWQVLTGMVIATAILLPLFSFFDLLDQLDDVGKGTYTTWDAFLYTVMLMPRR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + PF + T L ++ N EL+ + G S + + + + LL E Sbjct: 61 FIQIAPFIALLGTVGALGALAVNLELVAMRVAGLSPLMIGLAPVGIGGLLIASTIALEYF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI-FIVDSR 179 + P+ + L A A ++ R + ++ ++I + I I Sbjct: 121 VAPQFQQQATILRAVALEQGAELGKGLGIWTRNERNI-LRIGEMLHKGRATDIEVIHFDG 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ---TESANSS 236 + +A I D L+D + SP I K++ LQ + Sbjct: 180 EGSMTAHVHAWYADI-FDESLWKLHDVTIRTFSPD----RITSRKAHILQWHSFLGPDDI 234 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + K+ + L + + + Y +++ + + L++I Sbjct: 235 ATLTKSPESLTPIELVKHAEFLRATGQKADAYVMALWRKVGGAIMTIAMILVAIPFIFG- 293 Query: 297 ALVRQRKKIHPIFISL-SISFGVFWGFSYIIHKIEQ-NPYYIPILYLFLFCISSIFLLMI 354 VR+ I +L IS +F I + Q NP + ++ + + L+ Sbjct: 294 -SVREGLGGKLILAALMGISIYLFDQIIANIGLVFQLNPIVVSVVPGMVLIAVAAHWLLR 352 Query: 355 K 355 + Sbjct: 353 R 353 >gi|297620917|ref|YP_003709054.1| putative permease, YjgP/YjgQ family [Waddlia chondrophila WSU 86-1044] gi|297376218|gb|ADI38048.1| putative permease, YjgP/YjgQ family [Waddlia chondrophila WSU 86-1044] Length = 359 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 49/352 (13%), Positives = 113/352 (32%), Gaps = 54/352 (15%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +E Y ++ ++F + +I + +S+ ++ + + Sbjct: 4 KIWERYFIKETLKTFFFISFCFYGLYVLIDYASHSG--ARHHQSMMEWSELIKFYANEWI 61 Query: 62 P---MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 ++ PF + T L +N + EL+ + +G S +++P +FL +L ++ ++ + Sbjct: 62 LRADVLVPFALMIATIRTLCDLNIHNELVALQASGISLKKILRPFIFLGLLFTLLIYANT 121 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 + P + + L + + + + + + D Sbjct: 122 EFLLPNAMAASRHLRNQ------------KEIQKNNKNKKFFVQHVG---------LKDG 160 Query: 179 RDTQTHKIYYAQSGSIDL------------------DRQAIILNDGEVHRKSPISKDISI 220 +A+ D ++ + G R P + I Sbjct: 161 STLLYQHYNFAERSFFDAYWVKSFDEIWRFQHLSPYEQPPKGIGVGHFQRM-PDNTLHKI 219 Query: 221 MKFKSYTLQTESANSS---TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLT 277 F+S + N + + + +LS L P++ E + + F + Sbjct: 220 ESFESRSFPEMKFNQKILLDTLTPSRELSLSTLWKRLPHSKEIESEKEAEFAASFFHKSA 279 Query: 278 QWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI 329 F +I+ VR + HPIF S+S G I++ Sbjct: 280 LPWLCF-FAVIA----PAPFCVRYGRS-HPIFFIYSLSLFFLVGSYLILNAA 325 >gi|296116657|ref|ZP_06835267.1| permease YjgP/YjgQ family protein [Gluconacetobacter hansenii ATCC 23769] gi|295976869|gb|EFG83637.1| permease YjgP/YjgQ family protein [Gluconacetobacter hansenii ATCC 23769] Length = 371 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 56/365 (15%), Positives = 117/365 (32%), Gaps = 26/365 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTVL 61 + LYI R + L F+ + + + + VSS +++ +I+ IP + Sbjct: 6 TLSLYIARQFTYAVLAVIAFLTGLITLFDFIDLLRRVSSRPNVPASLVSEIAVLHIPFAM 65 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF + + R++EL++ G S + + A+L+ + + Sbjct: 66 LEILPFGVLLGGIICFWRLARSSELVVARAAGISAWQFLAGPVGCALLIGALSTTVISPL 125 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLE----ENLFFRLDDDLY------IKISK-YNPNNTL 170 + L + T + + D L I + +N + Sbjct: 126 SSAMYRRAEILDQQYLRESTVKTINMSGGALWMRQSDSGLVDHGVAIIHARRVRLRDNVM 185 Query: 171 Q----GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSY 226 + IF +D +D + A G + R + E R ++ M + Sbjct: 186 RISGISIFRLDGQDHMLAR-IEAGHGYLGNGRWVL-----EGARLLHPDENPVDMGHMTL 239 Query: 227 TLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFG 286 A + N ++ L N +R F LT + Sbjct: 240 RADLTLAGVQDSLASPNTLSVWALPG-FIKLLNRSGFSSIRHRLRFQSLLTLPVLCGTMA 298 Query: 287 LISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCI 346 L++ A R+ + I + + F +F S I + ++ P+L + Sbjct: 299 LVA--AGFSMRPARRGGVVRMISLGVGAGFALFAI-SKIAAQFGESGALPPVLAAWAPTG 355 Query: 347 SSIFL 351 + + L Sbjct: 356 AGLCL 360 >gi|325278208|ref|ZP_08143701.1| permease YjgP/YjgQ family protein [Pseudomonas sp. TJI-51] gi|324096648|gb|EGB95001.1| permease YjgP/YjgQ family protein [Pseudomonas sp. TJI-51] Length = 241 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 31/202 (15%), Positives = 74/202 (36%), Gaps = 3/202 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + + L I+ +A + + + + S T ++ P Sbjct: 1 MAKLDRYIGQSVLLAILAVLGIILGLASLFAFIDEMGDL-SDTYTVMQAGYYVLLTAPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L S+ ++EL I+ G S ++ V+ ++L + + Sbjct: 60 LYEMLPMAALIGCLIGLGSLASSSELTIMRAAGVSIGRIVWAVMKPMLVLMLVGLLIGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF-IVDSR 179 + P + + + AQ + ++ R ++ ++ I+ PN L G+ Sbjct: 120 VAPVTENKAQADRSLAQGGGEAQSSKRGMWHRQGEE-FVHINAVQPNGLLLGVTRYRFDS 178 Query: 180 DTQTHKIYYAQSGSIDLDRQAI 201 + + +A+ D + Sbjct: 179 ERKIQTSSFARRAQYTDDHWLL 200 >gi|167645642|ref|YP_001683305.1| permease YjgP/YjgQ family protein [Caulobacter sp. K31] gi|167348072|gb|ABZ70807.1| permease YjgP/YjgQ family protein [Caulobacter sp. K31] Length = 354 Score = 81.2 bits (199), Expect = 3e-13, Method: Composition-based stats. Identities = 61/364 (16%), Positives = 115/364 (31%), Gaps = 26/364 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 +LY+LR +G L + L + I ++ +L+ + +L + P ++ Sbjct: 2 KIQLYVLRTVGTRVLGAGLILFSILQILDLLEVTTDIIDRGLGTAGVLYYAALRSPRLVE 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 V P + + R ++ + TG S ++ L + L+ F II Sbjct: 62 QVAPLATLAGGLFAFSQLARENAIIAMRATGISAYRIVGMALPVVFLVMALDFSCAQIIA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P+ + A F R DDL I TL + I RD Sbjct: 122 PRTDPVLADWWQATTPAAERKVPGPRSF-RAGDDLVIAAGASADGGTLNAVKIY-RRDKI 179 Query: 183 THKI--YYAQSGSIDLD------RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 I A S S + + I+ GE P ++ +Q A+ Sbjct: 180 GRLIERIEAPSASYNSGGGWTLAKPVIVRFKGEQVNVVPAAQLSWPSPLHRQDVQALFAD 239 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 S + L Y + F ++ L+S A Sbjct: 240 SPVPTAATARRALL---------SGGGDRPAAFYETRFLSAFAGPFAALVMLLLSAPVAL 290 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF----LFCISSIF 350 Q + ++ + F V G ++ + + PIL ++ +F +++ Sbjct: 291 ANFRSGQGAGLLAGGLAAGLLFLVVNG---MLSALGEGGSLSPILAVWGGPVIFAALAVY 347 Query: 351 LLMI 354 L++ Sbjct: 348 ALVV 351 >gi|16125935|ref|NP_420499.1| hypothetical protein CC_1690 [Caulobacter crescentus CB15] gi|221234698|ref|YP_002517134.1| hypothetical protein CCNA_01761 [Caulobacter crescentus NA1000] gi|13423101|gb|AAK23667.1| conserved hypothetical protein [Caulobacter crescentus CB15] gi|220963870|gb|ACL95226.1| hypothetical membrane spanning protein [Caulobacter crescentus NA1000] Length = 368 Score = 81.2 bits (199), Expect = 3e-13, Method: Composition-based stats. Identities = 58/353 (16%), Positives = 119/353 (33%), Gaps = 20/353 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSST-ESLNILLKISGYLIPT 59 M E Y+L+ + + + + + +I + V + S LL ++ P Sbjct: 5 MGMLERYVLKRTMGALVGALAVLSAMVMLIAFVDIARNVGTRADASFLRLLYLTILQAPA 64 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + ++ PF F T +NR +EL+ + G S I P + ++ + N Sbjct: 65 TILVLAPFIFLFGTMWAFVELNRRSELIAMRAAGISAWRFIMPAAASSFVIGLLTITLLN 124 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLY-IKISKYNPNNTLQGIFIVDS 178 + + + + + + R DD I I + + Sbjct: 125 PLTTAMTAKFETERDRTMNGYLKEA-PKGTWLRQGDDKTQIVIRARARELVDGSVRL--- 180 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 R G +D R+ + R P +S ++ + ++S +I Sbjct: 181 RGVSLFVYTLNAKGVMDFTRR----IEANEARLEPGFWRLSGVREATPGAGAIRSDSLSI 236 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSE-------FHKRLTQWLF-PVIFGLIS- 289 +D+ S N +R ++ F RL Q L P++F +S Sbjct: 237 PSNLDDRTASERFNTPQAVALWRLPATIQRTADAGFSAVPFKLRLQQDLATPLLFAAMSV 296 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 + AA L+R +++ FG F+ F+ + + + P + + Sbjct: 297 LAAAFSLRLMRLGGLAMLAGSGVALGFGFFF-FNELCSTLGRADVLAPFVAAW 348 >gi|49474100|ref|YP_032142.1| hypothetical protein BQ04620 [Bartonella quintana str. Toulouse] gi|49239604|emb|CAF25961.1| Hypothetical transmembrane protein [Bartonella quintana str. Toulouse] Length = 364 Score = 80.8 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 55/364 (15%), Positives = 115/364 (31%), Gaps = 30/364 (8%) Query: 3 SFELYILRCIGRS---FLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPT 59 + Y + F S + F+ + R++ + S + IS IP Sbjct: 5 TLGRYFFVRYLKMTCYFFGSIFVLAFLIDFTENSSRLSYLPSY--TAKDAFLISVLRIPF 62 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ + PF +L S+NR EL++ + G S + P F A L +F + N Sbjct: 63 IMQQLIPFIALFSAMAMLISLNRKCELVVTRSIGVSAWQFLMPACFGAFLFGLFSILLVN 122 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLF------FRLDDDLYIKISKYNPNN--TLQ 171 + S ++++ + + + D I + Sbjct: 123 PLAAWGFSQAEKMTTEWRSNNVLTSFHNTRIIPWLTQRTNSDRTTIGAKSITDQGLSLID 182 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 F+ + + + ++ +L +G +++ + KF + ++T Sbjct: 183 ATFVQYNDNATVKNWINTRKATL--TNGVWLLTNGTIYKIGHPPE-----KFTEFQIKTN 235 Query: 232 SANSSTIVLKANDQNLSFLLNPNP----NNPNYRPELLETYRSEFHKRLTQWLFPVIFGL 287 AN + F P + Y + Y + + L Sbjct: 236 LKPEFLTERLANPATIPFYQLPKKIMIARSFGYSANNFDMYLQSL---IALPALLIAMTL 292 Query: 288 ISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCIS 347 I+ A R + IF + F ++ S ++ Y PI+ + I Sbjct: 293 IA--ATVSLNFTRFGQSGTLIFGGVIAGFTLYVI-SVLVQAFGNAGYMPPIIAAWTPVII 349 Query: 348 SIFL 351 ++FL Sbjct: 350 ALFL 353 >gi|21244279|ref|NP_643861.1| hypothetical protein XAC3554 [Xanthomonas axonopodis pv. citri str. 306] gi|21109927|gb|AAM38397.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 368 Score = 80.8 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 51/369 (13%), Positives = 113/369 (30%), Gaps = 27/369 (7%) Query: 5 ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 + Y+ R + + L++ ++ + V + + + + + Y +P + Sbjct: 9 DWYVGRVVLFTVLLTWAVLLGLDLVNALASEAKNIGQGSYTFGHAVAYVAYTVPRRAYTL 68 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P + L + +EL + G SR + V+ LL+ + IS I P Sbjct: 69 FPTAAVIGALMGLGQLAATSELTALRALGVSRKRMSASVVAAMALLTASMVISGETIGPW 128 Query: 125 CRSTIKQLSAKAQLA-------LTFSYLEEN-LFFRLDDDLYIKISKYNPNNT---LQGI 173 ++ L A A+ + E F + + T L + Sbjct: 129 AQNQADTLKASARYNSDMASSRYAGLWAREGDTFLNALSG---EEKLLDGGGTALDLHDV 185 Query: 174 FIV--DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 + DS Y A R + +V R + + + F Q++ Sbjct: 186 RLYHLDSSGRMQQLTY-ASVAEHRDGRWTLR----QVRRDTFQERSVQRETFPELPWQSQ 240 Query: 232 SANSSTIVLKANDQNLSFL-LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 ++ A +NLS L + Y ++ R W +P+ + + Sbjct: 241 LNPAALAAGLAKPRNLSAHDLEQSIEYRRRNGLDARDYEDQYWSR---WFYPLNVLALCM 297 Query: 291 VAAD-KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-NPYYIPILYLFLFCISS 348 A +R +F+ + + G + + Y L + Sbjct: 298 AAIPFSFGSLRSGGLGKRLFLGILFALGFWLLQLFFGRMAGALKLDYRIAYALPPMVMLG 357 Query: 349 IFLLMIKKK 357 + + +++ Sbjct: 358 VSAWLFRRR 366 >gi|203288235|ref|YP_002223250.1| hypothetical protein BRE_818 [Borrelia recurrentis A1] gi|201085455|gb|ACH95029.1| conserved hypothetical integral membrane protein [Borrelia recurrentis A1] Length = 429 Score = 80.8 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 39/204 (19%), Positives = 84/204 (41%), Gaps = 3/204 (1%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 +E YI+ + F ++ LF +F+ ++ QIL + ++ + S Y +P V+ + Sbjct: 8 YESYIITEFCKYFFITFLFFLFVFFINQILFFMRILLQNYVSFFKAFIFVIYSLPMVVAL 67 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 PF + + N E+L + G S L+ P L L +++++ FI + + P Sbjct: 68 SPPFAALLSVILTIYRFKLNNEILAFRSIGISISNLLTPFLKLGVIIALVSFILNDFLLP 127 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 ++ + + L+ + DL + + F ++R Sbjct: 128 LGSIGRLKIFNDIKEEIPHLILKPYS-SKQYGDLIFVSGEKSETGYKNVTFFDNTRLKGY 186 Query: 184 HKIYYAQSGSIDLDRQAI--ILND 205 +I+ A+ +I + + ILN+ Sbjct: 187 DRIFMAKELNIQKENHQVYFILNN 210 >gi|325292486|ref|YP_004278350.1| permease protein [Agrobacterium sp. H13-3] gi|325060339|gb|ADY64030.1| putative permease protein [Agrobacterium sp. H13-3] Length = 362 Score = 80.8 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 55/358 (15%), Positives = 114/358 (31%), Gaps = 18/358 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTV 60 + Y L+ + + L + I ++ + +SS S+ L ++ +P + Sbjct: 4 STLARYFLKRYLITAIWFLLGVSAIIYLADFSETARRMSSVPGYSVPGALGLTALRLPLI 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L PF L S+NR EL++ G S I P + A+ L I + N Sbjct: 64 LQQTIPFIALFVGMTTLISLNRRYELVVTRAAGVSAWQFILPFVLGAVFLGILSVLVLNP 123 Query: 121 IEPKCRSTIKQLSA----KAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTL--QGIF 174 I ++ + A + + D I + N T+ + Sbjct: 124 IAAWGQNRSLSMEAGWRNEGSGGRQQDIIPWMRQSSGGQDTIIGAKSFEDNGTMLLDVVL 183 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 I +D A+S + L +G ++ +S + T Sbjct: 184 IHLDKDGNIVSRQDAKSAKL---EDGYWLLNGVAETRAGHVPVRQ----ESTRISTNLRR 236 Query: 235 SSTIVLKANDQNLSFL-LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + ++F L+ + +++H L+ L V LI+ A Sbjct: 237 EFVQERMTQTETVAFFDLSHKIEVAKSFGLSSKALETQYHFLLSTPLLLVAMTLIA--AT 294 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 R + I + F ++ + ++ P + +++ I ++ L Sbjct: 295 VSLKFSRFAQSRSVILGGIVSGFVLYVV-TVLVRAFGSGGVVPPTVAVWVPVIVALAL 351 >gi|121601841|ref|YP_988822.1| YjgP/YjgQ permease [Bartonella bacilliformis KC583] gi|120614018|gb|ABM44619.1| putative permease, YjgP/YjgQ family [Bartonella bacilliformis KC583] Length = 363 Score = 80.4 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 65/361 (18%), Positives = 119/361 (32%), Gaps = 25/361 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 Y R L +A++I ++ + ++S + L IS IP ++ Sbjct: 5 ILGRYFFIQYLRITCYFLLGAFILAFLIDFIENSSRLTSLPHYTTKGALLISFLRIPLIM 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF +L S+NR EL+I + G S + P F A L + N Sbjct: 65 QQLFPFIALFSAITMLISLNRKFELVIARSIGVSAWQFLMPACFGAFFLGLVAIFLFNPF 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENL---FFRLDD--DLYIKISKYNPNN--TLQGIF 174 S +++ A+ + L + F + D I + IF Sbjct: 125 AAWGYSQAEKIIAEWHSNNVQTSLNNHRIPWFTQHTDLGTTTIGAKSITDEGLSLINAIF 184 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + + D +AQ ++ A L G +++ I + KF + ++T Sbjct: 185 VQYNEDATIKNWIHAQKATL--TNSAWFLTHGTIYKTGHIPE-----KFAEFWIETNLKP 237 Query: 235 SSTIVLKANDQNLSFLLNPNP----NNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 A+ SF P + Y + Y + V LI+ Sbjct: 238 EFLTEYLADPATTSFYKLPKKIAVARSFGYSANKFDMYLQSL---IALPALLVAMTLIA- 293 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 A R + I + F ++ S ++ Y PI+ ++ I ++F Sbjct: 294 -ATVSLKFTRLEQSGKLILSGVIAGFVLYVI-SVLVRAFGNAGYIPPIIAAWVPVIIALF 351 Query: 351 L 351 L Sbjct: 352 L 352 >gi|307728895|ref|YP_003906119.1| permease YjgP/YjgQ family protein [Burkholderia sp. CCGE1003] gi|307583430|gb|ADN56828.1| permease YjgP/YjgQ family protein [Burkholderia sp. CCGE1003] Length = 382 Score = 80.4 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 50/382 (13%), Positives = 128/382 (33%), Gaps = 26/382 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRIYERYFARQIYLTFIFILFAFSGLFFFFDLINELNSVGHGNYKFQYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + I L ++ + Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEYTIFRVSGLATNQALRSLLKIGIPLVFLTYLIGEV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRL-----DDD----LYIKISKYNPNNTLQ 171 I P +++ +A + S + ++ + D ++ + + P+ T+ Sbjct: 121 IGPYTDQLSERVRLEAMGSSVSSNFKSGVWVKDTLTARADGEQVTRFVNVGELKPDATIS 180 Query: 172 GIFIVD-SRDTQTHKIYYAQSGSID-LDRQAII-LNDGEVHRKSPISKDI---------- 218 + I + + + AQSG + + D ++ P + Sbjct: 181 NVRIYEFDSKFRLSNVRIAQSGVYQPPGHWRLTGVTDTQLIDVPPPAGTPADALNPVYRA 240 Query: 219 SIMKFKSYTLQTE-SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLT 277 + Y+L++E + +++L + D+ F L + + + Y +++ Sbjct: 241 KQVVLPEYSLRSELTPQILSVLLVSPDRMSMFNLFRYIQHLTENHQDTQRYEIALWRKVL 300 Query: 278 QWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP 337 + ++S+ A R +F + + + H N + P Sbjct: 301 YPFAVFVMLVLSLPFA--YLHTRAGVVGMKVFGGIMLGMSFQLFNTLFSHIGTLNTWPAP 358 Query: 338 ILYLFLFCISSIFLLMIKKKYT 359 + + + L ++ K+ Sbjct: 359 LTAATP-GLVYLVLGLVGLKWV 379 >gi|294625210|ref|ZP_06703851.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294664572|ref|ZP_06729914.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292600484|gb|EFF44580.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292605656|gb|EFF48965.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 368 Score = 80.4 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 51/369 (13%), Positives = 112/369 (30%), Gaps = 27/369 (7%) Query: 5 ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 + Y+ R + + L++ ++ + V + + + + Y +P + Sbjct: 9 DWYVGRVVLFTVLLTWAVLLGLDLVNAFASEAKNIGQGSYTFGHAVAYVAYTVPRRAYTL 68 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P + L + +EL + G SR + V+ LL+ + IS I P Sbjct: 69 FPTAAVIGALMGLGQLAATSELTALRALGVSRKRMSASVVAAMALLTASMVISGETIGPW 128 Query: 125 CRSTIKQLSAKAQLA-------LTFSYLEEN-LFFRLDDDLYIKISKYNPNNT---LQGI 173 ++ L A A+ + E F + + T L + Sbjct: 129 AQNQADTLKASARYNSNMASSRYAGLWAREGDTFLNALSG---EEKLLDGGGTALDLHDV 185 Query: 174 FIV--DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 + DS Y A R + +V R + + + F Q++ Sbjct: 186 RLYHLDSSGRMQQLTY-ASVAEHRDGRWTLR----QVRRDTFQERSVQRETFPELPWQSQ 240 Query: 232 SANSSTIVLKANDQNLSFL-LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 ++ A +NLS L + Y ++ R W +P+ + + Sbjct: 241 LNPAALAAGLAKPRNLSAHDLEQSIEYRRRNGLDARDYEDQYWSR---WFYPLNVLALCM 297 Query: 291 VAAD-KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-NPYYIPILYLFLFCISS 348 A +R +F+ + + G + + Y L + Sbjct: 298 AAIPFSFGSLRSGGLGKRLFLGILFALGFWLLQLFFGRMAGALKLDYRIAYALPPMVMLG 357 Query: 349 IFLLMIKKK 357 + + +++ Sbjct: 358 VSAWLFRRR 366 >gi|203284703|ref|YP_002222443.1| hypothetical protein BDU_815 [Borrelia duttonii Ly] gi|201084146|gb|ACH93737.1| conserved hypothetical integral membrane protein [Borrelia duttonii Ly] Length = 429 Score = 80.4 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 38/204 (18%), Positives = 83/204 (40%), Gaps = 3/204 (1%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 +E YI+ + F ++ LF +F+ ++ QIL + ++ + Y +P V+ + Sbjct: 8 YESYIITEFCKYFFITFLFFLFVFFINQILFFMRILLQNYVPFFKAFIFVIYSLPMVVAL 67 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 PF + + N E+L + G S L+ P L L +++++ FI + + P Sbjct: 68 SPPFAALLSVILTIYRFKLNNEILAFRSIGISISNLLTPFLKLGVIIALVSFILNDFLLP 127 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 ++ + + L+ + DL + + F ++R Sbjct: 128 LGSIGRLKIFNDIKEEIPHLILKPYS-SKQYGDLIFVSGEKSETGYKNVTFFDNTRLKGY 186 Query: 184 HKIYYAQSGSIDLDRQAI--ILND 205 +I+ A+ +I + + ILN+ Sbjct: 187 DRIFMAKELNIQKENHQVYFILNN 210 >gi|146340303|ref|YP_001205351.1| putative permease [Bradyrhizobium sp. ORS278] gi|146193109|emb|CAL77120.1| putative permease [Bradyrhizobium sp. ORS278] Length = 365 Score = 80.4 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 57/368 (15%), Positives = 129/368 (35%), Gaps = 29/368 (7%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS----STESLNILLKISGYLI 57 + Y S + I ++ ++ I +V ++ S ++ + S + + Sbjct: 6 NTLGRYFAGRFLVS---AVGVFASIFLLLVLVDYIEMVRRTSGLASASALMVAETSLFRV 62 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 P +L + PFC + +++R EL++ G S I P L AI+L + Sbjct: 63 PQLLEKMMPFCVLIGAMTCYLALSRRLELVVARAAGVSAWQFIAPALASAIVLGLMATTL 122 Query: 118 ENIIEPKCRSTIKQLSAKAQLALTFSYLEENL-F----FRLDDDLYIKISKYNPNN-TLQ 171 N + R K++ A+ + +++ F D + I ++ L Sbjct: 123 YNPMSANLRELSKRMEAELFGSAPGGGVQDASGFWLNQLNPDGSVIINAARSEQQGVRLT 182 Query: 172 G--IFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ 229 G +F D+++ + A+ S++ + V R S + + F L Sbjct: 183 GLTLFRFDTKNRFKDR-IEAREASLEDGQWVFK----SVRRFSLDAPPVDEPTF---ILP 234 Query: 230 TESANSSTIVLKANDQNLSFLLNPN-PNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 T + + + +SF P+ + YR ++HK + Q ++ ++ Sbjct: 235 TTLTPAQVRNSFSTPETVSFWQLPSYIRSSESSGFATAGYRLQYHKLIAQPF--LLAAMV 292 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSY---IIHKIEQNPYYIPILYLFLFC 345 + A+ R + + F ++ + +P L +F+ Sbjct: 293 MLAASVSLRFFRMGGVQKMVLSGVGAGFLLYVLSKVTEDLSKAALMDPIAAAWLPVFVGG 352 Query: 346 ISSIFLLM 353 ++ L+ Sbjct: 353 LTGFMALL 360 >gi|21230126|ref|NP_636043.1| hypothetical protein XCC0651 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769883|ref|YP_244645.1| hypothetical protein XC_3583 [Xanthomonas campestris pv. campestris str. 8004] gi|21111656|gb|AAM39967.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575215|gb|AAY50625.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] Length = 368 Score = 80.4 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 52/367 (14%), Positives = 115/367 (31%), Gaps = 23/367 (6%) Query: 5 ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 + Y+ R + + L++ ++ + V + + S + Y +P + Sbjct: 9 DWYVGRAVLFTVLLTWAVLLGLDVVNAFASEAKSIGQGSYSFGHAIAFVAYTVPRRAYTL 68 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P + L + +EL + G SR + V+ LL+ + IS + P Sbjct: 69 FPTAAVIGALMGLGQLAATSELTALRALGVSRKRMSASVVVAMALLTATMVISGETVGPW 128 Query: 125 CRSTIKQLSAKAQLALTFSYLE-ENLFFRLDDDLYIKISKYNPNNTLQG----IFIVDSR 179 +S L A+ + L+ R D + L + + D R Sbjct: 129 AQSQADTLKTSARYQSDMTSARYSGLWAREGD--TFLNALSGEEQLLDNGGTALTLHDVR 186 Query: 180 ------DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 + Q ++ YA R + +V R + ++ + F Q++ Sbjct: 187 LYHLDANGQMQQLTYAAVAEHREGRWTLR----QVRRDTFQARSVQRETFPELPWQSQLN 242 Query: 234 NSSTIVLKANDQNLSFL-LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + A +NLS L + Y ++ R W +P+ + + A Sbjct: 243 PKALAAGLAKPRNLSVHDLGQSIEYRRRNGLDASDYEDQYWSR---WFYPLNVLALCLAA 299 Query: 293 AD-KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-NPYYIPILYLFLFCISSIF 350 +R +F+ + + G + + Y L + + Sbjct: 300 IPFSFGSLRSGGLGKRLFLGILFALGFWLLQLFFGRMAGALKLDYRIAYALPPMVMLGVS 359 Query: 351 LLMIKKK 357 + +++ Sbjct: 360 AWLFRRR 366 >gi|319956628|ref|YP_004167891.1| permease yjgp/yjgq family protein [Nitratifractor salsuginis DSM 16511] gi|319419032|gb|ADV46142.1| permease YjgP/YjgQ family protein [Nitratifractor salsuginis DSM 16511] Length = 340 Score = 80.4 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 49/363 (13%), Positives = 138/363 (38%), Gaps = 28/363 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YIL +++L+ L + + +I ++Q L S L+++ GY++P + Sbjct: 1 MGKTRRYILWSFAKAYLLVFLPFLLVVSLIFVIQLSILSSRVNLEFRELVQLFGYMLPEI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 P N T + E + + + G + +++ ++ +L + L + + Sbjct: 61 FFYTVPLSLIAALANTFTRFSEENEFIALFSLGHTPGKVLRFMIPTLLLFTALLLVLSVM 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ + + + T + + N + ++ + + N+T + + + + Sbjct: 121 LYPQMKQKLNHFKRQKIAEATLN-ISPNKLSQNFGSYHVFVESKDANDTYRNMVLFNQGT 179 Query: 181 TQTHKIYYAQSGSIDLDRQ--AIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 ++++ A+ G + D + + L +G P K + + ++ + N Sbjct: 180 KGAYQLFIAREGRVANDGKRFTLTLRNGTGETSDP--KKVENLHYRELDIYQYPRNVYQS 237 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPV-IFGLISIVAADKRA 297 ++ + + L ++ R +LL + L P+ FG+I+ + Sbjct: 238 IVTSREYWKKAL-----HDKGRRGKLLYL--------IFVSLTPILAFGIIAALTFYNPR 284 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 R +L++ Y+ I Q +P+ + + ++ + +++++ Sbjct: 285 YQRSLSIAVIFITALAV---------YLPAAILQKSGSVPLFIALVIFLLALGIFLLRRR 335 Query: 358 YTK 360 + Sbjct: 336 VLR 338 >gi|124267133|ref|YP_001021137.1| hypothetical protein Mpe_A1944 [Methylibium petroleiphilum PM1] gi|124259908|gb|ABM94902.1| conserved hypothetical protein [Methylibium petroleiphilum PM1] Length = 373 Score = 80.4 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 34/343 (9%), Positives = 106/343 (30%), Gaps = 19/343 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M++ + + + + + + + I ++ ++ + ++ +P Sbjct: 1 MRTVRRLLYADVLGAVTFVAVSFLSLFFFIDFVEELDDIGRGAYRVHHAALYCLLELPGR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + T + + +++E I+ G + + + + ++ F+ + Sbjct: 61 LYELLPIAVLIGTIYAMARLAQSSEFTILRTGGLGPGRALSLLAKIGLAFAVLTFVVGDY 120 Query: 121 IEPKCRSTIKQLSAKAQLALT-----FSYLE------ENLFFRLDDDLYIKISKYNPNNT 169 + P + + L + + + + ++L+ + I I P+ Sbjct: 121 VGPYFDAKAQTLRSTLRGSASGGGNNSAWLKDRRAAAPGELPAGERIDSINIGNVGPDGL 180 Query: 170 LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL- 228 L + I + + A ++ D A L + R S D + + L Sbjct: 181 LDDVRIYEFSEEGQLLARVAAEHAVVEDG-AWRLKKVRLTRWHAASGDGLPVDERRDELR 239 Query: 229 ---QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIF 285 + + V + L ++ + + + +F K+ L ++ Sbjct: 240 WPTRLTPSVVGAAVSPLKSMSTVDLYR-YMSHLSQNEQAAQRQEIQFWKKALYPLACLV- 297 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHK 328 ++ + R +F + + + H Sbjct: 298 -MVGLALPFAYLHARAGGVSVKVFGGILLGISFVLLNNVSTHL 339 >gi|187479476|ref|YP_787501.1| permease [Bordetella avium 197N] gi|115424063|emb|CAJ50616.1| putative permease [Bordetella avium 197N] Length = 389 Score = 80.4 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 47/370 (12%), Positives = 119/370 (32%), Gaps = 23/370 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M++ Y+ R I RS + L ++ + ++ ++ V S+ LL + +PT Sbjct: 1 MRTARRYLAREIYRSCAVVLLALLGLFTFFALVDDLDNVGEK-FSMLALLYMQALALPTR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L + + EL+I+ +G S + L++ + + I + I + Sbjct: 60 LYDLLPIGLLIGAILALAGLAQRNELVILRVSGVSGMRLMRMLWVVTIPVMIGATLLSEF 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENL-FFRLDDD---LYIKISKYNPNNTLQGIFIV 176 + P + + L F D I I + ++ + + Sbjct: 120 VTPIAEIKSGEADLTFRGKAGGGRLNSGYWFKEPTRDGGTRIINIQTLLADGQVRDVTLY 179 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPIS--------------KDISIMK 222 + +++ ++L+D R +P + ++ + Sbjct: 180 EL-KPDLELESLSKAAKGVFTDGDLLLSDVVQTRIAPEAAQALANAKQPPKPPAEVETLA 238 Query: 223 FKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFP 282 VL + + L++ + ++ + ++ Sbjct: 239 SLRLDTTLSPERLLARVLTPERMSAATLID-YIDYLHHNQLQADRQVVALWRKFVYPFTL 297 Query: 283 VIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 ++ +I+I A R+ +FI + + F ++ + + + L Sbjct: 298 LV--MITIAAPIAFMQTRRGGVGAKVFIGILMGVAFFMVNQLSLNVGMLSRWPPWLTALG 355 Query: 343 LFCISSIFLL 352 + I L Sbjct: 356 PNAAAMIVAL 365 >gi|319408319|emb|CBI81972.1| conserved membrane hypothetical protein [Bartonella schoenbuchensis R1] Length = 363 Score = 80.4 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 53/361 (14%), Positives = 120/361 (33%), Gaps = 25/361 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + Y ++ L I +A +I + ++S + L IS +P ++ Sbjct: 5 TLGRYFFVRYIKTTCYFVLSIFILALLIDFTENSGRLASLPHYTAKGALLISALRVPFIM 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF +L S+N+ EL++ + G S + P A L +F + N + Sbjct: 65 QQLFPFIALFSAMTMLISLNKKFELVVARSIGVSAWQFLIPACLGAFLFGLFSILFINPL 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLF-----FRLDDDLYIKISKYNPNN--TLQGIF 174 S +++ A+ + + + +N I + F Sbjct: 125 AAWGSSQAEKMIAEWRSNNVQTSINKNRIPWLTQHTNLGTTTIGARSITQQGLSLIDATF 184 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + + + +A+ ++ D A +L +G +++ + + KF + ++T Sbjct: 185 VQYNDNATVKNWIHAKQATLTND--AWLLTNGTIYKTGYVPE-----KFTEFRIKTNLKP 237 Query: 235 SSTIVLKANDQNLSFLLNPNP----NNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 A+ + F P + Y + Y + V LI+ Sbjct: 238 EFLTEYLADPATIPFYKLPRKISAARSFGYSANKFDMYLQSL---IALPALLVAMTLIA- 293 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 A R + I + F ++ S ++ Y P++ + + ++F Sbjct: 294 -ATVSLKFTRFGQSKALILGGVIAGFMLYVI-SVLVQAFGNAGYIPPVIAAWTPVVIALF 351 Query: 351 L 351 Sbjct: 352 F 352 >gi|56708377|ref|YP_170273.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis SCHU S4] gi|89256770|ref|YP_514132.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica LVS] gi|110670847|ref|YP_667404.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis FSC198] gi|115315161|ref|YP_763884.1| hypothetical protein FTH_1435 [Francisella tularensis subsp. holarctica OSU18] gi|167010911|ref|ZP_02275842.1| hypothetical protein Ftulh_09398 [Francisella tularensis subsp. holarctica FSC200] gi|187931970|ref|YP_001891955.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. mediasiatica FSC147] gi|224457507|ref|ZP_03665980.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis MA00-2987] gi|254371000|ref|ZP_04987003.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis FSC033] gi|254875200|ref|ZP_05247910.1| permease yjgP/yjgQ family protein [Francisella tularensis subsp. tularensis MA00-2987] gi|56604869|emb|CAG45953.1| Permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis SCHU S4] gi|89144601|emb|CAJ79920.1| Permease YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica LVS] gi|110321180|emb|CAL09336.1| Permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis FSC198] gi|115130060|gb|ABI83247.1| conserved hypothetical protein [Francisella tularensis subsp. holarctica OSU18] gi|151569241|gb|EDN34895.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis FSC033] gi|187712879|gb|ACD31176.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. mediasiatica FSC147] gi|254841199|gb|EET19635.1| permease yjgP/yjgQ family protein [Francisella tularensis subsp. tularensis MA00-2987] gi|282159996|gb|ADA79387.1| hypothetical protein NE061598_09765 [Francisella tularensis subsp. tularensis NE061598] Length = 353 Score = 80.0 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 36/204 (17%), Positives = 87/204 (42%), Gaps = 9/204 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + YI R + SFL+ + + ++ L +++ +++ + +++ + +P + Sbjct: 3 LNRIDRYIFRTVFSSFLIVSIIFCILFFIFTYLAQVSNNTANVSNFELIIN-TLIQLPGI 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P C + L+ + N+E++++ + G S + K V+ + ++ S+ + Sbjct: 62 LYTLLPACAMVGALMGLSLLANNSEIIVLRSFGRSTAQIAKGVILVGLIGSVTTMVFGGY 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + + +Y +L+F+ D + N GI +D Sbjct: 122 IAP--------ILQRQVDTNMVTYNTHDLWFKTPDGFMNIANIEPTNGKAYGIRKFMVQD 173 Query: 181 TQTHKIYYAQSGSIDLDRQAIILN 204 + +I YA+S + D A + N Sbjct: 174 NKVREIRYAESATYINDASANVFN 197 >gi|197105169|ref|YP_002130546.1| hypothetical protein PHZ_c1706 [Phenylobacterium zucineum HLK1] gi|196478589|gb|ACG78117.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1] Length = 367 Score = 80.0 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 51/368 (13%), Positives = 116/368 (31%), Gaps = 25/368 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSST-ESLNILLKISGYLIPT 59 + E Y++ + + I + +IQ ++ + V + + + ++ P+ Sbjct: 4 LGRLERYVMGRMLAGVGAALAVISAVILLIQFVELSSQVGTRADVGASGIFALTLLRAPS 63 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ ++ PFCF +NR +EL+ + G S I P LA +L + N Sbjct: 64 LIQILLPFCFLFGGIGAFVGLNRKSELVAMRAAGVSAWRFILPSAALAAILGVLAVAVLN 123 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-----TLQG-- 172 + + A+ ++ + D+ I I + L+G Sbjct: 124 PFAAALNARFEAERARLMENYLGDRPQDVWIRQGDERTQIVIHAKDRETVAGAVVLKGVS 183 Query: 173 IFIVDSRD---TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ 229 +FI + + + A + + + + SI Sbjct: 184 VFIYEKTPRGAPEFRRRLEAAEARLMPGFWRL------RDVREAGVGESSIRSESLSIRS 237 Query: 230 TESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 T A ++ + + + L YR F + L + + + Sbjct: 238 TLDAEAAMERFASPEAIAFWRLPAAIRLTEQAGFSAAGYRLRFQQLLATPV--LFAAMTV 295 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN------PYYIPILYLFL 343 + AA LVR +++ F +F+ + + + + P L L Sbjct: 296 LAAAFSLRLVRLGGLAGLAGAGVALGFVMFFFNQFAGALAKADILPLFAAAWAPTLVALL 355 Query: 344 FCISSIFL 351 ++ + Sbjct: 356 AGVTLLCY 363 >gi|88802489|ref|ZP_01118016.1| hypothetical protein PI23P_07865 [Polaribacter irgensii 23-P] gi|88781347|gb|EAR12525.1| hypothetical protein PI23P_07865 [Polaribacter irgensii 23-P] Length = 351 Score = 80.0 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 51/305 (16%), Positives = 112/305 (36%), Gaps = 20/305 (6%) Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P + + ++ NTE++ I N S + P A L+++ + + PK Sbjct: 55 MPLALFIAVILFTSKLSSNTEIIAITNAKVSFTRFLYPYFIGASLVTLLSLAMNHYVVPK 114 Query: 125 CRSTIKQLSAK-AQLALTFSYLE--ENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 K K + + L+ N +L D YI I +N N + F ++ D Sbjct: 115 SSKIRKGFEKKYINSSKQSNALKYVSNFSLQLTDSTYIFIRSFNTANNMGYDFNSETYDG 174 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT-ESANSSTIVL 240 + + + + G R +D F L T + ++ +V Sbjct: 175 IKLISKLSSDNIMYNPKDSTFTLTGWRKRLIYEKRD---RIFSGNKLDTVFNFSTKDLVY 231 Query: 241 K---ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 K A + LL + + L Y EF+KR + + I +I++ Sbjct: 232 KSAFAQEMPSGELLKYINISKKRGVKNLNAYLVEFYKRTSLPIASYILTIIAV-----GL 286 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI-PILYLF----LFCISSIFLL 352 R+++ + +++ + + F + ++ + + + Y++ +F + +I+L Sbjct: 287 SFRKKRGGTGVNLAIGVGIMFLYVFFMKVGEVLGSVAGVDSLAYVWIPNIIFGVVAIYLY 346 Query: 353 MIKKK 357 + +K Sbjct: 347 LNGRK 351 >gi|169656684|ref|YP_001428997.2| putative permease YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|290954454|ref|ZP_06559075.1| putative permease YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica URFT1] gi|295312116|ref|ZP_06802927.1| putative permease YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica URFT1] gi|164551752|gb|ABU62041.2| putative permease YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica FTNF002-00] Length = 353 Score = 80.0 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 36/204 (17%), Positives = 87/204 (42%), Gaps = 9/204 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + YI R + SFL+ + + ++ L +++ +++ + +++ + +P + Sbjct: 3 LNRIDRYIFRTVFSSFLIVSIIFCILFFIFTYLAQVSNNTANVSNFELIIN-TLIQLPGI 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P C + L+ + N+E++++ + G S + K V+ + ++ S+ + Sbjct: 62 LYTLLPACAMVGALMGLSLLANNSEIIVLRSFGRSTAQIAKGVILVGLIGSVTTMVFGGY 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + + +Y +L+F+ D + N GI +D Sbjct: 122 IAP--------ILQRQVDTNMVTYNTHDLWFKTPDGFMNIANIEPTNGKAYGIRKFMVQD 173 Query: 181 TQTHKIYYAQSGSIDLDRQAIILN 204 + +I YA+S + D A + N Sbjct: 174 NKVREIRYAESATYINDASANVFN 197 >gi|254369661|ref|ZP_04985671.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica FSC022] gi|157122620|gb|EDO66749.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica FSC022] Length = 353 Score = 80.0 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 36/204 (17%), Positives = 87/204 (42%), Gaps = 9/204 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + YI R + SFL+ + + ++ L +++ +++ + +++ + +P + Sbjct: 3 LNRIDRYIFRTVFSSFLIVSIIFCILFFIFTYLAQVSNNTANVSNFELIIN-TLIQLPGI 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P C + L+ + N+E++++ + G S + K V+ + ++ S+ + Sbjct: 62 LYTLLPACAMVGALMGLSLLANNSEIIVLRSFGRSTAQIAKGVILVGLIGSVTTMVFGGY 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + + +Y +L+F+ D + N GI +D Sbjct: 122 IAP--------ILQRQVDTNMVTYNTHDLWFKTPDGFMNIANIEPTNGKAYGIRKFMVQD 173 Query: 181 TQTHKIYYAQSGSIDLDRQAIILN 204 + +I YA+S + D A + N Sbjct: 174 NKVREIRYAESATYINDASANVFN 197 >gi|218885479|ref|YP_002434800.1| permease YjgP/YjgQ family protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756433|gb|ACL07332.1| permease YjgP/YjgQ family protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 361 Score = 80.0 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 47/364 (12%), Positives = 117/364 (32%), Gaps = 16/364 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+ R L + + + + R++ + SL++ P + Sbjct: 1 MSLLARYLFRNNLMLILPTLAIGTGLYILSDLFDRLDDFLEAGVSLSVAAWYFVAKTPLI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P F + T + L M+R EL+ + G S + + ++ ++ + Sbjct: 61 ISQILPAVFLLATLSQLCLMSRGRELIALQAGGISMGRIARVLVLCGLVWGGLQLGFSQV 120 Query: 121 IEPKCR-STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + + S + + N++F + T +G+ + Sbjct: 121 LGVSGEVEAARIWSEDVRGKTEATATLRNVWFTDGAYVVSLAEVVPAQGTGRGLAAYELS 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL----QTESANS 235 D + ++ + ++ L+ V P + S TL ++ Sbjct: 181 DDGLSILRVVRAATFTAGQRQWELH--GVTEFDPSG--YLSTRHDSLTLPLRQDVQAFLI 236 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + + L L + + + +E R+ +H +L L+ + A Sbjct: 237 TARNADPSRLPLWQLGD-AIDRLSASGSNVEGVRTAWHMKLA-----YAASLVVMAAVAA 290 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + I +SL I+F + F + + Q P L + + + +++ Sbjct: 291 AIVTWRDNIYLGIGLSLIITFLFYTMF-TVGGTLGQKGIVSPPLAAWGSNALILAVALLR 349 Query: 356 KKYT 359 + Sbjct: 350 LAWV 353 >gi|126640322|ref|YP_001083306.1| hypothetical protein A1S_0229 [Acinetobacter baumannii ATCC 17978] Length = 266 Score = 80.0 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 43/272 (15%), Positives = 106/272 (38%), Gaps = 10/272 (3%) Query: 89 IDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEEN 148 + + G S ++ V+ A+LL + F + P + + K+ ++ + Sbjct: 1 MRSVGISLWRIVGWVMRSALLLIVLSFALSEWVVPYTNEKAQSV--KSHRSVAALGEVKG 58 Query: 149 LFFRLDDDLYIKISKYNPNNTLQGIFIVD-SRDTQTHKIYYAQSGSIDLDRQAIILNDGE 207 + R + +I I N L+ I +VD ++D + A+ G D Q + + Sbjct: 59 YWSR-EGQRFIYIDYANSQGNLRDIQVVDFNKDYHLQSLINAEQGKFIQDGQWTLQKASQ 117 Query: 208 VHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLET 267 + + + ++ +S L + + L D + S L++ Y ++ +T Sbjct: 118 MDILTDGNSILNNHDQQSLGLALQPKYVHMVTLDPEDLSPSQLISFMRYMDEYS-QVPKT 176 Query: 268 YRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH 327 Y+ F +++ + L++ +RQ+ + I+L I G ++ ++ + Sbjct: 177 YQLAFWQKVASPFSLITLVLVACSFIFGP--LRQQSMGFRLVIALFIGLGFYYLQDFLGY 234 Query: 328 KI---EQNPYYIPILYLFLFCISSIFLLMIKK 356 +P + ++ + L + +LL + Sbjct: 235 ASLVYAPSPAWFVLMPIILMFGAGSYLLYRAR 266 >gi|325919211|ref|ZP_08181260.1| putative permease [Xanthomonas gardneri ATCC 19865] gi|325550311|gb|EGD21116.1| putative permease [Xanthomonas gardneri ATCC 19865] Length = 368 Score = 80.0 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 48/367 (13%), Positives = 116/367 (31%), Gaps = 23/367 (6%) Query: 5 ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 + Y+ R + + L++ ++ + V + + + Y +P + Sbjct: 9 DWYVGRAVLFTVLLTWAVLLGLDLVNAFASEAKNIGQGSYTFGHAFAYVAYTVPRRAYTL 68 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P + L + +EL + G SR + V+ LL+ + IS + P Sbjct: 69 FPTAAVIGALMGLGQLAATSELTALRALGVSRKRMSASVVAAMALLTAGMVISGETVGPW 128 Query: 125 CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISK-----YNPNNT---LQGIFIV 176 ++ L A+ + + + + D ++ + T L + + Sbjct: 129 AQNQADTLKTSARYNSDMAMARYSGLWAREGDTFLNALSGEEKLLDGGGTALDLHDVRLY 188 Query: 177 --DSRDTQTHKIYYAQSGSIDLDRQA-IILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 D+ Y A + +R L +V R + + + F Q++ + Sbjct: 189 HLDASGRLQQLTYAA----LAENRNGAWTLR--QVRRDTFQERSVQRETFPELPWQSQLS 242 Query: 234 NSSTIVLKANDQNLSFL-LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 ++ A +NLS L + Y ++ R W +P+ + + A Sbjct: 243 PAALAAGLAKPRNLSARDLEQSIEYRRRNGLDARDYEDQYWSR---WFYPLNVLALCLAA 299 Query: 293 AD-KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-NPYYIPILYLFLFCISSIF 350 +R +F+ + + G + + Y L + + Sbjct: 300 IPFSFGSLRSGGLGKRLFLGILFALGFWLLQLFFGRMAGALKLDYRIAYALPPMVMLGVS 359 Query: 351 LLMIKKK 357 + +++ Sbjct: 360 AWLFRRR 366 >gi|90423815|ref|YP_532185.1| permease YjgP/YjgQ [Rhodopseudomonas palustris BisB18] gi|90105829|gb|ABD87866.1| permease YjgP/YjgQ [Rhodopseudomonas palustris BisB18] Length = 362 Score = 80.0 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 47/362 (12%), Positives = 115/362 (31%), Gaps = 21/362 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSST----ESLNILLKISGYLI 57 + Y + + ++ + I+L+ + S ++++ S Y + Sbjct: 4 NTLSRYFAGRFVT---AALAVFAGLFVLLVFVDYIDLLRRAGGRPSISALLIVQTSVYRV 60 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 P +L + PFC + +++R EL++ G S + P L+ A+ L +F + Sbjct: 61 PQLLERLMPFCILIGAMTCYLALSRRLELVVARAAGISAWQFMAPALWSALALGVFATVV 120 Query: 118 ENIIEPKCRSTIKQLSAKAQLALTFSYLEENLF----FRLDDDLYIKISKYNPNN-TLQG 172 N + + KQ+ A+ + S + + F + I ++ L G Sbjct: 121 FNPMSANMQERAKQMEAEMFGDSSGSLQDASGFWINQVTTEGQAIINAARSQQQGALLTG 180 Query: 173 IFIV-DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 + + D + A+ +++ + R + + F Sbjct: 181 LSVFRFEPDFSFSERIEAREATLEPGFWRFK----NLRRYTLDGPPVDQDVFL-LPTTLT 235 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 A + L ++ + YR +FHK L + ++ ++ + Sbjct: 236 LAQVRNSFSTPETVSFWQLPGYIRSSESS-GFATAGYRLQFHKLLARPF--LLAAMVMLA 292 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 A+ R + + F ++ + + C+ S+ Sbjct: 293 ASVSLRFFRFGGVQKMVLSGVGAGFLLYILSKVTEDLSKAELMHPLAAAWLPVCVGSLAG 352 Query: 352 LM 353 + Sbjct: 353 FL 354 >gi|188993098|ref|YP_001905108.1| Predicted YjgP/YjgQ family permease [Xanthomonas campestris pv. campestris str. B100] gi|167734858|emb|CAP53069.1| Predicted YjgP/YjgQ family permease [Xanthomonas campestris pv. campestris] Length = 368 Score = 80.0 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 51/366 (13%), Positives = 113/366 (30%), Gaps = 21/366 (5%) Query: 5 ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 + Y+ R + + L++ ++ + V + + S + Y +P + Sbjct: 9 DWYVGRAVLFTVLLTWAVLLGLDVVNAFASEAKSIGQGSYSFGHAIAFVAYTVPRRAYTL 68 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P + L + +EL + G SR + V+ LL+ + IS + P Sbjct: 69 FPTAAVIGALMGLGQLAATSELTALRALGVSRKRMSASVVVAMALLTATMVISGETVGPW 128 Query: 125 CRSTIKQLSAKAQ--LALTFS-----YLEEN-LFFRLDDDLYIKISKYNPNNTLQGIFIV 176 +S L A+ +T + + E F + TL + + Sbjct: 129 AQSQADTLKTSARYQSDMTSARYSGLWAREGDTFLNALSGEEQLLDNGGTALTLHDVRLY 188 Query: 177 --DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 D++ Y A R + +V R + + + F Q++ Sbjct: 189 HLDAKGQMQQLTY-AAVAEHRDGRWTLR----QVRRDTFQERSVQRETFPELPWQSQLNP 243 Query: 235 SSTIVLKANDQNLSFL-LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + A +NLS L + Y ++ R W +P+ + + A Sbjct: 244 KALAAGLAKPRNLSVHDLGQSIEYRRRNGLDASDYEDQYWSR---WFYPLNVLALCLAAI 300 Query: 294 D-KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-NPYYIPILYLFLFCISSIFL 351 +R +F+ + + G + + Y L + + Sbjct: 301 PFSFGSLRSGGLGKRLFLGILFALGFWLLQLFFGRMAGALKLDYRIAYALPPMVMLGVSA 360 Query: 352 LMIKKK 357 + +++ Sbjct: 361 WLFRRR 366 >gi|119953584|ref|YP_945794.1| hypothetical membrane spanning protein [Borrelia turicatae 91E135] gi|119862355|gb|AAX18123.1| hypothetical membrane spanning protein [Borrelia turicatae 91E135] Length = 429 Score = 80.0 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 38/204 (18%), Positives = 83/204 (40%), Gaps = 3/204 (1%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 +E YI+ + FL++ LF F+ ++ QIL + ++ + Y +P ++ + Sbjct: 8 YESYIIIEFFKYFLITFLFFFFVFFINQILFFMRILLQNYVPFLKAFIFVIYSLPMIIAL 67 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 PF + + N E+L + G S L+ P L +++++ FI+ + + P Sbjct: 68 SPPFAALLSVILTIYRFKLNNEILAFRSIGISIFNLLVPFFKLGVVIALISFITNDFLLP 127 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 ++ + + + L+ + DL + + F ++R Sbjct: 128 LGSIGRLKIFNEIKEEIPHLILKPYS-SKQYGDLIFVSGEKSETGYKNVTFFDNTRLKGY 186 Query: 184 HKIYYAQSGSIDLDRQAI--ILND 205 +I A+ +I + + ILND Sbjct: 187 DRILMARELNIQKENYQVYFILND 210 >gi|289663726|ref|ZP_06485307.1| YjgP/YjgQ family permease [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289668603|ref|ZP_06489678.1| YjgP/YjgQ family permease [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 368 Score = 80.0 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 51/369 (13%), Positives = 112/369 (30%), Gaps = 27/369 (7%) Query: 5 ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 + Y+ R + + L++ ++ + V + + + + Y +P + Sbjct: 9 DWYVGRVVLSTVLLTWAVLLGLDLVNAFASEAKNIGQGSYTFGHAVAYVAYTVPRRAYTL 68 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P + L + +EL + G SR + V+ LL+ + IS I P Sbjct: 69 FPTAAVIGALMGLGQLAATSELTALRALGVSRKRMSASVVAAMALLTASMVISGETIGPW 128 Query: 125 CRSTIKQLSAKAQLA-------LTFSYLEEN-LFFRLDDDLYIKISKYNPNNT---LQGI 173 ++ L A A+ + + E F + + T L + Sbjct: 129 AQNQADTLKASARYNSDMASSRYSGLWAREGNTFLNALSG---EEKLLDGGGTALDLHDV 185 Query: 174 FIV--DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 + D Y A R + +V R + + + F Q++ Sbjct: 186 RLYHLDPSGRMQQLTY-ASVAEHRDGRWTLR----QVRRDTFQERSVQRETFPELPWQSQ 240 Query: 232 SANSSTIVLKANDQNLSFL-LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 ++ A +NLS L + Y ++ R W +PV + + Sbjct: 241 LNPAALAAGLAKPRNLSAHDLEQSIEYRRRNGLDARDYEDQYWSR---WFYPVNVLALCM 297 Query: 291 VAAD-KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-NPYYIPILYLFLFCISS 348 A +R +F+ + + G + + Y L + Sbjct: 298 AAIPFSFGSLRSGGLGKRLFLGILFALGFWLLQLFFGRMAGALKLDYRIAYALPPMVMLG 357 Query: 349 IFLLMIKKK 357 + + +++ Sbjct: 358 VSAWLFRRR 366 >gi|307946742|ref|ZP_07662077.1| permease [Roseibium sp. TrichSKD4] gi|307770406|gb|EFO29632.1| permease [Roseibium sp. TrichSKD4] Length = 364 Score = 80.0 bits (196), Expect = 6e-13, Method: Composition-based stats. Identities = 50/362 (13%), Positives = 119/362 (32%), Gaps = 25/362 (6%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTV 60 ++ +Y +S L L + ++ +L+ + ++ + IS +P + Sbjct: 5 RTLAIYFSARFFKSILGLFLLAAVLIFLFDVLELVRRGGDQEGFTVVRVALISILRVPLL 64 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V PF + +++R EL++ +G S P + + +++ ++ N Sbjct: 65 LEQVIPFAVLFGSILAFVTLSRALELVVARASGISVWQFAAPAVVVGLIIGTLSVVAYNP 124 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + + +A + L+ D++++ + + L ++D Sbjct: 125 LAVWLQHRSDEAAAGLFGSEQSFLLQ------TTQDVWVRQDGLDGESVLLAKQLLDGGT 178 Query: 181 TQTHKIYYA-----------QSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ 229 +A ++ + L Q L D V+ + + +Y Sbjct: 179 RLLDVTIFAFDKEGSFKERVEAATARLGDQIWFLEDVTVYTTERDPQQYGRYEVSTYLTA 238 Query: 230 TESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 TE S + +L + N Y ++ L + L ++ +I Sbjct: 239 TEVRESIGSPESISFWSLPRFIELARN----AGLPAYRYTLQYQTLLARPL--LLTAMII 292 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 I AA + R I + F ++ S + PI+ + I + Sbjct: 293 IAAAVSLRVSRFGGLGSMILGGIVAGFVLYV-LSELAKDFGGAGIVPPIVAAWAPGIFGV 351 Query: 350 FL 351 + Sbjct: 352 LM 353 >gi|153822424|ref|ZP_01975091.1| conserved hypothetical protein [Vibrio cholerae B33] gi|126520067|gb|EAZ77290.1| conserved hypothetical protein [Vibrio cholerae B33] Length = 164 Score = 79.6 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 65/158 (41%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I + + + V ++ +I+ ++++ V + L L IP + Sbjct: 3 KILDWYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGEGSYDLLQALLFVVLSIPRDV 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L ++ ++EL+++ G S++ + VL AI L I + + Sbjct: 63 EMFFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIIVTLLGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI 159 P+ + + + A A + ++ R +D Sbjct: 123 APQAQKMARDMRAFATSGGAIMSVRTGVWARDANDFIF 160 >gi|187918661|ref|YP_001884227.1| hypothetical membrane spanning protein [Borrelia hermsii DAH] gi|119861509|gb|AAX17304.1| hypothetical membrane spanning protein [Borrelia hermsii DAH] Length = 429 Score = 79.6 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 39/204 (19%), Positives = 83/204 (40%), Gaps = 3/204 (1%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 +E YI+ + FL++ LF F+ ++ QIL + ++ + Y +P V+ + Sbjct: 8 YESYIITEFCKYFLITFLFFFFVFFINQILFFMRILLQNYVPFFKAFIFVIYSLPMVIAL 67 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 PF + + N E+L + G S L+ P L +++++ FI + + P Sbjct: 68 SPPFAALLSVILTIYRFKLNNEILAFRSIGISIFDLLVPFFKLGVVIALIAFILNDFLLP 127 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 ++ + + + L+ + DL + + F ++R Sbjct: 128 LGSIGRLKIFNEIKEEIPHLILKPYS-SKQYGDLIFVSGEKSDTGYRNVTFFDNTRLKGY 186 Query: 184 HKIYYAQSGSIDLDRQAI--ILND 205 +I+ A+ +I + + ILND Sbjct: 187 DRIFMARELNIQKENYQVYFILND 210 >gi|83945295|ref|ZP_00957644.1| hypothetical protein OA2633_00970 [Oceanicaulis alexandrii HTCC2633] gi|83851465|gb|EAP89321.1| hypothetical protein OA2633_00970 [Oceanicaulis alexandrii HTCC2633] Length = 367 Score = 79.6 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 39/310 (12%), Positives = 87/310 (28%), Gaps = 23/310 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPT 59 + Y+ + + + I + +I ++ + + S L +S P Sbjct: 2 IGRLWRYLFIQTLIGLIGAAVIITAVILLIDFVETSRDIGTRVGISAFQALHLSLLKAPL 61 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ PF +NR +EL+++ +G S ++ PV LA L ++ N Sbjct: 62 LVQDTLPFIVLFGVLFTFFRLNRRSELIVMRASGYSAWRILAPVAILAALTGAISTLALN 121 Query: 120 IIEPKCRSTIKQLSAKAQ----LALTFSYLEENLFFRLDDDLYIKISKYNPNN------- 168 + + + + + YI I+ Sbjct: 122 PLGAASNARFEATREALFEGEGQSSGANQSGPIWLRETTATGYIMITAQQQGGDDATLTE 181 Query: 169 -TLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 + + +S + A+ ++ ++ +P + + + Sbjct: 182 PVFRQYVLSESGAPLLDRRITAERAELNGGFWSLT----NAIEYAPGGQATELGD-VALP 236 Query: 228 LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEF--HKRLTQWLFPVIF 285 + L + R L + E H L Q L V Sbjct: 237 TNVGRQALFERARSPGAVSFWQL---PAVIASARDAGLSSLAYELRWHGLLAQPLMLVAA 293 Query: 286 GLISIVAADK 295 L+ I A + Sbjct: 294 ALMGIAATLR 303 >gi|297172254|gb|ADI23232.1| predicted permeases [uncultured nuHF2 cluster bacterium HF0770_13K08] Length = 351 Score = 79.6 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 58/360 (16%), Positives = 125/360 (34%), Gaps = 18/360 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K YI R F++ V ++ V + V + +S L+ + L+P +L Sbjct: 4 KIISKYIASEFNRYFMLFLGAFVLMSLVGNFFGNLADVFTDWQSFLKFLQETALLLPLLL 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 ++ P + T +S+N+N ELL I ++G L PVL ++ L++ F + S+N + Sbjct: 64 ELIIPITVLLATIATYSSLNKNAELLAIRSSGIGGWRLAFPVLAVSALIASFAYFSQNYM 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 T + A+L L+ ++ N + I + + Sbjct: 124 YTWMHQTWVKQENSARL--------PPLWKVGEEQSIYYFGNRQHNGRISSITSFNWKQI 175 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + + + I +D + + + + ++ + I + Sbjct: 176 PFQLLGRTAIERGEQQNNSWIFHDIQKYIFQDENLRLEHVEQWRIETEKLPTVPFDIPIS 235 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + Q L L N + + Y ++ I LI + + R+ Sbjct: 236 PHHQPLLDLYE-NTLKLQSEGQDVTRYWVAIFQKTAYPFQIFIMVLIGL--GLSASYNRR 292 Query: 302 RKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLF----LFCISSIFLLMIKK 356 + +++S G+ FW + I + P + +F +++LL + Sbjct: 293 G--MAAESLAISCLLGILFWILNQITMAVGGAGLIFPFFAAWSGNIIFLALALWLLSYNR 350 >gi|326388615|ref|ZP_08210208.1| permease YjgP/YjgQ [Novosphingobium nitrogenifigens DSM 19370] gi|326206866|gb|EGD57690.1| permease YjgP/YjgQ [Novosphingobium nitrogenifigens DSM 19370] Length = 356 Score = 79.6 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 47/329 (14%), Positives = 111/329 (33%), Gaps = 23/329 (6%) Query: 38 LVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRI 97 ++++ LL+ P ++ P+ + T L ++N+N+E++ + G S Sbjct: 36 ILAAKGNGQMELLRYGMLRTPQLVSRFLPYSVLLATIITLMTLNQNSEVIAMKAAGLSAH 95 Query: 98 TLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTF-SYLEENLFFRLDDD 156 ++ P+ ++ S+F F + + +T+K A+ S ++ N++ + + Sbjct: 96 QVLAPLFLVSAAASVFTFTFNERVVVRSTATLKAWQDVDYGAVPTDSDVKSNVWLQDGPN 155 Query: 157 LYI--KISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI 214 + IS + + RD + + P Sbjct: 156 IVFAKTISGRGTATRMSEVSWY-RRDPTGVVTEIVHAPLATYTHPGWRFD-------HPT 207 Query: 215 SKDISIMKFKS------YTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETY 268 S D+ + Y E A+ ++++ L + + Sbjct: 208 SFDVQSAALTTLPGPKVYASGVEPTQIIIRKTDADRESITQL-SQSIAEIQAAGYRTNEL 266 Query: 269 RSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFW---GFSYI 325 ++ +++ L V+ L+ VAA L R K I +++ F F + Sbjct: 267 DGKWWHKISGPLSAVLMPLLGSVAAFG--LARSGKLFVRAVIGMALGFAYFVVDNAALAM 324 Query: 326 IHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + +P+ LF + +L+ Sbjct: 325 GNFGGYSPFLAAWSPFLLFLLIGETVLIR 353 >gi|209964865|ref|YP_002297780.1| predicted permease YjgP [Rhodospirillum centenum SW] gi|209958331|gb|ACI98967.1| predicted permease YjgP [Rhodospirillum centenum SW] Length = 364 Score = 79.6 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 60/356 (16%), Positives = 124/356 (34%), Gaps = 18/356 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTVL 61 + LYI R FL ++ I +++ ++ + ++ + I+L + +P + Sbjct: 6 TLSLYIGRQFVLWFLAILGGMLAIVYLLDTVELLRRAANKPDAAFQIVLTMGLLKLPEIG 65 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF + R EL+++ +G S + PVL L+ + L N I Sbjct: 66 QEIVPFVVLFGGMYTFWRLTRTQELVVVRASGISVWQFMAPVLTATFLIGMTLVGVLNPI 125 Query: 122 EPKCRSTIKQLSAKAQLALTFSY--LEENLFFR---LDDDLYIKISKYNPNN-TLQGIFI 175 +QL + + S E ++ R I P L+ + + Sbjct: 126 FSAMLGRYEQLENRYLRGMKSSLDVAESGIWLRQVGEPQAYLIHADAIVPGTLELRQVMV 185 Query: 176 -VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 ++ D Q + A S ++ L D +R + + + +Y L TE Sbjct: 186 LLNESDGQVSGRFDAASATLRDG--FWELRDAWFNRPGRVGEFL-----PAYRLPTELTE 238 Query: 235 SSTIVLKANDQNLSFLLNPN-PNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 A+ LSF P +R +H L Q + ++ +I + AA Sbjct: 239 QKIQEAFASPDTLSFWELPGFIATLEATGLSSVRHRLHWHSLLAQPV--LLCAMILLAAA 296 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 VR+ + I + ++ + +F ++ + + +S + Sbjct: 297 FAMRQVRRGGALTLIALGIAAALLLFVMQDIVLALGMSGTIPVLLAAWAPAGVSVM 352 >gi|82701537|ref|YP_411103.1| permease YjgP/YjgQ [Nitrosospira multiformis ATCC 25196] gi|82409602|gb|ABB73711.1| permease YjgP/YjgQ [Nitrosospira multiformis ATCC 25196] Length = 354 Score = 79.6 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 42/356 (11%), Positives = 116/356 (32%), Gaps = 4/356 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+ + ++ ++ + + +L +++ V T S+ + L+P Sbjct: 1 MTIIYRYLGLQVLMGLGIATAVLLPLFGFLDLLDQLDDVGKGTYSVKDAFLYTALLLPRR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + PF M L + +EL + G S + + + + I+L +F+ + + Sbjct: 61 FIQLAPFIALMGNVTALGRLAVGSELTALRGAGVSPLGISLAPVVVGIILLLFITVLDQF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ + A A + ++ R + ++ ++I + I I+ D Sbjct: 121 VAPQFQQKAISSRAAALEKSAALGQQLGIWTRDERNI-LRIGEMLHARRAANIEIMHFDD 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 Y + ++ L D + + + +I + + + + ST+ Sbjct: 180 NGFLLRYTYAKYADIINEGLWELRDVVIKTFNGNAMEIVSRESVPWEPFLKEEDISTLTK 239 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + + L + + Y ++ L + L+SI Sbjct: 240 SPESLSPAELFLH-VHFLRATGQESGAYELALWRKAGGALTTIAMLLLSIPFVFGSVRAG 298 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 ++ + + + + NP +L + ++ +++ Sbjct: 299 LGNRLVVASMLGISVYLFDQITANAGLLLHLNPALSALLPGG--VLIAVAYFWLRR 352 >gi|159043738|ref|YP_001532532.1| permease YjgP/YjgQ family protein [Dinoroseobacter shibae DFL 12] gi|157911498|gb|ABV92931.1| permease YjgP/YjgQ family protein [Dinoroseobacter shibae DFL 12] Length = 365 Score = 79.6 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 54/364 (14%), Positives = 118/364 (32%), Gaps = 15/364 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + + Y R SFL + W+ ++ + +SS L ++ +P + Sbjct: 2 TLQWYFARRFVMSFLSMLGIFAGLIWMTDTVESLRSLSSDDFGLQEAAALALLQLPATIY 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRIT-LIKPVLFLAILLSIFLFISENII 121 V P + T + M R +EL++ G S I LI PV+ ++ I + + I+ Sbjct: 62 EVIPLIMVLATITLFLKMARTSELIVTRAAGRSAIRSLIAPVIVAGLIGGIGISVLNPIV 121 Query: 122 EPKCRSTIKQL-SAKAQLALTFSYLEENLFFR---LDDDLYIKISKYNPNNT-LQGI-FI 175 R + + + + E L+ R + + I + + T L + F+ Sbjct: 122 AATSRIAEETRDEVRGRATSVLALSSEGLWLRQAAPEGQIVIHAAGASLGGTILYDVTFL 181 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGE--VHRKSPISKDISIMKFKSYTLQTESA 233 D + A + + R +P + + + Sbjct: 182 RFDADALPIERVAASRAELVPGAWDLTGVKVWDLTGRLNPEAG-VRTSAWMQVPSDLTLD 240 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + + L + ++R H L +F V LI AA Sbjct: 241 QIRDSFGDPSAIPIWELPA-FIDQLEAAGFAALSHRVWLHTELASPVFLVAMVLIG--AA 297 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWG--FSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 R + + ++ + F +++ F+ ++ + + P + L + Sbjct: 298 FTMRHTRFGRTGLMVLFAVLLGFSMYFLKSFAQVLGEAGKIPVLAAAWFPPLAGVFLSLA 357 Query: 352 LMIK 355 L++ Sbjct: 358 LLLH 361 >gi|284799560|ref|ZP_06390217.1| permease, YjgP/YjgQ family [Neisseria subflava NJ9703] gi|284797388|gb|EFC52735.1| permease, YjgP/YjgQ family [Neisseria subflava NJ9703] Length = 181 Score = 79.6 bits (195), Expect = 8e-13, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 54/154 (35%), Gaps = 5/154 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +I+ + + + + L + +P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEIINEVGDLGKGSYNGAKLGQYVLMQMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + +EL +I +G S L+ + ++ +I Sbjct: 61 AYELMPLAVLIGGLISLSQLASGSELTVIKASGMSTKKLLLILSQFGLIFAIATVALGEW 120 Query: 121 IEPKCRSTIKQLSA-----KAQLALTFSYLEENL 149 + P + + A K T +L+E Sbjct: 121 VAPTLSQKAENIKAAAINGKISTGNTGLWLKEKT 154 >gi|291060242|gb|ADD72977.1| putative permease, YjgP/YjgQ family [Treponema pallidum subsp. pallidum str. Chicago] Length = 372 Score = 79.6 bits (195), Expect = 8e-13, Method: Composition-based stats. Identities = 57/358 (15%), Positives = 125/358 (34%), Gaps = 13/358 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK ++Y+L F + + I I IL + S+ + L+KI IP Sbjct: 1 MKILQVYMLDMFLPIFFLVLVCASMILDAIDILVNLTQFISNGYRFSSLVKIWYVSIPHY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P T + + E L I G S +++ P L+I +F +N Sbjct: 61 VLLCCPLSVLFAATYTVRILYVQNEFLAIHFGGLSFFSIVGPWFGFMCFLAIGIFAFDNS 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN--TLQG-IFIVD 177 + +S ++ A+ ++ E ++ D I I+ L + I+ Sbjct: 121 VVVVSQSKKDEIIAR-TVSYAQGNSENDVVASSFDGKIISIAGAYHRGQKVLVDMLVIMK 179 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + K+ A + DR +L V+ + K + S+ L+ Sbjct: 180 NSNGTIQKLIEAHTAHWQKDR--WVLIKPVVYTITHEMKLMVSEYLDSFELREPLELFDH 237 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 ++ + + Y + F+K+ FP+ ++ ++ + Sbjct: 238 QDFLTKGMSIQK-IKETLHTLKYASKPHRELSIRFYKKF---YFPLTMCIMLCLSFLTGS 293 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ---NPYYIPILYLFLFCISSIFLL 352 +++R I IF S+ ++ + I + +P++ + F ++ Sbjct: 294 FLKKRSLIMYIFCSVVLASAYYVVEMTSIVCAREEYFSPFWGVFFPVLTFLFLIFYVW 351 >gi|146277167|ref|YP_001167326.1| permease YjgP/YjgQ family protein [Rhodobacter sphaeroides ATCC 17025] gi|145555408|gb|ABP70021.1| permease YjgP/YjgQ family protein [Rhodobacter sphaeroides ATCC 17025] Length = 364 Score = 79.6 bits (195), Expect = 8e-13, Method: Composition-based stats. Identities = 48/370 (12%), Positives = 107/370 (28%), Gaps = 28/370 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 YI R R + L + +I +L ++ S +L +S +P + Sbjct: 2 ILSRYIARRFLRMVFIVFLVFFGLMMLIDVLDQMRRFSDEGITLVQAGLLSLLRVPATIY 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + + + R +EL+++ G S + + + +A+ + N I Sbjct: 62 TILPLIVILAAVALFLGLARTSELVVVRAAGRSGLRFLVAPMIVALAIGAAAVTVLNPIV 121 Query: 123 PKCRSTIKQLSAKAQLALTF--SYLEENLFFR---LDDDLYIKISKYNPNNT-LQGIFIV 176 +++ S EE L+ R + I ++ N + T L + + Sbjct: 122 AGTSRQYDAAASRLARGEASILSISEEGLWLRQGGAEGQTVIHAARSNTDGTRLYAVTFL 181 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT--------- 227 + A L G S D+++ ++ Sbjct: 182 TFDGNGLPRSRVAAE--------QAALETGYWQLSGAKSWDLTLANPEASANLEGNIRVP 233 Query: 228 LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGL 287 + + L +R L ++ + Sbjct: 234 SDLTREGIQDSFGDPSAIPIWELPA-YVAGLERAGFSARKHRVWMQMELALPF--MLAAM 290 Query: 288 ISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIE--QNPYYIPILYLFLFC 345 + + A R + ++L FG+F+ ++ E Q P + L Sbjct: 291 VLVAAGFTMRHSRFGGTGRMVLLALLSGFGLFFLRNFAQVLGENGQIPILLAAWSPPLIG 350 Query: 346 ISSIFLLMIK 355 + L++ Sbjct: 351 VMGSLGLLLH 360 >gi|78049235|ref|YP_365410.1| YjgP/YjgQ family permease [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325925500|ref|ZP_08186891.1| putative permease [Xanthomonas perforans 91-118] gi|78037665|emb|CAJ25410.1| putative YjgP/YjgQ family permease [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325544092|gb|EGD15484.1| putative permease [Xanthomonas perforans 91-118] Length = 368 Score = 79.6 bits (195), Expect = 8e-13, Method: Composition-based stats. Identities = 50/369 (13%), Positives = 111/369 (30%), Gaps = 27/369 (7%) Query: 5 ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 + Y+ R + + L++ ++ + V + + + + Y +P + Sbjct: 9 DWYVGRVVLFTVLLTWAVLLGLDLVNAFASEAKNIGQGSYTFGHAVAYVAYTVPRRAYTL 68 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P + L + +EL + G SR + V+ LL+ + IS I P Sbjct: 69 FPTAAVIGALMGLGQLAATSELTALRALGVSRKRMSASVVAAMALLTASMVISGETIGPW 128 Query: 125 CRSTIKQLSAKAQLA-------LTFSYLEEN-LFFRLDDDLYIKISKYNPNNT---LQGI 173 ++ L A A+ + E F + + T L + Sbjct: 129 AQNQADTLKASARFNSDMASSRYAGLWAREGDTFLNALSG---EEKLLDGGGTALDLHDV 185 Query: 174 FIV--DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 + D Y A R + +V R + + + F Q++ Sbjct: 186 RLYHLDPSGRMQQLTY-ASVAEHRDGRWTLR----QVRRDTFQERSVQRETFPELPWQSQ 240 Query: 232 SANSSTIVLKANDQNLSFL-LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 ++ A +NLS L + Y ++ R W +P+ + + Sbjct: 241 LNPAALAAGLAKPRNLSAHDLEQSIEYRRRNGLDARDYEDQYWSR---WFYPLNVLALCM 297 Query: 291 VAAD-KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-NPYYIPILYLFLFCISS 348 A +R +F+ + + G + + Y L + Sbjct: 298 AAIPFSFGSLRSGGLGKRLFLGILFALGFWLLQLFFGRMAGALKLDYRIAYALPPMVMLG 357 Query: 349 IFLLMIKKK 357 + + +++ Sbjct: 358 VSAWLFRRR 366 >gi|32266101|ref|NP_860133.1| hypothetical protein HH0602 [Helicobacter hepaticus ATCC 51449] gi|32262150|gb|AAP77199.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449] Length = 339 Score = 79.2 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 64/354 (18%), Positives = 128/354 (36%), Gaps = 31/354 (8%) Query: 4 FELYIL---RCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 F+ Y+ I F + LFI + +I I R ++ S L + YLIP Sbjct: 2 FKRYLFMSFAQIFFPFFLVLLFIASVVLLIDIAGRTYVI---KMSFIDLGTLFLYLIPGS 58 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P F + + + EL++ + G + ++K L + +L +I LF+ + Sbjct: 59 LFFIIPITFFAALVLSVAKLTYDYELMVCFSLGAKPLDIVKFFLPITLLATIILFVFSLV 118 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P S K A+ + + + ++ F + D + + + + + Sbjct: 119 MLPLANSASKNFVAQKKADIDVN-IKSGEFGQKLGDWLVYVDS-AHKRIYKNLILFSENG 176 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + A+SG + ++ LN + S +K Y + N S L Sbjct: 177 FEGDTFIVAESGKTNNNQGLFELN---LQEGSAYFASPEELKRVDYHQMSVRQNVSEPQL 233 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHK---RLTQWLFPVIFGLISIVAADKRA 297 ++ D + S+ H+ +L Q + +F L S+ Sbjct: 234 RSYDLF---------------EYWGNVFTSDSHQKPRKLAQAVMVSLFPLTSLFLVPLFG 278 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + R + + + S +++ ++I E P I+ FL+C S L Sbjct: 279 IANPRFHSNMSYFYVIASVALYFVLTHIAS--EHFPLIGMIIIPFLWCALSFGL 330 >gi|118497254|ref|YP_898304.1| membrane protein of unknown function [Francisella tularensis subsp. novicida U112] gi|118423160|gb|ABK89550.1| conserved membrane protein of unknown function [Francisella novicida U112] Length = 353 Score = 79.2 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 86/204 (42%), Gaps = 9/204 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + YI R + SFL+ + + ++ L +++ +++ + +++ + +P + Sbjct: 3 LNRIDRYIFRTVFSSFLIVSIIFCILFFIFTYLAQVSNNTANVSNFELIIN-TLIQLPGI 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P C + L+ + N+E++++ + G S + K V+ + ++ S+ + Sbjct: 62 LYTLLPACAMVGALMGLSLLANNSEIIVLRSFGRSTAQIAKGVILVGLIGSVTTMVFGGY 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + + +Y +L+F+ D + GI +D Sbjct: 122 IAP--------ILQRQVDTNMVTYNTHDLWFKTPDGFMNIANIEPTKGKAYGIRKFMVQD 173 Query: 181 TQTHKIYYAQSGSIDLDRQAIILN 204 + +I YA+S + D A + N Sbjct: 174 NKVREIRYAESATYINDASANVFN 197 >gi|257457656|ref|ZP_05622823.1| conserved hypothetical protein [Treponema vincentii ATCC 35580] gi|257445042|gb|EEV20118.1| conserved hypothetical protein [Treponema vincentii ATCC 35580] Length = 300 Score = 79.2 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 46/292 (15%), Positives = 95/292 (32%), Gaps = 13/292 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y+L+ F+++ LF + + + + + + LL++ +P Sbjct: 1 MKILQRYLLQLFFPVFVITILFFILLLQLGDLFLNLAQYLQNQVRFVTLLRVMYLYLPKC 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P ++ + +M EL I +G L+ P++ LSI +F E+ Sbjct: 61 ISFAMPLSVLFASSYTMGNMYAKNELTSIFASGMPLTVLVAPLVLCGFALSIGMFYFEDR 120 Query: 121 IEPKCRSTIKQLSAKA---QLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIV 176 I + L + Q L S L + + Y+ N L + IV Sbjct: 121 ILIHFQRQKIALVNELLEPQQNLNSSDL---VILSESGKIVYFADYYDDNRKELSNVLIV 177 Query: 177 DSRD-TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + + S D AI D ++ + + S Sbjct: 178 MRTESGDVSTVIKGSSAQWQTDHWAI--TDKSIYTFTAENDVHYQDAIDEGLFSEPSETF 235 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYR---SEFHKRLTQWLFPVI 284 + ++ +++ N + + + + FH RL + L Sbjct: 236 QRNITSIDEMSIAQAKVFIDNLKKWACPTMNIFLNITAVFHFRLRRSLCCFS 287 >gi|46580073|ref|YP_010881.1| permease [Desulfovibrio vulgaris str. Hildenborough] gi|120602469|ref|YP_966869.1| permease YjgP/YjgQ family protein [Desulfovibrio vulgaris DP4] gi|46449489|gb|AAS96140.1| permease, putative [Desulfovibrio vulgaris str. Hildenborough] gi|120562698|gb|ABM28442.1| permease YjgP/YjgQ family protein [Desulfovibrio vulgaris DP4] gi|311233928|gb|ADP86782.1| permease YjgP/YjgQ family protein [Desulfovibrio vulgaris RCH1] Length = 360 Score = 79.2 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 47/367 (12%), Positives = 110/367 (29%), Gaps = 14/367 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+ R + L + + + + R++ + + N+ + P + Sbjct: 1 MTLLFRYLFRNNLQVILPTLAVGTGLYLLSDLFDRLDDILEAGVPGNVAIWYFVAKTPLI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P F + L M+R+ EL+ + G S + + + +L ++ + Sbjct: 61 ISQILPAVFLLAALIQLCLMSRDRELMALQAGGVSFGAIARFFVVYGLLWAVLQLGFSQV 120 Query: 121 IEPKCRST-IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + + + + + N++F DD+ I + P F Sbjct: 121 LGVAGERESARIWQEQVRGRTPGTRDLTNVWFT-DDNHVIHLEVVTPALRKGQGFAAYGL 179 Query: 180 DTQ---THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + A+ + L D EV ++D K ++ Sbjct: 180 AADGIHIDTVIRAK--AFTGTAGTWKLQDVEVF----STRDFGHAKLPEMSIAIGQDPQD 233 Query: 237 TIVLKANDQNLSFLLNP---NPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 V+ L +E R+ +H +L V+ GL+++ Sbjct: 234 FAVIDPGADPQRLPLWQLGDAVEKLRTAGSNVEGLRTAWHMKLAYAASLVVMGLLAVAMV 293 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 R + + +F L + + L S+ LL+ Sbjct: 294 TWRDNIYLATGLALVFTFLFYTMFTIGSTLGQKGIVSPPIAAWGADILVGVVASARLLLV 353 Query: 354 IKKKYTK 360 ++ + + Sbjct: 354 LRPRSLR 360 >gi|254510403|ref|ZP_05122470.1| permease, YjgP/YjgQ family [Rhodobacteraceae bacterium KLH11] gi|221534114|gb|EEE37102.1| permease, YjgP/YjgQ family [Rhodobacteraceae bacterium KLH11] Length = 382 Score = 79.2 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 56/338 (16%), Positives = 118/338 (34%), Gaps = 12/338 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y R +SFL+ + + +I +++++ S S LL+++ P + Sbjct: 18 ILDRYFARRFVQSFLVIGGIFLTLMILIDLIEQVRRFDSVDLSFGQLLQLTLLNTPAAIS 77 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + T + + R++EL++ G S I + +F+A+++ F N I Sbjct: 78 EMLPLLMILATIALFVGLARSSELVVTRAIGRSGIRALLAPVFIALMIGGFAVALLNPIA 137 Query: 123 PKCRSTIKQLS--AKAQLALTFSYLEENLFFR---LDDDLYIKISK--YNPNNTLQGIFI 175 ++L+ + Q + S E L+ R I + + L + I Sbjct: 138 AATSEEFQRLADGYRNQGSSALSISGEGLWLRQASASGQSVIHATGTVNGDDFALHDVTI 197 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI-SKDISIMKFKSYTLQTESAN 234 A DL+ L +V + + + + L T Sbjct: 198 TTFSSDGKPNQQIAAR-QADLENGYWTLRQAKVWTLEDDLNPETNATTHEVLNLPTTLTR 256 Query: 235 SSTIVLKANDQNLS-FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + ++S + L ++ + Y +L + LF V LI AA Sbjct: 257 DRILDTLGQQDSVSVYDLPQLISDLREAGFATKQYEVWLQVQLARPLFLVSMVLIG--AA 314 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ 331 VR + ++ + FG+++ ++ E Sbjct: 315 FTMRHVRFGGTGIAVLTAVLLGFGIYFIRNFAQILGEN 352 >gi|254372627|ref|ZP_04988116.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. novicida GA99-3549] gi|151570354|gb|EDN36008.1| permease YjgP/YjgQ family protein [Francisella novicida GA99-3549] Length = 353 Score = 79.2 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 88/205 (42%), Gaps = 11/205 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + YI R + SFL+ + + ++ L +++ +++ + +++ + +P + Sbjct: 3 LNRIDRYIFRTVFSSFLIVSIIFCILFFIFTYLAQVSNNTANVSNFELIIN-TLIQLPGI 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P C + L+ + N+E++++ + G S + K V+ + ++ S+ + Sbjct: 62 LYTLLPACAMVGALMGLSLLANNSEIIVLRSFGRSTAQIAKGVILVGLIGSVTTMVFGGY 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSR 179 I P + + +Y +L+F+ D IS P GI + Sbjct: 122 IAP--------ILQRQVDTNMVTYNTHDLWFKTPDGFM-NISNIEPTQGKAYGIRKFMVQ 172 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILN 204 D + +I YA+S + D A + N Sbjct: 173 DNKVREIRYAESATYINDASANVFN 197 >gi|51599059|ref|YP_073247.1| hypothetical protein BG0833 [Borrelia garinii PBi] gi|51573630|gb|AAU07655.1| conserved hypothetical integral membrane protein [Borrelia garinii PBi] Length = 429 Score = 79.2 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 45/206 (21%), Positives = 85/206 (41%), Gaps = 3/206 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 S+E YI+ + FL++ LF F+ ++ QIL + ++ + Y +P V+ Sbjct: 6 NSYESYIISEFFKYFLITFLFFFFVFFINQILFFMRILLQNYVPFLKAFIFIIYSLPMVI 65 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF + + N E+L + G S LI P L I++ FIS +I+ Sbjct: 66 ALSPPFASLISVILTIHKFKINNEILAFRSIGISIFDLIFPFFKLGIVIVFISFISNDIL 125 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P ++ + + + L+ + DL + + N F ++R Sbjct: 126 LPLGSIGRLKIFNEIKEEVPHLVLKPYS-SKQYGDLIFVSGEKSENGYKNVTFFDNTRLK 184 Query: 182 QTHKIYYAQSGSIDLDRQAI--ILND 205 +I+ A++ I + + ILND Sbjct: 185 GFDRIFMAKNLDIKKENFQVYFILND 210 >gi|298291095|ref|YP_003693034.1| permease YjgP/YjgQ family protein [Starkeya novella DSM 506] gi|296927606|gb|ADH88415.1| permease YjgP/YjgQ family protein [Starkeya novella DSM 506] Length = 361 Score = 79.2 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 56/369 (15%), Positives = 122/369 (33%), Gaps = 34/369 (9%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 ++ +Y R + L + + +I +L+ V L+ + Y +P Sbjct: 4 RTLGVYFGRRFLGAVLGIFVGCAGLIMLIDLLELSRRVGERDVDFGTLMLLVVYRMPFFT 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF +++R EL++ G S I P LA+LL +F N + Sbjct: 64 EQLLPFAVLFGAIGTFLTLSRRLELVVARAAGISAWQFIAPACLLALLLGVFSTTVYNPV 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQ---------- 171 + +L A+ + LF +++ + +Q Sbjct: 124 SADFKDRASRLEAEIFNR------QTGLFAMTTGGFWMRQQSVDGQAIIQAAATSDGGRQ 177 Query: 172 ----GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 +F+ + D T + A ++ + ++ I + ++ +Y Sbjct: 178 LTGVNVFLFGADDKLTER-IEAVRAILEPGAWRL-------EHARVLTPGIGLQEYDAYM 229 Query: 228 LQTE-SANSSTIVLKANDQNLSFLLNPNPNNPNYRPEL-LETYRSEFHKRLTQWLFPVIF 285 L T + N L+++ L P + R E YR ++ L + + + Sbjct: 230 LATNLTPNQVQETLQSDTVPFWQL--PAAIDAATRVGFGAERYRLQYQSLLARPMLLLAM 287 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC 345 LI+ A+ + R I ++ F ++ E + I F Sbjct: 288 VLIA--ASVSLRVFRFGGIGQTILGGVAAGFLLYVSTKLAEDLGEAGIVHPVIAAWFPAV 345 Query: 346 ISSIFLLMI 354 + ++ ++I Sbjct: 346 VGALMGILI 354 >gi|71064627|ref|YP_263354.1| hypothetical protein Psyc_0046 [Psychrobacter arcticus 273-4] gi|71037612|gb|AAZ17920.1| conserved hypothetical protein [Psychrobacter arcticus 273-4] Length = 402 Score = 78.8 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 23/144 (15%), Positives = 55/144 (38%), Gaps = 1/144 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K Y+ + + + + + + V L ++ + + ++ +K Y P Sbjct: 21 LKVLSRYVKLNALLAIIAAVIGLWALQLVFSYLSELDSL-DDSYTMGEAIKYIFYRSPYF 79 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + L + N+EL+++ G S ++ VL A++ + I Sbjct: 80 LEQFIPTGALLGAVIGLGLLANNSELVVMRAAGISVYRIVSWVLQPALIFVVLALIINQF 139 Query: 121 IEPKCRSTIKQLSAKAQLALTFSY 144 + P ++++K +L S Sbjct: 140 VLPHSNQLANEINSKGNSSLVTSV 163 >gi|219684946|ref|ZP_03539887.1| conserved hypothetical integral membrane protein [Borrelia garinii PBr] gi|219671684|gb|EED28740.1| conserved hypothetical integral membrane protein [Borrelia garinii PBr] Length = 429 Score = 78.8 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 85/206 (41%), Gaps = 3/206 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 S+E YI+ + FL++ LF F+ ++ QIL + ++ + Y +P V+ Sbjct: 6 NSYESYIITEFFKYFLITFLFFFFVFFINQILFFMRILLQNYVPFLKAFIFIIYSLPMVI 65 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF + + N E+L + G S LI P L +++ FIS +I+ Sbjct: 66 ALSPPFASLISVILTIHKFKINNEILAFRSIGISIFDLIFPFFKLGVVIVFISFISNDIL 125 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P ++ + + + L+ + DL + + N F ++R Sbjct: 126 LPLGSIGRLKIFNEIKEEVPHLVLKPYS-SKQYGDLIFVSGEKSENGYKNVTFFDNTRLK 184 Query: 182 QTHKIYYAQSGSIDLDRQAI--ILND 205 +I+ A++ I + + ILND Sbjct: 185 GFDRIFMAKNLDIRKENFQVYFILND 210 >gi|86138692|ref|ZP_01057265.1| permease, YjgP/YjgQ family protein [Roseobacter sp. MED193] gi|85824752|gb|EAQ44954.1| permease, YjgP/YjgQ family protein [Roseobacter sp. MED193] Length = 367 Score = 78.8 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 57/358 (15%), Positives = 126/358 (35%), Gaps = 15/358 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 +LY R + F + C ++ + +I + ++I S + ++ ++ P L Sbjct: 2 KLDLYYARRFLQWFAVICGVLMTLVMLIDLNEQIRRFDEFDVSASEIVGLTLLNAPAALS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + T + + R++EL++ G S I + + +A LL I + N I Sbjct: 62 EFLPLIMILTTIVLFVGLARSSELVVTRAIGRSGIRALAAPVLVAGLLGILAVSTLNPIV 121 Query: 123 PKCRSTIKQLSAKAQLALTF--SYLEENLFFR---LDDDLYIKISKYNPNN---TLQGIF 174 + K L+ + S+ E L+ R I S Y + L + Sbjct: 122 AATTNLSKTLADTYRTGGPSALSFSGEGLWLRQGSPSGQSVIHASSYGGGSDNIVLYDVT 181 Query: 175 I-VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGE-VHRKSPISKDISIMKFKSYTLQTES 232 I + + A+S + D + +L+ + H + ++ + S ++ L T Sbjct: 182 ILAYAPQGGPIRQIIAESARL--DGEEWLLHKAKAWHMTAGLNPERSAATHETLRLPTTL 239 Query: 233 ANSSTIVLKANDQNLS-FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 + +S + L + + Y+ + L + LF + L+ Sbjct: 240 TQDRIRDRLGSADGISVYDLPTTIRDLAQAGFSTKRYQVWYQVELARPLFLIAMVLVG-- 297 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 AA R + ++ + FG+++ ++ E + + S + Sbjct: 298 AAFTMRHTRFGGTGLAVLTAVLLGFGLYFVRNFAQILGENGQIPVALAAWAPPVASIL 355 >gi|46446270|ref|YP_007635.1| hypothetical protein pc0636 [Candidatus Protochlamydia amoebophila UWE25] gi|46399911|emb|CAF23360.1| hypothetical protein pc0636 [Candidatus Protochlamydia amoebophila UWE25] Length = 360 Score = 78.8 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 58/368 (15%), Positives = 131/368 (35%), Gaps = 20/368 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNI--LLKISGYLIPT 59 +E Y + + FL+ + + +I + + L I L++ +++ + Sbjct: 4 SIWERYFVSEFIKVFLLFLVCFYGLYVLIDYASHTSALPHHHIQLRIRELIRYYLFILAS 63 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ P + + ++N + EL+ + G TL++P L +A+ L+++E Sbjct: 64 RAEILIPLALLIAFIKTVCTLNTHQELVALMAGGIKLKTLMRPFLMIALAFVCLLYLNEQ 123 Query: 120 IIEPKCRSTIKQLS--AKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD 177 + P ++ L K Q + D L + + + ++ ++ Sbjct: 124 FVLPSTLKKLRHLENATKHQKKRQLPEITVKHVVLEDRSLLLYQNYDSEKEEFFDVYWIE 183 Query: 178 SRDTQTHKIYYAQSGSIDLD---RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 S D+ Y + I + + +GE+ ++ S +FK+ E Sbjct: 184 SIDSIYRAKYLCPNKEIPVGYFVDHLLRQPNGELLQQQA----YSQYEFKNLLFNQELLQ 239 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 S+ +L + L+ L P+ E + F+ +L ++ + A Sbjct: 240 SA--ILDPDILPLTNLFFQQPSLFANLSEKESKIATAFYWKLLMPWLCLLA-----ILAP 292 Query: 295 KRALVRQRKKIHPIFISLSISFGV--FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 + VR ++I FI + FG+ F+ + + PI + L I Sbjct: 293 APSCVRFSRQIPIFFIYIYSLFGLIAFYMLMDAAQVLAKRQVLPPIWAIGLPFILVFSFY 352 Query: 353 MIKKKYTK 360 + K Sbjct: 353 SYRFARLK 360 >gi|170746989|ref|YP_001753249.1| permease YjgP/YjgQ family protein [Methylobacterium radiotolerans JCM 2831] gi|170653511|gb|ACB22566.1| permease YjgP/YjgQ family protein [Methylobacterium radiotolerans JCM 2831] Length = 363 Score = 78.8 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 47/352 (13%), Positives = 109/352 (30%), Gaps = 18/352 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + Y R+ L + + + + + ++ + S ++ ++S Y P V Sbjct: 7 TLGRYFAARFLRTVLGVFVTVFALVYTLDFVELLRRAGEAQGASAGLMAQLSLYRTPAVA 66 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 V PF + L ++R EL++ G S ++P LF+A+ L N + Sbjct: 67 EGVLPFAVLFGSMAALLQLSRKLELVVARAAGISAWQFLQPGLFVALALGALAVGVYNPV 126 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 + +KQ S + + + + DL+I+ + L+ V+ T Sbjct: 127 S----AMLKQRSTEIEAKIFAKSTKA----SSGKDLWIRQKGLDGEAILRAETAVEGTTT 178 Query: 182 QTHKIYYAQSGSIDLDRQAI----ILNDGEVHRKSPI--SKDISIMKFKSYTLQTESANS 235 + + Q + +L+DG + D F +Y + + Sbjct: 179 LAGVSVFTFDAAGKFAEQLVAARAMLHDGYWELSDVRVLTPDAPPESFDTYLIASNLDPG 238 Query: 236 STI-VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + + L YR ++ + + + ++ + A Sbjct: 239 QVRQRFTPPESVPFWQLPTTIARTERAGLDATRYRLQYDVLWARPV--LFVAMVIVAATV 296 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCI 346 R + ++ F ++ + P+ F + Sbjct: 297 SLRFFRFGGVGKLVLGGVAAGFALYVVRQVMEGLGASGLVAAPVAAWFPAVV 348 >gi|254374089|ref|ZP_04989571.1| hypothetical protein FTDG_00250 [Francisella novicida GA99-3548] gi|151571809|gb|EDN37463.1| hypothetical protein FTDG_00250 [Francisella novicida GA99-3548] Length = 353 Score = 78.8 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 86/204 (42%), Gaps = 9/204 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + YI R + SFL+ + + ++ L +++ +++ + +++ + +P + Sbjct: 3 LNRIDRYIFRTVFSSFLIVSIIFCILFFIFTYLAQVSNNTANVSNFELIIN-TLIQLPGI 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P C + L+ + N+E++++ + G S + K V+ + ++ S+ + Sbjct: 62 LYTLLPACAMVGALMGLSLLANNSEIIVLRSFGRSTAQIAKGVILVGLIGSVTTIVFGGY 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + + +Y +L+F+ D + GI +D Sbjct: 122 IAP--------ILQRQVDTNMVTYNTHDLWFKTPDGFMNIANIEPTKGKAYGIRKFMVQD 173 Query: 181 TQTHKIYYAQSGSIDLDRQAIILN 204 + +I YA+S + D A + N Sbjct: 174 NKVREIRYAESATYINDASANVFN 197 >gi|121997476|ref|YP_001002263.1| permease [Halorhodospira halophila SL1] gi|121588881|gb|ABM61461.1| permease YjgP/YjgQ family protein [Halorhodospira halophila SL1] Length = 350 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 38/358 (10%), Positives = 113/358 (31%), Gaps = 10/358 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ Y+ R + + L++ I+ + +V ++ V+ +L + P + Sbjct: 1 MRILTGYLARTVIAASLVALAAILALDFV---FSMVDGVADDGLDTTTMLLKALLGAPAL 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 PF + L + EL + G S + + VL ++L++ + Sbjct: 58 AYEAFPFATLIGALMGLGGLAARQELTAMRAAGVSVVQIAGAVLVGGVILALLATAVGEL 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + ++ + + + D +++ + + L+ + + + Sbjct: 118 VVPPAERQAAAVRGLSEADELRTG-PDGALWARDGRDFLRAERPRSASHLESVTLYRFVE 176 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-DISIMKFKSYTLQTESANSSTIV 239 Q + A + + + +G V + + ++ ++ + +V Sbjct: 177 GQLTERIDADGAHYEDGQWRL---EGVVKTVYADHRLERRELEAWAWQGALSPDVLAVVV 233 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + + L + YR +++ L + L++I Sbjct: 234 ADPSTLPVPEL-WTYIQYLDANELDSGPYRLALWEKVATPLATLAMLLVTIPLVFTAVRS 292 Query: 300 RQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + I + + ++F + P +L + F ++ + + Sbjct: 293 SGAGQRIVIGVLVGVAFFLLNRALGQAGVVYGVPPSLSALLPVVAFAALGLWGTLRVR 350 >gi|149914657|ref|ZP_01903187.1| permease, YjgP/YjgQ family protein [Roseobacter sp. AzwK-3b] gi|149811450|gb|EDM71285.1| permease, YjgP/YjgQ family protein [Roseobacter sp. AzwK-3b] Length = 363 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 59/366 (16%), Positives = 126/366 (34%), Gaps = 29/366 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + LY+ R +FL V + ++I I++ + + + +L+I+ P+ Sbjct: 2 TLHLYLARRFLLTFLAIFSVFVILLFLIDIVKEMQDFPA--FPFSEILEIALLKAPSANY 59 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + T + M+RN+EL+++ +G S I + L +A L+ + N I Sbjct: 60 EILPLIVILATVALFLRMSRNSELVVVRASGRSAIRALVAPLVVAGLIGVVSVTMLNPIV 119 Query: 123 PKCRSTIKQLSAKAQ--LALTFSYLEENLFFR---LDDDLYIKISKYNPN-NTLQG-IFI 175 L + E L+ R I + + + +TL FI Sbjct: 120 AASAKRHNDLMNSYLGWSINIMAIAPEGLWLRQGSETGQTVIHAERASSDVSTLYNTTFI 179 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI-SKDISIMKFKSYTLQTESAN 234 D + A S ++ L D ++ S + + + + SY++ + Sbjct: 180 AFGLDGTPQRRITAASATLGDGE--WRLADAKLWDLSSGINPESTAQELDSYSVPSALTQ 237 Query: 235 SS--TIVLKANDQNLSFL---LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 K ++ L + + ++E L + LF + L+ Sbjct: 238 DRIIDSFGKPEYISIWDLPKFIGQLEESGFSARRYAVWMQTE----LARPLFLI--ALVM 291 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN------PYYIPILYLFL 343 AA R + ++ + FG+ + ++ E + P + FL Sbjct: 292 AAAAFTMRHSRLHNTGVSVLTAIMLGFGLHYIRNFAQILGENGQIPIMLAAWAPPVAAFL 351 Query: 344 FCISSI 349 + + Sbjct: 352 LALGIL 357 >gi|322378344|ref|ZP_08052801.1| Conserved hypothetical integral membrane protein [Helicobacter suis HS1] gi|321149230|gb|EFX43673.1| Conserved hypothetical integral membrane protein [Helicobacter suis HS1] Length = 348 Score = 78.5 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 53/349 (15%), Positives = 125/349 (35%), Gaps = 33/349 (9%) Query: 17 LMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNV 76 + S + ++ IA V +++ S L ++ Y +P + + P F Sbjct: 26 IASMVMLISIASVTLVVKL---------SFLDLAQLYIYSLPGTIFFIIPITFFGACAIG 76 Query: 77 LTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKA 136 L ++ + ELL+ + G + ++K L L I +S+ L I I+ P +S +A Sbjct: 77 LARLSYDHELLVFFSLGIAPKQIVKAFLPLCIFVSLVLLIFSLILIPASKSAYYSFL-RA 135 Query: 137 QLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDL 196 + ++ F + D + + + + + + AQSG I Sbjct: 136 KKDRVDVNIQAGEFGQKLGDWLVYVGHKKKD-IFSNLVLFSHKGLAFESFMIAQSGQIKN 194 Query: 197 DRQ--AIILNDGEVHRKSPISKDISIMKFKSYTL--QTESANSSTIVLKANDQNLSF--- 249 I L G+ + + + F++ L + + + +S+ Sbjct: 195 QEGVFGIELRKGDAY--FADKNQLRKVHFETLNLRNKLAFSAKKDAAYLHSHDYVSYWKK 252 Query: 250 LLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIF 309 P+P+ R R TQ + +F L S+ + R + + Sbjct: 253 AFGPHPDKNQQR-------------RFTQAILVSLFPLASLFLIPLFGIANPRFSKNLSY 299 Query: 310 ISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + + ++ G+++ ++ + I + +++ ++ +I + Y Sbjct: 300 VYVLLAVGLYFLGMHVASQDAPISGTILLPIVWMLGAYGLYRRIIVRFY 348 >gi|89094619|ref|ZP_01167556.1| hypothetical protein MED92_00300 [Oceanospirillum sp. MED92] gi|89081089|gb|EAR60324.1| hypothetical protein MED92_00300 [Oceanospirillum sp. MED92] Length = 362 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 53/368 (14%), Positives = 125/368 (33%), Gaps = 17/368 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI R + FL+ L + + + +++ + V + S ++ +P Sbjct: 1 MSLIDRYIARHVLGGFLVVLLVVAGLDMLFALVEELKDVQGN-YSFAAAVEYVLLTLPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + L + ++EL ++ G S + +I V+ +L+ Sbjct: 60 LYEFIPLSSLIGCLLGLGILASSSELTVMRAAGISTLGIIISVMKPVLLIIALALGLGEF 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI-KISKYNPNNTLQGIFIVD-S 178 + P + + ++ R DD+ I+ P+ +++G+ + + Sbjct: 120 VVPHTEQRAQSHRQVMLTGGGAIHDASRVWHR--DDMTFLHINAVIPDGSVRGVTRYEFN 177 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST- 237 D + +A+ G + + +L D + R T + E + Sbjct: 178 EDLTLKRSSFAEVGRYEDGK--WLLTDIQESRFPDAKGREQRATSSIVTTEIEQEIWESG 235 Query: 238 --------IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 ++++ + ++S L+ N + E YR F +L L L++ Sbjct: 236 LTPDLLKVVMVQPTNLSISGLV-QYSNYLTDQGLASEQYRIAFWNKLLLPLAIFALVLVA 294 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 + + I + + F + + ++ ++ L CI Sbjct: 295 VSFIFGPLRSVTLGQRLITGIIVGLVFKLSQDILGPTSAVFGFYPFVAVMIPILICIGVG 354 Query: 350 FLLMIKKK 357 F L+ + K Sbjct: 355 FWLLNRAK 362 >gi|302338546|ref|YP_003803752.1| permease YjgP/YjgQ family protein [Spirochaeta smaragdinae DSM 11293] gi|301635731|gb|ADK81158.1| permease YjgP/YjgQ family protein [Spirochaeta smaragdinae DSM 11293] Length = 360 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 61/332 (18%), Positives = 122/332 (36%), Gaps = 12/332 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK +L +LR +S +F F+ ++++ + + +L +L S P Sbjct: 1 MKKLDLMVLRAFFHILFLSLMFFSFVVVLVELFSNLWRYLQNDAALAEILFTSLLYYPKA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P L S N ELL + ++G S + P++ L+ LLS+ + + Sbjct: 61 ITLALPPSILFAIAFTLGSYQANNELLALFSSGVSLLRFTVPIIVLSALLSVGSYFFQEY 120 Query: 121 IE-PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIK-ISKYNPNNT-LQGIFIVD 177 + PK KQ+ + N+ + ++ I YN N L G+ ++ Sbjct: 121 LVIPKS--AQKQILTDRLSGRSSVGNNNNVVILSGEGRFLYKIDYYNAKNRSLTGVSVL- 177 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 RD+Q + +S D + + K ++ F +Y S + S+ Sbjct: 178 IRDSQGNFTKRIESEWAQCDESGEWVFHRVRLFEVLSDKRVTEQFFLTYRNPELSESPSS 237 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEF---HKRLTQWLFPVIFGLISIVAAD 294 + N R E Y E ++R + L P+I L+SI + Sbjct: 238 FRKQIGSVNELQRKEAQVWIERLRKSGSERYHKELTAYYERFSFSLTPLIVALLSISLSG 297 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYII 326 ++ + + S+ +S + ++ Sbjct: 298 ---YFKKNILLMSLLSSVIVSVLYYVSEMVLV 326 >gi|315636695|ref|ZP_07891925.1| conserved hypothetical protein [Arcobacter butzleri JV22] gi|315479010|gb|EFU69713.1| conserved hypothetical protein [Arcobacter butzleri JV22] Length = 338 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 56/339 (16%), Positives = 126/339 (37%), Gaps = 17/339 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y+ + +F + FI VI +++ L + T + L +I Y IP ++ Sbjct: 2 KLQRYLYSQLAITFFPIFFGLFFITAVIFLVKISALTAIITVNFFELFRIFSYTIPDIIF 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P F + L+ ++ EL +I + G + ++K L L +LL++ L + + Sbjct: 62 YTMPISFFISMVITLSKLSSEYELTVITSFGLNPFKILKIFLPLTLLLTLLLLVVSVGLI 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 PK KQ + ++ F + D I I+ NN + + ++ ++ Sbjct: 122 PKTDFERKQFV-NIKKNEANFNIKSGEFGQKFGDWLIFINDK-KNNLYEDVKLLKVQNDN 179 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + +++ +D D+ + + E ++ + + +++ + +++ T V Sbjct: 180 DQFVI-SKNAVLDNDKGVLSIRLAEGKAFLIEKEEFNQINYEAMYINDSISSAKTTVF-- 236 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 ++ + + L + + FP++ + I R Sbjct: 237 ---TTTYDYWKDNIKNKVDLDDLTFF-------ILTSFFPLMSLFLVITFG--YFNPRYE 284 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL 341 K ++ +SI S Y IPIL+L Sbjct: 285 KNRAIMYSLISIVLYYVLIKSIGDKIFLHTLYIIPILWL 323 >gi|163735796|ref|ZP_02143225.1| permease YjgP/YjgQ family, putative [Roseobacter litoralis Och 149] gi|161390882|gb|EDQ15222.1| permease YjgP/YjgQ family, putative [Roseobacter litoralis Och 149] Length = 365 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 121/358 (33%), Gaps = 12/358 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 LY R +++ + + + ++ ++ + + S + ++ P + Sbjct: 2 ILHLYFARRFASWLMIAFIALFALIALVDLVDQTRRFADRGVSAAGIFELVILNTPQTIS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRI-TLIKPVLFLAILLSIFLFISENII 121 + P + T S+ R++EL+ +G S + LI PV + +L ++ I+ Sbjct: 62 QILPLIVLLATVAFFLSLARSSELIATRASGRSAMGALIAPVGVVIVLGTLATTTLNPIV 121 Query: 122 EPKCRSTIK-QLSAKAQLALTFSYLEENLFFR---LDDDLYIKISKYNPN-NTLQGI-FI 175 + + + + TFS E L+ R D + I+ + NP+ + L + F+ Sbjct: 122 AATSKKYNELSQTYRTGGGSTFSISTEGLWLRQGTDDGQMVIRAWRSNPDASVLFDVTFL 181 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAII-LNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + +A S + + + D + R + + + + Sbjct: 182 AYEVIGTPVRRIHADSAELKDGAWLLRNVKDWPLARGINSEGNATEHRSLTIPSSLTVER 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + ++ +N N +R L + LF V LI+ +A Sbjct: 242 IRESFGHPSTISIWE-MNDFIKQLNQAGFSSLQHRVWLQSELARPLFLVAMVLIA--SAF 298 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFL 351 R + ++ + F +++ S+ + E + + + + Sbjct: 299 TMRHTRFGGTGVAVLAAVLLGFALYFVRSFGLILGENGQLPVYLAAWAPPIASVLLAF 356 >gi|254460215|ref|ZP_05073631.1| permease, YjgP/YjgQ family [Rhodobacterales bacterium HTCC2083] gi|206676804|gb|EDZ41291.1| permease, YjgP/YjgQ family [Rhodobacteraceae bacterium HTCC2083] Length = 365 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 52/358 (14%), Positives = 125/358 (34%), Gaps = 18/358 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y R R FL + L + +I +++++ S S + ++ ++ + P + Sbjct: 2 ILHFYFARRFFRVFLTTLLIFLAFLTLIDLVEQMRRFDSKDVSFSDIVFLTLFNAPGAIY 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + ++ ++ R +EL++ + G S + + + +A ++ I N I Sbjct: 62 QILPLVMILSAVSLFLTLARTSELVVTRSAGRSALVTLASPMCVAAVIGITTVTLFNPIV 121 Query: 123 PKCRSTIKQLSAK--AQLALTFSYLEENLFFRLDD---DLYIKISKYNPN-NTLQGI-FI 175 L + +Q T S + L+ R D I + + TL F+ Sbjct: 122 ASTTRQYITLEQEYKSQKKNTVSIGRDGLWLRQGDENGQTVIHALSTSDDMRTLFDARFL 181 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA-- 233 + D+Q A + +I + + + + + L T Sbjct: 182 QYNTDSQPKTRIIADEARLTNTGWQLIRAK-HWSLDTSGNPEETAREIDVLMLPTTLTIE 240 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHK--RLTQWLFPVIFGLISIV 291 N + ++ + + T R + + + LF + L+ Sbjct: 241 NIRDSFSEPAAISIWEM---DAYIEGLEEAGFSTRRHKVWQQMEFARPLFLMAMVLVG-- 295 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 A+ R K + ++ + FG+++ ++ + +N ++ + I+SI Sbjct: 296 ASFTMRHTRFGKAGVAVLAAIMMGFGLYYVRNF-AQILGENGQLPTMIAAWTPPIASI 352 >gi|84516314|ref|ZP_01003674.1| permease, YjgP/YjgQ family [Loktanella vestfoldensis SKA53] gi|84510010|gb|EAQ06467.1| permease, YjgP/YjgQ family [Loktanella vestfoldensis SKA53] Length = 364 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 50/338 (14%), Positives = 116/338 (34%), Gaps = 14/338 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y R +FL I + ++++ +S+ L LL ++ IP + Sbjct: 2 ILHRYFARRFLMTFLGVLAVFFLIMLFLDLVEQSRRYASAEAGLRDLLTLTLLNIPRAIY 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + + + R++EL++ G S + I L + +L+ I N I Sbjct: 62 EILPLIMILAAIGLFLGLARSSELVVTRAAGRSALRAILAPLAVGLLIGIVAVAVLNPIV 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYL-EENLFFR---LDDDLYIKISKYNPNNT-LQGI-FIV 176 + + + + L+ R D+ I+ + N + T L + F+ Sbjct: 122 AATSKEYEARGGALRGNASALSIGSSGLWLRQGASDEQTVIRAAGANLDGTVLTDVTFLT 181 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + D + A S + A +L + +V + T++ S + Sbjct: 182 FTPDVGPARRVNAASAVL--TDGAWVLRNAKVWTFG-GTLTPEAGAVTQATMRIASTLTP 238 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPEL---LETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + + S + P + E + + H + Q +F + +I A+ Sbjct: 239 DQIRDSFGTPSSIPIWQLPAFIDRLREAGFSAQRHLVWLHSEIAQPVFLMAMVMIG--AS 296 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ 331 R + + ++ ++F +++ ++ E Sbjct: 297 FTIRHQRGGRTGLAVMTAILLAFVIYFIRNFAQVLGEN 334 >gi|328948913|ref|YP_004366250.1| permease YjgP/YjgQ family protein [Treponema succinifaciens DSM 2489] gi|328449237|gb|AEB14953.1| permease YjgP/YjgQ family protein [Treponema succinifaciens DSM 2489] Length = 356 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 43/218 (19%), Positives = 81/218 (37%), Gaps = 7/218 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+L+ F+ + +F V + + + + S S + I Y IP Sbjct: 1 MKLV-FYMLKRFFPVFIGAVMFFVLVLCLTDLFMNLWNYISKNVSSRDVALILIYYIPKA 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P T +L+ ELL + +G S P+L +A+ +S LFI E+ Sbjct: 60 VWYAVPIAMLFATAYMLSDFYARNELLAVFASGISLFKFSVPLLTVAVAMSFALFIFEDN 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKY--NPNNTLQGIFI-VD 177 I S QL L+ S + + I + + N +L +++ Sbjct: 120 IVVPSFSKKTQLQESV-LSKEKSLNNSKIVIMAEGGNVIYKADFFNNKAESLSKLYVLFR 178 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPIS 215 + D + + YAQ + + L + ++ + Sbjct: 179 TEDKKPDAVVYAQKAFWKNN--SWKLENAVEYKFQDEN 214 >gi|85374866|ref|YP_458928.1| permease [Erythrobacter litoralis HTCC2594] gi|84787949|gb|ABC64131.1| predicted permease [Erythrobacter litoralis HTCC2594] Length = 365 Score = 77.7 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 55/326 (16%), Positives = 118/326 (36%), Gaps = 15/326 (4%) Query: 37 NLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSR 96 +++ LL +G +P ++ P+ + T L ++N+N+E++ + G S Sbjct: 45 EILAVEGNGQGELLTYAGLRVPQLVQRFLPYSVLLATIITLIALNQNSEVIAMKAAGLSA 104 Query: 97 ITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSA-KAQLALTFSYLEENLFFRLDD 155 ++ P+L A L+++ F + + +T+K A + S ++ N++ Sbjct: 105 HQVLAPLLLTAGLVALVSFGFNERVVTRATATLKAWEATEFGAVPPDSDVKANVYITDGT 164 Query: 156 DLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAI--ILNDGEVHRKSP 213 ++ + D R A +G I +A+ D ++P Sbjct: 165 NI-LTARTVAGTG-------ADIRLGDVTWYRRAPTGQIAEQVRAVSASFVDPGWQLENP 216 Query: 214 ISKDISI--MKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYR--PELLETYR 269 S DI+ + E + I L+A D + +Y R Sbjct: 217 QSFDITTANTTTSEAMVVGEGLTPAQIELEAIDPDAVPFWRLGSAIDSYEAIGRRTAELR 276 Query: 270 SEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI 329 +++ +L+ L + L+ VAA A Q I + L ++ V + + Sbjct: 277 AKWWHKLSGPLSAFLMPLLGAVAAFGLARSGQLFIRAVIGMGLGFAYFVVDNAALAMGSF 336 Query: 330 EQNPYYIPILYLFLFCISSIFLLMIK 355 P ++ FL + ++I+ Sbjct: 337 GGYPPFLAAWAPFLLFLLVGETVLIR 362 >gi|93004885|ref|YP_579322.1| permease YjgP/YjgQ [Psychrobacter cryohalolentis K5] gi|92392563|gb|ABE73838.1| permease YjgP/YjgQ [Psychrobacter cryohalolentis K5] Length = 408 Score = 77.7 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 20/144 (13%), Positives = 54/144 (37%), Gaps = 1/144 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K Y+ + + + + + + V L ++ + + ++ ++ Y P Sbjct: 27 LKVLSRYVKLNALLAIIAAVIGLWALQLVFSYLSELDSL-DGSYTMGEAIRYIFYRSPYF 85 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + L + N+EL+++ G S ++ VL A++ + Sbjct: 86 LEQFIPTGALLGAVVGLGLLANNSELVVMRAAGISVYRIVSWVLQPAMIFVVLALFINQF 145 Query: 121 IEPKCRSTIKQLSAKAQLALTFSY 144 + P +++++ +L S Sbjct: 146 VLPYSNQLANEINSEDNSSLVTSV 169 >gi|56697305|ref|YP_167671.1| YjgP/YjgQ family permease [Ruegeria pomeroyi DSS-3] gi|56679042|gb|AAV95708.1| permease, YjgP/YjgQ family [Ruegeria pomeroyi DSS-3] Length = 365 Score = 77.7 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 50/362 (13%), Positives = 126/362 (34%), Gaps = 14/362 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y R +SFL+ L + + +I +++++ S+ L+ ++ P + Sbjct: 2 ILDRYFARRFIQSFLVIGLVFLGLVLLIDLIEQLRRFEGFEVSMGQLVGLTLLNAPAAIS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + T + + R++EL++ G S I + + +A+++ + + N I Sbjct: 62 EILPLLMILSTIVLFVGLARSSELVVTRAIGRSGIRALVGPVLVALVIGLLAVTTLNPIV 121 Query: 123 PKCRSTIKQLSAKAQLALTF--SYLEENLFFRLDD---DLYIKISKYNPNN-TLQGIFI- 175 + L+ + S +E L+ R D I + + + TL + I Sbjct: 122 AATAVRYQTLADTYRNGGPSVLSLSDEGLWLRQGDAGGQSVIHATGFGGDGVTLFDVTIL 181 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVH-RKSPISKDISIMKFKSYTLQTESAN 234 + D + A+S + + +L +V K + + + + + T Sbjct: 182 SYAPDGSAQRRTIAESAQLQDGK--WLLQKAKVWPLKVGQNPEANAVYHDRIEMPTSLTQ 239 Query: 235 SSTIVLKANDQNLS-FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + +S + L + ++ L + LF V L+ AA Sbjct: 240 ERIRDSLGRRETVSIYDLPQTIEQLQQAGFSTKRHKVWLQVELARPLFLVSMVLVG--AA 297 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFLL 352 R + ++ + F +++ ++ E + + + + Sbjct: 298 FTMRHTRFGGTGLAVLSAVLLGFTLYFTRNFAQILGENGQIPVALAAWAPPVAAIMLTFG 357 Query: 353 MI 354 ++ Sbjct: 358 LL 359 >gi|297250819|ref|ZP_06934296.1| permease, YjgP/YjgQ family [Neisseria polysaccharea ATCC 43768] gi|296837907|gb|EFH21845.1| permease, YjgP/YjgQ family [Neisseria polysaccharea ATCC 43768] Length = 181 Score = 77.7 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 24/154 (15%), Positives = 54/154 (35%), Gaps = 5/154 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +I+ + + + + L + +P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEIINEVGNLGKGSYNGAKLGQYVLMQMPAH 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + +EL +I +G S L+ + ++ +I Sbjct: 61 AYELMPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLILSQFGLIFAIATAALGEW 120 Query: 121 IEPKCRSTIKQLSA-----KAQLALTFSYLEENL 149 I P + + A K T +L+E Sbjct: 121 IAPALSQKAENIKAAAINGKISAGNTGLWLKEKT 154 >gi|255613816|ref|XP_002539536.1| Inner membrane protein yjgQ, putative [Ricinus communis] gi|223505146|gb|EEF22847.1| Inner membrane protein yjgQ, putative [Ricinus communis] Length = 283 Score = 77.7 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 42/286 (14%), Positives = 106/286 (37%), Gaps = 10/286 (3%) Query: 80 MNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLA 139 M ++EL+++ +G S T+ K +L + ++ ++ F+ II P +++ +A + Sbjct: 1 MASSSELIVMRTSGISLQTIAKMLLSIGLVFALVTFLIGEIIAPISEKMAQRIRIQATDS 60 Query: 140 LTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SRDTQTHKIYYAQSGSIDLDR 198 + + L+ + D ++ ++ P+ +L I I D + I +A G + D Sbjct: 61 VVAQDFQSGLWIK-DGSSFVNVATVMPDTSLVDIRIYDFDAQFRLRNISHADKGYFEDDH 119 Query: 199 QAI--ILNDGEVHRKSPISKDISIMKFKSYTL-QTESANSSTIVLKANDQNLSFLLNPNP 255 + + KS + ++ FK ++L ++ ++ L Sbjct: 120 WILSNVTQTKMHTSKSAQNNSVTSQFFKQTKWESLIRPELLNVLLVLPEKMSAWNLYSFI 179 Query: 256 NNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSIS 315 + + Y+ +L L ++ ++++ R IF + + Sbjct: 180 QYLHQNGQRSTRYQVALWSKLVYPLACLVMVMLALPFGFL--QQRAGGISAKIFAGIFLG 237 Query: 316 FGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 F ++ + +P I LF + + +L ++ Sbjct: 238 VVYQIMNRVFVHLGVLNDWSPLVSAISPTLLFLAAGLGMLYYVERR 283 >gi|331007486|ref|ZP_08330657.1| putative permease [gamma proteobacterium IMCC1989] gi|330418710|gb|EGG93205.1| putative permease [gamma proteobacterium IMCC1989] Length = 362 Score = 77.7 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 54/364 (14%), Positives = 117/364 (32%), Gaps = 10/364 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ YI R S L+ L I + + +++ + ++ + + L IP+ Sbjct: 1 MRLLNAYIFRTTVVSILVVLLVITALDILAKLIDELGNLTPA-YTFAEALIYVVLAIPSS 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 PF + L S+ +EL+++ G S + L VL + + + Sbjct: 60 FYQYMPFAGLVGGLVGLGSLASTSELVVMRAAGVSLLRLTWAVLKPVLWFIAAMLVFAEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + + + + L++ + N L G+ D Sbjct: 120 VIPVSDQYAESRRSALLQGGNTALSAKGGVWNREGTLFMHFNSVQANGKLLGVTRYQYDD 179 Query: 181 TQT-HKIYYAQSGSIDLDR----QAIILNDGEVHRKSPISKDISIMKFKSYTLQTE-SAN 234 Q +A++ D + + S I+ + S QTE S N Sbjct: 180 KQRLTLASFAETALYTADGWREENVVETRFLDAQSSSDKEALITTATYPSRPWQTELSPN 239 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWL--FPVIFGLISIVA 292 TI+++ D L + Y + ++ Q L ++ IS + Sbjct: 240 LLTILVQDTDNLAITKLYDYAQYLEKQNLDNGKYLLAYWGKVLQPLVIISLVLVAISFIF 299 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 R + + + + + + +P + +L + +FLL Sbjct: 300 GPLREVTMGYRIFTGVVVGIVFQLTQKLLGPASL-LYGISPLFAVLLPILFCFGVGLFLL 358 Query: 353 MIKK 356 + Sbjct: 359 ARTR 362 >gi|149371725|ref|ZP_01891141.1| hypothetical protein SCB49_09980 [unidentified eubacterium SCB49] gi|149355352|gb|EDM43912.1| hypothetical protein SCB49_09980 [unidentified eubacterium SCB49] Length = 338 Score = 77.3 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 49/343 (14%), Positives = 119/343 (34%), Gaps = 10/343 (2%) Query: 20 CLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTS 79 L + I + + ++I+ + + N + ++ P + + Sbjct: 1 MLLFIPIGITVHLAEKIDKILDNEVPFNAVAIYFLEFTVYFANLLFPLFLFLSVIWFTSK 60 Query: 80 MNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLA 139 + NTE++ ++G S ++P + A ++ + + P + + + K + Sbjct: 61 LANNTEVIAFLSSGVSYYRFLRPFMIGATIIFVLGLGLTLYLAPLASTGYNEFTYKYLVR 120 Query: 140 LTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDR 198 + N+F +++D+ YI +S +N +N+ + + + A + Sbjct: 121 KKDRD-KGNIFRQINDNDYIYVSYFNTLDNSGSHFTLEHFEEEKLVYKISANRIRYNEKD 179 Query: 199 QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNP 258 L + + T + + + + A N S L + Sbjct: 180 STYTLQSYKKRTIGVNDDILESRASLDTTFSFKLEDLTPVKYIAETLNYSKLNSYIEQEK 239 Query: 259 NYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGV 318 + Y E +KR + I +I++ ++ R+ + I + I + Sbjct: 240 ERGSSYINRYVLEKYKRFSIPFSVFILTIIAVSV---SSVKRRGGMGANLAIGIGIGM-I 295 Query: 319 FWGFSYIIHKIEQNPYYIPILYLFL----FCISSIFLLMIKKK 357 F F I + Q + P++ + F I +I+LL K+ Sbjct: 296 FVFFDKIFGTLAQQSDFSPLVATWFPNVIFAILAIYLLRNAKR 338 >gi|110634109|ref|YP_674317.1| permease YjgP/YjgQ [Mesorhizobium sp. BNC1] gi|110285093|gb|ABG63152.1| permease YjgP/YjgQ [Chelativorans sp. BNC1] Length = 359 Score = 77.3 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 47/354 (13%), Positives = 113/354 (31%), Gaps = 15/354 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + Y R + + + + +++ + + + L ++ +P ++ Sbjct: 5 TLGRYFFRRYAVITAWNFIGVAALVYIVTFTEITGRAGDLEGFTTSWALGLAALQLPIIM 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PF + L S+NR EL+I G S + P+ F A + + + N I Sbjct: 65 QQAVPFIGLVAAIATLISLNRKYELVIARAAGISAWQFLTPIAFGAFVFGLLTVLVLNPI 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD--LYIKISKYNPNNT--LQGIFIVD 177 + ++ + L A + A T + +E + D I T ++ +F + Sbjct: 125 AARAFASAQMLEATVRGADTSNNAKERWIKQRTDQGETIIGADAALAGGTELVRPVFFII 184 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 D ++ A S + L D + + I+ + Sbjct: 185 GDDRIAERL-DAASAFLRDG--YWELVDVVRRQGGNAPEKIAT---ARVPTNLKPEFVGQ 238 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + ++ L + + + H +T P++ + I A Sbjct: 239 ELTDPDAVSIFALPGM-IETAHSFGLRANAFAMQLHSLITLP--PLLVAMTLIAATVSMR 295 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 R + I + F ++ S ++ + P + + + ++F Sbjct: 296 FTRMGQSATVILGGVVAGFLLYVS-SVLVRAFGDAGFVPPPIAAWTPVMVAMFF 348 >gi|224418390|ref|ZP_03656396.1| permease [Helicobacter canadensis MIT 98-5491] gi|253827708|ref|ZP_04870593.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|313141921|ref|ZP_07804114.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|253511114|gb|EES89773.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|313130952|gb|EFR48569.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] Length = 355 Score = 77.3 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 55/370 (14%), Positives = 130/370 (35%), Gaps = 35/370 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F YI+ + F + + + +I +++ ++ + +S N+++ + Y Sbjct: 1 MTLFSRYIISLYLKYFFILFVSLECFFVLIDLVKYLDELP---QSANLIVLLIFYDFVYA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + SM RN++ G S+ + P+ ++ L+++ + Sbjct: 58 SNFILPLSLVLAQIVLSISMLRNSQFTAFLALGYSKARIFLPIFIVSFLITLLFVLLN-- 115 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTL-QGIFIVDSR 179 P + + + L + +LF + +++ YI K P + + + + + Sbjct: 116 ATPFAYAKERVDLIIERGYLGSY--KNDLFIKYNEN-YIYFEKIFPLLKMAENVKVYEVF 172 Query: 180 DTQTHKIYYAQSGSIDLDRQAII----------LNDGEVHRKSPISKDISIMK-FKSYTL 228 + Q KI A + D+ + L G+ K K ++ FK L Sbjct: 173 NKQVIKIIEAPKATFIEDKWKLEDARITTLDSNLEVGKNPLKIEEQKTYETLEGFKPKIL 232 Query: 229 QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 ++ + + + L N R L FP L+ Sbjct: 233 DNIYEKQGSVSIVDALEAIWLLKKQGVNTQKLRSSLY-----------ALIFFPFFAPLV 281 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP----ILYLFLF 344 + A + I I + + + + WG + ++ + + P IL + + Sbjct: 282 MVCLARFTPNSNRYANIGGITLGMILGVLIVWGVFFSFSRLSMSGFLPPEVSIILPIGIL 341 Query: 345 CISSIFLLMI 354 + S++L + Sbjct: 342 GLVSLWLFLR 351 >gi|330994315|ref|ZP_08318243.1| Lipopolysaccharide export system permease protein lptG [Gluconacetobacter sp. SXCC-1] gi|329758782|gb|EGG75298.1| Lipopolysaccharide export system permease protein lptG [Gluconacetobacter sp. SXCC-1] Length = 369 Score = 77.3 bits (189), Expect = 4e-12, Method: Composition-based stats. Identities = 56/368 (15%), Positives = 119/368 (32%), Gaps = 37/368 (10%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y+ R + + + +V + ++ +L+++ + L +L + +P + P Sbjct: 16 YLSREMMGKVFATAVIVVSLMEILSLLEQVTEIMHRHLGLTGVLYYAVMRLPLLFCNAMP 75 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + L M + E+ I+ G S LIK L I L I + + + P+ Sbjct: 76 IAVLIGALLALVQMTTSNEIAIMRAAGLSTPGLIKLFLPTTIALGILCGLVNDQVTPRTE 135 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNNTLQGIFIVDS-RDTQTH 184 + Q N + R +DL I + L + + R + Sbjct: 136 QALAQWWNVTTPGAIAEA--HNYWVRSGNDLISIHFLGSGAS-VLGDVTVYHRDRQSLLQ 192 Query: 185 KIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAND 244 K+ + H ++ +S++ L + +I L D Sbjct: 193 KVTTLDTARYVHG-----------HWYGTPTRMLSVISPTRIDL-LDVPPGQSIRLDWPD 240 Query: 245 ---------------QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 Q++S +L+ + + +E R+ L + L++ Sbjct: 241 TLTPGYITQLTISFTQSISTMLD-EEAGRLPSSQSPSFFLTEILGRIMLPLTFTVMLLLA 299 Query: 290 IVAA--DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCIS 347 + RA +R + + L F VF G + P + I L I Sbjct: 300 VPVVYIPPRAGIRSWLPVWCLGAGL--LFVVFQGLLRALGNAGTLPSLMAIFVGILIFIL 357 Query: 348 SIFLLMIK 355 + ++++ Sbjct: 358 GVITVLLR 365 >gi|323137698|ref|ZP_08072774.1| permease YjgP/YjgQ family protein [Methylocystis sp. ATCC 49242] gi|322396995|gb|EFX99520.1| permease YjgP/YjgQ family protein [Methylocystis sp. ATCC 49242] Length = 361 Score = 77.3 bits (189), Expect = 4e-12, Method: Composition-based stats. Identities = 43/330 (13%), Positives = 105/330 (31%), Gaps = 16/330 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTES-LNILLKISGYLIPTVL 61 + Y R+ L I + +V+ ++ + S + ++ ++ ++ +P Sbjct: 5 TITRYFAWRFMRTILAIFFTIFCLMFVVVFVEMLRRASDNPQAGAGMVALMTAMKVPAAA 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M+ PF + + R EL++ G S I P + A+L+ +F N + Sbjct: 65 EMILPFAVLFGSMATFVDLTRKLELIVARAAGMSVWQFITPPVLTALLIGVFSVAVYNPL 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLF--FRLDDDLYIKISKYNPNNTLQGIFIV--- 176 + Q+ + ++ ++ D L + + + F+ Sbjct: 125 SASMKQRSDQMELELFGVPGSLRIDHGVWLRQHGVDGLAVMHAMGTAKGGTELTFVSVNI 184 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE-SANS 235 S + + AQS + + + +G + SY L T+ + Sbjct: 185 YSPNGGFLERVEAQSARL---EPGVWVLNGAIVSAPGEPARP----VASYMLATDLTPEQ 237 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + + L YR +F L + L ++ ++ + A+ Sbjct: 238 AAAATTPPQGTPFWELPEMTARTTEAGLDSTGYRLQFQTLLARPL--LLVAMVLVAASFS 295 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYI 325 R + ++ F ++ + Sbjct: 296 LRFFRFGGVAKTLSGGVAAGFVLYIVTKVL 325 >gi|296115280|ref|ZP_06833920.1| permease YjgP/YjgQ family protein [Gluconacetobacter hansenii ATCC 23769] gi|295978183|gb|EFG84921.1| permease YjgP/YjgQ family protein [Gluconacetobacter hansenii ATCC 23769] Length = 372 Score = 77.3 bits (189), Expect = 4e-12, Method: Composition-based stats. Identities = 46/356 (12%), Positives = 121/356 (33%), Gaps = 13/356 (3%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y+ R + ++ I+ + V+ +L+ + + S L+ +L + +P + P Sbjct: 19 YLTRELLSKIFITAAVIIALMEVLALLEEVTEIMSRHLGLSGVLYYAVIRLPLLFGNAMP 78 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + L + + E+ I+ G S L + L + L + + ++ + P+ Sbjct: 79 LAVLIGALITLVQLTSSNEISIMRAAGLSTAGLFRLFLPAVLGLGVLCVVVDDQVAPRSE 138 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLY-IKISKYNPNN-TLQGIFIVDSRDTQT- 183 + + + F + + I L + + D Sbjct: 139 IAQARW-WNSTAPAPNGVTRDVWFRT---GMTLVNIGGVAHGGRELHDVTVYRRDDEGAL 194 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 K+ + + ++R + + + +D+++ TL A + ++L+ + Sbjct: 195 QKVIHLPTVRYFINRWSGVPDHALTVLSPTRVEDVALQDDTRLTLDWPRALTPDVLLQMS 254 Query: 244 DQNLSFLLNPNP--NNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA--DKRALV 299 + ++ +N + + +E R+ L + L++I RA Sbjct: 255 ENTPLSIMTMVRVLHNAFPSSQSPAFFMTEILGRIMLPLTFTVMLLLAIPVVYIPPRAGA 314 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 R + + L F VF G + P + + + I + ++++ Sbjct: 315 RSWLPVWCLGAGLV--FVVFQGLLRALGNAGTLPSVVAVFVGIVIFILGVVTVLLR 368 >gi|310816138|ref|YP_003964102.1| putative permease [Ketogulonicigenium vulgare Y25] gi|308754873|gb|ADO42802.1| putative permease [Ketogulonicigenium vulgare Y25] Length = 360 Score = 76.9 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 48/361 (13%), Positives = 130/361 (36%), Gaps = 25/361 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y ++FL + + +I++++++ +S ++ +P L Sbjct: 2 ILHRYFALRYFKAFLGTAAGFFLMLVMIELIEQLRRF--GGQS--DFPALTLLNVPATLY 57 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS-RITLIKPVLFLAILLSIFLFISENII 121 V P + + + R++E+++ G S I LI PVL + ++ + + I+ Sbjct: 58 QVLPLIVIISALVLFLGLARSSEMVVTRAAGRSALIALIAPVLIVMLMGLLAVMAFNPIV 117 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD---DLYIKISKYNPNN-TLQGI-FIV 176 R +++ + + ++ R D I+ + +P+ TL+G+ + Sbjct: 118 ASTSREYDNRIATITGSSRILQIGGDAIWLRQGDEDGQSVIRAAASDPDGTTLRGVTMLS 177 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI-SKDISIMKFKSYTL--QTESA 233 + D + A + ++ D + + +V + + + S + + Sbjct: 178 YTNDGIPARRIDAAAATLSGDH--WQMQNAKVWPLNTGQNPEASATIHATLAVPSNLSPD 235 Query: 234 NSSTIVLKANDQNLSFL---LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 ++ L + + + +SE L + ++ I Sbjct: 236 EIRNSFGNPASISVWELPAFIKRMEDAGFTAQRQIVHLQSEL------ALPAFLVAMMLI 289 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 A R + + ++ ISF +++ + + + +N P+L ++ +++I Sbjct: 290 AAVFTLRHQRGGRTGMMVLFAVLISFSLYFIRN-LAQILGENGQLTPLLAAWVTPLAAIA 348 Query: 351 L 351 L Sbjct: 349 L 349 >gi|319778586|ref|YP_004129499.1| Permease-like protein [Taylorella equigenitalis MCE9] gi|317108610|gb|ADU91356.1| Permease-like protein [Taylorella equigenitalis MCE9] Length = 384 Score = 76.9 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 51/381 (13%), Positives = 142/381 (37%), Gaps = 31/381 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ + I R+ + + ++ + + ++ + + + ++ ++L + + +PT Sbjct: 1 MKTARKLLSHEIYRTCSLVLVVLLGLFTFFETIEEFDKI-NEIYTVWVMLALQAFQLPTR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + + L ++ + EL+I+ +G S L+ + ++A+ + + + + Sbjct: 60 LYDILPIGLLIGSVVALANLAQRNELVILRVSGLSSRKLLFMLWWIALPIIVLATLLSEV 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKI---SKYNPNNTLQG--IFI 175 I P + ++ + F ++ + + ++ +F Sbjct: 120 ITPWADQKVSAINMAVLGKKSNQLNSGYWFREPVSSNTYRVINLTNLKNDGEIENIKVFE 179 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAI--------------ILNDGEVHRKSPISKDISIM 221 S D Q ++ A++G+++ + + ILND P+ K + Sbjct: 180 YSSIDNQFKRLLSAETGTLENNELELTNVVQTVSLVDINKILND----EHDPVLKVSNSN 235 Query: 222 KFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELL-ETYRSEFHKRLTQWL 280 K + L+T + + +S L + + +L + ++L+ Sbjct: 236 KLEKIKLKTSLTQDRLLATELKPDRMSTLKLLDYIDYLKENQLEHNKHVVALWRKLSYPF 295 Query: 281 FPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH--KIEQNPYYIPI 338 ++ +I++ R+ IFI + + F ++ + + P +I Sbjct: 296 ALIV--MITLATPLGFIQTRKGGVGAKIFIGILLGIVFFMVNQLSLNMGMLSKLPAWITA 353 Query: 339 LYLFLFC--ISSIFLLMIKKK 357 + ++ L MI++K Sbjct: 354 TLPNIIAMILAIYALYMIERK 374 >gi|126728788|ref|ZP_01744603.1| permease, YjgP/YjgQ family protein [Sagittula stellata E-37] gi|126710718|gb|EBA09769.1| permease, YjgP/YjgQ family protein [Sagittula stellata E-37] Length = 364 Score = 76.9 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 57/364 (15%), Positives = 129/364 (35%), Gaps = 23/364 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y R FL ++ ++ + + S L++ +P L Sbjct: 2 TLHFYYARRFLSLFLGIFAVFALFQGLLDLIDELRQL-GDEVSFGETLQLVILKLPEGLY 60 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS-RITLIKPVLFLAILLSIFLFISENII 121 + P + T + + R++EL+ G S L+ P ++ +I + + I+ Sbjct: 61 EILPLVMILATVAMFIGLARSSELVATRAAGRSGLTALMAPATVALLIGAIIVAMMNPIV 120 Query: 122 EPKCRSTIK-QLSAKAQLALTFSYLEENLFFR---LDDDLYIKISKYNPNNT-LQGIFIV 176 + + + ++ S+ E L+ R D I+ ++ NP T L + IV Sbjct: 121 AATSKRYADLRETYESGNTSAVSFGPEGLWLRQGGEDGQSVIRAARANPEATELYDVSIV 180 Query: 177 D-SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI-SKDISIMKFKSYTLQTESAN 234 + D A+S ++ A L D + +P + ++ Y L + Sbjct: 181 TYAPDGGPAMRIQAESAALSDG--AWHLTDAKAWPLTPGLNPELGARLHVEYELPSTLTR 238 Query: 235 SSTIVL--KANDQNLSFL---LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 S + + + L + + + Y E L + LF V L+ Sbjct: 239 ESIRDRFGRPSAVAIWDLPQFIAGLEESGFSARRHIVWYNME----LARPLFLVAMVLVG 294 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 + R + + ++ + FG+++ S+ + +N P++ ++ +S+ Sbjct: 295 AAFTMQP--TRLARTGLAVLSAVLLGFGLYYVRSF-AQIMGENGQLAPVVAAWVPPTASV 351 Query: 350 FLLM 353 L + Sbjct: 352 LLAL 355 >gi|87198520|ref|YP_495777.1| permease YjgP/YjgQ [Novosphingobium aromaticivorans DSM 12444] gi|87134201|gb|ABD24943.1| permease YjgP/YjgQ [Novosphingobium aromaticivorans DSM 12444] Length = 366 Score = 76.9 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 114/326 (34%), Gaps = 28/326 (8%) Query: 38 LVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRI 97 ++++ LL +P ++ P+ + T L ++N+N+E++ + G S Sbjct: 46 VLAAPGNGQGELLTYVSLRMPQLVSRFLPYSVLLATIITLMTLNQNSEVIAMKAAGLSAH 105 Query: 98 TLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLS-AKAQLALTFSYLEENLFFRLDDD 156 ++ P+ +A S+ F I + ST+K S + N++ + + Sbjct: 106 QVLAPLFLVAAATSVVTFAFNERIVTRSTSTLKAWQDVDYGPIPVESATKSNVWLQDGPN 165 Query: 157 LYIKISKYNPNNT---LQGIFIVDSRDTQ--THKIYYAQSGSIDLDRQAI---ILNDGEV 208 + + + G+ RD +I A S S ++ D + Sbjct: 166 I-LFARSVAGQGKAMHMTGVSWY-RRDPTGMVTEIVTAPSASYANPGWRFREPVMFDVQS 223 Query: 209 HRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFL---LNPNPNNPNYRPELL 265 RK+ ++ + + E + A+ ++L+ L L + EL Sbjct: 224 ARKTALAAS------EVFAKSVEPVQVVISRVDADAESLTQLTGSLAAIRDAGFRTTELD 277 Query: 266 ETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYI 325 + +++ L ++ L+ VAA L R I +++ F F F Sbjct: 278 GKW----WHKISGPLSALLMPLLGAVAAFG--LARSGHLFVRAVIGMALGFAYFV-FDNA 330 Query: 326 IHKIEQNPYYIPILYLF-LFCISSIF 350 + Y P L + F + + Sbjct: 331 ALAMGNFGAYPPFLAAWAPFVLFLLI 356 >gi|313680974|ref|YP_004058713.1| permease yjgp/yjgq family protein [Oceanithermus profundus DSM 14977] gi|313153689|gb|ADR37540.1| permease YjgP/YjgQ family protein [Oceanithermus profundus DSM 14977] Length = 377 Score = 76.9 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 65/367 (17%), Positives = 120/367 (32%), Gaps = 34/367 (9%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YILR + L+S L V + + + +L GY +P VL Sbjct: 3 TILDRYILREVVPVLLVSALLYVAVFLFGFFYVGSRWL--DGAPVLKVLTWLGYHVPGVL 60 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 V P M +L G S + L++PVL L LL+ F + Sbjct: 61 VQVLPMAVVSAVVIPFGRMATEGAVLATQAGGVSLVRLLRPVLLLGFLLAGFSLYLSENV 120 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLE-ENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 P+ + ++ L + + + S Y+ + + G+ + + Sbjct: 121 VPESNARVRGYWYDELTTPGHGLYRLRGKTVPLGNGIELFFSGYDWAHRAMTGVRLQLWK 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAII----------LNDGEVHRKSPISKDISIMKFKSYTLQ 229 D Q + +A G + DG ++ FK+ ++ Sbjct: 181 DRQV-TVIFADRGVYQGRDLKLTGYRIYTVDYAAIDGLLNASDAQLPARLQQVFKNVSVP 239 Query: 230 TESANSSTIVLK-ANDQNLSFLLNPNPNNPNYRPELLETYR-------------SEFHKR 275 S+TI + + D+ L+ +P + E + Y FH + Sbjct: 240 RSEEASTTIKVGLSRDEALANFADPLAADTLSLSEAWQRYTDPKLAPADRTDAGLAFHSK 299 Query: 276 LTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY 335 L L V+ LIS+ A + R + +S+ I+ G + F + + Sbjct: 300 LALPLANVVLVLISLPFA----VYYGRSPGLSMGMSVMIAVGYYLVFL-LARSMGGLGML 354 Query: 336 IPILYLF 342 P L + Sbjct: 355 PPALAAW 361 >gi|27379217|ref|NP_770746.1| permease [Bradyrhizobium japonicum USDA 110] gi|27352368|dbj|BAC49371.1| bll4106 [Bradyrhizobium japonicum USDA 110] Length = 363 Score = 76.9 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 53/359 (14%), Positives = 127/359 (35%), Gaps = 25/359 (6%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS----STESLNILLKISGYLI 57 + Y + + I ++ ++ I +V ++ S ++ + S + + Sbjct: 4 NTLGRYFAGRFV---VAALGVFASIFLLLVLVDYIEMVRKTSGLASASAIMVAETSLFRV 60 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 P +L +TPFC + +++R EL++ G S I P L A+L+ + ++ Sbjct: 61 PQLLEKLTPFCMLIGAMTCYLALSRRLELVVARAAGVSAWQFISPALGSALLIGVIATVA 120 Query: 118 ENIIEPKCRSTIKQLSAKAQLALTFSYLEE--NLFFR--LDDDLYIKISKYNPNN--TLQ 171 N + R K++ A+ + +++ + +D I + + L Sbjct: 121 YNPMSANLRELSKRMEAELFGSAPGGGIQDASGFWLNQVTNDGQTIINAARSEQQGVRLT 180 Query: 172 GIFIV-DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT 230 G+ + + + A+ +++ + I + V R S I + T Sbjct: 181 GLTLFRFDTEQHFKERVEAREAELEVGQ--WIFRN--VRRFSLDGPPIEQAV---LAIPT 233 Query: 231 ESANSSTIVLKANDQNLSFLLNPN-PNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 + + + +SF P+ + YR ++HK L Q ++ ++ Sbjct: 234 TLTEAQVRNSFSTPETVSFWQLPSYIRSSESSGFATAGYRLQYHKLLAQPF--LLAAMVM 291 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 + A+ R + + F ++ S + + + PI +L + Sbjct: 292 LAASVSLRFFRMGGVQKMVLSGVGAGFLLYV-LSKVTEDLSKAELMHPIAAAWLPVVVG 349 >gi|34557088|ref|NP_906903.1| hypothetical protein WS0675 [Wolinella succinogenes DSM 1740] gi|34482803|emb|CAE09803.1| conserved hypothetical protein [Wolinella succinogenes] Length = 345 Score = 76.9 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 50/346 (14%), Positives = 124/346 (35%), Gaps = 21/346 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + + Y+ + F + FI+ VI ++ + S L ++ Y +PT+ Sbjct: 1 MGNLKKYLFGSFAQLFFPIFAVLFFISSVILFIKIAGVTFVVKMSFGELFELYLYSLPTM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P F + L +++ EL ++ + G + + L++L+S+FL + Sbjct: 61 IFFTIPVTFFSASVISLAKLSQEYELPVLFSLGIDPLRFSRLFFPLSLLVSLFLLLVSLA 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 + P + + ++ + L+ F + + + + + + + + S Sbjct: 121 LVPLSNEAYDRFLDHKKSSVNIN-LKPAEFGQKLGNWLVYVGDMDEGEKRYKEVVMFSSN 179 Query: 180 DTQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 D A+ ++ + L G + K + I + + ++ + Sbjct: 180 DLGRESFILAKEALVESMEGNLELKLFRGSAYFKEELH--IKRVDYAQMLIRDSAFKEGG 237 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 L L ++ R L+ + +F L S+ Sbjct: 238 ASLGIMGYWKQALGGEKGSDKVRRK-------------LSSSILISLFPLASLFFIPLLG 284 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYII--HKIEQNPYYIPILYL 341 ++ R + + + + I+ G+F+G +I H + IP+++L Sbjct: 285 IMHPRFQKNYSYFYVIIATGIFYGLVHIASNHLPLAGIFLIPLIWL 330 >gi|114798132|ref|YP_760297.1| putative permease [Hyphomonas neptunium ATCC 15444] gi|114738306|gb|ABI76431.1| putative permease [Hyphomonas neptunium ATCC 15444] Length = 351 Score = 76.5 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 51/370 (13%), Positives = 108/370 (29%), Gaps = 41/370 (11%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 Y+ + L++ +V + V+ L + + + ++ +P + Sbjct: 3 SRLSRYLSWLFLQRLLVTVFALVALLGVLDALSNADKLPA-GAGFEGQMRYMWLRLPALF 61 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + F F + S+ R EL+ I G S ++ ++ + L ++ + + Sbjct: 62 DRIVVFAFLLAALLTYASLIRRNELVAISAAGISVFGQMRTLIPVVFLTAVAAAFIIDTV 121 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P ++ L EE L D ++ K L GI I + Sbjct: 122 GPPASRSLLAWLGPEALQEDAQVPEE---LWLSDGKFLIELKSMQAEELTGITIFERNAE 178 Query: 182 QTHKIY-YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 A++ A+ G R+ E T Sbjct: 179 GAVVAITTAETARPADGGWAL---SGTGQRR----------------FDGEPPTDMTFWT 219 Query: 241 KAND-QNLSFLLNPNPNNPNYRPELLETYRS---------EFHK--RLTQWLFPVIFGLI 288 ++L LL+P + L R E R L V F L+ Sbjct: 220 SPQTPESLQLLLSPPRDLAISNLIALSEMRGSGSRPSGAYELWALNRFLLPLTAVGFLLL 279 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFW---GFSYIIHKIEQNPYYIPILYLFLFC 345 ++ + R+ + +++ F + +P L + Sbjct: 280 AVPVM--QVYGRRSNADIAVAAGVAVGFFYMVVDGILKTLAENGSISPILAVALPILALF 337 Query: 346 ISSIFLLMIK 355 + S++L + + Sbjct: 338 LGSMWLALER 347 >gi|148651872|ref|YP_001278965.1| permease YjgP/YjgQ family protein [Psychrobacter sp. PRwf-1] gi|148570956|gb|ABQ93015.1| permease YjgP/YjgQ family protein [Psychrobacter sp. PRwf-1] Length = 449 Score = 76.5 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 1/132 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y+ + + L + L + + V L + + S + L Y P L Sbjct: 19 RIISRYVKKNALFAMLFAVLGLWALQMVFAYLAELEDI-SDAYTYVDALTYIFYRSPYFL 77 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + L + N+EL+++ G S ++ VL A + I + I Sbjct: 78 QQFMPTGALLGAVVGLGLLANNSELIVMRAAGLSIYRIVGWVLQPAFIFVILALLINQFI 137 Query: 122 EPKCRSTIKQLS 133 P+ Q+ Sbjct: 138 LPQSNVKASQIR 149 >gi|294678215|ref|YP_003578830.1| permease YjgP/YjgQ family protein [Rhodobacter capsulatus SB 1003] gi|294477035|gb|ADE86423.1| permease YjgP/YjgQ family protein [Rhodobacter capsulatus SB 1003] Length = 366 Score = 76.2 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 47/313 (15%), Positives = 114/313 (36%), Gaps = 18/313 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + LYI R G++FL+ + ++I+++++I + + +L+ ++ +P+ L Sbjct: 2 TLSLYIARRFGQAFLIVAGAFWGVLFLIEMVEQIRRLDPARGALSDAAHLAALSVPSTLY 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + + R++EL++I G S + ++ + +A+L+ + L N I Sbjct: 62 TIFPLVVMLSGVVAFLGLARSSELVVIRAAGRSALRMLLAPVTVALLIGVLLVAVGNPIV 121 Query: 123 PKCRSTIKQLSAKAQLA--LTFSYLEENLFFR----LDDDLYIKISKYNPNNT-LQGI-F 174 +++ + + T S E L+ R I + N + T L + F Sbjct: 122 SATSKRAEEIEGQLRAEGRQTVSIGREGLWMRQGTADGGQAVIHAMRGNADATALYQVTF 181 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAI-ILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 ++ + A S + + D + R + +D + + S + Sbjct: 182 LLFDAKAGPVRRIDAASAWLTPGAWVLSEAKDWPLGRSTNPERDATRAQTISLPSTLTAE 241 Query: 234 NSSTIVLKANDQNLSFL---LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 + + + + L + + + E L Q L ++ ++ + Sbjct: 242 SIADSFGAPSAMPIWELPGFIRALEAAGFSARRHIVWLQVE----LAQPL--MLAAMVLV 295 Query: 291 VAADKRALVRQRK 303 A R Sbjct: 296 AAGFTMRPARFGG 308 >gi|118590093|ref|ZP_01547496.1| permease YjgP/YjgQ [Stappia aggregata IAM 12614] gi|118437065|gb|EAV43703.1| permease YjgP/YjgQ [Stappia aggregata IAM 12614] Length = 364 Score = 76.2 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 55/368 (14%), Positives = 119/368 (32%), Gaps = 37/368 (10%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTV 60 ++ LY ++ L LF + ++ +L+ + S+ + IS +P + Sbjct: 5 RTLSLYFSGRFLKAILGLFLFAAVLIYLFDVLELVRRGGDREGFSVLRVAMISALRVPLL 64 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V PF +++R EL++ +G S P + + I+L I N Sbjct: 65 LEQVIPFTVLFGAIAAFVTLSRALELVVARASGISVWQFSLPAILVGIILGILSITVYNP 124 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT----------- 169 + +++A + L+ +D++++ + + Sbjct: 125 AAVWFQQKSDEVAAGLFGSEQSFLLQ------SSNDVWVRQDGLDGESVLLAKQLLEGGT 178 Query: 170 -LQGIFIVD-SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPIS---KDISIMKF- 223 L+G+ I +D + A + Q L + V+ I F Sbjct: 179 LLRGVTIFTFDKDGTFRERIEADEARL--GDQIWYLENAIVYTTEQDPQPYGQYQISTFL 236 Query: 224 KSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPV 283 + ++ + +I + + L N P YR L L + L + Sbjct: 237 TATEVRESIGSPESISFWNLPRFIE--LARNAGLPAYRYNLQYQTL------LARPL--L 286 Query: 284 IFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 + +I I AA + R I + F ++ + P++ + Sbjct: 287 LVAMILIAAAVSLKVSRFGGLGSMILGGILSGFVLYVLTE-LAKDFGGAGIVPPLVAAWA 345 Query: 344 FCISSIFL 351 I + + Sbjct: 346 PGIFGVLM 353 >gi|83953613|ref|ZP_00962334.1| permease, YjgP/YjgQ family protein [Sulfitobacter sp. NAS-14.1] gi|83841558|gb|EAP80727.1| permease, YjgP/YjgQ family protein [Sulfitobacter sp. NAS-14.1] Length = 365 Score = 76.2 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 49/350 (14%), Positives = 122/350 (34%), Gaps = 23/350 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 LY R F++ + + ++ ++ + SS L ++ P + Sbjct: 2 ILHLYFARRFIMGFILISAVLFSLLVLVDMVDQARRFSSYDIGWLRLFGMTLLKTPETMN 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + T + S+ R++EL++ G S ++ ++ +++A ++ + N I Sbjct: 62 LILPLIMILATVVLFLSLARSSELVVTRAAGRSALSALQAPIWVAFIIGVMAVGMLNPIV 121 Query: 123 PKCRSTIKQLSAKAQLALTF--SYLEENLFFRLDDD---LYIKISKYNPN-NTLQGI-FI 175 QLS + T S +E L+ R D I+ + N + + L + F+ Sbjct: 122 AATAKRYIQLSDSIRAGGTSVLSVSDEGLWLRQGSDEGQTVIRAWRSNKDASVLYDVTFL 181 Query: 176 VDSRDTQTHKIYYAQSGSID------LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ 229 + ++ + A S +++ D ++ L G + + D + Sbjct: 182 SYAPESGPARRIEADSAALEDGIWTLTDAKSWPLEVGVNAEGAAETFDTLTL-----PST 236 Query: 230 TESANSSTIVLKANDQNLSFLLNPN-PNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 + ++ L P+ ++ L + F + ++ Sbjct: 237 LTLDRIRDSITDPGAVSIYDL--PDYIKQLELAGFSPRRHKVWLQTELARPFF--LVAMV 292 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 + +A R + S+ + FG+++ S+ E + + Sbjct: 293 LVASAFTMRHTRFGGTGVAVLASVLMGFGLYFIRSFAQILGENGQIPVLL 342 >gi|83942393|ref|ZP_00954854.1| permease, YjgP/YjgQ family protein [Sulfitobacter sp. EE-36] gi|83846486|gb|EAP84362.1| permease, YjgP/YjgQ family protein [Sulfitobacter sp. EE-36] Length = 365 Score = 76.2 bits (186), Expect = 8e-12, Method: Composition-based stats. Identities = 49/350 (14%), Positives = 121/350 (34%), Gaps = 23/350 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 LY R F++ + + ++ ++ + SS L ++ P + Sbjct: 2 ILHLYFARRFIMGFILISAVLFSLLVLVDMVDQARRFSSYDIGWLRLFGMTLLNTPETMN 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + T + S+ R++EL++ G S ++ ++ +++A ++ + N I Sbjct: 62 LILPLIMILATVVLFLSLARSSELVVTRAAGRSALSALQAPIWVAFIIGVMAVGMLNPIV 121 Query: 123 PKCRSTIKQLSAKAQLALTF--SYLEENLFFRLDDD---LYIKISKYNPN-NTLQGI-FI 175 QLS + T S +E L+ R D I+ + N + + L + F+ Sbjct: 122 AATAKRYIQLSDSIRAGGTSVLSVSDEGLWLRQGSDEGQTVIRAWRSNKDASVLYDVTFL 181 Query: 176 VDSRDTQTHKIYYAQSGSID------LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ 229 + + + A S +++ D ++ L G + + D + Sbjct: 182 SYAPEGGPARRIEADSAALENGIWTLTDAKSWPLEVGVNAEGAAETFDTLTL-----PST 236 Query: 230 TESANSSTIVLKANDQNLSFLLNPN-PNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 + ++ L P+ ++ L + F + ++ Sbjct: 237 LTLDRIRDSITDPGAVSIYDL--PDYIKQLELAGFSPRRHKVWLQTELARPFF--LVAMV 292 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 + +A R + S+ + FG+++ S+ E + + Sbjct: 293 LVASAFTMRHTRFGGTGVAVLASVLMGFGLYFIRSFAQILGENGQIPVLL 342 >gi|77463458|ref|YP_352962.1| putative permease [Rhodobacter sphaeroides 2.4.1] gi|221639316|ref|YP_002525578.1| permease Yjgp/YjgQ family protein [Rhodobacter sphaeroides KD131] gi|332558335|ref|ZP_08412657.1| Permease YjgP/YjgQ family protein precursor [Rhodobacter sphaeroides WS8N] gi|77387876|gb|ABA79061.1| putative permease [Rhodobacter sphaeroides 2.4.1] gi|221160097|gb|ACM01077.1| Permease YjgP/YjgQ family protein precursor [Rhodobacter sphaeroides KD131] gi|332276047|gb|EGJ21362.1| Permease YjgP/YjgQ family protein precursor [Rhodobacter sphaeroides WS8N] Length = 364 Score = 76.2 bits (186), Expect = 8e-12, Method: Composition-based stats. Identities = 51/372 (13%), Positives = 117/372 (31%), Gaps = 32/372 (8%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 YI R R + L + +I +L ++ S +L +S +P L Sbjct: 2 ILSRYIARRFLRMVFIVFLAFFGLMMLIDVLDQMRRFSDEGITLVQAGLLSLLRVPATLY 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + + + R++EL+++ G S + + + +A+ L N I Sbjct: 62 TILPLIVILAAVALFLGLARSSELVVVRAAGRSGLRFLVAPMVVALALGTVAVTVLNPIV 121 Query: 123 PKCRSTIKQLSAKAQLALTF--SYLEENLFFR---LDDDLYIKISKYNPNNT-LQGI-FI 175 + + S +E L+ R + I + N + T L + F+ Sbjct: 122 AGTSRQYDAAAGRLARGEASILSISKEGLWLRQGGSGEQTVIHALRSNTDGTRLYAVTFL 181 Query: 176 VDSRDTQTHKIYYAQSGSID------LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ 229 + + A+ +++ ++ L + ++ + ++ + + Sbjct: 182 TFDAEGRPTGRIAAEQAALERGYWQLSGAKSWDLTEANPEARAGLPGNLRVTS------E 235 Query: 230 TESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLET-YRSEFHKRLTQWLFPVIFGLI 288 + + L P Y L + + H+ Q F + L Sbjct: 236 LTREGIQDSFGDPSAIPIWEL-------PAYVAGLERAGFSARKHRVWMQMEFALPATLA 288 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSY--IIHKIEQNPYYIPILYLF---L 343 ++V +R + + L G F F + +N +L + L Sbjct: 289 AMVLVAAGFTMRHSRFGGTGRMVLLALLGGFSLFFLRNFAQVLGENGQIPILLAAWSPPL 348 Query: 344 FCISSIFLLMIK 355 + L++ Sbjct: 349 IGVMGSLGLLLH 360 >gi|126462313|ref|YP_001043427.1| permease YjgP/YjgQ family protein [Rhodobacter sphaeroides ATCC 17029] gi|126103977|gb|ABN76655.1| permease YjgP/YjgQ family protein [Rhodobacter sphaeroides ATCC 17029] Length = 364 Score = 76.2 bits (186), Expect = 8e-12, Method: Composition-based stats. Identities = 51/372 (13%), Positives = 117/372 (31%), Gaps = 32/372 (8%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 YI R R + L + +I +L ++ S +L +S +P L Sbjct: 2 ILSRYIARRFLRMVFIVFLAFFGLMMLIDVLDQMRRFSDEGITLVQAGLLSLLRVPATLY 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + + + R++EL+++ G S + + + +A+ L N I Sbjct: 62 TILPLIVILAAVALFLGLARSSELVVVRAAGRSGLRFLVAPMVVALALGTVAVTVLNPIV 121 Query: 123 PKCRSTIKQLSAKAQLALTF--SYLEENLFFR---LDDDLYIKISKYNPNNT-LQGI-FI 175 + + S +E L+ R + I + N + T L + F+ Sbjct: 122 AGTSRQYDAAAGRLARGEASILSISKEGLWLRQGGSGEQTVIHALRSNTDGTRLYAVTFL 181 Query: 176 VDSRDTQTHKIYYAQSGSID------LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ 229 + + A+ +++ ++ L + ++ + ++ + + Sbjct: 182 TFDAEGRPTGRIAAEQAALERGYWQLSGAKSWDLTEANPEARASLPGNLRVTS------E 235 Query: 230 TESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLET-YRSEFHKRLTQWLFPVIFGLI 288 + + L P Y L + + H+ Q F + L Sbjct: 236 LTREGIQDSFGDPSAIPIWEL-------PAYVAGLERAGFSARKHRVWMQMEFALPATLA 288 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSY--IIHKIEQNPYYIPILYLF---L 343 ++V +R + + L G F F + +N +L + L Sbjct: 289 AMVLVAAGFTMRHSRFGGTGRMVLLALLGGFSLFFLRNFAQVLGENGQIPILLAAWSPPL 348 Query: 344 FCISSIFLLMIK 355 + L++ Sbjct: 349 IGVMGSLGLLLH 360 >gi|145637644|ref|ZP_01793299.1| predicted permease [Haemophilus influenzae PittHH] gi|145269167|gb|EDK09115.1| predicted permease [Haemophilus influenzae PittHH] Length = 161 Score = 76.2 bits (186), Expect = 9e-12, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 63/146 (43%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + + YI + I + + + +V ++ +I+ +++ V T + + +G IP Sbjct: 2 INTLDRYIGKSILGTIFATLMTLVGLSAIIKFVEQFRSVGKGTYDIWQAVIFTGLTIPKD 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ +EL+I+ + G SR + V+ A+ L +F I Sbjct: 62 IETFFPMAALLGALIALGNLASRSELVIMQSAGFSRFKIGIAVMKTALPLVVFTVIIGEW 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLE 146 P+ + + AKA + ++ Sbjct: 122 GIPQTEQFARDMRAKALSGGSILSIK 147 >gi|328544012|ref|YP_004304121.1| permease YjgP/YjgQ [polymorphum gilvum SL003B-26A1] gi|326413756|gb|ADZ70819.1| Permease YjgP/YjgQ [Polymorphum gilvum SL003B-26A1] Length = 363 Score = 75.8 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 37/232 (15%), Positives = 82/232 (35%), Gaps = 10/232 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTE-SLNILLKISGYLIPTVL 61 + LY R ++ L L + ++ +L+ + + S+ + IS +P +L Sbjct: 5 TLTLYFSRRFLKAILGLFLLAAVLIFLFDVLELLRRAGERGDFSVLRITLISLLRVPLLL 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 V PF +++R EL++ G S P + +A+++ + N + Sbjct: 65 EQVLPFAVLFGAIWAFVTLSRALELVVARAAGISVWQFGAPAVLVALIIGLVSVTLYNPM 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLE--ENLFFRLD--DDLYIKISK--YNPNNTLQGIFI 175 + +++A L+ ++ R D D + ++ + L G+ I Sbjct: 125 AVWMQERSNEVAAGIFGTEETFLLQTTNAVWIRQDGLDGESVLNAEQLLDHGERLLGVTI 184 Query: 176 VD-SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSY 226 R + A+ + Q L D V+ + + +Y Sbjct: 185 FTFDRAGSFQERIEAREARLR--NQFWHLKDVIVYTTESDPQRYGTYEVSTY 234 >gi|300905894|ref|ZP_07123627.1| hypothetical protein HMPREF9536_03886 [Escherichia coli MS 84-1] gi|301304160|ref|ZP_07210276.1| hypothetical protein HMPREF9347_02760 [Escherichia coli MS 124-1] gi|300402363|gb|EFJ85901.1| hypothetical protein HMPREF9536_03886 [Escherichia coli MS 84-1] gi|300840573|gb|EFK68333.1| hypothetical protein HMPREF9347_02760 [Escherichia coli MS 124-1] gi|315256878|gb|EFU36846.1| putative permease [Escherichia coli MS 85-1] Length = 344 Score = 75.8 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 55/358 (15%), Positives = 121/358 (33%), Gaps = 25/358 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 T-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 YA+S +I D+ +L+ G H+K K+ E+ ++ Sbjct: 181 DLSLESYIYARSATIKDDKT-WVLH-GVNHKKWLNGKE-----------TLETLDNLAWQ 227 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 NL L P + Y E Q + + L+++ Sbjct: 228 SAFTSMNLEELSMPGNTFSVRQLNHYIHYLQET----GQPILTLAMILLAVPFTFTAP-- 281 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-----FLFCISSIFLL 352 R + + + + + + +++ P+ L F+ S+ Sbjct: 282 RSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYW 339 >gi|302383688|ref|YP_003819511.1| permease YjgP/YjgQ family protein [Brevundimonas subvibrioides ATCC 15264] gi|302194316|gb|ADL01888.1| permease YjgP/YjgQ family protein [Brevundimonas subvibrioides ATCC 15264] Length = 381 Score = 75.8 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 56/365 (15%), Positives = 125/365 (34%), Gaps = 20/365 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNI-LLKISGYLIPT 59 + E Y+L +G+S ++ I + +I ++ + S T+ + +L + P Sbjct: 20 LGRIERYVLLQLGKSLAVALGVISALVMLIDFVEISRGLGSDTDLSGVRILGLMLIKSPA 79 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 V+ + PF F T +NR +EL+ + G S + P A+ + Sbjct: 80 VIVQLLPFVFLFGTLAAFVGLNRRSELIAMRAAGVSAWRFVLPAAGAALAAGVLTVTVIG 139 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD---LYIK-ISKYNPNNTLQGI-F 174 + ++ + A+ +E ++ R + + ++ + N L + F Sbjct: 140 PLAASGDGMFQRERGRISGAVG-GGEQEAIWLREGEGQRQMVVRAARQDRANARLLDVTF 198 Query: 175 IVDSRDTQTHKIYY----AQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT 230 + + D + + + A S S+ R ++ ++ + L + Sbjct: 199 FIYATDPEGRRAFTERIDAASASLSAGRWRLV-------DAVGAQTGQRATRYSTLDLPS 251 Query: 231 ESANSSTIVLKANDQNLSFLLNPNP-NNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 A+ A Q+ F P YR + L+ L +++ Sbjct: 252 SLADDEAFERFARPQSTPFWSLPGQIQRIEAAGFSSTAYRLRLQQLLSTPLAFAAMTILA 311 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISS 348 + + + ++ + L +F FS + E P +I L L +++ Sbjct: 312 AAFSLRLMRLGDLARMAVAAVVLGFAFFFLNQFSAAMGSAEVVPPFIAAWLPAVLTALAA 371 Query: 349 IFLLM 353 LL Sbjct: 372 FTLLF 376 >gi|312888277|ref|ZP_07747853.1| permease YjgP/YjgQ family protein [Mucilaginibacter paludis DSM 18603] gi|311299111|gb|EFQ76204.1| permease YjgP/YjgQ family protein [Mucilaginibacter paludis DSM 18603] Length = 362 Score = 75.4 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 46/328 (14%), Positives = 122/328 (37%), Gaps = 13/328 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 +K F+ YI++ +F+ + + + V + ++++ + SL I+ + IP Sbjct: 6 IKIFDWYIIKKYLGTFVFTIAIFIVVIVVFDVSEKLDNFLKNNVSLKEIIFEYYAGSIPF 65 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + M++P + M TE++ + ++G S ++P A L+ I +++ Sbjct: 66 YIDMLSPLINFLAVIFFTAKMANQTEIVPVLSSGASFNRFLRPYFICASLIFIVSLLADI 125 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P +++ + + + ++ +LD+ ++ + ++ + F ++ Sbjct: 126 YLIPFTNKL--KITFENAYVVLEDPTKSDVHIKLDEHTFVYMQSFDNASKTGYQFTLEKF 183 Query: 180 DTQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 D + A D ++ + + + + + + + K L A+ Sbjct: 184 DGDVLKQKLTANKIVYDSLKRVWSIQQFDTRYVNGLREKMVHGEKKDTVLDMVPADFVLH 243 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + + L N ++ E +KR + + LI + Sbjct: 244 NNIYSAMSRKELDNNIKKEEYRGTGVINDMLIEKYKRFVHPMASFVLTLIGVSL-----S 298 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYII 326 R+ + + L + G F F+YI+ Sbjct: 299 SRKVRG----GVGLPLGIGFFLCFAYIV 322 >gi|332521048|ref|ZP_08397506.1| permease YjgP/YjgQ family protein [Lacinutrix algicola 5H-3-7-4] gi|332043141|gb|EGI79338.1| permease YjgP/YjgQ family protein [Lacinutrix algicola 5H-3-7-4] Length = 340 Score = 75.4 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 48/350 (13%), Positives = 117/350 (33%), Gaps = 16/350 (4%) Query: 14 RSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMET 73 L+ + + +I + ++ + E+L L + Y ++ P + Sbjct: 1 MMILLFIPIGITVHLAEKIGKILDREAPLGETLIYFLDFTIY----FAHLLFPLFLFLSV 56 Query: 74 TNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLS 133 + + NTE++ ++G S ++P L A ++++F + + P Sbjct: 57 IWFTSKLANNTEVIAFLSSGVSFTRFLRPYLIGATIVAMFSILLGLYLAPVASKGFNDFQ 116 Query: 134 AKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDTQTHKIYYAQSG 192 K + N+ +++D I +S ++P T + + + A + Sbjct: 117 YKYLKRKNNQA-QSNVLKQINDKEIIYVSSFDPIKKTGLNFSLEHFENNKMTYKISAANI 175 Query: 193 SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLN 252 + L +++I + K E + A S L Sbjct: 176 RYIEEDSIYRLRSYLKRNVGENEDELAIERKKDTIFSFELEDLVPEEYIAETLRYSELTR 235 Query: 253 PNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISL 312 + Y+ E +++ + + I +I++ ++R+ + ++ Sbjct: 236 FIEREEKRGSSNIGRYKLELYRKWSLPVSVFILTIIAVAV-----SSKKRRGGMGVNLAF 290 Query: 313 SISFG-VFWGFSYIIHKIEQNPYYIPILYLFL----FCISSIFLLMIKKK 357 I VF F I + + P++ ++ F I + LL K+ Sbjct: 291 GICIAMVFVFFDKIFGTMAAQSDFSPLIAVWFPNFIFGILAAILLYNAKR 340 >gi|288958014|ref|YP_003448355.1| hypothetical protein AZL_011730 [Azospirillum sp. B510] gi|288910322|dbj|BAI71811.1| hypothetical protein AZL_011730 [Azospirillum sp. B510] Length = 364 Score = 75.4 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 51/357 (14%), Positives = 117/357 (32%), Gaps = 20/357 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTVL 61 + YI R F + + ++ I ++ ++ + + + ++++++ +P + Sbjct: 6 TLSRYIGRQFIFWFCLLMVILLAIVLLLDTVELLRRAGTKPHVTFGLVVEMALLKLPEIG 65 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF + R+ EL++ G S + PV+F A + + N + Sbjct: 66 QQIFPFVILFAGMFTFWRLTRSAELVVARAVGVSAWQFLMPVMFAAAAIGVVKVTLVNPV 125 Query: 122 EPKCRSTIKQLSAKA--QLALTFSYLEENLF---FRLDDDLYIKISKYNPNN-TLQG--I 173 + QL + + + + L+ + +I NP L + Sbjct: 126 GAVFIAKYDQLQDRYLKLQSSSLNISRSGLWLRQTNETEQFFIHAELVNPATFELSNVVV 185 Query: 174 FIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 F+ D+ D A S + + L D ++R + + SYT+ TE Sbjct: 186 FLFDA-DQNYLARVDAPSAVLR--ERKWELQDAILNRAKKDPEKL-----DSYTIPTELD 237 Query: 234 NSS-TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 ++ + + L + +R + L Q + ++ A Sbjct: 238 MATIEESFAPPETISFWELPRFIHTLETTGFPAVRHRLHYQSLLAQPF--LFLAMVLFAA 295 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 A L R+ + + + F +F + I + IS + Sbjct: 296 AFSLRLPRRGGTMAMVTGGVLTGFVLFVMTDVVRTFGMSETIPIIMAAWSPAGISLL 352 >gi|29840522|ref|NP_829628.1| YjgP/YjgQ family protein [Chlamydophila caviae GPIC] gi|29834871|gb|AAP05506.1| YjgP/YjgQ family protein [Chlamydophila caviae GPIC] Length = 357 Score = 75.4 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 45/325 (13%), Positives = 109/325 (33%), Gaps = 13/325 (4%) Query: 40 SSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITL 99 + +L+++ Y IP +LP + P + + ++ N ++ + +G S+ + Sbjct: 39 IAKDVPYLTVLRLTAYQIPYLLPFILPVSCFISAFALFRGLSDNNQITFLKASGASQGII 98 Query: 100 IKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI 159 P+L ++ + F + + + CR + A + L+ + +++ Sbjct: 99 TFPILMVSCAICCINFYTCSELASICRFQTCKEIANMAMTSPTLLLQ--TLQKKENNRIF 156 Query: 160 KISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDIS 219 + + + I RD + + ++ D+ + D + K P + Sbjct: 157 ITVDHCAKSKFDNVIIALKRDKEIANVGIIKTIIPDVANDTVEARDVVMISKLPSTLTEQ 216 Query: 220 IMK-FKSY---TLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKR 275 K Y TL T L A + + P + + E +R Sbjct: 217 HSSNSKEYYIETLDEMLIPKITSTLFAGKSYMKTRTDYLPWKQLVKQSFSHAHLPETLRR 276 Query: 276 LTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY 335 ++ L + +V + R+ I+L F V I+ K Sbjct: 277 ISIGLLCITLTYSGMVLGTYKPRFRKS-------ITLYCIFPVMDLILLIVGKNTTTLLP 329 Query: 336 IPILYLFLFCISSIFLLMIKKKYTK 360 ++++ I+ I + + ++ Sbjct: 330 AFMMFIIPQVITWIVFSIRAYRESR 354 >gi|218249949|ref|YP_002375305.1| hypothetical protein BbuZS7_0837 [Borrelia burgdorferi ZS7] gi|226321272|ref|ZP_03796800.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi Bol26] gi|218165137|gb|ACK75198.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi ZS7] gi|226233304|gb|EEH32055.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi Bol26] Length = 429 Score = 75.4 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 43/207 (20%), Positives = 86/207 (41%), Gaps = 5/207 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 S+E YI+ + FL++ LF F+ ++ QIL + ++ + Y +P V+ Sbjct: 6 NSYESYIIAEFFKYFLITFLFFFFVFFINQILFFMRILLQNYVPFFKAFIFIIYSLPMVI 65 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF + + + E+L + G S LI P L I+++ FIS +I+ Sbjct: 66 ALSPPFASLISVILTIHKFKLHNEILAFRSIGISIFDLIVPFFKLGIVIAFVSFISNDIL 125 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD- 180 P ++ + + + L+ + DL + + N + + D+ Sbjct: 126 LPLGSIGRLKIFNEIKEEVPHLVLKPYS-SKQYGDLIFVSGEKSENG-YKNVTFFDNTGL 183 Query: 181 TQTHKIYYAQSGSIDLDRQAI--ILND 205 +I+ A++ I + + ILND Sbjct: 184 KGFDRIFMAKNLDIRKENFQVYFILND 210 >gi|254467255|ref|ZP_05080666.1| permease YjgP/YjgQ [Rhodobacterales bacterium Y4I] gi|206688163|gb|EDZ48645.1| permease YjgP/YjgQ [Rhodobacterales bacterium Y4I] Length = 367 Score = 75.4 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 55/340 (16%), Positives = 112/340 (32%), Gaps = 15/340 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 +LY R + FL+ C ++ + +I + ++I + L L+ +S IP L Sbjct: 2 KLDLYYARRFLQWFLVICAVLMTLVILIDLNEQIRRFEGAGLGLPQLVGLSLLNIPAALS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + T + + R++EL++ G S I + + A + + N I Sbjct: 62 EFLPLIMILTTIVLFVGLARSSELVVTRAIGRSGIRALAAPVLAAAGIGVLAVTMLNPIA 121 Query: 123 PKCRSTIKQLSAKAQLALTF--SYLEENLFFRLDDDL---YIKISKYNPNN---TLQGIF 174 + + L+ S E L+ R I Y+ + TL + Sbjct: 122 AATANRYQDLAETYHNGGPSALSLSGEGLWLRQGGARGQSVIHAKGYSGDAADITLHDVS 181 Query: 175 IVDSRDTQTH-KIYYAQSGSIDLDRQAIILNDG-EVHRKSPISKDISIMKFKSYTLQTES 232 I + A+S + D IL + + I+ + L T Sbjct: 182 IHAYSTAGGPVRRIIAESARL--DGSNWILTNAKSWPLTAGINPEAGAASHDELQLPTTL 239 Query: 233 ANSSTIVLKANDQNLS-FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 +S + L + + Y + L + LF + L+ Sbjct: 240 TTDRIRDTLGTASGISIYDLPATIRELSAAGFTTKRYEVRYQAELARPLFLIAMVLVG-- 297 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ 331 A+ R + +++ + FG+++ ++ E Sbjct: 298 ASFTMRHARFGGTGLAVLMAVLLGFGLYFIRNFAQILGEN 337 >gi|222148152|ref|YP_002549109.1| hypothetical protein Avi_1542 [Agrobacterium vitis S4] gi|221735140|gb|ACM36103.1| conserved hypothetical protein [Agrobacterium vitis S4] Length = 362 Score = 75.4 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 52/358 (14%), Positives = 119/358 (33%), Gaps = 16/358 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTES-LNILLKISGYLIPT 59 + + Y L+ + + + I ++I + S + +S L + ++ +P Sbjct: 3 LNTLSRYFLKRYAITVFWFVIGVAAIIFLIDFSEVSGRFSDNEQSSLFGVFLLTLMRLPL 62 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 +L PF L ++NR +EL+I G S + P L A +L + N Sbjct: 63 LLQQTVPFIALFSGMVTLITLNRRSELVIARAAGISVWQFMFPFLLGAFMLGCATSLLIN 122 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEEN----LFFRLDDDLYIKISKYNPNNT--LQGI 173 + + L A+ S + + +D I + + T +Q + Sbjct: 123 PLAALGQKQAATLEAEYSDPGKASNNKNSVPWMRQITGKEDTIIGATSVLEDGTLLMQAV 182 Query: 174 FIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 FI + A++ + +L D + K + + + + Sbjct: 183 FIHFDGQGRITSRQDARTAKLQDG--YWLLKDVVETKPGETPKRETSAQVST---NLKQE 237 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + + + L +Y + ++FH L+ V LI+ + Sbjct: 238 FVQERLAQPDTVAFYELSQKIAVAKSY-GVSTKNLETQFHTLLSTPFLFVAMTLIAATVS 296 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 K + Q + + I + F ++ + ++ + P + ++ I + L Sbjct: 297 LKFSRFNQSRSV--ILGGIISGFVLYVA-TVLVKAFGSSGVVPPFVATWVPVIVATAL 351 >gi|71891829|ref|YP_277558.1| putative transmembrane protein, transport [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71795935|gb|AAZ40686.1| putative transmembrane protein, transport [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 357 Score = 75.4 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 42/355 (11%), Positives = 124/355 (34%), Gaps = 5/355 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 YI++ + S L ++ ++ VI+++ + + S ++ +P Sbjct: 3 NILNYYIVKTVISSTTTVFLVLLSLSSVIKLIDELRKIGEGNHSFFDVIIYMILSLPKDF 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L + + E + + +G SR+ + V+ ++ + + IS I Sbjct: 63 ELFFPIATLLGGLLGLCMLEVHNEFIAMQISGFSRLQITLSVIKASVPVLLCSIISNEWI 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SRD 180 P + ++Q + ++ + +D + ++ + N L G+ + + + + Sbjct: 123 VPNSEKIMCMYRNQSQHDASLLSIKIKNLWFIDKNDFVCVENVIAYNELLGVKLYNFNEE 182 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDIS-IMKFKSYTLQTESANSSTIV 239 + KI Y + + L + S + ++ + + + S ++ Sbjct: 183 RKLKKICYIERAVFV--DKVWHLINVNELDISQKTSVVNKNIPHSKWNAELTPYRLSMMI 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 N ++S L + N + + Y+ F K++ + + ++++ Sbjct: 241 THPNFLSISKLYH-CAKYFNRIGQNSKYYQVIFWKKILSPISGSVMTIMALAFTFGPLYK 299 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 ++ + F + I+ I I + + + ++M Sbjct: 300 KKIGIRLFVGSIAGFLFYILNQIFGILSAIHSVSPIIGSISPSIIFLVISVIIMR 354 >gi|84500988|ref|ZP_00999223.1| permease, YjgP/YjgQ family protein [Oceanicola batsensis HTCC2597] gi|84391055|gb|EAQ03473.1| permease, YjgP/YjgQ family protein [Oceanicola batsensis HTCC2597] Length = 365 Score = 75.0 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 58/349 (16%), Positives = 126/349 (36%), Gaps = 21/349 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y R F+ + ++ +I + + + +SS+ +L+ +L++ P + Sbjct: 2 TLHYYFAWRFLRIFIGLLAVFLLMSMLIDVAEHLRRLSSTPATLSQVLRLVLLNAPEGIY 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + T + + R +EL++ G S + + + +A + + N I Sbjct: 62 TILPLIMILATVALFLGLARTSELVVTRAAGRSALRSLVSPVIVAFAIGVIGVAMVNPIV 121 Query: 123 PKCRSTIKQLSAKAQL--ALTFSYLEENLFFR---LDDDLYIKISKYNPNNT-LQGI-FI 175 L Q A S E L+ R + I+ ++ NP T L + I Sbjct: 122 AATSKRYAALLESYQSGGADVLSLSAEGLWLRQGGAEGQTVIRAARSNPQATELYDVTMI 181 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + D K A + A L+D + + + + + + + S+ + Sbjct: 182 AYAPDGGPEKRIEAARARLIAG--AWELHDARIWPLARGT-NPEARTERRESFEVPSSLT 238 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLET-YRSEFHK-----RLTQWLFPVIFGLIS 289 + + + P + P Y L E + + H L + LF V LI+ Sbjct: 239 EARIRDTFGEPSAI---PVWDMPTYIGLLTEAGFSARRHAVWFQMELAKPLFLVAMVLIA 295 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 AA VR K + ++ + F +++ +++ E + + Sbjct: 296 --AAFTMRHVRFGKTGIAVLSAIMLGFALYYVRNFVQILGENGQIPVAL 342 >gi|195941983|ref|ZP_03087365.1| hypothetical protein Bbur8_03799 [Borrelia burgdorferi 80a] Length = 429 Score = 75.0 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 42/207 (20%), Positives = 86/207 (41%), Gaps = 5/207 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 S+E YI+ + FL++ LF F+ ++ QIL + ++ + Y +P V+ Sbjct: 6 NSYESYIIAEFFKYFLITFLFFFFVFFINQILFFMRILLQNYVPFFKAFIFIIYSLPMVI 65 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF + + + E+L + G S L+ P L I+++ FIS +I+ Sbjct: 66 ALSPPFASLISVILTIHKFKLHNEILAFRSIGISIFDLLVPFFKLGIVIAFVSFISNDIL 125 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD- 180 P ++ + + + L+ + DL + + N + + D+ Sbjct: 126 LPLGSIGRLKIFNEIKEEVPHLVLKPYS-SKQYGDLIFVSGEKSENG-YKNVTFFDNTGL 183 Query: 181 TQTHKIYYAQSGSIDLDRQAI--ILND 205 +I+ A++ I + + ILND Sbjct: 184 KGFDRIFMAKNLDIRKENFQVYFILND 210 >gi|15595152|ref|NP_212941.1| hypothetical protein BB0807 [Borrelia burgdorferi B31] gi|221217627|ref|ZP_03589096.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi 72a] gi|225551663|ref|ZP_03772607.1| conserved hypothetical integral membrane protein [Borrelia sp. SV1] gi|226320854|ref|ZP_03796406.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi 29805] gi|2688742|gb|AAC67148.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi B31] gi|221192573|gb|EEE18791.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi 72a] gi|225371690|gb|EEH01116.1| conserved hypothetical integral membrane protein [Borrelia sp. SV1] gi|226233720|gb|EEH32449.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi 29805] Length = 429 Score = 75.0 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 42/207 (20%), Positives = 86/207 (41%), Gaps = 5/207 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 S+E YI+ + FL++ LF F+ ++ QIL + ++ + Y +P V+ Sbjct: 6 NSYESYIIAEFFKYFLITFLFFFFVFFINQILFFMRILLQNYVPFFKAFIFIIYSLPMVI 65 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF + + + E+L + G S L+ P L I+++ FIS +I+ Sbjct: 66 ALSPPFASLISVILTIHKFKLHNEILAFRSIGISIFDLLVPFFKLGIVIAFVSFISNDIL 125 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD- 180 P ++ + + + L+ + DL + + N + + D+ Sbjct: 126 LPLGSIGRLKIFNEIKEEVPHLVLKPYS-SKQYGDLIFVSGEKSENG-YKNVTFFDNTGL 183 Query: 181 TQTHKIYYAQSGSIDLDRQAI--ILND 205 +I+ A++ I + + ILND Sbjct: 184 KGFDRIFMAKNLDIRKENFQVYFILND 210 >gi|317153284|ref|YP_004121332.1| permease YjgP/YjgQ family protein [Desulfovibrio aespoeensis Aspo-2] gi|316943535|gb|ADU62586.1| permease YjgP/YjgQ family protein [Desulfovibrio aespoeensis Aspo-2] Length = 380 Score = 75.0 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 48/366 (13%), Positives = 114/366 (31%), Gaps = 16/366 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + Y+++ + I + + R++ + +L IP + Sbjct: 7 IGVLGRYLIQQNLYLMSICLTVGTCIYLLSDVFDRLDDFIKAGLGAETILFYFFVKIPLI 66 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P F + L + R+ E+L + G S IK L A+ S+ Sbjct: 67 VSQLMPAIFLLALVLQLGILTRSKEMLALRAGGVSFAWFIKFFLIYAMFWSLGQLAFSQF 126 Query: 121 IEPKCRSTI-KQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-- 177 + + + +L+FR + + Y + + + + Sbjct: 127 LGVFGEYEANRIWKEDVRKKQLDELTITDLWFRDGPFIVLAREAYPGKSRASDVVVYEFA 186 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPIS--KDISIMKFKSYTLQTESANS 235 + + + +I A+ ID + ++ +VH + + +F S ++ + Sbjct: 187 TDNQELIRILTAKKAMIDDNGWGLL----DVHELDTRTFVSVTRLSQFLSVRQNLKAYAA 242 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + L L +E R+ +H T+W + F + + Sbjct: 243 VELKGDTAQLPLLELSR-AIEKLEESGSNVEILRTIWH---TKWSY--AFSIAVMALLAL 296 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + I SL + F V +G + + P + +L L ++ Sbjct: 297 ALVTFSENIYANIGFSLILIF-VQYGVHAVGATAGEQAVLPPFVAAWLGNFVMAALAGMR 355 Query: 356 KKYTKI 361 + + Sbjct: 356 LAWVTV 361 >gi|216264700|ref|ZP_03436692.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi 156a] gi|223889298|ref|ZP_03623885.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi 64b] gi|224533066|ref|ZP_03673671.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi WI91-23] gi|225549397|ref|ZP_03770369.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi 94a] gi|225550295|ref|ZP_03771254.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi 118a] gi|215981173|gb|EEC21980.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi 156a] gi|223885219|gb|EEF56322.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi 64b] gi|224512002|gb|EEF82398.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi WI91-23] gi|225369163|gb|EEG98617.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi 118a] gi|225370025|gb|EEG99466.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi 94a] gi|312147984|gb|ADQ30643.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi JD1] gi|312149484|gb|ADQ29555.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi N40] Length = 429 Score = 75.0 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 42/207 (20%), Positives = 86/207 (41%), Gaps = 5/207 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 S+E YI+ + FL++ LF F+ ++ QIL + ++ + Y +P V+ Sbjct: 6 NSYESYIIAEFFKYFLITFLFFFFVFFINQILFFMRILLQNYVPFFKAFIFIIYSLPMVI 65 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF + + + E+L + G S L+ P L I+++ FIS +I+ Sbjct: 66 ALSPPFASLISVILTIHKFKLHNEILAFRSIGISIFDLLVPFFKLGIVIAFVSFISNDIL 125 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD- 180 P ++ + + + L+ + DL + + N + + D+ Sbjct: 126 LPLGSIGRLKIFNEIKEEVPHLVLKPYS-SKQYGDLIFVSGEKSENG-YKNVTFFDNTGL 183 Query: 181 TQTHKIYYAQSGSIDLDRQAI--ILND 205 +I+ A++ I + + ILND Sbjct: 184 KGFDRIFMAKNLDIRKENFQVYFILND 210 >gi|121730751|ref|ZP_01682851.1| conserved hypothetical protein [Vibrio cholerae V52] gi|121627676|gb|EAX60335.1| conserved hypothetical protein [Vibrio cholerae V52] Length = 289 Score = 75.0 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 41/294 (13%), Positives = 107/294 (36%), Gaps = 10/294 (3%) Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + L ++ ++EL+++ G S++ + VL AI L I + + P+ + Sbjct: 1 MAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIIVTLLGEWGAPQAQ 60 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 + + A A + ++ R +D +I I+K + + + Sbjct: 61 KMARDMRAFATSGGAIMSVRTGVWARDAND-FIFIAKVENEQLYGLNLWRFDENKKLSTV 119 Query: 187 YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--STIVLKAND 244 +++ + + ++ D + R +IS Y +T A + + +K + Sbjct: 120 IFSEQVDYVANNE-WLMKDAVLTRL-VNDIEISKESLPEYRWRTSLAPDKLAVVTVKPEE 177 Query: 245 QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS--IVAADKRALVRQR 302 +L+ L + + + Y +++TQ + + L++ + R++ Sbjct: 178 LSLTGLSD-YVHYLKASEQDSSRYELALWRKVTQPISIAVMMLMALSFIFGPLRSVTMGA 236 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + + + F + F + + P L L ++ L+ +K Sbjct: 237 RILSGVIAGFT--FYISSEFFGPLSLVYGLPPLFGALAPSLVFLAIALGLLGRK 288 >gi|34763638|ref|ZP_00144567.1| Hypothetical Membrane Spanning Protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27886691|gb|EAA23835.1| Hypothetical Membrane Spanning Protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 176 Score = 74.6 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 30/161 (18%), Positives = 69/161 (42%), Gaps = 1/161 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K ++YI + + FLM+ + + + + Q + I ++ + + L+P + Sbjct: 2 IKKMDIYISKYFIKFFLMNIIGFMGVFLLAQTFKIIKYINQGKLAGGEIFDYIINLLPKM 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 P + ++ M N E++ + +G + +++ L +A ++S+ +F N Sbjct: 62 FVETAPLSVLLAGLITISIMASNLEIVSLKTSGIRFLRIVRAPLIIAFVISLIVFFINNS 121 Query: 121 IEPKCRSTIK-QLSAKAQLALTFSYLEENLFFRLDDDLYIK 160 I K + I + +L +EN FF + D Y+ Sbjct: 122 IYTKSLAKINFYRRGEVDESLKLPTTKENAFFINNTDGYLY 162 >gi|255764469|ref|YP_003064807.2| putative permease protein [Candidatus Liberibacter asiaticus str. psy62] gi|254547820|gb|ACT56867.2| putative permease protein [Candidatus Liberibacter asiaticus str. psy62] Length = 361 Score = 74.6 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 58/363 (15%), Positives = 133/363 (36%), Gaps = 28/363 (7%) Query: 2 KSFELYILRCIGRS---FLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIP 58 Y + ++ FL+ + +VF+ + +I ++ + + + S +L + +P Sbjct: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVL--AATRVP 60 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 ++ + PF + V ++NR +EL+I G S L+ P + +ILL IF + Sbjct: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 Query: 119 NIIEPKCRSTIKQLSAKAQLALT---FSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI 175 N I L + + + D++I K P N + F Sbjct: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + D + I+ + + + L ++ I D + + + Sbjct: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT---LNIPIKMDGF 237 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSE--FHKRLTQWLFPVIFGLISIVAA 293 + ++ ++ + + + + YR+E F+ + L V LI+ + Sbjct: 238 QKFSEQFASRSFYEII--KKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFS-----YIIHKIEQNPYYIPILYLFLFCISS 348 + + Q + + +++G+F GF I+ ++ +P+ + I + Sbjct: 296 LEFSRSNQPR--------IIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILT 347 Query: 349 IFL 351 I L Sbjct: 348 ISL 350 >gi|227821475|ref|YP_002825445.1| permease YjgP/YjgQ family protein [Sinorhizobium fredii NGR234] gi|227340474|gb|ACP24692.1| permease YjgP/YjgQ family protein [Sinorhizobium fredii NGR234] Length = 360 Score = 74.6 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 58/138 (42%), Gaps = 5/138 (3%) Query: 1 MKSFELYILRCIGRS---FLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLI 57 + + Y + + FL+ ++FI ++ R++ + T S L ++ + I Sbjct: 3 LSTLGRYFFKRYIVTTFWFLVGIFALIFIIDFSELASRMSALPHYTVSGA--LLMTTFRI 60 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 PT+L PF L S+NR EL++ G S ++P + A L+ + ++ Sbjct: 61 PTILQQTVPFVALFSAMAALISLNRRYELVVTRAAGISVWQFLRPFVLGAFLVGVLAVVA 120 Query: 118 ENIIEPKCRSTIKQLSAK 135 N + + L A+ Sbjct: 121 LNPLAAWGTKRAEALEAE 138 >gi|289548597|ref|YP_003473585.1| permease YjgP/YjgQ family protein [Thermocrinis albus DSM 14484] gi|289182214|gb|ADC89458.1| permease YjgP/YjgQ family protein [Thermocrinis albus DSM 14484] Length = 351 Score = 74.6 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 54/316 (17%), Positives = 113/316 (35%), Gaps = 19/316 (6%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YILR ++F +S ++ + L L+ +SL I + +P Sbjct: 2 LQRYILRLYIKAFGLSSAVLLGTGVLY--LTFETLLVFRQKSLEIFFQYILLSLPVAFLY 59 Query: 64 VTPFCFAMETTNVLTSMNRNTELL-IIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++P + T L +L +I + G I L++PV+F +++LSI I Sbjct: 60 LSPIVSWIALTM-LIRFFIQRQLDRLIVSFGVPPIHLVRPVIFFSLVLSILHIYMSFQIY 118 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD---LYIKISKYN-PNNTLQGIFIVDS 178 P + ++ + + + + L ++ +F L D +Y I + T +F++ + Sbjct: 119 PSFQRSLYTIEKEYKKGKKDTLLIKDQWFALKDGEKVVYSHIGLADVSKGTAYDVFLLYT 178 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK--DISIMKFKSYTLQTESANSS 236 ++ A + ++ + D K + F +N Sbjct: 179 KEGSIEATLRASKAFWKGN--SLFIPDAYYEDLEKGGKFYGPMEVSF------LSLSNIR 230 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + K + L++ Y +E +RL L P++ I A KR Sbjct: 231 PLASKLEHITFTELIS-VYGMAERLGINRYAYLAEILRRLQLSLMPLLMVTIVARALLKR 289 Query: 297 ALVRQRKKIHPIFISL 312 + + ++L Sbjct: 290 RSLVEGSLYGGFSLAL 305 >gi|163788640|ref|ZP_02183085.1| hypothetical protein FBALC1_10402 [Flavobacteriales bacterium ALC-1] gi|159875877|gb|EDP69936.1| hypothetical protein FBALC1_10402 [Flavobacteriales bacterium ALC-1] Length = 340 Score = 74.6 bits (182), Expect = 3e-11, Method: Composition-based stats. Identities = 49/342 (14%), Positives = 118/342 (34%), Gaps = 7/342 (2%) Query: 20 CLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTS 79 L + I + + +++ + + + ++ P + + Sbjct: 2 LLLFIPIGITVDLAEKVGKILENKAPFGEVTAYYVDFTIYFANLLFPLFLFLSVIWFTSK 61 Query: 80 MNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLA 139 + NTE++ ++G S ++P L A +++IF + + P + K Sbjct: 62 LANNTEIVAFLSSGVSFTRFLRPYLIGATVVAIFALVLGMYLSPMASKGFNEFKFKYLKK 121 Query: 140 LTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI-YYAQSGSIDLDR 198 +++ +++D+ YI +S ++P + F + + K +A++ Sbjct: 122 NKQVQQTRDVYQQINDNDYIFVSSFSPKSKTGMKFTYEHIEGNELKYKIFAENIRYIEKD 181 Query: 199 QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNP 258 L + I + K E + + + A ++ LL+ Sbjct: 182 STYRLTTYVKRSFENGVERIEKERSKDMHFPFELEDLTPVQYAAETKSYGELLDFIAAEK 241 Query: 259 NYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGV 318 + Y K+ + + I +I++ ++ R+ + ++I+ Sbjct: 242 RRGSPNIGRYEVVKQKKWSLPVSIFILTIIAVAV---SSVKRRGGMGVNLAFGIAIAMIY 298 Query: 319 FWGFSYIIHKIEQN--PYYIPI-LYLFLFCISSIFLLMIKKK 357 + EQ P I + L FLF I +I+LL K+ Sbjct: 299 VFLDKIFGVMAEQANFPAVIAVWLPNFLFGILAIYLLQNAKR 340 >gi|126739400|ref|ZP_01755093.1| permease, YjgP/YjgQ family protein [Roseobacter sp. SK209-2-6] gi|126719500|gb|EBA16209.1| permease, YjgP/YjgQ family protein [Roseobacter sp. SK209-2-6] Length = 367 Score = 74.6 bits (182), Expect = 3e-11, Method: Composition-based stats. Identities = 56/351 (15%), Positives = 121/351 (34%), Gaps = 23/351 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 +LY R + FL+ ++ + +I + ++I + S +L ++ P + Sbjct: 2 KLDLYYARRFAQWFLVITGVLMTLVVLIDLSEQIRRFDAFDLSAGQILGLTLLNAPAAMN 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + T + + R++EL++ G S I + + +A L+ + + N I Sbjct: 62 EFLPLIMILTTIVLFVGLARSSELVVTRAIGRSGIRALAAPVLVAALIGVLAVSTLNPIV 121 Query: 123 PKCRSTIKQLSAKAQLALTF--SYLEENLFFR---LDDDLYIKISKYNPNNT---LQGIF 174 + K LS + S E L+ R + + Y L + Sbjct: 122 AATTNRYKSLSDSYRTGGPSVLSLTGEGLWLRQGSPSGQSVVHAAGYGGGREEIILYDVT 181 Query: 175 IVDSRDTQTHKIYY-AQSGSIDLDRQAIILNDGEVHRKSP-ISKDISIMKFKSYTLQTES 232 I+ + A+S ++ +L D +V S + +IS + + + T Sbjct: 182 ILTYGKDSGPRTRTQARSARLEGSD--WVLQDAKVWPLSAWTNPEISAGEHQELRIPTTL 239 Query: 233 ANSSTI-VLKAND----QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGL 287 L A+D +L + + Y+ E L + F + L Sbjct: 240 TQDRIRDRLDASDGISIYDLPQTIRELAEAGFATKKHEVWYQVE----LARPFFLIAMVL 295 Query: 288 ISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 + AA R + ++ + FG+++ ++ E + + Sbjct: 296 VG--AAFTMRHTRFGGTGMAVLTAVLLGFGLYFIRNFAQILGENGEIPVAL 344 >gi|254436833|ref|ZP_05050327.1| putative permease, YjgP/YjgQ family [Octadecabacter antarcticus 307] gi|198252279|gb|EDY76593.1| putative permease, YjgP/YjgQ family [Octadecabacter antarcticus 307] Length = 364 Score = 74.2 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 53/339 (15%), Positives = 117/339 (34%), Gaps = 16/339 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y R +F + + +I +++++ SL +L++S +P++L Sbjct: 2 ILHRYFARRFAWTFTATFGGFFVLMLLIDLVEQLRR-YGGEASLGDMLQLSLLKLPSLLY 60 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + T + R++EL++ G S + + L + +++ N + Sbjct: 61 DILPLIMVLATVATFLGLARSSELIVSRAAGRSALRALVAPLIVTVIIGAITIGVFNPLV 120 Query: 123 PKCRSTIKQLSAKAQLALTF--SYLEENLFFRLDDD---LYIKISKYNPNNT-LQGI-FI 175 + + + E L+ R DD I+ N + T LQ + FI Sbjct: 121 AATSKEFEARKTTLRSDAPSVLAISENGLWLRQGDDNSQTVIRAGGANLDGTQLQDVTFI 180 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 S+ + A + ++ + A L D +V ++ + TL+ S + Sbjct: 181 RFSKTGHPTRRIEAATANLTIG--AWDLTDAKV-WPLVGNRVAESVATIHTTLRIPSTLT 237 Query: 236 STIVLKANDQNLSFLLNPNP---NNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + + + S + P + ++ L Q F + LI A Sbjct: 238 ADEIRDSFGVPSSIAIWELPAFIDRLEVAGFSATRHQVWLQMELAQPAFLLAMVLIG--A 295 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ 331 R + + ++ I F +F+ ++ E Sbjct: 296 GFTMRHQRGGRTGVMVLAAILICFALFFLRNFAQILGEN 334 >gi|114331101|ref|YP_747323.1| permease YjgP/YjgQ family protein [Nitrosomonas eutropha C91] gi|114308115|gb|ABI59358.1| permease YjgP/YjgQ family protein [Nitrosomonas eutropha C91] Length = 352 Score = 74.2 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 53/360 (14%), Positives = 117/360 (32%), Gaps = 13/360 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YI + +++ + ++ + +L +++ V T + + L+P Sbjct: 1 MKICYRYIALQVLTGMIIATVVLLPLFSFFDLLDQLDDVGKGTYTTRDAFLYTAMLMPRR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + PF + T L + + EL+ + G S + + + + L E + Sbjct: 61 FIQIAPFIALLGTVGALGGLAVSLELVAMRVAGFSPLMISLAPIGIGGGLITSTIALEYL 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI-FIVDSR 179 + P+ + L A A ++ R + ++ ++I + I + + Sbjct: 121 VAPQFQQQAIVLRAVALEQSAELGKGLGIWTRNEQNI-LRIGEMLHKGRAIDIEVMHFDK 179 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ---TESANSS 236 +AQ I D+ L+D V +P I K + LQ Sbjct: 180 QGLMTAHIHAQYADI-FDKSMWKLHDVTVRMFAPD----RIFSRKVHALQWHSFLGPEDI 234 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + K + L + + + Y +++ + + LI+I Sbjct: 235 ATLTKPPESLTPLELLHHAEFLKMTGQKADAYVMALWRKVGSVVMTIAMILIAIPFIFG- 293 Query: 297 ALVRQRKKIHPIFISL-SISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 VR+ + SL IS + I + Q + + I +++ Sbjct: 294 -SVREGLGGKLVLASLMGISIYLLDQIIANIGLVFQLNPIVVSIAPGSILIVIAAYWLLR 352 >gi|157738400|ref|YP_001491084.1| hypothetical protein Abu_2200 [Arcobacter butzleri RM4018] gi|157700254|gb|ABV68414.1| conserved hypothetical membrane protein [Arcobacter butzleri RM4018] Length = 338 Score = 74.2 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 59/341 (17%), Positives = 121/341 (35%), Gaps = 21/341 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y+ + +F + FI VI +++ L + T + L +I Y IP ++ Sbjct: 2 KLQRYLYSQLAITFFPIFFGLFFITAVIFLVKISALTAIITVNFFELFRIFSYTIPDIIF 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P F + L+ ++ EL +I + G + ++K L L +LL++ L + + Sbjct: 62 YTMPISFFISMVITLSKLSSEYELTVITSFGLNPFKILKIFLPLTLLLTLLLLVVSVGLI 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 PK KQ + ++ F + D I I+ NN + + ++ + Sbjct: 122 PKSDFERKQFV-NIKKNEANFNIKSGEFGQKFGDWLIFINDK-KNNLYEDVKLLKVQKDN 179 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + +++ +D D + I + + K++ + E N Sbjct: 180 DQFVI-SKNAVLDNDNGVL---------------SIRLDEGKAFLIDKEEFNQINYEAMY 223 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV--R 300 + ++S + + + LT ++ F L+S+ R Sbjct: 224 INDSISTAKTTVFTTTYDYWKNNIKNKVDLDD-LTFFILTSFFPLMSLFLVITFGYFNPR 282 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL 341 K ++ +SI S Y IPIL+L Sbjct: 283 YEKNRAIMYSLISIVLYYVLIKSIGDKIFLHTLYIIPILWL 323 >gi|46199050|ref|YP_004717.1| hypothetical protein TTC0744 [Thermus thermophilus HB27] gi|55981077|ref|YP_144374.1| hypothetical protein TTHA1108 [Thermus thermophilus HB8] gi|46196674|gb|AAS81090.1| hypothetical conserved membrane spanning protein [Thermus thermophilus HB27] gi|55772490|dbj|BAD70931.1| conserved hypothetical protein [Thermus thermophilus HB8] Length = 368 Score = 74.2 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 25/212 (11%), Positives = 68/212 (32%), Gaps = 7/212 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+LR L++ LF+ + + L +L+ Y +P + Sbjct: 2 ILHRYLLRESLPVLLLALLFLTAVYLFGFFYAGARWL--EGVPLPKILRWLSYHVPGIWV 59 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 V P T V + + + G P++ + +LS + + Sbjct: 60 QVFPIALVTTTVLVFGRLAAEGAHFALLSAGIPLGRAALPLVAVGAVLSGLALYLQEYVV 119 Query: 123 PKCRSTIK-QLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSRD 180 P+ + ++ + + + + + + ++ + G+ I + Sbjct: 120 PEANNRVRVAWWDEIHTQGAGLFRLKGMQIPIGQGKSLYFQDFDMAAKEMVGVRIT-AFQ 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKS 212 + +A+ G+ + + + L D ++ Sbjct: 179 GEVGTFLFAERGT--WEDKTLTLKDYRYYQVD 208 >gi|254486546|ref|ZP_05099751.1| permease, YjgP/YjgQ family [Roseobacter sp. GAI101] gi|214043415|gb|EEB84053.1| permease, YjgP/YjgQ family [Roseobacter sp. GAI101] Length = 365 Score = 74.2 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 45/355 (12%), Positives = 120/355 (33%), Gaps = 11/355 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 LY R F++ + + ++ ++++ + L ++ P L Sbjct: 2 ILHLYFARRFVTGFVLISAVLFALLILVDMVEQARKFAEHDIGWQRLFGMTLLNTPETLN 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + T + S+ R++EL++ +G S ++ ++ +++A ++ I N I Sbjct: 62 LILPLIMILATVVLFLSLARSSELVVTRASGRSALSALQAPVWVAFIIGIMAVGMLNPIV 121 Query: 123 PKCRSTIKQLSAKAQLALTF--SYLEENLFFRLDDD---LYIKISKYNPN-NTLQGI-FI 175 QLS + S +E L+ R D I+ + N + + L + F+ Sbjct: 122 AATAKRYIQLSESIRAGGVSTLSISDEGLWLRQGGDQGQTVIRAWRSNADASVLYDVTFL 181 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGE-VHRKSPISKDISIMKFKSYTLQTESAN 234 + + A S +++ D + + + + + + Sbjct: 182 TYAAQGGPIRRIEASSAALEDDGWVLTGAKSWPLELGVNAEGNAEVFETLTLPSTLTLDR 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + ++ + L + ++ L + F + ++ + +A Sbjct: 242 IRESITDPGVVSI-YDLPGFIHQLELAGFSPRRHKVWLQTELARPFF--LVAMVLVASAF 298 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 R + S+ + FG+++ S+ E + + S + Sbjct: 299 TMRHTRFGGTGVAVLASVLLGFGLYFIRSFAQILGENGQIPVVLAAWAPPVASIL 353 >gi|115525295|ref|YP_782206.1| permease YjgP/YjgQ [Rhodopseudomonas palustris BisA53] gi|115519242|gb|ABJ07226.1| permease YjgP/YjgQ family protein [Rhodopseudomonas palustris BisA53] Length = 361 Score = 74.2 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 48/359 (13%), Positives = 113/359 (31%), Gaps = 16/359 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y + + L + + + + + ++ + S + +P +L Sbjct: 4 NTLGRYFAGKFVTAAVGVFLGLFVLLVFVDYIDLLRRSGGRAIPALLIAQTSMFRVPQLL 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PFC + +++R EL++ G S + P L+ A+LL F + N + Sbjct: 64 ERLMPFCILIGAMTCYLALSRRLELVVARAAGVSAWQFMAPALWSALLLGTFATMVFNPV 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLF----FRLDDDLYIKISKYNPNNT-LQGIFIV 176 + KQ A + S + + F + I S L G+ + Sbjct: 124 SANLQERAKQNEASMFGDSSGSLQDASGFWINQVNSEGQAIINASHSQQQGVLLTGLTVF 183 Query: 177 -DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + D A+ +++ + V R S + + + L T + Sbjct: 184 RFATDFSFKDRLEAREATLEPGFWRLK----SVRRYSLDAPPVEE---DTLLLPTTLTQA 236 Query: 236 STIVLKANDQNLSFLLNPN-PNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + + +SF P+ + YR ++HK L + ++ ++ + A+ Sbjct: 237 QVRNSFSTPETVSFWQLPSYIRSSESSGFATAGYRLQYHKLLARPF--LLAAMVMLAASV 294 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 R + + F ++ + + + + M Sbjct: 295 SLRFFRFGGVQKMVLSGVGAGFLLYILSKVTEDLSKAELMHPLAAAWLPVFVGGLAGFM 353 >gi|329943108|ref|ZP_08291882.1| hypothetical protein G5Q_0787 [Chlamydophila psittaci Cal10] gi|332287690|ref|YP_004422591.1| conserved hypothetical membrane protein [Chlamydophila psittaci 6BC] gi|313848264|emb|CBY17265.1| conserved hypothetical membrane protein [Chlamydophila psittaci RD1] gi|325506627|gb|ADZ18265.1| conserved hypothetical membrane protein [Chlamydophila psittaci 6BC] gi|328814655|gb|EGF84645.1| hypothetical protein G5Q_0787 [Chlamydophila psittaci Cal10] gi|328914943|gb|AEB55776.1| YjgP/YjgQ family protein [Chlamydophila psittaci 6BC] Length = 357 Score = 74.2 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 47/320 (14%), Positives = 105/320 (32%), Gaps = 21/320 (6%) Query: 40 SSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITL 99 + +L+++ Y IP +LP + P + + ++ N ++ + +G S+ + Sbjct: 39 IAKDVPYPTVLRLTAYQIPYLLPFILPISCFISAFTLFRGLSDNNQITFLKASGASQAII 98 Query: 100 IKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI 159 PVL ++ + F + + + CR + A + L+ + + + Sbjct: 99 TFPVLMVSCAICCVNFYTCSELASICRFQTCKEIANMAMTSPTLLLQ--TLQKKESNRIF 156 Query: 160 KISKYNPNNTLQGIFIVDSRDTQTHK-----IYYAQSGSIDLDRQAIILNDGEVHRKSPI 214 + + + I RD + + + + +++ + + Sbjct: 157 ITVDHCAKSKFDNVIIALKRDKEIANVGLIKTIIPDVANDTVQARGVVM----ISKLPST 212 Query: 215 SKDISIMKFKSY---TLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSE 271 D K Y TL T L A + + P + TY E Sbjct: 213 LTDQRSSNSKEYYIETLDEMLIPKITSTLFAGKSYMKTRTDYLPWKQLVKQSFSRTYLPE 272 Query: 272 FHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ 331 +R+ L + +V + R+ I+L F V I+ K Sbjct: 273 TLRRIGIGLLCITLTYSGMVLGTYKPRFRKS-------ITLYCIFPVIDLILLIVGKNTS 325 Query: 332 NPYYIPILYLFLFCISSIFL 351 + + +L++F +S I Sbjct: 326 SLFPALMLFIFPQVVSWIVF 345 >gi|257457658|ref|ZP_05622825.1| conserved hypothetical protein [Treponema vincentii ATCC 35580] gi|257445044|gb|EEV20120.1| conserved hypothetical protein [Treponema vincentii ATCC 35580] Length = 229 Score = 73.8 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 42/203 (20%), Positives = 84/203 (41%), Gaps = 3/203 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K LYI++ + F + LF+ FI +V IL V S + + Y +P V+ Sbjct: 7 KLLFLYIVKEMLLYFFVCFLFLFFIFFVNNILLLAEDVLSKQAPFKDVALLMLYSLPAVI 66 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PF + T + + E L ++ G S L+ PVL + +L+SI F + +++ Sbjct: 67 ANAAPFAALIGTLMGIGRFVSDLEFLSMNALGISPRFLMVPVLLVGLLVSIVSFFTNDVL 126 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P +++ + L + + + ++ + + + IVD Sbjct: 127 LPASAVNFRRVYWDIATSTPALELA--SYSVKRNRNAVVVTGLIKDGRIHNLLIVDKNAD 184 Query: 182 QTHKIYYAQSGSID-LDRQAIIL 203 + +I Q+ I+ D +I++ Sbjct: 185 KAFRILGTQTAEIEKSDDPSIVM 207 >gi|304321347|ref|YP_003854990.1| putative permease [Parvularcula bermudensis HTCC2503] gi|303300249|gb|ADM09848.1| predicted permease [Parvularcula bermudensis HTCC2503] Length = 364 Score = 73.8 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 46/344 (13%), Positives = 108/344 (31%), Gaps = 11/344 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPT 59 M Y+ + L L I I + +++ + ++ L+++ P Sbjct: 1 MTVTFGYLAKRTLGGVLGLLLVIWLIVVSVDLIEAMRDIARIPGAGPIAALRLTLLRTPQ 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ ++PF F T M R +E+ ++ G S LI P + LA+ + + + + Sbjct: 61 LILSLSPFIFLFGTLWAYGQMARMSEIAVLRAAGLSVWRLIFPPVILAVAAGLLIATTLD 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFR----LDDDLYIKISKYNPNN--TLQGI 173 + + T + + +A+ + +L+ R D + + ++ N L+ + Sbjct: 121 PLAARLAETAQTVKNEARSGEEAAAKRPHLWLRQNEIGSDGIALLHAERYRENDPVLEEV 180 Query: 174 FIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 + R I + +D Q + L S + I + + Sbjct: 181 TVW-RRTQDGAFIERLDAPRALIDAQVLRLMQA-RRSTSIATTAPQIEAEIEVPVAIDLR 238 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 A+ ++ L +R +H + L +++ A Sbjct: 239 LLDQDRQTADTLSVWAL-PETIRLMGDAGMTTTKFRLRYHALWSLPLKLAAMVILACAFA 297 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP 337 R + + + F +F E + Sbjct: 298 L-GMNARGGGTALLMGMGILAGFLLFILSELSAAIAEAAIVPVG 340 >gi|163739705|ref|ZP_02147113.1| permease YjgP/YjgQ [Phaeobacter gallaeciensis BS107] gi|163743162|ref|ZP_02150544.1| permease, YjgP/YjgQ family protein [Phaeobacter gallaeciensis 2.10] gi|161383579|gb|EDQ07966.1| permease, YjgP/YjgQ family protein [Phaeobacter gallaeciensis 2.10] gi|161386935|gb|EDQ11296.1| permease YjgP/YjgQ [Phaeobacter gallaeciensis BS107] Length = 367 Score = 73.8 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 52/368 (14%), Positives = 122/368 (33%), Gaps = 24/368 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + + Y R + F + C ++ + +I + ++I + SL L ++ P L Sbjct: 2 TLDFYYARRFLQWFAVICGVLLTLVMLIDLNEQIRRFEAQDLSLGQLFGLTLLNTPAALS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + T + + R++EL++ G S I + + LA L+ + + N I Sbjct: 62 EFLPLIMILTTIVLFIGLARSSELVVTRAIGRSGIRALAAPVLLAALIGVLAVSTLNPIV 121 Query: 123 PKCRSTIKQLSAKAQLALTF--SYLEENLFFRLDD---DLYIKISKYNPNN---TLQGIF 174 + + L+ + S E L+ R I + Y+ + TL + Sbjct: 122 AATSNRYRDLAETYRNGGPAALSLTGEGLWLRQGGAQGQSVIHATGYSGDTDDITLYDVT 181 Query: 175 IVDSRDTQTHKIYY-AQSGSIDLDRQAII------LNDGEVHRKSPISKDISIMKFKSYT 227 I+ A+ ++D +I L G ++ S ++ + Sbjct: 182 ILSYGPEGRPIRQTLAEEAALDGGDWVLIKAKVWPLIVGV--NPETNAERHSTLRLSTTL 239 Query: 228 LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGL 287 ++ + +L + + E L + LF + L Sbjct: 240 TSERIRDTLGTATGISVYDLPATIRELSEAGFSTKRYEVWLQVE----LARPLFLIAMAL 295 Query: 288 ISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL-YLFLFCI 346 + AA R + ++ + FG+++ ++ E + + + Sbjct: 296 VG--AAFTMRHARFGGTGLAVLTAVLLGFGLYFLRNFAQILGENGQIPVALAGWAPPVAA 353 Query: 347 SSIFLLMI 354 + + ++ Sbjct: 354 ILLTMGLL 361 >gi|116251334|ref|YP_767172.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841] gi|115255982|emb|CAK07063.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae 3841] Length = 362 Score = 73.8 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 48/360 (13%), Positives = 116/360 (32%), Gaps = 22/360 (6%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTV 60 + Y R + + + I++++ + +S ++ + ++ +P + Sbjct: 4 GTLSRYFFRRYLVTTGWFLIGVSAISFLLDFSETAGRMSGLPGYTIGGGVLMTAVRLPLI 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L PF VL +NR EL++ G S + P + ++ L + + N Sbjct: 64 LQQTVPFIALFVGMTVLIGLNRKYELVVTRAAGISVWQFMFPFIAGSLALGLLTMAALNP 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEEN----LFFRLDDDLYIKISKYNPNNT--LQGIF 174 + + + + + DD+ I N T + + Sbjct: 124 LAAWGQRQALLVESDWRGENAVLRKAPQIPWLRQISGRDDVIIGAQTVQENGTKLIDAVL 183 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 I Q A + L DG + + + + + ++Q + Sbjct: 184 IHFDSSGQVILRQDAATAK---------LEDGYWQLNTVVERKPGEIPVRKASVQLRTNL 234 Query: 235 SSTIV---LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 V L A + F L+ + ++F+ L+Q L V I+ Sbjct: 235 KQDFVQERLTAPETIGFFDLSNRIAAAKSFGISTKALETQFNSLLSQPLLLVAMTFIAAT 294 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + K + Q + + I + F ++ + ++ + P + ++ + ++ L Sbjct: 295 VSLKFSRFNQSRSV--ILGGILSGFMLYVI-TVLVKAFGSSGVVPPFVATWIPVVVALAL 351 >gi|255349244|ref|ZP_05381251.1| putative membrane transport protein [Chlamydia trachomatis 70] gi|255503781|ref|ZP_05382171.1| putative membrane transport protein [Chlamydia trachomatis 70s] gi|255507462|ref|ZP_05383101.1| putative membrane transport protein [Chlamydia trachomatis D(s)2923] gi|289525885|emb|CBJ15367.1| putative membrane transport protein [Chlamydia trachomatis Sweden2] gi|296435471|gb|ADH17649.1| putative membrane transport protein [Chlamydia trachomatis E/150] gi|296439188|gb|ADH21341.1| putative membrane transport protein [Chlamydia trachomatis E/11023] Length = 354 Score = 73.8 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 50/321 (15%), Positives = 117/321 (36%), Gaps = 20/321 (6%) Query: 40 SSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITL 99 + + K++ Y IP +LP + P + + ++ N ++ + +G S+ + Sbjct: 39 IAKDVPYATVFKVTAYQIPYLLPFILPVSCFISAFTLFRKLSDNNQITFLKASGASQGMI 98 Query: 100 IKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI 159 I PVL + +L F F + + + CR + A + L+ + ++D Sbjct: 99 IFPVLIASGVLCCFNFYTCSELASICRFQTGKEIANIAMTSPALLLQ--TLQKKENDRIF 156 Query: 160 KISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSP---ISK 216 + + + I + + I + ++ D+++ ++ + V K P ++ Sbjct: 157 IAIDHCGKSKFDNVIIALKHNQEISNIGFIETIIPDVNKDSVQAKNVLVISKIPLFSEAR 216 Query: 217 DISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYR---SEFH 273 + +F TL T L A + + +L++ R +E Sbjct: 217 TSNPNEFYLETLDEFLIPKITATLFAGKSYM-----KTRTDYLPWKQLIQDARLHLAEIL 271 Query: 274 KRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP 333 +R+ L + + R+ I+ +F L++ F + + K +P Sbjct: 272 RRIAIGLLCSTMTFSGLALGTYKPRFRKPVLIYALFPILNLIFLI-------VGKNTIHP 324 Query: 334 YYIPILYLFLFCISSIFLLMI 354 +L+LF +S + Sbjct: 325 ISAVMLFLFPQLLSWLIFSWR 345 >gi|86357091|ref|YP_468983.1| putative permease protein [Rhizobium etli CFN 42] gi|86281193|gb|ABC90256.1| putative permease protein [Rhizobium etli CFN 42] Length = 362 Score = 73.5 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 46/361 (12%), Positives = 114/361 (31%), Gaps = 24/361 (6%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTV 60 + Y R + + IA+++ + +S ++ + ++ +P + Sbjct: 4 GTLSRYFFRRYLATTGWFLIGASAIAFLLDFSETAGRMSGLPGYTIGGGIVMTAVRLPLI 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L PF VL +NR EL++ G S + P + +++L + + N Sbjct: 64 LQQTIPFVALFVGMTVLIGLNRKYELVVTRAAGISVWQFMFPFIAGSLVLGVLTTTALNP 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEEN----LFFRLDDDLYIKISKYNPNNT--LQGIF 174 + + + + + DD+ I N T + + Sbjct: 124 LAAWGQRQALLVESDWRGENAVLRKAPQIPWLRQISGRDDVIIGAQTVQENGTKLIDAVL 183 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI----SKDISIMKFKSYTLQT 230 I + A + ++ + +G V RK + + Sbjct: 184 IHFDSSGRVILRQDAATAKLEDGYWQL---NGVVERKPGEIPLRKASVQLRT------NL 234 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 + + L N ++ + ++F+ L+Q L V LI+ Sbjct: 235 KQDFVQERLTAPETIGFFDLSNRIAAAKSF-GISTKALETQFNSLLSQPLLLVAMTLIAA 293 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 + K + Q + + I + F ++ + ++ + P + ++ + ++ Sbjct: 294 TVSLKFSRFNQSRSV--ILGGILSGFMLYVI-TVLVKAFGSSGVVPPFVATWIPVVVALA 350 Query: 351 L 351 L Sbjct: 351 L 351 >gi|23013662|ref|ZP_00053531.1| COG0795: Predicted permeases [Magnetospirillum magnetotacticum MS-1] Length = 312 Score = 73.5 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 49/319 (15%), Positives = 100/319 (31%), Gaps = 32/319 (10%) Query: 54 GYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIF 113 +P +L + PF + + R EL++ G S I PVL +A + IF Sbjct: 3 FLKLPQMLHTILPFAVMIGAMVCFWRLTRTHELVVARAAGISAWQFITPVLAVAGMFGIF 62 Query: 114 LFISENIIEPKCRSTIKQLSAK--AQLALTFSYLEENLFFRLDDD---LYIKISKYNPNN 168 + N + S ++L + A + F E L+ R D + + Sbjct: 63 EITTFNPMAAAMYSRYERLQDELLAAKSSAFDISEVGLWLREPHDDGEMVVHSETVRQEG 122 Query: 169 TLQGI-----FIVDSRDTQTHKIYYAQSGSIDLD----RQAIILNDGEVHRKSPISKDIS 219 + I F+ D D ++ A++ S++ R+A ++ G+ + + Sbjct: 123 LVLHIRDAHFFLYDRPD-HFYQRIAAETASLEDGAFEVRRAWVMEGGKPSVFKEKMRIPT 181 Query: 220 IMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQW 279 + S + + +R L Sbjct: 182 QLTLDRIHDNFASPETLSFWQLPGFIRFFE----------RAGFTANKHRLYLQSLLASP 231 Query: 280 LFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVF------WGFSYIIHKIEQNP 333 + L++ V + + R + I ++ F V+ + + Sbjct: 232 VLYCGMVLMAAVFSLRP-NTRSGGLLARIGGGVAAGFAVYFFSKVIYALGLSATLPQTLA 290 Query: 334 YYIPILYLFLFCISSIFLL 352 + P L+ L +S +F L Sbjct: 291 AWTPPLFAGLIGLSGLFHL 309 >gi|110680307|ref|YP_683314.1| YjgP/YjgQ family permease [Roseobacter denitrificans OCh 114] gi|109456423|gb|ABG32628.1| permease YjgP/YjgQ family, putative [Roseobacter denitrificans OCh 114] Length = 365 Score = 73.5 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 48/358 (13%), Positives = 117/358 (32%), Gaps = 12/358 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 LY R L++ + + + ++ ++ + + S + ++ P + Sbjct: 2 ILHLYFARRFASWLLIAFIALSALIALVDLVDQTRRFADRGVSATGIFELVILNTPQTIS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + T S+ R++EL+ +G S + + + + ILL + N I Sbjct: 62 QILPLIVLLATVAFFLSLARSSELIATRASGRSAMGALVAPVSVVILLGTLATTTLNPIV 121 Query: 123 PKCRSTIKQLSAKAQLALTF--SYLEENLFFR---LDDDLYIKISKYNPN-NTLQGI-FI 175 +LS + S E L+ R D + I+ + NP+ + L + F+ Sbjct: 122 AATSKKYNELSQIYRTGGVSTLSISTEGLWLRQATDDGQMVIRAWRSNPDASVLFDVTFL 181 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAII-LNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + +A S + + + D + R + + + + Sbjct: 182 AYEVIGTPVRRIHADSAELKDGAWLLRNVKDWPLARGINSEGNATEHRSLTIPSSLTVER 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + ++ + + N +R L + LF V LI+ +A Sbjct: 242 IRESFGHPSTISIWEMTD-FIKQLNQAGFSSLQHRVWLQSELARPLFLVAMVLIA--SAF 298 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFL 351 R + ++ + F +++ S+ + E + + + + Sbjct: 299 TMRHTRFGGTGVAVLAAVLLGFALYFVRSFGLILGENGQLPVYLAAWAPPIASVLLAF 356 >gi|163868027|ref|YP_001609231.1| hypothetical protein Btr_0826 [Bartonella tribocorum CIP 105476] gi|161017678|emb|CAK01236.1| hypothetical transmembrane protein [Bartonella tribocorum CIP 105476] Length = 363 Score = 73.5 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 50/359 (13%), Positives = 107/359 (29%), Gaps = 21/359 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + Y + I +A +I + + S + +S IP ++ Sbjct: 5 TLGRYFFIRYLKITCYFWGSIFVLALLIDFTENSGRLPSLPHYTAKDAFLLSVLRIPFIM 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF L S+N+ EL++ + G S + P A LL +F + N + Sbjct: 65 QQLIPFIALFSAMTTLISLNKKLELVVTRSIGVSAWQFLMPACLGAFLLGLFSILLINPL 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLF-----FRLDDDLYIKISKYNPNN--TLQGIF 174 S +++ + + + L I L F Sbjct: 125 AAWGFSQAEKMMTEWRNNNVLTSLHNTRIHWLTQRTDLGRTTIGAKFITDQGFSLLDATF 184 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + D ++ A L +G +++ + +++K K+ + Sbjct: 185 VQYKDDATVKNWINTPKATL--THGAWFLTNGTIYKIGHPPEKFTVLKIKT---NLKPEF 239 Query: 235 SSTIVLKANDQNLSFL--LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + ++ L + Y + Y + V LI+ A Sbjct: 240 LTERLVNPATIPFYQLPKKIMIARSFGYSAHNFDMYLQSL---IALPALLVAMTLIA--A 294 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 R + I + F ++ S ++ Y PI+ + + ++FL Sbjct: 295 TVSLNFTRFGQSRTLILGGVIAGFMLYVI-SVLVQAFGNAGYIPPIIAAWTPVVIALFL 352 >gi|269302797|gb|ACZ32897.1| putative permease, YjgP/YjgQ family [Chlamydophila pneumoniae LPCoLN] Length = 357 Score = 73.5 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 46/325 (14%), Positives = 112/325 (34%), Gaps = 13/325 (4%) Query: 40 SSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITL 99 + + +L++ Y IP +LP + P + ++ ++ N ++ + +G S+ + Sbjct: 39 IAKDVPYDTVLRLMAYQIPYLLPFILPGSCFVSAFSLFRKLSDNNQMTFLRASGASQSII 98 Query: 100 IKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI 159 + PVL ++ + F + + + CR + A + L+ + +++ Sbjct: 99 MFPVLMVSGAICCLNFYTCSELASICRYQTCKEIANMAMTSPALLLQ--TLQKKENNRIF 156 Query: 160 KISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD-- 217 + + + + + + + +S D + + D K P S Sbjct: 157 IAVDHCAKSKFDNVIVALKGNNEISHVGIIKSIIPDTTKDTVKAKDVVFISKLPDSLTES 216 Query: 218 --ISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKR 275 S +F TL T L A L + P + L ++ E +R Sbjct: 217 SSPSSQRFYIETLDELLIPKITSTLFAGKSYLKTRTDYLPWKQLVKQSLKHSHLPETLRR 276 Query: 276 LTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY 335 + + ++ + R+ I+L F + I+ K +N Sbjct: 277 VAIGFLCITLTYAGMILGIHKPRFRKS-------IALYFIFPILDLILLIVGKNTKNLPL 329 Query: 336 IPILYLFLFCISSIFLLMIKKKYTK 360 +L++F +S + + ++ Sbjct: 330 AFMLFVFPQLVSWVVFAARAYRESR 354 >gi|327188011|gb|EGE55241.1| putative permease protein [Rhizobium etli CNPAF512] Length = 362 Score = 73.5 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 46/361 (12%), Positives = 113/361 (31%), Gaps = 24/361 (6%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTV 60 + Y R + + IA+++ + +S ++ + ++ +P + Sbjct: 4 GTLSRYFFRRYLATTGWFLIGASAIAFLLDFSETAGRMSGLPGYTIGGGIVMTAVRLPLI 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L PF VL +NR EL++ G S + P + ++ L + + N Sbjct: 64 LQQTIPFVALFVGMTVLIGLNRKYELVVTRAAGISVWQFMFPFIAGSLALGVLTTTALNP 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEEN----LFFRLDDDLYIKISKYNPNNT--LQGIF 174 + + + + + DD+ I N T + + Sbjct: 124 LAAWGQRQALLVESDWRGENAVLRKAPQIPWLRQISGRDDVIIGAQTVQENGTKLIDAVL 183 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI----SKDISIMKFKSYTLQT 230 I + A + ++ + +G V RK + + Sbjct: 184 IHFDSSGRVILRQDAATAKLEDGYWQL---NGVVERKPGEIPLRKASVQLRT------NL 234 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 + + L N ++ + ++F+ L+Q L V LI+ Sbjct: 235 KQDFVQERLTAPETIGFFDLSNRIAAAKSF-GISTKALETQFNSLLSQPLLLVAMTLIAA 293 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 + K + Q + + I + F ++ + ++ + P + ++ + ++ Sbjct: 294 TVSLKFSRFNQSRSV--ILGGILSGFMLYVI-TVLVKAFGSSGVVPPFVATWIPVVVALA 350 Query: 351 L 351 L Sbjct: 351 L 351 >gi|241203948|ref|YP_002975044.1| permease YjgP/YjgQ family protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857838|gb|ACS55505.1| permease YjgP/YjgQ family protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 362 Score = 73.5 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 47/360 (13%), Positives = 117/360 (32%), Gaps = 22/360 (6%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTV 60 + Y R + + + I++++ + +S ++ + ++ +P + Sbjct: 4 GTLSRYFFRRYLVTTGWFLIGVSAISFLLDFSETAGRMSGLPGYTIGGGVLMTAVRLPLI 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L PF VL +NR EL++ G S + P + +++L + + N Sbjct: 64 LQQTVPFIALFVGMTVLIGLNRKYELVVTRAAGISVWQFMFPFIAGSLVLGLLTMAALNP 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEEN----LFFRLDDDLYIKISKYNPNNT--LQGIF 174 + + + + + DD+ I + T + + Sbjct: 124 LAAWGQRQALLVESDWRGENAVLRKAPQIPWLRQISGRDDVIIGAQTVQESGTKLIDAVL 183 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 I Q A + L DG + + + + + ++Q + Sbjct: 184 IHFDSSGQVILRQDAATAK---------LEDGYWQLNNVVERKPGEIPVRKASVQLRTNL 234 Query: 235 SSTIV---LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 V L A + F L+ + ++F+ L+Q L V I+ Sbjct: 235 KQDFVQERLTAPETIGFFDLSNRIAAAKSFGISTKALETQFNSLLSQPLLLVAMTFIAAT 294 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + K + Q + + I + F ++ + ++ + P + ++ + ++ L Sbjct: 295 VSLKFSRFNQSRSV--ILGGILSGFMLYVI-TVLVKAFGSSGVVPPFVATWIPVVVALAL 351 >gi|319898730|ref|YP_004158823.1| hypothetical protein BARCL_0559 [Bartonella clarridgeiae 73] gi|319402694|emb|CBI76240.1| conserved membrane protein of unknown function [Bartonella clarridgeiae 73] Length = 363 Score = 73.1 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 51/360 (14%), Positives = 110/360 (30%), Gaps = 23/360 (6%) Query: 3 SFELYILRCIGRS---FLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPT 59 + Y + FL+ + + + R+ L+ ++ IS IP Sbjct: 5 TLGRYFFVLYLKKICYFLLGVFILTLLIDFTENSSRLELLP--HYTVKGAFLISLLRIPF 62 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ + PF +L S+N+ EL++ + G S + P F A LL +F + N Sbjct: 63 IMQQLFPFIALFSAMTMLISLNQKLELVVARSIGISAWQFLMPACFGAFLLGLFSILFVN 122 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLF-----FRLDDDLYIKISKYNPNN--TLQG 172 + S +++ A + I + Sbjct: 123 PLAAWSSSQAEKMIAAWRSNNIEISTSNTRIPWLTQQTNLGRTTIGAKSITHQGLSLIDA 182 Query: 173 IFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 IF+ + + + ++ A +L +G +++ + KF L+T Sbjct: 183 IFVQYNENATVKNWINTKKATL--TNGAWLLTNGTIYKIGQTPE-----KFTELRLKTHL 235 Query: 233 ANSSTIVLKANDQNLSFLLNPNP-NNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 A+ + F P + + + V LI+ Sbjct: 236 KPEFLTEHLADPVTIPFYKLPEKIAVARSFGYSANKFDMHLQSLIASPILLVAMTLIA-- 293 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 A R + I + F ++ S ++ Y PI+ ++ + ++ Sbjct: 294 ATVSLKFTRFGQSRTLILGGVIAGFILYVI-SVLVRSFGNAGYIPPIIAAWVPVVVALSF 352 >gi|225849792|ref|YP_002730026.1| putative permease, YjgP/YjgQ family [Persephonella marina EX-H1] gi|225646703|gb|ACO04889.1| putative permease, YjgP/YjgQ family [Persephonella marina EX-H1] Length = 356 Score = 73.1 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 52/366 (14%), Positives = 133/366 (36%), Gaps = 15/366 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + Y+ + + L+ F+A + ++++ + + + L Y +P Sbjct: 1 MRILDRYLYKKLTVYLLVVLPSFSFVAVLAELIEVLRK--AKQLDIYYLSLYILYQLPEK 58 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + + + + E+ I G S +L + + LS I+ + Sbjct: 59 VYYILPISAVIAFILLAKDLIESKEIYPILLNGISLKSLATKLFIFPLFLSFLQIINLEL 118 Query: 121 IEPKCRSTIKQLSAKAQLALTFS---YLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD 177 I P + ++++ + + N + LD Y+ + N I Sbjct: 119 IMPTAKKEVEKVYSILKNRPPEEEKYLFAYNRWITLDSKSYMYFRFLDFNKREGKDLIFI 178 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 D + + + + ++I++ +G++ S I + +FK++ + Sbjct: 179 QFDENYNPVLRIEGNRFKIKGRSILIQNGKIIDLSDI-FSFNYRRFKTFDFPVAVDIKNL 237 Query: 238 IVLKANDQNLSFL-LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 L + +S L L + Y S+F+ +L +I ++ R Sbjct: 238 KKLVKVKKPVSILQLYRSAVIAEKFGYPAGYYWSKFYSKLATVFSALILSIVVFPFLWSR 297 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIK 355 + +FI+ + ++G ++I E YI +L++ L + + K Sbjct: 298 KKDK-------LFIAFASIIVYWYGTAFIASMAESGAVPYITVLFVDLVYLMVGLFFLSK 350 Query: 356 KKYTKI 361 +++++ Sbjct: 351 LRFSEL 356 >gi|149173512|ref|ZP_01852142.1| hypothetical protein PM8797T_22248 [Planctomyces maris DSM 8797] gi|148847694|gb|EDL62027.1| hypothetical protein PM8797T_22248 [Planctomyces maris DSM 8797] Length = 388 Score = 73.1 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 55/391 (14%), Positives = 133/391 (34%), Gaps = 47/391 (12%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTES---------------- 45 +F+ Y+L+ F++ + + V I+ + E Sbjct: 6 TTFDRYLLKRYFHVFVIGFIATYGLYVVFDGFTNIDGFQAGAEKVSSNDLNGLEVDQNAS 65 Query: 46 ---LNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKP 102 L I+L+ Y M++P + V + M R+ EL + + G L P Sbjct: 66 TSLLWIMLEFYFYQSSLFFDMISPILSVLAGVVVFSLMVRHGELNPVLSAGIPTYRLAIP 125 Query: 103 VLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEE-NLFFR--LDDDLYI 159 + I+++ + +++ +I P ++ + ++E F + + + Sbjct: 126 LAMATIIVNCVMCLNQEVIIPSIADKLQAERGDMASS--AQFVEPVYDFSTRIMINGQEV 183 Query: 160 KISK---YNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK 216 +++ N L + D ++ Y + + +P + Sbjct: 184 FLTEQKMKNAEFVLSKPMVHDFVTVKSDTAIYQTPTQTRPGGWLL-------KQATPSYQ 236 Query: 217 DISIMKFKSYTLQTESANSSTIVL------KANDQNLSFLLNPNP-----NNPNYRPELL 265 ++ I +F +Q + ++ + ++N S L++ + NNP++ + Sbjct: 237 ELEIAEFAREIIQPGPEPNEIFIVTDVGCDQLCNRNFSSLISTSDLIARINNPSFSDLSI 296 Query: 266 ETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYI 325 + + H RLT+ + +I LISI ++ I + FG+ F Y+ Sbjct: 297 RKQKLDLHSRLTRPIMNLIAVLISIPFVLRKESRSLILNIAICACVMGGLFGISQCFLYM 356 Query: 326 IHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 +P + + ++ + Sbjct: 357 GSTKLISPDQAA--WFPVITNGTLAAWFTNR 385 >gi|89054304|ref|YP_509755.1| permease YjgP/YjgQ [Jannaschia sp. CCS1] gi|88863853|gb|ABD54730.1| permease YjgP/YjgQ [Jannaschia sp. CCS1] Length = 364 Score = 73.1 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 54/364 (14%), Positives = 116/364 (31%), Gaps = 19/364 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 LYI R SF + + I I + ++ + S + + +L+++ +P + Sbjct: 2 ILHLYIARRFLVSFGIVLAVFMAILLPIDMADQLRRIGSD-QGFSAVLQLALLNLPRSIT 60 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + T + + R +EL+++ G S + + +A+++ + N + Sbjct: 61 GLMPLFVMLATLVLFLGLARTSELVVVRAAGRSALKSAASPVIVALIIGGLSLLILNPLV 120 Query: 123 PKCRSTIKQLSAKAQ--LALTFSYLEENLFFRLDDD---LYIKISKYNPNNTLQGIFIVD 177 A+ + + S E + R I+ S N + T + D Sbjct: 121 ATTARQYDLTLARLSGLESRSVSVTGEGFWLRQGTGSEQTVIRASATNSDGT----HLFD 176 Query: 178 SR----DTQTHKIYYAQSGSIDLDRQAIILNDGEVH-RKSPISKDISIMKFKSYTLQTES 232 + D + + L R A L D + + + F + TL + Sbjct: 177 ASFFTFDADGALLERMDAREAVLARAAWTLTDVKRWPLAQSDNAEADAELFPTLTLPSTL 236 Query: 233 ANSSTIVLKANDQNLSFLLNPN-PNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 N + + P N +R+ F +L+ L LI Sbjct: 237 TPEQIRDSFGNPETVPIFELPGFIRQLNDAGFAALQHRTWFQMQLSSPLLLAAMVLIG-- 294 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-PYYIPILYLFLFCISSIF 350 A R K + ++ + FGV + + E + + + Sbjct: 295 AGFTMRHTRFGKTGVMVLGAILLGFGVVFLRRFAEVLGETGQLAASLVAWTPPIAAILLA 354 Query: 351 LLMI 354 + + Sbjct: 355 IGFL 358 >gi|332088227|gb|EGI93348.1| hypothetical protein SD15574_3353 [Shigella dysenteriae 155-74] Length = 109 Score = 73.1 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 27/105 (25%), Positives = 45/105 (42%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLF 105 L M+ P + L M ++E+ I G R KP Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGAVRDACTKPFFI 105 >gi|288817926|ref|YP_003432273.1| hypothetical protein HTH_0610 [Hydrogenobacter thermophilus TK-6] gi|288787325|dbj|BAI69072.1| hypothetical protein HTH_0610 [Hydrogenobacter thermophilus TK-6] gi|308751524|gb|ADO45007.1| permease YjgP/YjgQ family protein [Hydrogenobacter thermophilus TK-6] Length = 352 Score = 73.1 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 64/364 (17%), Positives = 128/364 (35%), Gaps = 24/364 (6%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 Y+L + F++ ++ I + + + L S NI + L+P Sbjct: 2 LGKYVLFFYIKLFIVVNAILLGIVSSYALAELLFLFKEK--SANIAISYLLNLLPISFFY 59 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 + PF + +L + LI+ + G S + + ++ + +S F I + P Sbjct: 60 LLPFSAVITMMILLKHIFSKKLDLIVQSFGVSPLKFLLNIILFLVFVSFFNLIMSFDVYP 119 Query: 124 KCRSTIKQL--SAKAQLALTFSYLEENLFFRLDDDLYIKISK---YNPNNTLQGIFIVDS 178 + + + K + + + FF+ + I I+ + + G+F+V S Sbjct: 120 ESNKNLYSIEKEFKKRQEVEDLIVRNAWFFKEESGERIYINFQFVDIKDGNIAGVFLVKS 179 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + ++ + GS D I+L +V + + K + ++ + Sbjct: 180 SKSNILEVIQSDRGSWKGD--IILLPIAKVWNIKEGNFVAKGISIKLFEIKNAQPIGEKV 237 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + Q L NY Y SE +R L P+ G+ + A KR Sbjct: 238 EHISLHQLLLLYSLGKRVGLNY-----HLYLSEIIRRFLSSLSPIAIGITVMSYAIKR-- 290 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ----NPYYIPILYLFLFCISSIFLLMI 354 + I F+S +F +W + + NP Y Y+ L +S L + Sbjct: 291 ----RSILAGFLSFVPAFFFYWFSFVLTRFFSESVSFNPLYGLFAYIPLVILSLKGLYYL 346 Query: 355 KKKY 358 K + Sbjct: 347 GKGF 350 >gi|99080789|ref|YP_612943.1| permease YjgP/YjgQ [Ruegeria sp. TM1040] gi|99037069|gb|ABF63681.1| permease YjgP/YjgQ [Ruegeria sp. TM1040] Length = 368 Score = 73.1 bits (178), Expect = 7e-11, Method: Composition-based stats. Identities = 59/364 (16%), Positives = 130/364 (35%), Gaps = 19/364 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 +LY R + F++ ++ + +I + ++ + LL+++ P Sbjct: 2 ILDLYYARRFLQWFMVIAAVLMSLVMLIDLSEQFRRFDAQDLRFGQLLELTLLNAPAAFS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + T + M R++EL++ G S I + P + +A++L + N I Sbjct: 62 EFLPLIMILTTIVLFVGMARSSELVVTRAIGRSGIRALVPPVVVALVLGGLAVSTLNPIV 121 Query: 123 PKCRSTIKQLSAKAQLA---LTFSYLEENLFFRLD--DDLYIKISKYNPNNTLQGIFIVD 177 + + LS + S E L+ R + + I N + +++ D Sbjct: 122 AATTNRFETLSESYRQTGGPAAVSLSGEGLWLRQGGQNGQSV-IHAANYRGDAENLYLYD 180 Query: 178 ------SRDTQTHKIYYAQSGSIDLDRQAIILNDGEV-HRKSPISKDISIMKFKSYTLQT 230 + D + A ++ D +L D +V ++ + S ++ L T Sbjct: 181 VSILTYAPDGGPTRRTVAAEARLEGDD--WVLRDAKVWQLILGVNPERSAKRYDELRLPT 238 Query: 231 ESANSSTIVLKANDQNLS-FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 N + +S + L + + ++ L + LF V L+ Sbjct: 239 TLTNERIRDTLGYAEGISIYDLPQTIQSLSEAGFSTTRFQVWLQVELARPLFLVAMVLVG 298 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 AA R + S+ + F +++ ++ + +N +L + ++SI Sbjct: 299 --AAFTMRHTRLGGTGVAVLTSVLLGFALYFVHNF-ARILGENGQIPILLAAWAPPVASI 355 Query: 350 FLLM 353 L M Sbjct: 356 LLTM 359 >gi|154174950|ref|YP_001408879.1| methionyl-tRNA formyltransferase [Campylobacter curvus 525.92] gi|112803667|gb|EAU01011.1| methionyl-tRNA formyltransferase [Campylobacter curvus 525.92] Length = 356 Score = 73.1 bits (178), Expect = 7e-11, Method: Composition-based stats. Identities = 55/370 (14%), Positives = 116/370 (31%), Gaps = 30/370 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + Y+ +SFL+ + I +L + + + S N+ L G + + Sbjct: 3 LNLYARYVGWVYLKSFLIVFFALELFYVGIDLLTNLKDLPN---SANLQLLYVGLTLLSA 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P +M R+ EL+ G S+ LI P F+A+ ++ Sbjct: 60 VSYVMPISLVFALIISHINMVRSNELVSFYALGVSKNGLILPPFFIALAVTFL--YVGLN 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSR 179 P +FS + F + + +I I + + + + + I D Sbjct: 118 CTPFAY--AYDYQKSIAKNTSFSKSTTDSFLK-FEGKFIYIKELSASQKNAKDVRIFDIN 174 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEV--HRKSPISKDISIMKFKSYTL-------QT 230 T +A + + + + K +S+ F Sbjct: 175 GTDLLSTTFADGAKFKNNHWQLQDVNQTLLPKDLRLGQKGLSVQNFDELDALSGFKPKSI 234 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 ESAN++ + L F+ Y + + P + + Sbjct: 235 ESANAADGARFSIPDTLDFIFTFKNEGVELDSVKSAFY--------SLAIAPFFAPFLIL 286 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN----PYYIPILYLFLFCI 346 V + + + + V WG +++ + Q+ P + +L + L Sbjct: 287 VLYYHLPMTGRFFNLAFASFIFVVITLVIWGVLFVLTRFAQSSVILPEFGIVLPVILLFA 346 Query: 347 SSIFLLMIKK 356 I+LL + Sbjct: 347 YGIYLLKTHR 356 >gi|291287414|ref|YP_003504230.1| permease YjgP/YjgQ family protein [Denitrovibrio acetiphilus DSM 12809] gi|290884574|gb|ADD68274.1| permease YjgP/YjgQ family protein [Denitrovibrio acetiphilus DSM 12809] Length = 361 Score = 72.7 bits (177), Expect = 8e-11, Method: Composition-based stats. Identities = 66/377 (17%), Positives = 131/377 (34%), Gaps = 38/377 (10%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F YI++ + ++ +F+ I + Q ++S S L+ P + Sbjct: 1 MTKFNKYIIKLFVQYTVIVQVFVAIITLIANTFQHTKMLSEYNISFMTLIVYDLMKTPYL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + T V+ ++ +N EL+ + G L P + I LS+ L+ S ++ Sbjct: 61 LYTTMPMTIVISTMLVMVTLLKNNELIAYVSLGGKIRNLAYPFIVSGIFLSVLLYFSADV 120 Query: 121 IEPK--------CRSTIKQLSAKAQLALTFSYLEEN-------LFFRLDDDLYIKISKYN 165 I PK IK + LT +L+E+ + I I++Y+ Sbjct: 121 INPKIMLERERFAYENIKNRTFNVSGKLTDMWLKESDSSFININLMDPTEKKIIGITEYH 180 Query: 166 PNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK-FK 224 NN Q +IV + + G + + D + I + F Sbjct: 181 LNNNFQVDYIVTYDSAEYY------EGKWIEKNKKVFAMDPVPVMTDSAEEVIQERELFD 234 Query: 225 SYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVI 284 T + + LK + + + N Y +L ++Y L ++ Sbjct: 235 ELT-SLPVLSPKFLSLKEVRRTAEIMKKQDINTAKYYLQLYKSY--------AHALSVIV 285 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI----LY 340 +I ++ R I SL F +W + + + P+ + Sbjct: 286 --IILVIFPLCIGFNRNHSYIAVASKSLFTGFA-YWMLMASFQSLGKTGLFSPLAANFIP 342 Query: 341 LFLFCISSIFLLMIKKK 357 + F I ++ L+ +++ Sbjct: 343 IGAFFILALALIYRRER 359 >gi|15605574|ref|NP_220360.1| hypothetical protein CT839 [Chlamydia trachomatis D/UW-3/CX] gi|76789584|ref|YP_328670.1| permease [Chlamydia trachomatis A/HAR-13] gi|237803271|ref|YP_002888465.1| putative membrane transport protein [Chlamydia trachomatis B/Jali20/OT] gi|237805192|ref|YP_002889346.1| putative membrane transport protein [Chlamydia trachomatis B/TZ1A828/OT] gi|255311680|ref|ZP_05354250.1| putative membrane transport protein [Chlamydia trachomatis 6276] gi|255317981|ref|ZP_05359227.1| putative membrane transport protein [Chlamydia trachomatis 6276s] gi|3329310|gb|AAC68436.1| hypothetical protein CT_839 [Chlamydia trachomatis D/UW-3/CX] gi|76168114|gb|AAX51122.1| predicted permease [Chlamydia trachomatis A/HAR-13] gi|231273492|emb|CAX10408.1| putative membrane transport protein [Chlamydia trachomatis B/TZ1A828/OT] gi|231274505|emb|CAX11301.1| putative membrane transport protein [Chlamydia trachomatis B/Jali20/OT] gi|296436395|gb|ADH18569.1| putative membrane transport protein [Chlamydia trachomatis G/9768] gi|296437326|gb|ADH19496.1| putative membrane transport protein [Chlamydia trachomatis G/11222] gi|296438254|gb|ADH20415.1| putative membrane transport protein [Chlamydia trachomatis G/11074] gi|297140755|gb|ADH97513.1| putative membrane transport protein [Chlamydia trachomatis G/9301] gi|297748967|gb|ADI51513.1| Predicted permease [Chlamydia trachomatis D-EC] gi|297749847|gb|ADI52525.1| Predicted permease [Chlamydia trachomatis D-LC] Length = 354 Score = 72.7 bits (177), Expect = 8e-11, Method: Composition-based stats. Identities = 50/321 (15%), Positives = 117/321 (36%), Gaps = 20/321 (6%) Query: 40 SSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITL 99 + + K++ Y IP +LP + P + + ++ N ++ + +G S+ + Sbjct: 39 IAKDVPYATVFKVTAYQIPYLLPFILPASCFISAFTLFRKLSDNNQITFLKASGASQGMI 98 Query: 100 IKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI 159 I PVL + +L F F + + + CR + A + L+ + ++D Sbjct: 99 IFPVLIASGVLCCFNFYTCSELASICRFQTGKEIANIAMTSPALLLQ--TLQKKENDRIF 156 Query: 160 KISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSP---ISK 216 + + + I + + I + ++ D+++ ++ + V K P ++ Sbjct: 157 IAIDHCGKSKFDNVVIALKHNQEISNIGFIETIIPDVNKDSVQAKNVLVISKIPLFSEAR 216 Query: 217 DISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYR---SEFH 273 + +F TL T L A + + +L++ R +E Sbjct: 217 TSNPNEFYLETLDEFLIPKITATLFAGKSYM-----KTRTDYLPWKQLIQDARLHLAEIL 271 Query: 274 KRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP 333 +R+ L + + R+ I+ +F L++ F + + K +P Sbjct: 272 RRIAIGLLCSTMTFSGLALGTYKPRFRKPVLIYALFPILNLIFLI-------VGKNTIHP 324 Query: 334 YYIPILYLFLFCISSIFLLMI 354 +L+LF +S + Sbjct: 325 ISAVMLFLFPQLLSWLIFSWR 345 >gi|332976301|gb|EGK13158.1| permease YjgP/YjgQ [Psychrobacter sp. 1501(2011)] Length = 455 Score = 72.7 bits (177), Expect = 8e-11, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 46/132 (34%), Gaps = 1/132 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K Y+ + L + L + + V L + + S + + L Y P L Sbjct: 19 KIISRYVKTNALFAMLFAVLGLWALQIVFAYLAELEDI-SDSYTYFDALTYILYKSPYFL 77 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 TP + L + N+EL+++ G S ++ VL A + I + Sbjct: 78 EQFTPTGALLGAVIGLGLLANNSELIVMRAAGLSIYRIVSWVLQPAFIFVILALGINQYV 137 Query: 122 EPKCRSTIKQLS 133 P+ Q+ Sbjct: 138 LPETNLMANQIR 149 >gi|319784424|ref|YP_004143900.1| permease YjgP/YjgQ family protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170312|gb|ADV13850.1| permease YjgP/YjgQ family protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 360 Score = 72.7 bits (177), Expect = 9e-11, Method: Composition-based stats. Identities = 51/377 (13%), Positives = 109/377 (28%), Gaps = 52/377 (13%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + Y + + ++ + ++I + + + + ISG +P ++ Sbjct: 4 TLGRYFFFRYVTITIWFFIGLLALVFLIDFTELSGRTTGLPGFTYGTAVAISGLRMPMIM 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PF L S+NR EL+I + G S + P A+L + N + Sbjct: 64 LQTVPFVGLFSAMATLVSLNRRYELVIARSAGVSAWQFLLPCCIGALLFGVLSVGVINPL 123 Query: 122 EPKCRSTIKQLSAKAQLAL-------TFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGI 173 S +Q+ + + ++ + D I + + Sbjct: 124 AAHAFSWSEQIETQLRSGKSNTVSADAAPWIRQKT---SSGDTIIGARAILNQGLEMADV 180 Query: 174 --FIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 FI+D + + D L DG + + F++ T+Q Sbjct: 181 VFFILDPQGNIVER----------KDAARAFLRDGYWELQDVKT-------FQNGTIQAS 223 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYR-----------PELLETYRSEFHKRLTQWL 280 + + LK + + L P Y + +F + Sbjct: 224 ATDRVPTNLKP--EFVQERLARPETIPFYDLPGKIEVARSFGLKANAFAMQFDSLVALPF 281 Query: 281 FPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFW------GFSYIIHKIEQNPY 334 V LI+ A R + I + F ++ F Sbjct: 282 LLVAMTLIA--ATVSMRFARMGQSATMILGGIIAGFLLYVVSVLVKAFGVAGFVPTVVAA 339 Query: 335 YIPILYLFLFCISSIFL 351 ++P++ F ++ + Sbjct: 340 WVPVMVAMFFGVTFLLY 356 >gi|190891135|ref|YP_001977677.1| permease [Rhizobium etli CIAT 652] gi|190696414|gb|ACE90499.1| putative permease protein [Rhizobium etli CIAT 652] Length = 362 Score = 72.7 bits (177), Expect = 9e-11, Method: Composition-based stats. Identities = 46/361 (12%), Positives = 113/361 (31%), Gaps = 24/361 (6%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTV 60 + Y R + + IA+++ + +S ++ + ++ +P + Sbjct: 4 GTLSRYFFRRYVATTGWFLIGASAIAFLLDFSETAGRMSGLPGYTIGGGIVMTAVRLPLI 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L PF VL +NR EL++ G S + P + ++ L + + N Sbjct: 64 LQQTIPFVALFVGMTVLIGLNRKYELVVTRAAGISVWQFMFPFIAGSLALGVLTTTALNP 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEEN----LFFRLDDDLYIKISKYNPNNT--LQGIF 174 + + + + + DD+ I N T + + Sbjct: 124 LAAWGQRQALLVESDWRGENAVLRKAPQIPWLRQISGRDDVIIGAQTVQENGTKLIDAVL 183 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI----SKDISIMKFKSYTLQT 230 I + A + ++ + +G V RK + + Sbjct: 184 IHFDSSGRVILRQDAATAKLEDGYWQL---NGVVERKPGEIPLRKASVQLRT------NL 234 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 + + L N ++ + ++F+ L+Q L V LI+ Sbjct: 235 KQDFVQERLTAPETIGFFDLSNRIAAAKSF-GISTKALETQFNSLLSQPLLLVAMTLIAA 293 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 + K + Q + + I + F ++ + ++ + P + ++ + ++ Sbjct: 294 TVSLKFSRFNQSRSV--ILGGILSGFMLYVI-TVLVKAFGSSGVVPPFVATWIPVVVALA 350 Query: 351 L 351 L Sbjct: 351 L 351 >gi|89898056|ref|YP_515166.1| hypothetical protein CF0249 [Chlamydophila felis Fe/C-56] gi|89331428|dbj|BAE81021.1| conserved hypothetical protein [Chlamydophila felis Fe/C-56] Length = 357 Score = 72.7 bits (177), Expect = 9e-11, Method: Composition-based stats. Identities = 42/326 (12%), Positives = 103/326 (31%), Gaps = 15/326 (4%) Query: 40 SSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITL 99 + +L+++ Y IP +LP + P + + ++ N ++ + +G S + Sbjct: 39 IAKDVPYPTVLRLTAYQIPYLLPFILPISCFISAFTLFRGLSDNNQITFLKASGASHGII 98 Query: 100 IKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI 159 I P L ++ + F + + + CR + A + L+ + +++ Sbjct: 99 IFPALMVSCAICCINFYTCSELASICRFQTCKEIANMAMTSPTLLLQ--TLQKKENNRIF 156 Query: 160 KISKYNPNNTLQGIFIVDSRDTQTHK-----IYYAQSGSIDLDRQAIILNDGEVHRKSPI 214 + + + I RD + + + + +++ + Sbjct: 157 ITVDHCAKSKFDNVIIALKRDQEIANVGIIKTIIPDVANDTVQAKNVVMISKLPSTLTDQ 216 Query: 215 SKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHK 274 S + +L T L A + + P + + E + Sbjct: 217 HSSNSQEYYIE-SLNEMLIPKITSTLFAGKSYMKTRTDYLPWKQLVKQSFSHAHLPETLR 275 Query: 275 RLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY 334 R+ L + +V + R+ I L F V I+ K + + Sbjct: 276 RIGIGLLCITLTYSGMVLGTYKPRFRK-------PIILYCVFPVMDLILLIVGKNTNSLF 328 Query: 335 YIPILYLFLFCISSIFLLMIKKKYTK 360 +L++ IS I + + + Sbjct: 329 PALMLFIVPQVISWIVFAIRAYRENR 354 >gi|254477617|ref|ZP_05091003.1| permease YjgP/YjgQ [Ruegeria sp. R11] gi|214031860|gb|EEB72695.1| permease YjgP/YjgQ [Ruegeria sp. R11] Length = 367 Score = 72.3 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 54/364 (14%), Positives = 125/364 (34%), Gaps = 16/364 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + + Y R + F + C ++ + +I + ++I + S L ++ P L Sbjct: 2 TLDFYYARRFLQWFAVICAVLLTLVMLIDLNEQIRRFDAQDLSFGQLFGLTLLNAPAALS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + T + + R++EL++ G S I + + LA + + + N I Sbjct: 62 EFLPLIMILTTIVLFVGLARSSELVVTRAIGRSGIRALAAPVVLAAFIGLLAVSTLNPIV 121 Query: 123 PKCRSTIKQLSAKAQLALTF--SYLEENLFFRLD---DDLYIKISKYN---PNNTLQGIF 174 + + L+ + S E L+ R I Y+ + TL G+ Sbjct: 122 AATSNHYRDLAETYRNGGPAALSLTGEGLWLRQGGAQGQSVIHAKGYSGDVEDVTLLGVT 181 Query: 175 IVDSRDTQTHKIYY-AQSGSIDLDRQAIILNDGEVH-RKSPISKDISIMKFKSYTLQTES 232 I+ A+S ++ D +L + +V + ++ + + + S L T Sbjct: 182 ILSYGPEGRPIRQTVARSATL--DGSDWVLTNAKVWPLVTGVNPETNATEHASLRLSTTL 239 Query: 233 ANSSTIVLKANDQNLS-FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 + +S + L + Y L + LF + L+ Sbjct: 240 TSERIRDTLGTATGISVYDLPATIRELAEAGFSTKRYEVWLQVELARPLFLIAMVLVG-- 297 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL-YLFLFCISSIF 350 AA R + +++ + FG+++ ++ E + + + + Sbjct: 298 AAFTMRHARFGGTGLAVLMAVLLGFGLYFLRNFAQILGENGQIPVALAGWAPPVAAILLT 357 Query: 351 LLMI 354 + ++ Sbjct: 358 MGLL 361 >gi|209548670|ref|YP_002280587.1| permease YjgP/YjgQ family protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534426|gb|ACI54361.1| permease YjgP/YjgQ family protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 362 Score = 72.3 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 49/360 (13%), Positives = 117/360 (32%), Gaps = 22/360 (6%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTV 60 + Y R + + + I++++ + +S ++ + ++ +P + Sbjct: 4 GTLSRYFFRRYMVTMGWFLIGVSAISFLLDFSETAGRMSGLPGYTIGGGILMTAVRLPLI 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L PF VL +NR EL++ G S + P + +++L + + N Sbjct: 64 LQQTVPFIALFVGMTVLIGLNRKYELVVTRAAGISVWQFMFPFIAGSLILGLLTMTALNP 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEEN----LFFRLDDDLYIKISKYNPNNT--LQGIF 174 + + + + + DD+ I N T + + Sbjct: 124 LAAWGQRQALLVESDWRGENAVLRKAPQIPWLRQISGRDDVIIGAHTVQENGTKLIDAVL 183 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 I Q A + L DG + + + + + ++Q + Sbjct: 184 IHFDSSGQVILRQDAATAK---------LEDGYWQLNNVVERKPGEIPMRKASVQLRTNL 234 Query: 235 SSTIV---LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 V L A + F L+ + ++F+ L+Q L V I+ Sbjct: 235 KQDFVQERLTAPETIGFFDLSNRIAAAKSFGISTKALETQFNSLLSQPLLLVAMTFIAAT 294 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + K + Q + + I + F ++ + ++ + P + ++ I ++ L Sbjct: 295 VSLKFSRFNQSRSV--ILGGILSGFMLYVI-TVLVKAFGSSGVVPPFVATWIPMIVALAL 351 >gi|94987323|ref|YP_595256.1| permease [Lawsonia intracellularis PHE/MN1-00] gi|94731572|emb|CAJ54935.1| predicted permeases [Lawsonia intracellularis PHE/MN1-00] Length = 366 Score = 72.3 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 60/359 (16%), Positives = 133/359 (37%), Gaps = 19/359 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+++ + L++ + + + + +R++ + S I+L Y P Sbjct: 1 MSLLFRYLIKNNTKILLLTLTIGIGVYILTDLFERLDNFIEAHTSTKIILTYFIYKTPFA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + PF F + T L M + EL+ + G S + ++ ++ FI Sbjct: 61 IAQILPFIFLISTVIQLCIMAKKKELIALQAGGISFTRIASIIIIASLFWGTIQFIFSEY 120 Query: 121 IEPK-CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI--FIVD 177 I R +++ + ++++F D + + I+ P++T G +++D Sbjct: 121 IGTACGRKSLQIWQEYVHNQHKSKTILKDIWFT-DKNWIVSINTLKPDDTGSGFSAYLLD 179 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 KI +A S SI + + +V P +++ + T S Sbjct: 180 KNGLTIEKIIWALSFSIHNNEWILK----KVAVSEPALYSQEMLQELTLTFNQSSETLKF 235 Query: 238 IVLKANDQNLSF-LLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 I Q LSF L + +E ++ +H +L+ V+ L++ Sbjct: 236 IQNNNAPQQLSFWELRETIHKLERSGSNVELLKTSWHTKLSYSFSLVVMALLA------- 288 Query: 297 ALVRQRKKIHPIFISLSISF-GVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLL 352 + K I I+ S+ + ++ + I + PI+ ++ I S+ + Sbjct: 289 TTIVAWKNNIYIAIAFSLLYTFIYNALNTIGISLGNKGIISPIIGAWIANLVIMSVTIW 347 >gi|166154183|ref|YP_001654301.1| putative membrane transport protein [Chlamydia trachomatis 434/Bu] gi|166155058|ref|YP_001653313.1| putative membrane transport protein [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335428|ref|ZP_07223672.1| putative membrane transport protein [Chlamydia trachomatis L2tet1] gi|165930171|emb|CAP03655.1| putative membrane transport protein [Chlamydia trachomatis 434/Bu] gi|165931046|emb|CAP06609.1| putative membrane transport protein [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 354 Score = 72.3 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 50/321 (15%), Positives = 117/321 (36%), Gaps = 20/321 (6%) Query: 40 SSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITL 99 + + K++ Y IP +LP + P + + ++ N ++ + +G S+ + Sbjct: 39 IAKDVPYATVFKVTAYQIPYLLPFILPASCFISAFTLFRKLSDNNQITFLKASGASQGMI 98 Query: 100 IKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI 159 I PVL + +L F F + + + CR + A + L+ + ++D Sbjct: 99 IFPVLIASGVLCCFNFYTCSELASICRFQTGKAIANIAMTSPALLLQ--TLQKKENDRIF 156 Query: 160 KISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSP---ISK 216 + + + I + + I + ++ D+++ ++ + V K P ++ Sbjct: 157 IAIDHCGKSKFDNVIIALKHNQEISNIGFIETIIPDVNKDSVQAKNVLVISKIPLFSEAR 216 Query: 217 DISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYR---SEFH 273 + +F TL T L A + + +L++ R +E Sbjct: 217 TSNPNEFYLETLDEFLIPKITATLFAGKSYM-----KTRTDYLPWKQLIQDARLHLAEIL 271 Query: 274 KRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP 333 +R+ L + + R+ I+ +F L++ F + + K +P Sbjct: 272 RRIAIGLLCSTMTFSGLALGTYKPRFRKPVLIYALFPILNLIFLI-------VGKNTIHP 324 Query: 334 YYIPILYLFLFCISSIFLLMI 354 +L+LF +S + Sbjct: 325 ISAVMLFLFPQLLSWLIFSWR 345 >gi|157165310|ref|YP_001466458.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Campylobacter concisus 13826] gi|112801662|gb|EAT99006.1| permease YjgP/YjgQ [Campylobacter concisus 13826] Length = 354 Score = 72.3 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 58/368 (15%), Positives = 117/368 (31%), Gaps = 26/368 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y+ +SFL+ L + I +L + + S N+ L G + Sbjct: 1 MKLYARYVGWVYIKSFLIVFLALELFYVGIDLLTNLKDLP---PSANLQLLYVGLTALSA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + +M R+ EL+ G S+ LI P +A ++I F Sbjct: 58 ISYVLPLSLIFALIILHVNMVRSNELISFYALGISKNKLILPPFLIAFFVTI--FYVGLN 115 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 P + FS + F + + +I I + N + I D Sbjct: 116 FTPFAYAH--DYQKSIAKNTAFSKSTNDSFLK-FEGKFIYIKELNSAKQRANDVRIFDIN 172 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 T +A + +L D P + ++ F + Sbjct: 173 GTDLLSTTFADHAKFKDNE--WVLED-VNQTFLPQNLELGENGFSK---VKSENLDALRG 226 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEF----HKRLT---QWLFPVIFGLISIVA 292 K + + + N ++T+++E R + P + ++ Sbjct: 227 FKPKSIESAASVENSKFNIPDAINFIKTFKNEGIGLDSARTAFYNLAITPFFAPFLLLIF 286 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP----ILYLFLFCISS 348 + + + + V WG +I+ K Q +P ++ + L + Sbjct: 287 YYHLPVTGRFFNLALSTFIFVVITLVVWGLLFILTKFAQTSVILPEIGMVVPVILLFAYA 346 Query: 349 IFLLMIKK 356 I+L+ + Sbjct: 347 IYLIKSHR 354 >gi|254503227|ref|ZP_05115378.1| putative permease, YjgP/YjgQ family [Labrenzia alexandrii DFL-11] gi|222439298|gb|EEE45977.1| putative permease, YjgP/YjgQ family [Labrenzia alexandrii DFL-11] Length = 364 Score = 72.3 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 55/359 (15%), Positives = 122/359 (33%), Gaps = 19/359 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTV 60 ++ +Y ++ L LF + ++ +L+ + S ++ + IS +P + Sbjct: 5 RTLSVYFSGRFIKAILGLFLFAAVLLFLFDVLELVRRGSDREGFTVMRVAYISLLRVPLL 64 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V PF +++R EL++ G S P + + + L IF N Sbjct: 65 LEQVIPFTVLFGAIAAFVTLSRALELVVTRAAGISVWQFSTPAVLVGLFLGIFSITVYNP 124 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLE-ENLFFRLDDDL----YIKISKYNPNNT-LQGIF 174 + ++ +A A L+ + D L ++ S+ N T L + Sbjct: 125 AAVYLQQKSEEAAAGLFGADQTFLLQSSGEVWVRQDGLDGESVLRASQLLDNGTRLLRVT 184 Query: 175 IVD-SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 + D + A+ + + L++ V+ + S+ Y + T Sbjct: 185 VFTFDEDGTFRERIEAEQARL--GNETWYLDNAIVYTTENDPQSYSV-----YQISTFLT 237 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLE-TYRSEFHKRLTQWLFPVIFGLISIVA 292 + + +++SF P + L Y ++ L + L ++ +I I A Sbjct: 238 ATEVRESIGSPESISFWNLPRFIDLARNAGLPAYRYNLQYQSLLARPL--LLIAMILIAA 295 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 A + R I + F ++ + P++ + I + + Sbjct: 296 AVSLKVSRFGGLGRMILGGILSGFVLYVLTE-LAKDFGGAGIVPPLVAAWAPGIFGVLM 353 >gi|153007032|ref|YP_001381357.1| permease YjgP/YjgQ family protein [Anaeromyxobacter sp. Fw109-5] gi|152030605|gb|ABS28373.1| permease YjgP/YjgQ family protein [Anaeromyxobacter sp. Fw109-5] Length = 358 Score = 72.3 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 44/363 (12%), Positives = 108/363 (29%), Gaps = 15/363 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y R +F+ S +V I + + + + +L++ V+ Sbjct: 2 ILFRYAARRTFAAFVGSLAGVVAIFLAVDFVDNSASFTGPGW-IPAVLELYANKTAVVVR 60 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 V P + +++ R E + G L PV + +L L + ++ Sbjct: 61 QVAPAAMVLGAAIAVSTFRRTREYTAMRALGLGPWRLAGPVAAVTLLAGAALVVVHDVWG 120 Query: 123 PKCRSTIKQLSAKAQLALTFSYLE---ENLFFRLDDDLYIK-ISKYNPNNTLQGIFIVDS 178 + + +++ A + + +FR D I + P + ++ + Sbjct: 121 VEATARAEEIRATRFSRGVRQFQQAREPKRWFRSRDGRRIYHLGASLPGGGFARVTVL-A 179 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-DISIMKFKSYTLQTESANSST 237 + + D A +L + + P + + Y + Sbjct: 180 VTPDFRLAGRIDAARMRPDGDAWMLEEVQDRTFLPDGSVRLERADSRRYEFPEPPEAFAV 239 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + + L+ + E ++ E + R+ + A Sbjct: 240 VPGRPSQLRWRTLVAQ-IAVRRHLGLATEEFQLERYDRVAYPFA--GVPGALLAVALALR 296 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF----LFCISSIFLLM 353 R+ + S+ +S +FWG + + + P + + LF I + Sbjct: 297 RNRKGHVSAALVESVGVSL-LFWGVQGVSFALGLSGRVAPWVAAWAPNALFLALGIAAVR 355 Query: 354 IKK 356 + Sbjct: 356 RAR 358 >gi|162149096|ref|YP_001603557.1| hypothetical protein GDI_3326 [Gluconacetobacter diazotrophicus PAl 5] gi|209545161|ref|YP_002277390.1| permease YjgP/YjgQ family protein [Gluconacetobacter diazotrophicus PAl 5] gi|161787673|emb|CAP57269.1| putative membrane protein [Gluconacetobacter diazotrophicus PAl 5] gi|209532838|gb|ACI52775.1| permease YjgP/YjgQ family protein [Gluconacetobacter diazotrophicus PAl 5] Length = 369 Score = 71.9 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 55/366 (15%), Positives = 117/366 (31%), Gaps = 30/366 (8%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTVL 61 + YI R + + L + + + + + V++ ++ +I+ +P + Sbjct: 6 TLSFYIARQFTLAVMAMILSLTGLVSLFDFIDLLRRVATRPDVPTSLASEIALLHVPYFM 65 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF + + R++EL++ G S + L A+L+ I + + + Sbjct: 66 IEILPFGVLLGGIVCFWRLTRSSELIVARAAGISAWQFLTGPLSCALLIGILATGALSPL 125 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENL--FFRLDDDLY------IKISKY-NPNNTLQ- 171 + L + L + + D L + L+ Sbjct: 126 SSIMYRQAETLDHVYLRSGGPLNLSDGALWLRQADSGLVPHGVAILHARSVHLQGGVLRI 185 Query: 172 -GIFIVDSRDTQTHKI-YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ 229 GI + DT + A G + R+ I D R P + +F T Sbjct: 186 GGISLFRLDDTDHLIVRIEAPEGYL--GRKVWIFQDARTIR--PDRLPVPAGRFVMPT-D 240 Query: 230 TESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRL---TQWLFPVIFG 286 + ++ L P + L + S RL T P++ G Sbjct: 241 LTVPRVQESFASPDTLSVWAL-------PGFIALLERSGFSSIRHRLHFQTLLTLPILAG 293 Query: 287 LISIVAAD-KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC 345 +++VAA R+ I ++ F +F + ++ P+L + Sbjct: 294 TMALVAAGFSMRPTRRGGVARMIGSGVAAGFALFTISKVAA-QFGESGAMPPLLAAWAPT 352 Query: 346 ISSIFL 351 + + L Sbjct: 353 GAGLCL 358 >gi|188583149|ref|YP_001926594.1| permease YjgP/YjgQ family protein [Methylobacterium populi BJ001] gi|179346647|gb|ACB82059.1| permease YjgP/YjgQ family protein [Methylobacterium populi BJ001] Length = 362 Score = 71.9 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 52/335 (15%), Positives = 115/335 (34%), Gaps = 34/335 (10%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTVL 61 + Y R+ L L + + + + ++ + S S ++ +++ Y P V Sbjct: 6 TLGRYFAWRFVRTILGVFLTVFALVYTLDFVELLRRAGDSEGASTGLMAQLALYRTPAVA 65 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 V PF + L ++R EL++ G S ++P F+A+ + + N + Sbjct: 66 ESVLPFAVLFGSMAALLQLSRKLELVVARAAGISAWQFLQPGAFVALAIGALAIGAYNPL 125 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN------------NT 169 + +KQ S++ + + + DL+++ + T Sbjct: 126 S----AALKQRSSEIEAKIFAKSTKAGT----GKDLWLRQRSVDGQAIIRAETAVEGTTT 177 Query: 170 LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI--SKDISIMKFKSYT 227 L G+ + D ++ AQ ++ L+DG + ++D + Y Sbjct: 178 LAGVTVFQFDDAG---VFTAQ-----IEAARATLHDGWWELRDVRVLTRDEPPESHEVYL 229 Query: 228 LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPEL-LETYRSEFHKRLTQWLFPVIFG 286 + + S +++ F P + R L YR ++ L L + Sbjct: 230 VASTLDPSQIRQRFTPPESVPFWQLPETIARHERAGLDATRYRLQYDVLLATPLLYLAMV 289 Query: 287 LISIVAADKRALVRQRKKIHPIFISLSISFGVFWG 321 L++ A R + +S F ++ Sbjct: 290 LVA--ATVSLRFFRFGGVGKLVLGGVSAGFVLYVA 322 >gi|58038774|ref|YP_190738.1| hypothetical protein GOX0299 [Gluconobacter oxydans 621H] gi|58001188|gb|AAW60082.1| Hypothetical transmembrane protein [Gluconobacter oxydans 621H] Length = 396 Score = 71.9 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 52/365 (14%), Positives = 114/365 (31%), Gaps = 25/365 (6%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTV 60 + +YI R S L L + + + + + ++ ++++KI+ +P Sbjct: 31 TTLAIYIARQFMLSTLSMVLALTGLVSLFDFIDLLRRAATRPNVPASLIVKIAALHVPYY 90 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V PF + + + R++EL++ G S + L A+L + + Sbjct: 91 IIYVLPFGILLGGIVCFSRLTRSSELIVARAAGISAWQFLASPLACALLTGLLTTTGISA 150 Query: 121 IEPKCRSTIKQLSAK-AQLALTFSYLEENL--FFRLDDDLYIK---------ISKYNPNN 168 + + + L + L + DD L + + Sbjct: 151 LSSTMFRSAEMLDQTYLRTGGGPLTLNGGALWLRQSDDGLVPHGVAILHAQDVHLIDGAL 210 Query: 169 TLQGIFIVDSRDTQTHKIYY-AQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 + G+ I D + A G++ IL+ V + + I M S Sbjct: 211 KVSGVSIFRLDDRDRLIVRVEAPQGAL--GDHQWILHGTSVLHPDHLPQQIGDMTLPS-- 266 Query: 228 LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLE-TYRSEFHKRLTQWLFPVIFG 286 + ++ L P + R +R F L + Sbjct: 267 -DLTVGRVQESFASPDTLSVFAL--PGFISLLERSGFPSIRHRLHFQSLLALPILAGTMA 323 Query: 287 LISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCI 346 L+S A R+ + ++ F +F S + + ++ P+L + Sbjct: 324 LVS--AGFSMRPTRRGGVARMLGSGIAAGFALFTI-SKVAEQFGESGALPPVLAAWAPTG 380 Query: 347 SSIFL 351 + + L Sbjct: 381 AGLCL 385 >gi|296445732|ref|ZP_06887685.1| permease YjgP/YjgQ family protein [Methylosinus trichosporium OB3b] gi|296256712|gb|EFH03786.1| permease YjgP/YjgQ family protein [Methylosinus trichosporium OB3b] Length = 361 Score = 71.9 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 40/330 (12%), Positives = 102/330 (30%), Gaps = 26/330 (7%) Query: 3 SFELYI---LRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPT 59 + Y+ + + ++F+ + +++L+R + + + + ++ +P Sbjct: 5 TLSRYLAARFAKTILAIFATMFCLMFVVYFVELLRRAGDIPQAG--ADTVALMTILRVPA 62 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + PF + R EL++ +G S + P F+A+++ + N Sbjct: 63 TAETILPFAVLFGAMTTFVDLTRKLELVVARASGVSVWQFLFPPAFVALVIGVVSVTLYN 122 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLD--DDLYI-KISKYNPNNTLQGIFIV 176 + + Q+ + ++ + + RL D I + Y Sbjct: 123 PVSAVMKQRSDQMELELFGVQGSVRVDHSKWLRLTGVDGTAILHATDYQAGG-------- 174 Query: 177 DSRDTQTHKIYYAQSG----SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL--QT 230 +R T+ Y++ G ++ R ++ + + SY L Sbjct: 175 -ARLTEVSVNVYSKEGLFLERVEAARARLLAGVFVLEEARVNAPGEESRTVGSYLLATDL 233 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 T LL + Y +F L + L ++ ++ + Sbjct: 234 TPEQLVTATTPPQGAPFWSLLELGEKTAD-AGLDPTGYILQFQTLLARPL--LLVAMVLV 290 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFW 320 A+ R + + F ++ Sbjct: 291 AASFSLRFFRMGGIARTVSGGVVAGFVLYI 320 >gi|168701113|ref|ZP_02733390.1| hypothetical protein GobsU_16419 [Gemmata obscuriglobus UQM 2246] Length = 410 Score = 71.9 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 26/186 (13%), Positives = 65/186 (34%), Gaps = 5/186 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + I + R FL+S + + V+ +Q+ + + SL L++ L+P++L Sbjct: 4 TTLNRMIFWELVRVFLLSLGSLTGLVLVVMSVQQASQL---GLSLAQLVRAVPLLVPSIL 60 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P+ P V + + E++ + G ++KP L L +L + + Sbjct: 61 PIAIPATTLFAACVVYGRLAHDNEVIALKAAGVHLFGIVKPTLLLGVLTTATTAALAHST 120 Query: 122 EPKCRSTI-KQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + ++ + + L + + + L + + Sbjct: 121 IPRTQQMFWDEILSDPEEVLYNMIRRDRCLRHPSLPNVLYVRDVE-GKRLIDVVVKRRIK 179 Query: 181 TQTHKI 186 + + Sbjct: 180 EKDPRT 185 >gi|167646491|ref|YP_001684154.1| permease YjgP/YjgQ family protein [Caulobacter sp. K31] gi|167348921|gb|ABZ71656.1| permease YjgP/YjgQ family protein [Caulobacter sp. K31] Length = 367 Score = 71.9 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 58/360 (16%), Positives = 119/360 (33%), Gaps = 26/360 (7%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSST-ESLNILLKISGYLIPTVLP 62 E Y+L+ S + + + +I + V + LL ++ P + Sbjct: 7 IERYVLKKTLGSLAAALAVVSVLVMLIAFVDISKSVGTRAEVGFGELLFLTVLQAPATIL 66 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++TPF F T +NR +EL+ + G S I P A ++ + N + Sbjct: 67 LLTPFIFLFGTLGAFVGLNRRSELIAMRAAGVSAWRFIMPAAVAAFVMGLLTLTLLNPLT 126 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD---LYIKISKYNPNN---TLQGI--F 174 S + S A + + L+ R DD + I+ + N L+G+ F Sbjct: 127 -AAMSAQFETSRNAMMENYLKSAPKGLWLRQGDDKTQVVIRARARDQINGAVRLRGVSLF 185 Query: 175 IVDSRDT---QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL--Q 229 + + Q + A ++ + V P + I ++YTL Sbjct: 186 VYAVQPNGALQFSQRIEADEARLEPGFWQLS----GVRVAMPGAGAIRS---ETYTLPSN 238 Query: 230 TESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 + +S + L + +R + L L + + Sbjct: 239 LDDRTASERFSNPQAIAVWRLPETIKRTEAAGFSSI-PFRLRLQQVLATPL--LFAAMSV 295 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 + AA L+R +++ F F+ F+ + + + P + + I ++ Sbjct: 296 LAAAFSLRLMRLGGLAGLAGAGVTLGFAFFF-FNELCGALGKADVLTPAMAAWTPPIVAL 354 >gi|162148705|ref|YP_001603166.1| permease [Gluconacetobacter diazotrophicus PAl 5] gi|209545528|ref|YP_002277757.1| permease YjgP/YjgQ family protein [Gluconacetobacter diazotrophicus PAl 5] gi|161787282|emb|CAP56876.1| putative permease [Gluconacetobacter diazotrophicus PAl 5] gi|209533205|gb|ACI53142.1| permease YjgP/YjgQ family protein [Gluconacetobacter diazotrophicus PAl 5] Length = 377 Score = 71.9 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 49/366 (13%), Positives = 111/366 (30%), Gaps = 19/366 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 Y+ R + L + ++ + ++ +L+++ + + L L P +L Sbjct: 15 GVLTRYLTRELAGRILTAGAILLALMEILALLEQLTPILERHQGLRGALYFMALHAPLLL 74 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + + +L M +E+ I+ G + L++ +L + L + + ++ + Sbjct: 75 GSIFPLAVLIGSLVMLVHMTTASEIAILRAAGLTTPALVRLMLPAVLGLGLAATLIDDQV 134 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENL-FFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + + LT + E F+ + + G+ V RD Sbjct: 135 TPRAELALARW-----WNLTDPHPEAGRSFWFRSGTTLVDVGYVAQGGRELGMVDVYGRD 189 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 A G D P + + + L Sbjct: 190 GSGRLSRVAHLGGAHYANGEWTGTDARGLTVLPSEVIPAPAEPAAEAAGPMRGLGWPAGL 249 Query: 241 KANDQNLSFLLNPNPN---------NPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 + +D + P + + R+ R L ++ L++I Sbjct: 250 RPDDMVRLSMDTPPLAASTMVAMMRDRAPSTQPPAALRTALLGRALTPLTFMVMLLLAIP 309 Query: 292 AA--DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 R+ R + + L F VF G + P L + ++ Sbjct: 310 VVYIPPRSGTRSWLPVWCLGAGL--LFVVFQGLLQALGNAGSLPALAATLPGIVIFTFAV 367 Query: 350 FLLMIK 355 LM++ Sbjct: 368 SALMLR 373 >gi|218460846|ref|ZP_03500937.1| putative permease protein [Rhizobium etli Kim 5] Length = 362 Score = 71.9 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 46/361 (12%), Positives = 113/361 (31%), Gaps = 24/361 (6%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTV 60 + Y R + + IA+++ + +S ++ + ++ +P + Sbjct: 4 GTLSRYFFRRYLATTAWFLIGASAIAFLLDFSETAGRMSGLPGYTIGGGIVMTAVRLPLI 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L PF VL +NR EL++ G S + P + ++ L + + N Sbjct: 64 LQQTIPFVALFVGMTVLIGLNRKYELVVTRAAGISVWQFMFPFVAGSLALGVLTTTALNP 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEEN----LFFRLDDDLYIKISKYNPNNT--LQGIF 174 + + + + + DD+ I N T + + Sbjct: 124 LAAWGQRQALLVESDWRGENAVLRKAPQIPWLRQISGRDDVIIGAQTVQENGTKLVDAVL 183 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI----SKDISIMKFKSYTLQT 230 I + A + ++ + +G V RK + + Sbjct: 184 IHFDSSGRVIMRQDAATAKLEDGYWQL---NGVVERKPGEIPLRKASVQLRT------NL 234 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 + + L N ++ + ++F+ L+Q L V LI+ Sbjct: 235 KQDFVQERLTAPETIGFFDLSNRIAAAKSF-GISTKALETQFNSLLSQPLLLVAMTLIAA 293 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 + K + Q + + I + F ++ + ++ + P + ++ + ++ Sbjct: 294 TVSLKFSRFNQSRSV--ILGGILSGFMLYVI-TVLVKAFGSSGVVPPFVATWIPVVVALA 350 Query: 351 L 351 L Sbjct: 351 L 351 >gi|15618904|ref|NP_225190.1| hypothetical protein CPn0996 [Chlamydophila pneumoniae CWL029] gi|15836527|ref|NP_301051.1| hypothetical protein CPj0996 [Chlamydophila pneumoniae J138] gi|16752031|ref|NP_445397.1| hypothetical protein CP0859 [Chlamydophila pneumoniae AR39] gi|4377325|gb|AAD19133.1| CT839 hypothetical protein [Chlamydophila pneumoniae CWL029] gi|7189771|gb|AAF38648.1| conserved hypothetical protein [Chlamydophila pneumoniae AR39] gi|8979369|dbj|BAA99203.1| CT839 hypothetical protein [Chlamydophila pneumoniae J138] Length = 357 Score = 71.5 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 46/325 (14%), Positives = 111/325 (34%), Gaps = 13/325 (4%) Query: 40 SSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITL 99 + + +L++ Y IP +LP + P + ++ ++ N + + +G S+ + Sbjct: 39 IAKDVPYDTVLRLMAYQIPYLLPFILPGSCFVSAFSLFRKLSDNNHMTFLRASGASQSII 98 Query: 100 IKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI 159 + PVL ++ + F + + + CR + A + L+ + +++ Sbjct: 99 MFPVLMVSGAICCLNFYTCSELASICRYQTCKEIANMAMTSPALLLQ--TLQKKENNRIF 156 Query: 160 KISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD-- 217 + + + + + + + +S D + + D K P S Sbjct: 157 IAVDHCAKSKFDNVIVALKGNNEISHVGIIKSIIPDTTKDTVKAKDVVFISKLPDSLTES 216 Query: 218 --ISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKR 275 S +F TL T L A L + P + L ++ E +R Sbjct: 217 SSPSSQRFYIETLDELLIPKITSTLFAGKSYLKTRTDYLPWKQLVKQSLKHSHLPETLRR 276 Query: 276 LTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY 335 + + ++ + R+ I+L F + I+ K +N Sbjct: 277 VAIGFLCITLTYAGMILGIHKPRFRKS-------IALYFIFPILDLILLIVGKNTKNLPL 329 Query: 336 IPILYLFLFCISSIFLLMIKKKYTK 360 +L++F +S + + ++ Sbjct: 330 AFMLFVFPQLVSWVVFAARAYRESR 354 >gi|46198338|ref|YP_004005.1| hypothetical protein TTC0030 [Thermus thermophilus HB27] gi|46195960|gb|AAS80378.1| hypothetical membrane spanning protein [Thermus thermophilus HB27] Length = 336 Score = 71.5 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 55/352 (15%), Positives = 117/352 (33%), Gaps = 30/352 (8%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 Y+LR + +L+ + + ++ S + + Y +P L + Sbjct: 2 LGRYVLREVLVPYLVGVFLFAALLTFDLLSSLSGVLLSRGVGAREVGLLVLYRLPWTLSL 61 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P L + R +EL G + L++P++ LA+ +S+ ++ + P Sbjct: 62 ALPLGLVFAVLVGLAGLIRRSELKAAYAAGVPPLALLRPLVLLALAVSLLNLLNLAELRP 121 Query: 124 KCRSTIKQLSAKAQL--ALTFSYLEENLFFRLDDDLYIKISKYNP---NNTLQGIFIVDS 178 + + +L + L ++ +Y + P N L+G+ +VD Sbjct: 122 RSQEAYDRLLGRILYGEGGASGVLRRQVYAPPGLGVYF-AEEVYPEPEGNRLRGVRVVDE 180 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 R ++Y A+ G D + + G V + ++ F + S Sbjct: 181 R----GRVYSAEEGLWDEEGWRL---KGYVVEGEEVRPFEGVLPFPA----RFRPKESLG 229 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 D L R ++ R FH+RL L G + + AA Sbjct: 230 SRDPYDSTPLEELW-------ARAQVEPEARFAFHRRLADAL-----GGLVLGAAAAALG 277 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 + R+ + + FG + ++ + + + YL ++ Sbjct: 278 LSLREAAWAFLGVVLLIFGYYVLWTLAAQLARYDVSPL-LAYLPDLFYGALA 328 >gi|268679754|ref|YP_003304185.1| permease YjgP/YjgQ family protein [Sulfurospirillum deleyianum DSM 6946] gi|268617785|gb|ACZ12150.1| permease YjgP/YjgQ family protein [Sulfurospirillum deleyianum DSM 6946] Length = 341 Score = 71.5 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 50/324 (15%), Positives = 108/324 (33%), Gaps = 15/324 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+L+ G F + FI ++ ++ L + + L + YL+P Sbjct: 1 MNRTSRYLLKHFGALFSSLFFILFFITSIVFFIKITALTAIIQMNFLELGTLYIYLLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P F + L ++++ E +++ G + + + L LA LS+ L ++ + Sbjct: 61 LVYTLPITFFIALCITLFNLSKENETIVLFTLGYNPQKIARLFLLLATGLSLLLILNIFV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A ++ + F + + I K + G+ + Sbjct: 121 LIPIS-KELNSNFIDYKKAEAKFNIKASEFGQKFSQWLVYIEKSDDQKHFSGVTLYQVPT 179 Query: 181 TQTH-KIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 ++ A + I+ + LN E +I + F+ + ++ + Sbjct: 180 PNEDERLILANNALIENTDGKLRLNLEEGKIFEFKKNEIEQINFERMHINSQPKAGIGTI 239 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + +N E L LFP+ LI++ Sbjct: 240 QSVKEYWNGVFVNSKRAY-------------ELAFFLLIALFPLASTLIALSIGIVTYRY 286 Query: 300 RQRKKIHPIFISLSISFGVFWGFS 323 + +F ++ I F FS Sbjct: 287 NKGGIYIAMFATIFIYFAAATLFS 310 >gi|260576762|ref|ZP_05844747.1| permease YjgP/YjgQ family protein [Rhodobacter sp. SW2] gi|259021014|gb|EEW24325.1| permease YjgP/YjgQ family protein [Rhodobacter sp. SW2] Length = 364 Score = 71.5 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 53/359 (14%), Positives = 112/359 (31%), Gaps = 18/359 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + LYI R L L I +I L ++ +S SL ++ +P+ L Sbjct: 2 TLSLYIARRFVWLLLGIILGFATILLLIDSLDQLRRLSGQGISLGQATLLAAMNMPSSLY 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + + + R++EL+++ +G S + + + A+L N + Sbjct: 62 RILPLLMILAAITLFMGLARSSELVVVRASGRSGLRFLATPVLAALLFGAVAVAVLNPLV 121 Query: 123 PKCRSTIKQLSAKAQLA--LTFSYLEENLFFR---LDDDLYIKISKYNPNNT-LQGIFIV 176 L +K S ++ L+ R D I ++ N + T L + + Sbjct: 122 AATLKRYDTLLSKYAQDGESVLSINDDGLWLRQGGPDGQTVIHAARANADGTELFSVTFL 181 Query: 177 DSRDTQTHKIYY-AQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 A+ + A++ + + Sbjct: 182 SFDAAGLPSARTEAREARLGDGAWALVDAKTWPLNLANPEASAARETGTRLPSDLTRDAI 241 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLET-YRSEFHKRLTQ---WLFPVIFGLISIV 291 ++ L P+Y L + + H+ Q L ++ ++ I Sbjct: 242 RDSFGTPAAISIWNL-------PSYIAGLERAGFSARSHRVWLQTELALPLLLAAMVLIA 294 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 A R K + ++L FG+F+ ++ E I + + +F Sbjct: 295 AGFTMRPTRSGKTGTYVLLALLGGFGIFFLRNFAQVLGENGQIPIAMAAWSPPAAAVLF 353 >gi|15834847|ref|NP_296606.1| hypothetical protein TC0227 [Chlamydia muridarum Nigg] gi|270285013|ref|ZP_06194407.1| hypothetical protein CmurN_01133 [Chlamydia muridarum Nigg] gi|270289036|ref|ZP_06195338.1| hypothetical protein CmurW_01188 [Chlamydia muridarum Weiss] gi|301336411|ref|ZP_07224613.1| hypothetical protein CmurM_01210 [Chlamydia muridarum MopnTet14] gi|7190266|gb|AAF39099.1| conserved hypothetical protein [Chlamydia muridarum Nigg] Length = 354 Score = 71.1 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 47/318 (14%), Positives = 116/318 (36%), Gaps = 14/318 (4%) Query: 40 SSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITL 99 + + +++ Y IP +LP + P + + ++ N ++ + +G S+ + Sbjct: 39 IAKDVPYATVFRVTAYQIPYLLPFILPASCFISAFTLFRKLSDNNQITFLKASGASQGMI 98 Query: 100 IKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI 159 I P+L + +L F F + + + CR + A + L+ + ++D Sbjct: 99 IFPILITSGILCCFNFYTCSELASICRFQTGKEIANIAMTSPALLLQ--TLQKKENDRIF 156 Query: 160 KISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSP---ISK 216 + + + I + + I + ++ D+++ ++ + V K P ++ Sbjct: 157 IAIDHCGKSKFDNVIIALKHNQEISNIGFVETIIPDVNKDSVQAKNVLVISKVPLFSEAR 216 Query: 217 DISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRL 276 + +F TL T L A + + P + + + +E +R+ Sbjct: 217 TSNPNEFYLETLDELFIPKITATLFAGKSYMKARTDYLPWKQLIQD--VHLHLAEILRRV 274 Query: 277 TQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 L + + R+ I+ +F L++ F + + K +P Sbjct: 275 AIGLLCSTMTFSGLALGTYKPRFRKPVLIYVLFPVLNLIFLI-------VGKNTTHPISA 327 Query: 337 PILYLFLFCISSIFLLMI 354 +L+LF +S + Sbjct: 328 LMLFLFPQLLSWLIFSWR 345 >gi|171059278|ref|YP_001791627.1| permease YjgP/YjgQ family protein [Leptothrix cholodnii SP-6] gi|170776723|gb|ACB34862.1| permease YjgP/YjgQ family protein [Leptothrix cholodnii SP-6] Length = 368 Score = 71.1 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 45/373 (12%), Positives = 117/373 (31%), Gaps = 21/373 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + + R I + + + + + I + + + +P Sbjct: 1 MHTIRRLLYREILGATGYVMVAFLGLFFFIDFMAELENIGQHGYGAAQAALACLLQVPGH 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + L + ++E I+ G + + +L + + F+ + Sbjct: 61 VYELAPIAVLIGAIYALARLAHSSEFTILRTGGLGPGLALLLLTWLGLGFAAITFVIGDF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTF----SYLEENLFFRLDDD---LYIKISKYNPNNTLQGI 173 + P C + L A+A L+ ++L+++ D + + + L+ + Sbjct: 121 VAPWCDTQATLLQARASGNLSVASGGAWLKDS--ASAADGEHRYTVNFAAARSDGELEKV 178 Query: 174 FIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEV-HRKSPISKDISI-MKFKSYTLQTE 231 I + ++ D L D + H S + + K S+ Q+ Sbjct: 179 RIFEFGPKGALITRTTAERAVIGDDGTWQLTDVRISHWTSDHTPRLDADEKLASHVWQSG 238 Query: 232 SANS--STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 + + VL + L N + + + Y +F K+ ++ ++ Sbjct: 239 LTRNVVAAAVLPLRTMSTLALYN-YMTHLADHEQAAQRYEIQFWKKALYPFACLV--MMG 295 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFW---GFSYIIHKIEQNPYYIPILY--LFLF 344 + R +F + + G S++ P+ +FL Sbjct: 296 LALPFAYLHGRSGGIGLMVFGGIMLGIGFVLLNNLSSHLGLLQNWTPWLAASAPSAIFLL 355 Query: 345 CISSIFLLMIKKK 357 + F +++ + Sbjct: 356 LSLAAFSWLVRYR 368 >gi|49475338|ref|YP_033379.1| hypothetical protein BH05440 [Bartonella henselae str. Houston-1] gi|49238144|emb|CAF27352.1| Hypothetical transmembrane protein [Bartonella henselae str. Houston-1] Length = 365 Score = 71.1 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 55/363 (15%), Positives = 112/363 (30%), Gaps = 27/363 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + Y + I +A +I + +SS + IS IP ++ Sbjct: 5 TLGQYFFIRYLKMTCYFLGGIFVLALLIDFTENSGRLSSLPRYTAKDAFLISVLRIPFIM 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF +L S+NR +EL++ + G S + P F A L +F + N + Sbjct: 65 QQLIPFIALFSAMAMLISLNRKSELVVTRSIGISAWQFLMPACFGAFLFGLFSILLVNPL 124 Query: 122 EPKCRSTIKQLSAK--AQLALTFSYLEENLF-----FRLDDDLYIKISKYNPNN--TLQG 172 S +++ + ++ + L I + Sbjct: 125 AAWGFSQAERMMTEWRSKNNNVLTSLHNTRILWLTQRTHSGRTTIGAKSITDQGLSLIDA 184 Query: 173 IFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 F+ + + ++ ++ A +L DG +++ + KF +QT Sbjct: 185 TFVQYNDNATIKNWINSRKATLING--AWLLTDGTIYKIGHPPE-----KFSELQIQTTL 237 Query: 233 ANSSTIVLKANDQNLSFLLNPNP----NNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 N + F P + Y + Y + + LI Sbjct: 238 KPEFLTERLVNPATIPFYQLPTKIMIARSFGYSANNFDMYLQSL---IALPALLIAMTLI 294 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 + A R + I + F ++ S ++ Y PI+ + + Sbjct: 295 A--AVVSLNFTRFGQSKILILGGVIAGFSLYVI-SILVQAFGNAGYIPPIIAAWTPVFIA 351 Query: 349 IFL 351 +FL Sbjct: 352 LFL 354 >gi|13476525|ref|NP_108095.1| hypothetical protein mll7865 [Mesorhizobium loti MAFF303099] gi|14027286|dbj|BAB54240.1| mll7865 [Mesorhizobium loti MAFF303099] Length = 360 Score = 71.1 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 51/376 (13%), Positives = 107/376 (28%), Gaps = 50/376 (13%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + Y + L ++ + ++I + + + + ISG +P ++ Sbjct: 4 TLGRYFFFRYVTITIWFFLGLLALVFLIDFTELSGRTTGLPGFTYGTAVAISGLRMPMIM 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PF L S+NR EL+I + G S + P A+L N + Sbjct: 64 LQTVPFVGLFSAMATLVSLNRRYELVIARSAGVSAWQFLLPCCIGALLFGFVSVGLINPL 123 Query: 122 EPKCRSTIKQLSAKAQLAL-------TFSYLEENLFFRLDDDLYIKISKYNPNN-TLQG- 172 S +Q+ + + ++ + D I + Sbjct: 124 AAHAFSLSEQIETQLRSGKSNTVSADAAPWIRQKT---STGDTIIGARAILNQGLEMSDA 180 Query: 173 IFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 +F V + + A L DG + + F++ T+Q + Sbjct: 181 VFFVLDQQGNIVERKDAAHAY---------LRDGYWELQDVKT-------FRNGTIQPSA 224 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYR-----------PELLETYRSEFHKRLTQWLF 281 ++ LK + + L P Y + +F + Sbjct: 225 SDRVPTNLKP--EFVQERLARPETIPFYDLPGKIEVARSFGLKANAFAMQFDSLVALPFL 282 Query: 282 PVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFW------GFSYIIHKIEQNPYY 335 V LI+ A R + I + F ++ F + Sbjct: 283 LVAMTLIA--ATVSMRFARMGQSATMILGGVVAGFLLYVVSVLVKAFGVAGFVPTAIAAW 340 Query: 336 IPILYLFLFCISSIFL 351 +P++ F ++ + Sbjct: 341 VPVVVAMFFGVTFLLY 356 >gi|33242365|ref|NP_877306.1| hypothetical protein CpB1034 [Chlamydophila pneumoniae TW-183] gi|33236876|gb|AAP98963.1| hypothetical protein CpB1034 [Chlamydophila pneumoniae TW-183] Length = 357 Score = 71.1 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 46/325 (14%), Positives = 110/325 (33%), Gaps = 13/325 (4%) Query: 40 SSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITL 99 + + +L++ Y IP +LP + P + ++ ++ N + + +G S+ + Sbjct: 39 IAKDVPYDTVLRLMAYQIPYLLPFILPGSCFVSAFSLFRKLSDNNHMTFLRASGASQSII 98 Query: 100 IKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI 159 + PVL ++ + F + + + CR + A + L+ + +++ Sbjct: 99 MFPVLMVSGAICCLNFYTCSELASICRYQTCKEIANMAMTSPALLLQ--TLQKKENNRIF 156 Query: 160 KISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD-- 217 + + + + + + + +S D + + D K P S Sbjct: 157 IAVDHCAKSKFDNVIVALKGNNEISHVGIIKSIIPDTTKDTVKAKDVVFISKLPDSLTES 216 Query: 218 --ISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKR 275 S +F TL T L A L + P + L + E +R Sbjct: 217 SSPSSQRFYIETLDELLIPKITSTLFAGKSYLKTRTDYLPWKQLVKQSLKHPHLPETLRR 276 Query: 276 LTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY 335 + + ++ + R+ I+L F + I+ K +N Sbjct: 277 VAIGFLCITLTYAGMILGIHKPRFRKS-------IALYFIFPILDLILLIVGKNTKNLPL 329 Query: 336 IPILYLFLFCISSIFLLMIKKKYTK 360 +L++F +S + + ++ Sbjct: 330 AFMLFVFPQLVSWVVFAARAYRESR 354 >gi|226946454|ref|YP_002801527.1| YjgP/YjgQ family permease [Azotobacter vinelandii DJ] gi|226721381|gb|ACO80552.1| permease YjgP/YjgQ family [Azotobacter vinelandii DJ] Length = 356 Score = 71.1 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 44/359 (12%), Positives = 117/359 (32%), Gaps = 14/359 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ E Y+L + F + ++ + + ++ ++ + + L L+++ +P Sbjct: 1 MRILERYLLGNLLLGFAAAAALLLPLFSTLDLVGELDDIGDAGYRLGQALQVTLMTLPRR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + PF + L ++ + EL ++ G S + L LL+ L + Sbjct: 61 AVELGPFIALLGGIAALGQLSMSQELSVLRTAGVSATRIGLTALLAGTLLAGGLGALDEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQ--GIFIVDS 178 + + +L A A+ +++ + D ++I IF D Sbjct: 121 VASPLQQKAIKLRAYAKPDND----KDDSIWARKDGQVVRIGSLATGRVPNHLEIFRFDE 176 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + + A I L+D + R S + + ++ + + + Sbjct: 177 SN-RLQEYILADRAEIQPGG-LWQLHDVRLKRWSDEGESVERLERLEWRAILPDSRLDEV 234 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 L + L + + + ++L + + L ++ Sbjct: 235 TLPPASLSARQLRG-YVHFLQNTGQPSIQFEIALWQKLGVPILTLAMILFALPFTFAP-- 291 Query: 299 VRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 VR + + + V+ G + ++ N + +L + ++ L+ Sbjct: 292 VRSTGLGSRLALGAVMGLLVYIGNESLVSLGQLLKLNAMLVGLLPALVLLGMALALVRR 350 >gi|167947877|ref|ZP_02534951.1| hypothetical protein Epers_15577 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 109 Score = 70.8 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 13/90 (14%), Positives = 39/90 (43%), Gaps = 2/90 (2%) Query: 80 MNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC-RSTIKQLSAKAQL 138 M+R++E++ + G + +P+L A+ +++ + ++EP R + ++A+ Sbjct: 1 MHRDSEMIALQACGVGGWRVFRPILMAAVPMALLVAWLSMVVEPWGTRLKAEIIAAQKGQ 60 Query: 139 ALTFSYLEENLFFR-LDDDLYIKISKYNPN 167 + F +L + ++ + Sbjct: 61 TSALPGVSPGRFNEYSRGNLVFYVESFSAD 90 >gi|149201834|ref|ZP_01878808.1| permease, YjgP/YjgQ family protein [Roseovarius sp. TM1035] gi|149144882|gb|EDM32911.1| permease, YjgP/YjgQ family protein [Roseovarius sp. TM1035] Length = 378 Score = 70.8 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 55/359 (15%), Positives = 128/359 (35%), Gaps = 18/359 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 E Y R SF+ + ++ I +I ++ + + +L I +P Sbjct: 17 ILERYFGRRFFVSFMGVTITMLVIMGLIDLMDELGDFPE--LAFGQVLGIVLLKLPEAYY 74 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + + + + R++E++++ +G S + + +A+ + + N + Sbjct: 75 EIIPLVMILASVALFLRLARSSEMVVLRASGRSALRGLLAPAAVALAIGLLGLAVGNPLV 134 Query: 123 PKCRSTIKQLS--AKAQLALTFSYLEENLFFR---LDDDLYIKISKYNPN-NTLQGIFIV 176 L Q + E L+ R I ++ + + +TL G Sbjct: 135 AATAKRHHDLVNTYSGQTYSDLAIASEGLWLRQGGTAGQTVIYAARSSSDLSTLYGPSFY 194 Query: 177 D-SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 D + D Q + A + ++ A +L D ++ + + + M + L S + Sbjct: 195 DFAPDGQPLRRISASTARLETG--AWLLEDAKIWDLA-ENINPEAMARQEAQLSVPSDLT 251 Query: 236 STIVLKANDQNLSFLLNPNP---NNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 +L + + P + Y F L Q +F + L+ I A Sbjct: 252 QDRILDSFGSPEYIPIWELPKFIDQLEEAGFSARRYAIWFQSELAQPVF--LVALVLISA 309 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 A R + ++ + FG+ + ++ H + +N +L + ++S+F+ Sbjct: 310 ALTMGHTRGANVGLSVLTAVLLGFGLHYVRNF-AHILGENGQLPILLAAWAPPVASLFI 367 >gi|163853055|ref|YP_001641098.1| permease YjgP/YjgQ family protein [Methylobacterium extorquens PA1] gi|218531865|ref|YP_002422681.1| permease YjgP/YjgQ family protein [Methylobacterium chloromethanicum CM4] gi|240140388|ref|YP_002964867.1| putative permease [Methylobacterium extorquens AM1] gi|254562992|ref|YP_003070087.1| permease [Methylobacterium extorquens DM4] gi|163664660|gb|ABY32027.1| permease YjgP/YjgQ family protein [Methylobacterium extorquens PA1] gi|218524168|gb|ACK84753.1| permease YjgP/YjgQ family protein [Methylobacterium chloromethanicum CM4] gi|240010364|gb|ACS41590.1| putative permease [Methylobacterium extorquens AM1] gi|254270270|emb|CAX26266.1| putative permease [Methylobacterium extorquens DM4] Length = 362 Score = 70.8 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 49/327 (14%), Positives = 114/327 (34%), Gaps = 18/327 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTVL 61 + Y R+ L L + + + + ++ + + S ++ +++ Y P V Sbjct: 6 TLGRYFAWRFVRTILGVFLTVFALVYTLDFVELLRRAGDAEGASPGLMAQLALYRTPAVA 65 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 V PF + L ++R EL++ G S ++P F+A+ + + N + Sbjct: 66 ESVLPFAVLFGSMAALLQLSRKLELVVARAAGISAWQFLQPGAFVALAIGALAIGAYNPL 125 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 + +KQ S++ + + + DL+++ + ++ V+ T Sbjct: 126 S----AALKQRSSEIEAKIFAKSTKAGT----GKDLWLRQRSIDGQAIIRAETAVEGTTT 177 Query: 182 QTHKIYY----AQSGSIDLDRQAIILNDGEVHRKSPI--SKDISIMKFKSYTLQTESANS 235 + A + + L+ L+DG + ++D + Y + + S Sbjct: 178 LAGVTVFQFDEAGAFAAQLEAARATLHDGWWELRDVRVLTRDEPPESHEVYLVASTLDPS 237 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPEL-LETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 +++ F P + R L YR ++ L L + L++ A Sbjct: 238 QIRQRFTPPESVPFWQLPETIARHERAGLDATRYRLQYDVLLATPLLYLAMVLVA--ATV 295 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWG 321 R + +S F ++ Sbjct: 296 SLRFFRFGGVGKLVLGGVSAGFVLYVA 322 >gi|240850231|ref|YP_002971624.1| putative permease, YjgP/YjgQ family [Bartonella grahamii as4aup] gi|240267354|gb|ACS50942.1| putative permease, YjgP/YjgQ family [Bartonella grahamii as4aup] Length = 363 Score = 70.8 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 52/361 (14%), Positives = 111/361 (30%), Gaps = 25/361 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + Y + I +A +I + +SS + +S IP ++ Sbjct: 5 TLGRYFFIRYLKITCYFWGSIFVLALLIDFTENSGRLSSIPHHTAKDAFFLSVLRIPFIM 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF L S+N+ EL++ + G S + P A LL +F + N + Sbjct: 65 QQLIPFIALFSAMATLISLNKKLELVVTRSIGVSAWQFLMPACLGAFLLGLFSILLINPL 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLF-----FRLDDDLYIKISKYNPNN--TLQGIF 174 S ++ + + + L I L F Sbjct: 125 AAWGFSQAEKKMTEWRNNNVLTPLHNTDIHWLTQRTNLGRTTIGAKFITDQGLSLLDATF 184 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + + + ++ + +L +G +++ + ++++ ++T Sbjct: 185 VQYNDNATVKNWINTPKATL--TNGSWLLTNGTIYKIGHPPEKFTVLQ-----IKTNLKP 237 Query: 235 SSTIVLKANDQNLSFLLNPNP----NNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 AN + F P + Y + Y F + V LI+ Sbjct: 238 EFLTERLANPATIPFYQLPKKIMIARSFGYSANNFDMY---FQSLIALPALLVAMTLIA- 293 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 A R + I + F ++ S ++ Y PI+ + + ++F Sbjct: 294 -ATVSLNFTRFGQSRTLILGGVIAGFMLYVI-SVLVQAFGNAGYIPPIIAAWTPVVIALF 351 Query: 351 L 351 L Sbjct: 352 L 352 >gi|320449377|ref|YP_004201473.1| putative permease, YjgP/YjgQ family [Thermus scotoductus SA-01] gi|320149546|gb|ADW20924.1| putative permease, YjgP/YjgQ family [Thermus scotoductus SA-01] Length = 368 Score = 70.8 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 26/201 (12%), Positives = 64/201 (31%), Gaps = 5/201 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + ++L+ L++ LF+ + + L + + Y +P VL Sbjct: 2 TLYRHLLKESLPVLLLALLFLTAVYLFGFFYAGARWL--EGVPLWKVARWLSYHVPGVLV 59 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 V P T V ++ + + G P++ + LLS + + Sbjct: 60 QVFPIALVTTTVLVFGRLSAEGAQFALLSGGVPLWRAALPLVGIGALLSGVALYLQERLV 119 Query: 123 PKCRSTIK-QLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSRD 180 P ++ + + + L + + ++ + G+ I + Sbjct: 120 PHYNEKVRVAWWDEIHTQGAGLFRLKGLQIPIGKGRNLYFEDFDMEKKEMVGVRIASFQ- 178 Query: 181 TQTHKIYYAQSGSIDLDRQAI 201 + +A+ GS + R + Sbjct: 179 GEEGTFLFAERGSWEDKRITL 199 >gi|87306338|ref|ZP_01088485.1| hypothetical protein DSM3645_08402 [Blastopirellula marina DSM 3645] gi|87290517|gb|EAQ82404.1| hypothetical protein DSM3645_08402 [Blastopirellula marina DSM 3645] Length = 379 Score = 70.8 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 52/136 (38%), Gaps = 5/136 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTE-----SLNILLKISGY 55 M + Y+L +SFL+ + + VI ++ E + IL Sbjct: 1 MYIIDRYLLTQFIKSFLIFFISFTGLYVVIDSFNNLDEFLRYGEQTGRGAFPILFDYYTP 60 Query: 56 LIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLF 115 I T M + +T + R+ E+ + G ++ +++PV+ L++I Sbjct: 61 RIFTFFNMTGGILTLIAAMFTVTWLQRHNEMTALMAAGITKERIVRPVIIAVGLIAILGA 120 Query: 116 ISENIIEPKCRSTIKQ 131 ++ + P+ + + Sbjct: 121 LNREFVVPEYSDALSR 136 >gi|157736891|ref|YP_001489574.1| hypothetical protein Abu_0640 [Arcobacter butzleri RM4018] gi|157698745|gb|ABV66905.1| conserved hypothetical membrane protein [Arcobacter butzleri RM4018] Length = 355 Score = 70.8 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 60/366 (16%), Positives = 125/366 (34%), Gaps = 24/366 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YIL+ +F++ + + I LQ + + S N+ L Y Sbjct: 1 MSILSKYILKKYLINFIIVLISLELFFVGIDYLQNFKNIPA---SANLQLLYILYNSFFT 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P L +N E + + G +R + PV+ ++I S+ + + Sbjct: 58 LTLALPLSIVFGWIVTLVLFIKNNEFVAFNALGATRKNIFMPVVIVSI--SLLITLIFLQ 115 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSR 179 + P S + K FS + ++F + ++ Y+ K P + I I + Sbjct: 116 MTPLAYS--YEQKRKILNDEYFSNTKSDIFLKYNE-YYVYFQKLLPLEKKAENIHIYKVK 172 Query: 180 DTQTHKIYYAQSGSIDLDRQAI----ILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + + D+ + ++N E + D+ KF +TL+ Sbjct: 173 GDNLVETIIGEKAYFQNDKWYVVDVKVINKPENIDINNSKLDVRYEKFL-HTLEGFKPKI 231 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLF--PVIFGLISIVAA 293 V ++ + + R+ + +L F P++ + S + Sbjct: 232 LDNVYESKSDFSIMDAVSALILLKDQGMNTQKIRTILYNQLIIPFFVIPILILVYSFASL 291 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP---ILYLFLFCISSIF 350 + R + IF +L + WGF +++ ++ + IP +L + Sbjct: 292 NSRFFNMAKFVSFSIFGTLIV-----WGFFFLVFRLTSSGTVIPEISMLLTMFIWVIFSI 346 Query: 351 LLMIKK 356 KK Sbjct: 347 YFYNKK 352 >gi|62185346|ref|YP_220131.1| hypothetical protein CAB733 [Chlamydophila abortus S26/3] gi|62148413|emb|CAH64180.1| conserved hypothetical membrane protein [Chlamydophila abortus S26/3] Length = 357 Score = 70.4 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 49/316 (15%), Positives = 105/316 (33%), Gaps = 13/316 (4%) Query: 40 SSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITL 99 + +L+++ Y IP +LP + P + ++ ++ N ++ + +G S+ + Sbjct: 39 IAKDVPYPTVLRLTAYQIPYLLPFILPISCFISAFSLFRGLSDNNQITFLKASGASQAII 98 Query: 100 IKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI 159 PVL ++ + F + + + CR + A + L+ + + + Sbjct: 99 TFPVLMVSCAICCVNFYTCSELASICRFQTCKEIANMAMTSPTLLLQ--TLQKKESNRIF 156 Query: 160 KISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDIS 219 + + + RD + + ++ D+ + + K P + Sbjct: 157 ITVDHCAKSKFDNVITALKRDKEIANVGLIKTIIPDVANDTVQARGVVMISKLPSTLTDQ 216 Query: 220 IMKF-KSY---TLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKR 275 K Y TL T L A + + P + TY E +R Sbjct: 217 CSSHSKEYYIETLDEMLIPKITSTLFAGKSYMKTRTDYLPWKQLVKQSFSHTYLPETLRR 276 Query: 276 LTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY 335 + L + +V + R+ I+L F V I+ K + + Sbjct: 277 IGIGLLCITLTYSGMVLGTYKPRFRKS-------ITLYCIFPVMDLILLIVGKNTSSLFP 329 Query: 336 IPILYLFLFCISSIFL 351 L++F IS I Sbjct: 330 ALTLFIFPQVISWIVF 345 >gi|153004269|ref|YP_001378594.1| permease YjgP/YjgQ family protein [Anaeromyxobacter sp. Fw109-5] gi|152027842|gb|ABS25610.1| permease YjgP/YjgQ family protein [Anaeromyxobacter sp. Fw109-5] Length = 360 Score = 70.4 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 40/359 (11%), Positives = 106/359 (29%), Gaps = 15/359 (4%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y+ R +F+ + +V I + + + + + L++ V+ V P Sbjct: 6 YVARRTLNAFVGALAGVVAIFLAVDFVDNSAAFTGPGWAPAV-LELYVNKAAVVVRQVAP 64 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + +++ R E + G L PV+ + +L L + ++ + Sbjct: 65 AAMILGAGIAVSTFRRTREYTAMRAVGLGPWRLAVPVVAVTLLAGGALLLVHDLWGVEAA 124 Query: 127 STIKQLSA-----KAQLALTFSYLEENLFFRLDDDLYIK-ISKYNPNNTLQGIFIVDSRD 180 +++ A + E +FR D + + +P + +++ + Sbjct: 125 QRAEEIQALRFGRGGDRRRFEAAREPKRWFRGGDGRRVYHLRGTSPEGGFAHVTVLEVSE 184 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-DISIMKFKSYTLQTESANSSTIV 239 + + + + +L E P + + Y + + Sbjct: 185 A-FRLVRRVDAERMRPEGDRWLLEHVEDRTFLPDGTVRVERAASRRYDFPEPPDAFAVVP 243 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + LL+ + + E + RL + A Sbjct: 244 GRPTQMRWQTLLSQ-IGIRRRLGLPVAELQLERYNRLAYPFA--GVPGAMLALALALRRN 300 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYI--IHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R+ + S+ +S +FWG + + + + + L +++ Sbjct: 301 RKGHIAAALVESVGVSL-LFWGTQGVTWAMGLSGHVAPWVAAWAPNLVFLVVGALAVRR 358 >gi|15639868|ref|NP_219318.1| hypothetical protein TP0883 [Treponema pallidum subsp. pallidum str. Nichols] gi|189026106|ref|YP_001933878.1| hypothetical protein TPASS_0883 [Treponema pallidum subsp. pallidum SS14] gi|3323200|gb|AAC26573.1| conserved hypothetical integral membrane protein [Treponema pallidum subsp. pallidum str. Nichols] gi|189018681|gb|ACD71299.1| hypothetical integral membrane protein [Treponema pallidum subsp. pallidum SS14] Length = 365 Score = 70.4 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 54/351 (15%), Positives = 120/351 (34%), Gaps = 13/351 (3%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 +L F + + I I IL + S+ + L+KI IP + + P Sbjct: 1 MLDMFLPIFFLVLVCASMILDAIDILVNLTQFISNGYRFSSLVKIWYVSIPHYVLLCCPL 60 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 T + + E L I G S +++ P L+I +F +N + +S Sbjct: 61 SVLFAATYTVRILYVQNEFLAIHFGGLSFFSIVGPWFGFMCFLAIGIFAFDNSVVVVSQS 120 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN--TLQG-IFIVDSRDTQTH 184 ++ A+ ++ E ++ D I I+ L + I+ + + Sbjct: 121 KKDEIIAR-TVSYAQGNSENDVVASSFDGKIISIAGAYHRGQKVLVDMLVIMKNSNGTIQ 179 Query: 185 KIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAND 244 K+ A + DR +L V+ + K + S+ L+ Sbjct: 180 KLIEAHTAHWQKDR--WVLIKPVVYTITHEMKLMVSEYLDSFELREPLELFDHQDFLTKG 237 Query: 245 QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKK 304 ++ + + Y + F+K+ FP+ ++ ++ + +++R Sbjct: 238 MSIQK-IKETLHTLKYASKPHRELSIRFYKKF---YFPLTMCIMLCLSFLTGSFLKKRSL 293 Query: 305 IHPIFISLSISFGVFWGFSYIIHKIEQ---NPYYIPILYLFLFCISSIFLL 352 I IF S+ ++ + I + +P++ + F ++ Sbjct: 294 IMYIFCSVVLASAYYVVEMTSIVCAREEYFSPFWGVFFPVLTFLFLIFYVW 344 >gi|329114704|ref|ZP_08243462.1| Permease YjgP/YjgQ Family Protein [Acetobacter pomorum DM001] gi|326695970|gb|EGE47653.1| Permease YjgP/YjgQ Family Protein [Acetobacter pomorum DM001] Length = 358 Score = 70.4 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 28/203 (13%), Positives = 75/203 (36%), Gaps = 9/203 (4%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ + + +V + ++ +L++ + + +L + P +L Sbjct: 8 RYLSMALLTRVIFCGAVLVGLLEILALLEQTTPILQRHLGVQGILSFAAMRAPFLLAGAL 67 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + +LT M +E+ I+ G S L K ++ +++ + ++ + P+ Sbjct: 68 PLSVLIGALLMLTQMTLASEIAILRACGLSTFGLYKYLIPATLVIGFAGVVLDDQVTPRS 127 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQ---GIFIVDSRDTQ 182 + + + F+ D + I + + I+I D+ + + Sbjct: 128 EQALAAWWNRTDPHPENG----HAFWFHDGNRIAHIGYTSDGGNMLAKVDIYIRDT-NGR 182 Query: 183 THKIYYAQSGSIDLDRQAIILND 205 +I +A+S R +L++ Sbjct: 183 LQQILHAKSADYTHTR-GWLLHN 204 >gi|218672883|ref|ZP_03522552.1| putative permease protein [Rhizobium etli GR56] Length = 340 Score = 70.4 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 44/349 (12%), Positives = 109/349 (31%), Gaps = 24/349 (6%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTV 60 + Y R + + + I++++ + +S ++ + ++ +P + Sbjct: 4 GTLSRYFFRRYLATTGWFLIGVSAISFLLDFSETAGRMSGLPGYTIGGGIVMTAVRLPLI 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L PF VL +NR EL++ G S + P + ++ L + + N Sbjct: 64 LQQTIPFIALFVGMTVLIGLNRKYELVVTRAAGISVWQFMFPFIAGSLALGLLTMTALNP 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEEN----LFFRLDDDLYIKISKYNPNNT--LQGIF 174 + + + + + DD+ I N T + + Sbjct: 124 LAAWGQRQALLVESDWRGENAVLRKAPQIPWLRQISGRDDVIIGAQTVQENGTKLVDAVL 183 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI----SKDISIMKFKSYTLQT 230 I + A + ++ + +G V RK + + Sbjct: 184 IHFDSSGRVILRQDAATAKLEDGYWQL---NGVVERKPGEIPLRKASVQLRT------NL 234 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 + + L N ++ + ++F+ L+Q L V LI+ Sbjct: 235 KQDFVQERLTAPETIGFFDLSNRIAAAKSF-GISTKALETQFNSLLSQPLLLVAMTLIAA 293 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL 339 + K + Q + P+ + +S + + + ++ + P + Sbjct: 294 TVSLKFSRFNQSR---PVILGGILSGFMLYVITVLVKAFGSSGVVPPFV 339 >gi|219685677|ref|ZP_03540491.1| conserved hypothetical integral membrane protein [Borrelia garinii Far04] gi|219672793|gb|EED29818.1| conserved hypothetical integral membrane protein [Borrelia garinii Far04] Length = 390 Score = 70.4 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 61/164 (37%), Gaps = 3/164 (1%) Query: 44 ESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPV 103 Y +P V+ + PF + + N E+L + G S LI P Sbjct: 9 VPFLKAFIFIIYSLPMVIALSPPFASLISVILTIHKFKINNEILAFRSIGISIFDLIFPF 68 Query: 104 LFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISK 163 L +++ FIS +I+ P ++ + + + L+ + DL + Sbjct: 69 FKLGVVIVFISFISNDILLPLGSIGRLKIFNEIKEEVPHLVLKPYS-SKQYGDLIFVSGE 127 Query: 164 YNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAI--ILND 205 + N F ++R +I+ A++ I + + ILND Sbjct: 128 KSENGYKNVTFFDNTRLKGFDRIFMAKNLDIRKENFQVYFILND 171 >gi|58040479|ref|YP_192443.1| hypothetical protein GOX2051 [Gluconobacter oxydans 621H] gi|58002893|gb|AAW61787.1| Hypothetical transmembrane protein [Gluconobacter oxydans 621H] Length = 380 Score = 70.4 bits (171), Expect = 5e-10, Method: Composition-based stats. Identities = 35/221 (15%), Positives = 82/221 (37%), Gaps = 16/221 (7%) Query: 10 RCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCF 69 R + FL+ +V + ++ +L++ + + +L + +P + + P F Sbjct: 30 RALLGRFLLCGAVLVSLLEILALLEKTTPILNRHLGFRGILTFAFLHLPALSIDILPLAF 89 Query: 70 AMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTI 129 + +LT M ++E+ + G S L + +L ++ I ++ + P C + + Sbjct: 90 MVGALFLLTQMTLSSEISALRAAGLSTPALYRLLLPAVLIAGIGGTCAQYWLVPACENAL 149 Query: 130 KQLSAKAQLALTFSYLEENLFFRLDDDLY-IKISKYNPNNT-LQGIFIVDSRDTQTHKIY 187 + E+ ++I + T L+ + I + Sbjct: 150 TTWWNRTDPLAGQDGQPEDNILWFRAGPTLVRIGQIAQGGTFLRDVTIYHRDN------- 202 Query: 188 YAQSGSIDLDRQAIIL--NDGEVHRKSPISKDISIMKFKSY 226 +G + +L DG+ H ++D+S+ KSY Sbjct: 203 ---TGLLTGTEHTNVLTYRDGQWH--PDGAQDLSLSDDKSY 238 >gi|163759135|ref|ZP_02166221.1| putative permease [Hoeflea phototrophica DFL-43] gi|162283539|gb|EDQ33824.1| putative permease [Hoeflea phototrophica DFL-43] Length = 345 Score = 70.4 bits (171), Expect = 5e-10, Method: Composition-based stats. Identities = 53/348 (15%), Positives = 118/348 (33%), Gaps = 23/348 (6%) Query: 12 IGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAM 71 ++ ++ L I+ + + +R++ T + L +S +PT+L PF + Sbjct: 2 TFLTYCLAILVIILLVDFNESGRRLSAAPEYTVTTG--LLVSALRVPTILQAAIPFVVLI 59 Query: 72 ETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQ 131 + L +NR EL++ G S + P++ +L+ N + Sbjct: 60 ASIATLLQLNRKYELVVARAAGISAWQFLAPLVAANLLIGFIAVAGLNTFAASAMQWAET 119 Query: 132 LSAK-----AQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQG--IFIVDSRDTQT 183 + + AQ + + +L + D + T L G F+ D D Sbjct: 120 IIVERNLGSAQSSDSAPWLRQ---RTEQGDTVLGARASAAGGTRLSGATFFLFDE-DQNI 175 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 + A++ + + R+ S+ + ++ S ++ + + Sbjct: 176 KERLEAETAVLGDGEWVL-----TNVRRIRGSEPVEQVESASVPTSLKAEFVGESLTSPD 230 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 L + +Y +FH+ + Q LI+ + + K VR + Sbjct: 231 TVPFFELRD-KIAVAKSFGLSATSYEMQFHRLVAQPALLAAMTLIAAIVSLK--FVRFGQ 287 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + I + F ++ S +I PI+ +L + + L Sbjct: 288 SLTVILGGILAGFVLYVV-SELIQAFANAGTIPPIVAAWLPVLVASAL 334 >gi|225848308|ref|YP_002728471.1| permease, YjgP/YjgQ family [Sulfurihydrogenibium azorense Az-Fu1] gi|225643577|gb|ACN98627.1| putative permease, YjgP/YjgQ family [Sulfurihydrogenibium azorense Az-Fu1] Length = 355 Score = 70.0 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 58/364 (15%), Positives = 132/364 (36%), Gaps = 12/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI + FL+ ++ +++++ + S + N++L +P Sbjct: 1 MKILDRYIYEKLTVYFLIVFPAFSLVSVFVELIEILRK--SKVQDFNLILIYILAKLPEN 58 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V + ++ E+ I G S + ++ +I +S ++ + Sbjct: 59 FYYIVPISLIISAFVVANEIVKSREIYPILLNGISINYISTRIVIFSIFISFLQVLNLEV 118 Query: 121 IEPKCRSTIKQLSAKAQLALT--FSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 + PK + K + + NL+ RLD+ +I ++ + ++ S Sbjct: 119 LMPKSNKVYVETYQKLKNQPLEDEKAIAYNLWLRLDEKNFIYFDFFDLEKKVGKEIVLIS 178 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 D ++ S ++ ++ L G+ +D+ + KF + Sbjct: 179 MDENFLPTNRWEAESFKVESNSLTLLRGK-EITVKSIEDVKVSKFDEKKVYVSVDPEKIK 237 Query: 239 VLKANDQNLSFL-LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 L + +S L + S+F+++L + P I + ++ Sbjct: 238 KLIKEKKPVSITQLYKVAKIAQNYGYDASYFWSKFYQKLATVISPFILTVFAV-----GF 292 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + R+ K I ++ + I + PYY + LF +S F LM K K Sbjct: 293 IWRKNKFITLAGFLSTVLYWYGTSIVSAIASVGNIPYYFIFSFDVLF-LSIGFYLMFKTK 351 Query: 358 YTKI 361 + ++ Sbjct: 352 HPEL 355 >gi|55980367|ref|YP_143664.1| hypothetical protein TTHA0398 [Thermus thermophilus HB8] gi|55771780|dbj|BAD70221.1| conserved hypothetical protein [Thermus thermophilus HB8] Length = 336 Score = 70.0 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 55/352 (15%), Positives = 116/352 (32%), Gaps = 30/352 (8%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 Y+LR + +L+ + + ++ S + + Y +P L + Sbjct: 2 LGRYVLREVLVPYLVGVFLFAALLTFDLLSSLSGVLLSRGVGAREVGLLVLYRLPWTLSL 61 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P L + R +EL G + L++P++ LA+ +S+ ++ + P Sbjct: 62 ALPLGLVFAVLVGLAGLIRRSELKAAYAAGVPPLALLRPLVLLALAVSLLNLLNLAELRP 121 Query: 124 KCRSTIKQLSAKAQL--ALTFSYLEENLFFRLDDDLYIKISKYNP---NNTLQGIFIVDS 178 + + L + L ++ +Y + P N L+G+ +VD Sbjct: 122 RSQEAYDGLLGRILYGEGGASGVLRRQVYAPPGLGVYF-AEEVYPEPEGNRLRGVRVVDE 180 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 R ++Y A+ G D + + G V + ++ F + S Sbjct: 181 R----GRVYSAEEGLWDEEGWRL---KGYVVEGEEVRPFEGVLPFPA----RFRPKESLG 229 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 D L R ++ R FH+RL L G + + AA Sbjct: 230 SRDPYDSTPLEELW-------ARAQVEPEARFAFHRRLADAL-----GGLVLGAAAAALG 277 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 + R+ + + FG + ++ + + + YL ++ Sbjct: 278 LSLREAAWAFLGVVLLIFGYYVLWTLAAQLARYDVSPL-LAYLPDLFYGALA 328 >gi|126031979|gb|ABN71555.1| putative permease [uncultured bacterium] Length = 365 Score = 70.0 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 53/357 (14%), Positives = 123/357 (34%), Gaps = 20/357 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTV 60 ++ YI + + L +V + ++ +L + S S L +P + Sbjct: 9 RTLTRYIAKLFVVRVVGVLLMLVLVLQMLDLLSESGKILSQPGNSEAQLWTYVSLRLPQL 68 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P+ + T L ++N+N+E++ + G S ++ P+L A+ +S + Sbjct: 69 VARFLPYSALLATIITLATLNQNSEVVAMKAAGLSAHQVLAPLLLTALGVSATSLAFNEL 128 Query: 121 IEPKCRSTIKQLSAKAQLALT-FSYLEENLFFRLDDDLYIKISKYNPNN---TLQGIFIV 176 + + + +K A + S N++ R +D+ + + + L G+ Sbjct: 129 VVTRSSAALKAWQAVDYGVVPRGSAGRTNVYTRDGNDI-LTAASVSGEGSAMRLVGVTFY 187 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILN-----DGEVHRKSPISKDISIMKFKSYTLQTE 231 RD S + + L D ++ PI+ + + Sbjct: 188 -RRDVNGAIREKIVSPRANFAQPGWRLEQPVAFDVASVQQKPIAPLVVARAVTPVQVSIS 246 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 + ++ + ++++ L N EL + +L+ L + L+ + Sbjct: 247 TIDADGQNIVQLGRSIAAL----KANGRRTSELEGKW----WHKLSGPLSAALMPLLGAI 298 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 AA A Q + ++L ++ V + + P I FL + Sbjct: 299 AAFGLARSGQLLIRAVLGMALGFTYFVVDNAALAMGNFGGYPPLIAAWAPFLLFLLI 355 >gi|315636068|ref|ZP_07891325.1| conserved hypothetical protein [Arcobacter butzleri JV22] gi|315479637|gb|EFU70313.1| conserved hypothetical protein [Arcobacter butzleri JV22] Length = 355 Score = 69.6 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 60/361 (16%), Positives = 129/361 (35%), Gaps = 25/361 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YIL+ +F++ + + I LQ + + S N+ L Y Sbjct: 1 MSILSKYILKKYLINFIIVLISLELFFVGIDYLQNFKNIPA---SANLQLLYILYNSFFT 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P L +N E + + G +R + PV+ ++I S+ + + Sbjct: 58 LTLALPLSIVFGWIVTLVLFIKNNEFVAFNALGATRKNIFMPVVIVSI--SLLITLIFLQ 115 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSR 179 + P S + K FS + ++F + ++ Y+ K P + I I + Sbjct: 116 MTPLAYS--YEQKRKILNDEYFSNTKSDIFLKYNE-YYVYFQKLLPLEKKAENIHIYKVK 172 Query: 180 DTQTHKIYYAQSGSIDLDRQAI----ILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + + D+ + ++N E + D+ KF +TL+ Sbjct: 173 GDNLVETIIGEKAYFQNDKWYVVDVKVINKPENIDINNSKLDVRYEKFL-HTLEGFKPKI 231 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLF--PVIFGLISIVAA 293 V ++ + + R+ + +L F P++ + S + Sbjct: 232 LDNVYESKSDFSIMDAVSALILLKDQGMNTQKIRTILYNQLIIPFFVIPILILVYSFASL 291 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + R + IF +L + WGF +++ ++ + IP + + L ++F+ M Sbjct: 292 NSRFFNMAKFVSFSIFGTLIV-----WGFFFLVFRLTSSGTIIPEISMLL----TMFIWM 342 Query: 354 I 354 + Sbjct: 343 V 343 >gi|260433487|ref|ZP_05787458.1| permease, YjgP/YjgQ family [Silicibacter lacuscaerulensis ITI-1157] gi|260417315|gb|EEX10574.1| permease, YjgP/YjgQ family [Silicibacter lacuscaerulensis ITI-1157] Length = 366 Score = 69.6 bits (169), Expect = 7e-10, Method: Composition-based stats. Identities = 57/363 (15%), Positives = 123/363 (33%), Gaps = 29/363 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y R +SF++ + + +I +++++ + S LL+++ P + Sbjct: 2 ILDRYFARRFLQSFVVIGAIFLTLMILIDLIEQVRRFGDADLSFGQLLQLTLLNTPAAIS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + T + + R++EL++ G S I + + LA+ + N I Sbjct: 62 EMLPLLMILSTIALFVGLARSSELVVTRAIGRSGIRALAAPVALALGIGALAVALLNPIA 121 Query: 123 PKCRSTIKQLSAKAQL--ALTFSYLEENLFFRL---DDDLYIKISKYNPNNTLQ--GIFI 175 + LS + + + T S + L+ R D I + +TL+ + I Sbjct: 122 AATSEKYETLSDQYRNGGSSTLSLSRDGLWLRQGSKDGQSVIHAAGTENGDTLKLIDVTI 181 Query: 176 VDSRDTQTHKI-YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIM---KFKSYTLQTE 231 + AQS L DG+ + +S +F S T Sbjct: 182 ITFSPQGIPTRQIIAQSAE---------LLDGQWLLRGVKDWSLSRAANPEFFSSEYDTL 232 Query: 232 SANSSTIVLKANDQNLS------FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIF 285 + ++ + D+ + L + + Y +L + F V Sbjct: 233 ALPTTLTRERILDRLGHQGLVSIYDLPQLIRDLAQAGFSTKQYEVWLQAQLARPFFLVSM 292 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLF 344 LI AA VR + ++ + F +++ ++ E + + + F Sbjct: 293 VLIG--AAFTMRHVRFGGTGIAVLTAVLLGFAIYFVRNFAQILGENGQLPVMLAAWAPPF 350 Query: 345 CIS 347 Sbjct: 351 AAI 353 >gi|332086637|gb|EGI91777.1| hypothetical protein SB521682_3571 [Shigella boydii 5216-82] Length = 109 Score = 69.6 bits (169), Expect = 7e-10, Method: Composition-based stats. Identities = 27/105 (25%), Positives = 44/105 (41%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLF 105 L M+ P + L M +E+ I G R KP Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTYSEITAISAAGAVRDACTKPFFI 105 >gi|224534174|ref|ZP_03674754.1| conserved hypothetical integral membrane protein [Borrelia spielmanii A14S] gi|224514599|gb|EEF84913.1| conserved hypothetical integral membrane protein [Borrelia spielmanii A14S] Length = 429 Score = 69.6 bits (169), Expect = 8e-10, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 85/206 (41%), Gaps = 3/206 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 S+E YI+ + FL++ LF F+ ++ QIL + ++ + Y +P V+ Sbjct: 6 NSYESYIIAEFFKYFLITFLFFFFVFFINQILFFMRILLQNYVPFFKAFIFIIYSLPMVI 65 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF + + + E+L + G S L+ P L I++ FIS +I+ Sbjct: 66 ALSPPFASLISVILTIHKFKIHNEILAFRSIGISIFDLLVPFFKLGIIIVFISFISNDIL 125 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P ++ + + + L+ + DL + + N F ++R Sbjct: 126 LPLGSIGRLKIFNEIKEEVPHLVLKPYS-SKQYGDLIFVSGEKSENGYKNVTFFDNTRLK 184 Query: 182 QTHKIYYAQSGSIDLDRQAI--ILND 205 +I+ A++ I + + ILND Sbjct: 185 GFDRIFMAKNLDIRKENFQVYFILND 210 >gi|295917939|gb|ADG60246.1| permease YjgP/YjgQ [uncultured bacterium] Length = 122 Score = 69.2 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 15/101 (14%), Positives = 41/101 (40%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + + YILR + + + + ++L+ VS+ + ++ ++ L+P Sbjct: 19 ITAIDRYILRLVLVPMFGVFILAASLLMLEKMLRLFEFVSTQGGPVQVVFRMLVNLVPEY 78 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIK 101 + P + + ++EL ++ G S L++ Sbjct: 79 AGLAIPLGLMLGILLAFRKLATSSELDVMRAVGMSYSRLLR 119 >gi|258542690|ref|YP_003188123.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-01] gi|256633768|dbj|BAH99743.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-01] gi|256636827|dbj|BAI02796.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-03] gi|256639880|dbj|BAI05842.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-07] gi|256642936|dbj|BAI08891.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-22] gi|256645991|dbj|BAI11939.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-26] gi|256649044|dbj|BAI14985.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-32] gi|256652031|dbj|BAI17965.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655088|dbj|BAI21015.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-12] Length = 364 Score = 69.2 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 28/203 (13%), Positives = 74/203 (36%), Gaps = 9/203 (4%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ + + +V + ++ +L++ + + +L + P +L Sbjct: 14 RYLSMALLTRVIFCGAVLVGLLEILALLEQTTPILQRHLGIQGILSFAAMRAPFLLAGAL 73 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + +LT M +E+ I+ G S L K ++ +++ + ++ + P+ Sbjct: 74 PLSVLIGALLMLTQMTLASEIAILRACGLSTFGLYKYLIPATLVIGFAGVVLDDQVTPRS 133 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQ---GIFIVDSRDTQ 182 + + + F+ D + I + + I+I D+ + Sbjct: 134 EQALAAWWNRTDPHPENG----HAFWFHDGNRIAHIGYTSDGGNMLTKVDIYIRDAS-GR 188 Query: 183 THKIYYAQSGSIDLDRQAIILND 205 +I +A+S R +L++ Sbjct: 189 LQQILHAKSADYTHTR-GWLLHN 210 >gi|268678855|ref|YP_003303286.1| permease YjgP/YjgQ family protein [Sulfurospirillum deleyianum DSM 6946] gi|268616886|gb|ACZ11251.1| permease YjgP/YjgQ family protein [Sulfurospirillum deleyianum DSM 6946] Length = 353 Score = 69.2 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 35/198 (17%), Positives = 76/198 (38%), Gaps = 9/198 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK FE YI++ ++FL+ + + + +L + S N+ + + + + Sbjct: 1 MKLFETYIIKNYLKNFLVIFIGLDLFYVGVDLLTNYKNIPD---SANLQILYALFQAMSA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P +M + EL+ + + ++ L++P+ +A++LS+ Sbjct: 58 INYVLPLSIVFAMIVTYFAMLKTNELICMYASSITKKALVRPLFGVALVLSLLHIGLNY- 116 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSR 179 + + + + S E+LF + D Y+ K +P + I D Sbjct: 117 ---TEFAYAYEYGSNLKKYNRISNSSEDLFIK-HDQQYVYFKKLDPLKQVAYDVTIFDVE 172 Query: 180 DTQTHKIYYAQSGSIDLD 197 +I A+ S D Sbjct: 173 SADVKRIIRAKMASFVKD 190 >gi|213162832|ref|ZP_03348542.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 219 Score = 69.2 bits (168), Expect = 9e-10, Method: Composition-based stats. Identities = 30/211 (14%), Positives = 68/211 (32%), Gaps = 22/211 (10%) Query: 149 LFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT--HKIYYAQSGSI---DLDRQAIIL 203 F + + + + + +F+ R + A SG + Q + L Sbjct: 1 QFQQATNGSSVLFIESVDGSDFHDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTL 60 Query: 204 NDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPE 263 N G + + +D I F++Y + + ++ L N + + Sbjct: 61 NKGTRFEGTALLRDFRITDFQNYQAIIGHQAVALDPNDTDQMDMRTLWNTDND------- 113 Query: 264 LLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFS 323 R+E H R+T + L+ + RQ + +S+ + ++ F Sbjct: 114 ---RARAELHWRITLVFTVFMMALMVVP--LSVVNPRQGR-----VLSMLPAMLLYLLFF 163 Query: 324 YIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 I I+ N + + ++ L + Sbjct: 164 LIQTSIKSNGGKGKLDPVIWMWAVNLIYLAL 194 >gi|197105523|ref|YP_002130900.1| hypothetical protein PHZ_c2060 [Phenylobacterium zucineum HLK1] gi|196478943|gb|ACG78471.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1] Length = 351 Score = 69.2 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 46/354 (12%), Positives = 112/354 (31%), Gaps = 11/354 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 S LY+ R L + +V I ++ +L + + + +P ++ Sbjct: 2 SLGLYLFRLAFGRILAALAVLVGILQILDLLDVTTEILDRELGAQGVAYYALLRLPRLVE 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + + + + + +TG S + L A L++ + + Sbjct: 62 QAAPLAVLAGSLFAFAKLAGESAVTAMRSTGISAYRITLLALPAAALVAAAQLVIGMAVA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P+ + + + +A ++ + FR+ DD+ + + + I RD Sbjct: 122 PRTDAALTRW-WQATTPREEVKPQDVITFRVGDDI-VSARPSADAQRMSEVVIY-RRDGA 178 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + + + D+ A L S ++ +S T + L++ Sbjct: 179 GRLVQRTAADAAVYDQGAWRLIAPRFEAISE--GEVQTGAAESMTWTRSLRPADVRALQS 236 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 +S + Y ++ H+ W P ++ ++AA + Sbjct: 237 GGSTISAAEARRALHGGVSVRPKTYYDTQLHR---AWAAPAACLVMLLLAAPAALANFRG 293 Query: 303 KKIHPIF--ISLSISFGVFWGFSYIIHKIEQNPYYIPIL-YLFLFCISSIFLLM 353 + ++ + F VF G + + P + +F + L+ Sbjct: 294 GGTTLMVQCLAAGLLFLVFDGAFTALGESGAAPAMLAAWGAPVIFGALGVTALL 347 >gi|319404055|emb|CBI77643.1| conserved membrane hypothetical protein [Bartonella rochalimae ATCC BAA-1498] Length = 363 Score = 68.8 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 46/359 (12%), Positives = 124/359 (34%), Gaps = 21/359 (5%) Query: 3 SFELYILRCIGRS---FLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPT 59 + Y ++ FL+ +V + + ++ L+ + IS IP Sbjct: 5 TLGRYFFMLYLKTVCFFLLGVFILVLLIDFTENSSKLALLP--HYTAKGAFLISLLRIPL 62 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ + PF +L S+N+ EL++ + G S + P F A L +F + N Sbjct: 63 IMQQLFPFIALFSAITMLISLNKKLELVVARSIGISAWQFLAPACFGAFLFGLFSILFIN 122 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLF-----FRLDDDLYIKISK-YNPNNTLQGI 173 + S K++ A+ + + + + + +L Sbjct: 123 PLAAWSSSQAKKMIAEWRSNSAQISTTDTRIPWLTQHTNLGRITVGAKSIIYQDLSLIDA 182 Query: 174 -FIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 F+ + + + ++ A +L +G +++ + + ++ K++ + Sbjct: 183 TFVQYNENATVKNWINTKKATL--TDGAWLLTNGTIYKIGQTPEKFTELRIKTH---LKP 237 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + + L R + + H + + P++ ++++A Sbjct: 238 EFLTEYLTDPITIPFYTL---PKKIAVARSLGYSANKFDMHLQ-SLIALPMLLVAMTLIA 293 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 A + + + + + I+ + + S ++ Y PI+ ++ I ++F Sbjct: 294 ATVSLKIPRFGQSRTLILGGVIAGFILYVISMLVQSFGNAGYIPPIIAAWVPVIVALFF 352 >gi|111115642|ref|YP_710260.1| hypothetical protein BAPKO_0860 [Borrelia afzelii PKo] gi|110890916|gb|ABH02084.1| hypothetical protein BAPKO_0860 [Borrelia afzelii PKo] Length = 429 Score = 68.8 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 85/206 (41%), Gaps = 3/206 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 S+E YI+ + FL++ LF F+ ++ QIL + ++ + Y +P V+ Sbjct: 6 NSYESYIITEFFKYFLITFLFFFFVFFINQILFFMRILLQNYVPFFKAFIFIIYSLPMVI 65 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF + + + E+L + G S L+ P L I++ FIS +I+ Sbjct: 66 ALSPPFASLISVILTIHKFKIHNEILAFRSIGISIFDLLIPFFKLGIIIVFISFISNDIL 125 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P ++ + + + L+ + DL + + N F ++R Sbjct: 126 LPLGSIGRLKIFNEIKEEVPHLVLKPYS-SKQYGDLIFVSGEKSENGYKNVTFFDNTRLK 184 Query: 182 QTHKIYYAQSGSIDLDRQAI--ILND 205 +I+ A++ I + + ILND Sbjct: 185 GFDRIFMAKNLDIRKENFQVYFILND 210 >gi|237752465|ref|ZP_04582945.1| predicted protein [Helicobacter winghamensis ATCC BAA-430] gi|229375954|gb|EEO26045.1| predicted protein [Helicobacter winghamensis ATCC BAA-430] Length = 357 Score = 68.8 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 52/362 (14%), Positives = 121/362 (33%), Gaps = 21/362 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK F Y+ + F + + I +++ ++ + S S N+ + + Y Sbjct: 1 MKLFFRYVSFLYLKYFFYLFVSLECFFVAIDLVKFLDDLPS---SANLFILLLAYDFMYA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + +L ++ ++++ G ++I + P+ L+ +++ Sbjct: 58 SQFILPLSLILAQIVLLINLLKSSQFTAFLALGFAKIKIFYPIFLLSFCITLL--FIALN 115 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSR 179 P K+ + +LF + + + YI K P +G+ + + Sbjct: 116 ATPFAY--AKERVDLIIDQGFVGNYKSDLFVKYNQN-YIYFKKIYPLLQRAEGVIVYEIN 172 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSP----ISKDISIMKFKSYTLQTESANS 235 TQ +S + Q IL + + + I K +Y + Sbjct: 173 PTQNSLTRIVESKMAQFNGQDWILENVTITTLDDNLELGKNPLKIQKETTYKTLHDFKPK 232 Query: 236 STIVLKANDQNLSFL-LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + ++S L + + R + L FP+ LI I A Sbjct: 233 ILDNIYEKQGSISILDAFEAFMLLKEQNANTQKVRGALYNLL---FFPLFAPLIMICLAV 289 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP----ILYLFLFCISSIF 350 + + +++ + + WG + K+ + + P I+ +F ++S F Sbjct: 290 FIPNSNRYANFSLMTLAMILGVLITWGIFFSFSKLSISGFLQPEFSVIMPIFTLFLASSF 349 Query: 351 LL 352 Sbjct: 350 CF 351 >gi|83952307|ref|ZP_00961039.1| permease, YjgP/YjgQ family protein [Roseovarius nubinhibens ISM] gi|83837313|gb|EAP76610.1| permease, YjgP/YjgQ family protein [Roseovarius nubinhibens ISM] Length = 363 Score = 68.8 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 47/345 (13%), Positives = 107/345 (31%), Gaps = 15/345 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y R + + + +I ++ + +L+I +P Sbjct: 2 ILHFYFARKFLWTLIGIATVFSVLLGLIDLVDELQDFPD--LPFFDVLEIVLLNLPHANY 59 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + T + + R++EL+++ +G S + + + +A L+ + N + Sbjct: 60 EILPLVMILATVALFVRLARSSELVVLRASGRSALAGLAGPVAVAALVGLVGVTMFNPVV 119 Query: 123 PKCRSTIKQLS--AKAQLALTFSYLEENLFFR---LDDDLYIKISKYNPN-NTLQGI-FI 175 L + E L+ R + I P+ +TL G F Sbjct: 120 AASAKRYNDLVNGHSGLGDNVLAISSEGLWLRQGTEEGQTVIHAKSATPDLSTLFGATFT 179 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESAN 234 + + + A+S + + L+D ++ + + + S T++ Sbjct: 180 SFTPEGDPMRRLTAESAEL--GQGQWHLSDVKIWDLANTDNPEASARTQDRLTIRAALTR 237 Query: 235 SSTIV-LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 I + + L + Y F L Q LF + L+ AA Sbjct: 238 DRIIDSFGKPEYIPIWDLPAFIDQLETAGFSARRYAVWFQMELAQPLFLIALVLVG--AA 295 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 R + ++ + F + + ++ E I + Sbjct: 296 FTMKHARLANTGTSVLAAVMLGFTLHYIRNFAQVLGENGQIPILL 340 >gi|319407067|emb|CBI80704.1| conserved membrane hypothetical protein [Bartonella sp. 1-1C] Length = 363 Score = 68.4 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 43/357 (12%), Positives = 121/357 (33%), Gaps = 17/357 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVS-SSTESLNILLKISGYLIPTVL 61 + Y ++ L + + +I + + ++ + IS IP ++ Sbjct: 5 TLGRYFFMLYLKTVCFFLLGVFILVLLIDFTENSSKLAFLPHYTAKGAFLISLLRIPLIM 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF +L S+N+ EL++ + G S + P F A L +F + N + Sbjct: 65 QQLFPFIALFSAITMLISLNKKLELVVARSIGISAWQFLAPACFGAFLFGLFSILFINPL 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLF-----FRLDDDLYIKISK-YNPNNTLQGI-F 174 +++ A+ + + + + + + +L F Sbjct: 125 AAWSSFQAEKMIAEWRSNNAQTSITGTRIPWLTQHTNLGRITVGAKSIIYQDLSLIDATF 184 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + + + + ++ A +L +G +++ + + ++ K++ Sbjct: 185 VQYNENATVKNWINTKKATL--TDGAWLLTNGTIYKIGQTPEKFTELRIKTH------LK 236 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + D N R + + H + + P++ ++++AA Sbjct: 237 PEFLTEYLTDPITIPFYNLPKKIAVARSLGYSANKFDMHLQ-SLIALPMLLVAMTLIAAT 295 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + + + + + I+ + + S ++ Y PI+ ++ I ++F Sbjct: 296 VSLKIPRFGQSRTLILGGVIAGFILYVISMLVRSFGNAGYIPPIIAAWVPVIVALFF 352 >gi|283780133|ref|YP_003370888.1| permease [Pirellula staleyi DSM 6068] gi|283438586|gb|ADB17028.1| permease YjgP/YjgQ family protein [Pirellula staleyi DSM 6068] Length = 386 Score = 68.4 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 21/134 (15%), Positives = 49/134 (36%), Gaps = 5/134 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTES-----LNILLKISGY 55 M + + Y+L R L+ + + + VI L ++ S+ E L ++ + Sbjct: 1 MTTIDRYVLTIFIRVLLICFVSLAGLFVVIDCLGNLDEFSNYGEKHAGGILGVIFEYYSA 60 Query: 56 LIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLF 115 + + +T + R EL + G S ++ V A ++++ Sbjct: 61 HVLGFFDRTIGLLAMVAAIFTVTWLQRTQELTALAAAGISPARAMRSVFIAAGIVALLGA 120 Query: 116 ISENIIEPKCRSTI 129 + P+ R+ + Sbjct: 121 ANREFNLPQMRAKL 134 >gi|62289648|ref|YP_221441.1| hypothetical protein BruAb1_0705 [Brucella abortus bv. 1 str. 9-941] gi|82699576|ref|YP_414150.1| YjgP/YjgQ permease [Brucella melitensis biovar Abortus 2308] gi|189023898|ref|YP_001934666.1| permease [Brucella abortus S19] gi|254688958|ref|ZP_05152212.1| Predicted permease YjgP/YjgQ family protein [Brucella abortus bv. 6 str. 870] gi|254697092|ref|ZP_05158920.1| Predicted permease YjgP/YjgQ family protein [Brucella abortus bv. 2 str. 86/8/59] gi|254729988|ref|ZP_05188566.1| Predicted permease YjgP/YjgQ family protein [Brucella abortus bv. 4 str. 292] gi|256257206|ref|ZP_05462742.1| Predicted permease YjgP/YjgQ family protein [Brucella abortus bv. 9 str. C68] gi|260545600|ref|ZP_05821341.1| permease YjgP/YjgQ family protein [Brucella abortus NCTC 8038] gi|260754447|ref|ZP_05866795.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 6 str. 870] gi|260757666|ref|ZP_05870014.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 4 str. 292] gi|260761493|ref|ZP_05873836.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 2 str. 86/8/59] gi|260883476|ref|ZP_05895090.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 9 str. C68] gi|297248056|ref|ZP_06931774.1| YjgP/YjgQ family permease [Brucella abortus bv. 5 str. B3196] gi|62195780|gb|AAX74080.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941] gi|82615677|emb|CAJ10664.1| Predicted permease YjgP/YjgQ family [Brucella melitensis biovar Abortus 2308] gi|189019470|gb|ACD72192.1| Predicted permease YjgP/YjgQ family [Brucella abortus S19] gi|260097007|gb|EEW80882.1| permease YjgP/YjgQ family protein [Brucella abortus NCTC 8038] gi|260667984|gb|EEX54924.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 4 str. 292] gi|260671925|gb|EEX58746.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 2 str. 86/8/59] gi|260674555|gb|EEX61376.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 6 str. 870] gi|260873004|gb|EEX80073.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 9 str. C68] gi|297175225|gb|EFH34572.1| YjgP/YjgQ family permease [Brucella abortus bv. 5 str. B3196] Length = 362 Score = 68.1 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 37/206 (17%), Positives = 76/206 (36%), Gaps = 7/206 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + Y + L L I +A ++ + N +++ ++ L +S +P ++ Sbjct: 5 TLGRYFFTRYVQITLYFLLGIFALALLLDFTENANRLANLPAYTVWAALGLSAMRVPFIM 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF L S+NR EL++ + G S + P F A+L + N + Sbjct: 65 QQMIPFVALFSAMATLISLNRKYELVVARSVGVSAWQFLLPACFGALLFGLATIFILNPL 124 Query: 122 EPKCRSTIKQLSAKAQLAL---TFSYLEENLFFRLDDDLYIKISK--YNPNNTLQGI-FI 175 S ++++A + + + L + D+ I +K N TL FI Sbjct: 125 AAHGFSKAEEIAAMWKTGKVTDVSALRDPWLRQKTDEGETIIGAKSILNQGTTLADATFI 184 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAI 201 Y A++ ++ + Sbjct: 185 QFDEQKNIKDRYDARTATLQDGYWEL 210 >gi|148261610|ref|YP_001235737.1| permease YjgP/YjgQ family protein [Acidiphilium cryptum JF-5] gi|326405100|ref|YP_004285182.1| permease YjgP/YjgQ family protein [Acidiphilium multivorum AIU301] gi|146403291|gb|ABQ31818.1| permease YjgP/YjgQ family protein [Acidiphilium cryptum JF-5] gi|325051962|dbj|BAJ82300.1| permease YjgP/YjgQ family protein [Acidiphilium multivorum AIU301] Length = 376 Score = 67.7 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 43/353 (12%), Positives = 98/353 (27%), Gaps = 28/353 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTE-SLNILLKISGYLIPTVL 61 + LYI R + + + I + L + + + + +L + +P + Sbjct: 12 TLSLYIGRRFLGAVVAMQAGLTAIGALFDFLDLLRQSADKPQATFWRMLALEVLRVPWLG 71 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF + + R++EL++ TGTS + + A L+ + + + I Sbjct: 72 MQILPFAVLLGGIFAFWRLTRSSELVVARATGTSVWQFLAVPVAGAALIGVLATTAGSPI 131 Query: 122 EPKCRSTIKQLSAK-AQLALTFSYLEENL-FFRLDDD-------LYIKISKY-NPNNTLQ 171 + + L + + L+ + R DD + L Sbjct: 132 SAIMFARAEVLYSTYLGVDSGPLSLQGGQLWLRQADDAGGKGGIAILHADAVHLHGKVLT 191 Query: 172 GIFIVDSR---DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 I R T + A G ++ + E R + + Sbjct: 192 TGHITVLRLTAQTTLQERIEAARGQLEPGGWRL-----ESARILTPDGEPRAVSALRIPT 246 Query: 229 QTESANSSTIVLKANDQNLSFL---LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIF 285 + + L + + + ++S L L Sbjct: 247 TLTVGRVQESFASPSALSFWALPGFIRLLRRSGFSATQHELAFQS----LLALPLLC--A 300 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 ++ + A R+ I I + F +F + + + Sbjct: 301 TMVLVAAGFSMRPSRRGGAIQMIGAGVGCGFLLFMLSEVAAQLGKSGALPVGL 353 >gi|291279034|ref|YP_003495869.1| hypothetical protein DEFDS_0632 [Deferribacter desulfuricans SSM1] gi|290753736|dbj|BAI80113.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1] Length = 360 Score = 67.7 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 59/360 (16%), Positives = 119/360 (33%), Gaps = 5/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK F Y+++ S + +FI+ I Q++Q +S +L IP Sbjct: 1 MKKFNKYLIKSYLNSLVAILIFILIIYTFFQVVQHTKYISRYNTPFLNILIYDLMKIPYS 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + + + +N EL+ + G + L + L + L + Sbjct: 61 IYQVFPVATSAAIVVTMLKLIKNNELIAYLSFGGRLRQIAVLFLSVNFLFFLILLYYSDA 120 Query: 121 IEPKCRS-TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDS 178 I PK K K L F+ D + I I N G+ I + Sbjct: 121 INPKIEKIRAKYKDEKIFFQKHTEKLTVTDFYFKDKESIISIDLINFDKKEFDGVTIYEK 180 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + A+ L D ++ I + I + + Sbjct: 181 DKDTISIVKRAKKAKY-LGNNIWEFQDFKIFDVKKIPTLLKIYDKYKLKSKILTKFIKIK 239 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + + L + + E++R ++ ++ L ++ ++ + + Sbjct: 240 PDEPKKLSFKELSRVIKVYES-KGLSAESFRLIYYNKIAVPLILIVLTILLLPLTITISR 298 Query: 299 VRQRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 Q K+ +S++I F V + F + NP+ LF I + +L+ K++ Sbjct: 299 SYQYIKVAAKSLSVTIIFWVSYSVFYSLGKNGVINPFLANFSLHILFFIFGMIILLSKER 358 >gi|17987546|ref|NP_540180.1| putative permeases [Brucella melitensis bv. 1 str. 16M] gi|225852206|ref|YP_002732439.1| permease YjgP/YjgQ family protein [Brucella melitensis ATCC 23457] gi|254693440|ref|ZP_05155268.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 3 str. Tulya] gi|256044379|ref|ZP_05447283.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 1 str. Rev.1] gi|256113222|ref|ZP_05454090.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 3 str. Ether] gi|256264286|ref|ZP_05466818.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 2 str. 63/9] gi|260563731|ref|ZP_05834217.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 1 str. 16M] gi|261213693|ref|ZP_05927974.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 3 str. Tulya] gi|265990797|ref|ZP_06103354.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 1 str. Rev.1] gi|265994633|ref|ZP_06107190.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 3 str. Ether] gi|17983249|gb|AAL52444.1| putative permeases [Brucella melitensis bv. 1 str. 16M] gi|225640571|gb|ACO00485.1| permease YjgP/YjgQ family protein [Brucella melitensis ATCC 23457] gi|260153747|gb|EEW88839.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 1 str. 16M] gi|260915300|gb|EEX82161.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 3 str. Tulya] gi|262765746|gb|EEZ11535.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 3 str. Ether] gi|263001581|gb|EEZ14156.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 1 str. Rev.1] gi|263094546|gb|EEZ18355.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 2 str. 63/9] gi|326408705|gb|ADZ65770.1| permease YjgP/YjgQ family protein [Brucella melitensis M28] gi|326538429|gb|ADZ86644.1| permease YjgP/YjgQ family protein [Brucella melitensis M5-90] Length = 362 Score = 67.7 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 37/206 (17%), Positives = 76/206 (36%), Gaps = 7/206 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + Y + L L I +A ++ + N +++ ++ L +S +P ++ Sbjct: 5 TLGRYFFTRYVQITLYFLLGIFALALLLDFTENANRLANLPAYTVWAALGLSAMRVPFIM 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF L S+NR EL++ + G S + P F A+L + N + Sbjct: 65 QQMIPFVALFSAMATLISLNRKYELVVARSVGVSAWQFLLPACFGALLFGLATIFILNPL 124 Query: 122 EPKCRSTIKQLSAKAQLAL---TFSYLEENLFFRLDDDLYIKISK--YNPNNTLQGI-FI 175 S ++++A + + + L + D+ I +K N TL FI Sbjct: 125 AAHGFSKAEEIAAMWKTGKVTDVSALRDPWLRQKTDEGETIIGAKSILNQGTTLADATFI 184 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAI 201 Y A++ ++ + Sbjct: 185 QFDEQKNIKDRYDARTATLQDGYWEL 210 >gi|225627183|ref|ZP_03785221.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] gi|225618018|gb|EEH15062.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] Length = 397 Score = 67.3 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 76/206 (36%), Gaps = 7/206 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + Y + L L I +A ++ + + +++ ++ L +S +P ++ Sbjct: 40 TLGRYFFTRYVQITLYFLLGIFALALLLDFTENASRLANLPAYTVWAALGLSAMRVPFIM 99 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF L S+NR EL++ + G S + P F A+L + N + Sbjct: 100 QQMIPFVALFSAMATLISLNRKYELVVARSVGVSAWQFLLPACFGALLFGLATIFILNPL 159 Query: 122 EPKCRSTIKQLSAKAQLAL---TFSYLEENLFFRLDDDLYIKISK--YNPNNTLQGI-FI 175 S ++++A + + + L + D+ I +K N TL FI Sbjct: 160 AAHGFSKAEEIAAMWKTGKVTDVSALRDPWLRQKTDEGETIIGAKSILNQGTTLADATFI 219 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAI 201 Y A++ ++ + Sbjct: 220 QFDEQKNIKDRYDARTATLQDGYWEL 245 >gi|90403464|dbj|BAE91930.1| hypothetical transmembrane protein [Brevundimonas diminuta] Length = 81 Score = 67.3 bits (163), Expect = 4e-09, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 38/81 (46%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+ R IG + + + I + Q L ++ ++ +S+ +++K++ +P + Sbjct: 1 MTLIQRYLFRQIGLPIVAAVAALAGIGLLSQSLDQLEVIVERGQSVWVMVKLTLLALPQL 60 Query: 61 LPMVTPFCFAMETTNVLTSMN 81 + ++ P + LT + Sbjct: 61 IAVILPIGLFVGALIALTRLQ 81 >gi|85706341|ref|ZP_01037435.1| permease, YjgP/YjgQ family protein [Roseovarius sp. 217] gi|85669114|gb|EAQ23981.1| permease, YjgP/YjgQ family protein [Roseovarius sp. 217] Length = 363 Score = 67.3 bits (163), Expect = 4e-09, Method: Composition-based stats. Identities = 51/365 (13%), Positives = 121/365 (33%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 E Y R SFL + +V + +I ++ + + +L I +P Sbjct: 2 ILERYFGRRFFMSFLGVTVTLVVMLGLIDLMDELGDFPE--LAFGQVLGIVLLKLPEAYY 59 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + + + + R +EL+++ +G S + + +A+ + + N + Sbjct: 60 EIIPLVMILASVALFLRLARTSELVVLRASGRSALQGLLAPAAVALAIGLLGLAVGNPLV 119 Query: 123 PKCRSTIKQLSAKA--QLALTFSYLEENLFFR---LDDDLYIKISKYNPN-NTLQGIFIV 176 L Q + + E L+ R + I ++ + + TL Sbjct: 120 AATSKRHHDLVNSYSGQASSDLAIASEGLWLRQSAAEGQTVIYAARASSDLGTLYAPSFY 179 Query: 177 D-SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI-SKDISIMKFKSYTLQTESAN 234 D + D + + A S ++ A +L + ++ + + + S + T+ ++ Sbjct: 180 DFAPDGKPLRRISATSAQLEEG--AWVLTEAKIWDLAQGVNPEASAREDAQMTVPSDLTQ 237 Query: 235 SSTIV-LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + + + + L Y F L Q +F + L+ I AA Sbjct: 238 DRILDSFGSPEYVPIWELPKFIAQLEEAGFSARRYAIWFQSELAQPVF--LVALVLISAA 295 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN------PYYIPILYLFLFCIS 347 R + ++ + FG+ + ++ E + P + + Sbjct: 296 FTMQHTRGANVGLSVLTAVLLGFGLHYIRNFAQILGENGQIPILLAAWAPPVASLFIGLG 355 Query: 348 SIFLL 352 + L Sbjct: 356 ILLHL 360 >gi|224532217|ref|ZP_03672849.1| conserved hypothetical integral membrane protein [Borrelia valaisiana VS116] gi|224511682|gb|EEF82088.1| conserved hypothetical integral membrane protein [Borrelia valaisiana VS116] Length = 390 Score = 66.9 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 62/165 (37%), Gaps = 5/165 (3%) Query: 44 ESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPV 103 Y +P V+ + PF + + + E+L + G S L+ P Sbjct: 9 VPFFKAFVFIVYSLPMVIALSPPFASLISVILTIHKFKIHNEILAFRSIGISIFDLLVPF 68 Query: 104 LFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISK 163 L ++++ FIS +I+ P ++ + + + L+ + DL + Sbjct: 69 FKLGVVIAFISFISNDILLPLGSIGRLKIFNEIKEEIPHLVLKPYS-SKQYGDLIFVSGE 127 Query: 164 YNPNNTLQGIFIVDSRD-TQTHKIYYAQSGSIDLDRQAI--ILND 205 + N + + DS +I+ A++ I + + ILND Sbjct: 128 KSENG-YKNVTFFDSTGLKGFDRIFMAKNLDIRKENFQVYFILND 171 >gi|254718822|ref|ZP_05180633.1| hypothetical protein Bru83_04670 [Brucella sp. 83/13] gi|265983807|ref|ZP_06096542.1| permease YjgP/YjgQ family protein [Brucella sp. 83/13] gi|306838744|ref|ZP_07471578.1| permease YjgP/YjgQ family protein [Brucella sp. NF 2653] gi|264662399|gb|EEZ32660.1| permease YjgP/YjgQ family protein [Brucella sp. 83/13] gi|306406146|gb|EFM62391.1| permease YjgP/YjgQ family protein [Brucella sp. NF 2653] Length = 362 Score = 66.5 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 77/206 (37%), Gaps = 7/206 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + Y + L L I +A ++ + + +++ ++ L +S +P ++ Sbjct: 5 TLGRYFFTRYVQITLYFLLGIFALALLLDFTENASRLANLPAYTVWAALGLSAMRVPFIM 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF L S+NR EL++ + G S + P F A+L + N + Sbjct: 65 QQMIPFVALFSAMATLISLNRKYELVVARSVGVSAWQFLLPACFGALLFGLATIFILNPL 124 Query: 122 EPKCRSTIKQLSAKAQLAL---TFSYLEENLFFRLDDDLYIKISK--YNPNNTLQGI-FI 175 S ++++A + + + L + D+ I +K N TL FI Sbjct: 125 AAHGFSKAEEIAAMWKTGKVTDVSALRDPWLRQKTDEGETIIGAKSILNQGTTLADATFI 184 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAI 201 + Y A++ ++ + Sbjct: 185 QFDKQKNIKDRYDARTATLQDGYWEL 210 >gi|319760186|ref|YP_004124124.1| putative permease [Candidatus Blochmannia vafer str. BVAF] gi|318038900|gb|ADV33450.1| putative permease [Candidatus Blochmannia vafer str. BVAF] Length = 363 Score = 66.5 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 53/357 (14%), Positives = 127/357 (35%), Gaps = 11/357 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K ++YI + I S + L ++ ++ +I+++ + T S+ + + +P Sbjct: 3 KILDMYIKKSILSSISIVFLILISLSSIIRLIDGLRNFEKKTYSIIEIFFCTFLSLPKDF 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L + EL+I+ G S + V+ +++ + I + + Sbjct: 63 ELFLPISILLGGLLGLGVLEIRNELVIMKVFGLSYFQITFSVVKVSVFILILHIMLNEWL 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI-FIVDSRD 180 P + + + F + + +D++ ++ I N + G+ ++D Sbjct: 123 LPGSQYMLYIYQGHKEYNSYFFPEKNKNLWIIDNNGFVCIEYMPTTNNVFGVNLYYLTKD 182 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--STI 238 + KI Y + + ++ ++ S + ++ F Y T S I Sbjct: 183 KKIEKIIYFKDATYI--NKSWFVSSAIELNFSDKTHIVNRTVF-HYKWNTILTPDLLSII 239 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 ++S L + N + + Y F ++ L +I +IS++ + Sbjct: 240 TTNPRVLSVSKLFS-CIKYFNGINQNSQYYELIFWNKILSPLTGMIMLIISLLYSFGPFS 298 Query: 299 VRQRKKIHPIFISLSISFGV----FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 ++ + F V F F + + IP+L + I +F Sbjct: 299 KKKIGFRLFFGSIIGFLFYVLHQFFDVFCVMHNIYPLVGSIIPVLLFIVINIVIVFY 355 >gi|15807417|ref|NP_296150.1| hypothetical protein DR_2430 [Deinococcus radiodurans R1] gi|6460254|gb|AAF11980.1|AE002073_10 hypothetical protein DR_2430 [Deinococcus radiodurans R1] Length = 350 Score = 66.5 bits (161), Expect = 7e-09, Method: Composition-based stats. Identities = 48/368 (13%), Positives = 104/368 (28%), Gaps = 33/368 (8%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 ILR + + + ++ + + + + + + + ++PT+ Sbjct: 4 SILPRSILREVLKMYGAGLALLLALQFADTLSSTLGKAIAYRATASESATAFLAILPTIF 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 L+ + R++EL G ++L+ P+L L+ F + + Sbjct: 64 NRALVLSVPFAILLGLSRLQRDSELKAAFAAGIRPLSLVWPLLLPFTLVGALAFWNAGTV 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN--PNNT---LQGIFIV 176 P + + + + + P L G+ + Sbjct: 124 VPAGLDRWDKTWYSI-FNVPEKIPTRDNYTYAPPGALYYAGRVTQAPQGQPAPLAGVMVQ 182 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILN------DGEVHRKSPISKDISIMKFKSYTLQT 230 + +Y A SGS + Q+ L+ GE R+ + T Sbjct: 183 -----RGGVVYTANSGSWNTAAQSWTLDAPWVTAPGERPRQQAGPVTLPQG-------DT 230 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 + +N + L + + Y + R P+ F L Sbjct: 231 LRPPPAEAKKVSNAALRTAL-----AGESLTEQERREYTYQLASRYADPFTPIAFAL--- 282 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFS-YIIHKIEQNPYYIPILYLFLFCISSI 349 AA L+R + I F V W + +P + +F + + Sbjct: 283 AAAVLGLLIRNQAAALAAVIVFIAGFYVLWITMPQLARAGAVDPTLAAWVPSLIFLLLGL 342 Query: 350 FLLMIKKK 357 L + Sbjct: 343 GLAWRVNR 350 >gi|254713811|ref|ZP_05175622.1| hypothetical protein BcetM6_10740 [Brucella ceti M644/93/1] gi|254717131|ref|ZP_05178942.1| hypothetical protein BcetM_12059 [Brucella ceti M13/05/1] gi|261218946|ref|ZP_05933227.1| permease YjgP/YjgQ family protein [Brucella ceti M13/05/1] gi|261321555|ref|ZP_05960752.1| permease YjgP/YjgQ family protein [Brucella ceti M644/93/1] gi|260924035|gb|EEX90603.1| permease YjgP/YjgQ family protein [Brucella ceti M13/05/1] gi|261294245|gb|EEX97741.1| permease YjgP/YjgQ family protein [Brucella ceti M644/93/1] Length = 362 Score = 66.1 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 76/206 (36%), Gaps = 7/206 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + Y + L L I +A ++ + + +++ ++ L +S +P ++ Sbjct: 5 TLGRYFFTRYVQITLYFLLGIFALALLLDFTENASRLANLPAYTVWAALGLSAMRVPFIM 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF L S+NR EL++ + G S + P F A+L + N + Sbjct: 65 QQMIPFVALFSAMATLISLNRKYELVVARSVGVSAWQFLLPACFGALLFGLATIFILNPL 124 Query: 122 EPKCRSTIKQLSAKAQLAL---TFSYLEENLFFRLDDDLYIKISK--YNPNNTLQGI-FI 175 S ++++A + + + L + D+ I +K N TL FI Sbjct: 125 AAHGFSKAEEIAAMWKTGKVTDVSALRDPWLRQKTDEGETIIGAKSILNQGTTLADATFI 184 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAI 201 Y A++ ++ + Sbjct: 185 QFDEQKNIKDRYDARTATLQDGYWEL 210 >gi|224533436|ref|ZP_03674029.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi CA-11.2a] gi|224513398|gb|EEF83756.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi CA-11.2a] Length = 390 Score = 66.1 bits (160), Expect = 8e-09, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 62/165 (37%), Gaps = 5/165 (3%) Query: 44 ESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPV 103 Y +P V+ + PF + + + E+L + G S L+ P Sbjct: 9 VPFFKAFIFIIYSLPMVIALSPPFASLISVILTIHKFKLHNEILAFRSIGISIFDLLVPF 68 Query: 104 LFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISK 163 L I+++ FIS +I+ P ++ + + + L+ + DL + Sbjct: 69 FKLGIVIAFVSFISNDILLPLGSIGRLKIFNEIKEEVPHLVLKPYS-SKQYGDLIFVSGE 127 Query: 164 YNPNNTLQGIFIVDSRD-TQTHKIYYAQSGSIDLDRQAI--ILND 205 + N + + D+ +I+ A++ I + + ILND Sbjct: 128 KSENG-YKNVTFFDNTGLKGFDRIFMAKNLDIRKENFQVYFILND 171 >gi|23501573|ref|NP_697700.1| hypothetical protein BR0686 [Brucella suis 1330] gi|161618655|ref|YP_001592542.1| permease YjgP/YjgQ family protein [Brucella canis ATCC 23365] gi|163842956|ref|YP_001627360.1| permease YjgP/YjgQ family protein [Brucella suis ATCC 23445] gi|254701469|ref|ZP_05163297.1| hypothetical protein Bsuib55_11506 [Brucella suis bv. 5 str. 513] gi|254704016|ref|ZP_05165844.1| hypothetical protein Bsuib36_08824 [Brucella suis bv. 3 str. 686] gi|254707610|ref|ZP_05169438.1| hypothetical protein BpinM_11731 [Brucella pinnipedialis M163/99/10] gi|254709807|ref|ZP_05171618.1| hypothetical protein BpinB_05956 [Brucella pinnipedialis B2/94] gi|256031298|ref|ZP_05444912.1| hypothetical protein BpinM2_11713 [Brucella pinnipedialis M292/94/1] gi|256060811|ref|ZP_05450971.1| hypothetical protein Bneo5_10662 [Brucella neotomae 5K33] gi|256159412|ref|ZP_05457190.1| hypothetical protein BcetM4_10688 [Brucella ceti M490/95/1] gi|256254706|ref|ZP_05460242.1| hypothetical protein BcetB_10505 [Brucella ceti B1/94] gi|256369121|ref|YP_003106629.1| permease YjgP/YjgQ family protein [Brucella microti CCM 4915] gi|260168437|ref|ZP_05755248.1| hypothetical protein BruF5_08723 [Brucella sp. F5/99] gi|260566735|ref|ZP_05837205.1| permease YjgP/YjgQ family protein [Brucella suis bv. 4 str. 40] gi|261221886|ref|ZP_05936167.1| permease YjgP/YjgQ family protein [Brucella ceti B1/94] gi|261315100|ref|ZP_05954297.1| permease YjgP/YjgQ family protein [Brucella pinnipedialis M163/99/10] gi|261317345|ref|ZP_05956542.1| permease YjgP/YjgQ family protein [Brucella pinnipedialis B2/94] gi|261324803|ref|ZP_05964000.1| permease YjgP/YjgQ family protein [Brucella neotomae 5K33] gi|261752012|ref|ZP_05995721.1| permease YjgP/YjgQ family protein [Brucella suis bv. 5 str. 513] gi|261754671|ref|ZP_05998380.1| permease YjgP/YjgQ family protein [Brucella suis bv. 3 str. 686] gi|261757899|ref|ZP_06001608.1| permease YjgP/YjgQ family protein [Brucella sp. F5/99] gi|265988383|ref|ZP_06100940.1| permease YjgP/YjgQ family protein [Brucella pinnipedialis M292/94/1] gi|265997849|ref|ZP_06110406.1| permease YjgP/YjgQ family protein [Brucella ceti M490/95/1] gi|294852048|ref|ZP_06792721.1| hypothetical protein BAZG_00964 [Brucella sp. NVSL 07-0026] gi|306845287|ref|ZP_07477863.1| hypothetical protein BIBO1_1972 [Brucella sp. BO1] gi|23347486|gb|AAN29615.1| conserved hypothetical protein [Brucella suis 1330] gi|161335466|gb|ABX61771.1| permease YjgP/YjgQ family protein [Brucella canis ATCC 23365] gi|163673679|gb|ABY37790.1| permease YjgP/YjgQ family protein [Brucella suis ATCC 23445] gi|255999281|gb|ACU47680.1| permease YjgP/YjgQ family protein [Brucella microti CCM 4915] gi|260156253|gb|EEW91333.1| permease YjgP/YjgQ family protein [Brucella suis bv. 4 str. 40] gi|260920470|gb|EEX87123.1| permease YjgP/YjgQ family protein [Brucella ceti B1/94] gi|261296568|gb|EEY00065.1| permease YjgP/YjgQ family protein [Brucella pinnipedialis B2/94] gi|261300783|gb|EEY04280.1| permease YjgP/YjgQ family protein [Brucella neotomae 5K33] gi|261304126|gb|EEY07623.1| permease YjgP/YjgQ family protein [Brucella pinnipedialis M163/99/10] gi|261737883|gb|EEY25879.1| permease YjgP/YjgQ family protein [Brucella sp. F5/99] gi|261741765|gb|EEY29691.1| permease YjgP/YjgQ family protein [Brucella suis bv. 5 str. 513] gi|261744424|gb|EEY32350.1| permease YjgP/YjgQ family protein [Brucella suis bv. 3 str. 686] gi|262552317|gb|EEZ08307.1| permease YjgP/YjgQ family protein [Brucella ceti M490/95/1] gi|264660580|gb|EEZ30841.1| permease YjgP/YjgQ family protein [Brucella pinnipedialis M292/94/1] gi|294820637|gb|EFG37636.1| hypothetical protein BAZG_00964 [Brucella sp. NVSL 07-0026] gi|306274446|gb|EFM56253.1| hypothetical protein BIBO1_1972 [Brucella sp. BO1] Length = 362 Score = 66.1 bits (160), Expect = 8e-09, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 76/206 (36%), Gaps = 7/206 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + Y + L L I +A ++ + + +++ ++ L +S +P ++ Sbjct: 5 TLGRYFFTRYVQITLYFLLGIFALALLLDFTENASRLANLPAYTVWAALGLSAMRVPFIM 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF L S+NR EL++ + G S + P F A+L + N + Sbjct: 65 QQMIPFVALFSAMATLISLNRKYELVVARSVGVSAWQFLLPACFGALLFGLATIFILNPL 124 Query: 122 EPKCRSTIKQLSAKAQLAL---TFSYLEENLFFRLDDDLYIKISK--YNPNNTLQGI-FI 175 S ++++A + + + L + D+ I +K N TL FI Sbjct: 125 AAHGFSKAEEIAAMWKTGKVTDVSALRDPWLRQKTDEGETIIGAKSILNQGTTLADATFI 184 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAI 201 Y A++ ++ + Sbjct: 185 QFDEQKNIKDRYDARTATLQDGYWEL 210 >gi|328676744|gb|AEB27614.1| Permease YjgP/YjgQ family protein [Francisella cf. novicida Fx1] Length = 276 Score = 66.1 bits (160), Expect = 8e-09, Method: Composition-based stats. Identities = 46/274 (16%), Positives = 97/274 (35%), Gaps = 10/274 (3%) Query: 86 LLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYL 145 + + G + + ++K L + L+I I+ + P + T+ A S + Sbjct: 1 MFVTLAGGITWMQIVKNTLKPVVALTIITLITVMYLNPLSKQTLDIYKASLSAKALLSSI 60 Query: 146 EENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR-DTQTHKIYYAQSGSIDLDRQA--II 202 + + D I I + NTL +F+ + +K+ A + I D+ A I Sbjct: 61 TDQKIIKAPDGKIIYIGNKS-GNTLSDVFLYQNTPQDGEYKVMTAPTAKIVSDKTAAYID 119 Query: 203 LNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRP 262 + ++ K+ + + S K + D+ L N N+ Sbjct: 120 FMNVNIYTKNSQNSEYSYDNAKKAIYTIFDNSDRDYNHDRVDRLYMHTLIENFND----K 175 Query: 263 ELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGF 322 Y++EF R+ + ++ L+++ R + K+ P + L+I F Sbjct: 176 TNGTAYKAEFFGRINNAISVIVSSLLALALCRLRPRQNKYAKLLPSVVVLAIYLCTNM-F 234 Query: 323 SYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + P +I +L + + I+K Sbjct: 235 INTLMANGSVPVWIGF-WLPHIFFTIFAVRTIRK 267 >gi|260466947|ref|ZP_05813129.1| permease YjgP/YjgQ family protein [Mesorhizobium opportunistum WSM2075] gi|259029244|gb|EEW30538.1| permease YjgP/YjgQ family protein [Mesorhizobium opportunistum WSM2075] Length = 360 Score = 66.1 bits (160), Expect = 8e-09, Method: Composition-based stats. Identities = 49/340 (14%), Positives = 99/340 (29%), Gaps = 46/340 (13%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + Y + L ++ + ++I + + + + ISG +P ++ Sbjct: 4 TLGRYFFFRYVAITIWFFLGLLALVFLIDFTELSGRTTGLPGFTYGTAMAISGLRMPMIM 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PF L S+NR EL+I + G S + P A+L + N + Sbjct: 64 LQTVPFVGLFSAMATLVSLNRRYELVIARSAGVSAWQFLLPCCIGALLFGVVSVGIINPL 123 Query: 122 EPKCRSTIKQLSAKAQLAL-------TFSYLEENLFFRLDDDLYIKISKYNPNN-TLQG- 172 S +Q+ + + ++ + D I + Sbjct: 124 AAHAFSLSEQIETQLRSGKSNTVSADAAPWIRQKT---SSGDTIIGARAILNQGLEMSDA 180 Query: 173 -IFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 FI+D + A+ D L DG + + F++ +Q+ Sbjct: 181 VFFILDQQGN------IAER----KDAVRAYLRDGYWELQDVKT-------FRNGVIQSA 223 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYR-----------PELLETYRSEFHKRLTQWL 280 + + LK + + L P Y + +F + Sbjct: 224 ANDRVPTNLKP--EFVQERLARPETIPFYDLPGKIEVARSFGLKANAFAMQFDSLVALPF 281 Query: 281 FPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFW 320 V LI+ A R + I + F ++ Sbjct: 282 LLVAMTLIA--ATVSMRFARMGQSATMILGGVVAGFLLYV 319 >gi|148560142|ref|YP_001258668.1| hypothetical protein BOV_0678 [Brucella ovis ATCC 25840] gi|148371399|gb|ABQ61378.1| conserved hypothetical protein [Brucella ovis ATCC 25840] Length = 362 Score = 66.1 bits (160), Expect = 9e-09, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 76/206 (36%), Gaps = 7/206 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + Y + L L I +A ++ + + +++ ++ L +S +P ++ Sbjct: 5 TLGRYFFTRYVQITLYFLLGIFALALLLDFTENASRLANLPAYTVWAALGLSAMRVPFIM 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF L S+NR EL++ + G S + P F A+L + N + Sbjct: 65 QQMIPFVALFSAMATLISLNRKYELVVARSVGVSAWQFLLPACFGALLFGLATIFILNPL 124 Query: 122 EPKCRSTIKQLSAKAQLAL---TFSYLEENLFFRLDDDLYIKISK--YNPNNTLQGI-FI 175 S ++++A + + + L + D+ I +K N TL FI Sbjct: 125 AAHGFSKAEEIAAMWKTGKVTDVSALRDPWLRQKTDEGETIIGAKSILNQGTTLADATFI 184 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAI 201 Y A++ ++ + Sbjct: 185 QFDEQKNIKDRYDARTATLQDGYWEL 210 >gi|114569776|ref|YP_756456.1| permease YjgP/YjgQ family protein [Maricaulis maris MCS10] gi|114340238|gb|ABI65518.1| permease YjgP/YjgQ family protein [Maricaulis maris MCS10] Length = 365 Score = 65.8 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 74/206 (35%), Gaps = 10/206 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSST-ESLNILLKISGYLIPTV 60 Y+ L++ L I + ++ +++ V + S LL ++ P + Sbjct: 4 GRLNRYMASQTAGGLLLAFLTIATVIILVDFVEQSRAVGTRVDVSTLDLLGLTLLRAPAL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L PF F T L +NR++EL+++ +G S ++ + LA+ + I N Sbjct: 64 LESTLPFVFLFGTLTSLFRLNRSSELIVMRASGISAWRILTAPMVLAVGIGIIGATGLNP 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFR--LDDDLYIKISKY--NPNNTLQG-IFI 175 + + + E+ ++ R D + + L+ +F+ Sbjct: 124 LAATLNAEFEARRDSLMNVRRVEGAEQPVWLRETNIDGFTVIAATQLEEARQVLRNPVFL 183 Query: 176 VDSRD----TQTHKIYYAQSGSIDLD 197 + D + + A+S + Sbjct: 184 QFAEDASGTPRLERRIDAESAELRAG 209 >gi|296272453|ref|YP_003655084.1| permease YjgP/YjgQ family protein [Arcobacter nitrofigilis DSM 7299] gi|296096627|gb|ADG92577.1| permease YjgP/YjgQ family protein [Arcobacter nitrofigilis DSM 7299] Length = 356 Score = 65.8 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 63/367 (17%), Positives = 133/367 (36%), Gaps = 25/367 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ Y+LR R+F++ + + I LQ + V + S N+ L Y Sbjct: 1 MRIITKYLLRKFIRNFVIVLISLQIFFVGIDFLQNFDEVPN---SANLQLLYILYNSFFT 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + M + E++ + G + PV+ ++I+ + + + Sbjct: 58 LTLTLPLSLVFGWIITIVIMVKTNEMVASFSLGVGNRQIFMPVVNVSII--LIVLLIGFQ 115 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTL-QGIFIVDSR 179 + P S + K F+ + ++F + +D ++ K P + I I Sbjct: 116 MTPLAYS--YEYKEKILKNTYFTSSKSDIFVK-YNDYFVYFKKLYPLQKYAEDIHIYKVV 172 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI-SKDISIMKFKS----YTLQTESAN 234 D + A+ +R ++ D + +K + + S ++ YTL+ Sbjct: 173 DDDIEEGIVAKKAYFQNNRWYVL--DARITKKPKVIDWNNSKIEIHHEKFLYTLEGFKPK 230 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 V ++ N + R+ + + L+ LI ++ + Sbjct: 231 ILDSVYESTSSFSILDAITALTLLNDQEVNTSKIRASLYYEIVAPLY--FVPLIILIFSY 288 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ----NPYYIPILYLFLFCISSIF 350 R S++ + + WG +++HK NP +L +FL+ I I Sbjct: 289 TSFNSRFFNIGKFTSFSIAATLVI-WGVFFMLHKFSSGGVINPEISILLPIFLWYI--IT 345 Query: 351 LLMIKKK 357 ++IKK+ Sbjct: 346 YILIKKQ 352 >gi|255321867|ref|ZP_05363017.1| tRNA-I [Campylobacter showae RM3277] gi|255300971|gb|EET80238.1| tRNA-I [Campylobacter showae RM3277] Length = 353 Score = 65.4 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 70/206 (33%), Gaps = 17/206 (8%) Query: 1 MKSFELYI----LRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYL 56 M + Y+ + F+ LF V I + + S N+ L G Sbjct: 1 MNLYARYVGWLYFKYFVILFIALTLFYVGIDILTN-------LKDMPASANLKLLYFGLT 53 Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 T + V P SM R+ EL+ G + LIKP ++A+ +++ Sbjct: 54 SLTAVNYVLPLALIFALITSKFSMIRSNELVSFYALGIDKNRLIKPPFYIALAITLIYVG 113 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFI 175 + + + L+ T S + F + + ++ + NP + + + I Sbjct: 114 LNFTPFAYAYEYGRNIVKLSNLSRTSSDI----FLK-FEGKFVYMDSLNPISGEAKDVRI 168 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAI 201 D + + +SG D + Sbjct: 169 FDIDSSNLRSATFGESGKFIDDAWLL 194 >gi|114328862|ref|YP_746019.1| hypothetical protein GbCGDNIH1_2198 [Granulibacter bethesdensis CGDNIH1] gi|114317036|gb|ABI63096.1| hypothetical membrane spanning protein [Granulibacter bethesdensis CGDNIH1] Length = 370 Score = 65.0 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 48/363 (13%), Positives = 107/363 (29%), Gaps = 26/363 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTVL 61 + YI R + L+ + + + + ++ + ++ S ++ I+ +P + Sbjct: 6 TLSSYITRVFLAAALVVLVALTLLVGLFDFIELLRRAATKPDVSFGLVSTIAALRLPWMS 65 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF + + R++EL++ G S + + A LL + + + Sbjct: 66 ITILPFAVLLGGIGAFWRLTRSSELVVARAAGISAWQFLALPVGAAALLGMLAMTVISPL 125 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENL---FFRLDDDL------YIKISKYNP-NNTLQ 171 S +QL + D L I + N+LQ Sbjct: 126 SSVMLSRAEQLDNTYLRTSGGPMRLAGGQLWLRQSDPGLDPHGVSIIHAMQVAAHKNSLQ 185 Query: 172 ----GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 +F +DS D + A + + + +L++ V R S + ++ Sbjct: 186 ASSITVFRLDSEDRLVQR-IEAATARLVSGQ--WVLDNARVLRPSHLPDPPHTVE---IP 239 Query: 228 LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLE-TYRSEFHKRLTQWLFPVIFG 286 + + L P+ R +R F L L Sbjct: 240 TDLTVRRIQESFASPDTLSFWSL--PDFIRLLDRSGFSSLRHRLRFQSLLALPLLCATMA 297 Query: 287 LISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCI 346 L++ A R+ I ++ F +F + + + Sbjct: 298 LVA--AGFSMRPSRRGGVAKMIGSGVAAGFCLFVVSKVAEEFGQSGTVPVVLAAWAPSVA 355 Query: 347 SSI 349 + Sbjct: 356 GLM 358 >gi|217978371|ref|YP_002362518.1| permease YjgP/YjgQ family protein [Methylocella silvestris BL2] gi|217503747|gb|ACK51156.1| permease YjgP/YjgQ family protein [Methylocella silvestris BL2] Length = 361 Score = 65.0 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 51/355 (14%), Positives = 117/355 (32%), Gaps = 18/355 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + Y L + I + +V+ ++ + + S + ++ P+ Sbjct: 5 TLGRYFSARFLTLILAVFVTICGMVFVVDFVEMLRRTTDLPDASPRSVALLAMLRAPSAS 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PFC + + R ELLI G S + P + +AI++ I + N + Sbjct: 65 EQLMPFCVLCGSMAAFLDLTRKLELLIARAVGVSVWGFLVPPIAIAIVIGIGSVMLFNPV 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFR---LDDDLYIKISKYNPNN-TLQG--IFI 175 + ++ + LT + +++ R +D D IK + + L ++I Sbjct: 125 SAAMKQRADKIEVEIFGRLTQQNADADIWIRQKSVDGDAIIKARTMSRDGSRLTKPTVYI 184 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 D D + A+ + + + + S+ Y L + + Sbjct: 185 YDDHD-KFEAEVEAEHAQLSDG--VWRFEQARILMPGEETIETSV-----YLLASNLTPA 236 Query: 236 STIVLKANDQNLSF-LLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + Q+++F L+ + Y+ +F L + L + ++ I AA Sbjct: 237 QVARGPISPQSVAFWDLDAARRQTDRAGLDSTAYKLQFQSLLARPL--LFVAMVLIAAAF 294 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 R + ++ F ++ + P+ I+S+ Sbjct: 295 SLRFFRFGGIEKMVGGGVAAGFVLYVATKLVGDLGGAGLVSAPVAAWSPAVIASM 349 >gi|294084201|ref|YP_003550959.1| permease YjgP/YjgQ [Candidatus Puniceispirillum marinum IMCC1322] gi|292663774|gb|ADE38875.1| permease YjgP/YjgQ [Candidatus Puniceispirillum marinum IMCC1322] Length = 368 Score = 64.6 bits (156), Expect = 3e-08, Method: Composition-based stats. Identities = 55/360 (15%), Positives = 123/360 (34%), Gaps = 20/360 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINL--VSSSTESLNILLKISGYLIPT 59 + Y R L+ + I VIQ ++ + V+ S + ++ +P Sbjct: 8 GTLFRYFAFYYTRWILLCLFGLTVIISVIQSVELMRQKSVNKSDVEEISVSVLAMLNLPN 67 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ ++ PF + T + N++ E ++ G S + PVL A+ + + + N Sbjct: 68 IIEVILPFAVLIGTMLCFHAWNKSNEFVVTRGFGQSIWVSLSPVLVSALAIGVLFVMVIN 127 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYL--EENLF-FRLDDDLYIKISKYNPNNTLQGIFIV 176 I A ++ + E ++ + D++ I I N + Sbjct: 128 PIGAVTSKRYNSQMATLNDDISNNLTISESGIWLRDMQDNVKIII-----NGDALDMKTA 182 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIM--KFKSYTLQTESAN 234 + + + + Q+I L I D + + ++ + T Sbjct: 183 QISNPTIYSFVNGFELNWRVQAQSIQLTQMGWEVVDGIKWDSDGLQNELGTFIIPTNLEA 242 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + ++S P+ R L E H + F L+ I Sbjct: 243 VDLTRSGQSPHSISIYALPHFITVLERAGLPTINH-EIHF---NKILAFPFLLVGISMIA 298 Query: 295 KRALVR---QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 R VR + +++ + L I+ +F FSY++H + + ++ + I+ + + Sbjct: 299 TRITVRSINRGRQMKLVIKGLGIATCIFI-FSYLMHVMGTSLTVPALVAGWTPAITVLLI 357 >gi|213163295|ref|ZP_03349005.1| putative permease [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 137 Score = 64.6 bits (156), Expect = 3e-08, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 56/137 (40%) Query: 9 LRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFC 68 +R +S L ++ I + ++++ + N++L + G +P + ++ P Sbjct: 1 MRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLS 60 Query: 69 FAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRST 128 + L + +E+ ++ G S+ L+K + LA+ I ++ P Sbjct: 61 LFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMVLALFTGILAAVNVMWAGPWSSKH 120 Query: 129 IKQLSAKAQLALTFSYL 145 ++ A+A+ + L Sbjct: 121 QDEVLAEAKANPGMAAL 137 >gi|11465471|ref|NP_045138.1| hypothetical protein CycaCp121 [Cyanidium caldarium] gi|6466374|gb|AAF12956.1|AF022186_79 unknown [Cyanidium caldarium] Length = 397 Score = 64.2 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 62/382 (16%), Positives = 127/382 (33%), Gaps = 37/382 (9%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y+ + + FL + VFI + + ++ SS L I L+I +P Sbjct: 23 TILDSYLFKSLVLPFLFCWVSFVFIELSVGCVNQLMSDLSSGLPLEISLQILLLYLPLYA 82 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P N + +LL + T S L + VL + + II Sbjct: 83 YFALPITSFFSGLISFRIKNYSNQLLGVYITSISFSRLFRSVLIFTSAICGTTWCISEII 142 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEE---NLFFRLDDDL-----------YIKISKYNPN 167 P ++++ L KA L S E +F + + I +N Sbjct: 143 IPVSSNSLQVLHRKASLCARNSICSETSSGIFTNYYNSQSKKAPLKELKGVLYIKHFNHL 202 Query: 168 NTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 N Q I++ D + +++ A S D + + + + + Sbjct: 203 NAYQLIYL-DFNNENLKQLFLADSAKFDHFSRNWLFENMHIFSFDYDKELF--------- 252 Query: 228 LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEF---------HKRLTQ 278 + + + N + L D L+ ++N + +P + E ++L+ Sbjct: 253 VDSFNINMNLCNLSILDLKLNAVINKSQFSPFWMNAASIKMYKELSHLKTYSKSWRKLSL 312 Query: 279 WLFPVIFGLISIVA----ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY 334 L+ F IS + R + + FI + I+F + + Sbjct: 313 RLYQKYFTPISSIFLYSTGALMGSFRYKTQYLSFFIGILIAFQFYLSTFVTESAVILGII 372 Query: 335 YIPILYLFLFCISSIFLLMIKK 356 I ++ ++ I LL++++ Sbjct: 373 PIYFSFIVPTSLTVILLLVLRR 394 >gi|218296646|ref|ZP_03497364.1| permease YjgP/YjgQ family protein [Thermus aquaticus Y51MC23] gi|218242959|gb|EED09492.1| permease YjgP/YjgQ family protein [Thermus aquaticus Y51MC23] Length = 368 Score = 64.2 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 46/376 (12%), Positives = 122/376 (32%), Gaps = 34/376 (9%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + ++L+ ++ LF+ I + + +L+ Y +P VL Sbjct: 2 TLYRHLLKESLPVLFLTLLFLTAIFLFGFFYAGARWL--EGVPIPKILRWLSYHVPGVLV 59 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P T V + + + G P+L+L LLS+ + + Sbjct: 60 QAFPIALVTTTVLVFGRLAAEGAQFALLSGGVPLWRAALPLLWLGALLSVAALYLQEYVV 119 Query: 123 PKCRSTIK-QLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSRD 180 P+ + ++ + + + + + + ++ + G+ IV + Sbjct: 120 PEANNRVRVAWWDEIHTQGAGLFRLKGMQIPIGQGRSLYFEDFDMERKEMVGVRIVSFQ- 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILN---------------DGEVHRKSPISKDISIMK-FK 224 + +A+ G+ D + I L +G + + + + + Sbjct: 179 GEVGTFLFAERGT--WDDRLITLRGYRFYRVDFREVPGLEGARDLLAQVRRVFRAVSRGE 236 Query: 225 SYTLQTESANSSTIVLKANDQNLSF----LLNPNPNNPNYRPELLETYRSEFHKRLTQWL 280 ++++ + + I A+ + +P P + R EFH +L Sbjct: 237 VLEVESDLSRARAIADYADTFSFGQNSLSQAWRKARDPFLPPLERDRARLEFHSKLALP- 295 Query: 281 FPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY 340 ++ A+ + + + + LS+ + + ++ + + IP Sbjct: 296 -----LANLVLVLLAAAMALRYGRSTGLALGLSVVLALGYYGAFFLGRALAGVGAIPPE- 349 Query: 341 LFLFCISSIFLLMIKK 356 L + + +F L+ + Sbjct: 350 LGAWGANLLFFLLGVR 365 >gi|149194453|ref|ZP_01871550.1| hypothetical protein CMTB2_07626 [Caminibacter mediatlanticus TB-2] gi|149135628|gb|EDM24107.1| hypothetical protein CMTB2_07626 [Caminibacter mediatlanticus TB-2] Length = 338 Score = 63.8 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 31/195 (15%), Positives = 73/195 (37%), Gaps = 15/195 (7%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSST--ESLNILLKISGYLIPTVLPMV 64 YILR ++F+++ + + ++ + +S+ ++L I Y+ + ++ Sbjct: 5 YILRNYLKNFVITLIGFALLFVLVDYSFNFAKLPNSSNLQTLYIF-----YVFIDSIFIL 59 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P L M + EL+ + G ++KP+++ ++ I + ++ Sbjct: 60 YPLALVFAFLLTLNKMIKFNELVSFYSLGFKPFKILKPIIYFSLFFFILIMYLQSTKIAY 119 Query: 125 CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDTQT 183 K + QL +L+ N + + I + NP + I +D + Sbjct: 120 VNQYAKAIKNNMQLKNKNLFLKYN-------NSVVYIKELNPILKEAYDVKIFVVKDNKL 172 Query: 184 HKIYYAQSGSIDLDR 198 KI Y + + Sbjct: 173 IKIIYTKKAKFFKNH 187 >gi|213855151|ref|ZP_03383391.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 206 Score = 63.4 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 29/194 (14%), Positives = 63/194 (32%), Gaps = 22/194 (11%) Query: 166 PNNTLQGIFIVDSRDTQT--HKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISI 220 + +F+ R + A SG + Q + LN G + + +D I Sbjct: 5 DGSDFHDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNKGTRFEGTALLRDFRI 64 Query: 221 MKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWL 280 F++Y + + ++ L N + + R+E H R+T Sbjct: 65 TDFQNYQAIIGHQAVALDPNDTDQMDMRTLWNTDND----------RARAELHWRITLVF 114 Query: 281 FPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY 340 + L+ + RQ + +S+ + ++ F I I+ N + Sbjct: 115 TVFMMALMVVP--LSVVNPRQGR-----VLSMLPAMLLYLLFFLIQTSIKSNGGKGKLDP 167 Query: 341 LFLFCISSIFLLMI 354 + ++ L + Sbjct: 168 VIWMWAVNLIYLAL 181 >gi|332674268|gb|AEE71085.1| conserved hypothetical protein [Helicobacter pylori 83] Length = 355 Score = 63.4 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 59/364 (16%), Positives = 121/364 (33%), Gaps = 43/364 (11%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y + L LF V I L+ + + S N+++ Y I L P Sbjct: 10 YYFKYFLIVLLALELFFVGI----DSLKYADKMPD---SANMIILFFTYDILFALNYTLP 62 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + + ++ + + + G S+ ++ P+ L+S+F + Sbjct: 63 ISLLLAMVLFYIAFIKSNQYTALLSIGFSKCQILSPIF----LISLFFTAVYVGLNATPF 118 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDTQTHK 185 +++ + + E+L + +DD Y+ K NP Q I + +D Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDD-YVYFDKINPLLQKAQNIKVFRLKDKTLES 177 Query: 186 IYYAQSGSIDLDRQAIILNDGEVHRK------------SPISKDISIMK-FKSYTLQTES 232 A+ + + IL+D ++ + K +K F+ L T Sbjct: 178 YAEAKEAFF--EDKYWILHDTTIYEMPLSFELGNNALNTTHLKTFKTLKNFRPKVLDTIY 235 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 N + + +L L+ N + R L + P +S++ Sbjct: 236 QNKPAVSITDALLSLHALMRQNADTKKVRSFLY-----------VFAILPFFVPFLSVLI 284 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP----ILYLFLFCISS 348 A + + + + + + I V WG + + K + IP + FLF S Sbjct: 285 AYFSPSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFLFLALS 344 Query: 349 IFLL 352 ++ Sbjct: 345 LWYF 348 >gi|218679276|ref|ZP_03527173.1| permease YjgP/YjgQ family protein [Rhizobium etli CIAT 894] Length = 312 Score = 63.4 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 46/311 (14%), Positives = 101/311 (32%), Gaps = 21/311 (6%) Query: 50 LKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAIL 109 + ++ +P +L PF VL +NR EL++ G S + P + ++L Sbjct: 3 ILMTAVRLPLILQQTVPFIALFVGMTVLIGLNRKYELVVTRAAGISVWQFMSPFIAGSLL 62 Query: 110 LSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEEN----LFFRLDDDLYIKISKYN 165 L I + N + + + + + DD+ I Sbjct: 63 LGILTMTALNPLAAWGQRQALLVESDWRGENAVLRKAPQIPWLRQISGRDDVIIGAHTVQ 122 Query: 166 PNNT--LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKF 223 N T + + I Q A + L DG + + + + Sbjct: 123 ENGTKLIDAVLIHFDSSGQVILRQDAATAK---------LEDGYWQLNNVVERKPGEIPV 173 Query: 224 KSYTLQTESANSSTIV---LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWL 280 + ++Q + V L A + F L+ + ++F+ L+Q L Sbjct: 174 RKASVQLRTNLKQDFVQERLTAPETIGFFDLSNRIAAAKSFGISTKALETQFNSLLSQPL 233 Query: 281 FPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY 340 V I+ + K + Q + + I + F ++ + ++ + P + Sbjct: 234 LLVAMTFIAATVSLKFSRFNQSRSV--ILGGILSGFVLYVI-TVLVKAFGSSGVVPPFVA 290 Query: 341 LFLFCISSIFL 351 ++ + ++ L Sbjct: 291 TWIPVVVALAL 301 >gi|154148833|ref|YP_001406853.1| permease YjgP/YjgQ [Campylobacter hominis ATCC BAA-381] gi|153804842|gb|ABS51849.1| permease YjgP/YjgQ [Campylobacter hominis ATCC BAA-381] Length = 353 Score = 63.4 bits (153), Expect = 6e-08, Method: Composition-based stats. Identities = 57/366 (15%), Positives = 128/366 (34%), Gaps = 23/366 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK F+ YI + F++ + + F I +L + +S N+ L Sbjct: 1 MKIFQKYIGWTYFKYFVILFVALEFFYVGIDVLTNLKDFP---QSANLGLLYIAITAVAA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P +M RN E + G + +LI P +A+ ++ N Sbjct: 58 ITYTLPLSLVFALIIAKFNMIRNNEFISFFALGVPKNSLIIPPFLIALFITFGYISLNNT 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSR 179 I K K ++ A L L D +I +SK NP T + + +++ Sbjct: 118 IFVKAVKFQKNITNFASLNENADDL-----LLKYDGNFIYMSKLNPKEKTAKDVIFLETN 172 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVH---RKSPISKDISIMKFKSYTLQTESANSS 236 T ++ G + + + +D + + + KF+ + + + + Sbjct: 173 GTNLISKAISKKG--VYNDKKWLFSDVNTTFLPQNLRLGEQGLTYKFEKNAQKLNNFDPN 230 Query: 237 TI--VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 TI V ++ + + + ++T ++ FP+ + ++ Sbjct: 231 TIKNVYDSSQTYTIYEAIKSIKTFKNQGINVQTLKANL---FVMIFFPLFAPFMVLILYY 287 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP----ILYLFLFCISSIF 350 ++ + + + + I WG +++ + N IP IL +F+ + + Sbjct: 288 YLPVISRFFNLALLSFAFFIITLCVWGILFVLVRFSLNGVIIPEIGIILPIFVMFCYACY 347 Query: 351 LLMIKK 356 L + + Sbjct: 348 LFLKHR 353 >gi|308183601|ref|YP_003927728.1| hypothetical protein HPPC_07350 [Helicobacter pylori PeCan4] gi|308065786|gb|ADO07678.1| hypothetical protein HPPC_07350 [Helicobacter pylori PeCan4] Length = 355 Score = 63.1 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 58/364 (15%), Positives = 119/364 (32%), Gaps = 43/364 (11%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y + L LF V I L+ + + S N+++ Y I L P Sbjct: 10 YYFKYFLIVLLALELFFVGI----DSLKYADKMPD---SANMIILFFTYDILFALNYTLP 62 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + + ++ + + + G S+ ++ P+ L+S+F + Sbjct: 63 ISLLLAMVLFYITFIKSNQYTALLSIGFSKCQILSPIF----LISLFFTAVYVGLNATPF 118 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDTQTHK 185 +++ + + E+L + +DD Y+ K NP Q I + +D Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDD-YVYFDKINPLLQKAQNIKVFRLKDKTLES 177 Query: 186 IYYAQSGSIDLDRQAIILNDGEVHR-------KSPISKDISIMKFKSYT------LQTES 232 A+ + IL+D ++ + + FK+ L T Sbjct: 178 YAEAKEAFFK--DKYWILHDTTIYEMPLSFELGNNALNTTRLKTFKTLKNFRPKVLDTIY 235 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 N + + +L L+ N + R L + P +S++ Sbjct: 236 QNKPAVSITDALLSLHALMRQNADTKKVRSFLY-----------VFAILPFFVPFLSVLI 284 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP----ILYLFLFCISS 348 A + + + + + + I V WG + + K + IP + FLF S Sbjct: 285 AYFSPSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFLFLALS 344 Query: 349 IFLL 352 ++ Sbjct: 345 LWYF 348 >gi|88810917|ref|ZP_01126173.1| permease YjgP/YjgQ [Nitrococcus mobilis Nb-231] gi|88791456|gb|EAR22567.1| permease YjgP/YjgQ [Nitrococcus mobilis Nb-231] Length = 367 Score = 63.1 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 50/330 (15%), Positives = 111/330 (33%), Gaps = 8/330 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ E Y++R + F+++ ++ + I ++++++ G ++P Sbjct: 8 MKTAERYLMRAVAGGFVVAAAVLLPLFSFIDLIEQLDDTGQGNYHSAQAFAYVGLILPRR 67 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + PF + TT L + + EL + + G S + L +LL + L + + Sbjct: 68 LIELGPFIALLGTTVALGGLASHRELTALRSVGVSPGGIALAALKAGVLLILLLAAIDQL 127 Query: 121 IE-PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI-VDS 178 + P + + + D +++ I I + Sbjct: 128 VASPLQQHAFGMRATALSGDSNAESGSGAALWARRGDRLLRVGALRLGRIPADIEIFHFN 187 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + +A I R LN V K+ ++ + S QT + Sbjct: 188 AEGHLVRYIHADYAEI-HHRAPWRLN--TVLVKAFMAGTPVTTRHASMVWQTFLTPAQIG 244 Query: 239 VLKANDQNLSFL-LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +L+ ++LS + L + Y ++L L L+++ + Sbjct: 245 LLEKPAESLSPVQLYGYVQYLRSTGQSSAVYAVMLWQKLGLPLTAAAMILLAVPFSIGAP 304 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIH 327 R I + GV+ I++ Sbjct: 305 --RGASIGSRIALGAIAGLGVYLADQIIVN 332 >gi|320088911|emb|CBY98669.1| Lipopolysaccharide export system permease protein lptG [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 158 Score = 63.1 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 20/146 (13%), Positives = 56/146 (38%), Gaps = 6/146 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + + I++ ++ + + + L + +P Sbjct: 5 GVLDRYIGKTI---FTTIMMTLFMLVSLSGIIKFVDQLKKAGQGNYDALGAGMYTLLSVP 61 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L + + +EL+++ +G +R+ + V+ AI L + Sbjct: 62 KDIQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIG 121 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSY 144 + P+ + A+A ++ Sbjct: 122 EWVAPQGEQMARNYRAQAMYGGFAAF 147 >gi|307638154|gb|ADN80604.1| Permease [Helicobacter pylori 908] gi|325996753|gb|ADZ52158.1| Permease [Helicobacter pylori 2018] gi|325998348|gb|ADZ50556.1| hypothetical protein hp2017_1432 [Helicobacter pylori 2017] Length = 355 Score = 63.1 bits (152), Expect = 7e-08, Method: Composition-based stats. Identities = 58/364 (15%), Positives = 121/364 (33%), Gaps = 43/364 (11%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y + L LF V I L+ + + S N+++ Y I L P Sbjct: 10 YYFKYFLIVLLALELFFVGI----DSLKYADKMPD---SANMIILFFTYDILFALNYTLP 62 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + + ++ + + + G S+ ++ P+ F +S+F + Sbjct: 63 ISLLLAMVLFYITFIKSNQYTALLSIGFSKRQILNPIFF----ISLFFTAVYVGLNATPF 118 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDTQTHK 185 +++ + + E+L + +DD Y+ K NP Q I + +D Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDD-YVYFDKINPLLQKAQNIKVFRLKDKTLES 177 Query: 186 IYYAQSGSIDLDRQAIILNDGEVHRK------------SPISKDISIMK-FKSYTLQTES 232 A+ + + IL+D ++ + + +K F+ L T Sbjct: 178 YAEAKEAFF--EDKYWILHDTTIYEMPLSFELGANALNTTRLETFKTLKNFRPKVLDTIY 235 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 N + + +L L+ N + R L + P +S++ Sbjct: 236 QNKPAVSITDALLSLHALMRQNADTKKVRSFLY-----------VFAILPFFVPFLSVLI 284 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP----ILYLFLFCISS 348 A + + + + + + I V WG + + K + IP + FLF S Sbjct: 285 AYFSPSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFLFLALS 344 Query: 349 IFLL 352 ++ Sbjct: 345 LWYF 348 >gi|319405492|emb|CBI79111.1| conserved membrane hypothetical protein [Bartonella sp. AR 15-3] Length = 363 Score = 63.1 bits (152), Expect = 7e-08, Method: Composition-based stats. Identities = 47/359 (13%), Positives = 122/359 (33%), Gaps = 21/359 (5%) Query: 3 SFELYILRCIGRS---FLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPT 59 + Y ++ FL+ +V + + ++ L+ + IS P Sbjct: 5 TLGRYFFMLYLKTTCCFLLGVFILVLLIDFTENFSKLALLPYY--TAKGAFLISLLRTPL 62 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ + PF +L S+N+ EL+I + G S + P F A L +F + N Sbjct: 63 IIQQLFPFIALFSAITMLISLNKRLELVIARSIGISAWQFLTPACFGAFLFGLFSILFIN 122 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI------ 173 + S +++ A + + L + + + + Sbjct: 123 PLAAWSSSQSEKIVAAWRSNNNQISISNTRIPWLTQHTNLGRTTIGAKSIIHKDLSLIDA 182 Query: 174 -FIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 F+ + + + + A +L +G +++ K S ++ K++ + Sbjct: 183 TFVQYNENATVKNWINTKKAML--TDGAWLLINGTIYKIGQPPKKFSELRIKTH---LKP 237 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + + + L R + + H + + P++ ++++A Sbjct: 238 EFLTEYLAEPVTIPFYEL---PKKIAVARSFGYSANKFDMHLQ-SLIALPMLLVAMTLIA 293 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 A + + + + + I+ + + S ++ Y PI+ ++ I ++F Sbjct: 294 ATVSLKIPRFGQSKTLILGGIIAGFILYVISMLVRSFGNAGYIPPIIAAWVPVIVALFF 352 >gi|188528269|ref|YP_001910956.1| hypothetical protein HPSH_07675 [Helicobacter pylori Shi470] gi|188144509|gb|ACD48926.1| hypothetical protein HPSH_07675 [Helicobacter pylori Shi470] gi|308062762|gb|ADO04650.1| hypothetical protein HPCU_07550 [Helicobacter pylori Cuz20] Length = 355 Score = 62.7 bits (151), Expect = 8e-08, Method: Composition-based stats. Identities = 59/364 (16%), Positives = 121/364 (33%), Gaps = 43/364 (11%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y + L LF V I L+ + + S N+++ Y I L P Sbjct: 10 YYFKYFLIVLLALELFFVGI----DSLKYADKMPD---SANMIILFFTYDILFALNYTLP 62 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + + ++ + + + G S+ ++ P+ L+S+F + Sbjct: 63 ISLLLAMVLFYIAFIKSNQYTALLSIGFSKCQILSPIF----LISLFFTAVYVGLNATPF 118 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDTQTHK 185 +++ + + E+L + +DD Y+ K NP Q I + +D Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDD-YVYFDKINPLLQKAQNIKVFRLKDKTLES 177 Query: 186 IYYAQSGSIDLDRQAIILNDGEVHRK------------SPISKDISIMK-FKSYTLQTES 232 A+ + + IL+D ++ + K +K F+ L T Sbjct: 178 YAEAKEAFF--EDKYWILHDTTIYEMPLSFELGANALNTTRLKTFKTLKNFRPKVLDTIY 235 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 N + + +L L+ N + R L + P +S++ Sbjct: 236 QNKPAVSITDALLSLHALMRQNADTKKVRSFLY-----------VFAILPFFVPFLSVLI 284 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP----ILYLFLFCISS 348 A + + + + + + I V WG + + K + IP + FLF S Sbjct: 285 AYFSPSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFLFLALS 344 Query: 349 IFLL 352 ++ Sbjct: 345 LWYF 348 >gi|297380647|gb|ADI35534.1| Hypothetical protein HPV225_1517 [Helicobacter pylori v225d] gi|308064258|gb|ADO06145.1| hypothetical protein HPSAT_07215 [Helicobacter pylori Sat464] Length = 355 Score = 62.7 bits (151), Expect = 8e-08, Method: Composition-based stats. Identities = 59/364 (16%), Positives = 121/364 (33%), Gaps = 43/364 (11%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y + L LF V I L+ + + S N+++ Y I L P Sbjct: 10 YYFKYFLIVLLALELFFVGI----DSLKYADKMPD---SANMIILFFTYDILFALNYTLP 62 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + + ++ + + + G S+ ++ P+ L+S+F + Sbjct: 63 ISLLLAMVLFYIAFIKSNQYTALLSIGFSKCQILSPIF----LISLFFTTVYVGLNATPF 118 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDTQTHK 185 +++ + + E+L + +DD Y+ K NP Q I + +D Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDD-YVYFDKINPLLQKAQNIKVFRLKDKTLES 177 Query: 186 IYYAQSGSIDLDRQAIILNDGEVHRK------------SPISKDISIMK-FKSYTLQTES 232 A+ + + IL+D ++ + K +K F+ L T Sbjct: 178 YAEAKEAFF--EDKYWILHDTTIYEMPLSFELGANALNTTRLKTFKTLKNFRPKVLDTIY 235 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 N + + +L L+ N + R L + P +S++ Sbjct: 236 QNKPAVSITDALLSLHALMRQNADTKKVRSFLY-----------VFAILPFFVPFLSVLI 284 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP----ILYLFLFCISS 348 A + + + + + + I V WG + + K + IP + FLF S Sbjct: 285 AYFSPSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFLFLALS 344 Query: 349 IFLL 352 ++ Sbjct: 345 LWYF 348 >gi|153009929|ref|YP_001371144.1| permease YjgP/YjgQ family protein [Ochrobactrum anthropi ATCC 49188] gi|151561817|gb|ABS15315.1| permease YjgP/YjgQ family protein [Ochrobactrum anthropi ATCC 49188] Length = 362 Score = 62.7 bits (151), Expect = 9e-08, Method: Composition-based stats. Identities = 36/231 (15%), Positives = 78/231 (33%), Gaps = 15/231 (6%) Query: 3 SFELYIL---RCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPT 59 + Y I FL+ + + + +++ + S+ L +S +P Sbjct: 5 TLGRYFFIRYVQITFYFLLGIFALSLLLDFTENASKLSNLPDY--SVWAALGLSAMRVPF 62 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ + PF L S+NR EL++ + G S + P F A L + N Sbjct: 63 IMQQMIPFVALFSAMATLISLNRKYELVVARSVGVSAWQFLLPACFGAFLFGLATIFILN 122 Query: 120 IIEPKCRSTIKQLSAKAQLAL---TFSYLEENLFFRLDDDLYIKISK--YNPNNTLQGI- 173 + ++++ + + + L + D+ I +K + TL Sbjct: 123 PFAAYGFAKADEIASTWKTGKVTDVSALRDPWLRQKTDEGETIIGAKSILDQGATLADAT 182 Query: 174 FIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK 224 FI Y A++ + + +V R + + + F+ Sbjct: 183 FIQFDEKKNIKVRYDARTAQLKDGHWELT----DVTRFARGEEPQKMASFQ 229 >gi|207091759|ref|ZP_03239546.1| hypothetical protein HpylHP_01146 [Helicobacter pylori HPKX_438_AG0C1] Length = 355 Score = 62.3 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 57/364 (15%), Positives = 121/364 (33%), Gaps = 43/364 (11%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y + L LF V I L+ + + S N+++ Y I L P Sbjct: 10 YYFKYFLIVLLALELFFVGI----DSLKYADKMPD---SANMIILFFTYDILFALNYTLP 62 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + S ++ + + + G S+ ++ P+ L+S+F + Sbjct: 63 ISLLLAMVLFYISFIKSNQYTALLSIGFSKCQILSPIF----LISLFFTAVYVGLNATPF 118 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDTQTHK 185 +++ + + E+L + +DD Y+ K NP Q I + +D Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDD-YVYFDKINPLLQKAQNIKVFRLKDKTLES 177 Query: 186 IYYAQSGSIDLDRQAIILNDGEVHRK-------------SPISKDISIMKFKSYTLQTES 232 A+ + + IL+D ++ + + ++ F+ L T Sbjct: 178 YAEAKEAFF--EDKYWILHDTTIYEMPLKFELGANALNATRLKTFKTLKNFRPKVLDTIY 235 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 N + + +L L+ N + R L + P +S++ Sbjct: 236 QNKPAVSITDALLSLHALMRQNADTKKVRSFLY-----------VFAILPFFVPFLSVLI 284 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP----ILYLFLFCISS 348 A + + + + + + I V WG + + K + IP + F+F S Sbjct: 285 AYFSPSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFIFLALS 344 Query: 349 IFLL 352 ++ Sbjct: 345 LWYF 348 >gi|332088229|gb|EGI93350.1| hypothetical protein SD15574_3352 [Shigella dysenteriae 155-74] Length = 238 Score = 62.3 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 39/236 (16%), Positives = 74/236 (31%), Gaps = 32/236 (13%) Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVD 177 P + I QL ++Q L L F D+ I + +N L I Sbjct: 1 MYGRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIY- 59 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + +I+ A+S + SP + + +Y L + + + Sbjct: 60 TSTANRTRIFRARSVDVVD--------------PSPEKPTVMLHNGTAYLLDHQGRDDNE 105 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLE----------TYRSEFHKRLTQWLFPVIFGL 287 + +NL LNP +PN + + +E R ++ L ++ Sbjct: 106 QIY----RNLQLHLNPLDQSPNVKRKAKSVTELARSAFPADHAELQWRQSRGLTALLMA- 160 Query: 288 ISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 + + R RQ + + ++L + G IP L+L Sbjct: 161 -LLAISLSRVKPRQGRFSTLLPLTLLFIAIFYGGDVCRTLVANGAIPLIPGLWLVP 215 >gi|254780008|ref|YP_003058115.1| putative permease; putative membrane protein [Helicobacter pylori B38] gi|254001921|emb|CAX30174.1| Putative permease; putative membrane protein [Helicobacter pylori B38] Length = 355 Score = 62.3 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 58/364 (15%), Positives = 121/364 (33%), Gaps = 43/364 (11%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y + L LF V I L+ + + S N+++ Y I L P Sbjct: 10 YYFKYFLIVLLALELFFVGI----DSLKYADKMPD---SANMIILFFTYDILFALNYTLP 62 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + S ++ + + + G S+ ++ P+ L+S+F + Sbjct: 63 ISLLLAMVLFYISFIKSNQYTALLSIGFSKCQILSPIF----LISLFFTAVYVGLNATPF 118 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDTQTHK 185 +++ + + E+L + +DD Y+ K NP Q I + +D Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDD-YVYFDKINPLLQKAQNIKVFRLKDKTLES 177 Query: 186 IYYAQSGSIDLDRQAIILNDGEVHRK------------SPISKDISIMK-FKSYTLQTES 232 A+ + + IL+D ++ + + +K F+ L T Sbjct: 178 YAEAKEAFF--EDKYWILHDTTIYEMPLSFELGANALNTTRLETFKTLKNFRPKVLDTIY 235 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 N + + +L L+ N + R L + P +S++ Sbjct: 236 QNKPAVSITDALLSLHALMRQNADTKKVRSFLY-----------VFAILPFFVPFLSVLI 284 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP----ILYLFLFCISS 348 A + + + + + + I V WG + + K + IP + F+F S Sbjct: 285 AYFSPSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFVFLALS 344 Query: 349 IFLL 352 ++ Sbjct: 345 LWYF 348 >gi|261885753|ref|ZP_06009792.1| YjgP/YjgQ permease [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 253 Score = 62.3 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 42/268 (15%), Positives = 99/268 (36%), Gaps = 28/268 (10%) Query: 89 IDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEEN 148 + G + +F++ ++S+ + I+ I+ P + + + + ++ + Sbjct: 1 MFTLGQDPKNISNFFIFISFIVSVVMLINSLIVMPIAQ-NLNDNFIEYKKTKLSLNIKPS 59 Query: 149 LFFRLDDDLYIKISKYNPNN---TLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQA--IIL 203 F + + I K N NN + I + D D +QSG I +IL Sbjct: 60 EFGQKFGSWMVFIEKQNDNNDSLKYENIVMYDVSDENERL-ITSQSGDIKNQNSNLELIL 118 Query: 204 NDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPE 263 G+++ +IS +++ ++T ++ + L ++ + Sbjct: 119 KKGKMYDIRDNKWNIS--SYENMVIRTLIKDNKNETYSLKEYWLKAF----SDDKRAKDL 172 Query: 264 LLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFS 323 + T + LFP+ + ++ + + +K F + F F+ Sbjct: 173 SIYTLVA---------LFPLASVMFALSF---GIVTYRYEKGIIYFGIFGVLFAY---FA 217 Query: 324 YIIHKIEQNPYYIPILYLFLFCISSIFL 351 +I+ Q Y IPI+++ F S++ Sbjct: 218 FIMLFARQPIYAIPIIFIVSFVFSALTF 245 >gi|217033870|ref|ZP_03439294.1| hypothetical protein HP9810_870g2 [Helicobacter pylori 98-10] gi|216943633|gb|EEC23078.1| hypothetical protein HP9810_870g2 [Helicobacter pylori 98-10] Length = 355 Score = 62.3 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 57/364 (15%), Positives = 122/364 (33%), Gaps = 43/364 (11%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y + L LF V I L+ + + S N+++ Y I L P Sbjct: 10 YYFKYFLIVLLALELFFVGI----DSLKYADKMPD---SANMIILFFTYDILFALNYTLP 62 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + + ++ + + + G S+ ++ P+ L+S+F + Sbjct: 63 ISLLLAMVLFYIAFIKSNQYTALLSIGFSKCQILSPIF----LISLFFTAVYVGLNATPF 118 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDTQTHK 185 +++ + + E+L + +DD Y+ K NP Q I + +D Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDD-YVYFDKINPLLQKAQNIKVFRLKDKTLES 177 Query: 186 IYYAQSGSIDLDRQAIILNDGEVHRK-------------SPISKDISIMKFKSYTLQTES 232 A+ + + IL+D ++ + + ++ F+ L T Sbjct: 178 YAEAKEAFF--EDKYWILHDTIIYEMPLSFELGNNALNATHLKTFKTLKNFRPKVLDTIY 235 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 N + + +L L++ N + R L + P +S++ Sbjct: 236 QNKPAVSITDALLSLHALMHQNADTKKVRSFLY-----------VFAILPFFVPFLSVLI 284 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP----ILYLFLFCISS 348 A + + + + + + I V WG + + K + IP + FLF S Sbjct: 285 AYFSPSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFLFLALS 344 Query: 349 IFLL 352 ++ Sbjct: 345 LWYF 348 >gi|330443789|ref|YP_004376775.1| YjgP/YjgQ family protein [Chlamydophila pecorum E58] gi|328806899|gb|AEB41072.1| YjgP/YjgQ family protein [Chlamydophila pecorum E58] Length = 357 Score = 61.9 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 55/360 (15%), Positives = 122/360 (33%), Gaps = 27/360 (7%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 I R + ++ C + +I LQ I + + + +++ Y IP +LP + P Sbjct: 9 IFRYLKT--ILFCASSLIFISIISSLQEIVVYIAKDVPYATVFRLAAYQIPYLLPFILPA 66 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 + + ++ N ++ + +G S+ +I P+L ++I + F + + + CR Sbjct: 67 SCFISAYTLFKGLSDNNQITFLRASGASQGIIIFPILTISIAICCANFYTCSELASICRY 126 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 + A ++ L+ + +D + + + + RD + Sbjct: 127 KSCKEIANMAMSSPPLLLQ--TLQKREDSRVFIAVDHFAKSKFDNVIVALKRDDTISDVG 184 Query: 188 YAQSGSIDLDRQAIILNDGEVHRKSPIS---------KDISIMKFKSYTLQTESANSSTI 238 ++ D + + D K P S ++ I + + +A + Sbjct: 185 IIKAIIPDSEADTVQAKDVVYISKLPSSLSTPYTSPAQEYYIETVQELLIPKVTATLFSG 244 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + YR + ET R R L IV + Sbjct: 245 KSFMKSRTDYLTWKQLVRQAFYRTYIPETLR-----RAAIGLLCFTLTYSGIVIGTYKPR 299 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 R+ ++ F L + + + K + + + +LF IS +L+ I + Y Sbjct: 300 FRKTHFLYFTFPILDLVLLI-------VGKNTKTTFMAFMFFLFPQIIS--WLVFIYRSY 350 >gi|224534155|ref|ZP_03674735.1| permease, YjgP/YjgQ family [Borrelia spielmanii A14S] gi|224514580|gb|EEF84894.1| permease, YjgP/YjgQ family [Borrelia spielmanii A14S] Length = 355 Score = 61.9 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 18/120 (15%), Positives = 51/120 (42%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + ++ I +FL L + + + + + S +L I +P Sbjct: 2 KIDKLFVKSIILTFLSMNLLFMILIMLGDLFVNLLNYLEKNISFKDILYIYYLYLPKAFS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 F +N++ +++ E++ + + G S +++P++ +++ +S+ LF +N + Sbjct: 62 DGVALSFLFAISNLIGNLSMRNEIIGLFSCGVSLTRILRPIILISVFISVILFFFDNYLV 121 >gi|315585885|gb|ADU40266.1| conserved hypothetical protein [Helicobacter pylori 35A] Length = 355 Score = 61.9 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 57/364 (15%), Positives = 122/364 (33%), Gaps = 43/364 (11%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y + L LF V I L+ + + S N+++ Y I L P Sbjct: 10 YYFKYFLIVLLALELFFVGI----DSLKYADKMPD---SANMIILFFTYDILFALNYTLP 62 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + + ++ + + + G S+ ++ P+ L+S+F + + Sbjct: 63 ISLLLAMVLFYIAFIKSNQYTALLSIGFSKCQILSPIF----LISLFFTVVYVGLNATPF 118 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDTQTHK 185 +++ + + E+L + +DD Y+ K NP Q I + +D Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDD-YVYFDKINPLLQKAQNIKVFRLKDKTLES 177 Query: 186 IYYAQSGSIDLDRQAIILNDGEVHRK-------------SPISKDISIMKFKSYTLQTES 232 A+ + + IL+D ++ + + ++ F+ L T Sbjct: 178 YAEAKEAFF--EDKYWILHDTIIYEMPLSFELGNNALNATHLKTFKTLKNFRPKVLDTIY 235 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 N + + +L L+ N + R L + P +S++ Sbjct: 236 QNKPAVSITDALLSLHALMRQNADTKKVRSFLY-----------VFAILPFFVPFLSVLI 284 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP----ILYLFLFCISS 348 A + + + + + + I V WG + + K + IP + FLF S Sbjct: 285 AYFSPSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFLFLALS 344 Query: 349 IFLL 352 ++ Sbjct: 345 LWYF 348 >gi|208435366|ref|YP_002267032.1| hypothetical protein HPG27_1421 [Helicobacter pylori G27] gi|208433295|gb|ACI28166.1| hypothetical protein HPG27_1421 [Helicobacter pylori G27] Length = 355 Score = 61.9 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 57/364 (15%), Positives = 120/364 (32%), Gaps = 43/364 (11%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y + L LF V I L+ + + S N+++ Y I L P Sbjct: 10 YYFKYFLIVLLALELFFVGI----DSLKYADKMPD---SANMIILFFTYDILFALNYTLP 62 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + + ++ + + + G S+ ++ P+ L+S+F + Sbjct: 63 ISLLLAMVLFYIAFIKSNQYTALLSIGFSKCQILSPIF----LISLFFTAVYVGLNATPF 118 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDTQTHK 185 +++ + + E+L + +DD Y+ K NP Q I + +D Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDD-YVYFDKINPLLQKAQNIKVFRLKDKTLES 177 Query: 186 IYYAQSGSIDLDRQAIILNDGEVHR-------KSPISKDISIMKFKSYT------LQTES 232 A+ + + IL+D ++ + + FK+ L T Sbjct: 178 YAEAKEAFF--EDKYWILHDTTIYEMPSSFELGNNALNTTRLKTFKTLKNFRPKVLDTIY 235 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 N + + +L L+ N + R L + P +S++ Sbjct: 236 QNKPAVSITDALLSLHALVRQNADTKKVRSFLY-----------VFAILPFFVPFLSVLI 284 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP----ILYLFLFCISS 348 A + + + + + + I V WG + + K + IP + F+F S Sbjct: 285 AYFSPSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFVFLALS 344 Query: 349 IFLL 352 ++ Sbjct: 345 LWYF 348 >gi|332086636|gb|EGI91776.1| hypothetical protein SB521682_3570 [Shigella boydii 5216-82] Length = 238 Score = 61.9 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 40/239 (16%), Positives = 79/239 (33%), Gaps = 38/239 (15%) Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVD 177 P + I QL ++Q L L F D+ I + +N L I Sbjct: 1 MYGRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIY- 59 Query: 178 SRDTQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + +I+ A+S + ++ ++L++G +Y L + + Sbjct: 60 TSTANRTRIFRARSVDVVDPSTEKPTVMLHNGT-----------------AYLLDHQGRD 102 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLE----------TYRSEFHKRLTQWLFPVI 284 + + +NL LNP +PN + + +E R ++ L ++ Sbjct: 103 DNEQIY----RNLQLHLNPLDQSPNVKRKAKSVTELARSAFPADHAELQWRQSRGLTALL 158 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 L + + R RQ + + ++L + G IP L+L Sbjct: 159 MAL--LAISLSRVKPRQGRFSTLLPLTLLFIAIFYGGDVCRTLVANGAIPLIPGLWLVP 215 >gi|289548836|ref|YP_003473824.1| permease YjgP/YjgQ family protein [Thermocrinis albus DSM 14484] gi|289182453|gb|ADC89697.1| permease YjgP/YjgQ family protein [Thermocrinis albus DSM 14484] Length = 286 Score = 61.9 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 30/234 (12%), Positives = 75/234 (32%), Gaps = 13/234 (5%) Query: 11 CIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFA 70 R L+ F+ +++Q+++ L+ + + P Sbjct: 9 RTIRLSLLVSTFLTLSFFIVQLVKLDKLIFK--LPVFDAVGFMFLWWSYFFVYFIPSSLL 66 Query: 71 METTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIK 130 + L + N +L ++ G S ++ L L + + + ++ ST + Sbjct: 67 LSWCWNLYELKENKKLHVMQTFGISLGNVLFHTLLRLSPLLLAMAVGAYLLHQSDISTAR 126 Query: 131 QLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQ 190 + + + F+ D+ + + NT + +F+ A+ Sbjct: 127 NILLSKYYSKLLMGIPAGDFYT-AGDVTFYVGERE-GNTWKNVFL-----KTQDLTVVAK 179 Query: 191 SGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAND 244 + D I+L G V + + ++ +F Y L+ + + D Sbjct: 180 EAVLHSD--GILLKHGSVLTEKENKRFLA--RFDVYLLRLGTPPGTISQTTTKD 229 >gi|217031844|ref|ZP_03437347.1| hypothetical protein HPB128_199g52 [Helicobacter pylori B128] gi|298735532|ref|YP_003728053.1| hypothetical protein HPB8_32 [Helicobacter pylori B8] gi|216946496|gb|EEC25098.1| hypothetical protein HPB128_199g52 [Helicobacter pylori B128] gi|298354717|emb|CBI65589.1| conserved hypothetical protein [Helicobacter pylori B8] Length = 355 Score = 61.9 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 59/364 (16%), Positives = 121/364 (33%), Gaps = 43/364 (11%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y + L LF V I L+ + + S N+++ Y I L P Sbjct: 10 YYFKYFLIVLLALELFFVGI----DSLKYADKMPD---SANMIILFFTYDILFALNYTLP 62 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + S ++ + + + G S+ ++ P+ L+S+F + Sbjct: 63 ISLLLAMVLFYISFIKSNQYTALLSIGFSKCQILSPIF----LISLFFTAVYVGLNATPF 118 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDTQTHK 185 +++ + + E+L + +DD Y+ + NP Q I + +D Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDD-YVYFDEINPLLQKAQNIKVFRLKDKTLES 177 Query: 186 IYYAQSGSIDLDRQAIILNDGEVHRK------------SPISKDISIMK-FKSYTLQTES 232 A+ + + IL+D ++ + K +K F+ L T Sbjct: 178 YAEAKEAFF--EDKYWILHDTTIYEMPLSFELGANALSTTRLKTFKTLKNFRPKVLDTIY 235 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 N + + +L L+ N + R L + P +S++ Sbjct: 236 QNKPAVSITDALLSLHALVRQNADTKKVRSFLY-----------VFAILPFFVPFLSVLI 284 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP----ILYLFLFCISS 348 A + + + + + + I V WG + + K + IP + FLF S Sbjct: 285 AYFSPSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFLFLSLS 344 Query: 349 IFLL 352 ++ Sbjct: 345 LWYF 348 >gi|15646107|ref|NP_208289.1| hypothetical protein HP1498 [Helicobacter pylori 26695] gi|2314682|gb|AAD08544.1| predicted coding region HP1498 [Helicobacter pylori 26695] Length = 355 Score = 61.5 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 58/364 (15%), Positives = 121/364 (33%), Gaps = 43/364 (11%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y + L LF V I L+ + + S N+++ Y I L P Sbjct: 10 YYFKYFLIVLLALELFFVGI----DSLKYADKMPD---SANMIILFFTYDILFALNYTLP 62 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + + ++ + + + G S+ ++ P+ L+S+F + Sbjct: 63 ISLLLAMVLFYIAFIKSNQYTALLSIGFSKCQILSPIF----LISLFFTAIYVGLNATPF 118 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDTQTHK 185 +++ + + E+L + +DD Y+ K NP Q I + +D Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDD-YVYFDKINPLLQKAQNIKVFRLKDKTLES 177 Query: 186 IYYAQSGSIDLDRQAIILNDGEVHRK------------SPISKDISIMK-FKSYTLQTES 232 A+ + + IL+D ++ + K +K F+ L T Sbjct: 178 YAEAKEAFF--EDKYWILHDTTIYEMPLSFELGANALSTTRLKTFKTLKNFRPKVLDTIY 235 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 N + + +L L+ N + R L + P +S++ Sbjct: 236 QNKPAVSITDALLSLHALVRQNADTKKVRSFLY-----------VFAILPFFVPFLSVLI 284 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP----ILYLFLFCISS 348 A + + + + + + I V WG + + K + IP + F+F S Sbjct: 285 AYFSPSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFIFLALS 344 Query: 349 IFLL 352 ++ Sbjct: 345 LWYF 348 >gi|15612456|ref|NP_224109.1| hypothetical protein jhp1391 [Helicobacter pylori J99] gi|4156011|gb|AAD06972.1| putative [Helicobacter pylori J99] Length = 355 Score = 61.5 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 57/364 (15%), Positives = 121/364 (33%), Gaps = 43/364 (11%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y + L LF V I L+ + + S N+++ Y I L P Sbjct: 10 YYFKYFLIVLLALELFFVGI----DSLKYADKMPD---SANMIILFFTYDILFALNYTLP 62 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + + ++ + + + G S+ ++ P+ L+S+F + Sbjct: 63 ISLLLAMVLFYITFIKSNQYTALLSIGFSKCQILSPIF----LISLFFTAVYVGLNATPF 118 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDTQTHK 185 +++ + + E+L + +DD Y+ K NP Q I + +D Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDD-YVYFDKINPLLQKAQNIKVFRLKDKTLES 177 Query: 186 IYYAQSGSIDLDRQAIILNDGEVHRK------------SPISKDISIMK-FKSYTLQTES 232 A+ + + IL+D ++ + + +K F+ L T Sbjct: 178 YAEAKEAFF--EDKYWILHDTTIYEMPLSFELGANALNTTHLETFKTLKNFRPKVLDTIY 235 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 N + + +L L+ N + R L + P +S++ Sbjct: 236 QNKPAVSITDALLSLHALVRQNADTKKVRSFLY-----------VFAILPFFVPFLSVLI 284 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP----ILYLFLFCISS 348 A + + + + + + I V WG + + K + IP + F+F S Sbjct: 285 AYFSPSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFVFLALS 344 Query: 349 IFLL 352 ++ Sbjct: 345 LWYF 348 >gi|317013268|gb|ADU83876.1| hypothetical protein HPLT_07455 [Helicobacter pylori Lithuania75] Length = 355 Score = 61.5 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 58/364 (15%), Positives = 121/364 (33%), Gaps = 43/364 (11%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y + L LF V I L+ + + S N+++ Y I L P Sbjct: 10 YYFKYFLIVLLALELFFVGI----DSLKYADKMPD---SANMIILFFTYDILFALNYTLP 62 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + + ++ + + + G S+ ++ P+ L+S+F + Sbjct: 63 ISLLLAMVLFYIAFIKSNQYTALLSIGFSKCQILSPIF----LISLFFTAVYVGLNATPF 118 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDTQTHK 185 +++ + + E+L + +DD Y+ K NP Q I + +D Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDD-YVYFDKINPLLQKAQNIKVFRLKDKTLES 177 Query: 186 IYYAQSGSIDLDRQAIILNDGEVHRK------------SPISKDISIMK-FKSYTLQTES 232 A+ + + IL+D ++ + K +K F+ L T Sbjct: 178 YAEAKEAFFEY--KYWILHDTTIYEMPLSFELGANALSTTRLKTFKTLKNFRPKVLDTIY 235 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 N + + +L L+ N + R L + P +S++ Sbjct: 236 QNKPAVSITDALLSLHALMRQNADTKKVRSFLY-----------VFAILPFFVPFLSVLI 284 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP----ILYLFLFCISS 348 A + + + + + + I V WG + + K + IP + F+F S Sbjct: 285 AYFSPSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFVFLALS 344 Query: 349 IFLL 352 ++ Sbjct: 345 LWYF 348 >gi|317011633|gb|ADU85380.1| putative permease; putative membrane protein [Helicobacter pylori SouthAfrica7] Length = 355 Score = 61.5 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 58/364 (15%), Positives = 121/364 (33%), Gaps = 43/364 (11%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y + L LF V I L+ + + S N+++ Y I L P Sbjct: 10 YYFKYFLIVLLALELFFVGI----DSLKYADKMPD---SANMIILFFTYDILFALNYTLP 62 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + + ++ + + + G S+ ++ P+ F +S+F + Sbjct: 63 ISLLLAMVLFYIAFIKSNQYTALLSIGFSKRQILNPIFF----ISLFFTAVYVGLNATPF 118 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDTQTHK 185 +++ + + E+L + +DD Y+ K NP Q I + +D Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDD-YVYFDKINPLLQKAQNIKVFRLKDKTLES 177 Query: 186 IYYAQSGSIDLDRQAIILNDGEVHR-------KSPISKDISIMKFKSYT------LQTES 232 A+ + + IL+D ++ + + + FK+ L T Sbjct: 178 YAEAKEAFF--EDKYWILHDTTIYEMPLSFELGANALNTMRLETFKTLKNFRPKVLDTIY 235 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 N + + +L L+ N + R L + P +S++ Sbjct: 236 QNKPAVSITDALFSLHALMRQNADTKKVRSFLY-----------VFAILPFFVPFLSVLI 284 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP----ILYLFLFCISS 348 A + + + + + + I V WG + + K + IP + FLF S Sbjct: 285 AYFSPSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFLFLALS 344 Query: 349 IFLL 352 ++ Sbjct: 345 LWYF 348 >gi|109948225|ref|YP_665453.1| hypothetical protein Hac_1758 [Helicobacter acinonychis str. Sheeba] gi|109715446|emb|CAK00454.1| conserved hypothetical protein [Helicobacter acinonychis str. Sheeba] Length = 355 Score = 61.5 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 60/364 (16%), Positives = 120/364 (32%), Gaps = 43/364 (11%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y + L LF V I L+ + + S N+++ Y I L P Sbjct: 10 YYFKYFLIVLLALELFFVGI----DSLKYADKMPD---SANMIILFFTYDILFALNYTLP 62 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + + ++ + + + G S+ ++KP+ F +S+F + Sbjct: 63 ISLLLAMVLFYITFIKSNQYTALLSIGFSKCQVLKPIFF----ISLFFTAIYVGLNATPF 118 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDTQTHK 185 +++ + + E+L + DDD Y+ K +P Q I + +D Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYDDD-YVYFGKIDPLLQKAQNIKVFRLKDKTLES 177 Query: 186 IYYAQSGSIDLDRQAIILNDGEVH----RKSPISKDISIM---------KFKSYTLQTES 232 A + + L+D ++ + +S M F+ L T Sbjct: 178 YAEANEAFF--EGKHWTLHDATIYSLPLNFDLGNNALSAMHLETFKTLKNFRPKVLDTIY 235 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 N + + +L L+ + R L + P +S+ Sbjct: 236 QNKPAVSIMDALFSLHALVRQKADTKKVRSFLY-----------VFAILPFFVPFLSVFI 284 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP----ILYLFLFCISS 348 A + + + + + + I V WG + + K + IP +L FLF I S Sbjct: 285 AYFSPSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPELGVLLPFFLFLIIS 344 Query: 349 IFLL 352 ++ Sbjct: 345 LWYF 348 >gi|308185268|ref|YP_003929401.1| hypothetical protein HPSJM_07640 [Helicobacter pylori SJM180] gi|308061188|gb|ADO03084.1| hypothetical protein HPSJM_07640 [Helicobacter pylori SJM180] Length = 355 Score = 61.5 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 59/371 (15%), Positives = 124/371 (33%), Gaps = 41/371 (11%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y + L LF V I L+ + + S N+++ Y I L P Sbjct: 10 YYFKYFLIVLLALELFFVGI----DSLKYADKMPD---SANMIILFFTYDILFALNYTLP 62 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + + ++ + + + G S+ ++ P+ L+S+F + Sbjct: 63 ISLLLAMVLFYITFIKSNQYTALLSIGFSKCQILNPIF----LISLFFTAVYVGLNATPF 118 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDTQTHK 185 +++ + + E+L + +DD Y+ K NP Q I + +D Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDD-YVYFDKINPLLQKAQNIKVFRLKDKTLES 177 Query: 186 IYYAQSGSIDLDRQAIILNDGEVHRK------------SPISKDISIMK-FKSYTLQTES 232 A+ + + IL+D ++ + K +K F+ L T Sbjct: 178 YAEAKEAFF--EDKYWILHDTTIYEMPLSFELGANALSTTRLKTFKTLKNFRPKVLDTIY 235 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 N + + +L L+ N + R L + P +S++ Sbjct: 236 QNKPAVSITDALLSLHALVRQNADTKKVRSFLY-----------VFAILPFFVPFLSVLI 284 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF--LFCISSIF 350 A + + + + + + I V WG + + K + IP + + F ++ Sbjct: 285 AYFSPSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFVFLALS 344 Query: 351 LLMIKKKYTKI 361 L KK ++ Sbjct: 345 LWYFKKLNKRL 355 >gi|210135665|ref|YP_002302104.1| hypothetical protein HPP12_1476 [Helicobacter pylori P12] gi|210133633|gb|ACJ08624.1| hypothetical protein HPP12_1476 [Helicobacter pylori P12] Length = 355 Score = 61.5 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 58/364 (15%), Positives = 121/364 (33%), Gaps = 43/364 (11%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y + L LF V I L+ + + S N+++ Y I L P Sbjct: 10 YYFKYFLIVLLALELFFVGI----DSLKYADKMPD---SANMIILFFTYDILFALNYTLP 62 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + + ++ + + + G S+ ++ P+ L+S+F + Sbjct: 63 ISLLLAMVLFYITFIKSNQYTALLSIGFSKCQILSPIF----LISLFFTAVYVGLNATPF 118 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDTQTHK 185 +++ + + E+L + +DD Y+ K NP Q I + +D Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDD-YVYFDKINPLLQKAQNIKVFRLKDKTLES 177 Query: 186 IYYAQSGSIDLDRQAIILNDGEVHRK------------SPISKDISIMK-FKSYTLQTES 232 A+ + + IL+D ++ + K +K F+ L T Sbjct: 178 YAEAKEAFF--EDKYWILHDTTIYEMPLSFELGANALSTTRLKTFKTLKNFRPKVLDTIY 235 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 N + + +L L+ N + R L + P +S++ Sbjct: 236 QNKPAVSITDALLSLHALVRQNADTKKVRSFLY-----------VFAILPFFVPFLSVLI 284 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP----ILYLFLFCISS 348 A + + + + + + I V WG + + K + IP + F+F S Sbjct: 285 AYFSPSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFIFLALS 344 Query: 349 IFLL 352 ++ Sbjct: 345 LWYF 348 >gi|203284704|ref|YP_002222444.1| hypothetical protein BDU_816 [Borrelia duttonii Ly] gi|203288236|ref|YP_002223251.1| hypothetical protein BRE_819 [Borrelia recurrentis A1] gi|201084147|gb|ACH93738.1| uncharacterized conserved protein [Borrelia duttonii Ly] gi|201085456|gb|ACH95030.1| hypothetical protein BRE_819 [Borrelia recurrentis A1] Length = 402 Score = 61.5 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 51/120 (42%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + + I +FL V + + +L + S+N ++ I +P Sbjct: 49 KVDKIFVNNILLTFLFMNFLFVILIVLFDLLTNLLNYLEHNLSINDIIYIYYLYLPKCFS 108 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 F +N+L +++ E++ + + G S +++ ++ L++ +S+ LF +N + Sbjct: 109 DGVALSFLFAVSNLLGNLSMRNEIIGLFSCGISIARILRSIIMLSVFVSVILFFFDNYLV 168 >gi|239831520|ref|ZP_04679849.1| permease YjgP/YjgQ family protein [Ochrobactrum intermedium LMG 3301] gi|239823787|gb|EEQ95355.1| permease YjgP/YjgQ family protein [Ochrobactrum intermedium LMG 3301] Length = 362 Score = 61.5 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 36/231 (15%), Positives = 79/231 (34%), Gaps = 15/231 (6%) Query: 3 SFELYIL---RCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPT 59 + Y I FL+ + + + +++ + S+ L +S +P Sbjct: 5 TLGRYFFIRYVQITFYFLLGIFALSLLLDFTENASKLSNLPDY--SVWAALGLSAMRVPF 62 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ + PF L S+NR EL++ + G S + P F A L + N Sbjct: 63 IMQQMIPFVALFSAMATLISLNRKYELVVARSVGVSAWQFLLPACFGAFLFGLATIFILN 122 Query: 120 IIEPKCRSTIKQLSAKAQLALT---FSYLEENLFFRLDDDLYIKISK--YNPNNTLQGI- 173 + ++++ + T + + L + D+ I +K + TL Sbjct: 123 PFAAYGFAKADEIASTWKTGKTTDVSALRDPWLRQKTDEGETIIGAKSILDQGATLADAT 182 Query: 174 FIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK 224 FI + + A+ + + +V R + + + F+ Sbjct: 183 FIQFDEKKNIRERFDARRAQLRDGHWELT----DVTRFARGEEPQKMASFQ 229 >gi|111115643|ref|YP_710261.1| hypothetical protein BAPKO_0861 [Borrelia afzelii PKo] gi|110890917|gb|ABH02085.1| hypothetical protein BAPKO_0861 [Borrelia afzelii PKo] Length = 355 Score = 61.5 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 17/120 (14%), Positives = 50/120 (41%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + ++ I +FL L + + + + + SL + I +P Sbjct: 2 KIDKLFVKSIILTFLSMNLIFMILIILGDLFVNLLNFLEKNISLKDIFYIYYLYLPKAFS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 F +N++ +++ E++ + + G +++P++ +++ +S+ LF +N + Sbjct: 62 DGVALSFLFAISNLIGNLSMRNEIIGLFSCGVPLTRILRPIILISVFISVVLFFFDNYLV 121 >gi|317181181|dbj|BAJ58967.1| hypothetical protein HPF32_1385 [Helicobacter pylori F32] Length = 355 Score = 61.5 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 57/364 (15%), Positives = 120/364 (32%), Gaps = 43/364 (11%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y + L LF V I L+ + + S N+++ Y I L P Sbjct: 10 YYFKYFLIVLLALELFFVGI----DSLKYADKMPD---SANMIILFFTYDILFALNYTLP 62 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + + ++ + + + G S+ ++ P+ L+S+F + Sbjct: 63 ISLLLAMVLFYIAFIKSNQYTALLSIGFSKCQILSPIF----LISLFFTAVYVGLNATPF 118 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDTQTHK 185 +++ + + E+L + +DD Y+ K NP Q I + +D Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDD-YVYFDKINPLLQKAQNIKVFRLKDKTLES 177 Query: 186 IYYAQSGSIDLDRQAIILNDGEVHRK------------SPISKDISIMK-FKSYTLQTES 232 A+ + + IL+D ++ + K +K F+ L T Sbjct: 178 YAEAKEAFF--EDKYWILHDTTIYEMPLKFELGANALNTTHLKTFKTLKNFRPKVLDTIY 235 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 N + + +L L+ N + R L + P +S++ Sbjct: 236 QNKPAVSITDALLSLHALVRQNADTKKVRSFLY-----------VFAILPFFVPFLSVLI 284 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP----ILYLFLFCISS 348 A + + + + + + I V WG + + K + IP + +F S Sbjct: 285 AYFSPSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFLVFLALS 344 Query: 349 IFLL 352 ++ Sbjct: 345 LWYF 348 >gi|317010128|gb|ADU80708.1| hypothetical protein HPIN_07620 [Helicobacter pylori India7] Length = 355 Score = 61.1 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 58/364 (15%), Positives = 121/364 (33%), Gaps = 43/364 (11%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y + L LF V I L+ + + S N+++ Y I L P Sbjct: 10 YYFKYFLIVLLALELFFVGI----DSLKYADKMPD---SANMIILFFTYDILFALNYTLP 62 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + + ++ + + + G S+ ++ P+ L+S+F + Sbjct: 63 ISLLLAMVLFYIAFIKSNQYTALLSIGFSKCQILSPIF----LISLFFTAVYVGLNATPF 118 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDTQTHK 185 +++ + + E+L + +DD Y+ K NP Q I + +D Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDD-YVYFDKINPLLQKAQNIKVFRLKDKTLES 177 Query: 186 IYYAQSGSIDLDRQAIILNDGEVHRK------------SPISKDISIMK-FKSYTLQTES 232 A+ + + IL+D ++ + K +K F+ L T Sbjct: 178 YAEAKEAFF--EDKYWILHDTTIYEMPLSFELGANALSTTRLKTFKTLKNFRPKVLDTIY 235 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 N + + +L L+ N + R L + P +S++ Sbjct: 236 QNKPAVSITDALLSLHALVRQNADTKKVRSFLY-----------VFAILPFFVPFLSVLI 284 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP----ILYLFLFCISS 348 A + + + + + + I V WG + + K + IP + F+F S Sbjct: 285 AYFSPSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFVFLALS 344 Query: 349 IFLL 352 ++ Sbjct: 345 LWYF 348 >gi|108563840|ref|YP_628156.1| hypothetical protein HPAG1_1415 [Helicobacter pylori HPAG1] gi|107837613|gb|ABF85482.1| hypothetical protein HPAG1_1415 [Helicobacter pylori HPAG1] Length = 355 Score = 61.1 bits (147), Expect = 3e-07, Method: Composition-based stats. Identities = 57/364 (15%), Positives = 121/364 (33%), Gaps = 43/364 (11%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y + L LF V I L+ + + S N+++ Y I L P Sbjct: 10 YYFKYFLIVLLALELFFVGI----DSLKYADKMPD---SANMIILFFTYDILFALNYTLP 62 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + S ++ + + + G S+ ++ P+ L+S+F + Sbjct: 63 ISLLLAMVLFYISFIKSNQYTALLSIGFSKCQILSPIF----LISLFFTAVYVGLNATPF 118 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDTQTHK 185 +++ + + E+L + +DD Y+ K NP Q I + +D Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDD-YVYFDKINPLLQKAQNIKVFRLKDRTLES 177 Query: 186 IYYAQSGSIDLDRQAIILNDGEVHRK-------------SPISKDISIMKFKSYTLQTES 232 A+ + + IL+D ++ + + ++ F+ L T Sbjct: 178 YAEAKEAFF--EDKYWILHDTTIYEMPLKFELGTNALNATRLKTFKTLKNFRPKVLDTIY 235 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 N + + +L L+ N + R L + P +S++ Sbjct: 236 QNKPAVSITDALLSLHALVRQNADTKKVRSFLY-----------VFAILPFFVPFLSVLI 284 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP----ILYLFLFCISS 348 A + + + + + + I V WG + + K + IP + F+F S Sbjct: 285 AYFSPSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFIFLALS 344 Query: 349 IFLL 352 ++ Sbjct: 345 LWYF 348 >gi|269963274|ref|ZP_06177606.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269831989|gb|EEZ86116.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 235 Score = 60.7 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 30/201 (14%), Positives = 68/201 (33%), Gaps = 26/201 (12%) Query: 158 YIKISKYNPNNTLQGIFIVDSR--DTQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKS 212 + I ++TL +F+ R D+ + ++ SG + RQ I +++G + Sbjct: 27 VVFIDDI-KDSTLSNVFVAQMRPRDSILPSVMFSSSGEVKELSDGRQIITMHEGTRYEGV 85 Query: 213 PISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLL-NPNPNNPNYRPELLETYRSE 271 P + + KF Y + L+ +P+P ++E Sbjct: 86 PTRVEYMVTKFDQYEGVIGQREVKQKGRDWEAYPTADLIGHPDPE-----------AQAE 134 Query: 272 FHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ 331 R++ + L++++ A+ ++ + + ++ I F S +E Sbjct: 135 LQWRISL-FVCI--PLLTMLVIPLSAVNPRQGRFAKMGPAILIYLAYFLAISATKSALED 191 Query: 332 -----NPYYIPILYLFLFCIS 347 PI + L Sbjct: 192 GAIPATIGMWPINAMLLIVAI 212 >gi|261838772|gb|ACX98538.1| hypothetical protein KHP_1349 [Helicobacter pylori 51] Length = 355 Score = 60.7 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 59/364 (16%), Positives = 121/364 (33%), Gaps = 43/364 (11%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y + L LF V I L+ + + S N+++ Y I L P Sbjct: 10 YYFKYFLIVLLALELFFVGI----DSLKYADKMPD---SANMIILFFTYDILFALNYTLP 62 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + + ++ + + + G S+ ++ P+ L+S+F + Sbjct: 63 ISLLLAMVLFYIAFIKSNQYTALLSIGFSKCQILSPIF----LISLFFTAVYVGLNATPF 118 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDTQTHK 185 +++ + + E+L + +DD Y+ K NP Q I + +D Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDD-YVYFDKINPLLQKAQNIKVFRLKDKTLES 177 Query: 186 IYYAQSGSIDLDRQAIILNDGEVHRK------------SPISKDISIMK-FKSYTLQTES 232 A+ + + IL+D ++ + K +K F+ L T Sbjct: 178 YAEAKEAFF--EDKYWILHDTIIYEMPLSFELGANALNTTHLKTFKTLKNFRPKVLDTIY 235 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 N + + +L L+ N + R L + P +S++ Sbjct: 236 QNKPAVSITDALLSLHALVRQNADTKKVRSFLY-----------VFAILPFFVPFLSVLI 284 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP----ILYLFLFCISS 348 A + + + + + + I V WG + + K + IP + FLF S Sbjct: 285 AYFSPSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFLFLALS 344 Query: 349 IFLL 352 ++ Sbjct: 345 LWYF 348 >gi|217032588|ref|ZP_03438077.1| hypothetical protein HPB128_159g14 [Helicobacter pylori B128] gi|216945724|gb|EEC24349.1| hypothetical protein HPB128_159g14 [Helicobacter pylori B128] Length = 249 Score = 60.7 bits (146), Expect = 4e-07, Method: Composition-based stats. Identities = 45/264 (17%), Positives = 95/264 (35%), Gaps = 19/264 (7%) Query: 99 LIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLY 158 + K + L++L+S L + I+ P +S + + + F + D Sbjct: 1 MTKAFVPLSLLVSAILLVFSLILIPTSKSAYYGFLRQ-KKDKIDINIRAGEFGQKLGDWL 59 Query: 159 IKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDI 218 + + K NN+ + + ++ AQ G+I+ LN + H + Sbjct: 60 VYVDK-AENNSYDNLVLFSNKSLSQESFILAQKGNINNQNGVFELNLYKGHAYFTQGDKM 118 Query: 219 SIMKFKSYTL--QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRL 276 + F+ L + +S NS+ L + N N + +R Sbjct: 119 RKVDFEELHLRNKLKSFNSNDAAYLQGTDYLGYWKKAFGKNANKNQK----------RRF 168 Query: 277 TQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 +Q + +F L S+ + R K + + + + GV+ ++H I + + + Sbjct: 169 SQAILVSLFPLASVFLIPLFGIANPRFKTNWSYFYVLGAVGVY---FLMVHVISTDLFLM 225 Query: 337 PILYLFLFCISSIFLL--MIKKKY 358 + F++ S L I K+Y Sbjct: 226 TFFFPFIWAFGSYLLFRKFILKRY 249 >gi|118474677|ref|YP_891476.1| permease YjgP/YjgQ [Campylobacter fetus subsp. fetus 82-40] gi|118413903|gb|ABK82323.1| permease YjgP/YjgQ [Campylobacter fetus subsp. fetus 82-40] Length = 353 Score = 60.4 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 69/202 (34%), Gaps = 9/202 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK F Y + F++ + + I L + S I L ++ T Sbjct: 1 MKLFSKYTGLVYLKYFIIIFMALELFYIGIDTLTNLKDFPKSANLQLIYLSLTAL---TA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P +M R+ EL+ + G S+ TLI ++++++ + Sbjct: 58 VNYVLPISLVFALIVSKINMIRSNELVSFYSLGISKNTLILSPFIISLIITCLYIYLSST 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 R K L + + + F + ++ +I I + P I I +++ Sbjct: 118 SFAYARDYQKSLINFQGFNKSSNSI----FLK-YENKFIYIDELYPAIGEANKIKIFETQ 172 Query: 180 DTQTHKIYYAQSGSIDLDRQAI 201 D A+ + + + Sbjct: 173 DGDIIGQITAKKAKFEDNSWKL 194 >gi|216263485|ref|ZP_03435480.1| conserved hypothetical integral membrane protein [Borrelia afzelii ACA-1] gi|215980329|gb|EEC21150.1| conserved hypothetical integral membrane protein [Borrelia afzelii ACA-1] Length = 390 Score = 60.4 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 61/164 (37%), Gaps = 3/164 (1%) Query: 44 ESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPV 103 Y +P V+ + PF + + + E+L + G S L+ P Sbjct: 9 VPFFKAFIFIIYSLPMVIALSPPFASLISVILTIHKFKIHNEILAFRSIGISIFDLLIPF 68 Query: 104 LFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISK 163 L I++ FIS +I+ P ++ + + + L+ + DL + Sbjct: 69 FKLGIIIVFISFISNDILLPLGSIGRLKIFNEIKEEVPHLVLKPYS-SKQYGDLIFVSGE 127 Query: 164 YNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAI--ILND 205 + N F ++R +I+ A++ I + + ILND Sbjct: 128 KSENGYKNVTFFDNTRLKGFDRIFMAKNLDIRKENFQVYFILND 171 >gi|257462586|ref|ZP_05626996.1| hypothetical protein FuD12_01959 [Fusobacterium sp. D12] Length = 93 Score = 60.4 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 37/91 (40%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YIL+ ++S FI + I+ + + S+ + +I + +P + Sbjct: 3 MKIINSYILKESRGPIVLSVSIFTFIFLLDIIVTMMESIIVKGISVFDVARILSFYVPPI 62 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDN 91 L P + + R++E + +++ Sbjct: 63 LTQTLPLGLFVGIMITFSKFTRSSEAIAMNS 93 >gi|317014913|gb|ADU82349.1| hypothetical protein HPGAM_07880 [Helicobacter pylori Gambia94/24] Length = 355 Score = 60.4 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 58/364 (15%), Positives = 121/364 (33%), Gaps = 43/364 (11%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y + L LF V I L+ + + S N+++ Y I L P Sbjct: 10 YYFKYFLIVLLALELFFVGI----DSLKYADKMPD---SANMIILFFTYDILFALNYTLP 62 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + + ++ + + + G S+ ++ P+ F +S+F + Sbjct: 63 ISLLLAMVLFYITFIKSNQYTALLSIGFSKRQILNPIFF----ISLFFTAVYVGLNATPF 118 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDTQTHK 185 +++ + + E+L + +DD Y+ K NP Q I + +D Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDD-YVYFDKINPLLQKAQNIKVFRLKDRTLES 177 Query: 186 IYYAQSGSIDLDRQAIILNDGEVHRK------------SPISKDISIMK-FKSYTLQTES 232 A+ + + IL+D ++ + + +K F+ L T Sbjct: 178 YAEAKEAFF--EDKYWILHDTTIYEMPLSFELGANALNTTRLETFKTLKNFRPKVLDTIY 235 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 N + + +L L+ N + R L + P +S++ Sbjct: 236 QNKPAVSITDALFSLHALVRQNADTKKVRSFLY-----------VFAILPFFVPFLSVLI 284 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP----ILYLFLFCISS 348 A + + + + + + I V WG + + K + IP + FLF S Sbjct: 285 AYFSPSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFLFLALS 344 Query: 349 IFLL 352 ++ Sbjct: 345 LWYF 348 >gi|327537720|gb|EGF24427.1| hypothetical protein RBWH47_05036 [Rhodopirellula baltica WH47] Length = 430 Score = 60.4 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 22/149 (14%), Positives = 55/149 (36%), Gaps = 4/149 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS---TESLNILL-KISGYL 56 M + Y+L R+ + L + I V ++ + + +SL ++L K G Sbjct: 1 MTQIDRYVLILFLRTVCVCFLSLAGIFIVFHAFTAMDDLIAQSKVGDSLPLVLAKFYGPY 60 Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 + + M M + R EL + G S +++P++ ++ + Sbjct: 61 LLLLFDMTGTIITLMAFLFTAGWLRRTGELTATLSAGVSHGRILRPMIIASLAIISVQLA 120 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYL 145 + + P+ R ++ + + + + Sbjct: 121 NREWVIPRFRDSLTMKAKNLSGDIEQAVM 149 >gi|317182703|dbj|BAJ60487.1| hypothetical protein HPF57_1413 [Helicobacter pylori F57] Length = 355 Score = 60.4 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 58/364 (15%), Positives = 121/364 (33%), Gaps = 43/364 (11%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y + L LF V I L+ + + S N+++ Y I L P Sbjct: 10 YYFKYFLIVLLALELFFVGI----DSLKYADKMPD---SANMIILFFTYDILFALNYTLP 62 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + + ++ + + + G S+ ++ P+ L+S+F + Sbjct: 63 ISLLLAMVLFYIAFIKSNQYTALLSIGFSKCQILSPIF----LISLFFTTVYVGLNATPF 118 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDTQTHK 185 +++ + + E+L + +DD Y+ K NP Q I + +D Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDD-YVYFDKINPLLQKAQNIKVFRLKDKTLES 177 Query: 186 IYYAQSGSIDLDRQAIILNDGEVHRK------------SPISKDISIMK-FKSYTLQTES 232 A+ + + IL+D ++ + K +K F+ L T Sbjct: 178 YAEAKEAFF--EDKYWILHDTIIYEMPLSFELGNNALNTTHLKTFKTLKNFRPKVLDTIY 235 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 N + + +L L+ N + R L + P +S++ Sbjct: 236 QNKPAVSITDALLSLHALVRQNADTKKVRSFLY-----------VFAILPFFVPFLSVLI 284 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP----ILYLFLFCISS 348 A + + + + + + I V WG + + K + IP + F+F S Sbjct: 285 AYFSPSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFVFLALS 344 Query: 349 IFLL 352 ++ Sbjct: 345 LWYF 348 >gi|317179675|dbj|BAJ57463.1| hypothetical protein HPF30_1366 [Helicobacter pylori F30] Length = 355 Score = 60.4 bits (145), Expect = 5e-07, Method: Composition-based stats. Identities = 57/364 (15%), Positives = 121/364 (33%), Gaps = 43/364 (11%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y + L LF V I L+ + + S N+++ Y I L P Sbjct: 10 YYFKYFLIVLLALELFFVGI----DSLKYADKMPD---SANMIILFFTYDILFALNYTLP 62 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + + ++ + + + G S+ ++ P+ L+S+F + Sbjct: 63 ISLLLAMVLFYIAFIKSNQYTALLSIGFSKCQILSPIF----LISLFFTAVYVGLNATPF 118 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDTQTHK 185 +++ + + E+L + +DD Y+ K NP Q I + +D Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDD-YVYFDKINPLLQKAQNIKVFRLKDKTLES 177 Query: 186 IYYAQSGSIDLDRQAIILNDGEVHRK-------------SPISKDISIMKFKSYTLQTES 232 A+ + + IL+D ++ + + ++ F+ L T Sbjct: 178 YAEAKEAFF--EDKYWILHDTIIYEMPLSFELGANALNATHLKTFKTLKNFRPKVLDTIY 235 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 N + + +L L+ N + R L + P +S++ Sbjct: 236 QNKPAVSITDALLSLHALVRQNADTKKVRSFLY-----------VFAILPFFVPFLSVLI 284 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP----ILYLFLFCISS 348 A + + + + + + I V WG + + K + IP + FLF S Sbjct: 285 AYFSPSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFLFLALS 344 Query: 349 IFLL 352 ++ Sbjct: 345 LWYF 348 >gi|34558361|ref|NP_908176.1| permease [Wolinella succinogenes DSM 1740] gi|34484080|emb|CAE11076.1| conserved hypothetical protein-PREDICTED PEMEASE [Wolinella succinogenes] Length = 355 Score = 60.0 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 50/374 (13%), Positives = 124/374 (33%), Gaps = 37/374 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M ++ + F + L + I +L+ + S N+++ Y Sbjct: 1 MSLAFRFLGALYLKYFFILLLALETFFVGIDLLKFAEELP---PSANLVVLFVVYDALYA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + + + R EL + + G S+ + P+L +A+L + + Sbjct: 58 LNFILPIALVLAQILLFVVLLRTNELTALLSIGYSKRQITTPLLGIALLFTFGFIVLNA- 116 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 P + +++ ++ E LF + D YI K P +G+ + Sbjct: 117 -TPFAYAK-ERVDTILDQGYVGNFKRE-LFVK-YHDSYIYFDKIYPLLQKAEGVKVYRLE 172 Query: 180 DTQTHKIYYAQSGSIDLDRQAI----ILNDGEVHRKSPISKDISIMKFK--------SYT 227 + + A+ + + ++ ++ + F Sbjct: 173 GDRVAQWIEAKEARFVDNHWRLNEAMVMTIPSELTLGGSPLEVEKVDFMEVLEGFRPRIL 232 Query: 228 LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGL 287 + + ++ A + ++S LL N+ R L + LFP L Sbjct: 233 DSIYERHGAVSIIDAIE-SMSLLLEQQVNSQKIRGILY-----------SLVLFPFFAPL 280 Query: 288 ISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP----ILYLFL 343 ++ A + + + I + + +FWG + + ++ + + P ++ + L Sbjct: 281 CMVLVAYYMPITMRYGNLAIIVFAAILGVLLFWGLFFALSRLSMSGFIHPEVSLLIPMIL 340 Query: 344 FCISSIFLLMIKKK 357 + ++F + Sbjct: 341 WTALALFFWRRLAR 354 >gi|296532232|ref|ZP_06894979.1| permease YjgP/YjgQ family protein [Roseomonas cervicalis ATCC 49957] gi|296267439|gb|EFH13317.1| permease YjgP/YjgQ family protein [Roseomonas cervicalis ATCC 49957] Length = 369 Score = 60.0 bits (144), Expect = 6e-07, Method: Composition-based stats. Identities = 18/140 (12%), Positives = 52/140 (37%), Gaps = 1/140 (0%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTES-LNILLKISGYLIPTVL 61 + YI R L + + + ++ + ++ ++ ++ I+ +P V+ Sbjct: 6 TLSAYIARRFAGMALAMVAALAALVALFDFIELLRRAATRADAGFALVASIAALRLPYVV 65 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF + ++R +EL++ G S + + + +A+ + + + Sbjct: 66 LQILPFAVLLGGIVAFWRLSRASELVVARAAGVSAWSFLLGPVLVALAMGTLAITVVSPL 125 Query: 122 EPKCRSTIKQLSAKAQLALT 141 + ++L A T Sbjct: 126 SAAMMARAERLDATYLRNAT 145 >gi|330813915|ref|YP_004358154.1| putative permease YjgP/YjgQ family protein [Candidatus Pelagibacter sp. IMCC9063] gi|327487010|gb|AEA81415.1| putative permease YjgP/YjgQ family protein [Candidatus Pelagibacter sp. IMCC9063] Length = 375 Score = 60.0 bits (144), Expect = 6e-07, Method: Composition-based stats. Identities = 50/360 (13%), Positives = 114/360 (31%), Gaps = 25/360 (6%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTE--SLNILLKISGYLIPTVLPMV 64 Y + S L+ L ++ +I + + + + + ++ PT + + Sbjct: 12 YFSKEFIFSLLLVFLVFFSLSLLINSVGELIYLKDKKLENVIWMATILTLAKTPTTIIEL 71 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII--E 122 + F F + +N E+ + G S+ P+L +I+ I + Sbjct: 72 SIFIFLFSGILFFVKIQKNNEVNTMLLAGISK---TLPILIPSIISFICGLFIIFFLTSI 128 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLY-----IKISKYNPNN--TLQGIFI 175 + + + + + ++ I+ K NN L + I Sbjct: 129 SSASLNFYEQEKRIYSSNDNLIVMNKMGLWFMENTTSGYNIIRADKIEKNNFNILNNVTI 188 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRK------SPISKDISIMKFKSYTLQ 229 + D + + S I ++++ LN +V ++ S D S+++ S+ Sbjct: 189 YNL-DQGFNFVKRYDSEKITINQKRWSLNKTQVTQEKKSLSDSKKDNDASLVE-MSFDSS 246 Query: 230 TESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 + N + + N R E R +FHK L+ + +F +I Sbjct: 247 ININDLKNYFTDVNTVSFWEMFK-TIKTLNSRGYSAEELRVKFHKYLSLPFY--LFAMIL 303 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 + +Q +F + +++ I N + I + I Sbjct: 304 VSTTFTMGANKQYNTFMYLFFGTILGVCIYFLNDLSISFGLSNKLPLAISVWSPVGLIII 363 >gi|317178203|dbj|BAJ55992.1| hypothetical protein HPF16_1395 [Helicobacter pylori F16] Length = 355 Score = 60.0 bits (144), Expect = 6e-07, Method: Composition-based stats. Identities = 57/371 (15%), Positives = 124/371 (33%), Gaps = 41/371 (11%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y + L LF V I L+ + + S N+++ Y I L P Sbjct: 10 YYFKYFLIVLLALELFFVGI----DSLKYADKMPD---SANMIILFFTYDILFALNYTLP 62 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + + ++ + + + G S+ ++ P+ L+S+F + Sbjct: 63 ISLLLAMVLFYIAFIKSNQYTALLSIGFSKCQILSPIF----LISLFFTAVYVGLNATPF 118 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDTQTHK 185 +++ + + E+L + +DD Y+ K NP Q I + +D Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDD-YVYFDKINPLLQKAQNIKVFRLKDKTLES 177 Query: 186 IYYAQSGSIDLDRQAIILNDGEVHRK-------------SPISKDISIMKFKSYTLQTES 232 A+ + + IL+D ++ + + ++ F+ L T Sbjct: 178 YAEAKEAFF--EDKYWILHDTIIYEMPLSFELGNNALNATHLKTFKTLKNFRPKVLDTIY 235 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 N + + +L L+ N + R L + P +S++ Sbjct: 236 QNKPAVSITDALLSLHALVRQNADTKKVRSFLY-----------VFAILPFFVPFLSVLI 284 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF--LFCISSIF 350 A + + + + + + I V WG + + K + IP + + F ++ Sbjct: 285 AYFSPSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFVFLALS 344 Query: 351 LLMIKKKYTKI 361 L KK ++ Sbjct: 345 LWYFKKLNKRL 355 >gi|219684936|ref|ZP_03539877.1| permease, YjgP/YjgQ family [Borrelia garinii PBr] gi|219671674|gb|EED28730.1| permease, YjgP/YjgQ family [Borrelia garinii PBr] Length = 355 Score = 59.6 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 17/120 (14%), Positives = 49/120 (40%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + ++ I +FL L + + + + + +L I +P Sbjct: 2 KIDKLFVKSIILTFLSMNLLFMILIILGDLFVNLLSYLEKNIGFKDILYIYYLYLPKAFS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 F +N++ +++ E++ + + G S +++P++ +++ +S LF +N + Sbjct: 62 DGVALSFLFAISNLIGNLSMRNEIIGLFSCGVSLTRILRPIILISLFISFVLFFFDNYLV 121 >gi|223038562|ref|ZP_03608855.1| methionyl-tRNA formyltransferase [Campylobacter rectus RM3267] gi|222879964|gb|EEF15052.1| methionyl-tRNA formyltransferase [Campylobacter rectus RM3267] Length = 353 Score = 59.6 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 61/376 (16%), Positives = 121/376 (32%), Gaps = 43/376 (11%) Query: 1 MKSFELYI----LRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYL 56 M + Y+ + F+ LF V I + + S S N+ L G Sbjct: 1 MNLYARYVGWLYFKYFVILFVALTLFYVGIDILTN-------LKSMPASANLKLLYFGLT 53 Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 T + V P SM R+ EL+ G + LIKP ++A+ ++ Sbjct: 54 SLTAVNYVLPLSLIFALIASEFSMIRSNELVSFYALGIDKNRLIKPPFYIALTITFVYVG 113 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFI 175 + + + L+ T S + F + + ++ + NP + + + I Sbjct: 114 LNFTPFAYAYEYGRNIVKLSNLSRTSSDI----FLK-FEGKFVYMDSLNPISGEAKDVRI 168 Query: 176 VDSRDTQTHKIYYAQSGSIDLD----RQAIILNDGEVHRKSPISKDISIM-------KFK 224 D + + S D +QA I+N + + DI + FK Sbjct: 169 FDINGSNLRSATFGLSARFVDDLWLVKQAKIVNLPQNIKLGEKGLDIKRLGELKTLENFK 228 Query: 225 SYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVI 284 T++ +A SS I + + N + + L + + P + Sbjct: 229 PKTIENAAAESSAITISDAVDYIQAFKNEGIGLNSVKTTLYNLA-------FSPFFAPFM 281 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP----ILY 340 +I + +I+ WG +++ + +N P +L Sbjct: 282 VLIIYYFLPVTGRFF----NLALKSFIFTIASLCVWGALFVMMRFARNGVISPEIGVLLP 337 Query: 341 LFLFCISSIFLLMIKK 356 + L + +L + Sbjct: 338 VILLGTYAFYLHFKAR 353 >gi|219685681|ref|ZP_03540495.1| permease, YjgP/YjgQ family [Borrelia garinii Far04] gi|219672797|gb|EED29822.1| permease, YjgP/YjgQ family [Borrelia garinii Far04] Length = 355 Score = 59.6 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 17/120 (14%), Positives = 49/120 (40%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + ++ I +FL L + + + + + +L I +P Sbjct: 2 KIDKLFVKSIILTFLSMNLLFMILIILGDLFVNLLSYLEKNIGFKDILYIYYLYLPKAFS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 F +N++ +++ E++ + + G S +++P++ +++ +S LF +N + Sbjct: 62 DGVALSFLFAISNLIGNLSMRNEIIGLFSCGVSLTRILRPIILISLFISFVLFFFDNYLV 121 >gi|312148449|gb|ADQ31108.1| putative permease, YjgP/YjgQ family [Borrelia burgdorferi JD1] Length = 355 Score = 59.6 bits (143), Expect = 8e-07, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 50/120 (41%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + ++ I +FL L + + + + + L +L I +P Sbjct: 2 KIDKLFIKSIILTFLSMNLLFMILIMLGDLFVNLLNYLEKNIGLKDILYIYYLYLPKAFS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 F +N++ +++ E++ + + G ++KP++ ++I +S+ LF +N + Sbjct: 62 DGVALSFLFAISNLIGNLSMRNEIIGLFSCGVPLTRILKPIILISIFISVVLFFFDNYLV 121 >gi|187918662|ref|YP_001884228.1| hypothetical protein BH0808 [Borrelia hermsii DAH] gi|119861510|gb|AAX17305.1| hypothetical protein BH0808 [Borrelia hermsii DAH] Length = 355 Score = 59.6 bits (143), Expect = 8e-07, Method: Composition-based stats. Identities = 17/120 (14%), Positives = 50/120 (41%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + + I +FL V + + + + S++ ++ I +P Sbjct: 2 KVDKLFVNNISLTFLFMNFLFVILIVLFDLFTNLFTYLDHNLSISDIIYIYYLYLPKCFS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 F +N++ +++ E++ + + G S +++ ++ L++ +S+ LF +N + Sbjct: 62 DGLALSFLFAVSNLIGNLSMRNEIIGLFSCGISISRILRSIIMLSVFISVLLFFFDNYLV 121 >gi|119953585|ref|YP_945795.1| hypothetical protein BT0808 [Borrelia turicatae 91E135] gi|119862356|gb|AAX18124.1| hypothetical protein BT0808 [Borrelia turicatae 91E135] Length = 355 Score = 59.2 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 18/120 (15%), Positives = 51/120 (42%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + + I +FL V + +I + + S++ ++ I +P Sbjct: 2 KVDKLFVNNISLTFLFMNFLFVILIVLIDLFTNLFNYLDHNLSISDIVYIYYLYLPKCFS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 F +N++ +++ E++ + + G S +++ ++ L++ +S+ LF +N + Sbjct: 62 DGLALSFLFAVSNLIGNLSMRNEIIGLFSCGISISRILRSIIMLSVFISVMLFFFDNYLV 121 >gi|15595153|ref|NP_212942.1| hypothetical protein BB0808 [Borrelia burgdorferi B31] gi|195941982|ref|ZP_03087364.1| hypothetical protein Bbur8_03794 [Borrelia burgdorferi 80a] gi|216264628|ref|ZP_03436620.1| putative permease, YjgP/YjgQ family protein [Borrelia burgdorferi 156a] gi|218249833|ref|YP_002375306.1| putative permease, YjgP/YjgQ family protein [Borrelia burgdorferi ZS7] gi|221217616|ref|ZP_03589085.1| permease, YjgP/YjgQ family [Borrelia burgdorferi 72a] gi|223889339|ref|ZP_03623926.1| permease, YjgP/YjgQ family [Borrelia burgdorferi 64b] gi|224533064|ref|ZP_03673669.1| permease, YjgP/YjgQ family [Borrelia burgdorferi WI91-23] gi|224533456|ref|ZP_03674049.1| permease, YjgP/YjgQ family [Borrelia burgdorferi CA-11.2a] gi|225549381|ref|ZP_03770353.1| permease, YjgP/YjgQ family [Borrelia burgdorferi 94a] gi|225550246|ref|ZP_03771205.1| permease, YjgP/YjgQ family [Borrelia burgdorferi 118a] gi|226321273|ref|ZP_03796801.1| permease, YjgP/YjgQ family [Borrelia burgdorferi Bol26] gi|2688753|gb|AAC67159.1| predicted coding region BB0808 [Borrelia burgdorferi B31] gi|215981101|gb|EEC21908.1| putative permease, YjgP/YjgQ family protein [Borrelia burgdorferi 156a] gi|218165021|gb|ACK75082.1| putative permease, YjgP/YjgQ family protein [Borrelia burgdorferi ZS7] gi|221192562|gb|EEE18780.1| permease, YjgP/YjgQ family [Borrelia burgdorferi 72a] gi|223885260|gb|EEF56363.1| permease, YjgP/YjgQ family [Borrelia burgdorferi 64b] gi|224512000|gb|EEF82396.1| permease, YjgP/YjgQ family [Borrelia burgdorferi WI91-23] gi|224513418|gb|EEF83776.1| permease, YjgP/YjgQ family [Borrelia burgdorferi CA-11.2a] gi|225369114|gb|EEG98568.1| permease, YjgP/YjgQ family [Borrelia burgdorferi 118a] gi|225370009|gb|EEG99450.1| permease, YjgP/YjgQ family [Borrelia burgdorferi 94a] gi|226233305|gb|EEH32056.1| permease, YjgP/YjgQ family [Borrelia burgdorferi Bol26] gi|312149740|gb|ADQ29811.1| putative permease, YjgP/YjgQ family [Borrelia burgdorferi N40] Length = 355 Score = 59.2 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 50/120 (41%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + ++ I +FL L + + + + + L +L I +P Sbjct: 2 KIDKLFIKSIILTFLSMNLLFMILIMLGDLFVNLLNYLEKNIGLKDILYIYYLYLPKAFS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 F +N++ +++ E++ + + G ++KP++ ++I +S+ LF +N + Sbjct: 62 DGVALSFLFAISNLIGNLSMRNEIIGLFSCGVPLTRILKPIILISIFISVVLFFFDNYLV 121 >gi|222824356|ref|YP_002575930.1| hypothetical protein Cla_1363 [Campylobacter lari RM2100] gi|222539577|gb|ACM64678.1| conserved hypothetical integral membrane protein [Campylobacter lari RM2100] Length = 353 Score = 59.2 bits (142), Expect = 9e-07, Method: Composition-based stats. Identities = 63/374 (16%), Positives = 127/374 (33%), Gaps = 39/374 (10%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F YI +SF + + F I L N + S N+ L +L + Sbjct: 1 MNVFFRYISSLYLKSFFILFFSLTFFFVAIDFLVNFNKIPK---SANLELLYILFLTCSA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIK-PVLFLAILLSIFLFISEN 119 + + P + +M R+ E + + G S+ +I P L+ L F++I N Sbjct: 58 VSYILPLAIVFALILCVFNMIRSNEFVSLYALGLSKNQVIFYPFLW--ALFFCFVYIGLN 115 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 P + + + S N+ + D+ ++ I + N+L + I D + Sbjct: 116 F-TPFAYAN--EYKSNIIKTGLVSREGGNVLIK-YDNKFVYI-EKTSTNSLYNVKIFDVK 170 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEV----HRKSPISKDISIMKFKSYT-------- 227 + ++ A+ + Q+ L D + + + + I FKS Sbjct: 171 NLDIKQLTQAKKAQF--NGQSWELIDVKTIKVPDKLIVSQEGLKIKDFKSIKGLENFSPK 228 Query: 228 -LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFG 286 L+ S S +D S L+ + T R+ + P Sbjct: 229 ILERISLVESDPSYSISDALESILIF------AKQDISTNTLRTSL---YSLVFIPFFAP 279 Query: 287 LISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN----PYYIPILYLF 342 + +V + + + + IS WG +++ ++ +N P + +L +F Sbjct: 280 FLMLVIYYYFPITARFFNLAFLAFVFFISVLSAWGLLFLLTRLSENEILLPEFGIMLPIF 339 Query: 343 LFCISSIFLLMIKK 356 + + K Sbjct: 340 ILICMGSWFYYKNK 353 >gi|32491206|ref|NP_871460.1| hypothetical protein WGLp457 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166413|dbj|BAC24603.1| yjgQ [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 352 Score = 59.2 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 110/253 (43%), Gaps = 16/253 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + YI I ++ +++ ++ I+ +I+ ++I + +S S+ L+ +P + Sbjct: 4 ILDRYIRSLIFKTTIVALFILLTISGIIKFSEKIQSIDNSYISIFYLISTILLSVPKDIE 63 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + + + +N EL+II+++G SRI + ++ I+ I I Sbjct: 64 EFFNISILIGILWSIGILEKNRELIIIESSGISRIKICILIIKTIIIFLFIYSIILEWII 123 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEE---NLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 P + K + F+++ E NL+ +++++ +I I K + +QGI+I + Sbjct: 124 P--------IEKKIKSKYFFNFISENKKNLWIKINNN-FILIKKIVDFDFIQGIYIYEFN 174 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKS--YTLQTESANSST 237 K + +I +++ I+ D + + + +K I I F YT + Sbjct: 175 KFNEIKYIKSSKYAIFKNKE-WIMFDVKTIKFN-NNKKIEINSFDKQIYTNIITPKEINL 232 Query: 238 IVLKANDQNLSFL 250 I+ + ++S L Sbjct: 233 ILFPTEELSISEL 245 >gi|291277020|ref|YP_003516792.1| inner membrane protein OxaA [Helicobacter mustelae 12198] gi|290964214|emb|CBG40063.1| putative integral membrane protein [Helicobacter mustelae 12198] Length = 354 Score = 58.8 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 59/366 (16%), Positives = 125/366 (34%), Gaps = 35/366 (9%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y+ R R L+ + I L+ ++ S S N+++ Y L P Sbjct: 4 YLGRQFFRFILIVFSALEIFFISIDSLKYLDQFPS---SANLIVLFFAYDFLYALNYTLP 60 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + T ++ ++ + G +R ++ PV F+++ + + Sbjct: 61 ISILLATIIFYLNLVKSNQYTAFLALGYTRKQILAPVFFISLTFTFLYVGLNATPFVYAQ 120 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSRDTQTHK 185 + + ++ F+ + E+L + +++ Y+ K P + I + + D Q Sbjct: 121 ERAEAIMSQEN----FTNITEDLLVKYENN-YVYFQKLYPLIKRAENIKVFEL-DKQGRL 174 Query: 186 IYYAQSGSIDLDRQAIILNDGEVHRKSPIS------------KDISIMK-FKSYTLQTES 232 +AQ+ +L+ + + + + I+K F+ L T Sbjct: 175 QSFAQAKDAIFLHNYWVLSHASISKVPEETTLGKAGLEVSEVDKLKILKGFRPKILDTIY 234 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 N ++ + Q+L L N + N+ R L L P L SI+ Sbjct: 235 QNKPSVSIIDAIQSLIILQNQDSNSEKIRAILY-----------AFILIPFFVPLTSIII 283 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP-ILYLFLFCISSIFL 351 + + + + + V WG + K+ + P I+ L F + + Sbjct: 284 GFYAPTLSRYSNLALLGFMFIVLALVIWGLFFAFGKLSISGLLPPEIMMLIPFGLLCVLS 343 Query: 352 LMIKKK 357 L KK Sbjct: 344 LFYFKK 349 >gi|168704909|ref|ZP_02737186.1| hypothetical protein GobsU_35554 [Gemmata obscuriglobus UQM 2246] Length = 366 Score = 58.8 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 49/367 (13%), Positives = 109/367 (29%), Gaps = 21/367 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS----TESLNILLKISGYL 56 M + + L RS+++ + +V + VI + ++ + S + G Sbjct: 1 MTAIDRMFLWTFFRSYIIVLISLVGLFIVIDLFTHLDAFVNKPGGFVASARHITYYYGNR 60 Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 +P + F + + M RN ELL + + G I+PV A + + Sbjct: 61 VPEYFDLFGNFVTLIAGAFTVAWMQRNNELLPLLSAGVPTRRAIRPVFLGAAVTLALGPL 120 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEE----NLFFRLDDDLYIKISKYNPNNTLQG 172 ++ + P+ + A S + + F K + Sbjct: 121 NQEFLIPEVADALTSQRDDPDQAKAQSLMGAYDSSGIHFEGLAG----FRKDKLVKKMCV 176 Query: 173 IFIVDSRDTQTHKIYYAQSGSIDLDR------QAIILNDGEVHRKSPISK-DISIMKFKS 225 F SR H AQ + +L D + +++++ Sbjct: 177 TFPEHSRSGMVHLT--AQEAVFRPKQGDDPLTGGWLLTDATPDTFTGEIPLNLTVLGTGR 234 Query: 226 YTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIF 285 + ++ + A+ + + + + P FH R+T+ L ++ Sbjct: 235 FFVKVQDADYDAVCRGGAWYIYAATSDLQTMLVDPEPRRRGKLAVLFHTRVTRPLVGMVM 294 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC 345 + + I + +F Y+ + P L + LF Sbjct: 295 VVFGLAVILGNPNRHVIISSGLCLIVSAATFLFVIACKYLGDQDVLPPPLAAWLPVILFG 354 Query: 346 ISSIFLL 352 ++ Sbjct: 355 PPALVAF 361 >gi|51599060|ref|YP_073248.1| hypothetical protein BG0834 [Borrelia garinii PBi] gi|51573631|gb|AAU07656.1| hypothetical protein BG0834 [Borrelia garinii PBi] Length = 355 Score = 58.8 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 17/120 (14%), Positives = 50/120 (41%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ ++ I +FL L + + + + + +L I +P Sbjct: 2 KIDMLFVKSIILTFLSMNLLFMILIILGDLFVNLLSYLEKNIGFKDILYIYYLYLPKAFS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 F +N++ +++ E++ + + G S +++P++ +++ +S LF +N + Sbjct: 62 DGVALSFLFAISNLIGNLSMRNEIIGLFSCGVSLTRILRPIILISLFISFVLFFFDNYLV 121 >gi|261840174|gb|ACX99939.1| hypothetical protein HPKB_1402 [Helicobacter pylori 52] Length = 355 Score = 58.4 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 58/371 (15%), Positives = 122/371 (32%), Gaps = 41/371 (11%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y + L LF V I L+ + + S N+++ Y I L P Sbjct: 10 YYFKYFLIVLLALELFFVGI----DSLKYADKMPD---SANMIILFFTYDILFALNYTLP 62 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + + ++ + + + G S+ ++ P+ L+S+F + Sbjct: 63 ISLLLAMVLFYIAFIKSNQYTALLSIGFSKCQILSPIF----LISLFFTAIYVGLNATPF 118 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDTQTHK 185 +++ + + E+L + +DD Y+ K NP Q I + + Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDD-YVYFDKINPLLQKAQNIKVFRLKGKTLES 177 Query: 186 IYYAQSGSIDLDRQAIILNDGEVHR-------KSPISKDISIMKFKSYT------LQTES 232 A+ + + IL+D ++ + + FK+ L T Sbjct: 178 YAEAKEAFF--EDKYWILHDTIIYEMPLSFELGNNALNTTRLKTFKTLKNFRPKVLDTIY 235 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 N + + +L L+ N + R L + P +S++ Sbjct: 236 QNKPAVSITDALLSLHALVRQNADTKKVRSFLY-----------VFAILPFFVPFLSVLI 284 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF--LFCISSIF 350 A + + + + + + I V WG + + K + IP + + F S+ Sbjct: 285 AYFSPSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFVFLSLS 344 Query: 351 LLMIKKKYTKI 361 L KK ++ Sbjct: 345 LWYFKKLNKRL 355 >gi|320101900|ref|YP_004177491.1| permease YjgP/YjgQ family protein [Isosphaera pallida ATCC 43644] gi|319749182|gb|ADV60942.1| permease YjgP/YjgQ family protein [Isosphaera pallida ATCC 43644] Length = 392 Score = 58.0 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 21/133 (15%), Positives = 57/133 (42%), Gaps = 4/133 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGY----L 56 ++ + +++++ +V + VI ++ + L +++ G+ Sbjct: 5 IRILDRQRYWSFVKAYVICFSSLVGLYIVIHAFANVDEFGKAAPGLMGVVRAMGFYYLIR 64 Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 I + M +T M ++ +L+ + G S I+PVL ++L+S+ I Sbjct: 65 ISQYYDQLCGVIAMMAAIFTVTFMQKDNQLVAMLAAGISTHRAIRPVLVCSVLVSLLAVI 124 Query: 117 SENIIEPKCRSTI 129 ++ +I P+ ++ + Sbjct: 125 NQELILPRFQTEL 137 >gi|315638229|ref|ZP_07893411.1| integral membrane protein [Campylobacter upsaliensis JV21] gi|315481765|gb|EFU72387.1| integral membrane protein [Campylobacter upsaliensis JV21] Length = 350 Score = 58.0 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 29/209 (13%), Positives = 77/209 (36%), Gaps = 13/209 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F +I ++F + +V I +L + +S + + + G+ + Sbjct: 1 MSIFFHFISSIYLKNFFILFFALVGFYCGIDLLLNFKDLPASANLILLYVLFVGF---SA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRIT-LIKPVLFLAILLSIFLFISEN 119 + + P +M RN E + + G S+ +I P L+ LL F+++ N Sbjct: 58 VTYILPISLIFALVLSFLTMIRNNEFVSLYALGLSKNRVIIYPFLW--ALLFCFIYVGLN 115 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + + + ++F + +++ ++ + + + + I + Sbjct: 116 F---TSFAYANEYKRSILKNGVLNKKSSDIFLKFNEE-FVYVKSLD-EGVAKELKIFSLK 170 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEV 208 D + A+ + + + +L +G + Sbjct: 171 DGNLSHLIQAKRALFNEN--SWLLEEGNI 197 >gi|213857515|ref|ZP_03384486.1| putative permease [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 121 Score = 58.0 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 48/117 (41%) Query: 9 LRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFC 68 +R +S L ++ I + ++++ + N++L + G +P + ++ P Sbjct: 1 MRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLS 60 Query: 69 FAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 + L + +E+ ++ G S+ L+K + LA+ I ++ P Sbjct: 61 LFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMVLALFTGILAAVNVMWAGPWS 117 >gi|188997596|ref|YP_001931847.1| permease YjgP/YjgQ family protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188932663|gb|ACD67293.1| permease YjgP/YjgQ family protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 356 Score = 58.0 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 51/364 (14%), Positives = 138/364 (37%), Gaps = 20/364 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + YI + + L+ ++ +I++++ + + T + L +P Sbjct: 1 MRILDAYIYKKLFVYLLIIFPSFSIVSALIELIEILKK--AKTIEFSTLTLYILTKLPEN 58 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + + ++ E+ + G S + ++ +IL+ I I+ Sbjct: 59 AYYIIPISLIVASFMFINDSIKSREIYPVILNGISLNYISIRIIIFSILVVILQVINLET 118 Query: 121 IEPKCRSTIKQLSAKAQL---ALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD 177 + PK + L K + + ++ ++ ++ ++ ++ N+ + I Sbjct: 119 VMPKTNQIYQTLYLKLKNQQEDEKVKGIAYKMWLKIGENQFLYFDFFDLNSKVGKKLIFI 178 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKS--YTLQTESANS 235 S D + + IY ++ + I +++G + + + + +I + KF + + N Sbjct: 179 SFDKEFNPIYRLEAEDFKVSLDKIEVSNGRLIKINSLD-NIIVEKFDKKILDINIDVENI 237 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 I+L ++S L + Y E + S+F+++L + P + + + Sbjct: 238 KKIILAKKPVSISELYKIASISQAYGYESY-YFWSKFYEKLATVIAPFVLTVFILGFI-- 294 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIE---QNPYYIPILYLFLFCISSIFLL 352 S ++ +W + +I + PY+ + +F + ++L Sbjct: 295 ------WTNNKLYITSGFLATVFYWYGTSLISAVAEVGNIPYFSIFFFDVVFLVIGFYML 348 Query: 353 MIKK 356 KK Sbjct: 349 NSKK 352 >gi|296120596|ref|YP_003628374.1| permease YjgP/YjgQ family protein [Planctomyces limnophilus DSM 3776] gi|296012936|gb|ADG66175.1| permease YjgP/YjgQ family protein [Planctomyces limnophilus DSM 3776] Length = 373 Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 60/382 (15%), Positives = 128/382 (33%), Gaps = 42/382 (10%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTES------LNILLKISG 54 M +F+ Y+L+ F + + + I +L+ ++ + +S L + G Sbjct: 1 MWTFDQYLLKNFFYVFFVCFVAAFGLVVTIDLLENLDEFMLNNQSGGALSLLVSIGTYYG 60 Query: 55 YLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFL 114 Y L + VL R+ EL + G +++ ++ +L++ L Sbjct: 61 YQAIFFLDRGGASLMVIAVMVVLVLFQRSGELHPMLAAGVPMYRVLRALMIGPVLVTAVL 120 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT----- 169 ++ ++ P A A ++ +++ +Y +K + N Sbjct: 121 VANQELVVP----------VIAHAAHGGRGIQTGEGGQVEP-IYDYSTKISINGEKVSLA 169 Query: 170 ---LQG--------IFIVDSRDTQTHKIYYAQSGSIDLDRQAII--LNDGEVHRKSPISK 216 L+G + + D + + ++ D I E +P + Sbjct: 170 DSQLEGAQFVLPAPLIVHDLTIIRGTTAIFRKAAGQRPDGWVIFGAAPQFEELALTPRGQ 229 Query: 217 DISIMKFKSYTLQTESANSSTIVLKAND----QNLSFLLNPNPNNPNYRPELLETYRSEF 272 +I +S L S S + K + S LL N Y P ++ + ++ Sbjct: 230 EIVRKVGRSGELFIASPVSCDQLFKRKSSSNYLSTSELLGR-IRNEAYGPLAVQKFVTQV 288 Query: 273 HKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN 332 H RLTQ L +I L+S+ +R ++ I FG+ +Y+ Sbjct: 289 HGRLTQPLINLIAVLLSLPLLVRRESAGLVMDSGVCAVAQGILFGMMQLSAYL--STSGI 346 Query: 333 PYYIPILYLFLFCISSIFLLMI 354 + +F ++ Sbjct: 347 IAADLAAWFPVFIGGAMAAWTR 368 >gi|152990135|ref|YP_001355857.1| hypothetical protein NIS_0386 [Nitratiruptor sp. SB155-2] gi|151421996|dbj|BAF69500.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2] Length = 343 Score = 57.7 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 59/333 (17%), Positives = 123/333 (36%), Gaps = 25/333 (7%) Query: 32 ILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDN 91 L + S S N+ + Y + ++ P + + R+ EL+ I Sbjct: 27 SLDYFQVFKSLPASANLQILYLYYKSLNAIDLLFPITLIFALIALKNRLIRSNELVAIYA 86 Query: 92 TGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFF 151 G S+ ++ PV ++LL+I + + + + + S ++LFF Sbjct: 87 LGYSKRGVVMPVFLTSLLLTILYLFLHL----TSFAYADEYANNIKKYQSLSSATKDLFF 142 Query: 152 RLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRK 211 + ++D Y N QGI + + + + KI +AQS + +++ L+D + Sbjct: 143 KYNNDYVFFEKLYPLNKRAQGIKVYELENQKLQKIIFAQSATFQ--KRSWHLSDATIVEV 200 Query: 212 SPI-----SKDISIM-KFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELL 265 S D+SI+ +K L + S+I L + + L + N + + Sbjct: 201 SDGKLIERKADLSILQNYKPKILDSVYEGKSSITLIDALEAIKLLKQQSLNVDRIKAII- 259 Query: 266 ETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYI 325 Q LFP + I+ + + ++ +++ + WGF + Sbjct: 260 ----------FYQLLFPFFAPFLMIIIYYFVPVTARITNLNLFLFGATVTSLIVWGFLFT 309 Query: 326 IHKIEQNPYY--IPILYLFLFCISSIFLLMIKK 356 + K+ N + + + I L + KK Sbjct: 310 LVKLAFNGSLDAWYAIVFPISLLLVIALYLYKK 342 >gi|119383652|ref|YP_914708.1| permease YjgP/YjgQ family protein [Paracoccus denitrificans PD1222] gi|119373419|gb|ABL69012.1| permease YjgP/YjgQ family protein [Paracoccus denitrificans PD1222] Length = 373 Score = 57.7 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 70/215 (32%), Gaps = 16/215 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R R +M I ++I I+++I S L+ +S I Sbjct: 2 ILSTYVARRFLRMLVMIAAIFGAILFLIDIVEQIRRFSDENIGLSGAAGLSLLNITASFY 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + + +++R++EL+ I +G S I ++ A L + N + Sbjct: 62 SILPLITVLAGIALFLNLSRSSELVAIRASGRSGIRVLAAPAVTAALAGMLAVAVLNPVV 121 Query: 123 PKCRSTIKQLSAKAQLA--------------LTFSYLEENLFFRLDDDLYIKISKYNPN- 167 A+ + + I+ S+ +P+ Sbjct: 122 AATTKRYDDAVAQMRSGGGQTVSVGDNAVWLRQALPTRNGNGDETSGQVVIRASRASPDA 181 Query: 168 NTLQGI-FIVDSRDTQTHKIYYAQSGSIDLDRQAI 201 TL F+V + DT + A + + + Sbjct: 182 TTLYDATFMVFAPDTGPTRRIDAATARLTQGAWEL 216 >gi|289678195|ref|ZP_06499085.1| permease YjgP/YjgQ [Pseudomonas syringae pv. syringae FF5] Length = 95 Score = 57.3 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 13/90 (14%), Positives = 34/90 (37%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ R + + ++ + ++ + +S +L I G+ +P L ++ Sbjct: 5 RYLSREVLLTLSAVSAVLLVFIMSGRFIKYLAQAASGALDPGVLFLIMGFRLPGFLQVIL 64 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTS 95 P + + +E+ ++ TG S Sbjct: 65 PLGLFLGILMAYGRLYLESEMTVLAATGMS 94 >gi|195952581|ref|YP_002120871.1| permease-like [Hydrogenobaculum sp. Y04AAS1] gi|195932193|gb|ACG56893.1| permease-like [Hydrogenobaculum sp. Y04AAS1] Length = 353 Score = 57.3 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 60/358 (16%), Positives = 130/358 (36%), Gaps = 19/358 (5%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 +I + + + L I+ + ++ QI ++ +S IL + +P VL Sbjct: 4 RFITKRFLFTIFLVYLSILALFFIYQISNFF--ITYHMKSPKILFQTILNFLPIVLFYTA 61 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 ++ + + R L+ + G + KP + +++L+S + P Sbjct: 62 TINVSISVFVLSHYLKRIKMFLVPQSFGIPISHIFKPFIIVSLLISFGNLMLNEFFIPNA 121 Query: 126 RSTIKQLSAKAQLA-LTFSYLEENLFFRLDDD---LYIKISKYNPNNTLQGIFIVDSRDT 181 +K + + + NL+ + + +I S N I I++ ++ Sbjct: 122 TKELKYIEHVYKKNQKYELGIARNLWIAKEKNNEKTFIGTSLATSNGLFYNIKIINVKNN 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE--SANSSTIV 239 + + I A+ + + L G SP + F++ L+TE + + + Sbjct: 182 KFNYIIKAKKAIVKNG--YMDLEQGIETSFSP----FREIHFQTLHLKTEINPKDLNLWI 235 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 ++Q+L+ L+ + Y S F +L P + I+ K Sbjct: 236 KTPDEQSLTELVKTAIVM-RKEGLNMFPYISTFIFKLEFSFLPFLMVCIASFYIAKSQNT 294 Query: 300 RQRKKIHPIFISLSISFGVFWGFSY-IIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 K SL FG+ Y + KI NP + ++Y+F+ + + I++ Sbjct: 295 IDWYKAFLWHASL---FGIGIVIPYSLSSKINMNPLFFVVIYVFMSFYALKRVFDIQR 349 >gi|32266995|ref|NP_861027.1| hypothetical protein HH1496 [Helicobacter hepaticus ATCC 51449] gi|32263047|gb|AAP78093.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449] Length = 359 Score = 56.9 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 61/354 (17%), Positives = 118/354 (33%), Gaps = 34/354 (9%) Query: 16 FLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTN 75 F + L + I +L+ ++ + S N+L+ Y L P + + Sbjct: 14 FFIIFLGLEGFFLAIDMLKYVDELPD---SANLLILFLFYNGIFALTYTLPISLVLCSIL 70 Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAK 135 + ++++L + G S+ ++ P+L ++ + + + + + Sbjct: 71 FYMAFLKSSQLTALMALGYSKRQILAPLLVISSVFIGGFIGLNTTSFAYAKEYAESIIYQ 130 Query: 136 AQLALTFSYLEENLFFRLDDDLYIKISKYNP----NNTLQGIFIVDSRDTQTHKIY-YAQ 190 ENL + D+ YI I K P +GI + K Y AQ Sbjct: 131 QNTQNA----RENLLLK-SDNQYIFIRKLYPLLNEQARAEGIKVFTLDGEHKLKNYHEAQ 185 Query: 191 SGSIDLDRQAII----------LNDGEVHRKSPISKDISIMK-FKSYTLQTESANSSTIV 239 + + + L GE K S +I I+K F S L+T + + T Sbjct: 186 EAFFENNVWILKNVKSLEIASSLTLGEKALKITTSGEIEILKDFSSKVLETIAQDKPTAS 245 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + +L N ++ + RS + L F + I+I++ +L Sbjct: 246 VIDAIASLRIAHKQNVSS--------DKIRSILYALLVIPFFVPLC--IAIISYYIPSLP 295 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 R F+ + + V+ F + Y I L I + L Sbjct: 296 RYGNLTFISFVCIIGALAVWGLFFSLSQLSVAGLIYPEIGLLLPMGILFVVFLW 349 >gi|326561252|gb|EGE11611.1| putative ABC transporter permease protein YjgP/YjgQ [Moraxella catarrhalis 46P47B1] Length = 120 Score = 56.1 bits (134), Expect = 9e-06, Method: Composition-based stats. Identities = 18/117 (15%), Positives = 42/117 (35%), Gaps = 1/117 (0%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R + + + + + V L ++ + S T +L L Y P L Sbjct: 5 ILPKYVIRSALLAMAGAVVGLWLVQMVFAYLAELDNI-SETYTLTDALLFILYRSPYFLV 63 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 P + L + ++EL+++ G S ++ + A++ + Sbjct: 64 QFIPTGTLLGAVIGLGLLANHSELIVMRAAGMSIYRIVSWAMLPAVIFVAISLGVNH 120 >gi|289668602|ref|ZP_06489677.1| YjgP/YjgQ family permease [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 212 Score = 55.4 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 23/153 (15%), Positives = 49/153 (32%), Gaps = 17/153 (11%) Query: 129 IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSRDTQTHKIY 187 + + A ++ + LE F L + + + + L +F+ + + Sbjct: 2 AEAMLEDANRSVLMAGLESGQFTPLSGGGVVYMQTISADGKGLGKVFMQ-RQQNDRINVV 60 Query: 188 YAQSGSI---DLDRQAIILNDGEVHRKSPISK--DISIMKFKSYTLQTESANSSTIVLKA 242 A G++ + + L+DG D +MKF S + Sbjct: 61 TADRGAMFFEGKTDRYLRLDDGYRTEGPAGGATLDYRLMKFASSDIALPDRTRVHDANDP 120 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKR 275 + LL+ + T R++ H+R Sbjct: 121 EVMWTTQLLS----------DERPTARAQLHER 143 >gi|153951775|ref|YP_001398642.1| hypothetical protein JJD26997_1652 [Campylobacter jejuni subsp. doylei 269.97] gi|152939221|gb|ABS43962.1| putative membrane protein [Campylobacter jejuni subsp. doylei 269.97] Length = 352 Score = 55.4 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 52/354 (14%), Positives = 104/354 (29%), Gaps = 19/354 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F +I ++F + ++ I +L + + + + + + Sbjct: 1 MWIFFRFISGIYLKNFFIIFFSLLGFYCGIDLLLNFKDLPKAANLDLLYVMFLSF---SA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P V P L SM R E + G SR +I A+ Sbjct: 58 VPYVLPISLIFALVVSLISMIRANEFVSFYALGLSRNYVILFPFLWALFFCCIYIGLNFT 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 + + + F ++ ++ ISK N N+ Q I I + Sbjct: 118 SFAYANDYKRNIL-----KNGTIMNQSGEVFLKFNNNFVYISKINNGQNSAQNIKIFNIN 172 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEV----HRKSPISKDISIMKFKSY-TLQTESAN 234 D A++ + ++ IL DG + + + I F +L+ Sbjct: 173 DFNLSSFVSAKNAHF--EGESWILRDGNIALLPKNYELANDGLKIQDFSELKSLEGFKPK 230 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 V +D ++S L + + + + +K + F LI Sbjct: 231 IIEGVASNSDYSISDALE-SFELFKAQNVNTDALKINLYKFIFTPFFAPFLMLIMYYFF- 288 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 + R FI+ + V+ + E + I + I Sbjct: 289 -PVIARFFNLAFVTFIAFVVILMVWGVLFLLTRLSENSVIASEIGIVVPIIILG 341 >gi|260891451|ref|ZP_05902714.1| hypothetical protein GCWU000323_02662 [Leptotrichia hofstadii F0254] gi|260858834|gb|EEX73334.1| hypothetical protein GCWU000323_02662 [Leptotrichia hofstadii F0254] Length = 222 Score = 55.0 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 40/221 (18%), Positives = 79/221 (35%), Gaps = 12/221 (5%) Query: 146 EENLF-FRLDDDLYIKISKYNPNN-TLQGIFIVDSRDTQ-THKIYYAQSGSIDLDRQAII 202 EE +F + I + N T + I++ R ++ A++ D + Sbjct: 3 EEKVFLTNEEKGFGFYIDEVNNEKATAKNFLIINKRGNNPYPIVFLAENAKFDPGIIRLK 62 Query: 203 LNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN-DQNLSFL---LNPNPNNP 258 G K S+ ++ + + + T + V K+ + N+ L N NP Sbjct: 63 KVKGYAFDKDGNSQVSALYQEQEIPITTFFRENKKEVKKSRKEMNIKELNEFYKQNIKNP 122 Query: 259 NYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGV 318 + E + E ++RL + P + + R+ + ISL + FG Sbjct: 123 EEK-ETALKAQVEIYQRL---IGPFASTFLCWLGVLLSVGHRRSGRGISFGISLIVIFGY 178 Query: 319 FWGFSYI-IHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 SY I ++ N +++ F + + + KKY Sbjct: 179 IGMASYAKIMVLKNNVPANIAMWVPNFVLFIMCIYFSIKKY 219 >gi|297170536|gb|ADI21564.1| hypothetical protein [uncultured verrucomicrobium HF0070_35E03] Length = 324 Score = 55.0 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 47/335 (14%), Positives = 100/335 (29%), Gaps = 58/335 (17%) Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M PF F + ++ + E+L + G + L+ V+ L+S+ S Sbjct: 1 MALPFGFVVSVVFLIGKWVADGEILAYRSLGGDVLALLWVVMLFGTLISVISTYSSLEWS 60 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP---------------- 166 P RS QL + T LEE R + + + Sbjct: 61 PVNRSKFDQLKNEILWTQTNLLLEE----RGEIGFAFHSDEQSKTSEKLNALAGERIRGA 116 Query: 167 --------NNTLQGIFIVDSRDTQTH--KIYYAQSGSIDLDRQAIILNDGEV-------- 208 ++ + + IV S + +A+ ++ + GE+ Sbjct: 117 SLSVFDASDDLWKNLRIVLSGGPNEEVLVVIHARKAFVEKRKD-----KGELVLDLLDVD 171 Query: 209 ----HRKSPISKDISIMKFKSYTLQT-ESANSSTIVLKANDQNLSFLLNP--NPNNPNYR 261 + + F+ + N + LL+ +P +R Sbjct: 172 LEYGFSTGEKAAGGQFLSFERWKEPIVFQINQEARPKGVKRMGFTELLSAIERSEDPQFR 231 Query: 262 PELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWG 321 E + K L+ P + I+ L + + + + + L+I G + Sbjct: 232 NEGISLLS----KNLSFGTSPF---FLGILLVPIGILAGKSESLINLSLGLAIGLGFYAM 284 Query: 322 FSYIIHKIEQ-NPYYIPILYLFLFCISSIFLLMIK 355 + + + + + + C +LMI+ Sbjct: 285 GLLLSGLMGKHDLGFAGWWAPNIVCFLLGMILMIR 319 >gi|205356037|ref|ZP_03222805.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni CG8421] gi|205346161|gb|EDZ32796.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni CG8421] Length = 352 Score = 55.0 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 51/354 (14%), Positives = 107/354 (30%), Gaps = 19/354 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F +I ++F + ++ I +L + + + + + + Sbjct: 1 MWIFFRFISGIYLKNFFIIFFSLLGFYCGIDLLLNFKDLPKAANLDLLYVMFLSF---SA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P V P L SM R E + + G SR +I A+ Sbjct: 58 VPYVLPISLIFALVVSLISMIRANEFVSLYALGLSRNYVILFPFLWALFFCCIYIGLNFT 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 + + + F ++ ++ ISK N N+ Q I I + Sbjct: 118 SFAYANDYKRNIL-----KNGTIMNQSGEVFLKFNNNFVYISKINNGQNSAQNIKIFNIN 172 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEV----HRKSPISKDISIMKFKSY-TLQTESAN 234 D A++ + ++ IL DG + + + I F +L+ Sbjct: 173 DLNLSSFVSAKNAHF--EGESWILRDGNITLLPKNYELANDGLKIQDFSELKSLEGFKPK 230 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 V +D ++S L + + +T + +K + F LI Sbjct: 231 IIEGVASNSDYSISDALE-SFELFKAQNVNTDTLKINLYKFVFTPFFAPFLMLIMYYFF- 288 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 + R F++ ++ ++ + E + I + I Sbjct: 289 -PVIARFFNLAIVTFVAFVVTLMIWGVLFLLTRLSENSVIASEIGIVVPIIILG 341 >gi|315057734|gb|ADT72063.1| Permease YjgP/YjgQ [Campylobacter jejuni subsp. jejuni S3] Length = 352 Score = 55.0 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 51/354 (14%), Positives = 106/354 (29%), Gaps = 19/354 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F +I ++F + ++ I +L + + + + + + Sbjct: 1 MWIFFRFISGIYLKNFFIIFFSLLGFYCGIDLLLNFKDLPKAANLDLLYVMFLSF---SA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P V P L SM R E + + G SR +I A+ Sbjct: 58 VPYVLPISLIFALVVSLISMIRANEFVSLYALGLSRNYVILFPFLWALFFCCIYIGLNFT 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 + + + F ++ ++ ISK N N+ Q I I + Sbjct: 118 SFAYANDYKRNIL-----KNGTIMNQSGEVFLKFNNNFVYISKINNGQNSAQNIKIFNIN 172 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEV----HRKSPISKDISIMKFKSY-TLQTESAN 234 D A++ + ++ IL DG + + + I F +L+ Sbjct: 173 DLNLSSFVSAKNAYF--EGESWILRDGNITLLPKNYELANDGLKIQDFSELKSLEGFKPK 230 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 V +D ++S L + + + + +K + F LI Sbjct: 231 IIEGVASNSDYSISDALE-SFELFKAQNVNTDALKINLYKFVFTPFFAPFLMLIMYYFF- 288 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 + R FI+ ++ ++ + E + I + I Sbjct: 289 -PVIARFFNLAFVTFIAFVVTLMIWGVLFLLTRLSENSVIASEIGIVVPIIILG 341 >gi|157414610|ref|YP_001481866.1| hypothetical protein C8J_0290 [Campylobacter jejuni subsp. jejuni 81116] gi|157385574|gb|ABV51889.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni 81116] gi|315931610|gb|EFV10576.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 327] Length = 352 Score = 55.0 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 51/354 (14%), Positives = 106/354 (29%), Gaps = 19/354 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F +I ++F + ++ I +L + + + + + + Sbjct: 1 MWIFFRFISGIYLKNFFIIFFSLLGFYCGIDLLLNFKDLPKAANLDLLYVMFLSF---SA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P V P L SM R E + + G SR +I A+ Sbjct: 58 VPYVLPISLIFALVVSLISMIRANEFVSLYALGLSRNYVILFPFLWALFFCCIYIGLNFT 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 + + + F ++ ++ ISK N N+ Q I I + Sbjct: 118 SFAYANDYKRNIL-----KNGTIMNQSGEVFLKFNNNFVYISKINNGQNSAQNIKIFNIN 172 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEV----HRKSPISKDISIMKFKSY-TLQTESAN 234 D A++ + ++ IL DG + + + I F +L+ Sbjct: 173 DLNLSSFVSAKNAHF--EGESWILRDGNITLLPKNYELANDGLKIQDFSELKSLEGFKPK 230 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 V +D ++S L + + + + +K + F LI Sbjct: 231 IIEGVASNSDYSISDALE-SFELFKAQNVNTDALKINLYKFVFTPFFAPFLMLIMYYFF- 288 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 + R FI+ ++ ++ + E + I + I Sbjct: 289 -PVIARFFNLAFVTFIAFVVTLMIWGVLFLLTRLSENSVIASEIGIVVPIIILG 341 >gi|57168449|ref|ZP_00367583.1| probable integral membrane protein Cj0313 [Campylobacter coli RM2228] gi|57020257|gb|EAL56931.1| probable integral membrane protein Cj0313 [Campylobacter coli RM2228] Length = 352 Score = 54.6 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 57/357 (15%), Positives = 123/357 (34%), Gaps = 20/357 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F +I ++F + L ++ I +L N + + + + + + Sbjct: 1 MWIFFRFISGIYLKNFFIIFLSLLGFYCGIDLLLNFNDLPDAANLSLLYVIFLAF---SA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P L SM R E + + G S+ +I A+ Sbjct: 58 VTYVLPVSLIFALVLSLVSMIRANEFVSLYALGLSKNLVIIFPFLWALFFCFVYVGLNFT 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 + + + F ++ +I ISK N T Q I I + + Sbjct: 118 PFAYANDYKRNIL-----KNGTMLKQSGEVFLKFNNEFIYISKVNNGQSTAQNIKIFNIK 172 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEV----HRKSPISKDISIMKFKSY-TLQTESAN 234 D A+SG +++ IL +G + +K ++I +FK TL+ Sbjct: 173 DLNLSSFIEAKSGIF--EKKNWILKEGNLTLLPKEYELGNKGLNISEFKELNTLEGFKPK 230 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 V +D ++ +L + + +E+ + +K + F LI Sbjct: 231 IIEGVASDSDYSILDILE-SLELFKTQNISIESLKISLYKLVFMPFFAPFLMLIMYYFFP 289 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 ++ + + + + + WG +++ ++ +N + L + + + IFL Sbjct: 290 ---VIARFFNLAFVAFVAFVVTLLTWGMLFLLSRLSENGVILSELGIVMPIVLLIFL 343 >gi|289668601|ref|ZP_06489676.1| YjgP/YjgQ family permease [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 129 Score = 54.6 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 22/127 (17%), Positives = 55/127 (43%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L +SFL + + ++ ++ ++ + ++ +LL G Sbjct: 1 MPKLDRYLLSDFTQSFLATLIVLLVVSVGGVLVDILGNIADGRIPARLLLSQVGLQFVAY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP++ P + L + R++E+ +I G +++P+L L + + + + + Sbjct: 61 LPIILPLALMLGLLLALARLYRDSEMAVITAIGVGPKRMLRPMLMLVVPVVVVIGLCSLW 120 Query: 121 IEPKCRS 127 + P R Sbjct: 121 LGPWARR 127 >gi|283955738|ref|ZP_06373229.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni 1336] gi|283792693|gb|EFC31471.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni 1336] Length = 352 Score = 54.6 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 51/354 (14%), Positives = 106/354 (29%), Gaps = 19/354 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F +I ++F + ++ I +L + + + + + + Sbjct: 1 MWIFFRFISGIYLKNFFIIFFSLLGFYCGIDLLLNFKDLPKAANLDLLYVMFLSF---SA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P V P L SM R E + + G SR +I A+ Sbjct: 58 VPYVLPISLIFALVVSLISMIRANEFVSLYALGLSRNYVILFPFLWALFFCCVYIGLNFT 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 + + + F ++ ++ ISK N N+ Q I I + Sbjct: 118 SFAYANDYKRNIL-----KNGTIMNQSGEVFLKFNNNFVYISKINNGQNSAQNIKIFNIN 172 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEV----HRKSPISKDISIMKFKSY-TLQTESAN 234 D A++ + ++ IL DG + + + I F +L+ Sbjct: 173 DLNLSSFVSAKNAHF--EGESWILRDGNITLLPKNYELANDGLKIQDFSELKSLEGFKPK 230 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 V +D ++S L + + + + +K + F LI Sbjct: 231 IIEGVASNSDYSISDALE-SFELFKAQNVNTDALKINLYKFVFTPFFAPFLMLIMYYFF- 288 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 + R FI+ ++ ++ + E + I + I Sbjct: 289 -PVIARFFNLAIVTFIAFVVTLMIWGILFLLTRLSENSVIASEIGIVVPIIILG 341 >gi|114768925|ref|ZP_01446551.1| permease, YjgP/YjgQ family protein [alpha proteobacterium HTCC2255] gi|114549842|gb|EAU52723.1| permease, YjgP/YjgQ family protein [alpha proteobacterium HTCC2255] Length = 366 Score = 54.6 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 51/369 (13%), Positives = 128/369 (34%), Gaps = 24/369 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + +Y + SF+ L IV + + L +N ++ + L +S T L Sbjct: 2 TLAIYFGKRYLISFIRVFLSIVLLVLLFDFLTNLNRLNGIEAQIWNALILSLLRTTTYLS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + S++R+ E +++ +G S + + PV+ A L + + + Sbjct: 62 LAMPLIIMLSALAFSVSLSRSNEFIVLRASGVSALKGLFPVISSAFFLGLISIFMLDPLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIK------------ISKYNPNNTL 170 K K + L D+ +++ ++ N L Sbjct: 122 GKMIGYYNIKLDKLRSKEQSQVL------INDNGYWMRQATLNGHQIIKAVNVSNNGQRL 175 Query: 171 QGIFIVDSRDTQ-THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIM--KFKSYT 227 + I + + + ++++S ++ + ++L + + I K+ I K K Sbjct: 176 HQVTIFNYDENGLVTERFFSESAALGNNE--LLLTNAIKWSDTKIKKNPIIANEKIKKLK 233 Query: 228 LQTESANSSTIVLKANDQNLS-FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFG 286 ++TE + + A+ + +S + +N + Y+S+ ++ + ++ Sbjct: 234 IKTEITPTQLLDGYASPETISPWNMNKQIQKVKSSGFSVLKYQSKKMEQYARPFLFIVMV 293 Query: 287 LISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCI 346 ++ V + + R + ++ F F + + + P I L Sbjct: 294 VLGTVFTLQNSRARNVGISVVLAVASGFFLHFFQNFCTTLGRSGEIPLIIATWSPILSIG 353 Query: 347 SSIFLLMIK 355 L + Sbjct: 354 LIAMTLFLH 362 >gi|57242053|ref|ZP_00369993.1| probable integral membrane protein Cj0313 [Campylobacter upsaliensis RM3195] gi|57017245|gb|EAL54026.1| probable integral membrane protein Cj0313 [Campylobacter upsaliensis RM3195] Length = 350 Score = 54.6 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 26/208 (12%), Positives = 70/208 (33%), Gaps = 11/208 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F +I ++F + +V + +L + +S + + + G+ + Sbjct: 1 MSIFFHFISFIYLKNFFILFFALVGFYCGVDLLLNFKDLPASANLILLYVLFVGF---SA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P +M RN E + + G S+ +I A+L Sbjct: 58 VTYILPISLIFALVLSFLTMIRNNEFVSLYALGLSKNRVIIYPFLWALLFCFIYIGLNFT 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + L S + F + +++ ++ + + + + I +D Sbjct: 118 SFAYANEYKRSILKNGVLNKKSSDI----FLKFNEE-FVYVKSLD-EGLAKELKIFSLKD 171 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEV 208 + A+ + + + +L +G + Sbjct: 172 GNLSHLIQAKRALFNEN--SWLLEEGNI 197 >gi|33519520|ref|NP_878352.1| putative inner membrane protein [Candidatus Blochmannia floridanus] gi|33517183|emb|CAD83565.1| putative inner membrane protein; predicted permease [Candidatus Blochmannia floridanus] Length = 360 Score = 54.6 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 46/358 (12%), Positives = 120/358 (33%), Gaps = 8/358 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 E YI + + + M L + ++ +I+++ + T S+ + I Sbjct: 5 NILERYIKKYVLLNIFMIFLIFISLSSIIRLVDELRNFQKQTYSVFEIFFCIFLNIIKDF 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + + L + EL+I+ G S + + V+ +I + + I + Sbjct: 65 ELFLSLSTLLGGVLGLGILELRNELIIMKVFGLSNLQINLSVIKTSIFIVLLYVIYNIWL 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLE-ENLFFRLDDDLYIKISKYNPNNTLQGI-FIVDSR 179 P + + Q + + +NL+ + +I ++ L GI + Sbjct: 125 LPYSQYLLCSHQHYKQYNVYLFPEKNKNLWLMDSGNSFIHVNYMLTTQDLLGINLYHFTE 184 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--ST 237 + Q +I Y + + + ++ + + K SY T + S Sbjct: 185 ERQLKRIIYIEKATYIDNSWSVSNIN---ELEFVDKMQFLNRKILSYEWNTTLTPAILSM 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 I + + ++S L+ + + + Y+ F ++ +F V+ I+++ + Sbjct: 242 ITVNPHFLSISKLIC-CIKYFDVLGQNSKYYQLIFWDKIFSPIFGVMMLTIALLYSYGPF 300 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 ++ + F V I+ + + + L + + + + Sbjct: 301 YKKKISFRLFFGGIIGFVFYVLHQIFEILSIVYNITPIVGSIILIMLFLMINTIFLRN 358 >gi|218659050|ref|ZP_03514980.1| putative permease protein [Rhizobium etli IE4771] Length = 272 Score = 54.6 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 38/248 (15%), Positives = 76/248 (30%), Gaps = 26/248 (10%) Query: 55 YLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFL 114 +P L PF VL +NR EL++ G S + P + ++ L + Sbjct: 1 MRLPLNLQQTIPFVALFVGMTVLIGLNRKYELVVTRAAGISVWQFMFPFVAGSLALGVLT 60 Query: 115 FISENIIEPKCRSTI-------KQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN 167 + N + + + +A + A +L + DD+ I N Sbjct: 61 TTALNPLAAWGQRQALLVESDWRGENAVLRKAPQIPWLRQ---ISGRDDVIIGAQTVQEN 117 Query: 168 NT--LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI----SKDISIM 221 T + + I + A + ++ + +G V RK + + Sbjct: 118 GTKLVDAVLIHFDSSGRVIMRQDAATAKLEDGYWQL---NGVVERKPGEIPLRKASVQLR 174 Query: 222 KFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLF 281 + + L N ++ + ++F+ L+Q L Sbjct: 175 T------NLKQDFVQERLTAPETIGFFDLSNRIAAAKSF-GISTKALETQFNSLLSQPLL 227 Query: 282 PVIFGLIS 289 V LI+ Sbjct: 228 LVAMTLIA 235 >gi|57237364|ref|YP_178377.1| hypothetical protein CJE0358 [Campylobacter jejuni RM1221] gi|57166168|gb|AAW34947.1| membrane protein, putative [Campylobacter jejuni RM1221] Length = 352 Score = 54.6 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 50/354 (14%), Positives = 106/354 (29%), Gaps = 19/354 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F +I ++F + ++ I +L + + + + + + Sbjct: 1 MWIFFRFISGIYLKNFFIIFFSLLGFYCGIDLLLNFKDLPKAANLDLLYVMFLSF---SA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P V P L SM R E + + G SR +I A+ Sbjct: 58 VPYVLPISLIFALVVSLISMIRANEFVSLYALGLSRNYVILFPFLWALFFCCIYIGLNFT 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 + + + F ++ ++ ISK N N+ Q I I + Sbjct: 118 SFAYANDYKRNIL-----KNGTIMNQSGEVFLKFNNNFVYISKINNGQNSAQNIKIFNIN 172 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEV----HRKSPISKDISIMKFKSY-TLQTESAN 234 D A++ + ++ IL DG + + + I F +L+ Sbjct: 173 DLNLSSFVSAKNAYF--EGESWILRDGNITLLPKNYELANDGLKIQDFSELKSLEGFKPK 230 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 V +D ++S L + + + + +K + F LI Sbjct: 231 IIEGVASNSDYSISDALE-SFELFKAQNVNTDALKINLYKFVFTPFFAPFLMLIMYYFF- 288 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 + R F++ ++ ++ + E + I + I Sbjct: 289 -PVIARFFNLAIVTFMAFVVTLMIWGVLFLLTRLSENSVIASEIGIVVPIIILG 341 >gi|262277385|ref|ZP_06055178.1| putative permease, YjgP/YjgQ family [alpha proteobacterium HIMB114] gi|262224488|gb|EEY74947.1| putative permease, YjgP/YjgQ family [alpha proteobacterium HIMB114] Length = 365 Score = 54.2 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 54/364 (14%), Positives = 122/364 (33%), Gaps = 21/364 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLI---P 58 ++ Y+++ S ++ + + + +Q I S N LL++ P Sbjct: 7 RTLIKYLIKEFSFSLMIFTVIFSSLIILTTFIQEITFFQEKEVSDNFLLRMLLLTFIKSP 66 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 T++ + F F +N E++ I +G S + + L I + I Sbjct: 67 TLIINSSSFIFLFAGIFFYVKFMKNNEIVPISLSGFSMNFITLVPGIFSFFLGIVIIIIF 126 Query: 119 NIIEPKCRSTIKQLSAK-AQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-----TLQG 172 + I + + + ++ ++ + + I I + + + L+ Sbjct: 127 SPISSELSKYYESIKKNYSKNDNLIVMSATGIWIKEKKNDNIYIIRADKLSGNDFAKLKN 186 Query: 173 IFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL--QT 230 I I + + +G I + I + + D+ + SYT + Sbjct: 187 ISIYTFSMNKFKERINGDNGIIVKNNLKIT--------PANLVSDVRNISLNSYTYISKI 238 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 N + A+ ++ + N N+ E +FHK L+ ++S Sbjct: 239 NLENIKNYFVNADTFSIWSVKNAL-NDVRKMGYFGEEIIIKFHKYLSLPFLLFAMIVLST 297 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSI 349 K + I I F+ S + K + P + + + + L + SI Sbjct: 298 FFTIKMNFTFNNFIYAFLGILTGIIVYFFYDLSIAVGKSGKLPLILSVWMPVILINVFSI 357 Query: 350 FLLM 353 ++L+ Sbjct: 358 YILI 361 >gi|121612521|ref|YP_001000023.1| hypothetical protein CJJ81176_0335 [Campylobacter jejuni subsp. jejuni 81-176] gi|87250256|gb|EAQ73214.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 81-176] Length = 352 Score = 54.2 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 67/209 (32%), Gaps = 11/209 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F +I ++F + ++ I +L + + + + + + Sbjct: 1 MWIFFRFISGIYLKNFFIIFFSLLGFYCGIDLLLNFKDLPKAANLDLLYVMFLSF---SA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P V P L SM R E + + G SR +I A+ Sbjct: 58 VPYVLPISLIFALVVSLISMIRANEFVSLYALGLSRNYVILFPFLWALFFCCIYIGLNFT 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 + + + F ++ ++ ISK N N+ Q I I + Sbjct: 118 SFAYANDYKRNIL-----KNGTIMNQSGEVFLKFNNNFVYISKINNGQNSAQNIKIFNIN 172 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEV 208 D A++ + ++ IL DG + Sbjct: 173 DLNLSSFVSAKNAHF--EGESWILRDGNI 199 >gi|288818803|ref|YP_003433151.1| hypothetical protein HTH_1500 [Hydrogenobacter thermophilus TK-6] gi|288788203|dbj|BAI69950.1| hypothetical protein HTH_1500 [Hydrogenobacter thermophilus TK-6] gi|308752389|gb|ADO45872.1| permease YjgP/YjgQ family protein [Hydrogenobacter thermophilus TK-6] Length = 285 Score = 54.2 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 35/220 (15%), Positives = 76/220 (34%), Gaps = 13/220 (5%) Query: 27 AWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTEL 86 + Q+L+ ++ S L L L P + ++ V + + +L Sbjct: 25 FMLFQLLRIDKILFS--LPLEETLPFLMLWTSYSLFYFMPTSMFISSSVVFFELKDSKKL 82 Query: 87 LIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLE 146 +I++ G + V + + I L ++ + S +++ + Sbjct: 83 HVIESFGIAPYLAYSRVFVRCMPIFISLIAISFMLREEDVSFMRRYLTYKYYMNMVYSVP 142 Query: 147 ENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDG 206 E FF L D + +S+ N N + +F + + A+ +D D AI+ DG Sbjct: 143 EKTFFTLGD-MTFYVSERN-GNDVSDVFF-----KKGESLVIAKGAHLDSD--AIVFTDG 193 Query: 207 EVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 + + + F Y + E S + ++ Sbjct: 194 SI--LVKEGEKFYLTAFSQYRISLEKFVSVERQQRNLKRD 231 >gi|86151428|ref|ZP_01069643.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 260.94] gi|86153749|ref|ZP_01071952.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|315123881|ref|YP_004065885.1| hypothetical protein ICDCCJ07001_285 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85841775|gb|EAQ59022.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 260.94] gi|85842710|gb|EAQ59922.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|307747250|gb|ADN90520.1| Putative membrane protein [Campylobacter jejuni subsp. jejuni M1] gi|315017603|gb|ADT65696.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 352 Score = 54.2 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 50/354 (14%), Positives = 106/354 (29%), Gaps = 19/354 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F +I ++F + ++ I +L + + + + + + Sbjct: 1 MWIFFRFISGIYLKNFFIIFFSLLGFYCGIDLLLNFKDLPKAANLDLLYVMFLSF---SA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P V P L SM R E + + G SR +I A+ Sbjct: 58 VPYVLPISLIFALVVSLISMIRANEFVSLYALGLSRNYVILFPFLWALFFCCIYIGLNFT 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 + + + F ++ ++ ISK N N+ Q I I + Sbjct: 118 SFAYANDYKRNIL-----KNGTIMNQSGEVFLKFNNNFVYISKINNGQNSAQNIKIFNIN 172 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEV----HRKSPISKDISIMKFKSY-TLQTESAN 234 D A++ + ++ IL DG + + + + F +L+ Sbjct: 173 DLNLSSFVSAKNAHF--EGESWILRDGNITLLPKNYELANDGLKLQDFSELKSLEGFKPK 230 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 V +D ++S L + + + + +K + F LI Sbjct: 231 IIEGVASNSDYSISDALE-SFELFKAQNVNTDALKINLYKFVFTPFFAPFLMLIMYYFF- 288 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 + R FI+ ++ ++ + E + I + I Sbjct: 289 -PVIARFFNLAFVTFIAFVVTLMIWGVLFLLTRLSENSVIASEIGIVVPIIILG 341 >gi|167004981|ref|ZP_02270739.1| hypothetical protein Cjejjejuni_01670 [Campylobacter jejuni subsp. jejuni 81-176] Length = 351 Score = 54.2 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 52/354 (14%), Positives = 106/354 (29%), Gaps = 20/354 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y R + + F ++ I +L + + + + + + Sbjct: 1 MDIFSFY-FRDLFKKFFYYIFSLLGFYCGIDLLLNFKDLPKAANLDLLYVMFLSF---SA 56 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P V P L SM R E + + G SR +I A+ Sbjct: 57 VPYVLPISLIFALVVSLISMIRANEFVSLYALGLSRNYVILFPFLWALFFCCIYIGLNFT 116 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 + + + F ++ ++ ISK N N+ Q I I + Sbjct: 117 SFAYANDYKRNIL-----KNGTIMNQSGEVFLKFNNNFVYISKINNGQNSAQNIKIFNIN 171 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEV----HRKSPISKDISIMKFKSY-TLQTESAN 234 D A++ + ++ IL DG + + + I F +L+ Sbjct: 172 DLNLSSFVSAKNAHF--EGESWILRDGNITLLPKNYELANDGLKIQDFSELKSLEGFKPK 229 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 V +D ++S L + + +T + +K + F LI Sbjct: 230 IIEGVASNSDYSISDALE-SFELFKAQNVNTDTLKINLYKFVFTPFFAPFLMLIMYYFF- 287 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 + R F++ ++ ++ + E + I + I Sbjct: 288 -PVIARFFNLAIVTFVTFVVTLMIWGVLFLLTRLSENSVIASEIGIVVPIIILG 340 >gi|86149085|ref|ZP_01067317.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni CF93-6] gi|88597305|ref|ZP_01100540.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 84-25] gi|218561972|ref|YP_002343751.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85840443|gb|EAQ57700.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni CF93-6] gi|88190366|gb|EAQ94340.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 84-25] gi|112359678|emb|CAL34464.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284925585|gb|ADC27937.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni IA3902] gi|315928386|gb|EFV07700.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315930530|gb|EFV09573.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 305] Length = 352 Score = 54.2 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 52/354 (14%), Positives = 107/354 (30%), Gaps = 19/354 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F +I ++F + ++ I +L + + + + + + Sbjct: 1 MWIFFRFISGIYLKNFFIIFFSLLGFYCGIDLLLNFKDLPKAANLDLLYVMFLSF---SA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P V P L SM R E + + G SR +I A+ Sbjct: 58 VPYVLPISLIFALVVSLISMIRANEFVSLYALGLSRNYVILFPFLWALFFCCIYIGLNFT 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 + + + F ++ ++ ISK N N+ Q I I + Sbjct: 118 SFAYANDYKRNIL-----KNGTIMNQSGEVFLKFNNNFVYISKINNGQNSAQNIKIFNIN 172 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEV----HRKSPISKDISIMKFKSY-TLQTESAN 234 D A++ + ++ IL DG + + + I F +L+ Sbjct: 173 DLNLSSFASAKNAHF--EGESWILRDGNITLLPKNYELANDGLKIQDFSELKSLEGFKPK 230 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 V +D ++S L + + +T + +K + F LI Sbjct: 231 IIEGVASNSDYSISDALE-SFELFKAQNVNTDTLKINLYKFVFTPFFAPFLMLIMYYFF- 288 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 + R FI+ ++ ++ + E + I + I Sbjct: 289 -PVIARFFNLAFVTFIAFVVTLMIWGVLFLLTRLSENSVIASEIGIVVPIIILG 341 >gi|322379484|ref|ZP_08053850.1| permease [Helicobacter suis HS1] gi|322380465|ref|ZP_08054664.1| putative permease [Helicobacter suis HS5] gi|321147110|gb|EFX41811.1| putative permease [Helicobacter suis HS5] gi|321148091|gb|EFX42625.1| permease [Helicobacter suis HS1] Length = 355 Score = 54.2 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 55/350 (15%), Positives = 116/350 (33%), Gaps = 34/350 (9%) Query: 17 LMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNV 76 L+ L + F I LQ S+ + + G + P + Sbjct: 16 LIILLALEFFFLGIDSLQYAEKFPSAANLILLFFVYDGL---YAINYTLPISLLLGLVLF 72 Query: 77 LTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKA 136 T+ R+ + + + G S ++KP+L+ ++ + + +++ + Sbjct: 73 YTAFIRSNQYTALLSIGYSIKEILKPMLW----INGLCILIYVGLNATPFVYMQEKAQSI 128 Query: 137 QLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDTQTHKIYYAQSGSID 195 + + ENL + ++D YI K NP Q + I +D Q + A S S + Sbjct: 129 IYKDNTNSISENLLVKYNND-YIYFGKINPLLQNAQNVKIFMLKDNQLNTFAQAPSASFE 187 Query: 196 LDRQAI--ILNDGEVHRKSPISKDISIMK---------FKSYTLQTESANSSTIVLKAND 244 + + K +S+ K F+ L T N + + Sbjct: 188 GKFWVLHSVTLSTLPTPLLLGKKGLSVQKLPLLKTLKGFRPKVLDTIYQNKPAVSITDAF 247 Query: 245 QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKK 304 ++L L + R L + P L +I+ A + + + Sbjct: 248 RSLHVLYRQKADTKKIRGFLYVSI-----------FLPFFVPLTAILIAYYTPNLARYEN 296 Query: 305 IHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP---ILYLFLFCISSIFL 351 + + + + + WG + + K + ++P +L F+ I F Sbjct: 297 LALLSLKFILLSLILWGLFFAMGKFSISGVFLPEVGVLAPFIILIGVSFY 346 >gi|15618903|ref|NP_225189.1| hypothetical protein CPn0995 [Chlamydophila pneumoniae CWL029] gi|15836526|ref|NP_301050.1| hypothetical protein CPj0995 [Chlamydophila pneumoniae J138] gi|16752032|ref|NP_445398.1| hypothetical protein CP0860 [Chlamydophila pneumoniae AR39] gi|33242364|ref|NP_877305.1| hypothetical protein CpB1032 [Chlamydophila pneumoniae TW-183] gi|4377324|gb|AAD19132.1| CT838 hypothetical protein [Chlamydophila pneumoniae CWL029] gi|7189772|gb|AAF38649.1| conserved hypothetical protein [Chlamydophila pneumoniae AR39] gi|8979368|dbj|BAA99202.1| CT838 hypothetical protein [Chlamydophila pneumoniae J138] gi|33236875|gb|AAP98962.1| hypothetical protein CpB1032 [Chlamydophila pneumoniae TW-183] gi|269302795|gb|ACZ32895.1| putative permease, YjgP/YjgQ family [Chlamydophila pneumoniae LPCoLN] Length = 366 Score = 53.8 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 68/370 (18%), Positives = 124/370 (33%), Gaps = 29/370 (7%) Query: 1 MKSFELYILRCI-GRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYL--I 57 M ++ ++L + L ++F A + L + S++ ++ L I YL I Sbjct: 1 MLIWKRHLLTRFWFALTSLLVLALIFYASIHHSLHTLKGASTAASGASVKLSILYYLAQI 60 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 + P A+ TT+ L +M E++++ +G S +L+ P+L ++ + L+ + Sbjct: 61 SLKAEFLMPQLVAVATTSTLFAMQNKREIILLQASGLSLKSLMHPLLLSGAVIMMVLYAN 120 Query: 118 ENIIEPKCRSTIKQLSAKAQLALTFSYLEENLF--FRLDDDLYIKISKYNPNN-TLQGIF 174 + P C K K + + E+ L D + S P TL +F Sbjct: 121 FQWLHPICE---KISITKENMDRGTTDKEQGKIPALYLKDQTVLLYSSIEPKTLTLNNVF 177 Query: 175 -IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIM----KFKSYTLQ 229 I D + IY + + I LN + + ++ +F Sbjct: 178 WIKDPK-----TIYTMEKLAFTTLSLPIGLNVTQFFANDSENLELKEFFDMKEFPEIEFN 232 Query: 230 TESANSSTIVLKANDQNLSFLLNPNPNNP------NYRPELLETYRSEFHKRLTQWLFPV 283 S + N LS P N P+ + + ++F+ L L Sbjct: 233 FYENPFSKLFSAGNKNRLSEFFKAIPWNATGLGLSTQVPQRILSLLAQFYYVLISPLAC- 291 Query: 284 IFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 I + A R I L F I +P L + Sbjct: 292 -MAAIILSAYLCLRFSRTPTVTLAYLIPLGTVNIFFVFLKAGIVLASS--SVLPTLPVMA 348 Query: 344 FCISSIFLLM 353 F + +FLL Sbjct: 349 FPLIVLFLLT 358 >gi|239946701|ref|ZP_04698454.1| permease, YjgP/YjgQ family [Rickettsia endosymbiont of Ixodes scapularis] gi|239920977|gb|EER21001.1| permease, YjgP/YjgQ family [Rickettsia endosymbiont of Ixodes scapularis] Length = 362 Score = 53.8 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 66/188 (35%), Gaps = 6/188 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K+ Y+ + + F + ++ + + I + + + ++ Y IP + Sbjct: 4 LKTLSWYLTKLYSKCFFIILFLLIGLLIISNIFDLLQKFKNIYVPFSFFWRLILYKIPYL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V+ L ++ +N EL + ++G ++ + ++L I N Sbjct: 64 LGQVSSLISFTAMLFFLRNLTKNNELTAMLSSGIHIWQVLVIPCIVTLILGIVFMTILNP 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I + L AK LT L E + + L S + N +Q FI + Sbjct: 124 IGTIGLQKYELLEAK----LTKKALSEGIISK--SGLLFFESLNDENQIIQTQFINVAEK 177 Query: 181 TQTHKIYY 188 + Sbjct: 178 KLNNITIL 185 >gi|283955209|ref|ZP_06372710.1| LOW QUALITY PROTEIN: putative integral membrane protein [Campylobacter jejuni subsp. jejuni 414] gi|283793246|gb|EFC32014.1| LOW QUALITY PROTEIN: putative integral membrane protein [Campylobacter jejuni subsp. jejuni 414] Length = 353 Score = 53.4 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 46/289 (15%), Positives = 96/289 (33%), Gaps = 16/289 (5%) Query: 50 LKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAIL 109 L +L + +P V P L SM R E + + G S+ ++ A+ Sbjct: 47 LLYIMFLCFSAVPYVLPISLIFALVVSLISMIRANEFVSLYALGLSKNYVVLFPFLWALF 106 Query: 110 LSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-N 168 + + + F ++ ++ ISK N N Sbjct: 107 FCCIYIGLNFTSFAYANDYKRNIL-----KNGTIMTQSGEVFLKFNNNFVYISKINNGQN 161 Query: 169 TLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEV----HRKSPISKDISIMKFK 224 + Q I I + D+ A++ + ++ IL DG + + + I F Sbjct: 162 SAQNIKIFNINDSNLSSFISAKNAYF--EGESWILRDGNITLLPKNYELANDGLKIKDFS 219 Query: 225 SY-TLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPV 283 +L V +D ++S L + + + R +K + F Sbjct: 220 QLKSLDGFKPKIIEGVASNSDYSISDALE-SFELFRAQNVNTDALRINLYKFIFTPFFLP 278 Query: 284 IFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN 332 F ++ I+ + R FI+ ++ + WG +++ ++ +N Sbjct: 279 HFLML-IMYYFFPIIARFFNLAFVTFIAFVVTLMI-WGVLFLLTRLSEN 325 >gi|305432868|ref|ZP_07402026.1| integral membrane protein [Campylobacter coli JV20] gi|304444022|gb|EFM36677.1| integral membrane protein [Campylobacter coli JV20] Length = 352 Score = 53.4 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 40/230 (17%), Positives = 77/230 (33%), Gaps = 15/230 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F +I ++F + L ++ I +L N + + + + + + Sbjct: 1 MWIFFRFISGIYLKNFFIIFLSLLGFYCGIDLLLNFNDLPDAANLSLLYVIFLAF---SA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P L SM R E + + G S+ +I A+ Sbjct: 58 VTYVLPVSLIFALVLSLVSMIRANEFVSLYALGLSKNLVIIFPFLWALFFCFVYVGLNFT 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 + + + F ++ +I ISK N T Q I I + + Sbjct: 118 PFAYANDYKRNIL-----KNGTMLKQSGEVFLKFNNEFIYISKVNNGQSTAQNIKIFNIK 172 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEV----HRKSPISKDISIMKFKS 225 D A+SG +++ IL +G + +K ++I +FK Sbjct: 173 DLNLSSFIEAKSGIF--EKKNWILKEGNLTLLPKEYELGNKGLNISEFKE 220 >gi|157826222|ref|YP_001493942.1| hypothetical protein A1C_06005 [Rickettsia akari str. Hartford] gi|157800180|gb|ABV75434.1| hypothetical protein A1C_06005 [Rickettsia akari str. Hartford] Length = 362 Score = 53.4 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 66/188 (35%), Gaps = 6/188 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K+ Y+ + + FL+ ++ + + I + + + ++ Y IP + Sbjct: 4 LKTLSWYLAKLYSKCFLVILFLLIVLLIISNIFDLLQKFKNIYVPFSFFWRLILYKIPYL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V L+++ +N EL + ++G ++ + ++L I N Sbjct: 64 LGQVCSLISFTAMLFFLSNLTKNNELTAMLSSGIHIWQVLVIPCIVTLILGIVFTTILNP 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I + L AK LT L E + + L S N +Q FI + Sbjct: 124 IGTIGLQKYELLEAK----LTKKALSEGIISK--SGLLFFESLNGENQIIQTQFINVAEK 177 Query: 181 TQTHKIYY 188 + Sbjct: 178 KLNNITIL 185 >gi|166154182|ref|YP_001654300.1| putative membrane transport protein [Chlamydia trachomatis 434/Bu] gi|166155057|ref|YP_001653312.1| putative membrane transport protein [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335427|ref|ZP_07223671.1| putative membrane transport protein [Chlamydia trachomatis L2tet1] gi|165930170|emb|CAP03654.1| putative membrane transport protein [Chlamydia trachomatis 434/Bu] gi|165931045|emb|CAP06608.1| putative membrane transport protein [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 366 Score = 53.4 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 67/376 (17%), Positives = 126/376 (33%), Gaps = 39/376 (10%) Query: 1 MKSFELYILRCIGRSFL-MSCLFIVFIAWVIQILQRINL--VSSSTESLNILLKISGYLI 57 M ++ Y+L S + L ++F A + L + + L + L I Sbjct: 1 MVIWKRYLLSRFWISLSSLFFLAVIFYASIHHSLHAFREGKTAIAGAPLQLSLLYYLSQI 60 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 + P A+ +T L SM E+L++ +G S TLI+P++ + L+++ L+ + Sbjct: 61 SLKAEFILPQLVAIASTITLFSMQSKREILLLQASGLSLKTLIRPLVISSSLITLLLYAN 120 Query: 118 ENIIEPKCRSTI-------KQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTL 170 + P C K KAQ + YL++ + I S TL Sbjct: 121 FQWLHPICEKISVTKEHMDKGTLEKAQEKIPALYLKDQT-------VLIFSSINRRAATL 173 Query: 171 QGIFIVDSRDTQTHKIYYAQSGSIDLDRQAII------LNDGEVHRKSPISKDISIMKFK 224 +F + + K YA I ++ E H S +++ + +F Sbjct: 174 NNVFWI-----KGPKTIYAIKKLAFTTPSLPIGLEVSYFSEDENHEVS-LTQFFDMKEFP 227 Query: 225 SYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPN------YRPELLETYRSEFHKRLTQ 278 S I + D + S L P + P+ + + + F+ L Sbjct: 228 ELEFSYYDNPFSKIFITGRDCSFSAFLQAIPWHAAKFGLLTTVPQRILSLLTLFYYMLIS 287 Query: 279 WLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 L + + + A R K + L F + N +P Sbjct: 288 PLLCI--AAVILSAHLCLRFHRLPKITWAYLVPLGTINIFFVVLK--AGMVLANNSVLPA 343 Query: 339 LYLFLFCISSIFLLMI 354 L + + L+ + Sbjct: 344 LQVMFIPAGFMLLITL 359 >gi|157829030|ref|YP_001495272.1| hypothetical protein A1G_06555 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933754|ref|YP_001650543.1| hypothetical protein RrIowa_1403 [Rickettsia rickettsii str. Iowa] gi|157801511|gb|ABV76764.1| hypothetical protein A1G_06555 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908841|gb|ABY73137.1| hypothetical membrane spanning protein [Rickettsia rickettsii str. Iowa] Length = 362 Score = 53.0 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 26/188 (13%), Positives = 67/188 (35%), Gaps = 6/188 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K+ Y+ + + F + ++ + + + + + + L++ Y IP + Sbjct: 4 LKTLSWYLTKLYSKCFFIILFLLIGLLIISNVFDLLQKFKNIYVPFSFFLRLILYKIPYL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V+ L ++ +N EL + ++G ++ + I+ + + I Sbjct: 64 LGQVSSLISFTAMLFFLRNLTKNNELTAMLSSGIHIWQVL---VIPCIVTLMLGIVFTTI 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +++ + LT L E + + L S + +Q FI + Sbjct: 121 LNPISTIGLQKYEL-LEAKLTKKALSEGIISK--SGLLFFESLNDETQIIQTQFINVAEK 177 Query: 181 TQTHKIYY 188 + Sbjct: 178 KLNNITIL 185 >gi|67459625|ref|YP_247249.1| permease [Rickettsia felis URRWXCal2] gi|67005158|gb|AAY62084.1| Predicted permeases [Rickettsia felis URRWXCal2] Length = 362 Score = 53.0 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 66/188 (35%), Gaps = 6/188 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K+ Y+ + + F + ++ + + I + + + ++ Y IP + Sbjct: 4 LKTLSWYLTKLYSKCFFIILFLLIGLLIISNIFDLLQKFKNIYVPFSFFWRLILYKIPYL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V+ L ++ +N EL + ++G ++ + ++L I N Sbjct: 64 LGQVSSLISFTSMLFFLRNLTKNNELTAMLSSGIHIWQVLVIPCIVTLILGIVFTTILNP 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I + L AK LT L E + + L S + N +Q FI + Sbjct: 124 IGTIGLQKYELLEAK----LTKKTLSEGIISK--SGLLFFESLKDENQIIQTQFINIAEK 177 Query: 181 TQTHKIYY 188 + Sbjct: 178 KLNNITIL 185 >gi|224438054|ref|ZP_03658993.1| hypothetical protein HcinC1_08770 [Helicobacter cinaedi CCUG 18818] gi|313144499|ref|ZP_07806692.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] gi|313129530|gb|EFR47147.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] Length = 358 Score = 53.0 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 55/368 (14%), Positives = 122/368 (33%), Gaps = 39/368 (10%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 ++ + FL+ L + I L+ I + S N+L+ Y L Sbjct: 2 LIRFVGFYYLKYFLIIFLGLEGFFLAIDTLKYIEELPD---SANLLILFLFYDGVFALTY 58 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + + + ++++L + G S+ ++ P+L ++ LL+ Sbjct: 59 TLPISLVLCSIMFYMAFLKSSQLTALMALGYSKRQILAPLLLISSLLTAGFIGLNATPFA 118 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP----NNTLQGIFIVDSR 179 + + + + + ENL + + YI + K P +GI + Sbjct: 119 YAKEYAESIIYQNAQN-----IRENLLLK-SGNQYIFLRKLYPLFNGEARAEGIKVFTL- 171 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILND------------GEVHRKSPISKDISIMK-FKSY 226 D ++ + Y ++ ++ +L GE + +++ I+K F S Sbjct: 172 DENSNLVAYHEANEAFFEKNIWVLKKAKSVDITNSPTLGEKALDISLKEELEILKGFSSK 231 Query: 227 TLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLF-PVIF 285 L+T + + + +L N ++ R L L F P+ Sbjct: 232 VLETIAQDKPIASIVDAFASLKIAKRQNVSSDKIRGILYGL--------LVIPFFVPLCI 283 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC 345 +I+ +L R F+S+ ++ ++ F + Y + L Sbjct: 284 AIIAY---YIPSLPRYGNLTLISFVSIIVALAIWGVFYSLSQLSVAGLVYPEVGLLLPMG 340 Query: 346 ISSIFLLM 353 I + Sbjct: 341 ILCAVFMW 348 >gi|108760212|ref|YP_631129.1| hypothetical protein MXAN_2918 [Myxococcus xanthus DK 1622] gi|108464092|gb|ABF89277.1| putative membrane protein [Myxococcus xanthus DK 1622] Length = 371 Score = 53.0 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 40/366 (10%), Positives = 104/366 (28%), Gaps = 11/366 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + +Y+LR R L +V + V+ + R L + + ++ Y + Sbjct: 3 GTLFIYVLRTYLRFALGILAGLVLVFVVVDFVDRAKLYTGPGW-VWDAAELYFYKAMMSV 61 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + ++++ + E+ I L P+L + + + L + + Sbjct: 62 QQLGPAALLLAAGTTVSALRKQGEVTAIRALTFGPSALYLPILVASFVACVGLVAFDERV 121 Query: 122 EPKCRSTIKQLSAKAQLA--LTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + +++ + Y +FR D+++ Q + + Sbjct: 122 ATYSGRRVDEITTQRFNKWGDWRFYYTPKQWFRRGDNIFFLRGGSAQEG-FQDVSVFTVT 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-DISIMKFKSYTLQTESANSSTI 238 ++ + SG ++ L D K + + Y L Sbjct: 181 ESFDLQRRLDASGMFPVEGMRWRLTDVVERTFDGEGKTSVRQLPEAEYDLGVAVTAFRIR 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + S L + + + H R + L+ + Sbjct: 241 PGRPEQMRASELREQIVARRDV-GLATKQFELALHNRFAYPMAAFPAALLGV--GLALRA 297 Query: 299 VRQRKKIHPIFISLSISF---GVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 R+ I L + G+ ++ +P L + + + + + Sbjct: 298 NRRGHLTAAIIEGLLTAVAMWGLMMVCRTLVLTERLSPGVAAWTPTVLLGLIAGAVWLQR 357 Query: 356 KKYTKI 361 + + Sbjct: 358 EGRLHL 363 >gi|216263568|ref|ZP_03435563.1| putative permease, YjgP/YjgQ family protein [Borrelia afzelii ACA-1] gi|215980412|gb|EEC21233.1| putative permease, YjgP/YjgQ family protein [Borrelia afzelii ACA-1] Length = 333 Score = 52.7 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 44/100 (44%), Gaps = 1/100 (1%) Query: 23 IVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNR 82 ++ I + +N + SL + I +P F +N++ +++ Sbjct: 1 MILIILGDLFVNLLNFL-EKNISLKDIFYIYYLYLPKAFSDGVALSFLFAISNLIGNLSM 59 Query: 83 NTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 E++ + + G +++P++ +++ +S+ LF +N + Sbjct: 60 RNEIIGLFSCGVPLTRILRPIILISVFISVVLFFFDNYLV 99 >gi|257459022|ref|ZP_05624141.1| permease YjgP/YjgQ [Campylobacter gracilis RM3268] gi|257443407|gb|EEV18531.1| permease YjgP/YjgQ [Campylobacter gracilis RM3268] Length = 348 Score = 52.7 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 60/365 (16%), Positives = 118/365 (32%), Gaps = 26/365 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y + F + + + I +L + SS + + + ++ + Sbjct: 1 MKLYVKYAALSYLKYFFILLIALECFYVGIDVLTNLKDFPSSANTALLYIALTAAV---A 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + +M R+ EL+ G S+ LI P +A+ ++ Sbjct: 58 LSYTLPLSLIFALILMGFNMIRSNELVSFYALGVSKNALIIPPFLIALAIT--ASFIALN 115 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + K Q LT F + YI I N N I I + D Sbjct: 116 STPFAYA------LKFQKNLTDLSPTGGDMFLKFEGKYIYIKALNGKNA-NDITIFNIGD 168 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGE-----VHRKSPISKDISIMKFKSYTLQTESANS 235 +A SG + L D K S S + +S L+ +S Sbjct: 169 NSVASRSHASSGEY--AGKIWHLRDVNTTTLPTQLKLGGSGLKSKLSAQSEALKGFDPSS 226 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 V ++ + +++ + T ++ + + FP+ L +V Sbjct: 227 IASVYDTSNVYSIRDALRSIRTFSHQGVNISTIKASLYNMI---FFPLFAPLAVLVLYYY 283 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP----ILYLFLFCISSIFL 351 + + + + I+ WG +++ + N IP I+ + + FL Sbjct: 284 LPVTGRFFNLALLSFGFFIATLCAWGVLFVLIRFSLNGVIIPEFGIIVPIIALLGFAAFL 343 Query: 352 LMIKK 356 + + Sbjct: 344 VFKHR 348 >gi|157964920|ref|YP_001499744.1| putative permease [Rickettsia massiliae MTU5] gi|157844696|gb|ABV85197.1| Putative permease [Rickettsia massiliae MTU5] Length = 370 Score = 52.3 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 26/188 (13%), Positives = 67/188 (35%), Gaps = 6/188 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K+ Y+ + + F + ++ + + I + + + ++ Y IP + Sbjct: 12 LKTLSWYLTKLYFKCFFIILFLLIGLLIISNIFDLLQKFKNIYVPFSFFWRLILYKIPYL 71 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V+ L ++ +N EL + ++G ++ + I+ + + I Sbjct: 72 LGQVSSLISFSAMLFFLRNLTKNNELTAMLSSGIHIWQVL---VIPCIVTLMLGIVFTTI 128 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +++ + LT L E + + L + + N +Q FI + Sbjct: 129 LNPIGTIGLQKYEL-LEAKLTKKALSEGIISK--SGLLFFEALNDENQIIQTQFINVAEK 185 Query: 181 TQTHKIYY 188 + Sbjct: 186 KLNNITIL 193 >gi|213022333|ref|ZP_03336780.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 125 Score = 52.3 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 17/124 (13%), Positives = 48/124 (38%), Gaps = 6/124 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + + I++ ++ + + + L + +P Sbjct: 5 GVLDRYIGKTI---FTTIMMTLFMLVSLSGIIKFVDQLKKAGQGNYDALGAGMYTLLSVP 61 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + + P + L + + +EL+++ +G +R+ + V+ AI L + Sbjct: 62 KDIQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIG 121 Query: 119 NIIE 122 + Sbjct: 122 EWVA 125 >gi|153875332|ref|ZP_02003181.1| permease YjgP/YjgQ [Beggiatoa sp. PS] gi|152068203|gb|EDN66818.1| permease YjgP/YjgQ [Beggiatoa sp. PS] Length = 218 Score = 51.9 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 26/169 (15%), Positives = 62/169 (36%), Gaps = 20/169 (11%) Query: 165 NPNNTLQGIFIVDSRDTQTHKIYYAQSGS--IDLDRQAIILNDGEVHRKSPISKDISIMK 222 N +NT+Q +F+ + I A G I ++L DG + P + + + + Sbjct: 6 NESNTMQTLFVQVNL-PHKRVIMVADRGYQVIQEGELFMVLIDGYRYESPPGALNYIVTQ 64 Query: 223 FKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFP 282 F + ++ T D + LL + ++E RL+ L Sbjct: 65 FAEHRIRV-PKRLDTPKNDRRDAIPTDLLWFAKEP---------SLQAELQWRLSLPLTV 114 Query: 283 VIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ 331 ++ +++ RQ + +F L ++ ++ +++ ++ Sbjct: 115 ILLAALAVP--LSHTTPRQGQYAKILFGIL-----IYLIYNNLLNVAKK 156 >gi|15605868|ref|NP_213245.1| hypothetical protein aq_359 [Aquifex aeolicus VF5] gi|14916753|sp|O66685|Y359_AQUAE RecName: Full=Uncharacterized protein aq_359 gi|2983036|gb|AAC06646.1| putative protein [Aquifex aeolicus VF5] Length = 356 Score = 51.9 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 51/354 (14%), Positives = 115/354 (32%), Gaps = 18/354 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSST--ESLNILLKISGYLIPTV 60 + Y+L FL V + + +L + +L+ L I + Sbjct: 2 LLDRYLLSRFLGIFLNVSFVSVLLVSLYALLDFLVGFKEKRTDVALSYFLNILPLGFYYI 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + V EL + + G S + PVL ++ LS + Sbjct: 62 SFITLSISLILFLRKVFEK---KMELTV-QSFGISPLRFSLPVLLFSVFLSSTFLLGNEY 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFS-YLEENLFFRLDDDL--YIKISKYN-PNNTLQGIF-I 175 PK + + + +++ F + ++++ Y + N + +L + + Sbjct: 118 AFPKLLGNLWFIEKNYKKKQEVKGFIKNFWFIKKENEVKTYYHVGNLNLSDGSLFNFYTM 177 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 R + D++ I GE++ ++ + K++ L Sbjct: 178 KVERKNLNPLEVLKVFSGVWKDKEIFI-RSGEIYDFEKGKRE--KVFNKTFKLGLSIKEV 234 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 K + +LS + + ++ Y E R+ L PV ISI + Sbjct: 235 ELFSEKIDFLSLSEIFFLMQKSKKV-GLNVDVYTGELFYRVMFSLSPV---FISIFSLYL 290 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 + ++ P F+ + + I+ + P ++ +FL + S+ Sbjct: 291 FFKHKVLSQVIPRFLVFIVILWLVILSPKILPQKANQPVLYSLIPIFLLILYSL 344 >gi|194323556|ref|ZP_03057333.1| hypothetical protein FTE_1717 [Francisella tularensis subsp. novicida FTE] gi|208779047|ref|ZP_03246393.1| hypothetical protein FTG_1341 [Francisella novicida FTG] gi|194322411|gb|EDX19892.1| hypothetical protein FTE_1717 [Francisella tularensis subsp. novicida FTE] gi|208744847|gb|EDZ91145.1| hypothetical protein FTG_1341 [Francisella novicida FTG] Length = 283 Score = 51.9 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 53/135 (39%), Gaps = 8/135 (5%) Query: 70 AMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTI 129 + L+ + N+E++++ + G S + K V+ + ++ S+ + I P Sbjct: 1 MVGALMGLSLLANNSEIIVLRSFGRSTAQIAKGVILVGLIGSVTTMVFGGYIAP------ 54 Query: 130 KQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYA 189 + + +Y +L+F+ D + GI +D + +I YA Sbjct: 55 --ILQRQVDTNMVTYNTHDLWFKTPDGFMNIANIEPTKGKAYGIRKFMVQDNKVREIRYA 112 Query: 190 QSGSIDLDRQAIILN 204 +S + D A + N Sbjct: 113 ESATYINDASANVFN 127 >gi|157804140|ref|YP_001492689.1| hypothetical protein A1E_04940 [Rickettsia canadensis str. McKiel] gi|157785403|gb|ABV73904.1| hypothetical protein A1E_04940 [Rickettsia canadensis str. McKiel] Length = 333 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 56/162 (34%), Gaps = 6/162 (3%) Query: 27 AWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTEL 86 + I + + + ++ Y IP +L V+ L+++ +N EL Sbjct: 1 MIISNIFDLLQKFKNIYVPFSFFWRLILYKIPYLLGQVSSLISFTAMLFFLSNLTKNNEL 60 Query: 87 LIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLE 146 +I ++G ++ + ++L I N I + L AK LT L Sbjct: 61 TVILSSGVHIWQVLVSPCIVTLILGIVFTTILNPIGTIGLQKYELLEAK----LTKKALS 116 Query: 147 ENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYY 188 + + + L S + N +Q FI + + Sbjct: 117 DGIISK--SGLLFFESLNDANQIIQTQFINVAEKKLNNITVL 156 >gi|15605573|ref|NP_220359.1| hypothetical protein CT838 [Chlamydia trachomatis D/UW-3/CX] gi|76789583|ref|YP_328669.1| hypothetical protein CTA_0914 [Chlamydia trachomatis A/HAR-13] gi|237803270|ref|YP_002888464.1| putative membrane transport protein [Chlamydia trachomatis B/Jali20/OT] gi|255311679|ref|ZP_05354249.1| putative membrane transport protein [Chlamydia trachomatis 6276] gi|255317980|ref|ZP_05359226.1| putative membrane transport protein [Chlamydia trachomatis 6276s] gi|3329309|gb|AAC68435.1| hypothetical protein CT_838 [Chlamydia trachomatis D/UW-3/CX] gi|76168113|gb|AAX51121.1| hypothetical protein CTA_0914 [Chlamydia trachomatis A/HAR-13] gi|231274504|emb|CAX11300.1| putative membrane transport protein [Chlamydia trachomatis B/Jali20/OT] gi|296436394|gb|ADH18568.1| putative membrane transport protein [Chlamydia trachomatis G/9768] gi|296437325|gb|ADH19495.1| putative membrane transport protein [Chlamydia trachomatis G/11222] gi|296438253|gb|ADH20414.1| putative membrane transport protein [Chlamydia trachomatis G/11074] gi|297140754|gb|ADH97512.1| putative membrane transport protein [Chlamydia trachomatis G/9301] gi|297748966|gb|ADI51512.1| Hypothetical protein CTDEC_0838 [Chlamydia trachomatis D-EC] gi|297749846|gb|ADI52524.1| Hypothetical protein CTDLC_0838 [Chlamydia trachomatis D-LC] Length = 366 Score = 51.5 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 68/376 (18%), Positives = 126/376 (33%), Gaps = 39/376 (10%) Query: 1 MKSFELYILRCIGRSFL-MSCLFIVFIAWVIQILQRINL--VSSSTESLNILLKISGYLI 57 M ++ Y+L S + L ++F A + L + S L + L I Sbjct: 1 MVIWKRYLLSRFWISLSSLFFLAVIFYASIHHSLHAFREGKTAISRAPLQLSLLYYLSQI 60 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 + P A+ +T L SM E+L++ +G S TLI+P++ + L+++ L+ + Sbjct: 61 SLKAEFILPQLVAIASTITLFSMQSKREILLLQASGLSLKTLIRPLVISSSLITLLLYAN 120 Query: 118 ENIIEPKCRSTI-------KQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTL 170 + P C K KAQ + YL++ + I S TL Sbjct: 121 FQWLHPICEKISVTKEHMDKGTLEKAQEKIPALYLKDQT-------VLIFSSINRRAATL 173 Query: 171 QGIFIVDSRDTQTHKIYYAQSGSIDLDRQAII------LNDGEVHRKSPISKDISIMKFK 224 +F + + K YA I ++ E H S +++ + +F Sbjct: 174 NNVFWI-----KGPKTIYAIKKLAFTTPSLPIGLEVSYFSEDENHEVS-LTQFFDMKEFP 227 Query: 225 SYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPN------YRPELLETYRSEFHKRLTQ 278 S I + D + S L P + P+ + + + F+ L Sbjct: 228 ELEFSYYDNPFSKIFITGRDCSFSAFLQAIPWHAAKFGLLTTVPQRILSLLTLFYYMLIS 287 Query: 279 WLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 L + + + A R K + L F + N +P Sbjct: 288 PLLCI--AAVILSAHLCLRFHRLPKITWAYLVPLGTINIFFVVLK--AGMVLANNSVLPA 343 Query: 339 LYLFLFCISSIFLLMI 354 L + + L+ + Sbjct: 344 LQVMFIPAGFMLLITL 359 >gi|237805191|ref|YP_002889345.1| putative membrane transport protein [Chlamydia trachomatis B/TZ1A828/OT] gi|231273491|emb|CAX10407.1| putative membrane transport protein [Chlamydia trachomatis B/TZ1A828/OT] Length = 366 Score = 51.5 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 55/126 (43%), Gaps = 3/126 (2%) Query: 1 MKSFELYILRCIGRSFL-MSCLFIVFIAWVIQILQRINL--VSSSTESLNILLKISGYLI 57 M ++ Y+L S + L ++F A + L + S L + L I Sbjct: 1 MVIWKRYLLSRFWISLSSLFFLAVIFYASIHHSLHAFREGKTAISRAPLQLSLLYYLSQI 60 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 + P A+ +T L SM E+L++ +G S TLI+P++ + L+++ L+ + Sbjct: 61 SLKAEFILPQLVAIASTITLFSMQSKREILLLQASGLSLKTLIRPLVISSSLITLLLYAN 120 Query: 118 ENIIEP 123 + P Sbjct: 121 FQWLHP 126 >gi|34581207|ref|ZP_00142687.1| hypothetical protein [Rickettsia sibirica 246] gi|28262592|gb|EAA26096.1| unknown [Rickettsia sibirica 246] Length = 362 Score = 51.5 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 25/188 (13%), Positives = 66/188 (35%), Gaps = 6/188 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K+ Y+ + + F + ++ + + + + + + ++ Y IP + Sbjct: 4 LKTLSWYLTKLYSKCFFIILFLLIGLLIISNVFDLLQKFKNIYVPFSFFWRLILYKIPYL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V+ L ++ +N EL + ++G ++ + I+ + + I Sbjct: 64 LGQVSSLISFTAMLFFLRNLTKNNELTAMLSSGIHIWQVL---VIPCIVTLMLGIVFTTI 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +++ + LT L E + + L S + +Q FI + Sbjct: 121 LNPIGTIGLQKYEL-LEAKLTKKALSEGIISK--SGLLFFESLNDKTQIIQTQFINVAEK 177 Query: 181 TQTHKIYY 188 + Sbjct: 178 KLNNITIL 185 >gi|229587132|ref|YP_002845633.1| Putative permease [Rickettsia africae ESF-5] gi|228022182|gb|ACP53890.1| Putative permease [Rickettsia africae ESF-5] Length = 362 Score = 51.5 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 25/188 (13%), Positives = 66/188 (35%), Gaps = 6/188 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K+ Y+ + + F + ++ + + + + + + ++ Y IP + Sbjct: 4 LKTLSWYLTKLYSKCFFIILFLLIGLLIISNVFDLLQKFKNIYVPFSFFWRLILYKIPYL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V+ L ++ +N EL + ++G ++ + I+ + + I Sbjct: 64 LGQVSSLISFTAMLFFLRNLTKNNELTAMLSSGIHIWQVL---VIPCIVTLMLGIVFTTI 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +++ + LT L E + + L S + +Q FI + Sbjct: 121 LNPIGTIGLQKYEL-LEAKLTKKALSEGIISK--SGLLFFESLNDETQIIQTQFINVAEK 177 Query: 181 TQTHKIYY 188 + Sbjct: 178 KLNNITIL 185 >gi|15893122|ref|NP_360836.1| hypothetical protein RC1199 [Rickettsia conorii str. Malish 7] gi|238650591|ref|YP_002916443.1| hypothetical protein RPR_03025 [Rickettsia peacockii str. Rustic] gi|15620329|gb|AAL03737.1| unknown [Rickettsia conorii str. Malish 7] gi|238624689|gb|ACR47395.1| hypothetical protein RPR_03025 [Rickettsia peacockii str. Rustic] Length = 362 Score = 51.5 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 25/188 (13%), Positives = 66/188 (35%), Gaps = 6/188 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K+ Y+ + + F + ++ + + + + + + ++ Y IP + Sbjct: 4 LKTLSWYLTKLYSKCFFIILFLLIGLLIISNVFDLLQKFKNIYVPFSFFWRLILYKIPYL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V+ L ++ +N EL + ++G ++ + I+ + + I Sbjct: 64 LGQVSSLISFTAMLFFLRNLTKNNELTAMLSSGIHIWQVL---VIPCIVTLMLGIVFTTI 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +++ + LT L E + + L S + +Q FI + Sbjct: 121 LNPIGTIGLQKYEL-LEAKLTKKALSEGIISK--SGLLFFESLNDETQIIQTQFINVAEK 177 Query: 181 TQTHKIYY 188 + Sbjct: 178 KLNNITIL 185 >gi|91204945|ref|YP_537300.1| putative permeases [Rickettsia bellii RML369-C] gi|91068489|gb|ABE04211.1| Putative permeases [Rickettsia bellii RML369-C] Length = 362 Score = 51.5 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 20/139 (14%), Positives = 48/139 (34%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K+ Y+ + + F + ++ + + + + + + + Y +P + Sbjct: 4 LKTLSWYLAKLYFKCFFIILSILIGLLIISNLFDLLQKFKNMYVPFDFFWRFILYKVPYL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V+ L ++ +N EL I ++G ++ + ++L I N Sbjct: 64 LNQVSALISFTSMLFFLRNLTKNNELTAILSSGIHIWQVLIIPYIVTLILGIVFTTILNP 123 Query: 121 IEPKCRSTIKQLSAKAQLA 139 I L AK Sbjct: 124 IGALGLQKYDLLEAKLTKK 142 >gi|29840523|ref|NP_829629.1| YjgP/YjgQ family protein [Chlamydophila caviae GPIC] gi|29834872|gb|AAP05507.1| YjgP/YjgQ family protein [Chlamydophila caviae GPIC] Length = 367 Score = 51.5 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 66/376 (17%), Positives = 125/376 (33%), Gaps = 40/376 (10%) Query: 1 MKSFELYILRCIGRSFL-MSCLFIVFIAWVIQILQRI---NLVSSSTESLNILLKISGYL 56 M ++ Y+L S + + L VF A + L I + +S SL + + Sbjct: 1 MYIWKRYVLTKFWLSLVSLIVLAFVFYASIHHSLHAIKGNSTALASGASLKLSVLYYLSQ 60 Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 I + P A+ TT L SM E+L++ +G S +L P++ + ++++ L+ Sbjct: 61 IALKAEFLIPQLVAVATTITLFSMQNKREVLLLQASGLSLKSLTAPLIRSSFIITLLLYA 120 Query: 117 SENIIEPKCRSTI-------KQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT 169 + + P C + KAQ + YL++ + + S T Sbjct: 121 NFQWLHPICEKISTTKEHMDRGTLDKAQDKVPALYLKDQT-------VLLYSSIEQKALT 173 Query: 170 LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAI-----ILNDGEVHRKSPISKDIS-IMKF 223 L +F + + K Y + ++ ++ E + + S + +F Sbjct: 174 LNKVFWI-----KNPKTIYTME-KLAFTTPSLPIGLDVIRFSETESGTMELSEFSDMKEF 227 Query: 224 KSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNP------NYRPELLETYRSEFHKRLT 277 S I LS P N P+ + + S F+ L Sbjct: 228 PEIEFGFYDNPFSKIFTAGGKNRLSESFRAIPWNATGLGLSTTIPQRISSLLSTFYYMLI 287 Query: 278 QWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP 337 L + +I + A R + L F + N +P Sbjct: 288 SPLACIS-AMI-LSAYLCLRFSRVPTVTLAYLVPLGTINTFFV--FLKAGMVLSNSSVLP 343 Query: 338 ILYLFLFCISSIFLLM 353 IL + LF + + + Sbjct: 344 ILPVMLFPLVVLAIFT 359 >gi|195953935|ref|YP_002122225.1| hypothetical protein HY04AAS1_1565 [Hydrogenobaculum sp. Y04AAS1] gi|195933547|gb|ACG58247.1| hypothetical protein HY04AAS1_1565 [Hydrogenobaculum sp. Y04AAS1] Length = 289 Score = 51.1 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 38/249 (15%), Positives = 82/249 (32%), Gaps = 14/249 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ F L+ L+ + + + I FI + I+ + ++ S + L Sbjct: 1 MRIF-LFFLKGLLVNVYFYTMIICFIFFSIESFSLVYVL--SYVNGLTALGFLASWFSYY 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 P + + + ++ G S + +++ L+ + F Sbjct: 58 FIYFLPLGVIISVFSFFYKLFSQNKIQAFYIFGVSPLYILRQSLYAVAIPLFLGFSFSFF 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I + + K + + F + D + + + + + +F+ Sbjct: 118 ITNEDITYAKNYLMEEFAKRVIEAIPPKTFEHVGD-YAVYFDNKSKD-SFENMFVS---- 171 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 Q K Y + + DGEV S + ++ FKS +Q SSTI Sbjct: 172 -QDGKYIYMKKAYYKEG--VLYAEDGEV--VSEENSKDYVVDFKSLKIQIYKLTSSTISK 226 Query: 241 KANDQNLSF 249 K +++ F Sbjct: 227 KIVKKDILF 235 >gi|328675789|gb|AEB28464.1| conserved membrane protein of unknown function [Francisella cf. novicida 3523] Length = 283 Score = 51.1 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 53/135 (39%), Gaps = 8/135 (5%) Query: 70 AMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTI 129 + L+ + N+E++++ + G S + K V+ + I+ SI + I P Sbjct: 1 MVGALMGLSLLANNSEIIVLRSFGRSTAQIAKGVVLVGIIGSITTIVFGGYIAP------ 54 Query: 130 KQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYA 189 + + +Y +L+F+ D + GI +D + +I YA Sbjct: 55 --ILQRQVDTNMVTYNTHDLWFKTPDGFMNIANIEPTKGKAYGIRKFMVQDNKVREIRYA 112 Query: 190 QSGSIDLDRQAIILN 204 +S + D A + N Sbjct: 113 ESATYINDASANVFN 127 >gi|237750188|ref|ZP_04580668.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879] gi|229374082|gb|EEO24473.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879] Length = 356 Score = 50.7 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 57/368 (15%), Positives = 114/368 (30%), Gaps = 37/368 (10%) Query: 11 CIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFA 70 + L+ + F + LQ + ++ S + L V P Sbjct: 9 RYLKPTLVILCGLEFFFICVDSLQYFDALAQSANNAIWFLAFDAM---YAFNYVLPLALL 65 Query: 71 METTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIK 130 + S+ ++ + + + + G SR + P + L+ + Sbjct: 66 LGLIVFYISLIKSNQYVALLSLGYSRRKIFYPPFLIINLVVCGYIGLNATDFVYAQERAD 125 Query: 131 QLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-----DSRDTQTHK 185 + + + A L F R + D Y + I I DSR + Sbjct: 126 NIVSSSNNADVSKDL----FIRYNTDYVFFEKVYPLLQKAENIQIYHTEYKDSR--KLVS 179 Query: 186 IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK-----------FKSYTLQTESAN 234 I A+ G D ++ + S D ++ FK L T N Sbjct: 180 ITRAKEGYFHNDEWKLLNPQVSILPTSYDLGDKGMITTGHDSTTTLKGFKPKVLDTFYKN 239 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 I + +L L+ + R L T + P ++ ++ A Sbjct: 240 KPAISITDAFYSLQILMQEGADTARTRGVLY-----------TLAVTPFFISMLCVIIAY 288 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP-ILYLFLFCISSIFLLM 353 + + + + +SLS+ + WG + + K+ N +IP L I + ++ Sbjct: 289 YAPPLARYGNLAMLGVSLSVLSLMVWGVFFSLGKLNANAVFIPEFSMLVPLGILLVVSIV 348 Query: 354 IKKKYTKI 361 +K +I Sbjct: 349 YYRKLDEI 356 >gi|163782091|ref|ZP_02177090.1| hypothetical protein HG1285_18199 [Hydrogenivirga sp. 128-5-R1-1] gi|159882623|gb|EDP76128.1| hypothetical protein HG1285_18199 [Hydrogenivirga sp. 128-5-R1-1] Length = 357 Score = 50.7 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 30/202 (14%), Positives = 66/202 (32%), Gaps = 7/202 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y+L + F V + + + L+ +L + LK + YLIP Sbjct: 1 MNIFDRYLLLNFLKVFSAISFVSVGLIVLYSLTDF--LLGFKETNLEVGLKYTLYLIPLG 58 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +++ + + + + G S + + ++LS Sbjct: 59 FYILSSLLVNIALIVLFRRFFSKGVDFTVQSFGISPLRFSAVFVGFTLVLSSLFLFLNES 118 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFF---RLDDDLYIKISKYN-PNNTLQGIF-I 175 P + + + L E L+F Y+ I + + G+F + Sbjct: 119 FLPGLFKRVWYIEKTYKKKQEIGRLVERLWFVKKTSFGKYYVYIGSLDVTSGKFAGLFML 178 Query: 176 VDSRDTQTHKIYYAQSGSIDLD 197 S + + ++ +SG + Sbjct: 179 RVSSEGKVKEVVEGKSGRWSGN 200 >gi|255349243|ref|ZP_05381250.1| putative membrane transport protein [Chlamydia trachomatis 70] gi|255503780|ref|ZP_05382170.1| putative membrane transport protein [Chlamydia trachomatis 70s] gi|255507461|ref|ZP_05383100.1| putative membrane transport protein [Chlamydia trachomatis D(s)2923] gi|289525884|emb|CBJ15366.1| putative membrane transport protein [Chlamydia trachomatis Sweden2] gi|296435470|gb|ADH17648.1| putative membrane transport protein [Chlamydia trachomatis E/150] gi|296439187|gb|ADH21340.1| putative membrane transport protein [Chlamydia trachomatis E/11023] Length = 366 Score = 50.7 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 67/376 (17%), Positives = 125/376 (33%), Gaps = 39/376 (10%) Query: 1 MKSFELYILRCIGRSFL-MSCLFIVFIAWVIQILQRINL--VSSSTESLNILLKISGYLI 57 M ++ Y+L S + L ++F A + L + + L + L I Sbjct: 1 MVIWKRYLLSRFWISLSSLFFLAVIFYASIHHSLHAFREGKTAIAGAPLQLSLLYYLSQI 60 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 + P A+ +T L SM E+L++ +G S TLI P++ + L+++ L+ + Sbjct: 61 SLKAEFILPQLVAIASTITLFSMQSKREILLLQASGLSLKTLICPLVISSSLITLLLYAN 120 Query: 118 ENIIEPKCRSTI-------KQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTL 170 + P C K KAQ + YL++ + I S TL Sbjct: 121 FQWLHPICEKISVTKEHMDKGTLEKAQEKIPALYLKDQT-------VLIFSSINRRAATL 173 Query: 171 QGIFIVDSRDTQTHKIYYAQSGSIDLDRQAII------LNDGEVHRKSPISKDISIMKFK 224 +F + + K YA I ++ E H S +++ + +F Sbjct: 174 NNVFWI-----KGPKTIYAIKKLAFTTPSLPIGLEVSYFSEDENHEVS-LTQFFDMKEFP 227 Query: 225 SYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPN------YRPELLETYRSEFHKRLTQ 278 S I + D + S L P + P+ + + + F+ L Sbjct: 228 ELEFSYYDNPFSKIFITGRDCSFSAFLQAIPWHAAKFGLLTTVPQRILSLLTLFYYMLIS 287 Query: 279 WLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 L + + + A R K + L F + N +P Sbjct: 288 PLLCI--AAVILSAHLCLRFHRLPKITWAYLVPLGTINIFFVVLK--AGMVLANNSVLPA 343 Query: 339 LYLFLFCISSIFLLMI 354 L + + L+ + Sbjct: 344 LQVMFIPAGFMLLITL 359 >gi|328676743|gb|AEB27613.1| conserved membrane protein of unknown function [Francisella cf. novicida Fx1] Length = 283 Score = 50.7 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 23/135 (17%), Positives = 53/135 (39%), Gaps = 8/135 (5%) Query: 70 AMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTI 129 + L+ + N+E++++ + G S + K V+ + ++ S+ + I P Sbjct: 1 MVGALMGLSLLANNSEIIVLRSFGRSTAQIAKGVILVGLIGSVTTIVFGGYIAP------ 54 Query: 130 KQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYA 189 + + +Y +L+F+ D + GI +D + +I YA Sbjct: 55 --ILQRQVDTNMVTYNTHDLWFKTPDGFMNIANIEPTKGKAYGIRKFMVQDNKVREIRYA 112 Query: 190 QSGSIDLDRQAIILN 204 ++ + D A + N Sbjct: 113 ENATYINDASANVFN 127 >gi|315122194|ref|YP_004062683.1| putative permease protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495596|gb|ADR52195.1| putative permease protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 321 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 31/68 (45%) Query: 52 ISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLS 111 +S +P ++ PF + + V ++NR EL+I G S L+ P + LL Sbjct: 15 LSVTRLPLIIQQTIPFISLIVSMIVFFNLNRTNELVITRAVGVSIWQLLSPFTTGSFLLG 74 Query: 112 IFLFISEN 119 +F + N Sbjct: 75 MFTILVIN 82 >gi|224531722|ref|ZP_03672354.1| permease, YjgP/YjgQ family [Borrelia valaisiana VS116] gi|224511187|gb|EEF81593.1| permease, YjgP/YjgQ family [Borrelia valaisiana VS116] Length = 329 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 36/78 (46%) Query: 45 SLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVL 104 +L I +P F +N++ +++ E++ + + G S +++P++ Sbjct: 18 GFKDILYIYYLYLPKAFSDGVALSFLFAISNLIGNLSMRNEIIGLFSCGVSLTRILRPII 77 Query: 105 FLAILLSIFLFISENIIE 122 +++ +S LF +N + Sbjct: 78 LISVFISAALFFFDNYLV 95 >gi|51473938|ref|YP_067695.1| hypothetical protein RT0756 [Rickettsia typhi str. Wilmington] gi|51460250|gb|AAU04213.1| conserved hypothetical protein [Rickettsia typhi str. Wilmington] Length = 362 Score = 50.3 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 29/188 (15%), Positives = 61/188 (32%), Gaps = 6/188 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K+ LY+ + + F + ++ + + I + + + + Y IP + Sbjct: 4 LKTLSLYLTKLYSKCFFIILFLLIVLLIISNIFDLLQKFKNIYVPFSFFWRFILYKIPYL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V+ L ++ ++ EL+ I ++G ++ + ++L I N Sbjct: 64 LTQVSSLISFTSMLFFLRNLTKSNELIAILSSGIHIWQVLIIPCIVTLILGIICTTLLNP 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I L AK L + L S N +Q FI + Sbjct: 124 ISTIGLQKYAILEAKLTKKALSGGL------ISESGLLFFESLNEHNQIIQTQFIDVAEQ 177 Query: 181 TQTHKIYY 188 + Sbjct: 178 KLNNITIL 185 >gi|89071066|ref|ZP_01158277.1| Predicted permease [Oceanicola granulosus HTCC2516] gi|89043397|gb|EAR49616.1| Predicted permease [Oceanicola granulosus HTCC2516] Length = 108 Score = 50.3 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 34/103 (33%), Gaps = 4/103 (3%) Query: 186 IYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 IY A + + +++ DG + + +F +T S + Sbjct: 2 IYTAATAYLVRSEGGPQLVMVDGLAQTLRGSDQRLYTTRFNDFTYDIGRLIVSEEPGRLR 61 Query: 244 DQNLSF--LLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVI 284 ++N+ LL + R+E H R+ + L + Sbjct: 62 ERNVWSGPLLQASSALQAQIERPAVALRAEVHDRMNKALLGFV 104 >gi|163784080|ref|ZP_02179031.1| hypothetical protein HG1285_04101 [Hydrogenivirga sp. 128-5-R1-1] gi|159880656|gb|EDP74209.1| hypothetical protein HG1285_04101 [Hydrogenivirga sp. 128-5-R1-1] Length = 295 Score = 50.0 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 41/293 (13%), Positives = 99/293 (33%), Gaps = 11/293 (3%) Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + V + + ++ I G S LI P + +I + + ++ PK + Sbjct: 1 MAAVISFFIVYRELITSRKIYPIFLNGISIKYLITPAVLFSIFVFFIQLFNNLVVMPKSK 60 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLD----DDLYI-KISKYNPNNTLQGIFIV-DSRD 180 + + S ++ +F D+ + N ++ FI + Sbjct: 61 ELSLKYYKTLKGGKLQSEEDKYIFISNQWIKLDNFTFAYFGFLDLNKSIGKNFIYIKLDN 120 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + ++ ++ ++++ ++ + L G + + + + KF+ + + L Sbjct: 121 KEFYPLFRVEAKTVNIQKEKLKLFKGRIVSLADVI-NFDYTKFEKLEYPVKIDTKNLRKL 179 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + S L R Y F R + V ++ + +R Sbjct: 180 IKIKRPTSILQFYEKAIIADRFGYPSGY---FWSRFFSYFTTVFSPIVLTIFIYPWIWLR 236 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 +R+K IF S+ + V + + PY+ P+ ++ I LL Sbjct: 237 RREKYIVIFGSILFYWYVISALASLSETGG-VPYFSPVFINIIYLILGFILLF 288 >gi|225551662|ref|ZP_03772606.1| permease, YjgP/YjgQ family [Borrelia sp. SV1] gi|225371689|gb|EEH01115.1| permease, YjgP/YjgQ family [Borrelia sp. SV1] Length = 333 Score = 50.0 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 15/99 (15%), Positives = 42/99 (42%) Query: 24 VFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRN 83 + + + + + L +L I +P F +N++ +++ Sbjct: 1 MILIMLGDLFVNLLNYLEKNIGLKDILYIYYLYLPKAFSDGVALSFLFAISNLIGNLSMR 60 Query: 84 TELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 E++ + + G ++KP++ ++I +S+ LF +N + Sbjct: 61 NEIIGLFSCGVPLTRILKPIILISIFISVVLFFFDNYLV 99 >gi|226320855|ref|ZP_03796407.1| permease, YjgP/YjgQ family [Borrelia burgdorferi 29805] gi|226233721|gb|EEH32450.1| permease, YjgP/YjgQ family [Borrelia burgdorferi 29805] Length = 333 Score = 50.0 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 15/99 (15%), Positives = 42/99 (42%) Query: 24 VFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRN 83 + + + + + L +L I +P F +N++ +++ Sbjct: 1 MILIMLGDLFVNLLNYLEKNIGLKDILYIYYLYLPKAFSDGVALSFLFAISNLIGNLSMR 60 Query: 84 TELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 E++ + + G ++KP++ ++I +S+ LF +N + Sbjct: 61 NEIIGLFSCGVPLTRILKPIILISIFISVVLFFFDNYLV 99 >gi|169837522|ref|ZP_02870710.1| Hypothetical membrane-spanning protein [candidate division TM7 single-cell isolate TM7a] Length = 92 Score = 50.0 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 12/73 (16%), Positives = 29/73 (39%) Query: 50 LKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAIL 109 +K Y P ++ P + + ++ M + E+ + +G S + + + L Sbjct: 11 IKYLRYGTPEIITNTAPLGVLLGSLLCISKMAKQLEIAAMKTSGISFARIALFPMIFSFL 70 Query: 110 LSIFLFISENIIE 122 +S+ +F I Sbjct: 71 VSMGVFWINYDIL 83 >gi|34763637|ref|ZP_00144566.1| Hypothetical Membrane Spanning Protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27886690|gb|EAA23834.1| Hypothetical Membrane Spanning Protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 191 Score = 50.0 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 24/176 (13%), Positives = 51/176 (28%), Gaps = 12/176 (6%) Query: 186 IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQ 245 I A+S D D I ++ ++ + Y + S + + + Sbjct: 20 IITAKSAKFDTDEDKWIFSNVNIYNVDTK----ETVTKTEYKSDLYKDDPSNFIRASAED 75 Query: 246 NLSFLLNPNPNNPNYR---PELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + + E Y +E KR + I I + A VR Sbjct: 76 PRMLTIKELKKTIKEQKNIGEDTRIYLAELAKRYSFPFASFIVAFIGLSA--SSKYVRGG 133 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMIKK 356 + + I + +G + S + N P + ++ I + + + Sbjct: 134 RTTMNLVICVVAGYGYYLV-SGAFEAMSLNGIVNPFVASWIPNILYLIIGIYFMNR 188 >gi|307721571|ref|YP_003892711.1| permease YjgP/YjgQ family protein [Sulfurimonas autotrophica DSM 16294] gi|306979664|gb|ADN09699.1| permease YjgP/YjgQ family protein [Sulfurimonas autotrophica DSM 16294] Length = 358 Score = 49.6 bits (117), Expect = 8e-04, Method: Composition-based stats. Identities = 58/370 (15%), Positives = 124/370 (33%), Gaps = 33/370 (8%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 YI + FL+ +V + +S S S N++L Y + + ++ Sbjct: 5 KYISLHYIKYFLIILTALVLFVVGFDYMGSAEELSKS--SANLILIYLVYKSFSAIDILL 62 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + + R+ L+ + G SR+ +++P +F++ + I Sbjct: 63 PVALVFAMISTKIYLIRSNALVSFFSLGYSRVDVLRPFVFVSTAVIILFIALHAW---SN 119 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDTQTH 184 + ++ S + + +LFF YI SK P + + I + + Sbjct: 120 FARSEEFSRNIKKNAQYLSPTRDLFFA-YKGKYIYFSKLLPLQESAKNIRVFSVENESLK 178 Query: 185 KIYYAQSGSIDLD-----RQAIILNDGEVHRKSPI-----SKDISIMK-FKSYTLQTESA 233 ++ A+S + R II ++ SP +KD+ I++ F+ L Sbjct: 179 EVVVAKSARYIDNYWFIKRADIITKPDDLSLVSPGITVTKAKDLRILEGFRPKMLDQVYE 238 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFG-LISIVA 292 +K + L N N N + L + + ++P LI I+ Sbjct: 239 GKVNFTIKDAVDAIRLLDKQNINTDNIKAALYKIF-----------IYPFFVPCLIVIIF 287 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ---NPYYIPILYLFLFCISSI 349 VR F ++ + + ++I + I+ + + + + Sbjct: 288 FFVPMSVRFLNVSLFTFGAILATLLTWGILFFLIKLANNKVISSEIGIIVPVVILAVLAF 347 Query: 350 FLLMIKKKYT 359 + T Sbjct: 348 LQWHRHRSST 357 >gi|89898055|ref|YP_515165.1| hypothetical protein CF0248 [Chlamydophila felis Fe/C-56] gi|89331427|dbj|BAE81020.1| conserved hypothetical protein [Chlamydophila felis Fe/C-56] Length = 367 Score = 49.6 bits (117), Expect = 9e-04, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 54/127 (42%), Gaps = 4/127 (3%) Query: 1 MKSFELYILRCIGRSFLM-SCLFIVFIAWVIQILQRIN---LVSSSTESLNILLKISGYL 56 M ++ Y+L S + L +F A + L I +S SL + + Sbjct: 1 MYIWKRYVLTKFWLSLVFLIVLAFIFYASIHHSLHAIKGNATPLASGASLKLSILYYLSQ 60 Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 I + P A+ TT L SM E+L++ +G S +L P++ + ++++ L+ Sbjct: 61 IALKAEFLIPQLVAVATTLTLFSMQNKREVLLLQASGLSLKSLTAPLIVSSFIITLLLYA 120 Query: 117 SENIIEP 123 + + P Sbjct: 121 NFQWLHP 127 >gi|304392006|ref|ZP_07373948.1| permease [Ahrensia sp. R2A130] gi|303296235|gb|EFL90593.1| permease [Ahrensia sp. R2A130] Length = 372 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 40/362 (11%), Positives = 118/362 (32%), Gaps = 36/362 (9%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + +Y+ + R+ + L F+ ++ +L+ + ++ I P + Sbjct: 5 TLSVYLAKNFLRNTMFVFLVFFFLIALVDMLELSRRTARIDDVGFFDVVSIVMLRAPVLS 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF + L +N+ EL++ +G S + P+ A ++ + + + N + Sbjct: 65 ENIVPFAVLFGASASLLLLNKRLELVVARASGVSVWQFLAPICAAAAVVGLVMGLIYNPL 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQ---------- 171 +++ ++ L + + + +I++ + + L+ Sbjct: 125 ------SLRLQASSLSLEGVVFAKNTGVTSDTTWNFWTRIARPDGDMVLRAAVAAERGKK 178 Query: 172 ----GIFIVDSRDTQTHKIYYAQSGSIDLD-------RQAIILNDGEVHRKSPISKDISI 220 +++ D +D + + A S + +L + K + + Sbjct: 179 LSGVSLYLFD-KDGKPEQRIDAASANFAEAVPGTDSLPNRYVLERANILTVGEKPKVVPV 237 Query: 221 MKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWL 280 M + +A I + ++ + L+ E +++ +H L L Sbjct: 238 MV----VPVSITAELLEIRQTSAERVSFWDLDDQAELAERAGRPPEPFQTRWHSVLALPL 293 Query: 281 FPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY 340 + ++ + R I + F ++ ++ N P++ Sbjct: 294 --LFVAMVLLAGTVSLTFARFGINGKRILTGVVAGFVLYVLTK-LVVTFGSNGLVSPVIA 350 Query: 341 LF 342 + Sbjct: 351 AW 352 >gi|15604603|ref|NP_221121.1| hypothetical protein RP769 [Rickettsia prowazekii str. Madrid E] gi|3861298|emb|CAA15197.1| unknown [Rickettsia prowazekii] gi|292572419|gb|ADE30334.1| Putative permease [Rickettsia prowazekii Rp22] Length = 362 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 29/188 (15%), Positives = 60/188 (31%), Gaps = 6/188 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K+ LY+ + + F + ++ + + I + + + + Y IP + Sbjct: 4 LKTLSLYLTKLYSKCFFIILFLLIGLLIISNIFDLLQKFKNIYVPFSFFWRFILYKIPYL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V+ L ++ ++ EL I ++G ++ + ++L I N Sbjct: 64 LSQVSSLISFTSMLFFLRNLTKSNELTAILSSGIHIWQVLIIPCIVTLILGIICTTILNP 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I L AK L + L S N +Q FI + Sbjct: 124 ISTIGLQKYSLLEAKLTKKALSECL------ISESGLLFFESLNEHNQIIQTKFIDVAEK 177 Query: 181 TQTHKIYY 188 + Sbjct: 178 KLNNITIL 185 >gi|313683045|ref|YP_004060783.1| permease yjgp/yjgq family protein [Sulfuricurvum kujiense DSM 16994] gi|313155905|gb|ADR34583.1| permease YjgP/YjgQ family protein [Sulfuricurvum kujiense DSM 16994] Length = 362 Score = 48.8 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 47/359 (13%), Positives = 112/359 (31%), Gaps = 32/359 (8%) Query: 19 SCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLT 78 + ++ ++ + + S S N++L Y + M+ P L Sbjct: 15 FSIVLIALSSFMVGFDLMENASELPHSANLVLIYIMYKYFYAVDMMLPISLTFAMIASLV 74 Query: 79 SMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQL 138 + R+ L+ + G S+ ++ P L ++ + I + + L Sbjct: 75 ELVRSNALVAYFSIGYSKARILAPFL------TMTTLLISIYIGLHATNFARANEFADNL 128 Query: 139 ALTFSYLEE--NLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDTQTHKIYYAQSGSID 195 + ++ NLFF + + YI P + + I I Q + A Sbjct: 129 RDSSEFIRPTSNLFFTHEGN-YIYFGNLYPLSKRAEDIRIFTFEKGQLKEALSASEAVYR 187 Query: 196 LDRQAIILNDGEVHR------------KSPISKDISIMK-FKSYTLQTESANSSTIVLKA 242 I + R + +++ +++ FK L + Sbjct: 188 NGFWNI--EKAHMLRPPEDFDLKGLGIVTEDKENLKVLRDFKPKILDQVYEGKVNFTITD 245 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + L+ L N N + + + +T W P++ + + Sbjct: 246 GLEALTLLKNQNVDVAKIMSGMYRMF-------ITPWFAPLLMVIFFTYTPVSSRFLNLS 298 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTKI 361 ++ + +G+ + F + + +P IL + L I ++ L + ++ Sbjct: 299 LFSFGAILATLMVWGLLFMFGELSNNKTISPEIGIILPIGLLFIVMVWRLGNPLRRVRV 357 >gi|152993636|ref|YP_001359357.1| hypothetical protein SUN_2059 [Sulfurovum sp. NBC37-1] gi|151425497|dbj|BAF73000.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1] Length = 361 Score = 48.8 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 45/366 (12%), Positives = 116/366 (31%), Gaps = 31/366 (8%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ + ++ L + F I Q + S N + Y+ L ++ Sbjct: 12 RYLAKHYIKNLLAILFGLSFAFAAIDYFQYTEELQG---SWNYKILYIFYMWQEALGLLY 68 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + + + + G ++ L PV +A L Sbjct: 69 PLAIVFAVIMTKLTFVKQNTMGALHAFGYTKKRLFSPVFVIASLTYAVFIYLHTTEFSYA 128 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDTQTH 184 + L A + ++FF+ +D ++ I K NP ++GI I Sbjct: 129 KDKANMLLKNQVHAYNVN----DMFFK-YNDTFVYIKKLNPIVKKIKGITIFKV--AGYQ 181 Query: 185 KIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN- 243 Y ++ + + I + V + ++ Y++ + + ++ K Sbjct: 182 VRYTIKAPVAVFNGEEWIAQNATVKTHIYQNGEL-----VRYSMDQKESIATLHGYKPKI 236 Query: 244 --DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 LN ++ ++ S ++ ++ + + +A + Sbjct: 237 IESLYEGKALNIIDAYNTWKLLEIQHLDS---DKIRATIYNKVIVPLFALALLLILFFKL 293 Query: 302 RKKIHPIFISLSISFGVF-----WGFSYIIHKIEQN----PYYIPILYLFLFCISSIFLL 352 + + ++F + WG + + +I N P + ++ + L + +I++ Sbjct: 294 PFHARMMNFGVVVAFSLGVTFLIWGVLFGLEQIGLNGVLKPEFTAVMPIVLLWLYAIYVY 353 Query: 353 MIKKKY 358 ++ Sbjct: 354 FTDERR 359 >gi|15834846|ref|NP_296605.1| hypothetical protein TC0226 [Chlamydia muridarum Nigg] gi|270285012|ref|ZP_06194406.1| hypothetical protein CmurN_01128 [Chlamydia muridarum Nigg] gi|270289035|ref|ZP_06195337.1| hypothetical protein CmurW_01183 [Chlamydia muridarum Weiss] gi|301336410|ref|ZP_07224612.1| hypothetical protein CmurM_01205 [Chlamydia muridarum MopnTet14] gi|7190265|gb|AAF39098.1| conserved hypothetical protein [Chlamydia muridarum Nigg] Length = 366 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 28/126 (22%), Positives = 55/126 (43%), Gaps = 3/126 (2%) Query: 1 MKSFELYILRCIGRSFL-MSCLFIVFIAWVIQILQRINL--VSSSTESLNILLKISGYLI 57 M ++ YIL S + L ++F A + L + + L + L I Sbjct: 1 MAIWKRYILARFWLSLSSLFFLAVIFYASIHHSLHAFREGKTAIAGAPLQLSLLYYLSQI 60 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 + P A+ +T L SM E+L++ +G S T+I+P++ + L+++ L+ + Sbjct: 61 SLKAEFILPQLVAIASTITLFSMQSKREILLLQASGLSLKTVIRPLILSSTLVTLLLYAN 120 Query: 118 ENIIEP 123 + P Sbjct: 121 FQWLHP 126 >gi|224373131|ref|YP_002607503.1| putative permease YjgP/YjgQ [Nautilia profundicola AmH] gi|223589255|gb|ACM92991.1| putative permease YjgP/YjgQ [Nautilia profundicola AmH] Length = 340 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 34/191 (17%), Positives = 67/191 (35%), Gaps = 9/191 (4%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 YI++ ++FL+ + F +I + + + S N+ + Y++ M P Sbjct: 5 YIIKKYAKNFLLILFSLAFFFVIIDFIANFSKLPD---SSNLQVLYLYYIVLYSFDMFYP 61 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + M + EL+ + G S ++KP L + L+ ++ R Sbjct: 62 LAIVFSFLFTMYYMIKFNELVSFYSLGFSVKKILKPFLTFSFLIFFIFIALDSGKMAYVR 121 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 + K Q + T NLF + +D + I + +D + KI Sbjct: 122 EYADSILNKRQYSNT------NLFIKFNDKIIYIKKIKPILKEAIDIRVFVLKDGKVKKI 175 Query: 187 YYAQSGSIDLD 197 A+ D Sbjct: 176 ISAKKAVFVND 186 >gi|329943109|ref|ZP_08291883.1| hypothetical protein G5Q_0788 [Chlamydophila psittaci Cal10] gi|332287691|ref|YP_004422592.1| conserved hypothetical membrane transport protein [Chlamydophila psittaci 6BC] gi|313848265|emb|CBY17266.1| conserved hypothetical membrane protein [Chlamydophila psittaci RD1] gi|325506677|gb|ADZ18315.1| conserved hypothetical membrane transport protein [Chlamydophila psittaci 6BC] gi|328814656|gb|EGF84646.1| hypothetical protein G5Q_0788 [Chlamydophila psittaci Cal10] gi|328914944|gb|AEB55777.1| YjgP/YjgQ family protein [Chlamydophila psittaci 6BC] Length = 367 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 54/127 (42%), Gaps = 4/127 (3%) Query: 1 MKSFELYILRCI-GRSFLMSCLFIVFIAWVIQILQRINLVSSS---TESLNILLKISGYL 56 M ++ Y+L + L VF A + L I ++S SL + + Sbjct: 1 MYIWKRYVLTKFWFSLVSLIVLAFVFYASIHHSLHTIKGNTTSLASGASLKLSILYYLSQ 60 Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 I + P A+ TT L SM E+L++ +G S +L P++ + ++++ L+ Sbjct: 61 IALKAEFLIPQLVAVATTITLFSMQNKREVLLLQASGLSLKSLTAPLIHSSFIITLLLYA 120 Query: 117 SENIIEP 123 + + P Sbjct: 121 NFQWLHP 127 >gi|163782560|ref|ZP_02177557.1| hypothetical protein HG1285_16790 [Hydrogenivirga sp. 128-5-R1-1] gi|159882133|gb|EDP75640.1| hypothetical protein HG1285_16790 [Hydrogenivirga sp. 128-5-R1-1] Length = 286 Score = 48.0 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 38/242 (15%), Positives = 76/242 (31%), Gaps = 20/242 (8%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 IL + R+ ++ L + FI ++QI + ++ L + P Sbjct: 6 ILWKVTRNTYITALTLAFILLMVQIFKIGFILF--GLPLTSSVPFFLVWFVYYGFFFIPD 63 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITL----IKPVLFLAILLSIFLFISENIIEP 123 + + L ++ + S + L PVLF +L +F + Sbjct: 64 GLITAVATAVYELKEKRLLHVLYSFHISPLQLLGYFALPVLFFLVLSGVFSQVLYEEHVS 123 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 R + F + E F D+ + K + L+ +F+ Sbjct: 124 FARRGL----LIQYKDRLFENMPEKTFLS-SGDVVVYAGKKD-GRELRDVFL-----KYK 172 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 A + R + G + + +M+F+ Y L TE ++ I K Sbjct: 173 DTHILADRA-VYEGRGRFLFERGSL--LTRERGKYFLMEFRRYWLDTEEFLTAEIREKRV 229 Query: 244 DQ 245 + Sbjct: 230 RR 231 >gi|157827727|ref|YP_001496791.1| putative permeases [Rickettsia bellii OSU 85-389] gi|157803031|gb|ABV79754.1| Putative permeases [Rickettsia bellii OSU 85-389] Length = 362 Score = 48.0 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 20/139 (14%), Positives = 48/139 (34%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K+ Y+ + + F + ++ + + + + + + + Y +P + Sbjct: 4 LKTLSWYLAKLYFKCFFIILFILIGLLIISNLFDLLQKFKNMYVPFDFFWRFILYKVPYL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V+ L ++ +N EL I ++G ++ + ++L I N Sbjct: 64 LNQVSALISFTSMLFFLRNLTKNNELTAILSSGIHIWQVLIIPCIVTLILGIVFTTILNP 123 Query: 121 IEPKCRSTIKQLSAKAQLA 139 I L AK Sbjct: 124 IGALGLQKYDLLEAKLTKK 142 >gi|62185347|ref|YP_220132.1| hypothetical protein CAB734 [Chlamydophila abortus S26/3] gi|62148414|emb|CAH64181.1| conserved hypothetical membrane protein [Chlamydophila abortus S26/3] Length = 367 Score = 48.0 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 54/127 (42%), Gaps = 4/127 (3%) Query: 1 MKSFELYILRCI-GRSFLMSCLFIVFIAWVIQILQRINLVSSS---TESLNILLKISGYL 56 M ++ Y+L + L VF A + L I ++S SL + + Sbjct: 1 MYIWKRYVLTKFWFSLVSLIVLAFVFYASIHHSLHTIKGNTTSLASGASLKLSILYYLAQ 60 Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 I + P A+ TT L SM E+L++ +G S +L P++ + ++++ L+ Sbjct: 61 IALKAEFLIPQLVAVATTITLFSMQNKREVLLLQASGLSLKSLTAPLIHSSFIITLLLYA 120 Query: 117 SENIIEP 123 + + P Sbjct: 121 NFQWLHP 127 >gi|315453577|ref|YP_004073847.1| putative integral membrane protein [Helicobacter felis ATCC 49179] gi|315132629|emb|CBY83257.1| putative integral membrane protein,Permease YjgP/YjgQ [Helicobacter felis ATCC 49179] Length = 355 Score = 48.0 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 53/343 (15%), Positives = 103/343 (30%), Gaps = 35/343 (10%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y L+ + LF + I LQ + + L + G L P Sbjct: 10 YYLKYCFVILMALELFFIGI----DSLQYADKFPDAANLLLLFFVYDGL---YALNYTLP 62 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + + R+ + + G S ++ P L I L + P Sbjct: 63 ISLLLGLVLFYITFIRSNQYSALLAIGYSIRQILNP--MLTINLFFIIIFVGLNATPFVY 120 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDTQTHK 185 K ++ + + ENL + ++D Y+ K NP Q I I ++ + Sbjct: 121 MQDKAMAIIYKDN--AGNVSENLLVKYNND-YVYFGKINPLLQNAQNIKIFTLKNDELSA 177 Query: 186 IYYAQSGSIDLDRQAII----------LNDGEVHRKSPISKDISIMK-FKSYTLQTESAN 234 + A + + L G+ + + +K F L T N Sbjct: 178 VAQADHAAFKDKYWTLHQATIATLPTPLGLGDQGLLVENAPLLKTLKGFHPKVLDTIYQN 237 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + + ++L L + + R L L P L +I+ A Sbjct: 238 KPAVSITDAFRSLHVLYRQHGDTKKIRGFLYVAI-----------LTPFFVPLTAILIAR 286 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP 337 + + + + + + I + WG + + K + P Sbjct: 287 YTPNLARYENLALLSLKFIILALILWGLFFALGKFSIAGLFYP 329 >gi|161505453|ref|YP_001572565.1| hypothetical protein SARI_03611 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160866800|gb|ABX23423.1| hypothetical protein SARI_03611 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 59 Score = 48.0 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 8/56 (14%), Positives = 21/56 (37%) Query: 40 SSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS 95 N++L + +P + ++ P L + +E++++ G S Sbjct: 4 VDGDIPANLVLSLLELGVPEMAQLILPLSLFPGLLMTLGKLYTESEIMVMHACGLS 59 >gi|310822423|ref|YP_003954781.1| hypothetical protein STAUR_5182 [Stigmatella aurantiaca DW4/3-1] gi|309395495|gb|ADO72954.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 373 Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 39/365 (10%), Positives = 110/365 (30%), Gaps = 15/365 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y+ R R + ++ + V+ + R + + +L++ Sbjct: 3 GTLFRYVARLYARFAVGILAALLTVFLVVDFVDRSRAYTGEGW-VLAVLELYWNKALVTT 61 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 ++ P + ++++ + E+ + +L PV +A+ + L + + Sbjct: 62 QLLGPAALLLAAGAAVSTLRKRGEVTALRALTFGPASLYLPVGAVALAACLGLIAFDERV 121 Query: 122 EPKCRSTIKQLSAKAQLALTFSYL--EENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + + +++ + L +FR + + + + + I+ Sbjct: 122 VAQASRRVDEITTQRFNRWGDWRLYYTPKQWFRRGE-HVFFLRSGSAQEGFRDVAILTLT 180 Query: 180 -DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD-ISIMKFKSYTLQTESANSST 237 D + + A + + L+ L SP + +S Y L + + Sbjct: 181 ADFKLARRLDADT-MVPLEGNRWRLTGVVERSFSPDGRTAVSAAPEAEYDLGVPARSFLI 239 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L L Y + R +P+ ++VA Sbjct: 240 RPGRPEQMRLPELREQISARTEV-GLDSRQYELALYNRFA---YPMAGLPAALVAVGLAL 295 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL----FCISSIFLLM 353 ++ + + + WG + + P L +L + + L + Sbjct: 296 RPNRKGHLTVAIVEGLLIAMAMWGLIVVSKTLVTTERMAPGLAAWLPSGVLVVVATVLWL 355 Query: 354 IKKKY 358 ++ + Sbjct: 356 RREGW 360 >gi|153875333|ref|ZP_02003182.1| conserved hypothetical protein, membrane [Beggiatoa sp. PS] gi|152068204|gb|EDN66819.1| conserved hypothetical protein, membrane [Beggiatoa sp. PS] Length = 175 Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 18/154 (11%), Positives = 55/154 (35%), Gaps = 2/154 (1%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R I ++ L + ++ I + ++ + S N + ++ + + L Sbjct: 2 IISRYLFREILQTLLALLVLLILIYISHRFMRYLVQASVGDLPANFIFQLLALRLLSDLM 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + L + ++ E+ + G + ++ ++ ++ + I ++ Sbjct: 62 LLLPLGFFLALLLALGRLYKDNEITAMAACGIPVPIIS--IIGFGVMFAVIVGIFSLLLA 119 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD 156 P + QL + + F + Sbjct: 120 PWADNQRGQLQIQLNTMAEVGGIAAGRFKEFNHG 153 >gi|297521657|ref|ZP_06940043.1| Inner membrane protein yjgQ [Escherichia coli OP50] Length = 173 Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 23/171 (13%), Positives = 58/171 (33%), Gaps = 4/171 (2%) Query: 112 IFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQ 171 + + P+ + A+A + ++ L+ + ++ ++ I + + L Sbjct: 2 LLTMAIGEWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNN-FVYIERVKGDEELG 60 Query: 172 GIFIV-DSRDTQTHKIYYAQSGSIDLDRQAIILND-GEVHRKSPISKDISIMKFKSYTLQ 229 GI I + + + + YA + D + + L+ E +P S ++ Sbjct: 61 GISIYAFNENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTN 120 Query: 230 TESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWL 280 + L + ++S L N + Y+ ++ Q L Sbjct: 121 LTPDKLGVVALDPDALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPL 170 >gi|254458642|ref|ZP_05072066.1| permease YjgP/YjgQ [Campylobacterales bacterium GD 1] gi|207084408|gb|EDZ61696.1| permease YjgP/YjgQ [Campylobacterales bacterium GD 1] Length = 355 Score = 47.3 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 44/348 (12%), Positives = 112/348 (32%), Gaps = 26/348 (7%) Query: 19 SCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLT 78 + ++ + + + SS + S N++L Y + M+ P Sbjct: 14 FSVILIALVMFLVGFDYMENASSLSSSANLVLIYLVYKAFFAIDMLLPLSLIFAMITTKI 73 Query: 79 SMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQL 138 + R+ L+ + G SR+ ++KP + ++ +I + P S + S + Sbjct: 74 FLIRSNALVSFYSLGYSRVDVLKPFVVVS--TTIIVIFVSLHAIP-SFSRADEFSNNIRK 130 Query: 139 ALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDR 198 + ++LFF D +GI + ++ ++ A+ + + Sbjct: 131 NAAYLSPTKDLFFTYKDKYIYFAQMLPLQERAEGIRVFSIKENSLKEVLVAKEATYRNES 190 Query: 199 QAIILNDGEVH-----------RKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNL 247 I D + + F+ L +K L Sbjct: 191 WHIAQADVITKPDNMSFESKGIKVDHEKGLDILHGFRPKMLDQVYEGKVNFTIKNAIDAL 250 Query: 248 SFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHP 307 L + N N + + L + + ++P + ++ + + + Sbjct: 251 LLLSDQNINTRSIKGALYKIF-----------IYPFFVPCLVVIIFFFVPISARFLNVSL 299 Query: 308 IFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 ++ + WG +++ ++ N IP + + +FL+ ++ Sbjct: 300 FSFGAILATLLVWGILFMLIELSNNKT-IPSEAGVVAPVVILFLIALR 346 >gi|301346544|ref|ZP_07227285.1| permease YjgP/YjgQ family protein [Acinetobacter baumannii AB056] Length = 164 Score = 46.9 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 52/152 (34%), Gaps = 8/152 (5%) Query: 199 QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNP 258 + L G + P + +F+SY L+ E+ + + L N+P Sbjct: 2 NVVDLVQGRRYEIFPGQPKYTQAEFQSYRLRLENDKDVKFESGDVEALSTSKLFSKANDP 61 Query: 259 NYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGV 318 RSE RL +I ++S+ ++ + ++ P + + Sbjct: 62 VV--------RSELGWRLFGPFTIIIALMLSVALSEVSPRQGRYYRLIPSIFIFASLIVL 113 Query: 319 FWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 I K E + + P+ L +++F Sbjct: 114 MIAIKTRISKGELDIWAYPVALLVYAIAAALF 145 >gi|32471812|ref|NP_864806.1| signal peptide [Rhodopirellula baltica SH 1] gi|32397183|emb|CAD72490.1| hypothetical protein-signal peptide and transmembrane prediction [Rhodopirellula baltica SH 1] Length = 413 Score = 46.5 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 48/132 (36%), Gaps = 4/132 (3%) Query: 18 MSCLFIVFIAWVIQILQRINLVSSS---TESLNILL-KISGYLIPTVLPMVTPFCFAMET 73 M L + I V ++ + + +SL ++L K G + + M M Sbjct: 1 MCFLSLAGIFIVFHAFTAMDDLIAQSKVGDSLPLVLAKFYGPYLLLLFDMTGTIITLMAF 60 Query: 74 TNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLS 133 + R EL + G S +++P++ ++ + + + P+ R ++ + Sbjct: 61 LFTAGWLRRTGELTATLSAGVSHGRILRPMIIASLAIISVQLANREWVIPRFRDSLTMKA 120 Query: 134 AKAQLALTFSYL 145 + + + Sbjct: 121 KNLSGDIEQAVM 132 >gi|297519577|ref|ZP_06937963.1| hypothetical protein EcolOP_18177 [Escherichia coli OP50] Length = 115 Score = 46.5 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 17/114 (14%), Positives = 47/114 (41%), Gaps = 6/114 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK---ISGYLIP 58 + YI + I F + + + + I++ ++ + + + L + +P Sbjct: 5 GVLDRYIGKTI---FTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVP 61 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSI 112 + + P + L + + +EL+++ +G +R+ + V+ AI L + Sbjct: 62 KDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVL 115 >gi|254669827|emb|CBA04201.1| conserved hypothetical protein [Neisseria meningitidis alpha153] Length = 210 Score = 46.5 bits (109), Expect = 0.007, Method: Composition-based stats. Identities = 29/205 (14%), Positives = 68/205 (33%), Gaps = 16/205 (7%) Query: 163 KYNPNNTLQGIFIVDSRDTQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIM 221 K P++TL GI I D + A S ++ D L + ++SI Sbjct: 15 KSGPDHTLLGIKIWARNDKNELAEAVEADSAVLNSDGS-WQLKNIRRSTLGEDKVEVSIA 73 Query: 222 KFKSYTLQTESANSSTIVLKANDQNLSFL---LNPNPNNPNYRPELLETYRSEFHKRLTQ 278 +++ + + +++K + ++ L + NN + Y + ++L Sbjct: 74 AEENWPISVKRNLMDVLLVKPDQMSVGELTTYIRHLQNNS----QNTRIYAIAWWRKLVY 129 Query: 279 WLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYY 335 + L++ R +F + + F + P+ Sbjct: 130 PAAAWVMALVAFAF--TPQTTRHGNMGLKLFGGICLGLLFHLAGRFFGFTSQLYGIPPFL 187 Query: 336 IPILYLFLFCISSIFLLMIKKKYTK 360 L F + ++ +I+K+ + Sbjct: 188 AGALPTIAFALLAV--WLIRKQEKR 210 >gi|254455252|ref|ZP_05068681.1| conserved hypothetical protein [Candidatus Pelagibacter sp. HTCC7211] gi|207082254|gb|EDZ59680.1| conserved hypothetical protein [Candidatus Pelagibacter sp. HTCC7211] Length = 325 Score = 46.1 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 53/316 (16%), Positives = 115/316 (36%), Gaps = 21/316 (6%) Query: 50 LKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAIL 109 + +S P+++ + PF F + T + N E+ I +G +++K + L ++ Sbjct: 18 IFLSLLNSPSMIFEMLPFIFLITTQLFFIKLFNNNEIEIFKYSGLKNTSILK-IFSLIVI 76 Query: 110 LSIFLFISENIIEPKCRSTI---KQLSAKAQLALTFSYLEENLFFR--LDDDLYIKISKY 164 S + ++ + + L+ + +D+ +YI S Sbjct: 77 SSGIILTIIFYNFSAVFKNFYLEEKTKFTSDSKYLAVITKNGLWIKDEIDEKIYIVNSSK 136 Query: 165 NPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKS--PISKDISI-M 221 +N L FI + D I +S I++ + +V+ K+ I K ++I Sbjct: 137 IESNFLINNFITEF-DKDYKVIRNLKSDKINIQSTDWQAFNVKVYDKNNYEIKKQLNIKT 195 Query: 222 KFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLF 281 F +QT +N S++ L L E+ + K L+ L+ Sbjct: 196 NFDYKRIQTLYSNLSSLSF----YQLFELRKNYKKLNYSLIEINLQFL----KILSFPLY 247 Query: 282 PVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWG-FSYIIHKIEQNPYYIPILY 340 + + + + R I + L S +++ +++ + I ++ Sbjct: 248 LFLVAI--FSSLIMFRVKRLHNTTFKISLGLFFSVIIYYINNFFMVMGNTERISLIFAIF 305 Query: 341 LFLFCISSIFLLMIKK 356 + L +S I LM+ K Sbjct: 306 IPLILLSIINSLMLNK 321 >gi|82523966|emb|CAI78777.1| predicted permease YjgP/YjgQ family [uncultured epsilon proteobacterium] Length = 356 Score = 46.1 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 69/193 (35%), Gaps = 8/193 (4%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 YI + FL+ + + + + + S N++L Y + M+ Sbjct: 5 KYISFHYIKYFLIILIAL---MLFLVGFDYMENAGDLSSSANLVLIYLVYKAFFAIDMLL 61 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + + R+ L+ + G SR+ +++P + ++ SI + P Sbjct: 62 PLSLVFAMVSTKIFLIRSNALVSFYSLGYSRVDVLRPFVVVS--TSIIVIFISLHALP-S 118 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDTQTH 184 S + S + + +LFF D Y+ SK P +GI + + Sbjct: 119 FSRADEYSNNIRKNAEYLSPTRDLFFTYKDQ-YVYFSKMLPLQERAEGIRVFSVINNSLQ 177 Query: 185 KIYYAQSGSIDLD 197 ++ A+S D Sbjct: 178 EVLVAKSAVYRDD 190 >gi|182413673|ref|YP_001818739.1| permease [Opitutus terrae PB90-1] gi|177840887|gb|ACB75139.1| permease [Opitutus terrae PB90-1] Length = 887 Score = 46.1 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 31/74 (41%), Gaps = 1/74 (1%) Query: 62 PMVTPFCFAMETTNVLTS-MNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +V A + + R EL + G SR L++P+L A+L++I + Sbjct: 358 LLVLGMAVANAANLLFARAVARERELAVRGALGASRWRLLRPLLVEAVLMAILAGAFALV 417 Query: 121 IEPKCRSTIKQLSA 134 + + ++ L A Sbjct: 418 LADWVDAWLRSLLA 431 >gi|78776668|ref|YP_392983.1| permease YjgP/YjgQ [Sulfurimonas denitrificans DSM 1251] gi|78497208|gb|ABB43748.1| permease YjgP/YjgQ [Sulfurimonas denitrificans DSM 1251] Length = 359 Score = 45.0 bits (105), Expect = 0.017, Method: Composition-based stats. Identities = 38/200 (19%), Positives = 69/200 (34%), Gaps = 6/200 (3%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 YI R F++ L +V + + S N+ L Y + M+ Sbjct: 5 KYITFHYIRYFIIILLALVLFLVGFDYMGNTEKLD---ISANLFLIYVVYKTFYAIDMLL 61 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P + + R+ L+ + G SRI ++KP + +A I LFIS + I Sbjct: 62 PLSLIFAMISTKIFLIRSNALVSFYSLGYSRIDILKPFVVVATA-MITLFISLHSI--SN 118 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHK 185 + + + + + +LFF D + + I + D + Sbjct: 119 FARADEFAKNIRKNAQYLSPTRDLFFTYKDKFVYFSKLLPLQESAENIRVFSFVDNSLKE 178 Query: 186 IYYAQSGSIDLDRQAIILND 205 + A+ S D I + D Sbjct: 179 VLVAKRASYRNDAWLIKMAD 198 >gi|284799561|ref|ZP_06390218.1| permease, YjgP/YjgQ family [Neisseria subflava NJ9703] gi|284797389|gb|EFC52736.1| permease, YjgP/YjgQ family [Neisseria subflava NJ9703] Length = 195 Score = 45.0 bits (105), Expect = 0.018, Method: Composition-based stats. Identities = 26/197 (13%), Positives = 70/197 (35%), Gaps = 8/197 (4%) Query: 166 PNNTLQGIFIVDSRDTQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK 224 P++TL GI I D + A+S ++ D L + ++S + Sbjct: 3 PDHTLLGIKIWQRNDKNELTQAAEAESAVLNPDGS-WQLKNIRRSILGEDKVEVSTAAEE 61 Query: 225 SYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVI 284 ++ + + +++K + ++ L ++ + + Y + ++L + + Sbjct: 62 NWPISVKRNLMDVLLVKPDQMSVGELTT-YIDHLEKNNQNTQVYAIAWWRKLVYPVAAWV 120 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYL 341 L++ R +F + + + F + P+ L Sbjct: 121 MALVAFAF--TPQTTRHGNMGLKLFGGICLGLLFHFAGRLFGFTSQLYGVPPFLAGALPT 178 Query: 342 FLFCISSIFLLMIKKKY 358 LF + +++L+ ++K Sbjct: 179 VLFALLAVYLIRRQEKR 195 >gi|330443790|ref|YP_004376776.1| YjgP/YjgQ family protein [Chlamydophila pecorum E58] gi|328806900|gb|AEB41073.1| YjgP/YjgQ family protein [Chlamydophila pecorum E58] Length = 384 Score = 45.0 bits (105), Expect = 0.020, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 53/130 (40%), Gaps = 10/130 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M ++ Y+L SF ++ LF+ FI + S I L L+ Sbjct: 18 MLIWKRYLLTKFWLSF-IALLFLAFIFYTSVHHSL--HAIKGNASFFISLSSLKLLLLYY 74 Query: 61 LP-------MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIF 113 L + P A+ T L SM E+L++ +G S +LI P++ ++++ Sbjct: 75 LSQTVLKADFLFPQLIAIAATLTLFSMQSKREVLLLQASGLSLKSLITPLIASGGIVTLI 134 Query: 114 LFISENIIEP 123 L+ + + P Sbjct: 135 LYANFQWLYP 144 >gi|88800547|ref|ZP_01116109.1| hypothetical protein MED297_15285 [Reinekea sp. MED297] gi|88776692|gb|EAR07905.1| hypothetical protein MED297_15285 [Reinekea sp. MED297] Length = 353 Score = 44.2 bits (103), Expect = 0.030, Method: Composition-based stats. Identities = 45/357 (12%), Positives = 112/357 (31%), Gaps = 6/357 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+++ + L I + +V I + T +L + + Sbjct: 1 MNIQNGYLVKQTSLMVSIVLLAIAGLLFVTGIADEAARRMTDTYTLQSAVIYKFSTLSAE 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + T + S N++ EL II + S L+ +L A++L ++ Sbjct: 61 VYEYIGVIVMLGTLITVASFNKHQELTIIQLSAASAPALLLRLLLPALILLPIVYGIGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P ++ +Q A + + +++ ++ Y+ + + L GI + Sbjct: 121 AAPSWQNNAEQARALLRGEKNPTLR--GQWYK-ANNEYVNVEFISNETELTGITRFQM-N 176 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS-STIV 239 Q + + S + +L + +++ + M S+ + + Sbjct: 177 PQKQLMAASYSKRAVYSDGSWVLINTIEVKRTERGFERKTMGISSWENAVFTPELVRNLA 236 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L++++ L L L R+ L + +++ A Sbjct: 237 LESSNLTLPELWTQ-VRFRAEAGTLTPALERTLWNRVLFPLQYIGLMFVALAFAFGSFRQ 295 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + L + G+ + P + +L F L+ ++ Sbjct: 296 KTIGDAAFKALVLGVISGLLIDTLSASLMVLAMPAFAAVLVSNSLFTGLAFYLLKRR 352 >gi|145629198|ref|ZP_01784997.1| predicted permease [Haemophilus influenzae 22.1-21] gi|144978701|gb|EDJ88424.1| predicted permease [Haemophilus influenzae 22.1-21] Length = 68 Score = 44.2 bits (103), Expect = 0.032, Method: Composition-based stats. Identities = 6/54 (11%), Positives = 23/54 (42%) Query: 33 LQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTEL 86 ++ + ++ +++ + G +PT+ ++ P C + + +E+ Sbjct: 1 MRVLGAAANGNVPADLVFSLLGLGMPTMAQLMLPLCLFIAILLTFGRLYAESEI 54 >gi|328956715|ref|YP_004374101.1| cell-division ABC transporter [Carnobacterium sp. 17-4] gi|328673039|gb|AEB29085.1| cell-division ABC transporter [Carnobacterium sp. 17-4] Length = 295 Score = 44.2 bits (103), Expect = 0.035, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 34/100 (34%) Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ ++ F + T +T +R TE+ I+ G + + P L L+ + I Sbjct: 175 IVALILTAVFLISNTIRITIFSRRTEIEIMKLVGATNWYIRWPFLIEGALIGLIGAIIPV 234 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI 159 I + F+ L N F L + Sbjct: 235 TILSFVYVASFDVLTNFLKGTYFALLTPNPFLYQVGGLML 274 >gi|325108543|ref|YP_004269611.1| permease YjgP/YjgQ family protein [Planctomyces brasiliensis DSM 5305] gi|324968811|gb|ADY59589.1| permease YjgP/YjgQ family protein [Planctomyces brasiliensis DSM 5305] Length = 374 Score = 43.4 bits (101), Expect = 0.058, Method: Composition-based stats. Identities = 12/118 (10%), Positives = 37/118 (31%), Gaps = 8/118 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSST-------ESLNILLKIS 53 + FE + R + I+ + +I + ++ + + ++ I+ Sbjct: 2 LTIFERSVFRQFLFVNAVFLCVIMGLFTIIDLFDNVDDFVNHSGEGGFPVIAMKIVGYYG 61 Query: 54 GYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLS 111 + P A+ + + R ++ + G ++ P L + + Sbjct: 62 KMGLFIFDAAAVPM-IAISLLTTMLMLKRKGQIKPFLSAGIPAYRVLTPALLCGVCVM 118 >gi|296816597|ref|XP_002848635.1| calcium P-type ATPase [Arthroderma otae CBS 113480] gi|238839088|gb|EEQ28750.1| calcium P-type ATPase [Arthroderma otae CBS 113480] Length = 765 Score = 42.6 bits (99), Expect = 0.088, Method: Composition-based stats. Identities = 12/89 (13%), Positives = 34/89 (38%), Gaps = 4/89 (4%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLV---SSSTESLNILLKISGYLIPTVLPMV 64 +L ++ I+F+ I+ L + + ++ ++ + ++ +I +P Sbjct: 500 VLAEYIAKLGLAAGLILFVVLFIKFLAHLKNIHGATAKGQAFLQIFIMAVTVIVVAVPEG 559 Query: 65 TPFCFAMETTNVLTSMNRNTELL-IIDNT 92 P + T M R+ L+ ++ Sbjct: 560 LPLAVTLALAFATTRMLRDNNLVRLLRAC 588 >gi|115379865|ref|ZP_01466928.1| hypothetical protein STIAU_7243 [Stigmatella aurantiaca DW4/3-1] gi|115363124|gb|EAU62296.1| hypothetical protein STIAU_7243 [Stigmatella aurantiaca DW4/3-1] Length = 315 Score = 42.6 bits (99), Expect = 0.088, Method: Composition-based stats. Identities = 32/289 (11%), Positives = 86/289 (29%), Gaps = 14/289 (4%) Query: 78 TSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQ 137 +++ + E+ + +L PV +A+ + L + + + + +++ + Sbjct: 20 STLRKRGEVTALRALTFGPASLYLPVGAVALAACLGLIAFDERVVAQASRRVDEITTQRF 79 Query: 138 LALTFSYL--EENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR-DTQTHKIYYAQSGSI 194 L +FR + + + + + I+ D + + A + + Sbjct: 80 NRWGDWRLYYTPKQWFRRGE-HVFFLRSGSAQEGFRDVAILTLTADFKLARRLDADT-MV 137 Query: 195 DLDRQAIILNDGEVHRKSPISKD-ISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNP 253 L+ L SP + +S Y L + + + L L Sbjct: 138 PLEGNRWRLTGVVERSFSPDGRTAVSAAPEAEYDLGVPARSFLIRPGRPEQMRLPELREQ 197 Query: 254 NPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLS 313 Y + R +P+ ++VA ++ + + Sbjct: 198 ISARTEV-GLDSRQYELALYNRFA---YPMAGLPAALVAVGLALRPNRKGHLTVAIVEGL 253 Query: 314 ISFGVFWGFSYIIHKIEQNPYYIPILYLFL----FCISSIFLLMIKKKY 358 + WG + + P L +L + + L + ++ + Sbjct: 254 LIAMAMWGLIVVSKTLVTTERMAPGLAAWLPSGVLVVVATVLWLRREGW 302 >gi|332686415|ref|YP_004456189.1| cell division protein FtsX [Melissococcus plutonius ATCC 35311] gi|332370424|dbj|BAK21380.1| cell division protein FtsX [Melissococcus plutonius ATCC 35311] Length = 294 Score = 42.6 bits (99), Expect = 0.089, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 43/125 (34%), Gaps = 4/125 (3%) Query: 42 STESLNILLKISG----YLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRI 97 S + + +I+ + + + ++ F + T +T ++R E+ I+ G Sbjct: 152 GGVSSDKIFRIAATVRTWGLAAAILLLFVAVFLISNTIRITILSRKREIHIMRLVGAKNG 211 Query: 98 TLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL 157 + P + +F I +I + L +S L+ F D L Sbjct: 212 FIRWPFFLEGAWIGLFGAIIPVVILTIGYQQFYNIFNPQLLRSNYSLLKPENFVMKIDVL 271 Query: 158 YIKIS 162 + I Sbjct: 272 MVFIG 276 >gi|306842049|ref|ZP_07474722.1| permease YjgP/YjgQ family protein [Brucella sp. BO2] gi|306287890|gb|EFM59310.1| permease YjgP/YjgQ family protein [Brucella sp. BO2] Length = 286 Score = 42.6 bits (99), Expect = 0.096, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 49/134 (36%), Gaps = 6/134 (4%) Query: 74 TNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLS 133 L S+NR EL++ + G S + P F A+L + N + S ++++ Sbjct: 1 MATLISLNRKYELVVARSVGVSAWQFLLPACFGALLFGLATIFILNPLAAHGFSKAEEIA 60 Query: 134 AKAQLAL---TFSYLEENLFFRLDDDLYIKISK--YNPNNTLQGI-FIVDSRDTQTHKIY 187 A + + + L + D+ I +K N TL FI Y Sbjct: 61 AMWKTGKVTDVSALRDPWLRQKTDEGETIIGAKSILNQGTTLADATFIQFDEQKNIKDRY 120 Query: 188 YAQSGSIDLDRQAI 201 A++ ++ + Sbjct: 121 DARTATLQDGYWEL 134 >gi|320088912|emb|CBY98670.1| Lipopolysaccharide export system permease protein lptG [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 220 Score = 42.6 bits (99), Expect = 0.10, Method: Composition-based stats. Identities = 35/216 (16%), Positives = 73/216 (33%), Gaps = 9/216 (4%) Query: 146 EENLFFRLDDDLYIKISKYNPNNTLQGIFIV---DSRDTQTHKIYYAQSGSIDLDRQAII 202 ++ L+ + ++ ++ I + + L GI I D R + + YA S D + + Sbjct: 9 QQGLWAKDGNN-FVYIERVKGDEELAGISIYAFNDQR--RLQSVRYAASAKFDPEHKVWR 65 Query: 203 LND-GEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYR 261 L+ E ++P S ++ + L + ++S L N Sbjct: 66 LSQVDESDLQNPKQITGSQTVSGTWKTNLTPDKLGVVALDPDALSISGLHN-YVKYLKSS 124 Query: 262 PELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVF-W 320 + Y+ ++ Q L + L+++ IS F V Sbjct: 125 GQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPMGVRVVTGISFGFVFYVLDQ 184 Query: 321 GFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 F + P +L F + S++L++ K Sbjct: 185 IFGPLTLVYGIPPIVGALLPSASFFLISLWLMLRKS 220 >gi|326479225|gb|EGE03235.1| P-type calcium ATPase [Trichophyton equinum CBS 127.97] Length = 1314 Score = 41.9 bits (97), Expect = 0.14, Method: Composition-based stats. Identities = 11/89 (12%), Positives = 34/89 (38%), Gaps = 4/89 (4%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLV---SSSTESLNILLKISGYLIPTVLPMV 64 +L ++ ++F+ I+ L + + ++ ++ + ++ +I +P Sbjct: 500 VLAEYIAKLGLTAGLVLFVVLFIKFLVHLKTIQGATAKGQAFLQIFIMAVTVIVVAVPEG 559 Query: 65 TPFCFAMETTNVLTSMNRNTELL-IIDNT 92 P + T M R+ L+ ++ Sbjct: 560 LPLAVTLALAFATTRMLRDNNLVRLLRAC 588 >gi|315049901|ref|XP_003174325.1| calcium-transporting ATPase [Arthroderma gypseum CBS 118893] gi|311342292|gb|EFR01495.1| calcium-transporting ATPase [Arthroderma gypseum CBS 118893] Length = 1405 Score = 41.9 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 12/89 (13%), Positives = 34/89 (38%), Gaps = 4/89 (4%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLV---SSSTESLNILLKISGYLIPTVLPMV 64 +L ++ I+F+ I+ L + + ++ ++ + ++ +I +P Sbjct: 501 VLAEYIAKLGLTAGLILFVVLFIKFLVHLKNIQGATAKGQAFLQIFIMAVTVIVVAVPEG 560 Query: 65 TPFCFAMETTNVLTSMNRNTELL-IIDNT 92 P + T M R+ L+ ++ Sbjct: 561 LPLAVTLALAFATTRMLRDNNLVRLLRAC 589 >gi|116626043|ref|YP_828199.1| hypothetical protein Acid_7001 [Candidatus Solibacter usitatus Ellin6076] gi|116229205|gb|ABJ87914.1| protein of unknown function DUF214 [Candidatus Solibacter usitatus Ellin6076] Length = 751 Score = 41.5 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 35/101 (34%), Gaps = 2/101 (1%) Query: 43 TESLNILLKISGYLIPTVLPMVTPFCFA--METTNVLTSMNRNTELLIIDNTGTSRITLI 100 + + +L+ + M+ + + R E+ I G +R L Sbjct: 234 GQGGDDYRMFVFFLMLLGIAMILALIACSNVAGLLLARRAARFREMTIRQALGANRWQLA 293 Query: 101 KPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALT 141 +P+L A++L S ++ RS ++ L + Sbjct: 294 RPLLGEALVLVACGAASGLALDAWLRSHLRYLRWPTAYNIP 334 >gi|302658490|ref|XP_003020948.1| hypothetical protein TRV_04942 [Trichophyton verrucosum HKI 0517] gi|291184820|gb|EFE40330.1| hypothetical protein TRV_04942 [Trichophyton verrucosum HKI 0517] Length = 1404 Score = 41.5 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 32/83 (38%), Gaps = 3/83 (3%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLV---SSSTESLNILLKISGYLIPTVLPMV 64 +L ++ ++F+ I+ L + + ++ ++ + ++ +I +P Sbjct: 500 VLAEYIAKLGLTAGLVLFVVLFIKFLVHLKNIQGATAKGQAFLQIFIMAVTVIVVAVPEG 559 Query: 65 TPFCFAMETTNVLTSMNRNTELL 87 P + T M R+ L+ Sbjct: 560 LPLAVTLALAFATTRMLRDNNLV 582 >gi|302497890|ref|XP_003010944.1| hypothetical protein ARB_02842 [Arthroderma benhamiae CBS 112371] gi|291174490|gb|EFE30304.1| hypothetical protein ARB_02842 [Arthroderma benhamiae CBS 112371] Length = 1404 Score = 41.5 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 32/83 (38%), Gaps = 3/83 (3%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLV---SSSTESLNILLKISGYLIPTVLPMV 64 +L ++ ++F+ I+ L + + ++ ++ + ++ +I +P Sbjct: 500 VLAEYIAKLGLTAGLVLFVVLFIKFLVHLKNIQGATAKGQAFLQIFIMAVTVIVVAVPEG 559 Query: 65 TPFCFAMETTNVLTSMNRNTELL 87 P + T M R+ L+ Sbjct: 560 LPLAVTLALAFATTRMLRDNNLV 582 >gi|319956049|ref|YP_004167312.1| permease yjgp/yjgq family protein [Nitratifractor salsuginis DSM 16511] gi|319418453|gb|ADV45563.1| permease YjgP/YjgQ family protein [Nitratifractor salsuginis DSM 16511] Length = 372 Score = 41.5 bits (96), Expect = 0.23, Method: Composition-based stats. Identities = 51/371 (13%), Positives = 121/371 (32%), Gaps = 32/371 (8%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K LYI R ++FL+ + + I LQ+ + N + + Y ++ Sbjct: 5 KRTFLYIARHYLKNFLILLIGLSLAVVFIDFLQQAQRLHGG---ANRKILYAFYTWEYMV 61 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 ++ P M S + + + G R ++ P L +L+ + + Sbjct: 62 ALIYPLVILMAMAWTQISFIYRNVFVSLFSFGFGRRQILIPFLASGVLIYLVFTGLQMTS 121 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSRD 180 + + + + + NLFF+ +D ++ S+ +P + L I + + Sbjct: 122 FAYGQDRARMILHADRYKDALN----NLFFK-YNDSFVYASRLDPLHKALLRGMIFEVKK 176 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEV------HRKSPISKDISIMKFKSYTLQ---TE 231 Q + +DGE R + + F+ L+ Sbjct: 177 NQVVRTLRFDEARF---------HDGEWIAPRALVRSKRFDTEGELTGFEDKELKNMILL 227 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELL--ETYRSEFHKRLTQWLFPVIFGLIS 289 + K + L++ + + L + ++ + ++ LF + +I Sbjct: 228 KGYRPKVFRKIYEGGTFSLVDSLAALHLLKKQGLSADKVKAILYNKVLTPLFALAMMVI- 286 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 + L + + ++ +L S + W + + ++ N P L L + I Sbjct: 287 --FFYRTPLYHRFVRKEQLWTALLGSALLTWALLFALFRLGMNGVIDPDLGQTLPILILI 344 Query: 350 FLLMIKKKYTK 360 + + Sbjct: 345 LYAWRLDRRIR 355 >gi|327293840|ref|XP_003231616.1| P-type calcium ATPase [Trichophyton rubrum CBS 118892] gi|326466244|gb|EGD91697.1| P-type calcium ATPase [Trichophyton rubrum CBS 118892] Length = 1404 Score = 41.1 bits (95), Expect = 0.24, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 32/83 (38%), Gaps = 3/83 (3%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLV---SSSTESLNILLKISGYLIPTVLPMV 64 +L ++ ++F+ I+ L + + ++ ++ + ++ +I +P Sbjct: 500 VLAEYIAKLGLTAGLVLFVVLFIKFLVHLKNIQGATAKGQAFLQIFIMAVTVIVVAVPEG 559 Query: 65 TPFCFAMETTNVLTSMNRNTELL 87 P + T M R+ L+ Sbjct: 560 LPLAVTLALAFATTRMLRDNNLV 582 >gi|182413695|ref|YP_001818761.1| permease [Opitutus terrae PB90-1] gi|177840909|gb|ACB75161.1| permease [Opitutus terrae PB90-1] Length = 817 Score = 41.1 bits (95), Expect = 0.25, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 37/88 (42%), Gaps = 1/88 (1%) Query: 46 LNILLKISGYLIPTVLPMVTPFCFA-METTNVLTSMNRNTELLIIDNTGTSRITLIKPVL 104 + L + G L ++ +V A + ++ R EL++ G SR +++ +L Sbjct: 276 MADLAPVIGCLFTGLVLLVLFIACANVANLMGSHALAREKELVVRAALGASRWRIVRLLL 335 Query: 105 FLAILLSIFLFISENIIEPKCRSTIKQL 132 ++LL++ I + ++ L Sbjct: 336 AESVLLAVLAGIVGYSLAWWGGDAMRSL 363 >gi|326406517|gb|ADZ63588.1| cell division transport system permease protein [Lactococcus lactis subsp. lactis CV56] Length = 311 Score = 41.1 bits (95), Expect = 0.26, Method: Composition-based stats. Identities = 13/102 (12%), Positives = 29/102 (28%) Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ F + T +T ++R E+ I+ G + P + + I + Sbjct: 192 ILLIFVAVFLISNTIRITILSRQREIQIMRLVGAKNGYIRWPFFLEGAWVGLLGSIIPGL 251 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS 162 I + + + F L I Sbjct: 252 IVAWAYRLAFVSLTPSLQSQKLAMFAPKEFIPAIVGLMALIG 293 >gi|261193861|ref|XP_002623336.1| ferro-O2-oxidoreductase [Ajellomyces dermatitidis SLH14081] gi|239588941|gb|EEQ71584.1| ferro-O2-oxidoreductase [Ajellomyces dermatitidis SLH14081] Length = 654 Score = 41.1 bits (95), Expect = 0.26, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 52/178 (29%), Gaps = 24/178 (13%) Query: 87 LIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLS-AKAQLALTFSYL 145 G SR L V+FL +++S + P S + L + Q L Sbjct: 32 TSSQAAGWSRSYLASVVIFLVLVVSFLGALRIPRSPPYYSSQNRVLGPTQQQQHPGAQRL 91 Query: 146 EE-----NLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSG--SIDLDR 198 + + + P+ L+ I++V+ + + A+SG I R Sbjct: 92 HPEAHIYRTVRTIRLNWTVTAGYRRPDGVLKRIYLVNGQFPG--PVVEARSGDRLIVDVR 149 Query: 199 QAIILNDGEVHRKSPISKDISIMKFK--------------SYTLQTESANSSTIVLKA 242 + VH +D + M Y + S T A Sbjct: 150 NGLEDEGVSVHWHGLHMRDANRMDGTVGVTQCAINPGDSFRYDFTISDSQSGTYWYHA 207 >gi|327350083|gb|EGE78940.1| ferro-O2-oxidoreductase [Ajellomyces dermatitidis ATCC 18188] Length = 654 Score = 41.1 bits (95), Expect = 0.26, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 52/178 (29%), Gaps = 24/178 (13%) Query: 87 LIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLS-AKAQLALTFSYL 145 G SR L V+FL +++S + P S + L + Q L Sbjct: 32 TSSQAAGWSRSYLASVVIFLVLVVSFLGALRIPRSPPYYSSQNRVLGPTQQQQHPGAQRL 91 Query: 146 EE-----NLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSG--SIDLDR 198 + + + P+ L+ I++V+ + + A+SG I R Sbjct: 92 HPEAHIYRTVRTIRLNWTVTAGYRRPDGVLKRIYLVNGQFPG--PVVEARSGDRLIVDVR 149 Query: 199 QAIILNDGEVHRKSPISKDISIMKFK--------------SYTLQTESANSSTIVLKA 242 + VH +D + M Y + S T A Sbjct: 150 NGLEDEGVSVHWHGLHMRDANRMDGTVGVTQCAINPGDSFRYDFTISDSQSGTYWYHA 207 >gi|239613741|gb|EEQ90728.1| ferro-O2-oxidoreductase [Ajellomyces dermatitidis ER-3] Length = 654 Score = 41.1 bits (95), Expect = 0.26, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 52/178 (29%), Gaps = 24/178 (13%) Query: 87 LIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLS-AKAQLALTFSYL 145 G SR L V+FL +++S + P S + L + Q L Sbjct: 32 TSSQAAGWSRSYLASVVIFLVLVVSFLGALRIPRSPPYYSSQNRVLGPTQQQQHPGAQRL 91 Query: 146 EE-----NLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSG--SIDLDR 198 + + + P+ L+ I++V+ + + A+SG I R Sbjct: 92 HPEAHIYRTVRTIRLNWTVTAGYRRPDGVLKRIYLVNGQFPG--PVVEARSGDRLIVDVR 149 Query: 199 QAIILNDGEVHRKSPISKDISIMKFK--------------SYTLQTESANSSTIVLKA 242 + VH +D + M Y + S T A Sbjct: 150 NGLEDEGVSVHWHGLHMRDANRMDGTVGVTQCAINPGDSFRYDFTISDSQSGTYWYHA 207 >gi|15672955|ref|NP_267129.1| cell division protein [Lactococcus lactis subsp. lactis Il1403] gi|12723913|gb|AAK05071.1|AE006331_11 cell division protein [Lactococcus lactis subsp. lactis Il1403] Length = 311 Score = 41.1 bits (95), Expect = 0.28, Method: Composition-based stats. Identities = 13/102 (12%), Positives = 29/102 (28%) Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ F + T +T ++R E+ I+ G + P + + I + Sbjct: 192 ILLIFVAVFLISNTIRITILSRQREIQIMRLVGAKNGYIRWPFFLEGAWVGLLGSIIPGL 251 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS 162 I + + + F L I Sbjct: 252 IVAWAYRLAFVSLTPSLQSQKLAMFAPKEFIPAIVGLMAVIG 293 >gi|326474233|gb|EGD98242.1| P-type calcium ATPase [Trichophyton tonsurans CBS 112818] Length = 1214 Score = 41.1 bits (95), Expect = 0.31, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 32/83 (38%), Gaps = 3/83 (3%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLV---SSSTESLNILLKISGYLIPTVLPMV 64 +L ++ ++F+ I+ L + + ++ ++ + ++ +I +P Sbjct: 474 VLAEYIAKLGLTAGLVLFVVLFIKFLVHLKTIQGATAKGQAFLQIFIMAVTVIVVAVPEG 533 Query: 65 TPFCFAMETTNVLTSMNRNTELL 87 P + T M R+ L+ Sbjct: 534 LPLAVTLALAFATTRMLRDNNLV 556 >gi|187933306|ref|YP_001885579.1| ABC transporter permease [Clostridium botulinum B str. Eklund 17B] gi|187721459|gb|ACD22680.1| putative ABC transporter permease protein [Clostridium botulinum B str. Eklund 17B] Length = 465 Score = 41.1 bits (95), Expect = 0.31, Method: Composition-based stats. Identities = 14/139 (10%), Positives = 48/139 (34%), Gaps = 24/139 (17%) Query: 40 SSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITL 99 S+ ++ + + +++ ++ N L+ R E+ ++ G + + Sbjct: 299 VEGLSSITLMFVLVVLGLGSIILVLL---------NTLSIKERKYEIGVLRAIGMKKWKV 349 Query: 100 IKPVLFLAILLSIFLF-----ISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLD 154 ++ A+++++ + + +P + +++ A + A + Sbjct: 350 ASGLISEALMVTVICLGIGIGVGSIVAQPVSNTLLQKQIASQKEAQ----------NKPT 399 Query: 155 DDLYIKISKYNPNNTLQGI 173 + I N L+ I Sbjct: 400 NGFMITTGNSNGETDLETI 418 >gi|255994600|ref|ZP_05427735.1| conserved hypothetical protein [Eubacterium saphenum ATCC 49989] gi|255993313|gb|EEU03402.1| conserved hypothetical protein [Eubacterium saphenum ATCC 49989] Length = 401 Score = 40.7 bits (94), Expect = 0.36, Method: Composition-based stats. Identities = 11/62 (17%), Positives = 28/62 (45%) Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ ++ + L + E++I G +R + P++ L IL+ + F++ Sbjct: 302 IILLMVSILIFLAIIISLYKVTFEEEIIIKRFMGHNRARIYSPIVILCILVLVLDFVASQ 361 Query: 120 II 121 +I Sbjct: 362 VI 363 >gi|163789838|ref|ZP_02184274.1| cell division ABC transporter, permease protein FtsX [Carnobacterium sp. AT7] gi|159874778|gb|EDP68846.1| cell division ABC transporter, permease protein FtsX [Carnobacterium sp. AT7] Length = 295 Score = 40.7 bits (94), Expect = 0.37, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 34/100 (34%) Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ ++ F + T +T +R TE+ I+ G + + P L L+ + I Sbjct: 175 IVALILTAVFLISNTIRITIFSRRTEIEIMKLVGATNWYIRWPFLIEGALIGLVGAIIPV 234 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI 159 I T + F L N F L + Sbjct: 235 AILSFVYVTAYGIGTDFLKGTYFGLLAPNPFLYQVGGLML 274 >gi|182413709|ref|YP_001818775.1| permease [Opitutus terrae PB90-1] gi|177840923|gb|ACB75175.1| permease [Opitutus terrae PB90-1] Length = 798 Score = 40.3 bits (93), Expect = 0.41, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 44/103 (42%), Gaps = 2/103 (1%) Query: 33 LQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNT 92 L+ ++L SS+ + + + + + ++ C + + +++R E + Sbjct: 248 LRAVDLQSSTMQPGTDVATLMLLGLAGFVLLI--VCGNLANLQMARALSRTREFAVRAAL 305 Query: 93 GTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAK 135 G SR L++P+L + +L++ ++ + I A+ Sbjct: 306 GASRSHLLRPLLLESTMLALAGGALGVLVTVWGNAWISSQIAQ 348 >gi|87307122|ref|ZP_01089268.1| hypothetical protein DSM3645_01675 [Blastopirellula marina DSM 3645] gi|87290495|gb|EAQ82383.1| hypothetical protein DSM3645_01675 [Blastopirellula marina DSM 3645] Length = 480 Score = 40.3 bits (93), Expect = 0.42, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 45/96 (46%), Gaps = 9/96 (9%) Query: 26 IAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTE 85 + V++I L+ S ++L +++ + ++ +V+ + N + +R E Sbjct: 306 VLPVLEISNLFELIVSPIQTLLLVITV-------MICIVSGISILVSIYNSMN--DRKHE 356 Query: 86 LLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + ++ G SR T++ +L +++LS+ + + Sbjct: 357 IAVMRALGASRGTVMMVILLESVILSVGGGLIGWFV 392 >gi|242309279|ref|ZP_04808434.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] gi|239524320|gb|EEQ64186.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] Length = 269 Score = 40.3 bits (93), Expect = 0.42, Method: Composition-based stats. Identities = 39/277 (14%), Positives = 94/277 (33%), Gaps = 17/277 (6%) Query: 91 NTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLF 150 G S+ + P+ +A L++ P + K + L + +LF Sbjct: 2 ALGYSKSRIFLPIFSIAFLIA--SAFVLLNATPFAYAKEKVDLIVERGYLGSY--KSDLF 57 Query: 151 FRLDDDLYIKISKYNPN-NTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVH 209 + D++ YI +K P + +GI + + + + +I A + + IL + ++ Sbjct: 58 IKYDNN-YIYFAKIFPLLQSAEGIQVFEVENEEVLRIIEAPKATFNEGE--WILENAKIT 114 Query: 210 RKSP----ISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFL-LNPNPNNPNYRPEL 264 P + + + K Y + ++S + N + Sbjct: 115 TIQPQLEVGKNPLWVEEQKVYKTLVGFKPKILDNIYEKQGSISIVDAFEAMNLLEGQNIN 174 Query: 265 LETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSY 324 + R+ + L LFP L+ + + + + I + + + V WG + Sbjct: 175 TQKLRASLYVLL---LFPFFAPLMMVCLSGFTPNSNRYANLGGITLGMILGILVVWGILF 231 Query: 325 IIHKIEQNPYYIP-ILYLFLFCISSIFLLMIKKKYTK 360 ++ + + P + I ++ + + K Sbjct: 232 SFSRLSMSGFLQPEFSVIMPIGILALISAWLFVRLLK 268 >gi|218460845|ref|ZP_03500936.1| putative permease protein [Rhizobium etli Kim 5] Length = 86 Score = 40.3 bits (93), Expect = 0.49, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Query: 309 FISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC--ISSIFLLMIKKK 357 +L +F + W Y ++I+ +P YI +LY I SI L + K+ Sbjct: 1 MSALGYAFALRWAAFYAANQIDTDPEYIAVLYALPIVSSIVSIIFLSLHKR 51 >gi|210621280|ref|ZP_03292572.1| hypothetical protein CLOHIR_00515 [Clostridium hiranonis DSM 13275] gi|210154829|gb|EEA85835.1| hypothetical protein CLOHIR_00515 [Clostridium hiranonis DSM 13275] Length = 1081 Score = 40.3 bits (93), Expect = 0.49, Method: Composition-based stats. Identities = 11/97 (11%), Positives = 36/97 (37%), Gaps = 5/97 (5%) Query: 31 QILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF-CFAMETTNVLTSMNRNTELLII 89 +++ ++V S S+ ++ Y++ + + + ++ + R E+ ++ Sbjct: 926 KVISYTDMVGSLMSSVTSIINSISYILVAFVAISLVVSSIMIGVITYISVLERKKEIGVL 985 Query: 90 DNTGTSRITLIKPV----LFLAILLSIFLFISENIIE 122 G S+ + + + L I + I+ Sbjct: 986 RAIGASKRNISQVFNAETFIIGALAGIIGIVVSLILI 1022 >gi|322385193|ref|ZP_08058840.1| cell division protein FtsX [Streptococcus cristatus ATCC 51100] gi|321270817|gb|EFX53730.1| cell division protein FtsX [Streptococcus cristatus ATCC 51100] Length = 308 Score = 40.3 bits (93), Expect = 0.50, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 45/107 (42%), Gaps = 2/107 (1%) Query: 45 SLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVL 104 +L+ +++ G + +L + F + T +T ++R+ E+ I+ G + P L Sbjct: 175 ALSDFIRVWGLVGAGLLIFIAVF--LISNTIRITIISRSREIQIMRLVGAKNSYIRGPFL 232 Query: 105 FLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFF 151 F + + + ++ + Q K +A S +E +LF Sbjct: 233 FEGAWIGLLGSVLPVVLVYFGYNMAYQTMNKNLVAQNLSMIEPHLFV 279 >gi|320010355|gb|ADW05205.1| protein of unknown function DUF214 [Streptomyces flavogriseus ATCC 33331] Length = 860 Score = 39.9 bits (92), Expect = 0.60, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 34/83 (40%), Gaps = 3/83 (3%) Query: 37 NLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSM--NRNTELLIIDNTGT 94 +S+ +S+ L + Y + + + N + + R E+ ++ G+ Sbjct: 252 EAAASNKDSMGSFLDVMKYAMLGFAGIAFLVGIFL-IVNTFSMLVAQRTREIGLMRAIGS 310 Query: 95 SRITLIKPVLFLAILLSIFLFIS 117 SR + + VL A+LL + + Sbjct: 311 SRKQVNRSVLVEAVLLGVVGSVL 333 >gi|326778848|ref|ZP_08238113.1| protein of unknown function DUF214 [Streptomyces cf. griseus XylebKG-1] gi|326659181|gb|EGE44027.1| protein of unknown function DUF214 [Streptomyces cf. griseus XylebKG-1] Length = 861 Score = 39.9 bits (92), Expect = 0.62, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 30/75 (40%), Gaps = 3/75 (4%) Query: 45 SLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSM--NRNTELLIIDNTGTSRITLIKP 102 S+ L + Y + + + N + + R E+ ++ G+SR + + Sbjct: 260 SMGSFLDVMKYAMLGFAGIAFLVGIFL-IVNTFSMLVAQRTREIGLMRAIGSSRKQVNRS 318 Query: 103 VLFLAILLSIFLFIS 117 VL A+LL I + Sbjct: 319 VLVEAVLLGIVGSVL 333 >gi|182438199|ref|YP_001825918.1| putative ABC transporter permease protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|178466715|dbj|BAG21235.1| putative ABC transporter permease protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 861 Score = 39.9 bits (92), Expect = 0.62, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 30/75 (40%), Gaps = 3/75 (4%) Query: 45 SLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSM--NRNTELLIIDNTGTSRITLIKP 102 S+ L + Y + + + N + + R E+ ++ G+SR + + Sbjct: 260 SMGSFLDVMKYAMLGFAGIAFLVGIFL-IVNTFSMLVAQRTREIGLMRAIGSSRKQVNRS 318 Query: 103 VLFLAILLSIFLFIS 117 VL A+LL I + Sbjct: 319 VLVEAVLLGIVGSVL 333 >gi|297157745|gb|ADI07457.1| ABC transport system integral membrane protein [Streptomyces bingchenggensis BCW-1] Length = 859 Score = 39.9 bits (92), Expect = 0.67, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 29/74 (39%), Gaps = 3/74 (4%) Query: 46 LNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSM--NRNTELLIIDNTGTSRITLIKPV 103 + L I Y + + + N + + R E+ ++ G+SR + + V Sbjct: 259 IGSFLDIMKYAMLGFAGIAVLVGIFL-IVNTFSMLVAQRTREIGLMRAIGSSRKQVNRSV 317 Query: 104 LFLAILLSIFLFIS 117 L A+LL + + Sbjct: 318 LIEALLLGVVGSVL 331 >gi|163840104|ref|YP_001624509.1| cell division protein [Renibacterium salmoninarum ATCC 33209] gi|162953580|gb|ABY23095.1| cell division protein [Renibacterium salmoninarum ATCC 33209] Length = 304 Score = 39.6 bits (91), Expect = 0.76, Method: Composition-based stats. Identities = 17/118 (14%), Positives = 43/118 (36%), Gaps = 5/118 (4%) Query: 32 ILQRINLVSSSTESLNILLK----ISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELL 87 + ++ V ++L L + ++ + L M+ + TT L++ +R E Sbjct: 154 SVPGVDQVVDQRKALEPLFEVMNRLTAVAVGVALVMILTAWLLIATTIRLSAFSRRRETG 213 Query: 88 IIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYL 145 I+ G S+ + P + ++ ++ + I A A + + + Sbjct: 214 IMRLVGASKTVIQLPFIMEGVISAVIGAGIA-WLAIWGSIKIFVEGASAANQQSIALI 270 >gi|322699738|gb|EFY91497.1| P-type calcium ATPase [Metarhizium acridum CQMa 102] Length = 1282 Score = 39.6 bits (91), Expect = 0.87, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 24/80 (30%), Gaps = 5/80 (6%) Query: 13 GRSFLMSCLFIVFIAWVIQILQRINLVSSSTES--LNILLKISGYLIPTVLPMV---TPF 67 F I F+ I+ L + ++S S I I V+ V Sbjct: 364 LIVFGAVVGAIFFVILFIRYLVLLKWMASKGPSNKAEAFFHILILSITVVIITVPEGLAL 423 Query: 68 CFAMETTNVLTSMNRNTELL 87 + T M R+ L+ Sbjct: 424 NVTVALAFATTRMLRDNNLV 443 >gi|227494929|ref|ZP_03925245.1| cell division protein FtsX [Actinomyces coleocanis DSM 15436] gi|226831381|gb|EEH63764.1| cell division protein FtsX [Actinomyces coleocanis DSM 15436] Length = 304 Score = 39.6 bits (91), Expect = 0.88, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 2/70 (2%) Query: 51 KISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILL 110 K + V+ + + TT L++M R E I+ G S +T+ P + + Sbjct: 179 KFLSLALAGVMTVAA--VLLITTTIRLSAMAREKETTIMRFVGASSLTIQLPFMIEGAIA 236 Query: 111 SIFLFISENI 120 ++ I + Sbjct: 237 ALTGAILAVV 246 >gi|302534857|ref|ZP_07287199.1| ABC transporter integral membrane protein [Streptomyces sp. C] gi|302443752|gb|EFL15568.1| ABC transporter integral membrane protein [Streptomyces sp. C] Length = 849 Score = 39.2 bits (90), Expect = 1.00, Method: Composition-based stats. Identities = 12/95 (12%), Positives = 28/95 (29%), Gaps = 5/95 (5%) Query: 56 LIPTVLPMVTPFCFAMETTNVLTSM-----NRNTELLIIDNTGTSRITLIKPVLFLAILL 110 + +L + + + R EL ++ G +R +I+ VL A+++ Sbjct: 266 SMSNMLLAFAGISLFVGVFLIYNTFTMLVAQRTRELALLRAVGANRGQVIRSVLAEALVV 325 Query: 111 SIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYL 145 ++ L + L Sbjct: 326 GALSAAIGLAAGVGLAVGMRSLMDTIGAKIPAGDL 360 >gi|262375761|ref|ZP_06068993.1| lipoprotein release ABC transporter permease [Acinetobacter lwoffii SH145] gi|262309364|gb|EEY90495.1| lipoprotein release ABC transporter permease [Acinetobacter lwoffii SH145] Length = 407 Score = 39.2 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 42/94 (44%), Gaps = 10/94 (10%) Query: 28 WVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELL 87 W+ Q +N +++ + S N++ ++ + F + + ++ + R E+ Sbjct: 265 WIETNAQLMNAITAQSLSTNMI----------IVFVAISVAFGIASVMSVSVVQRTREIG 314 Query: 88 IIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 I+ TG ++ +++ LF + + + +I+ Sbjct: 315 ILRATGATQSQILRVFLFQGAIFGLLGSVLGSIV 348 >gi|257457657|ref|ZP_05622824.1| conserved hypothetical protein [Treponema vincentii ATCC 35580] gi|257445043|gb|EEV20119.1| conserved hypothetical protein [Treponema vincentii ATCC 35580] Length = 116 Score = 39.2 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 14/103 (13%), Positives = 37/103 (35%), Gaps = 2/103 (1%) Query: 255 PNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSI 314 + +L Y EFHK+ + F L++ + + Q + Sbjct: 13 KQTQDEDKRILNLYWMEFHKKFSIPFGAFFFVLLAFAISSAGKVHNQGAGFFLGLLIAVA 72 Query: 315 SFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + +F G + ++ N +++ + + ++++ KK Sbjct: 73 YWALFMGGQTLCLRLNWNGTSA--MWVPNIMVFAASVVLLGKK 113 >gi|322388281|ref|ZP_08061885.1| cell division protein FtsX [Streptococcus infantis ATCC 700779] gi|321140953|gb|EFX36454.1| cell division protein FtsX [Streptococcus infantis ATCC 700779] Length = 308 Score = 39.2 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 20/117 (17%), Positives = 43/117 (36%), Gaps = 2/117 (1%) Query: 46 LNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLF 105 L +++ G +I +L + F + T +T ++R+ E+ I+ G + P L Sbjct: 176 LASFIRVWGLVIAGLLIFIAVF--LISNTIRITIISRSREIQIMRLVGAKNGYIRGPFLL 233 Query: 106 LAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS 162 + + + + + + Q + + S + N F L L I Sbjct: 234 EGAFIGLLGAALPSALVYFIYNRVFQSVNPSLVGQNLSLITPNTFIPLMIGLLFLIG 290 >gi|313899491|ref|ZP_07833001.1| efflux ABC transporter, permease protein [Clostridium sp. HGF2] gi|312955779|gb|EFR37437.1| efflux ABC transporter, permease protein [Clostridium sp. HGF2] Length = 497 Score = 39.2 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 16/142 (11%), Positives = 49/142 (34%), Gaps = 13/142 (9%) Query: 37 NLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSR 96 V++ +SL L +S Y + ++ + N+ R E+ ++ G ++ Sbjct: 313 EDVAAYEQSLAPLENLSTYAGYFLAVVLLVGGVILVVLNIYHIRERKYEIGVLAAIGMNK 372 Query: 97 ITLIKPVLFLAILLSIFLFISENII-----EPKCRSTIKQLSAKAQLALTFSYLEEN--- 148 + + +++++ + I P + ++ + + A + +E Sbjct: 373 RRIALQFICEILIVTLMAIMLGCGIGAAASVPLTNTLLQTQTVQTSAAQETDFPKEGGPQ 432 Query: 149 -LFFRLDDDL---YI-KISKYN 165 F + + I + + Sbjct: 433 IEFGGRSKGMEKETVSYIQEIS 454 >gi|309800016|ref|ZP_07694215.1| cell division ABC transporter, permease protein FtsX [Streptococcus infantis SK1302] gi|308116367|gb|EFO53844.1| cell division ABC transporter, permease protein FtsX [Streptococcus infantis SK1302] Length = 308 Score = 39.2 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 44/117 (37%), Gaps = 2/117 (1%) Query: 46 LNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLF 105 L +++ G +I +L + F + T +T ++R+ E+ I+ G + P L Sbjct: 176 LASFIRVWGLVIAGLLIFIAVF--LISNTIRITIISRSREIQIMRLVGAKNSYIRGPFLL 233 Query: 106 LAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS 162 + + +++ + + Q + + S + + F L L I Sbjct: 234 EGAFIGLLGAALPSVLVYFIYNRVFQSVNPSLVGQNLSLITPDTFIPLMIGLLFLIG 290 >gi|307324331|ref|ZP_07603539.1| protein of unknown function DUF214 [Streptomyces violaceusniger Tu 4113] gi|306890062|gb|EFN21040.1| protein of unknown function DUF214 [Streptomyces violaceusniger Tu 4113] Length = 856 Score = 38.8 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 29/75 (38%), Gaps = 3/75 (4%) Query: 45 SLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSM--NRNTELLIIDNTGTSRITLIKP 102 + L + Y + + + N + + R E+ ++ G+SR + + Sbjct: 256 GIGSFLDVMKYAMLGFAGIAVLVGIFL-IVNTFSMLVAQRTREIGLMRAIGSSRKQINRS 314 Query: 103 VLFLAILLSIFLFIS 117 VL A+LL I I Sbjct: 315 VLIEALLLGIVGSIL 329 >gi|71083417|ref|YP_266136.1| permease YjgP/YjgQ family protein [Candidatus Pelagibacter ubique HTCC1062] gi|91762160|ref|ZP_01264125.1| Predicted permease YjgP/YjgQ family protein [Candidatus Pelagibacter ubique HTCC1002] gi|71062530|gb|AAZ21533.1| Predicted permease YjgP/YjgQ family protein [Candidatus Pelagibacter ubique HTCC1062] gi|91717962|gb|EAS84612.1| Predicted permease YjgP/YjgQ family protein [Candidatus Pelagibacter ubique HTCC1002] Length = 357 Score = 38.8 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 50/117 (42%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK++ +++ S L + I + IL++I + S L +S P+V Sbjct: 1 MKTYIKFLINLFNISLLKIFITFFIIILITNILEQIEFFKNIDLSFFYLFFLSLLNTPSV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 L + PF F + T + EL + +G + I +IK + + +L I + I Sbjct: 61 LFEILPFIFLLGTQVFFIHLIDKNELQVFKYSGLNNIKIIKILGLYSFILGIIMVIF 117 >gi|315657058|ref|ZP_07909943.1| cell division protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315492450|gb|EFU82056.1| cell division protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 304 Score = 38.8 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 27/70 (38%) Query: 53 SGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSI 112 + + + M+ + TT L++M+R E I+ G S + + P + + + Sbjct: 179 TYLAVGLAVAMIIAAVLLITTTIRLSAMSRERETSIMRLVGASNLFVQLPFMVEGAVAAT 238 Query: 113 FLFISENIIE 122 + I Sbjct: 239 IGALGSVAIL 248 >gi|158321283|ref|YP_001513790.1| hypothetical protein Clos_2261 [Alkaliphilus oremlandii OhILAs] gi|158141482|gb|ABW19794.1| protein of unknown function DUF214 [Alkaliphilus oremlandii OhILAs] Length = 298 Score = 38.8 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 35/103 (33%), Gaps = 2/103 (1%) Query: 33 LQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNT 92 ++ + ++ ++ G +I ++L +V F + L R E+ I+ + Sbjct: 152 IKYYKELVDQLLNVAKFIRTVGLVIISILVLVAIFIISNTIKLALN--ARRQEIEIMKDV 209 Query: 93 GTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAK 135 G + + P L +LL + I L Sbjct: 210 GATNWFIRWPFLLEGMLLGLIGAALSIGIVYFGYQYAFNLITS 252 >gi|282866319|ref|ZP_06275365.1| protein of unknown function DUF214 [Streptomyces sp. ACTE] gi|282558905|gb|EFB64461.1| protein of unknown function DUF214 [Streptomyces sp. ACTE] Length = 860 Score = 38.8 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 31/79 (39%), Gaps = 3/79 (3%) Query: 41 SSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSM--NRNTELLIIDNTGTSRIT 98 + +S+ L + Y + + + N + + R E+ ++ G+SR Sbjct: 256 ADKDSMGSFLDVMKYAMLGFAGIAFLVGVFL-IVNTFSMLVAQRTREIGLMRAIGSSRKQ 314 Query: 99 LIKPVLFLAILLSIFLFIS 117 + + VL A+LL + Sbjct: 315 VNRSVLVEAVLLGVVGSAL 333 >gi|298346506|ref|YP_003719193.1| cell division protein [Mobiluncus curtisii ATCC 43063] gi|304389755|ref|ZP_07371714.1| cell division protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|298236567|gb|ADI67699.1| cell division protein [Mobiluncus curtisii ATCC 43063] gi|304326931|gb|EFL94170.1| cell division protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 304 Score = 38.8 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 27/70 (38%) Query: 53 SGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSI 112 + + + M+ + TT L++M+R E I+ G S + + P + + + Sbjct: 179 TYLAVGLAVAMIIAAVLLITTTIRLSAMSRERETSIMRLVGASNLFVQLPFMVEGAVAAT 238 Query: 113 FLFISENIIE 122 + I Sbjct: 239 IGALGSVAIL 248 >gi|315655088|ref|ZP_07907990.1| cell division protein [Mobiluncus curtisii ATCC 51333] gi|315490569|gb|EFU80192.1| cell division protein [Mobiluncus curtisii ATCC 51333] Length = 304 Score = 38.8 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 27/70 (38%) Query: 53 SGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSI 112 + + + M+ + TT L++M+R E I+ G S + + P + + + Sbjct: 179 TYLAVGLAVAMIIAAILLITTTIRLSAMSRERETSIMRLVGASNLFVQLPFMVEGAVAAT 238 Query: 113 FLFISENIIE 122 + I Sbjct: 239 IGALGSVAIL 248 >gi|315641244|ref|ZP_07896321.1| cell division protein FtsX [Enterococcus italicus DSM 15952] gi|315483011|gb|EFU73530.1| cell division protein FtsX [Enterococcus italicus DSM 15952] Length = 294 Score = 38.8 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 18/124 (14%), Positives = 43/124 (34%), Gaps = 2/124 (1%) Query: 30 IQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLII 89 +Q + + +S S+ ++ G + +L + F + T +T ++R E+ I+ Sbjct: 146 VQDARYGDDLSDKIFSIAKGVRTWGLVGSILLLFIAMF--LISNTIRITILSRQREIQIM 203 Query: 90 DNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENL 149 G + P + + + +I ++ L +S + N Sbjct: 204 RLVGAKNSYIRWPFFLEGGWIGLLGAVIPVLIIVFGYQKFYAVANPIMLRSNYSLVTPNE 263 Query: 150 FFRL 153 F Sbjct: 264 FMVP 267 >gi|116326947|ref|YP_796667.1| AraC family transcriptional regulator [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116119691|gb|ABJ77734.1| Transcriptional regulator, AraC family [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 540 Score = 38.8 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 37/120 (30%), Gaps = 4/120 (3%) Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 I L+ N+ + +L + + NYR ++ E HKRL I G+I Sbjct: 150 IDLQPNENRIFYLFVLSNEDINYRIRIMGLEEFELHKRLKFITSYSIVGIIGFAVLYSFF 209 Query: 298 LVRQRKKIHPIFISL----SISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + K IF L I F Y S +FL + Sbjct: 210 GYYRFKNSTFIFFPLYVFSVILTFYFLHGRTFAEVFGNTNNLFRHSYFLFLGTSYVFLFL 269 >gi|184156106|ref|YP_001844446.1| ABC transporter permease and ATP-binding components [Lactobacillus fermentum IFO 3956] gi|183227450|dbj|BAG27966.1| ABC transporter permease and ATP-binding components [Lactobacillus fermentum IFO 3956] Length = 661 Score = 38.8 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 40/103 (38%), Gaps = 1/103 (0%) Query: 37 NLVSSSTESLNILLKISGYLIPTVLPMVTPF-CFAMETTNVLTSMNRNTELLIIDNTGTS 95 N VSS + + + ++ V + + T ++ +R E+ I+ G S Sbjct: 514 NAVSSMISRIETYISLITNILAGVAGISLLVSALMIIVTMYMSVADRTKEIGILRALGES 573 Query: 96 RITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQL 138 + + + + ++++ IF I +I ++ +K Sbjct: 574 KKDIRRMFIAESLIIGIFSAIVATVIAFVAQAGFNAALSKIAT 616 >gi|302542969|ref|ZP_07295311.1| ABC lipoprotein transporter, permease component [Streptomyces hygroscopicus ATCC 53653] gi|302460587|gb|EFL23680.1| ABC lipoprotein transporter, permease component [Streptomyces himastatinicus ATCC 53653] Length = 856 Score = 38.8 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 29/74 (39%), Gaps = 3/74 (4%) Query: 46 LNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSM--NRNTELLIIDNTGTSRITLIKPV 103 + L + Y + + + N + + R E+ ++ G+SR + + V Sbjct: 257 IGSFLDVMKYAMLGFAGIAVLVGIFL-IVNTFSMLVAQRTREIGLMRAIGSSRKQINRSV 315 Query: 104 LFLAILLSIFLFIS 117 L A+LL I I Sbjct: 316 LLEALLLGIVGSIL 329 >gi|239941835|ref|ZP_04693772.1| putative ABC transporter permease protein [Streptomyces roseosporus NRRL 15998] gi|239988295|ref|ZP_04708959.1| putative ABC transporter permease protein [Streptomyces roseosporus NRRL 11379] gi|291445282|ref|ZP_06584672.1| ABC transport system integral membrane protein [Streptomyces roseosporus NRRL 15998] gi|291348229|gb|EFE75133.1| ABC transport system integral membrane protein [Streptomyces roseosporus NRRL 15998] Length = 861 Score = 38.8 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 29/74 (39%), Gaps = 3/74 (4%) Query: 46 LNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSM--NRNTELLIIDNTGTSRITLIKPV 103 + L + Y + + + N + + R E+ ++ G+SR + + V Sbjct: 261 MGAFLDVMKYAMLGFAGIAFLVGIFL-IVNTFSMLVAQRTREIGLMRAIGSSRKQVNRSV 319 Query: 104 LFLAILLSIFLFIS 117 L A+LL I + Sbjct: 320 LLEAVLLGIVGSLL 333 >gi|217322881|ref|YP_002327179.1| hypothetical protein ABBFA_003303 [Acinetobacter baumannii AB307-0294] gi|213986513|gb|ACJ56812.1| hypothetical protein ABBFA_003303 [Acinetobacter baumannii AB307-0294] Length = 71 Score = 38.4 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 30/69 (43%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + + L+ + I ++++ + + +IL I GY +P L Sbjct: 2 IIRRYLVKQVVSTSLVVIALLTLIMMGGRLIKYFGVAAQGRLDASILFSIIGYRLPEFLT 61 Query: 63 MVTPFCFAM 71 ++ P F + Sbjct: 62 LILPLGFLL 70 >gi|116332388|ref|YP_802106.1| AraC family transcriptional regulator [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116126077|gb|ABJ77348.1| Transcriptional regulator, AraC family [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 540 Score = 38.4 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 37/120 (30%), Gaps = 4/120 (3%) Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 I L+ N+ + +L + + NYR ++ E HKRL I G+I Sbjct: 150 IDLQPNENRIFYLFVLSNEDINYRIRIMGLEEFELHKRLKFITSYSIVGIIGFAVLYSFF 209 Query: 298 LVRQRKKIHPIFISL----SISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + K IF L I F Y S +FL + Sbjct: 210 GYYRFKNSTFIFFPLYVFSVILTFYFLHGRTFAEVFGNTNNLFRHSYFLFLGTSYVFLFL 269 >gi|126650468|ref|ZP_01722691.1| hypothetical protein BB14905_07758 [Bacillus sp. B14905] gi|126592624|gb|EAZ86623.1| hypothetical protein BB14905_07758 [Bacillus sp. B14905] Length = 439 Score = 38.4 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 40/112 (35%), Gaps = 16/112 (14%) Query: 50 LKISGYLIPTVLPMVTPFCFAMETTNVLTSMN-----RNTELLIIDNTGTSRITLIKPVL 104 + + ++ L V + + + +M R E+ ++ G S + + L Sbjct: 288 MNVFFLVLKIGLIFVGTIAVLIASIGIFNTMTMAVTERTREIGVLKAIGASPKLIQRLFL 347 Query: 105 -----------FLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYL 145 F+A+++S + + N + P A A +TFS + Sbjct: 348 MESTFIGLLGTFIAVIISYAISFAANAVLPLILKAATGEDAFATNDITFSLI 399 >gi|300790950|ref|YP_003771241.1| ABC transporter permease [Amycolatopsis mediterranei U32] gi|299800464|gb|ADJ50839.1| ABC transport system permease protein [Amycolatopsis mediterranei U32] Length = 815 Score = 38.4 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 26/60 (43%) Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 F + T L++ R EL ++ GT+ L + VL A+++ + ++ P Sbjct: 264 ALVMVFVVAGTLTLSTQQRQRELALLRAVGTTPRQLRRMVLGEALVVGLLAVGLAVVLGP 323 >gi|227515363|ref|ZP_03945412.1| ABC superfamily ATP binding cassette transporter permease and ABC protein [Lactobacillus fermentum ATCC 14931] gi|227086277|gb|EEI21589.1| ABC superfamily ATP binding cassette transporter permease and ABC protein [Lactobacillus fermentum ATCC 14931] Length = 661 Score = 38.4 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 40/103 (38%), Gaps = 1/103 (0%) Query: 37 NLVSSSTESLNILLKISGYLIPTVLPMVTPF-CFAMETTNVLTSMNRNTELLIIDNTGTS 95 N VSS + + + ++ V + + T ++ +R E+ I+ G S Sbjct: 514 NAVSSMISRIETYISLITNILSGVAGISLLVSALMIIVTMYMSVADRTKEIGILRALGES 573 Query: 96 RITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQL 138 + + + + ++++ IF I +I ++ +K Sbjct: 574 KKDIRRMFIAESLIIGIFSAIVATVIAFVAQAGFNAALSKIAT 616 >gi|299783598|gb|ADJ41596.1| ABC superfamily ATP binding cassette transporter permease and ABC protein [Lactobacillus fermentum CECT 5716] Length = 661 Score = 38.4 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 40/103 (38%), Gaps = 1/103 (0%) Query: 37 NLVSSSTESLNILLKISGYLIPTVLPMVTPF-CFAMETTNVLTSMNRNTELLIIDNTGTS 95 N VSS + + + ++ V + + T ++ +R E+ I+ G S Sbjct: 514 NAVSSMISRIETYISLITNILAGVAGISLLVSALMIIVTMYMSVADRTKEIGILRALGES 573 Query: 96 RITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQL 138 + + + + ++++ IF I +I ++ +K Sbjct: 574 KKDIRRMFIAESLIIGIFSAIVATVIAFVAQAGFNAALSKIAT 616 >gi|282866299|ref|ZP_06275345.1| protein of unknown function DUF214 [Streptomyces sp. ACTE] gi|282558885|gb|EFB64441.1| protein of unknown function DUF214 [Streptomyces sp. ACTE] Length = 842 Score = 38.4 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 11/64 (17%), Positives = 23/64 (35%), Gaps = 5/64 (7%) Query: 59 TVLPMVTPFCFAMETTNVLTSM-----NRNTELLIIDNTGTSRITLIKPVLFLAILLSIF 113 T+L + + + + R EL ++ G SR + VL A ++ + Sbjct: 263 TILLVFAGIALFVGVFLIANTFTMLVAQRTRELALMRAVGASRRQVKWAVLMEAAVVGLI 322 Query: 114 LFIS 117 + Sbjct: 323 ASVI 326 >gi|281491476|ref|YP_003353456.1| cell division permease FtsX [Lactococcus lactis subsp. lactis KF147] gi|281375194|gb|ADA64707.1| Cell division permease protein FtsX [Lactococcus lactis subsp. lactis KF147] Length = 311 Score = 38.4 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 15/102 (14%), Positives = 30/102 (29%) Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ F + T +T ++R E+ I+ G + P + + I + Sbjct: 192 ILLIFVAVFLISNTIRITILSRQREIQIMRLVGAKNGYIRWPFFLEGAWVGLLGSIIPGL 251 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS 162 I + + S N F L I Sbjct: 252 IVSWAYRLAFVSLTPSLQSQKLSMYATNQFIPAIVGLMAVIG 293 >gi|262283018|ref|ZP_06060785.1| cell division protein FtsX [Streptococcus sp. 2_1_36FAA] gi|262261270|gb|EEY79969.1| cell division protein FtsX [Streptococcus sp. 2_1_36FAA] Length = 323 Score = 38.4 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 42/114 (36%), Gaps = 2/114 (1%) Query: 40 SSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITL 99 + SL ++ G ++ +L + F + T +T ++R+ E+ I+ G + Sbjct: 185 TKRIFSLADFIQTWGLILAGMLIFIA--IFLISNTIRITIISRSREIQIMRLVGAKNSYI 242 Query: 100 IKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRL 153 P L + + + + + + K +A S + LF + Sbjct: 243 RGPFLLEGAWIGLLGAVMPAALVYFAYNIAYRSVNKGLVAQNLSMIAPKLFIPI 296 >gi|302874158|ref|YP_003842791.1| hypothetical protein Clocel_1272 [Clostridium cellulovorans 743B] gi|307689583|ref|ZP_07632029.1| hypothetical protein Ccel74_15609 [Clostridium cellulovorans 743B] gi|302577015|gb|ADL51027.1| protein of unknown function DUF214 [Clostridium cellulovorans 743B] Length = 295 Score = 38.4 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 35/92 (38%), Gaps = 1/92 (1%) Query: 46 LNILLKISGYLIPTVLPMVTPFCFA-METTNVLTSMNRNTELLIIDNTGTSRITLIKPVL 104 K++ +++ + ++ + T LT +R E+ I+ N G + + P L Sbjct: 162 FESFKKVTMWILLGLSVVLFAVSLFLIANTIKLTVFSRRREIAIMKNIGATDWFIRWPFL 221 Query: 105 FLAILLSIFLFISENIIEPKCRSTIKQLSAKA 136 ++L I II S + + A Sbjct: 222 IEGMILGFLGDIISVIILFAGYSVLYNKVSSA 253 >gi|169829801|ref|YP_001699959.1| macrolide export ATP-binding/permease [Lysinibacillus sphaericus C3-41] gi|168994289|gb|ACA41829.1| Macrolide export ATP-binding/permease protein [Lysinibacillus sphaericus C3-41] Length = 439 Score = 38.4 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 40/112 (35%), Gaps = 16/112 (14%) Query: 50 LKISGYLIPTVLPMVTPFCFAMETTNVLTSMN-----RNTELLIIDNTGTSRITLIKPVL 104 + + ++ L V + + + +M R E+ ++ G S + + L Sbjct: 288 MNVFFLVLKIGLIFVGTIAVLIASIGIFNTMTMAVTERTREIGVLKAIGASPKLIQRLFL 347 Query: 105 -----------FLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYL 145 F+A+++S + + N + P A A +TFS + Sbjct: 348 MESTFIGLLGTFIAVIISYAISFAANAVLPLILKAATGEDAFATNDITFSLI 399 >gi|322706047|gb|EFY97629.1| P-type calcium ATPase, putative [Metarhizium anisopliae ARSEF 23] Length = 1259 Score = 38.4 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 25/80 (31%), Gaps = 5/80 (6%) Query: 13 GRSFLMSCLFIVFIAWVIQILQRINLVSSSTES--LNILLKISGYLIPTVLPMV---TPF 67 F I F+ I+ L R+ ++S S I I V+ V Sbjct: 364 LIVFGAVVGAIFFVILFIRYLVRLKWMASKGPSNKAEEFFHILILSITVVIITVPEGLAL 423 Query: 68 CFAMETTNVLTSMNRNTELL 87 + T M R+ L+ Sbjct: 424 NVTVALAFATTRMLRDNNLV 443 >gi|260662636|ref|ZP_05863530.1| ABC transporter permease and ATP-binding component [Lactobacillus fermentum 28-3-CHN] gi|260552717|gb|EEX25716.1| ABC transporter permease and ATP-binding component [Lactobacillus fermentum 28-3-CHN] Length = 661 Score = 38.0 bits (87), Expect = 2.0, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 40/103 (38%), Gaps = 1/103 (0%) Query: 37 NLVSSSTESLNILLKISGYLIPTVLPMVTPF-CFAMETTNVLTSMNRNTELLIIDNTGTS 95 N VSS + + + ++ V + + T ++ +R E+ I+ G S Sbjct: 514 NAVSSMISRIKTYISLITNILAGVAGISLLVSALMIIVTMYMSVADRTKEIGILRALGES 573 Query: 96 RITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQL 138 + + + + ++++ IF I +I ++ +K Sbjct: 574 KKDIRRMFIAESLIIGIFSAIVATVIAFVAQAGFNAALSKIAT 616 >gi|262089343|gb|ACY24563.1| copper-containing nitrite reductase [uncultured crenarchaeote 76h13] Length = 452 Score = 38.0 bits (87), Expect = 2.1, Method: Composition-based stats. Identities = 16/122 (13%), Positives = 46/122 (37%), Gaps = 19/122 (15%) Query: 148 NLFFRLDDDLY----IKISKYNPNNTLQGIF--IVDSRDTQ--THKIYYAQS---GSIDL 196 ++ + + +Y + + P +F + ++ D A S G Sbjct: 154 GVWEHISNGMYGGIIVHPANEEPAKEFYMVFSELYNNADKGPFVGTNGTAGSFDIGKFIS 213 Query: 197 DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPN 256 + ++L +G H+ P +++ ++ + ++ +K + +++NP PN Sbjct: 214 NNPDLVLTNGMAHKYVPAVGEVNKLE--------LNKDAELFKVKPGEMTRWYIINPGPN 265 Query: 257 NP 258 + Sbjct: 266 DG 267 >gi|269213541|ref|ZP_06158032.1| permease, YjgP/YjgQ family [Neisseria cinerea ATCC 14685] gi|269146393|gb|EEZ72811.1| permease, YjgP/YjgQ family [Neisseria cinerea ATCC 14685] Length = 182 Score = 38.0 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 20/176 (11%), Positives = 61/176 (34%), Gaps = 13/176 (7%) Query: 189 AQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLS 248 A+S ++ D L + ++S +++ + + +++K + ++ Sbjct: 14 AESAVLNNDGS-WQLKNIRRSTLGEDKVEVSTAAEETWPIAVKRNLMDVLLVKPDQMSVG 72 Query: 249 FL---LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKI 305 L ++ NN + + Y + ++L + + L++ R Sbjct: 73 ELTTYISHLENN----NQNTQIYAIAWWRKLVYPIAAWVMALVAFAF--TPQTTRHGNMG 126 Query: 306 HPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 +F + + + F + P+ L F + +++L+ ++K Sbjct: 127 LKLFGGICLGLLFHFAGRLFGFTSQLYGVPPFLAGALPTIAFALLAVWLIRRQEKR 182 >gi|157150897|ref|YP_001450719.1| cell division protein FtsX [Streptococcus gordonii str. Challis substr. CH1] gi|157075691|gb|ABV10374.1| cell division protein FtsX [Streptococcus gordonii str. Challis substr. CH1] Length = 308 Score = 38.0 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 42/114 (36%), Gaps = 2/114 (1%) Query: 40 SSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITL 99 + SL ++ G ++ +L + F + T +T ++R+ E+ I+ G + Sbjct: 170 TKRIFSLADFIQTWGLILAGMLIFIA--IFLISNTIRITIISRSREIQIMRLVGAKNSYI 227 Query: 100 IKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRL 153 P L + + + + + + K +A S + LF + Sbjct: 228 RGPFLLEGAWIGLLGAVMPAALVYFAYNIAYRSVNKGLVAQNLSMIAPKLFIPI 281 >gi|317130273|ref|YP_004096555.1| hypothetical protein Bcell_3583 [Bacillus cellulosilyticus DSM 2522] gi|315475221|gb|ADU31824.1| protein of unknown function DUF214 [Bacillus cellulosilyticus DSM 2522] Length = 297 Score = 38.0 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 38/104 (36%), Gaps = 2/104 (1%) Query: 45 SLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVL 104 S +++ G+ I ++ ++ F + T LT + R E+ I+ G + + P Sbjct: 164 SATDFVRMVGFAI--IIALMFTAMFLIANTIKLTIIARKREIQIMKLVGATNGFIRWPFF 221 Query: 105 FLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEEN 148 +LL + I S + FS+L N Sbjct: 222 VEGLLLGTLGAVIPIAILSYGYSNFYSSMGQQTGLDFFSFLAPN 265 >gi|313677511|ref|YP_004055507.1| hypothetical protein Ftrac_3425 [Marivirga tractuosa DSM 4126] gi|312944209|gb|ADR23399.1| protein of unknown function DUF214 [Marivirga tractuosa DSM 4126] Length = 799 Score = 38.0 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 34/96 (35%), Gaps = 5/96 (5%) Query: 52 ISGYLIPTVLPMVTPFCFAMETTNVLTS-MNRNTELLIIDNTGTSRITLIKPVLFLAILL 110 I Y++ + +V MNR E+ + G + ++ L AI++ Sbjct: 285 IFIYVLLGLALVVMLSACFNYANLTTARAMNRAKEIGVRKVIGAGKKHIMAQFLMEAIII 344 Query: 111 SIFLF----ISENIIEPKCRSTIKQLSAKAQLALTF 142 S+F F + + P S L A + T Sbjct: 345 SLFAFAIAALLVEYLHPSLNSMFTSLGAPIRFDKTN 380 >gi|224543371|ref|ZP_03683910.1| hypothetical protein CATMIT_02571 [Catenibacterium mitsuokai DSM 15897] gi|224523698|gb|EEF92803.1| hypothetical protein CATMIT_02571 [Catenibacterium mitsuokai DSM 15897] Length = 302 Score = 38.0 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 32/89 (35%) Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 V+ ++ F + T +T +R+TE+ I+ G S + P + I + + I Sbjct: 181 FVVALIVVALFMIANTIKITITSRSTEISIMRMVGASNWYIRIPFMLEGIFIGLIGSIVP 240 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEE 147 II + +++ Sbjct: 241 LIILAYGYKFAYVTMTSLMSSNLITFVPP 269 >gi|254384880|ref|ZP_05000216.1| ABC transporter integral membrane protein [Streptomyces sp. Mg1] gi|194343761|gb|EDX24727.1| ABC transporter integral membrane protein [Streptomyces sp. Mg1] Length = 850 Score = 38.0 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 26/67 (38%), Gaps = 5/67 (7%) Query: 59 TVLPMVTPFCFAMETTNVLTSM-----NRNTELLIIDNTGTSRITLIKPVLFLAILLSIF 113 T+L + + + + R EL ++ G +R +++ VL A+++ Sbjct: 269 TMLLVFAGISLFVGIFLIYNTFTMLVTQRTKELALLRAVGANRGQVMRSVLAEALVVGAV 328 Query: 114 LFISENI 120 + I Sbjct: 329 SAVIGLI 335 >gi|291301941|ref|YP_003513219.1| hypothetical protein Snas_4481 [Stackebrandtia nassauensis DSM 44728] gi|290571161|gb|ADD44126.1| protein of unknown function DUF214 [Stackebrandtia nassauensis DSM 44728] Length = 854 Score = 37.6 bits (86), Expect = 2.8, Method: Composition-based stats. Identities = 13/77 (16%), Positives = 27/77 (35%), Gaps = 1/77 (1%) Query: 46 LNILLKISGYLIPTVLPMVTPFCFAMET-TNVLTSMNRNTELLIIDNTGTSRITLIKPVL 104 L+I+L YL+ + + T + R EL + G R + + V+ Sbjct: 260 LSIILDFFNYLLLGFGTIALLVSVFLIINTFSIIVAQRTRELALFRAIGAGRGQVTRSVM 319 Query: 105 FLAILLSIFLFISENII 121 A ++ + + Sbjct: 320 LEAFIIGALAAVVGMAV 336 >gi|169839875|ref|ZP_02873063.1| hypothetical protein cdivTM_22572 [candidate division TM7 single-cell isolate TM7a] Length = 122 Score = 37.6 bits (86), Expect = 2.8, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 31/83 (37%), Gaps = 2/83 (2%) Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFI 175 E + P+ I + + + S EE +F ++ I + N T + I Sbjct: 6 LEIYVNPRALENINAQTKQVLASKPSSLTEEKVFLTNEEKDLFYIDEVNNEAATAKNFLI 65 Query: 176 VDSR-DTQTHKIYYAQSGSIDLD 197 ++ R D ++ A++ D Sbjct: 66 INKRGDNHYPIVFLAENARFDPG 88 >gi|167761000|ref|ZP_02433127.1| hypothetical protein CLOSCI_03398 [Clostridium scindens ATCC 35704] gi|167661379|gb|EDS05509.1| hypothetical protein CLOSCI_03398 [Clostridium scindens ATCC 35704] Length = 479 Score = 37.6 bits (86), Expect = 2.8, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 1/77 (1%) Query: 60 VLPMVTPFCFAMETTNVLTSM-NRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 +L +V+ F + L M NR E+ I+ G S+ + L A+L+ F+ Sbjct: 328 LLLLVSSASFIILVLIFLFWMKNRTQEIGILMALGESKKRIWMQFLVEALLVGCIGFVLS 387 Query: 119 NIIEPKCRSTIKQLSAK 135 P A+ Sbjct: 388 MGASPFLSKATASYLAR 404 >gi|262369027|ref|ZP_06062356.1| lipoprotein release ABC transporter permease [Acinetobacter johnsonii SH046] gi|262316705|gb|EEY97743.1| lipoprotein release ABC transporter permease [Acinetobacter johnsonii SH046] Length = 407 Score = 37.6 bits (86), Expect = 2.9, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 41/94 (43%), Gaps = 10/94 (10%) Query: 28 WVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELL 87 W+ Q +N +++ + S N+++ G F + + ++ + R E+ Sbjct: 265 WIETNAQLMNAITAQSLSTNMIIVFVG----------ISVAFGIASVMSVSVVQRTREIG 314 Query: 88 IIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 I+ TG ++ +++ LF + + + +++ Sbjct: 315 ILRATGATQAQILRVFLFQGAIFGLLGSMLGSVV 348 >gi|270292343|ref|ZP_06198554.1| cell division ABC transporter, permease protein FtsX [Streptococcus sp. M143] gi|270278322|gb|EFA24168.1| cell division ABC transporter, permease protein FtsX [Streptococcus sp. M143] Length = 329 Score = 37.6 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 47/117 (40%), Gaps = 2/117 (1%) Query: 46 LNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLF 105 L +++ G +I +L + F + T +T ++R+ E+ I+ G + P L Sbjct: 197 LASFIRVWGLVIAGLLIFIAVF--LISNTIRITIISRSREIQIMRLVGAKNGYIRGPFLL 254 Query: 106 LAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS 162 + +F +++ + + Q K+ + S + ++F L L I Sbjct: 255 EGAFIGLFGAAIPSVLVFFVYNMVYQSVNKSLVGQNLSMITPDVFIPLMTVLLFVIG 311 >gi|148272490|ref|YP_001222051.1| putative ABC transporter permease,involved in cell division [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147830420|emb|CAN01355.1| putative ABC transporter, permease component,involved in cell division [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 305 Score = 37.6 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 34/90 (37%), Gaps = 4/90 (4%) Query: 33 LQRINLVSSSTESLNILLKISGYLIPTVL----PMVTPFCFAMETTNVLTSMNRNTELLI 88 L + V+ + L+ + I T + M+ + TT L++ +R EL I Sbjct: 156 LAGVENVTDQRQYLDQIFSILNAASLTAVGIAGLMLVAAALLIATTIRLSAFSRRRELGI 215 Query: 89 IDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + G S + P + + ++ + Sbjct: 216 MRLVGASNRFIQTPFILEGVFAALIGSVLA 245 >gi|318059751|ref|ZP_07978474.1| ABC transporter integral membrane protein [Streptomyces sp. SA3_actG] Length = 839 Score = 37.6 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 26/68 (38%), Gaps = 5/68 (7%) Query: 59 TVLPMVTPFCFAMETTNVLTSM-----NRNTELLIIDNTGTSRITLIKPVLFLAILLSIF 113 VL + + + + R EL ++ G SR + + VL A L+ + Sbjct: 267 QVLLVFAGIALFVGIFIIANTFTMLVAQRTRELALLRAVGASRRQVTRSVLTEAFLIGLV 326 Query: 114 LFISENII 121 ++ ++ Sbjct: 327 AAVAGGVL 334 >gi|302523385|ref|ZP_07275727.1| ABC transporter integral membrane protein [Streptomyces sp. SPB78] gi|302432280|gb|EFL04096.1| ABC transporter integral membrane protein [Streptomyces sp. SPB78] Length = 839 Score = 37.6 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 26/68 (38%), Gaps = 5/68 (7%) Query: 59 TVLPMVTPFCFAMETTNVLTSM-----NRNTELLIIDNTGTSRITLIKPVLFLAILLSIF 113 VL + + + + R EL ++ G SR + + VL A L+ + Sbjct: 267 QVLLVFAGIALFVGIFIIANTFTMLVAQRTRELALLRAVGASRRQVTRSVLTEAFLIGLV 326 Query: 114 LFISENII 121 ++ ++ Sbjct: 327 AAVAGGVL 334 >gi|260589186|ref|ZP_05855099.1| putative efflux ABC transporter, permease protein [Blautia hansenii DSM 20583] gi|260540267|gb|EEX20836.1| putative efflux ABC transporter, permease protein [Blautia hansenii DSM 20583] Length = 806 Score = 37.6 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 39/98 (39%), Gaps = 3/98 (3%) Query: 33 LQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNT 92 L S +S+ ++KI GY ++ M+T M T +L + R EL ++ Sbjct: 657 LSSFEGEVESLDSMMAIMKIMGYSFLLLIGMITFMN--MANTMILNVITRKRELGVLQAV 714 Query: 93 GTSRITLIKPVLFLAILLSIFLFISENII-EPKCRSTI 129 G + L K + +L ++ + ++ P Sbjct: 715 GMTNQQLNKMLRNEGLLFTLGSIVISLVVGIPAGYGLF 752 >gi|227874897|ref|ZP_03993050.1| cell division protein FtsX [Mobiluncus mulieris ATCC 35243] gi|269976499|ref|ZP_06183484.1| cell division protein FtsX [Mobiluncus mulieris 28-1] gi|306818193|ref|ZP_07451924.1| cell division protein FtsX [Mobiluncus mulieris ATCC 35239] gi|307701721|ref|ZP_07638735.1| efflux ABC transporter, permease protein [Mobiluncus mulieris FB024-16] gi|227844672|gb|EEJ54828.1| cell division protein FtsX [Mobiluncus mulieris ATCC 35243] gi|269935300|gb|EEZ91849.1| cell division protein FtsX [Mobiluncus mulieris 28-1] gi|304649157|gb|EFM46451.1| cell division protein FtsX [Mobiluncus mulieris ATCC 35239] gi|307612979|gb|EFN92234.1| efflux ABC transporter, permease protein [Mobiluncus mulieris FB024-16] Length = 304 Score = 37.6 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 28/70 (40%) Query: 53 SGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSI 112 + I + M+ + TT L++M+R E I+ G S + + P + + + Sbjct: 179 TMLSIGLAVAMIVAAVLLITTTIRLSAMSRERETSIMRLVGASNLFVQLPFMVEGAIAAT 238 Query: 113 FLFISENIIE 122 ++ + Sbjct: 239 IGALAAVGVL 248 >gi|333022727|ref|ZP_08450791.1| putative ABC transporter integral membrane protein [Streptomyces sp. Tu6071] gi|332742579|gb|EGJ73020.1| putative ABC transporter integral membrane protein [Streptomyces sp. Tu6071] Length = 839 Score = 37.6 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 26/68 (38%), Gaps = 5/68 (7%) Query: 59 TVLPMVTPFCFAMETTNVLTSM-----NRNTELLIIDNTGTSRITLIKPVLFLAILLSIF 113 VL + + + + R EL ++ G SR + + VL A L+ + Sbjct: 267 QVLLVFAGIALFVGIFIIANTFTMLVAQRTRELALLRAVGASRRQVTRSVLTEAFLIGLV 326 Query: 114 LFISENII 121 ++ ++ Sbjct: 327 AAVAGGVL 334 >gi|213403750|ref|XP_002172647.1| calcium-transporting ATPase [Schizosaccharomyces japonicus yFS275] gi|212000694|gb|EEB06354.1| calcium-transporting ATPase [Schizosaccharomyces japonicus yFS275] Length = 1304 Score = 37.2 bits (85), Expect = 3.5, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 27/70 (38%) Query: 18 MSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVL 77 M F + I +++++ + S + +L +S L+ +P P + Sbjct: 481 MLLFFALIIEFLVRLRNNHDSSKSKGQEFMQILIVSITLLVVAVPEGLPLAVTLALAFAT 540 Query: 78 TSMNRNTELL 87 M ++ L+ Sbjct: 541 NRMQKDNNLV 550 >gi|83772473|dbj|BAE62602.1| unnamed protein product [Aspergillus oryzae] Length = 819 Score = 37.2 bits (85), Expect = 3.5, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 31/92 (33%), Gaps = 1/92 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + YI G + I+FI ++ + + + L IS ++ Sbjct: 335 LNVLAKYI-ANFGGLAALVLFIILFIKFLTSLPHSSLTPTEKGQQFLDLFIISLTVVVIA 393 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNT 92 +P P + T M ++ L+ + + Sbjct: 394 VPEGLPLTVTLALAFATTRMLKDHNLVRMLSA 425 >gi|328882940|emb|CCA56179.1| putative ABC transporter integral membrane protein [Streptomyces venezuelae ATCC 10712] Length = 843 Score = 37.2 bits (85), Expect = 3.6, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 29/90 (32%), Gaps = 9/90 (10%) Query: 56 LIPTVLPMVTPFCFAMETTNVLTSM-----NRNTELLIIDNTGTSRITLIKPVL----FL 106 + VL + + + R EL ++ G SR + + VL + Sbjct: 261 ALNQVLLGFAGIALFVGIFLISNTFTMLVAQRTKELALMRAVGASRKQITRSVLAEAGLV 320 Query: 107 AILLSIFLFISENIIEPKCRSTIKQLSAKA 136 +L S ++ + RS + K Sbjct: 321 GLLASAVGYVLGIGLAVALRSGMNAFDLKI 350 >gi|207109665|ref|ZP_03243827.1| hypothetical protein HpylH_10769 [Helicobacter pylori HPKX_438_CA4C1] Length = 109 Score = 37.2 bits (85), Expect = 3.6, Method: Composition-based stats. Identities = 15/98 (15%), Positives = 37/98 (37%), Gaps = 3/98 (3%) Query: 16 FLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTN 75 FL+ L + I L+ + + S N+++ Y I L P + Sbjct: 15 FLIVLLALELFFVGIDSLKYADKMPD---SANMIILFFTYDILFALNYTLPISLLLAMVL 71 Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIF 113 S ++ + + + G S+ ++ P+ +++ + Sbjct: 72 FYISFIKSNQYTALLSIGFSKCQILSPIFLISLFFTAV 109 >gi|299538228|ref|ZP_07051513.1| macrolide export ATP-binding/permease protein [Lysinibacillus fusiformis ZC1] gi|298726430|gb|EFI67020.1| macrolide export ATP-binding/permease protein [Lysinibacillus fusiformis ZC1] Length = 439 Score = 37.2 bits (85), Expect = 3.7, Method: Composition-based stats. Identities = 17/112 (15%), Positives = 38/112 (33%), Gaps = 16/112 (14%) Query: 50 LKISGYLIPTVLPMVTPFCFAMETTNVLTSMN-----RNTELLIIDNTGTSRITLIKPVL 104 + + ++ L V + + + +M R E+ ++ G S + + L Sbjct: 288 MNVFFLVLKIGLIFVGTIAVLIASIGIFNTMTMAVTERTREIGVLKAIGASPKLIQRLFL 347 Query: 105 -----------FLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYL 145 +A+++S + + N P A A +TFS + Sbjct: 348 MESTFIGIFGTLIAVVISYAISFAANAALPLILKAATGEEAFATNDITFSLI 399 >gi|297583385|ref|YP_003699165.1| hypothetical protein Bsel_1081 [Bacillus selenitireducens MLS10] gi|297141842|gb|ADH98599.1| protein of unknown function DUF214 [Bacillus selenitireducens MLS10] Length = 297 Score = 37.2 bits (85), Expect = 3.7, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 34/86 (39%), Gaps = 2/86 (2%) Query: 45 SLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVL 104 S +++ G ++ +L ++ F + T +T + R E+ I+ G + + P Sbjct: 164 SATDFVRLVGIVL--ILGLIFTAVFLIANTIKITIIARKREIQIMKLVGATNAFIRWPFF 221 Query: 105 FLAILLSIFLFISENIIEPKCRSTIK 130 +LL IF + I+ Sbjct: 222 VEGLLLGIFGSLLPIIVLSYGYDQFY 247 >gi|42557785|emb|CAF28758.1| putative copper-containing nitrite reductase [uncultured crenarchaeote] Length = 537 Score = 37.2 bits (85), Expect = 3.7, Method: Composition-based stats. Identities = 18/122 (14%), Positives = 46/122 (37%), Gaps = 19/122 (15%) Query: 148 NLFFRLDDDLY----IKISKYNPNNTLQGIF--IVDSRDTQ--THKIYYAQS---GSIDL 196 ++ + + +Y + + P +F I +S D A S G Sbjct: 152 GVWEHISNGMYGGIVVHPTNEEPAKEFYMVFSEIYNSADKGPFVGTNGTAGSFDIGKFIS 211 Query: 197 DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPN 256 + ++L +G H+ P +++ ++ + ++ +K + +++NP PN Sbjct: 212 NNPDLVLTNGMSHKYVPAVGEVNKLE--------LNKDAEIFKVKPGELTRWYIVNPGPN 263 Query: 257 NP 258 + Sbjct: 264 DG 265 >gi|306825596|ref|ZP_07458935.1| cell division protein FtsX [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304431957|gb|EFM34934.1| cell division protein FtsX [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 311 Score = 37.2 bits (85), Expect = 3.7, Method: Composition-based stats. Identities = 20/117 (17%), Positives = 46/117 (39%), Gaps = 2/117 (1%) Query: 46 LNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLF 105 L +++ G +I +L + F + T +T ++R+ E+ I+ G + P L Sbjct: 179 LASFIRVWGLVIAGLLIFIAVF--LISNTIRITIISRSREIQIMRLVGARNGYIRGPFLL 236 Query: 106 LAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS 162 + + +++ + + Q K+ + S + ++F L L I Sbjct: 237 EGAFIGLLGAAIPSVLVFFVYNIVYQSVNKSLVGQNLSMITPDVFVPLMTVLLFVIG 293 >gi|21221549|ref|NP_627328.1| ABC transporter integral membrane protein [Streptomyces coelicolor A3(2)] gi|10241793|emb|CAC09551.1| putative ABC transport system integral membrane protein [Streptomyces coelicolor A3(2)] Length = 854 Score = 37.2 bits (85), Expect = 3.7, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 30/79 (37%), Gaps = 3/79 (3%) Query: 41 SSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSM--NRNTELLIIDNTGTSRIT 98 E + + + Y + + + N + + R E+ ++ G+SR Sbjct: 253 EGREDVGEFMDVIKYAMLGFAGIAFLVGIFL-IINTFSMLVAQRTREIGLMRAIGSSRRQ 311 Query: 99 LIKPVLFLAILLSIFLFIS 117 + + VL A+LL + + Sbjct: 312 VNRSVLVEALLLGVVGSVL 330 >gi|256787261|ref|ZP_05525692.1| ABC transport system integral membrane protein [Streptomyces lividans TK24] gi|289771156|ref|ZP_06530534.1| ABC transport system integral membrane protein [Streptomyces lividans TK24] gi|289701355|gb|EFD68784.1| ABC transport system integral membrane protein [Streptomyces lividans TK24] Length = 854 Score = 37.2 bits (85), Expect = 3.8, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 30/79 (37%), Gaps = 3/79 (3%) Query: 41 SSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSM--NRNTELLIIDNTGTSRIT 98 E + + + Y + + + N + + R E+ ++ G+SR Sbjct: 253 EGREDVGEFMDVIKYAMLGFAGIAFLVGIFL-IINTFSMLVAQRTREIGLMRAIGSSRRQ 311 Query: 99 LIKPVLFLAILLSIFLFIS 117 + + VL A+LL + + Sbjct: 312 VNRSVLVEALLLGVVGSVL 330 >gi|170782439|ref|YP_001710772.1| putative cell division protein [Clavibacter michiganensis subsp. sepedonicus] gi|169157008|emb|CAQ02180.1| putative cell division protein [Clavibacter michiganensis subsp. sepedonicus] Length = 305 Score = 37.2 bits (85), Expect = 3.8, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 34/90 (37%), Gaps = 4/90 (4%) Query: 33 LQRINLVSSSTESLNILLKISGYLIPTVL----PMVTPFCFAMETTNVLTSMNRNTELLI 88 L + V+ + L+ + I T + M+ + TT L++ +R EL I Sbjct: 156 LAGVESVTDQRQYLDQIFSILNAASLTAVGIAGLMLVAAALLIATTIRLSAFSRRRELGI 215 Query: 89 IDNTGTSRITLIKPVLFLAILLSIFLFISE 118 + G S + P + + ++ + Sbjct: 216 MRLVGASNRFIQTPFILEGVFAALIGSVLA 245 >gi|296134228|ref|YP_003641475.1| protein of unknown function DUF214 [Thermincola sp. JR] gi|296032806|gb|ADG83574.1| protein of unknown function DUF214 [Thermincola potens JR] Length = 295 Score = 37.2 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 28/76 (36%) Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ + F + TT LT R E+ I+ G + + P L ++L + Sbjct: 177 IVLLALAAIFLIATTIRLTVFARRKEIQIMKMIGATNWFIRWPFLLEGMILGFVGALLAV 236 Query: 120 IIEPKCRSTIKQLSAK 135 I+ T+ + Sbjct: 237 IVVCFAYLTLADYLQR 252 >gi|297193945|ref|ZP_06911343.1| ABC transport system integral membrane protein [Streptomyces pristinaespiralis ATCC 25486] gi|197723502|gb|EDY67410.1| ABC transport system integral membrane protein [Streptomyces pristinaespiralis ATCC 25486] Length = 856 Score = 37.2 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 31/78 (39%), Gaps = 3/78 (3%) Query: 41 SSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSM--NRNTELLIIDNTGTSRIT 98 S E + L + Y + + + N + + R E+ ++ G+SR Sbjct: 253 SGREEVGSFLDVMKYAMLGFAGIAFLVGIFL-IVNTFSMLVAQRTREIGLMRAIGSSRKQ 311 Query: 99 LIKPVLFLAILLSIFLFI 116 + + VL A+LL + I Sbjct: 312 VNRSVLVEALLLGLVGSI 329 >gi|322374636|ref|ZP_08049150.1| cell division ABC transporter, permease protein FtsX [Streptococcus sp. C300] gi|321280136|gb|EFX57175.1| cell division ABC transporter, permease protein FtsX [Streptococcus sp. C300] Length = 329 Score = 37.2 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 20/117 (17%), Positives = 46/117 (39%), Gaps = 2/117 (1%) Query: 46 LNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLF 105 L +++ G +I +L + F + T +T ++R+ E+ I+ G + P L Sbjct: 197 LASFIRVWGLVIAGLLIFIAVF--LISNTIRITIISRSREIQIMRLVGAKNGYIRGPFLL 254 Query: 106 LAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS 162 + + +++ + + Q K+ + S + ++F L L I Sbjct: 255 EGAFIGLLGAAIPSVLVFFVYNMVYQSVNKSLVGQNLSMITPDVFIPLMTVLLFLIG 311 >gi|297250818|ref|ZP_06934295.1| permease, YjgP/YjgQ family [Neisseria polysaccharea ATCC 43768] gi|296837906|gb|EFH21844.1| permease, YjgP/YjgQ family [Neisseria polysaccharea ATCC 43768] Length = 188 Score = 37.2 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 22/190 (11%), Positives = 64/190 (33%), Gaps = 15/190 (7%) Query: 178 SRDTQTHKIYYAQ-SGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 R+ + A+ ++ + L + ++S +S+ + + Sbjct: 7 QRNDKNELTQAAEAESAVLNTDGSWQLKNIRRSILGEDKVEVSTAAEESWPISVKRNLMD 66 Query: 237 TIVLKANDQNLSFL---LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 +++K + ++ L + NN + + Y + ++L + + L++ Sbjct: 67 VLLVKPDQMSVGELTTYIRHLQNNS----QNTQIYAIAWWRKLVYPVAAWVMALVAFAF- 121 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISSIF 350 R +F + + + F + P+ IL LF + ++ Sbjct: 122 -TPQTTRHGNMGLKLFGGICLGLLFHFAGRLFGFAGQLYGVPPFLAGILPTALFALLAV- 179 Query: 351 LLMIKKKYTK 360 +I+K+ + Sbjct: 180 -RLIRKQEKR 188 >gi|237718006|ref|ZP_04548487.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|229452647|gb|EEO58438.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] Length = 380 Score = 37.2 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 46/85 (54%), Gaps = 6/85 (7%) Query: 265 LETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSY 324 + +++E+HK++T L ++F I A ++R+ P+ +S+ + F +++ Sbjct: 114 IRKHKTEWHKKITISLSCLLFFFIG---APLGGIIRKGGLGMPVIVSV-LVFIIYYIIDN 169 Query: 325 IIHKIEQNPYYIPILYLFLFCISSI 349 +K+ ++ +I +++ ++ S++ Sbjct: 170 TGYKMARDGKWI--VWMGMWTSSAV 192 >gi|302555138|ref|ZP_07307480.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM 40736] gi|302472756|gb|EFL35849.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM 40736] Length = 180 Score = 37.2 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 28/79 (35%), Gaps = 2/79 (2%) Query: 274 KRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP 333 RL L FGL ++V R ++ H S+ GV + ++ Q+ Sbjct: 61 DRLGGALICFSFGLPAVVGGAWPLFARGGRR-HAKAASVVRGHGVGMAGAAVLTLWAQSA 119 Query: 334 YYIPILYLFLFCISSIFLL 352 P L+ + LL Sbjct: 120 NDWP-LWSIPAIWGPLALL 137 >gi|315612840|ref|ZP_07887751.1| cell division protein FtsX [Streptococcus sanguinis ATCC 49296] gi|315314950|gb|EFU62991.1| cell division protein FtsX [Streptococcus sanguinis ATCC 49296] Length = 311 Score = 37.2 bits (85), Expect = 4.3, Method: Composition-based stats. Identities = 20/117 (17%), Positives = 46/117 (39%), Gaps = 2/117 (1%) Query: 46 LNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLF 105 L +++ G +I +L + F + T +T ++R+ E+ I+ G + P L Sbjct: 179 LASFIRVWGLVIAGLLIFIAVF--LISNTIRITIISRSREIQIMRLVGAKNGYIRGPFLL 236 Query: 106 LAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS 162 + + +++ + + Q K+ + S + ++F L L I Sbjct: 237 EGAFIGLLGAAIPSVLVFFVYNMVYQSVNKSLVGQNLSMITPDVFIPLMTVLLFVIG 293 >gi|297200239|ref|ZP_06917636.1| ABC transporter integral membrane protein [Streptomyces sviceus ATCC 29083] gi|197717007|gb|EDY61041.1| ABC transporter integral membrane protein [Streptomyces sviceus ATCC 29083] Length = 856 Score = 37.2 bits (85), Expect = 4.3, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 29/71 (40%), Gaps = 3/71 (4%) Query: 49 LLKISGYLIPTVLPMVTPFCFAMETTNVLTSM--NRNTELLIIDNTGTSRITLIKPVLFL 106 + + Y + + + N + + R E+ ++ G+SR + + VL Sbjct: 260 FMNVMKYAMLGFAGIAFLVGIFL-IINTFSMLVAQRTREIGLMRAVGSSRGQVNRSVLVE 318 Query: 107 AILLSIFLFIS 117 A+LL +F + Sbjct: 319 ALLLGVFGSVL 329 >gi|19114802|ref|NP_593890.1| vacuolar calcium transporting P-type ATPase, Pmc1 [Schizosaccharomyces pombe 972h-] gi|74624462|sp|Q9HDW7|ATC2_SCHPO RecName: Full=Calcium-transporting ATPase 2 gi|12140658|emb|CAC21470.1| vacuolar calcium transporting P-type ATPase, Pmc1 [Schizosaccharomyces pombe] Length = 1292 Score = 37.2 bits (85), Expect = 4.3, Method: Composition-based stats. Identities = 9/79 (11%), Positives = 30/79 (37%) Query: 9 LRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFC 68 + +G + ++ I +++++ + + + +L +S L+ +P P Sbjct: 449 IAKLGGAASALLFIVLLIEFLVRLKSNDSSSKNKGQEFLQILIVSVTLLVVAVPEGLPLA 508 Query: 69 FAMETTNVLTSMNRNTELL 87 + M ++ L+ Sbjct: 509 VTLALAFATNRMQKDNNLV 527 >gi|295838341|ref|ZP_06825274.1| ABC lipoprotein transporter, permease component [Streptomyces sp. SPB74] gi|197695862|gb|EDY42795.1| ABC lipoprotein transporter, permease component [Streptomyces sp. SPB74] Length = 855 Score = 37.2 bits (85), Expect = 4.3, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 35/89 (39%), Gaps = 3/89 (3%) Query: 31 QILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSM--NRNTELLI 88 ++L + +++ L + Y + + + N + + R EL + Sbjct: 243 RLLTQQESADENSKDTASFLDVMKYALLGFAGIAFLVGIFL-IVNTFSMLVAQRTRELGL 301 Query: 89 IDNTGTSRITLIKPVLFLAILLSIFLFIS 117 + G+SR + + VL A+LL + + Sbjct: 302 LRAVGSSRRQVNRSVLVEALLLGVVGSVL 330 >gi|42527544|ref|NP_972642.1| lipoprotein releasing system, permease protein, putative [Treponema denticola ATCC 35405] gi|41818129|gb|AAS12553.1| lipoprotein releasing system, permease protein, putative [Treponema denticola ATCC 35405] Length = 448 Score = 37.2 bits (85), Expect = 4.3, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 27/75 (36%) Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +V + + V+ M R E+ I+ G ++ L +L S+ I Sbjct: 290 MFLIVLVASANISSAIVMLVMERRREIAILKAAGAHPSSISLAFLLAGLLTSLGGIILGM 349 Query: 120 IIEPKCRSTIKQLSA 134 + I ++ A Sbjct: 350 PLGILAAIHINEIFA 364 >gi|152977394|ref|YP_001376911.1| hypothetical protein Bcer98_3722 [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152026146|gb|ABS23916.1| protein of unknown function DUF214 [Bacillus cytotoxicus NVH 391-98] Length = 297 Score = 37.2 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 27/132 (20%), Positives = 52/132 (39%), Gaps = 10/132 (7%) Query: 31 QILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIID 90 Q+ + + V + ++ I+L I+G L + F + T +T R+TE+ I+ Sbjct: 158 QVEKLFDTV-KTGRNIGIVL-IAGLLFTAM--------FLISNTIKITIYARSTEIEIMK 207 Query: 91 NTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLF 150 G + + P L + L I I I+ ++++ + + F L N F Sbjct: 208 LVGATNWFIRWPFLLEGLFLGILGSIIPIIVILSSYNSLQGMFNEKLGGTIFELLPYNPF 267 Query: 151 FRLDDDLYIKIS 162 L + I Sbjct: 268 VFQLAGLLVLIG 279 >gi|116622421|ref|YP_824577.1| hypothetical protein Acid_3318 [Candidatus Solibacter usitatus Ellin6076] gi|116225583|gb|ABJ84292.1| protein of unknown function DUF214 [Candidatus Solibacter usitatus Ellin6076] Length = 835 Score = 37.2 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 12/89 (13%), Positives = 33/89 (37%), Gaps = 4/89 (4%) Query: 60 VLPMVTPFCFA-METTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 ++ +V + + +++R E+ + G SR L++ +L ++++S+ + Sbjct: 306 MVGLVLLIACFNVANLLIARAVSRQKEIAVRLAVGASRWQLLRQLLIESLVMSVVGGAAG 365 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEE 147 + I+ L L Sbjct: 366 LFL---AVVMIRGLLHFLPGDEAALMLRA 391 >gi|325474498|gb|EGC77685.1| lipoprotein releasing system [Treponema denticola F0402] Length = 448 Score = 37.2 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 27/75 (36%) Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +V + + V+ M R E+ I+ G ++ L +L S+ I Sbjct: 290 MFLIVLVASANISSAIVMLVMERRREIAILKAAGAHPSSISLAFLLAGLLTSLGGIILGM 349 Query: 120 IIEPKCRSTIKQLSA 134 + I ++ A Sbjct: 350 PLGILAAIHINEIFA 364 >gi|229541528|ref|ZP_04430588.1| protein of unknown function DUF214 [Bacillus coagulans 36D1] gi|229325948|gb|EEN91623.1| protein of unknown function DUF214 [Bacillus coagulans 36D1] Length = 294 Score = 36.9 bits (84), Expect = 4.5, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 35/98 (35%) Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ ++ F + T +T R E+ I+ G + + P L + L I I Sbjct: 174 IIALLLTAMFLISNTIKITIFARRKEIEIMKLVGATNWFIRWPFLLEGLWLGILGSILPI 233 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL 157 ++ ++ ++ L+ + F D L Sbjct: 234 VLISFGYYSVYKIVEPKLQNNIIHMLDISPFIYGVDGL 271 >gi|299542036|ref|ZP_07052355.1| hypothetical protein BFZC1_23823 [Lysinibacillus fusiformis ZC1] gi|298725459|gb|EFI66104.1| hypothetical protein BFZC1_23823 [Lysinibacillus fusiformis ZC1] Length = 184 Score = 36.9 bits (84), Expect = 4.6, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 42/111 (37%), Gaps = 4/111 (3%) Query: 13 GRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCF--- 69 + L +VF+ W + Q N++ S I L + L P +L + Sbjct: 65 LMASLGGSCVLVFVVWNAPLSQPRNIIGGHFISAFIGLAMYSLLGPNILSISLGVGLTIF 124 Query: 70 AMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 M V+ ++II G L+ PVL A+++ F + N+ Sbjct: 125 FMAFLGVIHPPAGANPIIIILG-GYGWSYLLTPVLIGAVIIVFFGLLINNL 174 >gi|15902711|ref|NP_358261.1| cell division ABC transporter, permease protein FtsX [Streptococcus pneumoniae R6] gi|15458254|gb|AAK99471.1| Cell division protein FtsX [Streptococcus pneumoniae R6] Length = 329 Score = 36.9 bits (84), Expect = 4.6, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 46/117 (39%), Gaps = 2/117 (1%) Query: 46 LNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLF 105 L +++ G I +L + F + T +T ++R+ E+ I+ G + P L Sbjct: 197 LASFIRVWGLGIAALLIFIA--AFLISNTIRITIISRSREIQIMRLVGAKNSYIRGPFLL 254 Query: 106 LAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS 162 + + I+ +++ + Q K+ + S + +LF L L I Sbjct: 255 EGAFIGLLGAIAPSVLVFIVYQIVYQSVNKSLVGQNLSMISPDLFSPLMIALLFVIG 311 >gi|86604883|ref|YP_473646.1| permease [Synechococcus sp. JA-3-3Ab] gi|86553425|gb|ABC98383.1| putative permease [Synechococcus sp. JA-3-3Ab] Length = 305 Score = 36.9 bits (84), Expect = 4.7, Method: Composition-based stats. Identities = 13/100 (13%), Positives = 35/100 (35%), Gaps = 2/100 (2%) Query: 37 NLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSR 96 + + + +L++ I VL + + TT L M R E+ ++ G + Sbjct: 159 DRIVEQLAQIQEVLRLGSLSITGVLALTA--VAVITTTIRLVVMARRREIEVMQLVGATA 216 Query: 97 ITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKA 136 + P + L + + + + +++ + Sbjct: 217 TWIYLPFILQGCLFGVVSALGAWGLVLGSQQLLQEALEQL 256 >gi|116511802|ref|YP_809018.1| cell division protein FtsX [Lactococcus lactis subsp. cremoris SK11] gi|116107456|gb|ABJ72596.1| cell division protein FtsX [Lactococcus lactis subsp. cremoris SK11] Length = 311 Score = 36.9 bits (84), Expect = 4.8, Method: Composition-based stats. Identities = 15/102 (14%), Positives = 32/102 (31%) Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ F + T +T ++R E+ I+ G + P + + I ++ Sbjct: 192 ILLIFVAVFLISNTIRITILSRQREIQIMRLVGAKNGYIRWPFFLEGAWVGLLGSIIPSL 251 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS 162 I + + S E + F L I Sbjct: 252 IVAWAYRLAFVSLTPSLQSQKLSMYETSEFIPAIVGLMAIIG 293 >gi|28493167|ref|NP_787328.1| cell division protein FtsX [Tropheryma whipplei str. Twist] gi|28476207|gb|AAO44297.1| cell division protein FtsX [Tropheryma whipplei str. Twist] Length = 303 Score = 36.9 bits (84), Expect = 4.9, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 33/92 (35%), Gaps = 4/92 (4%) Query: 33 LQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF----CFAMETTNVLTSMNRNTELLI 88 + ++ V + LN + I T + + + TT L++ R E+ I Sbjct: 154 ISGVDSVVDQRQYLNQIFYILNLASVTSISIAAVMLIAAVMLIATTIRLSAFTRRKEIEI 213 Query: 89 IDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + G S + P + I + + +I Sbjct: 214 MRLVGASNFFVQAPFVLEGIFAASIGALLSSI 245 >gi|329941163|ref|ZP_08290442.1| ABC transporter transmembrane subunit [Streptomyces griseoaurantiacus M045] gi|329299694|gb|EGG43593.1| ABC transporter transmembrane subunit [Streptomyces griseoaurantiacus M045] Length = 859 Score = 36.9 bits (84), Expect = 5.0, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 3/71 (4%) Query: 49 LLKISGYLIPTVLPMVTPFCFAMETTNVLTSM--NRNTELLIIDNTGTSRITLIKPVLFL 106 L + Y + + + N + + R E+ ++ G+SR + + VL Sbjct: 263 FLDVMKYAMLGFAGVAFLVGIFL-IINTFSMLVAQRTREIGLMRAIGSSRRQVNRSVLVE 321 Query: 107 AILLSIFLFIS 117 A+LL + + Sbjct: 322 ALLLGVVGSVL 332 >gi|239930823|ref|ZP_04687776.1| ABC transporter integral membrane protein [Streptomyces ghanaensis ATCC 14672] gi|291439191|ref|ZP_06578581.1| ABC transporter integral membrane protein [Streptomyces ghanaensis ATCC 14672] gi|291342086|gb|EFE69042.1| ABC transporter integral membrane protein [Streptomyces ghanaensis ATCC 14672] Length = 842 Score = 36.9 bits (84), Expect = 5.0, Method: Composition-based stats. Identities = 11/65 (16%), Positives = 24/65 (36%), Gaps = 5/65 (7%) Query: 61 LPMVTPFCFAMETTNVLTSM-----NRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLF 115 L + + T + + R EL ++ G SR + + VL A ++ Sbjct: 267 LLVFAGIALFVGTFIIANTFTMLVAQRTRELALMRAVGASRRQVTRSVLIEAFVVGTVAA 326 Query: 116 ISENI 120 ++ + Sbjct: 327 VAGLV 331 >gi|118590505|ref|ZP_01547907.1| PAS:GGDEF protein [Stappia aggregata IAM 12614] gi|118436968|gb|EAV43607.1| PAS:GGDEF protein [Stappia aggregata IAM 12614] Length = 919 Score = 36.9 bits (84), Expect = 5.0, Method: Composition-based stats. Identities = 27/195 (13%), Positives = 55/195 (28%), Gaps = 32/195 (16%) Query: 97 ITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD 156 I L P LF +L++ N I + + + S L F + Sbjct: 280 IRLFTPFLFYTAILAVGAAFLVNRITSAGLGRLLTYAMSLRQDKVVSPPPPGLIFEFNKL 339 Query: 157 LYIK------ISKYNP------NNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILN 204 + + + + ++ G+ + + + + +N Sbjct: 340 ATMFQAAFESVRNRDAQFKDMIDGSMHGVLVH-------------------ANHRILYVN 380 Query: 205 DGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPEL 264 D + D + S TL + + + + + P + Sbjct: 381 DALLKMCGYEPGDPKQLV-DSPTLVLYAPEEHSRLRSYYNMRENGSGAPRAYEVKGIRKD 439 Query: 265 LETYRSEFHKRLTQW 279 ET E H RLT+W Sbjct: 440 GETLWLEQHVRLTEW 454 >gi|28572720|ref|NP_789500.1| cell division protein FtsX [Tropheryma whipplei TW08/27] gi|28410853|emb|CAD67238.1| cell division protein FtsX [Tropheryma whipplei TW08/27] Length = 303 Score = 36.9 bits (84), Expect = 5.0, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 33/92 (35%), Gaps = 4/92 (4%) Query: 33 LQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF----CFAMETTNVLTSMNRNTELLI 88 + ++ V + LN + I T + + + TT L++ R E+ I Sbjct: 154 ISGVDSVVDQRQYLNQIFYILNLASVTSISIAAVMLIAAVMLIATTIRLSAFTRRKEIEI 213 Query: 89 IDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + G S + P + I + + +I Sbjct: 214 MRLVGASNFFVQAPFVLEGIFAASIGALLSSI 245 >gi|302551939|ref|ZP_07304281.1| ABC transporter integral membrane protein [Streptomyces viridochromogenes DSM 40736] gi|302469557|gb|EFL32650.1| ABC transporter integral membrane protein [Streptomyces viridochromogenes DSM 40736] Length = 844 Score = 36.9 bits (84), Expect = 5.2, Method: Composition-based stats. Identities = 11/71 (15%), Positives = 24/71 (33%), Gaps = 5/71 (7%) Query: 56 LIPTVLPMVTPFCFAMETTNVLTSM-----NRNTELLIIDNTGTSRITLIKPVLFLAILL 110 + VL + + + R E+ ++ G SR + + VL A L+ Sbjct: 261 SLKQVLLGFAGIALFVGVFLISNTFTMLVAQRTKEIALMRAVGASRRQITRSVLAEAALV 320 Query: 111 SIFLFISENII 121 + ++ Sbjct: 321 GLVASAIGFVL 331 >gi|261338114|ref|ZP_05965998.1| putative cell division protein [Bifidobacterium gallicum DSM 20093] gi|270276736|gb|EFA22590.1| putative cell division protein [Bifidobacterium gallicum DSM 20093] Length = 307 Score = 36.9 bits (84), Expect = 5.2, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 25/59 (42%) Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 MV TT +++ +R+ E I+ G S T+ P + ++ S+ + + Sbjct: 191 VMVLVAIMLTGTTIRMSAASRSEETEIMRLVGASNWTIRLPFILEGVIASLLGSVLSCV 249 >gi|158520526|ref|YP_001528396.1| hypothetical protein Dole_0509 [Desulfococcus oleovorans Hxd3] gi|158509352|gb|ABW66319.1| protein of unknown function DUF1239 [Desulfococcus oleovorans Hxd3] Length = 190 Score = 36.9 bits (84), Expect = 5.4, Method: Composition-based stats. Identities = 11/115 (9%), Positives = 35/115 (30%) Query: 94 TSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRL 153 S +I L ++ + + + P + ++ ++++E Sbjct: 7 ISLFLMITVFAALGAVIYLLVQSRPLSVPPAATEQADTGVDISMTGVSQTFVQEGRISHT 66 Query: 154 DDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEV 208 + + + + + + T + A+ G + + L+ G V Sbjct: 67 LTADTASLLARDKKAVFENVTLTFLAEDGTPSVVTAKQGELSTETGDATLSGGVV 121 >gi|306829188|ref|ZP_07462378.1| cell division protein FtsX [Streptococcus mitis ATCC 6249] gi|304428274|gb|EFM31364.1| cell division protein FtsX [Streptococcus mitis ATCC 6249] Length = 311 Score = 36.9 bits (84), Expect = 5.4, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 47/117 (40%), Gaps = 2/117 (1%) Query: 46 LNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLF 105 L +++ G +I +L + F + T +T ++R+ E+ I+ G + P L Sbjct: 179 LASFIRVWGLIIAGLLIFIAVF--LISNTIRITIISRSREIQIMRLVGAKNSYIRGPFLL 236 Query: 106 LAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS 162 + +F +++ + + Q K+ + S + +LF L L I Sbjct: 237 EGAFIGLFGAAIPSVLVFFIYNMVYQSVNKSLVGQNLSMITPDLFIPLMTVLLFVIG 293 >gi|333026441|ref|ZP_08454505.1| putative ABC transporter integral membrane protein [Streptomyces sp. Tu6071] gi|332746293|gb|EGJ76734.1| putative ABC transporter integral membrane protein [Streptomyces sp. Tu6071] Length = 838 Score = 36.9 bits (84), Expect = 5.5, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 28/71 (39%), Gaps = 3/71 (4%) Query: 49 LLKISGYLIPTVLPMVTPFCFAMETTNVLTSM--NRNTELLIIDNTGTSRITLIKPVLFL 106 L + Y + + + N + + R EL ++ G+SR + + VL Sbjct: 244 FLDVMKYALLGFAGIAFLVGIFL-IVNTFSMLVAQRTRELGLLRAVGSSRRQVNRSVLVE 302 Query: 107 AILLSIFLFIS 117 A+LL + + Sbjct: 303 ALLLGVVGSVL 313 >gi|242008257|ref|XP_002424923.1| sodium antiporter, putative [Pediculus humanus corporis] gi|212508537|gb|EEB12185.1| sodium antiporter, putative [Pediculus humanus corporis] Length = 670 Score = 36.9 bits (84), Expect = 5.5, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 26/46 (56%) Query: 307 PIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 P+ I + FG+ WGF ++ +P+ IP+ L LFC +I +L Sbjct: 376 PVSIIMGFGFGILWGFLSKFVPVKDDPFVIPLRVLLLFCGGTIAVL 421 >gi|125624348|ref|YP_001032831.1| cell division protein ftsX-like protein [Lactococcus lactis subsp. cremoris MG1363] gi|124493156|emb|CAL98120.1| cell division protein ftsX homolog [Lactococcus lactis subsp. cremoris MG1363] gi|300071132|gb|ADJ60532.1| cell division protein [Lactococcus lactis subsp. cremoris NZ9000] Length = 311 Score = 36.9 bits (84), Expect = 5.5, Method: Composition-based stats. Identities = 10/67 (14%), Positives = 24/67 (35%) Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ F + T +T ++R E+ I+ G + P + + I ++ Sbjct: 192 ILLIFVAVFLISNTIRITILSRQREIQIMRLVGAKNGYIRWPFFLEGAWVGLLGSIIPSL 251 Query: 121 IEPKCRS 127 I Sbjct: 252 IVAWAYR 258 >gi|52081526|ref|YP_080317.1| acetoin transport system substrate binding protein YtrF [Bacillus licheniformis ATCC 14580] gi|52786905|ref|YP_092734.1| YtrF [Bacillus licheniformis ATCC 14580] gi|52004737|gb|AAU24679.1| possible acetoin transport system substrate binding protein YtrF [Bacillus licheniformis ATCC 14580] gi|52349407|gb|AAU42041.1| YtrF [Bacillus licheniformis ATCC 14580] Length = 443 Score = 36.9 bits (84), Expect = 5.5, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 42/119 (35%), Gaps = 20/119 (16%) Query: 35 RINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMN-----RNTELLII 89 ++ ++ +S+N+ + I + V + + +M R E+ I+ Sbjct: 280 YVDSITKKLDSINLF--FMAFKIGLIFVGV--IAVFISAIGIFNTMTMAVTERTQEIGIM 335 Query: 90 DNTGTSRITLIKPVLF-----------LAILLSIFLFISENIIEPKCRSTIKQLSAKAQ 137 G S + K L L I++S + N I P S++ + A A Sbjct: 336 KAIGASPNVIRKMFLLESAYIGILGSVLGIIISYGVSFLVNKIIPVILSSVSEGEASAA 394 >gi|294629784|ref|ZP_06708344.1| ABC lipoprotein transporter, permease component [Streptomyces sp. e14] gi|292833117|gb|EFF91466.1| ABC lipoprotein transporter, permease component [Streptomyces sp. e14] Length = 859 Score = 36.9 bits (84), Expect = 5.6, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 33/83 (39%), Gaps = 3/83 (3%) Query: 37 NLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSM--NRNTELLIIDNTGT 94 + ++ + L L + Y + + + N + + R E+ ++ G+ Sbjct: 251 EVADANRKELGSFLDVMKYAMLGFAGIAFLVGIFL-IINTFSMLVTQRTREIGLMRAIGS 309 Query: 95 SRITLIKPVLFLAILLSIFLFIS 117 SR + + VL A+LL + + Sbjct: 310 SRKQVNRSVLAEALLLGVTGSVL 332 >gi|318060489|ref|ZP_07979212.1| ABC transporter integral membrane protein [Streptomyces sp. SA3_actG] Length = 855 Score = 36.9 bits (84), Expect = 5.7, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 28/71 (39%), Gaps = 3/71 (4%) Query: 49 LLKISGYLIPTVLPMVTPFCFAMETTNVLTSM--NRNTELLIIDNTGTSRITLIKPVLFL 106 L + Y + + + N + + R EL ++ G+SR + + VL Sbjct: 261 FLDVMKYALLGFAGIAFLVGIFL-IVNTFSMLVAQRTRELGLLRAVGSSRRQVNRSVLVE 319 Query: 107 AILLSIFLFIS 117 A+LL + + Sbjct: 320 ALLLGVVGSVL 330 >gi|315606124|ref|ZP_07881155.1| cell division protein [Actinomyces sp. oral taxon 180 str. F0310] gi|315312406|gb|EFU60492.1| cell division protein [Actinomyces sp. oral taxon 180 str. F0310] Length = 304 Score = 36.9 bits (84), Expect = 5.7, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 24/57 (42%) Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 MV + TT L++M+R E I+ G S + + P + L ++ + Sbjct: 189 MVVAAVLLISTTIRLSAMSREQETQIMRYVGASNLFIQAPFMIEGALAALVGAVFAI 245 >gi|302519745|ref|ZP_07272087.1| ABC transporter integral membrane protein [Streptomyces sp. SPB78] gi|302428640|gb|EFL00456.1| ABC transporter integral membrane protein [Streptomyces sp. SPB78] Length = 855 Score = 36.9 bits (84), Expect = 5.7, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 28/71 (39%), Gaps = 3/71 (4%) Query: 49 LLKISGYLIPTVLPMVTPFCFAMETTNVLTSM--NRNTELLIIDNTGTSRITLIKPVLFL 106 L + Y + + + N + + R EL ++ G+SR + + VL Sbjct: 261 FLDVMKYALLGFAGIAFLVGIFL-IVNTFSMLVAQRTRELGLLRAVGSSRRQVNRSVLVE 319 Query: 107 AILLSIFLFIS 117 A+LL + + Sbjct: 320 ALLLGVVGSVL 330 >gi|26553541|ref|NP_757475.1| permease [Mycoplasma penetrans HF-2] gi|26453547|dbj|BAC43879.1| predicted permeases [Mycoplasma penetrans HF-2] Length = 1786 Score = 36.9 bits (84), Expect = 5.7, Method: Composition-based stats. Identities = 11/119 (9%), Positives = 35/119 (29%), Gaps = 5/119 (4%) Query: 37 NLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNT-ELLIIDNTGTS 95 NL+++ ++ ++ ++ + + + + +N L + G S Sbjct: 863 NLLTARISYPRVIAGYVNIFAIILIVVLMVIGIYLSSLLIKIYVEKNRIPLAVAKANGIS 922 Query: 96 RITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLD 154 + + I + I ++ + F + E+ F + Sbjct: 923 TWQISLSLSVFGIAAAFISGILGYVVAYFAQGMF----LGILNNFWFIPIGEHTFSAIG 977 >gi|257065407|ref|YP_003145079.1| ABC-type antimicrobial peptide transport system, ATPase component [Slackia heliotrinireducens DSM 20476] gi|256793060|gb|ACV23730.1| ABC-type antimicrobial peptide transport system, ATPase component [Slackia heliotrinireducens DSM 20476] Length = 888 Score = 36.5 bits (83), Expect = 5.8, Method: Composition-based stats. Identities = 9/74 (12%), Positives = 31/74 (41%), Gaps = 1/74 (1%) Query: 31 QILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF-CFAMETTNVLTSMNRNTELLII 89 Q++ ++V + S+ ++ Y++ + + + ++ + R E+ I+ Sbjct: 734 QVIHYTDIVGTLMSSVTSIVNSITYILIAFVAISLVVSSIMIGIITYISVLERTKEIGIL 793 Query: 90 DNTGTSRITLIKPV 103 + G S+ + + Sbjct: 794 RSIGASKKDISRVF 807 >gi|290959822|ref|YP_003491004.1| ABC transporter transmembrane protein [Streptomyces scabiei 87.22] gi|260649348|emb|CBG72463.1| putative ABC transport system transmembrane subunit [Streptomyces scabiei 87.22] Length = 859 Score = 36.5 bits (83), Expect = 6.0, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 34/83 (40%), Gaps = 3/83 (3%) Query: 37 NLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSM--NRNTELLIIDNTGT 94 + ++ + + + + Y + + + N + + R E+ ++ G+ Sbjct: 251 EVADANAKDVGEFMGVMKYAMLGFAGIAFLVGIFL-IINTFSMLVAQRTREIGLMRAIGS 309 Query: 95 SRITLIKPVLFLAILLSIFLFIS 117 SR + + VL A+LL +F + Sbjct: 310 SRGQVNRSVLVEALLLGVFGSVL 332 >gi|73669871|ref|YP_305886.1| hypothetical protein Mbar_A2385 [Methanosarcina barkeri str. Fusaro] gi|72397033|gb|AAZ71306.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro] Length = 387 Score = 36.5 bits (83), Expect = 6.0, Method: Composition-based stats. Identities = 13/100 (13%), Positives = 36/100 (36%), Gaps = 9/100 (9%) Query: 67 FCFAMETTNVLTSM-----NRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + + ++L M R E+ I+ G S+ ++K + +++L I I+ Sbjct: 266 ISLVVASVSILNIMLMSVTERTKEIGIMKAVGASKKDIMKMFVLESLILGIIASFIGGIL 325 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKI 161 + ++ ++ + +F + + I Sbjct: 326 ---SLGVVFVITDLILKDVSSLFDR-GVFLYVVGGIVFGI 361 >gi|72162876|ref|YP_290533.1| cell division protein FtsX [Thermobifida fusca YX] gi|71916608|gb|AAZ56510.1| cell division protein FtsX [Thermobifida fusca YX] Length = 302 Score = 36.5 bits (83), Expect = 6.1, Method: Composition-based stats. Identities = 15/98 (15%), Positives = 36/98 (36%), Gaps = 4/98 (4%) Query: 36 INLVSSSTESLNILLKISGYL----IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDN 91 +++VS+ + L+ ++ L + + + + T L++ +R E I+ Sbjct: 157 VDMVSNDKDVLDRFFELFDVLKWAALTFAIVQLAAAALLIGNTIRLSAYSRRRETGIMRL 216 Query: 92 TGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTI 129 G S + P L + + I + R + Sbjct: 217 VGASNFYIQLPFLLEGAICGLIGGIIASGFIVAARYVL 254 >gi|317150012|ref|XP_001823735.2| plasma membrane calcium-transporting ATPase [Aspergillus oryzae RIB40] Length = 1047 Score = 36.5 bits (83), Expect = 6.1, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 31/92 (33%), Gaps = 1/92 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + YI G + I+FI ++ + + + L IS ++ Sbjct: 321 LNVLAKYI-ANFGGLAALVLFIILFIKFLTSLPHSSLTPTEKGQQFLDLFIISLTVVVIA 379 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNT 92 +P P + T M ++ L+ + + Sbjct: 380 VPEGLPLTVTLALAFATTRMLKDHNLVRMLSA 411 >gi|167755605|ref|ZP_02427732.1| hypothetical protein CLORAM_01119 [Clostridium ramosum DSM 1402] gi|167704544|gb|EDS19123.1| hypothetical protein CLORAM_01119 [Clostridium ramosum DSM 1402] Length = 303 Score = 36.5 bits (83), Expect = 6.2, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 43/121 (35%), Gaps = 3/121 (2%) Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 ++ + F + T +T R TE+ I+ G S + P + +L+ + I Sbjct: 182 FIVGLAIIALFMIANTIKITITARQTEISIMRMVGASNWYIRIPFMLEGMLIGLIGSIIP 241 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 I+ + + A ++ + F R D + I+ L G F+ Sbjct: 242 IIVLVYGYGMVYDYANGALMSAMLALKPPMPFIR---DFSLVIAAVGAGVGLVGSFVSIR 298 Query: 179 R 179 R Sbjct: 299 R 299 >gi|53791398|dbj|BAD53435.1| unknown protein [Oryza sativa Japonica Group] gi|53793535|dbj|BAD52984.1| unknown protein [Oryza sativa Japonica Group] Length = 334 Score = 36.5 bits (83), Expect = 6.2, Method: Composition-based stats. Identities = 21/142 (14%), Positives = 50/142 (35%), Gaps = 13/142 (9%) Query: 124 KCRSTIKQLSAKAQLALTFSYLEEN---LFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 K + ++ + L + ++ D DL I K + + D+R Sbjct: 196 KGFKVFGENVSRIRERLMYDEVKNGYQSRMTHSDADL-FFIDKQSGGEVM------DTRA 248 Query: 181 TQTHKIY---YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + A + + + + +G RK ++D +++KF Y ++ S Sbjct: 249 GEDEEAVEMETADNAFMAAAQSMKAMANGMRKRKDCGAEDANVVKFVKYKVEDSSVKDYF 308 Query: 238 IVLKANDQNLSFLLNPNPNNPN 259 + + S + NP ++ Sbjct: 309 LSANNGMSSGSEVENPQSDDEM 330 >gi|304316121|ref|YP_003851266.1| hypothetical protein Tthe_0621 [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777623|gb|ADL68182.1| protein of unknown function DUF214 [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 295 Score = 36.5 bits (83), Expect = 6.3, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 33/84 (39%), Gaps = 2/84 (2%) Query: 39 VSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRIT 98 V + +++I G + +L +++ + T L R E+ I+ G + Sbjct: 158 VVDKLLGIIKIIRIVGLCVILILFIIS--VVIISNTIKLGVFARRREINIMKYIGATDWF 215 Query: 99 LIKPVLFLAILLSIFLFISENIIE 122 + P L I+L + I +I Sbjct: 216 IRWPFLVEGIVLGLVGSILAIVIL 239 >gi|297597139|ref|NP_001043490.2| Os01g0600300 [Oryza sativa Japonica Group] gi|255673428|dbj|BAF05404.2| Os01g0600300 [Oryza sativa Japonica Group] Length = 355 Score = 36.5 bits (83), Expect = 6.3, Method: Composition-based stats. Identities = 21/142 (14%), Positives = 50/142 (35%), Gaps = 13/142 (9%) Query: 124 KCRSTIKQLSAKAQLALTFSYLEEN---LFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 K + ++ + L + ++ D DL I K + + D+R Sbjct: 217 KGFKVFGENVSRIRERLMYDEVKNGYQSRMTHSDADL-FFIDKQSGGEVM------DTRA 269 Query: 181 TQTHKIY---YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + A + + + + +G RK ++D +++KF Y ++ S Sbjct: 270 GEDEEAVEMETADNAFMAAAQSMKAMANGMRKRKDCGAEDANVVKFVKYKVEDSSVKDYF 329 Query: 238 IVLKANDQNLSFLLNPNPNNPN 259 + + S + NP ++ Sbjct: 330 LSANNGMSSGSEVENPQSDDEM 351 >gi|218188592|gb|EEC71019.1| hypothetical protein OsI_02713 [Oryza sativa Indica Group] Length = 334 Score = 36.5 bits (83), Expect = 6.3, Method: Composition-based stats. Identities = 21/142 (14%), Positives = 50/142 (35%), Gaps = 13/142 (9%) Query: 124 KCRSTIKQLSAKAQLALTFSYLEEN---LFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 K + ++ + L + ++ D DL I K + + D+R Sbjct: 196 KGFKVFGENVSRIRERLMYDEVKNGYQSRMTHSDADL-FFIDKLSGGEVM------DTRA 248 Query: 181 TQTHKIY---YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + A + + + + +G RK ++D +++KF Y ++ S Sbjct: 249 GEDEEAVEMETADNAFMAAAQSMKAMANGMRKRKDCGAEDANVVKFVKYKVEDSSVKDYF 308 Query: 238 IVLKANDQNLSFLLNPNPNNPN 259 + + S + NP ++ Sbjct: 309 LSANNGMSSGSEVENPQSDDEM 330 >gi|331266787|ref|YP_004326417.1| cell wall hydrolase/autolysin [Streptococcus oralis Uo5] gi|326683459|emb|CBZ01077.1| cell wall hydrolase/autolysin [Streptococcus oralis Uo5] Length = 599 Score = 36.5 bits (83), Expect = 6.5, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 21/58 (36%), Gaps = 2/58 (3%) Query: 187 YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAND 244 Y A SG I D+ I +G + +S FK Y A + +K D Sbjct: 198 YVAPSGKISQDKWEKI--NGSWYYFDKDGGMLSATTFKGYLFNQSGAMAENNWVKIKD 253 >gi|322374689|ref|ZP_08049203.1| surface protein PspA [Streptococcus sp. C300] gi|321280189|gb|EFX57228.1| surface protein PspA [Streptococcus sp. C300] Length = 599 Score = 36.5 bits (83), Expect = 6.5, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 21/58 (36%), Gaps = 2/58 (3%) Query: 187 YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAND 244 Y A SG I D+ I +G + +S FK Y A + +K D Sbjct: 198 YVAPSGKISQDKWEKI--NGSWYYFDKDGGMLSATTFKGYLFNQSGAMAENNWVKIKD 253 >gi|315612779|ref|ZP_07887690.1| surface protein PspC [Streptococcus sanguinis ATCC 49296] gi|315314889|gb|EFU62930.1| surface protein PspC [Streptococcus sanguinis ATCC 49296] Length = 599 Score = 36.5 bits (83), Expect = 6.5, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 21/58 (36%), Gaps = 2/58 (3%) Query: 187 YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAND 244 Y A SG I D+ I +G + +S FK Y A + +K D Sbjct: 198 YVAPSGKISQDKWEKI--NGSWYYFDKDGGMLSATTFKGYLFNQSGAMAENNWVKIKD 253 >gi|296268779|ref|YP_003651411.1| hypothetical protein Tbis_0794 [Thermobispora bispora DSM 43833] gi|296091566|gb|ADG87518.1| protein of unknown function DUF214 [Thermobispora bispora DSM 43833] Length = 299 Score = 36.5 bits (83), Expect = 6.5, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 32/80 (40%), Gaps = 1/80 (1%) Query: 44 ESLNILL-KISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKP 102 +SL + K+ + + M+ + T L++ NR E I+ G S + + P Sbjct: 167 QSLFGFMGKLRNMALGVAILMLIAATLLIGNTVRLSAYNRRRETAIMRLVGASNLYIQLP 226 Query: 103 VLFLAILLSIFLFISENIIE 122 + ++ + + ++ Sbjct: 227 FVMEGLIAGLIGGVLAAVLL 246 >gi|327441617|dbj|BAK17982.1| ABC-type antimicrobial peptide transport system, permease component [Solibacillus silvestris StLB046] Length = 442 Score = 36.5 bits (83), Expect = 6.6, Method: Composition-based stats. Identities = 14/125 (11%), Positives = 42/125 (33%), Gaps = 12/125 (9%) Query: 50 LKISGYLIPTVLPMVTPFCFAMETTNVLTSMN-----RNTELLIIDNTGTSRITLIKPVL 104 L + ++ L V + + + +M R E+ ++ G S + + L Sbjct: 293 LNVFFLVLKAGLVFVGTIAVLIASIGIFNTMTMAVTERTREIGVLKAIGASPKLIQRLFL 352 Query: 105 ----FLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIK 160 F+ ++ ++ ++ + + + A F+ ++ F + L + Sbjct: 353 MESTFIGVIGTVLAIAISYVVSFAANALLPLILKAATGEDGFNNVQ---FSAIPWQLVVI 409 Query: 161 ISKYN 165 + Sbjct: 410 AGAIS 414 >gi|325571385|ref|ZP_08146885.1| cell division protein FtsX [Enterococcus casseliflavus ATCC 12755] gi|325155861|gb|EGC68057.1| cell division protein FtsX [Enterococcus casseliflavus ATCC 12755] Length = 294 Score = 36.5 bits (83), Expect = 6.6, Method: Composition-based stats. Identities = 16/125 (12%), Positives = 43/125 (34%), Gaps = 4/125 (3%) Query: 42 STESLNILLKISG----YLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRI 97 +S + + ++S + + + ++ F + T +T ++R E+ I+ G Sbjct: 152 GGDSSDRIFELSAAVRTWGLAAAVLLIFVAMFLISNTIRITILSRQREIQIMRLVGAKNG 211 Query: 98 TLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL 157 + P + + I + + + + L +S + N+F + Sbjct: 212 YIRWPFFLEGGWIGLLGSIVPIALMYFGYHQVYAMVNPSLLRSNYSLIAPNMFLIQVCGV 271 Query: 158 YIKIS 162 I Sbjct: 272 MALIG 276 >gi|257867490|ref|ZP_05647143.1| cell division protein [Enterococcus casseliflavus EC30] gi|257873819|ref|ZP_05653472.1| cell division protein [Enterococcus casseliflavus EC10] gi|257877569|ref|ZP_05657222.1| cell division protein [Enterococcus casseliflavus EC20] gi|257801546|gb|EEV30476.1| cell division protein [Enterococcus casseliflavus EC30] gi|257807983|gb|EEV36805.1| cell division protein [Enterococcus casseliflavus EC10] gi|257811735|gb|EEV40555.1| cell division protein [Enterococcus casseliflavus EC20] Length = 309 Score = 36.5 bits (83), Expect = 6.6, Method: Composition-based stats. Identities = 16/125 (12%), Positives = 43/125 (34%), Gaps = 4/125 (3%) Query: 42 STESLNILLKISG----YLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRI 97 +S + + ++S + + + ++ F + T +T ++R E+ I+ G Sbjct: 167 GGDSSDRIFELSAAVRTWGLAAAVLLIFVAMFLISNTIRITILSRQREIQIMRLVGAKNG 226 Query: 98 TLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL 157 + P + + I + + + + L +S + N+F + Sbjct: 227 YIRWPFFLEGGWIGLLGSIVPIALMYFGYHQVYAMVNPSLLRSNYSLIAPNMFLLQVCGV 286 Query: 158 YIKIS 162 I Sbjct: 287 MALIG 291 >gi|162449381|ref|YP_001611748.1| lipoprotein releasing system transmembrane protein lolC [Sorangium cellulosum 'So ce 56'] gi|161159963|emb|CAN91268.1| Lipoprotein releasing system transmembrane protein lolC [Sorangium cellulosum 'So ce 56'] Length = 409 Score = 36.5 bits (83), Expect = 6.6, Method: Composition-based stats. Identities = 8/61 (13%), Positives = 27/61 (44%) Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +V + + +++ + ++ E+ ++ GTSR +++ L +L + + Sbjct: 285 FFVVLAVALGIASVLIVSVVQKSREIGVLRAVGTSRGRVLRIFLIQGAVLGLLGSFVGSA 344 Query: 121 I 121 + Sbjct: 345 L 345 >gi|134076937|emb|CAK45346.1| unnamed protein product [Aspergillus niger] Length = 1433 Score = 36.5 bits (83), Expect = 6.6, Method: Composition-based stats. Identities = 10/83 (12%), Positives = 31/83 (37%), Gaps = 3/83 (3%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS---STESLNILLKISGYLIPTVLPMV 64 +L ++ ++F+ I+ L ++ + ++ + ++ +I +P Sbjct: 512 VLAEYIAKLGLASGLLLFVVLFIKFLAQLKDMGGASEKGQAFLQIFIVAVTVIVVAVPEG 571 Query: 65 TPFCFAMETTNVLTSMNRNTELL 87 P + T M ++ L+ Sbjct: 572 LPLAVTLALAFATTRMLKDNNLV 594 >gi|254585749|ref|XP_002498442.1| ZYRO0G10362p [Zygosaccharomyces rouxii] gi|238941336|emb|CAR29509.1| ZYRO0G10362p [Zygosaccharomyces rouxii] Length = 1130 Score = 36.5 bits (83), Expect = 6.7, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 31/93 (33%), Gaps = 9/93 (9%) Query: 9 LRCIGRSFLMSCLFIVFIAWVIQIL-------QRINL-VSSSTESLNILLKISGYLIPTV 60 L F + I+F+ IQ L + +L + +L S +I Sbjct: 303 LSDSISVFGCASAIILFLVLFIQFLFDIREGGRLADLPAAKRGSQFMSILITSITVIVVA 362 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELL-IIDNT 92 +P P + T M ++ L+ ++ Sbjct: 363 VPEGLPLAVTLSLAFATTRMTKDGNLVRVLSAC 395 >gi|237734353|ref|ZP_04564834.1| conserved hypothetical protein [Mollicutes bacterium D7] gi|229382583|gb|EEO32674.1| conserved hypothetical protein [Coprobacillus sp. D7] Length = 296 Score = 36.5 bits (83), Expect = 6.7, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 43/121 (35%), Gaps = 3/121 (2%) Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 ++ + F + T +T R TE+ I+ G S + P + +L+ + I Sbjct: 175 FIVGLAIIALFMIANTIKITITARQTEISIMRMVGASNWYIRIPFMLEGMLIGLIGSIIP 234 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 I+ + + A ++ + F R D + I+ L G F+ Sbjct: 235 IIVLVYGYGMVYDYANGALMSAMLALKPPMPFIR---DFSLVIAAVGAGVGLVGSFVSIR 291 Query: 179 R 179 R Sbjct: 292 R 292 >gi|297200205|ref|ZP_06917602.1| ABC transporter integral membrane protein [Streptomyces sviceus ATCC 29083] gi|197713342|gb|EDY57376.1| ABC transporter integral membrane protein [Streptomyces sviceus ATCC 29083] Length = 842 Score = 36.5 bits (83), Expect = 6.9, Method: Composition-based stats. Identities = 11/65 (16%), Positives = 25/65 (38%), Gaps = 5/65 (7%) Query: 61 LPMVTPFCFAMETTNVLTSM-----NRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLF 115 L + + T + + R EL ++ G SR + + VL A ++ + Sbjct: 267 LLVFAGIALFVGTFIIANTFTMLVAQRTKELALLRAVGASRRQVTRSVLVEAFVVGLIAA 326 Query: 116 ISENI 120 ++ + Sbjct: 327 VTGLV 331 >gi|322376935|ref|ZP_08051428.1| cell division ABC transporter, permease protein FtsX [Streptococcus sp. M334] gi|321282742|gb|EFX59749.1| cell division ABC transporter, permease protein FtsX [Streptococcus sp. M334] Length = 329 Score = 36.5 bits (83), Expect = 7.0, Method: Composition-based stats. Identities = 20/117 (17%), Positives = 44/117 (37%), Gaps = 2/117 (1%) Query: 46 LNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLF 105 L +++ G +I +L + F + T +T ++R+ E+ I+ G + P L Sbjct: 197 LASFIRVWGLVIAGLLIFIAVF--LISNTIRITIISRSREIQIMRLVGAKNGYIRGPFLL 254 Query: 106 LAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS 162 + + +++ + Q K+ + S + +F L L I Sbjct: 255 EGAFIGLLGATLPSVLVFVVYQMVYQSVNKSLVGQNLSMISPEVFSPLMIALLFMIG 311 >gi|317030897|ref|XP_001392426.2| P-type calcium ATPase [Aspergillus niger CBS 513.88] Length = 1421 Score = 36.5 bits (83), Expect = 7.0, Method: Composition-based stats. Identities = 10/83 (12%), Positives = 31/83 (37%), Gaps = 3/83 (3%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS---STESLNILLKISGYLIPTVLPMV 64 +L ++ ++F+ I+ L ++ + ++ + ++ +I +P Sbjct: 500 VLAEYIAKLGLASGLLLFVVLFIKFLAQLKDMGGASEKGQAFLQIFIVAVTVIVVAVPEG 559 Query: 65 TPFCFAMETTNVLTSMNRNTELL 87 P + T M ++ L+ Sbjct: 560 LPLAVTLALAFATTRMLKDNNLV 582 >gi|290975119|ref|XP_002670291.1| predicted protein [Naegleria gruberi] gi|284083848|gb|EFC37547.1| predicted protein [Naegleria gruberi] Length = 375 Score = 36.5 bits (83), Expect = 7.0, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 26/73 (35%), Gaps = 4/73 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRI---NLVSSSTESLNILLKISGYLI 57 M Y SF ++ L + FI W L V +L K+ G +I Sbjct: 1 MAIVNRYGFFKAL-SFGVAFLSVTFIVWGTVSLGLWYGGYNVVDGLTTLGDYFKVCGLMI 59 Query: 58 PTVLPMVTPFCFA 70 TV+ ++ F Sbjct: 60 MTVMSLIQTFAIF 72 >gi|258651045|ref|YP_003200201.1| hypothetical protein Namu_0800 [Nakamurella multipartita DSM 44233] gi|258554270|gb|ACV77212.1| protein of unknown function DUF214 [Nakamurella multipartita DSM 44233] Length = 848 Score = 36.5 bits (83), Expect = 7.0, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 30/77 (38%), Gaps = 5/77 (6%) Query: 50 LKISGYLIPTVLPMVTPFCFAMETTNVLTSMN-----RNTELLIIDNTGTSRITLIKPVL 104 L+ I T L + + T +L + + R EL ++ G SR + + VL Sbjct: 267 LEQGLSFITTFLLVFAAVALVVGTFLILNTFSIIVAQRTRELALLRALGASRRQVTRSVL 326 Query: 105 FLAILLSIFLFISENII 121 A+++ + + Sbjct: 327 IEALVVGLVGSTIGLAL 343 >gi|269955836|ref|YP_003325625.1| cell division protein FtsX [Xylanimonas cellulosilytica DSM 15894] gi|269304517|gb|ACZ30067.1| cell division protein FtsX [Xylanimonas cellulosilytica DSM 15894] Length = 304 Score = 36.5 bits (83), Expect = 7.0, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 28/68 (41%) Query: 51 KISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILL 110 ++S + M+ + TT L++++R E I+ G S + + P L + Sbjct: 177 RLSMLAAGLAVVMLLTAALLITTTIRLSAVSRRRETGIMRLVGASNLFIQLPFLLEGAIA 236 Query: 111 SIFLFISE 118 ++ + Sbjct: 237 AVVGSLLA 244 >gi|225055349|gb|ACN80636.1| Sio5 [Streptomyces sioyaensis] Length = 866 Score = 36.5 bits (83), Expect = 7.0, Method: Composition-based stats. Identities = 10/64 (15%), Positives = 24/64 (37%), Gaps = 5/64 (7%) Query: 56 LIPTVLPMVTPFCFAMETTNVLTSM-----NRNTELLIIDNTGTSRITLIKPVLFLAILL 110 + +L + + + R+ E+ ++ G SR +++ VL A L+ Sbjct: 276 FLTKLLLAFAGIALFVGVFIIANTFTMLVAQRSREIALMRAVGASRRQVVRSVLIEAALV 335 Query: 111 SIFL 114 + Sbjct: 336 GLGA 339 >gi|255953167|ref|XP_002567336.1| Pc21g02720 [Penicillium chrysogenum Wisconsin 54-1255] gi|211589047|emb|CAP95169.1| Pc21g02720 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1054 Score = 36.5 bits (83), Expect = 7.0, Method: Composition-based stats. Identities = 12/79 (15%), Positives = 29/79 (36%) Query: 9 LRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFC 68 + G + I+FI + + + S +S + ++ ++ +P P Sbjct: 353 IARFGALAALVLFVILFIEFCVGLRNSTQSASEKGQSFLNVFILALTVVVIAVPEGLPLA 412 Query: 69 FAMETTNVLTSMNRNTELL 87 + + T M R+ L+ Sbjct: 413 VTLALSFATTRMMRDNNLV 431 >gi|293365067|ref|ZP_06611784.1| cell division protein FtsX [Streptococcus oralis ATCC 35037] gi|291316517|gb|EFE56953.1| cell division protein FtsX [Streptococcus oralis ATCC 35037] Length = 311 Score = 36.5 bits (83), Expect = 7.1, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 44/108 (40%), Gaps = 2/108 (1%) Query: 46 LNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLF 105 L +++ G +I +L + F + T +T ++R+ E+ I+ G + P L Sbjct: 179 LASFIRVWGLVIAGLLIFIAVF--LISNTIRITIISRSREIQIMRLVGAKNGYIRGPFLL 236 Query: 106 LAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRL 153 + + +++ + + Q K+ + S + ++F L Sbjct: 237 EGAFIGLLGAAIPSVLVFFVYNMVYQSVNKSLVGQNLSMITPDVFIPL 284 >gi|328882976|emb|CCA56215.1| putative ABC transporter integral membrane protein [Streptomyces venezuelae ATCC 10712] Length = 857 Score = 36.5 bits (83), Expect = 7.1, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 3/70 (4%) Query: 49 LLKISGYLIPTVLPMVTPFCFAMETTNVLTSM--NRNTELLIIDNTGTSRITLIKPVLFL 106 L + Y + + + N + + R E+ ++ G+SR + + VL Sbjct: 262 FLDVMKYAMLGFAGIAFLVGIFL-IVNTFSMLVAQRTREIGLMRAIGSSRKQVNRSVLIE 320 Query: 107 AILLSIFLFI 116 A+LL F + Sbjct: 321 ALLLGFFGSV 330 >gi|167761004|ref|ZP_02433131.1| hypothetical protein CLOSCI_03402 [Clostridium scindens ATCC 35704] gi|167661383|gb|EDS05513.1| hypothetical protein CLOSCI_03402 [Clostridium scindens ATCC 35704] Length = 479 Score = 36.5 bits (83), Expect = 7.1, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 29/77 (37%), Gaps = 1/77 (1%) Query: 60 VLPMVTPFCFAMETTNVLTSM-NRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 +L +V+ + + L M NR E+ I+ G S+ + L A+L+ F+ Sbjct: 328 LLLLVSSASYIILVLIFLFWMKNRTQEIGILMALGESKKRIWMQFLVEALLVGCIGFVLS 387 Query: 119 NIIEPKCRSTIKQLSAK 135 P A+ Sbjct: 388 MGASPLLSKATASYLAR 404 >gi|307702224|ref|ZP_07639184.1| putative cell-division protein [Streptococcus oralis ATCC 35037] gi|307624237|gb|EFO03214.1| putative cell-division protein [Streptococcus oralis ATCC 35037] Length = 287 Score = 36.5 bits (83), Expect = 7.2, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 44/108 (40%), Gaps = 2/108 (1%) Query: 46 LNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLF 105 L +++ G +I +L + F + T +T ++R+ E+ I+ G + P L Sbjct: 155 LASFIRVWGLVIAGLLIFIAVF--LISNTIRITIISRSREIQIMRLVGAKNGYIRGPFLL 212 Query: 106 LAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRL 153 + + +++ + + Q K+ + S + ++F L Sbjct: 213 EGAFIGLLGAAIPSVLVFFVYNMVYQSVNKSLVGQNLSMITPDVFIPL 260 >gi|302560240|ref|ZP_07312582.1| ABC lipoprotein transporter, permease component [Streptomyces griseoflavus Tu4000] gi|302477858|gb|EFL40951.1| ABC lipoprotein transporter, permease component [Streptomyces griseoflavus Tu4000] Length = 856 Score = 36.5 bits (83), Expect = 7.3, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 3/71 (4%) Query: 49 LLKISGYLIPTVLPMVTPFCFAMETTNVLTSM--NRNTELLIIDNTGTSRITLIKPVLFL 106 + + Y + + + N + + R E+ ++ G+SR + + VL Sbjct: 260 FMNVMKYAMLGFAGIAFLVGIFL-IINTFSMLVAQRTREIGLMRAIGSSRKQVNRSVLVE 318 Query: 107 AILLSIFLFIS 117 A+LL I + Sbjct: 319 ALLLGIIGSVL 329 >gi|212634683|ref|YP_002311208.1| hypothetical protein swp_1859 [Shewanella piezotolerans WP3] gi|212556167|gb|ACJ28621.1| Conserved hypothetical protein [Shewanella piezotolerans WP3] Length = 289 Score = 36.5 bits (83), Expect = 7.5, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 24/68 (35%), Gaps = 4/68 (5%) Query: 245 QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGL----ISIVAADKRALVR 300 + L +L+P ++ + E E + EFH R L P AA R Sbjct: 168 RYLQGMLDPTADHDALQQEFTEVHAREFHLRFRVALAPFYCLAKEDEAGFEAAMLRGSNM 227 Query: 301 QRKKIHPI 308 R + + Sbjct: 228 HRAYVRKL 235 >gi|331266733|ref|YP_004326363.1| cell division ABC transporter, permease protein FtsX [Streptococcus oralis Uo5] gi|326683405|emb|CBZ01023.1| cell division ABC transporter, permease protein FtsX [Streptococcus oralis Uo5] Length = 308 Score = 36.1 bits (82), Expect = 7.9, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 45/108 (41%), Gaps = 2/108 (1%) Query: 46 LNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLF 105 L +++ G +I +L + F + T +T ++R+ E+ I+ G + P L Sbjct: 176 LASFIRVWGLVIAGLLIFIAVF--LISNTIRITIISRSREIQIMRLVGARNGYIRGPFLL 233 Query: 106 LAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRL 153 + +F +++ + + Q K+ + S + ++F L Sbjct: 234 EGAFIGLFGAAIPSVLVFFVYNMVYQSVNKSLVGQNLSMITPDVFIPL 281 >gi|160894881|ref|ZP_02075655.1| hypothetical protein CLOL250_02431 [Clostridium sp. L2-50] gi|156863312|gb|EDO56743.1| hypothetical protein CLOL250_02431 [Clostridium sp. L2-50] Length = 302 Score = 36.1 bits (82), Expect = 8.0, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 39/115 (33%), Gaps = 4/115 (3%) Query: 45 SLNILLKISGYLIPTVLPMVTPFCFA-METTNVLTSMNRNTELLIIDNTGTSRITLIKPV 103 S++ L + GY ++ ++ + T + R E+ I+ G + + P Sbjct: 164 SISTLSSLVGYASIGIVVILMLVSIFLISNTITIGITVRKEEIAIMKLIGATNFFVRAPF 223 Query: 104 LFLAILLSIFLFISENIIEPKCRSTIKQLSA---KAQLALTFSYLEENLFFRLDD 155 + I++ + + I + A ++ +E LF + Sbjct: 224 IIEGIIIGAVGSVIPLYLLYVMYQKILEYVAGRFAVITSVFAFVSKEELFKTMIP 278 >gi|194397096|ref|YP_002037403.1| Cell division protein FtsX [Streptococcus pneumoniae G54] gi|194356763|gb|ACF55211.1| Cell division protein FtsX [Streptococcus pneumoniae G54] Length = 308 Score = 36.1 bits (82), Expect = 8.0, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 46/117 (39%), Gaps = 2/117 (1%) Query: 46 LNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLF 105 L +++ G I +L + F + T +T ++R+ E+ I+ G + P L Sbjct: 176 LASFIRVWGLGIAALLIFIAVF--LISNTIRITIISRSREIQIMRLVGAKNSYIRGPFLL 233 Query: 106 LAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS 162 + + I+ +++ + Q K+ + S + +LF L L I Sbjct: 234 EGAFIGLLGAIAPSVLVFIVYQIVYQSVNKSLVGQNLSMISPDLFSPLMIALXFVIG 290 >gi|311113860|ref|YP_003985082.1| ABC transporter permease [Rothia dentocariosa ATCC 17931] gi|310945354|gb|ADP41648.1| ABC superfamily ATP binding cassette transporter permease protein [Rothia dentocariosa ATCC 17931] Length = 938 Score = 36.1 bits (82), Expect = 8.4, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 37/83 (44%), Gaps = 1/83 (1%) Query: 39 VSSSTESLNILLKISGYLIPTVLPMVTPFCFA-METTNVLTSMNRNTELLIIDNTGTSRI 97 + ++ I L + Y I ++ ++ + T VL++ R+ E ++ G SR Sbjct: 793 ILEMRAAVEISLIVIMYTILAIIALMVLISVLGVSNTLVLSAHERSRENALLRTLGLSRQ 852 Query: 98 TLIKPVLFLAILLSIFLFISENI 120 L ++ AIL+++ + I Sbjct: 853 QLRSVIMIEAILITLSALLVALI 875 >gi|186682491|ref|YP_001865687.1| glycolipid ABC exporter inner membrane subunit [Nostoc punctiforme PCC 73102] gi|186464943|gb|ACC80744.1| ABC exporter, inner membrane subunit, DevC family [Nostoc punctiforme PCC 73102] Length = 386 Score = 36.1 bits (82), Expect = 8.4, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 27/76 (35%), Gaps = 5/76 (6%) Query: 51 KISGYLIPTVLPMVTPFCFAMETTNVLTSMNRN-----TELLIIDNTGTSRITLIKPVLF 105 ++ I + F + T V + + +E + G S L K VL Sbjct: 257 WLTSTSIGIIFGTGAIMAFIVGTVIVYQVLYSDITEHLSEYATLKAIGYSNFRLSKVVLQ 316 Query: 106 LAILLSIFLFISENII 121 A++L+ FI I Sbjct: 317 EAVILAFLGFIPGFFI 332 >gi|269126534|ref|YP_003299904.1| hypothetical protein Tcur_2300 [Thermomonospora curvata DSM 43183] gi|268311492|gb|ACY97866.1| protein of unknown function DUF214 [Thermomonospora curvata DSM 43183] Length = 834 Score = 36.1 bits (82), Expect = 8.5, Method: Composition-based stats. Identities = 10/60 (16%), Positives = 23/60 (38%), Gaps = 5/60 (8%) Query: 59 TVLPMVTPFCFAMETTNVLTSMN-----RNTELLIIDNTGTSRITLIKPVLFLAILLSIF 113 T L + + + + + R EL ++ G SR + + V+ A+ + + Sbjct: 261 TFLLVFALISIFVGAFIIFNTFSMLVAQRTRELALLRAIGASRRQITRAVIGEAVAVGVV 320 >gi|294658111|ref|XP_460432.2| DEHA2F01584p [Debaryomyces hansenii CBS767] gi|202952881|emb|CAG88739.2| DEHA2F01584p [Debaryomyces hansenii] Length = 563 Score = 36.1 bits (82), Expect = 8.6, Method: Composition-based stats. Identities = 21/127 (16%), Positives = 42/127 (33%), Gaps = 25/127 (19%) Query: 151 FRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHR 210 + L I N N L F+ D+ + + A++ + I+N G + R Sbjct: 258 SKRRPGLIIH----NENGELDDDFLYDNSNPEDETNIRAENNRVYSPP---IINGGVILR 310 Query: 211 KS------------------PISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLN 252 K ++ + S +++ + + + + LS L + Sbjct: 311 KELKEKQKLSKEEARSWDVFDEARKCKVDSESSNAVKSIAQKTEEPRARRRRKKLSDLPH 370 Query: 253 PNPNNPN 259 PNPN Sbjct: 371 PNPNPEL 377 >gi|330447180|ref|ZP_08310830.1| permease family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491371|dbj|GAA05327.1| permease family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 310 Score = 36.1 bits (82), Expect = 8.7, Method: Composition-based stats. Identities = 10/94 (10%), Positives = 34/94 (36%), Gaps = 2/94 (2%) Query: 53 SGYLIPTVLPMVTPFCFAMETTNVL--TSMNRNTELLIIDNTGTSRITLIKPVLFLAILL 110 + ++ + F + N L ++ E+ ++ G + +++P L++ + Sbjct: 178 LAITLAMLMSGLMLFAVFLIVGNTLRLQVLSHKDEIQVMKMVGATDSYILRPYLYVGVWY 237 Query: 111 SIFLFISENIIEPKCRSTIKQLSAKAQLALTFSY 144 + + I+ + + AK ++ Sbjct: 238 GLIAAVIAWILTAVVTLLLDEAVAKLANLYGSNF 271 >gi|116178982|ref|XP_001219340.1| hypothetical protein CHGG_00119 [Chaetomium globosum CBS 148.51] gi|88184416|gb|EAQ91884.1| hypothetical protein CHGG_00119 [Chaetomium globosum CBS 148.51] Length = 1236 Score = 36.1 bits (82), Expect = 8.9, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 31/90 (34%), Gaps = 5/90 (5%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRI----NLVSSSTESLNILLKISGYLIPTVLPM 63 +L F ++F+ I+ L ++ + ++ L S ++ +P Sbjct: 398 VLADWIAKFGGGAALLLFVVLFIKFLAQLPNNTDTPDQKGQTFLRLFITSVTVVVVAVPE 457 Query: 64 VTPFCFAMETTNVLTSMNRNTELL-IIDNT 92 P + T M ++ L+ ++ Sbjct: 458 GLPLAVTLALAFATTRMLKDNNLVRVLKAC 487 >gi|257870247|ref|ZP_05649900.1| cell division protein [Enterococcus gallinarum EG2] gi|257804411|gb|EEV33233.1| cell division protein [Enterococcus gallinarum EG2] Length = 294 Score = 36.1 bits (82), Expect = 8.9, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 41/125 (32%), Gaps = 4/125 (3%) Query: 42 STESLNILLKISG----YLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRI 97 +S + + +S + + + ++ F + T +T ++R E+ I+ G Sbjct: 152 GGDSSDKIFALSAAVRTWGLGAAILLIFVAMFLISNTIRITILSRQREIQIMRLVGAKNG 211 Query: 98 TLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL 157 + P + + I I + L A L +S + N F + Sbjct: 212 YIRWPFFLEGGWIGLLGSIVPIAIMYFGYHQVYLLVNPALLRSNYSLIAPNQFLLQVCGV 271 Query: 158 YIKIS 162 I Sbjct: 272 MALIG 276 >gi|239981783|ref|ZP_04704307.1| putative ABC transporter permease protein [Streptomyces albus J1074] gi|291453644|ref|ZP_06593034.1| ABC transporter integral membrane protein [Streptomyces albus J1074] gi|291356593|gb|EFE83495.1| ABC transporter integral membrane protein [Streptomyces albus J1074] Length = 841 Score = 36.1 bits (82), Expect = 9.0, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 29/86 (33%), Gaps = 9/86 (10%) Query: 59 TVLPMVTPFCFAMETTNVLTSM-----NRNTELLIIDNTGTSRITLIKPVL----FLAIL 109 T+L + + + R EL ++ G SR + + VL + ++ Sbjct: 262 TMLLAFAGIALFVGVFLIANTFTMLIAQRTRELALMRAVGASRRQVKRSVLAEAALVGLV 321 Query: 110 LSIFLFISENIIEPKCRSTIKQLSAK 135 S F + RS + A+ Sbjct: 322 ASAVGFGLGLGLAVALRSAMDAFGAE 347 >gi|227543280|ref|ZP_03973329.1| ABC superfamily ATP binding cassette transporter permease protein [Corynebacterium glucuronolyticum ATCC 51866] gi|227180893|gb|EEI61865.1| ABC superfamily ATP binding cassette transporter permease protein [Corynebacterium glucuronolyticum ATCC 51866] Length = 848 Score = 36.1 bits (82), Expect = 9.1, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 33/104 (31%), Gaps = 8/104 (7%) Query: 50 LKISGYLIPTVLPMVTPFCFAMETTNVLTSM--NRNTELLIIDNTGTSRITLIKPVLFLA 107 L Y + + + TN + + R E ++ GTSR + + V+ A Sbjct: 250 LSFVNYFLWAFAGIALVVGTFI-ITNTFSMIVAQRTREFALLRALGTSRRQITRSVIVEA 308 Query: 108 ILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFF 151 I++ + +I A + + L F Sbjct: 309 IIVGLIGSALG-VIAGWGLVQALMAIAAGRG----AVLSPGTFM 347 >gi|297741520|emb|CBI32652.3| unnamed protein product [Vitis vinifera] Length = 930 Score = 36.1 bits (82), Expect = 9.2, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 40/124 (32%), Gaps = 23/124 (18%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + ++ VF+ W +S +L L +S Sbjct: 777 ILFRYL---VIGLYVGIATVGVFVIWYTHSSFLGIDLSGDGHTLATTLSLSVL------- 826 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 A+E N L +++ + LL++ + P L +A+ +S L + Sbjct: 827 ------VAIEMFNSLNALSEDGSLLVM-----PPW--VNPWLLVAMSVSFGLHFLILYVP 873 Query: 123 PKCR 126 + Sbjct: 874 VLAQ 877 >gi|16804544|ref|NP_466029.1| hypothetical protein lmo2506 [Listeria monocytogenes EGD-e] gi|224503254|ref|ZP_03671561.1| hypothetical protein LmonFR_12188 [Listeria monocytogenes FSL R2-561] gi|254828081|ref|ZP_05232768.1| ftsX [Listeria monocytogenes FSL N3-165] gi|254831071|ref|ZP_05235726.1| hypothetical protein Lmon1_06913 [Listeria monocytogenes 10403S] gi|255025540|ref|ZP_05297526.1| hypothetical protein LmonocytFSL_02933 [Listeria monocytogenes FSL J2-003] gi|255028769|ref|ZP_05300720.1| hypothetical protein LmonL_05501 [Listeria monocytogenes LO28] gi|284802944|ref|YP_003414809.1| hypothetical protein LM5578_2701 [Listeria monocytogenes 08-5578] gi|284996085|ref|YP_003417853.1| hypothetical protein LM5923_2650 [Listeria monocytogenes 08-5923] gi|16411994|emb|CAD00584.1| ftsX [Listeria monocytogenes EGD-e] gi|258600465|gb|EEW13790.1| ftsX [Listeria monocytogenes FSL N3-165] gi|284058506|gb|ADB69447.1| hypothetical protein LM5578_2701 [Listeria monocytogenes 08-5578] gi|284061552|gb|ADB72491.1| hypothetical protein LM5923_2650 [Listeria monocytogenes 08-5923] Length = 294 Score = 36.1 bits (82), Expect = 9.2, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 33/102 (32%) Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ F + T + +R E+ I+ G + + P + L + I + Sbjct: 175 IGLLLTAMFLISNTIKIAIFSRRREIEIMKLVGATNWFIRWPFVLEGAWLGLIGSILPVV 234 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS 162 + I L + + S L F L I I Sbjct: 235 LTFIGYVNIYNLVNPKLVTSSLSLLPPTPFAYQISGLIIAIG 276 >gi|83594081|ref|YP_427833.1| hypothetical protein Rru_A2749 [Rhodospirillum rubrum ATCC 11170] gi|83576995|gb|ABC23546.1| Protein of unknown function DUF214 [Rhodospirillum rubrum ATCC 11170] Length = 409 Score = 36.1 bits (82), Expect = 9.3, Method: Composition-based stats. Identities = 13/107 (12%), Positives = 44/107 (41%), Gaps = 10/107 (9%) Query: 11 CIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFA 70 + S L + + +W+ + + ++S ++ ++ +++ +V A Sbjct: 247 EVVASHLGAATGLTATSWIAKNRRLYQALASQAQTGRLIQGF------SLITIVIGVSSA 300 Query: 71 METTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 + +L++ R +E+ I+ + G S+ + L + + + + Sbjct: 301 L----LLSTYRRRSEIGIMRSFGVSKRFVALVFLAQGLFVGLIGALL 343 >gi|239930799|ref|ZP_04687752.1| ABC transport system integral membrane protein [Streptomyces ghanaensis ATCC 14672] gi|291439164|ref|ZP_06578554.1| ABC transport system integral membrane protein [Streptomyces ghanaensis ATCC 14672] gi|291342059|gb|EFE69015.1| ABC transport system integral membrane protein [Streptomyces ghanaensis ATCC 14672] Length = 859 Score = 36.1 bits (82), Expect = 9.3, Method: Composition-based stats. Identities = 12/74 (16%), Positives = 29/74 (39%), Gaps = 3/74 (4%) Query: 46 LNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSM--NRNTELLIIDNTGTSRITLIKPV 103 + + + Y + + + N + + R E+ ++ G+SR + + V Sbjct: 260 VESFMSVMKYAMLGFAGIAFLVGIFL-IINTFSMLVAQRTREIGLMRAIGSSRGQVNRSV 318 Query: 104 LFLAILLSIFLFIS 117 L A+LL + + Sbjct: 319 LIEALLLGVVGSVL 332 >gi|326201718|ref|ZP_08191589.1| protein of unknown function DUF214 [Clostridium papyrosolvens DSM 2782] gi|325988318|gb|EGD49143.1| protein of unknown function DUF214 [Clostridium papyrosolvens DSM 2782] Length = 482 Score = 36.1 bits (82), Expect = 9.4, Method: Composition-based stats. Identities = 17/106 (16%), Positives = 37/106 (34%), Gaps = 9/106 (8%) Query: 24 VFIAWVIQILQRINLVSSST------ESLNILLKISGYLIPTVLPMVTPFCFAMETTNVL 77 + + +R +L+ + + N L KIS LI F + V Sbjct: 293 TAVEKINMDWERYDLIDRNGNMSTVSSNFNDLAKISTLLIVITFVAGLVILFLIFVFWVK 352 Query: 78 TSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 N E+ ++ G ++ ++ + A++++ F P Sbjct: 353 NR---NHEIGVLLALGCKKVNILGQLFVEALIITFLSFAISFACAP 395 >gi|320095991|ref|ZP_08027604.1| cell division protein FtsX [Actinomyces sp. oral taxon 178 str. F0338] gi|319977062|gb|EFW08792.1| cell division protein FtsX [Actinomyces sp. oral taxon 178 str. F0338] Length = 304 Score = 36.1 bits (82), Expect = 9.5, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 23/57 (40%) Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 MV + TT L++M+R E I+ G S + + P + L ++ Sbjct: 189 MVVAAVLLISTTIRLSAMSREQETQIMRYVGASNLFIQAPFMIEGALAALVGAGLAI 245 >gi|171679271|ref|XP_001904582.1| hypothetical protein [Podospora anserina S mat+] gi|170939261|emb|CAP64489.1| unnamed protein product [Podospora anserina S mat+] Length = 1177 Score = 36.1 bits (82), Expect = 9.5, Method: Composition-based stats. Identities = 11/82 (13%), Positives = 28/82 (34%), Gaps = 5/82 (6%) Query: 16 FLMSCLFIVFIAWVIQILQRI----NLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAM 71 F ++F+ I+ L + + ++ L + ++ +P P + Sbjct: 366 FGGGAALLLFVVLFIKFLASLPGSQDTPDQKGQTFLRLFITAVTVVVVAVPEGLPLAVTL 425 Query: 72 ETTNVLTSMNRNTELL-IIDNT 92 T M R+ L+ ++ Sbjct: 426 ALAFATTRMMRDNNLVRVLKAC 447 >gi|116619158|ref|YP_821314.1| hypothetical protein Acid_0013 [Candidatus Solibacter usitatus Ellin6076] gi|116222320|gb|ABJ81029.1| protein of unknown function DUF214 [Candidatus Solibacter usitatus Ellin6076] Length = 809 Score = 36.1 bits (82), Expect = 9.5, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 32/87 (36%), Gaps = 1/87 (1%) Query: 50 LKISGYLIPTVLPMVTPFCFAMETTNVLTS-MNRNTELLIIDNTGTSRITLIKPVLFLAI 108 K + + + ++ A +L R+ E+ I G SR +++ +L ++ Sbjct: 264 FKKTLLTLSAAVALLLFIACANVANMLLARSTARDREMAIRSALGASRWRVVRQLLVESV 323 Query: 109 LLSIFLFISENIIEPKCRSTIKQLSAK 135 LL I + + + L + Sbjct: 324 LLGIGGAVLGCALAYGGIKALVALIPE 350 >gi|332244047|ref|XP_003271182.1| PREDICTED: myosin-VI [Nomascus leucogenys] Length = 1285 Score = 36.1 bits (82), Expect = 9.6, Method: Composition-based stats. Identities = 25/122 (20%), Positives = 43/122 (35%), Gaps = 8/122 (6%) Query: 161 ISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQ----AIILNDGEVHRKSPISK 216 + + Q + + RD + + D A+ NDG + +P Sbjct: 990 ARQREEESQQQAVLEQERRDRELALRIAQSEAELISDEAQADLALRRNDGTRPKMTPEQM 1049 Query: 217 DISIMKFKS--YTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHK 274 + +F S +Q A + T + + L + N + ELL R EFH+ Sbjct: 1050 AKEMSEFLSRGPAVQATKAAAGTKKYDLSKWKYAEL--RDTINTSCDIELLAACREEFHR 1107 Query: 275 RL 276 RL Sbjct: 1108 RL 1109 >gi|114608173|ref|XP_001145254.1| PREDICTED: myosin VI [Pan troglodytes] gi|114608175|ref|XP_001144940.1| PREDICTED: myosin-VI [Pan troglodytes] Length = 1285 Score = 36.1 bits (82), Expect = 9.6, Method: Composition-based stats. Identities = 25/122 (20%), Positives = 43/122 (35%), Gaps = 8/122 (6%) Query: 161 ISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQ----AIILNDGEVHRKSPISK 216 + + Q + + RD + + D A+ NDG + +P Sbjct: 990 ARQREEESQQQAVLEQERRDRELALRIAQSEAELISDEAQADLALRRNDGTRPKMTPEQM 1049 Query: 217 DISIMKFKS--YTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHK 274 + +F S +Q A + T + + L + N + ELL R EFH+ Sbjct: 1050 AKEMSEFLSRGPAVQATKAAAGTKKYDLSKWKYAEL--RDTINTSCDIELLAACREEFHR 1107 Query: 275 RL 276 RL Sbjct: 1108 RL 1109 >gi|114608177|ref|XP_001145412.1| PREDICTED: myosin VI [Pan troglodytes] Length = 1276 Score = 36.1 bits (82), Expect = 9.6, Method: Composition-based stats. Identities = 25/122 (20%), Positives = 43/122 (35%), Gaps = 8/122 (6%) Query: 161 ISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQ----AIILNDGEVHRKSPISK 216 + + Q + + RD + + D A+ NDG + +P Sbjct: 990 ARQREEESQQQAVLEQERRDRELALRIAQSEAELISDEAQADLALRRNDGTRPKMTPEQM 1049 Query: 217 DISIMKFKS--YTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHK 274 + +F S +Q A + T + + L + N + ELL R EFH+ Sbjct: 1050 AKEMSEFLSRGPAVQATKAAAGTKKYDLSKWKYAEL--RDTINTSCDIELLAACREEFHR 1107 Query: 275 RL 276 RL Sbjct: 1108 RL 1109 >gi|302413345|ref|XP_003004505.1| calcium-transporting ATPase [Verticillium albo-atrum VaMs.102] gi|261357081|gb|EEY19509.1| calcium-transporting ATPase [Verticillium albo-atrum VaMs.102] Length = 1307 Score = 36.1 bits (82), Expect = 9.6, Method: Composition-based stats. Identities = 13/84 (15%), Positives = 26/84 (30%), Gaps = 4/84 (4%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRI----NLVSSSTESLNILLKISGYLIPTVLPM 63 IL + I+ IQ L R+ + ++ +L S ++ +P Sbjct: 486 ILAGYIAKLGSAAGLILLGVLTIQFLARLPGNDDSPDEKGQTFLQILITSITIVVVAVPE 545 Query: 64 VTPFCFAMETTNVLTSMNRNTELL 87 P + M + L+ Sbjct: 546 GLPLAVTLSLAYATKRMTKENNLV 569 >gi|323342410|ref|ZP_08082642.1| cell division protein FtsX [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463522|gb|EFY08716.1| cell division protein FtsX [Erysipelothrix rhusiopathiae ATCC 19414] Length = 301 Score = 36.1 bits (82), Expect = 9.8, Method: Composition-based stats. Identities = 11/72 (15%), Positives = 28/72 (38%) Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 V+ + F + T ++ +R E+ I+ G + + P + +++ + I Sbjct: 179 VVTLAVIAVFLISNTIRVSIHSRRREISIMRTVGATNWYIRWPFIIEGMVIGLLGAIIPI 238 Query: 120 IIEPKCRSTIKQ 131 +I + Q Sbjct: 239 VISIFGYQYLYQ 250 >gi|186475542|ref|YP_001857012.1| Ste24 endopeptidase [Burkholderia phymatum STM815] gi|184192001|gb|ACC69966.1| Ste24 endopeptidase [Burkholderia phymatum STM815] Length = 419 Score = 36.1 bits (82), Expect = 9.8, Method: Composition-based stats. Identities = 11/71 (15%), Positives = 26/71 (36%), Gaps = 4/71 (5%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS----TESLNILLKISGYLIPTVL 61 ++++ + +FL+S + + W+ Q + + + L + +P L Sbjct: 287 RHVIKRMIVTFLISLAMLALLGWLTQRTWFFEGLGVRPSMTGSNDGLALVLFFLAVPVFL 346 Query: 62 PMVTPFCFAME 72 VTP Sbjct: 347 FFVTPLGSLAS 357 >gi|254411820|ref|ZP_05025596.1| hypothetical protein MC7420_4786 [Microcoleus chthonoplastes PCC 7420] gi|196181542|gb|EDX76530.1| hypothetical protein MC7420_4786 [Microcoleus chthonoplastes PCC 7420] Length = 817 Score = 36.1 bits (82), Expect = 9.9, Method: Composition-based stats. Identities = 28/188 (14%), Positives = 57/188 (30%), Gaps = 24/188 (12%) Query: 86 LLIIDNTGTSR---ITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTF 142 + I+ +G S L +L ++ S+ I +S Q A+ + F Sbjct: 362 IYIVLASGCSLIGTYLLFLAGWWLPVIPSLLALTGSAFITADYQSRRLQQEAQQKYRRIF 421 Query: 143 SYLEENLFFRLDDDLY---------IKISKYNPNNTLQGI------FIVDSRDTQTHKIY 187 E +F D Y I +P + I VD + Sbjct: 422 ENALEGIFQTTLDGRYRSANPALAKIY-GYKSPEELITSITNIKTQLYVDPKRRDYFIQL 480 Query: 188 YAQSGSIDLDRQAIILNDGEV-----HRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 Q G + + +G + H +S +++ ++ + + + +A Sbjct: 481 MEQQGEVVGFESQVYRRNGSIIWICEHARSVCDDQGNVLYYQGFIEDISERKQAQVEREA 540 Query: 243 NDQNLSFL 250 + L L Sbjct: 541 FTRELFQL 548 >gi|227489027|ref|ZP_03919343.1| ABC superfamily ATP binding cassette transporter permease protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227090972|gb|EEI26284.1| ABC superfamily ATP binding cassette transporter permease protein [Corynebacterium glucuronolyticum ATCC 51867] Length = 850 Score = 35.7 bits (81), Expect = 10.0, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 33/104 (31%), Gaps = 8/104 (7%) Query: 50 LKISGYLIPTVLPMVTPFCFAMETTNVLTSM--NRNTELLIIDNTGTSRITLIKPVLFLA 107 L Y + + + TN + + R E ++ GTSR + + V+ A Sbjct: 252 LSFVNYFLWAFAGIALVVGTFI-ITNTFSMIVAQRTREFALLRALGTSRRQITRSVIVEA 310 Query: 108 ILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFF 151 I++ + +I A + + L F Sbjct: 311 IIVGLIGSALG-VIAGWGLVQALMAIAAGRG----AVLSPGTFM 349 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.316 0.144 0.373 Lambda K H 0.267 0.0440 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,178,027,495 Number of Sequences: 14124377 Number of extensions: 235800084 Number of successful extensions: 1444259 Number of sequences better than 10.0: 5006 Number of HSP's better than 10.0 without gapping: 3431 Number of HSP's successfully gapped in prelim test: 2632 Number of HSP's that attempted gapping in prelim test: 1433856 Number of HSP's gapped (non-prelim): 7875 length of query: 361 length of database: 4,842,793,630 effective HSP length: 140 effective length of query: 221 effective length of database: 2,865,380,850 effective search space: 633249167850 effective search space used: 633249167850 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.0 bits) S2: 82 (36.1 bits)