BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|255764468|ref|YP_003064806.2| permease protein [Candidatus Liberibacter asiaticus str. psy62] (361 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done >gi|288962055|ref|YP_003452365.1| predicted permease [Azospirillum sp. B510] gi|288914335|dbj|BAI75821.1| predicted permease [Azospirillum sp. B510] Length = 385 Score = 177 bits (447), Expect = 3e-42, Method: Composition-based stats. Identities = 60/363 (16%), Positives = 138/363 (38%), Gaps = 7/363 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+ R + + L S + W+ Q L+ I +V S+ + + L + +PT Sbjct: 1 MNRLQRYLFRNLLIATLYSTAGLTLTIWLSQSLRLIEIVVSAGAPMGMFLWLLLLTVPTF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L +V P M ++EL+++ G +L P L LA+ + + + Sbjct: 61 LGVVLPLALVGAILFTYNKMTTDSELVVMRAAGVGPFSLSTPALVLAVAVMAIVLVLNVW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + ++ + + +L E +F + D + + + + L + I D R Sbjct: 121 ITPAAHRELVRMEYAVRSDYSQLFLREGVFNEVGDRFSVFLRDRDSDGNLHKVLIHDGRQ 180 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE--SANSS 236 + D ++ DG + +S + F+ Y + + + ++ Sbjct: 181 PDKPVTIMGDRALMQTGADGTRFVVYDGNRQELDRKTNRLSQLFFERYAVDLKAVAPQAA 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 A +++ L++ N P + +E H R + L + F L+++ A Sbjct: 241 DRWPDARERSTEDLMSG--NVPAQDDRMRRGLIAELHHRFSSPLLALTFALVALSALLSG 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R+ + + I++ + G+ G + + ++P++Y L ++ + Sbjct: 299 EFNRRG-QSSRVTIAVLLVMGLQAGALGLTSLAGKATVFVPLMYAMPVVALLPALWVMSR 357 Query: 357 KYT 359 + Sbjct: 358 GLS 360 >gi|170746990|ref|YP_001753250.1| permease YjgP/YjgQ family protein [Methylobacterium radiotolerans JCM 2831] gi|170653512|gb|ACB22567.1| permease YjgP/YjgQ family protein [Methylobacterium radiotolerans JCM 2831] Length = 386 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 80/358 (22%), Positives = 169/358 (47%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ E YI R + L + + W+ Q L+ ++LV++ ++L + L ++G +PT+ Sbjct: 1 MRQIERYIFRIALGATLACLIGLTGTIWLTQALRELDLVTAKGQTLLVFLFVTGLSLPTL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + T L +N ++EL+++ G +L++P L LA+ +S + + Sbjct: 61 VVVIAPVALFIGTIYALNKLNGDSELIVMSAAGMPPRSLLRPFLTLALFVSFLVGFLVVV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P ++ + + + + ++E F +LD+ + + P TL+G+FI D R+ Sbjct: 121 VMPASFQELRDVITRVRGDFIANVVKEGQFTQLDNGITFHFRERGPGGTLKGLFIQDRRE 180 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT--ESANSS 236 K+Y A+ G+ + +IL +G VH++ S+D SI+ F+ YT+ + S Sbjct: 181 AGKTKVYLAERGNAVDVDGQSYLILENGSVHQQQRESRDSSILTFERYTIDLAAFAPPDS 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + K +++ + LL P+ Y+ + +R+E H RL+ L+P+ I+ A Sbjct: 241 DTIYKPRERSTAQLLFPDTTEGYYKLQ-KGRFRAELHDRLSACLYPLALVFIAFAALGDP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RQ + + ++ + G + ++P + +Y + L+I Sbjct: 300 RTTRQGRGVAIAG-AIVAVVALRIGGFAAVSAAARSPAAVLAVYSVPLVAILLSSLLI 356 >gi|118590094|ref|ZP_01547497.1| permease YjgP/YjgQ [Stappia aggregata IAM 12614] gi|118437066|gb|EAV43704.1| permease YjgP/YjgQ [Stappia aggregata IAM 12614] Length = 395 Score = 172 bits (436), Expect = 6e-41, Method: Composition-based stats. Identities = 81/360 (22%), Positives = 174/360 (48%), Gaps = 6/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ E YI+R +F ++ + + W Q L++++LV+S +++ + I+ +P + Sbjct: 1 MKTIERYIIRRTVYAFTLTIAAMTGVVWATQALRQLDLVTSKGQTIVQFIGITMLALPFL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V PF + VL S++ ++EL++ID +G SR ++KPV+ ++++ + Sbjct: 61 IVIVAPFALMIALILVLNSLSGDSELIVIDASGGSRFLVLKPVMLFSLVVMLLTASMSLY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + ++ + + L + ++ F ++D L I + TL G+ + D+RD Sbjct: 121 VAPAGLAQLRTEITRVRADLVANIVKPGRFITVEDGLTFHIRNRSGKGTLDGLLMHDTRD 180 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 +T Y A +G I DR +++ +G + R+ DISI++F+SY + + Sbjct: 181 PETAFTYQADTGQIVEAADRTLLVMQNGTIQRRPKQQGDISIVRFQSYAFDLSNLIPEAG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V KA++++ L++P ++ Y + + E H+R +Q L+ + FGLI K Sbjct: 241 EPVYKASERSTLNLMSPGRHD-EYALKNPDKLVQELHERFSQPLYCLAFGLIVFAFLGKA 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 RQ + + ++ + + + + +LY+ + + L+ I + Sbjct: 300 RTTRQGRGFAVLG-AICSCVLLRTTGFGVTAISGTSTVLLSLLYVVPITGAVLALISIFR 358 >gi|209964866|ref|YP_002297781.1| predicted permease YjgP [Rhodospirillum centenum SW] gi|209958332|gb|ACI98968.1| predicted permease YjgP [Rhodospirillum centenum SW] Length = 372 Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 62/360 (17%), Positives = 140/360 (38%), Gaps = 7/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+LR + + + + W+ Q L+ + +V SL I +++ PT Sbjct: 1 MNQIDRYLLRNLAVATVFVTAGLSAAIWLTQSLRLVEMVVEGGASLGIFFRLALLTFPTF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + ++EL+++ G S + L +P L LA ++++ + Sbjct: 61 LSLILPVGLLAAVLFTYNRLIMDSELVVMRAAGLSPMALARPALILAAVVALLCYTLTLF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + + +L + ++ L E F + L + + + L G+ I D R Sbjct: 121 AGPAAQRELVRLRQAVRSDVSAVLLREGTFNDVGTGLTVYVRERGREGALSGLLIHDLRS 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 A+ G + D +++ +G + ++F YT+ ++ Sbjct: 181 PGVATTVVAERGRLVEVDDVPHVVVFNGTQIKFHQDDGRTEWLEFARYTVDLQALRKELG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 ++ +++L L+N + + R+E H RL L P+ F + + A Sbjct: 241 PRWIEPRERSLRDLVNLT--DDPLDRQFFGRLRAELHSRLATPLLPLAFTAVGLAALLPG 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R+ + ++ + + I + + +NP P+LY + ++ L + + Sbjct: 299 EFSRRGQGRRIALAAVG-ALVLQSAVLGISNLVGKNPALTPLLYGAVLLPAAAALWYMVR 357 >gi|298291096|ref|YP_003693035.1| permease YjgP/YjgQ family protein [Starkeya novella DSM 506] gi|296927607|gb|ADH88416.1| permease YjgP/YjgQ family protein [Starkeya novella DSM 506] Length = 385 Score = 170 bits (430), Expect = 3e-40, Method: Composition-based stats. Identities = 76/362 (20%), Positives = 164/362 (45%), Gaps = 6/362 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+ R +FL + L + + W+ Q L+ ++++++ +++ + I+ +P + Sbjct: 1 MNRLDRYVFRSAASAFLGTLLVLTLMIWITQALRELDIMTTQGQTILAFVFITSLALPAL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P M L MN ++E+++ G S ++P++ LA++++ + Sbjct: 61 ILGLAPAALFMAVAYTLFRMNSDSEIVVSSAAGISTWRFLRPLVILALIVAACCSVLSLE 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + ++ + + + F L D + + + N N L GIFI D+RD Sbjct: 121 LVPAAMRQFRYEISRVRADVVAFIAQPGRFTTLADGMVFHVRERNANGVLGGIFINDARD 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--S 236 + Y A+ G + + D +IL +G +HR++P D ++++F+ Y S Sbjct: 181 PKQTNTYLAERGQVVDNKDGTFLILEEGAIHRRTPGKPDSNVVEFQRYAFDLSPFTSNGE 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V +A +++ LLNP+P + Y + E H+RL+ L+ + F I+ A + Sbjct: 241 NAVYRAPERSFRELLNPDPKDYVY-ILESGRFTEELHRRLSLPLYVLAFFGIACAALAEP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R+ + + + + + +I++I NP IP +YL L + Sbjct: 300 RTTREGRGLA-LAATTPFVIVLQVTSFGLINQIRGNPSVIPFVYLVPAVFIVGSALSLSG 358 Query: 357 KY 358 ++ Sbjct: 359 RF 360 >gi|222148153|ref|YP_002549110.1| hypothetical protein Avi_1543 [Agrobacterium vitis S4] gi|221735141|gb|ACM36104.1| conserved hypothetical protein [Agrobacterium vitis S4] Length = 399 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 121/359 (33%), Positives = 210/359 (58%), Gaps = 5/359 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YILR + + FL + L ++ I W Q+L RINLV+ + +S+ ++ ++PT+ Sbjct: 6 MKLLESYILRRVAQMFLTALLPVLAIIWTTQVLARINLVTDTGQSIGSFATLATLILPTI 65 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T LT+MN ++EL +ID G SR +++P+L A+ +S+ + N Sbjct: 66 IPIVMPFALVIGITQSLTAMNNDSELAVIDAAGASRAVILRPILLFALAISVITLVITNE 125 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 ++PK + +Q+ A A L + +EE F +++D LY++IS+ L+G+F+ D RD Sbjct: 126 VQPKVKVAARQMIANAYADLLSTVIEEKTFRKVEDGLYVQISQRLAGRVLKGLFVADYRD 185 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS--TI 238 IYYA+ G++D A+I++DGEV RK+P +SI++F SY + Sbjct: 186 PAYSLIYYAREGAVDETGTALIMHDGEVQRKAPGGT-VSIVRFDSYAFDLSDLTETRGKA 244 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 ++ +D++LSFLLNP+ N+ +Y+ + YR+E HKR+T+WL P F LIS+ A Sbjct: 245 KMRPSDRSLSFLLNPDTNDDDYK-DHPGEYRAELHKRMTEWLLPFAFALISLAIAGDAR- 302 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++HP+ +L+++ + W Y +K E N +I ++Y ++I LM+ ++ Sbjct: 303 SHREARLHPMVSALTLALVLRWLTFYAANKSESNAAFIVLMYATPLASAAIATLMLMRQ 361 >gi|255764468|ref|YP_003064806.2| permease protein [Candidatus Liberibacter asiaticus str. psy62] gi|254547819|gb|ACT56866.2| permease protein [Candidatus Liberibacter asiaticus str. psy62] Length = 361 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 361/361 (100%), Positives = 361/361 (100%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV Sbjct: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI Sbjct: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD Sbjct: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL Sbjct: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR Sbjct: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK Sbjct: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 Query: 361 I 361 I Sbjct: 361 I 361 >gi|150395989|ref|YP_001326456.1| permease YjgP/YjgQ family protein [Sinorhizobium medicae WSM419] gi|150027504|gb|ABR59621.1| permease YjgP/YjgQ family protein [Sinorhizobium medicae WSM419] Length = 390 Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats. Identities = 117/353 (33%), Positives = 207/353 (58%), Gaps = 5/353 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI R FL + L ++ I W Q L +NLV+ S +S+ LK++ ++P+V Sbjct: 1 MKLIERYIFRRATIMFLATLLPLMGIVWTTQALANVNLVTDSGQSIIAFLKLATLILPSV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P++ PF + T L++MN ++EL ++ G+SR+++I+PV+FLA LS+ F +N Sbjct: 61 VPIILPFALVIGVTQTLSAMNTDSELTVLSAAGSSRMSIIRPVMFLAAGLSVLSFTIDNF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R +++++ A A L S ++EN F ++ D LY+++ L GIF+ D+RD Sbjct: 121 VEPYSRVSVRKMIATAHADLLASVVQENAFRKITDGLYVQVGARRSGGVLHGIFVADARD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST--I 238 +YYA+ G++D R A+++ DGEVHRK P D+SI+KF SY T Sbjct: 181 PNFELVYYAREGAVDEGRSALVMKDGEVHRKLPDG-DVSIIKFDSYAFDLTDLTRMTGEA 239 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 ++A D++L +LL+P+P++ Y+ + +E H+R T+W FP++FGLI++VA+ Sbjct: 240 NIRAKDRDLFYLLDPDPDDEAYK-RAPRAFAAELHRRFTEWTFPLLFGLIALVASSDAR- 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + ++HP+ +L + + W Y + E + +++P++YL ++ + Sbjct: 298 SHREARVHPMVSALGAALVIRWMTFYAANSAEDSVWFVPLMYLIPLATGALAI 350 >gi|307946743|ref|ZP_07662078.1| permease YjgP/YjgQ family protein [Roseibium sp. TrichSKD4] gi|307770407|gb|EFO29633.1| permease YjgP/YjgQ family protein [Roseibium sp. TrichSKD4] Length = 395 Score = 165 bits (418), Expect = 7e-39, Method: Composition-based stats. Identities = 86/359 (23%), Positives = 169/359 (47%), Gaps = 6/359 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ E YI + F M+ + + W Q L++++LV+S +++ + I+ +P + Sbjct: 1 MKTLERYIFKRAIGVFFMAMAAMAGVVWSTQALRQLDLVTSKGQTIVQFIGITMLALPFL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L +V PF + VL +++ ++EL++ID TG SR ++KPVL ++ Sbjct: 61 LVIVAPFALMIALVLVLNALSGDSELIVIDATGGSRFLVLKPVLIFTAAVTALTATLSIY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +++ + + L + ++ F +D L I + N TL G+ + D RD Sbjct: 121 VAPLGLGELREEITRVRADLVANIVKPGHFINMDAGLTFHIRNRSGNGTLDGLLLHDVRD 180 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 T Y + +G I DR +++ +G + RK + +ISI++F+SY + +S Sbjct: 181 KDTAFTYQSDTGHIVEVADRTLLVMQNGTIQRKPKGAGEISIVRFQSYAFDLSNLIPEAS 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V KA++++ LLNP PN+ Y + + +E H+R +Q L+ + F L+ K Sbjct: 241 EPVYKASERSTMNLLNPPPNDA-YALQHPDKLLAELHERFSQPLYCLAFALVVFAFLGKA 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 RQ + I + +++ + + + +LY+ ++ + I Sbjct: 300 RTTRQGRGIAILG-AITTCILLRTAGFGVTAIASGFTGLLLLLYVVPIAAMAVSVWSIM 357 >gi|227821476|ref|YP_002825446.1| putative permease protein [Sinorhizobium fredii NGR234] gi|227340475|gb|ACP24693.1| putative permease protein [Sinorhizobium fredii NGR234] Length = 390 Score = 165 bits (418), Expect = 8e-39, Method: Composition-based stats. Identities = 112/353 (31%), Positives = 211/353 (59%), Gaps = 5/353 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI R FL + L ++ I W Q L +NLV+ S +S+ LK++ ++P+V Sbjct: 1 MKLIERYIFRRATIMFLATLLPLLGIVWTTQALSNVNLVTDSGQSIFAFLKLATLILPSV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P++ PF + T L+ MN ++EL +++ G+SR+++I+PV++LA+ LS+ F+ +N Sbjct: 61 VPIILPFALLIGVTQTLSVMNTDSELTVLNAAGSSRMSVIRPVIYLAVGLSVLSFVIDNF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R ++++ A A L S ++EN F R+ D LY++++ L GIF+ DSR+ Sbjct: 121 VEPYSRVAVRKMIATAHADLLSSVVQENAFRRITDGLYVQVAARRSGGVLHGIFVADSRN 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE--SANSSTI 238 +YYA+ G++D +R A+++ DGEVHRK P +S++KF SY + + Sbjct: 181 PNFELVYYAREGAVDEERSALVMKDGEVHRKLPDGG-VSVIKFDSYAFDLTDMTRTAGEA 239 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 ++A D++L +L++P+PN+P+Y+ + +E H+RL++W +P++FGLI++V + Sbjct: 240 TIRAKDRDLFYLIDPDPNDPSYK-RSPLAFTAELHRRLSEWTYPLLFGLIALVVSSDAR- 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + ++HP ++ + + W Y + E + +++P++YL ++ + Sbjct: 298 SHREARVHPTISAVGAALVIRWMTFYAGNSAEDSIWFVPLMYLVPLMTGALAI 350 >gi|162149095|ref|YP_001603556.1| permease [Gluconacetobacter diazotrophicus PAl 5] gi|209545162|ref|YP_002277391.1| permease YjgP/YjgQ family protein [Gluconacetobacter diazotrophicus PAl 5] gi|161787672|emb|CAP57268.1| putative permease [Gluconacetobacter diazotrophicus PAl 5] gi|209532839|gb|ACI52776.1| permease YjgP/YjgQ family protein [Gluconacetobacter diazotrophicus PAl 5] Length = 398 Score = 165 bits (417), Expect = 8e-39, Method: Composition-based stats. Identities = 68/354 (19%), Positives = 142/354 (40%), Gaps = 6/354 (1%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + Y+LR + + L + + + W+ Q L ++LV SL + + ++ L+P+ + + Sbjct: 21 LDRYVLRQLLVALLATTGGLSALIWLTQSLHFVSLVVERGLSLRVFIGLTSLLVPSFVAV 80 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 + P + V + + EL ++ G S + + L A + + I I P Sbjct: 81 ILPITTFIVVQFVYQRLAGDRELTVMRAAGLSPFFIARAGLLCATISVVSCMILNIWIVP 140 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 KQ + + + L+E +F + + + + + + TL GI + D R Sbjct: 141 LSFHAFKQYEFQIRNRMAAFMLQEGVFTPVSPTMTVYVRSRDRDGTLHGIVVEDDRQPDN 200 Query: 184 HKIYYAQSGS--IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN-SSTIVL 240 AQ G+ + ++ ++L DG S ++++ F T+ S+ Sbjct: 201 PSTVLAQRGTMLVVDNQPRVVLYDGSRQEIDRKSGRLNVLTFSRNTIDLTSSRGDQARFR 260 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 A + +L LL+P+P P + E +RLT F ++ +VA + A R Sbjct: 261 DATEMSLHELLHPDPQE--VAPRDRGKFAVEAWRRLTAPFTAFSFAMVGLVAVLRGAFSR 318 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 I P +++ + + + +N IP++++ LM+ Sbjct: 319 HGNIIRPA-VAILSVVSLLALSLMVQNLASRNTSLIPLMWVEAILPGIACALML 371 >gi|163853056|ref|YP_001641099.1| permease YjgP/YjgQ family protein [Methylobacterium extorquens PA1] gi|218531866|ref|YP_002422682.1| permease YjgP/YjgQ family protein [Methylobacterium chloromethanicum CM4] gi|254562993|ref|YP_003070088.1| permease [Methylobacterium extorquens DM4] gi|163664661|gb|ABY32028.1| permease YjgP/YjgQ family protein [Methylobacterium extorquens PA1] gi|218524169|gb|ACK84754.1| permease YjgP/YjgQ family protein [Methylobacterium chloromethanicum CM4] gi|254270271|emb|CAX26267.1| putative permease [Methylobacterium extorquens DM4] Length = 389 Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 77/358 (21%), Positives = 159/358 (44%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E YI R +FL + + WV Q L+ ++LV++ ++L + L I+ +PT+ Sbjct: 1 MTQIERYIFRIALGAFLTCLIGLTGTIWVTQALRELDLVTAKGQTLLVFLFITALSLPTL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + L +N ++EL+++ G L++P LA +S+ + Sbjct: 61 ITVIAPVALFIACVYALNKLNGDSELIVMSAAGMPPRQLLRPFATLAFAISVVVAFLTIQ 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P ++ + + + + ++E F LD+ + + + +LQG+FI D R+ Sbjct: 121 VMPSSFQELRDVLTRVRGDFVANVVKEGQFTALDNGITFHFRERGADGSLQGLFIQDKRE 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT--ESANSS 236 +Y A+ G + + ++L G +HR+ S+D SI+ ++ Y + + S Sbjct: 181 AGKAVVYLAERGRVSEVDGQTYLVLEKGSIHRQQKDSRDSSIVSYERYAVDLAAFTPPDS 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V K +++ LL P+ YR + +R+E H RL+ WL+P+ I+ A Sbjct: 241 ETVYKPRERSTMALLFPDTGEGYYRLQ-KGRFRAELHDRLSAWLYPLALAFIAFAALGDP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RQ + + + + + ++P + +Y ++ L+I Sbjct: 300 RTTRQGRGLAVAGAVVGV-IALRIAGFAASSAAVRSPGAVVAIYAAPLGAIALSCLLI 356 >gi|188583150|ref|YP_001926595.1| permease YjgP/YjgQ family protein [Methylobacterium populi BJ001] gi|179346648|gb|ACB82060.1| permease YjgP/YjgQ family protein [Methylobacterium populi BJ001] Length = 389 Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 76/378 (20%), Positives = 165/378 (43%), Gaps = 19/378 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E YI R +FL + + WV Q L+ ++LV++ ++L + L I+ +PT+ Sbjct: 1 MTQIERYIFRIALGAFLTCLIGLTGTIWVTQALRELDLVTAKGQTLLVFLFITALSLPTL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + L +N ++EL+++ G L++P + LA+ +S+ + Sbjct: 61 ITVIAPVALFIACVYALNKLNGDSELIVMSAAGMPPRQLLRPFVTLALAVSVVVAFLTIQ 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P ++ + + + + ++E F LD+ + + + +LQG+FI D R+ Sbjct: 121 VMPSSFQELRDVLTRVRGDFVANVVKEGQFTALDNGITFHFRERGADGSLQGLFIQDKRE 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT--ESANSS 236 +Y A+ G + + ++L G +HR+ S+D SI+ ++ Y + + + Sbjct: 181 AGKAVVYLAERGRVSEVDGQTYLVLEKGSIHRQQKDSRDSSIVSYERYAVDLAAFTPPDA 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V K +++ LL P+ YR + +R+E H RL+ WL+P+ I+ A Sbjct: 241 ETVYKPRERSTLALLFPDTGEGYYRLQ-KGRFRAELHDRLSAWLYPLALAFIAFAALGDP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK- 355 RQ + + L + + ++P + +Y ++ +I Sbjct: 300 RTTRQGRGLAVAGAVLGVV-ALRIAGFAASSAAVRSPGAVAAVYAAPLGAIALSCFIIFG 358 Query: 356 ------------KKYTKI 361 +++ ++ Sbjct: 359 GARVRAMNERLGRQWRRL 376 >gi|15964907|ref|NP_385260.1| hypothetical protein SMc00584 [Sinorhizobium meliloti 1021] gi|307300977|ref|ZP_07580746.1| permease YjgP/YjgQ family protein [Sinorhizobium meliloti BL225C] gi|307317712|ref|ZP_07597150.1| permease YjgP/YjgQ family protein [Sinorhizobium meliloti AK83] gi|15074086|emb|CAC45733.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021] gi|306896474|gb|EFN27222.1| permease YjgP/YjgQ family protein [Sinorhizobium meliloti AK83] gi|306903932|gb|EFN34518.1| permease YjgP/YjgQ family protein [Sinorhizobium meliloti BL225C] Length = 390 Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 117/353 (33%), Positives = 208/353 (58%), Gaps = 5/353 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI R FL + L ++ I W Q L +NLV+ S +S+ LK++ ++P+V Sbjct: 1 MKLIERYIFRRATIMFLATLLPLMGIVWTTQALTNVNLVTDSGQSIIAFLKLATLILPSV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P++ PF + T L++MN ++EL ++ G+SR+++I+PV+FLA LS+ F +N Sbjct: 61 VPIILPFALVIGVTQTLSAMNTDSELTVLSAAGSSRMSIIRPVMFLAAGLSVLSFAIDNF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R ++++ A A L S ++EN F ++ D LY+++ LQGIF+ D+RD Sbjct: 121 VEPYSRVAVRKMIATAHADLLASVVQENAFRKITDGLYVQVGARRSGGVLQGIFVADARD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN--SSTI 238 +YYA+ G++D +R A+++ DGEVHRK P D+SI+KF SY + Sbjct: 181 PNFELVYYAREGAVDEERSALVMKDGEVHRKLPDG-DVSIIKFDSYAFDLTDLTRMAGEA 239 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 ++A D++L +LL+P+P++ Y+ L + +E H+R T+W FP++FGLI++V + Sbjct: 240 NIRAKDRDLFYLLDPDPDDEAYKRAPL-AFTAELHRRFTEWTFPLLFGLIALVVSSDAR- 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + ++HP+ +L + + W Y + E + +++P++YL ++ + Sbjct: 298 SHREARVHPMVSALGAALVIRWMTFYAANSAEDSVWFVPLMYLVPLVTGALAI 350 >gi|328544011|ref|YP_004304120.1| permease YjgP/YjgQ [polymorphum gilvum SL003B-26A1] gi|326413755|gb|ADZ70818.1| Permease YjgP/YjgQ [Polymorphum gilvum SL003B-26A1] Length = 395 Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 88/358 (24%), Positives = 171/358 (47%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ E YI+R G +F+M+ + + W Q L++++LV+S +++ + I+ +P + Sbjct: 1 MKTLERYIVRRAGIAFVMTLAAMTGVVWATQALRQLDLVTSKGQTIVQFVGITMLAMPFL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V PF + VL +++ ++EL++I+ +G SR +++PV+ + + + Sbjct: 61 VLVVAPFALMIALILVLNALSSDSELIVINASGGSRFLVLRPVVLFSAAIMLLSATLSLY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + ++ A+ ++ L + + F ++D L I + +L G+ + D RD Sbjct: 121 VAPLGLAQLRDEIARVRVDLVANIVRPGRFITVEDGLTFHIRNRRGDGSLDGLLLHDRRD 180 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 QT Y A G I DR +++ DG + R+ DISI++F+SY + +S Sbjct: 181 PQTVFTYQADVGRIVEAADRTLLLMQDGTIQRRPKTDGDISIVRFQSYAFDLSALIPETS 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 T + KA+++ LL + +Y + + R+E H RL+Q L+P+ FGLI + Sbjct: 241 TPIYKASERPTLALLLGT-HQDDYARQNADRLRAELHDRLSQPLYPLAFGLIVFAFLGQA 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RQ + + + +L G+ + I YL + L I Sbjct: 300 RTTRQGRGMAMLG-ALVACIGLRTAGFGVSTLISGQASLTLGYYLVPLIGIGVALWTI 356 >gi|260427478|ref|ZP_05781457.1| permease YjgP/YjgQ [Citreicella sp. SE45] gi|260421970|gb|EEX15221.1| permease YjgP/YjgQ [Citreicella sp. SE45] Length = 379 Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 67/360 (18%), Positives = 132/360 (36%), Gaps = 5/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ F+ Y+L + F L +V + W+ + + + + ++ + I L+ + +P V Sbjct: 1 MQRFDRYMLSQLMVVFGFFALVLVMVYWLNRSVGLFDELIANGHTAGIFLEFTLLALPGV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V P V M+ +EL ++ TG S L +PVL ++ + I ++ Sbjct: 61 VAIVLPMAAFGAAVYVTNRMSNESELTVLQATGLSPWRLARPVLVFGAIIGAMMAILSHV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +++ ++ +++ L E F + I P L+ +F+ D RD Sbjct: 121 LVPASIGQLRERESEISGSVSARLLHEGTFLHPTRGVTFYIRDITPEGELRDVFLSDRRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIIL--NDGEVHRKSPISKDISIMKFKSYTLQTESANSS-- 236 Y AQS + D L G + +S F++ T + Sbjct: 181 PDRAIAYTAQSAYVLRDDDGPKLTMRSGLAQTLRAEDQTLSTTDFENLTYDISGLVTQNG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 +A + LL + + E H R Q L V+ LI A Sbjct: 241 PPRRRARQISTWELLTDTEAVSEEVKDSVGEVLEEAHMRFEQPLLCVVAALIGYAALMTG 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R + + F + S + + N P++YL I +++++ Sbjct: 301 GFSRFGVTKQIVGAIFLLVF-IKIVESMVTTPVHANAALWPLIYLPSIVGLIIAGVLLQR 359 >gi|296532233|ref|ZP_06894980.1| permease YjgP/YjgQ [Roseomonas cervicalis ATCC 49957] gi|296267440|gb|EFH13318.1| permease YjgP/YjgQ [Roseomonas cervicalis ATCC 49957] Length = 381 Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 77/373 (20%), Positives = 159/373 (42%), Gaps = 14/373 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+ R +G L + + + W+ Q L+ I LV SL + ++++G L+P+ Sbjct: 1 MTRLDRYLFRQLGIGLLAVTIGLAALVWLTQSLRFIELVLDRGLSLAVFVELTGLLLPSF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + T +N + EL+++ G S L +P L +A L + F + Sbjct: 61 FAVILPITTFVVTLFSYVRLNGDRELVVMRAAGLSDWQLSRPALLIATLATGFCLFLQLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + + + L+E +F L DDL + + + TL+GI + D R+ Sbjct: 121 LVPVSHAAFRSWQFEIRNEMAAILLQEGVFSSLGDDLTVYARRREADGTLRGILVHDMRE 180 Query: 181 TQTHKIYYAQSGSIDLD--RQAIILNDGEVHRKSPIS----KDISIMKFKSYTLQTESAN 234 T AQ G + +IL +G+ + P + +S++ F ++ S++ Sbjct: 181 PGTPVTIMAQEGRLVSTPAGPRVILLNGQREQLEPATATHPARLSVLSFAENSVDLASSS 240 Query: 235 SST----IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 S + ++ + LLNP+P N + +R+E H+RL + ++ + Sbjct: 241 RSPVDVARNRDSRERFVPELLNPDPAE-NLPERDIRKFRAEGHQRLASPFTALSMAMVGL 299 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 A R+ P I +++ + I + ++ YIP+++L Sbjct: 300 AVALASGF-RRHGDWRPAAIGVALVVALLALGLAIGNLAARDNRYIPLIWLHTLGPVLGA 358 Query: 351 LLMIKKK--YTKI 361 ++ + + KI Sbjct: 359 AWVLSGRPGWPKI 371 >gi|153009928|ref|YP_001371143.1| permease YjgP/YjgQ family protein [Ochrobactrum anthropi ATCC 49188] gi|151561816|gb|ABS15314.1| permease YjgP/YjgQ family protein [Ochrobactrum anthropi ATCC 49188] Length = 402 Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 113/356 (31%), Positives = 202/356 (56%), Gaps = 6/356 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYILR + FL V I W +Q+LQRI+ +++S ++ +++ S LIP+ Sbjct: 1 MRLIELYILRRVAIMFLAVLGAAVGITWTVQVLQRIDFLTTSGQTFQTIIQFSSLLIPSA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T L++MN+++EL++I+ +G R +++P+L LA ++S+ F+ N Sbjct: 61 IPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAAVISVVSFLVANY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 ++P R ++ + A A L ++E F +L D+LYI++++ + ++ G+FI DSRD Sbjct: 121 VDPYARMNMRAMIANASADLMNVIVQEGNFRKLADNLYIQVAERRADGSIGGLFIADSRD 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--S 236 IYYA G+I +++ +GEV R+ +SI+KF SY S Sbjct: 181 PSLDLIYYAADGAIASTPTGDMLLMQNGEVQRRDVSDGTVSIIKFNSYAFDLSQFASAGD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V+ A D+ LS+LLNP+PN+P + L Y++E H+RLTQWL+PV+F +I++ A Sbjct: 241 DFVIYAKDRPLSYLLNPDPNDPILQTRPL-RYKAELHRRLTQWLYPVVFAMIALAFAGDS 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 + ++ F ++S + V+W + + +++ YI ++YL + + Sbjct: 300 R-SHREARVSASFSAISTALLVYWAGYFASDRADKDAGYIVVMYLVPAAVILVTGF 354 >gi|240140389|ref|YP_002964868.1| putative permease [Methylobacterium extorquens AM1] gi|240010365|gb|ACS41591.1| putative permease [Methylobacterium extorquens AM1] Length = 389 Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats. Identities = 78/358 (21%), Positives = 159/358 (44%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E YI R +FL + + WV Q L+ ++LV++ ++L + L I+ +PT+ Sbjct: 1 MTQIERYIFRIALGAFLTCLIGLTGTIWVTQALRELDLVTAKGQTLLVFLFITALSLPTL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + L +N ++EL+++ G L++P LA +S+ + Sbjct: 61 ITVIAPVALFIACVYALNKLNGDSELIVMSAAGMPPRQLLRPFATLAFAISVVVAFLTIQ 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P ++ + + + + L+E F LD+ + + + +LQG+FI D R+ Sbjct: 121 VMPSSFQELRDVLTRVRGDFVANVLKEGQFTALDNGITFHFRERGADGSLQGLFIQDKRE 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT--ESANSS 236 +Y A+ G + + ++L G +HR+ S+D SI+ ++ Y + + S Sbjct: 181 AGKAVVYLAERGRVSEVDGQTYLVLEKGSIHRQQKDSRDSSIVSYERYAVDLAAFTPPDS 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V K +++ LL P+ YR + +R+E H RL+ WL+P+ I+ A Sbjct: 241 ETVYKPRERSTMALLFPDTGEGYYRLQ-KGRFRAELHDRLSAWLYPLALAFIAFAALGDP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RQ + + + + + ++P + +Y ++ L+I Sbjct: 300 RTTRQGRGLAVAGAVVGV-IALRIAGFAASSAAVRSPGAVVAIYAAPLGAIALSCLLI 356 >gi|258542097|ref|YP_003187530.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-01] gi|256633175|dbj|BAH99150.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-01] gi|256636232|dbj|BAI02201.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-03] gi|256639287|dbj|BAI05249.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-07] gi|256642341|dbj|BAI08296.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-22] gi|256645396|dbj|BAI11344.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-26] gi|256648451|dbj|BAI14392.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-32] gi|256651504|dbj|BAI17438.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654495|dbj|BAI20422.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-12] Length = 401 Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats. Identities = 76/357 (21%), Positives = 153/357 (42%), Gaps = 8/357 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + + Y+ + + L + + + W++Q L+ ++LV SL + ++++ LIP+ + Sbjct: 33 TLDRYVFHQLLVALLATTGGLAALIWLMQSLRFVSLVVDRGLSLRVFIELTSLLIPSFVA 92 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + + V + + EL ++ G S+ L + L A++ +I F+ I Sbjct: 93 VVLPITTFVVSLFVYQRLAGDRELTVMQAAGLSQFALARAGLGCALMATIMGFLLNLWIV 152 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +Q + + L+E +F ++ D + + I + + TL GI + D R Sbjct: 153 PTSYHAFRQYEFDIRNKMAAFMLQEGVFTKVSDAMTVYIRSRSHDGTLHGIMVEDDRQPG 212 Query: 183 THKIYYAQSGS--IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST-IV 239 A GS I D +IL DG + ++++ FK ++ SA+ Sbjct: 213 NQATILANHGSMMIVNDTPRVILYDGSRQVIDHKTGRLNMLVFKQDSMDLSSAHQEDARF 272 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 A + +L LL+P+P + ++ E +RLT L F ++ +VA + A Sbjct: 273 RDAAEMSLGELLHPDPQQVSE--RDTGKFKVEGWRRLTSPLTCFSFAMVGLVAVLRGAFS 330 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL--FLFCISSIFLLMI 354 R P+ ++ G+ + + +N IP++ L L + +L I Sbjct: 331 RYGNIKRPL-AAVLTVVGLLAINLLLQNLASRNMALIPLIPLVALLPGLICAGILFI 386 >gi|330993929|ref|ZP_08317859.1| hypothetical protein SXCC_03824 [Gluconacetobacter sp. SXCC-1] gi|329758875|gb|EGG75389.1| hypothetical protein SXCC_03824 [Gluconacetobacter sp. SXCC-1] Length = 388 Score = 163 bits (411), Expect = 5e-38, Method: Composition-based stats. Identities = 67/357 (18%), Positives = 158/357 (44%), Gaps = 6/357 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + Y+LR + + + + +V + W+ Q L ++LV SL + L+++G LIP+ Sbjct: 15 LSILDGYMLRQLLLALVATTGALVTLIWLTQSLHFVSLVVGRGLSLRVFLELTGLLIPSF 74 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + + + + EL ++ G S + +P L A + ++ + Sbjct: 75 VAVILPITTFVVVQFIYQRLGGDRELTVMQAAGLSPALMARPGLMCAAIATLVCLVLNVW 134 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P +Q + + + +++ +F ++ D++ + I + + TL GI + D R Sbjct: 135 IVPVSYHAFRQYEFQIRNRMAAFLIQDGVFTQVSDNMTVYIRARDKDGTLHGIMVEDDRT 194 Query: 181 TQTHKIYYAQSGS--IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS-T 237 A+ G+ I D+ ++L +G + ++++ F T+ S +++ T Sbjct: 195 PGAEATILAEEGNLVIINDQPRVVLFNGSRQEIDSHTGRLNVLTFTRNTIDLSSPHTAHT 254 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + AN+ +++ LL+P+ + Y E +RL+ F +I +V A + Sbjct: 255 RLPDANELSIAQLLHPDLHQ--YSRRDESKMFIEAWRRLSTPFCAFSFAMIGLVGAMGGS 312 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RQ + P+ +++ V + + +N +P+++L + +M+ Sbjct: 313 HSRQAGIVRPV-LAILAVVAVQALTLLVQNLASRNLQLMPLMWLCTVGPGIVCAIML 368 >gi|239831521|ref|ZP_04679850.1| permease YjgP/YjgQ family protein [Ochrobactrum intermedium LMG 3301] gi|239823788|gb|EEQ95356.1| permease YjgP/YjgQ family protein [Ochrobactrum intermedium LMG 3301] Length = 402 Score = 163 bits (411), Expect = 5e-38, Method: Composition-based stats. Identities = 113/356 (31%), Positives = 202/356 (56%), Gaps = 6/356 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYILR + FL V I W +Q+LQRI+ +++S ++ +++ S LIP+ Sbjct: 1 MRLIELYILRRVAIMFLAVLGAAVGITWTVQVLQRIDFLTTSGQTFQTIVQFSSLLIPSA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T L++MN+++EL++I+ +G R +++P+L LA ++S+ F+ N Sbjct: 61 IPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAAVISVVSFLVANY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 ++P R ++ + A A L ++E F +L D+LYI++++ + ++ G+FI DSRD Sbjct: 121 VDPYARMNMRAMIANASADLMNVIVQEGNFRKLADNLYIQVAERRADGSIGGLFIADSRD 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--S 236 IYYA G+I +++ +GEV R+ +SI+KF SY S Sbjct: 181 PALDLIYYAADGAIASTPTGDMLLMQNGEVQRRDVSDGTVSIIKFNSYAFDLSQFASAGD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V+ A D+ LS+LLNP+PN+P + L Y++E H+RLTQWL+PV+F +I++ A Sbjct: 241 DFVIYAKDRPLSYLLNPDPNDPILQTRPL-RYKAELHRRLTQWLYPVVFAMIALAFAGDS 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 + ++ F ++S + V+W + + +++ YI ++YL + + Sbjct: 300 R-SHREARVSASFSAISTALLVYWAGYFASDRADKDAGYIVLMYLVPAAVILVTGF 354 >gi|58038773|ref|YP_190737.1| hypothetical protein GOX0298 [Gluconobacter oxydans 621H] gi|58001187|gb|AAW60081.1| Hypothetical transmembrane protein [Gluconobacter oxydans 621H] Length = 390 Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats. Identities = 61/355 (17%), Positives = 145/355 (40%), Gaps = 6/355 (1%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + YILR + + L + W+ Q L +++V SL + ++++ ++P+ + Sbjct: 15 LLDRYILRQLLIALLALTGGATALIWLTQSLHFVSMVVQHGLSLRVFIQLTSLMLPSFIA 74 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + M + EL ++ G S + L +P L A + ++ + Sbjct: 75 VILPITTFLVVLFTYQRMVGDRELTVMRAAGRSPLELARPGLLCAFFSVVLCYVLTLWLA 134 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + + + + L++ +F L +D+ + + + L G+ + D RD Sbjct: 135 PVSYHAFHRYEFQIRNRMAAFLLQDGVFTSLSNDMTVYVRGRTSDGQLHGVLVEDDRDPD 194 Query: 183 THKIYYAQSGS--IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST-IV 239 +H A+ G+ + D+ ++L DG + ++++ F T+ S+ Sbjct: 195 SHTTILAERGTMVVVNDQPRVVLYDGSREEIDRHTGRLNVLTFGRNTIDLTSSRQHNHED 254 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 ++ +L L +P+P+ + +RLT L + F +I +V + A Sbjct: 255 RDPDEMSLRELFHPDPHEVSE--RDRGKNIVVGWRRLTSPLTALSFAMIGLVTVLRGAFS 312 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R P+ I++ G+ + + ++ +P+++L + + M+ Sbjct: 313 RHGNITRPL-IAILTVVGLLAISLMLQNLAGRHLALVPLIWLEAILPAVVCAAML 366 >gi|304321348|ref|YP_003854991.1| putative permease [Parvularcula bermudensis HTCC2503] gi|303300250|gb|ADM09849.1| putative permease [Parvularcula bermudensis HTCC2503] Length = 426 Score = 162 bits (410), Expect = 7e-38, Method: Composition-based stats. Identities = 68/358 (18%), Positives = 152/358 (42%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + YI + + FL+ + W Q+LQR++L+ SL L+++ LIP++ Sbjct: 46 LTLLDRYIFKQVAVPFLLILACTTAVIWFTQMLQRVDLMVEDGGSLLSFLRVTVLLIPSL 105 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ PF L ++EL + G SR+ L +PVL L+IL ++ Sbjct: 106 VGVILPFAVFAAVLYALNLFVTDSELPAMRAAGASRLRLARPVLVLSILAALVSLYINAD 165 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 ++PK ++Q + + S + E +F + + + + P G+FI DS D Sbjct: 166 LQPKTYRQLRQTVEDVRSDIAQSLIREGVFVQPTAQITVFAQEVRPGGQFIGLFINDSSD 225 Query: 181 TQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST- 237 + K Y A+ G + ++L +G V + + + + ++ + + + + Sbjct: 226 PRETKTYTAERGLFQMAETGPKLLLIEGTVQYRDRETGRVDVFRYIETAVDLAAFDRGSG 285 Query: 238 -IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 L ++ +S LLNP+ ++P+ L + YR+ H RL L+ ++++ Sbjct: 286 GRSLDETERTVSQLLNPDLSDPSIA-RLADRYRAAGHARLATPLYCPALAVVALCFLLSP 344 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + R+ + +++ + + G + + Y+ + + + + Sbjct: 345 PISRRGYG-QQVLMAIGCALLLRTGGFLLQGLAADLGALNGLQYIVPLAVILLGSVYL 401 >gi|329114150|ref|ZP_08242912.1| Hypothetical protein APO_0930 [Acetobacter pomorum DM001] gi|326696226|gb|EGE47905.1| Hypothetical protein APO_0930 [Acetobacter pomorum DM001] Length = 401 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 77/357 (21%), Positives = 153/357 (42%), Gaps = 8/357 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + + Y+ + + L + + + W++Q L+ ++LV SL + ++++ LIP+ + Sbjct: 33 TLDRYVFHQLLVALLATTGGLAALIWLMQSLRFVSLVVDRGLSLRVFIELTSLLIPSFVA 92 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + + V + + EL ++ G S+ L K L A++ +I F+ I Sbjct: 93 VVLPITTFVVSLFVYQRLAGDRELTVMQAAGLSQFALAKAGLGCALMATIMGFLLNLWIV 152 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +Q + + L+E +F ++ D + + I + + TL GI + D R Sbjct: 153 PTSYHAFRQYEFDIRNKMAAFMLQEGVFTKVSDAMTVYIRSRSHDGTLHGIMVEDDRQPG 212 Query: 183 THKIYYAQSGS--IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST-IV 239 A GS I D +IL DG + ++++ FK ++ SA+ Sbjct: 213 NQATILANHGSMMIVNDTPRVILYDGSRQVIDHKTGRLNMLVFKQDSMDLSSAHQEDARF 272 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 A + +L LL+P+P + ++ E +RLT L F ++ +VA + A Sbjct: 273 RDAAEMSLGELLHPDPQQVSV--RDTGKFKVEGWRRLTSPLTCFSFAMVGLVAVLRGAFS 330 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL--FLFCISSIFLLMI 354 R P+ ++ G+ + + +N IP++ L L + +L I Sbjct: 331 RYGNIKRPL-AAVLTVVGLLAINLLLQNLASRNMALIPLIPLVALLPGLICAGILFI 386 >gi|110680306|ref|YP_683313.1| hypothetical protein RD1_3119 [Roseobacter denitrificans OCh 114] gi|109456422|gb|ABG32627.1| membrane protein, putative [Roseobacter denitrificans OCh 114] Length = 375 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 62/359 (17%), Positives = 136/359 (37%), Gaps = 5/359 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L + F L +V I W+ + + + + S +S + L+ + +P + Sbjct: 1 MVRLDRYMLSQLLVLFGFFALVLVAILWINRGVSLFDELISDGQSALVFLEFTALGLPKL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P V MN +EL ++ TG+ + L +PVL +++ + + ++ Sbjct: 61 ITTVLPIATFAAAVYVTNRMNNESELTVLQATGSGPVRLARPVLVFGLIVFLMASMLHHV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + T L E F + + + + + L+ +F+ D R Sbjct: 121 LMPLAQQQLGHRQNEIAQNATSRLLTEGRFLHPSEGVTFYTQEIDDDGVLRDVFLSDRRS 180 Query: 181 TQTHKIYYAQSGSIDLDRQAI--ILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + IY A + D + I+ DG R + + ++ F+ ++ + + + Sbjct: 181 VEEGVIYTAAHAYLIRDDERTSLIMVDGLAQRLTTATDRLATANFRDFSFDISALVQNDV 240 Query: 239 VL--KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + LL P + FH R+ LF ++ LI Sbjct: 241 SQRLDPDKMTTFQLLTPWDELSRETGRSIGKITQSFHARIADPLFCIVAALIGFSTLMIG 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 R + ++ + + S + + ++P P+LYL F + + + M+ Sbjct: 301 GFSRFG-VWREVGVAFVLLVAIDGLRSTLQSPVRRDPELWPLLYLPTFISALLVIAMLW 358 >gi|316933708|ref|YP_004108690.1| permease YjgP/YjgQ family protein [Rhodopseudomonas palustris DX-1] gi|315601422|gb|ADU43957.1| permease YjgP/YjgQ family protein [Rhodopseudomonas palustris DX-1] Length = 388 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 76/360 (21%), Positives = 161/360 (44%), Gaps = 5/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M S + YI R SF + + + W+ Q L+ I+L++S +++ L ++G +P + Sbjct: 1 MGSIDRYIFRTTLVSFAVVMGSLTGVIWITQALRGIDLMTSQGQTIITFLGLTGLAVPVL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + + L + ++E+++++ G S I L +P + ++++ + + Sbjct: 61 VLVIAPIALMIAVAHTLNRLAVDSEIIVMNAAGLSPIRLFRPFFYATMVVAALVTVIGAY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P I + ++ + + L+ F +L+ L I++ + P L G+FI D+RD Sbjct: 121 IAPDGLRRIARWDSEITADVLANVLQPGRFAQLEPGLTIRVRERQPGGILVGVFIDDARD 180 Query: 181 TQTHKIYYAQSGSIDLDRQ--AIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN-SST 237 A G++ + + ++L DG + R ++ +++ F Y + + Sbjct: 181 PNERISIIADHGTVLKNEKGSFLVLEDGHLERFQAGKQEPTLVAFSRYAFDMSKFSRARD 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L LL P ++P L +RSE H RL ++P F ++ Sbjct: 241 VSYGIRERYLWELLFPPADDPLLA-RLPTEFRSEMHDRLLAPIYPFFFATVAFAFLGLPR 299 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 RQ + I ++ ++F V + + PY + YL L +I L +IK+ Sbjct: 300 TTRQSRNFSMIG-AVLVAFVVRLAGFALSVIANKTPYVAGLQYLLLAVAIAICLWLIKRN 358 >gi|163746448|ref|ZP_02153806.1| hypothetical protein OIHEL45_13625 [Oceanibulbus indolifex HEL-45] gi|161380333|gb|EDQ04744.1| hypothetical protein OIHEL45_13625 [Oceanibulbus indolifex HEL-45] Length = 377 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 63/368 (17%), Positives = 131/368 (35%), Gaps = 9/368 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YIL + F L +V + W+ + + + + +S + L+ + +P + Sbjct: 1 MARIDRYILSQLLVMFGFFALVLVALFWINRAVVLFDRLIGDGQSALVFLEFTALGLPKL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + V M+ +EL ++ G+ L +PV + + + + + Sbjct: 61 IVTVLPIATFAASVYVTNRMSGESELTVLQAAGSGPWRLARPVFVFGLCVGLMMTALSHF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + +KQ A+ LT L E F D++ + + L+ +F+ D R Sbjct: 121 LVPMAQGQLKQREAEISRNLTAQLLTEGTFLHPSDEVTFYTRAIDNDGVLRDVFLSDRRK 180 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST- 237 IY A + D +I+ +G R ++ KF+ ++ S+ Sbjct: 181 ADEGVIYTAAEAYLARNGDNTTLIMLNGMAQRLDTEQNRLATAKFRDFSFDISPLVSTDD 240 Query: 238 -IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + LL E H RL Q LF ++ +I Sbjct: 241 ATDQSVSSMVTPDLLWDWAGLAAQLDTAPGIIAEELHSRLAQPLFCIVAAMIGFATLILG 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R I+ + + ++ +I + P+ YL + + L M+ + Sbjct: 301 GFSRFG-VWREAVIAFGLLIAIDGLRGTLVVQIRETAALWPLAYLPSLIGAVLTLAMLWQ 359 Query: 357 ----KYTK 360 ++ + Sbjct: 360 AAHPRWIR 367 >gi|85716329|ref|ZP_01047302.1| permease YjgP/YjgQ [Nitrobacter sp. Nb-311A] gi|85696845|gb|EAQ34730.1| permease YjgP/YjgQ [Nitrobacter sp. Nb-311A] Length = 390 Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 76/358 (21%), Positives = 169/358 (47%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M S + YI R SF++ + + + W+ Q L+ I+L++S +++ L I+ IP + Sbjct: 1 MGSIDRYIFRTTLASFVVVLVSLTGVIWITQALRGIDLMTSQGQTILTFLGITSLAIPVL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +++P + ++ L + ++E+++++ G S L +P ++ +++++ + Sbjct: 61 VLIISPIALMIAISHTLHKLATDSEIIVMNAAGLSPFRLFRPFIYATVIVALLVAFIAAY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +K+ A+ + + L+ F +LD +L I+I + P L GIFI D R+ Sbjct: 121 LAPDGMRRLKRWDAEITADVLANVLQPGRFAQLDPNLTIRIRERQPGGQLAGIFIDDRRN 180 Query: 181 TQTHKIYYAQSGSIDLDRQ--AIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS-- 236 + A G++ + + ++L DG + R ++ +++ F Y ++ Sbjct: 181 SDERLSIIADHGTVMKNDKGSFLVLEDGHLERFETGKREPAMVAFDRYAFDMSKFSNRGH 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 +V ++ L L+ P+ N+P + +L +R+E H R T ++P +F ++ Sbjct: 241 DVVYGIRERYLWELIVPDQNDPVVQ-QLQGQFRAELHDRFTAPIYPFVFAALTFAFLGTP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RQ + + +++ FG+ + ++P + YL LF I L +I Sbjct: 300 RTTRQSRNFS-MGAAIAAVFGLRMAGFALSVMTVKSPLAALLQYLLLFGAIGISLRVI 356 >gi|39936124|ref|NP_948400.1| permease YjgP/YjgQ [Rhodopseudomonas palustris CGA009] gi|192291842|ref|YP_001992447.1| permease YjgP/YjgQ family protein [Rhodopseudomonas palustris TIE-1] gi|39649978|emb|CAE28502.1| possible permease [Rhodopseudomonas palustris CGA009] gi|192285591|gb|ACF01972.1| permease YjgP/YjgQ family protein [Rhodopseudomonas palustris TIE-1] Length = 388 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 75/360 (20%), Positives = 158/360 (43%), Gaps = 5/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M S + YI R SF + + + W+ Q L+ I+L++S +++ L ++G +P + Sbjct: 1 MGSIDRYIFRTTLVSFAVVMGSLTGVIWITQALRGIDLMTSQGQTIITFLGLTGLAVPVL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + + L + ++E+++++ G S I L +P + ++++ + I Sbjct: 61 VLVIAPIALMIAVAHTLNRLATDSEIIVMNAAGLSPIRLFRPFFYATMVVAALVIIIGAY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P I + ++ + + L+ F +L+ L I++ + P L G+FI D+R Sbjct: 121 IAPDGLRRIARWDSEITADVLANVLQPGRFAQLEQGLTIRVRERQPGGLLVGVFIDDARA 180 Query: 181 TQTHKIYYAQSGSIDLDRQ--AIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN-SST 237 A G++ + + ++L DG + R ++ +++ F Y + + Sbjct: 181 PNERVSIIADHGTVVKNDKGSFLVLEDGHLERFQTGKQEPALVAFSRYAFDMSKFSRARD 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L LL P N+P L +RSE H RL ++P F ++ Sbjct: 241 VAYGIRERYLWELLWPAENDPLLA-RLPTEFRSEMHDRLLAPIYPFFFAAVAFAFLGLAR 299 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 RQ + ++ ++F V + + PY + YL LF + L +I + Sbjct: 300 TTRQSRNFSMAG-AVLVAFVVRLAGFALSVIANKTPYVAGLQYLLLFVATGTCLWLINRN 358 >gi|23016381|ref|ZP_00056138.1| COG0795: Predicted permeases [Magnetospirillum magnetotacticum MS-1] Length = 372 Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats. Identities = 63/365 (17%), Positives = 151/365 (41%), Gaps = 8/365 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y++R + + + + W+ Q L+ + ++ + S+ LK++ L+P Sbjct: 1 MSGITRYMMRQMLVGMIFVSAALACVLWLTQSLRFVEMIVNKGLSIGAFLKLTILLMPGF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + + EL+++ G S ++L +P + L + +S ++ Sbjct: 61 LVVIIPISLFAVVLFTYNRLIADRELIVLRAAGLSHLSLARPAIILGLAVSAVGYLLSCW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + ++ + + L+E +F + + L I + PN L G+ + D R Sbjct: 121 IIPHTVRSFHEMQWTIRNDIGNVLLQEGMFNKFGEGLTIYVRSRTPNGELTGLLVHDKRH 180 Query: 181 TQTHKIYYAQSGS--IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS-- 236 Q A+ G+ +++ +G +P + +S++ F +YT+ +A + Sbjct: 181 PQRAVTLMAERGALVYTEQGPRVLMINGNRQEVTPGTGKLSLLYFDNYTVDFNTATGNKP 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 A +++ LL+ + + L ++SE H RL L+ + F L++ Sbjct: 241 DRFRDARERSTLELLSMD--DSMENKGELRRFKSELHSRLASPLYNLGFPLLAAAVLLTS 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R+ + + + + ++ V + N ++P++YL + L ++ + Sbjct: 299 GFDRRGQTVQVMVSA-ALMVAVQALALGASNLSSGNLAFVPLIYLNATLPIAFGLWVLAR 357 Query: 357 -KYTK 360 + + Sbjct: 358 PPWPR 362 >gi|110634108|ref|YP_674316.1| permease YjgP/YjgQ [Mesorhizobium sp. BNC1] gi|110285092|gb|ABG63151.1| permease YjgP/YjgQ [Chelativorans sp. BNC1] Length = 416 Score = 160 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 113/358 (31%), Positives = 186/358 (51%), Gaps = 7/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YILR F S +++ I W Q+L R++LV+SS +S ++ +P+V Sbjct: 24 MKVIERYILRRTLAIFAASLAWLLVIVWTTQVLNRLDLVTSSGQSAATFFTVAFLTLPSV 83 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P++ PF + L +MN ++EL++I G+ R T+I P+L +AI+ SI F N Sbjct: 84 VPVIMPFVIGIAVAQTLATMNADSELVVISAAGSPRSTIIWPILIIAIIASIAAFAINNT 143 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R ++ + A A L + L E F ++ D ++++IS+ PN L GIF++DSRD Sbjct: 144 LEPYSRQKMRTILANANADLITTVLREGSFRKVVDGIFVQISERLPNGELGGIFVIDSRD 203 Query: 181 TQTHKIYYAQSGSIDLDRQAIILN--DGEVHRKSPISKDISIMKFKSYTLQTESANSST- 237 Y A+ G+ IL +GEV R + D+S+++F SY + Sbjct: 204 PNLKLAYRAERGATVKRDGGNILVLLEGEVQR-QVANGDVSVIRFDSYAFDLSQFTNGEG 262 Query: 238 -IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 L D+ LS LL P+PN+ + + +++R+E H R ++WL+P++F LI I A Sbjct: 263 VPTLFPKDRYLSELLEPDPNDKFFA-KNPQSFRAELHTRFSEWLYPIVFALIGIAVAGDA 321 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R+ + +HP+ +L+I V W Y ++ E P Y +LY + I Sbjct: 322 RSFRETR-LHPMVTTLTIGLLVRWAGFYASNEAETVPAYTYLLYAAPLGTILLCCWFI 378 >gi|91977434|ref|YP_570093.1| permease YjgP/YjgQ [Rhodopseudomonas palustris BisB5] gi|91683890|gb|ABE40192.1| permease YjgP/YjgQ [Rhodopseudomonas palustris BisB5] Length = 388 Score = 160 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 72/359 (20%), Positives = 159/359 (44%), Gaps = 5/359 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + + YI R SF + + + W+ Q L+ I+L++S +++ L ++G +P + Sbjct: 1 MGAIDSYIFRTTLTSFAVVMASLTGVIWITQALRGIDLMTSQGQTIVTFLGLTGLAVPVL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + + L + ++E+++++ G S I L +P ++ I +++ + + Sbjct: 61 ILVIAPIALMIAVAHTLNRLATDSEIIVMNAAGLSPIRLFRPFVYATIAVAVLVTLIGAY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P I + ++ + + L+ F +L+ +L I++ + L G+FI D RD Sbjct: 121 IAPDGLRRIARWDSEITADVLANVLQPGRFAQLEQNLTIRVRERQAGGLLVGVFIDDRRD 180 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN-SST 237 A G++ D ++L DG + R ++ +++ F Y + + Sbjct: 181 PNDRVSIIADHGTVVKNSDGSFLVLEDGHLERFQAGKQEPALVAFSRYAFDMSKFSRARD 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + L L+ P+P +P ++ +R+E H RL ++P F ++ Sbjct: 241 VTYGIREHYLWELIWPDPKDPLLA-QVPTQFRAEMHDRLLAPIYPFFFAAVTFAFLGMPR 299 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 RQ + + +++ +F V + PY I YL L + L +I++ Sbjct: 300 TTRQSRNFSMVG-AVACAFVVRLAGFALSVVANHTPYIAGIQYLLLAVAIGVSLWLIRR 357 >gi|170743203|ref|YP_001771858.1| permease YjgP/YjgQ family protein [Methylobacterium sp. 4-46] gi|168197477|gb|ACA19424.1| permease YjgP/YjgQ family protein [Methylobacterium sp. 4-46] Length = 388 Score = 160 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 84/308 (27%), Positives = 147/308 (47%), Gaps = 5/308 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI R +FL + + WV Q L+ ++LV++ +++ I I+G IP + Sbjct: 1 MKQIERYIFRIALGAFLACLAGLTGVIWVTQALRELDLVTAKGQTVLIFFLITGLSIPAL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L +V P M + L +N ++EL+++ G S L++P L LA+++S L Sbjct: 61 LTVVAPVALFMAVVHALNRLNGDSELIVMSAAGMSPRQLLRPFLTLALIVSAALGFLTIQ 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P ++ L + + + ++E F LD+ + + P L GIF+ D R+ Sbjct: 121 VLPSSFQELRDLLTRVRGDFIANVVQEGQFTSLDNGITFHFRESAPGGVLLGIFMQDRRE 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT--ESANSS 236 Y A+ G + ++L G +HR+ S+D SI+ F Y + + + Sbjct: 181 AGRSVTYLAERGQALDLDGQTYLVLEKGSIHRQQQNSRDASIISFARYAVDLAAFTPPDT 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V K +++ + LL P+PN Y+ + +R+E H RLT WL+P+ LI+ A Sbjct: 241 DTVYKPRERSTAQLLFPDPNEHYYK-LVKGRFRAELHDRLTSWLYPLAMALIAFAALGDP 299 Query: 297 ALVRQRKK 304 RQ + Sbjct: 300 RTTRQGRG 307 >gi|300023217|ref|YP_003755828.1| permease YjgP/YjgQ family protein [Hyphomicrobium denitrificans ATCC 51888] gi|299525038|gb|ADJ23507.1| permease YjgP/YjgQ family protein [Hyphomicrobium denitrificans ATCC 51888] Length = 398 Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats. Identities = 78/361 (21%), Positives = 162/361 (44%), Gaps = 7/361 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ F Y+ R SF + + + I W+ L++ N+V+S + +L+K++ +P + Sbjct: 1 MRIFSKYVFRQAAGSFALIMVSLTGIVWIALALRQFNVVTSQGQDTWMLIKMTSLAVPNL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ PF F + + L +N ++EL++I +G T +P+L LA+L+SIFL + Sbjct: 61 MAVIAPFSFLIAALHTLNRLNTDSELIVISASGAKVWTAARPLLLLALLVSIFLAFVSHF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +P ++ + + L ++ F + L I + N L G+ + D+RD Sbjct: 121 AQPWSMRQLRDYMVQVRSDLLTQVIQPGRFTSPETGLMFHIRDRDANGELLGLVMHDTRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIIL--NDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + Y A+ G++ L G + R++ + I+ F Y + + Sbjct: 181 KAQSQSYLAEHGTLVKQDGTAYLVMTVGHIIRRTDANGPPQIVAFDKYIVDLDRFEPQDG 240 Query: 239 VL---KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 K ++ S L+NP+P + +Y+ + +RSE H+R L+P+ F + I + Sbjct: 241 GPGDLKPRERYFSELINPDPESSSYKNQ-PGQFRSELHERFVTPLYPLAFAFLIIAFVGQ 299 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 R + + ++ I+ I + + +NP + + Y L+++K Sbjct: 300 AQSTRTSRM-QSLVVTFVIAATCRLAGLAITNAMVRNPSMVAVAYGLPIGAIVYSLIVLK 358 Query: 356 K 356 + Sbjct: 359 R 359 >gi|86357092|ref|YP_468984.1| putative permease protein [Rhizobium etli CFN 42] gi|86281194|gb|ABC90257.1| putative permease protein [Rhizobium etli CFN 42] Length = 393 Score = 159 bits (401), Expect = 6e-37, Method: Composition-based stats. Identities = 129/356 (36%), Positives = 218/356 (61%), Gaps = 5/356 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YILR +G+ FL++ L ++ I W Q+LQRINLV+ S +S+ K++ ++P++ Sbjct: 1 MKLLETYILRRVGQMFLVALLPVLAIIWTTQVLQRINLVTDSGQSIGSFAKLATMILPSI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T LT+MN ++EL +ID G R L++P+L LA ++S+F F +NI Sbjct: 61 IPVVLPFALVIAITQTLTTMNNDSELTVIDAAGARRTILVRPILLLAAVISVFSFFVDNI 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP+ ++ +Q+ A+ L S +EE F +LD+ LY++IS+ L+G+F+ D RD Sbjct: 121 VEPRAKTVARQMIAETYADLLSSVIEEKTFRKLDEGLYVQISQRLAGRMLKGLFVADERD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE--SANSSTI 238 IYYA+ G++D +I++DGEVHRK+P ++S++ F SY+ + + Sbjct: 181 PAYELIYYAKEGAVDDTGTTLIMHDGEVHRKTPDG-NVSVINFDSYSFDLSDMTESRGQA 239 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 LKA+D++L FL NP+PN+ +Y ++YR+E H+RLT W+ PV+F L S+ A Sbjct: 240 TLKASDRDLWFLFNPDPNDKDYTIR-PQSYRAELHRRLTDWILPVVFALFSLAIAGDAR- 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + ++HP+ +L +F + W Y ++I+ +P YI +LY S + ++ + Sbjct: 298 SHREARLHPMVSALGYAFALRWAAFYAANQIDTDPEYIAVLYALPIVSSIVSIIFL 353 >gi|148255228|ref|YP_001239813.1| putative permease [Bradyrhizobium sp. BTAi1] gi|146407401|gb|ABQ35907.1| putative permease [Bradyrhizobium sp. BTAi1] Length = 389 Score = 159 bits (401), Expect = 7e-37, Method: Composition-based stats. Identities = 81/358 (22%), Positives = 162/358 (45%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M S + YI R SF + + + + W+ Q L+ I+L++S +++ L I+G +IP++ Sbjct: 1 MGSIDRYIFRTTLASFAVVLVSLTGVIWITQALRGIDLMTSQGQTILTFLGITGLVIPSL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + ++ L + ++E+++++ G S I L P + +++I + Sbjct: 61 LGVIAPIALMIAVSHTLNKLATDSEIIVMNAAGMSPIRLFVPFAYATCVVAILVTFIAAF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P IKQ A+ + + L+ F +LD +L I+I + P LQGI I D RD Sbjct: 121 FAPDGLRRIKQWDAEITADVLANILQPGRFAQLDQNLTIRIRERQPGGELQGILIDDRRD 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS-- 236 + A+ G++ + D ++L DG + R ++ +++ F Y ++ Sbjct: 181 PKERITIIAEKGTVVKNPDGSFLVLEDGNLERFEVGKREPAMVAFARYAFDMSKFSNQGR 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L ++ L L+ P ++P Y+ ++ +R E H R ++P F ++ Sbjct: 241 DVTLGIRERYLWELMAPAEDDPIYK-QIPGQFRQELHDRFLAPIYPFAFAALTFAFLGAP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RQ + ++ FGV + P + YL LF + + + +I Sbjct: 300 RTTRQSRNFS-FGSAILAVFGVRMAGFACSVMTVKTPVAALVQYLMLFGVLGLSIWII 356 >gi|92117863|ref|YP_577592.1| permease YjgP/YjgQ [Nitrobacter hamburgensis X14] gi|91800757|gb|ABE63132.1| permease YjgP/YjgQ [Nitrobacter hamburgensis X14] Length = 389 Score = 159 bits (401), Expect = 7e-37, Method: Composition-based stats. Identities = 74/358 (20%), Positives = 164/358 (45%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M S + YI R SF++ + + + W+ Q L+ I+L++S +++ L I+ IP + Sbjct: 1 MGSIDKYIFRTTLASFVVVLVSLTGVIWITQALRGIDLMTSQGQTILTFLGITSLAIPVL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +++P + ++ L + ++E+++++ G S L +P ++ +++++ + Sbjct: 61 VLIISPIALMIAISHTLHKLATDSEIIVMNAAGLSPFRLFRPFIYATVVVALLVAFIAAY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +K+ A+ + + L+ F +LD +L I++ + P L GIFI D R+ Sbjct: 121 LAPDGMRRLKRWDAEITADVLANVLQPGRFAQLDPNLTIRVRERQPGGLLVGIFIDDRRN 180 Query: 181 TQTHKIYYAQSGSIDLDRQ--AIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS-- 236 A G++ + +IL DG + R ++ +++ F+ ++ Sbjct: 181 PNERLSIVADHGTVMKNDNGSFLILEDGHLERLEAGKREPNMVAFRRNAFDMSKFSNRGH 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 +V ++ L L+ P P +P + +L +R+E H R T ++P F ++ Sbjct: 241 DVVYGIRERYLWELIAPEPTDPLVQ-QLPGQFRAELHDRFTAPIYPFAFAALTFAFLGTP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RQ + + ++ FG+ + ++P + YL LF + L +I Sbjct: 300 RTTRQSRNFS-MGAAIVTVFGLRMAGFALSVMAVKSPTAPLLQYLLLFAAIGVSLRVI 356 >gi|220925665|ref|YP_002500967.1| permease YjgP/YjgQ family protein [Methylobacterium nodulans ORS 2060] gi|219950272|gb|ACL60664.1| permease YjgP/YjgQ family protein [Methylobacterium nodulans ORS 2060] Length = 388 Score = 159 bits (401), Expect = 7e-37, Method: Composition-based stats. Identities = 84/307 (27%), Positives = 149/307 (48%), Gaps = 5/307 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI R +FL + + WV Q L+ ++L+++ ++L I I+G IP + Sbjct: 1 MKQIERYIFRIALSAFLACLAGLTGVIWVTQALRELDLITAKGQTLLIFFLITGLSIPAL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L +V P M + L +N ++EL+++ G S L++P L LA+++ + + Sbjct: 61 LTIVAPVALFMAVLHALNRLNGDSELIVMSAAGMSPRHLMRPFLTLALIVGLAVAFLTIQ 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P ++ L + + + ++E F LD + + P TL GIF+ D R+ Sbjct: 121 VLPSSFQELRDLLTRVRGDFIANVVQEGQFTSLDSGITFHFRERGPGGTLLGIFMQDRRE 180 Query: 181 TQTHKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT--ESANSS 236 +Y A+ G + ++L G +HR+ P S+D SI+ F Y + + + Sbjct: 181 AGRSVVYLAERGQAVDLDGQTYLVLEKGSIHRQQPNSRDASIITFARYAVDLAAFTPPDT 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V K +++ + LL P+PN Y+ + +R+E H RLT WL+P+ LI+ A Sbjct: 241 DTVYKPRERSTAQLLFPDPNEHYYK-LVKGRFRAELHDRLTAWLYPLAMALIAFAALGDP 299 Query: 297 ALVRQRK 303 RQ + Sbjct: 300 RTTRQGR 306 >gi|190891136|ref|YP_001977678.1| permease [Rhizobium etli CIAT 652] gi|190696415|gb|ACE90500.1| putative permease protein [Rhizobium etli CIAT 652] Length = 403 Score = 159 bits (400), Expect = 8e-37, Method: Composition-based stats. Identities = 129/356 (36%), Positives = 219/356 (61%), Gaps = 5/356 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YILR +G+ FL++ L ++ I W Q+LQRINLV+ S +S+ K++ ++P++ Sbjct: 11 MKLLETYILRRVGQMFLVALLPVLAIIWTTQVLQRINLVTDSGQSIGSFAKLATMILPSI 70 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T LT+MN ++EL +ID G R L++P+L LA ++S+F F +NI Sbjct: 71 IPVVLPFALVIAITQTLTTMNNDSELTVIDAAGARRSILVRPILLLAAVISVFSFFVDNI 130 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP+ ++ +Q+ A+ L S +EE F ++D+ LY++ISK L+G+F+ D RD Sbjct: 131 VEPRAKTVARQMIAETYADLLSSVIEEKTFRKIDEGLYVQISKRLAGRMLKGLFVADERD 190 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE--SANSSTI 238 IYYA+ G++D +I++DGEVHRK+P ++S++ F SY+ + + Sbjct: 191 PAYELIYYAKEGAVDDSGTTLIMHDGEVHRKTPDG-NVSVINFDSYSFDLSDMTESRGQA 249 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 LKA+D++L FL NP+PN+ +Y ++YR+E H+RLT W+ PV+F L S+ A Sbjct: 250 TLKASDRDLWFLFNPDPNDKDYTIR-PQSYRAELHRRLTDWILPVVFALFSLAIAGDAR- 307 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + ++HP+ +L+ +F + W Y ++I+ +P YI +LY S + ++ + Sbjct: 308 SHREARLHPMVSALAYAFALRWAAFYAANQIDTDPEYIAVLYGLPIVSSIVSIIFL 363 >gi|254501938|ref|ZP_05114089.1| putative permease, YjgP/YjgQ family [Labrenzia alexandrii DFL-11] gi|222438009|gb|EEE44688.1| putative permease, YjgP/YjgQ family [Labrenzia alexandrii DFL-11] Length = 395 Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats. Identities = 80/360 (22%), Positives = 169/360 (46%), Gaps = 6/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + E YI+R +F ++ + + W Q L++++LV+S +++ + I+ +P + Sbjct: 1 MNTLERYIIRRTAYAFTLTLAAMTGVVWATQALRQLDLVTSKGQTIVQFIGITMLALPFL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V PF + VL S++ ++EL++ID +G SR ++KPVL A ++ + + Sbjct: 61 IVTVAPFALMIALILVLNSLSGDSELIVIDASGGSRFLVLKPVLAFATIIMLLVSALSLY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + ++ + + L + ++ F +++ L I + TL G+ + D+RD Sbjct: 121 VAPAGLAQLRTEITRVRADLVANIVKPGRFINVEEGLTFHIRNRSGKGTLDGLLMHDTRD 180 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 T Y A++G+I R +++ +G + R+ D+SI++F+SY + +S Sbjct: 181 PDTAFTYQAETGNIVEAAGRTLLVMQNGTIQRRPKQVGDMSIVRFQSYAFDLSNLIPEAS 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V K ++++ + LL P P N + E R+E H+R + L+ + F LI Sbjct: 241 EPVFKPSERSTANLLGP-PGNDYFAVTHPERLRAEIHERFSLPLYCLSFALIVFAFLGVA 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 RQ + + + +++ + I + + Y+ + L+ I + Sbjct: 300 RTTRQGRGMAIVG-AITCCVLLRTTGFGITAISNDSAVLYAMRYVVPVLGGGLALVSILR 358 >gi|163735795|ref|ZP_02143224.1| hypothetical protein RLO149_00570 [Roseobacter litoralis Och 149] gi|161390881|gb|EDQ15221.1| hypothetical protein RLO149_00570 [Roseobacter litoralis Och 149] Length = 375 Score = 158 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 63/359 (17%), Positives = 135/359 (37%), Gaps = 5/359 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L + F L +V I W+ + + + + S +S + L+ + +P + Sbjct: 1 MVRLDRYMLSQLLVLFGFFALVLVAILWINRGVSLFDQLISDGQSALVFLEFTALGLPKL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P V MN +EL ++ TG+ + L +PVL +++ + + ++ Sbjct: 61 ITTVLPIATFAAAVYVTNRMNNESELTVLQATGSGPVRLARPVLVFGVIVFLMASVLHHV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + T L E F + + + + + L+ +F+ D R Sbjct: 121 LMPLAQQQLGHRQNEIAQNATSRLLTEGRFLHPSEGVTFYTQQIDDDGVLRDVFLSDRRH 180 Query: 181 TQTHKIYYAQSGSIDLDRQAI--ILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + IY A + D I+ DG R + + ++ F+ ++ + + + Sbjct: 181 VEEGVIYTAAHAYLIRDEDRTSLIMVDGLAQRLTTATDRLATANFRDFSFDISALVQNDV 240 Query: 239 VL--KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + LL P + T FH R+ LF ++ LI Sbjct: 241 SQRLDPDRMTTFQLLTPWDQLSRETGRSIGTISQSFHARIADPLFCIVAALIGFSTLMIG 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 R + + + + S + + ++P P+LYL F + + + M+ Sbjct: 301 GFSRFG-VWREVAFAFVLLVAIDGVRSTLQSPVRRDPELWPLLYLPTFISALLVIAMLW 358 >gi|27379218|ref|NP_770747.1| permease [Bradyrhizobium japonicum USDA 110] gi|27352369|dbj|BAC49372.1| bll4107 [Bradyrhizobium japonicum USDA 110] Length = 389 Score = 158 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 74/358 (20%), Positives = 158/358 (44%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M S + YI R SF + + + + W+ Q L+ I+L++S +++ L I+ ++P + Sbjct: 1 MGSIDRYIFRTTLASFALVLVSLTGVIWITQALRGIDLMTSQGQTILTFLGITSLVVPAL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +++P + ++ L + ++E+++++ G S L P + ++++ + Sbjct: 61 VLIISPIALMIAISHTLNKLATDSEIIVMNAAGFSPFRLFYPFFYATCVVALLVAFIAAY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P IKQ A+ + + L+ F +LD +L I+I + P L GIFI D RD Sbjct: 121 LAPDGMRRIKQWDAEITADVLTNILQPGRFAQLDKNLTIRIRERLPGGILAGIFIDDRRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQ--AIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS-- 236 A+ G + + ++L G + R +D +++ F Y + Sbjct: 181 PNERVSIVAEHGEVMKNDTGSFLVLETGNLQRFEVGKRDPALVAFGRYGFDMSKFSGQGR 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L ++ L L +P+ ++P Y+ ++ +RS H L ++P F +++ Sbjct: 241 DVTLGIRERYLWELFSPSEDDPVYK-QIPGQFRSALHDSLLAPIYPFAFAVLTFAFLGAP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RQ + I S+ FG+ ++P + + Y + + + MI Sbjct: 300 RTTRQSRNFS-IGSSIVAVFGLRMAGFACSVMAVKSPAAVLVQYAMVLGAIGVGMWMI 356 >gi|241203949|ref|YP_002975045.1| permease YjgP/YjgQ family protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857839|gb|ACS55506.1| permease YjgP/YjgQ family protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 393 Score = 158 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 128/356 (35%), Positives = 219/356 (61%), Gaps = 5/356 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YILR +G+ FL++ L ++ I W Q+LQRINLV+ S +S+ K++ ++P++ Sbjct: 1 MKLLETYILRRVGQMFLVALLPVLAIIWTTQVLQRINLVTDSGQSIGSFAKLATMILPSI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T LT+MN ++EL +ID G R LI+P+L LA +S+F F +N+ Sbjct: 61 IPVVLPFALVIAITQTLTTMNNDSELTVIDAAGARRSVLIRPILLLAAAISVFSFFVDNV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP+ ++ ++Q+ A+ L S +EE F +LD+ LY++ISK L+G+F+ D RD Sbjct: 121 VEPRAKTVVRQMIAETYADLLSSVIEEKTFRKLDEGLYVQISKRMAGRMLKGLFVADERD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE--SANSSTI 238 IYYA+ G++D +I+++GEVHRK+P ++S++ F SY+ + N Sbjct: 181 PAYELIYYAKEGAVDDTGTTLIMHEGEVHRKTPDG-NVSVINFDSYSFDLSDMTENRGQA 239 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 L+A+D++L FL+NP+P + +Y ++YR+E H+RLT W+ PV+F L S+ A Sbjct: 240 TLRASDRDLWFLINPDPADKDYTIR-PQSYRAELHRRLTDWILPVVFALFSLAIAGDAR- 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + ++HP+ +L+ +F + W Y ++I+ +P YI +LY S + ++ + Sbjct: 298 SHREARLHPMVSALAYAFAMRWAAFYAANQIDTDPEYIAVLYAIPIVSSIVSIVFL 353 >gi|126728787|ref|ZP_01744602.1| Predicted permease [Sagittula stellata E-37] gi|126710717|gb|EBA09768.1| Predicted permease [Sagittula stellata E-37] Length = 376 Score = 158 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 65/359 (18%), Positives = 137/359 (38%), Gaps = 5/359 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ F+ Y+L + F L +V + WV + + + + + S I+L+ + +P V Sbjct: 1 MQRFDRYVLSQLMVLFGFFALVLVSVYWVNRAVVLFDRLINDGHSARIVLEFTALSLPAV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V P V ++ ++EL ++ TG S L +PVL I++++ + + ++ Sbjct: 61 IALVLPMATFAAAVYVTNRLSGDSELTVVKATGFSPWRLARPVLVFGIMVTLMMSVLTHV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ ++ + +++ L E F + I P TLQ + + D R+ Sbjct: 121 LVPQSLKQLRMREQELSSSVSARLLREGTFLHPSKGITFYIRDITPEGTLQDVLLSDRRE 180 Query: 181 TQTHKIYYAQSGSIDLDR--QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + IY A + D +++ G + +S F +T +++ Sbjct: 181 PEREVIYTADRAYLIRDDEGPKMVMLAGLAQTMNTTDMRLSTTNFSDFTYDLTGLITASP 240 Query: 239 V--LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 K + + LL + + E H R L V+ LI A Sbjct: 241 QKRRKLDAIPTTELLLNTDGIAAETGQQIGEVLEEAHMRFQGPLLCVVAALIGYSALMVG 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 R I ++ + V S + + +NP P++Y + +++ Sbjct: 301 VFSRFG-VTRQIVFAIFLLVVVKLVESAVTDPVVRNPRLWPLVYAPSVTGLAFTWILLW 358 >gi|222085453|ref|YP_002543983.1| permease protein [Agrobacterium radiobacter K84] gi|221722901|gb|ACM26057.1| permease protein [Agrobacterium radiobacter K84] Length = 391 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 138/363 (38%), Positives = 226/363 (62%), Gaps = 7/363 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK FE YI+R +G FL++ L ++ I W Q+LQRINLV+ S +S+ K++ ++PT+ Sbjct: 1 MKLFETYIVRRVGMMFLVALLPVLAIIWTTQVLQRINLVTDSGQSIGSFAKLATLILPTI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T LT+MN ++EL +++ G R +I+P++ LAI +S+F F +N+ Sbjct: 61 IPVVLPFALVIGITQTLTAMNSDSELTVMEAAGARRSIIIRPIMILAIAISVFSFFVDNM 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EPK R +Q+ A+A L + +EE F R++D LY++I++ L+G+F+VDSRD Sbjct: 121 VEPKARVAARQMVAEAYADLLSTVIEEKNFRRIEDGLYVQITQRMSGRILKGLFVVDSRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE--SANSSTI 238 IYYA+ G++D ++++ DGEVHRK+ D+S++KF SY+ + + Sbjct: 181 PAFDLIYYAKEGAVDASGSSLLMRDGEVHRKTSDG-DVSVIKFDSYSFDLSDMTQSRGQA 239 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 L+A D++L FLLNP+PN+ +Y+ + YRSE H+RLT W P IF LIS+V A Sbjct: 240 TLRAGDRSLGFLLNPDPNDADYKAKPSG-YRSELHRRLTDWALPAIFALISLVIAGDAR- 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC--ISSIFLLMIKK 356 + ++HP+ +L+I+F + W Y ++IE PY++ ILY + +IFLL + Sbjct: 298 SHREARLHPMVSALTIAFALRWADFYAANQIETAPYFVGILYGINIAATLIAIFLLFRNR 357 Query: 357 KYT 359 + + Sbjct: 358 RMS 360 >gi|197105168|ref|YP_002130545.1| hypothetical protein PHZ_c1705 [Phenylobacterium zucineum HLK1] gi|196478588|gb|ACG78116.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1] Length = 378 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 62/361 (17%), Positives = 141/361 (39%), Gaps = 7/361 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + Y+LR + +++ L + +A + Q L ++L+ + +S + LK++ +P + Sbjct: 1 MRLIDRYLLRQLLGPVILATLALTGVALLSQTLSGLDLIVNQRQSALVFLKVTLLAMPQL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + MV P + L ++ E+++ G SR +I P + LA ++ + Sbjct: 61 INMVLPIAVFVAALVALNRLHTEQEIVVCFAGGMSRWRVISPAIRLACTVAFLALLMNLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 ++P +++ + + L + + E F L + + L+ +FI RD Sbjct: 121 VQPAAYREMRRELFQVRTDLASTLVREGEFTEPAPGLTVYAQGVDGAGNLENLFIHQMRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIIL--NDGEVHRKSPISKDISIMKFKSYTLQTESANSST- 237 + Y A+ G + + +L +G S + ++ + F Y + SS Sbjct: 181 DGSATTYTAEQGRVGRSQGRPVLVMRNGSNQEFS-STGVLNYLTFDEYIFDLSALTSSDE 239 Query: 238 -IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + K +D+ L P+ ++ +E H R++ L+ + F +++ A Sbjct: 240 LVHYKPSDRYPHELFFPDLQQ-DWERRNRLDLLAEGHARISSPLYNIAFMAMALSAIIGG 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R I + + V + E + YL +++ I + Sbjct: 299 GFSRLGYGRR-IAAMGAAAAIVRILGFQVQAASEDAAWLNVFQYLIPLAATALAFRSIFR 357 Query: 357 K 357 + Sbjct: 358 Q 358 >gi|90423816|ref|YP_532186.1| permease YjgP/YjgQ [Rhodopseudomonas palustris BisB18] gi|90105830|gb|ABD87867.1| permease YjgP/YjgQ [Rhodopseudomonas palustris BisB18] Length = 388 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 73/360 (20%), Positives = 159/360 (44%), Gaps = 5/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M S + YI R SF + + + W+ Q L+ I+L++S +++ L ++G +P + Sbjct: 1 MGSIDSYIFRTTLTSFAVILASLTGVIWITQALRGIDLMTSQGQTILTFLGLTGMAVPVL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + + L + ++E+++++ G S + L++P +F +++++I + Sbjct: 61 VLVIAPIALMIAVAHTLNRLANDSEIIVMNAAGLSPLRLVRPFMFASVVVAILVGFISAY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ I + ++ + + L+ F +L+ +L I++ + P L G+FI D RD Sbjct: 121 VAPEGLRRINRWDSEITADILANILQPGRFSQLETNLTIRVRERQPGGVLVGVFIDDRRD 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN-SST 237 A G++ + D ++L DG + R +D +++ F Y + + Sbjct: 181 PNERISIIADHGTVLKNNDGSFLVLEDGTLQRFESGKRDPALVAFGRYAFDMSKFSRARD 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L LL P P++ Y L +R+E H R+ ++P +F ++ Sbjct: 241 VSYGIRERYLWELLWPEPDDALYA-RLPNQFRAEMHDRVLAPIYPFVFAALTFAFLGLPR 299 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 RQ + +++ F V P YL L + L +I + Sbjct: 300 TTRQSRNFSMAG-AIAAVFVVRLAGFACSIVASSTPAVAIAQYLLLAAALAGSLWVIARN 358 >gi|146340304|ref|YP_001205352.1| putative permease [Bradyrhizobium sp. ORS278] gi|146193110|emb|CAL77121.1| putative permease [Bradyrhizobium sp. ORS278] Length = 389 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 78/358 (21%), Positives = 164/358 (45%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M S + YI R SF + + + + W+ Q L+ I+L++S +++ L I+G +IP++ Sbjct: 1 MGSIDRYIFRTTLASFALVLVSLTGVIWITQALRGIDLMTSQGQTILTFLGITGLVIPSL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + ++ L + ++E+++++ G S I L P + ++++ + + + Sbjct: 61 LGVIAPIALMIAVSHTLNKLATDSEIIVMNAAGMSPIRLFVPFAYATCVVALLVTLLASY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P IKQ A+ + + L+ F +LD +L I+I + P L+ I I D RD Sbjct: 121 IAPDGLRRIKQWDAEITADVLTNILQPGRFAQLDQNLTIRIGERQPGGELKNILIDDRRD 180 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS-- 236 + A+ G++ D ++L DG + R ++ +++ F Y ++ Sbjct: 181 PKERITIIAEKGTVVKNADGSFLVLEDGNLERFEIGKREPAMVAFARYAFDMSKFSNQGR 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L ++ + L+ P ++P Y+ ++ +R E H R ++P F ++ Sbjct: 241 DVTLGIRERYVWELMAPAEDDPIYK-QIPGQFRQELHDRFLAPIYPFAFAALTFAFLGAP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RQ + ++ FGV + P I Y+ LF + ++ + +I Sbjct: 300 RTTRQSRNFS-FGSAILAVFGVRMAGFACSVMTVKTPIAALIQYVMLFGVLALSIWII 356 >gi|254477380|ref|ZP_05090766.1| permease YjgP/YjgQ [Ruegeria sp. R11] gi|214031623|gb|EEB72458.1| permease YjgP/YjgQ [Ruegeria sp. R11] Length = 388 Score = 157 bits (395), Expect = 3e-36, Method: Composition-based stats. Identities = 66/358 (18%), Positives = 127/358 (35%), Gaps = 5/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M ++ Y+L F L +V + W+ + + + + +S + + + +P + Sbjct: 1 MSRYDRYVLSQYLLFFGFFALILVAVFWINRAVVLFDRLIGDGQSALVFFEFTALSLPNL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + MV P + V +N +EL ++ TGTS + KP L I+ +I + I + Sbjct: 61 IRMVLPVAAFASSVWVTNRLNSESELTVLRATGTSPWQMAKPALAFGIITAIMMSILTHF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +T++Q + +T L E F + I + +P+ TL +F+ D R+ Sbjct: 121 LLPTSIATLEQRETEISRNVTAKLLSEGDFLHPTRGVTFYIGRIDPDGTLNDVFLSDRRN 180 Query: 181 TQTHKIYYAQSGSIDLDRQAI--ILNDGEVHRKSPISKDISIMKFKSYTLQTESA--NSS 236 Y + D ++ DG R ++ +S F ++ S + Sbjct: 181 PDQVVTYTGGKAYLVRDEDRTHLVMVDGMSQRIDMQTRRLSSTIFSDFSYDISSLANKAE 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 LL P E H R + L V LI A Sbjct: 241 EKTRNIRAIPSLELLQDRARLIAEGPYSAGALAEELHLRFARALVCVAVALIGFSALMVG 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R ++ + V + + +N P++YL + L+ + Sbjct: 301 GFSRFG-VWRQALVAFVLLIFVEGLRGVVSEPVLENADMWPLIYLPTAVGLAAALIFL 357 >gi|23008753|ref|ZP_00050063.1| COG0795: Predicted permeases [Magnetospirillum magnetotacticum MS-1] Length = 339 Score = 157 bits (395), Expect = 3e-36, Method: Composition-based stats. Identities = 72/339 (21%), Positives = 149/339 (43%), Gaps = 5/339 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E YI R +FL + + WV Q L+ ++LV++ ++L + L I+G +PT+ Sbjct: 1 MTQIERYIFRIALGAFLTCLIGLTGTIWVTQALRELDLVTAKGQTLLVFLFITGLSLPTL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + L +N ++EL+++ G L++P + LA+ +S+ Sbjct: 61 ITVIAPVALFIACVYALNRLNGDSELIVMSAAGMPPRQLLRPFVTLALAISVVTAFLTIQ 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P ++ + + + + ++E F LD + + + +LQG+FI D R+ Sbjct: 121 VMPSSFQELRDVLTRVRGDFVANVVKEGQFTALDSGITFHFRERGADGSLQGLFIQDKRE 180 Query: 181 TQTHKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT--ESANSS 236 +Y A+ G + + ++L G +HR+ S+D SI+ ++ Y + + S Sbjct: 181 AGKAVVYLAERGRVTEVDGQTYLVLEKGSIHRQQKDSRDSSIVSYERYAVDLAAFTPPDS 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V K +++ LL P+ Y + + +E +RL+ W +P++ I+ Sbjct: 241 ETVYKPRERSTLALLFPDTREGYYVLQ-KGRFWAELDERLSAWFYPLVLAFIAFDRLGDP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY 335 RQ + + L + GF + + Sbjct: 300 RTTRQGRGMAVAGAVLGVVGLRIGGFDASSADVRKPGAV 338 >gi|86138693|ref|ZP_01057266.1| membrane protein, putative [Roseobacter sp. MED193] gi|85824753|gb|EAQ44955.1| membrane protein, putative [Roseobacter sp. MED193] Length = 387 Score = 157 bits (395), Expect = 3e-36, Method: Composition-based stats. Identities = 65/358 (18%), Positives = 128/358 (35%), Gaps = 5/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y+L F L +V + WV + + + + ++ + L+ + +P + Sbjct: 1 MSRFDRYVLSQYLLFFSFFALILVAVFWVNRAVVLFDRLIGDGQTAIVFLEFTALALPNL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + MV P V + +EL ++ TGTS + +P L ++ ++ + + + Sbjct: 61 IRMVLPVAVFASAVWVTNRLQSESELTVLRATGTSPWQMARPALAFGVITALMMSVLTHF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P S + + +T L E F + I + + N TL +F+ D RD Sbjct: 121 LLPSSISQLALREQEVSRNVTAKLLTEGHFLHPVKGVTFYIRQIDSNGTLNDVFLSDRRD 180 Query: 181 TQTHKIYYAQSGSIDLD--RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA--NSS 236 Y + D +I+ +G R ++ +S F ++ S S+ Sbjct: 181 PNQTMTYTGARAFLVRDGENTHLIMVNGMAQRLEHRTQQLSTTNFSDFSYDISSLANQST 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + + LL N EFH R + L V LI Sbjct: 241 AAIRNIREISSWELLQDRENISLTEGYSRGALAEEFHLRFARALICVAVALIGFSTLMLG 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + R ++ + V + + NP ++YL F +I + + Sbjct: 301 SYSRLG-VWRQALVAFLLLILVEGLRGVVSEPVRSNPDLWLLIYLPAFIGLAIAVGFL 357 >gi|260576761|ref|ZP_05844746.1| permease YjgP/YjgQ family protein [Rhodobacter sp. SW2] gi|259021013|gb|EEW24324.1| permease YjgP/YjgQ family protein [Rhodobacter sp. SW2] Length = 376 Score = 155 bits (392), Expect = 7e-36, Method: Composition-based stats. Identities = 70/367 (19%), Positives = 156/367 (42%), Gaps = 7/367 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y+L + F L +V + W+ + + + + +S + L+ S +P+V Sbjct: 1 MSRFDRYLLSQLLALFGFFSLVLVAVYWINRAVLLFDKLIGDGQSALVFLEFSLLTLPSV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V PF + T + + R++EL+++ TG S + L +PV ++++ + + ++ Sbjct: 61 IMLVLPFSAFVATVYGINRLTRDSELVVMQATGFSPLRLARPVAIFGLIVAAMMAVLLHV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ R+T+ Q + + L +L + F + + I + +P L+ +F+ D+R Sbjct: 121 LVPESRATLAQRTLEVSENLAARFLMDGQFMHPAKGITLYIREISPKGELRDVFLADTRS 180 Query: 181 TQTHKIYYAQSGSIDLDRQAI--ILNDGEVHRKSPISKDISIMKFKSYTLQTESAN--SS 236 +H Y A + ++ DG V + +S+ +F +T + Sbjct: 181 PTSHATYTASRALLVKGDSGPKLVMLDGMVQNLNNKEGRMSVTRFADFTYDLATLIAGPK 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + A+ + LL P+ E E + H RL Q + + LI A Sbjct: 241 VLKRNASALSTYDLLWPSAEILQETAETPEALWFQAHNRLAQPILGLAAALIGFSALLLG 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI--FLLMI 354 A R I +++++ V + ++ + P + P+ Y ++ LL + Sbjct: 301 AFSRFG-LWRQIAVAVALMITVQGIATTMLSLGLKQPEFWPLAYAAPLAGLAMAAGLLWL 359 Query: 355 KKKYTKI 361 ++ ++ Sbjct: 360 AQRPQRL 366 >gi|75675869|ref|YP_318290.1| permease YjgP/YjgQ [Nitrobacter winogradskyi Nb-255] gi|74420739|gb|ABA04938.1| permease YjgP/YjgQ [Nitrobacter winogradskyi Nb-255] Length = 390 Score = 155 bits (392), Expect = 7e-36, Method: Composition-based stats. Identities = 79/358 (22%), Positives = 167/358 (46%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M S + YI R SF++ + + + W+ Q L+ I+L++S +++ L I+ IP + Sbjct: 1 MGSIDKYIFRTTLASFVVVLVSLTGVIWITQALRGIDLMTSQGQTILTFLGITSLAIPVL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +++P + ++ L + ++E+++++ G S L +P L+ +++++ + Sbjct: 61 VLIISPIALMIAVSHTLHKLATDSEIIVMNAAGLSPFRLFRPFLYATVVVALLVAFIAAY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +KQ A+ + + L+ F +LD +L I+I + P L GIFI D R+ Sbjct: 121 LAPDGMRRLKQWDAEITADVLANVLQPGRFAQLDPNLTIRIRERQPGGQLAGIFIDDRRN 180 Query: 181 TQTHKIYYAQSGSIDLDRQ--AIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS-- 236 + A G++ + Q +IL DG + R ++ +++ F Y ++ Sbjct: 181 SNERLSIIADHGTVMKNDQGSFLILEDGHLERFETGKREPAMVAFDRYAFDMSKFSNRGH 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 +V ++ L L+ P+ +P + +L +R+E H R T ++P F ++ Sbjct: 241 DVVYGIRERYLWELIAPDEKDPLVQ-QLRGQFRAELHDRFTAPIYPFAFAALTFAFLGSP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RQ + + +++ FG+ + ++P + YL LF I L +I Sbjct: 300 RTTRQSRNFS-MGAAIAAVFGLRMAGFALSVMTVKSPMAALLQYLLLFGAIGISLRVI 356 >gi|86749600|ref|YP_486096.1| permease YjgP/YjgQ [Rhodopseudomonas palustris HaA2] gi|86572628|gb|ABD07185.1| permease YjgP/YjgQ [Rhodopseudomonas palustris HaA2] Length = 388 Score = 155 bits (391), Expect = 8e-36, Method: Composition-based stats. Identities = 74/360 (20%), Positives = 159/360 (44%), Gaps = 5/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M S + YI R SF + + + W+ Q L+ I+L++S +++ L ++G +P + Sbjct: 1 MGSIDSYIFRTTLTSFAVVMASLTGVIWITQALRGIDLMTSQGQTIVTFLGLTGLAVPVL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + + L + ++E+++++ G S + L +P ++ I ++ + + + Sbjct: 61 ILVIAPIALMIAVAHTLNRLATDSEIIVMNAAGLSPLRLFRPFVYATIFVAALVTLIGSY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P I + A+ + + L+ F +L+ +L I++ + L G+FI D RD Sbjct: 121 IAPDGLRRIARWDAEITADVLANVLQPGRFAQLEQNLTIRVRERQAGGLLVGVFIDDRRD 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN-SST 237 A G++ + D ++L DG + R ++ +++ F Y + + Sbjct: 181 PADRVSIIADHGTVLKNKDGSFLVLEDGHLERFQGGKQEPTLVAFSRYAFDMSKFSRARD 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + L L+ P+P +P +L +RSE H RL ++P F ++ Sbjct: 241 VAYGIREHYLWELIWPDPKDPLLA-QLPTQFRSEMHDRLLAPIYPFFFAAVTFAFLGMPR 299 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 RQ + I ++ +F V + PY + YL L + + +I++ Sbjct: 300 TTRQSRNFSMIG-AVLCAFVVRLAGFALSVVANHTPYIAGLQYLLLAVAIAASVWLIRRN 358 >gi|209548671|ref|YP_002280588.1| permease YjgP/YjgQ family protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534427|gb|ACI54362.1| permease YjgP/YjgQ family protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 393 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 128/343 (37%), Positives = 215/343 (62%), Gaps = 5/343 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YILR +G+ FL++ L ++ I W Q+LQRINLV+ S +S+ K++ ++P++ Sbjct: 1 MKLLETYILRRVGQMFLVALLPVLAIIWTTQVLQRINLVTDSGQSIGSFAKLATMILPSI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T LT+MN ++EL +ID G R LI+P+L LA ++S+F F +N+ Sbjct: 61 IPVVLPFALVIAITQTLTTMNNDSELTVIDAAGARRSVLIRPILLLAAVVSVFSFFVDNV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP+ ++ ++Q+ A+ L S +EE F +LD+ LY++ISK L+G+F+ D RD Sbjct: 121 VEPRAKTVVRQMIAETYADLLSSVIEEKTFRKLDEGLYVQISKRMAGRMLKGLFVADERD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE--SANSSTI 238 IYYA+ G++D +I+++GEVHRK+P ++S++ F SY+ + N Sbjct: 181 PAYELIYYAKEGAVDDTGTTLIMHEGEVHRKTPDG-NVSVINFDSYSFDLSDMTENRGQA 239 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 L+A+D++L FLLNP+P + +Y ++YR+E H+RLT W+ PV+F L S+ A Sbjct: 240 TLRASDRDLWFLLNPDPADKDYTIR-PQSYRAELHRRLTDWILPVVFALFSLAIAGDAR- 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL 341 + ++HP+ +L+ +F + W Y ++I+ +P YI +LY Sbjct: 298 SHREARLHPMVSALAYAFALRWAAFYAANQIDTDPEYIAVLYA 340 >gi|23501574|ref|NP_697701.1| hypothetical protein BR0687 [Brucella suis 1330] gi|254701470|ref|ZP_05163298.1| hypothetical protein Bsuib55_11511 [Brucella suis bv. 5 str. 513] gi|254704017|ref|ZP_05165845.1| hypothetical protein Bsuib36_08829 [Brucella suis bv. 3 str. 686] gi|256060812|ref|ZP_05450972.1| hypothetical protein Bneo5_10667 [Brucella neotomae 5K33] gi|261324804|ref|ZP_05964001.1| permease YjgP/YjgQ family protein [Brucella neotomae 5K33] gi|261752013|ref|ZP_05995722.1| permease YjgP/YjgQ family protein [Brucella suis bv. 5 str. 513] gi|261754672|ref|ZP_05998381.1| permease YjgP/YjgQ family protein [Brucella suis bv. 3 str. 686] gi|306845288|ref|ZP_07477864.1| permease YjgP/YjgQ family protein [Brucella sp. BO1] gi|23347487|gb|AAN29616.1| membrane protein, putative [Brucella suis 1330] gi|261300784|gb|EEY04281.1| permease YjgP/YjgQ family protein [Brucella neotomae 5K33] gi|261741766|gb|EEY29692.1| permease YjgP/YjgQ family protein [Brucella suis bv. 5 str. 513] gi|261744425|gb|EEY32351.1| permease YjgP/YjgQ family protein [Brucella suis bv. 3 str. 686] gi|306274447|gb|EFM56254.1| permease YjgP/YjgQ family protein [Brucella sp. BO1] Length = 402 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 114/364 (31%), Positives = 207/364 (56%), Gaps = 8/364 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYILR + F V I W +Q+LQRIN +++S ++ +++ S LIP+ Sbjct: 1 MRLIELYILRRVAIMFFAVLGAAVGITWTVQVLQRINFLTTSGQTFQTIVQFSSLLIPSA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T L++MN+++EL++I+ +G R +++P+L LA +S+ F+ N Sbjct: 61 IPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAATVSVTSFLIANY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R ++ + A A L ++E F +L D+LYI++++ + ++ G+FI DSRD Sbjct: 121 VEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQVAERRADGSIGGLFIADSRD 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--S 236 IYYA G+I +++ +GEV R++ +SI+KF SY S Sbjct: 181 PTLDLIYYAADGAIASTPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAGD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V+ A D+ L++LLNP+PN+P + L Y++E H+R TQW++P+IF +I++ A Sbjct: 241 DFVIFAKDRPLTYLLNPDPNDPMLQTRPLT-YKAELHRRFTQWIYPLIFAMIALAIAGDS 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI--FLLMI 354 + ++ F ++S + V+W + + +++P YI ++YL + + F+L+ Sbjct: 300 R-SHREARVSASFSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFILLT 358 Query: 355 KKKY 358 ++ Sbjct: 359 GRRL 362 >gi|116251335|ref|YP_767173.1| hypothetical protein RL1569 [Rhizobium leguminosarum bv. viciae 3841] gi|115255983|emb|CAK07064.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae 3841] Length = 393 Score = 155 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 126/356 (35%), Positives = 218/356 (61%), Gaps = 5/356 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YILR +G+ FL++ L ++ I W Q+LQRINLV+ S +S+ K++ ++P++ Sbjct: 1 MKLLETYILRRVGQMFLVALLPVLAIIWTTQVLQRINLVTDSGQSIGSFAKLATMILPSI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T LT+MN ++EL +ID G R LI+P+L LA ++S+F F +N+ Sbjct: 61 IPVVLPFALVIAITQTLTTMNNDSELTVIDAAGARRSVLIRPILLLAAVISVFSFFVDNV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP+ ++ ++Q+ A+ L S +EE F +LD+ LY++IS+ L+G+F+ D RD Sbjct: 121 VEPRAKTVVRQMIAETYADLLSSVIEEKTFRKLDEGLYVQISQRMAGRMLKGLFVADERD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE--SANSSTI 238 IYYA+ G++D +I++ GEVHRK+P ++S++ F SY+ + + Sbjct: 181 PAYELIYYAKEGAVDDTGTTLIMHQGEVHRKTPDG-NVSVINFDSYSFDLSDMTESRGQA 239 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 L+A+D++L FL NP+P + +Y ++YR+E H+RLT W+ PV+F L S+ A Sbjct: 240 TLRASDRDLWFLFNPDPADKDYTIR-PQSYRAELHRRLTDWILPVVFALFSLAIAGDAR- 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + ++HP+ +L+ +F + W Y ++I+ +P YI +LY S + ++ + Sbjct: 298 SHREARLHPMVSALAYAFAMRWAAFYAANQIDTDPEYIAVLYAIPIVSSIVSIVFL 353 >gi|256369122|ref|YP_003106630.1| permease YjgP/YjgQ family protein [Brucella microti CCM 4915] gi|255999282|gb|ACU47681.1| permease YjgP/YjgQ family protein [Brucella microti CCM 4915] Length = 402 Score = 155 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 114/364 (31%), Positives = 207/364 (56%), Gaps = 8/364 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYILR + F V I W +Q+LQRIN +++S ++ +++ S LIP+ Sbjct: 1 MRLIELYILRRVAIMFFAVLGAAVGITWTVQVLQRINFLTTSGQTFQTIVQFSSLLIPSA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T L++MN+++EL++I+ +G R +++P+L LA +S+ F+ N Sbjct: 61 IPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAATVSVTSFLIANY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R ++ + A A L ++E F +L D+LYI++++ + ++ G+FI DSRD Sbjct: 121 VEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQVAERRADGSIGGLFIADSRD 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--S 236 IYYA G+I +++ +GEV R++ +SI+KF SY S Sbjct: 181 PTLDLIYYAADGAIASTPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAGD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V+ A D+ L++LLNP+PN+P + L Y++E H+R TQW++P+IF +I++ A Sbjct: 241 DFVIFAKDRPLTYLLNPDPNDPMLQTRPLT-YKAELHRRFTQWIYPLIFTMIALAIAGDS 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI--FLLMI 354 + ++ F ++S + V+W + + +++P YI ++YL + + F+L+ Sbjct: 300 R-SHREARVSASFSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFILLT 358 Query: 355 KKKY 358 ++ Sbjct: 359 GRRL 362 >gi|83312813|ref|YP_423077.1| permease [Magnetospirillum magneticum AMB-1] gi|82947654|dbj|BAE52518.1| Predicted permease [Magnetospirillum magneticum AMB-1] Length = 368 Score = 155 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 62/358 (17%), Positives = 149/358 (41%), Gaps = 8/358 (2%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 ++R + + + + W+ Q L+ + ++ + S+ LK++ L+P L ++ P Sbjct: 1 MMRQMLVGMIFVSAALACVLWLTQSLRFVEMIVNKGLSIGAFLKLTILLMPGFLVVIIPI 60 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 + + EL+++ G S + L +P + L + +S ++ I P Sbjct: 61 SLFAVVLFTYNRLIADRELVVLRAAGLSHLALARPAVILGLAVSAVGYMLSCWIIPVTVR 120 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 + ++ + + L+E +F + + L I + PN L G+ + D R Q Sbjct: 121 SFHEMQWTIRNDIGNVLLQEGMFNKFGEGLTIYVRSRTPNGELTGLLVHDKRHAQRPVTL 180 Query: 188 YAQSGS--IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS--TIVLKAN 243 A+ G+ +++ +G +P + +S++ F +YT+ +A + V A Sbjct: 181 MAERGALVYTEQGPRVLMVNGNRQEVTPGTGKLSLLYFDNYTVDFNTATGAKHDRVRDAR 240 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 +++ LL ++ L ++SE H RLT L+ + F L++ R+ + Sbjct: 241 ERSTLELL--AIDSSMENKGELRRFKSELHSRLTSPLYSLGFPLLAAAVLLTSGFDRRGQ 298 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK-KYTK 360 + + ++ V + N ++P++Y+ ++ L ++ + + + Sbjct: 299 T-AQVITATALMVAVQALALGASNLSSGNLAFVPLIYINAALPIALGLWVLARPPWPR 355 >gi|254718823|ref|ZP_05180634.1| hypothetical protein Bru83_04675 [Brucella sp. 83/13] gi|265983808|ref|ZP_06096543.1| permease YjgP/YjgQ family protein [Brucella sp. 83/13] gi|306838745|ref|ZP_07471579.1| permease YjgP/YjgQ family protein [Brucella sp. NF 2653] gi|264662400|gb|EEZ32661.1| permease YjgP/YjgQ family protein [Brucella sp. 83/13] gi|306406147|gb|EFM62392.1| permease YjgP/YjgQ family protein [Brucella sp. NF 2653] Length = 402 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 114/363 (31%), Positives = 207/363 (57%), Gaps = 8/363 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYILR + F V I W +Q+LQRIN +++S ++ +++ S LIP+ Sbjct: 1 MRLIELYILRRVAIMFFAVLGAAVGITWTVQVLQRINFLTTSGQTFQTIVQFSSLLIPSA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T L++MN+++EL++I+ +G R +++P+L LA +S+ F+ N Sbjct: 61 IPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAATVSVTSFLIANY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R ++ + A A L ++E F +L D+LYI++++ + ++ G+FI DSRD Sbjct: 121 VEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQVAERRADGSIGGLFIADSRD 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--S 236 IYYA G+I +++ +GEV R++ +SI+KF SY S Sbjct: 181 PTLDLIYYAADGAIASTPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAGD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V+ A D+ L++LLNP+PN+P + L Y++E H+R TQW++P+IF +I++ A Sbjct: 241 DFVIFAKDRPLTYLLNPDPNDPMLQTRPLT-YKAELHRRFTQWIYPLIFAMIALAIAGDS 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI--FLLMI 354 + ++ F ++S + V+W + + +++P YI ++YL + + F+L+ Sbjct: 300 R-SHREARVSASFSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFILLT 358 Query: 355 KKK 357 ++ Sbjct: 359 GRR 361 >gi|296116656|ref|ZP_06835266.1| permease YjgP/YjgQ family protein [Gluconacetobacter hansenii ATCC 23769] gi|295976868|gb|EFG83636.1| permease YjgP/YjgQ family protein [Gluconacetobacter hansenii ATCC 23769] Length = 386 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 64/357 (17%), Positives = 155/357 (43%), Gaps = 6/357 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + Y+LR + + + + + + W+ Q L ++LV SL + ++++ LIP+ Sbjct: 15 LSILDRYVLRQLLLALVATTGALALLIWLTQSLHFVSLVVGRGLSLRVFVQLTSLLIPSF 74 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + + + + EL ++ G S + +P L A++ + + Sbjct: 75 VAVILPITTFVVVQFIYQRLGSDRELTVMQAAGLSPFMMARPALLCALVSVLACYALNLW 134 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +Q + + + +++ +F ++ D++ + I +P+ L GI + D R Sbjct: 135 VVPTAYHGFRQYEYQIRNKMAAFLIQDGVFTQVSDNMTVYIRARDPSGMLHGIMVEDDRQ 194 Query: 181 TQTHKIYYAQSGS--IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN-SST 237 A+ GS I D+ I+L +G + ++++ F+ T+ + + + T Sbjct: 195 PDAQATILAEEGSFVITNDQPRIVLFNGSRQEIDRKTGRLNMLSFERNTIDLSAPHGTQT 254 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 AN+ ++ LL+PN + P + E +RLT L F +I +++A Sbjct: 255 RQPDANELPITALLHPNLRQ--FSPRDEKKMIIEAWRRLTSPLCAFSFAMIGLLSALGGG 312 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R + P+ +L++ + + +N +P++++ + + M+ Sbjct: 313 FSRHGNIVRPVAATLAVVAVQALTLL-VQNLASRNLALMPLMWVSAVLPGMVCMAML 368 >gi|114766153|ref|ZP_01445157.1| Predicted permease [Pelagibaca bermudensis HTCC2601] gi|114541613|gb|EAU44655.1| Predicted permease [Roseovarius sp. HTCC2601] Length = 371 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 62/353 (17%), Positives = 126/353 (35%), Gaps = 5/353 (1%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 +L + F L +V + WV + + + + S I L+ S +P V+ +V P Sbjct: 1 MLSQLMVVFGFFALVLVMVYWVNASVSLFDELITDGHSARIFLEFSLLSLPGVIALVLPM 60 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 V M+ +E+ ++ G S L +PVL +L+++ + + + + P + Sbjct: 61 AAFGAAVYVTNRMSNESEMTVLQAGGLSPWRLGRPVLVFGVLIALMMSVLTHALVPASVA 120 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 ++ ++ ++ L E F + I + + L+ +++ D R+ Q Y Sbjct: 121 QLRDRESEISESVAARLLHEGTFLHPARGVTFYIREITDDGELRDVYLSDRRNDQRTVTY 180 Query: 188 YAQSGSIDLDRQAIIL--NDGEVHRKSPISKDISIMKFKSYTLQTESANSS--TIVLKAN 243 A++ + D L G +S F T +S + +A Sbjct: 181 TAETAYVTRDDGGPKLTMRSGLAQEVQTKDLTLSTTNFTDLTYDISGLITSGGSERRRAR 240 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 LL + + E H R L V+ LI A R Sbjct: 241 QIPTLELLTQTEAVAEEVNDSIGEVLEEAHNRFQMPLLCVVAALIGYAALMTGTFSRFG- 299 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 I ++ + V S I + P + P++YL ++ +++ + Sbjct: 300 VTKQIVGAIFLLVLVKLVESAITEPVRSTPAFWPLVYLPSLVGFALAAVLLWR 352 >gi|312113656|ref|YP_004011252.1| permease YjgP/YjgQ family protein [Rhodomicrobium vannielii ATCC 17100] gi|311218785|gb|ADP70153.1| permease YjgP/YjgQ family protein [Rhodomicrobium vannielii ATCC 17100] Length = 387 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 69/357 (19%), Positives = 163/357 (45%), Gaps = 6/357 (1%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 YI R + +M + + I W+ +L+ I L+++ ++ + L+I+ IP+++ Sbjct: 2 LISRYIFRQTASALIMILVSLTLIVWLTSLLREIKLLTAQGQTFLLFLQITALAIPSLIV 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 V P F + + L ++ ++EL+++ G+S L P LFLA+++S+ + + + Sbjct: 62 TVAPVAFLIAALHSLNRLSGDSELIVLSAAGSSVWRLFSPYLFLAVVVSMCVLTANLFVL 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + ++ + + ++ F L+ L + N L G+ + D RD + Sbjct: 122 PNAARLLGDTVSQVRADVLSQVIQPGEFSDLEPGLTFHMRAKGDNGELLGVVVRDERDPK 181 Query: 183 THKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS--TI 238 A+ G I D ++L+DG++ R+ ++ F SY ++ Sbjct: 182 AVTTVIAEQGQILQDGGRASMMLHDGQIIRQQAEKTAAQVVVFTSYAFDIGDFSAKKGPR 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 K ++++ LL P+ +P Y ++RSE H+R + L+P+ F +I+++ + Sbjct: 242 ERKPRERDIGELLFPDKESPAYTN-TKGSFRSEIHERFSGALYPIAFAIIAVLYLGRPKT 300 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 R+ + +F + ++ + ++ + + + + ++Y + L+M++ Sbjct: 301 TREGRTG-NLFTAFTLGAAIRIAGIAGVNIVGKKAWALGLIYGIPVAVIVAGLVMLR 356 >gi|254488881|ref|ZP_05102086.1| permease YjgP/YjgQ family protein [Roseobacter sp. GAI101] gi|214045750|gb|EEB86388.1| permease YjgP/YjgQ family protein [Roseobacter sp. GAI101] Length = 376 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 66/359 (18%), Positives = 134/359 (37%), Gaps = 5/359 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y+L F L +V I W+ + + + + ++ + L+ + +P + Sbjct: 1 MSKFDRYMLSQFLTLFSFFALVLVAIFWINRAVILFDRLIGDGQTALVFLEFTVLGLPRL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P V+ M +EL ++ TGT L +PV I +++ + + ++ Sbjct: 61 ITTVLPIATFAGAAYVINRMTSESELTVLQATGTGPWRLARPVFAYGICVALMMSVLTHV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P ++ + Q A+ +T L E F + + L+ +F+ D R+ Sbjct: 121 LVPMTKAELNQREAEISQNVTARLLTEGTFLHPTSKVTFYTRLIGNDGVLRDVFLSDRRN 180 Query: 181 TQTHKIYYAQSGSIDLDRQAI--ILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 IY A + + I+ DG R K ++ KF+ ++ + +NS+ Sbjct: 181 PDEGVIYTAAEAYLVRNGNGTTLIMVDGLAQRLQVEGKQLATAKFRDFSFDISALVSNST 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + LL + + E + R LF +I +I Sbjct: 241 DESQSIDSMVTFDLLKNWDDLAAKTGQTHGDIAEEVNARFADPLFCIIAAMIGYATLIMG 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 R I I+ + + S ++ + Q+ P+LY+ + + L MI Sbjct: 301 GFSRFG-VWREIVIAFGLLIAIDGFSSTLVETVRQDASRWPVLYVPSLVGAMLVLAMIW 358 >gi|163842957|ref|YP_001627361.1| permease YjgP/YjgQ family protein [Brucella suis ATCC 23445] gi|163673680|gb|ABY37791.1| permease YjgP/YjgQ family protein [Brucella suis ATCC 23445] Length = 402 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 113/364 (31%), Positives = 207/364 (56%), Gaps = 8/364 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYILR + F V I W +++LQRIN +++S ++ +++ S LIP+ Sbjct: 1 MRLIELYILRRVAIMFFAVLGAAVGITWTVRVLQRINFLTTSGQTFQTIVQFSSLLIPSA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T L++MN+++EL++I+ +G R +++P+L LA +S+ F+ N Sbjct: 61 IPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAATVSVTSFLIANY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R ++ + A A L ++E F +L D+LYI++++ + ++ G+FI DSRD Sbjct: 121 VEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQVAERRADGSIGGLFIADSRD 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--S 236 IYYA G+I +++ +GEV R++ +SI+KF SY S Sbjct: 181 PTLDLIYYAADGAIASTPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAGD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V+ A D+ L++LLNP+PN+P + L Y++E H+R TQW++P+IF +I++ A Sbjct: 241 DFVIFAKDRPLTYLLNPDPNDPMLQTRPLT-YKAELHRRFTQWIYPLIFAMIALAIAGDS 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI--FLLMI 354 + ++ F ++S + V+W + + +++P YI ++YL + + F+L+ Sbjct: 300 R-SHREARVSASFSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFILLT 358 Query: 355 KKKY 358 ++ Sbjct: 359 GRRL 362 >gi|161618656|ref|YP_001592543.1| permease YjgP/YjgQ family protein [Brucella canis ATCC 23365] gi|260566734|ref|ZP_05837204.1| permease YjgP/YjgQ family protein [Brucella suis bv. 4 str. 40] gi|161335467|gb|ABX61772.1| permease YjgP/YjgQ family protein [Brucella canis ATCC 23365] gi|260156252|gb|EEW91332.1| permease YjgP/YjgQ family protein [Brucella suis bv. 4 str. 40] Length = 402 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 114/364 (31%), Positives = 207/364 (56%), Gaps = 8/364 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYILR + F V I W +Q+LQRIN +++S ++ +++ S LIP+ Sbjct: 1 MRLIELYILRRVAIMFFAVLGAAVGITWTVQVLQRINFLTTSGQTFQTIVQFSSLLIPSA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T L++MN+++EL++I+ +G R +++P+L LA +S+ F+ N Sbjct: 61 IPLVMPFVLIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAATVSVTSFLIANY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R ++ + A A L ++E F +L D+LYI++++ + ++ G+FI DSRD Sbjct: 121 VEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQVAERRADGSIGGLFIADSRD 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--S 236 IYYA G+I +++ +GEV R++ +SI+KF SY S Sbjct: 181 PTLDLIYYAADGAIASTPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAGD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V+ A D+ L++LLNP+PN+P + L Y++E H+R TQW++P+IF +I++ A Sbjct: 241 DFVIFAKDRPLTYLLNPDPNDPMLQTRPLT-YKAELHRRFTQWIYPLIFAMIALAIAGDS 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI--FLLMI 354 + ++ F ++S + V+W + + +++P YI ++YL + + F+L+ Sbjct: 300 R-SHREARVSASFSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFILLT 358 Query: 355 KKKY 358 ++ Sbjct: 359 GRRL 362 >gi|119383653|ref|YP_914709.1| permease YjgP/YjgQ family protein [Paracoccus denitrificans PD1222] gi|119373420|gb|ABL69013.1| permease YjgP/YjgQ family protein [Paracoccus denitrificans PD1222] Length = 382 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 54/369 (14%), Positives = 136/369 (36%), Gaps = 9/369 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YIL F L +V + W+ + + + S ++ ++L+ + +P V Sbjct: 1 MPRIDRYILSQFMTLFGFFALVLVSVYWINRAVSLFEQLISDGQTALVVLEFTALTLPLV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V P + ++ +EL+ + TG S + +PVL +L+++ + + + Sbjct: 61 ISVVLPIAAFAASAYGTNRLSSESELVAMQATGMSPWRMARPVLVFGVLVALMVALLVHA 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P R + A+ +T +L F + + I + L F+ D+R+ Sbjct: 121 VVPMARGRLADRQAEIAQNVTAQFLRAGAFQYPVRGVTLYIRDIAADGRLVDFFLEDARN 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKS----PISKDISIMKFKSYTLQTES--AN 234 + Y + + + L + ++ + +S+ +F + Sbjct: 181 PDSQTTYTSTEALLVRTDEGPRLVMMQGMVQNLRHAGNRQSLSVTRFSELAYDLGTLIDT 240 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + + LL+P+P + +E H+RL + + L+ Sbjct: 241 GESRKRDLRAYSTLRLLDPDPELLAATGATRDRALAEAHERLAKPFQAPVAALLGFGMLL 300 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF--LL 352 R + ++ V + + +++ N P++Y+ ++I +L Sbjct: 301 LGGFSRFG-VWRQVVWAVVALIVVQFLSTAAENQVAGNASRWPLIYVSPLVGAAICCAVL 359 Query: 353 MIKKKYTKI 361 + + ++ Sbjct: 360 WLAARPRRL 368 >gi|254713812|ref|ZP_05175623.1| hypothetical protein BcetM6_10745 [Brucella ceti M644/93/1] gi|254717130|ref|ZP_05178941.1| hypothetical protein BcetM_12054 [Brucella ceti M13/05/1] gi|261218945|ref|ZP_05933226.1| permease YjgP/YjgQ family protein [Brucella ceti M13/05/1] gi|261321556|ref|ZP_05960753.1| permease YjgP/YjgQ family protein [Brucella ceti M644/93/1] gi|260924034|gb|EEX90602.1| permease YjgP/YjgQ family protein [Brucella ceti M13/05/1] gi|261294246|gb|EEX97742.1| permease YjgP/YjgQ family protein [Brucella ceti M644/93/1] Length = 402 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 113/364 (31%), Positives = 205/364 (56%), Gaps = 8/364 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYILR + F V I W +Q+LQRIN +++S ++ +++ S LIP+ Sbjct: 1 MRLIELYILRRVAIMFFAVLGAAVGITWTVQVLQRINFLTTSGQTFQTIVQFSSLLIPSA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T L++MN+++EL++I+ +G R ++P+L LA +S+ F+ N Sbjct: 61 IPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAAMRPILILAATVSVTSFLIANY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R ++ + A A L ++E F +L D+LYI++++ + ++ G+FI DSRD Sbjct: 121 VEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQVAERRADGSIGGLFIADSRD 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--S 236 IYYA G+I +++ +GEV R++ +SI+KF SY S Sbjct: 181 PTLDLIYYAADGAIASTPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAGD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V+ A D+ L++LLNP+ N+P + L Y++E H+R TQW++P+IF +I++ A Sbjct: 241 DFVIFAKDRPLTYLLNPDSNDPMLQTRPLT-YKAELHRRFTQWIYPLIFAMIALAIAGDS 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI--FLLMI 354 + ++ F ++S + V+W + + +++P YI ++YL + + F+L+ Sbjct: 300 R-SHREARVSASFSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFILLT 358 Query: 355 KKKY 358 ++ Sbjct: 359 GRRL 362 >gi|148559016|ref|YP_001258669.1| hypothetical protein BOV_0679 [Brucella ovis ATCC 25840] gi|254707609|ref|ZP_05169437.1| hypothetical protein BpinM_11726 [Brucella pinnipedialis M163/99/10] gi|254709808|ref|ZP_05171619.1| hypothetical protein BpinB_05961 [Brucella pinnipedialis B2/94] gi|256031299|ref|ZP_05444913.1| hypothetical protein BpinM2_11718 [Brucella pinnipedialis M292/94/1] gi|256159413|ref|ZP_05457191.1| hypothetical protein BcetM4_10693 [Brucella ceti M490/95/1] gi|256254707|ref|ZP_05460243.1| hypothetical protein BcetB_10510 [Brucella ceti B1/94] gi|261221887|ref|ZP_05936168.1| permease YjgP/YjgQ family protein [Brucella ceti B1/94] gi|261315099|ref|ZP_05954296.1| permease YjgP/YjgQ family protein [Brucella pinnipedialis M163/99/10] gi|261317346|ref|ZP_05956543.1| permease YjgP/YjgQ family protein [Brucella pinnipedialis B2/94] gi|265988384|ref|ZP_06100941.1| permease YjgP/YjgQ family protein [Brucella pinnipedialis M292/94/1] gi|265997850|ref|ZP_06110407.1| permease YjgP/YjgQ family protein [Brucella ceti M490/95/1] gi|148370273|gb|ABQ60252.1| putative membrane protein [Brucella ovis ATCC 25840] gi|260920471|gb|EEX87124.1| permease YjgP/YjgQ family protein [Brucella ceti B1/94] gi|261296569|gb|EEY00066.1| permease YjgP/YjgQ family protein [Brucella pinnipedialis B2/94] gi|261304125|gb|EEY07622.1| permease YjgP/YjgQ family protein [Brucella pinnipedialis M163/99/10] gi|262552318|gb|EEZ08308.1| permease YjgP/YjgQ family protein [Brucella ceti M490/95/1] gi|264660581|gb|EEZ30842.1| permease YjgP/YjgQ family protein [Brucella pinnipedialis M292/94/1] Length = 402 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 113/364 (31%), Positives = 206/364 (56%), Gaps = 8/364 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYILR + F V I W +Q+LQRIN +++S ++ +++ S LIP+ Sbjct: 1 MRLIELYILRRVAIMFFAVLGAAVGITWTVQVLQRINFLTTSGQTFQTIVQFSSLLIPSA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T L++MN+++EL++I+ +G R +++P+L LA +S+ F+ N Sbjct: 61 IPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAATVSVTSFLIANY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R ++ + A A L ++E F +L D+LYI++++ + ++ G+FI DSRD Sbjct: 121 VEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQVAERRADGSIGGLFIADSRD 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--S 236 IYYA G+I +++ +GEV R++ +SI+KF SY S Sbjct: 181 PTLDLIYYAADGAIASTPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAGD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V+ A D+ L++LLNP+ N+P + L Y++E H+R TQW++P+IF +I++ A Sbjct: 241 DFVIFAKDRPLTYLLNPDSNDPMLQTRPLT-YKAELHRRFTQWIYPLIFAMIALAIAGDS 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI--FLLMI 354 + ++ F ++S + V+W + + +++P YI ++YL + + F+L+ Sbjct: 300 R-SHREARVSASFSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFILLT 358 Query: 355 KKKY 358 ++ Sbjct: 359 GRRL 362 >gi|294852049|ref|ZP_06792722.1| hypothetical protein BAZG_00965 [Brucella sp. NVSL 07-0026] gi|294820638|gb|EFG37637.1| hypothetical protein BAZG_00965 [Brucella sp. NVSL 07-0026] Length = 402 Score = 154 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 113/364 (31%), Positives = 206/364 (56%), Gaps = 8/364 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYILR + F V I W +Q+LQRIN +++S ++ +++ S LIP+ Sbjct: 1 MRLIELYILRRVAIMFFAVLGAAVGITWTVQVLQRINFLTTSGQTFQTIVQFSSLLIPSA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T L++MN+++EL++I+ +G R +++P+L LA +S+ F+ N Sbjct: 61 IPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAATVSVTSFLIANY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R ++ + A A L ++E F +L D+LYI++++ + ++ G+FI DSRD Sbjct: 121 VEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQVAERRADGSIGGLFIADSRD 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--S 236 IYYA G+I +++ +GEV R++ +SI+KF SY S Sbjct: 181 PTLDLIYYAADGAIASMPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAGD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V+ A D+ L++LLNP+ N+P + L Y++E H+R TQW++P+IF +I++ A Sbjct: 241 DFVIFAKDRPLTYLLNPDSNDPMLQTRPLT-YKAELHRRFTQWIYPLIFAMIALAIAGDS 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI--FLLMI 354 + ++ F ++S + V+W + + +++P YI ++YL + + F+L+ Sbjct: 300 R-SHREARVSASFSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFILLT 358 Query: 355 KKKY 358 ++ Sbjct: 359 GRRL 362 >gi|62289649|ref|YP_221442.1| hypothetical protein BruAb1_0706 [Brucella abortus bv. 1 str. 9-941] gi|82699577|ref|YP_414151.1| YjgP/YjgQ permease [Brucella melitensis biovar Abortus 2308] gi|189023899|ref|YP_001934667.1| permease [Brucella abortus S19] gi|237815139|ref|ZP_04594137.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] gi|254688959|ref|ZP_05152213.1| Predicted permease YjgP/YjgQ family protein [Brucella abortus bv. 6 str. 870] gi|254697093|ref|ZP_05158921.1| Predicted permease YjgP/YjgQ family protein [Brucella abortus bv. 2 str. 86/8/59] gi|254729989|ref|ZP_05188567.1| Predicted permease YjgP/YjgQ family protein [Brucella abortus bv. 4 str. 292] gi|256257207|ref|ZP_05462743.1| Predicted permease YjgP/YjgQ family protein [Brucella abortus bv. 9 str. C68] gi|260545599|ref|ZP_05821340.1| permease YjgP/YjgQ family protein [Brucella abortus NCTC 8038] gi|260754448|ref|ZP_05866796.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 6 str. 870] gi|260757667|ref|ZP_05870015.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 4 str. 292] gi|260761494|ref|ZP_05873837.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 2 str. 86/8/59] gi|260883477|ref|ZP_05895091.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 9 str. C68] gi|297248057|ref|ZP_06931775.1| YjgP/YjgQ family permease [Brucella abortus bv. 5 str. B3196] gi|62195781|gb|AAX74081.1| hypothetical membrane protein [Brucella abortus bv. 1 str. 9-941] gi|82615678|emb|CAJ10665.1| Predicted permease YjgP/YjgQ family [Brucella melitensis biovar Abortus 2308] gi|189019471|gb|ACD72193.1| Predicted permease YjgP/YjgQ family [Brucella abortus S19] gi|237789976|gb|EEP64186.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] gi|260097006|gb|EEW80881.1| permease YjgP/YjgQ family protein [Brucella abortus NCTC 8038] gi|260667985|gb|EEX54925.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 4 str. 292] gi|260671926|gb|EEX58747.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 2 str. 86/8/59] gi|260674556|gb|EEX61377.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 6 str. 870] gi|260873005|gb|EEX80074.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 9 str. C68] gi|297175226|gb|EFH34573.1| YjgP/YjgQ family permease [Brucella abortus bv. 5 str. B3196] Length = 402 Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats. Identities = 113/364 (31%), Positives = 206/364 (56%), Gaps = 8/364 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYILR + F V I W +Q+LQRIN +++S ++ +++ S LIP+ Sbjct: 1 MRLIELYILRRVAIMFFAVLGAAVGITWAVQVLQRINFLTTSGQTFQTIVQFSSLLIPSA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T L++MN+++EL++I+ +G R +++P+L LA +S+ F+ N Sbjct: 61 IPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAATVSVTSFLIANY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R ++ + A A L ++E F +L D+LYI++++ + ++ G+FI DSRD Sbjct: 121 VEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQVAERRADGSIGGLFIADSRD 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--S 236 IYYA G+I +++ +GEV R++ +SI+KF SY S Sbjct: 181 PTLDLIYYAADGAIASTPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAGD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V+ A D+ L++LLNP+ N+P + L Y++E H+R TQW++P+IF +I++ A Sbjct: 241 DFVIFAKDRPLTYLLNPDSNDPMLQTRPLT-YKAELHRRFTQWIYPLIFAMIALAIAGDS 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI--FLLMI 354 + ++ F ++S + V+W + + +++P YI ++YL + + F+L+ Sbjct: 300 R-SHREARVSASFSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFILLT 358 Query: 355 KKKY 358 ++ Sbjct: 359 GRRL 362 >gi|13476526|ref|NP_108096.1| hypothetical protein mll7866 [Mesorhizobium loti MAFF303099] gi|14027287|dbj|BAB54241.1| mll7866 [Mesorhizobium loti MAFF303099] Length = 400 Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 107/358 (29%), Positives = 209/358 (58%), Gaps = 7/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R FL + ++ + I W Q+L +I+LV+ S +S +++ ++P++ Sbjct: 1 MKVVERYIMRRAFVVFLAALVWTLAIVWTTQVLAKIDLVTDSGQSSLTFFEVAALILPSI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + L+ MN ++EL++++ G SR T+++P++ LA+ S+F F +N Sbjct: 61 IPIVVPFALVVAVAQTLSVMNSDSELVVVNAAGASRWTIVRPIMLLALAASVFSFAVDNG 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I+P R + L A+++ L ++E F +++D L+++I + P+N L GIF+ DSR+ Sbjct: 121 IDPYARQKNRALVAQSRADLLSLIIQEGTFRKIEDGLFLQIGERLPDNRLGGIFVADSRE 180 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 + +YYA++GS+ + +++NDG +HRK+ ++ D+S+++F SY + A +S Sbjct: 181 EGVNLVYYAKTGSVVERGGEKVLMMNDGVIHRKT-LTGDLSVIRFTSYAFDMSAFMAAAS 239 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L DQ +LLNPN N+ Y+ + + YR+E +R ++WL+ ++F LI++ A Sbjct: 240 EVTLLPKDQTTQYLLNPNVNDKLYQ-QAPQQYRAEIDQRFSEWLYSMVFALIALAVAGDA 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + +++P+ +++IS V W + K ++ P Y ++Y S++ + I Sbjct: 299 R-SHREARVNPLITAITISLFVRWLGFFAASKADEVPQYAYMVYGVPIVASAVAIWFI 355 >gi|144897578|emb|CAM74442.1| conserved hypothetical protein, membrane [Magnetospirillum gryphiswaldense MSR-1] Length = 373 Score = 153 bits (385), Expect = 4e-35, Method: Composition-based stats. Identities = 68/358 (18%), Positives = 145/358 (40%), Gaps = 7/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y LR + L + + W+ Q L+ I ++ + S+ LK++G L+P+ Sbjct: 1 MTGITRYFLRQLAVGMLFVSAALTCVLWLTQSLRLIEMIVNQGISVTTFLKLTGMLMPSF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P +N + EL+++ G S L KP L LA + +I ++ Sbjct: 61 LVVIIPIALFAVILFTYNKLNTDRELVVLRAAGLSNWALAKPALILAGIATIMGYVLSVW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P+ +++ + ++ L+E F + + I + L G+ + D R Sbjct: 121 IIPQTVQNFREVQWSIRNDISNLLLQEGTFNKFGKGVTIYVRTRTSEGELLGLLVHDKRS 180 Query: 181 TQTHKIYYAQSGS--IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA--NSS 236 A+ G+ I++ +G + + +S++ F SYT+ + ++ Sbjct: 181 PTKPVTLMAEKGALVFTETGPRILMVNGNRQQLPDGTGQLSVLNFDSYTVDLSMSGGDNG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + A + +++ LLN + + E H+RLT L+ + + LI++ Sbjct: 241 SRFRDARELSMAELLNADEAQMGVT--DYRRAKGELHQRLTSPLYSLGYTLIALATLLTA 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R+ + + I ++ + GV + + P ++P LY+ + + Sbjct: 299 GFDRRGQTVT-ILTAIGLMVGVQAAVLGLANLSASKPIFLPFLYVLAVLPLVLGPWWL 355 >gi|254693441|ref|ZP_05155269.1| Predicted permease YjgP/YjgQ family protein [Brucella abortus bv. 3 str. Tulya] gi|261213694|ref|ZP_05927975.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 3 str. Tulya] gi|260915301|gb|EEX82162.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 3 str. Tulya] Length = 402 Score = 153 bits (385), Expect = 5e-35, Method: Composition-based stats. Identities = 113/364 (31%), Positives = 206/364 (56%), Gaps = 8/364 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYILR + F V I W +Q+LQRIN +++S ++ +++ S LIP+ Sbjct: 1 MRLIELYILRRVAFMFFAVLGAAVGITWAVQVLQRINFLTTSGQTFQTIVQFSSLLIPSA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T L++MN+++EL++I+ +G R +++P+L LA +S+ F+ N Sbjct: 61 IPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAATVSVTSFLIANY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R ++ + A A L ++E F +L D+LYI++++ + ++ G+FI DSRD Sbjct: 121 VEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQVAERRADGSIGGLFIADSRD 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--S 236 IYYA G+I +++ +GEV R++ +SI+KF SY S Sbjct: 181 PTLDLIYYAADGAIASTPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAGD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V+ A D+ L++LLNP+ N+P + L Y++E H+R TQW++P+IF +I++ A Sbjct: 241 DFVIFAKDRPLTYLLNPDSNDPMLQTRPLT-YKAELHRRFTQWIYPLIFAMIALAIAGDS 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI--FLLMI 354 + ++ F ++S + V+W + + +++P YI ++YL + + F+L+ Sbjct: 300 R-SHREARVSASFSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFILLT 358 Query: 355 KKKY 358 ++ Sbjct: 359 GRRL 362 >gi|17987545|ref|NP_540179.1| hypothetical protein BMEI1262 [Brucella melitensis bv. 1 str. 16M] gi|225852207|ref|YP_002732440.1| permease YjgP/YjgQ family protein [Brucella melitensis ATCC 23457] gi|256044380|ref|ZP_05447284.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 1 str. Rev.1] gi|256113223|ref|ZP_05454091.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 3 str. Ether] gi|256264285|ref|ZP_05466817.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 2 str. 63/9] gi|260563732|ref|ZP_05834218.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 1 str. 16M] gi|265990798|ref|ZP_06103355.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 1 str. Rev.1] gi|265994634|ref|ZP_06107191.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 3 str. Ether] gi|17983248|gb|AAL52443.1| hypothetical membrane spanning protein [Brucella melitensis bv. 1 str. 16M] gi|225640572|gb|ACO00486.1| permease YjgP/YjgQ family protein [Brucella melitensis ATCC 23457] gi|260153748|gb|EEW88840.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 1 str. 16M] gi|262765747|gb|EEZ11536.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 3 str. Ether] gi|263001582|gb|EEZ14157.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 1 str. Rev.1] gi|263094545|gb|EEZ18354.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 2 str. 63/9] Length = 402 Score = 152 bits (383), Expect = 9e-35, Method: Composition-based stats. Identities = 113/364 (31%), Positives = 205/364 (56%), Gaps = 8/364 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYILR + F V I W +Q+LQRIN +++S ++ +++ S LIP+ Sbjct: 1 MRLIELYILRRVAIMFFAVLGAAVGITWTVQVLQRINFLTTSGQTFQTIVQFSSLLIPSA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T L++MN+++EL++I+ +G R +++P+L LA +S+ F+ N Sbjct: 61 IPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAATVSVTSFLIANY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R ++ + A A L ++E F +L D+LYI+I++ + ++ G+FI DS D Sbjct: 121 VEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQIAERRADGSIGGLFIADSCD 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--S 236 IYYA G+I +++ +GEV R++ +SI+KF SY S Sbjct: 181 PTLDLIYYAADGAIASTPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAGD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V+ A D+ L++LLNP+ N+P + L Y++E H+R TQW++P+IF +I++ A Sbjct: 241 DFVIFAKDRPLTYLLNPDSNDPMLQTRPLT-YKAELHRRFTQWIYPLIFAMIALAIAGDS 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI--FLLMI 354 + ++ F ++S + V+W + + +++P YI ++YL + + F+L+ Sbjct: 300 R-SHREARVSASFSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFILLT 358 Query: 355 KKKY 358 ++ Sbjct: 359 GRRL 362 >gi|225627184|ref|ZP_03785222.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] gi|260168438|ref|ZP_05755249.1| hypothetical protein BruF5_08728 [Brucella sp. F5/99] gi|261757900|ref|ZP_06001609.1| permease YjgP/YjgQ family protein [Brucella sp. F5/99] gi|225618019|gb|EEH15063.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] gi|261737884|gb|EEY25880.1| permease YjgP/YjgQ family protein [Brucella sp. F5/99] Length = 402 Score = 152 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 113/364 (31%), Positives = 206/364 (56%), Gaps = 8/364 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYILR + F V I W +Q+LQRIN +++S ++ +++ S LIP+ Sbjct: 1 MRLIELYILRRVAIMFFAVLGAAVGITWTVQVLQRINFLTTSGQTFQTIVQFSSLLIPSA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T L++MN+++EL++I+ +G R +++P+L LA +S+ F+ N Sbjct: 61 IPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAATVSVTSFLIANY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP R ++ + A A L ++E F +L D+LYI++++ + ++ G+FI DSRD Sbjct: 121 VEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQVAERRADGSIGGLFIADSRD 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--S 236 IYYA G+I +++ +GEV R++ +SI+KF SY S Sbjct: 181 PTLDLIYYAADGAIASTPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAGD 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V+ A D+ L++LLNP+ N+P + L Y++E H+R TQW++P+IF +I++ A Sbjct: 241 DFVIFAKDRPLTYLLNPDSNDPMLQTRPLT-YKAELHRRFTQWIYPLIFAMIALAIAGDF 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI--FLLMI 354 + ++ F ++S + V+W + + +++P YI ++YL + + F+L+ Sbjct: 300 R-SHREARVSASFSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFILLT 358 Query: 355 KKKY 358 ++ Sbjct: 359 GRRL 362 >gi|254473376|ref|ZP_05086773.1| permease YjgP/YjgQ [Pseudovibrio sp. JE062] gi|211957492|gb|EEA92695.1| permease YjgP/YjgQ [Pseudovibrio sp. JE062] Length = 415 Score = 152 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 80/344 (23%), Positives = 177/344 (51%), Gaps = 6/344 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ E YI+R +F+++ + + W Q L++++LV+S ++L I+ +P + Sbjct: 19 MKTIERYIIRRSFTAFIVTLAAMTGVVWSTQALRQLDLVTSKGQTLLQFGYITALALPFL 78 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V PF + VL SM+R++EL++I+ +G S+ +++P++ ++ ++ ++ Sbjct: 79 ILIVAPFAMMLAFIIVLNSMSRDSELIVINASGASKWLVLRPIMTFSLCVTALMYFLSIY 138 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + ++ + ++ L + ++ F ++++L I + + L+G+ + D+RD Sbjct: 139 LSPTGLAELRSELTRVRVDLVANIIKPGRFIPIEENLTFHIRNRSGDGVLEGLLLDDARD 198 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 +T Y A++G I D+ +++ DG + R+ +D+SI+ F+SY S + Sbjct: 199 PETSFTYTAETGRIIEAADKTLLVMLDGTIQRRPKGGQDMSIVSFESYGFDLSSMIPEAR 258 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 KA+++ LL+ +P++ +Y + + EFH RL+ L+P+ FGLI Sbjct: 259 EPTFKASERPTFDLLSASPDD-SYAAKHWDKLIVEFHDRLSVPLYPIAFGLIIYAFLGSP 317 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY 340 RQ + + I +++++ + + P P+LY Sbjct: 318 KTTRQDQGLA-ITTTIAVATLLRTAGFGATLIVSSAPDMFPLLY 360 >gi|325292487|ref|YP_004278351.1| permease protein [Agrobacterium sp. H13-3] gi|325060340|gb|ADY64031.1| putative permease protein [Agrobacterium sp. H13-3] Length = 389 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 128/368 (34%), Positives = 208/368 (56%), Gaps = 11/368 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YILR + FL++ L ++ I W IQ+LQRINLV+ + +S+ + ++ ++PT+ Sbjct: 1 MKLLENYILRRTTQMFLVALLPVLAIIWTIQVLQRINLVTDTGQSMGSFMALATMILPTL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T T+MN ++EL IID G+SR + +PV+ LA +LS F N Sbjct: 61 IPVVLPFALVIGITQTFTAMNNDSELAIIDAAGSSRSVMFRPVIILAAVLSALSFTITNF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 IEP R++ +Q+ A A L S +EE F + D LY++I++ +G+F+ D RD Sbjct: 121 IEPPARNSARQMVAAAYADLLSSVIEEKTFRAVQDGLYVQIAQRQGRIL-KGLFVADRRD 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES---ANSST 237 IYYA+ G ID ++ + DGEV +K+P +SI+KF SY + +S Sbjct: 180 PNFDLIYYAKEGMIDESGTSLTMRDGEVQQKTPDG-KVSIVKFLSYAFDLSTMSEKQTSE 238 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 L D +L FLL+P+ NN +Y+ E++RSE HKRL+ W+F F LIS+V A Sbjct: 239 PSLSPGDASLGFLLSPDENNASYK-RSPESFRSELHKRLSDWMFAFAFALISLVIAADAR 297 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI--- 354 + ++HP+ +L +F + W Y+ ++++Q+ +IP++Y + ++ Sbjct: 298 -SHREARMHPMVAALVTAFMLRWLGFYVTNQVKQSAAFIPLVYAVPGLSGAAAAFILITG 356 Query: 355 -KKKYTKI 361 K + KI Sbjct: 357 RKPRMPKI 364 >gi|260432791|ref|ZP_05786762.1| permease YjgP/YjgQ [Silicibacter lacuscaerulensis ITI-1157] gi|260416619|gb|EEX09878.1| permease YjgP/YjgQ [Silicibacter lacuscaerulensis ITI-1157] Length = 379 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 60/358 (16%), Positives = 129/358 (36%), Gaps = 5/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y LR + F L +V + W+ + + V S +S + L+ + +PT+ Sbjct: 1 MSRFDGYFLRQLLVLFGFFTLVLVGVFWITRSVSLFERVISGGQSAMVFLEFTALTLPTL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P ++R +E+ ++ TG+S L + V+ ++ + + + + Sbjct: 61 IRTVMPMAVFAAAVYATNRLSRESEMTVMLATGSSPWRLSRGVILFGLIAGLMMAVISVV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +++ A+ +T L E F + + I + + + TL +F+ D RD Sbjct: 121 LRPASVEQLERRQAEVAGDVTAQLLNEGEFMHPAPGVTVYIGRIDLDGTLNEVFVSDRRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQ--AIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 Y + S + D +++ DG R +S +F+ + Sbjct: 181 RNNPATYSSTSAYLLSDDTGVHLVMVDGVALRLDREGNTLSSTQFQDASYDVSELTRKGD 240 Query: 239 VLK--ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + S LL E H+R + V ++ Sbjct: 241 IGRRSIEAVPTSELLRDLDAVAASDGYPRGELVEELHQRFSWIAICVAVAMVGYATLMLG 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + R IF + +I + ++ + ++ P+LY I + + Sbjct: 301 SFSRFG-LWPQIFAAFTILVLLEGVRGFVSPIVIKDARLWPVLYGPALLGIVISCVFL 357 >gi|254460553|ref|ZP_05073969.1| permease YjgP/YjgQ family protein [Rhodobacterales bacterium HTCC2083] gi|206677142|gb|EDZ41629.1| permease YjgP/YjgQ family protein [Rhodobacteraceae bacterium HTCC2083] Length = 381 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 62/363 (17%), Positives = 133/363 (36%), Gaps = 6/363 (1%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ Y+L + F L +V + W+ + + + + + + ++ L+ + +P V+ Sbjct: 7 RFDRYVLSQLFVLFGFFSLVLVSVYWINRAVILFDRLIADGQPASVFLEFTALSLPNVIR 66 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 MV P + V + +EL+++ TG S L +PV+ ++ F+ + + Sbjct: 67 MVLPMSAFAASVYVTNRLASESELVVMQATGYSPWRLARPVVMFGFIVGTFMMVLTQYLV 126 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ + +L+ L E F + I + P L+ +F+ D R+ Sbjct: 127 PSSLEQLRFRENEITGSLSSQLLREGEFMNPTKGVTFYIREITPEGVLKDVFLSDRRNEG 186 Query: 183 THKIYYAQSGSIDLD--RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSSTI 238 Y + G + + +++ G H + ++ ++ KF ++ S N + Sbjct: 187 RTTTYSSVDGFLVNEPTGPKLVMVSGVTHTLNEDTRKLTKTKFTDFSYSISSLIDNPGSF 246 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 N LL + E H R Q + V+ LI Sbjct: 247 YKSLNQYQTLELLLATDVVQKRSGQSTGRILEEAHSRFNQPILCVVAALIGFSTLLLGGF 306 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-FLFCISSIFLLMIKKK 357 R I ++ + V S + I N P++Y +F ++F ++ Sbjct: 307 SRFG-VGRQIIGAILLLVMVKLVESIVTDPIRANAQLWPLVYAQSVFGFGAVFTMLYLAA 365 Query: 358 YTK 360 + Sbjct: 366 RPR 368 >gi|209885016|ref|YP_002288873.1| permease YjgP/YjgQ [Oligotropha carboxidovorans OM5] gi|209873212|gb|ACI93008.1| permease YjgP/YjgQ [Oligotropha carboxidovorans OM5] Length = 385 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 79/357 (22%), Positives = 164/357 (45%), Gaps = 7/357 (1%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + Y++R SFL+ + + + WV Q L+ I+L+++ +++ + L I+G IP + + Sbjct: 5 IDAYVVRSTLLSFLIVLISLTGVIWVTQALRGIDLMTAQGQTVLVFLGITGLAIPVLALI 64 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 + P + T+ L + ++E+++++ G S ++P ++ ++++ + + P Sbjct: 65 IAPLAILLAVTHTLNRLATDSEIIVMNAAGLSPWRFLRPFMYSTVIVACLISFLAVFLAP 124 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 +C +++ + + + L+ F RLD L +++ + P L G+FI D R+ Sbjct: 125 ECLRALRRWHTEIGADVLANVLQPGQFIRLD-KLVLRVQERRPGGVLVGVFIDDQRNPAE 183 Query: 184 HKIYYAQSGSIDLDRQ--AIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN--SSTIV 239 AQ+G + + ++L+DG + R KD I+ FKSY + T Sbjct: 184 RINITAQNGVVQKTDKGSFLVLSDGNLQRFQADKKDPLIVAFKSYAFDMSQFSQAPQTYN 243 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 A ++ +S L++P P + L +R+E H RL L+P +F +++ Sbjct: 244 YNARERFISELISP-PKDDQVAQRSLGQFRAELHDRLLAGLYPFVFVILAFAFLGPPRTT 302 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 RQ + I + + + V G P I + Y L ++++ MI K Sbjct: 303 RQGRNFA-ISMLILVVLVVRIGGYACSTIAVSQPAAIAVQYAMLLAVAALSGWMIVK 358 >gi|260466946|ref|ZP_05813128.1| permease YjgP/YjgQ family protein [Mesorhizobium opportunistum WSM2075] gi|259029243|gb|EEW30537.1| permease YjgP/YjgQ family protein [Mesorhizobium opportunistum WSM2075] Length = 400 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 104/358 (29%), Positives = 207/358 (57%), Gaps = 7/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E YI+R F+ + ++ + I W Q+L +I+LV+ S +S +++ ++P++ Sbjct: 1 MTVVERYIMRRAFVVFMAALVWTLAIVWTTQVLAKIDLVTDSGQSALTFFEVASLILPSI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + L+ MN ++EL +++ +G SR T+++P++ LA+ S+F F +N Sbjct: 61 IPIVVPFALVVAVAQTLSVMNSDSELAVVNASGASRWTIVRPIMLLALAASVFSFAVDNG 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I+P R + L A+++ L ++E F +++D L+++I + P+N L GIF+ DSR+ Sbjct: 121 IDPYARQKNRALVAESRSDLLSLIIQEGTFRKIEDGLFLQIGERLPDNKLGGIFVADSRE 180 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--S 236 + +YYA++GSI + +++NDG +HRK+ ++ D+S+++F SY + S + Sbjct: 181 EGVNLVYYAKTGSIIERGGEKVLMMNDGVIHRKT-LTGDLSVIRFTSYAFDMSAFMSAAN 239 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L DQ +LLNP+ N+ NY+ + + YR+E +R ++W + ++F LI++ A Sbjct: 240 QVTLLPKDQTTQYLLNPSANDKNYQ-QNPQEYRAEIDQRFSEWTYSMVFALIALAVAGDA 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + +++P+ +++IS V W + K ++ P Y ++Y S++ + I Sbjct: 299 R-SHREARVNPLITAIAISLFVRWLGFFAASKADEIPQYGYMVYGVPIVASAVAIWFI 355 >gi|15888448|ref|NP_354129.1| hypothetical protein Atu1108 [Agrobacterium tumefaciens str. C58] gi|15156140|gb|AAK86914.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58] Length = 389 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 130/362 (35%), Positives = 208/362 (57%), Gaps = 9/362 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YILR + FL++ L ++ I W IQ+LQRINLV+ + +S+ + ++ ++PT+ Sbjct: 1 MKLLENYILRRTTQMFLVALLPVLAIIWTIQVLQRINLVTDTGQSMGSFMALATMILPTL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T + T+MN ++EL IID G R + +PVL LA +LS+F F N Sbjct: 61 IPVVLPFALVIGITQIFTTMNNDSELAIIDAAGAPRSVMYRPVLILAAVLSLFSFTITNF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 IEP R++ +Q+ A A L S +EE F + D LY++I++ +G+F+ D RD Sbjct: 121 IEPPARNSARQMVAAAYADLLSSVIEEKTFRTIQDGLYVQIAQRQGRIL-KGLFVADRRD 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES---ANSST 237 IYYA+ G ID ++ + DGEV +K+P +SI+KF SY + S Sbjct: 180 PNFDLIYYAKEGMIDESGTSLTMRDGEVQQKTPDG-KVSIVKFLSYAFDLSTMSEKQDSE 238 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 L D +L FLL+P+ NN +Y+ ET+RSE HKRL+ W+F F LIS+ A Sbjct: 239 PSLSPGDASLGFLLSPDENNASYK-RSPETFRSELHKRLSDWMFAFSFALISLAIAADSR 297 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC--ISSIFLLMIK 355 + ++HP+ +L +F + W Y+ ++++Q+ +IP++Y ++ F+LM Sbjct: 298 -SHREARLHPMVAALVTAFMLRWLGFYVTNQVKQSAAFIPLVYAVPGLSGAAAAFVLMTG 356 Query: 356 KK 357 +K Sbjct: 357 RK 358 >gi|126739399|ref|ZP_01755092.1| hypothetical protein RSK20926_20820 [Roseobacter sp. SK209-2-6] gi|126719499|gb|EBA16208.1| hypothetical protein RSK20926_20820 [Roseobacter sp. SK209-2-6] Length = 376 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 64/367 (17%), Positives = 133/367 (36%), Gaps = 7/367 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M ++ Y+L F L +V + WV + + + + +S + ++ + +P + Sbjct: 1 MSRYDRYVLSQYLLFFGFFALILVAVFWVNRAVVLFDRLIGDGQSALVFVEFTALTLPNL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + MV P + V + +EL ++ TGTS + +P L ++ ++ + ++ Sbjct: 61 IRMVLPVAVFASSVWVTNRLQSESELTVLRATGTSPWQMARPALVFGLVAALMMSALTHV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P S ++ + +T L E F + I K + TL+ +F+ D RD Sbjct: 121 LLPASISQLEIREREVSRNVTARLLTEGNFLHPAKGITFYIRKIESDGTLKDVFLSDRRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAI--ILNDGEVHRKSPISKDISIMKFKSYTLQTESA--NSS 236 + Y + D + I+ +G R + ++ +S F ++ + S+ Sbjct: 181 PNSSVTYTGSEAFLVRDGEKTHLIMVNGMAQRFTKDTRRLSTTNFSDFSYDISALARKSA 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 +L N E H R + L V LI A Sbjct: 241 DRSRNIRAIPSLEILTAREQITNTDGYSAGALAEELHLRFARALVCVTVALIGFSALMLG 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF--CISSIFLLMI 354 R ++ + V + + ++P P++YL I + L + Sbjct: 301 TFSRFG-VWRQALLAFLLLILVEGLRGVVSEPVLKDPTLWPLIYLPAVTGLIIAAGFLQL 359 Query: 355 KKKYTKI 361 + T+I Sbjct: 360 AARPTRI 366 >gi|240850232|ref|YP_002971625.1| putative permease, YjgP/YjgQ family [Bartonella grahamii as4aup] gi|240267355|gb|ACS50943.1| putative permease, YjgP/YjgQ family [Bartonella grahamii as4aup] Length = 396 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 123/358 (34%), Positives = 211/358 (58%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ E YIL+ + F + V ++W +QIL RIN +++S ++L +L+ S L+P+V Sbjct: 1 MRIIEFYILKRVLVLFSSVMIAAVGVSWTVQILARINFLTTSKQTLLTVLQFSLSLVPSV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V PF + T +L++M++++EL +I+ +G + T+ KP+L LAI+ S F N Sbjct: 61 VFLVIPFALVIAITTILSAMHQDSELAVINASGFPKSTVWKPILLLAIVASCISFSIANF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ R ++Q+ A A L ++ E F +L ++LYI+I + NPN TL+ +FI D RD Sbjct: 121 VVPQARLHMRQMLASAHFDLINLFINEGSFQKLANNLYIEIGERNPNGTLERLFIADQRD 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 +T YYA SI + + ++LN+GE+ R + + +SI++F SYT + Sbjct: 181 PKTDLFYYATDASIVSNKNGSFLVLNNGEIERVNHQNNSVSIVQFSSYTFSLGEFIPSDK 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 L D++LS+L NP+P +P Y+ + L Y++EFH+RLTQWL+P++F LI++ AA Sbjct: 241 APTLYPKDRSLSYLQNPDPKDPYYQRKPL-QYKAEFHRRLTQWLYPIVFSLIALAAAGDV 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RQ + F ++++SF V+W + K + + YIP+LY+ S+ M+ Sbjct: 300 CSHRQARHSAN-FSAIALSFLVYWIGYFFAEKAKNDLAYIPLLYIMPIGTSAFVFFML 356 >gi|163792838|ref|ZP_02186814.1| Predicted permease [alpha proteobacterium BAL199] gi|159181484|gb|EDP65996.1| Predicted permease [alpha proteobacterium BAL199] Length = 369 Score = 150 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 60/361 (16%), Positives = 137/361 (37%), Gaps = 4/361 (1%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ I + + + + + W+ Q L+ ++L+ + + + ++ L+PT L Sbjct: 2 RITRYLAGQILTAMVFIVVSMTCVIWLSQSLRFVDLIVNRGLPIPSFVYLTLMLMPTWLS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P T V + + EL+++ G S + L P + +A+ + ++ + Sbjct: 62 IVLPIAAFAATVFVYNKLTNDRELVVLSAAGLSPLRLAGPAMVVAVATMLATYLMTLYLV 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P K+L + + L E F + D L + + L GI + D + + Sbjct: 122 PMSYRGFKELQFQIRHNFDHLVLREGEFRSIGDGLTVYVRAREDTGQLAGIVVHDQSNAK 181 Query: 183 THKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 A+ G++ + +++ +G + + +S++ F YT+ + Sbjct: 182 KTVTLVAERGALITAPEGPRVVMANGSRQERDVETGRVSVLYFDRYTIDLGAMREEVQRT 241 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + L +P P+ + Y +E H+RLT L + I + R Sbjct: 242 IRDQNELFIDDLLHPTEQITDPKNFDEYIAEGHQRLTSPLLALSLTAIGVAVLLSGEFSR 301 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL-MIKKKYT 359 + + I I L + + + P +PI++ + + L M +++ Sbjct: 302 RGQTIRIITAVLLAGCA-EAMGLGSKYLVVRYPSMVPIMWFAVIVPFLLALASMTQRRLK 360 Query: 360 K 360 + Sbjct: 361 R 361 >gi|163868028|ref|YP_001609232.1| hypothetical protein Btr_0827 [Bartonella tribocorum CIP 105476] gi|161017679|emb|CAK01237.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476] Length = 396 Score = 149 bits (375), Expect = 6e-34, Method: Composition-based stats. Identities = 125/358 (34%), Positives = 210/358 (58%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ E YIL+ + F + V ++W +QIL RIN +++S ++L +L+ S L+P+V Sbjct: 1 MRIIEFYILKRVFFLFSSVLIAAVGVSWTVQILARINFLTTSKQTLLTVLQFSLSLVPSV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V PF + T L++MN+ +EL +I+ +G + T+ KPVL LAI+ S F N Sbjct: 61 IFLVIPFALVIAVTTTLSAMNQESELAVINASGFPKSTVWKPVLLLAIVASCISFSIANF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ R ++Q+ A A L ++ E F +L ++LYI+I + NPN TL+ +FI D RD Sbjct: 121 VVPQARLHMRQMLASAHFDLINLFISEGSFQKLANNLYIEIGERNPNGTLERLFIADQRD 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 +T YYA SI + + + +ILN+GE+ R + + +SI++F +YT + Sbjct: 181 PKTDLFYYATKASIVSNKNGRFLILNNGEIERVNHENNSVSIVQFSAYTFSLGEFIPSDK 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 T L D++LS+L NP+P +P Y+ + L Y++EFH+RLTQWL+P++F LI++ AA Sbjct: 241 TPTLYPKDRSLSYLQNPDPKDPYYQRKPL-QYKAEFHRRLTQWLYPIVFSLIALAAAGNV 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RQ + F ++++SF V+W + K + + Y+P+LY+ S M+ Sbjct: 300 GSHRQARYCAN-FSAIALSFLVYWIGYFFAEKAKNDLAYVPLLYITPIGTSLFVFFML 356 >gi|49475339|ref|YP_033380.1| hypothetical protein BH05450 [Bartonella henselae str. Houston-1] gi|49238145|emb|CAF27353.1| hypothetical protein BH05450 [Bartonella henselae str. Houston-1] Length = 396 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 121/358 (33%), Positives = 205/358 (57%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYIL+ I F + + I+W +QIL RIN +++S ++L +L+ S L+P+V Sbjct: 1 MRIIELYILKRILILFSAVMIAAIGISWTVQILARINFLTTSKQTLLTILQFSISLVPSV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V PF + T+ L++MN+++EL II +G + T+ +P+L +A + S F N Sbjct: 61 IFLVIPFALLIAITSTLSAMNQDSELAIISASGFPKSTVWRPILLIAFVASCASFFIANF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ R ++Q+ A L ++ E F +L ++LYI+I + NP+ TL +FI D RD Sbjct: 121 VIPQARLNMRQMLATTHYDLINLFISEGSFQKLANNLYIEIGQRNPDGTLAHLFIADQRD 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 + YYA S+ + + ++LN+GE+ R + + +SI++F SYT N Sbjct: 181 PKIDLFYYATKASVVSNKNGHFLVLNNGEIERINHQNDSVSIVQFSSYTFSLGEFIPNDK 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 T L D+ LS+L NPNP + Y+ + L YR+EFH+RLT+WL+P++F LI++ AA Sbjct: 241 TPTLYPKDRPLSYLRNPNPKDLYYQRKPL-QYRAEFHRRLTEWLYPIVFSLIALAAAGDT 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RQ F +++ SF V+W + K + + Y+P+LY+ +S + M+ Sbjct: 300 RSYRQVGNSAN-FSAIAFSFLVYWIGYFAAEKAKSDLAYVPLLYIIPIGVSILVFFML 356 >gi|319784423|ref|YP_004143899.1| permease YjgP/YjgQ family protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170311|gb|ADV13849.1| permease YjgP/YjgQ family protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 400 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 102/358 (28%), Positives = 204/358 (56%), Gaps = 7/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R F+ + ++ + I W Q+L +I+LV+ S +S +++ ++P++ Sbjct: 1 MKVVERYIMRRAFVVFMAALVWTLAIVWTTQVLAKIDLVTDSGQSALTFFEVAALILPSI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + L+ MN ++EL +++ G SR T+++P++ LA+ ++F F +N Sbjct: 61 IPIVVPFALVVAVAQTLSVMNSDSELAVVNAAGASRWTIVRPIMLLALAAAVFSFAVDNG 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I+P R + L A ++ L ++E F ++DD L++++ + PNN L GIF+ DSR+ Sbjct: 121 IDPYARQKNRALVASSRADLLSLIIQEGTFRKIDDGLFLQVGERLPNNRLGGIFVADSRE 180 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + +YYA++GSI + +++NDG +HRK+ ++ D+S+++F SY + ++ Sbjct: 181 EGVNLVYYAKTGSIIERGGEKVLMMNDGVIHRKT-LTGDLSVIRFTSYAFDMSAFMAAAS 239 Query: 239 VLK--ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + DQ +LLNP+ N+ Y+ + YR+E ++R ++W + ++F LI++ A Sbjct: 240 AVTLLPKDQTTQYLLNPSANDKYYQ-QSPYEYRAEVNQRFSEWTYSMVFALIALAVAGDA 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + +++P+ +++IS V W + K ++ P Y ++Y S++ + I Sbjct: 299 R-SHREARVNPLITAITISLFVRWLGFFAASKADEIPQYAYMVYGVPIVASAVAIWFI 355 >gi|294678216|ref|YP_003578831.1| permease YjgP/YjgQ family protein [Rhodobacter capsulatus SB 1003] gi|294477036|gb|ADE86424.1| permease YjgP/YjgQ family protein [Rhodobacter capsulatus SB 1003] Length = 376 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 61/356 (17%), Positives = 135/356 (37%), Gaps = 5/356 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y+L + F L +V + WV + + + + ++ ++L+ + +P V Sbjct: 1 MKRLDRYLLSQLMAIFGFFALVLVSVYWVNRAVLLFDKLIGDGQTAWVVLEFTALTLPKV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V P + ++ +EL+++ + G S L +PV ++++ + + Sbjct: 61 ISLVLPVAAFAAVLYAINRLSGESELVVMQSAGASPWRLARPVAVFGLIVAALMLALVHE 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P R+ + + A+ +T +L E F + + I + + L IF+ D+R Sbjct: 121 LVPASRARLAERQAQVSQDVTARFLTEGSFQTPTAGITVYIREISDLGELLDIFLYDARG 180 Query: 181 TQTHKIYYAQSGSIDLDRQAI--ILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + IY A+ I ++ DG P +++ +F +T A + + Sbjct: 181 QRAETIYTAEKALIVPSEAGPKLVMFDGTAQTLRPSDGSLALTRFSDFTYDLGGAIGTGL 240 Query: 239 VLKAN--DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + + L+ P P + E + RL Q L + LI+ A Sbjct: 241 RGRIDWEEVPSRDLIAPGPELLAATGSTVAAAHLELNDRLAQPLMAPVAALIAAAAMMLG 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 R I +++ G+ + +P + Y+ + L Sbjct: 301 GFSRLG-LWRQIGLAVLALIGLQSLSNVATSMTRADPALWALHYMPALAGLAGVAL 355 >gi|319408320|emb|CBI81973.1| conserved membrane hypothetical protein [Bartonella schoenbuchensis R1] Length = 396 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 113/358 (31%), Positives = 205/358 (57%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYIL+ + F + + I+ +Q+L RI+ +++S ++ +L S L+P V Sbjct: 1 MRIIELYILKRVFILFSAVMVAAIGISLTVQVLARIDFLTTSGQTFLTVLYFSSLLVPPV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ PF + T +L++MN+++EL II +G S+ T++KP+L LAI + F N Sbjct: 61 ISLIIPFALVIAITTILSTMNQDSELAIISASGFSKNTVLKPILLLAIFTACTSFSIANF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ R ++Q+ A L ++ E F L ++LYI+I + P+ T+ +FI D RD Sbjct: 121 VAPQARLNMRQMLANTHSDLINLFIREGSFQALTNNLYIEIGERYPDGTIGRLFIADQRD 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 ++ +YYA+ G+I + + ++LNDGE+ R + + +SI+KF SYT N+ Sbjct: 181 SKIDLLYYAKKGAIVSNKNGNFLVLNDGEIERVNYQNDSVSIIKFNSYTFSLSEFIPNNG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + D+ LS+LL+P+P +P Y+ Y++EFH+RLT+WL+P++F LI++ AA Sbjct: 241 VPTIYPKDRPLSYLLHPDPYDPYYQ-RNPLQYKAEFHRRLTEWLYPIVFALIAVAAAGDA 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RQ +F +++ S ++W + K + + Y+P+LY+ +S + M+ Sbjct: 300 RSHRQAHTSAIVF-TITFSLLIYWIEYFFAEKTKNDLTYVPLLYITPIGVSVLIFFML 356 >gi|154253775|ref|YP_001414599.1| permease YjgP/YjgQ family protein [Parvibaculum lavamentivorans DS-1] gi|154157725|gb|ABS64942.1| permease YjgP/YjgQ family protein [Parvibaculum lavamentivorans DS-1] Length = 388 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 63/375 (16%), Positives = 156/375 (41%), Gaps = 17/375 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +KS Y+ F+++ + + I W+ Q L+ ++++ + ++L +++ +P+ Sbjct: 2 LKSLSRYLFFQTLGPFVVASVVLSGIIWLTQALRMLDVLITQGQTLLTFFELTVLALPST 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L +V P L + ++E++++ G SR + P+L +A+ S+ + Sbjct: 62 LMIVLPISLFCAVLYSLHKLISDSEIVVMFAAGVSRWVVALPLLAIAMGTSVIILAFSIY 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P +K + + + + + E F L + + + + T G+ + D R Sbjct: 122 IAPAGMRELKSRLVEIRSDVATAMIREGTFSNPATGLTVFVRERAADGTTYGVLVHDGRI 181 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDIS---IMKFKSYTLQTES--A 233 Y A++GS+ + +++ +G + R S + S + F YT Sbjct: 182 PSAPVTYMAETGSLVRGPNGPLLVMFNGNIQRASRSGTETSAATFLYFDKYTYDLSQYME 241 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + T+ + ++ L+NP ++ Y + + ++ H+RL + +PV+ LI + A Sbjct: 242 DEPTLSYEGRERYFHELVNPASDDL-YGQQNRDKLLADAHERLVEGFYPVMLTLIGLAAL 300 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL- 352 R+ + +++ V + + + N P++Y+ + I L Sbjct: 301 LPAPFNRRGYASRMATAA-AMALTVRILGFALSNAVGNNLALAPLMYILPIAVCGICLAV 359 Query: 353 -------MIKKKYTK 360 ++ ++ ++ Sbjct: 360 IAGVRFDILWRRLSR 374 >gi|114328863|ref|YP_746020.1| hypothetical protein GbCGDNIH1_2199 [Granulibacter bethesdensis CGDNIH1] gi|114317037|gb|ABI63097.1| hypothetical membrane spanning protein [Granulibacter bethesdensis CGDNIH1] Length = 400 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 74/358 (20%), Positives = 159/358 (44%), Gaps = 7/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + + Y++R + + + +V + W+ Q L+ I LV + S+ + LK++G LIP+ Sbjct: 18 LTTLDRYVMRQLLVALVACTCGLVALIWLTQSLRFIELVVNRGLSVFVFLKLTGLLIPSF 77 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + V + + EL ++ G S + +P L +A+L + F+ Sbjct: 78 VAVIIPITTYVVVQFVYQRLAGDRELTVMRAAGLSSWVMARPALLVALLTMLLSFVLNLW 137 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P S ++ + + + L++ +F + DD+ + I K + + TL GI I D+R Sbjct: 138 IVPAAFSAFREYQWEIRNKMAAFLLQDGVFTPVSDDMIVYIRKRDADGTLHGILIDDARK 197 Query: 181 TQTHKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA-NSS 236 +H AQ G ++ ++L G + ++I+ F T+ E + Sbjct: 198 ADSHATIIAQRGRMEQGSNGAPQVVLESGSRQELDRHTGRLNILTFNENTISLEQSGKDE 257 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 AN+ +L+ LL+P+P+ + R E H+RL+ L + F ++++V+ Sbjct: 258 QRSRDANEMSLTELLHPDPSQVMA--RDIPKLRVEAHRRLSGPLNVLSFAVVALVSVLNG 315 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 A R + P + + + + + + P IP++++ ++ Sbjct: 316 AFRRHGGLLRPGVAA-LVVVALLAVGLAVANAAAKLPQLIPLIWIAAVAPGMAGAWIM 372 >gi|115525294|ref|YP_782205.1| permease YjgP/YjgQ [Rhodopseudomonas palustris BisA53] gi|115519241|gb|ABJ07225.1| permease YjgP/YjgQ family protein [Rhodopseudomonas palustris BisA53] Length = 388 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 69/359 (19%), Positives = 158/359 (44%), Gaps = 5/359 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M S + YI R SF + + + W+ Q L+ I+L++S +++ L ++ +P + Sbjct: 1 MGSTDSYIFRTTLASFAVILASLTGVIWITQALRGIDLMTSQGQTILTFLGLTSMAVPVL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + + L + ++E+++++ G S + L++P ++ A ++++ + Sbjct: 61 ILVIAPLALMIAVAHTLNRLATDSEIIVMNAAGLSPLRLMRPFMYAAAVVALLVGFIGAY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ I ++ + + L+ F +L+ +L I++ + P L G+FI D RD Sbjct: 121 VAPEGLRRINNWDSEITADILANILQPGRFAQLEQNLTIRVRERQPGGLLVGVFIDDRRD 180 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANSST 237 + A G++ D ++L DG + R +D +++ F Y + + Sbjct: 181 PKERVSIIADHGTVLKNADGSFLVLEDGTLQRFELGKRDPALVAFGRYAFDMSKFSKARD 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L L+ P P +P L +R+E H RL ++P F ++ Sbjct: 241 VTYGIRERYLWELIWPQPGDPLVA-RLPNQFRAEMHDRLMAPIYPFAFAALTFAFLGMPR 299 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 RQ + +++ F + NP++ + YL L ++ + + + Sbjct: 300 TTRQSRNFSVAG-AIAAVFLLRLAGFACSIMTNTNPWFAALQYLLLAGAIALGMWISAR 357 >gi|99080790|ref|YP_612944.1| permease YjgP/YjgQ [Ruegeria sp. TM1040] gi|99037070|gb|ABF63682.1| permease YjgP/YjgQ [Ruegeria sp. TM1040] Length = 379 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 62/359 (17%), Positives = 126/359 (35%), Gaps = 5/359 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M ++ Y+L F L +V + W+ + + + + +S+ L+IS +P + Sbjct: 1 MSRYDRYVLSQYLLFFGFFALILVAVFWINRAVSLFDWLIGDGQSVLAFLEISALSLPNL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + MV P T V +N +EL ++ TG+S L +P + +L + + Sbjct: 61 VRMVLPLAAFAATVWVTNRLNSESELTVLRATGSSPWQLARPAMVFGLLSAAMMSALSLF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + ++ A+ +++ L F + + I P+ TLQ +F+ D RD Sbjct: 121 LLPASLAQMQFREAELSRSVSAKLLNAGSFLHPSEGITFFIGSIEPDGTLQNVFLTDQRD 180 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 Y + + D +IL DG RK + +S F ++ + + Sbjct: 181 PSVEITYTSDRAYLVREDDEAHLILVDGLAQRKEAHNDRLSTTAFSDFSYPLGDLSPARA 240 Query: 239 --VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + LL + E H R + +I + Sbjct: 241 AGARPLRNIPTLDLLRERASITEEEGHSAGAQAEELHLRFARAAVTFAVVMIGVSTLLMG 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 R + + + + + + +N P++YL I +L + Sbjct: 301 GFSRFG-IWKQVLGAFVLLILIEGMRGVVADPVRENAAMWPLIYLPATLGVMISVLFLH 358 >gi|304392005|ref|ZP_07373947.1| permease YjgP/YjgQ family protein [Ahrensia sp. R2A130] gi|303296234|gb|EFL90592.1| permease YjgP/YjgQ family protein [Ahrensia sp. R2A130] Length = 402 Score = 147 bits (369), Expect = 3e-33, Method: Composition-based stats. Identities = 69/359 (19%), Positives = 155/359 (43%), Gaps = 7/359 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + E Y+ + + +V + WV++ +Q ++++ S + + L I+ +P++ Sbjct: 3 LSLLERYVFKKALVMVATALAGLVGVIWVVRAVQEVDVIMSKGQGIMTYLTITTLGVPSL 62 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + ++++N +E++++ +G SR +L +P L+LA L++I ++ Sbjct: 63 IAAVAPLALMIGMVRTISALNDESEMVVMHASGASRWSLARPFLWLAGLMAIMIYFLSLY 122 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + +++ + L +++ F +L L I+ P L+G+FI D+RD Sbjct: 123 GGPHSLTKMRETVNTMRADLISVVVKDGEFQQLGGGLMFHIATRLPGGELKGVFITDTRD 182 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 H Y A SG+I + ++L G+V R + + + S + F SY + + T Sbjct: 183 ENEHLTYLADSGTISKIGEDAYLVLRQGQVQRTTVKTNNSSFIDFDSYAFNLSTFSGGTG 242 Query: 239 VLKAN---DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 K+ + S L +P+P + ++ +R EFH R T L+ I I+ Sbjct: 243 DGKSRSRGELRTSELFSPDPADEMFK-RAPHRFRVEFHTRFTSGLYAF-MVAIVILVCMG 300 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 ++ I ++ + + + + ++ P ++ ++ Sbjct: 301 NPQSHRQGLTVLITSTVVLVILLRGAGILVENNLKATPLLWVAVWGIPLLAIGNSFRLL 359 >gi|83953614|ref|ZP_00962335.1| membrane protein, putative [Sulfitobacter sp. NAS-14.1] gi|83841559|gb|EAP80728.1| membrane protein, putative [Sulfitobacter sp. NAS-14.1] Length = 376 Score = 145 bits (366), Expect = 7e-33, Method: Composition-based stats. Identities = 62/359 (17%), Positives = 130/359 (36%), Gaps = 5/359 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y+L F L +V I W+ + + + + ++ + L+ + +P + Sbjct: 1 MAKFDRYMLSQFLILFSFFALILVAIFWINRAVVLFDRLIGDGQTALVFLEFTVLGLPKL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + V+ M +EL ++ TGTS L +PV + ++I + + ++ Sbjct: 61 ITTVLPIATFAGSVYVINRMTSESELTVLQATGTSPWRLARPVFVYGLCVAIMMSVLTHL 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A+ +T L E F + + + L+ +F+ D R+ Sbjct: 121 LLPLSNGQLSEREAEISQNVTARLLTEGTFLHPTSKVTFYTRVIDADGVLRDVFLSDRRN 180 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 IY A + D +I+ DG R K +S KF+ ++ S ++ Sbjct: 181 PDESVIYTASEAYLIRNGDGTTLIMVDGMAQRLEMAGKRLSTAKFRDFSFDISSLVSSDK 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + + E +R + F +I +I Sbjct: 241 PRTQSIDAMTTAEMFAQWDQLETITKSSAGDIAEELAQRFSSAAFCMIAAMIGYATLVLG 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 R I I+ + + ++ + + P+L+L + I + MI Sbjct: 301 GFSRFG-VWREIVIAFGLLIALDGLRGTLVDTVRDDASRWPLLFLPSLIGAVIVIGMIW 358 >gi|77463457|ref|YP_352961.1| permease [Rhodobacter sphaeroides 2.4.1] gi|77387875|gb|ABA79060.1| Predicted permease [Rhodobacter sphaeroides 2.4.1] Length = 376 Score = 145 bits (366), Expect = 8e-33, Method: Composition-based stats. Identities = 68/367 (18%), Positives = 136/367 (37%), Gaps = 7/367 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y+L + F L +V + W+ + + + + S +S + L+ S +P V Sbjct: 1 MARFDRYLLSQLVALFGFFSLVLVLVYWINRAVGLFDDLISDGQSALVFLEFSLLALPNV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V P T V+ +++ +EL+++ TG S L +PV++ +++++ + + N+ Sbjct: 61 IRLVLPLSAFAATIYVVNRLSQESELVVMQATGFSAFRLARPVIWFGLIVALMMIVLMNL 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P R+T+ SA+ T +L + F D + + I + L+ + +VD RD Sbjct: 121 LVPASRATLSARSAEISQNATARFLRDGEFLHPADGVTLYIREVTETGELRDLLLVDDRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAI--ILNDGEVHRKSPISKDISIMKFKSYTLQT--ESANSS 236 Y A+ + ++ DG + + + + +F T S Sbjct: 181 PARSTAYTARRALLVRTDTTPKLLMIDGSAQTLTREGRRLELTRFDDVTYDLGAFMTGSG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + LL P E H R+ Q LI A Sbjct: 241 PKRRVLEELPTMTLLAPTAEVLEETRSTRAAALYEGHSRIGQPFLGFASSLIGFAALLLG 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF--CISSIFLLMI 354 + R I ++ + V + P+ Y I LL I Sbjct: 301 SFSRFG-LWWQILFAVLLLIVVQTINVAASGVGVTDEQLWPLAYAAPVTGFAIGILLLWI 359 Query: 355 KKKYTKI 361 ++ ++ Sbjct: 360 GQRPRRL 366 >gi|126462312|ref|YP_001043426.1| permease YjgP/YjgQ family protein [Rhodobacter sphaeroides ATCC 17029] gi|126103976|gb|ABN76654.1| permease YjgP/YjgQ family protein [Rhodobacter sphaeroides ATCC 17029] Length = 376 Score = 145 bits (366), Expect = 8e-33, Method: Composition-based stats. Identities = 68/367 (18%), Positives = 137/367 (37%), Gaps = 7/367 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y+L + F L +V + W+ + + + + S +S + L+ S +P V Sbjct: 1 MARFDRYLLSQLVALFGFFSLVLVLVYWINRAVGLFDDLISDGQSALVFLEFSLLALPNV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V P T V+ +++ +EL+++ TG S L +PV++ +++++ + + N+ Sbjct: 61 IRLVLPLSAFAATIYVVNRLSQESELVVMQATGFSAFRLARPVIWFGLIVALMMIVLMNL 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P R+T+ SA+ T +L + F D + + I + L+ + +VD RD Sbjct: 121 LVPASRATLSARSAEISQNATARFLRDGEFLHPADGVTLYIREVTETGELRDLLLVDDRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAI--ILNDGEVHRKSPISKDISIMKFKSYTLQT--ESANSS 236 Y A+ + ++ DG + + + + +F T S Sbjct: 181 PARSTAYTARRALLVRTDTTPKLLMIDGSAQTLTREGRRLELTRFDDVTYDLGAFMTGSG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + LL P E H R+ Q LI A Sbjct: 241 PKRRVLEELPTMTLLAPTAEVLEETRSTRAAALYEGHSRIGQPFLGFASSLIGFAALLLG 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF--CISSIFLLMI 354 + R I ++ + V + P+ Y + I LL I Sbjct: 301 SFSRFG-LWWQILFAVLLLIVVQTINVAASGVGVTDEQLWPLAYAAPVTGFVIGILLLWI 359 Query: 355 KKKYTKI 361 ++ ++ Sbjct: 360 GQRPRRL 366 >gi|49474101|ref|YP_032143.1| hypothetical protein BQ04630 [Bartonella quintana str. Toulouse] gi|49239605|emb|CAF25962.1| hypothetical protein BQ04630 [Bartonella quintana str. Toulouse] Length = 396 Score = 145 bits (365), Expect = 9e-33, Method: Composition-based stats. Identities = 121/358 (33%), Positives = 205/358 (57%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYIL+ I F + + I+W +QIL RIN +++S ++L +L+ S L+P+V Sbjct: 1 MRIIELYILKRILILFSAVMIAAISISWTVQILARINFLTTSRQTLLTVLQFSLSLVPSV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V PF + T+ L++MN+++EL II G + T+ KP+L LA++ S F+ N Sbjct: 61 IFLVIPFALVIAITSTLSAMNQDSELAIISAAGFPKSTVWKPILLLALIASCASFLIANF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ R ++Q+ A A L ++ E F +L ++LYI+I + NP+ TL +FI D RD Sbjct: 121 VAPQARFHMRQMLANAHSDLINLFINEGSFQKLANNLYIEIGERNPDGTLGRLFIADQRD 180 Query: 181 TQTHKIYYAQSGSIDLD--RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 + YYA SI + ++LN+GE+ R + + +SI++F YT N Sbjct: 181 PKIDFFYYATKASIVSNKSGNFLVLNNGEIERINHQNDSVSIVQFSFYTFSLSEFIPNDK 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 T + D+ LS+LLNP+P +P Y+ L YR+EFH+RLT+WL+ ++F LI++ AA Sbjct: 241 TPTIYPKDRPLSYLLNPDPKDPYYQRRPL-QYRAEFHRRLTEWLYSIVFSLIALAAARDA 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R+ + F +++ S V+W + K + + Y+P+LY+ +S + M+ Sbjct: 300 RSYRKTRNFAN-FSAIAFSLLVYWIGHFFAEKAKSDLAYVPLLYITPIGVSILVFFML 356 >gi|254437787|ref|ZP_05051281.1| putative permease, YjgP/YjgQ family [Octadecabacter antarcticus 307] gi|198253233|gb|EDY77547.1| putative permease, YjgP/YjgQ family [Octadecabacter antarcticus 307] Length = 379 Score = 145 bits (365), Expect = 9e-33, Method: Composition-based stats. Identities = 62/359 (17%), Positives = 135/359 (37%), Gaps = 5/359 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y+L + F L +V I W+ + ++ + + + +S + L+++ +P+V Sbjct: 1 MARFDRYMLSQLLVLFGFFSLILVVIYWINRAVRLFDRLIADGQSAWVFLELTSLSLPSV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V P + V M+ ++EL ++ TG S L +P+++ ++++ + + +I Sbjct: 61 IRIVLPLSAFVAAVYVTNRMSSDSELTVVQATGYSPFRLARPIIYFGLIVAALMSVLTHI 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + ++ +T L F DD+ I + P+ + IFI +S D Sbjct: 121 LVPLSTEQLTSRQSEISQTMTARLLTPGEFLTPSDDVTFYIRELTPSGEMLDIFISESTD 180 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST- 237 Y A + + +++ DG + + F + + + Sbjct: 181 PTRRTTYTAARAYLVRTENGPQLVMIDGLTQTLDHETNRLLTTGFADFVYDVGALMNDEF 240 Query: 238 -IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + N + LL P+ + + H R+ Q + GL+ A Sbjct: 241 VRRVSVNGLSTLALLRPSAAAIAATNKTGYELKLRGHDRIAQAALGFVAGLVGFSALVVG 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 R I ++ + + S NP P +YL I +++ Sbjct: 301 GFSRFG-LWRNILFAVGLVILLKILESTGTSIARANPALWPFVYLAGIGGVVISAILLH 358 >gi|259419313|ref|ZP_05743230.1| permease YjgP/YjgQ [Silicibacter sp. TrichCH4B] gi|259345535|gb|EEW57389.1| permease YjgP/YjgQ [Silicibacter sp. TrichCH4B] Length = 379 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 58/359 (16%), Positives = 125/359 (34%), Gaps = 5/359 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M ++ Y+L F L +V + W+ + + + + +S+ L+IS +P + Sbjct: 1 MSRYDRYVLSQYLLFFGFFALILVAVFWINRAVSLFDWLIGDGQSVLAFLEISALSLPNL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + MV P T V +N +EL ++ TG+S L +P + +L + + Sbjct: 61 VRMVLPLAAFAATVWVTNRLNSESELTVLRATGSSPWQLARPAMAFGVLSAAMMSALSLF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + ++ A+ +++ L F + + +P+ TL +F+ D RD Sbjct: 121 LLPASLAQMQLREAELSRSVSAKLLNAGNFLHPSAGITFFVGSIDPDGTLNNVFLTDQRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQ--AIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 Y + + + +IL DG RK + +S F ++ + + Sbjct: 181 PSVEITYTSDRAYLVREDDMAHLILVDGLAQRKEAHNDRLSTTAFADFSYPLGDLSPART 240 Query: 239 V--LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + LL E H R + +I + Sbjct: 241 MGARPLRNIPTLDLLRDRDEITQNEGHSAGAQAEELHLRFARAAVTFAVVMIGVSTLLLG 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 R + ++ + + + + N P++YL I ++ + Sbjct: 301 GFSRFG-IWKQVLVAFVLLILIEGMRGVVSEPVRDNAQMWPLIYLPAAIGVLISMIFLH 358 >gi|114569777|ref|YP_756457.1| permease YjgP/YjgQ family protein [Maricaulis maris MCS10] gi|114340239|gb|ABI65519.1| permease YjgP/YjgQ family protein [Maricaulis maris MCS10] Length = 373 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 66/367 (17%), Positives = 136/367 (37%), Gaps = 10/367 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y + F+ + +A + Q L ++LVS +E+ +K++ +P + Sbjct: 1 MILVQRYFFNQLLWPFMTAIAAFAGLALLTQSLSNVDLVSGYSETALTFIKVTALALPHL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + + L + ++EL+I G SR L+ P++ L + + I + Sbjct: 61 TALLVPIALFVAVLSSLNRLTGDSELVIASAAGVSRFGLLSPIMRLGVYVLIANLAVNLL 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 ++P +++ + + S + F +L + I + + +Q I I DSR Sbjct: 121 LQPVAYREMRRSLHTLRSDVAASLVTPGAFSQLGQGVTIYARERGRDGRMQDILIHDSRG 180 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA--NSS 236 T Y A+ G + DR A++L DG + + ++ F Y + Sbjct: 181 TDGASTYSAREGVVVRSGDRSAMVLIDGNLQQIDSAG-ELYYANFDRYEFDLGEFVGPAD 239 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + K +D+ L LL P+ E +E H RL+ L+ + F LI+ Sbjct: 240 AMFFKESDRYLHELLWPSAAEVARTG-GPERAWAEAHYRLSAPLYNLAFALIAAACFLAG 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC---ISSIFLLM 353 R + I++ + + + YL + + Sbjct: 299 DHSRMGYGRR-VMIAVGAGLTLRLVGFAMQSASADDAAMNVAQYLVPVFGMVGAVAVIYW 357 Query: 354 IKKKYTK 360 + + Sbjct: 358 PARNRPR 364 >gi|83942394|ref|ZP_00954855.1| membrane protein, putative [Sulfitobacter sp. EE-36] gi|83846487|gb|EAP84363.1| membrane protein, putative [Sulfitobacter sp. EE-36] Length = 376 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 61/359 (16%), Positives = 128/359 (35%), Gaps = 5/359 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y+L F L +V I W+ + + + + ++ + L+ + +P + Sbjct: 1 MAKFDRYMLSQFLILFSFFALILVAIFWINRAVVLFDRLIGDGQTALVFLEFTVLGLPKL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + V+ M +EL ++ TGTS L +PV + ++I + + ++ Sbjct: 61 ITTVLPIATFAGSVYVINRMTSESELTVLQATGTSPWRLARPVFVYGLCVAIMMSVLTHL 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A+ +T L E F + + + L+ +F+ D R+ Sbjct: 121 LLPLSNGQLSEREAEISQNVTARLLTEGTFLHPTSKVTFYTRVIDADGVLRDVFLSDRRN 180 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 IY A + D +I+ DG R K +S KF+ ++ + ++ Sbjct: 181 PDEGVIYTASEAYLIRNGDGTTLIMVDGMAQRLEMAGKRLSTAKFRDFSFDISALVSSDK 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + + E R F +I +I Sbjct: 241 PRTQSIDAMTTAEMFAQWDQLETITKSSAGEIAEELTARFASAAFCMIAAMIGYATLVLG 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 R I I+ + + ++ + + P+L+L + I + MI Sbjct: 301 GFSRFG-VWREIVIAFGLLIAIDGLRGTLVETVRDDASRWPLLFLPSLIGAVIVIGMIW 358 >gi|254294286|ref|YP_003060309.1| permease YjgP/YjgQ family protein [Hirschia baltica ATCC 49814] gi|254042817|gb|ACT59612.1| permease YjgP/YjgQ family protein [Hirschia baltica ATCC 49814] Length = 385 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 75/358 (20%), Positives = 148/358 (41%), Gaps = 7/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y+ + R+ + +V IA + Q L +I+L+ + +S L +S P V Sbjct: 1 MDRFQQYLFGNVLRTMVSIVGGLVLIALLTQGLTQIDLIVENRQSAFTFLYVSMLAAPQV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + L +R++E+++ G SR+ + PVL +A + ++ Sbjct: 61 IGLLLPIALFVAAIATLNRAHRDSEIVVAQAAGMSRLQIASPVLRIAAIAALLHLCINLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 ++P +++ A+ L + ++ F +L + I K L+ + I D+RD Sbjct: 121 VQPASYREMRETLTSARTDLAATLVKPGEFNSPAHNLTVYIGKSLGGGELRTLLISDARD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAI--ILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + Y A++G++ ++ + V + + + F Y + + S Sbjct: 181 PDANTTYIARTGAVTEVEGVPAILMRNARVQKID-GNGQLWDGTFDQYIYELAAFVDSDT 239 Query: 239 VL--KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 KA+D+ L LL P+ NN Y + E + +E H RL L + ++++VA Sbjct: 240 SYVLKASDRFLHELLYPDFNNF-YDRDNAEKFYAEGHSRLALPLMNMFMAMLAVVAVLGG 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R+ + I ++ I + E NP I YL +I M Sbjct: 299 DFSRRGYQTR-ISVATGIGLFAQLLALASVSVGEDNPKLNFIQYLIPILSFTILAFMF 355 >gi|163739704|ref|ZP_02147112.1| permease YjgP/YjgQ [Phaeobacter gallaeciensis BS107] gi|161386934|gb|EDQ11295.1| permease YjgP/YjgQ [Phaeobacter gallaeciensis BS107] Length = 376 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 62/351 (17%), Positives = 128/351 (36%), Gaps = 5/351 (1%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 +L F L +V + W+ + + + + +S + L+ + +P ++ MV P Sbjct: 1 MLSQYLLFFGFFALILVAVFWINRAVVLFDRLIGDGQSALVFLEFTALALPNLVRMVLPV 60 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 + V +N +EL ++ TGTS + KP + ++ ++ + I +++ P + Sbjct: 61 AAFAASVWVTNRLNSESELTVLRATGTSPWQMAKPAMVFGLITAVMMSILTHVLLPASIA 120 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 T++Q ++ +T L E F + I + +P+ TL +F+ D R+ Y Sbjct: 121 TLEQRESEVARNVTAKLLSEGDFLHPARGVTFYIGRIDPDGTLNDVFLSDRRNAAESVTY 180 Query: 188 YAQSGSIDLDRQAI--ILNDGEVHRKSPISKDISIMKFKSYTLQTESA--NSSTIVLKAN 243 + D + ++ DG R + ++ +S F ++ S + Sbjct: 181 TGGKAYLVRDGERTHLVMVDGMSQRINTETQRLSSTIFSDFSYDISSLANKAEEKTRNIR 240 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 LL P E H R + L V LI A R Sbjct: 241 AIPSLELLGDRAKLVADGPYSAGALAEELHLRFARALVCVAVVLIGFAALMLGGFSRFG- 299 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 ++ + V + + QN P++Y+ + L+ + Sbjct: 300 VWRQALLAFVLLIFVEGLRGVVSEPVLQNAELWPLIYIPTLIGLLVGLVFL 350 >gi|319407069|emb|CBI80706.1| putative permease, YjgP/YjgQ family [Bartonella sp. 1-1C] Length = 382 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 125/358 (34%), Positives = 202/358 (56%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYIL+ I F L V I+W +QIL RIN ++++ ++ ++ S LIP+V Sbjct: 1 MRILELYILKRIFILFSAVLLGAVGISWTVQILARINFLTTNGQTFLTIVYFSSLLIPSV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ PF + T +L++MN+++EL +I +G S+ + KP+L LA+L S F N Sbjct: 61 TSLIIPFALVVAITTILSTMNQDSELAVISASGISKNIVWKPILLLAVLASFTSFSITNF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P R ++Q+ A + L ++ E F L +LYI+I + N N T+ +FI D RD Sbjct: 121 IAPHARLNMRQILASSHSDLISLFIREGSFQELTKNLYIEIGERNANGTIGRLFIADQRD 180 Query: 181 TQTHKIYYAQSGSIDLD--RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 Q YYA G+I + + +ILNDGE+ R + ++SI+KF S+T N Sbjct: 181 PQLGLFYYATKGAIVNNKKGKFLILNDGEIERIDYKNDNVSIIKFSSHTFSLSEFIPNKK 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 T + D+ LS+L NPNPN+ +Y+ + L YR+E H+R T+ L+P++F LI ++A Sbjct: 241 TPNIYPKDRPLSYLFNPNPNDSHYQRKPL-QYRAELHRRFTECLYPIVFALI-VIAIAGD 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 A ++ +I F +++ S ++W + K E NP YIP+LY+ IS + M+ Sbjct: 299 AHSYRQARISATFSTITFSLLIYWLGYFFARKTENNPSYIPLLYIIPIGISLLIFFML 356 >gi|302383687|ref|YP_003819510.1| permease YjgP/YjgQ family protein [Brevundimonas subvibrioides ATCC 15264] gi|302194315|gb|ADL01887.1| permease YjgP/YjgQ family protein [Brevundimonas subvibrioides ATCC 15264] Length = 376 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 62/358 (17%), Positives = 140/358 (39%), Gaps = 4/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+ R I L +C + I + Q L ++ ++ +S+ +LLK++ +P + Sbjct: 1 MTLIQKYLFRQISLPVLAACASLAGIGILSQTLDQLEIIVERGQSVWVLLKLTLLAVPQL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + LT + R EL +G SR +I P +LA+ +++ + ++ + Sbjct: 61 FSVILPIGLFVGALIALTRLQREQELTAAYASGMSRWQMIAPGAWLAVCVAVVMLLTNVV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I+P + T ++ + + L +EE F + + L + + + N L+ +FI Sbjct: 121 IQPWSQRTAREQAFSIRTDLAALLVEEGRFVQGPNGLTVYVQQIEQNGLLKNLFIYIQNG 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSSTI 238 + +++ +D Q ++ ++ + + + F Y + I Sbjct: 181 DEVTTWDASEARFGRVDGQPVLTMKQGSWQQYSSAGVLQQLVFDGYVFPLGQYVTDDQKI 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 K D + L NP + +E H RL+ L+ + +++ A A Sbjct: 241 RYKPADLWMGQLFNPT-DALVRDTGSRGELLAEAHSRLSSPLYALTAMAMALTAILGGAF 299 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R I + V ++ N + Y+ +++ L ++ + Sbjct: 300 SRTGY-SARIAKASGAFLLVRVVGYAVVAASAWNGWLNVFQYVLPIVATAVALRLLFR 356 >gi|163743163|ref|ZP_02150545.1| hypothetical protein RG210_14720 [Phaeobacter gallaeciensis 2.10] gi|161383580|gb|EDQ07967.1| hypothetical protein RG210_14720 [Phaeobacter gallaeciensis 2.10] Length = 376 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 63/351 (17%), Positives = 128/351 (36%), Gaps = 5/351 (1%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 +L F L +V + W+ + + + + +S + L+ + +P ++ MV P Sbjct: 1 MLSQYLLFFGFFALILVAVFWINRAVVLFDRLIGDGQSALVFLEFTALALPNLVRMVLPV 60 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 + V +N +EL ++ TGTS + KP L ++ ++ + I +++ P + Sbjct: 61 AAFAASVWVTNRLNSESELTVLRATGTSPWQMAKPALVFGLITAVMMSILTHVLLPASIA 120 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 T++Q ++ +T L E F + I + +P+ TL +F+ D R+ Y Sbjct: 121 TLEQRESEVARNVTAKLLSEGDFLHPARGVTFYIGRIDPDGTLNDVFLSDRRNAAESVTY 180 Query: 188 YAQSGSIDLDRQAI--ILNDGEVHRKSPISKDISIMKFKSYTLQTESA--NSSTIVLKAN 243 + D + ++ DG R + ++ +S F ++ S + Sbjct: 181 TGGKAYLVRDGERTHLVMVDGMSQRINTETQRLSSTIFSDFSYDISSLANKAEEKTRNIR 240 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 LL P E H R + L V LI A R Sbjct: 241 AIPSLELLGDRAKLVADGPYSAGALAEELHLRFARALVCVAVVLIGFAALMLGGFSRFG- 299 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 ++ + V + + QN P++Y+ + L+ + Sbjct: 300 VWRQALLAFVLLIFVEGLRGVVSEPVLQNAELWPLIYIPTLIGLLVGLVFL 350 >gi|319404056|emb|CBI77644.1| putative permease, YjgP/YjgQ family [Bartonella rochalimae ATCC BAA-1498] Length = 382 Score = 143 bits (359), Expect = 4e-32, Method: Composition-based stats. Identities = 130/362 (35%), Positives = 205/362 (56%), Gaps = 6/362 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ FELYIL+ I F L V I+W +QIL R+N ++++ ++ +L S LIP+V Sbjct: 1 MRIFELYILKRIFILFSAVLLGAVGISWTVQILARVNFLTTNGQTFLTILYFSSLLIPSV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ PF + T +L +MN+++EL +I +G S+ + KP+L LAIL S F N Sbjct: 61 TSLIMPFALVVAITTILLTMNQDSELAVISASGISKNIVWKPILLLAILASFTSFSITNF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P R ++Q+ A + L ++ E F L +LYI+I + N N T+ +FI D RD Sbjct: 121 IAPHARLNMRQILASSHSDLISLFIREGSFQELTKNLYIEIGERNANGTIGRLFIADQRD 180 Query: 181 TQTHKIYYAQSGSIDLD--RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 Q YYA G+I + + +ILNDGE+ R + ++SI+KF S+T N Sbjct: 181 PQLGLFYYATKGAIVNNKKGKFLILNDGEIERIDYKNDNVSIIKFSSHTFSLSEFIPNKK 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 T + D+ LS+L NPNP++P+Y+ + L YR+E H+R T+ L+P++F LI+I A Sbjct: 241 TPNIYPKDRPLSYLFNPNPSDPHYQRKPL-QYRAELHRRFTECLYPIVFALIAIAIA-GD 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 A ++ +I F +++ S ++W + K E NP YIP+LY+ IS + M+ K Sbjct: 299 AHSYRQARISATFSTITFSLLIYWLGYFFARKTENNPSYIPLLYVIPIGISLLTFFMLLK 358 Query: 357 KY 358 Y Sbjct: 359 DY 360 >gi|154246777|ref|YP_001417735.1| permease YjgP/YjgQ family protein [Xanthobacter autotrophicus Py2] gi|154160862|gb|ABS68078.1| permease YjgP/YjgQ family protein [Xanthobacter autotrophicus Py2] Length = 405 Score = 143 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 82/385 (21%), Positives = 170/385 (44%), Gaps = 27/385 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI +FL + + + W Q L++++LV+S +++ + I+ +PT+ Sbjct: 1 MGRLDRYIFSTAAVAFLGVVVVLAGMIWATQALRQLDLVTSQGQTIIAFVAITSLTMPTL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + T L +N ++E++++ + G L++P++ LA+L+S F + Sbjct: 61 VLVIAPAALFIATAYTLLKLNGDSEIVVMASAGMGPWRLLRPLIILALLVSAFCALLAIK 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +T ++ K + + + F L L + + PN ++GIFI D+RD Sbjct: 121 VVPASLATFREQVTKVRADVVSFVAQPGRFVNLSQGLVFHVRERAPNGVMRGIFINDARD 180 Query: 181 TQTHKIYYAQSGSIDLD-RQAIILNDGEVHRK---------------------SPISKDI 218 + I+ D ++L +G + R+ S + Sbjct: 181 DGVSTYLADRGQIIESDAGIFLVLENGSIQRRGGAAKEAEKDASEANKDAGKDKGKSSNS 240 Query: 219 SIMKFKSYTLQTES--ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRL 276 S+++F+ Y S NS +K ++ LS+++NP P + Y YR E HKRL Sbjct: 241 SVVEFQRYAFDLSSLAPNSQGQDVKPMERPLSYVMNP-PQDDLYVRFFPGRYREELHKRL 299 Query: 277 TQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 + L+P+ F I+ A RQ ++ + + V G I +++ + Sbjct: 300 SAGLYPMAFFAIAAAALASPRTTRQS-QVAALGAIIPAMGLVQIGNFAIAGQLKTQAAAV 358 Query: 337 PILYLFLFCISSIFLLMIKKKYTKI 361 P++YL ++ M+ + + ++ Sbjct: 359 PLIYLLPIVTVALCA-MVVQGWIRL 382 >gi|254510429|ref|ZP_05122496.1| permease YjgP/YjgQ [Rhodobacteraceae bacterium KLH11] gi|221534140|gb|EEE37128.1| permease YjgP/YjgQ [Rhodobacteraceae bacterium KLH11] Length = 379 Score = 143 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 64/358 (17%), Positives = 129/358 (36%), Gaps = 5/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y LR + F L +V + W+ + + + V S +S + L+ + +PT+ Sbjct: 1 MSRFDGYFLRQLLVLFGFFTLVLVGVFWITRSVSLFDRVISGGQSAFVFLEFTALTLPTL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P ++R +E+ ++ TG+S L + VL + + + + Sbjct: 61 IRTVMPMAVFAAAVYATNRLSRESEMTVMLATGSSPWRLARAVLMFGLSAGLMMAVISVF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P ++Q A+ +T L E F D + + IS+ + + TL +F+ D RD Sbjct: 121 LRPASVERLEQRQAEVAGDVTAQLLNEGEFLHPADGVTVYISRIDLDGTLHEVFVSDRRD 180 Query: 181 TQTHKIYYAQSGSIDLD--RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA--NSS 236 T Y + + + +++ DG R +S F+ N+ Sbjct: 181 TVNPVSYSSTTAYLVNQASGIHLVMLDGVALRFDQQGNTLSSTLFEDAAYDVSELTNNTG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 T L+ L E H+R + + L+ Sbjct: 241 TDNRSREAIPTIELIRDRDTVAETDDHSLGQLVDELHQRFSWIAICIAVALVGYSTLMLG 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + R I + +I + ++ + ++P +LYL + L + Sbjct: 301 SFSRFG-LWPQILGAFTILVLLEGVRGFVSPVVIEDPRLWVLLYLPAILGVVVSGLFL 357 >gi|121602513|ref|YP_988823.1| YjgP/YjgQ permease [Bartonella bacilliformis KC583] gi|120614690|gb|ABM45291.1| putative permease, YjgP/YjgQ family [Bartonella bacilliformis KC583] Length = 396 Score = 143 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 126/364 (34%), Positives = 201/364 (55%), Gaps = 8/364 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYIL+ I F V I W +QIL RIN +++S ++ L S LIP+V Sbjct: 1 MRILELYILKRIFILFSAVITATVCIIWTVQILARINFLTTSGQTFLTALYFSSLLIPSV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V PF + L+ MN+++EL II +G + T+ KP+LFLAIL S F N Sbjct: 61 ISLVIPFALMIAIITTLSRMNQDSELTIISASGIPKTTIWKPILFLAILASCASFFITNF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ R ++++ A A L ++ E F +L ++LYI I + P+ T+ +FI D RD Sbjct: 121 VAPQARLHMREMLASAHSDLINLFIHEGSFQKLTNNLYIGIGERYPDGTIGRLFIADQRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAII--LNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + +YYA G+I ++ I LN+GE+ R + + +SI+KF SYT + Sbjct: 181 PKIDLLYYATKGAIVSNKSGNILVLNNGEIKRLNHQNDSVSIIKFSSYTFNLSEFIPNDR 240 Query: 239 VL--KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + D+ LS+L P+P++PNY+ + L Y++EFH+RLT+WL+P++F LI++ AA Sbjct: 241 IPTIYPKDRPLSYLYRPDPDDPNYQRQPL-QYKAEFHRRLTEWLYPIVFALIAVAAAGDA 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC--ISSIFLLMI 354 RQ + F ++ S ++ + + K E N YIP+LY+ I F L+I Sbjct: 300 RSYRQARISTTFF-AIIFSLLIYLVRYFFVEKTENNLAYIPLLYITPLGTSILIFFRLLI 358 Query: 355 KKKY 358 +K Sbjct: 359 NRKM 362 >gi|302342716|ref|YP_003807245.1| permease YjgP/YjgQ family protein [Desulfarculus baarsii DSM 2075] gi|301639329|gb|ADK84651.1| permease YjgP/YjgQ family protein [Desulfarculus baarsii DSM 2075] Length = 397 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 66/364 (18%), Positives = 132/364 (36%), Gaps = 15/364 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y+LR + F +S F+ + +I++ +LV S L+++ ++ Y +P Sbjct: 5 RIIHRYLLREMIGPFFISLGVFTFMLLIAKIMELTDLVVSRGVGLDVVGRLLLYTLPYFF 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + M+ + E++ + G S + PV LAI + Sbjct: 65 VFTIPMATLLGVLLAFLRMSGDMEVVALKAAGVSPYAFLPPVAVLAICAWLVTSALAFWG 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + L + A T L+E +F + I IS+ + +FIVD R+ Sbjct: 125 LPWGNHRFENLVFQVAKAQTDLALKERVFMDTFPGMVIYISRLPGQGQMTDLFIVDEREK 184 Query: 182 QTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 H A+ G I DR + L DG +H + F +Y + +++ S Sbjct: 185 GRHHTIVAKRGKIFPANNDRLILRLYDGTIHSVGQNLRSAQTAAFVTYDIAVDASTLSAA 244 Query: 239 VLKA----NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + + LL P + E HK+ + ++ LI + Sbjct: 245 HQRTTKHEKEMYFGELLAEMDKLPADSMQHY-LIEMEMHKKFSVPFACLVMALIGLPLGM 303 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI--LYLFLFCISSIFLL 352 + + + I+L + G + S + Y PI ++ + ++ + Sbjct: 304 HS----RGGRSWGVAIALVVFLGYYLMLSAAWS-FGKTGDYPPIVGMWAPNLLLGALAVE 358 Query: 353 MIKK 356 + ++ Sbjct: 359 LFRR 362 >gi|114704779|ref|ZP_01437687.1| hypothetical protein FP2506_07581 [Fulvimarina pelagi HTCC2506] gi|114539564|gb|EAU42684.1| hypothetical protein FP2506_07581 [Fulvimarina pelagi HTCC2506] Length = 398 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 85/360 (23%), Positives = 160/360 (44%), Gaps = 7/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E YI R S + S + + I W++Q L RI++V +S + +L I+ L+P + Sbjct: 1 MTLLERYIFRRALISSVGSLVSLALIVWIVQALSRIDIVKTSASAAGNILWIALMLLPDL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 V PF + VL +N ++E +I +G S +++P+++L + I + + Sbjct: 61 AAGVVPFAILIGAIQVLNGLNADSERAVIAASGASMRVILRPIIYLGLAGGILVLTVAHG 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P S + +L F R+ DL I + + + ++ +FI D+RD Sbjct: 121 IGPLASSAFYNGIRSINVDTITLFLRPGRFERVSPDLVISVGES-NGSIIESLFIQDTRD 179 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST- 237 Y+A SI D+ ++L DG++HRK +S+++F++Y + + Sbjct: 180 PNLDLTYFAAEASILDQGDQSVLMLFDGQLHRKPKTGNSVSVIEFQTYAFDLSNLRPADD 239 Query: 238 -IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + ++ + L+ P+P++ Y+ + Y E R T WL+ V F L +IV A + Sbjct: 240 GDWTRTSELSTLTLIAPDPDDEIYQKK-PGRYVEEATDRFTSWLYCVAFALWAIVCAGQP 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 RQ + + L+ + + + + NP +YL L+I + Sbjct: 299 QTNRQASN-AAMTLGLAGAVALKAVAFLALSMVSPNPSMAIFVYLLPIAACVFNALLIMR 357 >gi|322418227|ref|YP_004197450.1| permease YjgP/YjgQ family protein [Geobacter sp. M18] gi|320124614|gb|ADW12174.1| permease YjgP/YjgQ family protein [Geobacter sp. M18] Length = 387 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 66/359 (18%), Positives = 132/359 (36%), Gaps = 11/359 (3%) Query: 1 MKS-FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPT 59 MK YI I FL+ + F+ + + L+ +V +L++ YL+P+ Sbjct: 1 MKRTLYRYIFNEIPPPFLVGMVAFTFVLLMGRFLKLAEMVVEKGVPFTDVLRMVSYLLPS 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 P + ++ ++E+ + + G S L+ P L ++L S+ Sbjct: 61 FWLFTIPMALLLSILLAFGRLSGDSEVTAMKSCGISLYGLLPPPLVFSLLASLACLWVTV 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI-VDS 178 P S+ K+L + ++E +F D+ I + I D Sbjct: 121 YAVPWGNSSFKKLMLEIARNSASVSIKEKVFNNAFPDMVIYADTLDTKAQNMEGVIVHDE 180 Query: 179 RDTQTHKIYYAQSGSIDLDRQAI----ILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 RD + +A SG++ D +A L +G +HR S + +++F+ Y L+ A Sbjct: 181 RDPKAPTTIFAASGALFSDPKAHSMEFQLKNGSIHR-SEDGANYRMVQFQEYILRVALAE 239 Query: 235 SSTI-VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + KA++ + L++P + + R E H RL ++F + + Sbjct: 240 PTPKGPRKASEMTIDELVHPPQVAAA---KDVLARRLELHSRLALPFSCIVFTFVGVPLG 296 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 + + + + GF + K P+ LF ++ +L Sbjct: 297 IQNRRSGKASGFSLSIAVILCYYIALSGFDTLGEKALLPPFLSGWGPNLLFLLAGGYLF 355 >gi|158425949|ref|YP_001527241.1| putative permease precursor [Azorhizobium caulinodans ORS 571] gi|158332838|dbj|BAF90323.1| putative permease precursor [Azorhizobium caulinodans ORS 571] Length = 387 Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 70/360 (19%), Positives = 165/360 (45%), Gaps = 8/360 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI +F+ L + + W Q L++++LV+S +++ L I+ +PT+ Sbjct: 1 MGRLDRYIFSTSAVAFVGVTLVLTGMIWATQALRQLDLVTSQGQTILAFLAITSLTLPTL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + T+ L +N ++E++++ G S +++ ++ LA+L S+F Sbjct: 61 IMVIAPAALFIATSYTLLKLNGDSEIVVMAAAGMSPWRVLRSLMLLAVLASVFCSALSIH 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + + ++ + + + F L L + N + G+FI D+R+ Sbjct: 121 IVPASLRSFRDQVSRVRADVVSFVAQPGRFVNLAPGLVFHVRDRAKNGVMSGVFINDARE 180 Query: 181 TQTHKIYYAQSGSID-LDRQAIILNDGEVHRKSPI-SKDISIMKFKSYTLQTESANS--- 235 + + ++ + ++L +G +HR+ P + + S+++F+ Y + Sbjct: 181 KEVSTYVADRGQIVEADNGIFLVLENGSIHRRVPGAASNGSVVEFQRYAFDLSALTPGGS 240 Query: 236 -STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 S ++ N+++ +++ NP ++P Y +R E+HKRL+ L+P+ F I+ A Sbjct: 241 QSGADIRPNERSFAYISNPPKDDP-YMIVQPGRFREEYHKRLSAGLYPLAFFAIAAAAMA 299 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + R+ + + I + I + + ++ + +P +YL + L++ Sbjct: 300 RPRTTRESRGLALAAI-VPIMTALQIANFAVAGQLRTAAWAVPAIYLIPLLTIIVSALVL 358 >gi|84500989|ref|ZP_00999224.1| Predicted permease [Oceanicola batsensis HTCC2597] gi|84391056|gb|EAQ03474.1| Predicted permease [Oceanicola batsensis HTCC2597] Length = 385 Score = 139 bits (349), Expect = 6e-31, Method: Composition-based stats. Identities = 61/371 (16%), Positives = 133/371 (35%), Gaps = 11/371 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y+L F L +V I W+ Q ++ + + ++ + L+ + +P V Sbjct: 1 MARFDRYLLSQFMVLFGFFSLVLVSIYWINQAVRLFDALIGDGQTAWVFLEFTALTLPNV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V P V ++ +EL+++ +TG S L +PVL+ +++ + + + + Sbjct: 61 IRIVLPMATFAAVVYVTNRLSSESELVVMQSTGFSPWRLARPVLWFGVIVGLIMSVMSHF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P S +++ + LT L E F + I + + + TL+ +F D RD Sbjct: 121 LVPVSISRLQERQDDLRQDLTARLLTEGSFLHPVAGITFYIRQIDADGTLRDVFFSDRRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAI------ILNDGEVHRKSPISKDISIMKFKSYTLQTESA- 233 ++ + + A + ++ DG + + F+ +T Sbjct: 181 ARSPQTFTAARAYLIEGGGDDEGGAKLVMLDGLAQTLRAEDQRLFTTYFEDFTYDIGRLF 240 Query: 234 -NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + + L E H R Q L + LI Sbjct: 241 GDRGLPHVHIRHLPTLRLFAHPEQVATLTGSSPGQIAEEAHGRFAQALLCLAAALIGFST 300 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF-- 350 R I +++ + V + ++P P++Y+ I Sbjct: 301 LLTGGFSRFG-VWQQIVVAIVLVMIVKSIEGVASDPVRRDPSLWPLIYVAPLSGIGIGCV 359 Query: 351 LLMIKKKYTKI 361 +L I + +++ Sbjct: 360 MLWIASRGSRL 370 >gi|326408706|gb|ADZ65771.1| permease YjgP/YjgQ family protein [Brucella melitensis M28] gi|326538430|gb|ADZ86645.1| permease YjgP/YjgQ family protein [Brucella melitensis M5-90] Length = 388 Score = 139 bits (349), Expect = 7e-31, Method: Composition-based stats. Identities = 106/349 (30%), Positives = 196/349 (56%), Gaps = 8/349 (2%) Query: 16 FLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTN 75 F V I W +Q+LQRIN +++S ++ +++ S LIP+ +P+V PF + T Sbjct: 2 FFAVLGAAVGITWTVQVLQRINFLTTSGQTFQTIVQFSSLLIPSAIPLVMPFALIIAITQ 61 Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAK 135 L++MN+++EL++I+ +G R +++P+L LA +S+ F+ N +EP R ++ + A Sbjct: 62 TLSTMNQDSELVVINASGAPRSAVMRPILILAATVSVTSFLIANYVEPYARINMRAMIAN 121 Query: 136 AQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSI- 194 A L ++E F +L D+LYI+I++ + ++ G+FI DS D IYYA G+I Sbjct: 122 ASADLMHVIIQEGTFRKLADNLYIQIAERRADGSIGGLFIADSCDPTLDLIYYAADGAIA 181 Query: 195 -DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--STIVLKANDQNLSFLL 251 +++ +GEV R++ +SI+KF SY S V+ A D+ L++LL Sbjct: 182 STPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAGDDFVIFAKDRPLTYLL 241 Query: 252 NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFIS 311 NP+ N+P + L Y++E H+R TQW++P+IF +I++ A + ++ F + Sbjct: 242 NPDSNDPMLQTRPLT-YKAELHRRFTQWIYPLIFAMIALAIAGDSR-SHREARVSASFSA 299 Query: 312 LSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI--FLLMIKKKY 358 +S + V+W + + +++P YI ++YL + + F+L+ ++ Sbjct: 300 ISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFILLTGRRL 348 >gi|78222463|ref|YP_384210.1| permease YjgP/YjgQ [Geobacter metallireducens GS-15] gi|78193718|gb|ABB31485.1| permease YjgP/YjgQ [Geobacter metallireducens GS-15] Length = 418 Score = 139 bits (349), Expect = 8e-31, Method: Composition-based stats. Identities = 57/358 (15%), Positives = 126/358 (35%), Gaps = 6/358 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 YI + F++ F+ + ++L+ +V + + ++ Y++P+ L Sbjct: 32 SILFRYIFKETAVPFVLGMAVFTFVLLMGRLLKLAEMVFAKGVPFLDVCRLILYMLPSFL 91 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P F + ++ ++E+ + G +L+ PV A+L + Sbjct: 92 LVAIPMAFLLAVLLSFGRLSADSEVTAMKAGGVGLGSLLTPVFTFAVLAYLVTTFITVFA 151 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSRD 180 P ++ K+ + + + ++E +F L + I Y+ + + GI I D R+ Sbjct: 152 LPWGNTSFKRFLYEVIESRAATTIKEKVFIDDFPGLVVYIDDYDQTSHQISGILIHDERN 211 Query: 181 TQTHKIYYAQSGSI----DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 +A +G I + + L +G +HR +++F+SY L + ++ Sbjct: 212 PDEPMTIFASTGIIAAAPEEKNVRLHLVNGSIHRGIDPGG-YRLVEFRSYDLHVDLRQNA 270 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 L + N + E HKR ++F ++ + + Sbjct: 271 KKNQFDEQDMTLKQLIASRGNRQNNEKFRRDVSIELHKRFALPFACIVFAMVGVPLGIQN 330 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + I L + + V I K L F ++LL + Sbjct: 331 QRSGRAGGFSAGIIILMLYYVVMSAGKTIAEKEILPIPLAVWLPNVFFTAFGVYLLRL 388 >gi|146277168|ref|YP_001167327.1| permease YjgP/YjgQ family protein [Rhodobacter sphaeroides ATCC 17025] gi|145555409|gb|ABP70022.1| permease YjgP/YjgQ family protein [Rhodobacter sphaeroides ATCC 17025] Length = 376 Score = 138 bits (348), Expect = 8e-31, Method: Composition-based stats. Identities = 66/367 (17%), Positives = 138/367 (37%), Gaps = 7/367 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y+L + F L +V + W+ + + + + S +S + L+ S +P V Sbjct: 1 MSRFDRYLLSQLVALFGFFSLVLVLVYWINRAVGLFDDLISDGQSALVFLEFSLLALPNV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V P T ++ +++ +EL+++ TG S L +PV+ +++++ + + N+ Sbjct: 61 IRLVLPLSAFAATIYIVNRLSQESELVVMQATGFSAFRLARPVILFGLIVAMMMIVLMNL 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P R+T+ SA+ T +L + F + + I + + L + +VD RD Sbjct: 121 LVPASRATLSARSAEISENATARFLRDGEFLHPVRGVTLYIREISETGELNDLLLVDDRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAI--ILNDGEVHRKSPISKDISIMKFKSYTLQT--ESANSS 236 IY A+ + ++ DG + + + + +F T + Sbjct: 181 RARSTIYTARRALLVRTETTPRLLMIDGSAQTLTREGRRLELTRFADVTYDLGAFMKSDG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + LL P E H R+ Q + LI A Sbjct: 241 PKRRVLEELSTPDLLAPTEALLAETRSTRAAALYEGHSRIAQPFLGLASSLIGFAALLLG 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--FCISSIFLLMI 354 + R I ++ + V + P+ Y + I LL I Sbjct: 301 SFSRFG-LWWQILFAVVLLIVVQTINVAASGVGVTDEALWPLAYAAPVVGLLIGILLLWI 359 Query: 355 KKKYTKI 361 ++ ++ Sbjct: 360 AQRPRRL 366 >gi|299135068|ref|ZP_07028259.1| permease YjgP/YjgQ family protein [Afipia sp. 1NLS2] gi|298590045|gb|EFI50249.1| permease YjgP/YjgQ family protein [Afipia sp. 1NLS2] Length = 381 Score = 138 bits (348), Expect = 9e-31, Method: Composition-based stats. Identities = 75/353 (21%), Positives = 161/353 (45%), Gaps = 7/353 (1%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 ++R SFL+ + + + WV Q L+ I+L+++ +++ + L I+G IP + ++ P Sbjct: 1 MVRLTLLSFLIVLVSLTGVIWVTQALRGIDLMTAQGQTVLVFLGITGLAIPVLALIIAPL 60 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 + T+ L ++ ++E+++++ G S ++P + ++++ + + P+C Sbjct: 61 AMLLAVTHTLNRLSADSEVIVMNAAGLSPWRFLRPFMVSTVIVACLISFLAIFLAPECLR 120 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 +++ + + + L+ F RLD L +++ + P L G+FI D R+ Sbjct: 121 ALRRWHTEIGADVLANVLQPGQFIRLD-KLVLRVQERRPGGVLVGVFIDDQRNPAERINI 179 Query: 188 YAQSGSIDLDRQ--AIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN--SSTIVLKAN 243 AQ+G + + ++L+DG + R KD I+ FKSY + T A Sbjct: 180 TAQNGVVQKTDKGSFLVLSDGNLQRFQADKKDPLIVAFKSYAFDMSQFSQAPQTYNYNAR 239 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 ++ + L++P ++ + L +R+E H RL L+P +F +++ RQ + Sbjct: 240 ERFIGELISPPKDDAVAQ-RSLGQFRAELHDRLLAGLYPFVFVILAFAFLGPPRTTRQGR 298 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + + V G P I + Y L ++ + + MI K Sbjct: 299 NFA-VSALVLLVLVVRIGGYACSTIGVSRPGAIVVQYAMLMIVAGVSIWMILK 350 >gi|319898731|ref|YP_004158824.1| permease, YjgP/YjgQ family [Bartonella clarridgeiae 73] gi|319402695|emb|CBI76241.1| putative permease, YjgP/YjgQ family [Bartonella clarridgeiae 73] Length = 385 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 129/358 (36%), Positives = 199/358 (55%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYIL+ I F + + I+W +QIL RIN +++S ++ +L S LIP+V Sbjct: 1 MRILELYILKRIFLLFSAVMIGAIGISWTVQILARINFLTTSGQTFLTVLHFSSLLIPSV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +V PF + T +L++MN+++EL +I +G + + KP+L LAIL S+ F N Sbjct: 61 TSLVMPFGLVIAITIILSTMNQDSELAVISASGIPKNIIWKPILLLAILTSLTSFSITNF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P R ++Q+ A L ++ E F L +LYI+I + N N T+ +FI D RD Sbjct: 121 IAPNARLNMRQMLANTHSDLINLFIREGSFQELTKNLYIEIGETNTNGTIGRLFIADQRD 180 Query: 181 TQTHKIYYAQSGSIDLD--RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 Q YYA+ G I + +ILNDGE+ R + ++SI+KF S+T N Sbjct: 181 RQFGLFYYAKKGIIVNNKKGNFLILNDGEIERIDYKNDNVSIIKFSSHTFSLSEFITNKR 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 T + D+ LS+L NP+PN+P+Y+ + L YR+EFH+RLT+ L+P++F LI++ A Sbjct: 241 TPNIYPKDRPLSYLSNPDPNDPHYQRKPL-QYRAEFHRRLTECLYPIVFALIAVAIAGDA 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RQ F +S S ++W + K E NP YIP+LY+ IS + M+ Sbjct: 300 RSYRQTHISST-FSVISFSLLIYWLGYFFAKKTENNPVYIPLLYIIPIGISILTFFML 356 >gi|319405494|emb|CBI79113.1| conserved membrane hypothetical protein [Bartonella sp. AR 15-3] Length = 382 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 132/358 (36%), Positives = 199/358 (55%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ ELYIL+ I F L + I+W +QIL RIN +++S ++ +L S LIP+V Sbjct: 1 MRILELYILKRIFILFSAVMLGAIGISWTVQILARINFLTTSGQTFLTILYFSSLLIPSV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +V PF + T +L++MN++TEL +I +G S+ + KP+L LAIL S F N Sbjct: 61 TSLVIPFALVIAITIILSTMNQDTELAVISASGISKNIVWKPILLLAILASFTSFSITNF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P R ++Q+ A A L ++ E F L +LYI+I + N N T+ +FI D RD Sbjct: 121 IAPHARLNMRQMLANAHSDLISLFIREGSFQELAKNLYIEIGERNANGTIGRLFIADQRD 180 Query: 181 TQTHKIYYAQSGSIDLD--RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 Q YYA G+I + +ILNDGE+ R + ++SI+KF SYT N Sbjct: 181 HQLGLFYYAAKGAIVNNKKGNFLILNDGEIERIDYKNDNVSIIKFSSYTFSLSEFIPNKK 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 T + D+ LS+L NP+PN+P+Y+ + YR+EFH+R T+ L+P++F LI+IV Sbjct: 241 TPNIYPKDRPLSYLSNPSPNDPHYQRKPF-QYRAEFHRRFTECLYPIVFALIAIVIVGNA 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 RQ F +++ S ++W + K E NP YIP+LY+ I S+ M+ Sbjct: 300 RSYRQAHIFET-FSTITFSLLIYWLGYFFAQKAENNPSYIPLLYIIPIGICSLTFFML 356 >gi|89054305|ref|YP_509756.1| permease YjgP/YjgQ [Jannaschia sp. CCS1] gi|88863854|gb|ABD54731.1| permease YjgP/YjgQ [Jannaschia sp. CCS1] Length = 371 Score = 138 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 67/341 (19%), Positives = 132/341 (38%), Gaps = 4/341 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M ++ YILR + F L +V + WV Q + + + + +++ + L+ S +P + Sbjct: 1 MGQYDRYILRQLVALFGFFSLVLVSVYWVNQAARLFDRLIADGQNIGVFLEFSALTLPWI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + T + M +EL+++ G S + L++PV LL+I L + NI Sbjct: 61 VQLILPVSAFVATLYIFNRMISESELVVLQTAGLSALRLLRPVFVFGCLLAILLAVLVNI 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P R Q A+ Q LT +L F L + I + + + +F+ D+ Sbjct: 121 LAPTARGQFTQRQAEVQDDLTGRFLRAGEFIHPAAGLTVYIREISELGEFRDLFLQDAST 180 Query: 181 TQTHKIYYAQSGSIDLDRQAI--ILNDGEVHRKSPISKDISIMKFKSYTLQTESA-NSST 237 Y A + + ++ DG + +S + F +T + + Sbjct: 181 PGVEVTYTANTALLVRSDTGPRLVMFDGVAQTLDLDTGRLSTISFSDFTYSVGTLGGTGA 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + LL N L E H RL Q LF + LI+ + + Sbjct: 241 RQIDVRELPTPLLLRANQQIAGALNLPLSHLVFEGHDRLAQSLFVLFVPLIAAASLMLGS 300 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 R I I++++ + + + + P+ Sbjct: 301 FSRFG-VWKQILIAVALVLPMQIVRNASEAAVRADIEAWPM 340 >gi|221133510|ref|ZP_03559815.1| permease YjgP/YjgQ [Glaciecola sp. HTCC2999] Length = 389 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 47/364 (12%), Positives = 133/364 (36%), Gaps = 22/364 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+L+ +S ++ I ++ ++ + + ++++ P + Sbjct: 2 IIFRYLLKETFKSQFAIFFILMAIFITLRFVRVLGDATDGEIPASLVMGFLALYSPVLAS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + ++E+ ++ G S + + +L LA++L + + Sbjct: 62 LILPISFFLGIMMAHGRFYVDSEMTVLQACGVSEWYVTRVMLLLAVILGLLTASITMYVA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD----LYIKISKYNPNNTLQGIFIVDS 178 P + QL KA + + F + +D ++ N T + +++ Sbjct: 122 PLAVESEYQLREKAGSEAGIAAIIPGRFQQTGNDAAVIFVHEVESANNQLTKIFLSQINA 181 Query: 179 RDTQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + ++ Y+Q+G+I+ Q +IL +G+ + S ++ + F Y +Q Sbjct: 182 DQPKKVRVIYSQTGTIEVQSDGTQQLILRNGQQYDGSIGQQNYQRVNFDEYRIQIGEQKV 241 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 ++ K L+ + + +E R+ L LI++ Sbjct: 242 ESMRRKVAALPTLELI----------GDNSDEAIAELQWRIAIPLALPFLVLIAVPL--- 288 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLM 353 + ++ + +F ++ + G F + + P + + ++ + +L+ Sbjct: 289 SKVNPRQGRFGKLFPAILMYLGYFLLLMAARRALEDGKIPAGLGLWWVHGIILFIGTVLL 348 Query: 354 IKKK 357 +++ Sbjct: 349 SRQR 352 >gi|254465542|ref|ZP_05078953.1| permease YjgP/YjgQ [Rhodobacterales bacterium Y4I] gi|206686450|gb|EDZ46932.1| permease YjgP/YjgQ [Rhodobacterales bacterium Y4I] Length = 364 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 61/359 (16%), Positives = 128/359 (35%), Gaps = 7/359 (1%) Query: 9 LRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFC 68 + F L +V + WV + + + + + +S + L+ + +P ++ MV P Sbjct: 1 MSQYLLFFGFFALILVAVFWVNRAVVLFDTLIGNGQSALVFLEFTALTLPNLIRMVLPIA 60 Query: 69 FAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRST 128 V +N +EL ++ TGTS + +P L I+ ++ + + + P + Sbjct: 61 AFGAAVWVTNRLNSESELTVLRATGTSPWQMARPALAFGIITALMMSALTHYLLPASINQ 120 Query: 129 IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYY 188 +++ ++ +T L E F + + I + +P+ TL +F+ D RD Y Sbjct: 121 LEERESEVSRNITAKLLSEGDFLHPAEGVTFYIRQIDPDGTLNDVFLSDRRDPAVTVTYT 180 Query: 189 AQSGSIDLDR--QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA--NSSTIVLKAND 244 + D +I+ +G R ++ +S F ++ + + Sbjct: 181 GTRAFLVRDEGSAHLIMVEGMAQRLDNETQRMSTTFFSDFSYDISALARKAENPARNIRA 240 Query: 245 QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKK 304 L+ E H R + L V LI A R Sbjct: 241 IPSLELMTSTEAVTRTDGYSAGAQAEELHLRFARALVCVAVALIGFSALMLGTFSRFG-V 299 Query: 305 IHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS--IFLLMIKKKYTKI 361 F++ + V + + NP P++YL + + L++ + +I Sbjct: 300 WRQAFLAFVVLIFVEGLRGVVSEPVLDNPGLWPLIYLPTLLGLAVSLIFLILASRPKRI 358 >gi|78186277|ref|YP_374320.1| hypothetical protein Plut_0389 [Chlorobium luteolum DSM 273] gi|78166179|gb|ABB23277.1| conserved hypothetical protein [Chlorobium luteolum DSM 273] Length = 360 Score = 137 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 54/362 (14%), Positives = 124/362 (34%), Gaps = 7/362 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI R ++F+ + L V + +I +++ ++ + + + + IP Sbjct: 1 MKILDRYIFRQFVKTFIFTSLAFVALFMLIHMVENLDDFMDKNQGFEAIAQYYLFAIPQT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + +P + V + ++EL I + G S L+ P L +++S + Sbjct: 61 ILITSPVSSLLAAILVAGKLAVSSELPAIRSAGVSMGQLLYPFLLGGMIISTINLTNSFW 120 Query: 121 IEPKC---RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD 177 I P + + Q + + S ++ + + I Sbjct: 121 IAPAATLRNNNFELTELGHQRRDEEGGNSNLHILEPGNRIITLGSLNPDMSSAREVSIEQ 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 A + +++A +L + S+ L + + Sbjct: 181 FSQKGIVSRSDADGMRYNPEKKAWVLENAAERMFEDGSERFWTEPMLPVQLHLSLQSLAE 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L+ ++ N++ + LE + H +L+ +I +I + A Sbjct: 241 LNLRPDEMNIARHWQYLSEKKHAGFAGLERSSVKLHTKLSLPFASLIIIIIGVPL---SA 297 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 ++ I ISL F +F G I N P+L +L + + + + + Sbjct: 298 KKKRGGLAAEIGISLFAGF-LFLGLQKTIATFGYNGVMPPMLAAWLPNLLFLGVGYVIYR 356 Query: 358 YT 359 Y+ Sbjct: 357 YS 358 >gi|159043739|ref|YP_001532533.1| permease YjgP/YjgQ family protein [Dinoroseobacter shibae DFL 12] gi|157911499|gb|ABV92932.1| permease YjgP/YjgQ family protein [Dinoroseobacter shibae DFL 12] Length = 380 Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats. Identities = 53/343 (15%), Positives = 125/343 (36%), Gaps = 4/343 (1%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ YIL + +F L IV I W+ + ++ +S + L + ++S +P ++ Sbjct: 4 RYDRYILGRLMVTFGFFTLIIVLIYWINRSIRLFERLSGDGQGLALFAQLSLLSLPYLIY 63 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + M ++E + + G S +++P L++ ++ + + + +++ Sbjct: 64 LMLPLAAFASAVSTGNRMGSDSETVALQAAGISAFRIVRPALYMGVMAAALMLLLAHLLV 123 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P R I L + ++ LE F D + + +++ L + + D RD Sbjct: 124 PMSRVAIADLEEQLADEVSARLLEPGKFQSPIDGVTVFVAEITGEGVLSKVLLSDQRDPA 183 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVH-RKSPISKDISIMKFKSYTLQTE--SANSSTIV 239 IY A + L + +S ++F+ + L ++ Sbjct: 184 EEVIYTANQALLVRSDTGPQLVMISGLAQFLRADGTLSTLQFEDFALGLGEVEVPEDRVL 243 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + + LL +P + + + SE H+RL + L+ A Sbjct: 244 RDLRGWDTARLLRADPADLESVGKSRGAFLSEAHRRLANPALAISTALLGFSALLVGGFS 303 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 R + ++ + + + + P+LY Sbjct: 304 RFG-FWQQVAGAILALIVIQLSVNMSEEIAQSDAAAWPVLYAP 345 >gi|254453241|ref|ZP_05066678.1| permease YjgP/YjgQ family protein [Octadecabacter antarcticus 238] gi|198267647|gb|EDY91917.1| permease YjgP/YjgQ family protein [Octadecabacter antarcticus 238] Length = 372 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 61/352 (17%), Positives = 132/352 (37%), Gaps = 5/352 (1%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 +L + F L +V I W+ + ++ + + + +S + L+++ +P+++ +V P Sbjct: 1 MLGQLLVFFGFFSLILVLIYWINRAVRLFDRLIADGQSAWVFLELTSLSLPSLIRIVLPL 60 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 + V M+ ++EL ++ TG S L +PV+ +++++ + I NI+ P Sbjct: 61 SAFVAAVYVTNRMSSDSELTVVQATGYSPFRLARPVIVFGVIVAVLMSILTNILVPLSTE 120 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 + A+ +T L F DD+ I + P + IFI +S Y Sbjct: 121 RLITRQAEIAQTMTARLLTPGEFLTPTDDVTFYIRELPPGGEMLDIFISESTSPTQRTTY 180 Query: 188 YAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA--N 243 A + + +++ DG + + + +F+ + + + V K N Sbjct: 181 TASRAYLVRTENGPQLVMVDGLTQTLNLETSRLLTTRFEDFVYNVSALMNDDPVRKTSVN 240 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 + LL P+ + + + H R+ Q + GL+ A R Sbjct: 241 GLSTMALLRPSAETIADTNQTGDQLKLRGHDRIAQAALGFVAGLVGFSALVVGGFSRFG- 299 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 I ++ + + N P +YL I +++ Sbjct: 300 LWRNIIFAVGLVILLKLLEGTGTSIATTNAALWPFVYLAGIGGVVISAMLLH 351 >gi|312897532|ref|ZP_07756952.1| conserved hypothetical protein [Megasphaera micronuciformis F0359] gi|310621384|gb|EFQ04924.1| conserved hypothetical protein [Megasphaera micronuciformis F0359] Length = 364 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 44/367 (11%), Positives = 117/367 (31%), Gaps = 15/367 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQIL-QRINLVSSSTESLNILLKISGYLIPT 59 M+ + YIL+ FL + L + NL++ S+ +I +P+ Sbjct: 1 MRILDKYILKEFIGPFLFGVCAFTSVFVGTGTLYRIANLINQYGASMWAAFRILVLALPS 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ + P + + M+ +E++++ + G + L P+ A+ +S+ Sbjct: 61 IIVITFPMSVLLGSLMAFGRMSAASEIIVMRSGGQNFPRLAMPIFITALCISLGTTAFNE 120 Query: 120 IIEPKCRSTIKQLSAKAQL---ALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + PK + ++ + T + D + ++ + + Sbjct: 121 FVVPKANNAYNRIINEEVKAGAQPTTQDHIILKNVKGSDISSLMYARQYDGQEKRLKDLT 180 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK----DISIMKFKSYTLQTES 232 ++ + D I++ G ++ S + ++ + + Sbjct: 181 VQEFDNDVLTRVEKADYAEWDGDKWIMHKGIIYDLSGGDEQQVTRTMTFNHQTLPISQKP 240 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + K ++ + L + + E R + L ++ L+ Sbjct: 241 NKMAESQKKPDELTIREL-KEQIKVLDNNSVDTNKMKVELFNRFSMPLASLVCALVGAPL 299 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--FCISSIF 350 ++ IS+ + F +++ I + + P + FL Sbjct: 300 GL---QKQRGSSSIGFGISVIVIF-IYYSIMTISNALGNGGRIPPYVAAFLPDVITGIAG 355 Query: 351 LLMIKKK 357 + +I KK Sbjct: 356 IWLIYKK 362 >gi|86609823|ref|YP_478585.1| YjgP/YjgQ family protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558365|gb|ABD03322.1| putative membrane protein, YjgP/YjgQ family [Synechococcus sp. JA-2-3B'a(2-13)] Length = 400 Score = 136 bits (341), Expect = 5e-30, Method: Composition-based stats. Identities = 58/375 (15%), Positives = 129/375 (34%), Gaps = 25/375 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y+L + FL + V + + + LV + SL+ L++ P ++ Sbjct: 27 LMDRYVLSEMLLPFLFGVGAFTTLVMAVGSLFELVRLVVEAGLSLSAALQVFVLRAPGII 86 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + T ++ + E+ + G S L+ P L L++L++ F+ ++ Sbjct: 87 VLTFPMSMLLATLLAYGRLSADNEITALRGCGVSLYRLMVPALVLSLLVTTLTFLFNELV 146 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLY---------------IKISKYNP 166 P +A E L+ + L ++ Sbjct: 147 VPVSNRQAATTLNRALNRDPDFRRENILYQEFGEILMPEPDGTFSRRQGLTRQFYARSFD 206 Query: 167 NNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSY 226 ++GI ++D + ++I AQ G D + DG + SP +I F Sbjct: 207 GKQMRGIIVLDFSNEALNQILLAQRGRWDPQENLWVFEDGTNYIVSPDGTYSNIATFSRQ 266 Query: 227 TLQTE--SANSSTIVLKANDQNLSFLLNPNPNNPNYRP-ELLETYRSEFHKRLTQWLFPV 283 L+ + + + N+ L + + + + + +++ + Sbjct: 267 ELRLPRAPLELAQEIRSPEEMNIRELKHYIEVIASSGDLQRVRRLQVSLNQKYAIPFACL 326 Query: 284 IFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 F LI + + + + IS+ I F F+ +I + Q P +L Sbjct: 327 AFTLIGVPLGLRPQ---RTGSSLGLGISVLIIFA-FYVLLFITQALGQIGTLGPATAAWL 382 Query: 344 --FCISSIFLLMIKK 356 F + + L ++ + Sbjct: 383 PNFICAVVGLGLLHR 397 >gi|114799726|ref|YP_760969.1| putative permease [Hyphomonas neptunium ATCC 15444] gi|114739900|gb|ABI78025.1| putative permease [Hyphomonas neptunium ATCC 15444] Length = 380 Score = 136 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 61/363 (16%), Positives = 144/363 (39%), Gaps = 4/363 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M +L++LR + ++ L+ +V +A + Q L R +++ + +S I P V Sbjct: 1 MTKIQLHLLRQVLQAVLIIVGSLVMVALLAQGLSRTDVILENRQSAITYFYIVMLGSPQV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + L +++++E+++ G +R + PVL LA++ + Sbjct: 61 IALLLPLALFVAGVWSLNRIHKDSEIVVAQAAGMTRWQVASPVLRLAMVCLVVHLGVNLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 ++P + +++ A+A+ L + F + L + + Sbjct: 121 VQPMSQRAMREAVAEARADLAAALFRAGQFTSNGERLTFYARDQVGGELRGVLISDMTDP 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSSTI 238 I + + +D Q +L + ++ ++ +S+++F Y S + Sbjct: 181 EFPMDILARSAALVSVDGQPTLLLRDALSQQLDENQQLSVLEFDQYMFDLSDFMKEDSEL 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 VLKA+D+ L L+ + N + +++ +E + RLT + ++ L++I A Sbjct: 241 VLKASDKFLHELIFLDRKNYFEN-KEADSFLAEANARLTSPMLNIVMALLAIFAVLGGDF 299 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 RQ I ++ + V + +P L++ I + + Sbjct: 300 SRQGY-AKRIGLATGGAIFVLVLHLALQSAAADDPALNIALWVVPILAGIILGWIYFGRG 358 Query: 359 TKI 361 +I Sbjct: 359 ARI 361 >gi|158521442|ref|YP_001529312.1| permease YjgP/YjgQ family protein [Desulfococcus oleovorans Hxd3] gi|158510268|gb|ABW67235.1| permease YjgP/YjgQ family protein [Desulfococcus oleovorans Hxd3] Length = 391 Score = 136 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 59/358 (16%), Positives = 133/358 (37%), Gaps = 10/358 (2%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI+ + F +S + Q+L N + + L +++ + Y P L Sbjct: 6 IDRYIMAELVPVFGVSLAVFTLVFLTHQLLDITNFIVNYGTGLGVVMLMLVYSTPYFLVY 65 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 V P M M+ + E++ + ++G S L PV+ + + + P Sbjct: 66 VIPISTMMAVLLTFLRMSGDNEIVALKSSGVSLYRLFYPVMGFCVAACLLTLLMTLWGLP 125 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTL-QGIFIVDSRDTQ 182 + + KQL+ + + + F L + + + + +++ + +FI D R Sbjct: 126 RGKVAFKQLAYTVVTSNPNLGIVDREFNTLFNGITLYVGQFDKKQRVLSDVFIEDQRSAG 185 Query: 183 THKIYYAQSGSIDLDRQAII----LNDGEVHRKSPISKDISIMKFKSYTLQTESAN---- 234 A SG++D+D + L DG +++ + +++F++Y + + Sbjct: 186 KPVTICAPSGTLDVDMVGQVVRLSLADGRMYQVDLRDRSSRVIRFETYDIHLDLERAGQV 245 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 +ST + +L+ L + + R E HK+ + V+ GL+++ Sbjct: 246 ASTAARSEKEMSLAELFDHIQKAGAA-GLPRGSARMELHKKFSIPFACVVLGLLAVPLGV 304 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 + + I + + + V G + +P L + +FL Sbjct: 305 QARGRKTSSGIGLALVFFLLYYLVLSGGEILGESGFLHPALAMWLPDMVMGGLGLFLY 362 >gi|83594275|ref|YP_428027.1| permease YjgP/YjgQ [Rhodospirillum rubrum ATCC 11170] gi|83577189|gb|ABC23740.1| permease YjgP/YjgQ [Rhodospirillum rubrum ATCC 11170] Length = 396 Score = 136 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 59/370 (15%), Positives = 147/370 (39%), Gaps = 15/370 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + YILR + + + ++ + W+I L+ ++ + S+ L+++ L+P L Sbjct: 5 TLHRYILRNLLVGLAVGSVALIVLIWLINSLKFLDWFVNKGLSVATFLRLTLLLMPGFLT 64 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + + EL+++ G L +P L L +L+ + + Sbjct: 65 VFIPIALFAVVLFTYNRLAADRELIVMRAAGMGPWQLARPALALCAVLTGVGYWLTLSVV 124 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + + + + ++ ++E F ++ D L + + + L + I D+ Sbjct: 125 PAMEGAFEAIKYEVRGEVSSLVIKEGQFNQMKDGLIVYAGERAKDGRLIDLMIHDTTGKT 184 Query: 183 THKIYYAQSGSIDLDRQ--AIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST--I 238 + A+SG++ + + I+L +G ++ + ++ + F SY + +ST Sbjct: 185 SDLTVMAESGALVREGEGARILLINGNRQERNRQTGKVNFLYFDSYAVDLGGKAASTEMR 244 Query: 239 VLKANDQNLSFLLNPNPNNPN-------YRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 + ++ LS L++ + Y + R E H RL + L + F LI + Sbjct: 245 FREERERPLSELISLKAGDRIDPDYPFTYEERHIRRMRMEAHLRLLRPLAHIGFLLIGLA 304 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN---PYYIPILYLFLFCISS 348 A R+ + +++++ G +++ + ++ L + Sbjct: 305 AVLTGEFDRRGGN-KRVILAVALVVLFQAGSLGAATVAKKSLDGLLLLDLMTLLPILVGW 363 Query: 349 IFLLMIKKKY 358 I+L+ +++ Sbjct: 364 IWLVWPSERW 373 >gi|92115033|ref|YP_574961.1| permease YjgP/YjgQ [Chromohalobacter salexigens DSM 3043] gi|91798123|gb|ABE60262.1| permease YjgP/YjgQ [Chromohalobacter salexigens DSM 3043] Length = 386 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 46/368 (12%), Positives = 121/368 (32%), Gaps = 23/368 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R I + ++ + + ++ + +IL + Y +P + Sbjct: 28 IVFRYLTREILATMAAVAGVLLLVIMGSRFIRYFGDAAQGDIPASILGTLMLYHLPGFME 87 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P F + + N+E+ ++ G S L++ L+ A+L+++ + + + Sbjct: 88 LVLPLSFFLGILLAFGQLYLNSEITVLVACGISPNRLLRVTLWPALLVALLVALCSLWLT 147 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + + + + L FS L+ F N + + + R + Sbjct: 148 PNGARHNEMVLEEQKSRLDFSVLQPGRFQEFGSGRTAYTESLNDDRSRMESVFISERQPR 207 Query: 183 T----HKIYYAQSGSID-----LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 + + G + ++L DGE + P + ++F +Y ++ A Sbjct: 208 SDGTPETVVTRADGGYQTVDDDTGSRFLVLTDGERYSVEPGNHVAERVQFDTYAVRLSQA 267 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + + A + LL + RL+ L I L+++ Sbjct: 268 SERVDLQAAELTSTPQLLE----------RGGSEAWANLQWRLSMPLMVPILTLLALPL- 316 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFLL 352 + ++ + + ++ + I + I ++ + + Sbjct: 317 --SRVNPRQGRFAKLLPAIFLHISYLSLLLAAQDAIARGSLAPTIGMWPIHLGYLLLGVW 374 Query: 353 MIKKKYTK 360 M ++ + Sbjct: 375 MTRRDQRR 382 >gi|77919518|ref|YP_357333.1| hypothetical protein Pcar_1922 [Pelobacter carbinolicus DSM 2380] gi|77545601|gb|ABA89163.1| conserved hypothetical membrane protein [Pelobacter carbinolicus DSM 2380] Length = 418 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 62/363 (17%), Positives = 133/363 (36%), Gaps = 13/363 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y+LR L+ + + +IL + LV + L +L + YL+PT L Sbjct: 32 RIQRYLLRETLVPMLLGLAVFTLVLLLGRILNLVELVINKGVPLVDVLLLLAYLLPTFLV 91 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P F + M+ + E+L + G L P++ L +L+S+ + I+ Sbjct: 92 LTLPLSFLLGVMAGFGRMSADREILALKACGVGLRQLTAPIVGLGLLVSLATAATTIAIK 151 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSRDT 181 P ++ + ++ +F + + + + + + +QG+FI D RD Sbjct: 152 PASEDLFREKLFHIASSRANIGIQAQIFNDEFEGIILYANDVDERSGRMQGVFISDERDD 211 Query: 182 QTHKIYYAQSGSIDLDRQ----AIILNDGEVHRKSPISKD-ISIMKFKSYTLQTESANSS 236 I A G I +++ + L +G +HR+ + +++F Y L + +S Sbjct: 212 TLSSIILANEGRIFSNQENLTLTLHLENGTIHRQRRETGSGFQVIEFTRYDLNLDLGQTS 271 Query: 237 TIVLKAN----DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + L L + P +EFH RL + P++F L+ + Sbjct: 272 MSADQPRKNKKTMTLGELYQAIRPDAATPPSKKRELLAEFHWRLAVPVIPLLFALLGVPL 331 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 + + L + + S + I++ ++ Sbjct: 332 GIQPVRSGRGS---GFAAGLLVFLAYYVLLSLAGTLVVDAGLPGLIMWGPNSIFLLASIV 388 Query: 353 MIK 355 +++ Sbjct: 389 VLR 391 >gi|39997020|ref|NP_952971.1| hypothetical protein GSU1922 [Geobacter sulfurreducens PCA] gi|39983908|gb|AAR35298.1| membrane protein, putative [Geobacter sulfurreducens PCA] Length = 399 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 124/347 (35%), Gaps = 10/347 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI F + F+ + ++L+ +V + + ++ Y++P+ Sbjct: 14 RLLFRYICTETAVPFALGLTVFTFVLLMGRLLKLAEMVFARGVPFLDVTRLILYMLPSFF 73 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P F + + ++ ++E+ + +G S T+ PV+ ++ Sbjct: 74 LVAIPMAFLLAVLLAMGRLSADSEVTAMKASGMSIGTIAVPVIAFGVITYAATTFVSVYA 133 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSRD 180 P + K+ + E +F L I + ++P + + GI I D R+ Sbjct: 134 LPWGNTAFKKFLHGVIETRAAMSITEKVFNDEFPGLVIYVDGFDPKSGRISGILIHDERN 193 Query: 181 TQTHKIYYAQSGSIDLDRQAII----LNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 +A SG + + + I LN+G +HR + +++F SY L Sbjct: 194 PDEPSTIFAASGQLATNPEERIVRLRLNNGGIHRG-IGTGGYRLVEFTSYDLSIALQREQ 252 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L +P +P+L+ E HKR V+F +I++ + Sbjct: 253 QKARLNEEDMTLGELLARMKSPGEQPKLVREMHFELHKRFALPFACVVFAVIAVPLGIQN 312 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 + F + I +++ + + + +++ Sbjct: 313 QRSGRAGG----FAAGIILLMLYYILMSAGKTVNEKGIAPAFVAVWI 355 >gi|315500012|ref|YP_004088815.1| permease yjgp/yjgq family protein [Asticcacaulis excentricus CB 48] gi|315418024|gb|ADU14664.1| permease YjgP/YjgQ family protein [Asticcacaulis excentricus CB 48] Length = 384 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 73/362 (20%), Positives = 143/362 (39%), Gaps = 8/362 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M++ E YI R + L + + IA + Q L + +++ +SL+ LKI+ +P + Sbjct: 1 MRTIEGYISRQMRTPILGAIAALTAIAILSQSLTQFDVIVERGQSLSTFLKITFLALPQL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + T L M+ + E++ G S + PV+ + +++ + Sbjct: 61 SGLIFPVAIFVGTLVALNRMHNDHEIVAGYANGMSLWRIASPVVRFGVYITLMGLLMTLF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I+P +++ K + + + + E F + I + + + + L+ IFI Sbjct: 121 IQPAASRAMREELFKIKTDVIAAAVREGDFSTTPSGMTIYVQRIDQSGLLRQIFIRTPGP 180 Query: 181 TQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + Y A+ G + Q +IL DG + SP ++ + F Y+ S Sbjct: 181 HGLDRTYLAREGRVITPVKGGQVLILRDGSTQQLSPEG-VLNHLTFAEYSFDISQYVISE 239 Query: 238 --IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + K +D+ L PN +E H R++ L+ + F L++IV Sbjct: 240 DYLHFKDSDRFPHELFFPNRAMEWENG-NWTKLMAEGHARISGPLYNLGFCLLAIVGVLG 298 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 A RQ +S I+ G+ I P + Y+ + + L +I Sbjct: 299 GAFSRQGYGRRIATVSF-IAAGLRIVGFAIEAGCANTPVLNIMQYVVPVALIWVCLSIIH 357 Query: 356 KK 357 K Sbjct: 358 KN 359 >gi|16125936|ref|NP_420500.1| hypothetical protein CC_1691 [Caulobacter crescentus CB15] gi|221234699|ref|YP_002517135.1| hypothetical protein CCNA_01762 [Caulobacter crescentus NA1000] gi|13423102|gb|AAK23668.1| conserved hypothetical protein [Caulobacter crescentus CB15] gi|220963871|gb|ACL95227.1| hypothetical membrane spanning protein [Caulobacter crescentus NA1000] Length = 379 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 58/361 (16%), Positives = 136/361 (37%), Gaps = 7/361 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ E Y+ R + L++ +V +A + + L +++ +S + LKI +P + Sbjct: 1 MRLIERYLFRQLLGPTLLATAALVALALLARSLSEFDVLVEQRQSALVFLKIILLALPQL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + L ++ E+++ G SR +I P + LA++ ++ IS Sbjct: 61 LGIMMPLALFVAALVALNRLHTEQEIVVCFAGGMSRWRVISPAMRLAVIAALISLISGLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 ++P I++ + + + + + ++ F L + + +N +Q +FI Sbjct: 121 LQPWSARQIRETAFQIKTDVAATLVQPGQFTEPGPGLTVYAQSIDRDNKIQNLFIHQELP 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA--NSS 236 Y ++ I +I+ G + S + F YT S + Sbjct: 181 NGAASTYSSREAEIATRKGEPVLIMRHGSNQQFSRDG-VLQYTSFDEYTFDLSSLFHSDE 239 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + K D+ L P+ + + +E H R L+ + +++ A Sbjct: 240 LLHYKIADRYPHELFFPDLTQ-EWEQRNKDKLLAEGHSRFAGPLYNIALMSMALAAVLGG 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + R + + + V + E +P+ + Y+ ++ + I + Sbjct: 299 SFSRMGYGKRIAAVG-AAAAIVRIVGFGVQAACEDDPWLNVLQYIVPLAATAWAMSQIFR 357 Query: 357 K 357 + Sbjct: 358 Q 358 >gi|149914658|ref|ZP_01903188.1| 4-hydroxythreonine-4-phosphate dehydrogenase [Roseobacter sp. AzwK-3b] gi|149811451|gb|EDM71286.1| 4-hydroxythreonine-4-phosphate dehydrogenase [Roseobacter sp. AzwK-3b] Length = 380 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 53/353 (15%), Positives = 131/353 (37%), Gaps = 6/353 (1%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 +L F L +V I W+ + ++ + + + + L+ + +P V+ ++ P Sbjct: 1 MLSQFMVLFGFFALVLVSIFWINKAVRMFDRLIGDGQPAWVFLEFTALTLPGVIGVILPM 60 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 T V ++ +EL ++ TG S L++PV+ IL+++ + + + + P S Sbjct: 61 AAFAATVYVTNRLSTESELTVVQATGYSPWRLMRPVIVFGILIALMMSLLTHFLIPSSLS 120 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 ++ + +T L E F + I P+ L +F+ D RD++ Y Sbjct: 121 QLRLRQDEVSQNITAKLLTEGEFLHPAPGITFYIRDITPDGELHNVFMSDRRDSENTMTY 180 Query: 188 YAQSGSIDLD---RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA--NSSTIVLKA 242 + + D +++ DG + F ++ + + +T + K Sbjct: 181 TSNRAYLIQDPEGGTKLLMVDGLAQTVRRDGNRLFTTHFNDFSYDISALIASEATSLDKV 240 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + + + + E + R +Q L ++ +I + R Sbjct: 241 TFAHTLDIARDPRAVADRTLSTVSQVIFELNNRFSQPLLCIVAAVIGFASLLLGGFSRFG 300 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 I ++ ++ + S + + + P++YL + + +++ Sbjct: 301 -VWRQILLAFTLLIVIKLVESRVSGLVLAHSDLWPLMYLPAALGALVTAVLLH 352 >gi|298506037|gb|ADI84760.1| membrane protein, YjgP-related [Geobacter sulfurreducens KN400] Length = 388 Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 124/347 (35%), Gaps = 10/347 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI F + F+ + ++L+ +V + + ++ Y++P+ Sbjct: 3 RLLFRYICTETAVPFALGLTVFTFVLLMGRLLKLAEMVFARGVPFLDVTRLILYMLPSFF 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P F + + ++ ++E+ + +G S T+ PV+ ++ Sbjct: 63 LVAIPMAFLLAVLLAMGRLSADSEVTAMKASGMSIGTIAVPVIAFGVITYAATTFVSVYA 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSRD 180 P + K+ + E +F L I + ++P + + GI I D R+ Sbjct: 123 LPWGNTAFKKFLHGVIETRAAMSITEKVFNDEFPGLVIYVDGFDPKSGRISGILIHDERN 182 Query: 181 TQTHKIYYAQSGSIDLDRQAII----LNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 +A SG + + + I LN+G +HR + +++F SY L Sbjct: 183 PDEPSTIFAASGQLATNPEERIVRLRLNNGGIHRG-IGTGGYRLVEFTSYDLSIALQREQ 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L +P +P+L+ E HKR V+F +I++ + Sbjct: 242 QKARLNEEDMTLGELLARMKSPGEQPKLVREMHFELHKRFALPFACVVFAVIAVPLGIQN 301 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 + F + I +++ + + + +++ Sbjct: 302 QRSGRAGG----FAAGIILLMLYYILMSAGKTVNEKGIAPAFVAVWI 344 >gi|218672884|ref|ZP_03522553.1| putative permease protein [Rhizobium etli GR56] Length = 380 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 117/322 (36%), Positives = 198/322 (61%), Gaps = 5/322 (1%) Query: 16 FLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTN 75 FL++ L ++ I W Q+LQRINLV+ S +S+ K++ ++P+++P+V PF + T Sbjct: 3 FLVALLPVLAIIWTTQVLQRINLVTDSGQSIGSFAKLATMILPSIIPVVLPFALVIAITQ 62 Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAK 135 LT+MN ++EL +ID G R LI+P+L LA ++S+F F +NI+EP+ ++ +Q+ A+ Sbjct: 63 TLTTMNNDSELTVIDAAGARRSILIRPILLLAAVISVFSFFVDNIVEPRAKTVARQMIAE 122 Query: 136 AQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSID 195 L S +EE F ++D+ LY++ISK L+G+F+ D RD IYYA+ G++D Sbjct: 123 TYADLLSSVIEEKTFRKIDEGLYVQISKRLAGRMLKGLFVADERDPAYELIYYAKEGAVD 182 Query: 196 LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE--SANSSTIVLKANDQNLSFLLNP 253 +I++DGEVHRK+P ++S++ F SY+ + N LKA+D++L FL NP Sbjct: 183 DTGTTLIMHDGEVHRKTPDG-NVSVINFDSYSFDLSDMTENRGQATLKASDRDLWFLFNP 241 Query: 254 NPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLS 313 +PN+ ++ ++YR+E H+RLT W+ PV+F L S+ A + ++HP+ +L+ Sbjct: 242 DPNDKDFTIR-PQSYRAELHRRLTDWILPVVFALFSLAIAGDAR-SHREARLHPMVSALA 299 Query: 314 ISFGVFWGFSYIIHKIEQNPYY 335 +F W Y ++I+ +P Sbjct: 300 YAFAFRWAAFYAANQIDTDPGI 321 >gi|148265754|ref|YP_001232460.1| permease YjgP/YjgQ family protein [Geobacter uraniireducens Rf4] gi|146399254|gb|ABQ27887.1| permease YjgP/YjgQ family protein [Geobacter uraniireducens Rf4] Length = 389 Score = 133 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 73/356 (20%), Positives = 141/356 (39%), Gaps = 6/356 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K+ LYI + I FL+ F+ + ++L+ +V + L +L++ YL+P+ L Sbjct: 3 KTLYLYIFKEIPPPFLLGVATFTFVLLMGRLLRLAEMVVTKGVPLADVLRMVFYLLPSFL 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P F + ++ ++E+ + +G S L+ PV A++ + Sbjct: 63 LVTIPMAFLLAILLAFGRLSGDSEITAMKASGVSLYGLLPPVFCFALIAYLAGAFITVYA 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSRD 180 P ++ K+L + A ++E +F L I +YN T+ GI I D RD Sbjct: 123 VPWGNTSFKKLLVEVVEARASLGIKEKIFNDDFPGLVIYTDRYNQQKQTMSGILIQDERD 182 Query: 181 TQTHKIYYAQSGSIDLDRQAI----ILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 YA+SG I+ D L++G +HR + +++F++Y L ++ Sbjct: 183 PLEPSTIYARSGVINSDPATKSIRLRLDNGSIHR-TQGKTGYRLVEFRNYDLNINLNQAA 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V K L N + + +++ R E+H+R + +IF L+ + + Sbjct: 242 QTVNKNELDMSLAELRANLASGRFDAKMMRDMRLEYHRRFSLPFACLIFALVGMPLGIQN 301 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 + L + V + + +P LF I+L Sbjct: 302 QRSGKAAGFTMSIGLLLAYYIVLSAGKALGERELLSPLLAVWAPNLLFVSLGIYLF 357 >gi|258645769|ref|ZP_05733238.1| membrane protein, YjgP/YjgQ family [Dialister invisus DSM 15470] gi|260403140|gb|EEW96687.1| membrane protein, YjgP/YjgQ family [Dialister invisus DSM 15470] Length = 361 Score = 133 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 45/362 (12%), Positives = 109/362 (30%), Gaps = 10/362 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQ-ILQRINLVSSSTESLNILLKISGYLIPT 59 M+ + YIL+ FL I +L+ + V+ S LKI +P Sbjct: 1 MRILDKYILKEFLGPFLFGVAAFTAIFLGADTLLKIADYVTKYGASSTAALKIFILALPR 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ P + + ++ ++EL+++ +G S L+ P+ L L+S+ Sbjct: 61 IIVYTFPMAVLLGALMATSRLSGSSELIVMRTSGQSFSRLVMPIFILTFLISLCAVAFNE 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEEN---LFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + P +Q+ + ++ + ++ ++ + I Sbjct: 121 YVVPWTNRKYEQVINIEIKRNLNPGVTDHVILRDVQNGKIAHLLYARRYNPENKKLENIT 180 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPIS-KDISIMKFKSYTLQTESANS 235 I + + + +G ++ K + Sbjct: 181 IQEFQNEAVIRVENAPNAVWKDGKWFMENGTIYDLGEDGISRTMRFKNQFIPYGQSPETI 240 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 ++ + L E E H+R + +FGL+ + Sbjct: 241 QKEHKDYDEMTIRELFTARKAYEAA-HEDATAIVMEIHRRFSLPFASFVFGLVGAPLGVQ 299 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI-EQNPYYIPILYLFLFCISSIFLLMI 354 R + +S+ I F + +++ + ++L + +I Sbjct: 300 RE---RSSSSIGFGLSVVIIFVYYAVMTFLEALGKGHVISAVAAVWLPNLIALICAVYLI 356 Query: 355 KK 356 K+ Sbjct: 357 KR 358 >gi|197119769|ref|YP_002140196.1| membrane protein [Geobacter bemidjiensis Bem] gi|197089129|gb|ACH40400.1| membrane protein, YjgP-related protein [Geobacter bemidjiensis Bem] Length = 391 Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats. Identities = 64/363 (17%), Positives = 135/363 (37%), Gaps = 17/363 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K+ YI + I FL+ + F+ + + L+ +V + ++++ YL+P Sbjct: 7 KTLYAYIFKEIPTPFLVGMVTFTFVLLMGRFLKLAEMVVEKGIPFSDVVRMVAYLLPPFW 66 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + ++ ++E+ + + G S L+ P + A ++ Sbjct: 67 LFTIPMALLLAMLLAFGRLSGDSEITAMKSCGISLYGLLPPPMLFAACATLACLWVTVYA 126 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI-VDSRD 180 P S K+L + + ++E +F + + + G I D RD Sbjct: 127 VPWGNSGFKKLMVEIAQSSAGIAIKEKIFNNAFPGMVVYTQSLDTKAQTMGGVIVHDERD 186 Query: 181 TQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESAN-S 235 +T +A +G++ D ++ L +G +HR +++F+ Y L+ A+ S Sbjct: 187 PRTPTTIFASTGALVSDPKSNSMEFQLRNGSIHRAEEQGG-YRMVQFQEYNLRVALADGS 245 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + K ++ L LL+P + E+H RL +F L++I Sbjct: 246 NKATRKVSEMTLDELLHPPKGTQQKEIISRD---LEYHSRLALPFSCFVFTLLAIPLGI- 301 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF---LFCISSIFLL 352 R+ K +S+ + + S + + P+L + L + + L Sbjct: 302 --QNRRSGKAAGFSLSIGVILLYYVTLSAF-DTLGERGTLPPLLAGWSPNLIFLLAGAYL 358 Query: 353 MIK 355 K Sbjct: 359 FKK 361 >gi|90419502|ref|ZP_01227412.1| possible permease [Aurantimonas manganoxydans SI85-9A1] gi|90336439|gb|EAS50180.1| possible permease [Aurantimonas manganoxydans SI85-9A1] Length = 392 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 82/362 (22%), Positives = 171/362 (47%), Gaps = 7/362 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E YI + S +V I W++Q L RI++V +S + + + I+ L+P + Sbjct: 1 MTILERYIFKRAFVYAASSLTSLVLIVWIVQALSRIDVVKTSASAASNIFWIALMLLPDL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 V PF + L S+N ++E +I G S+ + +P++ L +L + + + N+ Sbjct: 61 FAGVLPFALLIGAIQALNSLNSDSERAVISAAGASQAVIARPIVALGLLGGLIMLLIGNV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P S + + +L+ F ++ D + I I T++ + I D+RD Sbjct: 121 VGPASMSAFQNGIRSINADMITLFLKPGRFEQVQDGIVISIGDV-NGATVESLVIADTRD 179 Query: 181 TQTHKIYYAQSGSIDLDRQAI--ILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST- 237 + Y+A+ I + + +L DG++HR++ +S+++F++Y + +T Sbjct: 180 PASDLTYFAREAKIIDEDASSLLLLFDGQLHRRNTADNSVSVIQFQTYAFDLAALRPATD 239 Query: 238 -IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 ++A++++ + L+ P+PN+ Y+ ++ E R+T WLF + F L +IV A + Sbjct: 240 NSWVRASERSTAALIWPDPNDGLYQER-PHSFTEELTDRMTNWLFAIAFVLWAIVVAGQP 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + RQ + + L + + +IEQ +++ I YL + ++I + Sbjct: 299 STNRQG-TGPAMTVGLCGGLVLKAAGFVTLSQIEQGVFWVVISYLLPLAAIVLNSVLIWR 357 Query: 357 KY 358 + Sbjct: 358 NF 359 >gi|221639315|ref|YP_002525577.1| permease Yjgp/YjgQ family protein [Rhodobacter sphaeroides KD131] gi|221160096|gb|ACM01076.1| Permease YjgP/YjgQ family protein [Rhodobacter sphaeroides KD131] Length = 364 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 64/352 (18%), Positives = 130/352 (36%), Gaps = 7/352 (1%) Query: 16 FLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTN 75 F L +V + W+ + + + + S +S + L+ S +P V+ +V P T Sbjct: 4 FGFFSLVLVLVYWINRAVGLFDDLISDGQSALVFLEFSLLALPNVIRLVLPLSAFAATIY 63 Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAK 135 V+ +++ +EL+++ TG S L +PV++ +++++ + + N++ P R+T+ SA+ Sbjct: 64 VVNRLSQESELVVMQATGFSAFRLARPVIWFGLIVALMMIVLMNLLVPASRATLSARSAE 123 Query: 136 AQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSID 195 T +L + F D + + I + L+ + +VD RD Y A+ + Sbjct: 124 ISQNATARFLRDGEFLHPADGVTLYIREVTETGELRDLLLVDDRDPARSTAYTARRALLV 183 Query: 196 LDRQAI--ILNDGEVHRKSPISKDISIMKFKSYTLQT--ESANSSTIVLKANDQNLSFLL 251 ++ DG + + + + +F T S + LL Sbjct: 184 RTDTTPKLLMIDGSAQTLTREGRRLELTRFDDVTYDLGAFMTGSGPKRRVLEELPTMTLL 243 Query: 252 NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFIS 311 P + E H R+ Q LI A + R I + Sbjct: 244 APTADVLEETRSTRAAALYEGHSRIGQPFLGFASSLIGFAALLLGSFSRFG-LWWQILFA 302 Query: 312 LSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF--CISSIFLLMIKKKYTKI 361 + + V + P+ Y I LL I ++ ++ Sbjct: 303 VLLLIVVQTINVAASGVGVTDEQLWPLAYAAPVTGFAIGILLLWIGQRPRRL 354 >gi|56751017|ref|YP_171718.1| hypothetical protein syc1008_d [Synechococcus elongatus PCC 6301] gi|81299323|ref|YP_399531.1| hypothetical protein Synpcc7942_0512 [Synechococcus elongatus PCC 7942] gi|56685976|dbj|BAD79198.1| hypothetical protein YCF84 [Synechococcus elongatus PCC 6301] gi|81168204|gb|ABB56544.1| conserved hypothetical protein YCF84 [Synechococcus elongatus PCC 7942] Length = 394 Score = 132 bits (331), Expect = 8e-29, Method: Composition-based stats. Identities = 54/370 (14%), Positives = 127/370 (34%), Gaps = 14/370 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQIL-QRINLVSSSTESLNILLKISGYLIPTV 60 + YILR + FL + I ++ + + V+ + L++ ++ +P Sbjct: 28 SIMDRYILREMLGPFLFGVGAFTSVGLSIGVVFELVRQVTEAGLPLSVAAQVFLLKMPDF 87 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + ++ ++EL+ + + G S I P + ++I+++ F Sbjct: 88 LVLAFPMSMLLSALMAYNRLSSDSELIALRSCGISSYRFILPGILMSIVVTGMTFAFYES 147 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL------YIKISKYNPNNTLQGIF 174 + P + A E+N D I ++ ++G+ Sbjct: 148 VVPAANFQAQVTLQTALNQTRPQLEEKNNIVYQQFDRKTSELARIFYARRYDGEQMRGLT 207 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 I+D + +I A++G Q +G ++ +P I FKS Sbjct: 208 ILDFTRGELSQIISAETGVWHPGDQLWEFRNGTIYGVAPDGSYSGIATFKSQEFTIPETP 267 Query: 235 SSTIVLKAND-QNLSFLLNPNPNNPNYRPE--LLETYRSEFHKRLTQWLFPVIFGLISIV 291 S ++ Q + + + + ++L V FGLI Sbjct: 268 LSIASQSRDETQMNATQIWQYLRVLRQTNNTADIRKWEVRLQQKLALPFVCVAFGLIGAS 327 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 ++ + IS+ I F ++ +++ + N +L + + + + Sbjct: 328 LGTAP--NQRTGRATGFGISVLIIFS-YYLLAFVTGALGINGTLPTLLAGWFPWLLGMGV 384 Query: 352 -LMIKKKYTK 360 L + ++ + Sbjct: 385 GLYLLRQTAR 394 >gi|332558334|ref|ZP_08412656.1| permease [Rhodobacter sphaeroides WS8N] gi|332276046|gb|EGJ21361.1| permease [Rhodobacter sphaeroides WS8N] Length = 364 Score = 132 bits (331), Expect = 9e-29, Method: Composition-based stats. Identities = 64/352 (18%), Positives = 129/352 (36%), Gaps = 7/352 (1%) Query: 16 FLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTN 75 F L +V + W+ + + + + S +S + L+ S +P V+ +V P T Sbjct: 4 FGFFSLVLVLVYWINRAVGLFDDLISDGQSALVFLEFSLLALPNVIRLVLPLSAFAATIY 63 Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAK 135 V+ +++ +EL+++ TG S L +PV++ +++++ + + N++ P R+T+ SA+ Sbjct: 64 VVNRLSQESELVVMQATGFSAFRLARPVIWFGLIVALMMIVLMNLLVPASRATLSARSAE 123 Query: 136 AQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSID 195 T +L + F D + + I + L+ + +VD RD Y A+ + Sbjct: 124 ISQNATARFLRDGEFLHPADGVTLYIREVTETGELRDLLLVDDRDPARSTAYTARRALLV 183 Query: 196 LDRQAI--ILNDGEVHRKSPISKDISIMKFKSYTLQT--ESANSSTIVLKANDQNLSFLL 251 ++ DG + + + + +F T S + LL Sbjct: 184 RTDTTPKLLMIDGSAQTLTREGRRLELTRFDDVTYDLGAFMTGSGPKRRVLEELPTMTLL 243 Query: 252 NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFIS 311 P E H R+ Q LI A + R I + Sbjct: 244 APTAEVLEETRSTRAAALYEGHSRIGQPFLGFASSLIGFAALLLGSFSRFG-LWWQILFA 302 Query: 312 LSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF--CISSIFLLMIKKKYTKI 361 + + V + P+ Y I LL I ++ ++ Sbjct: 303 VLLLIVVQTINVAASGVGVTDEQLWPLAYAAPVTGFAIGILLLWIGQRPRRL 354 >gi|126725340|ref|ZP_01741182.1| Predicted permease [Rhodobacterales bacterium HTCC2150] gi|126704544|gb|EBA03635.1| Predicted permease [Rhodobacterales bacterium HTCC2150] Length = 367 Score = 132 bits (331), Expect = 9e-29, Method: Composition-based stats. Identities = 60/351 (17%), Positives = 137/351 (39%), Gaps = 5/351 (1%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 +L + +F +V + WV + + + S + + L+ + +P V+ +V P Sbjct: 1 MLSQLTVTFGFFAFILVAVYWVNRAIVLFEDLISDGHTALVFLEFTALALPNVILLVLPV 60 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 + + V + +E++++ + G S L+ P L + + + + I +I+ P R+ Sbjct: 61 AGFVASIYVANRLISESEMVVMQSAGHSAKRLMVPALIFGVGIFVMMSILSHILVPISRT 120 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 + + + +T +L F +DL I + +++ L+ I + D R IY Sbjct: 121 ALAEREGELSQDVTTQFLNAGRFVHPSNDLTIYVREFSETGELRDILLTDDRSANIQTIY 180 Query: 188 YAQSGSIDLDRQAI--ILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSSTIVLKAN 243 A + ++ G+ + + +S + F T + +S VL Sbjct: 181 TANRAFLIKTETGPRLVMLSGQTQTLNRTTDRLSFVTFTELTYDLSALIPSSKERVLNMR 240 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 + LL + + + ++++ H R ++ L +I L+ + R Sbjct: 241 ELFTPALLRGDQADLDRTNSTTAIFKAQAHGRFSKPLLGMILPLLGVAVMLVGGFNR-MG 299 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 I S I V F+ + NP P++YL + ++ +++ Sbjct: 300 VSRQILASAVIIILVQMLFNAGENAAISNPTMWPMIYLPIVFAVALLWMLL 350 >gi|288572984|ref|ZP_06391341.1| permease YjgP/YjgQ family protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288568725|gb|EFC90282.1| permease YjgP/YjgQ family protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 365 Score = 132 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 62/358 (17%), Positives = 138/358 (38%), Gaps = 14/358 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRI-NLVSSSTESLNILLKISGYLIPTV 60 + + +IL+ +G SFL L I +L +I +++ SL+ +LK+ Y +P+V Sbjct: 4 RILDRFILKELGSSFLFGVLTFTVILVAGDLLFKIADMLIEKGVSLSTVLKLFVYKLPSV 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + T ++ N+E++ + +G S + +PVL A L++I F Sbjct: 64 VVLTLPMSCLLSTLLSFGRLSSNSEIVALKASGISFQRIARPVLLGASLVAISAFFMNET 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLD-----DDLYIKISKYNPNNTLQGIFI 175 + P + + + + L E +F + + + + +++ + + Sbjct: 124 VVPIANRAAENILMYDVVKQKPTLLRERMFLKDESGGKLNRVIYVGRLRTRKGSMENVLV 183 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSY--TLQTESA 233 + D + +I A G+ L+DG+ K + FK L A Sbjct: 184 QEFDDGRLSRITTADEGNW--SDGVWTLSDGKAFSVDKEGKVGFLFGFKEQRLPLNLTPA 241 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + LK ++ +LS L + + L +H + ++ LI Sbjct: 242 QVARSSLKPDEMSLSQL-REHIEIMKAQGANLIPLWVSYHLHIAIPWASLVLALIGAALG 300 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + R+ +S+ I F + S + + ++ + P++ +L + + Sbjct: 301 VRP--QRRGGMGVGFGLSVLIVFAYYVVMS-MGRALGESGHIPPLVAAWLANVVFLGF 355 >gi|220932597|ref|YP_002509505.1| permease YjgP/YjgQ family protein [Halothermothrix orenii H 168] gi|219993907|gb|ACL70510.1| permease YjgP/YjgQ family protein [Halothermothrix orenii H 168] Length = 1040 Score = 132 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 63/361 (17%), Positives = 138/361 (38%), Gaps = 2/361 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + ++YI++ + FL+ I I + Q +L+ + ++LK+ Y +P ++ Sbjct: 8 RIIDVYIIKEVLYPFLIGVSIIGVIMLSGLLRQLSDLIIIKKIPVAVVLKLLLYQLPEII 67 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P T + + +NR E + G S LI P+L L I++S ++ I Sbjct: 68 VQTFPIAILFATMSGMGRLNRENEFTALRMGGISLYRLILPLLILGIVISGMTYLLNEEI 127 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + + K+ L ++EN+FF+ D + +++ + + +V + Sbjct: 128 VPWTKHRAQNIIRKSVLKEVPPDIKENVFFKGPDGRLFYVGRFDKEDNIMKKIVVYTFKG 187 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI-VL 240 + ++ ++ +L G +HR + +F ++ + + Sbjct: 188 DNGYPLIVTANLGEVYKEKWVLKKGFIHRYNGEGHLTMETRFDVMEIKINTEVHNFFADQ 247 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K D+ L + + + ++H +L+ L +IF LI + R Sbjct: 248 KTPDEMSREELKKEIDLFQNSGIDVHSLLVDYHLKLSMPLAALIFILIGTPLSLTSKDSR 307 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 I I + F + S+ +P L +F I I LL+ ++ + Sbjct: 308 SFSIIFTIVVVFLYYFVMSLSRSF-GRNGRLDPVLAAWLPNIIFSIIGITLLIWRESWRN 366 Query: 361 I 361 + Sbjct: 367 L 367 >gi|86605895|ref|YP_474658.1| YjgP/YjgQ permease [Synechococcus sp. JA-3-3Ab] gi|86554437|gb|ABC99395.1| putative permease, YjgP/YjgQ family [Synechococcus sp. JA-3-3Ab] Length = 400 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 51/374 (13%), Positives = 118/374 (31%), Gaps = 19/374 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI+ + F + V + + + LV + SL+ L++ P ++ Sbjct: 27 LMDRYIISEMLLPFFFGVGAFTTLVMAVGSLFELVRLVVEAGLSLSAALQVFVLRAPGII 86 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + T ++ + E+ + G S L+ P L L++L++ F+ ++ Sbjct: 87 VLTFPMSMLLATLLAYGRLSADNEITALRGCGVSLYRLVVPALLLSLLVTTLTFLFNELV 146 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL---------------YIKISKYNP 166 P +A E L+ + L ++ Sbjct: 147 VPVSNRQAALTLNRALNRTPEFRRENILYQEFGEILAPEPDGTFSRRQGLTRQFYARSFD 206 Query: 167 NNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSY 226 ++G+ ++D + +I AQ G D + +G + SP +I F Sbjct: 207 GQQMRGVIVLDLSNEALSQILLAQQGRWDPQENLWVFEEGTNYIVSPDGTYSNIATFARQ 266 Query: 227 TLQTE--SANSSTIVLKANDQNLSFLLNPNPNNPNYRP-ELLETYRSEFHKRLTQWLFPV 283 L+ + + V + N+ L + + + + ++ + Sbjct: 267 ELRLPRAPLDLAQEVRSPEEMNIQELRRYIEVIASSGDLQGVRRLQVSLSQKYAIPFACL 326 Query: 284 IFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 F LI A + + + + + + + + P L F+ Sbjct: 327 AFTLIGAPLALRPQRTSSSLGLGLSVLIIFAYYVLLFVSQALGQIGTLGPEVAAWLPNFI 386 Query: 344 FCISSIFLLMIKKK 357 + LL + Sbjct: 387 CSAVGLGLLYRANR 400 >gi|17231561|ref|NP_488109.1| hypothetical protein alr4069 [Nostoc sp. PCC 7120] gi|17133204|dbj|BAB75768.1| alr4069 [Nostoc sp. PCC 7120] Length = 371 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 47/375 (12%), Positives = 129/375 (34%), Gaps = 22/375 (5%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQIL-QRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y+ + +FL I I + + + V S ++I +++ +P + Sbjct: 1 MDRYLTSELLPTFLFGVGAFSSIGVTIDAVFELVRRVVESGLPVSIAVQVFLLKLPNFIV 60 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + T + ++ +EL+ + G S ++ + L+ +++ F+ I Sbjct: 61 LAFPMSTLLATLMTYSRLSSESELIALRGCGVSVYRMVMTAVMLSFVVTGLTFLFNEQIA 120 Query: 123 PKCRSTIK------------QLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTL 170 P + + ++E + + + + Sbjct: 121 PAANYQATLTLDKALKSDKPTFKQQNIFYPEYRDIQEKDGTKNRILTRLFYADQFDGKRM 180 Query: 171 QGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT 230 +G+ I+D ++I A+S + + +G ++ +P +I++F+ L+ Sbjct: 181 KGLTIIDRSTDGLNQIVVAESAEWNGAQSIWDFYNGTIYLVAPDRSYRNILRFEKQQLKL 240 Query: 231 --ESANSSTIVLKANDQNLSF-LLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGL 287 + + + N++ L N + + ++ V+FGL Sbjct: 241 PRTPLSLAEQSRDYGEMNIAQALDQLNIERLGGDRQKIRKLEVRIQQKFALPFVCVVFGL 300 Query: 288 ISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFC 345 + + K IS+ + F ++ +I + Q + P + +L F Sbjct: 301 VGAAMGTIPQ---RTGKGTSFGISVIVIFS-YYLLGFITGALGQAGIFSPFIGAWLPNFI 356 Query: 346 ISSIFLLMIKKKYTK 360 + + ++ + + Sbjct: 357 GLGVGIFLLVRVAQR 371 >gi|282856200|ref|ZP_06265483.1| putative membrane protein, YjgP/YjgQ family [Pyramidobacter piscolens W5455] gi|282585959|gb|EFB91244.1| putative membrane protein, YjgP/YjgQ family [Pyramidobacter piscolens W5455] Length = 368 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 59/368 (16%), Positives = 131/368 (35%), Gaps = 13/368 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRI-NLVSSSTESLNILLKISGYLIPTV 60 ++ + +I+R + FL + I +L ++ +L+ SL + ++ Y +P+V Sbjct: 5 RTLDRFIMRELMGPFLFGVMAFTLIMVAGGLLFKLADLIIEQGVSLGVAGRLFIYELPSV 64 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + + + M+ N+E++ + G S + +PVL A+ +++ Sbjct: 65 VVLTLPMSCLLASLLGFSKMSANSEIVALKAAGISFSRIGRPVLVAALGVTMLSLALNET 124 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISK-----YNPNNTLQGIFI 175 + P + + + + L+E +F R D + + + + Sbjct: 125 VVPLGKIAAQNVMRYEVAREKPALLKEQVFLRSSDPSSEGLRRIVYINKLYARSGTMDDV 184 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSY--TLQTESA 233 V + + L+DG+V + FK ++ Sbjct: 185 VVQEFKGADLVRLTTARKGTWVDGVWYLDDGDVFEVKGRDTVELTLHFKRQALPIRLTPQ 244 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 S K +D + L+ + + LE FH RL VI LI Sbjct: 245 QISRSTAKPDDMSCLELI-KYIEILRAQGKSLEPLWVAFHLRLAVPWACVILALIGAALG 303 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF-CISSIFLL 352 + R+ S+ I F V++ + + Q + P+L +L + L Sbjct: 304 VRPM--RKGGASVGFGQSILIVF-VYYVVMSMGRSLGQAGHIPPVLGAWLPNILFFAGAL 360 Query: 353 MIKKKYTK 360 ++ ++ + Sbjct: 361 LLARRADR 368 >gi|37522902|ref|NP_926279.1| hypothetical protein gvip459 [Gloeobacter violaceus PCC 7421] gi|35213904|dbj|BAC91274.1| ycf84 [Gloeobacter violaceus PCC 7421] Length = 384 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 46/372 (12%), Positives = 136/372 (36%), Gaps = 20/372 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPT 59 +K +LY++ + FL + V + + + + + S+ + ++ +P+ Sbjct: 14 LKIVDLYLVSELLLPFLFGVATFASLGMIVGSLFELVRAMLDNGLSVTVAAQVFALRLPS 73 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 V+ + P + T ++ + E + + G S L+ P L + +L++ F+ Sbjct: 74 VIVITFPTAMLLATLLAYARLSGDAETVAMRACGMSVYRLVLPALAVGLLVTGATFMCNE 133 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLY-------------IKISKYNP 166 ++ P + +L +A + ++N+ + + + ++ Sbjct: 134 LVVPASNAEASRLLFQAIDRDKPDFQKDNIIYPEYGFVTPRDGRPTYHTLVRLFYARQFA 193 Query: 167 NNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSY 226 ++ + ++D +++ A + D + L DG V+ +P ++++FK Sbjct: 194 GGIMRELTVLDYSQDAINQVITAAAAVYDNRSGSWTLQDGTVYVVAPDGSYRNVLRFKRQ 253 Query: 227 TLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFG 286 ++ + L+ + + T + ++ + +F Sbjct: 254 QVKLSERPEQFGGGARPEDLPIAQLSDYIRRLELSQQQVRTLQVSLQQKYAIPVTCFVFA 313 Query: 287 LISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLF 344 L+ +R + + +S+ I FG ++ ++ + Q P L + Sbjct: 314 LVGATLGLRRV---RTSNALGLGLSILIIFG-YYLLMFVAQALGQTGVIAPWLGAWAPNL 369 Query: 345 CISSIFLLMIKK 356 ++ +L++ + Sbjct: 370 ATGALGVLLLWR 381 >gi|75907859|ref|YP_322155.1| permease YjgP/YjgQ [Anabaena variabilis ATCC 29413] gi|75701584|gb|ABA21260.1| permease YjgP/YjgQ [Anabaena variabilis ATCC 29413] Length = 391 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 48/377 (12%), Positives = 131/377 (34%), Gaps = 22/377 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQIL-QRINLVSSSTESLNILLKISGYLIPTV 60 + Y+ + +FL I I + + + V S ++I +++ +P Sbjct: 19 TIMDRYLTSELLPTFLFGVGAFSSIGVTIDAVFELVRRVVESGLPVSIAVQVFLLKLPNF 78 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + T + ++ +EL+ + G S ++ + L+ +++ F+ Sbjct: 79 IVLAFPMSTLLATLMTYSRLSSESELIALRGCGVSVYRMVMTAVMLSFVVTGLTFLFNEQ 138 Query: 121 IEPKCRSTIK------------QLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN 168 I P +L + + ++E + + + Sbjct: 139 IAPAANYQATLTLDKALKSDKPKLKQQNIFYPEYRDIQEKDGTKNRILTRLFYADQFDGK 198 Query: 169 TLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 ++G+ I+D ++I A+S + + +G ++ +P +I++F+ L Sbjct: 199 QMKGLTIIDRSTDGLNQIVVAESAEWNGAQSIWDFYNGTIYLVAPDRSYRNILRFEKQQL 258 Query: 229 QT--ESANSSTIVLKANDQNLSF-LLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIF 285 + + + + N++ L N + + ++ V+F Sbjct: 259 KLPRTPLSLAEQSRDYGEMNIAQALDQLNIERLGGDRQKIRKLEVRIQQKFALPFVCVVF 318 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFL 343 GL+ + K IS+ + F ++ +I + Q + P + +L Sbjct: 319 GLVGAAMGTIPQ---RTGKGTSFGISVIVIFS-YYLLGFITGALGQAGVFSPFIGAWLPN 374 Query: 344 FCISSIFLLMIKKKYTK 360 F + + ++ + + Sbjct: 375 FIGLGVGIFLLVRVAQR 391 >gi|167622903|ref|YP_001673197.1| permease YjgP/YjgQ family protein [Shewanella halifaxensis HAW-EB4] gi|167352925|gb|ABZ75538.1| permease YjgP/YjgQ family protein [Shewanella halifaxensis HAW-EB4] Length = 371 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 58/365 (15%), Positives = 133/365 (36%), Gaps = 23/365 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R + ++ + L ++ I ++ + S ++++ + G +P + Sbjct: 2 IVFRYLIREVFKAQIAVLLVLLAIFISQHFVRVLADASDGEFPASLVMTLLGLNMPFLTV 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + M E++I G S + + L LA++ +F + Sbjct: 62 LVLPLSLFLGILLAHGRMYAENEMVIFHGVGISEWYITRVTLLLAVMNMVFTAFLSIYVA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI-----VD 177 P Q+ AQ + L + F + + + + Sbjct: 122 PWAEERQNQVLEHAQSEAGLAALTQGRFQTSPNGRAVLFVERIGRDNQLDKVFVAQLPEP 181 Query: 178 SRDTQTHKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 +T + A++G + D Q + L DG ++ SP D +++F Y +Q + Sbjct: 182 DDETGVANVVVARTGKVLEDETGGQRLQLEDGVQYQGSPKRVDYQVVEFGGYQMQIKEQE 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 K + + L++ + + +EFH RL L + LI++ A Sbjct: 242 VGERRRKLSAMPIGELMDIDTPEAS----------AEFHWRLAIPLAIPLMTLIAVPMA- 290 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLL 352 + ++ K +F ++ + G F + P Y+ + ++ ++ LL Sbjct: 291 --RVNNRQGKFAKMFPAILLYLGYFGLMVAGRKSLEDGVIPQYLGMWWIHASALAIGILL 348 Query: 353 MIKKK 357 + K++ Sbjct: 349 LGKER 353 >gi|329850877|ref|ZP_08265722.1| hypothetical protein ABI_37960 [Asticcacaulis biprosthecum C19] gi|328841192|gb|EGF90763.1| hypothetical protein ABI_37960 [Asticcacaulis biprosthecum C19] Length = 385 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 59/353 (16%), Positives = 134/353 (37%), Gaps = 8/353 (2%) Query: 12 IGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAM 71 + + + IA + Q L + LV +S ++++ +P + ++ P + Sbjct: 1 MIVPVAGAVAALTAIALISQSLTQFELVVERGQSAWTFIRVTLLSMPLLSGLIFPIALFV 60 Query: 72 ETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQ 131 T LT + E +G S + P++ + + +F S ++P ++++ Sbjct: 61 GTLVALTRLQGEHEFTAAFASGMSLRQVSSPIIRIGVYFLLFSLASNLFLQPWSARSMRE 120 Query: 132 LSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-DSRDTQTHKIYYAQ 190 K + L + ++E F L I + + + N+ L+ I+I + + + Y A+ Sbjct: 121 ELFKVKNDLVSTLVKEGEFSTSPSGLTIYVQRIDQNSLLRQIYIRIPATEGGADRTYVAR 180 Query: 191 SGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSSTIVLKANDQNLS 248 G I +L + ++ + F ++ A+ ++ K +++ L Sbjct: 181 EGKITQVGTESLLILRNGSTQWVSGGELDHITFDETSIPISDYFASDDSLNFKESERYLH 240 Query: 249 FLLNPNPNNP----NYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKK 304 L PN P NY + + +E H RL L+ + F L++I+A R Sbjct: 241 ELFFPNLALPGDGGNYERKNVGKLMAEGHARLASPLYNLSFVLLAIMAVLGGGFSR-GGY 299 Query: 305 IHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I I+ ++ + + + YL + + ++ K+ Sbjct: 300 TQRIAIAAGVAVTARLLGVVMQTIGAEAAILNILQYLVPLIPIIMCVRLLNKR 352 >gi|121534980|ref|ZP_01666798.1| permease YjgP/YjgQ family protein [Thermosinus carboxydivorans Nor1] gi|121306393|gb|EAX47317.1| permease YjgP/YjgQ family protein [Thermosinus carboxydivorans Nor1] Length = 361 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 45/355 (12%), Positives = 111/355 (31%), Gaps = 4/355 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPT 59 M+ + YIL+ + F+ + + + ++ S+ + K+ Y +P Sbjct: 1 MRILDKYILKEMLGPFIFGIAAFSSVFIGTSTLFRLARYITEYGASVYSVTKLFIYSLPG 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ + P + + ++ ++E+ + + G S L PV A ++SI I Sbjct: 61 IIVLTFPMSMLLASLLAFGRLSASSEITAMKSGGLSFFRLAAPVFIAAFVVSIVAVILNE 120 Query: 120 IIEPKCRSTIKQ--LSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD 177 + P+ + + + + + + ++ + Sbjct: 121 AVVPRANNAYQNVLRYEIEKSRPKTQEHIVIKDVKDGEIERLTYARKFDEAANAMYAVTV 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + + D I+ G ++ +P + ++F + E + Sbjct: 181 QEFDKGRLVRVENAEKAIWDNGRWIMESGIIYDVAPEGQLQRTLRFDKQFMPVEKSPREI 240 Query: 238 -IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 K ++ L + TY E H+RL ++F LI + Sbjct: 241 AREQKKPEEMTIKELKQHIKVLQREYVKTSTYEVELHQRLAIPAASLVFALIGTPLGLQP 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + I + I + + F+ + + +F I FL Sbjct: 301 HRSSSSIGLGISIIIIFIYYTIMTVFTALGQGGAIPAVLAAWIPNIVFIIIGAFL 355 >gi|85859086|ref|YP_461288.1| permease [Syntrophus aciditrophicus SB] gi|85722177|gb|ABC77120.1| permease [Syntrophus aciditrophicus SB] Length = 394 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 59/365 (16%), Positives = 146/365 (40%), Gaps = 12/365 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+++ I + F + + F+ + +ILQ ++L+ + L+ + ++ +L+P+ Sbjct: 1 MKIINRYLVKEILQPFGIVLFVLTFVLLMGKILQLMDLMINKGVGLSHIARLILFLLPSF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + L ++ + EL ++ +G S L P+L +A++ + + Sbjct: 61 LVFTLPISLLVSVLIALGRLSSDNELTVLKASGISLYRLTPPILMIALVSFMLTAATTLF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 + P + K L ++E +F + + + K + ++G+ + D R Sbjct: 121 LVPYSNTATKALIFNVARNKASIGIKEKVFNADFNGVVLYAEKVPSDGRFMEGVLVSDQR 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAI----ILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 A+ + D +++ L DG + + K M FK+Y + + +S Sbjct: 181 TADEPGTIIAKKAFLVADPKSMTVTLRLEDGSTYFVAENMKIFRKMDFKTYDINLDLQSS 240 Query: 236 STIVLKAN-----DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 S+ K + L+ N + ++ E +++ + L ++F +++I Sbjct: 241 SSDAEKMRTKALKEMTPRELIQ-NLKSGRLDDKIYRKTAMELYEKFSIPLSCLVFSILAI 299 Query: 291 VAADKR-ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 K + + +++ + + + G ++ +P+ + LF I+ Sbjct: 300 PLGVKPHHRSVKSRGFTIGLMTVLLYYLLQLGCEGMVTVGRLSPFLGSWIPNILFTIAGT 359 Query: 350 FLLMI 354 L + Sbjct: 360 VLYFM 364 >gi|56698597|ref|YP_168974.1| hypothetical protein SPO3780 [Ruegeria pomeroyi DSS-3] gi|56680334|gb|AAV97000.1| membrane protein, putative [Ruegeria pomeroyi DSS-3] Length = 375 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 54/359 (15%), Positives = 123/359 (34%), Gaps = 5/359 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y LR + +V + W+ + + + + SS ++ + L+ + +PT+ Sbjct: 1 MSKFDGYFLRQLLVLCGFFAFVLVGVFWISKAVSLFDRLISSGQTAMVALEFTALTLPTL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P T V +NR +E+ ++ TG+S L +PV+ ++ + L Sbjct: 61 VRTVMPMAAFCATVYVTNRLNRESEMTVMLATGSSPFRLARPVILFGLVCAAMLATITLY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P ++ A+ +T L + F + + I K + + TL +++ D R Sbjct: 121 LRPAAMLRLEARQAEVAGDMTAQLLNDGQFMHPVKGVTVYIGKIDRDGTLNDVYLSDRRA 180 Query: 181 TQTHKIYYAQSGSIDLDRQAI--ILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST- 237 + Y + + + I ++ +G + + +S F+ ++ + Sbjct: 181 PERVVTYTSSKAFLARSGEQIALVMVEGTALQMETGRRTLSTTVFRDFSYDISALAKRDI 240 Query: 238 -IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 L E +RL+ V LI Sbjct: 241 ERRQDIRGMPTLALATAFDGEGLAETYSRGEISEELQERLSWIGVSVAVTLIGFSTLMLG 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 R + + + + S + +P + + ++ +L +K Sbjct: 301 TFSRFG-LWPQLIAAFAGLIALEGMRSTATAFVGSHPGLWWVQHAPALGGIALSILFLK 358 >gi|56479503|ref|YP_161092.1| hypothetical protein ebA7171 [Aromatoleum aromaticum EbN1] gi|56315546|emb|CAI10191.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1] Length = 359 Score = 130 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 44/360 (12%), Positives = 121/360 (33%), Gaps = 7/360 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y+ R I + M L + + + +++V L+ L LIP + Sbjct: 3 RVLTRYLAREIFGATAMVLLAFLGLFVFFDFINELDVVGKDGYELHHALIFVVMLIPGRV 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + T LT++ R++E+ ++ +G S +++ + + ++ + F+ + Sbjct: 63 YELLPVAVLIGTLYALTTLARHSEITVMRVSGMSTPAMLRALGGIGVIFVVLTFVIGEYV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P +Q A + + L L+ + + + + + Sbjct: 123 APPAEQAAQQWRLTATHSAVSNQLRSGLWVKDGLRVVNVRTVLPDRSMEKVRIYDFDAQH 182 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 I A +G D +Q +L R D+ + ++ S +++ Sbjct: 183 ALLSISEAATGRYDAAQQGWLLEGVRQTRFLGDHTDVVDLTELTWRSDLTPQVLSVLMVV 242 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 +++ L ++ + + Y K+L ++ +++ + R Sbjct: 243 PERMSVTTLF-AYISHLRENRQNADRYEIALWKKLVYPFAALVMMALALPFSFT--HDRM 299 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL----FCISSIFLLMIKKK 357 +F+ + + G N + + L ++ L+ ++++ Sbjct: 300 GGVSMKVFLGVMLGIGFHLLNGLFSSLGVINSWQPALAALTPSALFLAAAAGMLVWVERR 359 >gi|83952306|ref|ZP_00961038.1| Predicted permease [Roseovarius nubinhibens ISM] gi|83837312|gb|EAP76609.1| Predicted permease [Roseovarius nubinhibens ISM] Length = 372 Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats. Identities = 59/352 (16%), Positives = 125/352 (35%), Gaps = 5/352 (1%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 +L F L +V I W+ + ++ + + S +S + L+++ +P V+ +V P Sbjct: 1 MLSQFMVLFGFFALVLVSIFWINKAVRMFDRLISDGQSSFVFLELTALTLPGVIAVVLPI 60 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 V ++ +EL ++ TG S L +PVL ++++ + + +++ P Sbjct: 61 AGFAGAVYVTNRLSTESELTVMQATGYSPWRLARPVLIYGVIVAAMMSLLTHVLVPTSLH 120 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 ++ A+ +T L E F + I + P L+ +F+ D RD Q IY Sbjct: 121 RLETRKAEVSRNVTAKLLTEGEFLHPAGGVTFYIREITPEGELRDVFLSDRRDIQAPVIY 180 Query: 188 YAQSGSIDLDRQAI--ILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQ 245 ++ + + ++ +G + F ++ S ++ + + Sbjct: 181 TSKMAYLVQEGGGTKLVMVNGLAQTAQTKGNRLFTTFFTDFSYDISGLISDDVINLTHAR 240 Query: 246 --NLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 + L+ E H R Q L V+ LI R Sbjct: 241 YASTPALMTRAAEIAQISGVSEGVVTLELHNRFAQALMCVVAALIGFATLLLGTYSRFG- 299 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 I ++ + V + I P P+ Y + +L++ Sbjct: 300 VWRQILLAFLLLVAVKLVEGTLTSPILSAPELWPLAYAPPAMGFVLVVLLLY 351 >gi|313892370|ref|ZP_07825962.1| permease, YjgP/YjgQ family [Dialister microaerophilus UPII 345-E] gi|329121341|ref|ZP_08249967.1| YjgP/YjgQ family permease [Dialister micraerophilus DSM 19965] gi|313119229|gb|EFR42429.1| permease, YjgP/YjgQ family [Dialister microaerophilus UPII 345-E] gi|327469750|gb|EGF15216.1| YjgP/YjgQ family permease [Dialister micraerophilus DSM 19965] Length = 361 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 49/364 (13%), Positives = 117/364 (32%), Gaps = 14/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQ-ILQRINLVSSSTESLNILLKISGYLIPT 59 M+ + YIL+ FL I +L ++ S +KI IP Sbjct: 1 MRILDKYILKEFLGPFLFGVAAFTAIFLGSDTLLSIAGFITKYGASSLSAIKIFILAIPR 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ P + ++S++ +EL+++ N+G S + L P+ + ++SI Sbjct: 61 IIVYTFPMAVLLGALMCMSSLSGASELIVMRNSGQSFLRLAMPIFIFSAIISICAIAFNE 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEE---NLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + P + + + + + + L++ +K T + I Sbjct: 121 FVVPWTNREYQYILDVEIKKNLNPDIVDNIVMKDIQDGNLLHLIYAKKYNPETKELKDIT 180 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT--ESAN 234 + S G + +P + + F S + + Sbjct: 181 IQEFKDGKPVKIEMSPKAVWKEGVWDFKQGVAYDITPDGVE-HKLSFDSQAVPFIQKPDE 239 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + ++S L + + ++ E HKR + + ++F +I Sbjct: 240 IKNSNNNVGEMSISEL-KKTADLLKSANQDPTSFYMEIHKRFSLPIASLVFAIIGAPLGI 298 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--FCISSIFLL 352 + +QR F I +++ + + + P ++L I Sbjct: 299 R----KQRSSSSIGFGISVIVIFIYYAVMTFMEAMGEGHILPPFAAVWLPDILTFLIGCY 354 Query: 353 MIKK 356 ++++ Sbjct: 355 LVRR 358 >gi|239616611|ref|YP_002939933.1| permease YjgP/YjgQ family protein [Kosmotoga olearia TBF 19.5.1] gi|239505442|gb|ACR78929.1| permease YjgP/YjgQ family protein [Kosmotoga olearia TBF 19.5.1] Length = 1466 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 62/355 (17%), Positives = 128/355 (36%), Gaps = 3/355 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ YI + +F + + + + Q +L+ ++ L + Y +P Sbjct: 1 MRILIKYIFKQSMGAFFIGLGGFLIFVSLELLYQLSDLIVRYKVGIDKLFLLIYYNLPYF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + L+ M + EL+ + G + T++ P + A+LLS ++ + Sbjct: 61 IVLGIPVGVLLAIFWTLSRMQSDNELIALQTHGITLKTVVLPFVIFAVLLSGITYLFNDY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + A+ L+EN F Y+ I K +P ++ Sbjct: 121 IVPYANRKAYEAQARFIYRRPEVTLKENAFMEDGKGRYLYIKKIDPETGELKKILLYDLS 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS-TIV 239 ++ A+S + + I++DG V M F+S L S Sbjct: 181 GGKTRVTSAKSAT--KEGDKWIMHDGRVFELDSKGFLTFDMSFESLELDFGSDIQEYIRQ 238 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 K+ + S L + + + ++ + L P++ +I + + L Sbjct: 239 SKSPREMTSAELKKKIASFSRLGVRTSSLMVALQEKYSLSLAPLVIVMIGVPLSLIFNLR 298 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + + FI + I G S + + NP Y P + +F I+ I ++ Sbjct: 299 SKSWSVILTFILIVIYQGSGAWLSAMGKEDLLNPAYAPWIPNIIFAITGIITYLL 353 >gi|110596903|ref|ZP_01385193.1| permease YjgP/YjgQ [Chlorobium ferrooxidans DSM 13031] gi|110341590|gb|EAT60050.1| permease YjgP/YjgQ [Chlorobium ferrooxidans DSM 13031] Length = 359 Score = 129 bits (323), Expect = 7e-28, Method: Composition-based stats. Identities = 58/359 (16%), Positives = 127/359 (35%), Gaps = 6/359 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI R ++F+ + VF+ +I +++ ++ + S+ ++ IP+ Sbjct: 1 MKILDRYIFRQFAKAFIFTSTTFVFLFILITMVEHLDDMMGRNLSIFQIIGYYLLSIPST 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + + V ++ ++EL I + G S L+ P L A ++ ++ Sbjct: 61 VLVTAPVSSLLASILVAGRLSASSELSAIRSAGVSMRQLLYPFLAGASFIAAVNLVNSCW 120 Query: 121 IEPKCRS--TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 I P S + ++ + + S + +T + + I + Sbjct: 121 IAPAAFSGIARFEREHLSKEPGKLPENRNMHLIEQGNRIVSIGSMGSDESTGKAVSIEEF 180 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 A S S + +L + + + S+ S + K L + Sbjct: 181 SGAHLVSRIDAASMSYNPKSGEWMLENAAIRSFTGGSEQYSFIGRKPVKLSISPRSLLEF 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 L+ ++ N+S L+ +F+ +L+ +I LI + A Sbjct: 241 NLQPDEMNVSRHYRYLTEKRQAGISGLDRSAVKFYTKLSLPFASLIVMLIGVPL---SAK 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 ++ I I+L F +F G + P L +L I + + + K Sbjct: 298 KKRGGLASEITIALFFGF-LFIGLQKTVAIAGYQGAMNPALAAWLPNIIFLIVGYLIYK 355 >gi|145219259|ref|YP_001129968.1| permease YjgP/YjgQ family protein [Prosthecochloris vibrioformis DSM 265] gi|145205423|gb|ABP36466.1| permease YjgP/YjgQ family protein [Chlorobium phaeovibrioides DSM 265] Length = 360 Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 54/362 (14%), Positives = 118/362 (32%), Gaps = 7/362 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI + ++F+ + + V + +I +++ + ++ IP Sbjct: 1 MKILDRYIFQQFVKTFVFTTITFVSLFILINMVENLGDFMDRKLLFTDIVLYYLRAIPDT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + +P + + V + ++EL I + G S L+ P L I++S I+ Sbjct: 61 ILITSPVSSLLASILVAGRLAGSSELPAIRSAGVSMRQLLYPFLLGGIIISTLNIINSFW 120 Query: 121 IEPK---CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD 177 + P ++ + + + + I + Sbjct: 121 LAPIAAVHNHAFERDHLGKSRRNGAAEGSNLHIIEPGSRVVTIGRLNTSFTGAKEVSIEE 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 T A+S D + L + R +P ++ S L + + Sbjct: 181 FSGTGLRGRIDAESMRYDTGNKEWTLQNAAQRRFTPGGEEYQARPALSLPLSLTLKSLAE 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L+ ++ + LE + H ++ +I LI + A Sbjct: 241 LNLRPDEMQFIQHWQYLAEKKHAGFAGLERTMVKLHTKIAVPFASLIIILIGVPL---SA 297 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 ++ I ISL F +F G I N P+L +L + + + + Sbjct: 298 KKKRGGLATEIGISLFAGF-LFLGLQKTIATFGYNGVVNPMLAAWLPNLLFLAIGYGIYR 356 Query: 358 YT 359 Y+ Sbjct: 357 YS 358 >gi|253702060|ref|YP_003023249.1| permease YjgP/YjgQ family protein [Geobacter sp. M21] gi|251776910|gb|ACT19491.1| permease YjgP/YjgQ family protein [Geobacter sp. M21] Length = 391 Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 64/363 (17%), Positives = 131/363 (36%), Gaps = 16/363 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K+ YI + I FL+ + F+ + + L+ +V + + ++ YL+P Sbjct: 7 KTLYAYIFKEIPTPFLVGMVTFTFVLLMGRFLKLAEMVVEKGVPFSDVARMVAYLLPPFW 66 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + ++ ++E+ + + G S L+ P L A ++ Sbjct: 67 LFTIPMALLLAMLLAFGRLSGDSEITAMKSCGISLYGLLPPPLLFAACATLACLFVTVYA 126 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI-VDSRD 180 P S K+L + + ++E +F D+ + + G I D RD Sbjct: 127 VPWGNSGFKKLVVEIAQSSAGISIKEKIFNNAFPDMVVYTQSLDTKAQTMGGVIVHDERD 186 Query: 181 TQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESAN-S 235 +T +A +G++ D ++ L +G +HR +++F+ Y L+ A Sbjct: 187 PRTPTTIFASTGALVSDPKSNSMEFQLRNGSIHRAEEKGG-YRMVQFQEYNLRVSLAEGG 245 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + K ++ L LL+P E+H RL +F L++I Sbjct: 246 NKSPRKVSEMTLDELLHPPKGAQQKEILSRG---LEYHGRLALPFSCFVFTLLAIPLGI- 301 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF--LFCISSIFLLM 353 R+ K +S+ + + S + + P+L + + + Sbjct: 302 --QNRRSGKASGFSLSIGVILLYYVALSAF-KTLGERGMLPPLLAGWSPNLIFLMAGIYL 358 Query: 354 IKK 356 KK Sbjct: 359 FKK 361 >gi|119773933|ref|YP_926673.1| hypothetical protein Sama_0796 [Shewanella amazonensis SB2B] gi|119766433|gb|ABL99003.1| conserved hypothetical protein [Shewanella amazonensis SB2B] Length = 369 Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 60/365 (16%), Positives = 137/365 (37%), Gaps = 23/365 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + ++ + L ++ + ++ + S ++++ + G +P + Sbjct: 2 IVFRYLFKEVFKAQIAVLLVLLTVFISQHFVRVLADASDGEFPASLVVTLLGLNLPYLAV 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + M E+++ G S + + L LA+L +F + Sbjct: 62 LVLPLSLFLGILMAHGRMYAENEMVVFHGVGVSEWYVTRVTLLLAVLNMLFTGYLSLFVT 121 Query: 123 PKCRSTIKQLSAKAQLAL-TFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD---- 177 P Q+ KAQ + ++ D + + K +N L+ +F+ Sbjct: 122 PWAEERQNQVLEKAQSEAGLAALVQGRFQTSPDGRAVLFVEKIGKDNELEKVFVAQLPDP 181 Query: 178 SRDTQTHKIYYAQSGSIDLD---RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + + A G + D Q + LNDG ++ SP S D +++F Y +Q + Sbjct: 182 DDEHGQINLVSAAGGKVVEDASGAQQLKLNDGVRYQGSPKSLDYQVLEFGGYGMQIKEQE 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 K + L+ LL+ + +E H R+ L + LI++ A Sbjct: 242 VDERRRKMSALPLNQLLD----------QNTPEAVAELHWRIAIPLAIPLMTLIAVPMA- 290 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ--NPYYIPILYLFLFCISSIFLL 352 + ++ K + ++ + G F +E P ++ + ++ L + +L Sbjct: 291 --RVNVRQGKFAKMLPAILLYLGYFGLMVAGRKALEDEVVPAFMGMWWIHLSALVMGIML 348 Query: 353 MIKKK 357 + K++ Sbjct: 349 LGKER 353 >gi|21674368|ref|NP_662433.1| hypothetical protein CT1549 [Chlorobium tepidum TLS] gi|21647546|gb|AAM72775.1| membrane protein, putative [Chlorobium tepidum TLS] Length = 384 Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 52/357 (14%), Positives = 116/357 (32%), Gaps = 6/357 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI R FL + + +I +++ ++ S +L +P Sbjct: 28 TIIDRYIARQFLTIFLFALASFAALFILINLVENLDRFLDRHISFGRILIYYLSGLPDTF 87 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + +P + + V ++ +EL + + G S L+KP L + + ++ I+ I Sbjct: 88 LLTSPLSVLLASLFVTGKLSMQSELPALKSAGMSLSRLMKPFLLVTMAIAALNTINSCFI 147 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P K + + E ++ + + + + + Sbjct: 148 APAMYDWSKGFEKRYLKKQQDNGEEPLHIRESNNRILTVAKIGPDKKSATTVSLETFNGS 207 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDI-SIMKFKSYTLQTESANSSTIVL 240 Q A S I + I + + S ++ + + + L I Sbjct: 208 QIVSRIDADSLRIITRHKYWIFYNTKQRTFSKGAETLVTRAGADTLKLSLAPNTFKMIDT 267 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 ++ N+ ++ LE + H +L L +I LI + + + Sbjct: 268 DPDEMNIVQHIDFIWQKARSGLPGLERATVKLHTKLALPLASMIIVLIGVPL---SSKKK 324 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF-CISSIFLLMIKK 356 + I ISL I ++ G I + + P+L +L + I + + Sbjct: 325 RSGLAVEISISLLIG-LLYLGMLKTIGSLGYDGLLNPVLAAWLPDILFIIAGTFLYR 380 >gi|222054621|ref|YP_002536983.1| permease YjgP/YjgQ family protein [Geobacter sp. FRC-32] gi|221563910|gb|ACM19882.1| permease YjgP/YjgQ family protein [Geobacter sp. FRC-32] Length = 389 Score = 128 bits (322), Expect = 9e-28, Method: Composition-based stats. Identities = 69/356 (19%), Positives = 136/356 (38%), Gaps = 6/356 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI + I F + F+ + ++L+ ++V + L +L++ YL+P+ L Sbjct: 3 STLYRYIFKEIPPPFFLGVATFTFVLLMGRLLRLTDMVVTKGVPLGDVLRMILYLLPSFL 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P F + ++ ++E++ + +G S L+ PV LA++ + Sbjct: 63 LVTIPMAFLLAILLAFGRLSGDSEIIAMKASGISLYGLLPPVFSLAVITYLAGAFITIYA 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSRD 180 PK S K L ++E +F + I Y+ + GI I D RD Sbjct: 123 VPKGNSAFKDLLVTVVENRVSLGVKEKVFNGDFPGIVIYCDGYDERTQVMSGIIIQDERD 182 Query: 181 TQTHKIYYAQSGSIDLDRQAI----ILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 A G+I+ D + L G +HR + + +++F Y L + +S Sbjct: 183 PLEPSTIMAGHGTINADHASRSVRLHLASGSIHR-TAGREGYRLVQFSDYDLHINLSQAS 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + L N N+ ++ + R E+H+R + +IF L+ + + Sbjct: 242 QAVKRDERDMSLAELRTNWNSNHFDNKGRLEMRLEYHRRFSLPFACLIFTLVGMPLGIQN 301 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 + L + + + + K NP+ + LF I+L Sbjct: 302 QRSGKAAGFAISIFLLLLYYIILSACKTLGEKELLNPFLAAWVPNMLFVAFGIYLF 357 >gi|157960739|ref|YP_001500773.1| permease YjgP/YjgQ family protein [Shewanella pealeana ATCC 700345] gi|157845739|gb|ABV86238.1| permease YjgP/YjgQ family protein [Shewanella pealeana ATCC 700345] Length = 371 Score = 128 bits (322), Expect = 9e-28, Method: Composition-based stats. Identities = 58/365 (15%), Positives = 133/365 (36%), Gaps = 23/365 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R + ++ + L ++ I ++ + S ++++ + G +P + Sbjct: 2 IVFRYLIREVFKAQIAVLLVLLAIFISQHFVRVLADASDGDFPASLVMTLLGLNMPFLTV 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + M E++I G S + + L LA++ +F + Sbjct: 62 LVLPLSLFLGILLAHGRMYAENEMVIFHGVGISEWYITRITLLLAVINMVFTAFLSIYVA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-----D 177 P Q+ AQ + L + F + + + + V Sbjct: 122 PWAEERQNQVLEHAQSEAGLAALTQGRFQTSPNGRAVLFVERIGRDNQLDKVFVAQLPDP 181 Query: 178 SRDTQTHKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 +T + A++G + D Q + L DG ++ +P D +++F Y +Q + Sbjct: 182 DDETGVANVVVARTGKVVEDEIGGQRLQLEDGVQYQGNPKRVDYQVVEFGGYQMQIKEQA 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 K + + L++ + +EFH RL L + LI++ A Sbjct: 242 VDERRRKLSAMPIGQLMDID----------SPEATAEFHWRLAIPLAIPLMTLIAVPMA- 290 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLL 352 + ++ K +F ++ + G F + P Y+ + ++ ++ LL Sbjct: 291 --RVNNRQGKFAKMFPAILLYLGYFGLMVAGRKSLEDGVIPQYLGMWWIHASALAIGILL 348 Query: 353 MIKKK 357 + K++ Sbjct: 349 LGKER 353 >gi|77165378|ref|YP_343903.1| permease YjgP/YjgQ [Nitrosococcus oceani ATCC 19707] gi|254434004|ref|ZP_05047512.1| putative permease, YjgP/YjgQ family [Nitrosococcus oceani AFC27] gi|76883692|gb|ABA58373.1| permease YjgP/YjgQ [Nitrosococcus oceani ATCC 19707] gi|207090337|gb|EDZ67608.1| putative permease, YjgP/YjgQ family [Nitrosococcus oceani AFC27] Length = 354 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 41/355 (11%), Positives = 105/355 (29%), Gaps = 3/355 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI + + L+ ++ + +Q + + V + L+ + Y IP Sbjct: 1 MKILDRYIAKAVISYTLLVLFILIALYTFLQFVTELEDVGEGDYGVMGALRYTTYSIPQH 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + + L + +EL+ + G S + L ++ I + + Sbjct: 61 IYDLLPVAALLGSVLGLGYLAGQSELVAMRAAGFSVGRITLSALATGMIFVIVTVLMGEV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + +L + A+ + + R ++ Sbjct: 121 VAPPAQQAANKLRSLAKTGHLSEDGGQGFWSRNGNNFNHVGRVLPNGQYEYIEIFEFDDQ 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + A D L D S + + +++ Sbjct: 181 RRLRIVTQAARAIYHKDG--WHLYDVTQRLISTKGITTRRLDEALWESGLNPEMLDVVMV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + L + E YR F ++ +I ++I Sbjct: 239 DPQQLSAWGLYR-YIGYLQKSKQAAEQYRQAFWSKIVAPFSTLIMMFLAIPFIFGPLRSV 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + + I F +F + + P ++ + L C++ +++ + Sbjct: 298 SVGQRILVGALVGIGFFLFNRLFNQLGLVFDLPPWLGAAFPSLLCLALGVVMLRR 352 >gi|290968957|ref|ZP_06560492.1| YjgP/YjgQ family [Megasphaera genomosp. type_1 str. 28L] gi|290780913|gb|EFD93506.1| YjgP/YjgQ family [Megasphaera genomosp. type_1 str. 28L] Length = 362 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 49/365 (13%), Positives = 115/365 (31%), Gaps = 14/365 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQIL-QRINLVSSSTESLNILLKISGYLIPT 59 M+ + YIL+ FL + L + ++++ S K+ +P+ Sbjct: 1 MRILDKYILKEFIGPFLFGVCAFTAVFVGTGTLYRIASMINEYGASAAAAAKVLVLALPS 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ + P + ++ +E++++ G + L PVL A +S+ Sbjct: 61 IVVLTFPMSVLLGALMAFGRLSAASEIIVMRAGGQHFVRLAMPVLVAAFFISLGTTAFNE 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIK---ISKYNPNNTLQGIFIV 176 + P+ + ++ + +E++ + I ++ + I Sbjct: 121 FVVPRANNAYNRIINEEIRHHALPVSQEHVIIKNVHGQNIYGLLYARQYDGTEKEFRDIT 180 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT--ESAN 234 Q + ++ + + I++ G ++ S M F++ L Sbjct: 181 VQEFEQDRLVRVEKADRAKWNGKKWIVHQGSIYDVSSNDNTSRTMTFENQELPFMQRPEK 240 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 K + + L + + E + R L ++ LI Sbjct: 241 VQEAQKKPEELTIREL-RQQIRVLTAHGVDVNKLKVEMYNRFALPLASLVCALIGAPLGL 299 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL---FCISSIFL 351 ++ IS+ F +++ + + P FL C S Sbjct: 300 ---QKQRGSSSIGFGISVVTIF-IYYSIMTLADALGNGGTIAPAAAAFLPDIICGSVGIF 355 Query: 352 LMIKK 356 LMI+K Sbjct: 356 LMIRK 360 >gi|119511693|ref|ZP_01630798.1| hypothetical protein N9414_06074 [Nodularia spumigena CCY9414] gi|119463678|gb|EAW44610.1| hypothetical protein N9414_06074 [Nodularia spumigena CCY9414] Length = 371 Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 49/356 (13%), Positives = 127/356 (35%), Gaps = 20/356 (5%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQIL-QRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y + + FL + I + + + + S ++I +++ P + Sbjct: 1 MDRYFTKELVAPFLFGVGAFSSLGVTIDAVFELVRKIVESGLPISIAIQVFLLKFPNFIV 60 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + T + ++ +EL+ + G S ++ + L+++++ FI I Sbjct: 61 LAFPMSTLLATLMTYSRLSGESELIAMRGCGVSVYRMVLTAVMLSLVVTGITFIFNEQIA 120 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI------------KISKYNPNNTL 170 P KA + ++ + N+F+ D+ + + Sbjct: 121 PAANYQATVTLEKALKSDRPTFQQSNIFYPEYRDVEQPDGSRNRILARLFYADQFDGKQM 180 Query: 171 QGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT 230 +G+ I+D ++I ++S + +G V+ +P S +I++F+ LQ Sbjct: 181 KGLTIIDRTTEGLNQIVVSESAQWNASDNVWDFYNGTVYLVAPDSSYRNILRFEHQQLQL 240 Query: 231 ESANSS--TIVLKANDQNLSF-LLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGL 287 + + + N+ L + + + ++ + V+FGL Sbjct: 241 PRTPLNLVERRRDSGEMNIRESLEQLEIQRIGGDRKEIRKLQVRIQQKFSLPFVCVVFGL 300 Query: 288 ISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 + + ++ + +S+ + F + F +I + Q P + +L Sbjct: 301 VGSA---MGSRPQRSGRGTSFGVSVIVIFTYYLIF-FISGAMGQAGVLSPFMGAWL 352 >gi|239993538|ref|ZP_04714062.1| permease YjgP/YjgQ [Alteromonas macleodii ATCC 27126] Length = 366 Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 51/364 (14%), Positives = 124/364 (34%), Gaps = 22/364 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+L+ +S L ++ I ++ ++ + S ++L G P + Sbjct: 2 LIFRYLLKETLKSQLAIFFILMAIFVTLRFVRVLGDASDGDIPAGLVLGFLGLYAPILSS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + + ++E+ ++ G S + + +LFL++L+ I Sbjct: 62 LVLPISAYLGIMLAHGRLYVDSEMTVMRACGISEWYVTRVMLFLSVLIMIVTGAITLYFA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD----LYIKISKYNPNNTLQGIFIVDS 178 P QL KA+ S L F + ++ + + + Sbjct: 122 PLAAENEYQLREKARNEAGISALMPGRFQQTGNEKAVIFVHDVDNNDKLQRVFLSQNQTD 181 Query: 179 RDTQTHKIYYAQSGSIDLDRQAI---ILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 ++ YAQ+G + + +L +G + K ++F Y +Q + Sbjct: 182 DSEGDVRVVYAQTGEVANNPDGTRNLVLKEGVQYEGKQSEKAFRKVEFDEYQIQIADKPA 241 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 K + + L + R+E R+ L LI++ Sbjct: 242 DETRRKVSVLPTNELWEDDSIEA----------RAELQWRIAIPLSIPFLVLIAVPL--- 288 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLM 353 A+ ++ + +F ++ + G F + + P + + ++ + +L+ Sbjct: 289 SAVDPRQGRFGKMFPAILLYLGYFLLLLASRRVLEDGKMPPQLGLWWVHTIMLIIGVMLI 348 Query: 354 IKKK 357 ++ + Sbjct: 349 VRDR 352 >gi|157374154|ref|YP_001472754.1| permease YjgP/YjgQ family protein [Shewanella sediminis HAW-EB3] gi|157316528|gb|ABV35626.1| permease YjgP/YjgQ family protein [Shewanella sediminis HAW-EB3] Length = 370 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 57/365 (15%), Positives = 133/365 (36%), Gaps = 23/365 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R + ++ + ++ I ++ + S ++++ + G +P + Sbjct: 2 IVFRYLIREVFKAQIAVLFVLLAIFISQHFVRVLANASDGEFPASLVMTLLGLNLPYLAV 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + M +E++++ G S + + L LA++ +F + Sbjct: 62 LVLPLSLFLGILLAHGRMYAESEMVVLHGVGVSEWYITRVTLLLAVINMLFTGYLSVFVT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI-----VD 177 P Q+ AQ + + + F + + + + Sbjct: 122 PWAEEKQNQVLESAQSEAGLAAITQGRFQTSPNGRAVLFVERIDRDNQLDKVFVAQLPDP 181 Query: 178 SRDTQTHKIYYAQSGSIDLD---RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 ++ I A+ GS+ D Q + LNDG ++ +P D +++F Y +Q + Sbjct: 182 EDESGQSNIVMAKGGSVVEDGSGGQRLQLNDGVQYQGTPKKVDFQVVEFGGYQMQIKEQE 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 K + + L+ + +EFH RL L + LI++ A Sbjct: 242 VDERRRKLSALPIKDLMALD----------GPEATAEFHWRLAIPLAIPLMTLIAVPMA- 290 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN--PYYIPILYLFLFCISSIFLL 352 + ++ K +F ++ + G F +E P Y+ + ++ + LL Sbjct: 291 --RVNVRQGKFAKMFPAILLYLGYFGLMIAGRKALEDGVVPAYLGMWWIHASALFLGILL 348 Query: 353 MIKKK 357 + K++ Sbjct: 349 LGKER 353 >gi|306842048|ref|ZP_07474721.1| permease YjgP/YjgQ family protein [Brucella sp. BO2] gi|306287889|gb|EFM59309.1| permease YjgP/YjgQ family protein [Brucella sp. BO2] Length = 371 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 102/332 (30%), Positives = 191/332 (57%), Gaps = 8/332 (2%) Query: 32 ILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDN 91 +LQRIN +++S ++ +++ S LIP+ +P+V PF + T L++MN+++EL++I+ Sbjct: 1 MLQRINFLTTSGQTFQTIVQFSSLLIPSAIPLVMPFALIIAITQTLSTMNQDSELVVINA 60 Query: 92 TGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFF 151 +G R +++P+L LA +S+ F+ N +EP R ++ + A A L ++E F Sbjct: 61 SGAPRSAVMRPILILAATVSVTSFLIANYVEPYARINMRAMIANASADLMHVIIQEGTFR 120 Query: 152 RLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSI--DLDRQAIILNDGEVH 209 +L D+LYI++++ + ++ G+FI DSRD IYYA G+I +++ +GEV Sbjct: 121 KLADNLYIQVAERRADGSIGGLFIADSRDPTLDLIYYAADGAIASTPSGDMLLMENGEVQ 180 Query: 210 RKSPISKDISIMKFKSYTLQTESANS--STIVLKANDQNLSFLLNPNPNNPNYRPELLET 267 R++ +SI+KF SY S V+ A D+ L++LLNP+PN+P + L Sbjct: 181 RRNVSDGTVSIIKFDSYAFDLNQFASAGDDFVIFAKDRPLTYLLNPDPNDPMLQTRPLT- 239 Query: 268 YRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH 327 YR+E H+R TQW++P+IF +I++ A + ++ F ++S + V+W + Sbjct: 240 YRAELHRRFTQWIYPLIFAMIALAIAGDSR-SHREARVSASFSAISTALLVYWAGYFASD 298 Query: 328 KIEQNPYYIPILYLFLFCISSI--FLLMIKKK 357 + +++ YI ++YL + + F+L+ ++ Sbjct: 299 RADKDSSYILVMYLVPLVVFLVTGFILLTGRR 330 >gi|254424599|ref|ZP_05038317.1| putative permease, YjgP/YjgQ family [Synechococcus sp. PCC 7335] gi|196192088|gb|EDX87052.1| putative permease, YjgP/YjgQ family [Synechococcus sp. PCC 7335] Length = 397 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 60/363 (16%), Positives = 122/363 (33%), Gaps = 21/363 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQ-ILQRINLVSSSTESLNILLKISGYLIPTV 60 + YI + + FL IA I + + I V+ + S + +I +PT Sbjct: 24 TIMDRYIAKELTLPFLFGVGAFSSIAVSIGALFELIRKVADAGLSATLAFEIFLLSLPTF 83 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + T + + ++EL+ + G S ++ P + L++L++ F I Sbjct: 84 TVLAFPMSTLLATMMTYSRFSSDSELIAMRGCGVSINRIVAPAVILSLLVTGLSFSVNEI 143 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLD-------------DDLYIKISKYNPN 167 I P L A+A + E N+ F+ Sbjct: 144 IAPASTERAALLLARALDDEKPPFREGNIVFQQQEPAADGSGDELVRFFYARNFDGTTMR 203 Query: 168 NTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 + F + + +I A + + D R +G ++ SP I++F Sbjct: 204 DITVVDFSQEDSEDGLKQIVSADAATWDFTRNLWEFTNGTIYAVSPTGSFRQIIRFDKQD 263 Query: 228 LQT--ESANSSTIVLKANDQNLSFLLNP-NPNNPNYRPELLETYRSEFHKRLTQWLFPVI 284 LQ + + K + N++ + + ++ V+ Sbjct: 264 LQLPRTPLDLANRTKKQEEMNIAETKEYLTILQQTGDEKAVRKLAVAIQRKYAIPFACVV 323 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 FGL+ + + K IS+ I FG ++ S+I + ++ P L ++ Sbjct: 324 FGLVGAAVGVRPQ---RTGKATSFGISVVIIFG-YYLLSFITSAMGESGVITPFLAGWVP 379 Query: 345 CIS 347 Sbjct: 380 LFI 382 >gi|119899192|ref|YP_934405.1| integral membrane protein [Azoarcus sp. BH72] gi|119671605|emb|CAL95518.1| probable integral membrane protein [Azoarcus sp. BH72] Length = 358 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 38/360 (10%), Positives = 119/360 (33%), Gaps = 8/360 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K Y+ + I + + + + + ++ V L + ++P + Sbjct: 3 KILSRYLAKEIFGATATVLVAFLGLFAFFDFINELDSVGKDGYQLYQAVIYVAMIVPGRV 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + + LT++ R++E+ ++ +G S +++ + + + + F+ I Sbjct: 63 YELLPIAVLIGSLYALTTLARHSEITVMRASGLSTWRMLRILGLIGSVFVVLTFVFGEYI 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P S +Q A + L L+ + + + P+ +++ + I + Sbjct: 123 APPAESAAQQWRLVATNSAVSQQLRSGLWVKDGAQVIN-VRTLRPDRSMEHVRIYAFNEH 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + + + LN + R + + + + S +++ Sbjct: 182 YGLESISEAATGVYDGEGQWRLNGIQRTRFTDERTVLEHEDSIIWRSELTPEVLSVLMVV 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 +++ L + + + Y K+L ++ +++ A R Sbjct: 242 PERMSVANL-WAYVRHLRENRQNADRYEIALWKKLVYPFAVLVMLALALPFAFT--HDRM 298 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL----FCISSIFLLMIKKK 357 +F+ + + G + N + + L +++ L ++++ Sbjct: 299 GGVSVKVFLGVMLGIGFHLLNGLASNLGVINAWPPVLAALTPSLVFLATAAVMLYSVERR 358 >gi|258591111|emb|CBE67406.1| putative Permease YjgP/YjgQ family protein [NC10 bacterium 'Dutch sediment'] Length = 426 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 48/363 (13%), Positives = 124/363 (34%), Gaps = 13/363 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + ++LR + SF + F+ + Q+++ ++L+ + + ++L++ Y++P Sbjct: 32 LIDRHLLREMAASFALGLGTFTFVLLMDQMMRLMDLIINKGAPVGVVLRLISYILPFSFT 91 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + ++ E +++ +G S L+ P + ++ + +++ Sbjct: 92 VTIPMSVLLAVLATYGRVSSEGEAIVLKTSGLSLYRLMAPGVLFGVVATFATLWISTLVQ 151 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS--KYNPNNTLQGIFIVDSRD 180 P K L+ + + LE +F L I + + + I Sbjct: 152 PSSTKAFKTLTHQLYHTHVLTALENGIFNTEYPGLAIYVDRSEKTDGTLHGILVIDQRNQ 211 Query: 181 TQTHKIYYAQSGSIDLDRQAI-----ILNDGEVHRKSPIS-KDISIMKFKSYTLQT---- 230 I + ++ D + L+ G + S + F++Y LQ Sbjct: 212 ADQRLIIAQEGKLLNKDDETEAPIGLQLSRGTLQISSRDHPDRYRNLDFETYDLQILTGG 271 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 A + V ++ + N+ L N + E HK+ + + +I +I Sbjct: 272 TVAETVARVRQSKEMNIGEL-RTEIARLNKDGGKAWPLQVELHKKFSLPIACLILSMIGA 330 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 A + + + + + + + +P + +I Sbjct: 331 PLAMRIKKAGRGVSLALSVAFAVFYYILLATGESLGSRGRIDPALGVWFPNLTLGMIAIG 390 Query: 351 LLM 353 L++ Sbjct: 391 LVL 393 >gi|284049007|ref|YP_003399346.1| permease YjgP/YjgQ family protein [Acidaminococcus fermentans DSM 20731] gi|283953228|gb|ADB48031.1| permease YjgP/YjgQ family protein [Acidaminococcus fermentans DSM 20731] Length = 363 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 53/364 (14%), Positives = 119/364 (32%), Gaps = 11/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPT 59 M + YIL+ + + FL I + + ++ S + L+++ L+P Sbjct: 1 MSILDKYILKQMMQPFLFGVAAFSTIFVASSFLFRVTQYITQYGASYSSLIRLFLCLMPE 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 V+ P + + ++ N+E+ + + G S + P+L ++S+F + Sbjct: 61 VINYTFPMSMLLAALLTMGQLSSNSEITAMRSGGLSFRRIAAPILAAGFVVSLFSVVWAE 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRL---DDDLYIKISKYNPNNTLQGIFIV 176 + P +S +++ T + ++ + + + ++ I Sbjct: 121 KVVPPAKSEYERIIKVEIKRDTKPRTQNHVLIKQVSKGQLVRLTYARTFDEKQGMMKDIT 180 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE-SANS 235 ++ + I+ G + + M F L + + Sbjct: 181 IEDWDNGKVARIQRTPQAKWTQGTWIMEGGTITDLTGKDGVARTMTFDKQVLPISETPKA 240 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 T+ K DQ L + + Y E ++R T L F LI + Sbjct: 241 ITLDQKDPDQMTIGELKMYIDILKRQYMPTSKYEMEIYRRFTVPLASFFFALIGVPLGV- 299 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL--FLFCISSIFLLM 353 ++ + S+ I F + +++ + Q P+L + M Sbjct: 300 --QSQRTGASMGLGFSVVIIFIYYSIMTFMTG-LGQGGVIPPLLAAATPNLLCGAFGCWM 356 Query: 354 IKKK 357 I KK Sbjct: 357 IYKK 360 >gi|255658902|ref|ZP_05404311.1| permease, YjgP/YjgQ family [Mitsuokella multacida DSM 20544] gi|260848851|gb|EEX68858.1| permease, YjgP/YjgQ family [Mitsuokella multacida DSM 20544] Length = 364 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 41/366 (11%), Positives = 129/366 (35%), Gaps = 12/366 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + YI R + ++F+ + + + ++ SL+ ++K+ + +P+V Sbjct: 4 RILDKYIFREVFKAFIFGICAFSAVFIGSGTLFKIAKYITDYGASLSAVIKVFVFGLPSV 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + T ++ ++E+ + + G + P + + L+SI Sbjct: 64 IMWTFPMSMLLATLLTFGRLSSSSEITAMKSCGIGFYRIAAPAVIMGFLVSIGAIAFNEY 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD----DLYIKISKYNPNNTLQGIFIV 176 + P + + + +E++ + + +Y+ + + Sbjct: 124 VVPWANTAYRNVVYYEIQGNNGMKSQEHIILKDIQDGKIQRLVYARRYDGDTQTLQGVTM 183 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE-SANS 235 + + + + I+++G ++ S + S+ +F + L + + Sbjct: 184 QDFNQDGKVSHVENAEYAEYSMDKWIMHNGMLYDISEGQSEHSM-RFDTQVLPIKANPKQ 242 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 K ++ L N + +E ++R+T + +IF LI + + Sbjct: 243 IVREQKDPEELTMKELRAQINIMKTQYVDTNKLEAELYQRITVPMASLIFALIGVPLGLQ 302 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF-CISSIFLLMI 354 F I ++ + + + ++ PI+ +++ + I ++ Sbjct: 303 PTRNSSSAG----FAMSVIIIFFYYALMTMGNALARSGAVAPIIAVWIPNIVGLIAGFIL 358 Query: 355 KKKYTK 360 ++ ++ Sbjct: 359 IRRASR 364 >gi|310778171|ref|YP_003966504.1| permease YjgP/YjgQ family protein [Ilyobacter polytropus DSM 2926] gi|309747494|gb|ADO82156.1| permease YjgP/YjgQ family protein [Ilyobacter polytropus DSM 2926] Length = 357 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 62/357 (17%), Positives = 140/357 (39%), Gaps = 2/357 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YIL+ + + FI + ++Q + + SL +++I + +P + Sbjct: 1 MKIIHRYILKEMRMPIIFGISLFTFIFLIDIMVQMMENIIVKGVSLLDVVRILSFYLPPI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P F + + + +E +++ G S ++IKP LA+ ++ F+F + Sbjct: 61 LSQTIPMGFFLGVMITYSKLTSTSESTAMNSMGMSLNSIIKPTFMLALGITAFVFFLQES 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P ++QL+ K L+EN++ DD I I K + + + I I Sbjct: 121 IIPNSFVKLQQLTLKIAYEKPAFQLKENMYIDEVDDYSIYIDKVGGDGSAENILIFKKEK 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + ++ D A+IL D E + +P + +F + S + + Sbjct: 181 DNSFPTVLTAKKAMWKD-AAMILEDAEFYNLNPDGSEKLRGEFSRQKIPINSF-FENVKM 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K ++ + + + E Y E +K+L L ++ G++ ++ + Sbjct: 239 KVSEIETMSVRQLLKESKDKDDEEKLPYIVEMNKKLAIPLSAIMLGILGVLFSVGHHRSG 298 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + + + ++ + +P+ F+ +I++ ++KK+ Sbjct: 299 KGVSYGISLGVIFLYIASLNVGVVMANRGKISPFIGIWTPNFVLLGLTIYMYLLKKR 355 >gi|255264665|ref|ZP_05344007.1| permease YjgP/YjgQ family protein [Thalassiobium sp. R2A62] gi|255107000|gb|EET49674.1| permease YjgP/YjgQ family protein [Thalassiobium sp. R2A62] Length = 380 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 61/357 (17%), Positives = 134/357 (37%), Gaps = 5/357 (1%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y+L + F L ++ + WV + + + + + +S + L+ + +P V+ Sbjct: 9 RLDRYMLSQLMMLFGFFSLVLIMVYWVNRAVILFDQLIADGQSAGVFLEFTALSLPNVIR 68 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + V ++ ++EL ++ TG S + L +PV+ +L++ + + +++ Sbjct: 69 LVLPLSAFAASVYVTNRLSTDSELTVMQATGHSAVRLARPVIVFGLLVTALMMVLTHVLV 128 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P S + A+ +T L E F + + + + + L IF+ D+R+ + Sbjct: 129 PTSLSRLNDREAEIAENVTARLLTEGTFLNPASGITFYVREISASGELLDIFLTDTRNPK 188 Query: 183 THKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 Y A+ + D +++ +G + ++ ++ F T S Sbjct: 189 RQITYTAEQSFLVRSDDGPQLVMINGLTQTLTLETQRLTTTTFADSTFDIGGLIDSGSRG 248 Query: 241 K--ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + + LL P + T E H R Q L V+ L+ Sbjct: 249 RVNIREVATMDLLYPTQEIRDLTRRDDATLIHEGHGRFLQALLAVVAALVGFSTLLIGGF 308 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 R I I++ + + S + I + PI+Y + I + Sbjct: 309 SRFG-ISKQIVIAIFLLIAIKTVESVAVGAIRGQAHLWPIIYTPIAVGLVISAAQLY 364 >gi|302342717|ref|YP_003807246.1| permease YjgP/YjgQ family protein [Desulfarculus baarsii DSM 2075] gi|301639330|gb|ADK84652.1| permease YjgP/YjgQ family protein [Desulfarculus baarsii DSM 2075] Length = 359 Score = 127 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 46/362 (12%), Positives = 124/362 (34%), Gaps = 8/362 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ LY+ + F + V + + +++++ + + +L +P + Sbjct: 1 MRILGLYVAGEFLKVFGFLLVAFVSLFTLFDFIEKVDNFHEALVPASTMLMYFLLQVPEI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +++P + T L M++ E + I ++G S + P++ LA+ +++ + + Sbjct: 61 ISLLSPLAVLLGTIIALGLMSKRGETIAIKSSGVSVMRFTLPIVLLALTITLSTALINEM 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P ++ + S F+ + I ++P + + D Sbjct: 121 ALPGTKARTNHIWNVMVEKRPSSAYSHEKFWFKGNGSIYHIGLFDPLGQVLSNVVYYRFD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS-TIV 239 + + + G ++ P S + F + + Sbjct: 181 DHFNLAERIDARRATYIGGKWLFFLGLHQQRLPQGG-YSAVVFDELEKNLPERPEDFSRL 239 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 K +++ L+ + + Y+ + H +++ VI LI I A Sbjct: 240 SKPSEEMGLAELSDHVGKVDAEGYDTRRYQVDMHCKISYPFICVIMALIGIPLALF--RE 297 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL----FCISSIFLLMIK 355 R R I + + ++ + F Y P++ +L F ++ + ++ Sbjct: 298 RGRALAPGIVVGMLVALVYWISFGYARSIFGYGGVLPPMMAAWLPNAMFALAGVGMITSV 357 Query: 356 KK 357 ++ Sbjct: 358 RQ 359 >gi|158521443|ref|YP_001529313.1| permease YjgP/YjgQ family protein [Desulfococcus oleovorans Hxd3] gi|158510269|gb|ABW67236.1| permease YjgP/YjgQ family protein [Desulfococcus oleovorans Hxd3] Length = 359 Score = 127 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 52/363 (14%), Positives = 122/363 (33%), Gaps = 10/363 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+ I ++ + ++ I + ++I+ + L+ + + IP + Sbjct: 1 MTILSRYIIAEILKALAVVMAVVIVIYVAVDFFEKIDDFLGAGVPLSRMAVFFLFKIPLI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + V MNR E+ + ++G +L KP + + + L I I Sbjct: 61 VVQTAPVGVLIASLVVFGLMNRRNEVTALKSSGIGPASLFKPAAVVGVGCCVLLLIVSEI 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ S + + T S ++N + DD + I Y P ++ D Sbjct: 121 VVPRTISRANYIWLQQVRQKTSSVDQKNNIWLKDDRTIVHIRHYQPREKKAFDVVLHDLD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD--ISIMKFKSYTLQTESANSSTI 238 + D L + + + + L + Sbjct: 181 EGFRVTRRIDAARGLYDGGQWTLRNVLDQQFDVAGNVQLVEFRERLKIELDLLPEDLDRA 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 A++ LL+ + + ++R + H +L+ ++ GLI Sbjct: 241 AESADEMGFVQLLDR-IRQVERQGYSVVSHRVDLHAKLSFPFVCLLMGLIGAALGIMGRT 299 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF----LFCISSIFLLMI 354 + + SF V+W F + P++ + +F ++ ++++ Sbjct: 300 --RGGITANAAYGVGASF-VYWIFHSFCISLGYGGMLPPLIAAWSANLVFGGATAAVILV 356 Query: 355 KKK 357 ++ Sbjct: 357 ARR 359 >gi|298529508|ref|ZP_07016911.1| permease YjgP/YjgQ family protein [Desulfonatronospira thiodismutans ASO3-1] gi|298510944|gb|EFI34847.1| permease YjgP/YjgQ family protein [Desulfonatronospira thiodismutans ASO3-1] Length = 390 Score = 127 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 56/364 (15%), Positives = 131/364 (35%), Gaps = 8/364 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK I++ +G FL++ ++ + + +++ ++ + + ++K YL P+ Sbjct: 1 MKILHRQIIKEVGTIFLVTLASMLSLIVIGRMIDLKDIFVGQSIQILYVIKSFFYLGPSF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L MV P + M+ + EL + +G S +L+ L ++ F Sbjct: 61 LSMVIPIACMLSIFLCFLRMSSDRELTALQTSGISIRSLVLSPLLFSLGAMGFTLYVTLH 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSR 179 + ++ + + T ++ +F R+ D+ I + +P + L+ +FI D Sbjct: 121 LTSWGIDNFRETAVEMVREQTEVSMQPGVFHRMIPDMAIYVHNRDPGTSELKEVFISDDT 180 Query: 180 DTQTHKIYYAQSGSIDLDRQ----AIILNDGEVHRKSPISKDISIMKFKSYTLQTESA-- 233 + A +G + D++ IL+DG ++R+ + L S Sbjct: 181 VPEAPLTIVAPTGRMLSDKEEGMLYFILDDGRIYRQDQEEHSLVSFGEYRLRLDLFSLLG 240 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 ++ + + + L ++ E HKR + L +I GL ++ Sbjct: 241 DAGLRDKRPEEMSWGEL-QAYKDDAQADSRQYRLAVLEEHKRFSLPLACLILGLFAVPLG 299 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + + + I + +F + NP + F + ++ Sbjct: 300 LTLQGLGRNWGLLLAMSCFLIYYSLFTAVYGLGEAGTLNPDLAMWMPNIFFLVLTLGGFY 359 Query: 354 IKKK 357 + Sbjct: 360 FYSQ 363 >gi|83945296|ref|ZP_00957645.1| hypothetical protein OA2633_00975 [Oceanicaulis alexandrii HTCC2633] gi|83851466|gb|EAP89322.1| hypothetical protein OA2633_00975 [Oceanicaulis alexandrii HTCC2633] Length = 375 Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 73/348 (20%), Positives = 142/348 (40%), Gaps = 8/348 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y R FL + + +A + Q L ++L++ E+ +L+ I+ +P V Sbjct: 1 MTLFQRYTFRQALWPFLGAMAALTGLAVLTQSLSNLDLMAERGETALVLITITVLAMPQV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + L + ++EL + G SR + P L LAI + + + Sbjct: 61 IALLLPIAVFLAVAIALNRLTSDSELTVAAAAGMSRFQRVSPFLRLAIYVVLVNLVINLF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 ++P ++Q + + L S++ E F L D + + + + ++ L +FI+D R Sbjct: 121 VQPASFRLMRQQLFEIRTDLAASFMREGEFVPLGDQVTFYVREISDDSVLNDVFIMDDRT 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFK--SYTLQTESANSS 236 Y A+ G I ++L DG + S ++ + F L N++ Sbjct: 181 -GQSAAYAARRGRIAATDRGPVMLLEDGVRTQVD-QSGVLTNLSFDSTKVELTLFVDNTA 238 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 ++ K +D+ L LL P P + +E H RL+ L+ + F L +AA Sbjct: 239 SLFFKESDKYLPELLRPTPADIARAG-GKGRLYAEGHYRLSAPLYNLAFAL-IALAAYMS 296 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 R+ + I+ + + + I E + + YL Sbjct: 297 GEHRRIGYGRNLIIAGASAVVLRLTGFAIQAAAESDDAMNAVQYLVPL 344 >gi|332142604|ref|YP_004428342.1| lipopolysaccharide ABC transporter permease [Alteromonas macleodii str. 'Deep ecotype'] gi|327552626|gb|AEA99344.1| lipopolysaccharide ABC transporter permease [Alteromonas macleodii str. 'Deep ecotype'] Length = 353 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 44/354 (12%), Positives = 126/354 (35%), Gaps = 3/354 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +LYI R + + ++ ++ ++ +I+ ++++ + + +P L Sbjct: 3 KILDLYIARTLLSTITVTLSVLIGLSALIKFVEQLRKIGEGDYDMLAAFIYVLLSLPRDL 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + + + N+EL+++ G SR +I + +++ + + + Sbjct: 63 EQFFPMATLLGGLIGMGVLASNSELVVMQAAGMSRWNIINSAMKSTLVMILAVMAVGEWV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + KQL +A + + L + D D ++ I + ++L+ + I + Sbjct: 123 TPFSETKAKQLRTEAISGGSLFS-SDKLVWAKDGDRFVSIGQVISQDSLKDVSIFNFNSD 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + + S D L++ EV + + + + + +K Sbjct: 182 LSLQSITYAKNS-TYDGDGWWLSNVEVTQFTETQVSVDDTDRMRWNSTLTPDKLGIVAVK 240 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 +++ LL+ N + + Y +++ Q + + L+++ Sbjct: 241 PEALSITGLLD-YVNYLDNNDQDPSRYELALWRKIFQPISVGVMLLMALSFIFGPLRSVT 299 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + F + + + Q P ++ L L + +++ + Sbjct: 300 MGARVIMGVLTGFGFFILNEVFGPVSLVYQLPPFLGALLPSLLFAAVAGVMLRR 353 >gi|194337384|ref|YP_002019178.1| permease YjgP/YjgQ family protein [Pelodictyon phaeoclathratiforme BU-1] gi|194309861|gb|ACF44561.1| permease YjgP/YjgQ family protein [Pelodictyon phaeoclathratiforme BU-1] Length = 359 Score = 126 bits (315), Expect = 5e-27, Method: Composition-based stats. Identities = 53/354 (14%), Positives = 117/354 (33%), Gaps = 2/354 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YIL ++FL + + + +I ++++++ L ++ IP++ Sbjct: 1 MKILNKYILGQFAKAFLFTSIAFACLFILINMVEKLDEFIDKKLGLWQIVHYYLLSIPSI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L +V+P + + V ++ + EL I + G S L+ P + +L+ +F ++ Sbjct: 61 LLVVSPVSALLSSILVAGKLSFSGELPAIRSAGVSMRQLLTPFITGGVLILLFNLLNAGW 120 Query: 121 IEP--KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 I P + + + + + + + I + Sbjct: 121 ISPSTFAEKNHFEQRYLKRNPAQPQENRNIHILEPGNRMLSIGTLDPDQAEISAVSIEEF 180 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + A S + IL + + + + S L + S + Sbjct: 181 SGARLKSRTDADSMRYNQKTGEWILLNAAKRSFTGKDETFHLTPVTSVKLALSPRSLSEL 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 L+ ++ NL LE +FH ++ +I LI + + K+ Sbjct: 241 NLQPDEMNLIRHYRYLTEKEGAGFAGLERSTVKFHNKIALPFASLIIILIGVPLSAKKKR 300 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 +I + + GV + ++ NP L LF + Sbjct: 301 GGLASEISITLFAGFLFMGVQKTIAIAGYQGMINPMLAAWLPNILFLGIGYAIY 354 >gi|227824355|ref|ZP_03989187.1| permease [Acidaminococcus sp. D21] gi|226904854|gb|EEH90772.1| permease [Acidaminococcus sp. D21] Length = 362 Score = 126 bits (315), Expect = 6e-27, Method: Composition-based stats. Identities = 45/365 (12%), Positives = 115/365 (31%), Gaps = 13/365 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPT 59 M+ + YIL+ + + F I + + ++ S + L ++ L+P Sbjct: 1 MRILDKYILKQMLQPFAFGVAAFSTIFVASSFLFRVTQYITQYGASYSSLFRLFLCLMPE 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 V+ P + + + ++ N+E+ + + G S + P+L ++S+F + Sbjct: 61 VINYTFPMSMLLASLLTMGQLSGNSEITAMRSGGMSFRRIAMPILAAGFVVSLFSVVWAE 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEEN---LFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + P ++ +++ + T +++ + ++ I Sbjct: 121 KVVPPAKAEYERIIQQEIKNNTKPRTQDHILLKNISKGQLTRLTYARTFDEKAGVMKDIT 180 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + ++ I+ G + + M F L + Sbjct: 181 IEDWDKGRVVRIQRTPEAKWQNGTWIMEKGTITEITNEEGLTRTMTFDKQVLPITETPKT 240 Query: 237 TI--VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 ++ + L + + Y E + R T L F LI + Sbjct: 241 ITLDQKDPDEMTIGEL-KMYIGILERQYQPTSKYVMEIYSRFTVPLASFFFALIGVPLGV 299 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLL 352 ++ + S+ I F + +++ + Q P + + F Sbjct: 300 ---QSQRAGTSMGLGFSVVIIFIYYSIMTFMTG-LGQGGVIPPFIAAAVPNFLCGCAGAY 355 Query: 353 MIKKK 357 +I +K Sbjct: 356 LIWQK 360 >gi|226940337|ref|YP_002795411.1| permease YjgP/YjgQ [Laribacter hongkongensis HLHK9] gi|226715264|gb|ACO74402.1| permease YjgP/YjgQ [Laribacter hongkongensis HLHK9] Length = 357 Score = 126 bits (315), Expect = 6e-27, Method: Composition-based stats. Identities = 45/361 (12%), Positives = 121/361 (33%), Gaps = 5/361 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YI + + + L ++ + +L + + S + +L + +P Sbjct: 1 MKILTRYIGGNVIAASIFGLLALLSLFAFFDVLSELTDIGRGGYSFSDVLVVVALKLPRH 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + T ++ + ++E ++ +G S + + + + L ++ F++ Sbjct: 61 AFELMPLAVLIGTMVAMSLLAGSSEYAVMRTSGMSLGQVARILAGIGALFAVLTFVTGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P ++ ++ A+ + + D+ + + P+NTL GI I Sbjct: 121 AAPWAEQASERTKLQSTGAVISGDFRSGAWIKDDNHFIN-VREMLPDNTLLGINIYTYDK 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 +I + L D + R + + + + ST+++ Sbjct: 180 NDRLTDVRYARRAIYQPDGSWQLEDIKETRIEANRTIARDLPSQRWESILQPELLSTLLV 239 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + +++ L + + Y +L L + L+++ R Sbjct: 240 EPERMSVADLGR-YIEHLATNRQNTLRYEIALWGKLFYPLACLTMALVALAF--TPVNQR 296 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL-FCISSIFLLMIKKKYT 359 Q IF+ + I ++ H + P++ L ++ + ++ Sbjct: 297 QSNLGSRIFVGILIGLAFYFINRLFGHLGLLYGWSPPLVTLLPTLIFLAVGTWFLVRQER 356 Query: 360 K 360 + Sbjct: 357 R 357 >gi|37520500|ref|NP_923877.1| hypothetical protein gvip124 [Gloeobacter violaceus PCC 7421] gi|35211494|dbj|BAC88872.1| ycf84 [Gloeobacter violaceus PCC 7421] Length = 387 Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats. Identities = 44/375 (11%), Positives = 124/375 (33%), Gaps = 25/375 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPT 59 + + Y+ + FL I + + + + L+S + L L++ +P Sbjct: 16 LTIMDRYLASELVLPFLFGVAAFASIGMAIGSLFELVRLISENGLPLTTALQVFLLRMPQ 75 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ P T ++ + E+ + +G S + ++ P L L++++S+ F Sbjct: 76 IITYTFPMSVLFATLLAYGRLSGDLEITALQASGVSILRVVVPTLLLSVIVSVITFFFNE 135 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLY-------------IKISKYNP 166 ++ P A+A ++ + + + ++ Sbjct: 136 VVVPTANQEASTTLARAIGGGDRPRFTKDNILYPEYNWVPGKAGEREYALIRLFYARRYS 195 Query: 167 NNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSY 226 + + G+ I+D +++ A S D A +G + +I++F+ Sbjct: 196 DGIMYGLTILDYSQENLNQVITADSAYFDPKTDAWRFRNGTSYLIGNDGTYRNILQFQEQ 255 Query: 227 TLQTESANSS--TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVI 284 ++ V + + L + + +++ Sbjct: 256 QVKISEDPLKFAQEVRRPEEMTTVEL-RRYIELAQNARQEIRGLLVSLYQKYAIPSVCFA 314 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISL-SISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 F L+ R+++ + + + L + ++ F +I + Q P L +L Sbjct: 315 FALVGAPLGL-----RRQRTSNALGLGLSILIIFSYYIFLFIAQALGQTGVLPPWLGAWL 369 Query: 344 FCIS--SIFLLMIKK 356 + ++ ++ + Sbjct: 370 PALITMAVGAYLLWR 384 >gi|262274978|ref|ZP_06052789.1| putative membrane protein [Grimontia hollisae CIP 101886] gi|262221541|gb|EEY72855.1| putative membrane protein [Grimontia hollisae CIP 101886] Length = 357 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 43/357 (12%), Positives = 122/357 (34%), Gaps = 2/357 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +LYI R I + + +V ++ +I+ ++++ V + ++ ++ +P + Sbjct: 3 KILDLYIGRTIIATTSLCLATLVGLSAIIKFVEQLRSVGEGSFTMMTAVQYVLLSMPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L ++ ++EL+++ G S++ + VL A+ L + + Sbjct: 63 EMFFPMAVLLGALIGLGTLASSSELVVMQAAGFSKLDIGLSVLKTAMPLMLVVLALGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + ++L A A+ + ++ + D + + Sbjct: 123 APDAQKAARELRAFAKSGGNVMSVRRGVWAKDGSDFIYIARTDQQESLVGVNIWKFDDTQ 182 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 +A+ ++ N H P+ + + K ++ S + +K Sbjct: 183 TLKAQVFAEQARYLDKDSWMLENVTVTHFDGPVKINETTEKQLAWKTTLTPEKLSIVTVK 242 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + +LS + + + + Y +++ Q L + L+++ Sbjct: 243 PEELSLSGVYS-YVDYLKASEQDASRYELALWRKVLQPLSIGVMMLLALSFVFGPLRSVT 301 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + +F + + + P ++ + + L ++ +K Sbjct: 302 MGARVLSGVIFGFAFYISNEVFGPMTLVYNLPPFVGAIA-PSLAFIGVTLYLLNRKL 357 >gi|196228189|ref|ZP_03127056.1| permease YjgP/YjgQ family protein [Chthoniobacter flavus Ellin428] gi|196227592|gb|EDY22095.1| permease YjgP/YjgQ family protein [Chthoniobacter flavus Ellin428] Length = 380 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 60/368 (16%), Positives = 115/368 (31%), Gaps = 12/368 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+LR FLM + I +I + N + +L+ +PTV Sbjct: 1 MNILDRYVLRSFIEPFLMCLAGFIAIWLIIDVSDNFNDFIEAHARFRTILEYYVTQLPTV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + L+ M+R EL+ G S + ++ P++ + +L++ F F Sbjct: 61 ILMSLPVGLMLGLLFSLSRMSRTNELISQLTAGRSVVRVLAPLIGVGVLMTGFCFWLNWE 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEE---NLFFRLDDDLYIKISKYNPNN----TLQGI 173 P S K K + + +E +LF DD + K Sbjct: 121 HAPHAESIKKDAMQKIKRGKRATDVEPVLAHLFRDRRDDRTWYVRKLIFQPGEERMQGVH 180 Query: 174 FIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKS-----YTL 228 K +YA S D +Q L G++ P F Sbjct: 181 VTQQDETGHILKKWYASSVYYDPAKQEWKLEKGKIVTFKPDGDVEDQDLFLRGFRIIKDW 240 Query: 229 QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 ++ L ++ L N ++ L YR+ R ++ + Sbjct: 241 PETPWRVASTELNPGGLSVHELHEYLKYNSDFPAVQLAPYRANLADRYALPFQCLLAVFL 300 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 + + + L + F + + +P + P + + I Sbjct: 301 AAPLGIVYNRRGVIGGVTAAMVLLVLMIMSHSFFVMLGKGMRMDPNFSPWVPVIGLGIIG 360 Query: 349 IFLLMIKK 356 + L+ + Sbjct: 361 LVLMYYRS 368 >gi|90416560|ref|ZP_01224491.1| hypothetical protein GB2207_05142 [marine gamma proteobacterium HTCC2207] gi|90331759|gb|EAS46987.1| hypothetical protein GB2207_05142 [marine gamma proteobacterium HTCC2207] Length = 370 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 48/369 (13%), Positives = 118/369 (31%), Gaps = 24/369 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R I + C+ ++ + + ++ + + N + + GY IP+ L Sbjct: 2 IIFRYLCREILSATTAVCVILLLVLMSGRFVKYLGKAVAGDMDSNSIFAMIGYRIPSFLE 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P F + + E+ ++ G S L+ L +A + ++ + Sbjct: 62 LTLPLAFFLAVLLSFGRLYVQNEMSVLKACGVSERRLMGYTLIIASVFALATGWLSLSVS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFR-LDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + L + L F+ + L IF+ + + Sbjct: 122 PSGMTKAEALFDAEKSRSELDKLMPKKFYSLSGGKGVTYAEAVTEDRELDEIFLAMTAGS 181 Query: 182 QTHKI-----YYAQSGSIDL----DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 + A G + +++ G P D I +F+ Y + E Sbjct: 182 DENSDRRLILVLADKGRQQQAENSSERYLVMESGYRIEGVPGQNDYQITRFEEYGSRLED 241 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + S K + LL ++ RL+ L ++ ++++ Sbjct: 242 SAPSIRKTKTDAMATGLLL----------GSNDPELQATLQWRLSIPLMVLVVTILAVPL 291 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL-FCISSIFL 351 ++ + + ++++ F + + +E I + L + I + Sbjct: 292 ---SRTNNRQGRYGKLLPAIALYFTYLVALNAMRGALESGAIPISVTLLPVHAVYLGIAV 348 Query: 352 LMIKKKYTK 360 L+++ K Sbjct: 349 LLLRSGGPK 357 >gi|313894646|ref|ZP_07828209.1| permease, YjgP/YjgQ family [Veillonella sp. oral taxon 158 str. F0412] gi|313440836|gb|EFR59265.1| permease, YjgP/YjgQ family [Veillonella sp. oral taxon 158 str. F0412] Length = 363 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 48/368 (13%), Positives = 121/368 (32%), Gaps = 13/368 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPT 59 M+ + YIL+ FL I + + ++ L +++K +P+ Sbjct: 1 MRLLDKYILKAFVGPFLFGVFAFTSIFIGTGTLFRIAQYITEYGAPLLLVMKAFVLALPS 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ + P + + + ++ +E++++ G S + L PV +A+++SI Sbjct: 61 IVILTFPMSVLLASLMTFSRLSSTSEIVVMRAGGLSFLRLAMPVYIIALMISIGAVAFNE 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENL----FFRLDDDLYIKISKYNPNNTLQGIFI 175 + P+ + + + + + ++ + + YN + Sbjct: 121 FVVPRTNHMYQTIVREEIMKNATPQTQNHIVLKAMNGDELGTLMYAKSYNAETKQLSMIT 180 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE--SA 233 V + + + Q ++ +G ++ S MKFK +L + Sbjct: 181 VQQFGEGGKLQQVENADTAIWNGQYWVMQNGIIYDVSAGDGVERTMKFKEQSLPIKSAPK 240 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + K + + L + E ++R T L +F L+ Sbjct: 241 DIQQDQRKPEELTIKELRHQIKAYKAAYT-NANKLEMEMYQRFTIPLASFVFALVGAPLG 299 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF-CISSIFLL 352 +QR F + +++G + + +L + + I L Sbjct: 300 L----QKQRSSSSIGFGISILIIFIYYGVMTFAGALGKGGALPTVLAALIPDTLGIIAGL 355 Query: 353 MIKKKYTK 360 + + +K Sbjct: 356 YLNWRVSK 363 >gi|332535154|ref|ZP_08410963.1| hypothetical protein PH505_cf00160 [Pseudoalteromonas haloplanktis ANT/505] gi|332035424|gb|EGI71923.1| hypothetical protein PH505_cf00160 [Pseudoalteromonas haloplanktis ANT/505] Length = 354 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 54/356 (15%), Positives = 126/356 (35%), Gaps = 3/356 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ + Y+ R I ++ + L +V I+ +I+ + ++ V + L + + Y IP Sbjct: 1 MKTLDWYLGRSILQTTGFALLVLVGISTLIKFIDQLKSVGRGSYDLMTAMLYTLYTIPGD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L ++ N+EL+++ G SR+ +I V+ AI +++ + Sbjct: 61 LVVFFPMAALIGGLTGLGALASNSELVVMQAAGMSRLQIIGSVMKTAIFMAVCMMALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + + + + + + D +I I + N L G+ + Sbjct: 121 GAPEAQL-HAKEMRNQAIHGGDVFNTQKGVWAKDGSNFINIEDVDENGRLNGVHMYHFDK 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + ++ ++ +L D + + + Y Q + + + Sbjct: 180 SLELTQITKAKDALSR-KEGWLLRDVNKVIITSEKTTTEQLPEEFYPSQLTAEKLGVVSV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K + + L + TY ++L Q + + L+++ Sbjct: 239 KPESLSFTGL-WSYLTYLEQNEQDTSTYELALWRKLMQPVSVAVMLLVALSFIFGPLRTV 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + I F + + + Q P I + + I LM K+ Sbjct: 298 TMGARIIMGVVTGIVFHLTNEIFGPVVMVYQIPAIIGAVLPSIIFIGFATYLMNKR 353 >gi|320353217|ref|YP_004194556.1| permease YjgP/YjgQ family protein [Desulfobulbus propionicus DSM 2032] gi|320121719|gb|ADW17265.1| permease YjgP/YjgQ family protein [Desulfobulbus propionicus DSM 2032] Length = 508 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 60/365 (16%), Positives = 132/365 (36%), Gaps = 13/365 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 YI + F S L + + ++++++ + +V + L +++ Y+ P +L Sbjct: 34 LLYSYIANELLAPFFASFLILYCVFFLVRLIPLLEVVLALRIGLADFIRLFSYIFPRMLL 93 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P T + + E+L + G S ++ PV+ +A ++ + Sbjct: 94 YIIPMASMAGVIVGFTRLTNDREILALKACGVSLKQMLPPVILIAAAIATLTGFFSIRLI 153 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P KQL + L+ F D+ + + + + G+++ D R Sbjct: 154 PAGALGFKQLMFELAKEKIDKGLKAREFTEALGDIVVYVDEIDDQQRWHGVYVSDMRGRT 213 Query: 183 THKIYYAQSGSIDLDRQAI----ILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 I A+SG ++ + + + +LNDG +H + D +++F Y LQ + I Sbjct: 214 QPLITVAKSGHMEAEMERMTVTIVLNDGTLH--NNEGTDNQVVRFGRYQLQISLRPPTQI 271 Query: 239 ------VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + LL +L + SE+H RL + I ++ + Sbjct: 272 GKEDVTSQTRGAMSQQQLLRAAAKQ-KPNSKLHRIFLSEYHHRLALPVGCFILSILGLPL 330 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 + A R+ I + + + F + + L LF + ++ + Sbjct: 331 GLQAAPGRRAVGIPLGLVVFVLYYIAFTTARVMSEEGTLPLVLGMWLPNILFSVLTVVIF 390 Query: 353 MIKKK 357 + Sbjct: 391 WRVNR 395 >gi|225871810|ref|YP_002753264.1| permease, YjgP/YjgQ family [Acidobacterium capsulatum ATCC 51196] gi|225794430|gb|ACO34520.1| permease, YjgP/YjgQ family [Acidobacterium capsulatum ATCC 51196] Length = 772 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 51/359 (14%), Positives = 121/359 (33%), Gaps = 8/359 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ YILR I L+ F+ ++ + + L ++ S+ + + ++P + Sbjct: 1 MRILTRYILREILSHGLIGGALFTFVLFMPNLGDLLELAVRNSSSMGAVGEAFLLMLPNI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +V P + L+ + ++E+ + +G + V +A ++ Sbjct: 61 FVVVIPMSVLVGILLGLSRLAADSEVTAMRASGIGVWRFVGIVSVIACAAWGLGLVNSLY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN---TLQGIFIVD 177 + P L A ++ +F+ + + + +FI + Sbjct: 121 LAPWSSRQTIHLEQSLANAQASYEVQPRVFYEDFKNYVLYVEDVKAGRGAARWGKVFIAN 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAII---LNDGEVHRKSPIS-KDISIMKFKSYTLQTESA 233 + I A+S ++ I L+DG H+ SP D ++ F + + Sbjct: 181 LTNPDAPSITTAESATVINGPNQTILMRLHDGAQHQLSPTEPGDYNLSTFTETDVPLRTG 240 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + + D+ + + N ++ + + E KRL ++ L+ + Sbjct: 241 SQEDVRFHRTDKRILAMTNRELIERSH-GKGGTWFFIELQKRLAYPTACLVLMLVGVPLG 299 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 + + I + + + + + + P + LF IFLL Sbjct: 300 MSSRRGGKSGGFVITIALVFIYYFLSSTGTALARQGKIPPLIGVWMANVLFAGCGIFLL 358 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 50/366 (13%), Positives = 125/366 (34%), Gaps = 17/366 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y++R R F+M + V + + + + + SL ++ + L P+++ Sbjct: 408 LLDEYVIREFLRVFVMVLVSFVMLMLFFTFFELVGDIIRNHSSLLVVGEYLIDLTPSMIY 467 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++TP + V MNR++E+ + TG S ++ P++ +A L+++ LF Sbjct: 468 LITPLAVLIAVLVVFGLMNRSSEITAMKATGISLYRIVLPIMVIASLMAVGLFFFNEYYV 527 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD---------DLYIKISKYNPNNTLQGI 173 P+ + L + + + + Y + Sbjct: 528 PQANRKQQALRNEIKGLPAQTTSHPGEQWMFGKREPGHPGMIFYYQYFDPDTNTFLNLTV 587 Query: 174 FIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTES 232 F D + K +AQ S D IL DG + + + E+ Sbjct: 588 FEFDPQSFTLMKRTFAQMASWDQKDHRWILQDGWTRTFENHEIQSYQPFAVTTLPEMIET 647 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + + + + L + + R + ++L L ++ ++++ Sbjct: 648 PHYFEKDFRQSTEMSFAQLRHYIADLSQSGFDTVRLRVQLDRKLADPLITLVMAVLAVPF 707 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF---LFCISSI 349 A +R + + +++ ++ +W S + L + + + Sbjct: 708 ALSMG---KRGSLAGVSVAIGVAIA-YWLISGTFEAMGDVSMLPAFLAAWSPDILFALAG 763 Query: 350 FLLMIK 355 L+++ Sbjct: 764 TYLLLR 769 >gi|212636935|ref|YP_002313460.1| permease YjgP/YjgQ [Shewanella piezotolerans WP3] gi|212558419|gb|ACJ30873.1| Permease YjgP/YjgQ [Shewanella piezotolerans WP3] Length = 371 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 57/350 (16%), Positives = 129/350 (36%), Gaps = 22/350 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R + ++ + L ++ I ++ + S ++++ + G +P ++ Sbjct: 2 IVFRYLIREVLKAQIAVLLVLLAIFISQHFVRVLADASDGEFPASLVMTLLGLNMPFLIV 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + M E++I+ G S + + L LA++ IF + Sbjct: 62 LVLPLSLFLGILLAHGRMYSENEMVILHGVGISEWYITRVTLLLAVVNMIFTGFLSIYVT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-----D 177 P Q+ AQ + L + F + + + + V Sbjct: 122 PWAEERQNQVLEHAQSEAGIAALTQGRFQTSPNGRAVLFVERIGRDNKLDKVFVAQLPDP 181 Query: 178 SRDTQTHKIYYAQSGSIDLD---RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 +T + A+SG + D Q + L DG ++ SP D +++F Y ++ + Sbjct: 182 DDETGLANVVVARSGKVVEDATGGQRLQLEDGVQYQGSPRRVDYQVVEFGGYQMEIKDQE 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + K + + L++ + +EFH RL L + LI++ A Sbjct: 242 AGERRRKLSALPIDQLMDID----------TPEATAEFHWRLAIPLAIPLMTLIAVPMA- 290 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 + ++ K +F ++ + G ++G K ++ L ++ Sbjct: 291 --RVNNRQGKFAKMFPAILLYLG-YFGLMVAGRKSLEDGVIPEFLGMWWI 337 >gi|95928709|ref|ZP_01311455.1| permease YjgP/YjgQ [Desulfuromonas acetoxidans DSM 684] gi|95135054|gb|EAT16707.1| permease YjgP/YjgQ [Desulfuromonas acetoxidans DSM 684] Length = 395 Score = 125 bits (313), Expect = 9e-27, Method: Composition-based stats. Identities = 76/366 (20%), Positives = 149/366 (40%), Gaps = 18/366 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + YI R I FL+S + F+ + ++L+ I +V +++ +L + L+P+ Sbjct: 5 RLQTYISREIIAPFLLSLVLFTFVLLLSRLLKLIEMVVDKGVAVSEILHLFACLLPSFFV 64 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P F + ++ ++E++ + G S L +PVL +A+L+ F + E Sbjct: 65 ITVPLSFLLAVMLAFGRLSADSEIVAMKAAGFSLYRLSQPVLIIALLVCGFTAYLTLVAE 124 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSRDT 181 P R +KQ + L+ +F D L + + + NT+ G+FI D R Sbjct: 125 PAGRVKLKQRLIDIAYSKAAVALQPQIFNEEFDGLMMYANDVDNQTNTMTGVFISDERMG 184 Query: 182 QTHKIYYAQSGSIDLDRQA----IILNDGEVHR--KSPISKDISIMKFKSYTLQTE---- 231 T I AQ G I DR + L DG +HR + ++ F+SY + Sbjct: 185 NTPSIIVAQRGEIRSDRTNGSLLMHLRDGSIHRPVIRSGKRSYQVVDFQSYDVNLSLNTA 244 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 ++ LK + L+ +P + R E +RL P+IF L+++ Sbjct: 245 DKEEKSLNLKPKEMTTKALMQADPELSEEKQRER---RVELMERLVLPFSPLIFALLAVP 301 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIF 350 + + ++L I + S +++N + + L+ + Sbjct: 302 LGIRSHRSPKGGGFS---VALFIFLLYYLCLSVAKTMVQENNWPLLGSLWGPSVAFIVVG 358 Query: 351 LLMIKK 356 +L++ + Sbjct: 359 ILLLIR 364 >gi|148261611|ref|YP_001235738.1| permease YjgP/YjgQ family protein [Acidiphilium cryptum JF-5] gi|146403292|gb|ABQ31819.1| permease YjgP/YjgQ family protein [Acidiphilium cryptum JF-5] Length = 386 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 55/352 (15%), Positives = 138/352 (39%), Gaps = 7/352 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y+ R + +S L +V + W+ Q L+ I L+ S + L ++G L+P+ + Sbjct: 20 TRLDRYVFRQLLIGLAVSTLGLVALVWLTQSLRFIQLIIQHGLSPVVFLHLTGLLVPSFV 79 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 ++ P + V + + EL ++ +G S + +P L LA+L + + + Sbjct: 80 AVILPITCFIVILFVYARLAADRELTVMRASGMSDAAIARPALALAMLTMLACWGLNVWL 139 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + + + LE +F + + + + + + + L GI I D+R Sbjct: 140 VPSTLARFTHFESIIRNQVAAFLLEPGVFTPIPGHITVYVQRRDHDQVLHGIVIQDARQK 199 Query: 182 QTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 A+SG + D ++L DG + P + ++I+ F+ + T Sbjct: 200 GEPATILARSGRLIDGPDGPEVLLLDGSREQVDPKTGRLNILSFRRNLISLAKPTGVTRK 259 Query: 240 --LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 K ++ ++ L + + + + + + + +I++++ + Sbjct: 260 LAPKTSEATMTQLFHAGAAHVPPPVQRRWREEAWRR--IASPFAVLSYAVIALLSVLRSP 317 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 R++ + ++ I G+ + + IP+++ + + Sbjct: 318 F-RRQGGAAALVAAVFIVMGLVALELGTENLAARQNGLIPLIFAVTLGPALV 368 >gi|170725439|ref|YP_001759465.1| permease YjgP/YjgQ family protein [Shewanella woodyi ATCC 51908] gi|169810786|gb|ACA85370.1| permease YjgP/YjgQ family protein [Shewanella woodyi ATCC 51908] Length = 370 Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 54/351 (15%), Positives = 127/351 (36%), Gaps = 23/351 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R + ++ + ++ I ++ + S ++++ + G +P + Sbjct: 2 IVFRYLIREVLKAQIAVLFVLLAIFISQHFVRVLANASDGEFPASLVMTLLGLNLPYLAV 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P F + M +E++I+ + G S + + L LA++ + + + Sbjct: 62 LVLPLSFFLGILMAHGRMYAESEMVILHSVGVSEWYITRVTLLLAVINMLITGVLAVYVT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI-----VD 177 P Q+ AQ + + + F + + + + Sbjct: 122 PWAEERQNQVLEHAQSEAGLAAITQGRFQTSPNGRAVLFVERIGRDNELDKVFVAQLPDP 181 Query: 178 SRDTQTHKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + I AQ G + D Q + L DG ++ +P D +++F Y +Q + Sbjct: 182 EAEQGQSNIVLAQGGKVIEDETGGQRLQLRDGVQYQGTPKQVDFQVIEFGGYQMQIKEQE 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + K + + L+ + ++EFH RL L + LI++ A Sbjct: 242 VNERRRKLSALPIEELM----------KQEGPESKAEFHWRLAIPLSIPLLTLIAVPMA- 290 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFL 343 + ++ K +F ++ + G F + P Y+ + ++ L Sbjct: 291 --RVNVRQGKFAKMFPAILLYLGYFGLMIAGRKALEDGIIPGYLGMWWIHL 339 >gi|116074701|ref|ZP_01471962.1| possible permease [Synechococcus sp. RS9916] gi|116067923|gb|EAU73676.1| possible permease [Synechococcus sp. RS9916] Length = 389 Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 49/376 (13%), Positives = 136/376 (36%), Gaps = 22/376 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQ-ILQRINLVSSSTESLNILLKISGYLIPTVL 61 + +++ + + + ++ + + + + + S + I L++ +P+ L Sbjct: 18 LLDRWLISELVGPLIFAIAAFTVVSLSVGVMFELVRKIVESGLPVLIALQVLLLRLPSFL 77 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P M T + ++ N+EL + + G + +I P L L+++++ F+ ++I Sbjct: 78 VISFPMATLMATLLAYSRLSANSELTALRSVGVTARRMIAPALALSLVMTTLTFVFNDVI 137 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-------------YIKISKYNPNN 168 P+ + +A + +++ + L + ++ Sbjct: 138 VPRANRNAEVTLQRALGKAIATEKGDDIVYSRFGRLAGADEGDRTRGLAQLFYAREFRKG 197 Query: 169 TLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 T+QG+ ++D ++ A + +G+ +P I+ +F Y Sbjct: 198 TMQGVTLLDFSRVGFTQMLVADEAKWNDKEGKWEFLNGQSVTLTPEGGTIT-AQFDRYLY 256 Query: 229 QTESANSSTIVLKANDQNLSFLLNPNPNNPNYR---PELLETYRSEFHKRLTQWLFPVIF 285 +A L + N++ L + R ++ T + ++F Sbjct: 257 PLSAAPVRIAKLPKDANNMTVLEAVEAEQLLRDAGDRKEARRLRVRIQEKFTLPMACLVF 316 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC 345 GLI K + + IS+ + V++ S+ + P+L ++ Sbjct: 317 GLIGSSLGAKP--NNRTSRSQGFGISVVL-ILVYYVLSFSFSSLGVKGTLPPLLAAWMPV 373 Query: 346 ISSI-FLLMIKKKYTK 360 + S+ + ++ ++ Sbjct: 374 LISLAGGWTLLRQASR 389 >gi|170288881|ref|YP_001739119.1| permease YjgP/YjgQ family protein [Thermotoga sp. RQ2] gi|170176384|gb|ACB09436.1| permease YjgP/YjgQ family protein [Thermotoga sp. RQ2] Length = 1061 Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 61/356 (17%), Positives = 123/356 (34%), Gaps = 6/356 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+L+ FL+ + + + Q +L+ + L + Y +P Sbjct: 1 MKVLIKYLLKLSVVPFLIGLGGFIVFVSLEILYQLSDLIVRHRVGIEKLFLMLYYYLPYF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + ++ EL+ I G S+ LI P L L LLSI +F + Sbjct: 61 VAMGVPVGVLLAIFWTFSRLSEERELMAIQVHGISQKNLIVPFLILGALLSIAVFFLSDQ 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P+ +S ++ +K L ++ EN+ ++ DD Y + KY+ + ++ Sbjct: 121 IVPEYQSKAEEAMSKYVLKKPEVFVVENVISKIGDDQYFYVEKYDERTSTMWNVVIFRYG 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS--TI 238 + + + + L DG + + F L + Sbjct: 181 HEETIV---TAKRVQKKGNDWYLFDGNYYTVDKDGFLKLDVHFSEMKLDITEDIEKLLRV 237 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + L + + E H R L P++ L+ + + L Sbjct: 238 GKTPREMTGRELKEKIEFFKKVGVK-PSPWVVELHSRYANSLTPIVIVLVGVPLSLLFQL 296 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + + F+ + + G S + + +P P + +F I L ++ Sbjct: 297 RSKSWGVIFTFVLVVLYQGSGAWLSAMGKENLLDPVLAPWIPNIVFTIVGTLLFIL 352 >gi|309390182|gb|ADO78062.1| permease YjgP/YjgQ family protein [Halanaerobium praevalens DSM 2228] Length = 366 Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 57/368 (15%), Positives = 125/368 (33%), Gaps = 18/368 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPT 59 MK+ YI + + F I ++ + + + L+K+ +P Sbjct: 1 MKTLNKYIYKELIAPFFFGVAAFTGIFIGTDLIFELTEFYTKWGVEVFTLIKLFFLKLPE 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ + P + T ++ ++E+ + G S + L+ P L L +L S Sbjct: 61 IIVLTFPMASLLGTIMAYNRLSGDSEITAMRAGGVSILALVMPALILGLLTSGVTIGISE 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-------LQG 172 + P +Q+ +AQ + +LF D + ++ ++ Sbjct: 121 FLVPNANYQAEQIMYQAQHGEQRPETQYDLFLTPMDSRTRRPDYMLYAHSFNGDSGIMKD 180 Query: 173 IFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD--ISIMKFKSYTLQT 230 + + D + + A+S D DG ++ ++ + ++S Sbjct: 181 VVVQSFEDGKPDSVLEAESAEWLSDG--WHFYDGIIYFLDRENRQPALEFSTYRSREEIH 238 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 + + ++ N+ L N + + R EFH R + L IF L++ Sbjct: 239 SPTQAGKLGKDIDEMNIREL-NEHIALKEEQGRQAYAERVEFHHRFSIPLASFIFALLAA 297 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--FCISS 348 K R IS+ + F +++ + + P L +L I Sbjct: 298 PLGIKP--QRSAGSATGFGISIIVIF-IYYVLMTVGDALGSQGTIEPWLGAWLQNIVIFV 354 Query: 349 IFLLMIKK 356 + L ++ K Sbjct: 355 VGLALLFK 362 >gi|118580061|ref|YP_901311.1| permease YjgP/YjgQ family protein [Pelobacter propionicus DSM 2379] gi|118502771|gb|ABK99253.1| permease YjgP/YjgQ family protein [Pelobacter propionicus DSM 2379] Length = 382 Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 61/362 (16%), Positives = 145/362 (40%), Gaps = 11/362 (3%) Query: 1 MKS-FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPT 59 MK L I+R I FL+ + + ++++ +V S +L + ++ L+P+ Sbjct: 1 MKRTLYLSIIREITSLFLLGLGIFTLVLLMGRMIKLTEMVISRGVALADMGRMIICLMPS 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 L P F + ++ ++E+ ++ G S + ++ PVL A++ + + Sbjct: 61 FLVYTIPMAFLLAVLLTFGRLSADSEITVMKACGISLVQIMPPVLLCALVAATLGLYAGV 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDS 178 + P +S S + E +F+ + + Y+ +TL G+ I D Sbjct: 121 VGVPWGNRAFAAMSFDMLSQNVSSTIREKVFWDDIPGIVLYTDHYDEERHTLSGVVINDE 180 Query: 179 RDTQTHKIYYAQSGSI----DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 R+ +A SG + + +IL G +H + ++ F Y + + Sbjct: 181 RNASRPLTIFASSGLVAGGANPRDVRLILRSGSIH-AQGRGGEYRLIHFAEYVMNIAAPG 239 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + V +A + L+ + +P+ +P+L + +E H R ++F ++++ Sbjct: 240 GTDTVTRAPREMTVTELHRSIASPSTQPKLRKKMATEMHSRFALPFASLVFAVLAVPLGL 299 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFLLM 353 R+ + IS+ + + S + E+ + P+ L++ + ++ Sbjct: 300 ---QNRRSARSFGFAISIGVLLAYYILLSLLGTMAEKGSFPAPLALWIPNMVFLVLGWVL 356 Query: 354 IK 355 ++ Sbjct: 357 LR 358 >gi|148270164|ref|YP_001244624.1| permease YjgP/YjgQ family protein [Thermotoga petrophila RKU-1] gi|281412494|ref|YP_003346573.1| permease YjgP/YjgQ family protein [Thermotoga naphthophila RKU-10] gi|147735708|gb|ABQ47048.1| permease YjgP/YjgQ family protein [Thermotoga petrophila RKU-1] gi|281373597|gb|ADA67159.1| permease YjgP/YjgQ family protein [Thermotoga naphthophila RKU-10] Length = 1061 Score = 125 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 61/356 (17%), Positives = 123/356 (34%), Gaps = 6/356 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+L+ FL+ + + + Q +L+ + L + Y +P Sbjct: 1 MKVLIKYLLKLSVVPFLIGLGGFIVFVSLEILYQLSDLIVRHRVGIEKLFLMLYYYLPYF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + ++ EL+ I G S+ LI P L L LLSI +F + Sbjct: 61 VAMGVPVGVLLAIFWTFSRLSEERELMAIQVHGISQKNLIVPFLILGALLSIAVFFLSDQ 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P+ +S ++ +K L ++ EN+ ++ DD Y + KY+ + ++ Sbjct: 121 IVPEYQSKAEEAMSKYVLKKPEVFVVENVISKIGDDQYFYVEKYDERTSTMWNVVIFRYG 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS--TI 238 + I + + L +G + + F L + Sbjct: 181 HEETII---TAKRVQKKGNDWYLFNGNYYTVDKDGFLKLDVHFSEMKLDITEDIEKLLRV 237 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + L + + E H R L P++ L+ + + L Sbjct: 238 GKTPREMTGRELKEKIEFFKKVGVK-PSPWVVELHSRYANSLTPIVIVLVGVPLSLLFQL 296 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + + F+ + + G S + + +P P + +F I L ++ Sbjct: 297 RSKSWGVIFTFVLVVLYQGSGAWLSAMGKENLLDPVLAPWIPNIVFTIVGTLLFIL 352 >gi|193212079|ref|YP_001998032.1| permease YjgP/YjgQ family protein [Chlorobaculum parvum NCIB 8327] gi|193085556|gb|ACF10832.1| permease YjgP/YjgQ family protein [Chlorobaculum parvum NCIB 8327] Length = 383 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 45/344 (13%), Positives = 105/344 (30%), Gaps = 5/344 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + YI+R F S + +I +++ ++ S + ++ +P Sbjct: 26 LSIIDRYIIRQFLTIFFFSLASFAALFIIINLIENLDRFMSRQIPVGQIIIYYLSGLPDT 85 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +P + + V ++ +EL + G S L+KP L ++ F ++ Sbjct: 86 FLLTSPLSVLLASLFVTGKLSMQSELPALKAAGMSLSRLMKPFLLATFFITAFNLVNSCF 145 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P K + + E + + + + + Sbjct: 146 ITPAMYDLSKGYEKRYLKSQKEQQEEAVHIRESKNRILTVGQINRDRQSAVSVSLETFDG 205 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDI-SIMKFKSYTLQTESANSSTIV 239 ++ A S I + + + + + + + + + L + I Sbjct: 206 SRLASRLDADSLRISSNGRHWVFYNTKQRTFVNGRETLVANPGADTLKLALAKNTFTMID 265 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 ++ NL L LE E ++ L ++ LI + Sbjct: 266 ADPDEMNLVQHLAFIAQKKRSGLPGLERAEVELQTKIALPLASMLIVLIGVPL---STRK 322 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 ++ SL I + G I + + P+L +L Sbjct: 323 KRSGLALEAATSLLIG-LFYLGMLKTIGSLGYDGLINPVLAAWL 365 >gi|332142603|ref|YP_004428341.1| permease YjgP/YjgQ [Alteromonas macleodii str. 'Deep ecotype'] gi|327552625|gb|AEA99343.1| permease YjgP/YjgQ [Alteromonas macleodii str. 'Deep ecotype'] Length = 366 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 54/364 (14%), Positives = 124/364 (34%), Gaps = 22/364 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+L+ +S L ++ I ++ ++ + S ++L G P + Sbjct: 2 LIFRYLLKETLKSQLAIFFILMAIFVTLRFVRVLGDASDGDIPAGLVLGFLGLYAPILSS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + + ++E+ ++ G S + + +LFL++L+ I Sbjct: 62 LVLPISAYLGIMLAHGRLYVDSEMTVMRACGISEWYVTRVMLFLSVLIMIVTGAITLYFA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD----LYIKISKYNPNNTLQGIFIVDS 178 P QL KA+ S L F + ++ + K + + S Sbjct: 122 PLAAENEYQLREKARNEAGISALMPGRFQQTGNEKAVIFVHDVDKNDKLQRVFLSQNQTS 181 Query: 179 RDTQTHKIYYAQSGSIDLDRQAI---ILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 ++ YAQ+G + + +L G + K ++F Y +Q + Sbjct: 182 DSEGDVRVVYAQTGEVASNPDGTRNLVLKQGVQYEGIQSEKAYRKVEFDEYQIQIADKPA 241 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 K + S L + R+E R+ L LI++ Sbjct: 242 DETRRKVSVLPTSELWEDDSIEA----------RAELQWRIAIPLSIPFLILIAVPL--- 288 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLM 353 A+ ++ + +F ++ + G F + + P + + ++ + L+ Sbjct: 289 SAVDPRQGRFGKMFPAILLYLGYFLLLLASRRVLEDGKMPPQLGLWWVHTIMLIIGITLI 348 Query: 354 IKKK 357 ++ + Sbjct: 349 VRDR 352 >gi|153004268|ref|YP_001378593.1| permease YjgP/YjgQ family protein [Anaeromyxobacter sp. Fw109-5] gi|152027841|gb|ABS25609.1| permease YjgP/YjgQ family protein [Anaeromyxobacter sp. Fw109-5] Length = 370 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 55/369 (14%), Positives = 130/369 (35%), Gaps = 14/369 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ Y+ + I F LF+ I Q+L + +++ S SL + + YL+P Sbjct: 1 MRLLHRYLAKEILLPFAAGLLFLTQILLATQLLAQADVLFGSGVSLVDVGAVVLYLLPYF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V P F + + + + E++ + G S L+ L + + ++ Sbjct: 61 LGYVLPIAFLLGAVLGVGRLAEDREVVALGAAGFSPAFLVPVPLAIGVAVAGLGLWLSLD 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ + + + + F+ + + + I D D Sbjct: 121 VVPRSLDAARLRLNEIVKRNVMNDVRPGTFYDQIPGYTLYA-ERVHGGRWGNVLISDRSD 179 Query: 181 TQTHKIYYAQSGSIDL----DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + A++G ++ + ++L+DGEVHR+ + + + F+ + + Sbjct: 180 PAAPVLALARAGGLEPVGAGEEMRLVLDDGEVHREQVDADEYVLATFRRADVVLGLGTAL 239 Query: 237 TIVLKANDQNLSFL--LNPNPNNPNYRPELLETYRSE--FHKRLTQWLFPVIFGLISIVA 292 + + L L + + R+E H+R+ L + F L+++ Sbjct: 240 SDRNAVSRTGRDDLAGLQARVAEARAKGDAAAARRAEGSLHRRIASPLAVIPFALLAVPL 299 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY-LFLFCISSIFL 351 R+ + + + + + ++ P+ L +S+I L Sbjct: 300 G----ASRRAGRAFGVGATFLVVVAHYLLLRSGEVMAQRGVLPAPLALQLPTLVLSAIAL 355 Query: 352 LMIKKKYTK 360 +I + + Sbjct: 356 ALIALQVRR 364 >gi|94968543|ref|YP_590591.1| YjgP/YjgQ family protein [Candidatus Koribacter versatilis Ellin345] gi|94550593|gb|ABF40517.1| transporter, YjgP/YjgQ family [Candidatus Koribacter versatilis Ellin345] Length = 792 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 54/363 (14%), Positives = 136/363 (37%), Gaps = 15/363 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + ILR F+M V +A V + + + + S+ +L L P+++ Sbjct: 432 LLDDMILRDFLLYFVMVLTTFVMLALVFTFFELLGDIVKNRVSVVMLGDYLLNLSPSLIY 491 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++TP + M R+ E+ + TG S + PV+ +A +++ LF+ + + Sbjct: 492 LMTPLSVLLAVLVTFGLMQRSNEITAMKATGISIYRVAFPVIAIAGVVAASLFVFDQLYI 551 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQG----IFIVDS 178 PK + L + + +YL + + + I + + + IF D Sbjct: 552 PKANKRQETLRNEIKGKPPQTYLRPDRKWIFGSNNTIYYYEVYDADQNRFGGISIFQFDP 611 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--- 235 + YAQ + Q + G + + + S F+ T+ + Sbjct: 612 KTFALQSRIYAQHAHWEDGLQKWVFEQGWMRKLN-GSAIEEFKPFEVETIALAAEPPAYF 670 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 V ++ + + LL ++ + +R + +K+L + ++ +++I + Sbjct: 671 KKEVRQSQEMDYQELLR-YIHDLQQSGFDVVRFRVQLYKKLAYPIITLVMAILAIPFSVY 729 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF---LFCISSIFLL 352 R+ + + ++ I+ ++W + + + +L + L + + Sbjct: 730 --RQRRGGPLAGVATAIGIAI-LYWVSAGLFEAMGNANQLPALLAAWAPNLIFGFAAGYM 786 Query: 353 MIK 355 +++ Sbjct: 787 VLR 789 Score = 120 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 46/377 (12%), Positives = 133/377 (35%), Gaps = 26/377 (6%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YIL + + F+ ++ + + + L+ ++ L + +I +PT L Sbjct: 4 RILTRYILGEVLSHGAIGLALFTFVIFMRDLGRLLELIVRNSAPLPSVAEIFFLTLPTAL 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L+ ++ ++E+ + ++G + ++ V ++ L I ++ + Sbjct: 64 TVTLPMAVLVGILIGLSRLSADSEVTAMRSSGLGSLFFVRIVSIFSVALWILALVNNLYV 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP---NNTLQGIFIVDS 178 P+ + + L K + + ++ +F+ + + + + +G+F+ D Sbjct: 124 APRSAAALAHLQDKLKSSQASFEVQPRVFYEDFKNYVLYVEDSKSGSGSALWRGVFLADV 183 Query: 179 RDTQTHKIYYAQSGSIDLDRQAII---LNDGEVHRKSPIS-KDISIMKFKSYTLQTESAN 234 KI A+ G + + + L +G +P + F + + Sbjct: 184 STPSQPKITMAERGVVVAEGPNSLHLHLENGTQQETNPKDPTQYQVSTFDQTDIPIQLPE 243 Query: 235 SSTIV----LKANDQNLSFLLNPNPNNPNYRPELL---------ETYRSEFHKRLTQWLF 281 ++ + + + L + L Y EF +R+ Sbjct: 244 TNDKPAPELVPVAELSTQELWRLAHSGGVSAGHYLGNSIAQVKARWYAVEFQRRIALPTA 303 Query: 282 PVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL 341 ++ L+ I R+ K +++ + F ++ S I + + P + + Sbjct: 304 CLVLTLVGIPLGLS---SRRGGKSMGFVLTIILVFA-YYVVSLIGVSLGRQGKLPPAVGV 359 Query: 342 F--LFCISSIFLLMIKK 356 + ++++ + Sbjct: 360 WMANVVFLVAGIMLLHR 376 >gi|218438808|ref|YP_002377137.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 7424] gi|218171536|gb|ACK70269.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 7424] Length = 434 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 45/373 (12%), Positives = 125/373 (33%), Gaps = 22/373 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + Y+ + F++S + + + N V + LKI Y +P Sbjct: 63 SLMDRYLTSQLIPPFVLSVGIFTSMGVALANLSDLSNKVFEYDLPVIDALKILLYRVPEF 122 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 P + T ++ +EL+ + + G S P + L++++S F+ Sbjct: 123 FAYALPISVLLTTLMTYGRLSSESELIALRSCGISLWRATVPAVILSVIVSGITFVFSEG 182 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL------------YIKISKYNPNN 168 + P+ ++ K + +++F+ +++ + ++ Sbjct: 183 VVPETNYRATEILVKVLHEERNFWQNKDIFYPNYEEVKLANGQTFRQLKTLFYAEKFDGQ 242 Query: 169 TLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 ++ + I++ ++I + S + ++ +G V+ + FK Sbjct: 243 KMRSLTIINWLGDHLNEIVVSDSAQWNANQNIWDFFNGTVYLIDTDKSYKEAVPFKHQQF 302 Query: 229 QTESA--NSSTIVLKANDQNLSF-LLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIF 285 +T + NL L + + + + H+++ ++F Sbjct: 303 PLPKEAFEFATQGRNPYEMNLFQALQYKRLLEASGDNKNVRFFDVRIHQKIAFPFVCLVF 362 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL-- 343 G++ K + + + +++ I F ++ ++ P++ +L Sbjct: 363 GIMGAAIGAKPQQMSRG---TSLGLTVGIVFS-YYMLNFFTGSFGMIGLLSPMMAAWLPN 418 Query: 344 FCISSIFLLMIKK 356 I ++KK Sbjct: 419 LFGVGIGGWILKK 431 >gi|126175309|ref|YP_001051458.1| permease YjgP/YjgQ family protein [Shewanella baltica OS155] gi|217972440|ref|YP_002357191.1| permease YjgP/YjgQ family protein [Shewanella baltica OS223] gi|125998514|gb|ABN62589.1| permease YjgP/YjgQ family protein [Shewanella baltica OS155] gi|217497575|gb|ACK45768.1| permease YjgP/YjgQ family protein [Shewanella baltica OS223] Length = 370 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 61/371 (16%), Positives = 137/371 (36%), Gaps = 25/371 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R + ++ + L ++ I ++ + S ++++ + G +P ++ Sbjct: 2 IVFKYLIREVLKAQIAVLLVLLTIFISQHFVRILADASDGDFPASLIMTLIGLNLPYLVI 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + M E++++ G S + + L LA++ +F + Sbjct: 62 LVLPLSLFLGILLAHGRMYSENEMVVLHGVGVSEWYVTRVTLILAVINMLFTGYLSLYVA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI-----VD 177 P Q+ KAQ + L + F + + + + Sbjct: 122 PWAEEQQNQVLEKAQSEAGLAALVQGRFQASPNGRAVLFVERIGKDNELDKVFVAQLPDP 181 Query: 178 SRDTQTHKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 +T + A+ G + D Q + LNDG ++ SP +KD +++F Y +Q + Sbjct: 182 DDETGVTNVVVAKGGRVQEDSSGAQQLNLNDGVRYQGSPKAKDYQMIEFGGYKMQIKEQQ 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 K + + L+ +EFH RL L I LI++ A Sbjct: 242 VDERRRKLSALPVDELV----------KIEGAEAVAEFHWRLAIPLAIPIMTLIAVPLA- 290 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLL 352 + ++ K +F ++ + G F + P Y+ + ++ + + L Sbjct: 291 --RVNVRQGKFAKMFPAVLLYLGYFGLMVAGRKALQDGIIPLYLGMWWIHISALLMGLFL 348 Query: 353 MIKKK--YTKI 361 + K + +++I Sbjct: 349 LGKDRPIFSRI 359 >gi|332991780|gb|AEF01835.1| permease YjgP/YjgQ [Alteromonas sp. SN2] Length = 366 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 51/364 (14%), Positives = 121/364 (33%), Gaps = 22/364 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+L+ +S L ++ I ++ ++ + S ++L G P + Sbjct: 2 LIFRYLLKETLKSQLAIFFILMAIFVTLRFVRVLGDASDGDIPAGLVLGFLGLYAPILAS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + + ++E+ ++ G S + + +LFL++L+ I Sbjct: 62 LVLPISAYLGIMLAHGRLYVDSEMTVMRACGISEWYITRVMLFLSVLIMIVTGAITLYFA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD----LYIKISKYNPNNTLQGIFIVDS 178 P QL KA+ S + F + + I + + Sbjct: 122 PMAAENEYQLREKARNEAGLSAIIPGRFQQTGNAKAVIFVHDIDTDDQLRRVFLSQNKTE 181 Query: 179 RDTQTHKIYYAQSGSIDLDRQAI---ILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 ++ YAQ+G + + +L G + K ++F Y +Q + Sbjct: 182 NGENQVQVVYAQTGQVASNPDGTRNLVLKQGVQYEGQQSQKSYRKVEFDEYQIQIADKPA 241 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 K + + L + R+E R+ L LI++ Sbjct: 242 EEARRKVSVLPTTELW----------GDESIEARAELQWRIAIPLSLPFLILIAVPL--- 288 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLM 353 A+ ++ + +F ++ + G F + + P + + ++ + L+ Sbjct: 289 SAVDPRQGRFGKMFPAILLYLGYFLLLLASRRVLEDGKIPPQLGLWWVHTIMLIIGVALI 348 Query: 354 IKKK 357 ++ + Sbjct: 349 VRDR 352 >gi|239993539|ref|ZP_04714063.1| predicted permease [Alteromonas macleodii ATCC 27126] Length = 353 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 41/354 (11%), Positives = 126/354 (35%), Gaps = 3/354 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +LYI R + + ++ ++ ++ +I+ ++++ + + + + L Sbjct: 3 KILDLYIARTLLGTITVTLSVLIGLSALIKFVEQLRKIGEGDYDMLVAFIYVLLSLARDL 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + + + N+EL+++ G SR +I + +++ + + + Sbjct: 63 EQFFPMATLLGGLIGMGVLASNSELVVMQAAGMSRWNIINSAMKSTLVMILLVMAVGEWV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + KQ+ +A + ++ ++ + D + ++ + D Sbjct: 123 TPYSETKAKQIRTEAISGGSLFSSDKLVWAKDGDRFVSIGQVLSQDSLKDVSIFSFNPDL 182 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 I +A++G+ D L+D EV + + + + + + +K Sbjct: 183 SLESITHAKNGAF--DGDGWWLSDVEVTKFTETNVTVDENNRMRWNSTLTPDKLGIVAVK 240 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 +++ LL+ N + Y+ +++ Q + + L+++ Sbjct: 241 PEALSITGLLD-YVNYLENNDQDPSRYQLALWRKVFQPISVGVMLLMALSFIFGPLRSVT 299 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + F + + + Q P ++ L L + +++ + Sbjct: 300 MGARVIMGVLTGFGFFILNEVFGPVSLVYQLPPFLGALLPSLLFAAIAGVMLRR 353 >gi|116747638|ref|YP_844325.1| permease YjgP/YjgQ family protein [Syntrophobacter fumaroxidans MPOB] gi|116696702|gb|ABK15890.1| permease YjgP/YjgQ family protein [Syntrophobacter fumaroxidans MPOB] Length = 360 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 43/355 (12%), Positives = 109/355 (30%), Gaps = 2/355 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ Y+LR F+++ + ++ + + + P+V Sbjct: 1 MRIIPRYVLRHFLPVFMLALFTFTSLYLIVDFFENMEQFIEKRVPAADTIAYFLNKTPSV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 P + L + RN EL+ ++ G +T + P++ A ++ + Sbjct: 61 AAQGIPMAALLGALITLGLLKRNRELIALEAAGVKTVTYVTPIVAAAFFIAAVHLVLGET 120 Query: 121 IEPKCRS-TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + + K + + Q + ++ ++ Y+ + Sbjct: 121 VSRSMNQVSTKIWNEQVQRRKGHFSWGVENVWYHGQNVIYQVRFYDKRTQTLEKVSLFFL 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 D + + D G + S + +++TLQ A+ S + Sbjct: 181 DPSFRLVQRLDARRFRWDGARWQAEQGLFLKFSESGTEQETFDQRAFTLQETPADFSGLE 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + + L Y E H R+ L ++ ++ I+ A ++++ Sbjct: 241 TIPEELDWLDLYR-YAEKIRQEGYNSLPYIIELHLRVAFPLSAIVLAILGIIIALRQSMH 299 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 I + + S+ V + P + + + +++ L I Sbjct: 300 GGIALGVGIGLLVGSSYFVVQQLGCALAGAGALPPVVGVWAANVIFLAAAVYLWI 354 >gi|42523904|ref|NP_969284.1| YjgP/YjgQ permease [Bdellovibrio bacteriovorus HD100] gi|39576111|emb|CAE80277.1| predicted permease YjgP/YjgQ family [Bdellovibrio bacteriovorus HD100] Length = 367 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 63/369 (17%), Positives = 140/369 (37%), Gaps = 14/369 (3%) Query: 1 MKSFE-----LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGY 55 M F YI + SF++ L V I + Q+L+ ++ + +I GY Sbjct: 1 MSIFNGKKAAQYIFFEMLPSFILGLLVFVSIILMFQVLRLTEFALVHGVAMKTIAEIIGY 60 Query: 56 LIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLF 115 +I ++LP++ P +++++E++ + +G TL+ P L LA L+ + Sbjct: 61 VIISMLPILFPMALLFSVLLTYGRLSQDSEIVAMKASGLPMGTLLLPALILATLVGVISA 120 Query: 116 ISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIF 174 I P + L ++ + ++E F D+ I ++ N + L+ +F Sbjct: 121 QMSFNIAPWGNRQFEVLYSRLANTKAAAIIKEGTFAEGFFDMVIYANEVNTDKGLLKKVF 180 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQ---AIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 I D ++ A++G I D IL +K + + F +Y ++ Sbjct: 181 IYDEKNGDVPLTIIAKAGEIVPDPTRPGHEILLQLNQGEIHRQAKTHTKISFDTYDVRFS 240 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 + K+ + E+ T +SE+HKR + ++F +I + Sbjct: 241 EPQNIEEKAKSPPSLTLEEVRNRLKEDIKDKEVRRTLQSEYHKRWAISVLCIVFAMIGV- 299 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF--LFCISSI 349 R+ K + + + I +W ++ L ++ +++ Sbjct: 300 -GLGTTTNRRAAKAGGMILCIGIIIF-YWILYVAAEGAARSGALPAALAIWTPNVLFAAL 357 Query: 350 FLLMIKKKY 358 + +++ + Sbjct: 358 GVETLRRNW 366 >gi|319896845|ref|YP_004135040.1| inner membrane protein [Haemophilus influenzae F3031] gi|317432349|emb|CBY80704.1| conserved inner membrane protein [Haemophilus influenzae F3031] Length = 358 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 47/357 (13%), Positives = 117/357 (32%), Gaps = 1/357 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + + YI + I + + L +V ++ +I+ +++ V T + + +G IP Sbjct: 2 MNTLDRYIGKSILGAIFATLLTLVGLSAIIKFVEQFRSVGKGTYDIWQAVAFTGLTIPKD 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ +EL+++ + G SR + V+ A L + + Sbjct: 62 IETFFPMAALLGALIALGNLASRSELVVMQSAGFSRFKIGIAVMKTASPLVLLTMMIGEW 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + + AKA + ++ ++ + + + Sbjct: 122 GIPQTEQFARDMRAKALSGGSILSIKNGVWAKDGHHFVFVRRVTDDTKLDDIYIYTFEQQ 181 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 K+ +A S D L + + +++ + L Sbjct: 182 HNLIKLKHANQASYSEDEAKWTLRQVNHSTITKDEIITTNHLSETWETSLTPDKLGAVSL 241 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + ++S L + + + + + F +++ Q + + L+++ Sbjct: 242 RPTSLSISGLYH-YISFLRETGQDVSRFELTFWRKIFQPVSVGVMMLLALSFIFGSLRSV 300 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I + F V + P L L I I+ L+ +K+ Sbjct: 301 TAGARIVTGICVGFLFYVVNEILGQTSVVYGIPAIFGALIPSLLFIVMIWWLLSRKR 357 >gi|269797613|ref|YP_003311513.1| permease YjgP/YjgQ family protein [Veillonella parvula DSM 2008] gi|269094242|gb|ACZ24233.1| permease YjgP/YjgQ family protein [Veillonella parvula DSM 2008] Length = 363 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 48/368 (13%), Positives = 122/368 (33%), Gaps = 13/368 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPT 59 M+ + YIL+ FL I + + ++ L ++++ +P+ Sbjct: 1 MRLLDKYILKAFVGPFLFGVFAFTSIFIGTGTLFRIAQYITEYGAPLLLVMQAFVLALPS 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ + P + + + ++ +E++++ G S + L PV +A+++SI Sbjct: 61 IVILTFPMSVLLASLMTFSRLSSTSEIVVMRAGGLSFLRLAMPVYIIALIISIGAVAFNE 120 Query: 120 IIEPKCRSTIK----QLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI 175 + P+ + + K T +++ + + Y+ + Sbjct: 121 FVVPRTNHMYQTIVREQIMKNASPQTQNHIVLKTMNGDELGTLMYAKSYDAETKQLSMIT 180 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE--SA 233 V + + + Q ++ +G ++ S + MKFK +L + Sbjct: 181 VQQFGEGGKLQQVENADTAIWNGQYWVMQNGIIYDLSAGNGVERTMKFKEQSLPIKSAPK 240 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + K + + L + E ++R T L +F L+ Sbjct: 241 DIQQDQRKPEELTIKELRHQIRAYKAAYT-NANKLEMEMYQRFTIPLASFVFALVGAPLG 299 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF-CISSIFLL 352 +QR F + +++G + + +L + + I L Sbjct: 300 L----QKQRSSSSIGFGISILIIFIYYGVMTFAGALGKGGALPTLLAALIPDTLGIIAGL 355 Query: 353 MIKKKYTK 360 + + +K Sbjct: 356 YLNWRVSK 363 >gi|304410148|ref|ZP_07391767.1| permease YjgP/YjgQ family protein [Shewanella baltica OS183] gi|307302141|ref|ZP_07581899.1| permease YjgP/YjgQ family protein [Shewanella baltica BA175] gi|304351557|gb|EFM15956.1| permease YjgP/YjgQ family protein [Shewanella baltica OS183] gi|306914179|gb|EFN44600.1| permease YjgP/YjgQ family protein [Shewanella baltica BA175] Length = 370 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 62/371 (16%), Positives = 137/371 (36%), Gaps = 25/371 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R + ++ + L ++ I ++ + S ++++ + G +P ++ Sbjct: 2 IVFKYLIREVLKAQIAVLLVLLTIFISQHFVRILADASDGDFPASLIMTLIGLNLPYLVI 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + M E++I+ G S + + L LA++ +F + Sbjct: 62 LVLPLSLFLGILLAHGRMYSENEMVILHGVGVSEWYVTRVTLILAVINMLFTGYLSLYVA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI-----VD 177 P Q+ KAQ + L + F + + + + Sbjct: 122 PWAEEQQNQVLEKAQSEAGLAALVQGRFQASPNGRAVLFVERIGKDNELDKVFVAQLPDP 181 Query: 178 SRDTQTHKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 +T + A+ G + D Q + LNDG ++ SP +KD +++F Y +Q + Sbjct: 182 DDETGVTNVVVAKGGRVQEDSSGAQQLNLNDGVRYQGSPKAKDYQMIEFGGYKMQIKEQQ 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 K + + L+ +EFH RL L I LI++ A Sbjct: 242 VDERRRKLSALPVDELV----------KIEGAEAVAEFHWRLAIPLAIPIMTLIAVPLA- 290 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLL 352 + ++ K +F ++ + G F + P Y+ + ++ + + L Sbjct: 291 --RVNVRQGKFAKMFPAVLLYLGYFGLMVAGRKALQDGIIPLYLGMWWIHISALLMGLFL 348 Query: 353 MIKKK--YTKI 361 + K + +++I Sbjct: 349 LGKDRPIFSRI 359 >gi|218440672|ref|YP_002379001.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 7424] gi|218173400|gb|ACK72133.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 7424] Length = 388 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 57/365 (15%), Positives = 133/365 (36%), Gaps = 20/365 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + Y+ + FL + + + + V+ S SL + L+I +P Sbjct: 17 SIVDRYLFMELLIPFLFGMGLFTSLGIAIGTLFDLVRKVTESGLSLTVALQILSLKMPEF 76 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + T + + ++EL+ + + G S L+ P + L+++++ F + Sbjct: 77 IVLAFPMSILLATLMAYSRLASDSELIALRSIGLSPYRLLVPSIILSLMVTGVTFFFSDY 136 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI------------KISKYNPNN 168 + P+ KQ+ A A +++E+N+ + + + ++ Sbjct: 137 VAPQATQQAKQILADALKKDQPAFVEDNIIYPEYRKITLENGRDQTVLTRLFYAEKFDGQ 196 Query: 169 TLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 +QG+ I+D ++I +QS +LD + +G ++ +P +I++F+ L Sbjct: 197 QMQGLTILDRSQPGVNQIVTSQSAMWNLDSNSWDFYNGTIYLIAPDGSYRNIVRFQHQKL 256 Query: 229 QTESANSSTIVLK--ANDQNLSFLLNPNPNNPNYRPEL-LETYRSEFHKRLTQWLFPVIF 285 A K + +++ + E ++ ++F Sbjct: 257 DLPRAPLDIAKGKQNPAEMSIAEAKEYLRIVKLSKNEPRARKVEVRIQEKYALPFVCIVF 316 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC 345 GLI K K I + + F ++ S+I + P++ +L Sbjct: 317 GLIGSAIGLKPQNN---NKATSFGICIILIFS-YYLLSFIASSMGIWGIISPVVSAWLPN 372 Query: 346 ISSIF 350 I Sbjct: 373 TLGII 377 >gi|260886292|ref|ZP_05897555.1| membrane protein, YjgP/YjgQ family [Selenomonas sputigena ATCC 35185] gi|330839725|ref|YP_004414305.1| permease YjgP/YjgQ family protein [Selenomonas sputigena ATCC 35185] gi|260864011|gb|EEX78511.1| membrane protein, YjgP/YjgQ family [Selenomonas sputigena ATCC 35185] gi|329747489|gb|AEC00846.1| permease YjgP/YjgQ family protein [Selenomonas sputigena ATCC 35185] Length = 363 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 40/355 (11%), Positives = 120/355 (33%), Gaps = 10/355 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + YI R + +F + + + ++ S ++K+ + +P + Sbjct: 4 RLLDKYIFREVCLAFFFGICGTSAVFVGSGTLFRIAQYITEYGASFGSVVKMFIFSLPAI 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 P + ++ ++E+ + + G S + PV+ L +++SIF + Sbjct: 64 AIYTFPMSMLLAALLTFGRLSSSSEITAMKSCGVSFYRIAAPVIVLGVVVSIFSILFTEH 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI---KISKYNPNNTLQGIFIVD 177 I P+ + + + A ++++ + D + ++ T + Sbjct: 124 IVPRANNAYENVIAYEIQGNAAPKSQDHIVIKEIKDGEMQRLMYARRYDAATETLEGVTL 183 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 Q Y + + + G ++ S + ++ +F L + Sbjct: 184 QSFEQGETKYVQDAAYAKWEGTQWTMYRGAIYEVSGGKSEHTM-RFDKQVLPINAGPGRI 242 Query: 238 IV-LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + K ++ L + + +E ++R+T + ++F +I + + Sbjct: 243 VREQKKPEELTMKELRQQIELMRTQFVDTKKLETELYQRITIPMASLVFAIIGVPLGIQP 302 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + I + F ++ + + Q+ P ++L ++ + + Sbjct: 303 TRSSSSRGIGLS----LLIFFCYYVLMTLAGALGQSGALNPAYAVWLPNVAGLLI 353 >gi|254418640|ref|ZP_05032364.1| putative permease, YjgP/YjgQ family [Brevundimonas sp. BAL3] gi|196184817|gb|EDX79793.1| putative permease, YjgP/YjgQ family [Brevundimonas sp. BAL3] Length = 397 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 64/360 (17%), Positives = 136/360 (37%), Gaps = 7/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+ R I + +C + I + Q L ++ ++ +S+ +++K++ +P + Sbjct: 20 MTLIQRYLFRQISLPVVAACASLAGIGILSQSLDQLEVIVERGQSVWVMVKLTLLALPQL 79 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + LT M R EL G +R +I P LA L+ I + Sbjct: 80 LAVILPIGLFVGALIALTRMQREQELTAAFAGGMTRWQVISPAARLAFLVLILNLVMTLF 139 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +P + + + + L +EE F + D L + + + N L+ +F+ Sbjct: 140 AQPWAQREARNQAFAIRTDLAALLVEEGQFVQGPDGLTVYVQQIEQNGLLKNLFVYLDDG 199 Query: 181 TQTHKIYYAQS--GSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN--SS 236 T A++ G + + + DG + S + + F Y + + Sbjct: 200 KSTQNWSAAEARFGRDAANEPVLTMIDGSWQKYS-SRGVLETLSFDRYDFPLGQFSGVTE 258 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 I K D L LL P+P +E H R+ L+ ++ +++ A Sbjct: 259 QIRYKPADLYLRQLLTPSPRVLETAG-SRGELLAEAHARIAAPLYALVAMAMALAAIMGG 317 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + R + + + V ++ NP+ + YL + + + ++ + Sbjct: 318 SFSRTGYSLRIAKAA-GVFLLVRVIGYGLVAASAWNPWMNILQYLAPLIVVAAAVRLLFR 376 >gi|160876367|ref|YP_001555683.1| permease YjgP/YjgQ family protein [Shewanella baltica OS195] gi|160861889|gb|ABX50423.1| permease YjgP/YjgQ family protein [Shewanella baltica OS195] gi|315268557|gb|ADT95410.1| permease YjgP/YjgQ family protein [Shewanella baltica OS678] Length = 370 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 62/371 (16%), Positives = 137/371 (36%), Gaps = 25/371 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R + ++ + L ++ I ++ + S ++++ + G +P ++ Sbjct: 2 IVFKYLIREVLKAQIAVLLVLLTIFISQHFVRILADASDGDFPASLIMTLIGLNLPYLVI 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + M E++I+ G S + + L LA++ +F + Sbjct: 62 LVLPLSLFLGILLAHGRMYSENEMVILHGVGVSEWYVTRVTLILAVINMLFTGYLSLYVA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI-----VD 177 P Q+ KAQ + L + F + + + + Sbjct: 122 PWAEEQQNQVLEKAQSEAGLAALVQGRFQASPNGRAVLFVERIGKDNELDKVFVAQLPDP 181 Query: 178 SRDTQTHKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 +T + A+ G + D Q + LNDG ++ SP +KD +++F Y +Q + Sbjct: 182 DDETGVTNVVVAKGGRVQEDSSGAQQLNLNDGVRYQGSPKAKDYQMIEFGGYKMQIKEQQ 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 K + + L+ +EFH RL L I LI++ A Sbjct: 242 VDERRRKLSALPVDELV----------KVEGAEAVAEFHWRLAIPLAIPIMTLIAVPLA- 290 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLL 352 + ++ K +F ++ + G F + P Y+ + ++ + + L Sbjct: 291 --RVNVRQGKFAKMFPAVLLYLGYFGLMVAGRKALQDGIIPLYLGMWWIHISALLMGLFL 348 Query: 353 MIKKK--YTKI 361 + K + +++I Sbjct: 349 LGKDRPIFSRI 359 >gi|166367866|ref|YP_001660139.1| hypothetical protein MAE_51250 [Microcystis aeruginosa NIES-843] gi|166090239|dbj|BAG04947.1| hypothetical protein MAE_51250 [Microcystis aeruginosa NIES-843] Length = 389 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 42/365 (11%), Positives = 123/365 (33%), Gaps = 21/365 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + YI + FL + + + + ++ S + LKI +P Sbjct: 17 SILDRYIFVELLLPFLFGMGLFTSLGVAIGTLFDLVRRITESGLPFTLALKILLLKMPEF 76 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + + + ++EL+ + + G S LI P + L+++++ ++ + Sbjct: 77 IVLAFPMSILLAALMAYSRLASDSELIALKSIGISVYRLIIPAIVLSLIVTGLTYVFNDY 136 Query: 121 IEPKCRSTIKQLS-------------AKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN 167 + P + + + ++ Sbjct: 137 VAPAASYEANATMTKALRPNRKSFIEDNIIYPEYGKVRQPDGGEPQTVLRRLFYAERFNG 196 Query: 168 NTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 + G+ I+D + ++I ++S S ++++ +G ++ P +I++F+ Sbjct: 197 QEMLGLTILDRTQPEVNQIITSESASWNIEKNIWDFYNGTIYLIDPKGSYRNIVRFQHQQ 256 Query: 228 LQT--ESANSSTIVLKANDQNLSFLLNP-NPNNPNYRPELLETYRSEFHKRLTQWLFPVI 284 L + + ++ L + P + + + ++++ ++ Sbjct: 257 LALPRTPLDLAFRARDGSEMTLRQAREYLEILQLSGNPTKIRKLQVQIEQKISLPFVCLV 316 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 FG+I + K I + + F ++ S++ + P++ +L Sbjct: 317 FGMIGAALGLRPQNS---NKATSFGICIVLIFS-YYLLSFVTSSLGIGGVLTPLMAAWLP 372 Query: 345 CISSI 349 I + Sbjct: 373 NILGL 377 >gi|238019692|ref|ZP_04600118.1| hypothetical protein VEIDISOL_01566 [Veillonella dispar ATCC 17748] gi|237863733|gb|EEP65023.1| hypothetical protein VEIDISOL_01566 [Veillonella dispar ATCC 17748] Length = 363 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 50/368 (13%), Positives = 121/368 (32%), Gaps = 13/368 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPT 59 M+ + YIL+ FL I + + ++ L +++K +P+ Sbjct: 1 MRLLDKYILKAFVGPFLFGVFAFTSIFIGTGTLFRIAQYITEYGAPLLLVMKAFVLALPS 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ + P + + + ++ +E++++ G S + L PV +A+++SI Sbjct: 61 IVILTFPMSVLLASLMTFSRLSSTSEIVVMRAGGLSFLRLAMPVYIIALIISIGAVAFNE 120 Query: 120 IIEPKCRSTIK----QLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI 175 + P+ + + + K T +++ D + YN + Sbjct: 121 FVVPRTNNMYQTIVREQIMKNASPQTQNHIVLKTMNGNDLGTLMYAKSYNAETKKLSMIT 180 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE--SA 233 V + + + Q ++ +G ++ S MKFK +L + Sbjct: 181 VQQFGEGGKLQQVENADTAVWNGQYWVMQNGIIYDISAGDGVERTMKFKEQSLPIKSAPK 240 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + K + + L + E ++R T L +F L+ Sbjct: 241 DIQQDQRKPEELTIKELRHQIKAYKAAYT-NANKLEMEMYQRFTIPLASFVFALVGAPLG 299 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF-CISSIFLL 352 +QR F + +++G + + + + + I L Sbjct: 300 L----QKQRSSSSIGFGISILIIFIYYGVMTFAGALGKGGALPTVFAALIPDTLGIIAGL 355 Query: 353 MIKKKYTK 360 + + +K Sbjct: 356 YLNWRVSK 363 >gi|294793349|ref|ZP_06758494.1| membrane protein, YjgP/YjgQ family [Veillonella sp. 6_1_27] gi|294455780|gb|EFG24145.1| membrane protein, YjgP/YjgQ family [Veillonella sp. 6_1_27] Length = 363 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 48/368 (13%), Positives = 122/368 (33%), Gaps = 13/368 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPT 59 M+ + YIL+ FL I + + ++ L ++++ +P+ Sbjct: 1 MRLLDKYILKAFVGPFLFGVFAFTSIFIGTGTLFRIAQYITEYGAPLLLVMQAFVLALPS 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ + P + + + ++ +E++++ G S + L PV +A+++SI Sbjct: 61 IVILTFPMSVLLASLMTFSRLSSTSEIVVMRAGGLSFLRLAMPVYIIALIISIGAVAFNE 120 Query: 120 IIEPKCRSTIK----QLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI 175 + P+ + + K T +++ + + Y+ + Sbjct: 121 FVVPRTNHMYQTIVREQIMKNASPQTQNHIVLKTMNGDELGTLLYAKSYDAETKQLSMIT 180 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE--SA 233 V + + + Q ++ +G ++ S + MKFK +L + Sbjct: 181 VQQFGEGGKLQQVENADTAIWNGQYWVMQNGIIYDLSAGNGVERTMKFKEQSLPIKSAPK 240 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + K + + L + E ++R T L +F L+ Sbjct: 241 DIQQDQRKPEELTIKELRHQIRAYKAAYT-NANKLEMEMYQRFTIPLASFVFALVGAPLG 299 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF-CISSIFLL 352 +QR F + +++G + + +L + + I L Sbjct: 300 L----QKQRSSSSIGFGISILIIFIYYGVMTFAGALGKGGALPTVLAALIPDTLGIIAGL 355 Query: 353 MIKKKYTK 360 + + +K Sbjct: 356 YLNWRVSK 363 >gi|282850060|ref|ZP_06259442.1| YjgP/YjgQ family [Veillonella parvula ATCC 17745] gi|282580249|gb|EFB85650.1| YjgP/YjgQ family [Veillonella parvula ATCC 17745] Length = 363 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 49/368 (13%), Positives = 122/368 (33%), Gaps = 13/368 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPT 59 M+ + YIL+ FL I + + ++ L ++++ +P+ Sbjct: 1 MRLLDKYILKAFVGPFLFGVFAFTSIFIGTGTLFRIAQYITEYGAPLLLVMQAFVLALPS 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ + P + + + ++ +E++++ G S + L PV +A+++SI Sbjct: 61 IVILTFPMSVLLASLMTFSRLSSTSEIVVMRAGGLSFLRLAMPVYIIALIISIGAVAFNE 120 Query: 120 IIEPKCRSTIK----QLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI 175 + P+ + + K T +++ + + YN + Sbjct: 121 FVVPRTNHMYQTIVREQIMKNASPQTQNHIVLKTMNGDELGTLMYAKSYNAETKQLSMIT 180 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE--SA 233 V + + + Q ++ +G ++ S + MKFK +L + Sbjct: 181 VQQFGEGGKLQQVENADTAIWNGQYWVMQNGIIYDLSAGNGVERTMKFKEQSLPIKSAPK 240 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + K + + L + E ++R T L +F L+ Sbjct: 241 DIQQDQRKPEELTIKELRHQIRAYKAAYT-NANKLEMEMYQRFTIPLASFVFALVGAPLG 299 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF-CISSIFLL 352 +QR F + +++G + + +L + + I L Sbjct: 300 L----QKQRSSSSIGFGISILIIFIYYGVMTFAGALGKGGALPTVLAALIPDTLGIIAGL 355 Query: 353 MIKKKYTK 360 + + +K Sbjct: 356 YLNWRVSK 363 >gi|77361338|ref|YP_340913.1| hypothetical protein PSHAa2422 [Pseudoalteromonas haloplanktis TAC125] gi|76876249|emb|CAI87471.1| putative membrane protein [Pseudoalteromonas haloplanktis TAC125] Length = 370 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 48/365 (13%), Positives = 131/365 (35%), Gaps = 23/365 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + +S + L ++ I +++ + S + ++L + +P + Sbjct: 2 LIFRYLTAEVLKSQVAVFLTLMTIFLSQKLVSILGDASEGSIPAKLVLSMIALKLPQLAS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + + ++E+ ++ G S +++ L ++ L+I + Sbjct: 62 LILPLSIFLGIILAYSRIYADSEMTVLKACGVSEWYVVRVTLISSVGLAILAAALTMHVA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P QL +A+ S L F + ++ + N + + ++ Sbjct: 122 PWASEQEYQLKEQAKADAGLSALRAGRFQQTGNEKAVVFIHNIENGGKELNKVFVAQLPD 181 Query: 183 THKIYYAQ--------SGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + K A+ Q ++L+DG+ + ++ +++ +F Y++Q Sbjct: 182 SEKDNLARLVYAEQGVVIEAQNGEQQLVLSDGKRYETDGLTPALNLTEFDGYSVQIREQE 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 K + LL +++ R+ L + L+++ Sbjct: 242 IEHQRRKLEAIPTNQLLAL----------NTPEATAQWQWRIAIPLSIPLLTLLAVPL-- 289 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLL 352 + ++ K + ++S+ G F + + + P I + ++ L + LL Sbjct: 290 -SVVNPRQGKFAKLVPAISLYLGYFILLNAAKFAVEDGKIPPSIGLWWIHLSALFIGGLL 348 Query: 353 MIKKK 357 +IK + Sbjct: 349 IIKGR 353 >gi|78188283|ref|YP_378621.1| hypothetical protein Cag_0302 [Chlorobium chlorochromatii CaD3] gi|78170482|gb|ABB27578.1| conserved hypothetical protein [Chlorobium chlorochromatii CaD3] Length = 359 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 63/360 (17%), Positives = 121/360 (33%), Gaps = 5/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI + ++FL + L V + +I +++++ S + + IP++ Sbjct: 1 MKILERYIFQQFIKAFLFTALVFVSLFIIINMIEKLGNFMDHHVSALEIARYYLLSIPSI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +P + + V + EL I + G S L+ P + A+LL +F F + Sbjct: 61 FLVTSPVSALLASILVAGKLATQNELPAIRSAGVSMRQLLTPFAWGALLLFLFNFFNAGW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF-IVDSR 179 + P S + NL + +I I +NP N I Sbjct: 121 LAPTTYSHNRTFEQLYLGKNAGDQETRNLHLLDSGNRFISIGAFNPINESLNNVSIERLS 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 A S + + + S + + + L + Sbjct: 181 GATMISRIDADSMHYNRRTKRWTMWRVTERYFSNGYQSFTTKPTATIRLALRPKALHEMR 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L+ ++ L LE +FH ++ +I LI + A A Sbjct: 241 LQPDEITLPRHYQFLREKEEAGFSGLERSAVKFHNKIAMPFASLIITLIGVPLA---ARK 297 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYT 359 ++ I I+L I F ++ G I PI+ +L + + + + K + Sbjct: 298 KRGGIAAEIAITLFIGF-LYLGIQRTIAIAGYQGVLPPIVAAWLPNLLFLVVGWVLYKKS 356 >gi|302392908|ref|YP_003828728.1| permease [Acetohalobium arabaticum DSM 5501] gi|302204985|gb|ADL13663.1| permease YjgP/YjgQ family protein [Acetohalobium arabaticum DSM 5501] Length = 364 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 55/366 (15%), Positives = 123/366 (33%), Gaps = 15/366 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQ-ILQRINLVSSSTESLNILLKISGYLIPT 59 MK + Y+L + L I + + +L+ S ++ +P Sbjct: 1 MKIIDRYLLTELLSPLLFGIFAFTSIFVGTDILFELADLMIEWGVSAVTAGQLFILSLPE 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 V+ + P + T ++ ++E++ + G S I LI PVL +A+LLS ++ Sbjct: 61 VIVLTFPMSMLLATLLSFGRLSGDSEVVALKAGGVSFIRLIIPVLIVALLLSGLTILANE 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTL-----QGIF 174 I P+ + +++ + ++NL D KI Sbjct: 121 TIVPQSKDAYRRIVWNIKHQEKMPTTQKNLRIAPLDKKTGKIDYIFYAYHFDGSDLTMEE 180 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIM--KFKSYTLQTES 232 + + ++ + DG ++ + K ++ + L E Sbjct: 181 VSLQDYQNGKLVQVIEAKRARWTDERWQFIDGTIYNVNSKDKVPTMEFETYTVKKLNREP 240 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 S ++ ++ L N + N + + + + +++R IF LI Sbjct: 241 KEISRAQKDPDEMSIEEL-NRHINLKEEEGKDVASLKVLYYQRYAIPFSCFIFALIGAPL 299 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--FCISSIF 350 + + + +S+ I F +++ I + Q P + +L + Sbjct: 300 GLQPN---RSGASIGLGLSIVIIF-IYYTLMTIGSTLGQTGTLPPAVGAWLQNIIFGLVG 355 Query: 351 LLMIKK 356 +I K Sbjct: 356 TGLIIK 361 >gi|159028498|emb|CAO87305.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 389 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 42/365 (11%), Positives = 120/365 (32%), Gaps = 21/365 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + YI + FL + + + + ++ S + LKI +P Sbjct: 17 TILDRYIFVELLLPFLFGMGLFTSLGVAIGTLFDLVRRITESGLPFTLALKILLLKMPEF 76 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + + + ++EL+ + G S LI P + L+++++ +I + Sbjct: 77 IVLAFPMSILLAALMAYSRLASDSELIAFKSIGISVYRLIIPAIVLSLIVTGLTYIFNDY 136 Query: 121 IEPKCRSTIKQLS-------------AKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN 167 + P + + ++ Sbjct: 137 VAPAASYEANATMTKALRPNRKSFIEDNIIYPEYGKVRPPDGGEAQTVLRRLFYAERFNG 196 Query: 168 NTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 + G+ I+D + ++I +++ S ++++ +G ++ P +I++F+ Sbjct: 197 QEMLGLTILDRTQPEVNQIITSETASWNIEKNIWDFYNGTIYLIDPNGSYRNIVRFQHQQ 256 Query: 228 LQT--ESANSSTIVLKANDQNLSFLLNP-NPNNPNYRPELLETYRSEFHKRLTQWLFPVI 284 L + + ++ L + P + + ++++ ++ Sbjct: 257 LALPRTPLDLAFRGRDGSEMTLRQAREYLEILQLSGNPTKTRKLQVQIEQKISLPFVCLV 316 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 FG+I + K I + + F ++ S++ + P++ +L Sbjct: 317 FGMIGAALGLRPQNS---NKATSFGICIVLIFS-YYLLSFVTSSLGIGGVLTPLMAAWLP 372 Query: 345 CISSI 349 I + Sbjct: 373 NILGL 377 >gi|326405101|ref|YP_004285183.1| permease YjgP/YjgQ family protein [Acidiphilium multivorum AIU301] gi|325051963|dbj|BAJ82301.1| permease YjgP/YjgQ family protein [Acidiphilium multivorum AIU301] Length = 374 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 55/352 (15%), Positives = 138/352 (39%), Gaps = 7/352 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y+ R + +S L +V + W+ Q L+ I L+ S + L ++G L+P+ + Sbjct: 8 TRLDRYVFRQLLIGLAVSTLGLVALVWLTQSLRFIQLIIQHGLSPVVFLHLTGLLVPSFV 67 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 ++ P + V + + EL ++ +G S + +P L LA+L + + + Sbjct: 68 AVILPITCFIVILFVYARLAADRELTVMRASGMSDAAIARPALALAMLTMLACWGLNVWL 127 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + + + LE +F + + + + + + + L GI I D+R Sbjct: 128 VPSTLARFTHFESIIRNQVAAFLLEPGVFTPIPGHITVYVQRRDHDQVLHGIVIQDARQK 187 Query: 182 QTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 A+SG + D ++L DG + P + ++I+ F+ + T Sbjct: 188 GEPATILARSGRLIDGPDGPEVLLLDGSREQVDPKTGRLNILSFRRNLISLAKPTGVTRK 247 Query: 240 --LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 K ++ ++ L + + + + + + + +I++++ + Sbjct: 248 LAPKTSEATMTQLFHAGAAHVPPPVQRRWREEAWRR--IASPFAVLSYAVIALLSVLRSP 305 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 R++ + ++ I G+ + + IP+++ + + Sbjct: 306 F-RRQGGAAALVAAVFIVMGLVALELGTENLAARQNGLIPLIFAVTLGPALV 356 >gi|300114326|ref|YP_003760901.1| permease YjgP/YjgQ family protein [Nitrosococcus watsonii C-113] gi|299540263|gb|ADJ28580.1| permease YjgP/YjgQ family protein [Nitrosococcus watsonii C-113] Length = 354 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 40/355 (11%), Positives = 106/355 (29%), Gaps = 3/355 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI + + L+ ++ + +Q + + V + L+ + Y IP Sbjct: 1 MKILDRYIAKAVISYTLLVLFILIALYTFLQFITELEDVGEGNYGVMGALRYTTYSIPQH 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + + L + +EL+ + G S + L ++ I + + Sbjct: 61 IYDLLPVAALLGSVLGLGYLAGQSELVAMRAAGFSVGRITLSALATGMIFVIATVLMGEV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + +L + A+ E+ + R ++ Sbjct: 121 VAPPAQQAANKLRSLAKTGHLSEDGEQGFWSRNGNNFNHVGRVLPNGQYEYIEIFEFDNQ 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + A D L D S ++ + +++ Sbjct: 181 RRLRIVTQATRAIYHKDG--WHLYDVTQRLISTEGIITRRLEEALWESGLSPEMLDVVMV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + L + E Y+ F ++ +I ++I Sbjct: 239 DPQQLSAWGLYR-YIGYLQQSKQAAEQYQQAFWSKIVAPFSTLIMMFLAIPFIFGPLRSV 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + + I F +F + + ++ + L C++ +++ + Sbjct: 298 SVGQRILVGALVGIGFFLFNRLFNQLGLVFDFSPWLGAAFPSLLCLALGVVMLRR 352 >gi|77361337|ref|YP_340912.1| hypothetical protein PSHAa2421 [Pseudoalteromonas haloplanktis TAC125] gi|76876248|emb|CAI87470.1| putative membrane protein [Pseudoalteromonas haloplanktis TAC125] Length = 355 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 54/356 (15%), Positives = 132/356 (37%), Gaps = 3/356 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ + Y+ R I ++ + L +V I+ +I+ + ++ V + L + + Y IP Sbjct: 2 MKTLDWYLGRSILQTTGFALLVLVGISTLIKFIDQLKSVGRGSYDLMTAMLYTLYTIPGD 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L ++ N+EL+++ G SR+ +I V+ A+ +++ + Sbjct: 62 LVVFFPMAALIGGLTGLGALASNSELVVMHAAGMSRLQIISSVMKTAVFMALCMMALGEW 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + K++ +A + + + + D + +I I + N L G+ + Sbjct: 122 GVPEAQLQAKEMRNQA-IHGGDVFNAQKGVWAKDGNNFINIEDVDQNGKLNGVHMYHFDQ 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + ++ + +L + S + + Y Q + + + Sbjct: 181 SLSLTQITKAKDALSREN-GWLLRGVNKVKISDELITTEQVPEEFYPSQLTAEKLGVVSV 239 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K + + L + + TY ++L Q + + L+++ Sbjct: 240 KPESLSFTGL-WSYLDYLKQNDQDTSTYELALWRKLMQPISIAVMLLVALSFIFGPLRTV 298 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + I F + + + Q P +I + + LM K+ Sbjct: 299 TMGARIIMGVVTGIVFHLTNEIFGPVVMVYQIPAFIGAVVPSIIFTGFAAYLMNKR 354 >gi|108761666|ref|YP_631128.1| hypothetical protein MXAN_2917 [Myxococcus xanthus DK 1622] gi|108465546|gb|ABF90731.1| putative membrane protein [Myxococcus xanthus DK 1622] Length = 370 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 61/366 (16%), Positives = 134/366 (36%), Gaps = 10/366 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+L + + F+ + +V+Q L+ +++ S+ +L + ++ YL P Sbjct: 1 MNRLSRYLLGELLVPLGVWVAFMFLLLFVMQFLRGTDVLLGSSVTLVDMARLLAYLAPHF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M P F + L + + EL+ + G + L+ + +A+ LS+ + + + Sbjct: 61 LMMALPIAFLLAILLGLGRLGEDRELVALQALGIGPVRLLAAPMGIAVALSVLMLVITST 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +P + +K L ++ ++ +F+ +L + + + + + + D R+ Sbjct: 121 AQPWGLTGLKVLVSEVIRKNAVGDVKSGVFYEDLSNLTLYAEQVSADGKWTNVLLHDDRE 180 Query: 181 TQTHKIYYAQSGSIDLDRQAII----LNDGEVHRKSP-ISKDISIMKFKSYTLQT----E 231 + + AQ G + + L GEVHR + +++ SI++F + Sbjct: 181 ANSPLLVLAQRGQVGTSTSGEVLRFALEAGEVHRSAGRETEEYSIIRFDQAEISVGVGAS 240 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S + L+ + E YR H RL L P+ F L+ Sbjct: 241 MGKRSRFSYSREELTPGELMEA-AREAEAQGEDARMYRMALHSRLGNALAPIAFALLGTP 299 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 A R + + + + F + K + + +F + Sbjct: 300 LAMGRRQSGRAWGYLLTLGGYVLYYLLSRVFEQMGQKGQLPAGLAGQMANLVFVAVGLVA 359 Query: 352 LMIKKK 357 L + Sbjct: 360 LYRVSR 365 >gi|300866498|ref|ZP_07111188.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506] gi|300335455|emb|CBN56348.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506] Length = 369 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 138/358 (38%), Gaps = 19/358 (5%) Query: 4 FELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y+ + + FL + V + + + V+ S + ++I +P + Sbjct: 1 MDWYLTKELIGPFLFGVGLFSSVGVTVGAVFELVRRVTESGLPFSTAIQIFLLKMPYFIV 60 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + + + M+ ++E++ + + G + L+ P + L++ ++ F +I Sbjct: 61 LAFPMSMLLASLMAYSRMSSDSEIVALRSCGINVYRLVVPAVILSLAVTGMTFAMNELIV 120 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-----------YIKISKYNPNNTLQ 171 P +A + E+N+F+ ++ + ++ ++ Sbjct: 121 PAANYQATVTLDRALKREKPLFQEKNIFYPEFRNVDKGNGEESVLTRLFYAEQFDGKQMK 180 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT- 230 G+ I+D + ++I ++S + + + +G V+ +P +I++F+ LQ Sbjct: 181 GLTILDRSQPELNQIISSESAIWNPAQNSWDFFNGTVYIVAPDGSYRNIVRFEHQQLQLP 240 Query: 231 -ESANSSTIVLKANDQNLSFLLNP-NPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 + + + N++ ++ N + + + + ++ ++FGL+ Sbjct: 241 RTPLDLAAKARDYGEMNIAQAIDYLNLIRSSGDEQKIRKLKVRIQEKYALPFVCIVFGLV 300 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCI 346 K + + IS+ + F ++ FS+I + P++ +L I Sbjct: 301 GAALGTKPQ---RTGRATSFGISVIVIFT-YYVFSFITSSMGLKAILTPVMAAWLPMI 354 >gi|163759136|ref|ZP_02166222.1| hypothetical protein HPDFL43_05210 [Hoeflea phototrophica DFL-43] gi|162283540|gb|EDQ33825.1| hypothetical protein HPDFL43_05210 [Hoeflea phototrophica DFL-43] Length = 385 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 92/357 (25%), Positives = 172/357 (48%), Gaps = 12/357 (3%) Query: 16 FLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTN 75 S + Q+L R+++++++ ++ + ++ +IP+V+ +V PF + + Sbjct: 5 TFWSLTAATLLVMTTQVLIRVDVLTTTGQAFGAFMLLAATIIPSVISVVAPFALLIGVSQ 64 Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAK 135 VL+ MN ++EL++I+ G T+++PV+ L++ LSI + + N +EP + + A+ Sbjct: 65 VLSGMNSDSELVVIEAAGARPATVLRPVMALSVALSIMVLLVANFVEPWSNRKLYDVLAQ 124 Query: 136 AQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSID 195 AQ L + F +L+D LY+++++ P L GIF+ D+R T IYYA+SG I Sbjct: 125 AQSDLFSVAVRSGTFMKLEDGLYVQVNEKLPGGALSGIFLSDTRTDGTEAIYYAKSGVIQ 184 Query: 196 LDRQAII--LNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSSTIVLKANDQNLSFLL 251 + I L DGE+ ++ + ISI+ F SY L + + +Q+ +LL Sbjct: 185 PEGDTNILLLLDGELQQRDTSNDQISIVTFSSYALDMAAFVPAGQNAARRPKEQSTGYLL 244 Query: 252 NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR---QRKKIHPI 308 P P++ Y + E +R + WL+P+ FGLI+ K R + Sbjct: 245 AP-PSDDYYAGNAPYIIKEELVQRFSTWLYPLAFGLIAFAFLGKARSNRHEQFQNGALVA 303 Query: 309 FISLSI-SFGVFWGFSYIIHKIEQNP-YYIPILYLFLFCISSIFL--LMIKKKYTKI 361 I+L FG + + Y +P + + LF ++ L I K + ++ Sbjct: 304 GIALGARGFGFYSVEEAGASSAMEVLSYLVPGMLIVLFGALAVTGHTLTIPKAWARL 360 >gi|269792897|ref|YP_003317801.1| permease YjgP/YjgQ family protein [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100532|gb|ACZ19519.1| permease YjgP/YjgQ family protein [Thermanaerovibrio acidaminovorans DSM 6589] Length = 356 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 45/357 (12%), Positives = 114/357 (31%), Gaps = 12/357 (3%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQIL-QRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 IL + F + +L + +LV SL +++++ Y +P V+ P Sbjct: 2 ILMELLGPFAFGVAAFTVLMVAGSLLFRIADLVIQRGVSLGVVVRLFLYYLPGVVVTTIP 61 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + ++ ++E++ + G +++P++ + L S+ F+ + P Sbjct: 62 MGSLLGALMGFGKLSSHSEIVALKACGVPFRRMVRPLVVASALASVVTFVLNETVVPLSE 121 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDD---LYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A + +E +F R + + T + ++ Sbjct: 122 RAARNVLAYEIMRERPPEFKERMFLREEGSSGLRRVIYMDRIRPRTGEMEGVLVQEFEGG 181 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL--QTESANSSTIVLK 241 + + +G+ +P + F +L A Sbjct: 182 RLSRLTSARRAVWRDGKWTMEEGKTFEVAPDGGVKFLYSFARESLRLDLSPARVEAQSTD 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + ++ + + R FH RL ++ L+ A + R Sbjct: 242 PSQMSVFQM-AEQIGLMERQGSDATKLRVMFHLRLAVPWASLVLALVGASAGVRP--QRS 298 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--FCISSIFLLMIKK 356 + +S+ I F + S+ + + Y P++ ++ L M+++ Sbjct: 299 GGAGVGLGLSVVIVFLYYVVLSF-CQSLGEASYLPPVVAAWVPNLVFGVAGLFMVRR 354 >gi|33865647|ref|NP_897206.1| permease [Synechococcus sp. WH 8102] gi|33632817|emb|CAE07628.1| possible permease [Synechococcus sp. WH 8102] Length = 385 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 45/376 (11%), Positives = 122/376 (32%), Gaps = 22/376 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQ-ILQRINLVSSSTESLNILLKISGYLIPTVL 61 + +++ I L + + I + + + + L++ +P L Sbjct: 14 LLDRWLVGEILAPLLFAVAAFTVVGLSIGVMFELVRRLVEDGLPAWTALQVMLLSLPRFL 73 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P T + + N+EL + + G S + L+ P L L+ LL+ + ++I Sbjct: 74 VLSFPMATLFATLLAYSKLTANSELTALRSVGVSTVRLVVPALVLSALLTGMTLLFNDVI 133 Query: 122 EPKCRST-------------IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN 168 P+ + + + E + S+ Sbjct: 134 VPQANTQAEVTLQKALGRALATEKGKDIIYSRFGRVREPGSERSGRGLKQLFYSRRFDKG 193 Query: 169 TLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 + + ++D ++ A+ + DG++ + ++ + + F Y Sbjct: 194 EMVDVTVLDFSRAGFRQMLVAERALWNEGEAKWEFRDGQILTLN-LNGSTTRVDFDRYLY 252 Query: 229 QTESANSST--IVLKANDQNLSFLLNPNPNNPNYRP-ELLETYRSEFHKRLTQWLFPVIF 285 S + AN+ ++ + + + ++ T + V+F Sbjct: 253 PLSSGPLKVARLPDDANNMTIAEAIEAERVEAEAGNLKAARKLQVRIQEKFTFPMACVVF 312 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC 345 GLI + + + IS+ + G ++ S+ + +L +L Sbjct: 313 GLIGSSLGSRPGS--RTSRSQGFGISILLILG-YYALSFSFSSLGVKGVLPALLAAWLPV 369 Query: 346 ISSIFL-LMIKKKYTK 360 + S+ ++ ++ ++ Sbjct: 370 LISLGAGTLLLRQASR 385 >gi|323140935|ref|ZP_08075848.1| permease, YjgP/YjgQ family [Phascolarctobacterium sp. YIT 12067] gi|322414673|gb|EFY05479.1| permease, YjgP/YjgQ family [Phascolarctobacterium sp. YIT 12067] Length = 363 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 44/364 (12%), Positives = 115/364 (31%), Gaps = 12/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINL-VSSSTESLNILLKISGYLIPT 59 ++ + Y+L+ + F+ I +L +I ++ L + ++ Y +P Sbjct: 3 LRLLDRYVLKELLYPFVFGIAAFSSIFIASTMLFKITQYMTKYGAPLETVARLFMYNLPE 62 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 V+ P + ++ ++E+ + G S ++ PVL + +S+F + Sbjct: 63 VINYTFPMSMLLAALMAFGKLSGSSEITAMKAGGVSYYRIVAPVLVVGFFVSMFSMVWAE 122 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKI--SKYNPNNTLQGIFIVD 177 + P ++ + + T + ++ + ++ + + I Sbjct: 123 KVVPTSKAKASIILNEEIRHNTRPTTQNHIIIKTISGDTQRVTYANKFDEKLGKMTDITI 182 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + + + + DG V S KFK + + Sbjct: 183 EEFNKGKIARIQTAKEGYWENGSWRIVDGNVFALDDKDGVQSSAKFKEQIIPLNFSPKQI 242 Query: 238 IVLK--ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + + + L + + E R+ L F +I Sbjct: 243 SWEQKEPEEMTIREL-REYISMLEEQHTSAARQWCEIFMRINIPLASFFFAMIGACL--- 298 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLM 353 ++ + IS+ + F + ++ + + P+L L + + + Sbjct: 299 GTQKQRTSSSIGLGISIIVIFIYYAIMTFTTG-LGKGGAMPPLLACALPNILCLGVGVYL 357 Query: 354 IKKK 357 +KKK Sbjct: 358 MKKK 361 >gi|315125733|ref|YP_004067736.1| hypothetical protein PSM_A0635 [Pseudoalteromonas sp. SM9913] gi|315014247|gb|ADT67585.1| hypothetical protein PSM_A0635 [Pseudoalteromonas sp. SM9913] Length = 371 Score = 123 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 46/367 (12%), Positives = 130/367 (35%), Gaps = 23/367 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+ + +S + L ++ I + + + S + ++ + +P + Sbjct: 1 MLLIFRYLTTEVLKSQVAVFLTLMTIFLSQKFVVILGDASEGSIPAKLVFAMIALKLPQL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + + + ++E+ ++ G S +++ L +++L++ + Sbjct: 61 ASLILPLSLFLGIILAYSRIYADSEMTVLKACGVSEWYVVRITLISSVILALLAAVLTLY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P QL +A+ S L F + ++ + N + + ++ Sbjct: 121 VAPWASEQEYQLKEQAKADAGLSALRAGRFQQTGNEKAVVFIHNIENGGKELNKVFVAQL 180 Query: 181 TQTHKIYYAQ--------SGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 + K A+ Q ++L DG+ + + +++ +F Y++Q Sbjct: 181 PDSEKGDLARLVYAEQGVVIEAQSGEQQLVLTDGKRYETDGEAPSLNLTEFDGYSVQIRE 240 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 K L++ +++ RL L + L+++ Sbjct: 241 QEIEHQRRKLEAVPTRELMS----------INTPEAIAQWQWRLAIPLSIPLLTLLAVPL 290 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIF 350 + ++ K + ++S+ G F + + + P I + ++ L + Sbjct: 291 ---SVVNPRQGKFAKLVPAISLYLGYFILLNAAKFAVEDGKIPPSIGLWWIHLSALFIGS 347 Query: 351 LLMIKKK 357 LL+I+ + Sbjct: 348 LLIIRGR 354 >gi|15644481|ref|NP_229533.1| hypothetical protein TM1735 [Thermotoga maritima MSB8] gi|4982312|gb|AAD36800.1|AE001812_10 conserved hypothetical protein [Thermotoga maritima MSB8] Length = 1074 Score = 123 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 61/356 (17%), Positives = 123/356 (34%), Gaps = 6/356 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K Y+L+ FL+ + + + Q +L+ + L + Y +P Sbjct: 14 LKVLIKYLLKLSVVPFLIGLGGFIVFVSLEILYQLSDLIVRHRVGIEKLFLMLYYYLPYF 73 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + ++ EL+ I G S+ LI P L L LLSI +F + Sbjct: 74 VAMGVPVGVLLAIFWTFSRLSEERELMAIQVHGISQKNLIVPFLILGALLSIAVFFLSDQ 133 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P+ +S ++ +K L ++ EN+ ++ DD Y + KY+ + ++ Sbjct: 134 IVPEYQSKAEEAMSKYVLKKPEVFVVENVISKIGDDQYFYVEKYDERTSTMWNVVIFRYG 193 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS--TI 238 + + + + L DG + + F L + Sbjct: 194 HEETIV---TAKRVQKKGNDWYLFDGNYYTVDKDGFLKLDVHFSEMKLDITEDIEKLLRV 250 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + L + + E H R L P++ L+ + + L Sbjct: 251 GKTPKEMTGKELKEKIEFFKKVGVK-PSPWVVELHSRYANSLTPIVIVLVGVPLSLLFQL 309 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + + F+ + + G S + + NP P + +F I L ++ Sbjct: 310 RSKSWGVIFTFVLVVLYQGSGAWLSAMGKENLLNPVLAPWIPNIVFTIVGTLLFIL 365 >gi|310816137|ref|YP_003964101.1| putative permease, YjgP/YjgQ family [Ketogulonicigenium vulgare Y25] gi|308754872|gb|ADO42801.1| putative permease, YjgP/YjgQ family [Ketogulonicigenium vulgare Y25] Length = 379 Score = 123 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 64/356 (17%), Positives = 136/356 (38%), Gaps = 3/356 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y+L + F L ++ + WV + + + + S + + + ++ + +P + Sbjct: 1 MGRFDRYLLSQLMTLFGFFSLVLIMVYWVNRAVALFDQLISDGQGMWVFVEFTALSLPAI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V P + + V ++ +EL+++ +TG S +++ V+ ++ + + I ++ Sbjct: 61 IKLVLPLSAFVASVYVANRLSGESELVVVQSTGFSPARVMRAVMVFGLIAVVMVQILAHV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + A+ T L F + + I P LQ +F+ DSR Sbjct: 121 LVPLSNQRLNIRQAEVTQTATARILRAGEFMTPIAGVTLYIRSITPEGELQDVFLSDSRA 180 Query: 181 TQTHKIYYAQSGSIDLDR--QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + IY A I +++ DG + S ++ +S F + S S Sbjct: 181 SLADTIYTASRAYIVRTERAPQLVMVDGSIQNLSHQTERMSFTTFSDFAYDLSSILPSVD 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + +N + L + + R+E H RL++ L +I L+ Sbjct: 241 PAALSLRNATTLQLLLARDEMTLLFGADNIRTEIHDRLSEPLLGLIGPLLGFATLLIGGF 300 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R I ++ + V S I ++ LYL I L++ Sbjct: 301 SRFG-LSRQIAAAVGLVILVKMIESTATGAIRRDAGLWWTLYLPAVFGLGITGLLL 355 >gi|326799922|ref|YP_004317741.1| permease YjgP/YjgQ family protein [Sphingobacterium sp. 21] gi|326550686|gb|ADZ79071.1| permease YjgP/YjgQ family protein [Sphingobacterium sp. 21] Length = 358 Score = 123 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 43/361 (11%), Positives = 104/361 (28%), Gaps = 4/361 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 M + YI++ +F+ + +A + I +R++ + L+ I+ + IP Sbjct: 1 MNIIDKYIIKKYLGTFVFTMAIFTVVAVIFDISERMDDFLKNHAPLSKIVFEYYAGFIPF 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 L ++P + M TE++ I N G S ++P A ++ + I Sbjct: 61 YLNFLSPLINFIAVIFFTAKMADQTEIVPILNGGMSFRRFLRPYFIAASIICLVTLIFNI 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 I P+ + + + + N + + Sbjct: 121 YIIPRTNKLKIGFENIYVKPIDNNSKSSTHMQIDKNSFVYIDNFDNDRKVGYNFILETFK 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + A + D + + + + + +++ + K TL + Sbjct: 181 GQELQEKLIADRITWDSVKNNWKIENYTIRIVNGLNEKMIKGTSKDTTLDMSPRDFEIRD 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L + + E +KR I L+ + + Sbjct: 241 NVFMAMTTQELNENIEKEKIRGTGRMTDLKLEKYKRFIYPFSAYILTLMGVSL---SSKK 297 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYT 359 + + + +++SF + + + I L + K Sbjct: 298 VRGGIGLSLGVGIALSFTYILFIQFANMFSLKGGLPPLLAAFIPSLIFLGVGLYLLYKAP 357 Query: 360 K 360 K Sbjct: 358 K 358 >gi|303230241|ref|ZP_07317009.1| permease, YjgP/YjgQ family [Veillonella atypica ACS-134-V-Col7a] gi|303231004|ref|ZP_07317747.1| permease, YjgP/YjgQ family [Veillonella atypica ACS-049-V-Sch6] gi|302514386|gb|EFL56385.1| permease, YjgP/YjgQ family [Veillonella atypica ACS-049-V-Sch6] gi|302515167|gb|EFL57141.1| permease, YjgP/YjgQ family [Veillonella atypica ACS-134-V-Col7a] Length = 363 Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats. Identities = 47/368 (12%), Positives = 122/368 (33%), Gaps = 13/368 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPT 59 M+ + YIL+ FL I + + ++ L +++K +P+ Sbjct: 1 MRLLDKYILKAFVGPFLFGVFAFTSIFIGTGTLFRIAQYITEYGAPLLLVMKAFFLAMPS 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ + P + + + ++ +E++++ G S + L PV LA+L+SI Sbjct: 61 IILLTFPMSVLLGSLMAFSRLSSTSEIVVMRAGGLSFLRLAMPVYILALLISIGAVAFNE 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENL----FFRLDDDLYIKISKYNPNNTLQGIFI 175 + P+ + + + + + + ++ + + Y+ + + Sbjct: 121 FVVPRTNNMYQTIVREEIMKNASPQTQNHIVLKSMNGDNLSTLMYAKHYDSESKKLSMIT 180 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT--ESA 233 V + + + + + + Q +++ G ++ S MKFK L Sbjct: 181 VQQFNDKGELQQVENAENAEWNGQVWVMHSGIIYDVSAGEGVERTMKFKEQVLPIKSSPN 240 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 K + + L + E ++R T L +F L+ Sbjct: 241 EVQQDQRKPEELTIKELRHQIKAYKAAYT-NSNKLEMEMYQRFTIPLASFVFALVGAPLG 299 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF-CISSIFLL 352 +QR F + +++G + + + + + I L Sbjct: 300 L----QKQRSSSSIGFGISILIIFIYYGVMTFAGALGKGGALPTWMAAMIPDTLGIIAGL 355 Query: 353 MIKKKYTK 360 + + ++ Sbjct: 356 YLNWRVSR 363 >gi|114562103|ref|YP_749616.1| permease YjgP/YjgQ family protein [Shewanella frigidimarina NCIMB 400] gi|114333396|gb|ABI70778.1| permease YjgP/YjgQ family protein [Shewanella frigidimarina NCIMB 400] Length = 370 Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats. Identities = 59/365 (16%), Positives = 130/365 (35%), Gaps = 23/365 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++ + ++ L ++ I Q ++ + S ++++ + G +P + Sbjct: 2 IVFRYLISEVLKAQFAVLLVLLTIFISQQFVRVLADASDGEFPASLVMTLLGLNLPQLTV 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P F + M E++++ G S + + L LA +F + Sbjct: 62 LVLPLSFFLAILLAHGRMYAENEMVVLHGVGVSEWYVTRVTLLLAFANLLFTAYLSVYVG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-----D 177 P Q+ KAQ + L + F + + + + V Sbjct: 122 PWAEERQNQVLEKAQSEAGLAALTQGRFQASPNGRAVLFVEKINKDNTLDKVFVAQLPDP 181 Query: 178 SRDTQTHKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + I A G + D Q + L G ++ SP S ++ +++F Y ++ + Sbjct: 182 EDENGLTNIVVANKGRVIEDNIGSQQLQLEKGFRYQGSPKSLELQVIEFGGYKMEIKEQE 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 K + + LL+ +EF RL + + LI++ A Sbjct: 242 VDERRRKLSAMPIDELLDT----------PGPEAAAEFQWRLAIPIAIPLLTLIAVPLA- 290 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLL 352 + ++ K + ++ + G F + E P Y+ + ++ F + LL Sbjct: 291 --RVNVRQGKFAKMGPAILLYLGYFGLMIAGRKALQDEVVPQYLGMWWIHGFALLLGLLL 348 Query: 353 MIKKK 357 +IK++ Sbjct: 349 LIKER 353 >gi|299138457|ref|ZP_07031636.1| permease YjgP/YjgQ family protein [Acidobacterium sp. MP5ACTX8] gi|298599703|gb|EFI55862.1| permease YjgP/YjgQ family protein [Acidobacterium sp. MP5ACTX8] Length = 785 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 55/371 (14%), Positives = 138/371 (37%), Gaps = 15/371 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ F YILR + L+ + FI ++ +L + L S +L++ GYL+P Sbjct: 1 MRIFTRYILREVVGYALLGGVLFTFILFMRYLLALMELAVHGAASFADILRLIGYLLPYF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L+ + ++E+ + +G ++ ++ V +A+L ++ Sbjct: 61 LTLTIPMAVLIGILLGLSRLAADSEITAMRASGMGVLSFVRIVSIVAVLSWAVGLVNSLY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN---TLQGIFIVD 177 + P+ + + Q A+ ++ +F+ + + + P + + +F+ D Sbjct: 121 VAPRAAAALLQYEAQGASGEAAIQVQPRVFYEDFKNYVLYVQDVVPGSGAAEWKNVFLAD 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQ-----AIILNDGEVHRKSPISKDISIMK-FKSYTLQT- 230 T I +Q + + L+DG H + + + + F S L Sbjct: 181 LTQPATPHIITSQEALVTGTPGDPQTLRMQLSDGSRHDIAGNNPNQYDISTFASTELPIQ 240 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 + D + L + + Y E H+R + ++ L+ + Sbjct: 241 TGQQEEDSHISRRDTPIQALSMGELWKFAHGSGDTQPYFIELHRRFSYPAACLVLMLVGV 300 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF-CISSI 349 ++ K I+L + F ++ S++ + + ++ I + Sbjct: 301 PLGLS---SKRGGKGTGFAITLVLVFA-YYILSFVGSALARQGKLSAFAGVWGANIIFGV 356 Query: 350 FLLMIKKKYTK 360 +++ ++ ++ Sbjct: 357 AGVLLLQQMSR 367 Score = 120 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 51/369 (13%), Positives = 118/369 (31%), Gaps = 22/369 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y++ R+F + +V + + + I + L + + LIP +L Sbjct: 420 ILDEYVMGSFLRNFGLVLTSLVGLFLIFTFFELIGDIIKYRTPLVTVGEYLLNLIPFILY 479 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 VTP C + +++R +EL + TG S + PVL +A+ LS LF + Sbjct: 480 NVTPLCSLVAVLITFGALSRTSELTAMKATGVSLYRIATPVLLVALALSAILFAFDETYL 539 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD----------DLYIKISKYNPNNTLQG 172 P + L + + ++L + + Y Sbjct: 540 PAANRKQEALRSVIKGKPAQTFLRADRKWMSGQTLGNKEPTRIFYYQFFDSDKNVFANLT 599 Query: 173 IFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 +F + +A S D + +G S S F + Sbjct: 600 VFEFQPGTFTLTRRIFATSARWDDSVNRWVFENGWQRTFS-GDAISSYQPFTLNSFPEIH 658 Query: 233 ANS---STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 ++ + + S L + + R + ++++ L ++ +++ Sbjct: 659 EQPGYFKKEDRQSQEMSYSEL-SKYIRDLKQSGFDTTRLRVQLNRKIAYPLMALVMAILA 717 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF---LFCI 346 + A +R + + + ++ +W + I + IL + + Sbjct: 718 VPFALS---TGKRGGLAGMGAGIGVAIS-YWVIAAIFENLGNVNSLPSILAAWSPDILFA 773 Query: 347 SSIFLLMIK 355 L+++ Sbjct: 774 MVGTYLLLR 782 >gi|163803713|ref|ZP_02197573.1| putative permease [Vibrio sp. AND4] gi|159172496|gb|EDP57361.1| putative permease [Vibrio sp. AND4] Length = 356 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 53/355 (14%), Positives = 122/355 (34%), Gaps = 2/355 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +LYI R I + + V ++ +I+ ++++ V T L L IP + Sbjct: 3 KLLDLYIGRTIISTTALVLATFVGLSGIIKYVEQLRKVGRGTYDLMHALYFVLLSIPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++ + VL A+ L + + Sbjct: 63 EMFFPMAALLGALIGLGMLASSSELVVMQAAGFSKLDIGLSVLKTAVPLMLIVMTLGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + + L+ + D + +I I K + D Sbjct: 123 APEAQ-KMARDLRAFALSGGSIVSMRAGVWARDANDFIFIGKVEDDKLYNLNMWRFDEDK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + K+ +A+ D ++ ++ + ++ + + + +K Sbjct: 182 KLDKVIFAEEVDYQQDNNWLMRYVQVTDMENENAITKRDIEQMEWHTSLAPDKLAVVTVK 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + +LS L + + + Y F ++L+Q L + L+++ Sbjct: 242 PEELSLSGLYD-YVSYLKATEQDASRYELAFWRKLSQPLSIAVMMLMALSFVFGPLRSVT 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + SF + F + + P L L ++ L+ +K Sbjct: 301 MGARILSGVVAGFSFYISSEFFGPLSLVYGIPPVFGALAPSLVFLAIAIALLRRK 355 >gi|332535155|ref|ZP_08410964.1| putative permease [Pseudoalteromonas haloplanktis ANT/505] gi|332035425|gb|EGI71924.1| putative permease [Pseudoalteromonas haloplanktis ANT/505] Length = 370 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 49/365 (13%), Positives = 123/365 (33%), Gaps = 23/365 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + +S + L ++ I +++ + S + ++L + +P + Sbjct: 2 LIFRYLTAEVLKSQVAVFLTLMTIFLSQKLVGILGDASEGSIPAKLVLSMIALKLPQLAS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + + ++E+ ++ G S +++ L ++ L+I I Sbjct: 62 LILPLSIFLGIILAYSRIYADSEMTVLKACGVSEWYVVRVTLISSVGLAILAAALTMYIA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD----LYIKISKYNPNNTLQGIFIVDS 178 P QL +A+ S L F ++ I K + + Sbjct: 122 PWASEQEYQLKEQAKADAGLSALRAGRFQETGNEKAVVFIHNIEKGGKELNKVFVAQLPD 181 Query: 179 RDTQTHKIYYAQSG----SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + Q ++L DG+ + + +++ +F Y++Q Sbjct: 182 SEKGNLARLVYAEQGVVVEAVNGEQQLVLTDGKRYETDGTTPALNLTEFDGYSVQIREQE 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 K + LL +++ RL L + L+++ Sbjct: 242 IEHQRRKLEAVPTNQLL----------AINTPESIAQWQWRLAIPLSIPLLTLLAVPL-- 289 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLL 352 + ++ K + ++S+ G F + + + P I + ++ L + LL Sbjct: 290 -SVVNPRQGKFAKLVPAISLYLGYFILLNAAKFAVEDGKIPPSIGLWWIHLSALFIGGLL 348 Query: 353 MIKKK 357 +IK + Sbjct: 349 IIKGR 353 >gi|282897128|ref|ZP_06305130.1| permease YjgP/YjgQ [Raphidiopsis brookii D9] gi|281197780|gb|EFA72674.1| permease YjgP/YjgQ [Raphidiopsis brookii D9] Length = 391 Score = 122 bits (305), Expect = 8e-26, Method: Composition-based stats. Identities = 52/368 (14%), Positives = 127/368 (34%), Gaps = 16/368 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQ-ILQRINLVSSSTESLNILLKISGYLIPTV 60 + Y+ + FL + I + + + V S +NI LK+ +P V Sbjct: 19 SIMDRYLAMQLLPIFLFGVGAFTSVVLAIDSLFELLRKVVESGLPINIALKVFVLKLPYV 78 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + T + ++ ++EL+ + G S ++ + L+ L++ ++ Sbjct: 79 MVYSFPMSTLLATLMTYSKLSSDSELIALRGCGVSVYRMVLTAVLLSGLVTGMTYVFNEY 138 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI------------KISKYNPNN 168 I P +A + S+ +EN+++ + + Sbjct: 139 ISPAANYEASITLEQALKSDQPSFKQENIYYPEYREEKTKDGGTSRLLARLFYADEFDGK 198 Query: 169 TLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 ++G+ I+D ++I ++S + +Q +G ++ +P +I++F+ L Sbjct: 199 KMKGLTIIDRSKAGVNQIVVSESAQWNAYKQVWDFYNGTIYLVAPDRSYRNILRFEHQQL 258 Query: 229 QTESANSSTIVL--KANDQNLSF-LLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIF 285 + S + N++ L P+ ++ +++ +IF Sbjct: 259 KLPSTPLIVAKNSRDYEEMNIAQSLQQLEIEKLAGNPQRIKKLEVRIQQKIAFPFICIIF 318 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC 345 GL+ + + I + I + + + +P+ L Sbjct: 319 GLVGSAMGTIPQRTGRGRSFGVSIIVIFIYYLLLSVCGALAQAEILSPFVGAWLPNLCGL 378 Query: 346 ISSIFLLM 353 I +LM Sbjct: 379 GMGIVILM 386 >gi|294795168|ref|ZP_06760302.1| putative membrane protein, YjgP/YjgQ family [Veillonella sp. 3_1_44] gi|294453960|gb|EFG22335.1| putative membrane protein, YjgP/YjgQ family [Veillonella sp. 3_1_44] Length = 363 Score = 122 bits (305), Expect = 8e-26, Method: Composition-based stats. Identities = 50/368 (13%), Positives = 121/368 (32%), Gaps = 13/368 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPT 59 M+ + YIL+ FL I + + ++ L +++K +P+ Sbjct: 1 MRLLDKYILKAFVGPFLFGVFAFTSIFIGTGTLFRIAQYITEYGAPLVLVMKAFVLALPS 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ + P + + + ++ +E++++ G S + L PV +A+++SI Sbjct: 61 IVILTFPMSVLLASLMTFSRLSSTSEIVVMRAGGLSFLRLAMPVYIIALIISIGAVAFNE 120 Query: 120 IIEPKCRSTIK----QLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI 175 + P+ + + + K T +++ D + YN + Sbjct: 121 FVVPRTNNMYQTIVREQIMKNASPQTQNHIVLKTMNGNDLGTLMYAKSYNAETKKLSMIT 180 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE--SA 233 V + + + Q ++ +G ++ S MKFK +L + Sbjct: 181 VQQFGEGGKLQQVENADTAVWNGQYWVMQNGIIYDISAGDGVERTMKFKEQSLPIKSAPK 240 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + K + + L + E ++R T L +F L+ Sbjct: 241 DIQQDQRKPEELTIKELRHQIKAYKAAYT-NANKLEMEMYQRFTIPLASFVFALVGAPLG 299 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF-CISSIFLL 352 +QR F + +++G + + + + + I L Sbjct: 300 L----QKQRSSSSISFGISILIIFIYYGVMTFAGALGKGGALPTVFAALIPDTLGIIAGL 355 Query: 353 MIKKKYTK 360 + + +K Sbjct: 356 YLNWRVSK 363 >gi|313674434|ref|YP_004052430.1| permease yjgp/yjgq family protein [Marivirga tractuosa DSM 4126] gi|312941132|gb|ADR20322.1| permease YjgP/YjgQ family protein [Marivirga tractuosa DSM 4126] Length = 357 Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats. Identities = 59/357 (16%), Positives = 114/357 (31%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL+ +F+ L I+ I VI ++ + L +L G IP + Sbjct: 1 MKILDKYILKKFLSTFVFVVLIILAIVTVIDYTEKNDDFMEHNLGLIDVLPYYGAFIPWI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++TP + V + M +TE++ + +G S L+ P + A L+++ F Sbjct: 61 GNLITPITIFIAAVFVTSKMAGHTEIVAMLASGMSFRRLLVPYMIGAGLVALSSFYLNAY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P T + + + S N + + D Sbjct: 121 VIPDANKTRIAFETAYIKKPFYFTERDIHLKIAPETYAYMESYNNQRDVGYRFTLELIED 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + A+ D + + D + + +++ S K L + Sbjct: 181 KNLKEKLSARRIEWDSAQSNWKVKDWTLRKFDGLTETYSEGKELDTVLNITPKDFGNTYG 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 L+ L + + ++ Y E + R +I I ++ + K+ Sbjct: 241 LQETLTLTELNDYISLLKERGADNVKIYLIERYIRFMAPFAAIILTFIGVILSSKKKRGG 300 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 +I F+ I F I NP L F I + L + Sbjct: 301 TGFQIALGFVIAFIFIIFFILSKAIAENSTMNPILAVWLPNITFSIVGLILYKFVPR 357 >gi|157363796|ref|YP_001470563.1| permease YjgP/YjgQ family protein [Thermotoga lettingae TMO] gi|157314400|gb|ABV33499.1| permease YjgP/YjgQ family protein [Thermotoga lettingae TMO] Length = 1102 Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats. Identities = 64/355 (18%), Positives = 135/355 (38%), Gaps = 3/355 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI++ L+ V V + Q +L+ + +LLK+ Y +P Sbjct: 1 MGILTKYIIKLSVGPMLIGLAGFVIFVSVEILYQLSDLIVRHRVGIFVLLKVLYYYLPYF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + VL+ ++ + EL+ + G S LI P L L+I LS ++ + Sbjct: 61 VALGIPVGILLSIFWVLSQLSTDHELMALQVHGISLKVLIVPFLILSIALSFVTYVLSDR 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + +K ++ EN+ ++D+ Y + KY+ N + ++ + Sbjct: 121 IVPLYNQKADSVISKYVYKRPEVFISENVLTKIDESQYFYVKKYDRQNGILEDVVLFRNE 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 +I A+ + ++ + DG+++R + F L + S + + Sbjct: 181 PSEEEIITAKK--VVKEKNKWFMYDGKMYRVDKDGVLRFDISFNKVELDLQEDIESIMRV 238 Query: 241 KANDQNL-SFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 +++ S L + + E H R + L PVI LI I + L Sbjct: 239 GKTPKDMRSEELKERIDTFKKLGVDPAPWIVELHTRYSLSLGPVIIVLIGIPLSLMFNLK 298 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + + F+ + + G + + +P + +F ++ L ++ Sbjct: 299 SKSWGVILTFVIVVLYQGSGAWLGAMGKERLVDPVTSAWIPNTIFGVTGALLFLL 353 >gi|332991779|gb|AEF01834.1| lipopolysaccharide ABC transporter permease [Alteromonas sp. SN2] Length = 353 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 49/354 (13%), Positives = 126/354 (35%), Gaps = 3/354 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +LYI R + + ++ ++ ++ +I+ ++++ V + + +P L Sbjct: 3 KILDLYIARTLLGTVTVTLSVLIGLSALIKFVEQLRKVGEGDYDMMVAFLYVVLSLPRDL 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + + + N+EL+++ G SR +I + A ++ + + + Sbjct: 63 EQFFPMATLLGGLIGMGVLASNSELVVMQAAGMSRWNIIVSTMKSATIMILLVMAVGEWV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P S K++ +A + E+ ++ + + + ++ + D Sbjct: 123 TPFSESKAKEIRTEAISGGSLFSSEQLVWAKDGEHFVSIGEVLSRDSLKDINIFDFNDDL 182 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 I YA+SG+ D L+D +V R S + + K + + +K Sbjct: 183 SLESITYAKSGNF--DGSEWRLSDVDVTRFSETAVTLDNEKSMQWNSTLTPDKLGIVAVK 240 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 ++S LL+ + Y +++ Q + + L+++ Sbjct: 241 PEALSISGLLD-YVGYLANNGQDPSRYELALWRKILQPVSVGVMLLMALSFIFGPLRSVT 299 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + F + + + Q P ++ L L + +++ K Sbjct: 300 MGARVIMGVLTGFGFFILNEVFGPLSLVYQIPPFLGALLPSLLFAAIAAIMLRK 353 >gi|89070356|ref|ZP_01157663.1| Predicted permease [Oceanicola granulosus HTCC2516] gi|89044003|gb|EAR50178.1| Predicted permease [Oceanicola granulosus HTCC2516] Length = 370 Score = 122 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 59/345 (17%), Positives = 133/345 (38%), Gaps = 7/345 (2%) Query: 16 FLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTN 75 F L ++ + WV + + + + S +S + L+ S +P ++ +V P + Sbjct: 4 FGFFSLVLILLYWVNRAVVLFDQLISDGQSALVFLEFSALSLPAIIRIVLPLAAFIAALY 63 Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAK 135 V + +ELL++ +TG S + L +P +++++ +++ P + + + Sbjct: 64 VTNKLTTESELLVVQSTGFSPVRLARPAFVFGLIVTLLTGALTHVLVPVAAAQLGARQDE 123 Query: 136 AQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSID 195 +T +L F D + + + N LQ +F+ D+R++ IY A + + Sbjct: 124 IASNITARFLTPGQFLNPVDGITVYVRDINDAGALQDLFLADTRESGRQVIYTAATAYLV 183 Query: 196 L--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSF--LL 251 +++ DG + + +F +T S + ++N+ LL Sbjct: 184 RSEGGPQLVMVDGLAQTLRGSDQRLYTTRFDDFTYDIGRLIVSEEPGRLRERNVWSGPLL 243 Query: 252 NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFIS 311 +P R+E H R+ + L + ++ A R I ++ Sbjct: 244 QASPALQAQIERPAVALRAEVHDRMNKALLGFVGPVLGFAALLIGGFSRFG-VWRQIVVA 302 Query: 312 LSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI--FLLMI 354 + + V S ++ +P P+LY+ +I L + Sbjct: 303 VVLVVVVTSLESVSSTLVDADPTRWPLLYMPTLVGLAIASALFWL 347 >gi|193215417|ref|YP_001996616.1| permease YjgP/YjgQ family protein [Chloroherpeton thalassium ATCC 35110] gi|193088894|gb|ACF14169.1| permease YjgP/YjgQ family protein [Chloroherpeton thalassium ATCC 35110] Length = 360 Score = 122 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 51/363 (14%), Positives = 111/363 (30%), Gaps = 9/363 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI R + + L V + ++ ++++++ L ++ + Y P + Sbjct: 1 MKILDRYIFREYFSTLGFAILAFVSLFILVDLIEKVDDFLDKNVELKLIAQYYLYFTPEI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + + V + + TEL + G S L+ P + ++ F Sbjct: 61 IKLIVPISTLLASLFVTGKLAKQTELTAMKAGGISLYRLLLPFFLVGAIIGGIDFYLSGW 120 Query: 121 --IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 E + + S + + T Q + + + Sbjct: 121 VVPETTKFKEQFDATYLGKTKWKSSSFSNIELLENPNRIVRIGYFNKDTRTCQNVSLQNY 180 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISI-MKFKSYTLQTESANSST 237 + + A + D I + S K + L + Sbjct: 181 QKSHMLWRIDAAKMTYDTSLSRWIFYQAYYRDFQSGKEQFSYAAKIDTVQLVFSAKELEE 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + +L ++ ++H +++ + +I LI + A Sbjct: 241 NNAALDQMSLDEHWKYIEARRRAGFSNVDEALVKYHIKISFPIACLIVILIGVPL---SA 297 Query: 298 LVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 ++ ISL I F FS + +K +P + FLF + L Sbjct: 298 EKKRSGIALEAGISLLIGFLYIILQKTFSTLGYKGAVDPILSAWIPNFLFLTVGLVFLFK 357 Query: 355 KKK 357 KK Sbjct: 358 AKK 360 >gi|257468008|ref|ZP_05632104.1| hypothetical protein FulcA4_01652 [Fusobacterium ulcerans ATCC 49185] gi|317062294|ref|ZP_07926779.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185] gi|313687970|gb|EFS24805.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185] Length = 362 Score = 122 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 56/362 (15%), Positives = 129/362 (35%), Gaps = 13/362 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI + +SF +S + V I V Q+ + I VS S N + +IP +L Sbjct: 4 KIIDKYISKNFIKSFFLSLIAFVGIFLVSQLFKVIRYVSDGRFSANESITYILTMIPKIL 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 V P + + ++SM N E++ + G S ++ + ++ ++++ +F + + Sbjct: 64 IDVAPLAVLLGSLMTVSSMASNLEIISLKTAGISFKRIVLFPICISAVIAVMVFYINDSL 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV----D 177 P +++ + ++N F R ++ Y+ + T G I + Sbjct: 124 YPYSVRKNREIKDGERAKREMPVEKKNAFLRGENSNYVYLMGKINRETGFGENIEIVDLN 183 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + +I A+ G + ++ +L D ++ + K + F E T Sbjct: 184 EEFNKVERIITAKEGRYNFSKKVWVLKDANIYDGEKLEKPKEVKIFTENKYDDEPEKFIT 243 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 ++ + L + E R + I + + Sbjct: 244 KSVEPKTLTIKEL-KKSVREIKSIGGDTRELLVEIGNRYSFPFSSFIISFLGLSLG---- 298 Query: 298 LVRQRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMI 354 R + I ++LS++ G ++ + N + P + ++ I + + Sbjct: 299 -SRYVRGASAISMALSVALGYGYYIVQASFEALSINGFLNPFISGWIPNIIFLGIGIYFM 357 Query: 355 KK 356 + Sbjct: 358 YR 359 >gi|313895766|ref|ZP_07829321.1| permease, YjgP/YjgQ family [Selenomonas sp. oral taxon 137 str. F0430] gi|312975595|gb|EFR41055.1| permease, YjgP/YjgQ family [Selenomonas sp. oral taxon 137 str. F0430] Length = 366 Score = 122 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 41/365 (11%), Positives = 123/365 (33%), Gaps = 12/365 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + YI R + SFL + + + + ++ SL ++KI + +P V Sbjct: 6 RILDKYIFREVFVSFLFAICAFSAVFIGSGTLFRIAQYITDYGASLPSVIKIFVFSLPGV 65 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + ++ +E+ + + G + + P + L ++S+ + Sbjct: 66 VMWTFPMSMLLASLLTFGKLSSASEITAMKSCGINFTRIAAPAVLLGFVVSVGAILFNEY 125 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD----DLYIKISKYNPNNTLQGIFIV 176 + P+ + + + + +E++ + + Y+ + Sbjct: 126 VVPRANTAYRNVIYYEIEGNSGMKSQEHVIIKEITDGQIRRLVYARAYDAEQQRLTNVSL 185 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + + I++ G+V+ M+F++ L + Sbjct: 186 QVFGDDGKVSHVENAEYAEWTGKEWIMHSGDVYDI-ADEHMERHMRFETQVLPVQKDPRQ 244 Query: 237 TIV-LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 I K+ ++ L + +E ++R++ + +IF LI + + Sbjct: 245 IIREQKSPEEMTMRELRRQIALMQTQYVNTNKLEAELYQRVSVPMASLIFTLIGVPLGIQ 304 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF-CISSIFLLMI 354 F I ++ + + + P+L +++ + I ++ Sbjct: 305 PTRNSSSAG----FAMSVIIIFFYYALMTMGNAFARGGVLPPMLAVWIPNIVGIIAGAIL 360 Query: 355 KKKYT 359 ++ + Sbjct: 361 FRRAS 365 >gi|119471262|ref|ZP_01613765.1| hypothetical protein ATW7_11360 [Alteromonadales bacterium TW-7] gi|119445728|gb|EAW27011.1| hypothetical protein ATW7_11360 [Alteromonadales bacterium TW-7] Length = 354 Score = 122 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 52/356 (14%), Positives = 125/356 (35%), Gaps = 3/356 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ + Y+ R I ++ + L +V I+ +I+ ++++ V + L + + Y IP Sbjct: 1 MKTLDWYLGRSILQTTGFALLVLVGISTLIKFIEQLKSVGRGSYDLITAMLYTLYSIPGD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L ++ N+EL+++ G SR+ +I V+ A+ ++I + Sbjct: 61 LVVFFPMAALIGGLTGLGALASNSELVVMQAAGMSRLQIIGSVMKTAMFMAICMMALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + K++ +A ++ ++ + ++ Sbjct: 121 GAPEAQLRAKEMRNQAIHGGDVFSAQKGVWAKDGNNFINIEDVDESGKLNGLHMYYFDSS 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + +I A+ D +L D + + + Y Q + + + Sbjct: 181 LELTQITKAKEAISRKDG--WLLRDVNKVIITDELITTELHPEEFYPSQLTAEKLGVVSV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K + + L + + TY ++ Q + + L+++ Sbjct: 239 KPESLSFTGL-WSYLSYLEQNEQDTSTYDLALWRKFMQPVSVAVMLLVALSFIFGPLRTV 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + I F + + + Q P I + + I LM K+ Sbjct: 298 TMGARIIMGVVTGIVFHLTNEIFGPVVMVYQIPAIIGAVLPSVIFIGFATYLMNKR 353 >gi|313668050|ref|YP_004048334.1| hypothetical protein NLA_7120 [Neisseria lactamica ST-640] gi|313005512|emb|CBN86948.1| conserved hypothetical integral membrane protein [Neisseria lactamica 020-06] Length = 356 Score = 122 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 49/363 (13%), Positives = 120/363 (33%), Gaps = 10/363 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +IL + + + +L + +P Sbjct: 1 MNLISRYIIRQMTAMTVYTLLAFLALYSFFEILYETGNLGKGSYGIWEMLGYTALKMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L + ++EL +I G S L+ + ++ ++ Sbjct: 61 AYELMPLATLIGGLLSLGRLAADSELTVIKAGGVSTRKLLSVLSQFGLIFALATAALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + + A A + + + + I I + P++TL GI I + D Sbjct: 121 IAPALNQKAENIKAAAINGKISTGN--TGLWLKEQNSIINIREMLPDHTLLGIKIWERND 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ D + L + + S ++ + + +++ Sbjct: 179 KNELVQATEAESAVLNDDGSWQLKNIRRSTLGEDKVETSTAAEENLPISVKRNLMEVLLV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K + ++ L ++ + + Y +L + + L+++ R Sbjct: 239 KPDQMSVGELT-AYISHLENNRQNTQIYAIALWHKLVYPVAAWVMALVALAF--TPQTTR 295 Query: 301 QRKKIHPIFISLSISFGVFW---GFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 +F + + + F + P+ IL LF + I +I+K+ Sbjct: 296 HGNMGLKLFGGICLGLLFHFAGRLFGFTARLYGVPPFLAGILPTALFALIGI--WLIRKQ 353 Query: 358 YTK 360 + Sbjct: 354 EKR 356 >gi|261401001|ref|ZP_05987126.1| permease, YjgP/YjgQ family [Neisseria lactamica ATCC 23970] gi|269209118|gb|EEZ75573.1| permease, YjgP/YjgQ family [Neisseria lactamica ATCC 23970] gi|309378517|emb|CBX22870.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 356 Score = 122 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 49/363 (13%), Positives = 120/363 (33%), Gaps = 10/363 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +IL + + + +L + +P Sbjct: 1 MNLISRYIIRQMTAMTVYTLLAFLALYSFFEILYETGNLGKGSYGIWEMLGYTALKMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L + ++EL +I G S L+ + ++ ++ Sbjct: 61 AYELMPLATLIGGLLSLGRLAADSELTVIKAGGVSTRKLLSVLSQFGLIFALATAALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + + A A + + + + I I + P++TL GI I + D Sbjct: 121 IAPALNQKAENIKAAAINGKISTGN--TGLWLKEQNSIINIREMLPDHTLLGIKIWERND 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ D + L + + S ++ + + +++ Sbjct: 179 KNELVQATEAESAVLNDDGSWQLKNIRRSTLGEDKVETSSAAEENLPISVKRNLMEVLLV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K + ++ L ++ + + Y +L + + L+++ R Sbjct: 239 KPDQMSVGELT-AYISHLENNRQNTQIYAIALWHKLVYPVAAWVMALVALAF--TPQTTR 295 Query: 301 QRKKIHPIFISLSISFGVFW---GFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 +F + + + F + P+ IL LF + I +I+K+ Sbjct: 296 HGNMGLKLFGGICLGLLFHFAGRLFGFTARLYGVPPFLAGILPTALFALIGI--WLIRKQ 353 Query: 358 YTK 360 + Sbjct: 354 EKR 356 >gi|332292438|ref|YP_004431047.1| permease YjgP/YjgQ family protein [Krokinobacter diaphorus 4H-3-7-5] gi|332170524|gb|AEE19779.1| permease YjgP/YjgQ family protein [Krokinobacter diaphorus 4H-3-7-5] Length = 358 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 47/362 (12%), Positives = 127/362 (35%), Gaps = 9/362 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI++ +F+ + + I ++ + ++I+ + ++ + Sbjct: 1 MKILDWYIVKRYIGTFVTMLVLFIPIGIIVNLAEKIDKILANEAPFGEVALYYLNFTIYF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + + + NTE++ ++G S ++P L A ++ + F Sbjct: 61 ANLLFPLFLFLSVIWFTSKLANNTEVIAFLSSGVSFYRFLRPYLIGATIVCVGAFFLGTY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ + + +N++ ++D YI +S + P F + + Sbjct: 121 LAPRANKGYNEFIFEYLKKNKKDRETQNVYRQIDTGDYIYVSSFTPRTKTGRNFTWEHFE 180 Query: 181 TQTHKIYYAQ-SGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + + LN + + + + + + + Sbjct: 181 GNKMTYKMSAIRIRYNEEDTTYTLNSFKKRTITENGDILESKAKLDTVFNFDMDDLTPVE 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 A + L + + Y KR + + I +I++ A+ Sbjct: 241 YIAETLSTPELRKFIAKEKSRGSSYISRYEVTLQKRYSLPVAAYILTIIAVAV---SAMK 297 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF----LFCISSIFLLMIK 355 R+ + + ++F VF F + + + + P++ ++ LF I +++LL Sbjct: 298 RRGGMGINLAFGIVLAF-VFIFFDKVFGTLAEQSDFPPLVAVWTPNILFAILAVYLLRNA 356 Query: 356 KK 357 K+ Sbjct: 357 KR 358 >gi|237653448|ref|YP_002889762.1| permease YjgP/YjgQ family protein [Thauera sp. MZ1T] gi|237624695|gb|ACR01385.1| permease YjgP/YjgQ family protein [Thauera sp. MZ1T] Length = 358 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 42/357 (11%), Positives = 105/357 (29%), Gaps = 4/357 (1%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 Y+ R I + + + + + + + V +L L G +P + Sbjct: 5 LLRYLAREIFAASALVLVAFLGLFAFFDFINELEDVGKGGYTLYQALVYVGLTLPARVYE 64 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 + P + T L ++ +N+E+ ++ +G S L+ VL L + L Sbjct: 65 LMPIAVLIGTLYALATLAKNSEITVMRASGMSN-ALLTSVLGLIGGVFAVLIFLVGEYVA 123 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + T S + + D L + + P+ +++G I + Sbjct: 124 PPAEAAAEEWKLTATQATVSQQLRSGLWVKDGRLVLNVRTLMPDRSMRGARIYAFDEDYA 183 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 + + + L D + R +I + + + +++ Sbjct: 184 LESIAEAATGVFDGSGEWKLLDVQRTRFHGDRTEIERLPEIRWRSELTPEVLGVLMVSPE 243 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 L N+ + + + K+L ++ +++ R Sbjct: 244 HMPFGRL-WTYINHLRDNNQNADRFEIALWKKLIYPFTALVMMALAMPFGFI--HDRMGG 300 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 IF+ + + G + N + + L I + + + Sbjct: 301 ASARIFMGVMLGVGFHLLNGLFSNLGMINAWPPFMAALTPSLIFLAAAFWLMHRVER 357 >gi|114048398|ref|YP_738948.1| permease YjgP/YjgQ family protein [Shewanella sp. MR-7] gi|113889840|gb|ABI43891.1| permease YjgP/YjgQ family protein [Shewanella sp. MR-7] Length = 352 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 44/355 (12%), Positives = 118/355 (33%), Gaps = 3/355 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK +LYI R + + + L + ++ +I+ + ++ LV + ++ +L+P Sbjct: 1 MKILDLYIARVLLSTSALCLLVLTGLSGIIKWVDQLRLVGRGSYTMMDAGIYVLFLVPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + + N+EL+++ +G SR+ + + A+ L + + Sbjct: 61 IEMFFPMAVLLGALIGMGMLASNSELVVMQASGMSRLQITLSAMKTAVPLMLMVMALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P +L+ + D DL++ I + + L I + Sbjct: 121 GAPVAEQK-ANELQAIKLSGGSLIKSHRGIWAKDGDLFVNIGEVADIDKLNNITLYKFNS 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ + ++ D + S + + + S + + Sbjct: 180 ELKLTNVVHAKSALFSNDSWHLM-DVKRTDLSYDEVKLEHLDEDIWRSSLTPDKLSVVSV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K ++ L+ + + Y +++ Q + + L+++ Sbjct: 239 KPEALSIRGLM-GYLDYLKNNSQDPSRYELALWRKVMQPVTVGVMMLVALSFVFGPLRTV 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + SF + + + + P Y+ + L F + + Sbjct: 298 TMGARVLLGVVAGFSFYISNEIFGPMSIVYELPAYVGAIAPSLLFTGIAFYFIRR 352 >gi|153834586|ref|ZP_01987253.1| permease YjgP/YjgQ family protein [Vibrio harveyi HY01] gi|148869029|gb|EDL68074.1| permease YjgP/YjgQ family protein [Vibrio harveyi HY01] Length = 356 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 51/355 (14%), Positives = 119/355 (33%), Gaps = 2/355 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +LYI R I + + V ++ +I+ ++++ V L L IP + Sbjct: 3 KLLDLYIGRTIISTTALVLATFVGLSGIIKYVEQLRKVGRGAYDLMHALYFVLLSIPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++ + VL A+ L + + Sbjct: 63 EMFFPMAALLGALIGLGMLASSSELVVMQAAGFSKLDIGLSVLKTAVPLMLIVMTLGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + + L+ + D + +I I K + D Sbjct: 123 APEAQ-KMARDLRAFALSGGSIVSVRAGVWARDANDFIFIGKVEDDKLYGLNMWRFDEDK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + K+ +A+ D ++ ++ ++ + + + +K Sbjct: 182 KLDKVIFAEEVDYQQDNNWLMRYVQVTDMENENVITKRDVEQMEWHTSLAPDKLAVVTVK 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + +LS L + + Y F ++L+Q L + L+++ Sbjct: 242 PEELSLSGLYD-YVTYLKASEQDASRYELAFWRKLSQPLSIAVMMLMALSFVFGPLRSVT 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + +F + F + + P L L ++ L+ +K Sbjct: 301 MGARVLSGVVAGFTFYISSEFFGPLTLVYGIPPVFGALAPSLVFLAIAVSLLRRK 355 >gi|292669943|ref|ZP_06603369.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541] gi|292648414|gb|EFF66386.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541] Length = 366 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 36/362 (9%), Positives = 115/362 (31%), Gaps = 11/362 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + YI R + SFL + + + + ++ SL ++KI + +P V Sbjct: 6 RILDKYIFREVFSSFLFAICAFSAVFIGSGTLFRIAQYITDYGASLPSVIKIFVFSLPGV 65 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + ++ +E+ + + G + P + L ++S+ Sbjct: 66 VMWTFPMAMLLASLLTFGRLSSASEITAMKSCGIGFGRIAAPAILLGFIVSVGAIFFNEH 125 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD----DLYIKISKYNPNNTLQGIFIV 176 + P+ + + + + +E++ + + + Y+ + Sbjct: 126 VVPRANTAYRNVIYYEIEGNSGMKSQEHVIIKEIEEGQIRRLVYARSYDAEQERLTGISL 185 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + I+++G+V+ + + + + Sbjct: 186 QVFGDDGKVTHVENAEYAEWTGTEWIMHNGDVYDIADEHLERRMRFETQVLPVQKDPRQI 245 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 K ++ L + +E ++R++ + +IF LI + + Sbjct: 246 IREQKVPEEMTMRELRHQIALMQTQYVNTSKLEAELYQRVSVPMASLIFTLIGVPLGLQP 305 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--FCISSIFLLMI 354 F I ++ + + + P+L +++ +++ Sbjct: 306 TRNSSSAG----FAMSVIIIFFYYALMTMGNAFARGEVLPPMLAVWIPNIVGIIAGTILL 361 Query: 355 KK 356 ++ Sbjct: 362 RR 363 >gi|127511873|ref|YP_001093070.1| permease YjgP/YjgQ family protein [Shewanella loihica PV-4] gi|126637168|gb|ABO22811.1| permease YjgP/YjgQ family protein [Shewanella loihica PV-4] Length = 370 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 60/365 (16%), Positives = 129/365 (35%), Gaps = 23/365 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R + ++ + L ++ I ++ + S ++++ + G +P + Sbjct: 2 IVFRYLIREVLKAQMAVLLVLLAIFISQHFVRVLADASDGEFPASLVMTLLGLNLPYLAV 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + M +E+++ + G S + + L LA+ +F + Sbjct: 62 LVVPLSLFLGILVAHGRMYAESEMVVFHSVGVSEWYVTRVTLLLAVANMLFTGFLVIYVT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI-----VD 177 P T ++ AQ + L + F + + + + Sbjct: 122 PWAEETQNRVLENAQSEAGLAALTQGRFQTSPNGRAVLFVERIGRDNQLDKVFVAQLPDP 181 Query: 178 SRDTQTHKIYYAQSGSIDLD---RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 I AQ GS+ D Q + LNDG ++ D +++F Y +Q + Sbjct: 182 EDGASQSNIVVAQGGSVIEDESGEQRLKLNDGIQYQSKQNQLDYQVVQFAGYEMQIKEQE 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 K + + LL+ +EFH RL L LI++ A Sbjct: 242 VDQRRRKLSALPIDQLLDTE----------GPEAVAEFHWRLAIPLAIPFMTLIAVPMA- 290 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ--NPYYIPILYLFLFCISSIFLL 352 + ++ K +F ++ + G F +E P Y+ + ++ + LL Sbjct: 291 --RVNVRQGKFAKMFPAILLYLGYFGLMIAGRKALEDEVIPAYLGMWWIHASALFLGMLL 348 Query: 353 MIKKK 357 + K++ Sbjct: 349 LSKER 353 >gi|320530395|ref|ZP_08031454.1| hypothetical protein HMPREF9555_01558 [Selenomonas artemidis F0399] gi|320137359|gb|EFW29282.1| hypothetical protein HMPREF9555_01558 [Selenomonas artemidis F0399] Length = 369 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 41/365 (11%), Positives = 123/365 (33%), Gaps = 12/365 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + YI R + SFL + + + + ++ SL ++KI + +P V Sbjct: 9 RILDKYIFREVFVSFLFAICAFSAVFIGSGTLFRIAQYITDYGASLPSVIKIFVFSLPGV 68 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + ++ +E+ + + G + + P + L ++S+ + Sbjct: 69 VMWTFPMSMLLASLLTFGKLSSASEITAMKSCGINFTRIAAPAVLLGFVVSVGAILFNEY 128 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD----DLYIKISKYNPNNTLQGIFIV 176 + P+ + + + + +E++ + + Y+ + Sbjct: 129 VVPRANTAYRNVIYYEIEGNSGMKSQEHVIIKEITDGQIRRLVYARAYDAEQQRLTNVSL 188 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + + I++ G+V+ M+F++ L + Sbjct: 189 QVFGDDGKVSHVENAEYAEWTGKEWIMHSGDVYDI-ADEHMERHMRFETQVLPVQKDPRQ 247 Query: 237 TIV-LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 I K+ ++ L + +E ++R++ + +IF LI + + Sbjct: 248 IIREQKSPEEMTMRELRRQIALMQTQYVNTNKLEAELYQRVSVPMASLIFTLIGVPLGIQ 307 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF-CISSIFLLMI 354 F I ++ + + + P+L +++ + I ++ Sbjct: 308 PTRNSSSAG----FAMSVIIIFFYYALMTMGNAFARGGVLPPMLAVWIPNIVGIIAGAIL 363 Query: 355 KKKYT 359 ++ + Sbjct: 364 FRRAS 368 >gi|186681603|ref|YP_001864799.1| permease YjgP/YjgQ family protein [Nostoc punctiforme PCC 73102] gi|186464055|gb|ACC79856.1| permease YjgP/YjgQ family protein [Nostoc punctiforme PCC 73102] Length = 391 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 47/358 (13%), Positives = 122/358 (34%), Gaps = 20/358 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQIL-QRINLVSSSTESLNILLKISGYLIPTV 60 + Y+ + F + I + + + S ++I +++ P Sbjct: 19 TIMDRYLTSELIAPFFFGVGAFSSLGVTIDAVFDLVRKIVESGLPIDIAIQVFLLKFPNF 78 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + T + ++ +EL+ + G S ++ + L+++++ F+ Sbjct: 79 IVLAFPMSTLLATLMTYSRLSSESELIALRGCGVSVYRIVLTAVMLSLVVTGMTFVFNEQ 138 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI------------KISKYNPNN 168 I P KA + ++ ++N+F+ D+ + Sbjct: 139 IAPAANYQAGVTLDKALKSDKPAFKQQNIFYPEYQDVIQPDGSKNRILTRLFYADQFDGK 198 Query: 169 TLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 + G+ I+D ++I ++S + + +G ++ + +I++F+ L Sbjct: 199 RMTGLTIIDRSTKNLNQIVVSESAQWNPSQNIWDFYNGTIYFVAADRSYRNIVRFEHQQL 258 Query: 229 QT--ESANSSTIVLKANDQNLSF-LLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIF 285 Q + + + N+S L + + ++++ V+F Sbjct: 259 QLPRTPLSLAEKSRDYGEMNISEALDQLQVEYLGGDRQKIRKLEVRIQQKISLPFVCVVF 318 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 GL+ + IS+ + F + F +I I Q P + +L Sbjct: 319 GLVGAAMGSIPQRTGRG---TSFGISVVVIFSYYLIF-FISGAIAQAGALSPFMGAWL 372 >gi|39997021|ref|NP_952972.1| hypothetical protein GSU1923 [Geobacter sulfurreducens PCA] gi|39983909|gb|AAR35299.1| membrane protein, putative [Geobacter sulfurreducens PCA] gi|298506038|gb|ADI84761.1| membrane protein, YjgQ-related [Geobacter sulfurreducens KN400] Length = 358 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 55/362 (15%), Positives = 118/362 (32%), Gaps = 9/362 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI + + V I VI L++I + +++ +P + Sbjct: 1 MTILTRYIAGAYLKILGLCLASFVAIYLVIDFLEKIGRLLRFQPRWIDIIQYFICKLPEI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P M T L ++RN+E++ + G + P++ +A +S+ S Sbjct: 61 ITQVIPLAVLMSTLLTLGMLSRNSEIVAMRGCGVGLGRISAPLIVIAAAVSLLTIFSNEF 120 Query: 121 IEPKCRSTIKQLSAK-AQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P ++ + + T ++ +N + D+ + ++P + Sbjct: 121 VLPSSYRQMRYVDQVLIRKQGTNTFFRQNNIWHKDESAIMMARVFDPGRQALRGITLWRF 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + D V + S + + L + + + Sbjct: 181 SDGMRPVSRIDAAEGTWDGARWTFKTVTVRGLAGPSVETRTLASLPAELNLKIEDLKVVD 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 A++ L Y ++ H +++ +I + I A + Sbjct: 241 KYADNMGFFKL-RDYVRKLKAGGYDTTRYEAQMHSKISLPFASLIMAFLGIPFALRGG-- 297 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF----LFCISSIFLLMIK 355 R I S+ I F F S +I Q P++ + LF +S I+L M Sbjct: 298 RSSGVALGITASIGIGFAYFITNSILIS-FGQTGILPPLISAWAANVLFALSGIWLAMTL 356 Query: 356 KK 357 + Sbjct: 357 DR 358 >gi|304437499|ref|ZP_07397457.1| permease YjgP/YjgQ family protein [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369549|gb|EFM23216.1| permease YjgP/YjgQ family protein [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 376 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 44/366 (12%), Positives = 126/366 (34%), Gaps = 12/366 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + YI R + SFL + + + + ++ SL ++KI + +P V Sbjct: 16 RILDKYIFREVFLSFLFAICAFSAVFIGSGTLFRIAQYITDYGASLPSVIKIFVFSLPGV 75 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + ++ ++E+ + + G + P + L L+S+ + Sbjct: 76 VMWTFPMSMLLASLLTFGRLSSSSEITAMKSCGIGFGRIAAPAILLGFLVSVGAILFNEH 135 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD----DLYIKISKYNPNNTLQGIFIV 176 + P+ + + + + +E++ + + + YN + Sbjct: 136 VVPRANTAYRNVIYYEIEGNSGMKSQEHVIIKEIEGGQIKRLVYARSYNAEQQQLTGVSL 195 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + I++ G+V+ M+F++ L E Sbjct: 196 QIFGADGKVSHVENAEYAEWTGSEWIMHKGDVYDI-ADEHLERRMRFETQVLPVEKDPRQ 254 Query: 237 TIV-LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 I K+ ++ L + +E ++R++ + +IF LI + + Sbjct: 255 IIREQKSPEEMTMRELRHQIALMQTQYVNTSKLEAELYQRVSVPMASLIFTLIGVPLGLQ 314 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF-CISSIFLLMI 354 F I +++ + + + P+L +++ + I +++ Sbjct: 315 PTRNSSSAG----FAMSVIIIFIYYALMTMGNAFARGEVLPPMLAVWIPNIVGIIAGIIL 370 Query: 355 KKKYTK 360 ++ ++ Sbjct: 371 LRRASR 376 >gi|238927586|ref|ZP_04659346.1| permease YjgP/YjgQ family protein [Selenomonas flueggei ATCC 43531] gi|238884511|gb|EEQ48149.1| permease YjgP/YjgQ family protein [Selenomonas flueggei ATCC 43531] Length = 379 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 39/362 (10%), Positives = 122/362 (33%), Gaps = 11/362 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + YI R + SFL + + + + ++ SL ++KI + +P V Sbjct: 19 RILDKYIFREVFLSFLFAICAFSAVFIGSGTLFRIAQYITDYGASLPSVIKIFVFSLPGV 78 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + ++ ++E+ + + G + P + L ++S+ + Sbjct: 79 VMWTFPMSMLLASLLTFGRLSSSSEITAMKSCGIGFGRIAAPAILLGFVVSVGAVLFNEH 138 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD----DLYIKISKYNPNNTLQGIFIV 176 + P+ + + + + +E++ + + + Y+ + Sbjct: 139 VVPRANTAYRNVIYYEIEGNSGMKSQEHVIIKEIEGGQIKRLVYARSYDAEQQHLTGVSL 198 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + I++ G+V+ + + + ++ Sbjct: 199 QIFGADGKVSHVENAEYAEWTGSEWIMHQGDVYDIADEHLERRMHFETQVLPVEKNPRQI 258 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 KA ++ L + +E ++R++ + +IF LI + + Sbjct: 259 IREQKAPEEMTMRELRHQITLMQTQYVNTNKLEAELYQRVSVPMASLIFTLIGVPLGLQP 318 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL--LMI 354 F I +++ + + + + P+ +++ I IF +++ Sbjct: 319 TRNSSSAG----FAMSVIIIFIYYALMTMGNALARGGVLPPMFAVWIPNIVGIFAGGILL 374 Query: 355 KK 356 ++ Sbjct: 375 RR 376 >gi|156975867|ref|YP_001446774.1| hypothetical protein VIBHAR_03633 [Vibrio harveyi ATCC BAA-1116] gi|156527461|gb|ABU72547.1| hypothetical protein VIBHAR_03633 [Vibrio harveyi ATCC BAA-1116] Length = 356 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 51/355 (14%), Positives = 120/355 (33%), Gaps = 2/355 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +LYI R I + + V ++ +I+ ++++ V L L IP + Sbjct: 3 KLLDLYIGRTIISTTALVLATFVGLSGIIKYVEQLRKVGRGAYDLMHALYFVLLSIPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++ + VL A+ L + + Sbjct: 63 EMFFPMAALLGALIGLGMLASSSELVVMQAAGFSKLDIGLSVLKTAVPLMLIVMTLGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + + L+ + D + +I I K + D Sbjct: 123 APEAQ-KMARDLRAFALSGGSIVSVRAGVWARDANDFIFIGKVEDDKLYGLNMWRFDEDK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + K+ +A+ D ++ ++ ++ + + + +K Sbjct: 182 KLDKVIFAEEVDYQQDNNWLMRYVQVTDMENENVITKRDVEQMEWHTSLAPDKLAVVTVK 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + +LS L + + + Y F ++L+Q L + L+++ Sbjct: 242 PEELSLSGLYD-YVSYLKATEQDASRYELAFWRKLSQPLSIAVMMLMALSFVFGPLRSVT 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + +F + F + + P L L ++ L+ +K Sbjct: 301 MGSRVLSGVVAGFTFYISSEFFGPLTLVYGIPPVFGALAPSLVFLAIAISLLRRK 355 >gi|325578599|ref|ZP_08148699.1| YjgP/YjgQ family membrane protein [Haemophilus parainfluenzae ATCC 33392] gi|301156461|emb|CBW15932.1| conserved inner membrane protein [Haemophilus parainfluenzae T3T1] gi|325159835|gb|EGC71965.1| YjgP/YjgQ family membrane protein [Haemophilus parainfluenzae ATCC 33392] Length = 359 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 41/357 (11%), Positives = 115/357 (32%), Gaps = 1/357 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + + YI + I + + +V ++ +I+ +++ V + + + +G IP Sbjct: 3 MNTLDRYIGKSILGAIFATLFTLVGLSAIIKFVEQFRSVGKGSYDIWQAVAYTGLTIPKD 62 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ +EL+++ + G SR + V+ A+ L +F I Sbjct: 63 VETFFPMAALLGALIALGNLASRSELVVMQSAGFSRFKIGLAVMKTALPLVLFTMIIGEW 122 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + + +A + ++ ++ + ++ + Sbjct: 123 GIPQTEQFARDMRTRALSGGSMLSVKNGVWAKDGNNFVYVRRITDDAQLEDIYIYTFDEQ 182 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + +A + L S + + + + L Sbjct: 183 RNLTHLKHANQAQYSAENNQWQLRQVNNSAVSKEQITTTNRLTEDWATSLTPDKLGAVSL 242 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + ++S L + + + +++ Q L + ++++ Sbjct: 243 RPTSLSISGLY-EYIAFLKQTGQDSRRFELTYWRKIFQPLSVGVMMMLALSFIFGSLRSV 301 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I F V + + P ++ L L ++ I+ L+ +K+ Sbjct: 302 TAGARIVTGICFGFLFYVVNEIFGQMSVVFNAPAFLGALMPSLLFMAIIWWLLARKR 358 >gi|308050967|ref|YP_003914533.1| permease YjgP/YjgQ family protein [Ferrimonas balearica DSM 9799] gi|307633157|gb|ADN77459.1| permease YjgP/YjgQ family protein [Ferrimonas balearica DSM 9799] Length = 354 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 41/355 (11%), Positives = 119/355 (33%), Gaps = 3/355 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + +LYI R I + + L + ++ +I+ + ++ LV + + +L+P + Sbjct: 3 RILDLYIARTIINTSALCLLVLTGLSGLIKFVDQLRLVGRGDFTTWDVALYVLFLVPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + + + ++EL+++ G SR+ + V+ A+ L I + + Sbjct: 63 EMFFPIAAMLGALIGMGMLASSSELVVMQAAGLSRLNIAASVMKTAVPLMIIAMLIGEYV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + + + D +L++ I++ TL+G+ I Sbjct: 123 AP-VSEQTAREMRAQKTSGGSLISSSTGTWAKDGELFVNITEVQDARTLKGVTIYRFDGD 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + + + +L D + + + +K Sbjct: 182 NLLREITFAEQGLYDGKAWRLL-DVTETDLTDEQVSTLDRDELRWPSSLTPEKLQVVTVK 240 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 ++ L++ + + Y +++ Q + + ++++ Sbjct: 241 PEGLSIEGLID-YVDYLKANRQDTTRYELALWRKVAQPITVGVMMMLALSFIFGPLRTVT 299 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + SF + + + P ++ + + + F L+ ++ Sbjct: 300 MGARVLLGVITGFSFYIANEIFGPMSLVMGLPTFLGAMLPSILFAIAAFALLQRR 354 >gi|298492659|ref|YP_003722836.1| permease YjgP/YjgQ family protein ['Nostoc azollae' 0708] gi|298234577|gb|ADI65713.1| permease YjgP/YjgQ family protein ['Nostoc azollae' 0708] Length = 391 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 54/376 (14%), Positives = 130/376 (34%), Gaps = 20/376 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQ-ILQRINLVSSSTESLNILLKISGYLIPTV 60 + Y+ + FL + I + + + V S +NI LK+ +P V Sbjct: 19 SIMDRYLAMQLLPLFLFGVGAFTSVVLAIDSLFELLRKVVESGLPINIALKVFILKLPYV 78 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + T + ++ +EL+ + G S ++ + L+ L++ +I Sbjct: 79 MVYSFPMSTLLATLMTYSRLSSESELIALRGCGVSVYRMVLTAVLLSSLVTAMTYIFNEQ 138 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL------------YIKISKYNPNN 168 I P + +A + S+ + N+++ ++ + + Sbjct: 139 IAPAANYEATRTLEQALKSDKPSFKQHNIYYPEYREVKEKDGSTTKILSRLFYADQFDGK 198 Query: 169 TLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 +QG+ I+D ++I ++S + ++ +G ++ +P +I++F+ L Sbjct: 199 QMQGLTIIDRSREGLNQILVSESAQWNASQKVWNFYNGTIYLVAPDRSYRNILRFEHQQL 258 Query: 229 QT--ESANSSTIVLKANDQNLSF-LLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIF 285 Q N + + N+S L P+ + +++ +IF Sbjct: 259 QLPRTPLNLAENSRDYGEMNISQALQQLEVERLAGNPQKIRKLEVRIQQKIAFPFVCIIF 318 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLF 344 GL+ + IS+ + F + S + + I +L Sbjct: 319 GLVGSAMGTIPQRTGRG---TSFGISVIVIFSYYLLLSVSGALAQADILSPLIGAWLPNS 375 Query: 345 CISSIFLLMIKKKYTK 360 L ++ + + Sbjct: 376 FGLVTGLFLLMRVAQR 391 >gi|163750106|ref|ZP_02157349.1| hypothetical protein KT99_20601 [Shewanella benthica KT99] gi|161330163|gb|EDQ01145.1| hypothetical protein KT99_20601 [Shewanella benthica KT99] Length = 364 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 58/360 (16%), Positives = 132/360 (36%), Gaps = 23/360 (6%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 ++R + ++ + ++ I ++ + S ++++ + G +P + +V P Sbjct: 1 MIREVFKAQIAVLAVLLAIFISQHFVRVLADASDGEFPASLVMTLLGLNLPYLAVLVIPL 60 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 + M ++E++I+ G S + + L LA+ IF I + P Sbjct: 61 SLFLGILMAHGRMYADSEMVILHGVGVSEWYITRVTLLLAVGNMIFTGILSVYVTPWAEE 120 Query: 128 TIKQLSAKAQLAL-TFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 Q+ AQ + + + + + + NN L +F+ D Sbjct: 121 KQNQVLEHAQSEAGLAAITQGRFQTSPNGRAVLFVERIGRNNELYKVFVAQLPDPDDESG 180 Query: 187 YYA-------QSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + Q + L+DG ++ +P D I++F SY +Q + Sbjct: 181 ISNIVVAQGGKVIEDETGGQRLQLSDGVQYQATPKKVDFQIIEFGSYQMQIKEQPVDERR 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 K + ++ L++ +EFH RL L + LI++ A + Sbjct: 241 RKLSAMPINELMDIE----------GPAATAEFHWRLAIPLAIPLMTLIAVPMA---RVN 287 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMIKKK 357 ++ K +F ++ + G F + P Y+ + ++ + LL+ K++ Sbjct: 288 VRQGKFAKMFPAVLLYLGYFCLMIAGRKALEDGVIPEYLGMWWIHASALCMGILLLGKER 347 >gi|194334630|ref|YP_002016490.1| permease YjgP/YjgQ family protein [Prosthecochloris aestuarii DSM 271] gi|194312448|gb|ACF46843.1| permease YjgP/YjgQ family protein [Prosthecochloris aestuarii DSM 271] Length = 387 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 55/358 (15%), Positives = 123/358 (34%), Gaps = 9/358 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K + YI R G + + + L + + V+ +++ I+ ++ + + +P V Sbjct: 28 LKRIDTYIARQFGLTCIFASLSFLALFVVLDLIENIDRFIDNSVDIQHISLYYLSFLPEV 87 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 TP + + V ++ ++EL I + G S ++ P F+++++++F ++ Sbjct: 88 FLATTPIAVLLSSLYVTGRLSSSSELSAIFSAGLSLRRIMLPFAFVSLVITVFNIVNAGW 147 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P+ + + + E+ L+ I NT Q I Sbjct: 148 ILPETTAYKNTFMREFLGKNSEHLFPESRIHILESRDRILSIGKLEPNTGQAEKITLETF 207 Query: 181 TQTH--KIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK-FKSYTLQTESANSST 237 + + A+ + + D I+ P + + L +++ Sbjct: 208 DGSTITQRIDAEKMNYNADLDRWIMTGTRNRTFLPDTTLYRYDPGNDTLKLSLTASSLKE 267 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L+ + N+ + L+T E H R+ + +I LI + Sbjct: 268 LHLRPEEMNIVQHYRYIEEKKDAGFSNLQTAIIELHSRIALPITSLIIILIGVPL---ST 324 Query: 298 LVRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 ++ IS+ I F I + +P L +F I L Sbjct: 325 RKKRSGLAIEAGISILIGFLYISLEKTIHAIGNGGMADPVLTAWLPNIIFLGVGIVLY 382 >gi|87124323|ref|ZP_01080172.1| possible permease [Synechococcus sp. RS9917] gi|86167895|gb|EAQ69153.1| possible permease [Synechococcus sp. RS9917] Length = 388 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 52/375 (13%), Positives = 134/375 (35%), Gaps = 21/375 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQ-ILQRINLVSSSTESLNILLKISGYLIPTVL 61 + ++L + L + ++ + + + + + S + I +++ +P+ L Sbjct: 18 LLDRWLLGELIGPLLFAIAAFTVVSLSVGVMFELVRRIVESGLPVGIAVQVLLLRLPSFL 77 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P M T + ++ N+EL + + G S +I P L LA++++ F+ ++I Sbjct: 78 VISFPMATLMATLLAYSRLSANSELTALRSVGISATRMIAPALALALVMTGLTFVFNDVI 137 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI------------KISKYNPNNT 169 P+ + + +A + N+ + L +K Sbjct: 138 VPRTSLSAEITLQRALGRSVSTEKGNNIIYSRFGRLVAGDGESETGLAQLFYAKKFNEGV 197 Query: 170 LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ 229 + G+ ++D ++ A + DG++ SP ++ F Y Sbjct: 198 MSGVTVLDFSRLGFTQMLVADEARWNERESKWEFLDGQILTLSPSGS-VTSADFDRYLYP 256 Query: 230 TESANSST--IVLKANDQNLSFLLNPNPN-NPNYRPELLETYRSEFHKRLTQWLFPVIFG 286 +A + AN+ ++ + + + R ++ T + ++FG Sbjct: 257 LSAAPIRIAKLPKDANNMTVAEAIEAERMLDEAGDRKEARRMRVRIQEKFTLPMACLVFG 316 Query: 287 LISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF-LFC 345 LI K + + IS+ + V++ S+ + P++ + Sbjct: 317 LIGSSLGAKP--NGRTSRSQGFGISVVL-ILVYYVLSFSFSSLGVKGTLPPVVAAWAPVL 373 Query: 346 ISSIFLLMIKKKYTK 360 IS ++ ++ ++ Sbjct: 374 ISLAGGGLLLRQASR 388 >gi|294102483|ref|YP_003554341.1| permease YjgP/YjgQ family protein [Aminobacterium colombiense DSM 12261] gi|293617463|gb|ADE57617.1| permease YjgP/YjgQ family protein [Aminobacterium colombiense DSM 12261] Length = 365 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 54/356 (15%), Positives = 128/356 (35%), Gaps = 13/356 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRI-NLVSSSTESLNILLKISGYLIPTVL 61 + +I + + SF+ + + +L +I +++ S+ ++L++ Y +P V+ Sbjct: 6 ILDRFIWKEMAGSFVFGVMAFTMVFVAGDLLFQIASMIIEKGISIGVVLRLFIYSLPEVI 65 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + ++ N+E++ + +G S ++KPV+ ++L+ + I + Sbjct: 66 ILTLPMACLLSALLTFGKLSTNSEIVALKASGISFQRILKPVIVGSLLVGLSALILNETV 125 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD----LYIKISKYNPNNTLQGIFIVD 177 P + L + S L+E +F R + + I I K P +V Sbjct: 126 VPFSNRAAENLMRFEVMREKPSVLKEQVFLRDESNGQLNRVIYIEKLQPRKGTMTNVLVQ 185 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT--ESANS 235 + K + D + I +DGEV + + K + +F+ Sbjct: 186 EFEKGKLKRITVGKTGLWKDGKWWI-DDGEVFQVTNGGKVELLFRFERQQFDLNLSPQQV 244 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 K ++ + L+ + L FH R V+ ++ Sbjct: 245 EQASRKPSEMSALELM-AQIRLLQAQGGNLAPLWVLFHLRFAVPWASVVLAILGASLGV- 302 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + +S+ I F V++ + + + P+L ++ + + + Sbjct: 303 --RSHRTGSGVGFGLSVMIVF-VYYVVMSLCKAFGETEHMPPLLAAWVPNVLFLLV 355 >gi|269963273|ref|ZP_06177605.1| Predicted permease [Vibrio harveyi 1DA3] gi|269831988|gb|EEZ86115.1| Predicted permease [Vibrio harveyi 1DA3] Length = 356 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 51/355 (14%), Positives = 118/355 (33%), Gaps = 2/355 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +LYI R I + + V ++ +I+ ++++ V L L IP + Sbjct: 3 KLLDLYIGRTIISTTALVLATFVGLSGIIKYVEQLRKVGRGAYDLMHALYFVLLSIPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++ + VL A+ L + + Sbjct: 63 EMFFPMAALLGALIGLGMLASSSELVVMQAAGFSKLDIGLSVLKTAVPLMLIVMTLGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + + L+ + D + +I I K + D Sbjct: 123 APEAQ-KMARDLRAFALSGGSIVSVRAGVWARDANDFIFIGKVEDDKLYGLNMWRFDEDK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 K+ +A+ D ++ ++ ++ + + + +K Sbjct: 182 NLDKVIFAEEVDYQQDNNWLMRYVQITDMENENVITKRDLEQMEWHTSLAPDKLAVVTVK 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + +LS L + + Y F ++L+Q L + L+++ Sbjct: 242 PEELSLSGLYD-YVTYLKASEQDASRYELAFWRKLSQPLSIAVMMLMALSFVFGPLRSVT 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + +F + F + + P L L ++ L+ +K Sbjct: 301 MGARVLSGVVAGFTFYISSEFFGPLTLVYGIPPVFGALAPSLVFLAIAVSLLRRK 355 >gi|117921443|ref|YP_870635.1| permease YjgP/YjgQ family protein [Shewanella sp. ANA-3] gi|117613775|gb|ABK49229.1| permease YjgP/YjgQ family protein [Shewanella sp. ANA-3] Length = 352 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 44/355 (12%), Positives = 117/355 (32%), Gaps = 3/355 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK +LYI R + + + L + ++ +I+ + ++ LV + ++ +L+P Sbjct: 1 MKILDLYIARVLLSTSALCLLVLTGLSGIIKWVDQLRLVGRGSYTMMDAGIYVLFLVPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + + N+EL+++ +G SR+ + + A+ L + + Sbjct: 61 IEMFFPMAVLLGALIGMGMLASNSELVVMQASGMSRLQITLSAMKTAVPLMLMVMALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P +L+ + D DL++ I + + L I + Sbjct: 121 GAPVAEQK-ANELQAIKLSGGSLIKSHRGIWAKDGDLFVNIGEVADIDKLNNITLYKFNS 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ ++ D + S + + + S + + Sbjct: 180 ELKLTNVVHAKSALFSKDSWHLM-DVKRTDLSYDEVKLEHLDEDIWRSSLTPDKLSVVSV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K ++ L+ + + Y +++ Q + + L+++ Sbjct: 239 KPEALSIRGLM-GYLDYLKNNSQDPSRYELALWRKVMQPVTVGVMMLVALSFVFGPLRTV 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + SF + + + + P Y+ + L F + + Sbjct: 298 TMGARVLLGVVAGFSFYISNEIFGPMSMVYELPAYVGAIAPSLLFTGIAFYFIRR 352 >gi|24372948|ref|NP_716990.1| hypothetical protein SO_1370 [Shewanella oneidensis MR-1] gi|24347091|gb|AAN54435.1|AE015581_2 conserved hypothetical protein [Shewanella oneidensis MR-1] Length = 352 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 47/355 (13%), Positives = 118/355 (33%), Gaps = 3/355 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK +LYI R + + + L + ++ +I+ + ++ LV T ++ +L+P Sbjct: 1 MKILDLYIARVLLSTSALCLLVLTGLSGIIKWVDQLRLVGRGTYTMMDAGIYVLFLVPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + + N+EL+++ +G SR+ + + A+ L + + Sbjct: 61 IEMFFPMAVLLGALIGMGMLASNSELVVMQASGMSRLQITLSAMKTAVPLMLMVMALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P +L+ + D DL++ I + + L I + Sbjct: 121 GAPIAEQK-ANELQAIKLSGGSLIKSHRGIWAKDGDLFVNIGEVADIDKLNNITLYKFNS 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ + +L D + S + + + S + + Sbjct: 180 ELKLTNVVHAESALFSKD-SWLLTDVKRTDLSYDEVKLEHLDEDVWRSSLTPDKLSVVSV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K ++ L+ N + Y +++ Q + + L+++ Sbjct: 239 KPEALSIRGLM-GYLEYLNSNSQDPSRYELALWRKVMQPVTVGVMMLVALSFVFGPLRTV 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + SF + + + + P Y+ + L F + + Sbjct: 298 TMGARVLLGVVAGFSFYISNEIFGPMSIVYELPAYVGAMAPSLLFTGVAFYFIRR 352 >gi|153001631|ref|YP_001367312.1| permease YjgP/YjgQ family protein [Shewanella baltica OS185] gi|151366249|gb|ABS09249.1| permease YjgP/YjgQ family protein [Shewanella baltica OS185] Length = 370 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 63/371 (16%), Positives = 139/371 (37%), Gaps = 25/371 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R + ++ + L ++ I ++ + S ++++ + G +P ++ Sbjct: 2 IVFKYLIREVLKAQIAVLLVLLTIFISQHFVRILADASDGDFPASLIMTLIGLNLPYLVI 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + M E++++ G S + + L LA++ +F + Sbjct: 62 LVLPLSLFLGILLAHGRMYSENEMVVLHGVGVSEWYVTRVTLILAVINMLFTGYLSLYVA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-----D 177 P Q+ KAQ + L + F + + + + V Sbjct: 122 PWAEEQQNQVLEKAQSEAGLAALVQGRFQASPNGRAVLFVERIGKDNELDKVFVAQLPDP 181 Query: 178 SRDTQTHKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 +T + A+ G + D Q + LNDG ++ SP +KD +++F Y +Q + Sbjct: 182 DDETGVTNVVVAKGGRVQEDSTGAQQLNLNDGVRYQGSPKAKDYQMIEFGGYKMQIKEQQ 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 K + + L+ +EFH RL L I LI++ A Sbjct: 242 VDERRRKLSALPVDELV----------KIEGAEAVAEFHWRLAIPLAIPIMTLIAVPLA- 290 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLL 352 + ++ K +F ++ + G F + P Y+ + ++ + + LL Sbjct: 291 --RVNVRQGKFAKMFPAVLLYLGYFGLMVAGRKALQDGIIPLYLGMWWIHISALLMGLLL 348 Query: 353 MIKKK--YTKI 361 + K + +++I Sbjct: 349 LGKDRPIFSRI 359 >gi|119471263|ref|ZP_01613766.1| hypothetical protein ATW7_11365 [Alteromonadales bacterium TW-7] gi|119445729|gb|EAW27012.1| hypothetical protein ATW7_11365 [Alteromonadales bacterium TW-7] Length = 370 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 47/365 (12%), Positives = 126/365 (34%), Gaps = 23/365 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + +S + L ++ I +++ + S + ++L + +P + Sbjct: 2 LIFRYLTAEVLKSQVAVFLTLMTIFLSQKLVVILGDASEGSIPAQLVLSMIALKLPQLAS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + + ++E+ ++ G S +++ L + L++ + Sbjct: 62 LILPLSIFLGIILAYSRIYADSEMTVLKACGVSEWYVVRVTLISSAGLALLAGALTMYLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P QL +A+ S L F ++ + N + + ++ Sbjct: 122 PWASEQEYQLKEQAKADAGLSALRAGRFQETGNEKAVVFIHNIENGGKELNKVFVAQLPN 181 Query: 183 THKIYYAQ--------SGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + A+ Q ++L DG+ + + +++ +F Y++Q Sbjct: 182 SDNDELARLVYAEQGVVIEAQNGEQQLVLTDGKRYETDATTPALNLTEFDGYSVQIREQE 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 K + LL +++ R+ L + L+++ Sbjct: 242 IEHQRRKLEAVPTNQLL----------AINTPESIAQWQWRIAIPLSIPLLTLLAVPL-- 289 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLL 352 + ++ K + ++S+ G F + I + P I + ++ L + LL Sbjct: 290 -SVVNPRQGKFAKLVPAISLYLGYFILLNAAKFAIEDGKIPPSIGLWWIHLSALFIGGLL 348 Query: 353 MIKKK 357 +IK + Sbjct: 349 IIKGR 353 >gi|113971160|ref|YP_734953.1| permease YjgP/YjgQ family protein [Shewanella sp. MR-4] gi|113885844|gb|ABI39896.1| permease YjgP/YjgQ family protein [Shewanella sp. MR-4] Length = 352 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 45/355 (12%), Positives = 117/355 (32%), Gaps = 3/355 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK +LYI R + + + L + ++ +I+ + ++ LV + S+ +L+P Sbjct: 1 MKILDLYIARVLLSTSALCLLVLTGLSGIIKWVDQLRLVGRGSYSMMDAGIYVLFLVPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + + N+EL+++ +G SR+ + + A+ L + + Sbjct: 61 IEMFFPMAVLLGALIGMGMLASNSELVVMQASGMSRLQITLSAMKTAVPLMLMVMALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P +L+ + D DL++ I + + L I + Sbjct: 121 GAPVAEQK-ANELQAIKLSGGSLIKSHRGIWAKDGDLFVNIGEVADIDKLNNITLYKFNS 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ ++ D + S + + + S + + Sbjct: 180 ELKLTNVVHAKSALFSKDSWHLM-DVKRTDLSYEEVKLEHLDEDIWRSSLTPDKLSVVSV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K ++ L+ + + Y +++ Q + + L+++ Sbjct: 239 KPEALSIRGLM-GYLDYLKNNSQDPSRYELALWRKVMQPVTVGVMMLVALSFVFGPLRTV 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + SF + + + + P Y+ + L F + + Sbjct: 298 TMGARVLLGVVAGFSFYISNEIFGPMSMVYELPAYVGAIAPSLLFTGIAFYFIRR 352 >gi|284929475|ref|YP_003421997.1| putative permease [cyanobacterium UCYN-A] gi|284809919|gb|ADB95616.1| predicted permease [cyanobacterium UCYN-A] Length = 382 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 43/363 (11%), Positives = 123/363 (33%), Gaps = 20/363 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPT 59 + + Y+ + FL + + + + V+ S L + +I IP Sbjct: 8 LSVVDRYLFLELLSPFLFGMGIFTSLGLSIGTLFDLVRRVTESGLVLTVAFQILLLKIPG 67 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 L + P + + ++ ++E++ + + G L+ PV+ +++ F+ + Sbjct: 68 FLSLAFPMAILLAALMAYSRLSSDSEIIALRSLGVGIYRLVIPVVIFGFIVTGCAFVVND 127 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL------------YIKISKYNPN 167 I P + +A + N+ + + + ++ Sbjct: 128 WIAPAATHKAAIILEEAVSQKRPDFKRHNIVYPEYKTVKGKNGQESTMLTRLFHAEEYNG 187 Query: 168 NTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 ++G+ I+D ++I ++S + ++ +G ++ +P +I++F+ Sbjct: 188 EEMKGLTILDRTQEGVNQIVTSESATWNISSNTWDFFNGTIYLIAPDGSYRNIVRFQHQQ 247 Query: 228 LQTE--SANSSTIVLKANDQNLSFLLNPNPN-NPNYRPELLETYRSEFHKRLTQWLFPVI 284 L + + + +S + + + + ++ +I Sbjct: 248 LALPRAPLDLADRRQNFTEMTISETREYLKAVQFSGNEKRIRKVKVRLQEKYAMPFVCLI 307 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 FGL+ K + + + + FG ++ +++ + P L +L Sbjct: 308 FGLVGASIGVKPQNTNR---ATSFGVCVGLIFG-YYILAFMSTSLGIWGILTPFLGAWLP 363 Query: 345 CIS 347 I Sbjct: 364 NIV 366 >gi|220916596|ref|YP_002491900.1| permease YjgP/YjgQ family protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219954450|gb|ACL64834.1| permease YjgP/YjgQ family protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 371 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 57/369 (15%), Positives = 133/369 (36%), Gaps = 17/369 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+ R I F + LF+ I QIL + +++ S SL + + L+P + Sbjct: 1 MGLIDRYLAREILLPFAAALLFLTQILLATQILGQADVLFGSGVSLVDVGLVMLSLMPHL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V P F + + + + E++ + G S + L++ L L ++++ Sbjct: 61 LGYVIPVAFLLGVVLGVGRLAEDREVVALGAAGLSPVRLVRVPLLLGLVVAALGAWLSLS 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP + + + + F+ I + + + I D + Sbjct: 121 VEPASIRAARLRLNEVVKRNVTNDVRGGTFYDQIPGYTIYA-ERARGGRWENVLIQDRSN 179 Query: 181 TQTHKIYYAQSGSIDL----DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT---ESA 233 + + G ++ ++L GEVHR+ + D + F + + Sbjct: 180 PDAPMLALSHRGRLEPVGAGQDMRLVLEQGEVHREEVGTADYASAAFGKAEILVGLGTAL 239 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSE--FHKRLTQWLFPVIFGLISIV 291 + ++ K++ + L + +++E R E H++L+ L V F L+ + Sbjct: 240 SDRNVLAKSSREATVSDLRARAAAAREKGDVVEARRQEGYLHRKLSAPLVVVAFALLGVP 299 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFW---GFSYIIHKIEQNPYYIPILYLFLFCISS 348 R+ + + + + + G + + L + + Sbjct: 300 LG----AERRGGRAFGMGATFLLVVVHYLLLRGGEVLTQLGHLPAAFALQLPNLVLGAAG 355 Query: 349 IFLLMIKKK 357 I L+++ + Sbjct: 356 IGLVLLMAR 364 >gi|116624897|ref|YP_827053.1| permease YjgP/YjgQ family protein [Candidatus Solibacter usitatus Ellin6076] gi|116228059|gb|ABJ86768.1| permease YjgP/YjgQ family protein [Candidatus Solibacter usitatus Ellin6076] Length = 777 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 56/367 (15%), Positives = 124/367 (33%), Gaps = 17/367 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + YIL ++ V + + + IN + + SL I+ K +L P ++ Sbjct: 414 LVDTYILSNFVTYLVLMLASFVSLELIRNFFELINDMLRNNISLKIMFKYLFFLSPQLIY 473 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + M++ E+ G S L P+L ++LLS LF + Sbjct: 474 QMLPVSILVAVLAAFGVMSKQNEITAFKACGVSLFRLAAPILVGSVLLSGGLFAFDFYYV 533 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI-------FI 175 L + + T +YL + +++ D + +N+ + F Sbjct: 534 ANANRIQDALRDQIKGRATQTYLRPDRTWKMGYDSLRIFNYRYFDNSGEESTMSEASVFE 593 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 ++ + + + +A+ + + + DG + D + + Sbjct: 594 LEPKTFRLQRQIFARQAHWNASLKTWVFEDGWTCEYKGPNCDAYARFQATTFRELTEPPD 653 Query: 236 STIV--LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + K N L + + E + F+++ + LF +I LI++ Sbjct: 654 YFLKEARKDEQMNFLQLDSYIKDLTQSGFEGTSKLQVRFYRKFSLPLFALIMALIAVPFG 713 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF----LFCISSI 349 R + I IS+ I+ + + K+ P + +F ++ Sbjct: 714 FLVG---SRGAMTGIGISIGIAVA-YIALGQLFEKVGDVNLLSPATAAWAPDVVFALAGT 769 Query: 350 FLLMIKK 356 +L + K Sbjct: 770 YLFLRMK 776 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 54/376 (14%), Positives = 124/376 (32%), Gaps = 29/376 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVS-SSTESLNILLKISGYLIPT 59 M+ YI R I S ++ L FI ++ + L+ SS+ + N++L++ IP Sbjct: 1 MRLLGRYIFREILTSAVLGTLLASFILFLRSVDPIFELLVKSSSANTNLVLQLFALAIPN 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 VLP PF + L + + E++ + G S +I PVL A L + Sbjct: 61 VLPFTIPFGVLVGILIGLGRLASDGEIIAMRAAGVSSRKVIFPVLLFAALGGGVAAFATL 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP--NNTLQGIFIVD 177 + P + + + + + +F + + + + P + + +F+ D Sbjct: 121 RLTPYSIHKYTDIVNQLEATQLTADVPSRVFVENFPNTILYVGEVKPGNPSVWKNVFVAD 180 Query: 178 SRDTQTHKIYYAQSGS---------------IDLDRQAIILNDGEVHRKSPISKDISIMK 222 + + +R + L + H S + Sbjct: 181 VAPPEKRSAGMRDKAMGPMITVAEQAIAVPDVTNNRLQLTLRNYSTHEMSKDLSSRDTIA 240 Query: 223 FKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFP 282 + ++ S L++ LL Y+ E HKR + Sbjct: 241 -PTGQQALTASPPSQTPLRSIGMGTRQLLAYP-----RGKPDWVEYQIELHKRFALPVAC 294 Query: 283 VIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIE--QNPYYIPILY 340 ++ ++ I R+ + ++ ++F ++ + + + L+ Sbjct: 295 IMLAMVGIPLGIA---TRKGGRSAGYVNAIFVAFFCYYMGFVSLIGLARQKTLPVPVALW 351 Query: 341 LFLFCISSIFLLMIKK 356 L + ++ + + Sbjct: 352 LPNAVFFVVGVIFLAR 367 >gi|282901534|ref|ZP_06309456.1| permease YjgP/YjgQ [Cylindrospermopsis raciborskii CS-505] gi|281193577|gb|EFA68552.1| permease YjgP/YjgQ [Cylindrospermopsis raciborskii CS-505] Length = 388 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 52/370 (14%), Positives = 130/370 (35%), Gaps = 18/370 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQ-ILQRINLVSSSTESLNILLKISGYLIPTV 60 + Y+ + FL + I + + + V S +NI LK+ +P V Sbjct: 16 SIMDRYLAMQLLPIFLFGVGAFTSVVLAIDSLFELLRKVVESGLPINIALKVFVLKLPYV 75 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + T + ++ ++EL+ + G S ++ + L+ L++ +I Sbjct: 76 MVYSFPMSTLLATLMTYSKLSSDSELIALRGCGVSVYRIVLTAVLLSGLVTGMTYIFNEY 135 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI------------KISKYNPNN 168 I P +A + S+ ++N+++ + + Sbjct: 136 ISPAANYEASVTLERALKSDQPSFKQQNIYYPEYREEKTKDGGSSRLLARLFYADEFDGK 195 Query: 169 TLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 ++G+ I+D ++I ++S + +Q +G ++ +P +I++F+ L Sbjct: 196 KMKGLTIIDRSQAGVNQIVVSESAQWNAYKQVWDFYNGTIYLVAPDRSYRNILRFEHQQL 255 Query: 229 QTESANSSTIVL--KANDQNLSF-LLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIF 285 Q S + N++ L P+ ++ +++ +IF Sbjct: 256 QLPSTPLIVAKNSRDYEEMNIAQSLQQLEIEKLAGNPQRIKKLEVRIQQKIAFPFICIIF 315 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC 345 GL+ + + I + I + + + +P+ +L C Sbjct: 316 GLVGSAMGTIPQRTGRGRSFGVSIIVIFIYYLLLSVCGALAQAEILSPFVGA--WLPNLC 373 Query: 346 ISSIFLLMIK 355 + +L++ Sbjct: 374 GLGMGILILM 383 >gi|268317250|ref|YP_003290969.1| permease YjgP/YjgQ family protein [Rhodothermus marinus DSM 4252] gi|262334784|gb|ACY48581.1| permease YjgP/YjgQ family protein [Rhodothermus marinus DSM 4252] Length = 361 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 49/362 (13%), Positives = 127/362 (35%), Gaps = 10/362 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 M + +I+R + +L ++ V+ ++ I+ S+ + L IP Sbjct: 1 MTLIDRHIVRRLLLGYLFFTGALIVFFIVLHYVEYIDDFMDRGASMREVFLVYYPSYIPE 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ + +P + V M + E++ + +G S L++P + LA++++ F+F Sbjct: 61 IVRLTSPLALFLACLYVTGRMAQGLEIVALQMSGVSLYRLLRPCVALALIVTGFMFWFNG 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P T+ K + +L + ++ + Y+ + + Sbjct: 121 WVVPVTNRTVVAFDEKYLSKTPRQFDLSHLHRQARPGQFLSVGYYDRERRIAYRIALQQF 180 Query: 180 DTQTHKIYYAQSGSIDLDR--QAIILNDGEVHRKSPISKDIS-IMKFKSYTLQTESANSS 236 Y + ++ + QA ++ +G P +++ ++ + L + + Sbjct: 181 AEGRRLAYRLDAPRMEWNDSLQAWVVPEGIARHFEPDGREVRRPVRRQQLDLPLYPRDLA 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L L ++ + +I LI + A Sbjct: 241 RTEREVEAMTLPDAAAHLAALRRSGAGHLGRPLVAYYSKFAYPFANLILVLIGVPLA--- 297 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMI 354 ++ R+ + I I L ++F + +I P+L +L + L+++ Sbjct: 298 SVRRRGGQAVQIGIGLGVAFA-YLALQKLIEPFGYTETLPPLLVAWLPHLVFLAGALVLV 356 Query: 355 KK 356 + Sbjct: 357 AR 358 >gi|109899861|ref|YP_663116.1| permease YjgP/YjgQ [Pseudoalteromonas atlantica T6c] gi|109702142|gb|ABG42062.1| permease YjgP/YjgQ [Pseudoalteromonas atlantica T6c] Length = 353 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 48/355 (13%), Positives = 130/355 (36%), Gaps = 4/355 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R + + MS +V ++ +I+ ++++ V + + + +P L Sbjct: 3 KILDWYIARTLLSTTAMSLGVLVGLSALIKFIEQMKSVGRGSYDMTVAAVYVFLSLPREL 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + + + N+EL+++ + G SR +I + AIL+ +F+ + + Sbjct: 63 EQFFPMATLIGGLIGMGILASNSELVVMQSAGQSRWNIIISAMKSAILMVLFVMVIGEWV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + K++ +A + + ++ + D+ I + +TL+ + I + + Sbjct: 123 APVSETKAKEIRTQAISGGSLFSSDRLVWAKDGDNFVS-IGEVVDKDTLRDVSIYEFDNE 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + + D+ L+ + S + ++ + +K Sbjct: 182 LYLRQITTAESATYQDKTWE-LSHVQSTEFSDNRIQVQDAADGAWASSLTPDKLGVVTVK 240 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 ++ L++ N + E YR +++ Q + + L+++ Sbjct: 241 PEALSIRGLID-YVNYLENNSQNSERYRLALWRKVLQPISVGVMLLMALSFIFGPLRSVT 299 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + F V + + P +I + L + I + ++++ Sbjct: 300 MGARVIMGVLTGFGFFVSNEVFGSLSTVYHIPPFIGAI-LPSVVFTGISIHLLRR 353 >gi|261364966|ref|ZP_05977849.1| permease, YjgP/YjgQ family [Neisseria mucosa ATCC 25996] gi|288566764|gb|EFC88324.1| permease, YjgP/YjgQ family [Neisseria mucosa ATCC 25996] Length = 356 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 40/360 (11%), Positives = 123/360 (34%), Gaps = 4/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +I+ + + + + + + +P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEIINEVGDLGKGSYNGATMAQYVLMQMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + +EL +I +G S L+ + ++ ++ Sbjct: 61 AYELMPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLVLSQFGLIFALATAALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + + + A + + + + I + + P++TL GI I + D Sbjct: 121 IAPVLSQKAENIKSTAINGKISTGN--TGLWLKEKNSIINVREMLPDHTLLGIKIWERND 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ + + L + S ++S +++ + + +++ Sbjct: 179 KNELTQATEAESAVLNNDGSWQLKNIRRSTLSEDKVEVSTAAEENWPIAVKRNLMDVLLV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K + ++ L ++ + + Y + ++L + + L++ + Sbjct: 239 KPDQMSVGELT-TYISHLENNNQNTQIYAIAWWRKLVYPVAAWVMALVAFAFTPQTTRHG 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 I L + F ++ P ++ L + + + +I+++ + Sbjct: 298 NMGLKLFGGICLGLLFHFAGRLFGFTSQLYGVPPFLAG-ALPTIAFALLAVWLIRRQERR 356 >gi|86158887|ref|YP_465672.1| permease YjgP/YjgQ [Anaeromyxobacter dehalogenans 2CP-C] gi|85775398|gb|ABC82235.1| permease YjgP/YjgQ [Anaeromyxobacter dehalogenans 2CP-C] Length = 371 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 57/369 (15%), Positives = 133/369 (36%), Gaps = 17/369 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+ R I F + LF+ I QIL + +++ S SL + + L+P + Sbjct: 1 MGLIDRYLAREILLPFAAALLFLTQILLATQILGQADVLFGSGVSLVDVGLVMLSLMPHL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V P F + + + + E++ + G S + L++ L L ++++ Sbjct: 61 LGYVIPVAFLLGVVLGVGRLAEDREVVALGAAGLSPVRLVRVPLLLGLVVAALGAWLSLS 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP + + + F+ I + + + I D + Sbjct: 121 VEPASIRAARLRLNDVVKRNVTNDVRGGTFYDQIPGYTIYT-ERARGGRWENVLIQDRSN 179 Query: 181 TQTHKIYYAQSGSIDL----DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT---ESA 233 + ++ G ++ ++L GEVHR+ + D + F L + Sbjct: 180 PDAPMLALSRRGRLEPVGAGQDMRLVLEQGEVHREEVGTADYASAAFGKAELLVGLGTAL 239 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSE--FHKRLTQWLFPVIFGLISIV 291 + ++ K++ + L + +++E R E H++L+ L V F L+ + Sbjct: 240 SDRNVLAKSSREATVSDLRARAAAAREKGDVVEERRQEGYLHRKLSAPLVVVAFALLGVP 299 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFW---GFSYIIHKIEQNPYYIPILYLFLFCISS 348 R+ + + + + + G + + L + + Sbjct: 300 LG----AERRGGRAFGMGATFLLVVVHYLLLRGGEVLTQLGHLPAAFALQLPNLVLGAAG 355 Query: 349 IFLLMIKKK 357 + L+++ + Sbjct: 356 VALVLLMAR 364 >gi|332307892|ref|YP_004435743.1| permease YjgP/YjgQ family protein [Glaciecola agarilytica 4H-3-7+YE-5] gi|332175221|gb|AEE24475.1| permease YjgP/YjgQ family protein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 368 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 48/367 (13%), Positives = 125/367 (34%), Gaps = 24/367 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ +S L ++ I + ++ ++ S+ +++L +P + Sbjct: 2 LIFRYLVKETVKSQTAVFLVLMAIFITNKFVRVLSEASNGDIPASLVLGFLALSMPVLAS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + ++E+ ++ G S + + +L LA+++++ + Sbjct: 62 LILPLSLFLGIMLAHGRLYVDSEMTVMRACGISEWYVTRVMLVLAVIMALITGAMTLWVA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD----LYIKISKYNPNNTLQGIFIVDS 178 P QL +A + L F + ++ +I + + D+ Sbjct: 122 PMSVEREYQLEEQAGADTGLTTLIPGRFQQTANEKAVIFVHEIGNDSEPLKRVFMAQHDT 181 Query: 179 RDTQTHKIYYAQSG----SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + + + ++L DG + + KD +++F Y +Q Sbjct: 182 TTDSQNVHLVYAKQGGLRELPDGSETLVLGDGIQYEGTLGEKDYRVVEFGEYQIQIAEQE 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + K + + L N + +E R L +I++ Sbjct: 242 AEQKRRKLSAYTTAQLFNDPSIDA----------IAELQWRFAIPLSLFFLVIIAVPL-- 289 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI--LYLFLFCISSIFLL 352 A ++ + +F +L + ++ K+ ++ P+ L+ I I L Sbjct: 290 -SAADPRQGRFGKMFPALMLY-LGYFLLLLAGRKVLEDGKIPPMLGLWWVHAVIGVIGLA 347 Query: 353 MIKKKYT 359 +I K Sbjct: 348 LIFKGRP 354 >gi|220932585|ref|YP_002509493.1| permease YjgP/YjgQ family protein [Halothermothrix orenii H 168] gi|219993895|gb|ACL70498.1| permease YjgP/YjgQ family protein [Halothermothrix orenii H 168] Length = 365 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 46/366 (12%), Positives = 117/366 (31%), Gaps = 14/366 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPT 59 MK Y+ R + FL I IL + + ++ L+++ +P Sbjct: 1 MKIIYRYLTRELIMPFLFGVAAFTAIFIGTDILFTLTRLYNNFGVEFTTLVQLFFLKLPP 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ + P M T ++ + E+ G S ++ P L + +++S+ + Sbjct: 61 IIVLTFPMATLMGTLMSFGRLSGDGEITAFRAGGVSVYKIVIPSLLVGLIMSVTTIMVNE 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEE-----NLFFRLDDDLYIKISKYNPNNTLQGIF 174 ++ P+ Q+ + + + L + YI + T Sbjct: 121 MVVPRANYLYDQIVWEIKNGRKMPATQYDLTLTPLDRKYRRPDYILYTHRFNGETGIMND 180 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL--QTES 232 + + + ++ +G ++ + + +KF Y + + Sbjct: 181 VYLQDYEKGVPVTLIKARKAVWQGDKWHFYNGNIYYF-KEGERVPALKFNEYVIKQPIYT 239 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + K + L + + R ++H+++ IF L++ Sbjct: 240 PRRIGKMNKDIEDMSFKELGEYIQFLEEQGKDTFEERVKYHQKIAIPFASFIFALLAAPL 299 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--FCISSIF 350 K R + +S+ + F +++ + + + P +L F + Sbjct: 300 GIKPR--RSGGTATGMGLSIIVIF-IYYTIMTLGSALGERGTISPFFGAWLQNFIFLIVG 356 Query: 351 LLMIKK 356 MI + Sbjct: 357 GYMIYR 362 >gi|28899416|ref|NP_799021.1| putative permease [Vibrio parahaemolyticus RIMD 2210633] gi|153839669|ref|ZP_01992336.1| permease YjgP/YjgQ family protein [Vibrio parahaemolyticus AQ3810] gi|260363480|ref|ZP_05776316.1| conserved inner membrane protein [Vibrio parahaemolyticus K5030] gi|260879349|ref|ZP_05891704.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034] gi|260895692|ref|ZP_05904188.1| conserved inner membrane protein [Vibrio parahaemolyticus Peru-466] gi|260900264|ref|ZP_05908659.1| conserved inner membrane protein [Vibrio parahaemolyticus AQ4037] gi|28807652|dbj|BAC60905.1| putative permease [Vibrio parahaemolyticus RIMD 2210633] gi|149746812|gb|EDM57800.1| permease YjgP/YjgQ family protein [Vibrio parahaemolyticus AQ3810] gi|308087431|gb|EFO37126.1| conserved inner membrane protein [Vibrio parahaemolyticus Peru-466] gi|308093069|gb|EFO42764.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034] gi|308107540|gb|EFO45080.1| conserved inner membrane protein [Vibrio parahaemolyticus AQ4037] gi|308112550|gb|EFO50090.1| conserved inner membrane protein [Vibrio parahaemolyticus K5030] gi|328471447|gb|EGF42342.1| lipopolysaccharide ABC transporter permease [Vibrio parahaemolyticus 10329] Length = 356 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 52/355 (14%), Positives = 118/355 (33%), Gaps = 2/355 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +LYI R I + + V ++ +I+ ++++ V L L +P + Sbjct: 3 KILDLYIGRTIISTTALVLATFVGLSGIIKYVEQLRKVGRGVYDLTHALYFVLLSVPRDV 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++ + VL A+ L + + Sbjct: 63 EMFFPMAALLGALIGLGMLASSSELVVMQAAGFSKLDIGLSVLKTAVPLMLIVMTLGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + + L+ + D + +I I K + D Sbjct: 123 APEAQ-KMARDLRSFALSGGSIVSVRAGVWARDANDFIFIGKVEDDKLYALNMWRFDDDK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 K+ +A+ D ++ + + + M + + + +K Sbjct: 182 NLEKVIFAEEVDYQQDNNWLMRDVQITNMQDENVISKQEMDQMEWHTSLAPDKLAVVTVK 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + +LS L + + Y F ++LTQ L + L+++ Sbjct: 242 PEELSLSGLYD-YVTYLKASEQDASRYELAFWRKLTQPLSIAVMMLMALSFVFGPLRSVT 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + +F + F + + P L L ++ L+ +K Sbjct: 301 MGARVLSGVVAGFTFYISSEFFGPLTLVYGIPPIFGALAPSLAFLAIAVALLRRK 355 >gi|291532164|emb|CBL05277.1| Predicted permeases [Megamonas hypermegale ART12/1] Length = 361 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 52/364 (14%), Positives = 125/364 (34%), Gaps = 14/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPT 59 M+ + YIL+ +F+ + +L+ ++ S + ++++ Y +P Sbjct: 1 MRILDKYILKETIMTFIFGICAFSAVFLGSGTLLRIAQYITQYGASFSAIVRLIIYSLPG 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ P + ++ N+E++ + G S L+ PV+ ++ +SIF Sbjct: 61 IIVWTFPMSMLLAALLTFGRLSGNSEIIAMKACGVSFKRLVTPVIAFSLGVSIFSIGFNE 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIK---ISKYNPNNTLQGIFIV 176 + P L T +E++ + D I+ ++ T + Sbjct: 121 YVVPASNQAYADLVRYEIQGNTSPESQEHIIIKQIQDGNIQRLVYARKYDAETGNLDNLS 180 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 Q + + ++ +G ++ S + + +MKF S L Sbjct: 181 IQEFEQGKMVRVENAEYAKWSVDEWVMYNGVLYDLSQPNTE-RMMKFDSQVLPINQTPKQ 239 Query: 237 TI--VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 I K ++ + L N + + E ++R T + ++F LI Sbjct: 240 IIKSQKKPDEMTIKEL-REQINIMKSQYVDTKKLEIELYQRFTVPMASLMFALIGAPLGI 298 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--FCISSIFLL 352 + I +++ + I QN + P++ +++ + Sbjct: 299 QPNRSSSSIGFGISII----IIFIYYTLMTLAGAIGQNSFIPPVIAVWIPNIVTLIAGIY 354 Query: 353 MIKK 356 +I+K Sbjct: 355 LIRK 358 >gi|217077925|ref|YP_002335643.1| putative permease, YjgP/YjgQ family [Thermosipho africanus TCF52B] gi|217037780|gb|ACJ76302.1| putative permease, YjgP/YjgQ family [Thermosipho africanus TCF52B] Length = 1110 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 57/354 (16%), Positives = 118/354 (33%), Gaps = 5/354 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YIL+ FLM + A V + Q +++ + L ++ Y +P Sbjct: 1 MKVLTKYILKLSLGPFLMGIGAFIVFASVELLYQLSDIIVRHRVGILKLFELIYYNLPYF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P VL+ + + E+ G L+ P L L+I+ F + Sbjct: 61 ASLGIPVGILFSIFWVLSQLYSSKEITAFLVHGIPSRKLVYPFLILSIIFGAVSFYLNDQ 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I PK + +K ++EN+ ++D+ Y + +Y+ + ++ Sbjct: 121 IVPKFNQKAMETISKYVYKKPEVTIKENVLTKIDESQYFFVKRYDQQQGILYDVVLFQNM 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSSTI 238 +I A+ ++ + + L +G+++ + F L + + + Sbjct: 181 QSEERIITAKK--VEKEENSWYLINGKMYVTDRDGFMKLDLSFSKIKLDLKDDLESLMRV 238 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 D L+ + E H R + P I ++ + + L Sbjct: 239 GKSPRDMTGEELIQKIKTFKKL-GVDPSPWIVELHGRYANSVGPFIIVILGVPLSLLFGL 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 + + F+ + + G S + + NP LF I L Sbjct: 298 KSKSWSVIFTFVIVVLYQGSGAWLSAMGKENLINPVLAAWYPDLLFAIVGFILF 351 >gi|113474402|ref|YP_720463.1| permease YjgP/YjgQ [Trichodesmium erythraeum IMS101] gi|110165450|gb|ABG49990.1| permease YjgP/YjgQ [Trichodesmium erythraeum IMS101] Length = 392 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 58/373 (15%), Positives = 136/373 (36%), Gaps = 21/373 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + YI+ + FL + V + + + V+ S ++I +++ +P Sbjct: 20 SVMDRYIIAELIGPFLFGVGLFSSLGITVGAMFELVRKVTESGLPISIAIQVFLLKMPEF 79 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + T V + M+ ++E++ + + G S +I P + L++ ++ F I Sbjct: 80 IGLAFPMAMILTTLMVYSQMSGHSEIVALRSCGISIYRMIIPTIILSLTVTTLSFALNEI 139 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI------------KISKYNPNN 168 I P + K + EEN+F+ + ++ Sbjct: 140 IVPSANYQASLILEKTLEQENPPFKEENIFYPEFGKVKQPDGSQDDTLTRLFYAEKFDGK 199 Query: 169 TLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 +QG+ I+D +I ++S + + L +G ++ SP +I+KF L Sbjct: 200 YMQGVTILDRSQYGVDQIVSSESATWNSAENIWDLFNGTIYLVSPDGSYRNIVKFDHKKL 259 Query: 229 QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETY---RSEFHKRLTQWLFPVIF 285 + +A + + ++ + + ++L ++ Sbjct: 260 KLSTAPLDLAGKRRTYKQMNISQSYEYLELMRLSGNYRKVVKTQVRIQQKLALPFVCLVM 319 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFL 343 GL+ + R+ + IS+ I F ++ S+I + Q P L +L Sbjct: 320 GLVGAALGIRP--QRKANRGTSFGISVIIIFA-YYLLSFITGAMGQKEILTPFLAGWLPN 376 Query: 344 FCISSIFLLMIKK 356 F + + ++ + Sbjct: 377 FLGLGVAVFLLAR 389 >gi|160902798|ref|YP_001568379.1| permease YjgP/YjgQ family protein [Petrotoga mobilis SJ95] gi|160360442|gb|ABX32056.1| permease YjgP/YjgQ family protein [Petrotoga mobilis SJ95] Length = 1153 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 57/355 (16%), Positives = 124/355 (34%), Gaps = 3/355 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+ + F M + + + + Q ++ + + LL + Y +P Sbjct: 1 MKKLFKYVSKEFIPPFFMGLIAFIVFVSLELLYQLSEIIVRNNVGFSKLLILIWYHLPYF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P V++ ++ E++ + G LI P + +++LLS F F N Sbjct: 61 ISMGIPVGVLFGIFWVISKLSSANEIIALQTLGIPMKKLIIPFMTISLLLSFFTFALFNT 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P K+ A + +EEN F + D Y+ + + + + + ++ Sbjct: 121 IVPVSNYKAKEAMALYVYQRPQAQIEENQFVDVGDGRYLFVKQIDRESGILYDVLLYEVK 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ AQ + +G + R + + F L + + Sbjct: 181 NDYTAVFNAQQAQ--KGPDGWYMKNGRMFRTNEDGFLDLDITFDQLQLDIQEDVEEFLNF 238 Query: 241 -KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 K+ ++ S L + + + + L P++ ++ I + L Sbjct: 239 SKSANEMTSKELKEKITTFSKLGLDVSGLIVSYQSKFANSLAPLVICILGIALSLFLNLT 298 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + + F+ + I G S + + NP + +F I FL ++ Sbjct: 299 SKSWSVITTFVLVIIYQGSGAWLSALGKEHIINPTISVWIPNIIFGIIGTFLFLM 353 >gi|254432417|ref|ZP_05046120.1| unclassified ABC-type transport system permease [Cyanobium sp. PCC 7001] gi|197626870|gb|EDY39429.1| unclassified ABC-type transport system permease [Cyanobium sp. PCC 7001] Length = 386 Score = 120 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 47/376 (12%), Positives = 130/376 (34%), Gaps = 21/376 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + ++L + + ++ V + + + V+ S L++ L++ +P+ L Sbjct: 14 LLDRWMLGELIGPLVFGVAAFTAVSLSVGAVFELVRRVAESGLPLDVALQVLLLELPSFL 73 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P M T + ++ N+EL + + G ++ P + LA+ +++ F + Sbjct: 74 VLSFPMATLMATLLTYSKLSGNSELTALRSVGVPTWRMLVPAVVLAVAMTMLTFGFNEAV 133 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL------------YIKISKYNPNNT 169 P S + ++A +N+ + + +I ++ Sbjct: 134 VPSTLSQAEATLSRAIGRAVAGEQRDNVVYSKYGRVELPDGSTERGLTHIFYAQRFNKGV 193 Query: 170 LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTL 228 ++ + ++D + + A DG+V S S+ I+ +F Y Sbjct: 194 MEDVTLLDLSRSAHRVMLTADRARWSSRDAQWEFLDGQVVGIGSSGSEAITSARFDRYLY 253 Query: 229 QTESANSS--TIVLKANDQNLSFLLNPNPNNPNYRP-ELLETYRSEFHKRLTQWLFPVIF 285 + + AN+ ++ R ++ + ++F Sbjct: 254 PLGNQPLKVAKLPKDANEMSIGQARTAERLLRESGDLRAARKLRVRIQEKFSFPAVCLVF 313 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC 345 GLI + R R + + + L ++ ++ + P+L ++ Sbjct: 314 GLIGSSLGARPHSRRSRSQGFGLTVLLIFG---YYLVAFSFSSLGVKGTLTPLLSAWMPV 370 Query: 346 ISSIF-LLMIKKKYTK 360 + + L++ ++ ++ Sbjct: 371 LIGLGTGLVLVRQASR 386 >gi|307154796|ref|YP_003890180.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 7822] gi|306985024|gb|ADN16905.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 7822] Length = 388 Score = 120 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 56/365 (15%), Positives = 131/365 (35%), Gaps = 20/365 (5%) Query: 5 ELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + Y+ + FL + + + + V+ S S++I L+I +P + + Sbjct: 20 DSYVFMELFIPFLFGMGLFTSLGIAIGTLFDIVRKVTESGLSISIALQILMLKMPEFVVL 79 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + T + + ++EL+ + G S L+ P L L+++++ F + + P Sbjct: 80 AFPMSILLATLMGYSRLASDSELIAFRSIGISPYRLLVPSLILSLMVTGTTFFFSDYVAP 139 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI------------KISKYNPNNTLQ 171 + K + A A +E+N+ + + ++ +Q Sbjct: 140 QATQQAKSILADALKQDKPLQVEDNIIYPEYKKITQDNGRDQTILTRLFYAEKFDGQQMQ 199 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 G+ I+D ++I +QS ++D+ + +G ++ +P +I++F+ L Sbjct: 200 GLTILDRSQPGVNQIVTSQSAIWNVDQNSWDFYNGTIYLIAPDGSYRNIVRFEHQQLDLP 259 Query: 232 SANSSTIVLK--ANDQNLSFLLNPNPN-NPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 A K D +++ + + ++ ++FGLI Sbjct: 260 RAPLDIAKRKQNPADMSIAEAKEYLKIVKLSKNDQRARKVEVRIQEKYALPFVCIVFGLI 319 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 K K + + + F ++ S+I + P + +L I Sbjct: 320 GSAIGLKPQNT---NKATSFGVCIVLIFS-YYLLSFITSSMGIWGIVTPTVSAWLPNILG 375 Query: 349 IFLLM 353 + M Sbjct: 376 LLAAM 380 >gi|197121803|ref|YP_002133754.1| permease YjgP/YjgQ family protein [Anaeromyxobacter sp. K] gi|196171652|gb|ACG72625.1| permease YjgP/YjgQ family protein [Anaeromyxobacter sp. K] Length = 371 Score = 120 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 57/369 (15%), Positives = 133/369 (36%), Gaps = 17/369 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+ R I F + LF+ I QIL + +++ S SL + + L+P + Sbjct: 1 MGLIDRYLAREILLPFAAALLFLTQILLATQILGQADVLFGSGVSLVDVGLVMLSLMPHL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V P F + + + + E++ + G S + L++ L L ++++ Sbjct: 61 LGYVIPVAFLLGVVLGVGRLAEDREVVALGAAGLSPVRLVRVPLLLGLVVAALGAWLSLS 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP + + + + F+ I + + + I D + Sbjct: 121 VEPASIRAARLRLNEVVKRNVTNDVRGGTFYDQIPGYTIYA-ERARGGRWENVLIQDRSN 179 Query: 181 TQTHKIYYAQSGSIDL----DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT---ESA 233 + ++ G ++ ++L GEVHR+ + D + F L + Sbjct: 180 PDAPMLALSRHGRLEPVGAGQDMRLVLEQGEVHREEVGTADYASAAFGKAELLVGLGTAL 239 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSE--FHKRLTQWLFPVIFGLISIV 291 + ++ K++ + L + +++E R E H++L+ L V F L+ + Sbjct: 240 SDRNVLAKSSREATVSDLRARAAAAREKGDVVEARRQEGYLHRKLSAPLVVVAFALLGVP 299 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFW---GFSYIIHKIEQNPYYIPILYLFLFCISS 348 R+ + + + + + G + + L + Sbjct: 300 LG----AERRGGRAFGMGATFLLVVVHYLLLRGGEVLTQLGHLPAAFALQLPNLVLGAVG 355 Query: 349 IFLLMIKKK 357 + L+++ + Sbjct: 356 VGLVLLMAR 364 >gi|332307891|ref|YP_004435742.1| permease YjgP/YjgQ family protein [Glaciecola agarilytica 4H-3-7+YE-5] gi|332175220|gb|AEE24474.1| permease YjgP/YjgQ family protein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 353 Score = 120 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 47/355 (13%), Positives = 130/355 (36%), Gaps = 4/355 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R + + MS +V ++ +I+ ++++ V + + + +P L Sbjct: 3 KILDWYIARTLLSTTAMSLGVLVGLSALIKFIEQMKSVGRGSYDMTVAAVYVFLSLPREL 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + + + N+EL+++ + G SR +I + AIL+ +F+ + + Sbjct: 63 EQFFPMATLIGGLIGMGILASNSELVVMQSAGQSRWNIIISAMKSAILMVLFVMVIGEWV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + K++ +A + + ++ + D+ I + N L+ + I + + Sbjct: 123 APISETKAKEIRTQAISGGSLFSSDRLVWAKDGDNFVS-IGEVVDKNNLRDVSIYEFDND 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + + + + L+ + S + +++ + +K Sbjct: 182 LYLRKITTAEAA-NYQSDSWELSHVQSTEFSDNRIHVEDAADGAWSSSLTPDKLGVVTVK 240 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 ++ L++ N + E YR +++ Q + + L+++ Sbjct: 241 PEALSIRGLID-YVNYLENNSQNSERYRLALWRKVLQPISVGVMLLMALSFIFGPLRSVT 299 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + F V + + P +I + L + I + ++++ Sbjct: 300 MGARVIMGVLTGFGFFVSNEVFGSLSTVYHIPPFIGAI-LPSIVFTGISIHLLRR 353 >gi|126175308|ref|YP_001051457.1| permease YjgP/YjgQ family protein [Shewanella baltica OS155] gi|153001630|ref|YP_001367311.1| permease YjgP/YjgQ family protein [Shewanella baltica OS185] gi|217972441|ref|YP_002357192.1| permease YjgP/YjgQ family protein [Shewanella baltica OS223] gi|125998513|gb|ABN62588.1| permease YjgP/YjgQ family protein [Shewanella baltica OS155] gi|151366248|gb|ABS09248.1| permease YjgP/YjgQ family protein [Shewanella baltica OS185] gi|217497576|gb|ACK45769.1| permease YjgP/YjgQ family protein [Shewanella baltica OS223] Length = 352 Score = 120 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 48/355 (13%), Positives = 118/355 (33%), Gaps = 3/355 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK +LYI R + + + L + ++ +I+ + ++ LV T S+ +L+P Sbjct: 1 MKILDLYIARVLLSTSALCLLVLTGLSGIIKWVDQLRLVGRGTYSMMDAGIYVLFLVPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + + N+EL+++ +G SR+ + + A+ L + + + Sbjct: 61 IEMFFPMAVLLGALIGMGMLASNSELVVMQASGMSRLQITMSAMKTAVPLMLLVMVLGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P +L+ + D DL++ I + N L I + Sbjct: 121 GAPIAEQK-ANELQAIKLSGGSLIKSHRGIWAKDGDLFVNIGEVENINKLNNITLYKFNS 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ L D + S + ++ + S + + Sbjct: 180 ELKLTNVVHADRAVFSQD-RWRLFDVKRTDLSYEKVVLEYLEEDQWQSSLTPDKLSVVSI 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K ++ L+ + + Y +++ Q + + L+++ Sbjct: 239 KPEALSIRGLV-GYLDYLKTNSQDPSRYELALWRKVMQPVTVAVMMLVALSFVFGPLRTV 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + SF + + + + P Y+ + L F + + Sbjct: 298 TMGARVLLGVVAGFSFYISNEIFGPMSIVYELPAYVGAVAPSLLFTGVAFYFIRR 352 >gi|315125734|ref|YP_004067737.1| hypothetical protein PSM_A0636 [Pseudoalteromonas sp. SM9913] gi|315014248|gb|ADT67586.1| hypothetical protein PSM_A0636 [Pseudoalteromonas sp. SM9913] Length = 355 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 54/356 (15%), Positives = 127/356 (35%), Gaps = 3/356 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ + Y+ R I ++ + + +V I+ +I+ ++++ V + + + + Y IP Sbjct: 2 MKTLDWYLGRSILQTTGFALMVLVGISTLIKFIEQLKSVGRGSYDIMTAMLYTIYSIPDD 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L ++ N+EL+++ G SR+ +I V+ AI +++ + Sbjct: 62 LVVFFPMAALIGGLTGLGALASNSELVVMQAAGMSRLQIIGSVMKTAIFMALCVMALGEW 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + + + + + + D + +I I + N L+G+ + Sbjct: 122 GAPAAQL-HAKEMRNQAIHGGDVFNAQKGVWAKDANNFINIEDVDQNGMLRGVNMYHFDK 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + ++ D +L D S + + Y Q + + + Sbjct: 181 SLSLTQITKAKEAVGRD-SGWLLRDVNKVMISEELITTEQVSEEFYPSQLTAEKLGVVSV 239 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K + S L + TY ++L Q + + L+++ Sbjct: 240 KPESLSFSGL-WSYLAYLQQNEQDTSTYDLALWRKLMQPVSIAVMLLVALSFIFGPLRTV 298 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + I F + + + Q P I + + LM K+ Sbjct: 299 TMGARIIMGVVTGIVFHLTNEIFGPVVMVYQIPAIIGAVLPSILFTGFAAYLMNKR 354 >gi|295132762|ref|YP_003583438.1| permease [Zunongwangia profunda SM-A87] gi|294980777|gb|ADF51242.1| predicted permease [Zunongwangia profunda SM-A87] Length = 358 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 53/361 (14%), Positives = 124/361 (34%), Gaps = 7/361 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL+ +F M L + I + + ++I+ + + + + Sbjct: 1 MKILDWYILKRYLGTFSMMLLLFIPIGITVNLAEKIDKILENEVPFVEVAEYYLNFTIYF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + + + NTE++ ++G S ++P + A ++ I Sbjct: 61 ANLLFPLFLFLSIIWFTSKLANNTEVIAFLSSGVSFYRFLRPYIIGATIVCIAALGLSMF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF-IVDSR 179 + PK + + + ++++ +++D+ I S + P F I Sbjct: 121 LAPKASKGFNEFKYEYLKRGHETQETKDVYRQVNDNEVIYASHFRPKTHTANNFVIEHFE 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 Q A + + L + + +S L E + Sbjct: 181 GNQLKFKISASRLKFNTEDSTYTLTNVDKRIIGENGDIMSNQAKLDTILPFEFDELTPET 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 A + S L + Y +KR++ + I +I++ ++ Sbjct: 241 YIAETLSFSELNEFIKKESRRGSGNMNMYLVAAYKRVSIPVSAFILTIIAVAV---SSMK 297 Query: 300 RQRKKIHPIFISLSISFGVFW---GFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R+ + + +S++F + F I + +P + F I ++FLL+ K Sbjct: 298 RRGGMGVNLAVGISLAFIFIFFDKVFGTIAEQSTFSPLLAVWIPNISFGILAVFLLLKAK 357 Query: 357 K 357 + Sbjct: 358 R 358 >gi|304410147|ref|ZP_07391766.1| permease YjgP/YjgQ family protein [Shewanella baltica OS183] gi|307302142|ref|ZP_07581900.1| permease YjgP/YjgQ family protein [Shewanella baltica BA175] gi|304351556|gb|EFM15955.1| permease YjgP/YjgQ family protein [Shewanella baltica OS183] gi|306914180|gb|EFN44601.1| permease YjgP/YjgQ family protein [Shewanella baltica BA175] Length = 352 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 47/355 (13%), Positives = 118/355 (33%), Gaps = 3/355 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK +LYI R + + + L + ++ +I+ + ++ LV T S+ +L+P Sbjct: 1 MKILDLYIARVLLSTSALCLLVLTGLSGIIKWVDQLRLVGRGTYSMMDAGIYVLFLVPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + + N+EL+++ +G SR+ + + A+ L + + + Sbjct: 61 IEMFFPMAVLLGALIGMGMLASNSELVVMQASGMSRLQITMSAMKTAVPLMLLVMVLGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P +L+ + D DL++ I + + L I + Sbjct: 121 GAPIAEQK-ANELQAIKLSGGSLIKSHRGIWAKDGDLFVNIGEVENISKLNNITLYKFNS 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ L D + S + ++ + S + + Sbjct: 180 ELKLTNVVHADRAVFSQD-RWRLFDVKRTDLSYEKVVLEYLEEDQWQSSLTPDKLSVVSI 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K ++ L+ + + Y +++ Q + + L+++ Sbjct: 239 KPEALSIRGLV-GYLDYLKTNSQDPSRYELALWRKVMQPVTVAVMMLVALSFVFGPLRTV 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + SF + + + + P Y+ + L F + + Sbjct: 298 TMGARVLLGVVAGFSFYISNEIFGPMSIVYELPAYVGAVAPSLLFTGVAFYFIRR 352 >gi|323436074|ref|ZP_01050240.2| predicted permease YjgP/YjgQ family [Dokdonia donghaensis MED134] gi|321496389|gb|EAQ39255.2| predicted permease YjgP/YjgQ family [Dokdonia donghaensis MED134] Length = 358 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 48/362 (13%), Positives = 124/362 (34%), Gaps = 9/362 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI++ +F+ + + I ++ + ++I+ + ++ + Sbjct: 1 MKILDWYIVKRYIGTFVTMLVLFIPIGIIVNLAEKIDKILANEVPFGEVALYYLNFTIYF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + + + NTE++ ++G S ++P L A ++ F+ Sbjct: 61 ANLLFPLFLFLSVIWFTSKLANNTEVIAFLSSGVSFTRFLRPYLIGATVVCAGAFVMGTY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ + + +++ ++D YI S +NP F + + Sbjct: 121 LAPRANKGYNEFIFEYLKKKKNDRDTRDVYRQIDAGDYIYASSFNPRTKRGRNFTWEHFE 180 Query: 181 TQTHKIYYAQS-GSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + + + L + + T + + + + Sbjct: 181 GNKMTYKMSATQIRFNEEDTTYTLYGFKKRIIGEDGDVLIKQAKIDTTFAFDIDDLTPVE 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 A N L + Y KR + + I +I++ A+ Sbjct: 241 YIAETLNTPELREFIAKEKARGSSYISRYEVTLQKRYSLPVAAYILTIIAVAV---SAMK 297 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF----LFCISSIFLLMIK 355 R+ + + ++F VF F + + + + P++ ++ LF I + +LL Sbjct: 298 RRGGMGINLAFGIVLAF-VFIFFDKVFGTLAEQSDFPPLVAVWTPNILFAILAAYLLQNA 356 Query: 356 KK 357 K+ Sbjct: 357 KR 358 >gi|160876366|ref|YP_001555682.1| permease YjgP/YjgQ family protein [Shewanella baltica OS195] gi|160861888|gb|ABX50422.1| permease YjgP/YjgQ family protein [Shewanella baltica OS195] gi|315268556|gb|ADT95409.1| permease YjgP/YjgQ family protein [Shewanella baltica OS678] Length = 352 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 48/355 (13%), Positives = 118/355 (33%), Gaps = 3/355 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK +LYI R + + + L + ++ +I+ + ++ LV T S+ +L+P Sbjct: 1 MKILDLYIARVLLSTSALCLLVLTGLSGIIKWVDQLRLVGRGTYSMMDAGIYVLFLVPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + + N+EL+++ +G SR+ + + A+ L + + + Sbjct: 61 IEMFFPMAVLLGALIGMGMLASNSELVVMQASGMSRLQITMSAMKTAVPLMLLVMVLGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P +L+ + D DL++ I + N L I + Sbjct: 121 GAPIAEQK-ANELQAIKLSGGSLIKSHRGIWAKDGDLFVNIGEVENINKLNNITLYKFNS 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ L D + S + ++ + S + + Sbjct: 180 ELKLTNVVHADRAVFSQD-RWRLFDVKSTDLSYEKVVLEYLEEDQWQSSLTPDKLSVVSI 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K ++ L+ + + Y +++ Q + + L+++ Sbjct: 239 KPEALSIRGLV-GYLDYLKTNSQDPSRYELALWRKVMQPVTVAVMMLVALSFVFGPLRTV 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + SF + + + + P Y+ + L F + + Sbjct: 298 TMGARVLLGVVAGFSFYISNEIFGPMSIVYELPAYVGAVAPSLLFTGVAFYFIRR 352 >gi|254229297|ref|ZP_04922715.1| putative permease, YjgP/YjgQ family [Vibrio sp. Ex25] gi|262393203|ref|YP_003285057.1| hypothetical protein VEA_002430 [Vibrio sp. Ex25] gi|151938221|gb|EDN57061.1| putative permease, YjgP/YjgQ family [Vibrio sp. Ex25] gi|262336797|gb|ACY50592.1| putative membrane protein [Vibrio sp. Ex25] Length = 356 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 50/355 (14%), Positives = 119/355 (33%), Gaps = 2/355 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +LYI R I + + V ++ +I+ ++++ V L L +P + Sbjct: 3 KILDLYIGRTIISTTALVLATFVGLSGIIKYVEQLRKVGRGVYDLTHALYFVLLSVPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++ + VL A+ L + + Sbjct: 63 EMFFPMAALLGALIGLGMLASSSELVVMQAAGFSKLDIGLSVLKTAVPLMLIVMTLGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + + ++ + + D + +I I K + D Sbjct: 123 APEAQ-KMARDLRSFAISGGSIVSVRSGVWARDANDFIFIGKVEDDKLYALNMWRFDDDK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 K+ +A+ D ++ + K+ ++ + + + +K Sbjct: 182 NLQKVIFAEEVDYQQDNNWLMRDVQITDMKNENVISKQDIEQMEWHTSLAPDKLAVVTVK 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + +LS L + + Y F ++LTQ L + L+++ Sbjct: 242 PEELSLSGLYD-YVTYLKASEQDASRYELAFWRKLTQPLSIAVMMLMALSFVFGPLRSVT 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + +F + F + + L L ++ L+ +K Sbjct: 301 MGARVLSGVVAGFTFYISSEFFGPLSLVYGISPVFGALAPSLVFLAIAIALLRRK 355 >gi|78486088|ref|YP_392013.1| permease YjgP/YjgQ [Thiomicrospira crunogena XCL-2] gi|78364374|gb|ABB42339.1| YjgP/YjgQ family protein [Thiomicrospira crunogena XCL-2] Length = 369 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 41/356 (11%), Positives = 121/356 (33%), Gaps = 16/356 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + Y+ + + +F ++ I + + + + + +++++ Y IP Sbjct: 1 MRILDKYLYKELFATFFAVLSVLLLITFGTEATKLLAVAVEGAIPSTVIMQVLLYKIPPA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + + + ++ E++++ + G + K V + + L+ + Sbjct: 61 LEVILPLVALLSVMLAVGRLYQDQEMVVLQSCGIATSFFQKRVFWFLVPLAFLTAWVSLV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P ++L +AQ + L F L + I ++ +N V Sbjct: 121 VTPWSYEQERKLIMEAQTTSPLAALVPGKFNPLPNGEGIFYTRSIKSNGDLESVWVRLNT 180 Query: 181 TQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + A G + ++L +G + D ++ +F + S++ Sbjct: 181 DERDILLMAPKGKFEWINGKLVLVLLNGRSYEGLKKGDDFTVREFDRFEGFLPEIQSTST 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + + S L + + + R+ ++ GL+ + Sbjct: 241 AQQVFEIPTSTLWQSDK----------PEHEALLQWRIVTPFSILVLGLLGL---KMSKS 287 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + + +F +L + ++ + N P + L+ + + + Sbjct: 288 GPREGRFAKVFFALVLYV-IYNQLLVTFRESISNEALSPWVGLWPIPVVFLMYALY 342 >gi|114562104|ref|YP_749617.1| permease YjgP/YjgQ family protein [Shewanella frigidimarina NCIMB 400] gi|114333397|gb|ABI70779.1| permease YjgP/YjgQ family protein [Shewanella frigidimarina NCIMB 400] Length = 352 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 51/356 (14%), Positives = 125/356 (35%), Gaps = 4/356 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +LYI R I + + L + ++ +I+ + ++ LV ++ +L+P Sbjct: 1 MRILDLYIARMIVSTSSLCLLILTGLSGIIKWVDQLRLVGRGAYTMLDAGIYVLFLVPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + + N+EL+++ +G SR+ + + + AI L I + Sbjct: 61 IEMFFPMAVLLGALIGMGMLASNSELVVMQVSGMSRLQITQSAMKTAIPLMIMVMALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + +++ + D DL++ I + NTL I + + D Sbjct: 121 GAPIA-EKSAKELQATKISGGSLIKSHRGIWAKDGDLFVNIGEVQDVNTLSNISLYEFND 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 Q + ++ +D L+ E + + S + + Sbjct: 180 QQELTRVTHANTAVFVDDVWQ-LSVVENTTVKDDRVIRDHLDTDVWQSSLTPDKLSVVSV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K ++S L++ + + Y +++ Q + + L+++ Sbjct: 239 KPEALSISGLID-YLDYLKVNQQDPSRYELALWRKVMQPVTVAVMMLVALSFVFGPLRTV 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + SF + + + + P + + + + L I+K Sbjct: 298 TMGARVLLGVVAGFSFYISNEIFGPMSIVYELPAVVGAIA-PSMLFTGLALYYIRK 352 >gi|300770003|ref|ZP_07079882.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC 33861] gi|300762479|gb|EFK59296.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC 33861] Length = 359 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 52/357 (14%), Positives = 117/357 (32%), Gaps = 3/357 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 MK + YI++ +F+ + + + + ++++ ++ I+ + IP Sbjct: 1 MKIIDWYIIKKYLSTFVFTMAIFTVVMVIFDVSEKLDNFLQYKAPISKIVFQYYAGFIPF 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 L ++P + + M TE++ I + G S +++P + A L+ F+ Sbjct: 61 YLNFLSPLINFIAVIFFTSKMADQTEIVPILSGGMSFNRMLRPYMIAASLIFAVTFVFNI 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI-VDS 178 I P+ ++D + Y+ I ++ + F+ Sbjct: 121 YIIPRTNKMKVSFENVYVKPDKAGGSISATHMQIDSNTYVYIDNFDTRQKIGYNFVLEKF 180 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + A D + + + +++ + K TL + ++ Sbjct: 181 DADRLKEKMIADRIRWDSVATKWKIENYTNRVINGLNERMEKADQKDTTLDMKPSDFEKY 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 N L ++ E +KR I L+ + + K + Sbjct: 241 DNMFTAMNTDELSKRIDKEETRGTGMMTELLLEKYKRYIYPFSAFILTLMGVSLSSK-KV 299 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + I+LS + V FS + P I ++ L +S LM K Sbjct: 300 RGGIGLSLGLGIALSFVYIVLIQFSTMFSLKGGLPPLIAVMIPNLIFLSLGLYLMYK 356 >gi|322435367|ref|YP_004217579.1| permease YjgP/YjgQ family protein [Acidobacterium sp. MP5ACTX9] gi|321163094|gb|ADW68799.1| permease YjgP/YjgQ family protein [Acidobacterium sp. MP5ACTX9] Length = 813 Score = 119 bits (297), Expect = 7e-25, Method: Composition-based stats. Identities = 55/377 (14%), Positives = 143/377 (37%), Gaps = 21/377 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ YILR + L+ + F+ + ++ + + +V ++ SL+ + ++ Y +P Sbjct: 1 MRLLTRYILREVLSHALLGGVLFTFVLFTSRLGKILEIVVRNSASLSDVARLIAYFLPEA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L+ + ++E+ + +G + ++ V ++I + Sbjct: 61 LIVTIPMAVLVGILLGLSRLAADSEITAMRASGMGALDFVRIVSLVSIGALALGLFNSLY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN---TLQGIFIVD 177 + P+ + + L + + +E +F ++ + + P + + +F+ D Sbjct: 121 LAPRSAANLLALENSLKYSQASFEVEPRVFDEDFKNIVLYVQDVRPGSGAALWRHVFVAD 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAII---LNDGEVHRKSPIS-KDISIMKFKSYTLQTESA 233 + KI A + + L DG H+ SP +I F+ + ++ Sbjct: 181 LTEPSAPKITTADQALVTSAGPGNLNLHLTDGAQHQISPTDANQYNISTFQVTDIPMQTG 240 Query: 234 NSSTIVLKANDQNLSFLLNPNPNN---------PNYRPELLETYRSEFHKRLTQWLFPVI 284 L +D + L P P + Y+ E +KR + ++ Sbjct: 241 AQEDAHLSRSDTPILALSLPELIQRGNQAAAPGPKHDVRAARLYKIELNKRFSYPFACLV 300 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 L+ + ++ K +++ + F V++ S + + P+L ++ Sbjct: 301 LMLVGVPLGLS---SKRGGKSTGFVLTILLVF-VYYFLSSVGVALANQGKLPPVLGVWGA 356 Query: 345 -CISSIFLLMIKKKYTK 360 I + F ++ ++ ++ Sbjct: 357 NLIFAAFGALLLQQLSR 373 Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats. Identities = 48/392 (12%), Positives = 119/392 (30%), Gaps = 44/392 (11%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + YI+R G +F + + + + I + + + + LIP +L Sbjct: 424 ILDDYIMREFGATFALVLAAFSMVFLIFTFFELIGDIIRNRIAFVTVGDYLLNLIPYILY 483 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 VTP C + S+ + +E + +G S ++ PVL L +++ LF + Sbjct: 484 NVTPLCVLVAVLVTFGSLAKTSEFTAMKASGVSLYRVVTPVLVLTAVIACSLFAFDEFYL 543 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD--------------------------- 155 P+ + L + + ++L + + Sbjct: 544 PQANRRQEALRSVIKGKPAQTFLRPDRQWISGQTVLDPISLAQSRSWAPIAPAVVHIGDT 603 Query: 156 -------DLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEV 208 Y + +F D + +A+S D + I +G Sbjct: 604 AKQPARIFYYQFFDPDHDAFANLTVFEFDPATFTLTRRIFAESAKWDSNVNQWIFENGWS 663 Query: 209 HRKSPI--SKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLE 266 S + + ++ + L + ++ Sbjct: 664 RTFSGEVADTYKPFTLANFPEIHEQPQYFKKEDRQSQQMSFGEL-SSYISDLRQSGFNTM 722 Query: 267 TYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYII 326 + +++L ++ +++I A +R + I++ ++ V+ G S + Sbjct: 723 RLSVQLNRKLAYPAITLVMAILAIPFALS---SGKRGGVTGFAIAILLAV-VYLGVSSLF 778 Query: 327 HKIEQNPYYIPILYLF---LFCISSIFLLMIK 355 + P+L + L + +++ Sbjct: 779 EAMGNVNTLPPMLAAWTPDLLFTFAGAYFLLR 810 >gi|149201833|ref|ZP_01878807.1| permease YjgP/YjgQ [Roseovarius sp. TM1035] gi|149144881|gb|EDM32910.1| permease YjgP/YjgQ [Roseovarius sp. TM1035] Length = 373 Score = 119 bits (297), Expect = 7e-25, Method: Composition-based stats. Identities = 52/342 (15%), Positives = 122/342 (35%), Gaps = 5/342 (1%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 +L F L +V I W+ + ++ + + + + ++ + +P V+ +V P Sbjct: 1 MLSQFMVLFGFFALVLVSIFWINKAVRMFDRLIGDGQPAWVFVEFTALTLPGVIGVVLPI 60 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 V+ ++ +EL ++ TG S + L +PV +++++ + + + + P S Sbjct: 61 AAFAAAVYVVNRLSSESELTVMQATGYSPLRLARPVFVFGVIVAVMMSLLAHFLIPSSLS 120 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 ++ + +T L E F + I + + L+ +F+ D RD + Y Sbjct: 121 QLRLRLDEVSRNITAKLLSEGEFLHPAPGVTFYIREITLSGELRDVFLSDRRDPEAPVTY 180 Query: 188 YAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL--KAN 243 + + +++ G + F ++ S +V + Sbjct: 181 TSSRAYLVQEGGGTRLVMVSGLAQNIRAEQNRLFTTYFDDFSYDISSLVRRDVVNLDEVA 240 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 +L + ++ H R+T L VI L+ A R Sbjct: 241 FAGTLEMLRDPEAVAARTGVSMGAVMAQMHGRITAALLCVIAALVGFCTLLVGAHSRFG- 299 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC 345 + ++ + G+ S ++ + + P+LYL Sbjct: 300 VWRQVLLAFGLLVGLKIVESLVLAPVLASAVLWPLLYLPALI 341 >gi|37681089|ref|NP_935698.1| permease [Vibrio vulnificus YJ016] gi|320155253|ref|YP_004187632.1| putative Permease [Vibrio vulnificus MO6-24/O] gi|326423844|ref|NP_760390.2| lipopolysaccharide ABC transporter permease [Vibrio vulnificus CMCP6] gi|37199839|dbj|BAC95669.1| predicted permease [Vibrio vulnificus YJ016] gi|319930565|gb|ADV85429.1| predicted Permease [Vibrio vulnificus MO6-24/O] gi|319999214|gb|AAO09917.2| putative membrane protein [Vibrio vulnificus CMCP6] Length = 357 Score = 119 bits (297), Expect = 7e-25, Method: Composition-based stats. Identities = 48/355 (13%), Positives = 121/355 (34%), Gaps = 2/355 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +LYI R I + + + V ++ +I+ ++++ V T L L IP + Sbjct: 3 KILDLYIGRTIVATTSLVLVTFVGLSGIIKYVEQLRKVGKGTYDLLHALYFVLLSIPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++ + VL A+ L + + Sbjct: 63 EMFFPMAALLGALIGLGMLASSSELVVMQAAGFSKLDIGVSVLKTAVPLMLVVMALGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + + L+ + + D + +I I K + + ++ Sbjct: 123 APDAQ-KMARDLRSFALSGGSIVSVRSGVWAKDANDFIFIGKVDEDKLYGLNMWKFDQNK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + + +A+ D + ++ + ++ + + + +K Sbjct: 182 KLQSVIFAEEVDYQQDNRWLMRYVQITDMQDEKVISKHSLEQMEWETSLAPDKLAVVTVK 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + +LS L + + Y F ++LTQ + + L+++ Sbjct: 242 PEELSLSGLYD-YVTYLKASEQDASRYELAFWRKLTQPISIAVMMLMALSFVFGPLRSVT 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + +F + F + + P + + +L+ +K Sbjct: 301 MGARVISGVIAGFAFYISSEFFGPLTLVYGIPPVFGAVAPSIVFFIVAVMLLNRK 355 >gi|284051460|ref|ZP_06381670.1| permease YjgP/YjgQ [Arthrospira platensis str. Paraca] gi|291568812|dbj|BAI91084.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 392 Score = 119 bits (297), Expect = 7e-25, Method: Composition-based stats. Identities = 51/375 (13%), Positives = 129/375 (34%), Gaps = 23/375 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPT 59 + + YI++ + F+ +A V + + + V+ S +++ ++ +P Sbjct: 19 LSVLDRYIIQELIPPFIFGVGLFTSVAVTVGTVFELVRRVAESGLPVSVAFQVFLLKMPD 78 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + + P + T V ++ ++EL+ I + G S L+ P + + +++ F Sbjct: 79 FMVLAFPMSMILTTLMVYGRLSSDSELIAIRSCGISLYRLVIPAIIFSFVVTGMTFAFNE 138 Query: 120 IIEPKCRSTIKQLSAKAQL-------------ALTFSYLEENLFFRLDDDLYIKISKYNP 166 II P KA E R++ + ++ Sbjct: 139 IIVPAANFQATMTLQKALNEDALNISSTNIFFPEYERVSVEGTNRRVNVLRRLFYAEEFA 198 Query: 167 NNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSY 226 + + G+ I+D +I +++ + +G V+ P +I +F Sbjct: 199 DGKMSGVTILDRSRAGITQIISSRTAIWNPQESTWDFYNGTVYIVDPDGSYRNIARFDHK 258 Query: 227 TLQTE--SANSSTIVLKANDQNLSFLLNPNPNNPNYRPE-LLETYRSEFHKRLTQWLFPV 283 L + ++ + N++ + + + ++ V Sbjct: 259 QLHLSRVPLDLASQDRDYGEMNIAQTKEYLELMKLSGDQAKILKTKVRIQQKYALPFVCV 318 Query: 284 IFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 +FGL+ + + + IS+ I F ++ S+I I Q P + +L Sbjct: 319 VFGLLGSSL---GSRPGRTNRATSFGISVMIIFA-YYLLSFITGAIGQKGIISPFMAAWL 374 Query: 344 FCISSIFL--LMIKK 356 + + + ++ + Sbjct: 375 PTMLGLGVSGFLLYR 389 >gi|291614864|ref|YP_003525021.1| permease YjgP/YjgQ family protein [Sideroxydans lithotrophicus ES-1] gi|291584976|gb|ADE12634.1| permease YjgP/YjgQ family protein [Sideroxydans lithotrophicus ES-1] Length = 358 Score = 119 bits (297), Expect = 7e-25, Method: Composition-based stats. Identities = 50/360 (13%), Positives = 123/360 (34%), Gaps = 6/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ Y+ R I S + ++ + ++ ++ +N + L +L IP Sbjct: 1 MRLLTRYLRREIYASVALVFAALIMLFALLDLVNELNSMGRGDYRLGYVLLFVTLTIPGH 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + T L M ++EL + ++G S +I ++ + + L + F+ + Sbjct: 61 IYELFPVAVLIGTIFALVQMAASSELTVYRSSGVSLKQMIVMLVKIGLPLVVLCFLFGEV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P ++L KAQ + + D+ +I + P+ +L + I + Sbjct: 121 IAPPSERMAQELRMKAQNLKVSVKEFRSGVWAKDERSFINVRSMLPDTSLLDVSIYEFDA 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 T + + + LD L+ S + S +++ Sbjct: 181 TYHLRSITSAEHASYLDEDRWQLDGVRQTLFSKQGATTDNRPRAEWHTSLNPDILSVLLV 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + L + + Y +L L ++ L+++ + + R Sbjct: 241 VPEQMSAWNLYQ-YTMHLRENHQKTSRYEIAMWNKLVYPLAVLVMMLLALPFSAYQR--R 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL---FLFCISSIFLLMIKKK 357 + IF+ + + + + N + + +LF ++ +L ++ Sbjct: 298 EGGISGKIFMGIVLGLSFHFVGRLFANVGALNDWSPLLSATAMSWLFLALAMGMLWRTER 357 >gi|90408709|ref|ZP_01216858.1| hypothetical protein PCNPT3_03815 [Psychromonas sp. CNPT3] gi|90310191|gb|EAS38327.1| hypothetical protein PCNPT3_03815 [Psychromonas sp. CNPT3] Length = 354 Score = 119 bits (297), Expect = 7e-25, Method: Composition-based stats. Identities = 35/357 (9%), Positives = 110/357 (30%), Gaps = 4/357 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + + ++ ++ ++ +I+ ++++ V + + +P Sbjct: 1 MGILDRYIGKTVFAATFLTLFVLLGLSSIIKFVEQMRSVGQGSYDVLAAGYFVLLKMPVE 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + L S+ ++EL+++ G S+ + VL A+ + + + Sbjct: 61 MTVFFPMAALIGALIGLGSLASSSELVVMQAAGMSKFRIAGAVLKTAVPMVFAVMLLAEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + A+ + + ++ + D + + F + Sbjct: 121 VAPVTDKEAYSMRDLARSGQSSVSNKYGVWVKDADAFISIGRMNSQSELFNVRFYFFNES 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 Q A+ + +L D + ++ + I+ Sbjct: 181 MQLDHAVLAKK--VSYRGGYWLLEDSTWTKFESDRTNVEHKDSDVWQTDLTPKKLDVILS 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + ++ + + Y ++ V+ L+S+ Sbjct: 239 DPSKMSMRD-IYGYITYLENNQQDANRYLLILWRKAVLPFTVVVMMLLSVSFIFGGLRTV 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + I+ +F V + + L L + I + +++++ Sbjct: 298 TMGTRLILGIASGFAFHVSGELFGPASLVFGLSPLLGAL-LPSMLVLCIAMYLLRRQ 353 >gi|78222462|ref|YP_384209.1| permease YjgP/YjgQ [Geobacter metallireducens GS-15] gi|78193717|gb|ABB31484.1| permease YjgP/YjgQ [Geobacter metallireducens GS-15] Length = 359 Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 56/360 (15%), Positives = 120/360 (33%), Gaps = 4/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI R F + + I VI L++I + + Y IP + Sbjct: 1 MSILTRYIASAYLRVFWLCLASFIAIYLVIDFLEKIGRFLRFDPQWIHVAQFFLYKIPEI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 V P M T L ++RN+E++ + + G S + P+L +A S+F+ +S + Sbjct: 61 ATQVIPLAVLMATLLTLGMLSRNSEIIAMRSCGVSLRKISAPILAIACAASLFVIVSNEL 120 Query: 121 IEPKCRSTIKQLSAK-AQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 I PK S ++ + + + ++L +N + D+ + ++P++ + S Sbjct: 121 ILPKTYSQMRFIEEVLIRKKSSNTFLRQNNIWHKDNKAILMARAFDPDHQTLRGVTLWSF 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPIS-KDISIMKFKSYTLQTESANSSTI 238 + D L V + + + L + + + Sbjct: 181 SEGMTPSRRIDAEQGSWDGGQWTLWKVTVRDFQGGGVANTTQIASMPVNLNLQIEDLKVV 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 A++ L Y ++ H +++ +I + I A + + Sbjct: 241 DKYADNMGFLKL-REYIQKLKKGGYETTRYEAQMHSKISLPFASLIMAFLGIPFALRGSR 299 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-FLFCISSIFLLMIKKK 357 I ++ + + P + +F +S I+L M + Sbjct: 300 SSGVALGIGASIGFGFAYFIINAILISFGQTGVLPSLVSAWAANVIFALSGIWLAMTLNR 359 >gi|120599781|ref|YP_964355.1| permease YjgP/YjgQ family protein [Shewanella sp. W3-18-1] gi|146292283|ref|YP_001182707.1| permease YjgP/YjgQ family protein [Shewanella putrefaciens CN-32] gi|120559874|gb|ABM25801.1| permease YjgP/YjgQ family protein [Shewanella sp. W3-18-1] gi|145563973|gb|ABP74908.1| permease YjgP/YjgQ family protein [Shewanella putrefaciens CN-32] gi|319425583|gb|ADV53657.1| inner membrane component of lipopolysaccharide transporter, LptG [Shewanella putrefaciens 200] Length = 352 Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 49/355 (13%), Positives = 119/355 (33%), Gaps = 3/355 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK +LYI R I + + L + ++ +I+ + ++ LV T ++ +LIP Sbjct: 1 MKILDLYIARVILSTSALCLLVLTGLSGIIKWVDQLRLVGRGTYTMMDAGIYVLFLIPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + + N+EL+++ +G SR+ + + A+ L + + Sbjct: 61 IEMFFPMAVLLGALIGMGMLASNSELVVMQVSGLSRLQITLSAMKTAVPLMLMVMALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P +L A + ++ + D N + + Sbjct: 121 GAPVAEQKANELQAIKLSGGSLIKSHRGIWAKDGDLFVNIGEVENITKLNNITLYKFNSE 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + K+ +A+ D + L D + + + ++ + S + + Sbjct: 181 LKLTKVVHAERAVFTRD--SWRLFDVKRTDLTYDQVTLEHLEEDIWQSSLTPDKLSVVSV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K ++ LL + + Y ++L Q + + L+++ Sbjct: 239 KPEALSIQGLL-GYLDYLKTNSQDPSRYELALGRKLMQPVTVGVMMLVALSFVFGPLRTV 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + SF + + + + P Y+ + L F + + Sbjct: 298 TMGARVLLGVVAGFSFYISNEIFGPMSIVYELPAYVGAMAPSLLFTGIAFYFIRR 352 >gi|225012841|ref|ZP_03703274.1| permease YjgP/YjgQ family protein [Flavobacteria bacterium MS024-2A] gi|225002963|gb|EEG40940.1| permease YjgP/YjgQ family protein [Flavobacteria bacterium MS024-2A] Length = 357 Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 56/360 (15%), Positives = 118/360 (32%), Gaps = 6/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK +LYI++ +F + L + I ++ + ++I+ ++ Sbjct: 1 MKLIDLYIIKRYIGTFTVMILLFIPIGIMVDVAEKIDKFKEKEVPFGAIIDYYIDFTWYF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + + + NTE++ I ++G S ++P L A ++IF F + + Sbjct: 61 ANLLFPIFLFLSVIWFTSKLANNTEVIAILSSGISFFRYLRPFLLAATFIAIFAFFAGML 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I PK K + + +++ S + Sbjct: 121 IVPKSNLGFNDFRYKYIIKKEARNTTKVFQQINENEFIYVNSYDPIRKRATNFTLEHFEG 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + D L++ S+ + K E + + + Sbjct: 181 NKLKFKIKSNRIRWVEDDSVFRLSNYSKRTFLGDSEHFESIARKDTLFDFEIEDLAPVNY 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 A S L + L ++ HKR + + I +I++ + R Sbjct: 241 IAETLTFSELNQFIEDEKERGSMLTNSHLLVRHKRWSIPISAFILTIIAVAV---SSFKR 297 Query: 301 QRKKIHPIFISLSISFGVFW---GFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + +S+ F + F ++ K P L L LF I + FLL K+ Sbjct: 298 RGGMGVNLAFGISLGFLFIFFDKIFGVLVSKSTFPPVVAAWLPLVLFGILAFFLLRYAKR 357 >gi|209526011|ref|ZP_03274544.1| permease YjgP/YjgQ family protein [Arthrospira maxima CS-328] gi|209493537|gb|EDZ93859.1| permease YjgP/YjgQ family protein [Arthrospira maxima CS-328] Length = 392 Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 50/375 (13%), Positives = 130/375 (34%), Gaps = 23/375 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPT 59 + + YI++ + F+ +A V + + + V+ S +++ ++ +P Sbjct: 19 LSVLDRYIIQELIPPFIFGVGLFTSVAVTVGTVFELVRRVAESGLPVSVAFQVFLLKMPD 78 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + + P + T V ++ ++EL+ I + G S L+ P + + ++ F Sbjct: 79 FMVLAFPMSMILTTLMVYGRLSSDSELIAIRSCGISLYRLVIPAIIFSFFVTGMTFAFNE 138 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLE-------------ENLFFRLDDDLYIKISKYNP 166 II P KA + E R++ + ++ Sbjct: 139 IIVPAANFQATITLQKALNEDALNIRSTNIFFPEYERVSVEGTNRRVNVLRRLFYAEEFA 198 Query: 167 NNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSY 226 + + G+ I+D +I +++ + + +G V+ P +I +F Sbjct: 199 DGKMSGVTILDRSRAGITQIISSRTAIWNPEESTWDFYNGTVYIVDPDGSYRNIARFDHK 258 Query: 227 TLQTE--SANSSTIVLKANDQNLSFLLNPNPNNPNYRPE-LLETYRSEFHKRLTQWLFPV 283 L + ++ + N++ + + + ++ V Sbjct: 259 QLYLSRVPLDLASQDRDYGEMNIAQTKEYLELMKLSGDQAKILKTKVRIQQKYALPFVCV 318 Query: 284 IFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 +FGL+ + + + IS+ I F ++ S+I + Q P + +L Sbjct: 319 VFGLLGSSL---GSRPGRTNRATSFGISVMIIFA-YYLLSFITGAMGQKGILSPFMAAWL 374 Query: 344 FCISSIFL--LMIKK 356 + + + ++ + Sbjct: 375 PTMLGLGVSGFLLYR 389 >gi|91228858|ref|ZP_01262763.1| putative permease [Vibrio alginolyticus 12G01] gi|269966357|ref|ZP_06180443.1| Predicted permease [Vibrio alginolyticus 40B] gi|91187596|gb|EAS73923.1| putative permease [Vibrio alginolyticus 12G01] gi|269829034|gb|EEZ83282.1| Predicted permease [Vibrio alginolyticus 40B] Length = 356 Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 50/355 (14%), Positives = 118/355 (33%), Gaps = 2/355 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +LYI R I + + V ++ +I+ ++++ V L L +P + Sbjct: 3 KILDLYIGRTIISTTALVLATFVGLSGIIKYVEQLRKVGRGVYDLTHALYFVLLSVPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++ + VL A+ L I + Sbjct: 63 EMFFPMAALLGALIGLGMLASSSELVVMQAAGFSKLDIGLSVLKTAVPLMIVVMALGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + + ++ + + D + +I I K + D Sbjct: 123 APEAQ-KMARDLRAFAISGGSIVSVRSGVWARDANDFIFIGKVEDDKLYALNMWRFDDDK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 K+ +A+ D ++ ++ ++ + + + +K Sbjct: 182 NLQKVIFAEEVDYQQDNNWLMRYVQITDMENENVISKQDIEQMEWHTSLAPDKLAVVTVK 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + +LS L + + Y F ++LTQ L + L+++ Sbjct: 242 PEELSLSGLYD-YVTYLKASEQDASRYELAFWRKLTQPLSIAVMMLMALSFVFGPLRSVT 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + +F + F + + L L ++ L+ +K Sbjct: 301 MGARVLSGVVAGFTFYISSEFFGPLSLVYGISPVFGALAPSLVFLAIAIALLRRK 355 >gi|269103491|ref|ZP_06156188.1| putative membrane protein [Photobacterium damselae subsp. damselae CIP 102761] gi|268163389|gb|EEZ41885.1| putative membrane protein [Photobacterium damselae subsp. damselae CIP 102761] Length = 356 Score = 118 bits (296), Expect = 9e-25, Method: Composition-based stats. Identities = 44/355 (12%), Positives = 118/355 (33%), Gaps = 2/355 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I + ++ +V ++ +I+ ++++ V T L L +P + Sbjct: 3 KILDWYIGRTIIGTTALTLSTLVGLSAIIKYVEQLRKVGQGTYDLWNALIFVLLSVPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++ + L A+ L + + + Sbjct: 63 EMFFPMAVLLGALIGLGMLASSSELVVMQAAGFSKLDIGLSTLKTAVPLMLMVMLLGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + L ++ ++ + +D + + Sbjct: 123 APQAQKAARDLRTFWTSGGNMLSVQSGVWAKDGNDFIYIARVHEQKELDGINIWEFNGKN 182 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + + +A+ + L V +PI + + + + +K Sbjct: 183 KLTQSVFAEKAQY-NAEKGWSLKYVTVTDFAPIEIKETKYPTLDWQTTLTPDKLAIVTVK 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + +LS + N + Y F ++ Q + + L+++ Sbjct: 242 PEELSLSGVYN-YVQYLKESKQDASRYELAFWRKALQPVSIAVMMLLALSFVFGPLRSVT 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + +F + + ++ + P I L + ++ L+ +K Sbjct: 301 MGARVLSGVIFGFAFYISNEVFGPMSQVYRLPPVIGALAPSMVFLAITIYLLKRK 355 >gi|255066290|ref|ZP_05318145.1| permease, YjgP/YjgQ family [Neisseria sicca ATCC 29256] gi|255049500|gb|EET44964.1| permease, YjgP/YjgQ family [Neisseria sicca ATCC 29256] Length = 356 Score = 118 bits (296), Expect = 9e-25, Method: Composition-based stats. Identities = 41/360 (11%), Positives = 123/360 (34%), Gaps = 4/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +I+ + + + + + + +P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEIINEVGDLGKGSYNGATMAQYVLMQMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + +EL +I +G S L+ + ++ +I Sbjct: 61 AYELMPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLILSQFGLIFAIATAALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + + + A + + + + I + + P++TL GI I D Sbjct: 121 IAPVLSQKAENIKSAAINGKISTGN--TGLWLKEKNSIINVREMLPDHTLLGIKIWVRND 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + ++ + + L + S ++S +++ + + +++ Sbjct: 179 KNELRQATEAESAVLNNDGSWQLKNIRRSTLSEDKVEVSTAAEENWPIAVKRNLMDVLLV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K + ++ L ++ + + Y + ++L + + L++ + Sbjct: 239 KPDQMSVGELT-TYISHLENNNQNTQIYAIAWWRKLVYPVAAWVMALVAFAFTPQTTRHG 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 I L + F ++ P ++ L + + + +I+++ + Sbjct: 298 NMGLKLFGGICLGLLFHFAGRLFGFTSQLYGVPPFLAG-ALPTIAFALLAVWLIRRQERR 356 >gi|95928710|ref|ZP_01311456.1| permease YjgP/YjgQ [Desulfuromonas acetoxidans DSM 684] gi|95135055|gb|EAT16708.1| permease YjgP/YjgQ [Desulfuromonas acetoxidans DSM 684] Length = 360 Score = 118 bits (296), Expect = 9e-25, Method: Composition-based stats. Identities = 52/360 (14%), Positives = 121/360 (33%), Gaps = 5/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L + +S V I ++ ++++ + ++ + + IP + Sbjct: 1 MTLIQRYLLTTFTKITSLSLAAFVGIYLLVDFFEKVDDFLEHEAAAHLYIAYFAWKIPLI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + T L + EL + G ++ P L A+LL+ F Sbjct: 61 VSQMLPLTILLGTFLTLGGFTKTNELTAMRAGGIGLQRIVTPFLVTAVLLTGINFALNEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + T + N + + + I P + D Sbjct: 121 LVPVGTQRSNHIFRTEVKGKTQMLAKRNDLWFREANTLYHIQLALPEKKQLRGISLYLVD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSY---TLQTESANSST 237 +Q + + ++ + V P S+ ++ K ++ L+ + T Sbjct: 181 SQLNLLTRIEAQAATFKEDQWQAEHVTVRHFDPQSRQLTAQKEENLRLLPLKKTPEDFGT 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + K + + + L + YR + H RL+ +I ++I A +++ Sbjct: 241 VSGKNEELSFTQL-SKISTQMQREGLDATRYRVDMHSRLSTPFACIIMAFLAIPFALQKS 299 Query: 298 LVRQRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 I + + ISF + + + P+ +F + +FLL+ + Sbjct: 300 RNVNLSLGISISVLIGISFFIVQSTLIALGYSTVLPPFIAAWAANIIFALVGLFLLLSTR 359 >gi|71277954|ref|YP_267493.1| putative permease [Colwellia psychrerythraea 34H] gi|71143694|gb|AAZ24167.1| putative permease [Colwellia psychrerythraea 34H] Length = 355 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 129/356 (36%), Gaps = 3/356 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + YI R I + ++ V ++ +I+ ++++ + L Y +P Sbjct: 1 MRIIDFYIGRVIASTTFITLAVFVSVSGIIKFVEQMRAIGRGNYDLAHAALYVLYAVPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + + + N+EL+++ G SR+ +IK V+ A+LL I Sbjct: 61 VEVFFPMSALIGGLIGIGMLASNSELIVMQAAGLSRLDIIKSVMKTAVLLIIVSMAIGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + +++ A+A +N + D D ++ I + L+ + I D Sbjct: 121 LAPSGEAKAREIRAQAISG-GSLIAAKNGVWAKDGDYFVNIGEVLDRGQLKKVQIYGFND 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + +I D+ + +L D E + K + + + Sbjct: 180 ELKIDSWLSAKSAIYQDK-SWLLTDVEEFSLTENEIITKSHSQKIWNSSLTPKKLGVVTV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 +L L++ + + Y+ F +++ Q L + L+++ Sbjct: 239 TPESLSLRGLID-YLDYLEANEQDPSRYKLAFWRKIMQPLTVAVMLLVALSFIFGPLRSV 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + I F + + + Q P + + LF + + + KK Sbjct: 298 SMGARIMMGVFTGILFFISNEVLGSLSLVYQLPPILGAMIPSLFFVGIAWYFIGKK 353 >gi|148546262|ref|YP_001266364.1| permease YjgP/YjgQ family protein [Pseudomonas putida F1] gi|148510320|gb|ABQ77180.1| permease YjgP/YjgQ family protein [Pseudomonas putida F1] Length = 383 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 46/353 (13%), Positives = 119/353 (33%), Gaps = 26/353 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + + ++ I + ++ + + +L I G+ +P L Sbjct: 14 IVFRYLSREVLVTLSAVSAVLLVIIMSGRFIKYLAQAAQGVLDPGVLFLIMGFRLPGFLQ 73 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ TG S+ L+ + A L+++ + + Sbjct: 74 LILPLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLLGMTMAPAALVALLVAWLSLSLA 133 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFF--RLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + ++Q+ ++ F L F R + + L G+FI + R Sbjct: 134 PLGVAQVQQIISQQDALTEFDTLVPGRFQTLRDGSRVTYTEQLSDDRINLGGVFISEKRF 193 Query: 181 TQTHKIYYAQSGSIDLDRQAII---------LNDGEVHRKSPISKDISIMKFKSYTLQTE 231 Q A S + I L +G + +P D +K+ +Y + Sbjct: 194 NQDKTKDRAPSVLVAEKGHQEIQADGNRYLVLENGYRYDGNPGQADYRAIKYDTYGVLLP 253 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 + V + S L+ + R+E RL+ + + L+++ Sbjct: 254 KPEVAEEVTEREALPTSELI----------GKEGLRERAELQWRLSLPILVFVVTLLAVP 303 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLF 342 + ++ + + ++ + + + + P + + ++ Sbjct: 304 L---SRVNPRQGRFLKLLPAILLYMAYLTMLISVRGALEKGKLPIALGMWWVH 353 >gi|322418226|ref|YP_004197449.1| permease YjgP/YjgQ family protein [Geobacter sp. M18] gi|320124613|gb|ADW12173.1| permease YjgP/YjgQ family protein [Geobacter sp. M18] Length = 360 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 54/357 (15%), Positives = 119/357 (33%), Gaps = 7/357 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ Y+ + R + + I V+ +++++ + + S L+ IP + Sbjct: 1 MRILTRYVAKAYLRMLGLCLGSFITIYLVVDFMEKVSRFTRAGASWKYLVLFFITKIPEM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P M T L S + ++EL + + G S + P+L +++L+S+ + + Sbjct: 61 VVDSAPLAVLMATLLTLGSFSLSSELTAMRSCGVSLARISAPILAISVLMSLVVLMLGEF 120 Query: 121 IEPKCR-STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + PK I Q +Y ++ + ++ ++ S + P+ + Sbjct: 121 VIPKSYAQRIYIQEVLIQKKSPSTYFRQHNIWHREEGNVLRASLFEPSQNQLKGVTLWEV 180 Query: 180 DTQTHKIYYAQSGSIDL-DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 +T ++ Q + D V + + + Sbjct: 181 QPKTGLPLRRTDAALGQLGNQGWVFKDVVVREFEGADISRTRKYPQLAAPLKLKPADLKV 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + K +D LN Y ++FH R++ + + I A + Sbjct: 241 LGKYSDSMTLRELNRYCKKIQAGGYDATRYITQFHSRISLPFGCAVMAFLGIPFALRGG- 299 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF--LFCISSIFLLM 353 R I +S+ + F S II + Q PI + F + + Sbjct: 300 -RSSGIAFGIGLSIGVGFLYVIINSVIIS-VGQVGLLPPIAAAWATNFIFLAAGGWL 354 >gi|237736827|ref|ZP_04567308.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817] gi|229420689|gb|EEO35736.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817] Length = 360 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 48/362 (13%), Positives = 121/362 (33%), Gaps = 11/362 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI + +SF++S + + I V Q+ + + +S + + L+P Sbjct: 1 MKIIDKYISKNFIKSFMLSLMAFMGIFIVSQLFRVVKYLSDGRFTPGDAVYYIITLLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 V P + + ++SM N E++ + +G ++ + ++ ++S +F + Sbjct: 61 FIDVAPLAVLLGSMMTISSMASNLEIISLKTSGIKFRRIVLFPIIISAIISGVVFFVNDT 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV---- 176 + P + L + + N F R +D YI + + T I Sbjct: 121 LYPISLKINRDLRSGEVQKRVAPLEKRNAFLRGEDSNYIYLMQKVNRETGFAENIEIVDL 180 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + +I A G + ++ +L D ++ K + F + Sbjct: 181 NKSFDKIERIITAPEGRYNFGKKVWMLKDVNIYYGDDNKKPETKEFFSDSKYGDNPEHFI 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 T+ ++ + L E R + + + + Sbjct: 241 TLTVEPRTLTIKDL-KKTIREMKSIGGDTRELLVELGNRYSFPFASFVISFLGLAL---G 296 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMI 354 + + I + + +G ++ + N + P + ++ + + ++ Sbjct: 297 GRYVRGTSAVSLGICVLLGYG-YYVVQASFEALSANGFLNPFVGGWIPNIMFLVVGIYLL 355 Query: 355 KK 356 K Sbjct: 356 NK 357 >gi|71279918|ref|YP_267491.1| putative permease [Colwellia psychrerythraea 34H] gi|71145658|gb|AAZ26131.1| putative permease [Colwellia psychrerythraea 34H] Length = 388 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 54/371 (14%), Positives = 134/371 (36%), Gaps = 23/371 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+L+ + ++ L ++ I + ++ + S + +++ IP + Sbjct: 2 IIFRYLLKEVAKTQLAVFFVLMTIFISQKFVRVLGDASEGSIPGQLVMTFIALKIPDLAG 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + + ++E+ ++ G S +++ L LA++ +IF I + Sbjct: 62 FILPLSLFLGVLLAYGRIYADSEMTVLHACGVSEWYVVRVTLVLAVITAIFTGIFTLYLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ + S L F + + + T + ++ + Sbjct: 122 PLASEYQYKVKEELAADSGLSALVSGRFQQTGNQDAVVFIHDKDRETNSFNKVFVAQLPK 181 Query: 183 ---------THKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQT 230 + YA++G + D Q ++L DG + + SK+ + F Y +Q Sbjct: 182 GDNVDASIINSSLVYAKTGKVFEDDTGSQQLVLGDGIRYHRDIESKEFQSVAFNKYYIQI 241 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 + K + + L N P YR+ R+ L +I I++ Sbjct: 242 KDQEVEHQHRKLSAISTLELYNNMPPELE------SAYRATIQWRIAFPLACIILIFIAV 295 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN--PYYIPILYLFLFCISS 348 + ++ K + +L + G + + IE+N P + + + + + Sbjct: 296 PL---SVVNPRQGKFAKMLPALMLFLGYLLLLTSMRSAIEKNAIPSVVGLWPIHISALFI 352 Query: 349 IFLLMIKKKYT 359 +L++K++ + Sbjct: 353 GMMLLMKERSS 363 >gi|253583478|ref|ZP_04860676.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725] gi|251834050|gb|EES62613.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725] Length = 362 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 57/362 (15%), Positives = 129/362 (35%), Gaps = 13/362 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI + +SF +S + V I V Q+ + I VS S + + +IP +L Sbjct: 4 KIIDRYISKNFIKSFFLSLIAFVGIFLVSQLFKVIRYVSDGRFSADESIVYILTMIPKIL 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 V P + + ++SM N E++ + G S ++ +F++ +++I +F+ + + Sbjct: 64 IDVAPLAVLLGSLMTVSSMASNLEVISLKTAGISFKRIVLFPIFISAVIAIIVFLINDSL 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV----D 177 P +++ + N F R ++ Y+ + T G I + Sbjct: 124 YPYSVRKNREIKDGGNTRREMPVEKRNAFLRGENSNYVYLMGKINRETGFGENIEIVDLN 183 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + +I A+ G + ++ +L D ++ + K + F E T Sbjct: 184 EEFNKVERIITAKEGRYNFTKKVWVLKDANIYNGKELKKAEEVKLFTEDKYDDEPDKFIT 243 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 ++ + L + E R + I + + Sbjct: 244 KSVEPKTLTIKEL-KKSVREIKSIGGDTRELLVEIGNRYSFPFSSFIISFLGLSLG---- 298 Query: 298 LVRQRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMI 354 R + I ++LS++ G ++ + N + P + ++ I + + Sbjct: 299 -SRYVRGASAISMALSVALGYGYYIVQASFEALSINGFLNPFISGWIPNIIFLGIGIYFM 357 Query: 355 KK 356 + Sbjct: 358 YR 359 >gi|145631589|ref|ZP_01787355.1| predicted permease [Haemophilus influenzae R3021] gi|144982789|gb|EDJ90315.1| predicted permease [Haemophilus influenzae R3021] Length = 358 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 46/356 (12%), Positives = 118/356 (33%), Gaps = 1/356 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + YI + I + + + +V ++ +I+ +++ V T + + +G +P + Sbjct: 3 NTLDRYIGKSILGAIFATLMTLVGLSAIIKFVEQFRSVGKGTYDIWQAVIFTGLTMPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + L ++ +EL+++ + G SR + V+ A+ L +F I Sbjct: 63 ETFFPMAALLGALIALGNLASRSELVVMQSAGFSRFKIGMAVMKTALPLVVFTMIIGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + AKA + ++ ++ + + + Sbjct: 123 IPQTEQFARDMRAKALSGGSILSIKNGVWAKDGHHFVFVRRVTDDTKLDDIYIYTFDQQH 182 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 K+ +A S D L + + +++ + L+ Sbjct: 183 NLIKLKHANQASYSEDEAKWTLRQVNHSTITKDEIITTNHLSETWETSLTPDKLGAVSLR 242 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 ++S L + + + + + F +++ Q + + L+++ Sbjct: 243 PTSLSISGLYH-YISFLRETGQDVSRFELTFWRKIFQPVSVGVMMLLALSFIFGSLRSVT 301 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I + F V + P L L I I+ L+ +K+ Sbjct: 302 AGARIVTGICVGFLFYVVNEILGQTSVVYGIPAIFGALIPSLLFIVMIWWLLSRKR 357 >gi|295689676|ref|YP_003593369.1| permease YjgP/YjgQ family protein [Caulobacter segnis ATCC 21756] gi|295431579|gb|ADG10751.1| permease YjgP/YjgQ family protein [Caulobacter segnis ATCC 21756] Length = 380 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 61/361 (16%), Positives = 133/361 (36%), Gaps = 7/361 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ E Y+ R + L++ +V +A + + L +++ +S + LKI +P + Sbjct: 1 MRLIERYLFRQLLGPTLLATAALVALALLARSLSEFDVLVEQRQSAVVFLKIILLALPQL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + L ++ E+++ G SR +I P + LA++ ++ IS Sbjct: 61 LAIMMPLALFVAALVALNRLHTEQEIVVCFAGGMSRWAVISPAMRLAVMAALISLISGLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 ++P I++ + + + + ++ F L + N +N +Q +FI Sbjct: 121 LQPWSARQIRETAFDIKTDVASTLVQPGQFTEPGPGLTVYAQSINRDNKIQNLFIHQEMP 180 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA--NSS 236 Y ++ I + +I+ G + S + F YT S + Sbjct: 181 NGGASTYSSREAEIATRKGQPVLIMRHGSNQQFSRQG-VLQYTSFDEYTFDLSSLFRSDE 239 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + K D+ L P+ ++ + + +E H R L+ + ++I A Sbjct: 240 LLHYKIADRYPHELFFPDMTQ-DWERQNRDKMLAEGHSRFAGPLYNLALMAMAIAAVIGG 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R I + + V + +P + YL + I + Sbjct: 299 PFSRMGYG-KRIAAVGAAAGVVRIAGFGVQAACADSPELNVLQYLVPLTAMAWGFSQIFR 357 Query: 357 K 357 + Sbjct: 358 Q 358 >gi|121997477|ref|YP_001002264.1| permease [Halorhodospira halophila SL1] gi|121588882|gb|ABM61462.1| permease YjgP/YjgQ family protein [Halorhodospira halophila SL1] Length = 372 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 51/363 (14%), Positives = 123/363 (33%), Gaps = 19/363 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + Y++R + L + + Q++ + + + + G I Sbjct: 8 LSIIDRYLVREAAGAALAVLAVLFAVLSANQLIDYLADAAGGDLPGEAVAALMGLQILRY 67 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L +V P + L + R++EL ++ G ++ +L LA+ +++ + + Sbjct: 68 LGVVIPAALFLGIVLALGRLYRDSELPVLAACGVGPARQMRGLLLLALPVAVGVGALSTV 127 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P T + +A L+ F D + S+ + + L+ +F RD Sbjct: 128 AAPWASHTADVYAEQAARTADLGALQAGRFIGGGDAGTVYASRTDGDGVLREVFAHA-RD 186 Query: 181 TQTHKIYYAQSGSIDLD----RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + A G +D ++ + DG + P D + F + L ++ Sbjct: 187 GELETVIRADRGRQLIDPETGQRFFVFEDGHRYDGHPGQLDWRVTDFDRHGLLIDTREPR 246 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + L R+E RL+ + V+ L+++ A Sbjct: 247 EVSRDREGTPTAELWAAGGLQD----------RAEIEWRLSMPVMVVVLSLLAVPLA--- 293 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFLLMIK 355 + + + ++ + F S +E P+ L+ +L + Sbjct: 294 KAEPRDGRYGKLLSAVLVFVAYFQLLSSGREWLEAGIVPAPLGLWWVHLLAGVAVVLWTR 353 Query: 356 KKY 358 +++ Sbjct: 354 RRF 356 >gi|154248856|ref|YP_001409681.1| permease YjgP/YjgQ family protein [Fervidobacterium nodosum Rt17-B1] gi|154152792|gb|ABS60024.1| permease YjgP/YjgQ family protein [Fervidobacterium nodosum Rt17-B1] Length = 1111 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 57/356 (16%), Positives = 124/356 (34%), Gaps = 4/356 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ Y+L+ + F M + V + Q + + + ++ LL Y IP Sbjct: 1 MKTLTRYVLKQALKPFFMGLAGFIVFVSVEWLYQISDYIIRNRVGIDKLLLFVMYNIPYF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P V++ M N E+ + G S L+ P + LA++L F ++ + Sbjct: 61 TFLGIPVGVLFSIFWVISDMYNNREITALLVHGVSAKHLVTPFIILALILGFFSWLLGDY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P Q+ + S ++ N+ L+ D+Y + ++N ++ + Sbjct: 121 VVPTANYKSSQILNQYIFQSPESVVKTNMLVELEKDVYFYVKEHNKAKGELYDVVLFRNE 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDIS-IMKFKSYTLQTESANSSTIV 239 +I A+ + + L DG ++ + + M+FK L + Sbjct: 181 EGNEQILTAKK--VIKRKDGWFLLDGSMYIVELKTGFLKLDMQFKEMKLDVAGEIEEMLR 238 Query: 240 LKANDQN-LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 ++ S L E ++R L ++ LI + + Sbjct: 239 AYKTTRDKTSKELREQLQTYKKLGINASNLIVELNQRYANALGALVIVLIGLPVSLLFGF 298 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + + I F+ + + G S + + +P L +F + + + Sbjct: 299 ISRSWSIILTFLIIVLYQGSGAWLSGMGKEGLMDPMLATWLPNIVFSVVGFIMYIF 354 >gi|16332044|ref|NP_442772.1| hypothetical protein sll0496 [Synechocystis sp. PCC 6803] gi|1001356|dbj|BAA10843.1| sll0496 [Synechocystis sp. PCC 6803] Length = 394 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 35/371 (9%), Positives = 121/371 (32%), Gaps = 20/371 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + Y+ R + FL S + + + + N + + ++ +P Sbjct: 22 SLMDRYVARQLIPPFLFSVGVVASLGLAIGNLSDLGNKIVEKNLPVAKAAEVLLLKVPEF 81 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + T ++ + E++ I + G S LI P + L++L++ + F+ Sbjct: 82 LAYSLPVAVMLATMMTFGRLSGDCEIIAIRSCGVSLYRLILPAVVLSLLVTGWAFVLTEW 141 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIK------------ISKYNPNN 168 + P + ++ + ++F+ +++ + ++ Sbjct: 142 VVPVANYRATSILIESIDEEHPFWQNRDVFYPEFEEIKLDNGQTARRLKSLVYAEKFDGK 201 Query: 169 TLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 +Q + ++ + I + + + + D + G V+R + + F + + Sbjct: 202 EMQNLTVLQWTENHLKHIVLSDNATWNNDNKRWDFFHGTVYRLTETEDYQEAVPFTNKQI 261 Query: 229 QT--ESANSSTIVLKANDQNLSFLLNPNPN-NPNYRPELLETYRSEFHKRLTQWLFPVIF 285 + + + + ++ + + + ++ ++L ++F Sbjct: 262 ALPQSAFDFARQGRDPYEMTIAEAQDYIKILKLIGDEKKTQFFQVRTEQKLAFPFVCIVF 321 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLF 344 ++ + + + +++ I F + + + +L F Sbjct: 322 AVVGSAIGARPQ---RISRATGFGLTIVIIFAYYILGFFSGSLGIVGLISPTLAAWLPNF 378 Query: 345 CISSIFLLMIK 355 + + ++ Sbjct: 379 VGLGVGIWLLY 389 >gi|260779400|ref|ZP_05888291.1| putative membrane protein [Vibrio coralliilyticus ATCC BAA-450] gi|260604490|gb|EEX30790.1| putative membrane protein [Vibrio coralliilyticus ATCC BAA-450] Length = 356 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 47/357 (13%), Positives = 120/357 (33%), Gaps = 3/357 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +LYI R I + + V ++ +I+ ++++ V + L L IP + Sbjct: 3 KILDLYIGRTIIATTSLVLATFVGLSAIIKYVEQLRKVGQGSYDLLQALFYVLLSIPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++ + VL A+ L + + + Sbjct: 63 EMFFPMAALLGALIGLGMLASSSELVVMQAAGYSKLDIGLSVLKTAVPLMVLVTLLGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + + + + D + +I I K + + D Sbjct: 123 APQAQ-KMARDLRAFTTSGGAIMSVRTGVWARDANDFIFIGKVEDDKLYGLSMWRYNDDK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 Q + +A D ++ + + + + +T + + +K Sbjct: 182 QLESVVHAAEVDYLSDNTWVMKDVQLTEMADEVEITKTSLPEYRWTTSLAPDKLAVVTVK 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + +LS L + + Y +++TQ + L+++ Sbjct: 242 PEELSLSGLYD-YVTYLKASEQDASRYELALWRKVTQPFSIAVMMLMALSFIFGPLRSVT 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + +F + F + + P + + ++ L ++++K Sbjct: 301 MGARILSGVVAGFTFYISSEFFGPLSLVYSIPPVFGAV-MPSIVFLTVALALLRRKL 356 >gi|319944263|ref|ZP_08018539.1| permease YjgP/YjgQ family protein [Lautropia mirabilis ATCC 51599] gi|319742558|gb|EFV94969.1| permease YjgP/YjgQ family protein [Lautropia mirabilis ATCC 51599] Length = 382 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 49/381 (12%), Positives = 121/381 (31%), Gaps = 28/381 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+ R I + L + + ++ ++ + L + +P+ Sbjct: 1 MKLMARYLTREIAGGIMAVLLGFLGLFAFFDLINELDDIGQGGYRLPQAVLYVLLGLPSH 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + L +N+E + G SR ++ VL L +LL++ ++ Sbjct: 61 IYELMPVAALIGCIYALAQFAQNSEFTAMRAAGMSRQLALRGVLVLGVLLAVLTAVAGEW 120 Query: 121 IEPKCRSTIKQLSAKA----------QLALTFSYLEENLFFRLDDDLYIKISKYNPNNTL 170 I P +QL + L + ++ I + L Sbjct: 121 IAPMAEQRAQQLRMDVLGKGSGVGAFRSGLWLKDSVRGPDGQRLQTRFVNIGTLEADGGL 180 Query: 171 QGIFIVDSRDT-QTHKIYYAQSGSIDLDRQ----AIILNDGEVHRKSPISKDISI----- 220 + I + + + +A+ G + L E R + Sbjct: 181 SKVAIHEFDTDFRLTAVIHAEHGRYQPAHNGQASSWRLEGVETTRFNVSRTQTGYDALHA 240 Query: 221 ---MKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLT 277 + ++ + + +++ A D+ + L ++ + Y K++ Sbjct: 241 AVERRPETVWVSDLNPALLSVLAIAPDRMSALALWRYTSHLKENAQNANRYELALWKKVV 300 Query: 278 QWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP 337 L ++ ++++ VR +F +S+ G + + N + P Sbjct: 301 YPLAIIVMLMLALPFGYL--QVRAGGIGLKLFFGISLGVGFYIMNGLFSNLGLIN-TWPP 357 Query: 338 ILY--LFLFCISSIFLLMIKK 356 L + ++ L+M+ + Sbjct: 358 WLAVSIPSILFLALALVMLNR 378 >gi|330811514|ref|YP_004355976.1| permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379622|gb|AEA70972.1| Putative permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 373 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 47/366 (12%), Positives = 123/366 (33%), Gaps = 26/366 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + + ++ I + ++ + +S L I G+ +P L Sbjct: 2 IVFRYLSREVLLTLSAVSAVLLVIIMSGRFIKYLAQAASGALDPGSLFLIMGFRLPGFLQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + ++E+ ++ TG S+ L + LF A L+++ + + Sbjct: 62 LILPLGLFLGILLAYGRLYLDSEMTVLSATGMSQQRLFRMTLFPATLVALVVAWLSLSLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P+ + + L + F L F L D + ++ ++ + + ++ Sbjct: 122 PQGATQFQLLINQQDAMTEFDTLVPGRFQALRDGTRVTYTEQLSDDRIDLGGVFITQKNL 181 Query: 183 THKIYYAQSGSI-----------DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 + + S+ + +IL +G + P D +K+ +Y + Sbjct: 182 SSDAKKDRGISVLVAEKGRQEINPDGNRYLILENGYRYDGKPGQADYRAIKYDTYGVLLP 241 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S V + + LL R+E RL+ L I L+++ Sbjct: 242 KPEVSDEVTDRDAMPTASLL----------GNDDIRARTELQWRLSLPLLVFIVTLMAVP 291 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSI 349 + ++ + + ++ + + + P + + ++ ++ Sbjct: 292 L---SRVNPRQGRFLKLLPAILLYMAYLTILISARGALEKGKIPPALGLWWVHSIFLAIG 348 Query: 350 FLLMIK 355 L+ Sbjct: 349 LGLLYW 354 >gi|90580730|ref|ZP_01236533.1| putative permease [Vibrio angustum S14] gi|90437998|gb|EAS63186.1| putative permease [Vibrio angustum S14] Length = 357 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 46/355 (12%), Positives = 120/355 (33%), Gaps = 1/355 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I +F ++ +V ++ +I+ ++++ V + L L +P + Sbjct: 3 KILDWYIGRTIIATFSLTLSTLVGLSAIIKYVEQLRKVGQGSYDLLKALYFVLLSMPQDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++ + L A+ + I + + Sbjct: 63 IMFFPMAVLLGALIGLGMLASSSELVVMQAAGFSKLDIGLSTLKTAVPMMIVVVLLGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + ++ + + + ++ + D+ ++ N Sbjct: 123 APQAQKMAREYRSAWVYGGSVIAAQNGVWAKNDNSFIYMGRVHDLNKVDVVNIWQFDNKG 182 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 Q + A+ S D + + + S + K + + + +K Sbjct: 183 QLDDVTSAKRASYDKAKGWTMHDVTITDMTGSNQLTNSHIANKHWETTLTPDKLAVVTVK 242 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + +LS L + N + Y F ++ Q + + L+++ Sbjct: 243 PEELSLSGLYH-YVNYLKETKQDASRYELAFWRKALQPVSIAVMMLLALSFVFGPLRSVT 301 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + +F + + + + P + L L + L+ +K Sbjct: 302 MGARVLSGVIFGFAFYISDQVFGPMILVYRLPPILGALGPSLAFLFITIYLLRRK 356 >gi|88859093|ref|ZP_01133734.1| hypothetical protein PTD2_08814 [Pseudoalteromonas tunicata D2] gi|88819319|gb|EAR29133.1| hypothetical protein PTD2_08814 [Pseudoalteromonas tunicata D2] Length = 354 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 52/357 (14%), Positives = 128/357 (35%), Gaps = 4/357 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y+ R I ++ + L +V I+ +I+ ++++ V + + + + IP Sbjct: 1 MKILDWYLGRSILQTTGFALLVLVGISTLIKFIEQLKYVGRGSYDVMTAGLYTLFSIPAD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ N+EL+++ G SR +I+ V+ A+++++ + Sbjct: 61 VVTFFPMATLIGGLTGLGALASNSELVVMQAAGLSRFEIIRSVMKTALVMALCVMAMGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + K+L A + + D D+++ I + N L G+ + Sbjct: 121 GVPEAQKQAKELRTYAISG-GSIFNARQGVWAKDGDVFLNIDNVDDNGQLNGLKMYQFNK 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + +I +L + K + Y + + L Sbjct: 180 SLDLVAITNAQSAISHRD-GWLLKGVKTIYLDEQEVRQENTKEQLYVSELTPDKLGIVSL 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 KA + + L+ + + +Y ++L Q + + L+++ Sbjct: 239 KAESLSFTGLI-GYLDYLKKNEQDTSSYELALWRKLMQPVSIAVMLLVALSFIFGPLRSV 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + I F + I + + + ++ I + +IKK+ Sbjct: 298 SMGARIVMGVITGIVFHLSDKIFGPIVLVYELSPVVGAVF-PSLLFIGISIYLIKKR 353 >gi|227538454|ref|ZP_03968503.1| permease YjgP/YjgQ family protein [Sphingobacterium spiritivorum ATCC 33300] gi|227241736|gb|EEI91751.1| permease YjgP/YjgQ family protein [Sphingobacterium spiritivorum ATCC 33300] Length = 359 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 53/357 (14%), Positives = 118/357 (33%), Gaps = 3/357 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 MK + YI++ +F+ + + + + ++++ ++ I+ + IP Sbjct: 1 MKIIDWYIIKKYLSTFVFTMAIFTVVMVIFDVSEKLDNFLQYKAPISKIVFQYYAGFIPF 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 L ++P + + M TE++ I + G S +++P + A L+ F+ Sbjct: 61 YLNFLSPLINFIAVIFFTSKMADQTEIVPILSGGMSFNRMLRPYMIAASLIFAVTFVFNI 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 I P+ ++D + Y+ I ++ + F+++ Sbjct: 121 YIIPRTNKMKVSFENVYVKPDKAGGSISATHMQIDSNTYVYIDNFDTRQKIGYNFVLEKF 180 Query: 180 DTQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 D + A D + + + + + + K TL + ++ Sbjct: 181 DGDRLKEKMIADRIRWDSVATKWKIENYTNRVINGLHERMDKADQKDTTLDMKPSDFEKY 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 N L ++ E +KR I L+ + + K + Sbjct: 241 DNMFTAMNTDELSKRIDKEETRGTGMMTELLLEKYKRYIYPFSAFILTLMGVSLSSK-KV 299 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + I+LS + V FS + P I ++ L +S LM K Sbjct: 300 RGGIGLSLGLGIALSFVYIVLIQFSTMFSLKGGLPPLIAVMIPNLIFLSLGLYLMYK 356 >gi|145629200|ref|ZP_01784999.1| hypothetical protein CGSHi22121_10370 [Haemophilus influenzae 22.1-21] gi|145639140|ref|ZP_01794747.1| hypothetical protein CGSHiII_03859 [Haemophilus influenzae PittII] gi|144978703|gb|EDJ88426.1| hypothetical protein CGSHi22121_10370 [Haemophilus influenzae 22.1-21] gi|145271702|gb|EDK11612.1| hypothetical protein CGSHiII_03859 [Haemophilus influenzae PittII] gi|309750721|gb|ADO80705.1| Lipopolysaccharide export permease, LptG [Haemophilus influenzae R2866] Length = 358 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 48/356 (13%), Positives = 117/356 (32%), Gaps = 1/356 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + YI + I + + + +V ++ +I+ +++ V T + + +G IP + Sbjct: 3 NTLDRYIGKSILGAIFATLMTLVGLSAIIKFVEQFRSVGKGTYDIWQAVIFTGLTIPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + L ++ +EL+I+ + G SR + V+ A+ L +F I Sbjct: 63 ETFFPMAALLGALIALGNLASRSELVIMQSAGFSRFKIGIAVMKTALPLVVFTMIIGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + AKA + ++ ++ + + + Sbjct: 123 IPQTEQFARDTRAKALSGGSILSIKNGVWAKDGHHFVFVRRVTDDTKLDDIYIYTFDQQH 182 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 K+ +A S D L + + +++ + L+ Sbjct: 183 NLIKLKHANQASYSEDEAKWTLRQVNHSTITKDEIITTNHLSETWETSLTPDKLGAVSLR 242 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 ++S L + + + + + F +++ Q + + L+++ Sbjct: 243 PTSLSISGLYH-YISFLRETGQDVSRFELTFWRKIFQPVSVGVMMLLALSFIFGSLRSVT 301 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I + F V + P L L I I+ L+ +K+ Sbjct: 302 AGARIVTGICVGFLFYVVNEILGQTSVVYGIPAIFGALIPSLLFIVMIWWLLSRKR 357 >gi|145635440|ref|ZP_01791141.1| predicted permease [Haemophilus influenzae PittAA] gi|145641037|ref|ZP_01796618.1| predicted permease [Haemophilus influenzae R3021] gi|145267314|gb|EDK07317.1| predicted permease [Haemophilus influenzae PittAA] gi|145274198|gb|EDK14063.1| predicted permease [Haemophilus influenzae 22.4-21] Length = 358 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 47/356 (13%), Positives = 118/356 (33%), Gaps = 1/356 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + YI + I + + + +V ++ +I+ +++ V T + + +G +P + Sbjct: 3 NTLDRYIGKSILGTIFATLMTLVGLSAIIKFVEQFRSVGKGTYDIWQAVIFTGLTMPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + L ++ +EL+I+ + G SR + V+ A+ L +F I Sbjct: 63 ETFFPMAALLGALIALGNLASRSELVIMQSAGFSRFKIGIAVMKTALPLVVFTMIIGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + AKA + ++ ++ + + + Sbjct: 123 IPQTEQFARDMRAKALSGGSILSIKNGVWAKDGHHFVFVRRVTDDTKLDDIYIYTFDQQH 182 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 K+ +A S D L + + +++ + L+ Sbjct: 183 NLIKLKHANQASYSEDEAKWTLRQVNHSTITKDEIITTNHLSETWETSLTPDKLGAVSLR 242 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 ++S L + + + + + F +++ Q + + L+++ Sbjct: 243 PTSLSISGLYH-YISFLRETGQDVSRFELTFWRKIFQPVSVGVMMLLALSFIFGSLRSVT 301 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I + F V + P L L I I+ L+ +K+ Sbjct: 302 AGARIVTGICVGFLFYVVNEILGQTSVVYGIPAIFGALIPSLLFIVMIWWLLSRKR 357 >gi|149915564|ref|ZP_01904090.1| hypothetical protein RAZWK3B_06402 [Roseobacter sp. AzwK-3b] gi|149810456|gb|EDM70299.1| hypothetical protein RAZWK3B_06402 [Roseobacter sp. AzwK-3b] Length = 376 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 63/359 (17%), Positives = 130/359 (36%), Gaps = 5/359 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y++R + F L ++ I W+ + L+ + +S +LL++ +P V Sbjct: 1 MTKFDQYVIRKLITLFAFFALILIAIFWLDKALRMFERLLGKGQSNWLLLELILLTLPPV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P +V ++ E+ I+ +G S +I+P+ IL + + N Sbjct: 61 VASILPIASFASAVSVTNRLSSEAEITIMKASGCSTYRIIRPIFIFGILTTSLMAWLTNS 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P+ + L ++ +T S+L E F + + I K + L+ IF+ D RD Sbjct: 121 ILPESGKRLSSLRSQVDQNITSSFLTEGEFLHPTPGVTLFIGKVTQDAELRRIFLSDRRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAI--ILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST- 237 + I A+ + + ++ DG + + +F+ Y L +T Sbjct: 181 LRETIIITAEKAYTEHSPTTVQLLMVDGTTQILRENDNKLFVGRFEEYALDISELVETTY 240 Query: 238 -IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 L+ L E H R Q + I ++ Sbjct: 241 STQKTVTQAKTVELIKQPSEVIASTKATLGEVAFELHNRFAQPILCAIAAVLGATTLLTG 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + R I I+ + G+ S + + + ++Y+ + + +I Sbjct: 301 SYSRFG-VWRQIGIAFFLLVGLKLVESAVSAHVLNDSGLWFLMYVPSISGAVLICTIIY 358 >gi|86608831|ref|YP_477593.1| YjgP/YjgQ family protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557373|gb|ABD02330.1| putative membrane protein, YjgP/YjgQ family [Synechococcus sp. JA-2-3B'a(2-13)] Length = 370 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 56/365 (15%), Positives = 132/365 (36%), Gaps = 11/365 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 E Y+ + L + V ++ + + +L++ +P ++ Sbjct: 10 LLERYLFGEMLTPVLAGVAGGTLLLLVGRLFTLAERLVEGSVPPLTVLRLLVLDLPEMVV 69 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P T L ++ N+E+ + G + +P+L + + +S+ F N++ Sbjct: 70 LGMPIAAFFATMLTLGKLSGNSEITAMRAAGIPFSRIFRPLLLVGLAMSLSAFFISNVLL 129 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT- 181 P + I+Q+ +A LA + ++ ++FF+ +D+L+ I + +P + D Sbjct: 130 PASKQQIRQIDQQALLAQATTPVQYDVFFKTEDNLWFFIRQVDPRLNTMQDVTILRVDPL 189 Query: 182 ---QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA--NSS 236 + + + + L++G H P I+ F LQ Sbjct: 190 PGGKYQLVEVTLAAQAVWNGLEWSLSEGATHLYGPTGLSIAEQTFHRKPLQVSQDLAALM 249 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + ++ +L L + + R+EFH R + L LIS+ Sbjct: 250 QPPVPPSELSLPEL-AERISRLARSNLNTQALRTEFHMRFSLPLASFFAVLISLPLG--S 306 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF-CISSIFLLMIK 355 R+ + + + + FG + S + + + P + F + L++ Sbjct: 307 TTARRVGRYGGVVFGILLVFGYYVVLS-VSRSLGEVGALPPWAAAWSFNILFGGIGLVLL 365 Query: 356 KKYTK 360 ++ + Sbjct: 366 ARFLR 370 >gi|320107369|ref|YP_004182959.1| permease YjgP/YjgQ family protein [Terriglobus saanensis SP1PR4] gi|319925890|gb|ADV82965.1| permease YjgP/YjgQ family protein [Terriglobus saanensis SP1PR4] Length = 782 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 47/367 (12%), Positives = 122/367 (33%), Gaps = 19/367 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y++R S + + ++ V + I + + L + LIP ++ Sbjct: 418 LLDDYVMREFLTSLALVLSSFLVLSVVFSFFELIGDIIRNRTPLVTVGGYLLNLIPYMIY 477 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +TP C + + +NR++EL + +G S ++ P+ LA +L++ LF +++ Sbjct: 478 SLTPLCALIAVLVTVGGLNRSSELTAMKASGMSLYRIVAPIFVLAAVLAVGLFAFDDLYL 537 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD---------DLYIKISKYNPNNTLQGI 173 P+ + L ++ + ++L + + Y + Sbjct: 538 PQANRRQEALRSEIKGKPAQTFLRPDRKWISGQEANGSPTRIFYYQFFDSDKDVFANLTV 597 Query: 174 FIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 F + +A S + Q + +G + S + F + T Sbjct: 598 FEFQPGSFLLQRRIFATSARWNPQVQQWEMENGWQRTFNHES-IATYQPFATSTFPEIHE 656 Query: 234 NSS--TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 + + + + L+ ++ R + + ++ L ++ + ++ Sbjct: 657 LPAYFKKESRPSQEMSYGDLSAYIHDLKQSGFDTMRLRVQLNHKIAYPLMTLVMAIFAVP 716 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF---LFCISS 348 A +R + ++ ++ S N P+L + L Sbjct: 717 FAMMMG---KRGSLAGYATAIGMAIAYQLIASVFESMGNVN-ALPPMLAAWSVDLLFALG 772 Query: 349 IFLLMIK 355 L+++ Sbjct: 773 GTYLLLR 779 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 54/363 (14%), Positives = 135/363 (37%), Gaps = 15/363 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVI-QILQRINLVSSSTESLNILLKISGYLIPT 59 M+ YILR + ++ F+ ++ + + L + + N + +I Y +P Sbjct: 1 MRILTRYILREVVSHAMLGGALFTFVLFMQRDLGHILELAVRGSATPNDVGRILLYSLPA 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 L P + L ++ ++E+ + +G + ++ V ++ + ++ Sbjct: 61 TLTFTIPMTVLVGILLGLGRLSADSEVTAMRASGFGVMQFVRVVSMSTVVALLVGLVNSL 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN---TLQGIFIV 176 I PK +++ +L + + ++ +F+ + + + P+ + +F+ Sbjct: 121 YIAPKSTASLLRLENDLKSSQASFEVQPRVFYEDFKNYVLYVQDTQPSQGATIWKHVFLA 180 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAII---LNDGEVHRKSPIS-KDISIMKFKSYTLQTES 232 D T I A + + +Q + DG H+ SP +I F + ++ Sbjct: 181 DLTQPATPYITTANQAVVAVGKQQTLRLHFMDGSTHQISPTDPNQYNISTFAENDVPMQA 240 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 I L +D ++ + P+ E ++RL+ + V+ L+ + Sbjct: 241 GQQEDIKLTRSDAPMAAMTAGQLWQAQPGPQRRAAM-IELNRRLSYPIACVVLMLVGVPL 299 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFS---YIIHKIEQNPYYIPILYLFLFCISSI 349 R+ K +++ + F ++ S + + + +P LF + + Sbjct: 300 GLS---SRRGGKSTGFVLTIVLVFLYYFLSSVGVALAKQGKLHPVIGVWAANVLFGFAGV 356 Query: 350 FLL 352 LL Sbjct: 357 LLL 359 >gi|256425866|ref|YP_003126519.1| permease YjgP/YjgQ family protein [Chitinophaga pinensis DSM 2588] gi|256040774|gb|ACU64318.1| permease YjgP/YjgQ family protein [Chitinophaga pinensis DSM 2588] Length = 359 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 60/359 (16%), Positives = 115/359 (32%), Gaps = 2/359 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILL-KISGYLIPT 59 M + YILR +F+ S + ++ I+ VI + ++I+ S+ S ++ IP Sbjct: 1 MTKIDWYILRKFIGTFIYSLMILLVISVVIDVTEKIDDFMSNNLSFYTIVVDYYFGFIPH 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + ++ P + + M TE++ I +G S ++P A L L++ Sbjct: 61 IAALLFPLFIFISVIFFTSKMAYRTEIVAILCSGVSFRRFLRPYWVGAFLFGGLLWLGNR 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS- 178 P + A+ + R+D Y+ Y+PN F+ + Sbjct: 121 WTVPVANKIRTKFEAEYVHKKKAQLNMYDKTIRVDSFTYVTFGSYDPNYKSGSNFLYEDV 180 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 R A S D L+ + + + + + + Sbjct: 181 RGQNIKFKMKADRISWDSVAGKWKLDYVTMRAINGLKERWWSKTDTTIKIPLNPKEMYEE 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 L E L T+ E ++R VI LI + A K+ Sbjct: 241 KNIQEAMTTPELDTYIAREELKGAEGLNTFYVEKYRRTASSGAVVILTLIGGIIASKKVR 300 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + + + K + NP + FLF + +L + K Sbjct: 301 GGSGLHLAVGIVISASYIIFLQFSTVFSIKADLNPLLAVWIPNFLFGGLAFWLYLRAPK 359 >gi|218778207|ref|YP_002429525.1| permease YjgP/YjgQ family protein [Desulfatibacillum alkenivorans AK-01] gi|218759591|gb|ACL02057.1| permease YjgP/YjgQ family protein [Desulfatibacillum alkenivorans AK-01] Length = 398 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 61/362 (16%), Positives = 118/362 (32%), Gaps = 11/362 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+L + F ++ L I + ++LQ + V + L ++ + Y +P L Sbjct: 6 IVFKYMLGEMLPPFGVTLLVFALIFLMTRMLQLTDYVVNFRVGLGHVMMLLMYSMPFFLI 65 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 V P M M+ + E+ + G S +L+ PVL ++ I Sbjct: 66 FVIPMSTMMAVLLTFLRMSSDNEITALKAAGWSLYSLLPPVLAFCTAAALLTASMSFIGL 125 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSRDT 181 P R K+L L+E F R ++ + + + + TL +FI D RD Sbjct: 126 PWGRMAAKELLIDVARQNVEIGLKERSFERTFKNVVLYVGSVDVESRTLHHVFIEDRRDK 185 Query: 182 QTHKIYYAQSGSIDLDR----QAIILNDGEVHRKSPISKDISIMKFKSYTLQT---ESAN 234 Q A +G I + LNDG + R + + F SY + Sbjct: 186 QLSSTIMASTGRIIPSDGDDIWQLRLNDGVIVRADRKKSSMFTVNFDSYDFNLNLGTALG 245 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + + LL E HK+ + ++ GL ++ Sbjct: 246 ARDGEKDEEEMYFKELLTFVKRYNKKDDRYYLALL-EVHKKFSIPFSCIVLGLAAVPLGI 304 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R+ + + + + + P +++ I ++ + Sbjct: 305 VSRSARRSFGVALGLGLFLLYYLLLSAGWVFGEAGKYPPMI--GMWVPNLVIGAMGGFSL 362 Query: 355 KK 356 + Sbjct: 363 VR 364 >gi|148827126|ref|YP_001291879.1| permease [Haemophilus influenzae PittGG] gi|148718368|gb|ABQ99495.1| predicted permease [Haemophilus influenzae PittGG] Length = 358 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 47/356 (13%), Positives = 118/356 (33%), Gaps = 1/356 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + YI + I + + + +V ++ +I+ +++ V T + + +G +P + Sbjct: 3 NTLDRYIGKSILGAIFATLMTLVGLSAIIKFVEQFRSVGKGTYDIWQAVIFTGLTMPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + L ++ +EL+I+ + G SR + V+ A+ L +F I Sbjct: 63 ETFFPMAALLGALIALGNLASRSELVIMQSAGFSRFKIGIAVMKTALPLVVFTMIIGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + AKA + ++ ++ + + + Sbjct: 123 IPQTEQFARDMRAKALSGGSILSIKNGVWAKDGHHFVFVRRVTDDTKLDDIYIYTFDQQH 182 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 K+ +A S D L + + +++ + L+ Sbjct: 183 NLIKLKHANQASYSEDEAKWTLRQVNHSTITKDEIITTNHLSETWETSLTPDKLGAVSLR 242 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 ++S L + + + + + F +++ Q + + L+++ Sbjct: 243 PTSLSISGLYH-YISFLRETGQDVSRFELTFWRKIFQPVSVGVMMLLALSFIFGSLRSVT 301 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I + F V + P L L I I+ L+ +K+ Sbjct: 302 AGARIVTGICVGFLFYVVNEILGQTSVVYGIPAIFGALIPSLLFIVMIWWLLSRKR 357 >gi|309972901|gb|ADO96102.1| Lipopolysaccharide export permease, LptG [Haemophilus influenzae R2846] Length = 358 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 47/356 (13%), Positives = 119/356 (33%), Gaps = 1/356 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + YI + I + + + +V ++ +I+ +++ V T + + +G +P + Sbjct: 3 NTLDRYIGKSILGAIFATLMTLVGLSAIIKFVEQFRSVGKGTYDIWQAVIFTGLTMPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + L ++ +EL+I+ + G SR + V+ A+ L +F I Sbjct: 63 ETFFPMAALLGALIALGNLASRSELVIMQSAGFSRFKIGIAVMKTALPLVVFTMIIGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + AKA + + ++ ++ + + + Sbjct: 123 IPQTEQFARDMRAKALSSGSILSIKNGVWAKDGHHFVFVRRVTDDTKLDDIYIYTFDQQH 182 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 K+ +A S D L + + +++ + L+ Sbjct: 183 NLIKLKHANQASYSEDEAKWTLRQVNHSTITKDEIITTNHLSETWETSLTPDKLGAVSLR 242 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 ++S L + + + + + F +++ Q + + L+++ Sbjct: 243 PTSLSISGLYH-YISFLRETGQDVSRFELTFWRKIFQPVSVGVMMLLALSFIFGSLRSVT 301 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I + F V + P L L I I+ L+ +K+ Sbjct: 302 AGARIVTGICVGFLFYVVNEILGQTSVVYGIPAIFGALIPSLLFIVMIWWLLSRKR 357 >gi|229845238|ref|ZP_04465371.1| predicted permease [Haemophilus influenzae 6P18H1] gi|229811833|gb|EEP47529.1| predicted permease [Haemophilus influenzae 6P18H1] Length = 358 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 120/356 (33%), Gaps = 1/356 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + YI + I + + + +V ++ VI+ +++ V T + + +G +P + Sbjct: 3 NTLDRYIGKSILGAIFATLMTLVGLSAVIKFVEQFRSVGKGTYDIWQAVIFTGLTMPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + L ++ +EL+++ + G SR + V+ A+ L +F I Sbjct: 63 ETFFPMAALLGALIALGNLASRSELVVMQSAGFSRFKIGMAVMKTALPLVVFTMIIGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + AKA + ++ ++ + ++ + + Sbjct: 123 IPQTEQFARDMRAKALSGGSILSIKNGVWAKDGNNFVFVRRVTDDAKLDDIYIYTFDQQH 182 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 ++ ++ S D L + + +++ + L+ Sbjct: 183 NLTELKHSNQASYSEDEAKWTLRQVNHSTITKDEIITTNHLLETWETSLTPDKLGAVSLR 242 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 ++S L + + + + + F +++ Q + + L+++ Sbjct: 243 PTSLSISGLYH-YISFLRETGQDVSRFELTFWRKIFQPISVGVMMLLALSFIFGSLRSVT 301 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I + F V + + P L L I I+ L+ K+ Sbjct: 302 AGARIVTGICVGFLFYVVNEILGQMSVVYGIPAIFGALIPSLLFIVMIWWLLSHKR 357 >gi|109899862|ref|YP_663117.1| permease YjgP/YjgQ [Pseudoalteromonas atlantica T6c] gi|109702143|gb|ABG42063.1| permease YjgP/YjgQ [Pseudoalteromonas atlantica T6c] Length = 368 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 45/365 (12%), Positives = 121/365 (33%), Gaps = 23/365 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ +S L ++ I + ++ ++ S+ +++L +P + Sbjct: 2 LIFRYLVKETVKSQTAVFLVLMAIFITNKFVRVLSEASNGDIPASLVLGFLALSMPVLAS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + ++E+ ++ G S + + +L LA+++++ I Sbjct: 62 LILPLSLFLGIMLAHGRLYVDSEMTVMRACGISEWYVTRVMLVLAVIMALITGAMTLWIA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD----LYIKISKYNPNNTLQGIFIVDS 178 P QL +A + L F + ++ +I + + D+ Sbjct: 122 PLSVEREYQLEEQAGADTGLTTLIPGRFQQTANEKAVIFVHEIGNDSEPLKRVFMAQHDT 181 Query: 179 RDTQTHKIYYAQSG----SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + + + ++L DG + + KD +++F Y +Q Sbjct: 182 TTDSQNVHLVYAKQGGLRELPDGSETLVLGDGIQYEGTLGEKDYRVVEFGEYQIQIAEQE 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + K + L + + +E R L +I++ Sbjct: 242 AEQKRRKLSAYTTMQLFEDSSIDA----------IAELQWRFAIPLSLFFLVIIAVPL-- 289 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLL 352 A ++ + +F +L + G F + + P + + ++ L Sbjct: 290 -SAADPRQGRFGKMFPALMLYLGYFLLLLAGRKVLEDGKIPPMLGLWWVHAVIGIIGMTL 348 Query: 353 MIKKK 357 + K + Sbjct: 349 IFKGR 353 >gi|83814343|ref|YP_445251.1| hypothetical protein SRU_1124 [Salinibacter ruber DSM 13855] gi|83755737|gb|ABC43850.1| membrane protein, putative [Salinibacter ruber DSM 13855] Length = 410 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 43/365 (11%), Positives = 123/365 (33%), Gaps = 12/365 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK-ISGYLIPT 59 M +FE +I++ + + F++ ++ V+ ++ + ++ + +P Sbjct: 50 MSTFERHIIKRLLKGFVLFVGALLVFFIVLHWVEYSDDFLDGGATIWEVFTVFYPNYVPE 109 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ + +P + + ++ + +L+ + +G S L++P L + +L+++F+F Sbjct: 110 IIRLTSPLALFLSCIYLTGTLAQELQLVALQTSGVSLYQLMRPYLGVGLLVTVFMFGFNG 169 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + PK + + + S + R + + + Y+ + + Sbjct: 170 WVVPKTNEVVVRYENEYLPGNQKSVQTSEIHRRNGPNSILSVGYYDADRERAHTVSLQQL 229 Query: 180 DTQTHKIYYAQSGSIDLDR--QAIILNDGEVHRKSPI-SKDISIMKFKSYTLQTESANSS 236 + ++ D + L+D ++ + TLQ + + Sbjct: 230 AGDARLARRVDANRMEWDDSLEVWRLDDVTRRTFVKGETQRKRTIASLDTTLQVYPRDLA 289 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L ++ + ++ LI + A Sbjct: 290 RSKNDVAAMTIPAAAEYLAALRRSGVGGLTRPLVAYYNKFAYPFANLLLVLIGVPIA--- 346 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL----FCISSIFLL 352 + R+ + I L I+F V+ + + P +L F + ++ +L Sbjct: 347 STRRRGGQAVRFAIGLLIAF-VYLSVQKLAEPLGYAGTLSPAWTAWLPHLTFAVVALLVL 405 Query: 353 MIKKK 357 +K Sbjct: 406 WWARK 410 >gi|301170458|emb|CBW30065.1| conserved inner membrane protein [Haemophilus influenzae 10810] Length = 358 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 48/356 (13%), Positives = 118/356 (33%), Gaps = 1/356 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + YI + I + + + +V ++ +I+ +++ V T + + +G IP + Sbjct: 3 NTLDRYIGKSILGAIFATLMTLVGLSAIIKFVEQFRSVGKGTYDIWQAVIFTGLTIPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + L ++ +EL+I+ + G SR + V+ A+ L +F I Sbjct: 63 ETFFPMAALLGALIALGNLASRSELVIMQSAGFSRFKIGIAVMKTALPLVVFTMIIGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + AKA + ++ ++ + + + Sbjct: 123 IPQTEQFARDMRAKALSGGSILSIKNGVWAKDGHHFVFVRRVTDDTKLDDIYIYTFDQQH 182 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 K+ +A S D L + + +++ + L+ Sbjct: 183 NLIKLKHANQASYSEDEAKWTLRQVNHSTITKEEIITTNHLSETWETSLTPDKLGAVSLR 242 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 ++S L + + + + + F +++ Q + + L+++ Sbjct: 243 PTSLSISGLYH-YISFLRETGQDVSRFELTFWRKIFQPVSVGVMMLLALSFIFGSLRSVT 301 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I + F V + P L L I I+ L+ +K+ Sbjct: 302 AGARIVTGICVGFLFYVVNEILGQTSVVYGIPAIFGALIPSLLFIVMIWWLLSRKR 357 >gi|15642495|ref|NP_232128.1| hypothetical protein VC2499 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|227082618|ref|YP_002811169.1| putative Inner membrane protein [Vibrio cholerae M66-2] gi|229507443|ref|ZP_04396948.1| hypothetical protein VCF_002672 [Vibrio cholerae BX 330286] gi|229509632|ref|ZP_04399113.1| hypothetical protein VCE_001032 [Vibrio cholerae B33] gi|229516757|ref|ZP_04406203.1| hypothetical protein VCC_000774 [Vibrio cholerae RC9] gi|229606949|ref|YP_002877597.1| hypothetical protein VCD_001858 [Vibrio cholerae MJ-1236] gi|254851044|ref|ZP_05240394.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255744522|ref|ZP_05418474.1| putative membrane protein [Vibrio cholera CIRS 101] gi|298500670|ref|ZP_07010474.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|9657080|gb|AAF95641.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|227010506|gb|ACP06718.1| putative Inner membrane protein [Vibrio cholerae M66-2] gi|229345820|gb|EEO10792.1| hypothetical protein VCC_000774 [Vibrio cholerae RC9] gi|229353106|gb|EEO18045.1| hypothetical protein VCE_001032 [Vibrio cholerae B33] gi|229354948|gb|EEO19869.1| hypothetical protein VCF_002672 [Vibrio cholerae BX 330286] gi|229369604|gb|ACQ60027.1| hypothetical protein VCD_001858 [Vibrio cholerae MJ-1236] gi|254846749|gb|EET25163.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255738047|gb|EET93440.1| putative membrane protein [Vibrio cholera CIRS 101] gi|297540839|gb|EFH76896.1| conserved hypothetical protein [Vibrio cholerae MAK 757] Length = 356 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 46/355 (12%), Positives = 122/355 (34%), Gaps = 2/355 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I + + + V ++ +I+ ++++ V + L L IP + Sbjct: 3 KILDWYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGEGSYDLLQALLFVVLSIPRDV 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L ++ ++EL+++ G S++ + VL AI L I + + Sbjct: 63 EMFFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIIVTLLGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + + + + D + +I I+K + + Sbjct: 123 APQAQ-KMARDMRAFATSGGAIMSVRTGVWARDANDFIFIAKVENEHLYGLNLWRFDENK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + + +++ + + ++ + + I + + + + +K Sbjct: 182 KLSTVIFSEQVDYVANNEWLMKDAVLTRLVNDIEISKESLPEYRWRTSLAPDKLAVVTVK 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + +L+ L + + + Y +++TQ + + L+++ Sbjct: 242 PEELSLTGL-SDYVHYLKASEQDSSRYELALWRKVTQPISIAVMMLMALSFIFGPLRSVT 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + SF + F + + P L L ++ L+ +K Sbjct: 301 MGARILSGVIAGFSFYISSEFFGPLSLVYGLPPLFGALAPSLVFLAIALGLLGRK 355 >gi|254491744|ref|ZP_05104923.1| putative permease, YjgP/YjgQ family [Methylophaga thiooxidans DMS010] gi|224463222|gb|EEF79492.1| putative permease, YjgP/YjgQ family [Methylophaga thiooxydans DMS010] Length = 354 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 52/358 (14%), Positives = 119/358 (33%), Gaps = 7/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI + I S L+ L ++ + + + ++ + + +L +P Sbjct: 1 MKILQRYIAKNIIASTLLVLLVLLGLYTFMDFITELDDLGKGNYQILDILSYLALTMPKR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P M + L ++ +EL+ + G S + K VL +A LL + + + Sbjct: 61 IYELLPVAALMGSVIGLGNLASQSELVAMRAAGVSIKDINKAVLIVAGLLVVVALVMGEV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + T E F+ D + + I + N + + + I + D Sbjct: 121 FRPIAEQK-ARQMQSVSQTGTVGSRSEYGFWTRDGNHFNHIERINADGSFSNVAIYEFDD 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 +I + + + + IL+D ++S + + Q + +V+ Sbjct: 180 KHRLRILTQAVAA-EYQQDSWILSDVVQSTIDEKGVEVSSVAHARWKSQLNPGMVNIVVV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + LL + + Y F ++ L + L+++ Sbjct: 239 PPEFLPVWDLL-EYVQYLKRNHQSVAQYELAFWSKMMMPLSTAVMVLLAVPFVFGPLRST 297 Query: 301 QRKKIHPIFISLSISFGVFW-GFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 L I F +F F ++ P+ +F + ++ + Sbjct: 298 PIGGRVLAGTLLGIGFHLFNQSFQHMGLVFGLLPWLASAFPTMVFAGLA---WLMNSR 352 >gi|229521564|ref|ZP_04410982.1| hypothetical protein VIF_002100 [Vibrio cholerae TM 11079-80] gi|229341158|gb|EEO06162.1| hypothetical protein VIF_002100 [Vibrio cholerae TM 11079-80] Length = 356 Score = 117 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 46/355 (12%), Positives = 121/355 (34%), Gaps = 2/355 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I + + + V ++ +I+ ++++ V + L L IP + Sbjct: 3 KILDWYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGEGSYDLLQALLFVVLSIPRDV 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L ++ ++EL+++ G S++ + VL AI L I + + Sbjct: 63 EMFFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIIVTLLGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + + + + D + +I I+K + Sbjct: 123 APQAQ-KMARDMRAFATSGGAIMSVRTGVWARDANDFIFIAKVENEQLYGLNLWRFDENK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + + +++ + + ++ + + I + + + + +K Sbjct: 182 KLSTVIFSEQVDYVANNEWLMKDAVLTRLVNDIEISKESLPEYRWRTSLAPDKLAVVTVK 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + +L+ L + + + Y +++TQ + + L+++ Sbjct: 242 PEELSLTGL-SDYVHYLKASEQDSSRYELALWRKVTQPISIAVMMLMALSFIFGPLRSVT 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + SF + F + + P L L ++ L+ +K Sbjct: 301 MGARILSGVIAGFSFYISSEFFGPLSLVYGLPPLFGALAPSLVFLAIALGLLGRK 355 >gi|319776037|ref|YP_004138525.1| inner membrane protein [Haemophilus influenzae F3047] gi|329123195|ref|ZP_08251764.1| YjgP/YjgQ family membrane protein [Haemophilus aegyptius ATCC 11116] gi|317450628|emb|CBY86848.1| conserved inner membrane protein [Haemophilus influenzae F3047] gi|327471540|gb|EGF16984.1| YjgP/YjgQ family membrane protein [Haemophilus aegyptius ATCC 11116] Length = 358 Score = 117 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 48/356 (13%), Positives = 118/356 (33%), Gaps = 1/356 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + YI + I + + + +V ++ +I+ +++ V T + + +G IP + Sbjct: 3 NTLDRYIGKSILGAIFSTLMTLVGLSAIIKFVEQFRSVGKGTYDIWQAVIFTGLTIPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + L ++ +EL+I+ + G SR + V+ A+ L +F I Sbjct: 63 ETFFPMAALLGALIALGNLASRSELVIMQSAGFSRFKIGIAVMKTALPLVVFTMIIGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + AKA + ++ ++ + + + Sbjct: 123 IPQTEQFARDMRAKALSGGSILSIKNGVWAKDGHHFVFVRRVTDDTKLDDIYIYTFEQQH 182 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 K+ +A S D L + + +++ + L+ Sbjct: 183 NLIKLKHANQASYSEDEAKWTLRQVNHSTITKDEIITTNHLSETWETSLTPDKLGAVSLR 242 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 ++S L + + + + + F +++ Q + + L+++ Sbjct: 243 PTSLSISGLYH-YISFLRETGQDVSRFELTFWRKIFQPVSVGVMMLLALSFIFGSLRSVT 301 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I + F V + P L L I I+ L+ +K+ Sbjct: 302 AGARIVTGICVGFLFYVVNEILGQTSVVYGIPAIFGALIPSLLFIVMIWWLLSRKR 357 >gi|86605800|ref|YP_474563.1| YjgP/YjgQ family protein [Synechococcus sp. JA-3-3Ab] gi|86554342|gb|ABC99300.1| putative membrane protein, YjgP/YjgQ family [Synechococcus sp. JA-3-3Ab] Length = 376 Score = 117 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 57/356 (16%), Positives = 124/356 (34%), Gaps = 16/356 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 E Y+ + L + ++ + + +L++ +P ++ Sbjct: 10 LLERYLFGQMLTPVLAGIAGGTLLLLAGRLFTLAERLVEGSVPPLTVLRLLILDLPEMVL 69 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P T L ++ N+E+ + G + +P+L + +L+S+ F N++ Sbjct: 70 LGMPIAAFFATMLTLGKLSGNSEITAMRAAGIPFTRIFRPLLLVGLLMSLSAFWISNVLL 129 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRL------DDDLYIKISKYNPNNTLQGIFIV 176 P + I+Q+ +A LA + ++ ++FFR +D+L+ I + +P + Sbjct: 130 PASKREIRQIDQQALLARATTPVQYDVFFRTARVGGTEDNLWFFIRQVDPRLNTMQDVTI 189 Query: 177 DSRDTQTHKIYYAQS----GSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 D Y + L++G HR P ++ F L+ Sbjct: 190 LQVDPLPGGKYQLAEVTLAAQAVWNGLDWTLSEGVTHRYGPDGLSLAEEPFDRKPLEVSQ 249 Query: 233 A--NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 + N+ +L L + + R+EFH R + L LIS+ Sbjct: 250 DLAALMQPPVPPNELSLPEL-AERISRLARSNLNTQPLRTEFHMRFSLPLASFFAVLISL 308 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCI 346 R+ + + + + F + S + + + P + F I Sbjct: 309 PLG--STTARRVGRYGGVVFGILLVFAYYVVLS-VSRSLGEAGALPPWAAAWSFNI 361 >gi|258622809|ref|ZP_05717827.1| Predicted permease [Vibrio mimicus VM573] gi|258584997|gb|EEW09728.1| Predicted permease [Vibrio mimicus VM573] Length = 356 Score = 117 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 47/355 (13%), Positives = 122/355 (34%), Gaps = 2/355 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I + + + V ++ +I+ ++++ V + L L IP + Sbjct: 3 KILDWYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGEGSYDLLQALLFVVLSIPRDV 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L ++ ++EL+++ G S++ + VL AI L I + + Sbjct: 63 EMFFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIVVTLLGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + + + + D + +I I K + + Sbjct: 123 APQAQ-KLARDMRAFATSGGAIMSVRTGVWARDANDFIFIGKVDNEQLIGMNLWRFDEHK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + + +A+ + + ++ + + I + + + + +K Sbjct: 182 KLSTVIFAEQVDYVGNNEWLMKDAQLTRMVNEIEISKDTLPEYRWRTSLAPDKLAVVTVK 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + +LS L + + + Y F +++TQ + + L+++ Sbjct: 242 PEELSLSGL-SDYVHYLKASEQDSSRYELAFWRKMTQPISIAVMMLMALSFIFGPLRSVT 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + +F + F + + P + L ++ L+ +K Sbjct: 301 MGARILSGVIAGFTFYISSEFFGPLSLVYGLPPLFGAVAPSLVFLAIALGLLGRK 355 >gi|150021419|ref|YP_001306773.1| permease YjgP/YjgQ family protein [Thermosipho melanesiensis BI429] gi|149793940|gb|ABR31388.1| permease YjgP/YjgQ family protein [Thermosipho melanesiensis BI429] Length = 1096 Score = 117 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 56/356 (15%), Positives = 122/356 (34%), Gaps = 5/356 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ YIL+ F+M V A V + Q +++ + L ++ Y +P Sbjct: 1 MRVLTKYILKLSIGPFIMGVAAFVLFASVELLYQLSDIIVRHRVGILKLFELIYYNLPYF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P VL+ + + E+ + G L+ P L++L +F F + Sbjct: 61 VSMGIPVGVLFSIFWVLSQLYSSKEITAMLVHGIPSRKLVYPFFLLSVLFGLFAFYLNDQ 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + +K + EN+ ++D+ Y + +Y+ ++ + ++ Sbjct: 121 MVPTFNHKAMKTISKYVYKRPEISIRENVLTKIDESQYFFVKRYDQSSGILYDVVLFQHI 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSSTI 238 +I A+ + D L +G+++ + F +L + + + Sbjct: 181 QGEERIITAEK--VQKDEGKWFLINGKMYVTDKDGFLKFDVNFSKISLDLKDDLESLMRV 238 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 D L N + E H R + P I ++ + + L Sbjct: 239 GKSPRDMTGDELKNKIKTFRKL-GVDPSPWIVELHGRYANSVGPFIITILGVPLSLLFGL 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + + F + + G S + + NP +F +FL ++ Sbjct: 298 KSKSWSVIFTFAIVILYQGSGAWISAMGKENLLNPVLAAWFPNLVFISVGLFLFLM 353 >gi|52842835|ref|YP_096634.1| permease [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629946|gb|AAU28687.1| permease [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 356 Score = 117 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 42/356 (11%), Positives = 104/356 (29%), Gaps = 3/356 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI + + + + L +V + I + +I+ + + + +P + Sbjct: 4 KILDRYIAKTVLSAIGLVTLMLVGLQIFILFVNQIDDLGRADYGIVQAGVFVLLQMPYQV 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L + ++EL+++ G S + VL ++++ + + I Sbjct: 64 YLFFPIASLLGCLVGLGVLANHSELVVMRAAGISIGQITGAVLKASLIVILLITSLGETI 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + A ++ R +D S + N Sbjct: 124 VPVMAHYANEYKVSALTGGQALLTPRGVWVRNGNDFVSIASVTHENTLRYVNQFRFDNQH 183 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + + I D + + + + + Sbjct: 184 NLKLARQISEVKYVNN--SWIAYDVKQTEFAEDHTKAHHFDTLPWDVPVKPEILKITGTN 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 ++ L L N + + Y+ F +R+TQ L ++ +++I Sbjct: 242 PDEMTLHEL-NRYLREQQRNHQNVANYKFAFFQRITQPLNTMVMMILAIPFIFGPLRSST 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + F + F + + Q P + L LM + + Sbjct: 301 MGSKLLVGAMVGFGFHILNRFFGPVSTVFQWPPELAAFSPTLIFSLIGIYLMRRVR 356 >gi|289623814|ref|ZP_06456768.1| hypothetical protein PsyrpaN_01505 [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|298485820|ref|ZP_07003898.1| putative membrane protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298159644|gb|EFI00687.1| putative membrane protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330867847|gb|EGH02556.1| hypothetical protein PSYAE_11466 [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330890524|gb|EGH23185.1| hypothetical protein PSYMO_17663 [Pseudomonas syringae pv. mori str. 301020] gi|330989712|gb|EGH87815.1| hypothetical protein PLA107_32131 [Pseudomonas syringae pv. lachrymans str. M301315] gi|331009019|gb|EGH89075.1| hypothetical protein PSYTB_04820 [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 353 Score = 117 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 47/355 (13%), Positives = 110/355 (30%), Gaps = 4/355 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + + L I+ + + + + + S T +L L P Sbjct: 1 MVKLDRYIGKSVLLAILAVLGIILGLVSLFAFIDEMGDI-SDTYTLADALSYVMLTAPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ ++EL I+ G S ++ V+ +LL + + Sbjct: 60 VYDTLPMAALIGCLIGLGTLASSSELTIMRAAGVSIGRIVWAVMKPMLLLMVAGVLVGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + AQ + L+ R D+ + L Sbjct: 120 VAPYAENQAQAARSLAQGSGDAQSARHGLWHRQGDEFIHINTVQPNGLMLGVTRYRFDDQ 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 +A+ + D L D + ++ + + + ST+++ Sbjct: 180 RHMLTSSFAKEANFKTD--YWELKDVSTTHFNDGRTEVINTPVERWDVALSPQLLSTVIM 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 ++S L N + + Y F ++ Q V L++I Sbjct: 238 PPESLSISGLWN-YAHYLADQGLSNGRYWLAFWTKVLQPAVTVALVLMAISFIFGPLRSV 296 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + + +F + + P + +L C + L+ + Sbjct: 297 TLGQRVFTGVVVGFTFRIIQDLLGPSSLLFGFPPLLAVLMPAAACALAGVYLLRR 351 >gi|294507117|ref|YP_003571175.1| conserved hypothetical protein, membrane [Salinibacter ruber M8] gi|294343446|emb|CBH24224.1| conserved hypothetical protein, membrane [Salinibacter ruber M8] Length = 410 Score = 117 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 43/365 (11%), Positives = 123/365 (33%), Gaps = 12/365 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK-ISGYLIPT 59 M +FE +I++ + + F++ ++ V+ ++ + ++ + +P Sbjct: 50 MSTFERHIIKRLLKGFVLFVGALLVFFIVLHWVEYSDDFLDGGATIWEVFTVFYPNYVPE 109 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ + +P + + ++ + +L+ + +G S L++P L + +L+++F+F Sbjct: 110 IIRLTSPLALFLSCIYLTGTLAQELQLVALQTSGVSLYQLMRPYLGVGLLVTVFMFGFNG 169 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + PK + + + S + R + + + Y+ + + Sbjct: 170 WVVPKTNEVVVRYENEYLPGNQKSVQTSEIHRRNGPNSILSVGYYDADRERAHTVSLQQL 229 Query: 180 DTQTHKIYYAQSGSIDLDR--QAIILNDGEVHRKSPI-SKDISIMKFKSYTLQTESANSS 236 + ++ D + L+D ++ + TLQ + + Sbjct: 230 AGDARLARRVDANRMEWDDSLEVWRLDDVTRRTFVKGETQRKRTIASLDTTLQVYPRDLA 289 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L ++ + ++ LI + A Sbjct: 290 RSKNDVAAMTIPAAAEYLAALRRSGVGGLTRPLVAYYNKFAYPFANLLLVLIGVPIA--- 346 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL----FCISSIFLL 352 + R+ + I L I+F V+ + + P +L F + ++ +L Sbjct: 347 STRRRGGQAVRFAIGLLIAF-VYLSVQKLAEPLGYAGTLSPAWTAWLPHLTFAVVALLVL 405 Query: 353 MIKKK 357 +K Sbjct: 406 WWARK 410 >gi|289649165|ref|ZP_06480508.1| hypothetical protein Psyrpa2_15669 [Pseudomonas syringae pv. aesculi str. 2250] Length = 353 Score = 117 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 47/356 (13%), Positives = 110/356 (30%), Gaps = 4/356 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + + L I+ + + + + + S T +L L P Sbjct: 1 MVKLDRYIGKSVLLAILAVLGIILGLVSLFAFIDEMGDI-SDTYTLADALSYVMLTAPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ ++EL I+ G S ++ V+ +LL + + Sbjct: 60 VYDTLPMAALIGCLIGLGTLASSSELTIMRAAGVSIGRIVWAVMKPMLLLMVAGVLVGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + AQ + L+ R D+ + L Sbjct: 120 VAPYAENQAQAARSLAQGSGDAQSARHGLWHRQGDEFIHINTVQPNGLMLGVTRYRFDDQ 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 +A+ + D L D + ++ + + + ST+++ Sbjct: 180 RHMLTSSFAKEANFKTD--YWELKDVSTTHFNDGRTEVINTPVERWDVALSPQLLSTVIM 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 ++S L N + + Y F ++ Q V L++I Sbjct: 238 PPESLSISGLWN-YAHYLADQGLSNGRYWLAFWTKVLQPAVTVALVLMAISFIFGPLRSV 296 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + + +F + + P + +L C + L+ + Sbjct: 297 TLGQRVFTGVVVGFTFRIIQDLLGPSSLLFGFPPLLAVLMPAAACALAGVYLLRRS 352 >gi|301060831|ref|ZP_07201645.1| permease, YjgP/YjgQ family [delta proteobacterium NaphS2] gi|300445080|gb|EFK09031.1| permease, YjgP/YjgQ family [delta proteobacterium NaphS2] Length = 383 Score = 117 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 63/365 (17%), Positives = 145/365 (39%), Gaps = 16/365 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + YI R I +FL S +FI ++L L+ + L+ + + +LIP +L Sbjct: 2 TLYRYIFREIWPTFLASLFVFIFIMMAARMLSITELIVTRGVHLSQVAGMVLFLIPDILT 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P M ++ ++E++ + ++G S ++ PV+F ++ + Sbjct: 62 FALPAVTLMSVVVAFLRLSADSEIIAMKSSGISLYQMLPPVIFFSLAACLACVAISTFAA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTL-QGIFIVDSRDT 181 P + K L K ++E +F ++L ++ ++ + + +F+VD RD Sbjct: 122 PWGNRSFKDLLFKIAETKADLGIKERIFCEPFENLVFYVNSFSREERMLKDVFVVDRRDQ 181 Query: 182 QTHKIYYAQSGSIDLDR----QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA---- 233 + + I ++ G + + +KF +Y L Sbjct: 182 EMTNTIVSDEAQIIPRPAERTITLLFLKGTIFMVEKNFEGSRTIKFNTYALNIGLKDVLA 241 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + ++ ++ +++ L++ + PN E R E ++L+ L G+I + Sbjct: 242 DLASRKKAPHELSVNQLISKLKSTPNTDKEYSRIMR-ELLEKLSIPLAVFFMGIIGVPL- 299 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--FCISSIFL 351 A +R R + + +SL + F +++ F II I P +++ + + Sbjct: 300 --GAQIRGRGRSAGVGVSLVV-FALYYLFLMIIRSIASTGALSPAFAVWIPDLFLIVSVV 356 Query: 352 LMIKK 356 ++++ Sbjct: 357 YLLRR 361 >gi|71737643|ref|YP_273426.1| hypothetical protein PSPPH_1159 [Pseudomonas syringae pv. phaseolicola 1448A] gi|71558196|gb|AAZ37407.1| membrane protein, putative [Pseudomonas syringae pv. phaseolicola 1448A] gi|320322887|gb|EFW78978.1| hypothetical protein PsgB076_20532 [Pseudomonas syringae pv. glycinea str. B076] gi|320329804|gb|EFW85792.1| hypothetical protein PsgRace4_11126 [Pseudomonas syringae pv. glycinea str. race 4] Length = 353 Score = 117 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 46/355 (12%), Positives = 110/355 (30%), Gaps = 4/355 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + + L I+ + + + + + S T +L L P Sbjct: 1 MVKLDRYIGKSVLLAILAVLGIILGLVSLFAFIDEMGDI-SDTYTLADALSYVMLTAPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ ++EL I+ G S ++ V+ +LL + + Sbjct: 60 VYDTLPMAALIGCLIGLGTLASSSELTIMRAAGVSIGRIVWAVMKPMLLLMVAGVLVGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + AQ + L+ R ++ + L Sbjct: 120 VAPYAENQAQAARSLAQGSGDAQSARHGLWHRQGEEFIHINTVQPNGLMLGVTRYRFDDQ 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 +A+ + D L D + ++ + + + ST+++ Sbjct: 180 RHMLTSSFAKEANFKTD--YWELKDVSTTHFNDGRTEVINTPVERWDVALSPQLLSTVIM 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 ++S L N + + Y F ++ Q V L++I Sbjct: 238 PPESLSISGLWN-YAHYLADQGLSNGRYWLAFWTKVLQPAVTVALVLMAISFIFGPLRSV 296 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + + +F + + P + +L C + L+ + Sbjct: 297 TLGQRVFTGVVVGFTFRIIQDLLGPSSLLFGFPPLLAVLMPAAACALAGVYLLRR 351 >gi|119486322|ref|ZP_01620381.1| hypothetical protein L8106_16749 [Lyngbya sp. PCC 8106] gi|119456535|gb|EAW37665.1| hypothetical protein L8106_16749 [Lyngbya sp. PCC 8106] Length = 392 Score = 117 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 55/367 (14%), Positives = 137/367 (37%), Gaps = 21/367 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQ-ILQRINLVSSSTESLNILLKISGYLIPT 59 + + YI+ + FL +A I + + V+ S + I ++I +P Sbjct: 19 LSILDRYIISELIAPFLFGVGLFTSVALSIDTVFDLVRKVAESGLDVGIAMQIFLLKMPE 78 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + + P + T V M+ ++E++ + + G S L+ P L ++ ++ +F+ Sbjct: 79 FVVLSFPMSMVLTTLIVYGRMSSDSEIVALRSCGISIYRLVIPTLIFSLFITASMFVFNE 138 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-------------YIKISKYNP 166 +I P +A EEN+F+ + + ++ Sbjct: 139 LIVPATNYRASITLEQALHQDRLPVQEENIFYPEYRTIPIEDSDEEITILVRLFYAQEFD 198 Query: 167 NNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSY 226 + + I+D +I ++S + +Q+ DG V+ P +I++F Sbjct: 199 GKYMNEVTILDKSQQGITQIISSESAVWNGKQQSWDFFDGTVYMIDPKGSYRNIIRFDHK 258 Query: 227 TLQTE--SANSSTIVLKANDQNLSFLLNPNPNNPNY-RPELLETYRSEFHKRLTQWLFPV 283 L+ + ++ + ++ N+ + ++++ + ++ + V Sbjct: 259 ELKLPRVPLDLASRKRRYDEMNIVQAHEYLELMKSSGNEKIVQKTKVRIQQKYSLPFVCV 318 Query: 284 IFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 +FGL+ + ++ + IS+ I F ++ ++I + Q P L +L Sbjct: 319 VFGLLGAAL---GSQHQRTNRSTSFGISIVIIFS-YYMLAFITGAMGQKAIISPFLAGWL 374 Query: 344 FCISSIF 350 + + Sbjct: 375 PIVIGLG 381 >gi|16330198|ref|NP_440926.1| hypothetical protein slr0882 [Synechocystis sp. PCC 6803] gi|1652686|dbj|BAA17606.1| slr0882 [Synechocystis sp. PCC 6803] Length = 394 Score = 117 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 45/366 (12%), Positives = 125/366 (34%), Gaps = 20/366 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPT 59 + + Y+ + F+ +A + + + V+ S ++I +KI +P Sbjct: 20 LSVMDRYLFVELFLPFIFGMGMFTSLALSIGTLFDLVRRVTESGLPMDIAVKILFLKMPE 79 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + + P + + + ++ ++EL+ + + G S L+ P L I+++ F+ + Sbjct: 80 FVVLAFPMSMLLASLMAYSRLSSDSELIALRSIGVSIYRLVVPALLFGIVVTGIAFVFND 139 Query: 120 IIEPKCRSTIK------------QLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN 167 I P + + + + + + + ++ Sbjct: 140 RITPAASYEALATLDRAIHQDRPPRQEQNIIYPEYGMVRQPDGNEKNILKRLFYAEEFNG 199 Query: 168 NTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 + ++G+ I+D + +++ A+ S ++ DG V+ +P +I++F+ Sbjct: 200 SEMKGLTILDRTQSGVNQVLTAERASWNISENTWDFYDGTVYLIAPDGSYRNIVRFRHQQ 259 Query: 228 LQTE--SANSSTIVLKANDQNLSFLLNPNPN-NPNYRPELLETYRSEFHKRLTQWLFPVI 284 L + ++ K + ++ + + + K+ + Sbjct: 260 LALPRAPLDLASQERKDGEMTIAQSRRYLEVLRLSGDDKKVRKLEVRIQKKYALPFVCFV 319 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 FGLI + K I + + F ++ S++ + P +L Sbjct: 320 FGLIGAAIGVRPQNT---NKATSFGICVGLIFF-YYLLSFLSESMGIWGALDPFTAAWLP 375 Query: 345 CISSIF 350 + Sbjct: 376 NFLGLI 381 >gi|229527564|ref|ZP_04416956.1| hypothetical protein VCG_000633 [Vibrio cholerae 12129(1)] gi|229335196|gb|EEO00681.1| hypothetical protein VCG_000633 [Vibrio cholerae 12129(1)] gi|327484987|gb|AEA79394.1| Predicted Permease [Vibrio cholerae LMA3894-4] Length = 356 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 45/355 (12%), Positives = 121/355 (34%), Gaps = 2/355 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I + + + V ++ +I+ ++++ V + L L IP + Sbjct: 3 KILDWYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGEGSYDLLQALLFVVLSIPRDV 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L ++ ++EL+++ G S++ + VL AI L I + + Sbjct: 63 EMFFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIIVTLLGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + + + + D + +I I+K + Sbjct: 123 APQAQ-KMARDMRAFATSGGAIMSVRTGVWARDANDFIFIAKVENEQLYGLNLWRFDENK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + + +++ + + ++ + + I + + + + +K Sbjct: 182 KLSTVIFSEQVDYVANNEWLMKDAVLTRLVNDIEISKESLPEYRWRTSLAPDKLAVVTVK 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + +L+ L + + + Y +++TQ + + L+++ Sbjct: 242 PEELSLTGL-SDYVHYLKASEQDTSRYELALWRKVTQPISIAVMMLMALSFIFGPLRSVT 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + +F + F + + P L L ++ L+ +K Sbjct: 301 MGARILSGVIAGFTFYISSEFFGPLSLVYGLPPLFGALAPSLVFLAIALGLLGRK 355 >gi|126667525|ref|ZP_01738495.1| predicted Permease [Marinobacter sp. ELB17] gi|126627951|gb|EAZ98578.1| predicted Permease [Marinobacter sp. ELB17] Length = 382 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 48/375 (12%), Positives = 126/375 (33%), Gaps = 29/375 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + Y++R I S + ++ + + L+ + + S +L + Y P Sbjct: 13 LTIIFRYLIRQIMISMIAVSTILLMVFMSGRFLKYLGNAAEGEISAGVLFSVMAYRFPGF 72 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + M +E+ ++ G S +++ L ++ + + + Sbjct: 73 LELILPLGLFIGILLAYGRMYLESEMTVLLACGVSEGDILRQTLIGSLPVMLVVAAMSLY 132 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRL--DDDLYIKISKYNPNNTLQGIFIVDS 178 + P ++++ + + A F L F + + LQG+FI + Sbjct: 133 VSPWGMKQVEEIFNEQRKATEFELLAPGRFQDFTSGGRVTYTEGLSDDKRELQGVFIAEF 192 Query: 179 RDTQTHKIYYAQS-----GSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 + +IL +G + + D + +F++Y L+ S Sbjct: 193 GKNGEGLTIITAETGTQLVDAQTGSRFLILKNGGRYAGNAGQLDYNTTEFEAYGLKIVSG 252 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 S T L+ + L+ R+ H R + + L+++ Sbjct: 253 KSGTKELEEG-LSTGQLM----------KSNDPQQRALLHWRFSLPFIVPVVTLLAVRL- 300 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLF-LFCISSIF 350 + ++ + + ++ + + + P +I + ++ LF ++ Sbjct: 301 --SRVNPRQGRFFHLLPAMLVYITYLGLLIVARDALADGKVPEWIGMFWVHGLFLALGLW 358 Query: 351 L-----LMIKKKYTK 360 L + K++ + Sbjct: 359 LQFGPAWLRKRRLQR 373 >gi|147674275|ref|YP_001217997.1| hypothetical protein VC0395_A2081 [Vibrio cholerae O395] gi|153215714|ref|ZP_01950095.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|153831207|ref|ZP_01983874.1| putative membrane protein [Vibrio cholerae 623-39] gi|229513426|ref|ZP_04402890.1| hypothetical protein VCB_001071 [Vibrio cholerae TMA 21] gi|229524482|ref|ZP_04413887.1| hypothetical protein VCA_002077 [Vibrio cholerae bv. albensis VL426] gi|254291417|ref|ZP_04962209.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|297581346|ref|ZP_06943269.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|124114632|gb|EAY33452.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|146316158|gb|ABQ20697.1| putative membrane protein [Vibrio cholerae O395] gi|148873314|gb|EDL71449.1| putative membrane protein [Vibrio cholerae 623-39] gi|150422607|gb|EDN14562.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|227014389|gb|ACP10599.1| putative Inner membrane protein [Vibrio cholerae O395] gi|229338063|gb|EEO03080.1| hypothetical protein VCA_002077 [Vibrio cholerae bv. albensis VL426] gi|229349303|gb|EEO14259.1| hypothetical protein VCB_001071 [Vibrio cholerae TMA 21] gi|297534184|gb|EFH73022.1| conserved hypothetical protein [Vibrio cholerae RC385] Length = 356 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 45/355 (12%), Positives = 121/355 (34%), Gaps = 2/355 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I + + + V ++ +I+ ++++ V + L L IP + Sbjct: 3 KILDWYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGEGSYDLLQALLFVVLSIPRDV 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L ++ ++EL+++ G S++ + VL AI L I + + Sbjct: 63 EMFFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIIVTLLGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + + + + D + +I I+K + Sbjct: 123 APQAQ-KMARDMRAFATSGGAIMSVRTGVWARDANDFIFIAKVENEQLYGLNLWRFDENK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + + +++ + + ++ + + I + + + + +K Sbjct: 182 KLSTVIFSEQVDYVANNEWLMKDAVLTRLVNDIEISKESLPEYRWRTSLAPDKLAVVTVK 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + +L+ L + + + Y +++TQ + + L+++ Sbjct: 242 PEELSLTGL-SDYVHYLKASEQDSSRYELALWRKVTQPISIAVMMLMALSFIFGPLRSVT 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + +F + F + + P L L ++ L+ +K Sbjct: 301 MGARILSGVIAGFTFYISSEFFGPLSLVYGLPPLFGALAPSLVFLAIALGLLGRK 355 >gi|120553894|ref|YP_958245.1| permease YjgP/YjgQ family protein [Marinobacter aquaeolei VT8] gi|120323743|gb|ABM18058.1| permease YjgP/YjgQ family protein [Marinobacter aquaeolei VT8] Length = 367 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 64/375 (17%), Positives = 144/375 (38%), Gaps = 29/375 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y++R I S L ++ + + ++ + + + +L I GY P Sbjct: 1 MSIIFRYLIRQIMVSMLAVSGILLLVFMSGRFIKYLADAAEGEIAAGVLFAIMGYRFPGF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + M +E+ ++ G S L+ L A+ + + + + Sbjct: 61 LELILPLGLFIGILLAYGRMYLESEMTVLFACGVSEKQLLAKTLLGALPVMLVVGVMSLY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRL--DDDLYIKISKYNPNNTLQGIFIVDS 178 I P ++ + + + A F L F D + + + LQG+FI + Sbjct: 121 ISPWGMKQVEHIFNEQRKATEFEMLAPGRFQDFTSGDRVTYTEALSDDKRQLQGVFIAEY 180 Query: 179 RDTQTHKI-YYAQSGSIDLDR----QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 A+SGS +D + ++L DG + +P D ++ +F++Y L+ S Sbjct: 181 DKDGKGVTLITAESGSQFIDEETGSRFLVLEDGGRFQGAPGRLDYNVTEFEAYGLKIVSG 240 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + K ++ LS L N +NP R+ H R++ L I L+++ Sbjct: 241 QEGS---KELEEGLSTLALWNSDNPED--------RALLHWRISLPLIVPIVTLLAVRL- 288 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIE--QNPYYIPILYLF-LFCISSIF 350 + ++ + + ++ + + + P ++ +L++ LF ++ Sbjct: 289 --SRVNPRQGRFFHLLPAMLVYITYLGLLIVARDALADEKVPEWVGMLWVHALFLALGLW 346 Query: 351 L-----LMIKKKYTK 360 L + +++ + Sbjct: 347 LQFGPGWLNRRRLER 361 >gi|68250306|ref|YP_249418.1| permease [Haemophilus influenzae 86-028NP] gi|145633638|ref|ZP_01789365.1| predicted permease [Haemophilus influenzae 3655] gi|148825754|ref|YP_001290507.1| leucyl aminopeptidase [Haemophilus influenzae PittEE] gi|229847324|ref|ZP_04467426.1| leucyl aminopeptidase [Haemophilus influenzae 7P49H1] gi|68058505|gb|AAX88758.1| predicted permease [Haemophilus influenzae 86-028NP] gi|144985515|gb|EDJ92331.1| predicted permease [Haemophilus influenzae 3655] gi|148715914|gb|ABQ98124.1| leucyl aminopeptidase [Haemophilus influenzae PittEE] gi|229809749|gb|EEP45473.1| leucyl aminopeptidase [Haemophilus influenzae 7P49H1] Length = 358 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 48/356 (13%), Positives = 117/356 (32%), Gaps = 1/356 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + YI + I + + + +V ++ +I+ +++ V T + + +G IP + Sbjct: 3 NTLDRYIGKSILGTIFATLMTLVGLSAIIKFVEQFRSVGKGTYDIWQAVIFTGLTIPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + L ++ +EL+I+ + G SR + V+ A+ L +F I Sbjct: 63 ETFFPMAALLGALIALGNLASRSELVIMQSAGFSRFKIGIAVMKTALPLVVFTMIIGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + AKA + ++ ++ + + + Sbjct: 123 IPQTEQFARDMRAKALSGGSILSIKNGVWAKDGHHFVFVRRVTDDTKLDDIYIYTFDQQH 182 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 K+ +A S D L + +++ + L+ Sbjct: 183 NLIKLKHANQASYSEDEAKWTLRQVNHSTIMKDEIITTNHLSETWETSLTPDKLGAVSLR 242 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 ++S L + + + + + F +++ Q + + L+++ Sbjct: 243 PTSLSISGLYH-YISFLRETGQDVSRFELTFWRKIFQPVSVGVMMLLALSFIFGSLRSVT 301 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I + F V + P L L I I+ L+ +K+ Sbjct: 302 AGARIVTGICVGFLFYVVNEILGQTSVVYGIPAIFGALIPSLLFIVMIWWLLSRKR 357 >gi|293390145|ref|ZP_06634479.1| conserved permease [Aggregatibacter actinomycetemcomitans D7S-1] gi|290950679|gb|EFE00798.1| conserved permease [Aggregatibacter actinomycetemcomitans D7S-1] Length = 355 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 43/357 (12%), Positives = 118/357 (33%), Gaps = 3/357 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + E YI + I + + L +V ++ +I+ +++ V T + + + +P Sbjct: 1 MNTLERYIGKSILGTIFATLLMLVGLSAIIKFVEQFRSVGKGTYDILQAIAYTVLTMPKD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ +EL+++ ++G SR+ + V+ + L + + Sbjct: 61 VETFFPMAALLGALIALGNLASRSELVVMQSSGFSRMRIGFAVMKTTLPLVLLTMVIGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + ++ +N + D + ++ + + + L I+I Sbjct: 121 GIPQT-EQFARDMRSKAISGGSMLSVKNGIWAKDGNNFVYVRRITDDVELNDIYIYTFN- 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 Q + + L + R P + + + + L Sbjct: 179 EQRQLEKLKHANRATFNSGKWTLQQAKESRIQPENIQTTNRLNEEWQTNLTPDKLGVASL 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + ++S L N + + + + ++L Q + + ++++ Sbjct: 239 RPTSLSISGLSN-YITFLRETGQDSKNFELTYWRKLFQPISVGVMMMLALSFIFGPLRSV 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I I F V + I L + + + L+ +++ Sbjct: 298 TAGARILIGICFGFLFYVVNELFGKFSLVYNTTPLIGALMPSVLFLIITWWLLARRR 354 >gi|262166530|ref|ZP_06034267.1| putative membrane protein [Vibrio mimicus VM223] gi|262026246|gb|EEY44914.1| putative membrane protein [Vibrio mimicus VM223] Length = 356 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 46/355 (12%), Positives = 122/355 (34%), Gaps = 2/355 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I + + + V ++ +I+ ++++ V + L L IP + Sbjct: 3 KILDWYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGEGSYDLLQALLFVVLSIPRDV 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L ++ ++EL+++ G S++ + VL AI L + + + Sbjct: 63 EMFFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMVVVTLLGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + + + + D + +I I K + + Sbjct: 123 APQAQ-KLARDMRAFATSGGAIMSVRTGVWARDANDFIFIGKVDNEQLIGMNLWRFDEHK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + + +A+ + + ++ + + I + + + + +K Sbjct: 182 KLSTVIFAEQVDYVGNNEWLMKDAQLTRMVNEIEISKDTLPEYRWRTSLAPDKLAVVTVK 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + +LS L + + + Y F +++TQ + + L+++ Sbjct: 242 PEELSLSGL-SDYVHYLKASEQDSSRYELAFWRKMTQPISIAVMMLMALSFIFGPLRSVT 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + +F + F + + P + L ++ L+ +K Sbjct: 301 MGARILSGVIAGFTFYISSEFFGPLSLVYGLPPLFGAVAPSLVFLTIALGLLGRK 355 >gi|16273590|ref|NP_439845.1| hypothetical protein HI1703 [Haemophilus influenzae Rd KW20] gi|260581044|ref|ZP_05848866.1| conserved hypothetical protein [Haemophilus influenzae RdAW] gi|1176473|sp|P45332|LPTG_HAEIN RecName: Full=Lipopolysaccharide export system permease protein lptG gi|1574557|gb|AAC23349.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20] gi|260092284|gb|EEW76225.1| conserved hypothetical protein [Haemophilus influenzae RdAW] Length = 358 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 48/356 (13%), Positives = 116/356 (32%), Gaps = 1/356 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + YI + I + + + +V ++ +I+ +++ V T + + +G IP + Sbjct: 3 NTLDRYIGKSILGAIFATLMTLVGLSAIIKFVEQFRSVGKGTYDIWQAVIFTGLTIPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + L ++ +EL+I+ + G SR + V+ A+ L +F I Sbjct: 63 ETFFPMAALLGALIALGNLASRSELVIMQSAGFSRFKIGIAVMKTALPLVVFTMIIGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + AKA + ++ ++ + + + Sbjct: 123 IPQTEQFARDTRAKALSGGSILSIKNGVWAKDGHHFVFVRRVTDDTKLDDIYIYTFDQQH 182 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 K+ +A S D L + +++ + L+ Sbjct: 183 NLIKLKHANQASYSEDEAKWTLRQVNHSTIMKDEIITTNHLSETWETSLTPDKLGAVSLR 242 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 ++S L + + + + + F +++ Q + + L+++ Sbjct: 243 PTSLSISGLYH-YISFLRETGQDVSRFELTFWRKIFQPVSVGVMMLLALSFIFGSLRSVT 301 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I + F V + P L L I I+ L+ +K+ Sbjct: 302 AGARIVTGICVGFLFYVVNEILGQTSVVYGIPAIFGALIPSLLFIVMIWWLLSRKR 357 >gi|262170558|ref|ZP_06038236.1| putative membrane protein [Vibrio mimicus MB-451] gi|261891634|gb|EEY37620.1| putative membrane protein [Vibrio mimicus MB-451] Length = 356 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 47/355 (13%), Positives = 122/355 (34%), Gaps = 2/355 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I + + + V ++ +I+ ++++ V + L L IP + Sbjct: 3 KILDWYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGEGSYDLLQALLFVVLSIPRDV 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L ++ ++EL+++ G S++ + VL AI L I + + Sbjct: 63 EMFFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIVVTLLGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + + + + D + +I I K + + Sbjct: 123 APQAQ-KLARDMRAFATSGGAIMSVRTGVWARDANDFIFIGKVDNEQLIGMNLWRFDEHK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + + +A+ + + ++ + + I + + + + +K Sbjct: 182 KLSTVIFAEQVDYVGNNEWLMKDAQLTRMVNEIEISKETLPEYRWRTSLAPDKLAVVTVK 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + +LS L + + + Y F +++TQ + + L+++ Sbjct: 242 PEELSLSGL-SDYVHYLKASEQDSSRYELAFWRKMTQPISIAVMMLMALSFIFGPLRSVT 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + +F + F + + P + L ++ L+ +K Sbjct: 301 MGARILSGVIAGFTFYISSEFFGPLSLVYGLPPLFGAVAPSLVFLTIALGLLGRK 355 >gi|90411865|ref|ZP_01219873.1| putative permease [Photobacterium profundum 3TCK] gi|90327123|gb|EAS43495.1| putative permease [Photobacterium profundum 3TCK] Length = 356 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 53/355 (14%), Positives = 124/355 (34%), Gaps = 2/355 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I + ++ +V ++ +I+ ++++ + T L L IP + Sbjct: 3 KILDWYIGRTIIATTALTLSTLVGLSAIIKYVEQLRKIGDGTYDLWKALIYVLLSIPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++ + VL A+ L + + + Sbjct: 63 EMFFPMAVLLGALIGLGMLASSSELVVMQAAGFSKLDIGLSVLKTAVPLMLIVMVLGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + + ++ + D + +I I + + +TL + I D Sbjct: 123 APQAQ-KSARELRAIWTSGGNMLSVQSGVWAKDGNDFIYIGRVHEQSTLNAVNIWQFDDE 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 T + D Q +L D V S I + + + + + +K Sbjct: 182 DTLSKMVFAKSASFTDEQGWLLADVTVTNISKIQQTNTKFDTLPWKTSLSPDKLAIVTVK 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + LS + + + + Y F ++L Q + + L+++ Sbjct: 242 PEELALSGVYD-YVSYLKESKQDASRYELAFWRKLLQPISIAVMMLLALSFVFGPLRSVT 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + +F + + + + I L L + L+ +K Sbjct: 301 MGARVLSGVIFGFTFYISNEVFGPMSLVYRLHPAIGALGPSLVFLLITIYLLRRK 355 >gi|88810479|ref|ZP_01125736.1| putative permease [Nitrococcus mobilis Nb-231] gi|88792109|gb|EAR23219.1| putative permease [Nitrococcus mobilis Nb-231] Length = 358 Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats. Identities = 56/360 (15%), Positives = 122/360 (33%), Gaps = 4/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI R + L+ L IV + + L+ ++ + L P Sbjct: 1 MKLIDRYIARNVTAGTLIVLLVIVSLDLLFNFLKESQDSGQGDYTVWLALLYVLLTTPYS 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 PF + + L + +EL+++ TG S +T+ +P++ + L++ Sbjct: 61 AYQAFPFATLIGSLIGLGGLAARSELVVMRGTGMSALTIARPLVMAGLSLALLAMGVGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ +L +A + E+ F+ D D Y+ + + L+ + I + Sbjct: 121 LAPRTDRLATELQTRAVGGQLSAG-GESGFWARDGDRYVHARQVPEADVLEDLQIYAFQG 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + I A ++L H + S +S Y + + +V+ Sbjct: 180 VRLDHITTAWRAHY-EQGVWMLLAPVTTHFAADGSVRVSRAASARYRSELKPDMLDVVVV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + ++ L YR F ++ L V L+++ Sbjct: 239 EPEVLPITQL-WIYTRYLERNGLDSSRYRLAFWVKVATPLATVTMLLLTVPLVFGSLRSA 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL-YLFLFCISSIFLLMIKKKYT 359 + I + + I+F + + P + L LF ++ L+ + + Sbjct: 298 NMGQRIFIGVLIGIAFFLLNRLLNRAAMVFGLPPLVSALGPTVLFLGIALGSLVRLSRRS 357 >gi|292493020|ref|YP_003528459.1| permease YjgP/YjgQ family protein [Nitrosococcus halophilus Nc4] gi|291581615|gb|ADE16072.1| permease YjgP/YjgQ family protein [Nitrosococcus halophilus Nc4] Length = 354 Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats. Identities = 47/353 (13%), Positives = 120/353 (33%), Gaps = 4/353 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y+ + + + L+ L ++ + ++ + + V + L+ + Y IP Sbjct: 1 MKILDRYVAKAVISNTLLVLLVLIALYTFVEFITELEEVGEGNYGVMDALRYTAYSIPQY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + + L S+ +EL+ + G S + + L ++ + + + Sbjct: 61 IYDLLPVAALLGSVLGLGSLAGQSELVAMRAAGFSVGRITRSALATGMIFVVVTILMGEV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + L + A+ E F+ +++ + +I + PN Q I I + + Sbjct: 121 LAPPAKQAANTLRSLAKTGHLSEQ-AERGFWTRNNNNFNRIGRVLPNGQYQDIEIFEFDE 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ +G+ L+D S + + +++ Sbjct: 180 QHRLRVISRAAGATYHRDGWH-LSDITQRIISSQGITTRRLPEALWESSLSPEMLDVVMV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + L + + E Y+ F ++ +I ++I Sbjct: 239 DPQQLSAWGLYR-YIDYLEENKQATEQYQQAFWSKVFAPFNTLIMMFLAIPFIFGPLRSV 297 Query: 301 QRKKIHPIFISLSISFGVFW-GFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 + + + I F +F F+ + E + + LF + +L Sbjct: 298 SMGQRILVGALVGIGFFLFNRLFNQLGLVFEFSSWLAAAFPSLLFFGLGMVML 350 >gi|26987718|ref|NP_743143.1| permease YjgP/YjgQ family protein [Pseudomonas putida KT2440] gi|24982406|gb|AAN66607.1|AE016288_6 conserved hypothetical protein [Pseudomonas putida KT2440] gi|313497348|gb|ADR58714.1| Permease YjgP/YjgQ family protein [Pseudomonas putida BIRD-1] Length = 371 Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats. Identities = 46/353 (13%), Positives = 119/353 (33%), Gaps = 26/353 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + + ++ I + ++ + + +L I G+ +P L Sbjct: 2 IVFRYLSREVLVTLSAVSAVLLVIIMSGRFIKYLAQAAQGVLDPGVLFLIMGFRLPGFLQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ TG S+ L+ + A L+++ + + Sbjct: 62 LILPLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLLGMTMAPAALVALLVAWLSLSLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFF--RLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + ++Q+ ++ F L F R + + L G+FI + R Sbjct: 122 PLGVAQVQQIISQQDALTEFDTLVPGRFQTLRDGSRVTYTEQLSDDRINLGGVFISEKRF 181 Query: 181 TQTHKIYYAQSGSIDLDRQAII---------LNDGEVHRKSPISKDISIMKFKSYTLQTE 231 Q A S + I L +G + +P D +K+ +Y + Sbjct: 182 NQDKTKDRAPSVLVAEKGHQEIQADGNRYLVLENGYRYDGNPGQADYRAIKYDTYGVLLP 241 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 + V + S L+ + R+E RL+ + + L+++ Sbjct: 242 KPEVAEEVTEREALPTSELI----------GKEGLRERAELQWRLSLPILVFVVTLLAVP 291 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLF 342 + ++ + + ++ + + + + P + + ++ Sbjct: 292 L---SRVNPRQGRFLKLLPAILLYMAYLTMLISVRGALEKGKLPIALGMWWVH 341 >gi|54298618|ref|YP_124987.1| hypothetical protein lpp2682 [Legionella pneumophila str. Paris] gi|148358636|ref|YP_001249843.1| permease [Legionella pneumophila str. Corby] gi|296108274|ref|YP_003619975.1| permease [Legionella pneumophila 2300/99 Alcoy] gi|53752403|emb|CAH13835.1| hypothetical protein lpp2682 [Legionella pneumophila str. Paris] gi|148280409|gb|ABQ54497.1| permease [Legionella pneumophila str. Corby] gi|295650176|gb|ADG26023.1| permease [Legionella pneumophila 2300/99 Alcoy] Length = 356 Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats. Identities = 42/356 (11%), Positives = 104/356 (29%), Gaps = 3/356 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI + + + + L +V + I + +I+ + + + +P + Sbjct: 4 KILDRYIAKTVLSAIGLVTLMLVGLQIFILFVNQIDDLGRADYGIVQAGVFVLLQMPYQV 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L + ++EL+++ G S + VL ++++ + + I Sbjct: 64 YLFFPIASLLGCLVGLGVLANHSELVVMRAAGISIGQITGAVLKASLIVILLITSLGETI 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + A ++ R +D S + N Sbjct: 124 VPVMAHYANEYKVSALTGGQALLTPRGVWVRNGNDFVSIASVTHENTLRYVNQFRFDNQH 183 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + + I D + + + + + Sbjct: 184 NLKLARQISEVKYVNN--SWIAYDVKQTEFAEDHTKAYHFDTLPWDVPVKPEILKITGTN 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 ++ L L N + + Y+ F +R+TQ L ++ +++I Sbjct: 242 PDEMTLHEL-NRYLREQQRNHQNVSNYKFAFFQRITQPLNTMVMMILAIPFIFGPLRSST 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + F + F + + Q P + L LM + + Sbjct: 301 MGSKLLVGAMVGFGFHILNRFFGPVSTVFQWPPELAAFSPTLIFSLIGIYLMRRVR 356 >gi|325198681|gb|ADY94137.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis G2136] Length = 356 Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats. Identities = 45/360 (12%), Positives = 120/360 (33%), Gaps = 4/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +IL + + + +L + +P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGKGSYGIWEMLGYTALKMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + +EL +I +G S L+ + + +I Sbjct: 61 AYELMPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLILSQFGFIFAIATVALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A A + + + + + I + + P++TL GI I D Sbjct: 121 VAPTLSQKAENIKAAAINGKISTGNTD--IWLKEKNSIINVREMLPDHTLLGIKIWARND 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ + L + ++SI +++ + + +++ Sbjct: 179 KNELAEAVEADSAVLNSDGSWQLKNIRRSTLGEDKVEVSIAAEENWPISVKRNLMDVLLV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K + ++ L + + Y + ++L + L++ + Sbjct: 239 KPDQMSVGELT-TYIRHLQNNSQNTRIYAIAWWRKLVYPAAAWVMALVAFAFTPQTTRHG 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 I L + F + F ++ P ++ L + + + +I+K+ + Sbjct: 298 NMGLKLFGGICLGLLFHLAGRFFGFTSQLYGIPPFLAG-ALPTIAFALLAVWLIRKQEKR 356 >gi|116747639|ref|YP_844326.1| permease YjgP/YjgQ family protein [Syntrophobacter fumaroxidans MPOB] gi|116696703|gb|ABK15891.1| permease YjgP/YjgQ family protein [Syntrophobacter fumaroxidans MPOB] Length = 423 Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats. Identities = 66/371 (17%), Positives = 137/371 (36%), Gaps = 22/371 (5%) Query: 1 MK-SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPT 59 MK + Y+++ + + + + ++ Q + ++ +S+ +L L+ + +P Sbjct: 33 MKMTLYRYLIKEQMVPLGVCLMGVSLVLITGRLFQLLKVLFTSSFTLGDLMALVALAMPK 92 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ P + +N + EL+ + G V+ L + +++ F++ Sbjct: 93 LMLFALPMASLLGVLLAFVRLNSDNELIALRAAGIGFHQFFPAVVSLLLGVTLISFVNMI 152 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDS 178 + P + + ++E F L NP +++GIF+ D Sbjct: 153 FVIPPTGKAFEVKLRSMARSGLPVLMKEGTFITAIPKLTFFFQSVNPTELSVRGIFVQDR 212 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILN----DGEVHRKSPISKDISIMKFKSYTLQTESAN 234 R+ + A+S I R + L +G + R + K+ + FK+Y L Sbjct: 213 REEKVRLAIVAESARIVYQRDSNHLTFKIANGSITRVADDMKNAQAVSFKAYDLSLSLDE 272 Query: 235 S----STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 + + L L + EFH+RL + L+ + Sbjct: 273 LIGSARGSKMNKREMTLRELYRVIVEKTGDVG-----HALEFHQRLAFPSGCL---LLGL 324 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF---LFCIS 347 + A A+ RQR +I I I L + F ++ + +N P L + L CI+ Sbjct: 325 IGAPLGAVFRQRGRIAGITIGLVV-FLAYYVILSAGKGLGENHLVHPFLACWAPNLLCIA 383 Query: 348 SIFLLMIKKKY 358 + F L K + Sbjct: 384 ASFYLWRKMRL 394 >gi|258593793|emb|CBE70134.1| putative Permease YjgP/YjgQ family protein precursor [NC10 bacterium 'Dutch sediment'] Length = 356 Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats. Identities = 42/363 (11%), Positives = 122/363 (33%), Gaps = 20/363 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+ R I + ++ C ++ + ++ +N V+ +L + Sbjct: 3 MLLLDRYLTREIAKPLVIFCGGLLLLFANFTAVRYLNRVADGIMPFQSVLPLVLVRAAVA 62 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + L + ++E+ + ++G S +++ V +++++ + Sbjct: 63 LELLLPIALHLSVVVTLGRLYTDSEMTALFSSGVSPSRIMRIVCVGSLIVAGIVAFLSIY 122 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +L +A + + ++ F+ + + ++ + SR Sbjct: 123 VRPWANENRYRLEREAAADVDLNDMQPGHFYENSSGTVLFFQRRAQSSGRMREVFIQSRS 182 Query: 181 TQTHKIYYAQSGSIDL-----DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 ++ +A + ++ + +++ S + L+ E A + Sbjct: 183 EDRIRLIWADEAHYPEAVEAGAGRTLVCSGAQIYELSRDRGAVRQATSDELVLEWEKART 242 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + K L +EF RL+ + ++ GL+ Sbjct: 243 LSEEYKRKAAPTWQL----------ARSASPKDIAEFQWRLSTPVAALLMGLLGFPL--- 289 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN--PYYIPILYLFLFCISSIFLLM 353 ++ K +F+S+ + H +E+ I ++ L + L+ Sbjct: 290 SRARARQGKYAKLFVSVVSYATFYNLNMMARHWVEKGVVSTVPGIWWVHLLLAILVASLL 349 Query: 354 IKK 356 ++ Sbjct: 350 WRR 352 >gi|86141356|ref|ZP_01059902.1| putative membrane protein [Leeuwenhoekiella blandensis MED217] gi|85831915|gb|EAQ50370.1| putative membrane protein [Leeuwenhoekiella blandensis MED217] Length = 358 Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats. Identities = 55/361 (15%), Positives = 135/361 (37%), Gaps = 7/361 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL+ +F+ L + I + + ++I+ + ++ + Sbjct: 1 MKILDWYILKRYLGTFITMLLLFIPIGITVNLAEKIDKMLANEVPFVEIALYYLDFTIYF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + + + NTE++ ++G S ++P L A ++ + +I Sbjct: 61 ANLLFPLFLFLSVIWFTSKLANNTEVIAFLSSGVSFYRFLRPYLIGATIVCVGAYILGTY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + + N++ +++D+ YI +S++ P++ + F ++ + Sbjct: 121 LAPAASQGFNEFTYEYLKNGKAARETRNVYRQINDNDYIYVSRFTPSSKMGQNFTLEHFE 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK-SYTLQTESANSSTIV 239 T + + + +G R DI I + K + + + + Sbjct: 181 NNTLQYKIQARSIVYRPEDTLYRLNGYKKRIVGKEGDILISEPKLDTLFSFDLEDLTPLE 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 A L + Y +KR + + I +I++ ++ Sbjct: 241 YIAETLTTPRLREFIDKERARGSSAINRYEVVLYKRYSLPVSAYILTIIAVAV---SSMK 297 Query: 300 RQRKKIHPIFISLSISFGVFW---GFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R+ + + +S++F + F I + + +P L LF I +I+LL K Sbjct: 298 RRGGMGINLALGISLAFIFIFFDKVFGTISEQSDFSPMVAVWLPNVLFGILAIYLLNRAK 357 Query: 357 K 357 + Sbjct: 358 R 358 >gi|325132744|gb|EGC55427.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M6190] gi|325138629|gb|EGC61188.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis ES14902] Length = 356 Score = 116 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 45/360 (12%), Positives = 119/360 (33%), Gaps = 4/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +IL + + + +L + +P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGKGSYGIWEMLGYTALKMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + +EL +I +G S L+ + + +I Sbjct: 61 AYELMPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLILSQFGFIFAIATVALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A A + + + + I + + P++TL GI I D Sbjct: 121 VAPTLSQKAENIKAAAINGKISTGN--TGIWLKEKNSIINVREMLPDHTLLGIKIWARND 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ + L + ++SI +++ + + +++ Sbjct: 179 KNELAEAVEADSAVLNSDGSWQLKNIRRSTLGEDKVEVSIAAEENWPISVKRNLMDVLLV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K + ++ L + + Y + ++L + L++ + Sbjct: 239 KPDQMSVGELT-TYIRHLQNNSQNTRIYAIAWWRKLVYPAAAWVMALVAFAFTPQTTRHG 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 I L + F + F ++ P ++ L + + + +I+K+ + Sbjct: 298 NMGLKLFGGICLGLLFHLTGRFFGFTSQLYGIPPFLAG-ALPTIAFALLAVWLIRKQEKR 356 >gi|77919519|ref|YP_357334.1| hypothetical protein Pcar_1923 [Pelobacter carbinolicus DSM 2380] gi|77545602|gb|ABA89164.1| conserved hypothetical membrane protein [Pelobacter carbinolicus DSM 2380] Length = 362 Score = 116 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 51/358 (14%), Positives = 115/358 (32%), Gaps = 10/358 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + YIL R F ++ + +++ +RI+ S+ + + P ++ Sbjct: 4 LYSRYILATFFRLFGLAIGAFAGLYLLVEFFERIDDFIEYHASVTLCVAYFLNKTPLIIT 63 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 V P M L R+ EL+ + G S + P+L + +L S+ + + +I Sbjct: 64 QVAPLACLMAVFMTLGGFTRSGELVAMHAGGISLAKIAAPMLRMGLLFSLIILAANEVIV 123 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + + + +++ + + + I + P + S D Sbjct: 124 PPSIQRARHILTTEVRGGPAVHYKQDKIWLRHNRSILNIRQIEPVQQTLKGITLLSFDKN 183 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDI---SIMKFKSYTLQTESANSSTIV 239 +GS D R S ++ + K L + Sbjct: 184 FRIQQRFDAGSAVYSGGRWYCQDAVTRRFDTTSGNLLTEQRLAEKIEDLPVVPEDFKVPG 243 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 K N+ + ++ + H R+ ++ + I A Sbjct: 244 SKRNEDLPISEFHRLGKKLKREGYNPTRFQVDMHARIAAPFGCLMMTFLGIPFAI--RKG 301 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF----LFCISSIFLLM 353 R I IS++I +++ + + + + PI+ + LF + +L + Sbjct: 302 RGASMALGIAISVAIG-ALYFILNATLLAFGYSGTFPPIIAAWSANILFLLFGTWLFL 358 >gi|260582801|ref|ZP_05850587.1| permease [Haemophilus influenzae NT127] gi|260094127|gb|EEW78029.1| permease [Haemophilus influenzae NT127] Length = 358 Score = 116 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 48/356 (13%), Positives = 117/356 (32%), Gaps = 1/356 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + YI + I + + + +V ++ +I+ +++ V T + + +G IP + Sbjct: 3 NTLDRYIGKSILGAIFATLMTLVGLSAIIKFVEQFRSVGKGTYDIWQAVIFTGLTIPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + L ++ +EL+I+ + G SR + V+ A+ L +F I Sbjct: 63 ETFFPMAALLGALIALGNLASRSELVIMQSAGFSRFKIGIAVMKTALPLVVFTMIIGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + AKA + ++ ++ + + + Sbjct: 123 IPQTEQFARDMRAKALSGGSILSIKNGVWAKDGHHFVFVRRVTDDTKLDDIYIYTFDQQH 182 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 K+ +A S D L + +++ + L+ Sbjct: 183 NLIKLKHANQASYSEDEAKWTLRQVNHSTIMKDEIITTNHLSETWETSLTPDKLGAVSLR 242 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 ++S L + + + + + F +++ Q + + L+++ Sbjct: 243 PTSLSISGLYH-YISFLRETGQDVSRFELTFWRKIFQPVSVGVMMLLALSFIFGSLRSVT 301 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I + F V + P L L I I+ L+ +K+ Sbjct: 302 AGARIVTGICVGFLFYVVNEILGQTSVVYGIPAIFGALIPSLLFIVMIWWLLSRKR 357 >gi|54295468|ref|YP_127883.1| hypothetical protein lpl2554 [Legionella pneumophila str. Lens] gi|53755300|emb|CAH16794.1| hypothetical protein lpl2554 [Legionella pneumophila str. Lens] gi|307611506|emb|CBX01180.1| hypothetical protein LPW_28791 [Legionella pneumophila 130b] Length = 356 Score = 116 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 41/356 (11%), Positives = 103/356 (28%), Gaps = 3/356 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI + + + + L +V + I + +I+ + + + +P + Sbjct: 4 KILDRYIAKTVLSAIGLVTLMLVGLQIFILFVNQIDDLGRADYGIVQAGVFVLLQMPYQV 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L + ++EL+++ G S + VL ++++ + + + Sbjct: 64 YLFFPIASLLGCLVGLGVLANHSELVVMRAAGISIGQITGAVLKASLIVILLITSLGETV 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + A ++ R +D S N Sbjct: 124 VPVMAHYANEYKVSALTGGQALLTPRGVWVRNGNDFVSIASVTRENTLRYVNQFRFDNQH 183 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + + I D + + + + + Sbjct: 184 NLKLARQISEIKYVNN--SWIAYDVKQTEFAEDHTKAYHFDTLPWDVPVKPEILKITGTN 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 ++ L L N + + Y+ F +R+TQ L ++ +++I Sbjct: 242 PDEMTLHEL-NRYLREQQRNHQNVANYKFAFFQRITQPLNTMVMMILAIPFIFGPLRSST 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + F + F + + Q P + L LM + + Sbjct: 301 MGSKLLVGAMVGFGFHILNRFFGPVSTVFQWPPELAAFSPTLIFSLIGIYLMRRVR 356 >gi|121635228|ref|YP_975473.1| hypothetical protein NMC1491 [Neisseria meningitidis FAM18] gi|120866934|emb|CAM10694.1| conserved hypothetical integral membrane protein [Neisseria meningitidis FAM18] gi|261392197|emb|CAX49711.1| conserved hypothetical integral membrane protein [Neisseria meningitidis 8013] gi|325142744|gb|EGC65119.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis 961-5945] Length = 356 Score = 116 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 45/360 (12%), Positives = 119/360 (33%), Gaps = 4/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +IL + + + +L + +P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGKGSYGIWEMLGYTALKMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + +EL +I +G S L+ + + +I Sbjct: 61 AYELMPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLILSQFGFIFAIATVALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A A + + + + I + + P++TL GI I D Sbjct: 121 VAPTLSQKAENIKAAAINGKISTGN--TGIWLKEKNSIINVREMLPDHTLLGIKIWARND 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ + L + ++SI +++ + + +++ Sbjct: 179 KNELAEAVEADSAVLNSDGSWQLKNIRRSTLGEDKVEVSIAAEENWPISVKRNLMDVLLV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K + ++ L + + Y + ++L + L++ + Sbjct: 239 KPDQMSVGELT-TYIRHLQNNSQNTRIYAIAWWRKLVYPAAAWVMALVAFAFTPQTTRHG 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 I L + F + F ++ P ++ L + + + +I+K+ + Sbjct: 298 NMGLKLFGGICLGLLFHLAGRFFGFTSQLYGIPPFLAG-ALPTIAFALLAVWLIRKQEKR 356 >gi|258625834|ref|ZP_05720713.1| Predicted permease [Vibrio mimicus VM603] gi|258582072|gb|EEW06942.1| Predicted permease [Vibrio mimicus VM603] Length = 356 Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats. Identities = 47/355 (13%), Positives = 122/355 (34%), Gaps = 2/355 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I + + + V ++ +I+ ++++ V + L L IP + Sbjct: 3 KILDWYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGEGSYDLLQALLFVVLSIPRDV 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L ++ ++EL+++ G S++ + VL AI L I + + Sbjct: 63 EMFFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIVVTLLGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + + + + D + +I I K + + Sbjct: 123 APQAQ-KLARDMRAFATSGGAIMSVRTGVWARDANDFIFIGKVDNEQLIGMNLWRFDEHK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + + +A+ + + ++ + + I + + + + +K Sbjct: 182 KLSTVIFAEQVYYVGNNEWLMKDAQLTRMVNEIEISKETLPEYRWRTSLAPDKLAVVTVK 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + +LS L + + + Y F +++TQ + + L+++ Sbjct: 242 PEELSLSGL-SDYVHYLKASEQDSSRYELAFWRKMTQPISIAVMMLMALSFIFGPLRSVT 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + +F + F + + P + L ++ L+ +K Sbjct: 301 MGARILSGVIAGFTFYISSEFFGPLSLVYGLPPLFGAVAPSLVFLTIALGLLGRK 355 >gi|330962174|gb|EGH62434.1| hypothetical protein PMA4326_26817 [Pseudomonas syringae pv. maculicola str. ES4326] Length = 353 Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats. Identities = 48/355 (13%), Positives = 109/355 (30%), Gaps = 4/355 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + + L I+ + + + + + S T +L L P Sbjct: 1 MVKLDRYIGKSVLLAILAVLGIILGLVSLFAFIDEMGDI-SDTYTLPDALSYVMMTAPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L S+ ++EL I+ G S ++ V+ +LL I + Sbjct: 60 VYDTLPMAALIGCLIGLGSLASSSELTIMRAAGVSIGRIVWAVMKPMLLLMIAGVLVGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + AQ + L+ R ++ + L Sbjct: 120 VAPYAENKAQAARSLAQGLGDAQSAKHGLWHRQGEEFIHINTVQPNGLMLGVTRYRFDDQ 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 +A+ D L D + ++ + + + ST+++ Sbjct: 180 RHMLTSSFAKEAHFKTD--YWELKDVTTTHFNDGRTEVINTPDERWDVSLSPQLLSTVIM 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 ++S L + + Y F ++ Q V L++I Sbjct: 238 PPESLSISGL-WSYAHYLADQGLSNGRYWLAFWTKVLQPAVTVALVLMAISFIFGPLRSV 296 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + + +F + + P + +L C + LL+ + Sbjct: 297 TLGQRVFTGVVVGFTFRIIQDLLGPSSLLFGFPPLLAVLLPAGVCALAGVLLLRR 351 >gi|261867782|ref|YP_003255704.1| permease [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413114|gb|ACX82485.1| conserved permease [Aggregatibacter actinomycetemcomitans D11S-1] Length = 355 Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats. Identities = 43/357 (12%), Positives = 117/357 (32%), Gaps = 3/357 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + E YI + I + + L +V ++ +I+ +++ V T + + + +P Sbjct: 1 MNTLERYIGKSILGTIFATLLMLVGLSAIIKFVEQFRSVGKGTYDILQAIAYTVLTMPKD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ +EL+++ ++G SR+ + V+ + L + + Sbjct: 61 VETFFPMAALLGALIALGNLASRSELVVMQSSGFSRMRIGFAVMKTTLPLVLLTMVIGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + ++ +N + D + ++ + + + L I+I Sbjct: 121 GIPQT-EQFARDMRSKAISGGSMLSVKNGIWAKDGNNFVYVRRITDDVELNDIYIYTFN- 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 Q + + L R P + + + + L Sbjct: 179 EQRQLEKLKHANRATFNSGKWTLQQVNESRIQPENIQTTNRLNEEWQTNLTPDKLGVASL 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + ++S L N + + + + ++L Q + + ++++ Sbjct: 239 RPTSLSISGLSN-YITFLRETGQDSKNFELTYWRKLFQPISVGVMMMLALSFIFGPLRSV 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I I F V + I L + + + L+ +++ Sbjct: 298 TAGARILIGICFGFLFYVVNELFGKFSLVYNTTPLIGALMPSVLFLIITWWLLARRR 354 >gi|15677421|ref|NP_274577.1| hypothetical protein NMB1571 [Neisseria meningitidis MC58] gi|304387020|ref|ZP_07369275.1| YjgP/YjgQ family permease [Neisseria meningitidis ATCC 13091] gi|7226818|gb|AAF41924.1| conserved hypothetical protein [Neisseria meningitidis MC58] gi|304338892|gb|EFM04991.1| YjgP/YjgQ family permease [Neisseria meningitidis ATCC 13091] gi|308389705|gb|ADO32025.1| hypothetical protein NMBB_1800 [Neisseria meningitidis alpha710] gi|316983819|gb|EFV62799.1| conserved hypothetical protein [Neisseria meningitidis H44/76] gi|325130630|gb|EGC53373.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis OX99.30304] gi|325134626|gb|EGC57266.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M13399] gi|325140779|gb|EGC63293.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis CU385] gi|325199830|gb|ADY95285.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis H44/76] gi|325201753|gb|ADY97207.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M01-240149] gi|325204535|gb|ADY99988.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M01-240355] gi|325205694|gb|ADZ01147.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M04-240196] gi|325208503|gb|ADZ03955.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis NZ-05/33] Length = 356 Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats. Identities = 44/360 (12%), Positives = 118/360 (32%), Gaps = 4/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +IL + + + +L + +P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGKGSYGIWEMLGYTALKMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + +EL +I +G S L+ + + +I Sbjct: 61 AYELIPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLILSQFGFIFAIATVALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A A + + + + I + + P++TL GI I D Sbjct: 121 VAPTLSQKAENIKAAAINGKISTGN--TGLWLKEKNSIINVREMLPDHTLLGIKIWARND 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ + L + ++SI +++ + + +++ Sbjct: 179 KNELAEAVEADSAVLNSDGSWQLKNIRRSTLGEDKVEVSIAAEENWPISVKRNLMDVLLV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K + ++ L + + Y + ++L + L++ + Sbjct: 239 KPDQMSVGELT-TYIRHLQNNSQNTRIYAIAWWRKLVYPAAAWVMALVAFAFTPQTTRHG 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 I L + F + ++ P ++ L + + + +I+K+ + Sbjct: 298 NMGLKLFGGICLGLLFHLAGRLFGFTSQLYGIPPFLAG-ALPTIAFALLAVWLIRKQEKR 356 >gi|218768539|ref|YP_002343051.1| hypothetical protein NMA1760 [Neisseria meningitidis Z2491] gi|121052547|emb|CAM08887.1| conserved hypothetical integral membrane protein [Neisseria meningitidis Z2491] gi|319410788|emb|CBY91173.1| conserved hypothetical integral membrane protein [Neisseria meningitidis WUE 2594] gi|325128630|gb|EGC51499.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis N1568] gi|325144869|gb|EGC67157.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M01-240013] Length = 356 Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats. Identities = 44/360 (12%), Positives = 118/360 (32%), Gaps = 4/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +IL + + + +L + +P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGKGSYGIWEMLGYTALKMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + +EL +I +G S L+ + + +I Sbjct: 61 AYELMPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLILSQFGFIFAIATVALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A A + + + + I + + P++TL GI I D Sbjct: 121 VAPTLSQKAENIKAAAINGKISTGN--TGLWLKEKNSIINVREMLPDHTLLGIKIWARND 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ + L + ++SI +++ + + +++ Sbjct: 179 KNELAEAVEADSAVLNSDGSWQLKNIRRSTLGEDKVEVSIAAEENWPISVKRNLMDVLLV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K + ++ L + + Y + ++L + L++ + Sbjct: 239 KPDQMSVGELT-TYIRHLQNNSQNTRIYAIAWWRKLVYPAAAWVMALVAFAFTPQTTRHG 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 I L + F + ++ P ++ L + + + +I+K+ + Sbjct: 298 NMGLKLFGGICLGLLFHLAGRLFGFTSQLYGIPPFLAG-ALPTIAFALLAVWLIRKQEKR 356 >gi|255038424|ref|YP_003089045.1| permease YjgP/YjgQ family protein [Dyadobacter fermentans DSM 18053] gi|254951180|gb|ACT95880.1| permease YjgP/YjgQ family protein [Dyadobacter fermentans DSM 18053] Length = 360 Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats. Identities = 54/352 (15%), Positives = 117/352 (33%), Gaps = 1/352 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPTV 60 K + Y+++ +++ IV I +I ++++ L I++ LIP Sbjct: 4 KILDRYLIKNFLITYVFVAFVIVLIICMIDYTEKVDDFLDKKAPLREIIIDYYLNLIPYW 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++P + T + + TE++ + ++G S +++P + A++L I FI Sbjct: 64 INYISPLMVFIATVFFTSRIAARTEIIAMLSSGISFGRMLRPYMAGAVVLGILTFIQVGW 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + PK + D S T + + Sbjct: 124 VLPKANKIRNSFEKTYVKNEFYFSGHNVHITIAPDVYAYLESYNTTTQTGNKFTMETIKG 183 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 T+ + +YA + L + +V + + +S T+ + + Sbjct: 184 TKLLQKFYADKIVWQPKKGKWTLQNYQVRTLDSLGERLSRGTEIDTTINLSPKDFESDYN 243 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 L L + + LE Y E + R TQ +I I ++ + +++ Sbjct: 244 LFETFTLPELNAYIDLLKSRGADGLEVYLIEKYTRFTQPFAILILTAIGVIVSARKSRRG 303 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 +I F+ I F + N + L +F + L Sbjct: 304 VGWQIALGFMLAFIYILFFLLSKGVAEAGTINTLFAVWLPNIVFSAIGVLLY 355 >gi|85706342|ref|ZP_01037436.1| Predicted permease [Roseovarius sp. 217] gi|85669115|gb|EAQ23982.1| Predicted permease [Roseovarius sp. 217] Length = 374 Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats. Identities = 52/331 (15%), Positives = 119/331 (35%), Gaps = 5/331 (1%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 +L F L +V I W+ + ++ + + + + ++ + +P V+ +V P Sbjct: 1 MLSQFMVLFGFFALVLVSIVWINKAVRMFDRLIGDGQPAWVFVEFTALTLPGVIGVVLPI 60 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 V+ ++ +EL ++ TG S + L +PVL +++++ + + + + P S Sbjct: 61 AAFAAAVYVVNRLSSESELTVMQATGYSPLRLARPVLVFGVIVAVMMSLLAHYLIPGSLS 120 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 ++ + ++ L + F + I + L+ +F+ D RD + Y Sbjct: 121 QLRLRQDEVSRNISAKLLSDGEFLHPAPGITFYIREITQTGELRDVFLSDRRDPEAPVTY 180 Query: 188 YAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL--KAN 243 + + +++ G + F ++ S S +V + Sbjct: 181 TSSRAYLVQEGGGTRLVMVSGLAQNIRADQNRLFTTYFDDFSYDISSLVSRDVVNLDEVA 240 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 N +L T S+ H R+T L VI L+ A R Sbjct: 241 FANTLEMLRDPEAVAARTGTSYGTVMSQTHGRITAALLCVIAALVGFCTLLVGAHSRFG- 299 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPY 334 + ++ + G+ S ++ + N Sbjct: 300 VWRQVLLAFGLLVGIKIVESIVVAPVLLNGA 330 >gi|325954886|ref|YP_004238546.1| permease YjgP/YjgQ family protein [Weeksella virosa DSM 16922] gi|323437504|gb|ADX67968.1| permease YjgP/YjgQ family protein [Weeksella virosa DSM 16922] Length = 365 Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats. Identities = 52/366 (14%), Positives = 128/366 (34%), Gaps = 13/366 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILL-KISGYLIPT 59 MK + YI++ +F L + IA +I Q+++ + S+ ++ L Y Sbjct: 1 MKILDKYIVKNFLGTFFFMVLILTSIAIIIDFTQKLDRIDSTGSTVTEALIHFYPYWGVW 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ P + + + TE++ + + G S L +P + +A L+ + N Sbjct: 61 IVNTFLPVAVFISVIYFTSRLTAQTEIVGMLSGGISFYRLTRPYVIVAAGLAFTAMMVNN 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLF-----FRLDDDLYIKISKYNPNNTLQGIF 174 ++ P + + L++ ++ ++++ + Sbjct: 121 VVLPWANIKKNKYQYEHLLSMRARKEYYKQQVISAQISSNEYVFVESYDRIEKRSDSYFL 180 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHR-KSPISKDISIMKFKSYTLQTESA 233 Q + A S + D + IL + + SP I+ + K L+ Sbjct: 181 YQKFDSVQLKEQIMASSFTWDDKDSSYILQNVFERKVLSPKKDSIAYLSSKKIKLKATPD 240 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 A N L+ + N + Y +E +R++ I ++++ Sbjct: 241 EILPEGYVAETMNSFELMKFIESQKNKGSANVVVYENELQQRVSSPFSTFILTILALSL- 299 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--FCISSIFL 351 + R+ + + ++++F V+ FS I + Y P + ++ + Sbjct: 300 --SSKKRRGGIGVNLAVGITLAF-VYIFFSQIATTFSEQGYVTPFVAAWIPNVVFGLLTT 356 Query: 352 LMIKKK 357 + ++ Sbjct: 357 FLYFRR 362 >gi|161870426|ref|YP_001599598.1| hypothetical protein NMCC_1474 [Neisseria meningitidis 053442] gi|254805326|ref|YP_003083547.1| putative permease [Neisseria meningitidis alpha14] gi|161595979|gb|ABX73639.1| conserved hypothetical integral membrane protein [Neisseria meningitidis 053442] gi|254668868|emb|CBA06970.1| putative permease [Neisseria meningitidis alpha14] Length = 356 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 44/360 (12%), Positives = 118/360 (32%), Gaps = 4/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +IL + + + +L + +P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGKGSYGIWEMLGYTALKMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + +EL +I +G S L+ + + +I Sbjct: 61 AYELMPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLILSQFGFIFAIATVALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A A + + + + I + + P++TL GI I D Sbjct: 121 VAPTLSQKAENIKAAAINGKISTGN--TGIWLKEKNSIINVREMLPDHTLLGIKIWARND 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ + L + ++SI +++ + + +++ Sbjct: 179 KNELAEAVEADSAVLNSDGSWQLKNIRRSTLGEDKVEVSIAAEENWPISVKRNLMDVLLV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K + ++ L + + Y + ++L + L++ + Sbjct: 239 KPDQMSVGELT-TYIRHLQNNSQNTRIYAIAWWRKLVYPAAAWVMALVAFAFTPQTTRHG 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 I L + F + ++ P ++ L + + + +I+K+ + Sbjct: 298 NMGLKLFGGICLGLLFHLAGRLFGFTSQLYGIPPFLAG-ALPTIAFALLAVWLIRKQEKR 356 >gi|332290236|ref|YP_004421088.1| putative permease YjgP/YjgQ family [Gallibacterium anatis UMN179] gi|330433132|gb|AEC18191.1| putative permease YjgP/YjgQ family [Gallibacterium anatis UMN179] Length = 356 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 46/356 (12%), Positives = 119/356 (33%), Gaps = 3/356 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + YI + I + + +V ++ +I+ +++ + + + IP + Sbjct: 3 NTLDRYIGKTILATIFVVLFLLVGLSAIIKFVEQFRAIGEGNYDTAKAIAYTLLTIPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + L S+ N+EL+++ +G SR + V+ +AI L I Sbjct: 63 ETFFPMAALLGALIGLGSLASNSELVVMQASGFSRFQIGLSVMKVAIPLIILNMALGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ +++ K+ + ++ +++ + + N ++ Sbjct: 123 IPQTEQFAREMRYKSLTGGSLLSVKGSVWAKDGNSFVYIQHIPKENQLNGIYIYQFDQNR 182 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 K+ A + + N + K + + L+ Sbjct: 183 NLQKMSQANRATYANNEWR--FNQISESELNGDHITNKKYLNKVWQTSITPDKLGMVSLR 240 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + +++ L + + +T+ + ++L Q + + L+++ Sbjct: 241 PSMLSITGL-SDYIQFLKNTGQDTKTFELTYWRKLLQPISISVMMLLALSFIFGPLRSVT 299 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I I +F V + + P +I L +F + I+ LM K+ Sbjct: 300 SGVRVIIGICCGFAFYVLDQVFGPLSLVYNIPPFIGALAPSIFFAAIIWWLMAHKR 355 >gi|312142810|ref|YP_003994256.1| permease YjgP/YjgQ family protein [Halanaerobium sp. 'sapolanicus'] gi|311903461|gb|ADQ13902.1| permease YjgP/YjgQ family protein [Halanaerobium sp. 'sapolanicus'] Length = 366 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 51/366 (13%), Positives = 113/366 (30%), Gaps = 14/366 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQI-LQRINLVSSSTESLNILLKISGYLIPT 59 MK+ + YI + + FL I + + + LL++ +P Sbjct: 1 MKTVDKYIYKELIAPFLFGVAAFTGIFIGTDLIFEVTEYYIEWGVDVLTLLRLFFLSLPE 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ + P + T ++ ++E+ + G S + ++ P L + ++ S Sbjct: 61 IIILTFPMAALLGTIMAYNRLSGDSEITAMRAGGISIMAIVLPALIMGLVTSGITIAITE 120 Query: 120 IIEPKCRST-----IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF 174 I P + + + + L R Y+ +K + Sbjct: 121 FIVPGANYQAEQIIHQFKHGERRPDTQYDLFLTPLDSRTSRPDYMLYAKSFNAENGRMTD 180 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDIS--IMKFKSYTLQTES 232 +V ++ R +G V+ + S +++S Sbjct: 181 VVLQSFEDGRPRSVLEAEEALWLRDGWSFFNGTVYFLDREDRSPSLEFSQYRSREDIHSP 240 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 A + + ++ N+ L N + + R EFH R + + IF L++ Sbjct: 241 AQAGKLGKDIDEMNIREL-NEHIALLEQQGRAAYEERVEFHHRFSVPMASFIFALLAAPL 299 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--FCISSIF 350 K + F I +++ I + P L +L I + Sbjct: 300 GIKPQ---RSAGSATGFGISIIIIFIYYVLMTIGDALGSQGTIEPWLGAWLQNIIIFLVG 356 Query: 351 LLMIKK 356 ++ K Sbjct: 357 SGLLYK 362 >gi|167622904|ref|YP_001673198.1| permease YjgP/YjgQ family protein [Shewanella halifaxensis HAW-EB4] gi|167352926|gb|ABZ75539.1| permease YjgP/YjgQ family protein [Shewanella halifaxensis HAW-EB4] Length = 352 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 118/357 (33%), Gaps = 5/357 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + YI R + + ++ L + ++ +I+ + ++ LV T ++ +LIP Sbjct: 1 MRILDFYIARTLISTSSLALLVLTGLSGIIKWVDQLRLVGRGTYTMMDAGVYVLFLIPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + + + N+EL+++ + G SR+ + + AI L I + + Sbjct: 61 IELFFPMAVLLGALIGMGMLASNSELVVMQSAGLSRLQITMSAMKTAIPLMIIVMMLTEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P K++ + ++ + D + NN Sbjct: 121 VAPVAELRAKEIKRTNISGGSLIDSNRGIWAKDGDLFVNIGGAADINNLRDITLYEFDDT 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 T +A S + L D + ++ +K + + S + + Sbjct: 181 TTLTSTIHADSAEY--KDKYWQLYDVRRTTLTDDRVVLTNLKEEKWVSSLTPEKLSVVSV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K ++ LL+ + + E Y ++L Q + + L+++ R Sbjct: 239 KPEALSIEGLLD-YLDYLKSNNQASERYELALWRKLLQPVTVAVMMLVALSFVFGPL--R 295 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + + F + I I S+ L +K Sbjct: 296 TVTMGARVLLGVVAGFSFYICSEIFGPLSIVYGLPAFISAGMPALIFSVGALYFIRK 352 >gi|84387840|ref|ZP_00990855.1| putative permease [Vibrio splendidus 12B01] gi|84377355|gb|EAP94223.1| putative permease [Vibrio splendidus 12B01] Length = 366 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 52/360 (14%), Positives = 118/360 (32%), Gaps = 23/360 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + + + S +++L I G +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFISVLADASDGDIPASLILSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+++++ TG LI+ L+LA++ + + + Sbjct: 62 LMLPLSIYIGILLTFGRLYAESEIVVMNATGIGNKFLIQSALYLALITASVAAFNSFWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + ++Q+ + + L + F D + N L+ +F+ R Sbjct: 122 PWSQDKVEQMYEEVAAENSVDLLPKGKFEGTPDGSSVVFIDDIDGNKLENVFVAQMRPRD 181 Query: 183 THK-----IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + RQ I++ DG H P D + F+ Y Sbjct: 182 SVLPSVMFSKSGDVKELSDGRQVIVMYDGTRHEGVPTRLDYMVTHFEEYEGLIGQREVEK 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 L+ + ++E R++ + L++++ A Sbjct: 242 KGRDWEAIPTLELI----------GNPENSAKAELQWRISL---VLCIPLLTMLVVPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-----YIPILYLFLFCISSIFLL 352 + ++ + I ++ I F S IE+ PI L LF + Sbjct: 289 VNPRQGRFAKIGPAILIYLTYFLAISATKSSIEEGSIPAVVGMWPINALLLFVAIGANFM 348 >gi|127511874|ref|YP_001093071.1| permease YjgP/YjgQ family protein [Shewanella loihica PV-4] gi|126637169|gb|ABO22812.1| permease YjgP/YjgQ family protein [Shewanella loihica PV-4] Length = 352 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 48/355 (13%), Positives = 121/355 (34%), Gaps = 3/355 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +LYI R + + + L + ++ +I+ + +I LV T ++ +LIP Sbjct: 1 MRILDLYIARVLLSTSALCLLVLTGLSGIIKWVDQIRLVGRGTYTMVDAGIYVLFLIPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + + N+EL+++ + G SR + + A+ L + + Sbjct: 61 IEMFFPMAVLLGALIGMGMLASNSELVVMQSAGLSRFQITLSAMKTAVPLMLLVMALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + +L+ + + D DL++ I + N+L I + + D Sbjct: 121 GAPVA-ERHGKELQAVKLSGGSLFKSSRGIWAKDGDLFVNIGEIEDINSLHNIVLYEFDD 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + +L D + +P ++ + + S + + Sbjct: 180 KLNLVGTIEARRGVYSKDHWRLL-DVRQTKITPEQVSLTDLTLYRWESTLTPDKLSVVSV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K ++ L++ + Y +++ Q + + L+++ Sbjct: 239 KPEALSIQGLVD-YLEYLRVNNQDSGRYELALWRKIMQPITVAVMMLVALSFVFGPLRTV 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + SF + + + P + + L S+ + + Sbjct: 298 TMGARVLLGVVAGFSFYICNEIFGPMTLVYGLPAVLGAVMPPLIFSSAAIYYIRR 352 >gi|189345952|ref|YP_001942481.1| permease YjgP/YjgQ family protein [Chlorobium limicola DSM 245] gi|189340099|gb|ACD89502.1| permease YjgP/YjgQ family protein [Chlorobium limicola DSM 245] Length = 360 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 49/353 (13%), Positives = 116/353 (32%), Gaps = 7/353 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK +I R SFL + + + +I +++ ++ ++ ++ +P+ Sbjct: 1 MKLLYRHIFRQFMTSFLFASIAFAALFTLITMVENLDEFFDRGIGISGIVWYYLLALPST 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + ++ ++EL I + G L++P + +L+S ++ + Sbjct: 61 FQITAPVAALLASILTAGRLSASSELAAIRSAGVGMSQLMRPYVLGGLLISGINLLNASF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP + E ++ + I + LQ + + Sbjct: 121 LEPAAAKEKISFEKQVLNETRSGLHEGTNIHVIEPENRIVTIESFDAKHLQASKVTVEQF 180 Query: 181 TQTHKIYYAQSGSIDLDR--QAIILNDGEVHRKSPISKDISIMK-FKSYTLQTESANSST 237 + I + + D I+ + +IS + L + Sbjct: 181 NGSRLISRKDASRMVFDPAIDRWIMQKAAIRSFGADPGEISFSTGNDTLNLLLSIQSLQE 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L+ + NL L+ R + H + L ++ I + Sbjct: 241 LSLQPEEMNLMQHYRYVKEKMQAGFPGLDRARVKLHAKTALPLASLVIIFIGVPL---ST 297 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 + ++ I I+L I F +F G + + N P + +L I + Sbjct: 298 VKKRSGLAAEIAIALFIGF-LFLGMQKTVASLGYNGIIEPWIAAWLPIILFLG 349 >gi|149279360|ref|ZP_01885491.1| hypothetical protein PBAL39_13617 [Pedobacter sp. BAL39] gi|149229886|gb|EDM35274.1| hypothetical protein PBAL39_13617 [Pedobacter sp. BAL39] Length = 367 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 50/362 (13%), Positives = 110/362 (30%), Gaps = 6/362 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILL-KISGYLIPTV 60 K + YI+ +FL + V I + + ++++ S+ + ++ IP Sbjct: 9 KIIDWYIISKYLGTFLYTLTLFVVIIVIFDLSEKLDDFLSNNLTFWQVVSLYYAGSIPFY 68 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M++P + M TE++ I + G S + P A ++ + Sbjct: 69 VNMLSPLINFIAVIFFTAKMADQTEIVPILSGGVSFNRFLLPYFISASIIFAANLGANLY 128 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + S + S N N T + + Sbjct: 129 VLPYTNTLKNTFENTYVKKNDPSSKSDIHMKLDARTYIYMRSFDNKNKTGAQFSLDNFNG 188 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISI--MKFKSYTLQTESANSSTI 238 + + A D +++ L + + + + ++ K K L + S Sbjct: 189 DEMTRKIVADEIKWDSLKRSWKLTNYSIRDIKGLKETMTNGAGKTKDTILDMRPDDFSAY 248 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + + L + ++ E +KR L + LI + + Sbjct: 249 DNIFENLSNQELSDKIKKEKIRGSGIMNDLLFERYKRYLHPLSAYVLTLIGVAL---SSR 305 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + P+ I + +SF + + + + L I I + KK Sbjct: 306 KVRGGVGLPLGIGILLSFTYIVFNQFAKMFSLKGEFPPLLAVLMPTIIFGILGFYLLKKA 365 Query: 359 TK 360 K Sbjct: 366 PK 367 >gi|221133511|ref|ZP_03559816.1| predicted permease [Glaciecola sp. HTCC2999] Length = 354 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 38/356 (10%), Positives = 120/356 (33%), Gaps = 4/356 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 ++YI R + + ++ +V ++ +I+ ++++ V L + + +P + Sbjct: 3 SIIDIYIARTLLSTIFVTLSTLVGLSALIKFVEQLRKVGEGDYDLIVAGLFVFFSLPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + + + N+EL+++ +G S+ +I+ + A+++ + + + Sbjct: 63 EQFFPMATLLGGLIGMGVLASNSELIVMQASGMSKWNIIQSAMKCAVVMVCIILLVGEFL 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + KQ+ +A + ++ + D + +N N + D Sbjct: 123 TPVSEAKAKQIRTEALSGGQVFTSNKIVWTKDGSDFVSIGNVFNQENLGDVTIYKFNDDL 182 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 +I A+ + ++ L D + + + + + S +K Sbjct: 183 DLTQIIAAKRATFV--EESWALQDVHITYINDQRISTNRISLTEWRAALTPDKLSVATVK 240 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 ++ L + Y +++ Q + + L++ Sbjct: 241 PEALSIQGLY-EYVGYLQNNQQDSTRYELAMWRKILQPVSVCVMLLMAFSFVFGSLRSTT 299 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + SF + + P + + + + + +L+++++ Sbjct: 300 MGSRIIVGTLTGFSFFIANEVFGPFAMVYNLPPMLGAI-VPSALFAGVAVLLLRRQ 354 >gi|170079022|ref|YP_001735660.1| permease, YjgP/YjgQ family protein [Synechococcus sp. PCC 7002] gi|169886691|gb|ACB00405.1| permease, YjgP/YjgQ family protein [Synechococcus sp. PCC 7002] Length = 373 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 54/357 (15%), Positives = 136/357 (38%), Gaps = 13/357 (3%) Query: 4 FELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + YI+ + +F + V + + V S ++ LK+ +P + Sbjct: 11 LDRYIIGELNLAFAFGLGLFSALGIAVGSLFDLLAQVRESRLLFDVALKVMALKMPEFIG 70 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + T V + ++ ++E++ + + G S L+ P L +IL + F+ ++ + Sbjct: 71 FALPMAVLLATLIVYSRLSGDSEIIALRSLGISVYRLVLPALIFSILATAITFVFKDQVI 130 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI----KISKYNPNNTLQGIFIVDS 178 P + Q +A L + +E + + + + + ++ + I+D Sbjct: 131 PLANAQATQTLEQAFLQKQAPFRDEKIIYPEYGEDNVLKRLFYAAEFDGQQMKDLTIIDR 190 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA-NSST 237 + ++I A + DL R +G ++ ++++F + +Q + Sbjct: 191 SNGSLNQIVTADAAGWDLARNQWNFQNGIIYFIDIDGSYRNVLRFDRHQIQLSNELRVDE 250 Query: 238 IVLKANDQNLSFLLNPNP---NNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + K D +L+ L +P+ L R F ++++ + G++ Sbjct: 251 ELPKHEDMSLAQLQQYMQTVAADPDRDEAWLRKLRVRFQEKISFPFICLALGVVGAAIGL 310 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + K + + + FG ++ +++I + Y PIL +L + + + Sbjct: 311 RPQSA---GKATGFGLCVGLIFGYYF-LAFMISSVGVAGYLHPILAAWLPNLIVMAI 363 >gi|308050966|ref|YP_003914532.1| permease YjgP/YjgQ family protein [Ferrimonas balearica DSM 9799] gi|307633156|gb|ADN77458.1| permease YjgP/YjgQ family protein [Ferrimonas balearica DSM 9799] Length = 372 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 57/366 (15%), Positives = 134/366 (36%), Gaps = 23/366 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+L+ R+ + +V I Q ++ + + ++ + +P +L Sbjct: 2 IIFRYLLKEALRAQIAVLAVLVTIFISQQFVRILADAAEGQFPGKLVATLLALNMPELLS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + M ++E+ ++ G S + + L LA ++++ I+ + Sbjct: 62 LILPLSLFLGVMMAHGRMYADSEMTVLHAVGVSEWYVTRVTLVLAFIMALISGITAIYVA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI----VDS 178 P + T Q+ KA+ + L + F R + + + L +F+ Sbjct: 122 PWAKETEYQVLEKAESEAGLAALVQGRFQRAANGKAVIYVEGLSKGKLDTVFVAQLPEKD 181 Query: 179 RDTQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + A+ G I Q + L DG K+ ++++F Y ++ +S + Sbjct: 182 DPEGETALVLAEGGRIVEGSDGSQRLQLLDGNRFSGVLNQKEYNLVQFGEYEMEIKSQEA 241 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + K + ++S L + +E H RL + L++++A Sbjct: 242 AHKRRKLSAYSMSQLFEEGSPHA----------WAEIHWRLAVP---IALPLLTLIAVPM 288 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP--ILYLFLFCISSIFLLM 353 + ++ K + ++ I G ++G K +N P L+ I +++ Sbjct: 289 SRVNVRQGKFAKMLPAILIYLG-YFGLLMAGRKAIENGAIPPQLGLWWIHLAALVIGIVL 347 Query: 354 IKKKYT 359 I + Sbjct: 348 IGRGRP 353 >gi|297171743|gb|ADI22735.1| predicted permeases [uncultured verrucomicrobium HF0500_27H16] Length = 412 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 47/363 (12%), Positives = 117/363 (32%), Gaps = 16/363 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + ++ +SF ++ I+ + ++ + + + +L+ L P +L Sbjct: 49 ITDRHLASEWLKSFGITTGAILGLFYIQNLYDNLGDLLEHGAGAAEILQYYLILTPALLS 108 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 V P + T S++RN E+ + + G S +L++ +FLA LLS+ LF+ N Sbjct: 109 PVLPLSVLVATLFSYGSLHRNQEITAMRSMGRSVWSLMRVNMFLAALLSVGLFLLGNGGL 168 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRL-------DDDLYIKISKYNPNNTLQGIFI 175 K ++ + E + L++ + G+++ Sbjct: 169 SKSAEKSREFYEELMQPPFDPASAEVATIKHLTFENASSHRLWVMNRYDPSKHKGHGVYL 228 Query: 176 VDSRDTQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ--TES 232 + + + +++ + + +G + + F+ ++ Sbjct: 229 YLRYVSGKARERFTSRTAEFMPETATWVFREGRQVFFDEAGLSLRFVDFEELKMEGLESP 288 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 K +D +L L + + Y +H+ L ++ L+ + Sbjct: 289 LTLLARQKKLSDLSLRELRELAEVSQGGQGSEARRYGVRYHQALAGPFNCMLALLVGVPF 348 Query: 293 ADKR-ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 A + I I + ++ + Q P + +L F Sbjct: 349 AIAGTRVNPMVGATKAIGIFVG-----YFLLGGASRMLGQQGILEPAVAGWLPMGLMAFY 403 Query: 352 LMI 354 + Sbjct: 404 ALF 406 >gi|89891008|ref|ZP_01202516.1| putative permease, YjgP/YjgQ family [Flavobacteria bacterium BBFL7] gi|89516652|gb|EAS19311.1| putative permease, YjgP/YjgQ family [Flavobacteria bacterium BBFL7] Length = 357 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 50/361 (13%), Positives = 119/361 (32%), Gaps = 6/361 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K + YILR +FL+ + I + I ++I + S ++ Sbjct: 2 LKILDRYILRQYLGAFLLLLCLFIPIMITVHIAEKIGKILSKDIPFTEVMMYLLDFTIYF 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + T + + NTE++ ++G S ++P + A+L+ + + + Sbjct: 62 SNFLFPIFLFISTMFFTSKLANNTEIVAFLSSGVSYNRFLRPYIIGAVLVCVTALVFSTV 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + + K + DDD + + T + Sbjct: 122 FVPDAAAGFNEFQFKYFKSEKERQTNNVFRRISDDDYVYVSNYNSGRKTGYDFTLEHFNG 181 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + YA+ I L+ + + ++ L + + Sbjct: 182 NELEYKIYAE--RIAFKDSVYTLSRYKKRVLQENGEILTTKAKLDTILNFDIDELTPSSY 239 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 A + LL+ + + Y E HKR + + +IF +I++ ++ + Sbjct: 240 VAETLSYQKLLDFIETEESRGNGNMNVYYVEKHKRTSIPVSALIFTIIAVAV---SSVKK 296 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF-LFCISSIFLLMIKKKYT 359 + + I L I+ + E++ + P + ++ I L++ + Sbjct: 297 RGGMGVNLAIGLGIAMSYMFLDKVFGTIAEKSTSFEPWIAVWAPNIFFGIVALLLIRNAR 356 Query: 360 K 360 + Sbjct: 357 R 357 >gi|241760405|ref|ZP_04758500.1| permease YjgP/YjgQ [Neisseria flavescens SK114] gi|241319283|gb|EER55761.1| permease YjgP/YjgQ [Neisseria flavescens SK114] Length = 356 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 41/360 (11%), Positives = 120/360 (33%), Gaps = 4/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +I+ + + + + L + +P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEIINEVGDLGKGSYNSAKLGQYVLMQMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + +EL +I +G S L+ + ++ +I Sbjct: 61 AYELMPLAVLIGGLISLSQLASGSELTVIKASGMSTKKLLLILSQFGLIFAIATVALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A A + + + + I + + P++TL GI I D Sbjct: 121 VAPTLSQKAENIKAAAINGKISTGN--TGLWLKEKNSIINVREMLPDHTLLGIKIWQRND 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ + L + ++S +++ + + +++ Sbjct: 179 KNELTQAAEAESAVLNPDGSWQLKNIRRSILGEDKVEVSTAAEENWPISVKRNLMDVLLV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K + ++ L ++ + + Y + ++L + + L++ + Sbjct: 239 KPDQMSVGELT-TYIDHLEKNNQNTQVYAIAWWRKLVYPVAAWVMALVAFAFTPQTTRHG 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 I L + F ++ P ++ L + + + +I+++ + Sbjct: 298 NMGLKLFGGICLGLLFHFAGRLFGFTSQLYGVPPFLAG-ALPTVLFALLAVYLIRRQEKR 356 >gi|217967689|ref|YP_002353195.1| permease YjgP/YjgQ family protein [Dictyoglomus turgidum DSM 6724] gi|217336788|gb|ACK42581.1| permease YjgP/YjgQ family protein [Dictyoglomus turgidum DSM 6724] Length = 356 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 62/357 (17%), Positives = 121/357 (33%), Gaps = 2/357 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y L+ F + L I V + ++LV + + L L++ IP Sbjct: 1 MKIISRYFLQNFIPVFFVGLLLFTTILLVSPLFIIMDLVVARSIPLKTALELFITKIPPY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + V+ + + E++ + +G S + +L ++ + +F Sbjct: 61 LTYTFPMAIFLAVVYVIGQFSEHGEIMAMKASGASIKYFLPAILMFSLSAQLIMFYVNEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + PK K L KA + E F + + + + I Sbjct: 121 VAPKAYEREKILMNKAYNNVIMPSRENVFFNENNSFYFFRKVDPKNKKFEDILLIELLEK 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 I +A+ D + + +GEV+ + + I KFK Y + A + Sbjct: 181 GNVRLIIHAEKALWDEFKGWTFM-NGEVYSLNKEGEMIFQGKFKEYKVTLNRAPYQLVPS 239 Query: 241 -KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 K ++ F + L ++EFH R+ IF ++++ Sbjct: 240 SKPVEEMSIFEIVDQIRLLEGTGLNLNNLKTEFHIRIALPFTCPIFAILALGLGLNMGKG 299 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + IS+ + + +F + + L +F I I+LL K+ Sbjct: 300 GRSLSFGLSVISIFVYYIIFSIGRSLAKAGIVPYFLGAWLGNIVFLIIGIYLLNKKR 356 >gi|119773934|ref|YP_926674.1| hypothetical protein Sama_0797 [Shewanella amazonensis SB2B] gi|119766434|gb|ABL99004.1| conserved hypothetical protein [Shewanella amazonensis SB2B] Length = 352 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 49/355 (13%), Positives = 119/355 (33%), Gaps = 3/355 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI R + + + L + ++ +I+ + ++ LV + ++ +LIP Sbjct: 1 MSILDWYIARVLISTSSLCLLVLTGLSGIIKWVDQLRLVGRGSYTMMDAGVYVLFLIPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + L M N+EL+++ +G SR+ + + A+ L + + Sbjct: 61 IEMFFPMAVLLGALIGLGMMAANSELVVMQASGQSRLQITVSAMKTAVPLMLLVMALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +L A + + D DL++ I + + NTL I + + Sbjct: 121 VAPAAEQRANELKATMISGGSLIKSH-RGIWAKDGDLFVNIGEVSDINTLGNITLYEFDQ 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + D +A + + + + + + S + + Sbjct: 180 QERLNHVVNAR-RATFDGKAWQMQGVSKTHITEEAIVREDIDSELWQSSLTPDKLSVVSV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K ++ L+ + + Y ++L Q + + L+++ Sbjct: 239 KPESLSIQGLM-GYLDYLRINSQDPSRYELALWRKLMQPVTVAVMMLVALSFVFGPLRSV 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + SF + + + Q P +I L + + + Sbjct: 298 TMGARVLLGVVAGFSFYICNEIFGPMTMVYQLPAFIGAGAPALLFAGAAVFYIRR 352 >gi|332707452|ref|ZP_08427501.1| putative permease [Lyngbya majuscula 3L] gi|332353803|gb|EGJ33294.1| putative permease [Lyngbya majuscula 3L] Length = 388 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 53/359 (14%), Positives = 135/359 (37%), Gaps = 20/359 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPT 59 + + YI+ + L + + + + + V+ + L I L++ IP Sbjct: 16 LSVMDRYIVFELIPPLLFGIGAFSSLGVAIGTLFELVRKVTEAGLPLGIALQVLLLQIPQ 75 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + P + + ++ ++EL+ + + G S L+ P + +++L++ F+ Sbjct: 76 FISYALPMSMLLAALMAYSRLSSDSELIAMRSFGVSIYRLVIPAVVVSLLVTSLTFVFNE 135 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL------------YIKISKYNPN 167 ++ P K KA S+ E N+F+ + ++ Sbjct: 136 LVVPAANYQSKITLDKALKKERPSFQERNIFYPEYQKVKLPNGKKVNKIKRWFYAEQFDG 195 Query: 168 NTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 ++G+ I+D T +I ++S + DG ++ SP + +I++F+ Sbjct: 196 KQMRGLTILDFSQTGLEQIVTSESAVWNPTENLWDFLDGTIYIISPDASYRNILRFQKQK 255 Query: 228 LQT--ESANSSTIVLKANDQNLSF-LLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVI 284 LQ + + + N++ L + + + R ++++ ++ Sbjct: 256 LQLPRTPLDLAKKNRDYGEMNIAQSLERLEVLRHSGNAKKIRKLRIRIQQKISFPFVCLV 315 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 FGL+ + + K IS+ + F ++ +I + + + P++ +L Sbjct: 316 FGLVGASLGTRPQ---RTGKATSFGISVLVIFS-YYLLGFITNALGLVNIFSPLMAAWL 370 >gi|261253952|ref|ZP_05946525.1| putative membrane protein [Vibrio orientalis CIP 102891] gi|260937343|gb|EEX93332.1| putative membrane protein [Vibrio orientalis CIP 102891] Length = 356 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 49/357 (13%), Positives = 121/357 (33%), Gaps = 3/357 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +LYI + I + + V ++ +I+ ++++ V T L L IP + Sbjct: 3 KILDLYIGKTIIATTSLVLATFVGLSAIIKYVEQLRKVGQGTYDLIQALLYVLLSIPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++ + VL A+ L I + + Sbjct: 63 EMFFPMAALLGALIGLGMLASSSELVVMQAAGFSKLDIGLSVLKTAVPLMIMVTLLGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + + + D + +I I K + + Sbjct: 123 APQAQ-KAARDLRAISTSGGALLSVRTGVWARDANDFIFIGKVEDDTIYGMNMWRFDENK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + + +A+ D ++ + I + S+T + + +K Sbjct: 182 RLESVVHAKRVDYVSDNTWMMKDVQLTEMVDEIEISKHSLPEYSWTTSLAPDKLAVVTVK 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + +L L + + + Y F +++TQ + L+++ Sbjct: 242 PEELSLGGLYD-YVSYLKASEQDPARYELAFWRKVTQPFSIAVMMLMALSFIFGPLRSVT 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + +F + F + + P + + +I L+++++K Sbjct: 301 MGARILSGVIAGFTFYISSEFFGPLSLVYNIPPVFGAV-MPSIVFLTIALMLLRRKL 356 >gi|319637673|ref|ZP_07992439.1| hypothetical protein HMPREF0604_00062 [Neisseria mucosa C102] gi|317400828|gb|EFV81483.1| hypothetical protein HMPREF0604_00062 [Neisseria mucosa C102] Length = 356 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 41/360 (11%), Positives = 120/360 (33%), Gaps = 4/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +I+ + + + + L + +P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEIINEVGDLGKGSYNGAKLGQYVLMQMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + +EL +I +G S L+ + ++ +I Sbjct: 61 AYELMPLAVLIGGLISLSQLASGSELTVIKASGMSTKKLLLILSQFGLIFAIATVALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A A + + + + I + + P++TL GI I D Sbjct: 121 VAPTLSQKAENIKAAAINGKISTGN--TGLWLKEKNSIINVREMLPDHTLLGIKIWQRND 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ + L + ++S +++ + + +++ Sbjct: 179 KNELTQAAEAESAVLNPDGSWQLKNIRRSILGEDKVEVSTAAEENWPISVKRNLMDVLLV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K + ++ L ++ + + Y + ++L + + L++ + Sbjct: 239 KPDQMSVGELT-TYIDHLEKNNQNTQVYAIAWWRKLVYPVAAWVMALVAFAFTPQTTRHG 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 I L + F ++ P ++ L + + + +I+++ + Sbjct: 298 NMGLKLFGGICLGLLFHFAGRLFGFTSQLYGVPPFLAG-ALPTVLFALLAVYLIRRQEKR 356 >gi|157960740|ref|YP_001500774.1| permease YjgP/YjgQ family protein [Shewanella pealeana ATCC 700345] gi|157845740|gb|ABV86239.1| permease YjgP/YjgQ family protein [Shewanella pealeana ATCC 700345] Length = 352 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 48/357 (13%), Positives = 117/357 (32%), Gaps = 5/357 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK +LYI R + + ++ L + ++ +I+ + ++ +V + ++ +LIP Sbjct: 1 MKILDLYIARILISTSSLALLVLTGLSGIIKWVDQLRVVGRGSYTMMDAGVYVLFLIPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + + + N+EL+++ ++G SR+ + + AI L I + + Sbjct: 61 IELFFPMAVLLGALIGMGMLASNSELVVMQSSGLSRLQITMSAMKTAIPLMILVMMLTEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P K++ + ++ + + N+ S Sbjct: 121 VAPVAELRAKEIKRTKVSGGSLIESNRGIWAKDGPLFVSIGGVVDSNHLRDITLYEFSDT 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 T +A S + L D + ++ + S + + Sbjct: 181 TDLTSTVHADSAEYR--DKYWQLFDVRRTTLKDEQVVLVNLEQDKWISSLTPEKLSVVSV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K ++ LL+ + + E Y ++L Q + + L+++ R Sbjct: 239 KPEALSIEGLLD-YLDYLESNNQASERYELALWRKLMQPVTVAVMMLVALSFVFGPL--R 295 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + + F + I I S+ L +K Sbjct: 296 TVTMGARVLLGVVAGFSFYICSEIFGPLSIVYGLPAFISAGMPALIFSVGALYYIRK 352 >gi|37528300|ref|NP_931645.1| hypothetical protein plu4479 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36787738|emb|CAE16851.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 359 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 50/354 (14%), Positives = 116/354 (32%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI R I ++ LM+ +V ++ +I+ ++++ V + +P + + Sbjct: 5 LDRYIGRTILQTILMTLFMLVSLSGIIKFVEQLRKVGQGEYTTISAGLYVLLSVPKDIQI 64 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L ++ +EL+++ +G +R+ + V+ AI L I + + P Sbjct: 65 FFPMAALLGALLGLGTLATRSELVVMQASGFTRMQIAGSVMKTAIPLVILTMVIGEWVAP 124 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+ L + + ++ DD + + D + Sbjct: 125 QGEQMARNYRAQKMLGGSLVSTNKGMWTIDGDDFIYIQRIVSDTEIKGVNIYHFNDDKKL 184 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 + YA S D D L+ E + K + + + +V Sbjct: 185 LSVKYAASAVYDKDNDLWKLSQVEESDLTDSKKITGSQRISADWKILLTPEQLNVVALEP 244 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 + L + Y+ K++ L + L+++ Sbjct: 245 EALSISGLYQYIKYLKQSEQESGRYQLNMWKKIFAPLSVAVMMLMALSFIFGPLRSVPMG 304 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P + L L ++ L++K++ Sbjct: 305 VRIVTGISFGFLFYVLNEIFGPLSLVYSVPAVLAALLPSLLFLTVSIYLLLKRR 358 >gi|149907703|ref|ZP_01896450.1| hypothetical protein PE36_07437 [Moritella sp. PE36] gi|149809373|gb|EDM69302.1| hypothetical protein PE36_07437 [Moritella sp. PE36] Length = 355 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 51/355 (14%), Positives = 125/355 (35%), Gaps = 4/355 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K ++YI + I + ++ +V ++ VI+ ++++ V T L L +P + Sbjct: 3 KILDIYIGKAILFATMICLFTLVGLSAVIKYVEQLRAVGRGTYGLLEALMYVMLKMPREI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ ++EL++I G SR ++ + AI + I + + + Sbjct: 63 TIFFPMAALLGALIGLGALASSSELVVIQAAGQSRFKIVLSTMKTAIPMMIIVMLMGEYV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P QL +A + + D + +I I K N + L + I + Sbjct: 123 APYTEQKAAQLRGEATSGQ-SIIRAQKGVWAKDKENFINIGKVNNGSELHDVTIYEFAGN 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 Q + L D + S ++ + + + + Sbjct: 182 QRLVKTTQAR-RATYTGKYWQLTDLRITHFERDSISVTEQATQRWDSTLTPEKLDVVTID 240 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 D ++S L + + + +Y F +++ Q L + L+++ Sbjct: 241 PEDLSISGLYS-YITYLDSNKQDAGSYELAFWRKIFQPLSIGVMVLLALSFVFGPLRTVT 299 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + +F + I + P ++ + + + I ++ ++K Sbjct: 300 MGARILMGVVAGFTFYLASETFGPISLVYSLPPFLGAV-VPSAIFTLIAIVQLRK 353 >gi|330448736|ref|ZP_08312383.1| conserved hypothetical protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492927|dbj|GAA06880.1| conserved hypothetical protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 357 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 45/355 (12%), Positives = 118/355 (33%), Gaps = 1/355 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I + ++ +V ++ +I+ ++++ V + L L +P + Sbjct: 3 KILDWYIGRTIIATSALTLSTLVGLSAIIKYVEQLRKVGQGSYDLLKALYFVLLSMPQDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ +G S++ + L A+ + I + + Sbjct: 63 IMFFPMAVLLGALIGLGMLASSSELVVMQASGFSKLDIGLSTLKTAVPMMIIVVLLGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + ++ + + + ++ + D+D ++ N Sbjct: 123 APQAQKMAREYRSAWVYGGSVIAAQSGVWAKNDNDFIYMGRVHDLNKVDVVNIWKFDNKG 182 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + + A++ S D + + S + + + + +K Sbjct: 183 KLEDVTSAKTASYDKSTGWTMHDVTITDTAGNSKLTNSHVASMKWDTTMTPDKLAVVTVK 242 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + LS L N + + Y F ++ Q + L+++ Sbjct: 243 PEELPLSGLYN-YVSYLKESKQDASRYELAFWRKALQPFSIAVMMLLALSFVFGPLRSVT 301 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + +F + + + + P I L L + L+ +K Sbjct: 302 MGARVLSGVIFGFAFYISDQVFGPMILVYRLPPIIGALGPSLVFLFITIYLLRRK 356 >gi|126736391|ref|ZP_01752133.1| hypothetical protein RCCS2_01329 [Roseobacter sp. CCS2] gi|126714212|gb|EBA11081.1| hypothetical protein RCCS2_01329 [Roseobacter sp. CCS2] Length = 369 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 62/351 (17%), Positives = 123/351 (35%), Gaps = 5/351 (1%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 +L + F L ++ I W+ + + + + + +S + L+ + +P+V+ + P Sbjct: 1 MLSQLMVLFGFFSLVLILIYWINRAVVLFDQLIADGQSAGVFLEFTALSLPSVMRLALPL 60 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 V M+ +EL ++ TG S L +PVL+ I++++ + + + P + Sbjct: 61 AAFAAAVYVTNRMSTESELTVVQATGYSPFRLARPVLYFGIIVALMMSALMHFLVPMSAA 120 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 + A+ +T L E F + + I P LQ IF+ D+R Y Sbjct: 121 RLADRQAEIAQNITARLLTEGQFLEPINGVTFYIRDITPAGELQDIFLSDTRSDAEQVTY 180 Query: 188 YAQSGSIDLDRQAI--ILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQ 245 A + D I ++ DG V ++ + F + D Sbjct: 181 TATKAFLVRDNDTIQLVMLDGMVQTLRTENQRLFTTTFDDFAYNISDLIRQPRNRGRRDA 240 Query: 246 N--LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 LLNP P S H R +Q + ++ L+ A R Sbjct: 241 YLFTWELLNPTPALEAETGRDAARLISLGHDRFSQSILGIVAALLGFSALMVGGYSRFG- 299 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 I ++ + V + + +P + YL + ++ Sbjct: 300 VWKQIIGAIFLIIVVKAVETTGLRIARSDPQLWMVAYLQSAVGFVMIWFLL 350 >gi|323492970|ref|ZP_08098108.1| lipopolysaccharide ABC transporter permease [Vibrio brasiliensis LMG 20546] gi|323312801|gb|EGA65927.1| lipopolysaccharide ABC transporter permease [Vibrio brasiliensis LMG 20546] Length = 356 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 47/357 (13%), Positives = 120/357 (33%), Gaps = 3/357 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +LYI + I + + V ++ +I+ ++++ V T L L IP + Sbjct: 3 KILDLYIGKTIIATTSLVLATFVGLSAIIKYVEQLRKVGEGTYDLIQALLFVLLSIPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++ + VL A+ L + + + Sbjct: 63 EMFFPMAALLGALIGLGMLASSSELVVMQAAGFSKLNIGMSVLKTAVPLMVLVTLLGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + + + + D + +I I K + + Sbjct: 123 APQAQ-KMARDLRAFATSGGAILSVRTGVWARDANDFIFIGKVEDDKIYAMNMWRFDEEK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + + +A + D + + + + S+T + + +K Sbjct: 182 RLESVVHAATVEYVADNTWKMKDVQLTEMVDEVEISKQSLPEYSWTTSLAPDKLAVVTVK 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + +L L + + Y F +++TQ + L+++ Sbjct: 242 PEELSLGGLYD-YVTYLKASEQDPSRYELAFWRKVTQPFSIAVMMLMALSFIFGPLRSVT 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + +F + F + + P + + +I L+++++K Sbjct: 301 MGARILSGVIAGFTFYISSEFFGPLSLVYNIPPVFGAV-MPSLVFLTIALMLLRRKL 356 >gi|262401790|ref|ZP_06078355.1| putative membrane protein [Vibrio sp. RC586] gi|262351762|gb|EEZ00893.1| putative membrane protein [Vibrio sp. RC586] Length = 356 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 47/355 (13%), Positives = 122/355 (34%), Gaps = 2/355 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I + + + V ++ +I+ ++++ V + L L IP + Sbjct: 3 KILDWYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGEGSYDLLQALLFVVLSIPRDV 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L ++ ++EL+++ G S++ + VL AI L I + + Sbjct: 63 EMFFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIIITLLGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + + + + D + +I I+K + + Sbjct: 123 APQAQ-KLARDMRAFATSGGAIMSVRTGVWARDANDFIFIAKVDNEQLTGMNLWRFDENK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + + +A+ + + ++ + S I + + + + +K Sbjct: 182 KLSTVIFAERVDYVGNNEWLMKDAQLTRLVSDIEISKESLPEYRWRTSLAPDKLAVVTVK 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + +LS L + + + Y +++TQ + + L+++ Sbjct: 242 PEELSLSGL-SDYVHYLKASEQDSSRYELALWRKVTQPISIAVMMLMALSFIFGPLRSVT 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + +F + F + + P + L ++ L+ +K Sbjct: 301 MGARILSGVIAGFTFYISSEFFGPLSLVYGLPPLFGAVAPSLVFLTIALGLLGRK 355 >gi|261211061|ref|ZP_05925350.1| putative membrane protein [Vibrio sp. RC341] gi|260839562|gb|EEX66173.1| putative membrane protein [Vibrio sp. RC341] Length = 356 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 46/355 (12%), Positives = 123/355 (34%), Gaps = 2/355 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I + + + V ++ +I+ ++++ V + L L IP + Sbjct: 3 KILDWYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGEGSYDLLQALLFVVLSIPRDV 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L ++ ++EL+++ G S++ + VL AI L I + + Sbjct: 63 EMFFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIIITLLGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + + + + D + +I I+K + + + Sbjct: 123 APQAQ-KLARDMRAFATSGGAIMSVRTGVWARDANDFIFIAKVDNEQLIGMNLWRFDENK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + + +A+ + + ++ + + I + + + + +K Sbjct: 182 KLSTVIFAEEVDYIGNNEWLMKDVHLTRMVNDIEISKEALPEYRWHTSLAPDKLAVVTVK 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + +LS L + + + Y +++TQ + + L+++ Sbjct: 242 PEELSLSGL-SDYVHYLKASEQDASRYELALWRKVTQPISIAVMMLMALSFIFGPLRSVT 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + +F + F + + P + L ++ L+ +K Sbjct: 301 MGARILSGVIAGFTFYISSEFFGPLSLVYGLPPLFGAIAPSLVFLTIALGLLGRK 355 >gi|258591110|emb|CBE67405.1| putative Permease YjgP/YjgQ [NC10 bacterium 'Dutch sediment'] Length = 362 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 44/351 (12%), Positives = 112/351 (31%), Gaps = 10/351 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + Y+ + R S + + ++ ++ + R++ S ++++ Y +P Sbjct: 6 MRILDRYLAKEFLRICAFSLVIFLALSVIVDLFDRLSRFLD--VSGVVVIQYYIYRLPWF 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 V P + L M R+ ELL + S ++ P L L +++S I Sbjct: 64 GFQVMPVAVLLAALFSLGKMARHNELLAMKMGHLSIFRIVVPPLVLGLVVSFAALILGES 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD--DLYIKISKYNPNNTLQGIFIVDS 178 I P+ ++ +N + ++ IS + V Sbjct: 124 IVPRMNERALDAYRVKVQKVSPFQRTKNNDIWYRAKGNRFLHISLLEAASGSIRGLTVFE 183 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI-SKDISIMKFKSYTLQTESANSST 237 + L +GE+ R P + + + L+ + + + Sbjct: 184 LSPDFRLARRIDAKEARWQDGQWRLQNGEISRTKPDGTFRVDPFTHLTLYLEEKPEDLAH 243 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +V +A + S L Y+ + + + ++ I I A + Sbjct: 244 VVREAEEMTSSEL-REYIERLAKAGVSSVRYQVDLAAKGSTAFTNLVMAFIGIAFALRTG 302 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 ++ + + ++ + + + + P++ +L + Sbjct: 303 ----KRGVMAWTGACVVAAVCYSILNSFSISLGRGDVLPPLVAAWLPNVLF 349 >gi|120599782|ref|YP_964356.1| permease YjgP/YjgQ family protein [Shewanella sp. W3-18-1] gi|120559875|gb|ABM25802.1| permease YjgP/YjgQ family protein [Shewanella sp. W3-18-1] Length = 370 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 62/371 (16%), Positives = 136/371 (36%), Gaps = 25/371 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R + ++ + L ++ I ++ + S ++++ + G IP ++ Sbjct: 2 IVFRYLIREVFKAQIAVLLVLLTIFISQHFVRILADASDGEFPASLIVTLIGLNIPALVV 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + M E++I+ G S + + L LA++ +F + Sbjct: 62 LVLPLSLFLGILVAHGRMYSENEMVILHGVGVSEWYVTRVTLILAVVNMLFTGYLSLYVT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI-----VD 177 P Q+ KAQ + L + F + + + + Sbjct: 122 PWAEEQQNQVLEKAQSEAGLAALVQGRFQASPNGRAVLFVERIGKDNELEKVFVAQLPEP 181 Query: 178 SRDTQTHKIYYAQSGSIDLDRQ---AIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 S +T + A++G + D + LN+G ++ SP KD +++F Y +Q + Sbjct: 182 SDETGVTNVVVAKNGRVLEDNMGAQQLQLNNGVRYQGSPRLKDYQMIEFGGYKMQIKEQQ 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 K + ++ LL +EFH RL L I LI++ A Sbjct: 242 VDERRRKLSALTVTDLL----------KVESAEAVAEFHWRLAIPLAIPIMTLIAVPLA- 290 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLL 352 + ++ K + ++ + G F + P Y+ + ++ L + L Sbjct: 291 --RVNVRQGKFAKMLPAVLLYLGYFGLMVAGRKALQDGVIPQYLGMWWIHLSALIMGIFL 348 Query: 353 MIKKK--YTKI 361 + K + + ++ Sbjct: 349 LGKDRPLFARL 359 >gi|254786690|ref|YP_003074119.1| permease, YjgP/YjgQ family [Teredinibacter turnerae T7901] gi|237683657|gb|ACR10921.1| permease, YjgP/YjgQ family [Teredinibacter turnerae T7901] Length = 378 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 48/379 (12%), Positives = 136/379 (35%), Gaps = 36/379 (9%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + S L ++ I + + + ++ +LL + Y +P L Sbjct: 2 IIFRYLAREVLSSMFAVSLVLLMIIISARFVNYLAEAAAGKLDAGVLLTLMAYRLPAYLE 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + ++E+ ++ G S+ L+ L ++++++ + + + Sbjct: 62 LILPLGLFIGILMAYGRLYLDSEMTVLSACGLSQKRLVGYTLAASLVVAMLVGLFSLYLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR--- 179 P+ + L A+ + F L+ + F LD ++ + Q + ++ Sbjct: 122 PQGVKASEALLAEQRNRTDFETLKPSRFHTLDQGAGTSYAESISEDKKQLRGVFMAKVSP 181 Query: 180 --DTQTHKIYYAQSGSI--------------DLDRQAIILNDGEVHRKSPISKDISIMKF 223 Q + ++ ++L +G + +P +++ +++F Sbjct: 182 IDPADDLDKVTHQEADLTVLTAESGETVIDPQSGQKYLLLKNGRRYVGTPGTQNYQVVEF 241 Query: 224 KSYTLQTESANSSTIVLKAND-QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFP 282 +++ + + + D LL + + R + + Sbjct: 242 GNFSQLLPEPDYAVKPKRFTDGLTTFKLLQAKTREAS----------AALQWRFSMPVLV 291 Query: 283 VIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-NPYYIPILYL 341 +I GL+++ ++ + + ++ + + IE+ N +L+L Sbjct: 292 MIVGLLAVPL---SKTQPRQGRYAKMLPAIILYMVYLVCVNAARGLIEKGNEPVPGMLWL 348 Query: 342 --FLFCISSIFLLMIKKKY 358 LF ++FLL+ K++ Sbjct: 349 VHLLFFTVALFLLVDKRRL 367 >gi|197119770|ref|YP_002140197.1| membrane protein [Geobacter bemidjiensis Bem] gi|197089130|gb|ACH40401.1| membrane protein, YjgQ-related protein [Geobacter bemidjiensis Bem] Length = 360 Score = 115 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 48/358 (13%), Positives = 111/358 (31%), Gaps = 9/358 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI R + + + I V+ +++++ + S L IP + Sbjct: 1 MNILTRYIARAYVKMLSLCLGSFIAIYLVVDFMEKVSRFTRYGASWKHLALFFITKIPEM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P M T L +++ +EL I + G S + P+L +++L+S+ + Sbjct: 61 IIDAAPLAVLMATLLTLGTLSLTSELTAIRSCGVSLFRISLPILVISVLMSLGVLAIGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + PK + + + S ++ + + + I Sbjct: 121 VLPKTYAQRTYIQEVLIQKKSPSAFFRQQNIWFREEGTVLRASLFEPARNELKGITLWEL 180 Query: 181 T---QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 +I + + + + + LQ + A+ T Sbjct: 181 QPGTGEPLKRTEADLAILGAKGWMFRDAVVRQFRDGEVSSTQKYRELPVELQLKPADLKT 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ +L L + Y ++ H R++ + + I A + Sbjct: 241 LGKFSDSMSLVEL-SRYCRKLRASGYDPTRYVTQMHSRISMPFGCAVMAFLGIPFALRGG 299 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF--LFCISSIFLLM 353 R + +S+ + F S II + Q P++ + F + Sbjct: 300 --RSSGIAFGVGLSIGVGFLYVIVNSVIIS-VGQVGLLPPVVAAWATNFIFFVAGAWL 354 >gi|291616052|ref|YP_003518794.1| YjgQ [Pantoea ananatis LMG 20103] gi|291151082|gb|ADD75666.1| YjgQ [Pantoea ananatis LMG 20103] Length = 378 Score = 115 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 47/357 (13%), Positives = 117/357 (32%), Gaps = 3/357 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + YI + I + LM+ +V ++ +I+ + ++ S + +P + Sbjct: 23 RVLDRYIGKTIFNTILMTLFMLVSLSGIIKFVDQLRKTGQGAYSALDAGYYTLLSVPKDI 82 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ + +EL+++ G +R+ + V+ AI L + + Sbjct: 83 EIFFPMAALLGALLGLGTLAQRSELVVMQAAGFTRMQVALSVMKTAIPLVLLTMAIGEFV 142 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + A+ + L+ + ++ + + D Sbjct: 143 APQGEQMARNFRAQQLYGGALVSTQSGLWAKDGNNFIYIERVKGDDEIDGVSIYNFTDDR 202 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVL 240 + + YA + + D++ +L+ + P S + + L Sbjct: 203 RLQSVRYAATAKWNKDKKLWVLSQVDESNLTDPKQITGSQSLTGEWKTSLTPDKLGVVAL 262 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + +++ L + + YR ++ Q L + L+++ Sbjct: 263 DPDALSITGLYD-YSKYLKQSGQESGRYRLNMWSKIFQPLSVAVMMLMALSFIFGPLRSV 321 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P + L F +I L M+ K+ Sbjct: 322 SMGVRVVTGISFGFLFYVLDQIFGPLSLVYGLPPIFGAI-LPSFAFFAISLFMLIKR 377 >gi|187250533|ref|YP_001875015.1| permease YjgP/YjgQ family protein [Elusimicrobium minutum Pei191] gi|186970693|gb|ACC97678.1| Permease YjgP/YjgQ family protein [Elusimicrobium minutum Pei191] Length = 370 Score = 115 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 56/365 (15%), Positives = 117/365 (32%), Gaps = 10/365 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K YI F + + + + I +++ + ++LK +P+ L Sbjct: 11 KILYRYIASKFWMPFFFAMAMFCILVLLGDFFENIKSITNGYATFRLILKYCFLNLPSWL 70 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M+ P + V++ M E +G L P++ IL+ + + + Sbjct: 71 GMLLPVACLLAVLFVISDMVAGGEWTACLASGYRPGQLFVPLIACVILVVFLNSLMQEFV 130 Query: 122 EPKCRST----IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD 177 P+ ++ + L L + + Sbjct: 131 YPRVSQKAEQVFRRQLRGDKDFQAGIERNITLRINPRQMLLAQTLQSGSLTMYGITTEFY 190 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + + K A++ D D + DG + I F + + A Sbjct: 191 NENWEIEKQIVARNLVWDKDEKIWFYKDGVIRYFEEG-ITIREEVFDTLESDLKVAPKDI 249 Query: 238 IVLKANDQNLS-FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V ++ +S L + + ++ H +L + +I LI + A Sbjct: 250 SVGDIEEKAISVRELLKKISFLGRSGLVTYKEKTNLHNKLAMPVMTIIMCLIGMPFAV-- 307 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 VR+R K+ I +L +SF +W + QN P + + + + + I+ Sbjct: 308 -TVRKRGKVINIIAALVMSFSFWWV-MTMASTAGQNGILSPFIAGWGIVVLAAAAVFIEF 365 Query: 357 KYTKI 361 K KI Sbjct: 366 KIMKI 370 >gi|253997572|ref|YP_003049636.1| permease [Methylotenera mobilis JLW8] gi|253984251|gb|ACT49109.1| permease YjgP/YjgQ family protein [Methylotenera mobilis JLW8] Length = 356 Score = 115 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 44/352 (12%), Positives = 114/352 (32%), Gaps = 5/352 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+ + I + L+ L ++ + ++Q + + + L+ +L P Sbjct: 1 MKIITRYLFKEITVNVLLITLALIAMFSFFDLIQELESLGHGSYGLSKILLFVALSAPGH 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + L + R +EL+++ +G S +L ++ + +L ++ F+ Sbjct: 61 VYEVMPVAVLVGCMYSLGQLARYSELIVLRVSGISLYSLAATLIKIGMLFTVITFLIG-E 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q ++ + D ++ + + + TL I I + D Sbjct: 120 LITPLSEKMAQRIRIKATDSVIVQDFKSGLWVKDGHSFVNVEEVLADTTLLNIHIYEFDD 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + D Q L S + + ++ + +++ Sbjct: 180 KFNLRTVSHAHKGLYEDEQWH-LKSVSQTHLDKDSNHVEHLDKATWRSLIRPELLNVLLV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + L ++ + Y+ +L L ++ ++++ A R Sbjct: 239 LPEKMSAWNLY-AYIDHLAANKQKTTRYKMALWAKLVYPLASLVMVILALPFAFI--QQR 295 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 IFI + + +H N + + + + L Sbjct: 296 ATGASTKIFIGIMLGILYQTLNQTFVHLGLLNDWAPAFSAITPTALFLLGGL 347 >gi|157374155|ref|YP_001472755.1| permease YjgP/YjgQ family protein [Shewanella sediminis HAW-EB3] gi|157316529|gb|ABV35627.1| permease YjgP/YjgQ family protein [Shewanella sediminis HAW-EB3] Length = 352 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 48/355 (13%), Positives = 114/355 (32%), Gaps = 3/355 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +LYI R I S + L + ++ +I+ + ++ LV + ++ +LIP Sbjct: 1 MRILDLYIARTIVSSSALCLLILTGLSGIIKWVDQLRLVGRGSYTMLDAGIYVLFLIPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M P + + + N+EL+++ ++G SR + + AI L + + Sbjct: 61 LEMFFPLGVLLGALIGMGMLASNSELVVMQSSGLSRWQITLSAMKTAIPLMLLIMALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P +L A + ++ + D + N+ Sbjct: 121 GAPVAEQKANELQATKLSGGSLIKSSRGIWAKDGDLFVNIGEVEDINHLGNITLYEFDET 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + +A+ G D L D + ++ + + S + + Sbjct: 181 LSLVRTIHAEHGVYSND--HWRLMDVRQTDLTEDKVTLTDLTLYRWESTLTPDKLSVVSV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K ++ L+ + + Y ++L Q + + L+++ Sbjct: 239 KPESLSIQGLM-GYLDYLKVNNQDSARYELALWRKLLQPVTVGVMMLVALSFVFGPLRTV 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + SF + + + P +I + + + K Sbjct: 298 TMGARVLLGVIAGFSFYISSEIFGPLTLVYGVPAFIGAGMPAVIFSAGAVYFIRK 352 >gi|325136762|gb|EGC59362.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M0579] Length = 356 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 44/357 (12%), Positives = 117/357 (32%), Gaps = 4/357 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +IL + + + +L + +P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGKGSYGIWEMLGYTALKMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + +EL +I +G S L+ + + +I Sbjct: 61 AYELMPLAVLIGGLLSLSQLAAGSELTVIKASGMSTKKLLLILSQFGFIFAIATVALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A A + + + + I + + P++TL GI I D Sbjct: 121 VAPTLSQKAENIKAAAINGKISTGN--TGLWLKEKNSIINVREMLPDHTLLGIKIWARND 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ + L + ++SI +++ + + +++ Sbjct: 179 KNELAEAVEADSAVLNSDGSWQLKNIRRSTLGEDKVEVSIAAEENWPISVKRNLMDVLLV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K + ++ L + + Y + ++L + L++ + Sbjct: 239 KPDQMSVGELT-TYIRHLQNNSQNTRIYAIAWWRKLVYPAAAWVMALVAFAFTPQTTRHG 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I L + F + ++ P ++ L + + + +I+K+ Sbjct: 298 NMGLKLFGGICLGLLFHLAGRLFGFTSQLYGIPPFLAG-ALPTIAFALLAVWLIRKQ 353 >gi|167032002|ref|YP_001667233.1| permease YjgP/YjgQ family protein [Pseudomonas putida GB-1] gi|166858490|gb|ABY96897.1| permease YjgP/YjgQ family protein [Pseudomonas putida GB-1] Length = 371 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 45/353 (12%), Positives = 119/353 (33%), Gaps = 26/353 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + + ++ I + ++ + + +L I G+ +P L Sbjct: 2 IVFRYLSREVLVTLSAVSAVLLVIIMSGRFIKYLAQAAQGVLDPGVLFLIMGFRLPGFLQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ TG S+ L+ + A L+++ + + Sbjct: 62 LILPLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLLGLTMAPAALVALLVAWLSLSLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFF--RLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + ++Q+ ++ F L F R + + L G+FI + R Sbjct: 122 PLGVAQVQQIISQQDALTEFDTLVPGRFQTLRDGSRVTYTEQLSDDRINLAGVFISEKRF 181 Query: 181 TQTHKIYYAQSGSIDLDRQAII---------LNDGEVHRKSPISKDISIMKFKSYTLQTE 231 Q A S + I L +G + +P D +K+ +Y + Sbjct: 182 NQDKTKDRAPSVLVAEKGHQEIQADGNRYLVLENGYRYDGNPGQADYRAIKYDTYGVLLP 241 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 + V + S L+ + R+E R++ + + L+++ Sbjct: 242 KPEVAEEVTEREAIPTSELI----------GKKGLRERAELQWRISLPILVFVVTLLAVP 291 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLF 342 + ++ + + ++ + + + + P + + ++ Sbjct: 292 L---SRVNPRQGRFLKLLPAILLYMAYLTMLISVRGALEKGKLPIALGMWWVH 341 >gi|327481778|gb|AEA85088.1| permease [Pseudomonas stutzeri DSM 4166] Length = 353 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 44/356 (12%), Positives = 113/356 (31%), Gaps = 5/356 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + L IV +A + + + V L L+ P Sbjct: 1 MVKLDRYIGIHVFLAILTVLGIIVGLALLFAFIDELGDV-QGNYGLGDALQYVLLTSPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L ++ ++EL I+ G S ++ V+ ++L + + Sbjct: 60 LYDMLPMAALIGCLIGLGTLASSSELTIMRAAGVSLGRIVLSVMKPMLVLLVAGILIGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + AQ A + L+ R +++ + + + Sbjct: 120 VAPLTEDIAQARRSLAQGAGEAQSSKRGLWHRQENEFVHVNAVQPGGVLVGVTRYRFDEE 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + +A+ S D L + +++ + + +Q T+V+ Sbjct: 180 RRLLSSSFARRASYQGD--HWRLENIATTHFRGDHTEVARAPEERWDVQLTPQLLGTVVM 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + +++ L + + Y F ++ Q V L++I Sbjct: 238 EPEALSITGL-WRYIHYLGEQGLNNSRYWLAFWTKVLQPAVTVALVLLAISFIFGPLRSV 296 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + + F + ++ + ++ L + I ++++ Sbjct: 297 TLGQRIFTGVVVGFVFRIIQDLLGPASQVFGFSPLLAVV-LPACVCALIGAWLLRR 351 >gi|251792101|ref|YP_003006821.1| permease [Aggregatibacter aphrophilus NJ8700] gi|247533488|gb|ACS96734.1| conserved permease [Aggregatibacter aphrophilus NJ8700] Length = 355 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 45/357 (12%), Positives = 123/357 (34%), Gaps = 3/357 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + E YI + I + + L +V ++ +I+ +++ V T + + + +P Sbjct: 1 MNTLERYIGKSILGTIFATLLMLVGLSAIIKFVEQFRSVGKGTYDIWQAIAYTVLTMPKD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ +EL+++ ++G SR+ + V+ I L + I Sbjct: 61 VETFFPMAALLGALIALGNLASRSELVVMQSSGFSRMRIGLAVMKTTIPLVLLTMIIGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + ++ +N + D + ++ + + + L+ I+I + Sbjct: 121 GIPQT-EQFARDMRSKAISGGSMLSVKNGIWAKDGNNFVYVRNISDDVELRDIYIYTFNE 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + + + D + + L P S + + + L Sbjct: 180 QRRLEKLKHANHAAFNDGKWM-LKQVNESTIQPDSVNTVNRLNEEWQTNLTPDKLGVASL 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + ++S L + + + + + ++L Q + + ++++ Sbjct: 239 RPTSLSISGL-SSYITFLKETGQDSKNFELTYWRKLFQPISVGVMMMLALSFIFGPLRSV 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I I F V + I L + ++ + L+ +K+ Sbjct: 298 TAGARILIGICFGFLFYVVNELFGKFSLVYNTTPLIGALMPSMLFLAITWWLLARKR 354 >gi|256823038|ref|YP_003147001.1| permease YjgP/YjgQ family protein [Kangiella koreensis DSM 16069] gi|256796577|gb|ACV27233.1| permease YjgP/YjgQ family protein [Kangiella koreensis DSM 16069] Length = 370 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 55/370 (14%), Positives = 127/370 (34%), Gaps = 25/370 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + S + I +I++ + ++ S +++ ++ G P ++ Sbjct: 2 ILSRYLNREVLTSTTAILGVLFAIFMSQRIVKYLAQAAAGDISGSMVWQMVGLYSPILIG 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P F + + + ++E+ ++ + G S LI+ + A+ +++ + Sbjct: 62 FLLPLAFFLGCLLAFSRLYVDSEMAVLRSVGVSERFLIRMLAPAALFIAVVGGAVTLWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P+ Q+ + L S L F + + + +T G F + ++ Sbjct: 122 PQANELTYQIRDEHASKLELSMLTPGHFQMFQQGQGVVYADSSERSTKLGNFFLAEMPSE 181 Query: 183 THKIYYAQSGSIDL-------DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + S D+ + LNDG V+ + + +F+ Y + ++ S Sbjct: 182 MNPNTRIISAQSAERFYDESLDKNFLQLNDGHVYELDGNQQVSKVTRFERYFARLDAERS 241 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 K + + LL +EFH RL + +F ++I Sbjct: 242 IVSRRKISATSTPELL----------ASGDGASWAEFHWRLAVPISVPLFMFLAI---PL 288 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-----NPYYIPILYLFLFCISSIF 350 + + K + +L + G +E +IPI + F + + Sbjct: 289 SRVRPREGKFAKMLPALMVYIGYIVLIVVFRRALESEQIPGWLGFIPIYLVMAFLAARLL 348 Query: 351 LLMIKKKYTK 360 L + K Sbjct: 349 YLHGRSNSPK 358 >gi|218710648|ref|YP_002418269.1| hypothetical protein VS_2728 [Vibrio splendidus LGP32] gi|218323667|emb|CAV19979.1| hypothetical permease [Vibrio splendidus LGP32] Length = 368 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 53/360 (14%), Positives = 119/360 (33%), Gaps = 23/360 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + + + S +++L I G +P + Sbjct: 4 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFISVLADASDGDIPASLVLSIVGLNMPAMGL 63 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+++++ TG LI+ L+LA++ + + + Sbjct: 64 LMLPLSIYIGILLTFGRLYAESEIVVMNATGIGNKFLIQSALYLALITATVAAFNSFWLS 123 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + ++Q+ + + L + F R D + + N L +F+ R Sbjct: 124 PWSQDKVEQMYEEVAAENSVDLLPKGKFARTPDGSSVVFIEGIDGNQLDNVFVSQMRPRD 183 Query: 183 THK-----IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + RQ I++ DG H P D + F+ Y Sbjct: 184 SVLPSVMFSKSGDVKELSDGRQVIVMYDGTRHEGVPSRLDYRVTHFEEYEGLIGQREVEK 243 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L+ ++E R++ + L++++ A Sbjct: 244 KGREWEAIPTIDLI----------GNQDNRAKAELQWRMSL---VLCIPLLTMLVVPLSA 290 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-----PYYIPILYLFLFCISSIFLL 352 + ++ + I ++ I F S IE+ PI L LF + Sbjct: 291 VNPRQGRFAKIGPAILIYLTYFLAISATKSSIEEGDIPAAIGMWPINALLLFVAIGANFM 350 >gi|227114630|ref|ZP_03828286.1| putative permease [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|227327172|ref|ZP_03831196.1| putative permease [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 358 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 41/355 (11%), Positives = 111/355 (31%), Gaps = 2/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + + + +V ++ +I+ + ++ V S + +P + + Sbjct: 5 LDRYIGKTIFTTIMTTLFMLVSLSGIIKFVDQLRKVGQGEYSALGAGLYTLLSVPKDIEI 64 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 65 FFPMAALLGALLGLGQLATRSELVVMQASGFTRLQIATAVMKTAIPLVLLTMAIGEWVSP 124 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + ++ + + L+ + +D + Sbjct: 125 QGEQMARNYRSQMISGGSMISTQGGLWAKDGNDFIYIERVTGDKELSGVNIYHFDDKNKL 184 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK-SYTLQTESANSSTIVLKA 242 + YA S + DR L+ + S + F + + L+ Sbjct: 185 LSVRYAASAEFEDDRNVWKLSQVDESDLSDGKQIGGSQTFSGEWKTNLTPDKLGVVALEP 244 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++ L N + Y+ ++ + + L+++ Sbjct: 245 DALSIRGLHN-YAKYLKQSGQESNRYQLNMWSKIFAPVSVAVMMLMAVSFIFGPLRSVSA 303 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I IS F + + + P + + + L++K++ Sbjct: 304 GSRIVIGISFGFLFYLLNEIFRPLSLVYGIPPILGAILPSSVFLFISVALLLKRR 358 >gi|254498610|ref|ZP_05111329.1| permease [Legionella drancourtii LLAP12] gi|254352150|gb|EET10966.1| permease [Legionella drancourtii LLAP12] Length = 354 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 39/357 (10%), Positives = 108/357 (30%), Gaps = 4/357 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + YI + + S + L +V + + + ++ + + +P Sbjct: 1 MRILDRYIAKTVLTSIGLVTLMLVGLQILFYLFDQLGDLGKLDYGITQAAFFVLMQMPYQ 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + L +M ++EL+++ +G S + + VL ++LL + + Sbjct: 61 VYLFFPMASLLGCLIGLGAMANHSELVVMRASGMSILQITGAVLKASVLLIFLVTVLGET 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + R +D N Sbjct: 121 VVPYLSHYANDYKTASVSGGQTIRTAKGFWLRHGNDFISVGRILPNNVLQNIYQFRFDEQ 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + Q + + + + + + + + Sbjct: 181 HHLKLARLIREAKY--SEQGWVAYNVQQTEFVVDHTRAQTFATLPWDVPVKPKILNISSI 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + ++ L L N + + Y+ F +R+ Q ++ +++I Sbjct: 239 EPDEMTLHEL-NRYIREQKRSHQNVHNYQFAFLQRIIQPFTTMVMMVLAIPFIFGPLRSS 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIKK 356 + ++ F + F + + Q P + FLF + ++L+ + Sbjct: 298 TMGSKLLVGAAVGFGFHILSRFFGPVSSVFQLPAGLAALGPTFLFALLGLYLMRRVR 354 >gi|148977743|ref|ZP_01814299.1| hypothetical protein VSWAT3_21150 [Vibrionales bacterium SWAT-3] gi|145962957|gb|EDK28227.1| hypothetical protein VSWAT3_21150 [Vibrionales bacterium SWAT-3] Length = 356 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 50/355 (14%), Positives = 125/355 (35%), Gaps = 2/355 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +LYI R I + + + V ++ +I+ ++++ V T L L IP + Sbjct: 3 KILDLYIGRTIIATTSLVLVTFVGLSGIIKYVEQLRKVGRGTYDLLQALYFVLLSIPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++ + VL AI L I + + Sbjct: 63 EMFFPMAALLGALIGLGMLAASSELVVMQAAGFSKLDIGFSVLKTAIPLMIVVTLLGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + + +A ++ + D + +I I K + + + Sbjct: 123 APQAQ-KMARDLRTISIAGGNIISTQSGVWARDANDFIFIVKIDDDKLYGMNMWRFDENK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 Y++ D + + ++ + + ++ + + +K Sbjct: 182 ALKTAIYSKEVDYVGDNVWTMKDVVVTSFENELQITKENLPTYTWKTSLAPDKLAIVTVK 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + +LS L + + + Y +++TQ + + L+++ Sbjct: 242 PEELSLSGLYD-YVSYLKASEQDAARYELALWRKITQPISIAVMMLMALSFIFGPLRSVT 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + +F + F + + Q P +L + + +L+ +K Sbjct: 301 MGARILSGVIAGFTFYISSEFFGPVSLVYQIPPAFGVLAPSVVFLGIAVMLLRRK 355 >gi|254282266|ref|ZP_04957234.1| permease YjgP/YjgQ family protein [gamma proteobacterium NOR51-B] gi|219678469|gb|EED34818.1| permease YjgP/YjgQ family protein [gamma proteobacterium NOR51-B] Length = 353 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 49/357 (13%), Positives = 109/357 (30%), Gaps = 5/357 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI R I +V + + I+ +S ++ G +P Sbjct: 1 MGKIDRYIGRAILGGTFAVLGVLVGLDALSTIVDEAEDLSDR-YGFIDMMSYVGLTLPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + PF + L + ++EL+++ + G S L V+ A+L ++ F+ + Sbjct: 60 IHEFMPFAALIGALVGLGRLAGSSELVVVRSAGVSIGQLAISVMKPALLAAVVGFVVGDF 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P A AQ + + + R + D Sbjct: 120 IAPSSEQLAITQRALAQRSESTVSARHGSWNRDGGTFIHVSAVQRGGVAYGLSLFSFDED 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + A+ G+ D +L + + + +S + Q V+ Sbjct: 180 KHLVRSLNAERGTYRGD--HWLLEEVVLTQLESEKTTVSQYLTWRWNTQITPDLLVLEVV 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + + L P + F +++TQ L L+++ Sbjct: 238 EPESLPVFKL-WPWAKFLEQQGLTATDIELAFWRKVTQPLAIAGLVLVAMSFIFGPLREG 296 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + + F + F + P + + LFC + + ++ ++ Sbjct: 297 SMGARIFAGVIVGVMFRISQDFFGPASVLFGLPPVLAAITPILFCWLA-GIWLLNRR 352 >gi|77457217|ref|YP_346722.1| permease YjgP/YjgQ [Pseudomonas fluorescens Pf0-1] gi|77381220|gb|ABA72733.1| putative ABC transport system, membrane protein [Pseudomonas fluorescens Pf0-1] Length = 373 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 52/365 (14%), Positives = 120/365 (32%), Gaps = 28/365 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + + ++ I + ++ + ++ L I GY +P + Sbjct: 2 IVFRYLSREVLLTLSAVSAVLLVIIMSGRFIKYLAQAAAGQLDPGSLFLIMGYRLPGFMQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ TG S+ L + LF A L+++ + + Sbjct: 62 LILPLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLFRMTLFPATLVAVVVAWLSLSLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFF--RLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + + L K F LE F R + + + L +FI Sbjct: 122 PQGANQFQLLLNKQDALTEFDTLEPGRFQALRDGTRVTYTETLSDDRVNLGSVFISQKNL 181 Query: 181 TQTHKI-----YYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 K A+ G + +IL++G + SP + + +++Y + Sbjct: 182 GANQKDRGISVLVAEKGRQEVRPDGNRYLILDNGYRYDGSPGQANYRAIHYETYGVLLPK 241 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + S V + S LL ++E RL+ L I L+++ Sbjct: 242 PDVSEEVTDRDAMPTSSLL----------GSDDIRSKTELQWRLSLPLLVFIVTLMAVPL 291 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-----PYYIPILYLFLFCIS 347 + ++ + + ++ + +E+ + +FL Sbjct: 292 ---SRVNPRQGRFLKLLPAILLYMAYLTILIAARGALEKGKIPPALGLWWVHAIFLTIGL 348 Query: 348 SIFLL 352 + Sbjct: 349 GLLYW 353 >gi|146283386|ref|YP_001173539.1| permease [Pseudomonas stutzeri A1501] gi|145571591|gb|ABP80697.1| predicted permease [Pseudomonas stutzeri A1501] Length = 373 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 44/366 (12%), Positives = 125/366 (34%), Gaps = 26/366 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + + ++ I + ++ + + +LL I G+ +P L Sbjct: 2 IVFRYLSRELLVTMSAVSAVLLVIIMSGRFIKYLAQAAQGVLDPGVLLLIMGFRLPGFLQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ TG S+ L+ + A L++ + + Sbjct: 62 LILPLGLFLGILLAYGRLYLESEMTVLSATGMSQRRLLAYSMAPAALVAALVGWLSLGLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFF--RLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + + ++ + F L F R + + L G+FI ++ Sbjct: 122 PQGIAEVDRILNQQDSLTEFDTLVPGRFQTLRGGSRVTYTRELSADRSELGGVFISETNV 181 Query: 181 TQTH---------KIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 ++ + + +IL +G + +P D +++ +Y + Sbjct: 182 SRQTGKESGLSVLVAESGRQEIQPDGSRYLILENGYRYDGNPGQADYRAIQYDTYGVLLP 241 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S + + LL +R+E H RL+ L + ++++ Sbjct: 242 KPEVSMELSEREAMPTRELL----------GSDNLRHRTELHWRLSLPLLVFVVTVLAVP 291 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSI 349 A + ++ + + ++ + + + + P + + ++ ++ Sbjct: 292 LA---KVNPRQGRFLKLLPAILLYMTYLALLIAVRGALDKGRLPMALGLWWVHGLFLAIG 348 Query: 350 FLLMIK 355 L++ Sbjct: 349 LLMLFW 354 >gi|189425645|ref|YP_001952822.1| permease YjgP/YjgQ family protein [Geobacter lovleyi SZ] gi|189421904|gb|ACD96302.1| permease YjgP/YjgQ family protein [Geobacter lovleyi SZ] Length = 379 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 62/344 (18%), Positives = 132/344 (38%), Gaps = 8/344 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y++R I F + + + ++++ + +V ++ L +L++ L+P+ L Sbjct: 4 RIINRYLMREIVGIFALGLTIFTLVLLMGRMVKLMEMVVANGVPLAEVLRLILLLLPSFL 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P F + ++ + E+ ++ G S TL+ PVL A ++ + Sbjct: 64 VLTIPMAFLLAVLLAFGRLSNDNEITVLKACGLSLGTLLPPVLLTAAAAALLTLFISVVA 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRD 180 P + KQ++ S + E +F + + + +Y+ T+Q + I DSRD Sbjct: 124 VPWGNTGFKQMTMDVARKYAASAIRERIFRDDLPGIVLYVDQYDEARRTMQRVMIQDSRD 183 Query: 181 TQTHKIYYAQSGSIDLDRQAIILN----DGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + +A+SG + D +L +G +H + D ++ F Y L ES S+ Sbjct: 184 PERPLTIFAKSGLVSSDEVNGVLRILLKNGSIH--TQHKNDYRLVSFGEYLLTAESGRST 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V D + L + +P P+ +E H R +F ++++ Sbjct: 242 PPVRTELDLGIGELQRGS-RSPQLAPQARLKMATELHSRFAFPCATFVFAILALPLGLSN 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY 340 + + L + + + + K P L Sbjct: 301 RRSGKGSGFTISILILLVYYVLLSFLRTLAEKGGIPPALAVWLP 344 >gi|78184805|ref|YP_377240.1| permease [Synechococcus sp. CC9902] gi|78169099|gb|ABB26196.1| possible permease [Synechococcus sp. CC9902] Length = 384 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 51/377 (13%), Positives = 130/377 (34%), Gaps = 21/377 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + ++L I L + + I ++ + + + L++ IP+ Sbjct: 12 LSLLDRWLLAEIAAPLLFAVAAFTVLGLSIGVMFELARRLVDGLPILVALQLLLLNIPSF 71 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P T + ++ N+EL + + G S I L+ P L L+ILL+ F+ ++ Sbjct: 72 LVLSLPMATLFATLLAYSKLSSNSELTALRSLGVSTIRLVVPALALSILLTGLTFVFNDV 131 Query: 121 IEPKCRST-------------IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN 167 I P+ + + + + ++ Sbjct: 132 IVPRANTQAEITLQRGLGRALATERGKDITFNSFGKIYDPKTQTSSTGLRQLFYARRYEG 191 Query: 168 NTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 + + ++D +++ A+ + + +G+V +P + + + F Sbjct: 192 GEMLDVTLLDFSRADYRQMWIAERAVYNESKAMWEFFNGQVLTLNP-NGSTTRLAFDENF 250 Query: 228 LQTESANSS--TIVLKANDQNLSFLLNPNPNNPNYRP-ELLETYRSEFHKRLTQWLFPVI 284 S + AND LS ++ N + R ++ + + ++ Sbjct: 251 YPLSSGPLQVAELPDDANDMTLSQAISAEKVESNAGNIKAARKLRVRIQEKFSFPMACIV 310 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 FGLI + + + +S+ + G ++ S + + P L +L Sbjct: 311 FGLIGSSLGARPGS--RTSRSQGFGVSILLILG-YYALSVSFSSLGVSGILPPFLAAWLP 367 Query: 345 CISSIFL-LMIKKKYTK 360 + S+ ++ ++ ++ Sbjct: 368 VLISLGAGGLLLRQASR 384 >gi|71908693|ref|YP_286280.1| permease YjgP/YjgQ [Dechloromonas aromatica RCB] gi|71848314|gb|AAZ47810.1| permease YjgP/YjgQ [Dechloromonas aromatica RCB] Length = 362 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 46/361 (12%), Positives = 122/361 (33%), Gaps = 7/361 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + ++ Y++R S + + + + + V + S+ +P + Sbjct: 5 LNLYQRYLIRETFASVFLVLAAFLALFAFFNFIDELRTVGKAGYSVVHAALFVALSMPGL 64 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + T L+++ R++E+ ++ +G + L+ + A+LL++ F+ Sbjct: 65 VYELIPIATLIGTLYALSTLARHSEITVLRASGLATSDLLMTLFRAALLLALLTFVIGEA 124 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P K++ AKA + ++ + D +I I K P+ L+G+ I Sbjct: 125 VVPFSERLGKEIRAKALSTVIAQSGFDSGLWVKDGRSFINIRKAAPDEPLEGVRIYHFSQ 184 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + D L + + + + + +++ Sbjct: 185 QNLLESVTDAQAADFEDPDLWRLRGVVRTVLEGDTSRVESTQTGEWRSTVTPTLLAALMV 244 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 +L LLN + + E Y K++ L ++ +++ + R Sbjct: 245 SPERMSLFGLLN-YTKHLTENKQKTERYEIALWKKVVYPLAALVMVALALPFGY--SHNR 301 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF----LLMIKK 356 IF + + + + N + I + + L +++ Sbjct: 302 VGGVSLKIFAGVMLGILFYALNGLSSNLGAINSWSPIISATAPSGLFLLVATGMLWWVER 361 Query: 357 K 357 + Sbjct: 362 R 362 >gi|146292282|ref|YP_001182706.1| permease YjgP/YjgQ family protein [Shewanella putrefaciens CN-32] gi|145563972|gb|ABP74907.1| permease YjgP/YjgQ family protein [Shewanella putrefaciens CN-32] gi|319425582|gb|ADV53656.1| inner membrane component of lipopolysaccharide transporter, LptF [Shewanella putrefaciens 200] Length = 370 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 62/371 (16%), Positives = 136/371 (36%), Gaps = 25/371 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R + ++ + L ++ I ++ + S ++++ + G IP ++ Sbjct: 2 IVFRYLIREVFKAQIAVLLVLLTIFISQHFVRILADASDGEFPASLIVTLIGLNIPALVV 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + M E++I+ G S + + L LA++ +F + Sbjct: 62 LVLPLSLFLGILVAHGRMYSENEMVILHGVGVSEWYVTRVTLILAVVNMLFTGYLSLYVT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS---- 178 P Q+ KAQ + L + F + + + + V Sbjct: 122 PWAEEQQNQVLEKAQSEAGLAALVQGRFQASPNGRAVLFVERIGKDNELEKVFVAQLPDP 181 Query: 179 -RDTQTHKIYYAQSGSIDLDRQ---AIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 +T + A++G + D + LN+G ++ SP KD +++F Y +Q + Sbjct: 182 SDETGVTNVVVAKNGRVLEDNMGAQQLQLNNGVRYQGSPRLKDYQMIEFGGYKMQIKEQQ 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 K + ++ LL +EFH RL L I LI++ A Sbjct: 242 VDERRRKLSALTVTDLL----------KVESAEAVAEFHWRLAIPLAIPIMTLIAVPLA- 290 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLL 352 + ++ K + ++ + G F + P Y+ + ++ L + L Sbjct: 291 --RVNVRQGKFAKMLPAVLLYLGYFGLMVAGRKALQDGVIPQYLGMWWIHLSALIMGIFL 348 Query: 353 MIKKK--YTKI 361 + K + + ++ Sbjct: 349 LGKDRPLFARL 359 >gi|152985629|ref|YP_001346669.1| hypothetical protein PSPA7_1284 [Pseudomonas aeruginosa PA7] gi|150960787|gb|ABR82812.1| membrane protein, putative [Pseudomonas aeruginosa PA7] Length = 355 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 43/356 (12%), Positives = 111/356 (31%), Gaps = 3/356 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + L I+ +A + + +N +S+S + L+ P Sbjct: 1 MVKLDRYIGVTVFVAILAVLGVILGLALLFAFIDELNDISAS-YGIGEALRFIALTAPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ N+EL I+ G S ++ V+ ++L + + Sbjct: 60 AYDMLPMAALIGCLVGLGTLASNSELTIMRAAGVSLSRIVWAVMKPMLVLMLAGILVGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A AQ + L+ R + + Sbjct: 120 VAPWTENIAQSGRALAQGGGDSQSSKRGLWHRQGREYIHINAVQPNGVLYGVTRYRFDEQ 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 +A+ + D + + ++ + + + Q +T+V+ Sbjct: 180 RGLQSASFAKRARFETDHWQLEDVTTTLLHPQEKRSEVVKLPTERWDAQLSPQLLNTVVM 239 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + ++S L + + Y F ++ Q L L++I Sbjct: 240 EPEALSISGL-WQYIHYLADQGLNNNRYWLAFWTKVLQPLVTAALVLMAISFIFGPLRSV 298 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + + F + + P + ++ + + L ++++ Sbjct: 299 TLGQRIFTGVLVGFVFRIAQDLLGPSSLVFDFPPLLAVV-IPASACALAGLWLLRR 353 >gi|86147550|ref|ZP_01065860.1| putative permease [Vibrio sp. MED222] gi|85834589|gb|EAQ52737.1| putative permease [Vibrio sp. MED222] Length = 366 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 53/360 (14%), Positives = 119/360 (33%), Gaps = 23/360 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + + + S +++L I G +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFISVLADASDGDIPASLVLSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+++++ TG LI+ L+LA++ + + + Sbjct: 62 LMLPLSIYIGILLTFGRLYAESEIVVMNATGIGNKFLIQSALYLALITATVAAFNSFWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + ++Q+ + + L + F R D + + N L +F+ R Sbjct: 122 PWSQDKVEQMYEEVAAENSVDLLPKGKFARTPDGSSVVFIEGIDGNQLDNVFVSQMRPRD 181 Query: 183 THK-----IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + RQ I++ DG H P D + F+ Y Sbjct: 182 SVLPSVMFSKSGDVKELSDGRQVIVMYDGTRHEGVPSRLDYRVTHFEEYEGLIGQREVEK 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L+ ++E R++ + L++++ A Sbjct: 242 KGREWEAIPTIDLI----------GNQDNRAKAELQWRMSL---VLCIPLLTMLVVPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-----PYYIPILYLFLFCISSIFLL 352 + ++ + I ++ I F S IE+ PI L LF + Sbjct: 289 VNPRQGRFAKIGPAILIYLTYFLAISATKSSIEEGDIPAAIGMWPINALLLFVAIGANFM 348 >gi|253702061|ref|YP_003023250.1| permease YjgP/YjgQ family protein [Geobacter sp. M21] gi|251776911|gb|ACT19492.1| permease YjgP/YjgQ family protein [Geobacter sp. M21] Length = 360 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 53/358 (14%), Positives = 119/358 (33%), Gaps = 9/358 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI R + + + I V+ +++++ + + S L IP + Sbjct: 1 MTILTRYIARAYLKMLSLCLGSFLTIYLVVDFMEKVSRFTRAGASWKHLALFFITKIPEM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P M T L +++ +EL I + G S + P+L +++L+S+ + Sbjct: 61 IIDAAPLAVLMATLLTLGTLSLTSELTAIRSCGVSLFRISLPILVISVLMSLGVLAIGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI--VDS 178 + PK + + + S ++ + + + I D Sbjct: 121 VLPKSFAQRTYIQEVLIQKKSASAFFRQQNIWFREEGTVLRASLFEPARNELKGITLWDL 180 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK-SYTLQTESANSST 237 + + ++ L + +L D V + + + LQ + A+ T Sbjct: 181 QPGTGEPLKRTEADLALLGPKGWVLRDAVVRQFRDGEVSATQKYRELPVQLQLKPADLKT 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ +L L N Y ++ H R++ + + I A + Sbjct: 241 LGKYSDSMSLVEL-NRYCRKLRASGYDPTRYVTQMHSRISMPFGCAVMAFLGIPFALRGG 299 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF--LFCISSIFLLM 353 R + +S+ + F S II + Q P++ + F + Sbjct: 300 --RSSGIAFGVGLSIGVGFLYVIVNSVIIS-VGQVGLLPPVVAAWATNFIFFVAGAWL 354 >gi|315634607|ref|ZP_07889891.1| YjgP/YjgQ family membrane protein [Aggregatibacter segnis ATCC 33393] gi|315476555|gb|EFU67303.1| YjgP/YjgQ family membrane protein [Aggregatibacter segnis ATCC 33393] Length = 355 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 45/357 (12%), Positives = 114/357 (31%), Gaps = 3/357 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + E YI + I + + +V ++ +I+ +++ V T + + + +P Sbjct: 1 MNTLERYIGKSILGTIFATLFMLVGLSAIIKFVEQFRSVGKGTYDILQAIAYTVLTMPKD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ +EL+++ ++G SRI + V+ I L + + Sbjct: 61 VETFFPMAALLGALIALGNLASRSELVVMQSSGFSRIRIGIAVMKTTIPLVLLTMVIGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + ++ +N + D + ++ + + + L I+I Sbjct: 121 GIPQT-EQFARDMRSKAISGGSMLSVKNGIWAKDGNNFVYVRSISDDVELNDIYIYTFN- 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 Q + + L R P + + L Sbjct: 179 EQRQLEKMKHANQASFNNGKWTLRQVNESRIQPDEVVTINRLNEDWETNLTPDKLGVASL 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + ++S L N + + + ++L Q + + ++++ Sbjct: 239 RPTSLSISGLSN-YIAFLKETGQDSRNFELTYWRKLLQPVSVGVMMMLALSFIFGPLRSV 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I IS F V + I L + + + L+ +++ Sbjct: 298 TAGARILIGISFGFLFYVVNELFGKFSLVYNTTPLIGALMPSVLFLLITWWLLARRR 354 >gi|310822424|ref|YP_003954782.1| hypothetical protein STAUR_5183 [Stigmatella aurantiaca DW4/3-1] gi|309395496|gb|ADO72955.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 371 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 58/367 (15%), Positives = 136/367 (37%), Gaps = 11/367 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+L+ + + F+ + +V+Q L ++ S +L + ++ YL P Sbjct: 1 MILLARYLLKELLAPLGVWVAFMFLLLFVMQFLLGTEVLLGSAVTLTDIGRLILYLTPHF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P F M L ++ + EL + G S + L+ + + +LL+ + + Sbjct: 61 LVKALPIAFLMAILLGLGRLSEDRELTALQALGISPVQLLLGPMAIGLLLAGLMALLAFT 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 +P +++K+L + ++ +F+ DL + + + + + D R Sbjct: 121 AQPWGLTSVKELVNEVIKKNVAGDVKSGVFYEDLSDLTLYAERVSREGGEWTHVLLHDDR 180 Query: 180 DTQTHKIYYAQSGSIDLDRQ----AIILNDGEVHRKSPISKDISIMKFKSYTLQTE---- 231 + + + AQ G + + ++L +GEVHR + + D S+++F+ + Sbjct: 181 EPSSPLLVLAQRGRVSMREGDEALRLVLEEGEVHRATRSTADYSLLRFEQGEISVGLGGS 240 Query: 232 -SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 + S+ + + + L+ + H RL + P+ F L+ Sbjct: 241 MNRKSNRFRSQKEEMSPGELIQA-AEEAEKSGGNPRPFLMAIHMRLGNAVAPLSFALLGT 299 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 A R + + + + F + ++ + L LF + + Sbjct: 300 PLAIGRKQAGRAWGYLLTLSGYVLFYVLSRVFETLGNQEKLPMVLAAQLPNILFSVLGVV 359 Query: 351 LLMIKKK 357 + + Sbjct: 360 AMWRVSR 366 >gi|146283385|ref|YP_001173538.1| permease [Pseudomonas stutzeri A1501] gi|145571590|gb|ABP80696.1| predicted permease [Pseudomonas stutzeri A1501] Length = 353 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 114/356 (32%), Gaps = 5/356 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + LM IV +A + + + V + L L+ P Sbjct: 1 MVKLDRYIGIHVFLAILMVLGIIVGLALLFAFIDELGDV-QGSYGLGDALQYVLLTSPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L ++ ++EL I+ G S ++ V+ ++L + + Sbjct: 60 LYEMLPMAALIGCLIGLGTLASSSELTIMRAAGVSLGRIVLSVMKPMLVLLVAGILIGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + AQ A + L+ R +++ + + + Sbjct: 120 VAPLSEDIAQARRSLAQGAGEAQSSKRGLWHRQENEFVHVNAVQPGGVLVGVTRYRFDEE 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + +A+ S D L + ++ + + +Q T+V+ Sbjct: 180 RRLLSSSFARRASYQGD--HWRLENIATTHFRGDHTEVMRAPEERWDVQLTPQLLGTVVM 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + +++ L + + Y F ++ Q V L++I Sbjct: 238 EPEALSITGL-WRYIHYLGEQGLNNSRYWLAFWTKVLQPAVTVALVLLAISFIFGPLRSV 296 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + + F + ++ + ++ L + I ++++ Sbjct: 297 TLGQRIFTGVVVGFVFRIIQDLLGPASQVFGFSPLLAVV-LPACVCALIGAWLLRR 351 >gi|113953439|ref|YP_730497.1| membrane protein, YjgP/YjgQ family protein [Synechococcus sp. CC9311] gi|113880790|gb|ABI45748.1| putative membrane protein, YjgP/YjgQ family protein [Synechococcus sp. CC9311] Length = 392 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 52/375 (13%), Positives = 136/375 (36%), Gaps = 21/375 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQ-ILQRINLVSSSTESLNILLKISGYLIPTVL 61 + ++L + L + ++ + + + + S I +++ +P+ L Sbjct: 22 LIDRWLLGELIGPLLFALTAFTVVSLSVGVMFDLVRKIVESNLPWTIAVQVLLLKLPSFL 81 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P M + + ++ N+EL + + G + +I P + LA+L++ F+ ++I Sbjct: 82 VISFPMATLMASLLAYSRLSANSELTALRSVGVTASRMIAPAIALALLMTSLSFLFNDVI 141 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL------------YIKISKYNPNNT 169 P+ + + +A + +++ + + + ++ + T Sbjct: 142 VPRTNRSAEFTLQRALGKAIAAEKGDDIVYSRFGRVAEPDGKSSKGLTQLFYAREFEDGT 201 Query: 170 LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ 229 + G+ ++D ++ A + + NDG++ +P S F Y Sbjct: 202 MIGVTVLDLSRFGFTQMLVADKAKWNQSQAKWEFNDGQILTLTPSGSTTS-ADFDRYLYP 260 Query: 230 TESANSST--IVLKANDQNLSFLLNPNPNNPNY-RPELLETYRSEFHKRLTQWLFPVIFG 286 A + AN+ +S + + + R ++ T + ++FG Sbjct: 261 LSPAPLRIAKLPKDANNMTVSEAIEAEQLLSDAGDRKEARRLRVRIQEKFTVPMACLVFG 320 Query: 287 LISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF-LFC 345 LI K + + IS+ + F V++ S+ + P L + Sbjct: 321 LIGSSLGAKP--NSRTSRSQGFGISVVLIF-VYYVLSFSFSSLGVKGTLAPFLAAWGPVL 377 Query: 346 ISSIFLLMIKKKYTK 360 IS ++ ++ ++ Sbjct: 378 ISLAGGGVLLRQASR 392 >gi|59711022|ref|YP_203798.1| inner membrane protein [Vibrio fischeri ES114] gi|59479123|gb|AAW84910.1| conserved inner membrane protein [Vibrio fischeri ES114] Length = 358 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 47/356 (13%), Positives = 119/356 (33%), Gaps = 2/356 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I + + + +V ++ +I+ ++++ V T L L +P + Sbjct: 3 KILDWYIGRTIIATSALCLVTLVGLSSIIKYVEQLRKVGRGTYDLLDALYFVILSMPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++++ VL AI L + + Sbjct: 63 EMFFPMAALLGALIGLGMLAASSELVVMQAAGYSKLSIGVSVLKTAIPLMLMVMALGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + L + + ++ + DD N + Sbjct: 123 APQAQKMARDLRTFEVSGGNIAAVRAGVWAKDADDFIYLARVENKEKLYGVTVWQFDDNQ 182 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEV-HRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + +A++ + + +ND + K + ++ + + + Sbjct: 183 DLNNVIFARTATYQAAQDDWKMNDVSITQMKDKAVISEKKVDSLDWSTTLTPDKLAVVTV 242 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K +Q+L+ L + N Y F ++ Q + + L+++ Sbjct: 243 KPEEQSLTGLYD-YVNYLKDSELDASRYELAFWRKALQPISVAVMMLLALSFVFGPLRSV 301 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + +F + + + L L ++ L+ +K Sbjct: 302 TMGARILSGVIAGFTFYISNEVFGPMTLVYNIHPIFGALGPSLVFLAVTVGLLNRK 357 >gi|213968383|ref|ZP_03396527.1| membrane protein [Pseudomonas syringae pv. tomato T1] gi|213927021|gb|EEB60572.1| membrane protein [Pseudomonas syringae pv. tomato T1] Length = 378 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 46/366 (12%), Positives = 116/366 (31%), Gaps = 26/366 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + + ++ + ++ + +S +L I G+ +P L Sbjct: 5 IVFRYLSREVLLTLSAVSAVLLVFIMSGRFIKYLAQAASGALDPGVLFLIMGFRLPGFLQ 64 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ TG S+ L+ + A L+ + + + Sbjct: 65 VILPLGLFLGILMAYGRLYLESEMTVLAATGMSQQRLLAITMGPAALVGLLVAWLSFSLA 124 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFF--RLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + QL + F L F R + + L G+FI + R Sbjct: 125 PQGAAQFSQLINQQDAMTEFDTLVPGRFQALRDGTRITYTKELSEDRSQLAGVFISEKRM 184 Query: 181 TQTHKIYYAQSGSIDLDRQ---------AIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 + + + +IL +G + +P + D ++K+ +Y Sbjct: 185 SNDKSKDNGITVLVAEKGHQEVQPNGSRFLILENGYRYDGNPGAADYRVVKYDTYGAALP 244 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S + S L +E R++ L I L++I Sbjct: 245 KPEISEEITDREAIPTSELF----------GNPAPRSVAELQWRISLPLSVFIVTLMAIP 294 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSI 349 + ++ + + ++ + + + + P + + ++ + Sbjct: 295 L---SRVNPRQGRYLKLLPAILLYMSYLAILISVRSSLEKGKLPLSLGMWWVHGIYLGIG 351 Query: 350 FLLMIK 355 +L Sbjct: 352 LVLFYW 357 >gi|197335786|ref|YP_002155171.1| permease YjgP/YjgQ family protein [Vibrio fischeri MJ11] gi|197317276|gb|ACH66723.1| permease YjgP/YjgQ family protein [Vibrio fischeri MJ11] Length = 358 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 47/356 (13%), Positives = 120/356 (33%), Gaps = 2/356 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I + + + +V ++ +I+ ++++ V T L L +P + Sbjct: 3 KILDWYIGRTIIATSALCLVTLVGLSSIIKYVEQLRKVGRGTYDLLDALYFVILSMPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++++ VL AI L + + Sbjct: 63 EMFFPMAALLGALIGLGMLAASSELVVMQAAGYSKLSIGVSVLKTAIPLMLMVMALGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + L + + ++ + DD N + Sbjct: 123 APQAQKMARDLRTFEVSGGNIAAVRAGVWAKDADDFIYLARVENKEKLYGVTVWQFDDNQ 182 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEV-HRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + + +A++ + + +ND + K + ++ + + + Sbjct: 183 ELNNVIFARTATYQAAQDDWEMNDVSITQMKDKAVISEKKVDSLDWSTTLTPDKLAVVTV 242 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K +Q+L+ L + N Y F ++ Q + + L+++ Sbjct: 243 KPEEQSLTGLYD-YVNYLKDSELDASRYELAFWRKALQPISVAVMMLLALSFVFGPLRSV 301 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + +F + + + L L ++ L+ +K Sbjct: 302 TMGARILSGVIAGFTFYISNEVFGPMTLVYNIHPIFGALGPSLVFLAVTVGLLNRK 357 >gi|294139610|ref|YP_003555588.1| hypothetical protein SVI_0839 [Shewanella violacea DSS12] gi|293326079|dbj|BAJ00810.1| conserved hypothetical protein [Shewanella violacea DSS12] Length = 370 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 62/365 (16%), Positives = 137/365 (37%), Gaps = 23/365 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R + ++ + L ++ I ++ + S ++++ + G +P +L Sbjct: 2 IVFRYLIREVLKAQIAVLLVLLAIFISQHFVRVLADASDGEFPASLVMTLLGLNLPYLLV 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + M ++E++I+ G S + + L LA+ IF + + Sbjct: 62 LVIPLSLFLGILMAHGRMYADSEMVILHGVGVSEWYITRVTLLLAVGNMIFTAMLSVYVT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-----D 177 P Q+ AQ + + + F + + + N V Sbjct: 122 PWAEERQNQVLENAQSEAGLAAITQGRFQTSPNGRAVLFVERIGRNNELQKVFVAQLPDP 181 Query: 178 SRDTQTHKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 ++ I A+ G + D Q + L+DG ++ P D I++F Y +Q + Sbjct: 182 DDESGMSNIVVAEGGKVIEDDTGGQRLQLSDGVQYQARPKHVDFQIIEFGGYQMQIKEQP 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 K + ++ L++ + +EFH RL L + LI++ A Sbjct: 242 VDERRRKLSAMPINDLMDID----------GPAATAEFHWRLAIPLAIPLMTLIAVPMA- 290 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN--PYYIPILYLFLFCISSIFLL 352 + ++ K +F ++ + G F +E P Y+ + ++ + LL Sbjct: 291 --RVNVRQGKFAKMFPAILLYLGYFGLMIAGRKALEDGVVPEYLGMWWIHASALFLGILL 348 Query: 353 MIKKK 357 + K++ Sbjct: 349 LSKER 353 >gi|302037952|ref|YP_003798274.1| putative YjgP/YjgQ family permease [Candidatus Nitrospira defluvii] gi|300606016|emb|CBK42349.1| putative Permease, YjgP/YjgQ family [Candidatus Nitrospira defluvii] Length = 363 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 58/365 (15%), Positives = 127/365 (34%), Gaps = 9/365 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+LR + F M ++ I VI +++ +L +P + Sbjct: 1 MNILFRYMLREYVKIFGMCFAGLMTIYLVIDFFEKVRRFLRYDAHALDVLAYFVLKMPAI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P M T + ++R+ E+ + + G S + P LFL +L++ LF + Sbjct: 61 SYQIAPLAVLMATLLTIGLLSRSHEITAMRSCGISLYWITSPFLFLGTVLALVLFAFSST 120 Query: 121 IEPKCRST--IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 + P + + + + A+ S + L + I +P + + Sbjct: 121 VIPLALAKAEQIKTTRIEKRAVPVSVKAAQPWVSLGGQTLMNIDTIDPGGAVLRKIRLYR 180 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 A++ Q +L DG +S+ F++ L Sbjct: 181 LSPTFELEQIAEAQRAVYSPQGWVLEDGIRRSF-RQDGTVSVNSFQTEPLPLAQIPDDFT 239 Query: 239 VLKANDQNLSFL--LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 D L + + + +L ++++ R+ I ++ I + +R Sbjct: 240 TWLELDSETMTLPEIRAYVDRLHLGGTILPRLLTDYYGRIAFPCVTFIMVVVGIALSLRR 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF---LFCISSIFLLM 353 VR I ++++ F +W + + + P+L + L ++ F L+ Sbjct: 300 TGVRGSGMAMGIGQAMAVGFF-YWSTHSVAIALGRGGALAPMLAGWMANLVFLTFGFYLL 358 Query: 354 IKKKY 358 +K +Y Sbjct: 359 LKVRY 363 >gi|330962173|gb|EGH62433.1| hypothetical protein PMA4326_26812 [Pseudomonas syringae pv. maculicola str. ES4326] Length = 375 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 48/366 (13%), Positives = 117/366 (31%), Gaps = 29/366 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + + ++ + ++ + +S +L I G+ +P L Sbjct: 2 IVFRYLSREVLLTLSAVSAVLLVFIMSGRFIKYLAQAASGALDPGVLFMIMGFRLPGFLQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ TG S+ L+ + A L+ + + + Sbjct: 62 VILPLGLFLGILMAYGRLYLESEMTVLAATGMSQQRLLAITMGPAALVGLVVAWLSFSLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFF--RLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + QL + F L F R + + + L G+FI + R Sbjct: 122 PQGAAQFSQLINQQDAMTEFDTLVPGRFQALRDGTRITYTKELSDDRSQLTGVFISEKRM 181 Query: 181 TQTHKIYYAQSGSIDLDRQ---------AIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 + + + +IL +G + +P + D ++K+ +Y Sbjct: 182 SSDKSKDNGITVLVAEKGHQEVQPNGSRFLILENGYRYDGNPGAADYRVIKYDTYGTALP 241 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S V S L +E R++ L I L++I Sbjct: 242 KPEISEEVTDREAIPTSELF----------GNRTARSVAELQWRISLPLSVFIVTLMAIP 291 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-----NPYYIPILYLFLFCI 346 + ++ + + ++ + + +E+ + + ++L Sbjct: 292 L---SRVNPRQGRYLKLLPAILLYMSYLAILISVRSSLEKGKLPLSLGMWWVHAIYLAIG 348 Query: 347 SSIFLL 352 +F Sbjct: 349 LVLFYW 354 >gi|313200016|ref|YP_004038674.1| permease [Methylovorus sp. MP688] gi|312439332|gb|ADQ83438.1| permease YjgP/YjgQ family protein [Methylovorus sp. MP688] Length = 356 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 46/360 (12%), Positives = 122/360 (33%), Gaps = 8/360 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+ + I S ++ + ++ + ++Q + + T LN +L P Sbjct: 1 MKLLNRYLTQEIVSSIMLIMVALLAMFSFFDLIQELESIGKGTYGLNKVLVFVLLSAPGH 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + T L ++R++EL+I+ +G S T+ + +L + ++ ++ F Sbjct: 61 VYEVVPVAVLVGTMYALGQLSRHSELIILRVSGISIATIARSLLKVGLIFAVITFFVGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P T ++L +A ++ L+ + + + Sbjct: 121 VTPYSEKTAQRLRIQATDSVVAQDFRSGLWVKDGRSFVNVEEVMPDSGLMNIHIYEFDDS 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 I A++G D + L D + + + + +++ Sbjct: 181 FHLRTISDAKTGRF--DGENWHLKDVQQTHFLDKTVKSEFFPQAQWQSLIRPELLNVLLV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + L ++ + + + ++ L ++ ++++ R Sbjct: 239 VPEKMSAWNLYF-YIHHLSANKQKTSRHEIALWSKMVYPLASLVMVVLALPFGFL--QQR 295 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQN---PYYIPILYLFLFCISSIFLLMIKKK 357 IF + + +H N P ++ LF ++ + +L + ++ Sbjct: 296 SGGASAKIFAGIMLGIVYQVLNRVFVHLGLLNDWSPLMSAVVPTLLFLLAGLTMLFMAER 355 >gi|70728449|ref|YP_258198.1| YjgP/YjgQ family permease [Pseudomonas fluorescens Pf-5] gi|68342748|gb|AAY90354.1| permease, YjgP/YjgQ family [Pseudomonas fluorescens Pf-5] Length = 372 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 51/351 (14%), Positives = 120/351 (34%), Gaps = 23/351 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R I + ++ I + ++ + +S L I G+ +P L Sbjct: 2 IVFRYLSREILLTLSAVSAVLLVIIMSGRFVKFLAQAASGALDPGSLFLIMGFRLPGFLQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ TG S+ L+ + A L+++ + + Sbjct: 62 LILPLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLLGMTMIPAALVALLVAWLSLSLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFF--RLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + + L K F L F + L G+FI + R Sbjct: 122 PQGANQFQLLLNKQDALTEFDTLVAGRFQALNDGTRVTYTEQLSEDRTNLGGVFISEKRL 181 Query: 181 TQTHKI-----YYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 Q K A+ G + +IL +G + +P + ++K+ +Y + E Sbjct: 182 GQQKKDEGISVLVAEKGHQDIRPDGNRYLILENGYRYDGNPGEANYRVIKYDTYGVLLER 241 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + S V + + L+ + R+E RL+ L I L+++ Sbjct: 242 PDVSDEVTDRDAMPTADLI----------GKDDLRARAELQWRLSLPLLVFIVTLMAVPL 291 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 + ++ + + ++ + + +E+ + ++ Sbjct: 292 ---SRVNPRQGRFLKLIPAILLYMAYLTILIAVRGALEKGKISPALGLWWV 339 >gi|28868483|ref|NP_791102.1| hypothetical protein PSPTO_1272 [Pseudomonas syringae pv. tomato str. DC3000] gi|301384649|ref|ZP_07233067.1| hypothetical protein PsyrptM_18512 [Pseudomonas syringae pv. tomato Max13] gi|302058898|ref|ZP_07250439.1| hypothetical protein PsyrptK_02842 [Pseudomonas syringae pv. tomato K40] gi|302133011|ref|ZP_07259001.1| hypothetical protein PsyrptN_16554 [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28851721|gb|AAO54797.1| membrane protein, putative [Pseudomonas syringae pv. tomato str. DC3000] gi|330963184|gb|EGH63444.1| hypothetical protein PSYAC_00750 [Pseudomonas syringae pv. actinidiae str. M302091] gi|331015232|gb|EGH95288.1| hypothetical protein PLA106_04717 [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 375 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 46/366 (12%), Positives = 116/366 (31%), Gaps = 26/366 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + + ++ + ++ + +S +L I G+ +P L Sbjct: 2 IVFRYLSREVLLTLSAVSAVLLVFIMSGRFIKYLAQAASGALDPGVLFLIMGFRLPGFLQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ TG S+ L+ + A L+ + + + Sbjct: 62 VILPLGLFLGILMAYGRLYLESEMTVLAATGMSQQRLLAITMGPAALVGLLVAWLSFSLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFF--RLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + QL + F L F R + + L G+FI + R Sbjct: 122 PQGAAQFSQLINQQDAMTEFDTLVPGRFQALRDGTRITYTKELSEDRSQLAGVFISEKRM 181 Query: 181 TQTHKIYYAQSGSIDLDRQ---------AIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 + + + +IL +G + +P + D ++K+ +Y Sbjct: 182 SNDKSKDNGITVLVAEKGHQEVQPNGSRFLILENGYRYDGNPGAADYRVVKYDTYGAALP 241 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S + S L +E R++ L I L++I Sbjct: 242 KPEISEEITDREAIPTSELF----------GNPAPRSVAELQWRISLPLSVFIVTLMAIP 291 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSI 349 + ++ + + ++ + + + + P + + ++ + Sbjct: 292 L---SRVNPRQGRYLKLLPAILLYMSYLAILISVRSSLEKGKLPLSLGMWWVHGIYLGIG 348 Query: 350 FLLMIK 355 +L Sbjct: 349 LVLFYW 354 >gi|22124661|ref|NP_668084.1| hypothetical protein y0748 [Yersinia pestis KIM 10] gi|45440497|ref|NP_992036.1| hypothetical protein YP_0645 [Yersinia pestis biovar Microtus str. 91001] gi|51594885|ref|YP_069076.1| membrane protein, permease [Yersinia pseudotuberculosis IP 32953] gi|108808931|ref|YP_652847.1| hypothetical protein YPA_2940 [Yersinia pestis Antiqua] gi|108810814|ref|YP_646581.1| hypothetical protein YPN_0649 [Yersinia pestis Nepal516] gi|145600503|ref|YP_001164579.1| hypothetical protein YPDSF_3249 [Yersinia pestis Pestoides F] gi|153949000|ref|YP_001402495.1| permease [Yersinia pseudotuberculosis IP 31758] gi|153997519|ref|ZP_02022619.1| putative membrane protein [Yersinia pestis CA88-4125] gi|162420587|ref|YP_001608340.1| hypothetical protein YpAngola_A4049 [Yersinia pestis Angola] gi|165925751|ref|ZP_02221583.1| putative permease [Yersinia pestis biovar Orientalis str. F1991016] gi|166010149|ref|ZP_02231047.1| putative permease [Yersinia pestis biovar Antiqua str. E1979001] gi|166214265|ref|ZP_02240300.1| putative permease [Yersinia pestis biovar Antiqua str. B42003004] gi|167399516|ref|ZP_02305040.1| putative permease [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167423672|ref|ZP_02315425.1| putative permease [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170025892|ref|YP_001722397.1| permease YjgP/YjgQ family protein [Yersinia pseudotuberculosis YPIII] gi|186893895|ref|YP_001871007.1| permease YjgP/YjgQ family protein [Yersinia pseudotuberculosis PB1/+] gi|218930455|ref|YP_002348330.1| hypothetical protein YPO3439 [Yersinia pestis CO92] gi|229839083|ref|ZP_04459242.1| conserved inner membrane protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229896571|ref|ZP_04511738.1| conserved inner membrane protein [Yersinia pestis Pestoides A] gi|229899646|ref|ZP_04514787.1| conserved inner membrane protein [Yersinia pestis biovar Orientalis str. India 195] gi|229901017|ref|ZP_04516141.1| conserved inner membrane protein [Yersinia pestis Nepal516] gi|270489197|ref|ZP_06206271.1| inner membrane family protein [Yersinia pestis KIM D27] gi|294505143|ref|YP_003569205.1| hypothetical protein YPZ3_3034 [Yersinia pestis Z176003] gi|21957470|gb|AAM84335.1|AE013676_8 hypothetical protein y0748 [Yersinia pestis KIM 10] gi|45435354|gb|AAS60913.1| putative membrane protein [Yersinia pestis biovar Microtus str. 91001] gi|51588167|emb|CAH19773.1| putative membrane protein, permease [Yersinia pseudotuberculosis IP 32953] gi|108774462|gb|ABG16981.1| membrane protein [Yersinia pestis Nepal516] gi|108780844|gb|ABG14902.1| putative membrane protein [Yersinia pestis Antiqua] gi|115349066|emb|CAL22028.1| putative membrane protein [Yersinia pestis CO92] gi|145212199|gb|ABP41606.1| membrane protein [Yersinia pestis Pestoides F] gi|149289156|gb|EDM39236.1| putative membrane protein [Yersinia pestis CA88-4125] gi|152960495|gb|ABS47956.1| putative permease [Yersinia pseudotuberculosis IP 31758] gi|162353402|gb|ABX87350.1| putative permease [Yersinia pestis Angola] gi|165922363|gb|EDR39540.1| putative permease [Yersinia pestis biovar Orientalis str. F1991016] gi|165991056|gb|EDR43357.1| putative permease [Yersinia pestis biovar Antiqua str. E1979001] gi|166204497|gb|EDR48977.1| putative permease [Yersinia pestis biovar Antiqua str. B42003004] gi|167052020|gb|EDR63428.1| putative permease [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057842|gb|EDR67588.1| putative permease [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169752426|gb|ACA69944.1| permease YjgP/YjgQ family protein [Yersinia pseudotuberculosis YPIII] gi|186696921|gb|ACC87550.1| permease YjgP/YjgQ family protein [Yersinia pseudotuberculosis PB1/+] gi|229682356|gb|EEO78448.1| conserved inner membrane protein [Yersinia pestis Nepal516] gi|229687138|gb|EEO79213.1| conserved inner membrane protein [Yersinia pestis biovar Orientalis str. India 195] gi|229695449|gb|EEO85496.1| conserved inner membrane protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700349|gb|EEO88381.1| conserved inner membrane protein [Yersinia pestis Pestoides A] gi|262363204|gb|ACY59925.1| hypothetical protein YPD4_3021 [Yersinia pestis D106004] gi|270337701|gb|EFA48478.1| inner membrane family protein [Yersinia pestis KIM D27] gi|294355602|gb|ADE65943.1| hypothetical protein YPZ3_3034 [Yersinia pestis Z176003] Length = 358 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 49/355 (13%), Positives = 116/355 (32%), Gaps = 3/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI R I + LM+ L +V ++ +I+ + ++ V S + IP + + Sbjct: 5 LDRYIGRTILNTILMTLLMLVSLSGIIKFVDQLRKVGQGDYSAASAGMYTILSIPKDIAV 64 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L ++ +EL+++ +G +R+ + V+ AI L + + P Sbjct: 65 FFPMAALLGALLGLGTLASRSELVVMQASGFTRMQIAASVMKTAIPLVLLTMAIGEWVAP 124 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + T + + + + L+ + D + ++ + Sbjct: 125 QGEQTARNFRTQQMYGGSLLSTQSGLWAKDGSDFIYIQRVSGESELTGVNIYHFDKEDRL 184 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + YA + + + D + L+ + +P S + + + Sbjct: 185 LSVRYAATATYEKDNKTWRLSQVDESDLSNPTQVTGSQTLTGEWKTNLTPEKLGVVAMDP 244 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S L + + Y ++ + L+++ Sbjct: 245 DSLSISGL-HDYSKYLQQSGQESNRYELSMWSKVFAPFSVAVMMLMALSFIFGPLRSVPM 303 Query: 303 KKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 I F V F + P +L LF + SI LL+ ++ Sbjct: 304 GVRVVTGIFFGFVFYVLDQVFGRLSLVYGIPPMLGALLPSMLFLLISICLLLKRR 358 >gi|253997950|ref|YP_003050013.1| permease [Methylovorus sp. SIP3-4] gi|253984629|gb|ACT49486.1| permease YjgP/YjgQ family protein [Methylovorus sp. SIP3-4] Length = 356 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 46/360 (12%), Positives = 122/360 (33%), Gaps = 8/360 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+ + I S ++ + ++ + ++Q + + T LN +L P Sbjct: 1 MKLLNRYLTQEIVSSIMLIMVALLAMFSFFDLIQELESIGKGTYGLNKVLMFVLLSAPGH 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + T L ++R++EL+I+ +G S T+ + +L + ++ ++ F Sbjct: 61 VYEVVPVAVLVGTMYALGQLSRHSELIILRVSGISIATIARSLLKVGLIFAVITFFVGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P T ++L +A ++ L+ + + + Sbjct: 121 VTPYSEKTAQRLRIQATDSVVAQDFRSGLWVKDGRSFVNVEEVMPDSELMNIHIYEFDDT 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 I A++G D + L D + + + + +++ Sbjct: 181 FHLRTISDAKTGRF--DGENWHLKDVQQTHFLDKTVKSEFFPQAQWQSLIRPELLNVLLV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + L ++ + + + ++ L ++ ++++ R Sbjct: 239 VPEKMSAWNLYF-YIHHLSANKQKTSRHEIALWSKMVYPLASLVMVVLALPFGFL--QQR 295 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQN---PYYIPILYLFLFCISSIFLLMIKKK 357 IF + + +H N P ++ LF ++ + +L + ++ Sbjct: 296 SGGASAKIFAGIMLGIVYQVLNRVFVHLGLLNDWSPLMSAVVPTLLFLLAGLTMLFMAER 355 >gi|330873094|gb|EGH07243.1| hypothetical protein PSYMP_02391 [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 375 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 46/366 (12%), Positives = 117/366 (31%), Gaps = 26/366 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + + ++ + ++ + +S +L I G+ +P L Sbjct: 2 IVFRYLSREVLLTLSAVSAVLLVFIMSGRFIKYLAQAASGALDPGVLFLIMGFRLPGFLQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ TG S+ L+ + A+L+ + + + Sbjct: 62 VILPLGLFLGILMAYGRLYLESEMTVLAATGMSQQRLLAITMGPAVLVGLLVAWLSFSLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFF--RLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + QL + F L F R + + L G+FI + R Sbjct: 122 PQGAAQFSQLINQQDAMTEFDTLVPGRFQALRDGTRITYTKELSEDRSQLAGVFISEKRM 181 Query: 181 TQTHKIYYAQSGSIDLDRQ---------AIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 + + + +IL +G + +P + D ++K+ +Y Sbjct: 182 SNDKSKDNGITVLVAEKGHQEVQPNGSRFLILENGYRYDGNPGAADYRVVKYDTYGAALP 241 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S + S L +E R++ L I L++I Sbjct: 242 KPEISEEITDREAIPTSELF----------GNPAPRSVAELQWRISLPLSVFIVTLMAIP 291 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSI 349 + ++ + + ++ + + + + P + + ++ + Sbjct: 292 L---SRVNPRQGRYLKLLPAILLYMSYLAILISVRSSLEKGKLPLSLGMWWVHGIYLGIG 348 Query: 350 FLLMIK 355 +L Sbjct: 349 LVLFYW 354 >gi|123440875|ref|YP_001004866.1| hypothetical protein YE0502 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122087836|emb|CAL10622.1| putative membrane protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 356 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 46/354 (12%), Positives = 112/354 (31%), Gaps = 2/354 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI R I + LM+ +V ++ +I+ + ++ V S + IP + + Sbjct: 5 LDRYIGRTILNTILMTLFMLVSLSGIIKFVDQLRKVGQGDYSAASAGMYTLLSIPKDIEI 64 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L ++ +EL+++ +G +R+ + V+ AI L + + P Sbjct: 65 FFPMAALLGALLGLGTLATRSELVVMQASGFTRMQIAASVMKTAIPLVLLTMAIGEWVAP 124 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + + Q+ ++ + D +I I + + + L G+ I Sbjct: 125 QG-EQMARNFRAQQMYGGSLLSTQSGLWAKDGSDFIYIQRVSGDKELTGVNIYHFDQQDR 183 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 + + D + E +P S + + + + Sbjct: 184 LLSVRYAATATFEDNLWRLSQVDESDLSNPNKVTGSQTLTGEWKTNLTPEKLGVVAMNPD 243 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 ++S L + + Y ++ + L+++ Sbjct: 244 SLSISGL-HDYSKYLRQSGQESSRYELNMWGKIFAPFSVAVMMLMALSFIFGPLRSVPMG 302 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I F V + + P I L + + L++K++ Sbjct: 303 VRVVTGIFFGFVFYVLDQIFGPLSLVYSIPPVIGALLPSILFLLISVYLLLKRR 356 >gi|56461046|ref|YP_156327.1| permease [Idiomarina loihiensis L2TR] gi|56180056|gb|AAV82778.1| Predicted permease [Idiomarina loihiensis L2TR] Length = 356 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 44/355 (12%), Positives = 117/355 (32%), Gaps = 3/355 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI + R+ L+S + ++ +I+ ++++ V ++ Y +P + Sbjct: 3 SILDKYIGLSVLRTSLLSLAVLTGLSSLIRFVEQLKAVGRGDYNVMDAALFVFYSLPRDV 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + + + N+EL+++ G SR+ +I V+ AI++ + + I Sbjct: 63 ETFFPMAALLGGLIGVGMLASNSELVVMMAAGRSRLNIIGAVMKSAIIMMVAVMAIGEWI 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + + ++A + ++ ++ + D I + L + I D D Sbjct: 123 APPMEAQGRAIRSQAISGGSLISAQQGVWAKDGSDFIN-IGEVEDTGRLNDVLIYDFNDN 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + + + + + V + I + + +K Sbjct: 182 RELQKVTYAR-TANFSGDKWRMQQVTVTQLDDIRMLRDEKPSMVWQSSLTPDKLGVVTIK 240 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 +++ LL+ + E Y ++L + + L+++ Sbjct: 241 PESLSITGLLD-YLTYLESNQQSAERYELALWRKLFAPITVAVMLLVALSFIFGPLRSTT 299 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + F V + ++ Q P + L + M + Sbjct: 300 MGARILLGVITGFGFHVSNEIFGPLAQVYQIPAILGALLPSILFAGVAVYFMRGR 354 >gi|192359904|ref|YP_001981938.1| putative permease, YjgP/YjgQ family superfamily [Cellvibrio japonicus Ueda107] gi|190686069|gb|ACE83747.1| putative permease, YjgP/YjgQ family superfamily [Cellvibrio japonicus Ueda107] Length = 366 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 52/366 (14%), Positives = 137/366 (37%), Gaps = 21/366 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + + L + I + ++ + ++++L I Y + +L Sbjct: 2 IIFRYLSRDLLLTSLAVSAVLFTIFLTGKFSDYLDDAAQGKLAVDVLFTIIAYRMTGLLE 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + M ++E++++ G S L+ L + L++ + + + Sbjct: 62 LILPLGFYLAILLAYGRMYMDSEMVVLSACGISPGQLVGMTLVPSALIAAIVALFSFWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTL--QGIFIVDSRD 180 P +Q A+ + F ++ F L + + ++ Q +F+ Sbjct: 122 PLGAQLTEQTLAEQRNRSEFESMQPGRFQSLGQGKIMAYVESLSDDNRLLQHVFVAHQEG 181 Query: 181 TQTHKIYYAQSGSID----LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANS 235 + I A++G+ ++ ++LN G ++ P + + +I +F+ + + Sbjct: 182 PDSSAIVVAETGTQMYRPDYGQRYLVLNQGYRYQGKPGTNEFTITRFEDWGRYLPPTTSV 241 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + I LK++ + + L N + R++ + +I L+++ Sbjct: 242 AEIELKSDAKTTAQLFRAEDNES----------IATLQWRISMPIMVLIATLLAVP--LS 289 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + RQ + + + L F + + + + N +++ I LLMI Sbjct: 290 KTNPRQGRYLKMLPAILVYVFYLTFLINARSAITKGNLNPALGMWVVHLPFLVIALLMIN 349 Query: 356 KKYTKI 361 + ++ Sbjct: 350 --WHRL 353 >gi|327481779|gb|AEA85089.1| permease [Pseudomonas stutzeri DSM 4166] Length = 373 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 45/366 (12%), Positives = 125/366 (34%), Gaps = 26/366 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + + ++ I + ++ + + +LL I G+ +P L Sbjct: 2 IVFRYLSRELLITMSAVSAVLLVIIMSGRFIKYLAQAAQGVLDPGVLLLIMGFRLPGFLQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ TG S+ L+ L A L++ + + Sbjct: 62 LILPLGLFLGILLAYGRLYLESEMTVLSATGMSQRRLLAYSLAPAALVAALVGWLSLGLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFF--RLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + + ++ + F L F R + + L G+FI ++ Sbjct: 122 PQGIAEVDRILNQQDSLTEFDTLVPGRFQTLRGGSRVTYTRELSADRSELGGVFISETNV 181 Query: 181 TQTH---------KIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 ++ + + +IL +G + +P D +++ +Y + Sbjct: 182 SRQTGKESGLSVLVAESGRQEIQPDGSRYLILENGYRYDGNPGQADYRAIQYDTYGVLLP 241 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S + + LL +R+E H RL+ L + ++++ Sbjct: 242 KPEVSMELSEREAMPTRELL----------GSDNLRHRTELHWRLSLPLLVFVVTVLAVP 291 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSI 349 A + ++ + + ++ + + + + P + + ++ ++ Sbjct: 292 LA---KVNPRQGRFLKLLPAILLYMTYLALLIAVRGALDKGRLPMALGLWWVHGLFLAIG 348 Query: 350 FLLMIK 355 L++ Sbjct: 349 LLMLFW 354 >gi|86607080|ref|YP_475843.1| YjgP/YjgQ family protein [Synechococcus sp. JA-3-3Ab] gi|86555622|gb|ABD00580.1| putative membrane protein, YjgP/YjgQ family [Synechococcus sp. JA-3-3Ab] Length = 392 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 59/364 (16%), Positives = 124/364 (34%), Gaps = 12/364 (3%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 E Y+ + + R F + + Q+ +L+ +L I +P +L + Sbjct: 31 LEFYLCKEMIRPFFLGVAGGTVMMLGNQLFIYADLLVKKGAPPLTILHILLLNLPAILVV 90 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P T L M ++E+ + G ++ PVL + +L+S ++ +I P Sbjct: 91 TFPIAGLFATLLTLGRMGADSEITALRAAGIPYRKVLIPVLCIGLLVSGLALLTNEVIVP 150 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + +K L+ LA + R+DDDL+ + +P ++ R +T Sbjct: 151 ETNQKVKTLNTNLILAQDALPFDSEEIVRVDDDLWFHVGSIDPKTGWMRDLLILDRKAET 210 Query: 184 HKIYYAQ---SGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + Y Q + + QA L D + R + + L + + Sbjct: 211 GHLRYPQVISAQTAHQVGQAWHLQDVVIRRYDERGRTYYEGQVAEMELNIVNKLVGLVYA 270 Query: 241 K--ANDQNLSFLLNPNPNNPNYRPELLE--TYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + +Q + L + + +E+H + L L++ Sbjct: 271 EKVPQEQRAAELWEQCQRYRAEQRPSADVARCLTEYHLKFAIPLASFFAILVAAPLGL-- 328 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFS---YIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 VRQ + + +++ + F + S + +P+ L +F LL Sbjct: 329 QTVRQTGRYGSVALAIVLVFIYYVLMSLGRAMGRVEHIDPWLAAWLPNMIFGGVGFSLLW 388 Query: 354 IKKK 357 + Sbjct: 389 RFLR 392 >gi|254242519|ref|ZP_04935841.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|126195897|gb|EAZ59960.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] Length = 372 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 45/365 (12%), Positives = 125/365 (34%), Gaps = 25/365 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + + ++ I + ++ + + L I + IP L Sbjct: 2 IVFRYLSREVLVTMSAVSAVLLVIIMSGRFIKYLAQAAQGLLDPGSLFLIMAFRIPGFLQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ TG S+ L+ + A+L++I + + Sbjct: 62 LILPLGLFLGILLAYGRLYLESEMTVLSATGMSQKRLLGYTMAPALLVAILVAWLSLFLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P+ + L K F L F + D + ++ + + I S+ Sbjct: 122 PQGINQFALLLNKQDTLTEFDTLVPGRFQAMRDGTRVTYTEELSKDRGELAGIFISQKDL 181 Query: 183 THKIYYAQSGSIDLDR----------QAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 + ++ + +IL++G + +P + +++ +Y + Sbjct: 182 NSSNQERGISILVAEKGTQNIQADGSRYLILHNGYRYDGNPGQANYRAIQYDTYGVMLPK 241 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 +S+ V + + + L Y++E RL+ L + L+++ Sbjct: 242 PEASSEVSERDAVPTADLF----------GSDNPRYQAELQWRLSTPLLVFVVTLLAV-- 289 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIF 350 + ++ + + ++ + G + ++ + P I + ++ ++ Sbjct: 290 -PLSRVNPRQGRFLKLLPAILLYMGYLALLIAVRGQLDKGKIPMAIGLWWVHGLFLAIGL 348 Query: 351 LLMIK 355 LL Sbjct: 349 LLFYW 353 >gi|220906932|ref|YP_002482243.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 7425] gi|219863543|gb|ACL43882.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 7425] Length = 374 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 57/366 (15%), Positives = 131/366 (35%), Gaps = 15/366 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQIL-QRINLVSSSTESLNILLKISGYLIPTVL 61 + YIL + FL +A I ++ + ++ + +L + L+I G +P + Sbjct: 9 IIDRYILAEMAMPFLFGVAVFTLLAATIGVVFDLLRWLADNRLTLAVALQILGLRLPEFI 68 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + V ++ R +EL+ + G S L P+L + LL+ F I Sbjct: 69 ILALPMSMLLTPLLVFNTLGRRSELVALQGCGVSVYRLALPILLVGFLLAGLTFGLNETI 128 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLY---IKISKYNPNNTLQGIFIVDS 178 P+ Q+ A + E+N+F+R D I ++ +Q I I++ Sbjct: 129 APQTNYQALQIQTAALRRPQQKFREKNIFYREFVDNTLSRIFYARQFDGQQMQRITILNF 188 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + +I A + D ++ G V+ +P ++ S + + + S+ + Sbjct: 189 DQGKLDQIIVANAAEWDQKQKHWDFQQGTVYSLTPNTESSSYTSIQPFQVTQLPLPSTPL 248 Query: 239 VLKANDQNLSFLLNPNPNNPNY------RPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 L + + + + + ++ ++ V+FGLI Sbjct: 249 QLATETRKIEQMNRWEATQFLRAIEQTGDQKWIRRWKVGIQEKNAFPFTCVVFGLIGAAL 308 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF--LFCISSIF 350 + + +SL++ F ++ + + + P+L + Sbjct: 309 GLSS--YNRSQTSRGFGLSLAMIFA-YYLLNSTCISLGEGGLLSPLLAAWLSPLVGLLTG 365 Query: 351 LLMIKK 356 ++ + Sbjct: 366 GWLLFR 371 >gi|260914417|ref|ZP_05920886.1| YjgP/YjgQ family membrane protein [Pasteurella dagmatis ATCC 43325] gi|260631518|gb|EEX49700.1| YjgP/YjgQ family membrane protein [Pasteurella dagmatis ATCC 43325] Length = 358 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 43/357 (12%), Positives = 118/357 (33%), Gaps = 3/357 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + + Y+ + I + + + +V ++ +I+ +++ LV T + + + +P Sbjct: 4 MNTLDRYLGKSILGAIFATLIMLVGLSGIIKFVEQFRLVGKGTYDIWQAIAYTVLTMPKD 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + L ++ +EL+++ +G SR+ + V+ AI L I Sbjct: 64 VETFFPMAALLGSLIALGNLASRSELIVMQASGFSRLKIGLAVMKTAIPLVIITMAIGEW 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + + + F+ + +I + + + L I+I + Sbjct: 124 GIPQT-EQFARDMRSKAMTGGSLLSVRDGFWAKEGSDFIYVKRITDDLELNDIYIYSFGE 182 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + K ++ + +L+ +P + N L Sbjct: 183 NRQLKQVKHADSAVYEEG-KWVLHQLNESEITPDEIKTVNRLNSEWKTSLTPDNLGIASL 241 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + ++S L N + + + + ++L Q + + ++++ Sbjct: 242 RPTSLSISGLSN-YIAFLKDTGQESKKFELTYWRKLFQPISVGVMMMLALSFIFGPLRSV 300 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I F V + + L + + + L+ +K+ Sbjct: 301 TAGARIVTGIFFGFLFYVVNEIFGPLSLVYNVAPLAGALMPSVMFLLITWWLLSRKR 357 >gi|162146455|ref|YP_001600914.1| hypothetical protein GDI_0631 [Gluconacetobacter diazotrophicus PAl 5] gi|209543542|ref|YP_002275771.1| permease YjgP/YjgQ family protein [Gluconacetobacter diazotrophicus PAl 5] gi|161785030|emb|CAP54574.1| putative membrane protein [Gluconacetobacter diazotrophicus PAl 5] gi|209531219|gb|ACI51156.1| permease YjgP/YjgQ family protein [Gluconacetobacter diazotrophicus PAl 5] Length = 357 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 55/357 (15%), Positives = 116/357 (32%), Gaps = 2/357 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK F+ YI R+FL+ L + + +++ + ++ V L + L P Sbjct: 1 MKRFDRYIQMVTLRAFLLVALGLTALFSLLEFVDQLAFVGQGHYRLADAAAYTALLGPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 VTP + L + +++EL + G S +I VL L + + + LF+ Sbjct: 61 FMQVTPIAMLLACLLGLGGLAKHSELTALQGIGLSEARIISAVLRLVVPIVMVLFLLAQF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P R ++ A A + T ++ F+ D Y+ + ++ I I Sbjct: 121 VVPGTRQMAQEGRAAALASATQKDDQDQAFWAHGDQQYLSVRRFPSETQADDIDIYRFAA 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + Y + + L D S + ++ S + L Sbjct: 181 DGSMTSYLHAARAQIGADDVWTLRDVTRKDIVADQFHTSQLDSMAWHAFLSSRQIRFLSL 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 L + Y E R++ + + + Sbjct: 241 PPESVPPIALYR-YIQDLKRHHLPAMRYEQELWARISMPFAMIALIACAAPFVFGPPRSQ 299 Query: 301 QRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 I ++++I F + S + + NP + L +S+ ++ + + Sbjct: 300 NVGYRMAIGVAIAIVFSLGQEITSRLGLLFDLNPALTALTPSVLLMMSAAYVFIHTR 356 >gi|225075101|ref|ZP_03718300.1| hypothetical protein NEIFLAOT_00100 [Neisseria flavescens NRL30031/H210] gi|224953585|gb|EEG34794.1| hypothetical protein NEIFLAOT_00100 [Neisseria flavescens NRL30031/H210] Length = 356 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 43/354 (12%), Positives = 120/354 (33%), Gaps = 8/354 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +I+ + + + + + + +P Sbjct: 1 MDLISRYIIRQMAVMAVYALLAFLALYSFFEIINEVGDLGKGSYNGTTMAQYVLMQMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + +EL +I +G S ++ + ++ +I Sbjct: 61 AYELMPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKILLILSQFGLIFAIATATLGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + + A A + + + + I + + P++TL GI I D Sbjct: 121 IAPVLSQKAENIKAAAINGKISTGN--TGLWLKEKNSIINVREMLPDHTLLGIKIWARND 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ + + L + S ++S +++ + + +++ Sbjct: 179 KNELTQATEAESAVLNNDGSWQLKNIRRSTLSEDKVEVSTAAEENWPIAVKRNLMDVLLV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K + ++ L ++ + + Y + ++L + + L++ R Sbjct: 239 KPDQMSVGELT-TYISHLENNNQNTQIYAIAWWRKLVYPVAAWVMALVAFAF--TPQTTR 295 Query: 301 QRKKIHPIFISLSISFGVFW---GFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 +F + + + F + P+ L LF + +++L Sbjct: 296 HGNMGLKLFGGICLGLLFHFAGRLFGFTSQLYGVLPFLAGALPTVLFALLAVYL 349 >gi|297569343|ref|YP_003690687.1| permease YjgP/YjgQ family protein [Desulfurivibrio alkaliphilus AHT2] gi|296925258|gb|ADH86068.1| permease YjgP/YjgQ family protein [Desulfurivibrio alkaliphilus AHT2] Length = 398 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 56/352 (15%), Positives = 117/352 (33%), Gaps = 11/352 (3%) Query: 11 CIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFA 70 + F + L I I ++ +++ ++ + + L +I Y+ P +L P Sbjct: 15 EMLAPFFAALLVINAILFLGRLIPLLDEIFALGLGLGDFARICLYMSPRLLLFSLPMACM 74 Query: 71 METTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIK 130 M T MN + E++ + +G ++ PVL L + ++ ++ ++ PK Sbjct: 75 MGVIIAFTRMNGDYEIMALKASGIGLYRMLPPVLLLGAVTALLTLVTATVLIPKSTIATN 134 Query: 131 QLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQ 190 QL + N F + + + + P+N +G+++ D RD A Sbjct: 135 QLFWHLAKTKVEQGVRPNTFSEGLPQVVLYVEEVTPDNAWRGVYLSDLRDPDHPVTVMAP 194 Query: 191 SGSIDLD----RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 G + D R + L+DG +HR + + + Sbjct: 195 DGQLQADTAGSRIMLTLHDGTMHRAVQEKTQTIHFGRYHLEIPLTPPAAFADRTGRHGMT 254 Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 L +TY E+H+RL I ++ I Q Sbjct: 255 QDEL-RQTAAKLGPEHSRYKTYLIEYHQRLVLPAGAFILAMLGITLTLLSRTPHQ----A 309 Query: 307 PIFISLSISFGVFWGFSYIIHKIEQNPYYI--PILYLFLFCISSIFLLMIKK 356 +SF ++ + + P ++L + + + +K Sbjct: 310 LGVPLGLLSFIAYYVLLTAAKTLAEGGQLPLGPAMWLPNLVFAIFTVYLTRK 361 >gi|332160138|ref|YP_004296715.1| hypothetical protein YE105_C0514 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318607296|emb|CBY28794.1| putative Permease [Yersinia enterocolitica subsp. palearctica Y11] gi|325664368|gb|ADZ41012.1| hypothetical protein YE105_C0514 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330859698|emb|CBX70034.1| lipopolysaccharide export system permease protein lptG [Yersinia enterocolitica W22703] Length = 356 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 46/354 (12%), Positives = 112/354 (31%), Gaps = 2/354 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI R I + LM+ +V ++ +I+ + ++ V S + IP + + Sbjct: 5 LDRYIGRTILNTILMTLFMLVSLSGIIKFVDQLRKVGQGDYSAASAGMYTLLSIPKDIEI 64 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L ++ +EL+++ +G +R+ + V+ AI L + + P Sbjct: 65 FFPMAALLGALLGLGTLATRSELVVMQASGFTRMQIAASVMKTAIPLVLLTMAIGEWVAP 124 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + + Q+ ++ + D +I I + + + L G+ I Sbjct: 125 QG-EQMARNFRAQQMYGGSLLSTQSGLWAKDGSDFIYIQRVSGDKELTGVNIYHFDKQDR 183 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 + + D + E +P S + + + + Sbjct: 184 LLSVRYAATATFEDNLWRLSQVDESDLSNPNKVTGSQTLTGEWKTNLTPEKLGVVAMNPD 243 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 ++S L + + Y ++ + L+++ Sbjct: 244 SLSISGL-HDYSKYLRQSGQESSRYELNMWGKIFAPFSVAVMMLMALSFIFGPLRSVPMG 302 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I F V + + P I L + + L++K++ Sbjct: 303 VRVVTGIFFGFVFYVLDQIFGPLSLVYNIPPVIGALLPSILFLLISVYLLLKRR 356 >gi|15599023|ref|NP_252517.1| hypothetical protein PA3828 [Pseudomonas aeruginosa PAO1] gi|116051856|ref|YP_789301.1| hypothetical protein PA14_14500 [Pseudomonas aeruginosa UCBPP-PA14] gi|218889888|ref|YP_002438752.1| putative permease [Pseudomonas aeruginosa LESB58] gi|254236732|ref|ZP_04930055.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|296387656|ref|ZP_06877131.1| putative permease [Pseudomonas aeruginosa PAb1] gi|313109247|ref|ZP_07795215.1| hypothetical protein PA39016_001710056 [Pseudomonas aeruginosa 39016] gi|9950003|gb|AAG07215.1|AE004800_4 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] gi|115587077|gb|ABJ13092.1| putative permease [Pseudomonas aeruginosa UCBPP-PA14] gi|126168663|gb|EAZ54174.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|218770111|emb|CAW25873.1| putative permease [Pseudomonas aeruginosa LESB58] gi|310881717|gb|EFQ40311.1| hypothetical protein PA39016_001710056 [Pseudomonas aeruginosa 39016] Length = 372 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 45/365 (12%), Positives = 125/365 (34%), Gaps = 25/365 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + + ++ I + ++ + + L I + IP L Sbjct: 2 IVFRYLSREVLVTMSAVSAVLLVIIMSGRFIKYLAQAAQGLLDPGSLFLIMAFRIPGFLQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ TG S+ L+ + A+L++I + + Sbjct: 62 LILPLGLFLGILLAYGRLYLESEMTVLSATGMSQKRLLGYTMAPALLVAILVAWLSLFLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P+ + L K F L F + D + ++ + + I S+ Sbjct: 122 PQGINQFALLLNKQDTLTEFDTLVPGRFQAMRDGTRVTYTEELSKDRGELAGIFISQKDL 181 Query: 183 THKIYYAQSGSIDLDR----------QAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 + ++ + +IL++G + +P + +++ +Y + Sbjct: 182 NSSNQERGISILVAEKGTQNIQADGSRYLILHNGYRYDGNPGQANYRAIQYDTYGVMLPK 241 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 +S+ V + + + L Y++E RL+ L + L+++ Sbjct: 242 PEASSEVSERDAVPTADLF----------GSDNPRYQAELQWRLSTPLLVFVVTLLAV-- 289 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIF 350 + ++ + + ++ + G + ++ + P I + ++ ++ Sbjct: 290 -PLSRVNPRQGRFLKLLPAILLYMGYLALLIAVRGQLDKGKIPMAIGLWWVHGLFLAIGL 348 Query: 351 LLMIK 355 LL Sbjct: 349 LLFYW 353 >gi|172036942|ref|YP_001803443.1| putative permease YjgP/YjgQ [Cyanothece sp. ATCC 51142] gi|171698396|gb|ACB51377.1| putative permease YjgP/YjgQ [Cyanothece sp. ATCC 51142] Length = 394 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 44/362 (12%), Positives = 128/362 (35%), Gaps = 20/362 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPT 59 + + Y+ + FL + + + + V+ S L++ +KI +P Sbjct: 20 LSIMDRYLFIELLLPFLFGMGIFTSLGLSIGTLFDLVRRVTESGLMLSVAMKILVLKMPG 79 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + + P + + ++ ++E++ + + G S LI PV+ ++++ FI + Sbjct: 80 FVSLAFPMAMLLAALMAYSRLSSDSEIIALRSLGVSVYRLIIPVILFGLVVTGCAFIVND 139 Query: 120 IIEPKCRSTIKQLSAKAQL------------ALTFSYLEENLFFRLDDDLYIKISKYNPN 167 I P +A + ++E ++ + ++ Sbjct: 140 WIAPAATHEAAVTLQRAVNQERPDFKERNIVYPEYKTVQEEDGQQVTVLTRLFYAEEYNG 199 Query: 168 NTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 + +QG+ I+D ++I ++S + ++ +G ++ +P +I++F+ Sbjct: 200 DKMQGLTILDRTQEGVNQIVTSESATWNISSNTWDFFNGTIYLIAPDGSYRNIVRFQHQQ 259 Query: 228 LQTE--SANSSTIVLKANDQNLSFLLNPNPN-NPNYRPELLETYRSEFHKRLTQWLFPVI 284 L + + + ++ + + + + ++ +I Sbjct: 260 LALPRAPLDLANRRQNFTEMTIAQTQEYLKAMQLSGNEKRVRKVKVRLQEKYAMPFVCLI 319 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 FG++ + K + + + FG ++ +++ + P L +L Sbjct: 320 FGVVGAAIGVRPQNT---NKATSFGVCVGLIFG-YYLLAFMSTSLGIWGVLTPFLGAWLP 375 Query: 345 CI 346 I Sbjct: 376 NI 377 >gi|289523522|ref|ZP_06440376.1| membrane protein, YjgP/YjgQ family [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503214|gb|EFD24378.1| membrane protein, YjgP/YjgQ family [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 369 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 120/356 (33%), Gaps = 13/356 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQIL-QRINLVSSSTESLNILLKISGYLIPTV 60 + + +I+ +F+ + + +L +L+ S +I++++ Y +P V Sbjct: 9 RLLDKFIITEFYPTFVFGVMVFTVLLVAGDLLFDIADLLIQSRVPFSIVIRLFVYRLPGV 68 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + T + +EL + +G S +++PV +IL+ F + Sbjct: 69 IVLTLPMAALLATILSFGKLATQSELTALRASGISFYRILRPVFLASILIGGFALLLNET 128 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD----LYIKISKYNPNNTLQGIFIV 176 + P + S L+E +F + + D I I K P ++ Sbjct: 129 LVPLADRAADNIMRYEVARQKPSLLKEQMFLKEERDGALSRVIYIGKLFPQEGNMDDVLI 188 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 ++ + Q L +G+V + + F+ L + S Sbjct: 189 QEFESGEITRILTAKNGDWKEGQWW-LYNGQVFNVTKEGFVEPLFSFEKQQLSLPLSPSQ 247 Query: 237 --TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 T + L N N + + + H RL V+ L+ Sbjct: 248 VVTSSQDPKKMSAFELYN-YIKLMNVQGSDVNSLWVLLHLRLAVPWASVVLALVGASVGA 306 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 R+ I +S+ + F ++ F + Q Y P+L ++ + + Sbjct: 307 G---TRRSGSGMGIGVSILLVFA-YYVFMSFCRSLGQGGYIPPLLAAWMPNLIFLV 358 >gi|126658379|ref|ZP_01729528.1| hypothetical protein CY0110_27505 [Cyanothece sp. CCY0110] gi|126620311|gb|EAZ91031.1| hypothetical protein CY0110_27505 [Cyanothece sp. CCY0110] Length = 394 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 42/365 (11%), Positives = 128/365 (35%), Gaps = 20/365 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPT 59 + + Y+ + FL + + + + V+ S L++ ++I +P Sbjct: 20 LSIMDRYLFIELLLPFLFGMGIFTSLGLSIGTLFDLVRRVTESGLMLSVAMRILVLKMPG 79 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + + P + + ++ ++E++ + + G S LI PV+ ++++ FI + Sbjct: 80 FVSLAFPMAMLLAALMAYSRLSSDSEIIALRSLGVSVYRLIIPVILFGLVVTGCAFIVND 139 Query: 120 IIEPKCRSTIKQLSAKAQL------------ALTFSYLEENLFFRLDDDLYIKISKYNPN 167 I P +A + ++E + + ++ Sbjct: 140 WIAPAATHEAALTLQRAVNQERPDFKERNIVYPEYKTIQEEDGQQATVLTRLFYAEEYNG 199 Query: 168 NTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 + ++G+ I+D ++I ++S + ++ +G ++ +P +I++F+ Sbjct: 200 DKMKGLTILDRTQEGVNQIVTSESATWNISSNTWDFFNGTIYLIAPDGSYRNIVRFQHQQ 259 Query: 228 LQTE--SANSSTIVLKANDQNLSFLLNPNPN-NPNYRPELLETYRSEFHKRLTQWLFPVI 284 L + + + ++ + + + + ++ +I Sbjct: 260 LALPRAPLDLANRRQNFTEMTIAQTKEYLKAMQLSGDEKRVRKVKVRLQEKYAMPFVCLI 319 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 FG++ + K + + + FG ++ +++ + P L +L Sbjct: 320 FGVVGAAIGVRPQNT---NKATSFGVCVGLIFG-YYLLAFMSTSLGIWGILTPFLGAWLP 375 Query: 345 CISSI 349 I + Sbjct: 376 NILGL 380 >gi|86609743|ref|YP_478505.1| YjgP/YjgQ permease [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558285|gb|ABD03242.1| putative permease, YjgP/YjgQ family [Synechococcus sp. JA-2-3B'a(2-13)] Length = 362 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 58/361 (16%), Positives = 122/361 (33%), Gaps = 12/361 (3%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y+ + + R F + + Q+ +L+ +L I +P +L + P Sbjct: 4 YLFKEMIRPFFLGVAGGTVMMLGNQLFIYTDLLVKKGAPPLTILHILLLNLPAILVVTFP 63 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 T L M ++E+ + G + PVL + +L+S ++ +I P+ Sbjct: 64 IAGLFTTLLTLGKMGADSEITALRAAGIPYRKVFIPVLCIGLLISGLALLTNEVIVPETN 123 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 +K L+ LA R+DDDL+ + +P L ++ R +T + Sbjct: 124 QKVKILNKNLILAQDALLFNPEEIVRVDDDLWFHVGSIDPKTGLMQDLLILDRKAETGHL 183 Query: 187 YYAQ---SGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK-- 241 Y Q + + Q+ L D + R + + + L + + + Sbjct: 184 RYPQVISAQTAQQVGQSWQLRDVVIRRYDEQGRTYYEGQVEEMQLNIVNKLVGLVYAEKV 243 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLE--TYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 +Q L + + +E+H + L L++ V Sbjct: 244 PQEQRAGELWEQCQRYRAEQRPSADVARCLTEYHLKFAIPLASFFAILVAAPLGL--QTV 301 Query: 300 RQRKKIHPIFISLSISFGVFWGFS---YIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 RQ + + +++ + F + S + +P+ L +F LL Sbjct: 302 RQTGRYGGVALAIVLVFIYYVLMSLGRAMGRVEHIDPWLAAWLPNMIFGGVGFSLLWRFL 361 Query: 357 K 357 + Sbjct: 362 R 362 >gi|15599022|ref|NP_252516.1| hypothetical protein PA3827 [Pseudomonas aeruginosa PAO1] gi|116051855|ref|YP_789302.1| hypothetical protein PA14_14510 [Pseudomonas aeruginosa UCBPP-PA14] gi|218889889|ref|YP_002438753.1| putative permease [Pseudomonas aeruginosa LESB58] gi|254236731|ref|ZP_04930054.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|296387657|ref|ZP_06877132.1| putative permease [Pseudomonas aeruginosa PAb1] gi|313109246|ref|ZP_07795214.1| hypothetical protein PA39016_001710055 [Pseudomonas aeruginosa 39016] gi|9950002|gb|AAG07214.1|AE004800_3 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] gi|115587076|gb|ABJ13091.1| putative permease [Pseudomonas aeruginosa UCBPP-PA14] gi|126168662|gb|EAZ54173.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|218770112|emb|CAW25874.1| putative permease [Pseudomonas aeruginosa LESB58] gi|310881716|gb|EFQ40310.1| hypothetical protein PA39016_001710055 [Pseudomonas aeruginosa 39016] Length = 355 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 44/355 (12%), Positives = 109/355 (30%), Gaps = 2/355 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + L I+ +A + + +N +S+S + L+ P Sbjct: 1 MVKLDRYIGVTVFVAILAVLGVILGLALLFAFIDELNDISAS-YGIGDALRFIFLTAPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ N+EL I+ G S ++ V+ ++L + + Sbjct: 60 AYDMLPMAALIGCLVGLGTLASNSELTIMRAAGVSLSRIVWAVMKPMLVLMLAGILVGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A AQ + L+ R + + Sbjct: 120 VAPWTENIAQSGRALAQGGGDSQSSKRGLWHRQGREYIHINAVQPNGVLYGVTRYRFDEQ 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 +A+ + D + + ++ + + + Q +T+V+ Sbjct: 180 RGLESASFAKRARFETDHWQLEEVTTTLLHPREKRSEVVKLPTERWDAQLSPQLLNTVVM 239 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + ++S L + + Y F ++ Q L L++I Sbjct: 240 EPEALSISGL-WQYIHYLADQGLNNNRYWLAFWTKVLQPLVTAALVLMAISFIFGPLRSV 298 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + + F + + P + ++ C + L+ + Sbjct: 299 TLGQRIFTGVLVGFVFRIAQDLLGPSSLVFDFPPLLAVVIPASICALAGVWLLRR 353 >gi|83644756|ref|YP_433191.1| permease [Hahella chejuensis KCTC 2396] gi|83632799|gb|ABC28766.1| predicted Permease [Hahella chejuensis KCTC 2396] Length = 365 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 46/367 (12%), Positives = 125/367 (34%), Gaps = 22/367 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+ R + S L ++ I + ++ + + S ++L I GY +P Sbjct: 1 MFIILRYLSRQLLVSMLAVAGVLLLIFMSGRFIKYLADAAQGKLSADVLFAIMGYRLPGF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + M +E+ ++ G +R LIK + A+L+ + + Sbjct: 61 LELILPLGLFIGILLAYGRMYLESEMTVLFACGMNRFQLIKLTMVSALLVMLVVGAMSLY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + ++ + F L F L + ++ ++ + + + Sbjct: 121 VSPWGLRQVDEIFSDQSKITEFELLAPGRFQSLRSGERVTYTEGLSSDKREMQNVFIAER 180 Query: 181 TQTHKIYYAQSGSI-------DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 + + ++L++G ++ P D ++++ +Y ++ Sbjct: 181 DSESGSISVLAAKRGTQLVDPSTGSRFVVLHEGARYQGRPGEMDYRVIEYDAYGIKIAEP 240 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 ++ + + S L R+ R++ L I L++I Sbjct: 241 DAEAEKTRDEAKPTSELWR----------SDNPKDRALLQWRISIPLLVPIVALLAI--- 287 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ--NPYYIPILYLFLFCISSIFL 351 + ++ + + ++ I +E+ +I + ++ ++ + Sbjct: 288 PLSRVNPRQGRFFHLLPAMLIYITYLGLLIASRKSLEKERISEWIGMWWVHGTFLAIALV 347 Query: 352 LMIKKKY 358 LM + Sbjct: 348 LMFGPDW 354 >gi|163750107|ref|ZP_02157350.1| hypothetical protein KT99_20606 [Shewanella benthica KT99] gi|161330164|gb|EDQ01146.1| hypothetical protein KT99_20606 [Shewanella benthica KT99] Length = 352 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 46/356 (12%), Positives = 117/356 (32%), Gaps = 4/356 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK +LYI R + S + L + ++ +I+ + ++ +V ++ +LIP Sbjct: 1 MKILDLYIARTLVSSSALCLLILTGLSGIIKWVDQLRVVGRGNYTMLDAGIYVLFLIPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + + + +EL+++ + G SR + + A+ L + + + Sbjct: 61 IEIFFPMAVLLGALIGMGMLASGSELVVMQSAGLSRFQITLSAMKTAVPLMLMIMVLGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P +L A + ++ + D N N+ Sbjct: 121 GAPAAERRANELQAFKVSGGSLIKSSRGIWAKDGDLFVNIGEVENINSLRNITLYEFDST 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 K +A+ G D L D + ++ + + S + + Sbjct: 181 LTLVKTIHAERGVYSND--HWRLLDVRQIDLTKDKVTLTDLTLYRWDSTLTPDKLSVVSV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K ++ LL + + Y +++ Q + + L+++ Sbjct: 239 KPESLSIQGLL-GYLDYLEANNQNSGRYELALWRKIMQPVTVAVMMLVALSFVFGPLRSV 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + +F + + + P ++ + + SS+ + I+K Sbjct: 298 TMGARVLLGVIAGFTFYISSEIFGPLTLVYGLPAFLGAV-MPALIFSSVAIYFIRK 352 >gi|163756243|ref|ZP_02163358.1| hypothetical protein KAOT1_06887 [Kordia algicida OT-1] gi|161323855|gb|EDP95189.1| hypothetical protein KAOT1_06887 [Kordia algicida OT-1] Length = 359 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 47/359 (13%), Positives = 116/359 (32%), Gaps = 2/359 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI++ +F + L V I ++ I + I+ + +S + ++ + Sbjct: 1 MKILDWYIIKKYLLTFSVMLLLFVPIGIMVDISENIDKMLASKAPTDEIVLYYVNFVIYF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + + + +TE++ I ++G S + ++P L A +++I F+ Sbjct: 61 ANLLFPIFLFLSVIWFTSKLANDTEIIAILSSGVSYLRFLRPFLVAASIVAIVAFVMGMY 120 Query: 121 IEPKCRS--TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 I P + + E ++D S + + Sbjct: 121 IVPNASKGFNEFRFEYIKKGRKKVRDNLEIYKQVTENDFIYLKSFSFDSKRGDNFTLEHF 180 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 D A+S + D L + ++ + + E + + + Sbjct: 181 EDNVLEYKIQARSIKYNEDDSTYTLRGFKKRIVGAMNDSLVNQRKFDTIFPFEVDDLTPV 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 A N L + + +KR + + I +I++ + + Sbjct: 241 TYMAETLNYQELDKFIAKEKQSGSPNVNKHLLVKYKRWSLPITAFILTIIAVAVSSMKRR 300 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + I F + K +P + +F + +++LL ++ Sbjct: 301 GGMGFNLAFGIAIAFIYIFFDKIFGTMAEKSGFSPMLAVWVPNLVFGVLALYLLYNARR 359 >gi|165936803|ref|ZP_02225370.1| putative permease [Yersinia pestis biovar Orientalis str. IP275] gi|167420748|ref|ZP_02312501.1| putative permease [Yersinia pestis biovar Orientalis str. MG05-1020] gi|165915452|gb|EDR34062.1| putative permease [Yersinia pestis biovar Orientalis str. IP275] gi|166961554|gb|EDR57575.1| putative permease [Yersinia pestis biovar Orientalis str. MG05-1020] Length = 358 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 50/355 (14%), Positives = 117/355 (32%), Gaps = 3/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI R I + LM+ L +V ++ +I+ + ++ V S + IP + + Sbjct: 5 LDRYIGRTILNTILMTLLMLVSLSGIIKFVDQLRKVGQGDYSAASAGMYTILSIPKDIAV 64 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L ++ +EL+++ +G +R+ + V+ AI L + + P Sbjct: 65 FFPMAALLGALLGLGTLASRSELVVMQASGFTRMQIAASVMKTAIPLVLLTMAIGEWVAP 124 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + T + + + + L+ + D + ++ + Sbjct: 125 QGEQTARNFRTQQMYGGSLLSTQSGLWAKDGSDFIYIQRVSGESELTGVNIYHFDKEDRL 184 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + YA + + + D + L+ + +P S + S + + Sbjct: 185 LSVRYAATATYEKDNKTWRLSQVDESDLSNPTQVTGSQTLTGEWKTNLTSEKLGVVAMDP 244 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S L + + Y ++ + L+++ Sbjct: 245 DSLSISGL-HDYSKYLQQSGQESNRYELSMWSKVFAPFSVAVMMLMALSFIFGPLRSVPM 303 Query: 303 KKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 I F V F + P +L LF + SI LL+ ++ Sbjct: 304 GVRVVTGIFFGFVFYVLDQVFGRLSLVYGIPPMLGALLPSMLFLLISICLLLKRR 358 >gi|85713126|ref|ZP_01044159.1| Predicted permease [Idiomarina baltica OS145] gi|85693042|gb|EAQ31007.1| Predicted permease [Idiomarina baltica OS145] Length = 371 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 48/363 (13%), Positives = 129/363 (35%), Gaps = 21/363 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++ +S + + ++ I + ++ ++ S +I+ ++ +P +L Sbjct: 2 RIFKYLIAETLKSQIAVLVVLMTIFVSQKFVRVLSDASEGDIPSSIIFQLLSLNLPALLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + + E+ ++ G S + + L +A++L++ + Sbjct: 62 LIIPLSLFLGILLAHGRIYADNEMTVLHACGVSEWYVTRVTLVVAVILALLTAALTMYVV 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIKISKYNPNNTLQGIFIVDSRDT 181 P +++ KA+ + L F + + I I + LQ +F+ + Sbjct: 122 PWSLEQEQKIEDKARADSGLTALIPGRFQQSSNGKAVIFIQSQDDQGDLQNVFVAQHQAE 181 Query: 182 QTHKI----YYAQSGSIDLDRQ-AIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 Q + SG ++ + + L + R + + +M F+ Y LQ + Sbjct: 182 QGRIRSGSVVVSTSGEVNTESSGSQWLELRDGKRFAGDGEHYQLMSFEQYRLQIKEQPVD 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + ++ L N +E R+ L L++++A Sbjct: 242 EQLRDLEAYTVNELWQEQSNAAA----------AELQWRIAIPL---AMPLLTLIAVPLS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMI 354 + ++ K + ++ I G F + P +I + ++ + + L+ Sbjct: 289 RVNPRQGKFARMAPAILIYLGYFLVLMAAKSAVRDGVIPTFIGLWWIHVALLVFGIALLS 348 Query: 355 KKK 357 + + Sbjct: 349 RAR 351 >gi|167646492|ref|YP_001684155.1| permease YjgP/YjgQ family protein [Caulobacter sp. K31] gi|167348922|gb|ABZ71657.1| permease YjgP/YjgQ family protein [Caulobacter sp. K31] Length = 378 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 62/361 (17%), Positives = 132/361 (36%), Gaps = 7/361 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ E Y+ R + L++ L +V +A + + L +++ +S + LKI +P + Sbjct: 1 MRLIERYLFRQLLGPTLLATLALVALALLARSLSEFDVLIEQRQSAMVFLKIIALALPQL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + L ++ E+++ G SR +I P + LA+L ++ Sbjct: 61 LSVILPIALFVAALVALNRLHTEQEIVVCFAGGMSRWRVISPAMRLAVLATLISLAMSLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P I++ + L + + F L + + + + +FI + Sbjct: 121 VAPWSSRAIRETFFDMKSDLASTLVRPGEFTEPGPGLTVYAQVIDRDQIIHNVFIHQEKP 180 Query: 181 TQTHKIYYAQSGSIDLDR--QAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSS 236 Y A+SG I + +IL G S + + + + YT S + Sbjct: 181 NGAAVTYTARSGVIAERKGLPVLILRKGSNQEFS-STGVLQYLSWDEYTFDLSSLFQSDE 239 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + K D+ L P+ + + SE H RL L+ + +++ A Sbjct: 240 LLHYKIGDRYPHELFFPDLAQ-EWEQQNRVKLLSEGHWRLASPLYNMAMMSMALAAVIGG 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + R I + + + V + + N + + Y + I + Sbjct: 299 SFSRMGYG-KRIAMVGAAAAMVQIVGFGVKAACDNNVWLNGLQYAVPLAAFWWGMSQIFR 357 Query: 357 K 357 + Sbjct: 358 Q 358 >gi|85713125|ref|ZP_01044158.1| Predicted permease [Idiomarina baltica OS145] gi|85693041|gb|EAQ31006.1| Predicted permease [Idiomarina baltica OS145] Length = 355 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 46/355 (12%), Positives = 125/355 (35%), Gaps = 3/355 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI + ++ LMS + + ++ +I+ ++++ V + + Y IP + Sbjct: 3 SILDRYIGATVLKTSLMSLIVLTGLSGLIRFVEQLKSVGRGSYEVIDAALFVFYSIPRDV 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + + + N+EL+++ G S++ + V+ A+++ I + + Sbjct: 63 EVFFPMAALLGGLIGMGVLASNSELIVMQAAGRSKLNIAGAVMKTAVVMMIAVIAIGEWV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + + A+ + + ++ + DD IS+ L G+ I D Sbjct: 123 APPMEAKGRLIRAQEISGGSLISAQRGVWAKDGDDFIN-ISEVEDTGRLNGVLIYDFDGQ 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 Q + ++ + + L+ R + + + + +K Sbjct: 182 QQLETVTYAQTAVYSNE-SWRLSQVVETRLTQQKVIEKRLDSTVWQSSLTPDKLGVVTIK 240 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 ++S L++ + + Y +++ + + L+++ Sbjct: 241 PESLSISGLID-YLTYLKSNEQSAQRYELALWRKVLSPVTVAVMLLVALSFIFGPLRETS 299 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + +F V + ++ Q P + L L S +M +K Sbjct: 300 MGARILLGVITGFAFHVSNEIFGPLAQVYQVPAVLGALLPSLVFASVAIFVMQRK 354 >gi|237799873|ref|ZP_04588334.1| hypothetical protein POR16_13645 [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022728|gb|EGI02785.1| hypothetical protein POR16_13645 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 375 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 47/366 (12%), Positives = 115/366 (31%), Gaps = 29/366 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + + ++ + ++ + +S +L I G+ +P L Sbjct: 2 IVFRYLSREVLLTLSAISAVLLVFIMSGRFIKYLAQAASGALDPGVLFMIMGFRLPGFLQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + M +E+ ++ TG S+ L+ + A L+ + + + Sbjct: 62 VILPLGLFLGILMAYGRMYLESEMTVLAATGMSQQRLLAMTMGPAALVGLVVAWLSFSLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFF--RLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + L + F L F R + + L G+FI + R Sbjct: 122 PQGATQFSLLINQQDAMTEFDTLVPGRFQALRDGTRITYTKELSEDRSQLGGVFISEKRM 181 Query: 181 TQTHKIYYAQSGSIDLDRQ---------AIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 + + + +IL +G + +P + D ++K+ +Y Sbjct: 182 SSDKSKDNGITVLVAEKGHQEVQPNGSRFLILENGYRYDGNPGAADYRVVKYDTYGAALP 241 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S + S L +E R++ L I L++I Sbjct: 242 KPEISEEITDREAIPTSELF----------GSSTPRNVAELQWRISLPLSVFIVTLMAIP 291 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-----NPYYIPILYLFLFCI 346 + ++ + + ++ + + +E+ + + ++L Sbjct: 292 L---SRVNPRQGRYLKLLPAILLYMSYLAILISVRSSLEKGKLPLSLGMWWVHAIYLCIG 348 Query: 347 SSIFLL 352 +F Sbjct: 349 LVLFYW 354 >gi|206900512|ref|YP_002251020.1| permease YjgP/YjgQ, putative [Dictyoglomus thermophilum H-6-12] gi|206739615|gb|ACI18673.1| permease YjgP/YjgQ, putative [Dictyoglomus thermophilum H-6-12] Length = 356 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 60/357 (16%), Positives = 125/357 (35%), Gaps = 2/357 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y L+ F + L I V + ++LV + + L + ++ IP Sbjct: 1 MKIISKYFLQNFIPVFFVGLLLFTTILLVSPLFIIMDLVVARSIPLKVAFELFLTKIPPY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + V+ + + E++ + +G S + +L + + + +F Sbjct: 61 LTYTFPMAIFLAVVYVIGQFSEHGEIMAMKASGASIKYFLPAILVFSFSVQLIMFYVNEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + PK K L +K+ + E F ++ + + + + I Sbjct: 121 VAPKAYEREKFLLSKSYNNIAVQSRENVFFNENNNFYFFRKVDPKNKRFEEILLIELLER 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV- 239 I YA+ + D + + DGEV+ + I +FK Y + + + Sbjct: 181 GNIKLIIYAKKATWDEIKGWTFM-DGEVYSLNKEGDMIFQGRFKEYKVVLDRNPYQLVPS 239 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 K ++ F + L ++EFH R+ IF ++++ Sbjct: 240 SKPIEEMSIFEIIDQIRLLEGTGLNLNNLKTEFHIRIALPFTCPIFAILALGLGLNMGRG 299 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + IS+ + + +F + + + L +F I I+LL K+ Sbjct: 300 GRSLSFGLSVISIFVYYVLFSIGRSLAKAGIVSYFLGAWLGNIIFLIIGIYLLNKKR 356 >gi|198274616|ref|ZP_03207148.1| hypothetical protein BACPLE_00768 [Bacteroides plebeius DSM 17135] gi|198272063|gb|EDY96332.1| hypothetical protein BACPLE_00768 [Bacteroides plebeius DSM 17135] Length = 391 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 51/363 (14%), Positives = 124/363 (34%), Gaps = 7/363 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 +K + YI+ ++ + I+ IA V I + I+ ++ ++ I+ IP Sbjct: 33 LKRLDRYIIVKFLGTYFFAIALIISIAVVFDINENIDDFINNKAPISAIIFDYYLNFIPY 92 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + +TG S L+ P + A ++++ ++ Sbjct: 93 YTNLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRLMVPYMISAAIIALVTYVLST 152 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P T + + Y+ + + N T + Sbjct: 153 EVIPTGSVTRLKFEQVYKNKKRADYVRNIQLEVDTGVIAYMERYEDYNKTAYRFSLDKFE 212 Query: 180 DTQTHKIYYAQSGSIDLDR-QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 D + A+ + D I+ D + + + I+ + E + Sbjct: 213 DHKLVSHLTARRITYDTTTVHRWIIKDYMIREMKGMRETITRGGRMDSIINMEPQDFLIT 272 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + L ++ + E+++R+ I +I + + Sbjct: 273 RGQQETMTSPQLREYIDKQKQRGFANIKVFEVEYYRRIATSFAAFILTVIGLSL---SSQ 329 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL-LMIKKK 357 R+ + I + +SF + F I N P L +++ I +F+ + + +K Sbjct: 330 KRKGGMGLHLGIGIGLSFS-YILFQTISSTFAINGNAHPNLAVWIPNILYLFIAIYLYRK 388 Query: 358 YTK 360 K Sbjct: 389 APK 391 >gi|91792232|ref|YP_561883.1| permease YjgP/YjgQ [Shewanella denitrificans OS217] gi|91714234|gb|ABE54160.1| permease YjgP/YjgQ [Shewanella denitrificans OS217] Length = 370 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 55/365 (15%), Positives = 129/365 (35%), Gaps = 23/365 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++ + ++ L ++ I Q ++ + S+ +++L + G +P + Sbjct: 2 IVFRYLIAEVLKAQFAVLLVLLTIFISQQFVRVLADASNGEFPASLVLTLLGLNLPQLTL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + M E++++ + G S + + L +A+ +F + + Sbjct: 62 LILPLSFFLGILLAHGRMYAENEMVVLHSVGVSEWYVARVTLLIALANLVFTCVLSMYVS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-----D 177 P Q+ KAQ + L + F + + + + V Sbjct: 122 PWAEERQNQVLEKAQSEAGLAALVQGRFQASPNGRAVLFVEKISKDNQLSKVFVAQLPDP 181 Query: 178 SRDTQTHKIYYAQSGSIDLD---RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + AQ G + D Q + L G ++ SP +++F Y ++ + Sbjct: 182 DDKEGMSNVVVAQQGRVIEDSIGSQQLQLERGVRYQGSPQGLAYQVIEFGGYRMEIKEQE 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 K + ++ L +EFH R L + LI++ A Sbjct: 242 VDERRRKLSALSMEQL----------NDTQGPEAAAEFHWRFAIPLSIPLLTLIAVPLA- 290 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ--NPYYIPILYLFLFCISSIFLL 352 + ++ K +F ++ + G F +E P Y+ + ++ + + L Sbjct: 291 --RVNVRQGKFAKMFPAILLYLGYFGLMIAGRKALEDEVIPEYLGMWWIHISVLLMGVFL 348 Query: 353 MIKKK 357 + K++ Sbjct: 349 LGKER 353 >gi|327396303|dbj|BAK13725.1| inner membrane protein YjgQ [Pantoea ananatis AJ13355] Length = 358 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 47/357 (13%), Positives = 117/357 (32%), Gaps = 3/357 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + YI + I + LM+ +V ++ +I+ + ++ S + +P + Sbjct: 3 RVLDRYIGKTIFNTILMTLFMLVSLSGIIKFVDQLRKTGQGAYSALDAGYYTLLSVPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ + +EL+++ G +R+ + V+ AI L + + Sbjct: 63 EIFFPMAALLGALLGLGTLAQRSELVVMQAAGFTRMQVALSVMKTAIPLVLLTMAIGEFV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + A+ + L+ + ++ + + D Sbjct: 123 APQGEQMARNFRAQQLYGGALVSTQSGLWAKDGNNFIYIERVKGDDEIDGVSIYNFTDDR 182 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVL 240 + + YA + + D++ +L+ + P S + + L Sbjct: 183 RLQSVRYAATAKWNKDKKLWVLSQVDESNLTDPKQITGSQSLTGEWKTSLTPDKLGVVAL 242 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + +++ L + + YR ++ Q L + L+++ Sbjct: 243 DPDALSITGLYD-YSKYLKQSGQESGRYRLNMWSKIFQPLSVAVMMLMALSFIFGPLRSV 301 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P + L F +I L M+ K+ Sbjct: 302 SMGVRVVTGISFGFLFYVLDQIFGPLSLVYGLPPIFGAI-LPSFAFFAISLFMLIKR 357 >gi|262367136|gb|ACY63693.1| membrane protein [Yersinia pestis D182038] Length = 358 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 49/355 (13%), Positives = 116/355 (32%), Gaps = 3/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI R I + LM+ L +V ++ +I+ + ++ V S + IP + + Sbjct: 5 LDRYIGRTILNTILMTLLMLVSLSGIIKFVDQLRKVGQGDYSAASAGMYTILSIPKDIAV 64 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L ++ +EL+++ +G +R+ + V+ AI L + + P Sbjct: 65 FFPMAALLGALLGLGTLASRSELVVMQASGFTRMQIAASVMKTAIPLVLLTMAIGEWVAP 124 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + T + + + + L+ + D + ++ + Sbjct: 125 QGEQTARNFRTQQMYGGSLLSTQSGLWAKDGSDFIYIQRVSGESELTGVNIYHFDKEDRL 184 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + YA + + + D + L+ + +P S + + + Sbjct: 185 LSVRYAATATYEKDNKTWRLSQVDESDLSNPTQVTGSQTLTGEWKTNLTPEKLGVVAMDP 244 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S L + + Y ++ + L+++ Sbjct: 245 DSLSISGL-HDYSKYLQQSGQESNRYELSMWSKVFAPFSVAVMMLMALSFIFGPLRSVPM 303 Query: 303 KKIHPIFISLSISFGVFW-GFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 I F V F + P +L LF + SI LL+ ++ Sbjct: 304 GVRVVTGIFFGFVFYVLDHVFGRLSLVYGIPPMLGALLPSMLFLLISICLLLKRR 358 >gi|330873093|gb|EGH07242.1| hypothetical protein PSYMP_02386 [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330963183|gb|EGH63443.1| hypothetical protein PSYAC_00745 [Pseudomonas syringae pv. actinidiae str. M302091] Length = 353 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 45/355 (12%), Positives = 107/355 (30%), Gaps = 4/355 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + + L I+ + + + + + + T +L L P Sbjct: 1 MVKLDRYIGKSVFLAILAVLGIILGLVSLFAFIDEMGDI-NDTYTLLDALSYVMMTAPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ ++EL I+ G S ++ V+ +LL + + Sbjct: 60 VYDTLPMAALIGCLIGLGTLASSSELTIMRAAGVSIGRIVWAVMKPMLLLMVAGVLVGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + AQ + L+ R D+ + L Sbjct: 120 VAPYAENQAQAARSLAQGSGDAQSARHGLWHRQGDEFIHINTVQPNGLMLGVTRYRFDDQ 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 +A+ D L D ++ + + + ST+++ Sbjct: 180 RHMLTSSFAKEAHFKTD--YWELKDVSTTHFKEGRTEVVNAPDERWDVSLSPQLLSTVIM 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 ++S L + + Y F ++ Q V L++I Sbjct: 238 PPESLSISGL-WSYAHYLADQGLSNGRYWLAFWTKVLQPAVTVALVLMAISFIFGPLRSV 296 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + + +F + + P + +L C + L+ + Sbjct: 297 TLGQRVFTGVVVGFTFRIIQDLLGPSSLLFGFPPLLAVLIPAAACAFAGLYLLRR 351 >gi|22299113|ref|NP_682360.1| hypothetical protein tll1570 [Thermosynechococcus elongatus BP-1] gi|22295295|dbj|BAC09122.1| tll1570 [Thermosynechococcus elongatus BP-1] Length = 378 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 59/367 (16%), Positives = 141/367 (38%), Gaps = 16/367 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y+L + F++ +A V I + ++ + L ILL++ GY +P VL Sbjct: 15 KLDQYLLSLLLPGFVLGLTVFTTLALTVGTIFDLVRQIADAQLPLTILLQLIGYQLPAVL 74 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 +V P + ++ ++ E + + + G ++ PV+ A+L+S Sbjct: 75 VLVFPMAVLLAVVGAMSRLSEEGEWIALRSVGICLGRVLIPVVVFALLVSGLTLALNETA 134 Query: 122 EPKCRST----IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD 177 P + + +L + + + + + + R + + + +QGI ++D Sbjct: 135 VPIAKYESKKLMGELLQQERSLGSGTDIFYPEYDRHGNVRRLYYGHRFDGSRIQGITVLD 194 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 Q ++ A+S ++ +L+ G + S ++++F ++ S Sbjct: 195 FSQPQVTQVISAESAEWNVRESRWLLSQGIAYLISHTGVSRNLLQFDQQEIRLPRPAQSQ 254 Query: 238 --IVLKANDQNLSFLLNPNPN-NPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 N+ +++ +P+ PEL+ + + Q V+F L+ + Sbjct: 255 PLRPTDVNELSITQARRALQRLDPDREPELVRALKVHLAQSYAQPFLAVVFALLGVGFGL 314 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF----CISSIF 350 + R R IS+++ FG + ++ + + P+ +L + +I Sbjct: 315 SPSQRRGR---QGFGISVAVVFG-QYVLTFFLGALGTTGTLSPLAAAWLPHSIGLVVAIA 370 Query: 351 LLMIKKK 357 LL + Sbjct: 371 LLWRADR 377 >gi|170725440|ref|YP_001759466.1| permease YjgP/YjgQ family protein [Shewanella woodyi ATCC 51908] gi|169810787|gb|ACA85371.1| permease YjgP/YjgQ family protein [Shewanella woodyi ATCC 51908] Length = 352 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 45/355 (12%), Positives = 114/355 (32%), Gaps = 3/355 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + YI R + + + L + ++ +I+ + ++ +V + ++ +LIP Sbjct: 1 MRILDFYIARTLVSTSALCLLILTGLSGIIKWVDQLRVVGRGSYTMLDAGIYVLFLIPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + + N+EL+++ + G SR+ + + A+ L + + Sbjct: 61 IEMFFPMAVLLGALIGMGMLASNSELVVMQSAGLSRLQITLSAMKTAVPLMLIIMALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P +L A + ++ + D + NN + D Sbjct: 121 GAPAAEQKAYELQATKISGGSLIKSSRGIWAKDGDLFVNIGEVEDINNLRNITLYKFNSD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + +A+ G D L D + ++ + + S + + Sbjct: 181 LALTRTIHAERGVFSKD--HWRLLDVRQTDLTDERVTLTDLTLYRWESTLTPDKLSVVSV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K ++ L+ + + Y ++ Q + + L+++ Sbjct: 239 KPESLSIQGLI-GYLDYLEVNNQDASRYELALWRKFMQPVTVAVMMLVALSFVFGPLRTV 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + SF + + + P YI + L + K Sbjct: 298 TMGARVLLGVIAGFSFYISSEIFGPLTLVYGLPAYIGAMMPALIFGVGAIYFIRK 352 >gi|148546263|ref|YP_001266365.1| permease YjgP/YjgQ family protein [Pseudomonas putida F1] gi|148510321|gb|ABQ77181.1| permease YjgP/YjgQ family protein [Pseudomonas putida F1] Length = 353 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 42/357 (11%), Positives = 115/357 (32%), Gaps = 6/357 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + + L I+ +A + + + + S T ++ P Sbjct: 1 MAKLDRYIGQSVLLAILAVLGIILGLASLFAFIDEMGDL-SDTYTVLEAGNFVLLTAPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L S+ ++EL I+ G S ++ V+ ++L + + Sbjct: 60 LYEMLPMAALIGCLIGLGSLASSSELTIMRAAGVSIGRIVWAVMKPMLVLMLVGLLIGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + AQ + ++ R ++ + L + Sbjct: 120 VAPVTENKAQADRSLAQGGGEAQSSKRGMWHRQGEEYVHINAVQPDGLLLGVTRYRFDSE 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + +A+ D +L D ++ + + + +T++L Sbjct: 180 RKIVTSSFARRAQYQND--HWLLADVRTTYFRGDHTEVVNAPEERWDVSLTPELLNTVIL 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 +++ L + + + Y F ++ Q + L++I R Sbjct: 238 APESLSITGL-WDYIHYLSDQGLNNSRYWLAFWTKVLQPMVTAALVLMAISFIFGPL--R 294 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 +F + + F G + + + + + I ++ + + ++ Sbjct: 295 SVTLGQRVFTGVLVGFVFRIGQDLLGPSSQVFGFPPLLAVVIPAGICALAGVWLLRR 351 >gi|42524172|ref|NP_969552.1| hypothetical protein Bd2760 [Bdellovibrio bacteriovorus HD100] gi|39576380|emb|CAE80545.1| conserved hypothetical protein [Bdellovibrio bacteriovorus HD100] Length = 359 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 49/361 (13%), Positives = 121/361 (33%), Gaps = 10/361 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y F+ L + + + + +V+ + + L+ Y P + Sbjct: 1 MNRIDRYTAWLFVGYFVGGLLVFLTLFTAVDAMS--TMVNYKDVAPSALVNYYLYSFPGI 58 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + LTS+N+ EL+ + +G S I + P+L L ++S +++ + Sbjct: 59 ISQLLPVACLLGVILTLTSLNKANELVALFASGMSLIRIAVPMLLLVAVISALGYMAADR 118 Query: 121 --IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 + + FS + + + + I N + Sbjct: 119 VLPRATKQKNYILYYDLKKEPHRFSTIRTDRIWYRSKNSIFNIKTLNAKGDGAQGLTMYF 178 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS-T 237 + + + + + +L G V + S FK+ ++ + Sbjct: 179 FSDEWDLVQMITAAQVKIQGAQWLLEQGTVTIFNKDSSFPLTSPFKTKSIVMAEDSKDLQ 238 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + D L + Y ++H +++ ++ L+ I + RA Sbjct: 239 SAGQTADMMSQKELEHFIDKNKAAGLDTVAYEVDYHSKISFAFAGLVMCLLGIPFSVGRA 298 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF--LFCISSIFLLMIK 355 R + + I L++ F ++ F + Q+ P+ + + + +++K Sbjct: 299 --RSGGTMLNVGICLALVFA-YYVFYSSGITLGQHGTLPPVAAAWAPNIVMLGVAFVLLK 355 Query: 356 K 356 K Sbjct: 356 K 356 >gi|107103347|ref|ZP_01367265.1| hypothetical protein PaerPA_01004416 [Pseudomonas aeruginosa PACS2] Length = 355 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 44/355 (12%), Positives = 109/355 (30%), Gaps = 2/355 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + L I+ +A + + +N +S+S + L+ P Sbjct: 1 MVKLDRYIGVTVFVAILAVLGVILGLALLFAFIDELNDISAS-YGIGDALRFIFLTAPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ N+EL I+ G S ++ V+ ++L + + Sbjct: 60 AYDMLPMAALIGCLVGLGTLASNSELTIMRAAGVSLSRIVWAVMKPMLVLMLAGILVGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A AQ + L+ R + + Sbjct: 120 VAPWTENIAQSGRALAQGGGDSQSSKRGLWHRQGREYIHINAVQPNGVLYGVTRYRFDEQ 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 +A+ + D + + ++ + + + Q +T+V+ Sbjct: 180 RGLESASFAKRARFETDHWQLEEVTTTLLHPREKRSEVIKLPTERWDAQLSPQLLNTVVM 239 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + ++S L + + Y F ++ Q L L++I Sbjct: 240 EPEALSISGL-WQYIHYLADQGLNNNRYWLAFWTKVLQPLVTAALVLMAISFIFGPLRSV 298 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + + F + + P + ++ C + L+ + Sbjct: 299 TLGQRIFTGVLVGFVFRIAQDLLGPSSLVFDFPPLLAVVIPASICALAGVWLLRR 353 >gi|257462589|ref|ZP_05626999.1| hypothetical protein FuD12_01974 [Fusobacterium sp. D12] gi|317060240|ref|ZP_07924725.1| conserved hypothetical protein [Fusobacterium sp. D12] gi|313685916|gb|EFS22751.1| conserved hypothetical protein [Fusobacterium sp. D12] Length = 361 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 49/363 (13%), Positives = 118/363 (32%), Gaps = 12/363 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK ++YI + + F S + I + QI + + V+ S + G L+P + Sbjct: 1 MKKLDIYITKNFLKYFSYSLFSFLAIFVLSQIFKVLRYVNEGQLSAGEVPLFIGNLLPGI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + + M N E++ + +G L++ + ++ +S+ +F + Sbjct: 61 IINVAPLAVLLGGLISINIMASNLEIISLKTSGIRFARLVRGPILVSFFISLVVFYLNDR 120 Query: 121 IEPKC---RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIK--ISKYNPNNTLQGIFI 175 + P ++ + L +Y I++ I Sbjct: 121 VYPGSVVRNRELRGKEDVEERELPKEKENAFFRNEEGRYVYYMKKINREKGIMDYVEILD 180 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + + +I A+ G D +++ I + ++ + + Sbjct: 181 MSEDFDKIERIITAKQGKYDFEKKIWIFKEVNLYYPETDRTESRVWIQDEKYRDEPDRFI 240 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 S + Q ++ L + + SE KR + + + + Sbjct: 241 SLSNIVPKQQTIAEL-KKAIKEGSATGNEIREILSELGKRYSFPFASFVVSFLGLAL--- 296 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLM 353 + + I I IS+ + + + + N Y P L ++ + L Sbjct: 297 GSHYVRGMSILNIVISILLGYAYYLV-EGAFEALGMNGYLNPFLSGWIPNLLFLAAGLYF 355 Query: 354 IKK 356 +++ Sbjct: 356 MRR 358 >gi|118581151|ref|YP_902401.1| permease YjgP/YjgQ family protein [Pelobacter propionicus DSM 2379] gi|118503861|gb|ABL00344.1| permease YjgP/YjgQ family protein [Pelobacter propionicus DSM 2379] Length = 354 Score = 113 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 43/355 (12%), Positives = 103/355 (29%), Gaps = 3/355 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y+ R +L L + + ++ ++++ + ++ L +P Sbjct: 1 MKIIDRYLGRSFASCWLSVNLILAGLLSFFELAKQLDDIGKGRYDVSDALLYVSLTLPGR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + + L + +N EL + G S + + A+L + L + Sbjct: 61 MLEMAPPSALLGSIIALGLLAKNQELTALRAGGISVQRIGWTFMKPAVLTLLVLLLGAQF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P T A + R + + + I + + Sbjct: 121 IIPTLEQTAWTRRETALSKSGTLLPRGGFWTRDERRFINLRTARDNGVQAVD--IYEFDN 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 Y + L+ + + + ++ + L Sbjct: 179 RDALTGYIHGRETRIGANGNWELHHVLRKEITEQGDSVRALPRLVLPHLLTPQQTAALTL 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 ++S L + +N R + Y ++LT + ++S+ + A Sbjct: 239 PPQTLSISEL-SGTISNLQKREQNAGRYLLALWQKLTLPVITAAMIMLSLPLVCRPARSA 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 I + F I Q + L+ L ++ +L + Sbjct: 298 SLGWHIMIGAIFGVVFFYLNQILGYTGLILQVSPFWTTLFPALAVLAGGAILTRR 352 >gi|330504704|ref|YP_004381573.1| permease YjgP/YjgQ family protein [Pseudomonas mendocina NK-01] gi|328918990|gb|AEB59821.1| permease YjgP/YjgQ family protein [Pseudomonas mendocina NK-01] Length = 354 Score = 113 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 41/357 (11%), Positives = 113/357 (31%), Gaps = 5/357 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + L I+ +A + + + ++ L L P Sbjct: 1 MAKLDRYIGTQVFFAILAVLGIILGLALLFAFIDELGDLNKGDYGLGQALWYVLLTAPRR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ N+EL I+ G S ++ V+ ++L + + Sbjct: 61 AYEMLPMAALIGCLIGLGTLASNSELTIMRAAGVSIGRIVWAVMKPMLVLMLAGILIGEY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A AQ + ++ R + + L + Sbjct: 121 VAPLTENQAQADRALAQGGGAAQSSKRGMWHRQGQEYVHINAVQPGGVLLGVTRYRFDDE 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + +A+ + +L++ + ++ + + + ++ T+V+ Sbjct: 181 RRLLSASFARRAEYRDN--HWMLSNVKTTLLHEDHSEVVNQREERWDIELNPELLGTVVM 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + +++ L + + + Y F ++ Q L L++I R Sbjct: 239 EPEALSVTGL-WQYIHYLSEQGLNNARYWLAFWTKVLQPLVTGALVLMAISFIFGPL--R 295 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 +F + + F + + + L I ++ + + ++ Sbjct: 296 SVTLGQRVFTGVLVGFIFRIAQDLLGPSSLVFGFSPLLAVLVPAGICALAGVWLLRR 352 >gi|218710647|ref|YP_002418268.1| hypothetical protein VS_2727 [Vibrio splendidus LGP32] gi|218323666|emb|CAV19977.1| hypothetical permease [Vibrio splendidus LGP32] Length = 356 Score = 113 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 51/355 (14%), Positives = 123/355 (34%), Gaps = 2/355 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +LYI R I + + + V ++ +I+ ++++ V T L L IP + Sbjct: 3 KILDLYIGRTIIATTSLVLVTFVGLSGIIKYVEQLRKVGRGTYDLLQALYFVLLSIPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++ + VL AI L + + + Sbjct: 63 EMFFPMAALLGALIGLGMLAASSELVVMQAAGFSKLDIGLSVLKTAIPLMVIVTLLGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + + +A ++ + D + +I I K + + + Sbjct: 123 APQAQ-KMARDLRTISVAGGSIISTQSGVWARDANDFIFIVKIDDDKLYGLNMWRYDENK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 Y++ D + + ++ I + S+ + + +K Sbjct: 182 ALKTAIYSKEVDYVGDNVWTMRDVEVTSFENEIQVTKESLPTFSWETSLAPDKLAIVTVK 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + +LS L + + + Y +++TQ + + L+++ Sbjct: 242 PEELSLSGLYD-YVSYLKASEQDAARYELALWRKITQPISIAVMMLMALSFIFGPLRSVT 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + +F + F I + Q P + + +L+ +K Sbjct: 301 MGARILSGVIAGFTFYISSEFFGPISLVYQIPPAFGAIAPSVVFFGIAIMLLRRK 355 >gi|301059203|ref|ZP_07200141.1| permease, YjgP/YjgQ family [delta proteobacterium NaphS2] gi|300446693|gb|EFK10520.1| permease, YjgP/YjgQ family [delta proteobacterium NaphS2] Length = 358 Score = 113 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 45/354 (12%), Positives = 112/354 (31%), Gaps = 9/354 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+L+ + ++ L + + +I I+ + ++++ + IP + Sbjct: 1 MNVLTRYLLKEFFKLLIVCQLVFIALYLMIDFASGIDDFIKAGAPKSVMIAYFAFKIPAI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + M RN E++ + +G + + +P++ LA LS+ LF Sbjct: 61 AGQMLPPAVLTTVIILFSLMKRNNEVVALKASGVNTWQVAQPLVLLAAFLSVVLFFFSET 120 Query: 121 IEPKCRSTIKQLSA-KAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 I P S ++ + + + +N + + I +++ + Sbjct: 121 IVPYASSRCNEIWRIEVKKEHPGRFHGQNHVWYKGKNCIYFIKQFDSRKMMMVDPTFYFF 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-DISIMKFKSYTLQTESANSSTI 238 D + + +G V + D+ L + Sbjct: 181 DDKFKIARRIDGRRAIWKENGWQVQNGIVQNREKDGGYDLQKFDHLEVKLDENPKDFIRE 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 ++ + L Y E + ++ +I L+ I A Sbjct: 241 NVEPEEMGYRQLKR-FAQRLKLEGYDANRYFVELNIKIAFPFIVLIMTLMGIPIALW--- 296 Query: 299 VRQRKKIHPIFISLSISF-GVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 ++ P+ +S+ I+ V+ + + P+ +L +F Sbjct: 297 --KKGMGTPVAVSIGIALCFVYLLILGLARTLGFAGILPPLFSAWLANSIFLFF 348 >gi|84387841|ref|ZP_00990856.1| hypothetical protein V12B01_07608 [Vibrio splendidus 12B01] gi|84377356|gb|EAP94224.1| hypothetical protein V12B01_07608 [Vibrio splendidus 12B01] Length = 356 Score = 113 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 50/355 (14%), Positives = 123/355 (34%), Gaps = 2/355 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +LYI R I + + + V ++ +I+ ++++ V T L L +P + Sbjct: 3 KILDLYIGRTIIATTSLVLVTFVGLSGIIKYVEQLRKVGRGTYDLLQALYFVLLSVPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++ + VL AI L I + + Sbjct: 63 EMFFPMAALLGALIGLGMLAASSELVVMQAAGFSKLDIGLSVLKTAIPLMIVVTLLGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + + +A ++ + D + +I + K + + Sbjct: 123 APQAQ-KMARDLRTISIAGGNIISTQSGVWARDANDFIFVVKIDDEKLYGLNMWRFDENK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 Y++ D + + ++ I + S+ + + +K Sbjct: 182 ALKTAIYSEEVDYVGDNVWTMNDVEITSFENEIQITKESLPTYSWKTSLAPDKLAIVTVK 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + +LS L + + + Y +++TQ + + L+++ Sbjct: 242 PEELSLSGLYD-YVSYLKASEQDASRYELALWRKITQPISIAVMMLMALSFIFGPLRSVT 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + +F + F + + Q P L + + +L+ +K Sbjct: 301 MGARILSGVIAGFTFYISSEFFGPVSLVYQIPPAFGALAPSVVFLGIAIMLLRRK 355 >gi|262038173|ref|ZP_06011570.1| permease, YjgP/YjgQ family [Leptotrichia goodfellowii F0264] gi|261747821|gb|EEY35263.1| permease, YjgP/YjgQ family [Leptotrichia goodfellowii F0264] Length = 366 Score = 113 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 59/368 (16%), Positives = 126/368 (34%), Gaps = 11/368 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI + + FI + +++ + + +S ++ Y++P + Sbjct: 1 MKIIDKYIYNSLILPSVFGISIFTFILMLNVLIEAMERLFASDLPFLSVVDYFFYVVPGI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + V ++ E++ ++ +G S +I+P ++L+ E Sbjct: 61 LVQTIPMGAFLGVMLVYGGLSETNEIIAMEGSGISLFRIIRPAFIFGLILTFIGLGLEIY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF-FRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P+ I + + S EE +F + I K + F++ ++ Sbjct: 121 VNPRALENINKQTKMLLATRPNSLTEEKIFLTNPEKGFGFYIDKVDNKKATASQFLLLNK 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES----ANS 235 + S D I+L+D + + ++K + + Sbjct: 181 QGNNPYPVIFLAKSARFDPGVIVLSDVKGYSFDKEGNSQVAAEYKEQNVPVSTFFTSEEG 240 Query: 236 STIVLKANDQNLSFLLNPNPNNPN--YRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 K ++ NL L NN E E ++R+ L V + + Sbjct: 241 EQRQKKRSEMNLKELREFYNNNIGNPEMKEAALKALIESYQRVIGPLASVFLCWLGV--- 297 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYI-IHKIEQNPYYIPILYLFLFCISSIFLL 352 R+ K ISL + FG +Y I ++ N +++ F + + + Sbjct: 298 LLSVGNRRSGKGISFGISLIVIFGYIAIVNYAKIMILKNNVPVSIAMWIPNFILFLLCVY 357 Query: 353 MIKKKYTK 360 KKY + Sbjct: 358 FSIKKYRR 365 >gi|257452882|ref|ZP_05618181.1| hypothetical protein F3_07434 [Fusobacterium sp. 3_1_5R] Length = 361 Score = 113 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 52/363 (14%), Positives = 122/363 (33%), Gaps = 12/363 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK ++Y+ + + F S + I + Q+ + + V+ S + G L+P + Sbjct: 1 MKKLDIYMTKNFLKYFSYSLFSFLGIFVLSQVFKVLRYVNEGQLSPGQIPLFIGNLLPGI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + + M N E++ + +G L++ +F++ L+S+ +F + Sbjct: 61 IINVAPLAVLLGGLISINIMASNLEIISLKTSGIRFARLVRGPIFMSFLISLIVFYLNDR 120 Query: 121 -IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV--- 176 + + +EN FFR + Y+ K T + Sbjct: 121 VYPGSVVRNRELRGKEDVEEREVPKEKENAFFRNVEGRYVYYMKKINRETGIMDHVEVLD 180 Query: 177 -DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + ++ A+ G D R+ + D ++ + + + + Sbjct: 181 MSENFDKIERMITAKKGRYDFKRKLWVFEDAHIYYPDTDTVEARAFIQEQKYMDEPEYFI 240 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 S + Q ++ L + + SE KR + + + + Sbjct: 241 SLSNIVPKQQTIAEL-KKAIKEGSATGNEIREILSELGKRYSFPFASFVVSFLGLAL--- 296 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLM 353 + + I I IS+ + + + + N Y P L ++ + L Sbjct: 297 GSHYVRGMSILNIVISILLGYAYYLV-EGAFEALGMNGYLNPFLSGWIPNLLFLAAGLYF 355 Query: 354 IKK 356 +++ Sbjct: 356 MRR 358 >gi|71738034|ref|YP_273425.1| hypothetical protein PSPPH_1158 [Pseudomonas syringae pv. phaseolicola 1448A] gi|257487386|ref|ZP_05641427.1| hypothetical protein PsyrptA_29203 [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289623815|ref|ZP_06456769.1| hypothetical protein PsyrpaN_01510 [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289649166|ref|ZP_06480509.1| hypothetical protein Psyrpa2_15674 [Pseudomonas syringae pv. aesculi str. 2250] gi|298485819|ref|ZP_07003897.1| Putative membrane protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71558587|gb|AAZ37798.1| membrane protein, putative [Pseudomonas syringae pv. phaseolicola 1448A] gi|298159643|gb|EFI00686.1| Putative membrane protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320322888|gb|EFW78979.1| hypothetical protein PsgB076_20537 [Pseudomonas syringae pv. glycinea str. B076] gi|320329803|gb|EFW85791.1| hypothetical protein PsgRace4_11121 [Pseudomonas syringae pv. glycinea str. race 4] gi|330867846|gb|EGH02555.1| hypothetical protein PSYAE_11461 [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330989713|gb|EGH87816.1| hypothetical protein PLA107_32136 [Pseudomonas syringae pv. lachrymans str. M301315] gi|331009018|gb|EGH89074.1| hypothetical protein PSYTB_04815 [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 375 Score = 113 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 48/366 (13%), Positives = 117/366 (31%), Gaps = 26/366 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + + ++ + ++ + +S +L I G+ +P L Sbjct: 2 IVFRYLSREVLLTLSAVSAVLLVFIMSGRFIKYLAQAASGALDPGVLFLIMGFRLPGFLQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ TG S+ L+ + A L+ + + + Sbjct: 62 VILPLGLFLGILMAYGRLYLESEMTVLAATGMSQQRLLAITMGPATLVGLLVAWLSFSLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFF--RLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + L K F L F R + + L G+FI + R Sbjct: 122 PQGATQFSLLINKQDAMTEFDTLVPGRFQALRDGTRITYTKELSEDRSQLAGVFISEKRM 181 Query: 181 TQTHKIYYAQSGSIDLDRQ---------AIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 + + + +IL +G + +P + D ++K+ +Y Sbjct: 182 SGDKSKDNGITVLVAEKGHQEVRPNGSRFLILENGYRYDGNPGAADYRVIKYDTYGAMLP 241 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S + S L+ +E R++ L I L++I Sbjct: 242 KPEISEEITDREAIPTSELI----------GNPAPRSVAELQWRISLPLSVFIVTLMAIP 291 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSI 349 + ++ + + ++ + + + + P + + ++ +S Sbjct: 292 L---SRVNPRQGRYLKLLPAILLYMSYLAILISVRSSLEKGKLPLSLGMWWVHGIYLSIG 348 Query: 350 FLLMIK 355 LL Sbjct: 349 LLLFYW 354 >gi|26987719|ref|NP_743144.1| permease YjgP/YjgQ family protein [Pseudomonas putida KT2440] gi|24982407|gb|AAN66608.1|AE016288_7 conserved hypothetical protein [Pseudomonas putida KT2440] gi|313497349|gb|ADR58715.1| Permease YjgP/YjgQ family protein [Pseudomonas putida BIRD-1] Length = 353 Score = 113 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 42/357 (11%), Positives = 115/357 (32%), Gaps = 6/357 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + + L I+ +A + + + + S T ++ P Sbjct: 1 MAKLDRYIGQSVLLAILAVLGIILGLASLFAFIDEMGDL-SDTYTVMEAGNFVLLTAPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L S+ ++EL I+ G S ++ V+ ++L + + Sbjct: 60 LYEMLPMAALIGCLIGLGSLASSSELTIMRAAGVSIGRIVWAVMKPMLVLMLVGLLIGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + AQ + ++ R ++ + L + Sbjct: 120 VAPVTENKAQADRSLAQGGGEAQSSKRGMWHRQGEEYVHINAVQPDGLLLGVTRYRFDSE 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + +A+ D +L D ++ + + + +T++L Sbjct: 180 RKIVTSSFARRAQYQND--HWLLADVRTTYFRGDHTEVVNAPEERWDVSLTPELLNTVIL 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 +++ L + + + Y F ++ Q + L++I R Sbjct: 238 APESLSITGL-WDYIHYLSDQGLNNSRYWLAFWTKVLQPMVTAALVLMAISFIFGPL--R 294 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 +F + + F G + + + + + I ++ + + ++ Sbjct: 295 SVTLGQRVFTGVLVGFVFRIGQDLLGPSSQVFGFPPLLAVVIPAGICALAGVWLLRR 351 >gi|254242518|ref|ZP_04935840.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|126195896|gb|EAZ59959.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] Length = 355 Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats. Identities = 44/355 (12%), Positives = 109/355 (30%), Gaps = 2/355 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + L I+ +A + + +N +S+S + L+ P Sbjct: 1 MIKLDRYIGVTVFVAILAVLGVILGLALLFAFIDELNDISAS-YGIGDALRFIFLTAPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ N+EL I+ G S ++ V+ ++L + + Sbjct: 60 AYDMLPMAALIGCLVGLGTLASNSELTIMRAAGVSLSRIVWAVMKPMLVLMLAGILVGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A AQ + L+ R + + Sbjct: 120 VAPWTENIAQSGRALAQGGGDSQSSKRGLWHRQGREYIHINAVQPNGVLYGVTRYRFDEQ 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 +A+ + D + + ++ + + + Q +T+V+ Sbjct: 180 RGLESASFAKRARFETDHWQLEEVTTTLLHPREKRSEVVKLPTERWDAQLSPQLLNTVVM 239 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + ++S L + + Y F ++ Q L L++I Sbjct: 240 EPEALSISGL-WQYIHYLADQGLNNNRYWLAFWTKVLQPLVTAALVLMAISFIFGPLRSV 298 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + + F + + P + ++ C + L+ + Sbjct: 299 TLGQRIFTGVLVGFVFRIAQDLLGPSSLVFDFPPLLAVVIPASICALAGVWLLRR 353 >gi|54307699|ref|YP_128719.1| putative permease [Photobacterium profundum SS9] gi|46912122|emb|CAG18917.1| putative permease [Photobacterium profundum SS9] Length = 356 Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats. Identities = 50/355 (14%), Positives = 126/355 (35%), Gaps = 2/355 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I + ++ +V ++ +I+ ++++ + T L L +P + Sbjct: 3 KILDWYIGRTIIATTALTLSTLVGLSAIIKYVEQLRKIGDGTYDLWKALIYVLLSMPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++ + VL A+ L + + + Sbjct: 63 EMFFPMAVLLGALIGLGMLASSSELVVMQAAGFSKLDIGLSVLKTAVPLMLIVMVLGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + + ++ + D + +I I + + +TL + I D Sbjct: 123 APQAQ-KSARELRAIWTSGGNILSVQSGVWAKDGNDFIYIGRVHEQSTLNAVNIWQFDDK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 T + ++Q +L D V S I + + + + +++K Sbjct: 182 NTLSKMVFAKSASFTEQQGWLLADVTVTNISKIQQTNTKFDTLPWKTSLSPDKLAIVMVK 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + LS + + + + Y F ++L Q + + L+++ Sbjct: 242 PEELALSGVYD-YVSYLKESKQDASRYELAFWRKLLQPISIAVMMLLALSFVFGPLRSVT 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + +F + + + + I L + + L+ +K Sbjct: 301 MGARVLSGVIFGFTFYISNEVFGPMSLVYRLHPAIGALGPSIVFLFITIYLLRRK 355 >gi|237736826|ref|ZP_04567307.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817] gi|229420688|gb|EEO35735.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817] Length = 358 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 52/359 (14%), Positives = 120/359 (33%), Gaps = 7/359 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL I + FI + I+ + + S+ +++I + +P + Sbjct: 1 MKLIDKYILNEIKIPVIFGVSLFTFIFLIDIIVAMMENIIVKGISIIDVMRILSFYLPPI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + + R +E + G S ++KP+ A +++F+F + Sbjct: 61 LSQTIPMGMFLGIMLTFSKFTRTSEATAMSAVGMSLRDIVKPIFVAACCVTLFIFFLQES 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P+ + ++ L+AK L+E F D+ + I + ++ + Sbjct: 121 IIPRSVAKLQFLTAKIAYENPVFQLKEKTFIDEVDEYNLYIDRMEGKEKKAKGILIFQKA 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSSTI 238 A++L + + + + K++ +F + + + Sbjct: 181 EDKPFPTVIVGEEAYWKDSAMVLINSKFYNFNDKGKEVLRGEFDEKRIPLAAYFSEIEVK 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 V + LL + Y+ E +K+L ++ L+ + + Sbjct: 241 VKDIEAMGIGTLLKEMKDKTPAEKIP---YKVEINKKLAVPFSTMMLSLLGVFLSIGHHR 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + I + + K + +++ + + L M KKK Sbjct: 298 SGKGANFALSLIVIFSYITCLNVGMVMATKGIIPAFI--GVWIPNVILFLLTLFMYKKK 354 >gi|110833357|ref|YP_692216.1| hypothetical protein ABO_0496 [Alcanivorax borkumensis SK2] gi|110646468|emb|CAL15944.1| membrane protein, putative [Alcanivorax borkumensis SK2] Length = 368 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 48/370 (12%), Positives = 134/370 (36%), Gaps = 20/370 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 YI R + + ++ +V + + ++ + ++ + + L + + +P L Sbjct: 2 ILHRYINRQVFMTTVLVTFILVMVLVSGRFIKYLAEAAAGQIAADALFLVMAFRMPEFLQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M+ P + VL M+ + E++++ G +++ ++ ++ ++ + + + Sbjct: 62 MIVPLSLYVALLLVLGRMHMDNEMVVLQAGGQGNGRVVRSLVVPILMATMLVGMFSLYVT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF-------- 174 P+ + + ++ + + L F + + N +G+ Sbjct: 122 PRGDAEVNRIFEEQKDRSVLELLTPGRFHVKGSSDSQRATYAEHLNREKGVLENVFVADA 181 Query: 175 -IVDSRDTQTHKIYYAQSGSIDLDR--QAIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 +A+SG + ++ ++L DG ++ P D + FK ++ Sbjct: 182 RFESQGGAGRLLTVWAKSGKLVVEDGISYLLLTDGLQYQGKPGQLDYKEVGFKEARVRIG 241 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 + + K ++ L+ +N +E R++ L I L +I Sbjct: 242 GEKTDSRPPKVRGRSTQELMEQQADNKEA--------LAELQWRISLILTVPIMALAAIP 293 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWG-FSYIIHKIEQNPYYIPILYLFLFCISSIF 350 A + ++ P + + G+ S I P+Y+ ++++ + +F Sbjct: 294 LARVNPRQGRFYRLIPAVLGYMLYVGMLLVCRSAIEDHKGVLPWYLSMVWIHVSAGLVVF 353 Query: 351 LLMIKKKYTK 360 LL + + Sbjct: 354 LLYFGARLFR 363 >gi|254427836|ref|ZP_05041543.1| putative permease, YjgP/YjgQ family [Alcanivorax sp. DG881] gi|196194005|gb|EDX88964.1| putative permease, YjgP/YjgQ family [Alcanivorax sp. DG881] Length = 372 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 50/370 (13%), Positives = 136/370 (36%), Gaps = 20/370 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 YI R + + ++ +V + + ++ + ++ + + L + + +P L Sbjct: 6 ILHRYINRQVFMTTVLVTFILVMVLVSGRFIKYLAEAAAGEIAADALFLVMAFRMPEFLQ 65 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M+ P + VL M+ + E++++ G +++ ++ ++ + + + + Sbjct: 66 MIVPLSLYIALLLVLGRMHMDNEMVVLQAGGQGNGRVVRSLVVPILMATTLVGMFSLYVT 125 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF-------- 174 P+ + + ++ + + L F + + N +G+ Sbjct: 126 PRGDAEVNRIFEEQKDRSVLELLTPGRFHVKGSSDSQRATYAEHLNREKGVLENVFVADA 185 Query: 175 -IVDSRDTQTHKIYYAQSGSIDLDR--QAIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 + +A+SG + ++ ++L DG ++ P D + FK ++ Sbjct: 186 RFESQGEAGRLLTVWAKSGKLVVEEGISYLLLTDGFQYQGKPGQLDYKEVGFKEARVRIG 245 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 + + K ++ L++ +N +E RL+ L I L +I Sbjct: 246 GEKTDSRPPKVRGRSTQELVDQRADNKAA--------LAELQWRLSLILTVPIMALAAIP 297 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWG-FSYIIHKIEQNPYYIPILYLFLFCISSIF 350 A + ++ P + + G+ S I P+Y+ ++++ L + +F Sbjct: 298 LARVNPRQGRFYRLIPAVLGYMLYVGMLLVCRSAIEDHKGSLPWYLSMVWIHLSAGAVVF 357 Query: 351 LLMIKKKYTK 360 LL + + Sbjct: 358 LLYFGGRLFR 367 >gi|28868484|ref|NP_791103.1| hypothetical protein PSPTO_1273 [Pseudomonas syringae pv. tomato str. DC3000] gi|213968382|ref|ZP_03396526.1| membrane protein [Pseudomonas syringae pv. tomato T1] gi|301384648|ref|ZP_07233066.1| hypothetical protein PsyrptM_18507 [Pseudomonas syringae pv. tomato Max13] gi|302058899|ref|ZP_07250440.1| hypothetical protein PsyrptK_02847 [Pseudomonas syringae pv. tomato K40] gi|302133012|ref|ZP_07259002.1| hypothetical protein PsyrptN_16559 [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28851722|gb|AAO54798.1| membrane protein, putative [Pseudomonas syringae pv. tomato str. DC3000] gi|213927020|gb|EEB60571.1| membrane protein [Pseudomonas syringae pv. tomato T1] gi|331015231|gb|EGH95287.1| hypothetical protein PLA106_04712 [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 353 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 45/355 (12%), Positives = 107/355 (30%), Gaps = 4/355 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + + L I+ + + + + + + T +L L P Sbjct: 1 MVKLDRYIGKSVFLAILAVLGIILGLVSLFAFIDEMADI-NDTYTLVDALSYVMMTAPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ ++EL I+ G S ++ V+ +LL + + Sbjct: 60 VYDTLPMAALIGCLIGLGTLASSSELTIMRAAGVSIGRIVWSVMKPMLLLMVAGVLVGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + AQ + L+ R D+ + L Sbjct: 120 VAPYAENQAQAARSLAQGSGDAQSARHGLWHRQGDEFIHINTVQPNGLMLGVTRYRFDDQ 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 +A+ D L D ++ + + + ST+++ Sbjct: 180 RHMLTSSFAKEAHFKTD--YWELKDVSTTHFKEGRTEVVNAPDERWDVSLSPQLLSTVIM 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 ++S L + + Y F ++ Q V L++I Sbjct: 238 PPESLSISGL-WSYAHYLADQGLSNGRYWLAFWTKVLQPAVTVALVLMAISFIFGPLRSV 296 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + + +F + + P + +L C + L+ + Sbjct: 297 TLGQRVFTGVVVGFTFRIIQDLLGPSSLLFGFPPLLAVLIPAAACAFAGLYLLRR 351 >gi|170723397|ref|YP_001751085.1| permease YjgP/YjgQ family protein [Pseudomonas putida W619] gi|169761400|gb|ACA74716.1| permease YjgP/YjgQ family protein [Pseudomonas putida W619] Length = 371 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 43/353 (12%), Positives = 119/353 (33%), Gaps = 26/353 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + + ++ I + ++ + + ++L I G+ +P L Sbjct: 2 IVFRYLSREVLVTLSAVSAVLLVIIMSGRFIKYLAQAAQGVLDPSVLFLIMGFRLPGFLQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ TG S+ L+ + A L+++ + + Sbjct: 62 LILPLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLLGLTMAPAALVALLVAWLSLSLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFF--------RLDDDLYIKISKYNPNNTLQGIF 174 P + ++Q+ + F L F ++L S + F Sbjct: 122 PLGVAQVQQIIGQQDALTEFDTLVPGRFQTLRDGSRVTYTEELTDDRSNLTGVFISEKRF 181 Query: 175 IVDSRDTQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 D + + A+ G + + ++L +G + +P D +K+ +Y + Sbjct: 182 NQDKTKDRAPSVLVAEKGHQEVQADGNRYLVLQNGYRYDGNPGQADYRAIKYDTYGVLLP 241 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S V + S L+ R+E R++ + I L+++ Sbjct: 242 KPEVSEEVTEREAIPTSQLI----------GNAGLRERAELQWRISLPILVFIVTLLAVP 291 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLF 342 + ++ + + ++ + + + + P + + ++ Sbjct: 292 L---SRVNPRQGRFLKLLPAILLYMAYLTMLISVRGALEKGKLPIALGMWWVH 341 >gi|104783411|ref|YP_609909.1| hypothetical protein PSEEN4442 [Pseudomonas entomophila L48] gi|95112398|emb|CAK17125.1| conserved hypothetical protein; putative membrane protein [Pseudomonas entomophila L48] Length = 371 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 50/366 (13%), Positives = 122/366 (33%), Gaps = 26/366 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + + ++ I + ++ + + +L I G+ +P L Sbjct: 2 IVFRYLSREVLVTLSAVSAVLLVIIMSGRFIKYLAQAAQGVLDPGVLFMIMGFRLPGFLQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ TG S+ L+ L A L+++ + + Sbjct: 62 LILPLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLLAMTLAPAALVALLVAWLSLSLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFF--RLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + ++++ A+ F L F R + + L G+FI + R Sbjct: 122 PLGVAQVQKIIAQQDALTEFDTLVPGRFQTLRDGSRVTYTEQLSDDRINLAGVFISEKRF 181 Query: 181 TQTHKIYYAQSGSI---------DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 Q A S + + ++L +G + +P D +K+ +Y + Sbjct: 182 NQDKTKDRAPSVLVAEKGHQEVQADGNRYLVLQNGYRYDGNPGQADYRAIKYDTYGVLLP 241 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 + V + S L R+E RL+ L + L+++ Sbjct: 242 KPEVAEEVTEREAIPTSDLF----------GNPGVRERAELQWRLSLPLLVFVVTLLAVP 291 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSI 349 + ++ + + ++ + + + + P + I ++ + Sbjct: 292 L---SRVNPRQGRFLKLLPAILLYMAYLTMLISVRGALEKGKLPISLGIWWVHGLFLLIG 348 Query: 350 FLLMIK 355 LM Sbjct: 349 LALMYW 354 >gi|189425644|ref|YP_001952821.1| permease YjgP/YjgQ family protein [Geobacter lovleyi SZ] gi|189421903|gb|ACD96301.1| permease YjgP/YjgQ family protein [Geobacter lovleyi SZ] Length = 359 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 53/359 (14%), Positives = 122/359 (33%), Gaps = 8/359 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R FL+ + + ++ ++++ S + SL+ +L+ + IP +L Sbjct: 4 IVGRYLAGTWLRLFLLCQGGFLAVYLILDFMEKLGRFSKAGASLSAILQFFLFKIPEMLG 63 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 PF M T L ++R++EL + + G S ++ P+L L +L S+ L ++ + Sbjct: 64 QTMPFAVLMATLLALGMLSRSSELTALRSCGLSIPRIVLPILMLGLLGSLVLLVNSEFVV 123 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 PK ++ + + + + I +K T + + Sbjct: 124 PKSYQQMEHIEKVVIKKQSVNTFFRLNNIWFRSNNLILQAKVFEPLTRTLKGVTVWELSA 183 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + L R + S L + + + A Sbjct: 184 DMQPVRRMDAEQALYGSGGWELLQVRTRSFAGQGGVVASARLSVPLTLKVDDLRILDNNA 243 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 ++ + L + YR+ H +L + ++ I A R Sbjct: 244 DNFSFRKL-REYAVSLEKGGYPAGRYRTMMHAKLALPFGAFVMVVLGIPFAL--KTGRTS 300 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF----LFCISSIFLLMIKKK 357 + ++I F ++ + + ++ P + + +F ++ I+L M K+ Sbjct: 301 GVAMGVGAGVAIGFA-YFIINAAVQSYGRSGVLPPFVAAWGANLIFVLTGIWLSMTVKQ 358 >gi|146308540|ref|YP_001189005.1| permease YjgP/YjgQ family protein [Pseudomonas mendocina ymp] gi|145576741|gb|ABP86273.1| permease YjgP/YjgQ family protein [Pseudomonas mendocina ymp] Length = 354 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 42/357 (11%), Positives = 112/357 (31%), Gaps = 5/357 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + L I+ +A + + ++ ++ L L P Sbjct: 1 MAKLDRYIGAQVFFAILTVLGIILGLALLFAFIDELSDLNKGDYGLGQALWYVLLTAPRR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ N+EL I+ G S ++ V+ ++L + + Sbjct: 61 AYEMLPMAALIGCLIGLGTLASNSELTIMRAAGVSIGRIVWAVMKPMLVLMLAGILIGEY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A AQ + ++ R + + L + Sbjct: 121 VAPLTENQAQADRALAQGGGAAQSSKRGMWHRQGQEYVHINAVQPGGLLLGVTRYRFDDE 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + +A+ +L + + ++ + + + ++ ST+V+ Sbjct: 181 RRLQSASFARRAE--HRGDHWVLRNVQTTFLHDNRSEVVNQREERWDIELSPQLLSTVVM 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + +++ L + + Y F ++ Q L L++I R Sbjct: 239 EPESLSITGL-WQYIHYLAEQGLNNARYWLAFWTKVLQPLVTGALVLMAISFIFGPL--R 295 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 +F + + F + + + L I ++ + + ++ Sbjct: 296 SVTLGQRVFTGVLVGFIFRIAQDLLGPSSLVFGFSPLLAVLVPAGICALAGVWLLRR 352 >gi|322834555|ref|YP_004214582.1| permease YjgP/YjgQ family protein [Rahnella sp. Y9602] gi|321169756|gb|ADW75455.1| permease YjgP/YjgQ family protein [Rahnella sp. Y9602] Length = 356 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 47/354 (13%), Positives = 113/354 (31%), Gaps = 2/354 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI R I + +M+ +V ++ +I+ + ++ V S + +P + + Sbjct: 5 LDRYIGRTIFNTIMMTLFMLVSLSGIIKFVDQLRKVGQGGYSAAGAGLYTLLSVPKDIEI 64 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L ++ +EL+++ +G +R+ + V+ AI L + + P Sbjct: 65 FFPMAALLGALLGLGTLATRSELVVMQASGFTRMQIAASVMKTAIPLVLLTMAIGEWVAP 124 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + + Q+ +N + D +I I + L G+ I + Sbjct: 125 QG-EQMARNYRAQQMYGGSLLSTQNGVWAKDGHDFIYIERVAGEKELTGVNIYHFNEENK 183 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 + S + + + + E + S + + L + Sbjct: 184 LQSVRYASSATFDNGEWKLSQVDESDLTDQLQITGSQTLTGVWKTNLTPDKLGVVALDPD 243 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 ++S L N + + Y+ ++ L + L+++ Sbjct: 244 ALSISGLHN-YVKYLKQSGQEAKRYQLNMWSKIFSPLSVAVMMLMALSFIFGPLRSVPMG 302 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I F V + + P + L L++KK+ Sbjct: 303 VRVVTGICFGFLFYVLDQIFGPLSLVYSIPPILGALLPSGLFFVISMFLLLKKR 356 >gi|260771006|ref|ZP_05879935.1| putative membrane protein [Vibrio furnissii CIP 102972] gi|260614243|gb|EEX39433.1| putative membrane protein [Vibrio furnissii CIP 102972] gi|315179054|gb|ADT85968.1| hypothetical permease, YjgP/YjgQ family [Vibrio furnissii NCTC 11218] Length = 356 Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats. Identities = 55/358 (15%), Positives = 125/358 (34%), Gaps = 5/358 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I + ++ V ++ +I+ ++++ V T L L IP + Sbjct: 3 KILDWYIGRTIIATTMLVLATFVGLSGIIKYVEQLRKVGDGTYDLMQALLFVVLSIPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L ++ ++EL+++ G S++ + VL A+ L I + + Sbjct: 63 EMFFPMAALLGALIGLGALAASSELVVMQAAGFSKLDIGLSVLKTAVPLMIIITLLGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + L A A + ++ R +D +N L G+ + + Sbjct: 123 APQAQKAARDLRAFATSGGKILSVRTGVWARDINDFIFI--GKIDDNRLYGMNMWRFDEH 180 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI-SKDISIMKFKSYTLQTESANSSTIVL 240 + + L + ++ D EV + + + + + + Sbjct: 181 KQLRHVIFAKQVDYLGGNSWVMKDVEVTDMNDDVVITKQSLPEYRWETSLAPDKLAVVTV 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K + LS L + + + Y F +++TQ + L+++ Sbjct: 241 KPEELALSGLYD-YVHYLKASEQDASRYELAFWRKITQPFSIAVMMLMALSFIFGPLRSV 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + +F + F + + P + SI LL++++K Sbjct: 300 TMGARILSGVIAGFTFYISSEFFGPLSLVYGIPPVFGAVA-PSIVFLSIALLLLRRKL 356 >gi|224024955|ref|ZP_03643321.1| hypothetical protein BACCOPRO_01686 [Bacteroides coprophilus DSM 18228] gi|224018191|gb|EEF76189.1| hypothetical protein BACCOPRO_01686 [Bacteroides coprophilus DSM 18228] Length = 369 Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats. Identities = 54/363 (14%), Positives = 123/363 (33%), Gaps = 7/363 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 +K + YI+ ++ + I+ IA V I + I+ ++ L I+ IP Sbjct: 11 LKRLDKYIIIKFLGTYFFAIALIISIAVVFDINENIDDFINNKAPLKAIVFDYYLNFIPY 70 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + +TG S L+ P + A ++++ +I Sbjct: 71 YTNLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRLMVPYMISAGIIALVTYILST 130 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P T + + Y+ + + N T + Sbjct: 131 EVIPTGSVTRLKFEQVYKNKKKVDYVRNIQLEVDSGVIAYMERYEDYNRTGYRFSLDKFE 190 Query: 180 DTQTHKIYYAQSGSIDLDR-QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 D + A+ + D I+ D + + + I+ + E + Sbjct: 191 DHKLVSHLTARRVTYDTATVHKWIIRDYMIREMKGMRETITRGDRMDSIINMEPQDFLIT 250 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + L ++ + E++KR+ I +I + + Sbjct: 251 RGQQETMTSPQLREYIDKQKKRGFANIKIFEVEYYKRIATSFAAFILTVIGLSL---SSQ 307 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL-LMIKKK 357 R+ + I + +SF + F I N P L +++ I +F+ + + +K Sbjct: 308 KRKGGMGLHLGIGIGLSFS-YILFQTISSTFAINGNVPPNLAVWIPNILYLFIAIYLYRK 366 Query: 358 YTK 360 K Sbjct: 367 APK 369 >gi|271498969|ref|YP_003331994.1| permease YjgP/YjgQ family protein [Dickeya dadantii Ech586] gi|270342524|gb|ACZ75289.1| permease YjgP/YjgQ family protein [Dickeya dadantii Ech586] Length = 356 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 43/356 (12%), Positives = 116/356 (32%), Gaps = 2/356 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + YI + I + +M+ +V ++ +I+ + ++ V S+ + +P + Sbjct: 3 RVLDRYIGKTIFNTIMMTLFMLVSLSGIIKFVDQLRKVGQGGYSVMGAGLYTLLSVPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ +EL+++ +G +R+ + V+ AI L + + Sbjct: 63 EIFFPMAALLGALLGLGALATRSELVVMQASGFTRLQIAGSVMKTAIPLVLLTMAIGEWV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + + ++ + D + ++ I + +N LQG+ + Sbjct: 123 APAG-EQMARNYRSQMMYGGSMLSTQSGLWAKDGNDFVYIQRVAGDNELQGVNLYHFDKH 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + ++ + + E S + + L Sbjct: 182 SKLLSVRYAASAVYENGSWKLSQVEESDLNDSKQIGGSQTVSGEWKTNLTPDKLGVVALD 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + ++ L + + Y+ +L L + L+++ Sbjct: 242 PDALSIRGLYD-YIKYLRQSGQEANRYQLNMWSKLFAPLSVAVMMLMALSFIFGPLRSVP 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I IS F V + + P + L + +L++K++ Sbjct: 301 AGMRIVIGISFGFLFYVLDQIFGPLSLVYHMPPVLGALLPSALFLFISVMLLLKRR 356 >gi|240014488|ref|ZP_04721401.1| hypothetical protein NgonD_07558 [Neisseria gonorrhoeae DGI18] gi|240121010|ref|ZP_04733972.1| hypothetical protein NgonPI_04426 [Neisseria gonorrhoeae PID24-1] Length = 356 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 43/360 (11%), Positives = 116/360 (32%), Gaps = 4/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +IL + + + +L + +P Sbjct: 1 MNLISRYIIRQMAVMAVCALLAFLALYSFFEILYETGNLGKGSYGIWEMLGYTALKMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + +EL +I +G S L+ + + +I Sbjct: 61 AYELMPLAVLIGGLASLSQLAAGSELAVIKASGMSTKKLLLILSQFGFIFAIAAVALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A A + + + + I + P++TL GI I D Sbjct: 121 VAPTLSQKAENIKAAAINGKISTDH--TGLWLKEKNSIINVRGMLPDHTLLGIKIWARND 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ + L + + S +++ + +++ Sbjct: 179 KNELAEAVEADSAVLNSDGSWQLKNIRRSIMGTDKIETSAAAEETWPIAVRRNLMDVLLV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K + ++ L + + + Y + ++L + + L++ + Sbjct: 239 KPDQMSVGELT-TYIRHLQNNSQNTQIYAIAWWRKLVYPVAAWVMALVAFAFTPQTTRHG 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 I L + F + ++ P ++ L + + + +I+K+ + Sbjct: 298 NMGLKLFGGICLGLLFHLAGRLFGFTSQLYGTPPFLAG-ALPTIAFALLAVWLIRKQEKR 356 >gi|307155108|ref|YP_003890492.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 7822] gi|306985336|gb|ADN17217.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 7822] Length = 405 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 45/372 (12%), Positives = 117/372 (31%), Gaps = 20/372 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + YI + +++S + + + N V + LKI Y +P Sbjct: 34 SLMDRYIATQLIPPYILSVGLFTSMGVAIANLSDLSNKVLEYDLPIVDALKILLYRVPEF 93 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 P + T ++ +EL+ + + G S P + L+++++ FI Sbjct: 94 FSYALPISVLLTTLMTYGRLSSESELIALRSCGISLWRATIPAVMLSLIVTGLTFIFNEC 153 Query: 121 IEPKCRST------------IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN 168 + P+ K + ++ L + ++ Sbjct: 154 VVPETNYRATGILVKVLHEERHFWQNKDIFYPNYEQIKLPNGQTLRQLKSLFYAEKFDGQ 213 Query: 169 TLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 +Q + I++ + ++I + + + D+ DG V+ + + FK Sbjct: 214 KMQSLTIINWLGERLNEIVVSDTAQWNSDQNIWDFFDGTVYLIDGNAAYKEAVTFKHQQF 273 Query: 229 QTESA--NSSTIVLKANDQNLSF-LLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIF 285 ++ + NL + N + + + + +++ ++F Sbjct: 274 PLPKEAFEFASQGRSPYEMNLFQAVQYKNLLQESGDTKNVRFFEVRIQQKIAFPFICLVF 333 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLF 344 G++ K + + + +++ I F + + + +L F Sbjct: 334 GVMGAAIGAKPQQMSRG---TSLGLTVGIVFAYYMVNFFTGSFGMIGLLSPSMAAWLPNF 390 Query: 345 CISSIFLLMIKK 356 I ++KK Sbjct: 391 FGVGIGGWILKK 402 >gi|22297556|ref|NP_680803.1| hypothetical protein tlr0012 [Thermosynechococcus elongatus BP-1] gi|22293733|dbj|BAC07565.1| tlr0012 [Thermosynechococcus elongatus BP-1] Length = 379 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 53/361 (14%), Positives = 109/361 (30%), Gaps = 11/361 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIA-WVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + YILR + R F+ IA + + I + L +++ +PT Sbjct: 18 SLLDRYILREMIRPFVFGFGIFTAIAAVIGTVFYLIRNMVEHHLGLLSAIQVFFLRLPTF 77 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN- 119 + P + ++R +EL+ + G S + L++P L + F Sbjct: 78 AVLGIPMAMLFGALLSYSQLSRRSELIACKSCGVSPVRLVRPALLAGFCALLCTFALNEL 137 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P IK L + R D ++ + + + Sbjct: 138 VAPPLAYRAIKTLEVAIHRPQPTFQTRNIFYRRFGDGHLRQLFFAHRFDGKVMGQVTVLN 197 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 Q + A + G H F + Sbjct: 198 FEQGELREIITAQEAQWQGSAWLFRQGTYHHLRGDRDYDVAEIFSERRFAYPRTPLDLAM 257 Query: 240 L-KANDQNLSFLLNPNPNNPNYRP--ELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + S + + L +R + ++L+ + F +I V Sbjct: 258 ETRVPEFMTSREIYRYLQILAESGDAKRLRQWRVQLQEKLSLPFLCLSFAVIGAVLGISS 317 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF--CISSIFLLMI 354 Q + +S++I FG ++ ++I + PI+ +L +S+I L M+ Sbjct: 318 PRQGQGR---AFGLSVAIIFG-YYVAAFIFTAFGEGGAVHPIVASWLPKGIVSAIALGML 373 Query: 355 K 355 Sbjct: 374 Y 374 >gi|66044343|ref|YP_234184.1| permease YjgP/YjgQ [Pseudomonas syringae pv. syringae B728a] gi|302188386|ref|ZP_07265059.1| permease YjgP/YjgQ [Pseudomonas syringae pv. syringae 642] gi|63255050|gb|AAY36146.1| permease YjgP/YjgQ [Pseudomonas syringae pv. syringae B728a] gi|330899517|gb|EGH30936.1| permease YjgP/YjgQ [Pseudomonas syringae pv. japonica str. M301072PT] gi|330950946|gb|EGH51206.1| permease YjgP/YjgQ [Pseudomonas syringae Cit 7] gi|330969234|gb|EGH69300.1| permease YjgP/YjgQ [Pseudomonas syringae pv. aceris str. M302273PT] Length = 375 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 47/366 (12%), Positives = 117/366 (31%), Gaps = 26/366 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + + ++ + ++ + +S +L I G+ +P L Sbjct: 2 IVFRYLSREVLLTLSAVSAVLLVFIMSGRFIKYLAQAASGALDPGVLFLIMGFRLPGFLQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ TG S+ L+ + A L+ + + + Sbjct: 62 VILPLGLFLGILMAYGRLYLESEMTVLAATGMSQQRLLAITMGPATLVGLLVAWLSFSLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFF--RLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + L + F L F R + + L G+FI + R Sbjct: 122 PQGATQFSLLINQQDAMTEFDTLVPGRFQALRDGTRITYTKELSEDRSQLAGVFISEKRM 181 Query: 181 TQTHKIYYAQSGSIDLDRQ---------AIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 + + + +IL +G + +P + D ++K+ +Y Sbjct: 182 SSDKSKDNGITVLVAEKGHQEVRPNGSRFLILENGYRYDGNPGAADYRVIKYDTYGAMLP 241 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S + S L+ +E R++ L I L++I Sbjct: 242 KPEISEEITDREAIPTSELI----------GNPAPRSVAELQWRISLPLSVFIVTLMAIP 291 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSI 349 + ++ + + ++ + + + + P + + ++ +S Sbjct: 292 L---SRVNPRQGRYLKLLPAILLYMSYLAILISVRSSLEKGKLPLSLGMWWVHAIYLSIG 348 Query: 350 FLLMIK 355 LL Sbjct: 349 LLLFYW 354 >gi|330938932|gb|EGH42431.1| permease YjgP/YjgQ [Pseudomonas syringae pv. pisi str. 1704B] Length = 375 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 47/366 (12%), Positives = 118/366 (32%), Gaps = 26/366 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + + ++ + ++ + +S +L I G+ +P L Sbjct: 2 IVFRYLSREVLLTLSAVSAVLLVFIMSGRFIKYLAQAASGALDPGVLFLIMGFRLPGFLQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ TG S+ L+ + A L+ + + + Sbjct: 62 VILPLGLFLGILMAYGRLYLESEMTVLAATGMSQQRLLAITMGPATLVGLLVAWLSFSLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFF--RLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + L + F L F R + + L G+FI + R Sbjct: 122 PQGATQFSLLINQQDAMTEFDTLVPGRFQALRDGTRITYTKELSEDRSQLAGVFISEKRM 181 Query: 181 TQTHKIYYAQSGSIDLDRQ---------AIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 + + + +IL +G + +P + D ++K+ +Y Sbjct: 182 SSDKSKDNGITVLVAEKGHQEVRPNGSRFLILENGYRYDGNPGAADYRVIKYDTYGAMLP 241 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S + S L+ + +E R++ L I L++I Sbjct: 242 KPEISEEITDREAIPTSELI----------GDPAPRSVAELQWRISLPLSVFIVTLMAIP 291 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSI 349 + ++ + + ++ + + + + P + + ++ +S Sbjct: 292 L---SRVNPRQGRYLKLLPAILLYMSYLAILISVRSSLEKGKLPLSLGMWWVHAIYLSIG 348 Query: 350 FLLMIK 355 LL Sbjct: 349 LLLFYW 354 >gi|192358887|ref|YP_001981939.1| putative permease, YjgP/YjgQ family [Cellvibrio japonicus Ueda107] gi|190685052|gb|ACE82730.1| putative permease, YjgP/YjgQ family [Cellvibrio japonicus Ueda107] Length = 352 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 44/357 (12%), Positives = 108/357 (30%), Gaps = 5/357 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ YI R + + ++ L + + ++ + ++ + + +P Sbjct: 1 MRKITGYISRTVFSAIALTLLVFISLDFIFSFIDQLGKI-RGGYTSREAFIYMSLTVPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P+ + + L + ++EL +I G S + L A + + I Sbjct: 60 LYELIPYSCLIGSLVGLGLLANSSELTVIRAAGVSVKRIAWMALRPAFVFIVAAVILGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + + Y+ + P+ + G+ + Sbjct: 120 VAPYTEQMADNRRLLVR---DNWVRTTTNMWNREGNEYMHVQAVLPSGVIYGLTRYQFDE 176 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + +I + D V R ++ + + + + +V+ Sbjct: 177 QRRLVAASYTKQAIYQEEGYWQEEDVAVTRIGEQGVSNDLLPSRRWETPLKPNLLNILVM 236 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 D ++S L N N + Y F ++ Q L + LI+I Sbjct: 237 DPEDMSISNL-NYYSNYLKEQNLRPGNYALAFWQKTLQPLATMSLVLIAISFIFGPLRSV 295 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + I + F + + +L + CI L+ + + Sbjct: 296 TMGQRIFTGIVFGVGFQLLQKLMGPASMVFGFAPVFAVLIPIVICILVGVFLLSRAR 352 >gi|317486217|ref|ZP_07945051.1| permease YjgP/YjgQ family protein [Bilophila wadsworthia 3_1_6] gi|316922516|gb|EFV43768.1| permease YjgP/YjgQ family protein [Bilophila wadsworthia 3_1_6] Length = 385 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 44/361 (12%), Positives = 111/361 (30%), Gaps = 8/361 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + I + I F+++ ++ + + + +Q L + + + GY+ P L Sbjct: 3 SLLQRQIFKEIANLFVLAVGVLLTLILISRAVQMRELFLGLDLGILDTVLLFGYMTPLFL 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 +V P + M+ + EL+ + G + ++ L +++ + Sbjct: 63 MLVIPIACMLSVFLTFLRMSTDRELVALRAGGINIYQMLPAPLLFSVICMLLTLWVSLHW 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRD 180 ++ + ++ +F +L + + NP + + + + D Sbjct: 123 LAWGMGHFRETILEIANTRARVVVQPGVFNTDFPNLVLFARQVNPGDGDMSQVLVDDRSH 182 Query: 181 TQTHKIYYAQSGSIDLD----RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--AN 234 + H A G D D +L DG+++ + L +S + Sbjct: 183 PERHMTILAPEGRFDTDTERGELVFLLEDGKIYTTDKKGASVLAFDEYKVRLPLDSLFKS 242 Query: 235 SSTIVLKANDQNLSFLLNPNPNN-PNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 ++ + + S L + E HKR + + L + A Sbjct: 243 LDLGDVRPREMSWSKLSSITREEALKVDANYANKLEVERHKRWAYPVACIALTLFVLPLA 302 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + ++ + + + + P + LF I+ L Sbjct: 303 SAFEGLHRQTGLMLALAMFFVYYSLMSLGFSTGESGAIPPSIGLWVPNILFLCLGIYGLW 362 Query: 354 I 354 + Sbjct: 363 L 363 >gi|220907915|ref|YP_002483226.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 7425] gi|219864526|gb|ACL44865.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 7425] Length = 389 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 54/364 (14%), Positives = 132/364 (36%), Gaps = 14/364 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y+L + +F+ S I V + + + + L++LL++ +P + Sbjct: 22 LLDRYVLSALLTAFVFSVAAFTGIGVAVGVVFDLVQDFADAQIPLSLLLQLLWLQLPYTI 81 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + + + ++ ++EL+ + + G L+ PV+ +L+ F + Sbjct: 82 SFCLPLGVLLASLSTFNRLSADSELVALQSVGVGIYRLVLPVVLFGLLVGGLAFGFNTSL 141 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD----LYIKISKYNPNNTLQGIFIVD 177 P RS QL + +N+F+ + ++ + G+ ++D Sbjct: 142 VPASRSQSSQLLQEVVQQGQAVTQAQNIFYPEYGPDREIQRLFYARQFDGQQMYGLTVLD 201 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 T +++ A+S D +G ++ +I++F LQ + Sbjct: 202 FSQTGVNQVITAESAVWDSTISVWTFTNGTIYLVDADGSYRNILQFTEQQLQIPRDPLAL 261 Query: 238 IVLKAN--DQNLSFLLNPNPN-NPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 K + + +L+ P+ P + + ++ +I GLI Sbjct: 262 ATPKPSISEMSLAEARRYLEQLQPDGDPREIRKLQLYIQQQYAIPWQGLILGLIGAGLGI 321 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF--CISSIFLL 352 K R+ + +SL I F + S++ + ++ P++ + + L Sbjct: 322 KSQPRRKSR---GFGLSLVIIFA-QYVLSFLTAALARSGGLSPLVAAWSVNGLGLGVALW 377 Query: 353 MIKK 356 ++ + Sbjct: 378 LLLR 381 >gi|319902150|ref|YP_004161878.1| permease YjgP/YjgQ family protein [Bacteroides helcogenes P 36-108] gi|319417181|gb|ADV44292.1| permease YjgP/YjgQ family protein [Bacteroides helcogenes P 36-108] Length = 378 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 59/363 (16%), Positives = 128/363 (35%), Gaps = 7/363 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 +K + YI++ +++ + I+ IA V ++++ S N I+ IP Sbjct: 20 LKRLDWYIIKKFLGTYVFAIALIISIAVVFDFNEKMDRFMSHEAPWNAIVFDYYLNFIPY 79 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + +TG S +++P + A ++++ F + Sbjct: 80 FANLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFRRMLRPYMVSAAIIAVITFCLGS 139 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 I PK T K + + + + T + R Sbjct: 140 YIIPKGSVTRINFEDKYYKPRKANTARNIQLEVDSGVIAYIERFEDYSKTGYRFSLDKFR 199 Query: 180 DTQTHKIYYAQSGSIDLDR-QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 D Q A+S + D I+ D + + + I+ TL E A+ + Sbjct: 200 DKQLVSHLTARSITYDTTSVHKWIVKDYMIRAMDGMKESITKGDRIDTTLFMEPADFLIM 259 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + L ++ + E+HKR+ I LI + + Sbjct: 260 KNQQEMLTSPQLSEYIDRQRQRGFANIKEFEIEYHKRIAMSFASFILTLIGVSL---SSK 316 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF-CISSIFLLMIKKK 357 + + I L++SF + F I N P++ +++ + + L + +K Sbjct: 317 KTKGGMGLHLGIGLALSFS-YILFQTIASTFAVNGNVPPVIAIWIPNVLYAFVALYLYRK 375 Query: 358 YTK 360 K Sbjct: 376 APK 378 >gi|170723396|ref|YP_001751084.1| permease YjgP/YjgQ family protein [Pseudomonas putida W619] gi|169761399|gb|ACA74715.1| permease YjgP/YjgQ family protein [Pseudomonas putida W619] Length = 353 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 44/357 (12%), Positives = 117/357 (32%), Gaps = 6/357 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + + L I+ +A + + ++ + S T ++ + P Sbjct: 1 MVKLDRYIGQSVLMAILAVLGIILGLASLFAFIDEMSDL-SDTYTVMDAGWFTLLTAPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L S+ ++EL I+ G S ++ V+ ++L + + Sbjct: 60 LYDMLPMAALIGCLIGLGSLASSSELTIMRAAGVSIGRIVWAVMKPMLVLMLVGLLIGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + AQ + ++ R D+ S L + Sbjct: 120 VAPISENKAQADRSLAQGGGEAQSSKRGMWHRQGDEFVHINSVQPNGLLLGVTRYRFDDE 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + +A+ + D +L+D ++ + + + +T+VL Sbjct: 180 RKIVTSSFARRARYEND--HWVLSDVSTTYFRGDHTEVVKSSEERWDVSVTPQLLNTVVL 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 +++ L + + + Y F ++ Q L++I R Sbjct: 238 APESLSITGL-WDYIHYLSDQGLNNARYWLAFWTKVLQPAVTAALVLMAISFIFGPL--R 294 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 +F + + F + + + + + + ++ L + ++ Sbjct: 295 SVTLGQRVFTGVLVGFVFRIAGDLLGPSSQVFGFPPLLAVVIPAGVCALAGLWLLRR 351 >gi|317059424|ref|ZP_07923909.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R] gi|313685100|gb|EFS21935.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R] Length = 362 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 52/363 (14%), Positives = 122/363 (33%), Gaps = 12/363 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK ++Y+ + + F S + I + Q+ + + V+ S + G L+P + Sbjct: 2 MKKLDIYMTKNFLKYFSYSLFSFLGIFVLSQVFKVLRYVNEGQLSPGQIPLFIGNLLPGI 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + + M N E++ + +G L++ +F++ L+S+ +F + Sbjct: 62 IINVAPLAVLLGGLISINIMASNLEIISLKTSGIRFARLVRGPIFMSFLISLIVFYLNDR 121 Query: 121 -IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV--- 176 + + +EN FFR + Y+ K T + Sbjct: 122 VYPGSVVRNRELRGKEDVEEREVPKEKENAFFRNVEGRYVYYMKKINRETGIMDHVEVLD 181 Query: 177 -DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + ++ A+ G D R+ + D ++ + + + + Sbjct: 182 MSENFDKIERMITAKKGRYDFKRKLWVFEDAHIYYPDTDTVEARAFIQEQKYMDEPEYFI 241 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 S + Q ++ L + + SE KR + + + + Sbjct: 242 SLSNIVPKQQTIAEL-KKAIKEGSATGNEIREILSELGKRYSFPFASFVVSFLGLAL--- 297 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLM 353 + + I I IS+ + + + + N Y P L ++ + L Sbjct: 298 GSHYVRGMSILNIVISILLGYAYYLV-EGAFEALGMNGYLNPFLSGWIPNLLFLAAGLYF 356 Query: 354 IKK 356 +++ Sbjct: 357 MRR 359 >gi|319954060|ref|YP_004165327.1| permease yjgp/yjgq family protein [Cellulophaga algicola DSM 14237] gi|319422720|gb|ADV49829.1| permease YjgP/YjgQ family protein [Cellulophaga algicola DSM 14237] Length = 359 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 59/362 (16%), Positives = 134/362 (37%), Gaps = 8/362 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YIL+ +F + L + I ++ + ++ N + + LN +L G + Sbjct: 1 MTILDKYILKRYLVTFSVMLLLFIPIGIMVHLSEQYNKMQDNEAPLNEILMYLGNFSIYI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 M+ P + + + NTE++ + ++G S ++P L A++++ F+ + Sbjct: 61 GSMLLPIFLFLSVIFFTSKLAGNTEIVAMLSSGISYGRFLRPYLMGAVIVAAFMLLMGMF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + K + EN+F +L+ + +I +S+++P + F ++ + Sbjct: 121 IVPNASKGFNEFKFKYLKKGKQDRVTENIFNQLNANDFIYVSRFDPTRDIGYNFSMEHFN 180 Query: 181 TQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 Y + L ++ + + + + + + Sbjct: 181 KDNVLEYKLSAANIRWIEADSIYRLTSYVKRTLKGDTEILETKRRLDTVFPFKINDLTPV 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 A +NL L N + TY +KR T + I LI++ + Sbjct: 241 SYVAETKNLFELNEFIANEKRKGASNINTYILVKYKRWTMPITAFILTLIAVAV---SSQ 297 Query: 299 VRQRKKIHPIFISLSISFGVFW---GFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 R+ + + ++F + F + + +P I+ LF + +LL Sbjct: 298 KRRGGMGVNLAFGILVAFVYIFFDRVFGTLAEQSGFSPLLAVIVPNVLFGFLAFYLLQKA 357 Query: 356 KK 357 K+ Sbjct: 358 KR 359 >gi|52425603|ref|YP_088740.1| hypothetical protein MS1548 [Mannheimia succiniciproducens MBEL55E] gi|52307655|gb|AAU38155.1| unknown [Mannheimia succiniciproducens MBEL55E] Length = 356 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 43/357 (12%), Positives = 118/357 (33%), Gaps = 3/357 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + + YI + I + + L +V ++ +I+ +++ V + + +P Sbjct: 2 MNTLDRYIGKSILGAIFATLLTLVGLSGIIKFVEQFRSVGKGSYDSMQAFLYTVLTMPKD 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ +EL+++ + G SR+ + V+ A+ L + + Sbjct: 62 IETFFPMAALLGALIALGNLASRSELVVMQSAGFSRMKIGFAVMKTALPLVLLTMVIGEW 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + ++ +N + D + +I I + + L I+I D Sbjct: 122 GIPQT-EQFARDMRSKAISGGSMLSVKNGIWAKDGNDFIYIKRATEDANLNNIYIYSFND 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + + + + +L + S + + + Sbjct: 181 NRQLQRVSHAN-KASYENGSWVLKQVNESQISADEIKTKNYLNRPWKTSLTPDKLGIFTV 239 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K ++S L + + + + + + ++L Q + + ++++ Sbjct: 240 KPTSLSISGL-SSYISFLKETGQDSKKFELTYWRKLFQPISVGVMMMLALSFIFGPLRSV 298 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I F V + + I L L + + L+ +K+ Sbjct: 299 TAGARIVTGICFGFVFYVINEIFGPLSLVYNVAPIIGALMPSLLFLVITWWLLSRKR 355 >gi|253686793|ref|YP_003015983.1| permease YjgP/YjgQ family protein [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251753371|gb|ACT11447.1| permease YjgP/YjgQ family protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 358 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 40/355 (11%), Positives = 110/355 (30%), Gaps = 2/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + + + +V ++ +I+ + ++ V S + +P + + Sbjct: 5 LDRYIGKTIFTTIMTTLFMLVSLSGIIKFVDQLRKVGQGEYSALGAGLYTLLSVPKDIEI 64 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 65 FFPMAALLGALLGLGQLATRSELVVMQASGFTRLQIATAVMKTAIPLVLLTMAIGEWVSP 124 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + ++ + + L+ + +D + Sbjct: 125 QGEQMARNYRSQMISGGSMISTQGGLWAKDGNDFIYIERVAGDKELSGVNIYHFDDSNKL 184 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK-SYTLQTESANSSTIVLKA 242 + YA S + DR L+ + S + + + L+ Sbjct: 185 LSVRYAASAEFEDDRNVWRLSQVDESDLSDGKQIGGSQTLSGEWKTNLTPDKLGVVALEP 244 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++ L N + Y+ ++ + + L+++ Sbjct: 245 DALSIRGLHN-YAKYLKQSGQESSRYQLNMWSKIFAPVSVAVMMLMAVSFIFGPLRSVSA 303 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I IS F + + + P + + + L++K++ Sbjct: 304 GSRIVIGISFGFLFYLLNEIFRPLSLVYGIPPILGAILPSSVFLCISVALLLKRR 358 >gi|240113704|ref|ZP_04728194.1| hypothetical protein NgonM_09087 [Neisseria gonorrhoeae MS11] gi|240116445|ref|ZP_04730507.1| hypothetical protein NgonPID1_09468 [Neisseria gonorrhoeae PID18] gi|240122359|ref|ZP_04735315.1| hypothetical protein NgonP_00180 [Neisseria gonorrhoeae PID332] gi|240125093|ref|ZP_04737979.1| hypothetical protein NgonSK_02542 [Neisseria gonorrhoeae SK-92-679] gi|254494458|ref|ZP_05107629.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291] gi|260441667|ref|ZP_05795483.1| hypothetical protein NgonDG_11387 [Neisseria gonorrhoeae DGI2] gi|268599772|ref|ZP_06133939.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11] gi|268602117|ref|ZP_06136284.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18] gi|268680946|ref|ZP_06147808.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332] gi|268683688|ref|ZP_06150550.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679] gi|291045047|ref|ZP_06570755.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|226513498|gb|EEH62843.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291] gi|268583903|gb|EEZ48579.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11] gi|268586248|gb|EEZ50924.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18] gi|268621230|gb|EEZ53630.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332] gi|268623972|gb|EEZ56372.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679] gi|291011050|gb|EFE03047.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] Length = 356 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 43/360 (11%), Positives = 116/360 (32%), Gaps = 4/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +IL + + + +L + +P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGKGSYGIWEMLGYTALKMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + +EL +I +G S L+ + + +I Sbjct: 61 AYELMPLAVLIGGLASLSQLAAGSELAVIKASGMSTKKLLLILSQFGFIFAIAAVALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A A + + + + I + P++TL GI I D Sbjct: 121 VAPTLSQKAENIKAAAINGKISTGH--TGLWLKEKNSIINVRGMLPDHTLLGIKIWARND 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ + L + + S +++ + +++ Sbjct: 179 KNELAEAVEADSAVLNSDGSWQLKNIRRSIMGTDKIETSAAAEETWPIAVRRNLMDVLLV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K + ++ L + + + Y + ++L + + L++ + Sbjct: 239 KPDQMSVGELT-TYIRHLQNNSQNTQIYAIAWWRKLVYPVAAWVMALVAFAFTPQTTRHG 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 I L + F + ++ P ++ L + + + +I+K+ + Sbjct: 298 NMGLKLFGGICLGLLFHLAGRLFGFTSQLYGTPPFLAG-ALPTIAFALLAVWLIRKQEKR 356 >gi|167032003|ref|YP_001667234.1| permease YjgP/YjgQ family protein [Pseudomonas putida GB-1] gi|166858491|gb|ABY96898.1| permease YjgP/YjgQ family protein [Pseudomonas putida GB-1] Length = 353 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 42/357 (11%), Positives = 116/357 (32%), Gaps = 6/357 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + + L I+ +A + + ++ + S T ++ P Sbjct: 1 MAKLDRYIGQSVLMAILAVLGIILGLASLFAFIDEMSDL-SDTYTVMEAGNFVLLTAPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L S+ ++EL I+ G S ++ V+ ++L + + Sbjct: 60 LYEMLPMAALIGCLIGLGSLASSSELTIMRAAGVSIGRIVWAVMKPMLVLMLVGLLIGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + AQ + ++ R ++ + L + Sbjct: 120 VAPVTENKAQADRSLAQGGGEAQSSKRGMWHRQGEEYVHINAVQPNGLLLGVTRYRFDNE 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + +A+ D +L D ++ + + + +T++L Sbjct: 180 RKIVTSSFARRAQYQDD--HWLLADVRTTYFRGDHTEVVNAPQERWDVSLTPELLNTVIL 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 +++ L + + + Y F ++ Q + L++I R Sbjct: 238 APESLSITGL-WDYIHYLSDQGLNNARYWLAFWTKVLQPMVTAALVLMAISFIFGPL--R 294 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 +F + + F G + + + + + I ++ + + ++ Sbjct: 295 SVTLGQRVFTGVLVGFVFRIGQDLLGPSSQVFGFPPLLAVVIPAGICALAGVWLLRR 351 >gi|226946453|ref|YP_002801526.1| YjgP/YjgQ family permease [Azotobacter vinelandii DJ] gi|226721380|gb|ACO80551.1| permease YjgP/YjgQ family [Azotobacter vinelandii DJ] Length = 357 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 49/360 (13%), Positives = 118/360 (32%), Gaps = 17/360 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E Y++ R L+ + I + + ++ T S ++ I Y + Sbjct: 1 MLLIERYVISEARRPLLVMLGILTSIFAAYSAERYLGEAANGTLSPEVVFDIVVYKVMIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + L + ++E+ + G S + L V LA+ +++ + Sbjct: 61 LEVLVPVALYVSVALGLGRLYHDSEITAVAAAGMSPLRLYGAVAILALPIAVGVTALSLY 120 Query: 121 IEPKCRSTIKQLSAKAQLA-LTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 P + QL +++ L E ++ I + + ++ Sbjct: 121 GRPWAYANAYQLEQESKTELDIDHLLAERFNINAENGRMILAERVDRATDSLQDVLIFDG 180 Query: 180 DTQTHKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 ++Y +Q I D D + + +G + ++FK + + ++ Sbjct: 181 GESRTRLYRSQEARIADPDPDDPVVEMTNGTAYSLQHDGTQDKRIEFKRLNIHLQPLETN 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + P +E R ++ + I L++I R Sbjct: 241 MESRRKAA--SWQTLEASAGLPEQ---------AELQWRESRGVSTFILALLAIP--LSR 287 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R+ + + ++ + + G + P L+L + + L +I + Sbjct: 288 TAPRRGRFATLLPVTAVYAVIFYAGDICKSLVGNGSLPLTPGLWLVPLAMGLVLLALIVR 347 >gi|220935307|ref|YP_002514206.1| permease YjgP/YjgQ family protein [Thioalkalivibrio sp. HL-EbGR7] gi|219996617|gb|ACL73219.1| permease YjgP/YjgQ family protein [Thioalkalivibrio sp. HL-EbGR7] Length = 367 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 47/348 (13%), Positives = 122/348 (35%), Gaps = 19/348 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 Y++R + + L ++ I + + + + ++LL + L Sbjct: 4 SILTRYLVREVLLTQAAVTLVLLLIIVGGTVARMLREAAEGRIPADVLLPMVALGSVRGL 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 ++ P + L + +++E+ + G L + + ++ + L + L + Sbjct: 64 ILLLPVSLFLALMLSLGRLYKDSEMAAMKACGVGPEQLYRAIAWMTVPLLVMLTVLVFWG 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFR-LDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P I Q+ A+ + F I + + SR Sbjct: 124 SPLASQGIDQIRIDAEQRSDLVGIAPGRFTESRATGQVFFIEGLAGDGNTMRGVFIRSRG 183 Query: 181 TQTHKIYYAQSGSIDLD----RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + ++ A+ G +D ++ ++L+DG +R +P S++ I+ F+++ L+ S Sbjct: 184 PEGDEVVTARRGETRVDPLTGQRYLVLHDGYRYRGAPGSQEFHILAFETHGLRVPDPTGS 243 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 T K + + + L ++R+E H R+ + V+ ++ Sbjct: 244 TRRGKVDSLSTAELW----------QSTNLSHRAELHWRIAMPVSMVLLA--ALALPLSH 291 Query: 297 ALVRQRKKIHPIFISLSISFGV--FWGFSYIIHKIEQNPYYIPILYLF 342 + + + ++ + F S Q P ++ + ++ Sbjct: 292 TSNPRSGRFGKLTAAIGVYILYANFLILSKSWFASGQTPAWLGMWWVH 339 >gi|223936058|ref|ZP_03627972.1| permease YjgP/YjgQ family protein [bacterium Ellin514] gi|223895280|gb|EEF61727.1| permease YjgP/YjgQ family protein [bacterium Ellin514] Length = 372 Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 46/376 (12%), Positives = 112/376 (29%), Gaps = 26/376 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + Y+LR + + ++ I+ + L +++ +P+ Sbjct: 1 MRLLDRYLLRELLIPLRYCLGGFLIFWISFDLINSIHQFQEAKLHLFDVVQYYLITVPSF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L +V P + L++ R+ E+ I G S + P + + ++ S +F Sbjct: 61 LVIVLPMALLLALLYTLSNHARHHEITAIRAAGISLWRICIPYVAVGLVFSAAVFAINEY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD----LYIKISKYNPNNT-LQGIFI 175 P + + K + ++ + I YN + + Sbjct: 121 WIPDSDQKAQDILDKYKPNRPDGSNKDVYRNFGIPNGRDKRTWDIGSYNLKTEIMTDPKV 180 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD--------ISIMKFKSYT 227 A+ + P ++ +F Sbjct: 181 SWIDTNNLPHRLIAERAE--RTNDVWTFYNVTEFETMPDGFMGPTMKTNVVAHPEFSETP 238 Query: 228 LQT-----ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFP 282 Q S ++ KA + + +L+ +P + ++ H RL Sbjct: 239 DQIRREIKFSKRLTSHNAKAAEVPIVDILDYLDLHPVLTKKNKWWLYTQLHGRLAAPWTC 298 Query: 283 VIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 ++ ++I A +R + S+ I F ++ + + Y + + Sbjct: 299 LVVVFLAIPF---GAASGRRNIFVGVASSIVIVFA-YYVLLKLGLALGTGGYVPAWVAGW 354 Query: 343 L--FCISSIFLLMIKK 356 L F + + M+ + Sbjct: 355 LPDFVFGAAGIWMLLR 370 >gi|218778208|ref|YP_002429526.1| permease YjgP/YjgQ family protein [Desulfatibacillum alkenivorans AK-01] gi|218759592|gb|ACL02058.1| permease YjgP/YjgQ family protein [Desulfatibacillum alkenivorans AK-01] Length = 353 Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 59/351 (16%), Positives = 123/351 (35%), Gaps = 7/351 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YI R + ++ L +V I + ++I+ ++ L + IP V Sbjct: 1 MKIISKYIARALFKNLLTILFAVVVIYVAVDFFEKIDDFMAAKIPLLTVGYFFLLRIPYV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 V P + V+ M R+ E++ + G S +L+KP+ + ++ S+FLF I Sbjct: 61 AAQVLPVGVLLSAMVVIGLMARHNEIIAYASGGGSSFSLLKPIAVMGVIASLFLFAFNEI 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + Q+ Q + + + L ++ KY P ++ D Sbjct: 121 IVPAAAAEANQIWY--QDVRKEGDVGTRTTWFHRNGLIGRVDKYIPETHTARDITLNYYD 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 I + + L + + S + DI K + + V Sbjct: 179 PSFKLIKRIDADDATISGTVWTLRNA-MESVSGRASDIRQHKELKVEMDFTADQLHDRVK 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 ++++ +L L + + +R + +++ L +I ++ A + R Sbjct: 238 RSDEMSLVQL-KEHIHKIESEGYKAVRFRVDLASKISFPLVCLIMSVLGGAMALRGK--R 294 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 I + + ++F +W + + Y PI + L Sbjct: 295 GEGLAVNIVMGMGLAFA-YWVVHSLCLSLGYAGMYSPIFSAWTANAVFAVL 344 >gi|94500484|ref|ZP_01307015.1| hypothetical protein RED65_15478 [Oceanobacter sp. RED65] gi|94427274|gb|EAT12253.1| hypothetical protein RED65_15478 [Oceanobacter sp. RED65] Length = 354 Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 44/357 (12%), Positives = 108/357 (30%), Gaps = 5/357 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + YI + S L + + VI +L +++ + T + L PT Sbjct: 1 MRKIDAYIRSSVINSILAVLFVLGMLDLVIALLNQLDNL-RDTFTFADALYYVVASAPTR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L S+ ++EL I G S ++ + + ++ + + Sbjct: 60 LYEMIPMITLIGCLVGLGSLATHSELTAIRAAGVSTGRIMLSTIKASAIMMVLSLVMGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P A E + + + Y++ + PN L G+ + + + Sbjct: 120 IVPDLERMTTSFRTIALGREVAVTNEGKGHWHKEGNNYMRFAAIEPNGVLHGMTLYEFDE 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + +I + + + + + + + + Sbjct: 180 NKNLTKMTHAKRAIYQREHWS-MENVRITHIEDVRTEYKAKSIAPFDTELTPETLKFVAQ 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + D +S L + + ++ F K+L Q + + L+ I R Sbjct: 239 EPKDMAISTLY-KYGQYLDAQGLGGGEFKLAFWKKLLQPISTLALVLVGISFIFGPL--R 295 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 +F + + + + L + I+ + ++ Sbjct: 296 SVTMGQRLFTGILVGLVYKIVVDLLGPIGLLVGIGPLLANLIPIGLCMIWGSWMLRR 352 >gi|257126591|ref|YP_003164705.1| permease YjgP/YjgQ family protein [Leptotrichia buccalis C-1013-b] gi|257050530|gb|ACV39714.1| permease YjgP/YjgQ family protein [Leptotrichia buccalis C-1013-b] Length = 365 Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 52/365 (14%), Positives = 121/365 (33%), Gaps = 10/365 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI + + FI + +++ + + +S ++ Y +P V Sbjct: 1 MKIIDKYIYNSLILPSVFGISIFTFIMMLNVVMEVMERLFASDLPFISIIDYLFYAMPGV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + V ++ E++ ++ +G +I+P ++L++ E Sbjct: 61 LVQTIPMGAFLGVMLVYGGLSETNEIVAMEGSGVGLFRIIRPAFIFGVILTLIGLGLELY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNTLQGIFIVDSR 179 + P+ I + + + S EE +F ++ I + + + F++ ++ Sbjct: 121 VNPRALKNINAQTKQILASRPSSLTEEKVFLSNEEKGFGFYIDEVSNDKATAKNFLIINK 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES---ANSS 236 + D I L + + +++ + + Sbjct: 181 RGDNPYPIVFLAEDAKFDPGIIRLKKVKGYAFDKTGSSQVSAEYQEQEIPISTFFREKKQ 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPN--YRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + + NL L N E + E ++R+ L + + Sbjct: 241 ELKKSRKEMNLKELEKFYKANIKNPEEKEAALKAQVEIYQRIIGPLAS---TFLCWLGVL 297 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFLLM 353 R+ + ISL + FG SY + +N I +++ F + + + Sbjct: 298 LSVGHRRSGRGISFGISLIVIFGYIGMASYAKIMVLKNDVPASIAMWVPNFVLFILCIFF 357 Query: 354 IKKKY 358 KKY Sbjct: 358 SIKKY 362 >gi|194097860|ref|YP_002000905.1| hypothetical protein NGK_0280 [Neisseria gonorrhoeae NCCP11945] gi|239998341|ref|ZP_04718265.1| hypothetical protein Ngon3_02528 [Neisseria gonorrhoeae 35/02] gi|240016934|ref|ZP_04723474.1| hypothetical protein NgonFA_07156 [Neisseria gonorrhoeae FA6140] gi|240117143|ref|ZP_04731205.1| hypothetical protein NgonPID_01565 [Neisseria gonorrhoeae PID1] gi|240127074|ref|ZP_04739735.1| hypothetical protein NgonS_00193 [Neisseria gonorrhoeae SK-93-1035] gi|268594203|ref|ZP_06128370.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268602831|ref|ZP_06136998.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] gi|268685429|ref|ZP_06152291.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035] gi|193933150|gb|ACF28974.1| Conserved hypothetical integral membrane protein [Neisseria gonorrhoeae NCCP11945] gi|268547592|gb|EEZ43010.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268586962|gb|EEZ51638.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] gi|268625713|gb|EEZ58113.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035] gi|317163630|gb|ADV07171.1| hypothetical protein NGTW08_0197 [Neisseria gonorrhoeae TCDC-NG08107] Length = 356 Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 43/360 (11%), Positives = 116/360 (32%), Gaps = 4/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +IL + + + +L + +P Sbjct: 1 MNLISRYIIRQMAVMAVCALLAFLALYSFFEILYETGNLGKGSYGIWEMLGYTALKMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + +EL +I +G S L+ + + +I Sbjct: 61 AYELMPLAVLIGGLASLSQLAAGSELAVIKASGMSTKKLLLILSQFGFIFAIAAVALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A A + + + + I + P++TL GI I D Sbjct: 121 VAPTLSQKAENIKAAAINGKISTGH--TGLWLKEKNSIINVRGMLPDHTLLGIKIWARND 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ + L + + S +++ + +++ Sbjct: 179 KNELAEAVEADSAVLNSDGSWQLKNIRRSIMGTDKIETSAAAEETWPIAVRRNLMDVLLV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K + ++ L + + + Y + ++L + + L++ + Sbjct: 239 KPDQMSVGELT-TYIRHLQNNSQNTQIYAIAWWRKLVYPVAAWVMALVAFAFTPQTTRHG 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 I L + F + ++ P ++ L + + + +I+K+ + Sbjct: 298 NMGLKLFGGICLGLLFHLAGRLFGFTSQLYGTPPFLAG-ALPTIAFALLAVWLIRKQEKR 356 >gi|312131567|ref|YP_003998907.1| permease yjgp/yjgq family protein [Leadbetterella byssophila DSM 17132] gi|311908113|gb|ADQ18554.1| permease YjgP/YjgQ family protein [Leadbetterella byssophila DSM 17132] Length = 360 Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 54/360 (15%), Positives = 126/360 (35%), Gaps = 3/360 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPT 59 M + Y+++ +++ + IV + VI +++ + + I L P Sbjct: 1 MTKIDRYLIKRFLTTYVFAVFIIVLVILVIDFVEKNDDFMETKPSNHAIFFDYYLNLAPY 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++P + T M +TE++ I +GTS L+ P + +++I+ F+ Sbjct: 61 WANYISPLMIFISTVFFTAKMASHTEIIAILGSGTSFRRLMLPYFIGSGIVAIYSFVMVG 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 PK + K F + + S N +NT + Sbjct: 121 WFLPKANVPRIEFENKYIHNDFFFTGRDIHLAVQKNVYAYLSSYDNSSNTAYDFTLEKVE 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRK--SPISKDISIMKFKSYTLQTESANSST 237 + + + A+ + D + L D + + S + +++ ++ Sbjct: 181 NNRLVEKLSARRATYDDSLKKWKLYDYNIRKIGISKDEMTYEAITPLDTSIKLYPSDFGN 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + +S L + + E +ETY+ E+++R +I ++ ++ + ++A Sbjct: 241 SKNRQETMTISQLEDYIDLINSRGAEGVETYKIEYYQRFATPFAVIILSIMGLIVSARKA 300 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 +I F+ + + I NP L +F I S+ + + Sbjct: 301 RGGVGLQIAIGFVLAFLYIIFYILSKGIAEAGSMNPILAVWLPNIVFSIISVVMYFTVPR 360 >gi|307543948|ref|YP_003896427.1| permease [Halomonas elongata DSM 2581] gi|307215972|emb|CBV41242.1| K07091 [Halomonas elongata DSM 2581] Length = 361 Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 48/368 (13%), Positives = 120/368 (32%), Gaps = 22/368 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R I ++ ++ + + ++ + + ++IL + + +P L Sbjct: 2 IIFRYLTREILQTMAAVAGVLLLVIMGSRFIRYFSNAAEGEIPVDILGTLMLFHLPGFLE 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + L + N+E+ ++ GTS L+ L A +++I + + + Sbjct: 62 LILPLAFFLGILLALGQLYLNSEITVLVACGTSPNRLLWVSLLPATVVAILVGLCSLWLT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI---VDSR 179 P + + + L F L F + R Sbjct: 122 PAGALQNEIILDEQSSQLDFGVLAPGRFQNFGGGRVAYTEALSEQERRLEGVFISERQRR 181 Query: 180 DTQTHKIYYAQSGSIDL------DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 D T + ++ + ++L+DGE + P + F +Y ++ A Sbjct: 182 DDGTPQTVVTRAAEGYQTIDEETGSRFLVLSDGERYSVEPGRAVAEHLSFGTYAVRLSRA 241 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + L + + L + + P ++ RL I L+++ Sbjct: 242 AAERDDLDDPEYATTPALFADGSAPA---------MAQLQWRLGLPPMVFILTLLAMPL- 291 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFLL 352 + ++ + + ++ + + I + + + ++ I LL Sbjct: 292 --SRVNPRQGRFAKLLPAIFLYVAYLSLLLAALDAIARGAWPTTLGMWPIHAAFLVIGLL 349 Query: 353 MIKKKYTK 360 M + K Sbjct: 350 MTLRAQRK 357 >gi|269103492|ref|ZP_06156189.1| putative permease [Photobacterium damselae subsp. damselae CIP 102761] gi|268163390|gb|EEZ41886.1| putative permease [Photobacterium damselae subsp. damselae CIP 102761] Length = 366 Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 40/356 (11%), Positives = 111/356 (31%), Gaps = 21/356 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R +S + + + ++ + + + +++ + G +P++ Sbjct: 2 IIVRYLTRETLKSQFAVLFVLFLVFISQKFIRILADATDGSIPSDLITTLMGLYMPSMAL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG L++ L LA++ + + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGMGNKFLLRAALSLALITGALATFNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P Q+ + L + F + + + + ++ Sbjct: 122 PWAAEKEAQVMESVKADSGLDLLVKGQFQAAPNGQGVVFVNDITDKGKTLKHVFVAQLKG 181 Query: 183 ----THKIYYAQSGSIDLDRQAII---LNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + A G + + L DG + P D SI F+ Y Sbjct: 182 KDSIRPSVLVADHGYVSEHKDGRQILDLKDGTRYEGIPTRLDYSITDFEGYQAVIGQRKV 241 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + L+ ++EF R++ + L+++V Sbjct: 242 KEERRDWDAMPTLELM----------QRAEPEAQAEFQWRMSL---ILCIPLLTMVVVPL 288 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 A+ ++ + + ++ I F S ++ P++ L+ + + + Sbjct: 289 SAVNPRQGRFAKLVPAVLIYLAYFLAIS-AGKSALEDGTLPPMIGLWSINLVILLI 343 >gi|119357818|ref|YP_912462.1| permease YjgP/YjgQ family protein [Chlorobium phaeobacteroides DSM 266] gi|119355167|gb|ABL66038.1| permease YjgP/YjgQ family protein [Chlorobium phaeobacteroides DSM 266] Length = 358 Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 48/359 (13%), Positives = 115/359 (32%), Gaps = 6/359 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI R SF + + + +I +++ ++ + IP+ Sbjct: 1 MKLLDRYIFRQFAVSFFFASAAFIALFILISMVENLDEFIDLGIGPGKITGYYLSSIPST 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + +P + V ++ +EL I + G S L+KP + ++ ++ Sbjct: 61 LMVTSPVAALLSAILVAGKLSAMSELSAIKSAGISLKQLLKPFVLGGTIICSINMLNSCW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF-IVDSR 179 + P + + N+ + + I + N + I Sbjct: 121 LGPAAAADKIAFERTSFNRTQNLQANSNMHILESGNRIVSIGELLINQSKGLHISIEQFN 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDIS-IMKFKSYTLQTESANSSTI 238 T+ A D + +L + + ++ + + + + Sbjct: 181 GTRLSTRMDAPEMIFDQNVHKWVLKETSSRSFTGNNEQYHLNPGNDTLGMAMSLKSLRKL 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 ++ ++ N+ L+ + + H ++ +I LI + + Sbjct: 241 NVQPDEMNILEHYRYTREKDKAGFSGLDRAKVKLHAKIALPFASLISILIGVPL---STI 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 ++ K I+L I F ++ G I I P + +L + + + I K Sbjct: 298 RKRGGKAAEFSITLFIGF-LYLGLQKTIATIGYTGLLEPWIAAWLPNMLFLIVAGILYK 355 >gi|294084200|ref|YP_003550958.1| hypothetical protein SAR116_0631 [Candidatus Puniceispirillum marinum IMCC1322] gi|292663773|gb|ADE38874.1| hypothetical membrane spanning protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 364 Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 62/355 (17%), Positives = 136/355 (38%), Gaps = 3/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 F +YI + R+ + + ++ I W+ Q ++ + LV + + L +S +IP L + Sbjct: 3 FNIYIFNQLFRATCVISMVLIGIMWLFQTIKLLELVVNKGAPIFDFLLMSITVIPLWLTI 62 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + V + + EL ++ G S L K + L +LL+ L+ + + P Sbjct: 63 ALPIAGFVAVNWVFHRILADRELTVMQAVGLSPAQLAKAPIALGMLLTSVLYFNSVYLLP 122 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 K L + + L++ +F + L + I N+ + +FI D+R Sbjct: 123 TSFGIYKDLQFNLRNGIPVILLQDGVFTEVVPGLTMFIGSREENDVVSDVFIQDTRTIDK 182 Query: 184 HKIYYAQSGSIDLDRQAI--ILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 I A++G IL +G+ + + +++ F++++L + Sbjct: 183 TIILTAENGKFVGKDYHPTLILGNGQRLEVNSDGESGALLLFETHSLSLVTNEKKPSERI 242 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 AND N + N + + +E H R+ + + ++ I L R+ Sbjct: 243 ANDMNEDSISNLLDAKKSPYADYAFQRIAEGHYRIASPVLALALIMMVIAITLHGQL-RR 301 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + I++S G+ P+ ++++ I + + + Sbjct: 302 DLWLRRSLINISCCLGLIVALILARSWTITMPHLWILIHIVTTLPILICGIALAR 356 >gi|148239646|ref|YP_001225033.1| permease [Synechococcus sp. WH 7803] gi|147848185|emb|CAK23736.1| Predicted permease [Synechococcus sp. WH 7803] Length = 388 Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 48/375 (12%), Positives = 132/375 (35%), Gaps = 21/375 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQ-ILQRINLVSSSTESLNILLKISGYLIPTVL 61 + +++ + L + ++ + + + + + S + I +++ +P+ L Sbjct: 18 LLDRWLIGELLSPLLFAIAAFTVVSLSVGVMFELVRQIVESGLPVAIAVQVLLLRLPSFL 77 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + M T + ++ N+EL + + G + +I P L +A+L+S F+ +++ Sbjct: 78 VISFAMATLMATLLAYSRLSANSELTALRSVGVTATRMIVPALIVALLMSGLTFVFNDVV 137 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI------------KISKYNPNNT 169 P+ + + +A + N+ + + ++ + Sbjct: 138 VPRANRSAEITLRRALGKAIATEKGSNIVYSRFGRIQDPDGSSSKGLAQLFYARQFKDGV 197 Query: 170 LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ 229 + G+ ++D ++ A + + DG++ +P S F Y Sbjct: 198 MSGVTVLDFTRAGFTQMLVADRAVWNERQAKWQFFDGQILTLTPSGSTTS-ADFDQYLYP 256 Query: 230 TESANSS--TIVLKANDQNLSFLLNPNPNNPNYRP-ELLETYRSEFHKRLTQWLFPVIFG 286 +A + AN+ ++ L + + ++ T + ++FG Sbjct: 257 LSAAPIRIAQLPKDANNMTVAEALRARELLEQAGDIKEARRLQVRIQEKFTLPMACLVFG 316 Query: 287 LISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF-LFC 345 LI K + + IS+ + V++ S+ + P+L + Sbjct: 317 LIGASLGAKP--NSRTSRSQGFGISVVL-ILVYYVLSFSFSSLGVKGTLPPLLAAWSPVL 373 Query: 346 ISSIFLLMIKKKYTK 360 IS + ++ ++ Sbjct: 374 ISLAGGGWLLRQASR 388 >gi|104783410|ref|YP_609908.1| hypothetical protein PSEEN4441 [Pseudomonas entomophila L48] gi|95112397|emb|CAK17124.1| conserved hypothetical protein, putative membrane protein [Pseudomonas entomophila L48] Length = 353 Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 44/357 (12%), Positives = 114/357 (31%), Gaps = 6/357 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + + L I+ +A + + ++ + S T ++ P Sbjct: 1 MVKLDRYIGQSVLLAILAVLGIILGLASLFAFIDEMSDL-SDTYTVMDAGSFVLLTAPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L S+ ++EL I+ G S ++ V+ ++L + + Sbjct: 60 LYDMLPMAALIGCLIGLGSLASSSELTIMRAAGVSIGRIVWAVMKPMLVLMLVGLLIGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + AQ + ++ R ++ S L Sbjct: 120 VAPVTENKAQADRSLAQGGGEAQSSKRGMWHRQGEEFVHINSVQPNGLLLGVTRYRFDEQ 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + +A+ + +LND ++ + + + +T+VL Sbjct: 180 RKIQTSSFARKAQYHEGK--WVLNDVATTYFRGDHTEVVKAPEEVWDVSVTPELLNTVVL 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 +++ L + + + Y F ++ Q L++I R Sbjct: 238 APESLSITGL-WDYIHYLSDQGLNNSRYWLAFWTKVLQPAVTAALVLMAISFIFGPL--R 294 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 +F + + F + + + + + I ++ L + ++ Sbjct: 295 SVTLGQRVFTGVLVGFVFRIAGDLLGPSSQVFGFPPLLAVVIPAGICALAGLWLMRR 351 >gi|119476403|ref|ZP_01616754.1| predicted Permease [marine gamma proteobacterium HTCC2143] gi|119450267|gb|EAW31502.1| predicted Permease [marine gamma proteobacterium HTCC2143] Length = 374 Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 52/371 (14%), Positives = 122/371 (32%), Gaps = 26/371 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + I S ++ I + ++ + ++ S +ILL I Y +P+ L Sbjct: 2 ILFRYLAKEILISLFAVSATLLVIVMSGRFVKYLAQAAAGKLSPDILLNIMVYRLPSFLE 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + M +E+ ++ G S L L +I +++ + Sbjct: 62 LVLPLSLFIAILLAYGRMYVESEMTVMAACGLSDRRLAVYTLVPSICVAVVVGYLSLYAS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD-- 180 P ++++ Q + L E F + + + N+ + + Sbjct: 122 PIGIGKVQEIFEDTQNSSGLELLIEGRFRVDEQSGRVTYVESLDNDVGIMQDVFSAEQSL 181 Query: 181 ----TQTHKIYYAQSGSIDLDRQAI----ILNDGEVHRKSPISKDISIMKFKSY-TLQTE 231 + + +A+ G+I + +L +G P I +F Y L + Sbjct: 182 GSEGEEQLTVIFAEQGNIQMSDDQQSRYLVLRNGYQSVGQPGGLRYRISQFDEYGQLVRD 241 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 A T+ +A+ + LLN L ++ R++ + + LI+ Sbjct: 242 PAVQKTLYKRADARTTEQLLN----------STLLEDKATLQWRMSLVILVPVIALIAQA 291 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY--IPILYLFLFCISSI 349 +R + + + I + I + + + ++ L + Sbjct: 292 L---SRTSHRRGRYVKMLPAFIIYITYLVALNAARDAIGKEKISSDLGMWWVHLVFLGLG 348 Query: 350 FLLMIKKKYTK 360 L+ + + Sbjct: 349 ITLLFGGDWLR 359 >gi|260655096|ref|ZP_05860584.1| putative membrane protein [Jonquetella anthropi E3_33 E1] gi|260630207|gb|EEX48401.1| putative membrane protein [Jonquetella anthropi E3_33 E1] Length = 339 Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 51/340 (15%), Positives = 119/340 (35%), Gaps = 10/340 (2%) Query: 22 FIVFIAWVIQIL-QRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSM 80 I +L + +L+ SL + ++ Y +P V+ + P + +M Sbjct: 2 AFSLIMVAGGLLFKLADLIIERGVSLAVAGRLFVYELPGVVVLTLPMSCLLGALLGFGAM 61 Query: 81 NRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLAL 140 + N+E++ + +G S + PV+F A+++SI I + P + + + Sbjct: 62 STNSEVVALKASGISFWRMNWPVIFWAVIISILSLILNETLVPLGQRAAENVMTFEVAKQ 121 Query: 141 TFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQA 200 +++ +F + + + K +P++ IV + + Sbjct: 122 KPVLIKQEVFLQAPGGRVVYVGKLDPSSGSMSNVIVQELASGKLTRITVAPNGQWVSG-I 180 Query: 201 IILNDGEVHRKSPISKDISIMKF--KSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNP 258 L DG+V+ + F + + + +K +D + S L Sbjct: 181 WYLTDGDVYEMKEPDGVAHLFHFAKQELPISLTPRQIANTSVKPDDLSASDLYR-YIAAM 239 Query: 259 NYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGV 318 + + + +FH +L VI LI + R + S+ I F + Sbjct: 240 KMQGKDISALWVKFHFKLAVPWACVILSLIGTSLGV--SHQRHGNRSVGFGQSILIVF-L 296 Query: 319 FWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMIKK 356 ++ + + Q P++ +L + +I++ Sbjct: 297 YYVLMSVGKSLGQTNALPPVVAGWLPNIIFLVAAVFLIRR 336 >gi|257468007|ref|ZP_05632103.1| hypothetical protein FulcA4_01647 [Fusobacterium ulcerans ATCC 49185] gi|317062293|ref|ZP_07926778.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185] gi|313687969|gb|EFS24804.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185] Length = 358 Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 49/359 (13%), Positives = 124/359 (34%), Gaps = 7/359 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YIL + L FI + I+ + + S+ +++I + +P + Sbjct: 1 MKIIEKYILEEVKMPILFGISLFTFIFLIDIIVAMMENIIVKGISIIDIMRILSFYLPPI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + + R +E + + G ++KP+ LA ++F+F + Sbjct: 61 LSQTIPMGIFLGVMLTFSKFTRTSEATAMSSIGMDLRGIVKPIFILACATTLFIFFLQES 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P+ S ++ ++ K L+E F ++ + I + + + ++ ++ Sbjct: 121 IIPRSFSKLQYITTKIAYENPVFQLKEKTFIDEVEEYNLYIDRIEGKDRVAQGVLIFQKN 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSSTI 238 ++++ D + + K+ +F + ++ Sbjct: 181 EDVEFPTVLVGKEAYWKDSSMVITDSKFYDFDKDGKEKLRGEFDDKKVPLDAYFDGIDIK 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 V ++S LL + P Y+ E +++L L ++ L+ + + Sbjct: 241 VKDIEAMSISMLLKEMKDLPQNEKIP---YKVEINRKLALPLSTIMLSLLGVFISIGHHR 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + + + ++ + P+ ++ + + KKK Sbjct: 298 SGKGANFALSLVVIFSYITFLNIGMVMANRGKIPPFV--GVWTPNIILFLVTFYFYKKK 354 >gi|257466753|ref|ZP_05631064.1| hypothetical protein FgonA2_04885 [Fusobacterium gonidiaformans ATCC 25563] Length = 361 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 51/363 (14%), Positives = 122/363 (33%), Gaps = 12/363 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK ++Y+ + + F S + I + Q+ + + V+ S + G L+P + Sbjct: 1 MKKLDIYMTKNFLKYFSYSLFSFLGIFVLSQVFKVLRYVNEGQLSPGQIPLFIGNLLPGI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + + M N E++ + +G L++ +F++ L+S+ +F + Sbjct: 61 IINVAPLAVLLGGLISINIMASNLEIISLKTSGIRFARLVRGPIFMSFLISLIVFYLNDR 120 Query: 121 -IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV--- 176 + + +EN FFR + Y+ K T + Sbjct: 121 VYPGSVVRNRELRGKEDVEEREVPKEKENAFFRNVEGRYVYYMKKINRETGIMDHVEVLD 180 Query: 177 -DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + ++ A+ G D R+ + D ++ + + + + Sbjct: 181 MSENFDKIERMITAKKGRYDFKRKLWVFEDAHIYYPDTDTVEARAFIQEQKYMDEPEYFI 240 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 S + + ++ L + + SE KR + + + + Sbjct: 241 SLSNIIPKQKTIAEL-KKAIKEGSATGNEIREILSELGKRYSFPFASFVVSFLGLAL--- 296 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLM 353 + + I I IS+ + + + + N Y P L ++ + L Sbjct: 297 GSHYVRGMSILNIVISILLGYAYYLV-EGAFEALGMNGYLNPFLSGWIPNLLFLAAGLYF 355 Query: 354 IKK 356 +++ Sbjct: 356 MRR 358 >gi|298369120|ref|ZP_06980438.1| permease, YjgP/YjgQ family [Neisseria sp. oral taxon 014 str. F0314] gi|298283123|gb|EFI24610.1| permease, YjgP/YjgQ family [Neisseria sp. oral taxon 014 str. F0314] Length = 356 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 41/360 (11%), Positives = 123/360 (34%), Gaps = 4/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YI+R + + + L + + +++ + V + + +++ +P Sbjct: 1 MKLIPRYIIRQMSVMAVYALLAFLALYSFFEVINEMGDVGKGSYTGAKMVQYVLMQMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + +EL +I +G S L+ + ++ ++ + Sbjct: 61 AYELMPLGVLIGGLIALSQLASGSELTVIKASGMSTKRLLAVLSQFGLIFALATVVLGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A A + + + + + I + + P++TL G+ I D Sbjct: 121 VAPDLSRRAENMKASAINGRISA--GASGLWMKEQNNIINVREMLPDHTLLGVKIWQHDD 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + L + +S + + + +S +++ Sbjct: 179 RYQLASAAEAESAALNPDGSWQLKNVSRSVLKGEQVAVSSESSQRWPVALQSGLLDVLLV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + ++S L + + +TY + ++L + + L++ + Sbjct: 239 DPDQMSVSELT-TYIAHLKSNHQKTDTYSVAWWRKLMYPIAAWVMALVAFAFTPQTTRHG 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 I L + F ++ P ++ + L + + + +I+++ + Sbjct: 298 NMGLKLFGGICLGLVFHFAGRLFGFTSQLYSVPPFLAGM-LPTVIFALLAVYLIRRQERR 356 >gi|262376976|ref|ZP_06070202.1| permease YjgP/YjgQ family protein [Acinetobacter lwoffii SH145] gi|262308014|gb|EEY89151.1| permease YjgP/YjgQ family protein [Acinetobacter lwoffii SH145] Length = 366 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 50/361 (13%), Positives = 119/361 (32%), Gaps = 17/361 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + + L+ + I ++++ + + IL I GY +P L Sbjct: 2 IIRRYLVKQVVSTSLVVIALLTLIMMGGRLIKYFGVAAQGRLDAGILFSIIGYRLPEFLT 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + V + + E+ +++ +G SR L + ++ + ++ I Sbjct: 62 LILPLGFFIGLMLVFGRLYVDHEMAVMNGSGVSRHQLARLLVPMTLVFLIAQAGLMLWAA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + L+ + F + F L+ IF + + Sbjct: 122 PWGIRQFEALTTSQAVRTGFDLVRPKEFISSGPYTIYAGDLSEDRKNLKDIFFYQRAEKE 181 Query: 183 THKIYYAQSGSIDLDR------QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + L +G + P + + +F+SY L+ ES + Sbjct: 182 GKPDVMILAQEATRIEVPNDAANVVDLVNGRRYEIYPGTPQYTQAEFESYRLRLESDEEA 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + L N +P E R+ +I ++++ Sbjct: 242 QFASTEVEALPTSQLWQNRQDPVVAS--------ELGWRVFVPFAILIALILAVAL---S 290 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + ++ + +F +L I + + +I + I L L + L +K Sbjct: 291 EVSPRQGRYLKLFPALMIFASLIVALMAVKTRISKEEMGIWAYPLILIAYAIAGALFSRK 350 Query: 357 K 357 + Sbjct: 351 Q 351 >gi|260062387|ref|YP_003195467.1| hypothetical protein RB2501_12362 [Robiginitalea biformata HTCC2501] gi|88783950|gb|EAR15121.1| hypothetical protein RB2501_12362 [Robiginitalea biformata HTCC2501] Length = 360 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 54/360 (15%), Positives = 128/360 (35%), Gaps = 8/360 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + YIL+ +F + L V I ++ + ++I + + L +L G + Sbjct: 2 LTIIDRYILKKYLSTFGLMLLLFVPIGIMLNLAEQIGKMIDNEAPLVEILIYYGNFTIYI 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + + M NTE++ I ++G S ++P A ++++ +F+ Sbjct: 62 GSLLFPIFLFLSIIFFTSKMANNTEIVAILSSGVSFGRFLRPYWIGASIIAVLMFLMGMF 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + K + + N+F +L + YI +S ++P + F + Sbjct: 122 IVPSASKGFNEFKFKYLKKGSKDRVTSNIFNQLGESDYIYVSSFDPARQIGYNFTYEHFG 181 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 Y S +I + L ++ + + + + + + Sbjct: 182 EDGELEYKISSANIRWLEEDSLYRLTSYTRRNLRGDTEIVETRRRLDTLFAFQIDDLTPV 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 A +NL L + + TY +KR + + +I + ++ Sbjct: 242 SYIAETKNLFELNQFIADQRRKGASNVNTYVMVKYKRWALPVTAFVLTIIGVAV---SSI 298 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY--LFLFCISSIFLLMIKK 356 R+ + + ++F + EQ+ + P+L + + M++K Sbjct: 299 KRRGGMGVNLAFGIGVAFIYIFMDKVFGTLAEQSG-FPPLLAVGIPNIFFLVLGYFMLQK 357 >gi|240079726|ref|ZP_04724269.1| hypothetical protein NgonF_00194 [Neisseria gonorrhoeae FA19] gi|268595872|ref|ZP_06130039.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|293399674|ref|ZP_06643826.1| hypothetical protein NGNG_01869 [Neisseria gonorrhoeae F62] gi|268549660|gb|EEZ44679.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|291609925|gb|EFF39048.1| hypothetical protein NGNG_01869 [Neisseria gonorrhoeae F62] Length = 356 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 43/360 (11%), Positives = 116/360 (32%), Gaps = 4/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +IL + + + +L + +P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGKGSYGIWEMLGYTALKMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + +EL +I +G S L+ + + +I Sbjct: 61 AYELMPLAVLIGGLASLSQLAAGSELAVIKASGMSTKKLLLILSQFGFIFAIAAVALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A A + + + + I + P++TL GI I D Sbjct: 121 VAPTLSQKAENIKAAAINGKISTGN--TGLWLKEKNSIINVRGMLPDHTLLGIKIWARND 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ + L + + S +++ + +++ Sbjct: 179 KNELAEAVEADSAVLNSDGSWQLKNIRRSIMGTDKIETSAAAEETWPIAVRRNLMDVLLV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K + ++ L + + + Y + ++L + + L++ + Sbjct: 239 KPDQMSVGELT-TYIRHLQNNSQNTQIYAIAWWRKLVYPVAAWVMALVAFAFTPQTTRHG 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 I L + F + ++ P ++ L + + + +I+K+ + Sbjct: 298 NMGLKLFGGICLGLLFHLAGRLFGFTSQLYGTPPFLAG-ALPTIAFALLAVWLIRKQEKR 356 >gi|255531333|ref|YP_003091705.1| permease YjgP/YjgQ family protein [Pedobacter heparinus DSM 2366] gi|255344317|gb|ACU03643.1| permease YjgP/YjgQ family protein [Pedobacter heparinus DSM 2366] Length = 367 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 47/362 (12%), Positives = 104/362 (28%), Gaps = 6/362 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILL-KISGYLIPTV 60 K + YI+ +FL + V I + + ++++ S+ + ++ IP Sbjct: 9 KILDWYIISKYLGTFLYTLTLFVVIIIIFDLSEKLDDFLSANLTFWQVISLYYAGSIPYY 68 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M++P + M TE++ I + G S + P A ++ S Sbjct: 69 VNMLSPLINFIAVIFFTAKMADQTEIVPILSGGVSFNRFLLPYFVSAFVIFAVNLASNLY 128 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P S D+ + N + T + + + Sbjct: 129 ILPYTNQLKNTFENTYVKKNDPSSKSNIHMKLDDNTYIFMDNFDNKSKTGTKFSLDNFKG 188 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK--FKSYTLQTESANSSTI 238 K A D +++ L + + + + + K L + S Sbjct: 189 DVLTKKLIADEIKWDSLKRSWKLTNYSIRYVNGLKETFVSGTSLTKDTVLDMRPDDFSAY 248 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + + L + E +KR L + LI + + Sbjct: 249 DNVFENLSNKELSEKIRKERIRGSGIWNDLLFEQYKRYLHPLSAFVLTLIGVAL---SSR 305 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + P+ I + +SF + + + + + + +K Sbjct: 306 KVRGGVGLPLGIGILLSFAYIVFNQFAKMFSLKGGMPPLLAVIAPTLFFGLLGFYLLRKA 365 Query: 359 TK 360 K Sbjct: 366 PK 367 >gi|114319721|ref|YP_741404.1| permease YjgP/YjgQ family protein [Alkalilimnicola ehrlichii MLHE-1] gi|114226115|gb|ABI55914.1| permease YjgP/YjgQ family protein [Alkalilimnicola ehrlichii MLHE-1] Length = 360 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 45/359 (12%), Positives = 111/359 (30%), Gaps = 5/359 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + Y++ + S L++ + I+ + V + + ++ L P+ Sbjct: 3 RLLDRYLIITVVASALVALVVIMSLDLVFSFVDEGGDIGTADYGPLSALAYVLLSSPSRA 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PF + L ++ EL ++ G S + + + V ++L++ + Sbjct: 63 YEAFPFATLIGALMGLGALAARNELTVMRAAGVSVLQIARAVAAGGLVLALIAMAMGEWV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P +L A A L+ R +P + Sbjct: 123 VPPAERAATELRASAMARDVGISGAGGLWARDGGQFIEVRRARSPAHLEGLTIYHFEERD 182 Query: 182 QTH---KIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + S ++ D + I+ GEVH + + K + A + Sbjct: 183 GEPMTLRRVLSGSEALFRDGRWILREPGEVHLHADGISVADLGDEKVWESALSPAVLDVV 242 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 V+ +++ L +R F ++ + + L++I Sbjct: 243 VVDPESLSMADL-RTYIGYLEANELDSGEWRLAFWVKVATPISTLAMLLLTIPLVFGAVR 301 Query: 299 VRQRKKIHPIFISLSISFGVFW-GFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + I + + ++F + ++ P +L F F + I ++ + Sbjct: 302 STGAGQRIFIGVLIGVAFFLVNRMLNHAGVVFGLPPSASALLPAFAFLAAGILGILKVR 360 >gi|325278209|ref|ZP_08143702.1| permease YjgP/YjgQ family protein [Pseudomonas sp. TJI-51] gi|324096649|gb|EGB95002.1| permease YjgP/YjgQ family protein [Pseudomonas sp. TJI-51] Length = 371 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 45/353 (12%), Positives = 116/353 (32%), Gaps = 26/353 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + + ++ I + ++ + + +L I G+ +P L Sbjct: 2 IVFRYLSREVLVTLSAVSAVLLVIIMSGRFIKYLAQAAQGVLDPGVLFLIMGFRLPGFLQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ TG S+ L+ + A L+++ + + Sbjct: 62 LILPLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLLGMTMAPAALVALLVAWLSLSLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFR--LDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + ++Q+ A+ F L F + + L G+FI + R Sbjct: 122 PLGVAQVQQIIAQQDTLTEFDTLVPGRFQMLRDGSRVTYTEQLSDDRVKLGGVFISEKRF 181 Query: 181 TQTHKIYYAQSGSIDLDRQAII---------LNDGEVHRKSPISKDISIMKFKSYTLQTE 231 Q A S + I L +G + +P D +K+ +Y + Sbjct: 182 NQDKTKDRAPSVLVAEKGHQEIQADGNRYLVLENGYRYDGNPGQADYRAIKYDTYGVLLP 241 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 + V + L + R+E RL+ + + L+++ Sbjct: 242 KPEVAEEVTEREAIPTLDLF----------GKTDLRERAELQWRLSLPILVFVVTLLAVP 291 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLF 342 + ++ + + ++ + + + + P + + ++ Sbjct: 292 L---SRVNPRQGRFLKLLPAILLYMAYLTMLISVRGALEKGKLPIALGMWWVH 341 >gi|297537469|ref|YP_003673238.1| permease [Methylotenera sp. 301] gi|297256816|gb|ADI28661.1| permease YjgP/YjgQ family protein [Methylotenera sp. 301] Length = 356 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 48/360 (13%), Positives = 123/360 (34%), Gaps = 8/360 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+L+ I + LM L ++ + ++Q ++ + + L +L P Sbjct: 1 MKILNKYLLKEIVSNVLMVMLALIAMFSFFDLIQELDALGKGSYGLGKILLFVLLSAPGH 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + L + R +EL+++ +G S + +L + + +I F+ + Sbjct: 61 VYDVMPVAVLVGCMYSLGQLARYSELVVLRVSGLSIFDIAVLLLKIGAIFTIITFLIGEL 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P T +++ KA ++ L+ + + L ++ Sbjct: 121 VTPFSEKTAQRMRIKATDSVVAQEFRSGLWVKDGNSFINVEEVLPDATLLNIHIFDFDKN 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + A++G + + L D S +S ++ + +++ Sbjct: 181 AKLISTRNAKAGEFKHE--SWKLKDVTDTSFDKDSVKVSQSLEATWHSLIRPELLNVLLI 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + L N+ + + Y ++ L ++ ++++ R Sbjct: 239 MPEKMSAWNLY-TYINHLSINKQKTTRYEVALWAKMIYPLACMVMVVLALPFGFV--QQR 295 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQN---PYYIPILYLFLFCISSIFLLMIKKK 357 IF+ + + H N P + I+ +F ++ + +L ++ Sbjct: 296 AAGASTKIFVGIMLGVMYQILNRVFAHLGLLNDWPPLFSAIMPTIMFLMAGVAMLFYVER 355 >gi|150005671|ref|YP_001300415.1| hypothetical protein BVU_3161 [Bacteroides vulgatus ATCC 8482] gi|212693333|ref|ZP_03301461.1| hypothetical protein BACDOR_02845 [Bacteroides dorei DSM 17855] gi|254884104|ref|ZP_05256814.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|265753721|ref|ZP_06089076.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|294776587|ref|ZP_06742057.1| putative membrane protein [Bacteroides vulgatus PC510] gi|319640869|ref|ZP_07995580.1| hypothetical protein HMPREF9011_01177 [Bacteroides sp. 3_1_40A] gi|149934095|gb|ABR40793.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482] gi|212664098|gb|EEB24670.1| hypothetical protein BACDOR_02845 [Bacteroides dorei DSM 17855] gi|254836897|gb|EET17206.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|263235435|gb|EEZ20959.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|294449575|gb|EFG18105.1| putative membrane protein [Bacteroides vulgatus PC510] gi|317387506|gb|EFV68374.1| hypothetical protein HMPREF9011_01177 [Bacteroides sp. 3_1_40A] Length = 390 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 51/362 (14%), Positives = 126/362 (34%), Gaps = 7/362 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPTV 60 K ++YI++ ++ + I+ IA V + + I+ ++ L I+ IP Sbjct: 33 KRLDIYIIKKFLGTYFFAIALIISIAVVFDVNENIDRFINNKAPLKAIVFDYYMNFIPYF 92 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +P + + + N+E++ + +TG S +++P + A ++S+ F Sbjct: 93 SNLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMMRPYMISAAIISVVTFGLGAY 152 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + PK T + + Y+ + N N T + D Sbjct: 153 VIPKGNVTRLDFEDRYKKKKKQEYVRNVQLEVDSGVIAYIERYENYNKTGYRFSLDKFDD 212 Query: 181 TQTHKIYYAQSGSIDLDR-QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + A+S + D + + + + + I+ ++ E + + Sbjct: 213 KKLVAHLTARSVTYDTASVHKWTIKNYMIREMEGMREKITRGDRLDTIIKMEPQDFLIMK 272 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + L ++ + E+++R+ I I + + Sbjct: 273 GQQQTMTSPELKEYIDKQKRRGFANIKEFEIEYYQRIAMSFAAFILTTIGVSL---SSRK 329 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL-LMIKKKY 358 + + + L++SF + F + N PI+ +++ I F+ + + +K Sbjct: 330 MKGGMGLHLGVGLALSFS-YILFQTVSATFAVNGNTPPIIAVWIPNILYTFIAIYLYRKA 388 Query: 359 TK 360 K Sbjct: 389 PK 390 >gi|148265755|ref|YP_001232461.1| permease YjgP/YjgQ family protein [Geobacter uraniireducens Rf4] gi|146399255|gb|ABQ27888.1| permease YjgP/YjgQ family protein [Geobacter uraniireducens Rf4] Length = 359 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 60/360 (16%), Positives = 117/360 (32%), Gaps = 8/360 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK F YI + + + I V+ L++I + + + +P + Sbjct: 1 MKIFSRYIATAYAKMLGLCLGAFIAIYLVVDFLEKIGRFARANAEWKFIALFFLTRVPEI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M T L ++ N+EL + G S + P+ +A +S+ Sbjct: 61 ICQTASMAVLMATLLTLGMLSLNSELTAMRGCGLSLARITAPIFAIAFAVSLSTLFVSEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+C + + + + S D+ YI ++ T I + Sbjct: 121 VMPRCNTQGQYIREVLIDKKSPSTFFRQQNIWHKDENYILKARLFDPATGNLKGITLWKT 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKS--YTLQTESANSSTI 238 + + R L V R+ IS F + L ++A+ + Sbjct: 181 GTEMEPQQRIEATQGELRGNDWLFRDVVIREMAGGNIISTKSFPALLVKLNLKAADLKVV 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 +++ + L++ + + ++ H R++ PVI I I A + Sbjct: 241 GKFSDNMGIRELIS-YCDKLRKGGYDPTRFLAQMHSRISLSFAPVIMAFIGIPFAMRGG- 298 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF--LFCISSIFLLMIKK 356 R I SL I F F S I+ Q P++ + I + K Sbjct: 299 -RSSGIALGIGTSLGIGFAYFIINSVILS-FGQAGVLPPLVSAWATNLIFIMIGIWFGMK 356 >gi|59801588|ref|YP_208300.1| hypothetical protein NGO1229 [Neisseria gonorrhoeae FA 1090] gi|59718483|gb|AAW89888.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090] Length = 356 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 43/360 (11%), Positives = 115/360 (31%), Gaps = 4/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +IL + + + +L + +P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGKGSYGIWEMLGYTALKMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + +EL +I +G S L+ + + +I Sbjct: 61 AYELMPLAVLIGGLASLSQLAAGSELAVIKASGMSTKKLLLILSQFGFIFAIAAVALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A A + + + I + P++TL GI I D Sbjct: 121 VAPTLSQKAENIKAAAINGKISTGN--TGLWLKEKTSIINVRGMLPDHTLLGIKIWARND 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ + L + + S +++ + +++ Sbjct: 179 KNELAEAVEADSAVLNSDGSWQLKNIRRSIMGTDKIETSAAAEETWPIAVRRNLMDVLLV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K + ++ L + + + Y + ++L + + L++ + Sbjct: 239 KPDQMSVGELT-TYIRHLQNNSQNTQIYAIAWWRKLVYPVAAWVMALVAFAFTPQTTRHG 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 I L + F + ++ P ++ L + + + +I+K+ + Sbjct: 298 NMGLKLFGGICLGLLFHLAGRLFGFTSQLYGTPPFLAG-ALPTIAFALLAVWLIRKQEKR 356 >gi|304413751|ref|ZP_07395195.1| inner membrane component LptG of LptABCFG lipopolysaccharide transporter [Candidatus Regiella insecticola LSR1] gi|304283842|gb|EFL92236.1| inner membrane component LptG of LptABCFG lipopolysaccharide transporter [Candidatus Regiella insecticola LSR1] Length = 358 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 46/354 (12%), Positives = 119/354 (33%), Gaps = 2/354 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI R I + LM+ +V ++ +I+ ++++ + + S+ + +P + + Sbjct: 7 LDRYIGRNILHTILMTLFMLVSLSGIIKFIEQLRKLGEGSYSVLGAGIYTLLSVPKDIEI 66 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L ++ +EL+++ +G +R + V+ AI L + + + P Sbjct: 67 FFPMAALLGVLFGLGTLASRSELIVMQASGFTRTQIASAVMKTAIPLVLLTMVIGEWVAP 126 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 I + ++ + D + ++ I+ +NTL G+ I Sbjct: 127 -LSERIASDYRTKMIFGGAILTTQSGLWARDGENFLYINHILNDNTLSGVNIYHIDQENR 185 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 + + D + E + S + + + + + Sbjct: 186 LLSVRYAATATFKDNVWQLSQVDESDLSDAKKINGSKTLTGEWKINLTPDKLGIVSVDPD 245 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 +S L + Y+ ++ L + L+++ Sbjct: 246 SLPISGL-RDYIQYLKQNKQESLRYQLIMWNKIFSPLSVAVMMLVALSFIFGPLRTVTMG 304 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + I++ F V + + + P I L L + + L++K++ Sbjct: 305 VRVMVGIAVGFLFYVLNQIFGPVSLVYKMPPVIGALLPSLLFLLVSWYLLLKRR 358 >gi|318041350|ref|ZP_07973306.1| permease [Synechococcus sp. CB0101] Length = 388 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 43/365 (11%), Positives = 115/365 (31%), Gaps = 23/365 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQIL-QRINLVSSSTESLNILLKISGYLIPTVL 61 + ++ + L ++ + ++ + + V+ + + +++ G +P L Sbjct: 13 LMDRWLSSELLGPLLFGVAAFTAVSLSVGVVFELVRKVAEAGLPPLVAMQVLGLRLPGFL 72 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P M T + ++ ++EL + + G ++ P L +A L+++ F+ ++I Sbjct: 73 VLSFPMATLMATLLAFSRLSSSSELTALRSIGVPTWRMVVPALVVAALMTVLTFVFNDVI 132 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI----------------KISKYN 165 P A + +N+ + L S+ Sbjct: 133 VPSANLAAADTLDAALGRSVAAERGDNVVYSRYAQLTSIDEKGRERTGNDLAQLFYSRRF 192 Query: 166 PNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKS 225 + + ++D ++ A++G + R G + + + F Sbjct: 193 REGKMYEVTLLDFTKAGHQQLLIAKTGIWNDARSMWEFRAGRIVDIDSANNRTTSADFDR 252 Query: 226 YTLQTESANSS--TIVLKANDQNLSFLLNPNPNNPNY-RPELLETYRSEFHKRLTQWLFP 282 Y A + A ++ + R ++ Sbjct: 253 YFYPFTKAPLDVGKLPSDAAQMTVAQAWRAEALLEQAGDRKEARRLRVRIQEKFAFPAIC 312 Query: 283 VIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 ++FGLI + + + IS+ + FG ++ S+I + +P + Sbjct: 313 LVFGLIGSSLGVRPNA--RTSRSQGFGISVLLIFG-YYLMSFIFSSLGIKGTLLPFFAAW 369 Query: 343 LFCIS 347 + Sbjct: 370 MPVFI 374 >gi|261855830|ref|YP_003263113.1| permease YjgP/YjgQ family protein [Halothiobacillus neapolitanus c2] gi|261836299|gb|ACX96066.1| permease YjgP/YjgQ family protein [Halothiobacillus neapolitanus c2] Length = 376 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 50/366 (13%), Positives = 116/366 (31%), Gaps = 10/366 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + + Y++R I L S + V + + V +++ S L P Sbjct: 1 MGTLDRYLIRAIVVGGLASTAAFALLIVVFGAIDELPKV-NASYSAIDALSFVLMTTPGY 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + L ++ ++EL ++ +G S L +PVL A +L++ + Sbjct: 60 LYDFYPAAVLVGGLLSLGNLAAHSELTVMRCSGMSMFRLARPVLVGATILALIGMLMGET 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I + ++ A+AQ + ++ + D +I + + L + + Sbjct: 120 IGAWGQEKANEMRAEAQGSGVSMN-LKSGLWLRDGQRFINVGQAIVGGRLNRVRVFTVNA 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKS----PISKDISIMKFKSYTLQTESANSS 236 + S +I L D + S + + + + + Sbjct: 179 QSQPVQLLSASYAISEGGDLWRLYDVKESTLDTKVPGNSVKVRFVPVQEHVRLFSQKILN 238 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 VL N+ L + + Y S R+ + ++ +++ Sbjct: 239 IAVLNPRHMNILQL-HSYVDYLRKNQLDASAYSSALWARVFAPVSVLVMLFVALPFVFAP 297 Query: 297 ALVRQRKKIHPIFISLSISFG-VFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLM 353 + I I L + + + S +IP + + + + + Sbjct: 298 QRSGGAGRWLFIAIVLGVVYLTLVQIVSAFAPVYGVGHPFIPFMSAAVPPALFAMLGVYA 357 Query: 354 IKKKYT 359 ++ Y Sbjct: 358 FRRLYP 363 >gi|311694207|gb|ADP97080.1| permease YjgP/YjgQ family protein [marine bacterium HP15] Length = 369 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 50/375 (13%), Positives = 132/375 (35%), Gaps = 29/375 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y++R I S + ++ + + L+ ++ + + S +LL+I + P Sbjct: 1 MSIIFRYLIRQIMISMVAVSGILLLVFMSGRFLKYLDSAAQGSISAGVLLEIMAFRFPGF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + M +E+ ++ G S L+ L ++ + I + Sbjct: 61 LELILPLGLFIGILLAYGRMYLESEMTVLSACGVSDKALLGKTLLGSLPVMIIVGAMSLY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRL--DDDLYIKISKYNPNNTLQGIFIVDS 178 + P + ++++ + + A F L F + + LQG+FI + Sbjct: 121 VSPWGMNQVQEILNEQRKATEFEMLAPGRFQDFSSGGRVTYTEALSEDKRQLQGVFIAEY 180 Query: 179 RDTQTHKIYYAQS-----GSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 + + +IL +G + + +++ F++Y L+ E Sbjct: 181 APDGRGLTIITADSGSQLIDPETGSRFLILENGGRFEGAAGQLNYNVIDFEAYGLKIEGG 240 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + T + S + + + R+ H R + L I L+++ Sbjct: 241 EAGTKQREEGASTWSLMQSDRLED-----------RALLHWRFSLPLIVPIVTLLAVRL- 288 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH--KIEQNPYYIPILYLF-LFCISSIF 350 + ++ + + ++ + + P ++ +L++ LF ++ Sbjct: 289 --SRVNPRQGRFFHLLPAMLVYITYLGLLIVARDWLAAGKVPEWLGMLWVHALFLGFGLW 346 Query: 351 L-----LMIKKKYTK 360 L + +++ + Sbjct: 347 LQFGPAWLYRRRLIR 361 >gi|237723640|ref|ZP_04554121.1| conserved hypothetical protein [Bacteroides sp. D4] gi|229437988|gb|EEO48065.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] Length = 390 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 51/362 (14%), Positives = 126/362 (34%), Gaps = 7/362 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPTV 60 K ++YI++ ++ + I+ IA V + + I+ ++ L I+ IP Sbjct: 33 KRLDIYIIKKFLGTYFFAIALIISIAVVFDVNENIDRFINNKAPLKAIVFDYYMNFIPYF 92 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +P + + + N+E++ + +TG S +++P + A ++S+ F Sbjct: 93 SNLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMMRPYMISAAIISVVTFGLGAY 152 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + PK T + + Y+ + N N T + D Sbjct: 153 VIPKGNVTRLDFEDRYKKKKKQEYVRNVQLEVDSGVIAYIERYENYNKTGYRFSLDKFDD 212 Query: 181 TQTHKIYYAQSGSIDLDR-QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + A+S + D + + + + + I+ ++ E + + Sbjct: 213 KKLVAHLTARSVTYDTVSVHKWTIKNYMIREMEGMREKITRGDRLDTIIKMEPQDFLIMK 272 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + L ++ + E+++R+ I I + + Sbjct: 273 GQQQTMTSPELKEYIDKQKRRGFANIKEFEIEYYQRIAMSFAAFILTTIGVSL---SSRK 329 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL-LMIKKKY 358 + + + L++SF + F + N PI+ +++ I F+ + + +K Sbjct: 330 MKGGMGLHLGVGLALSFS-YILFQTVSATFAVNGNTPPIIAVWIPNILYTFIAIYLYRKA 388 Query: 359 TK 360 K Sbjct: 389 PK 390 >gi|163735796|ref|ZP_02143225.1| permease YjgP/YjgQ family, putative [Roseobacter litoralis Och 149] gi|161390882|gb|EDQ15222.1| permease YjgP/YjgQ family, putative [Roseobacter litoralis Och 149] Length = 365 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 43/359 (11%), Positives = 109/359 (30%), Gaps = 12/359 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 LY R +++ + + + ++ ++ + + S + ++ P + Sbjct: 2 ILHLYFARRFASWLMIAFIALFALIALVDLVDQTRRFADRGVSAAGIFELVILNTPQTIS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + T S+ R++EL+ +G S + + + + I+L + N I Sbjct: 62 QILPLIVLLATVAFFLSLARSSELIATRASGRSAMGALIAPVGVVIVLGTLATTTLNPIV 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-------LYIKISKYNPNNTLQGIFI 175 +LS + ++ L + S + + F+ Sbjct: 122 AATSKKYNELSQTYRTGGGSTFSISTEGLWLRQGTDDGQMVIRAWRSNPDASVLFDVTFL 181 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQ-AIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + +A S + + D + R + + + + Sbjct: 182 AYEVIGTPVRRIHADSAELKDGAWLLRNVKDWPLARGINSEGNATEHRSLTIPSSLTVER 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + ++ + N N +R L + LF V LI+ Sbjct: 242 IRESFGHPSTISIWEM-NDFIKQLNQAGFSSLQHRVWLQSELARPLFLVAMVLIASAF-- 298 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 R + ++ + F +++ S+ + +N L + I+S+ L Sbjct: 299 TMRHTRFGGTGVAVLAAVLLGFALYFVRSF-GLILGENGQLPVYLAAWAPPIASVLLAF 356 >gi|85859085|ref|YP_461287.1| permease [Syntrophus aciditrophicus SB] gi|85722176|gb|ABC77119.1| permease [Syntrophus aciditrophicus SB] Length = 359 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 126/357 (35%), Gaps = 3/357 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI R R FL+ L + + ++ +++ ++ + + + +L + IP + Sbjct: 1 MTILDRYISREFLRFFLLVILSFLSLFLIVDFFEKLKMLINYSATFYQILAFFFFRIPMM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + + S+++N+E++ + +G S P+L ++ L+++F F+ + Sbjct: 61 LSLTIPAAVLLSSLLTFGSLSKNSEIVAMRASGVSLYRSSIPILLISFLIALFTFVFSEL 120 Query: 121 IEPKCRST-IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 I P + + ++ + ++P + ++ Sbjct: 121 ITPYANEKAEYIRKVEIEKKEIQGIFKQEQIWYRGTRGIYNFKLFDPEHNTLRGITLNYM 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 D + + I + DR + + + R + + E+ + ++ Sbjct: 181 DRKMNLIMRVDAERAVWDRNQWVFYNLLIVRFDSAGFPVMERYGEKILDFPETPSDFRVI 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 K ++Q F L Y ++ H ++ V+ +I I + Sbjct: 241 QKDSEQMGYFELRKYVQKIRTEGYDATRYLADLHGKIAFPFVCVLLAVIGISFSL--KTE 298 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R IF L I F + F++ + + + + L++ K Sbjct: 299 RSGGLAGSIFAGLIIGFSYWILFAFSMSLGRSGTLPPLLAAWLANLLFGLSALVLFK 355 >gi|218551559|ref|YP_002385351.1| hypothetical protein EFER_4344 [Escherichia fergusonii ATCC 35469] gi|218359101|emb|CAQ91762.1| conserved hypothetical protein; putative inner membrane protein [Escherichia fergusonii ATCC 35469] gi|324112113|gb|EGC06091.1| inner membrane protein yjgQ [Escherichia fergusonii B253] gi|325499820|gb|EGC97679.1| hypothetical protein ECD227_3917 [Escherichia fergusonii ECD227] Length = 360 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 49/355 (13%), Positives = 116/355 (32%), Gaps = 3/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ + ++ + + +P + + Sbjct: 7 LDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDIQI 66 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 67 FFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAP 126 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+A + +E L+ + + + + Sbjct: 127 QGEQMARNYRAQAMYGGSLLSTQEGLWAKDGKNFVYIERVKGEKELGGISIYAFNDQRRL 186 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKA 242 I YA S + D D + L+ + +P S ++ + L Sbjct: 187 QSIRYAASATFDPDNKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVVALDP 246 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S L N + Y+ ++ Q L + L+++ Sbjct: 247 DALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPM 305 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P I L L I L ++ ++ Sbjct: 306 GVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGAL-LPSASFFLISLWLLMRR 359 >gi|261342655|ref|ZP_05970513.1| membrane protein, YjgP/YjgQ family [Enterobacter cancerogenus ATCC 35316] gi|288315303|gb|EFC54241.1| membrane protein, YjgP/YjgQ family [Enterobacter cancerogenus ATCC 35316] Length = 360 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 46/355 (12%), Positives = 116/355 (32%), Gaps = 3/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI R I + +M+ +V ++ +I+ + ++ + +P + + Sbjct: 7 LDRYIGRTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGNYDAMGAGMYTLLSVPKDVQI 66 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 67 FFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAP 126 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+A + ++ L+ + ++ + + + + Sbjct: 127 QGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDDELGGVSIYAFNNERRL 186 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + +A S D + + L+ + P + ++ + L Sbjct: 187 QSVRHASSAKFDAEHKQWRLSQVDESNLTDPKQITGTQTVTGTWKTDLTPDKLGVVALDP 246 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S L N + Y+ ++ Q L + L+++ Sbjct: 247 DALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPM 305 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P I L L I L M+ ++ Sbjct: 306 GVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGAL-LPSASFLLISLWMLLRR 359 >gi|315917902|ref|ZP_07914142.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC 25563] gi|313691777|gb|EFS28612.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC 25563] Length = 362 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 51/363 (14%), Positives = 122/363 (33%), Gaps = 12/363 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK ++Y+ + + F S + I + Q+ + + V+ S + G L+P + Sbjct: 2 MKKLDIYMTKNFLKYFSYSLFSFLGIFVLSQVFKVLRYVNEGQLSPGQIPLFIGNLLPGI 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + + M N E++ + +G L++ +F++ L+S+ +F + Sbjct: 62 IINVAPLAVLLGGLISINIMASNLEIISLKTSGIRFARLVRGPIFMSFLISLIVFYLNDR 121 Query: 121 -IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV--- 176 + + +EN FFR + Y+ K T + Sbjct: 122 VYPGSVVRNRELRGKEDVEEREVPKEKENAFFRNVEGRYVYYMKKINRETGIMDHVEVLD 181 Query: 177 -DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + ++ A+ G D R+ + D ++ + + + + Sbjct: 182 MSENFDKIERMITAKKGRYDFKRKLWVFEDAHIYYPDTDTVEARAFIQEQKYMDEPEYFI 241 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 S + + ++ L + + SE KR + + + + Sbjct: 242 SLSNIIPKQKTIAEL-KKAIKEGSATGNEIREILSELGKRYSFPFASFVVSFLGLAL--- 297 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLM 353 + + I I IS+ + + + + N Y P L ++ + L Sbjct: 298 GSHYVRGMSILNIVISILLGYAYYLV-EGAFEALGMNGYLNPFLSGWIPNLLFLAAGLYF 356 Query: 354 IKK 356 +++ Sbjct: 357 MRR 359 >gi|118581150|ref|YP_902400.1| permease YjgP/YjgQ family protein [Pelobacter propionicus DSM 2379] gi|118503860|gb|ABL00343.1| permease YjgP/YjgQ family protein [Pelobacter propionicus DSM 2379] Length = 367 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 56/357 (15%), Positives = 128/357 (35%), Gaps = 18/357 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 E YI+R I ++ C ++ I ++ +N + S ++ + + L Sbjct: 2 IIERYIVREICAPLVVICTVLIMIFSGFSAVRFLNDAVNGLLSGGTVVALVSLKVLIALE 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L+ + + E+ ++ G S+ LI VLFLAILL++ + Sbjct: 62 VLIPVTLYLAIVLALSRLYADGEITAMEAGGLSQKKLISAVLFLAILLALMVTGLSLHAR 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + L + Q + +E F+ L +L K +P V + Sbjct: 122 PWAYGKMYLLETRGQNEFDIAKVEAGRFYELSHNLVFFAEKLDPARNQARNVWVWEFGPE 181 Query: 183 THKIYYAQSGSIDL----DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 ++ A+S ++AI+ +G + + + ++ F+ LQ E Sbjct: 182 KRRVTSARSAFQTNGPGEGQKAIVFQEGSHYSLNLKTGTDHLVGFQENVLQLEPPQIPPA 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + + L +E R + + V+ L++I + Sbjct: 242 KYRRKAASTEHL----------ATSTDPADIAELQWRFSTGISTVLMALLAIPL---SRV 288 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIFLLMI 354 +R K + ++ + F ++ +E+ +P ++ + + L ++ Sbjct: 289 APRRGKYGKVVAAIILFFVIYNLSLIAKTWVEKQVVGAVPGIWWVTLLNAGLVLFLL 345 >gi|189500954|ref|YP_001960424.1| permease YjgP/YjgQ family protein [Chlorobium phaeobacteroides BS1] gi|189496395|gb|ACE04943.1| permease YjgP/YjgQ family protein [Chlorobium phaeobacteroides BS1] Length = 360 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 52/360 (14%), Positives = 119/360 (33%), Gaps = 3/360 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI R +++ + + V + V+ +++ + ++ LIP Sbjct: 1 MKLLDKYIARQYFTTYVFAGISFVSLFIVVSLIENLGSFIDKGIEAEQIILYYWSLIPET 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + +P + + + ++ ++EL + G L+KP L +A+L+S F ++ Sbjct: 61 ILLTSPISSLLASLYITGRLSGSSELTAMKTAGAGMHQLLKPFLAVALLVSFFNILNAGW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + PK + + + + N L+ I G+ I Sbjct: 121 LYPKAAALKNRFETQYFDKTFENISSSNNLHILESRNRILSIGSLDQQNNTGLNISLETF 180 Query: 181 TQTHKIYYAQSGSIDLDR--QAIILNDGEVHRKSPISKDIS-IMKFKSYTLQTESANSST 237 + I D IL++ S + + TL + + Sbjct: 181 EGPEIASRIDAKKISYDETLDRWILHETRTRVFSQNGMSYTLNPGNDTLTLSLSATSLRD 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ ++ ++ L+ +FH +L L VI L + + ++ Sbjct: 241 LSIQPDEMDIMQHYRYIDEKREAGFSNLDRVIVKFHNKLALPLASVIVILTGVPLSARKK 300 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + I G+ S ++ +P L LF I + + Sbjct: 301 RSGLAIEFGISLFTGFIYLGLQRTLSTAGYRGLLDPVLAAWLPDLLFLAVGIAIYKTANR 360 >gi|302037951|ref|YP_003798273.1| putative YjgP/YjgQ family permease [Candidatus Nitrospira defluvii] gi|300606015|emb|CBK42348.1| putative Permease, YjgP/YjgQ family [Candidatus Nitrospira defluvii] Length = 361 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 54/360 (15%), Positives = 131/360 (36%), Gaps = 7/360 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI R + F +S + F+ ++L+ + L+ + +LK+ +L+P+ L Sbjct: 4 TILDRYIFRELFSPFGISLAALCFVMLTKELLRLVELLVTKGIGFLSVLKVFAHLLPSFL 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + T ++ + EL+ + G S + L + V A L+ + Sbjct: 64 VLTLPIAGIIATITAFGRLSLDKELVAMRAAGFSLLRLSQSVFIFAALVCGLTLVMAQYG 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 +P +K+++ L+ +F + I + +GIF+ D R+ Sbjct: 124 QPWSNVNLKKVALNLLRDELVLELDRGVFNEAIPKMTIYVPDAQEGQDNRGIFVADERNP 183 Query: 182 QTHKIYYAQSGSIDLDRQAI----ILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 +I AQ + D + L +G +H + ++ + F SY L+ S Sbjct: 184 ADPRIIVAQQYQVMTDPASSQVALRLMNGVIHSRPQNPEEYQKISFTSYDLKLS---LSA 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + A ++ ++ + + E++K L ++F ++ + Sbjct: 241 SLYGAEERTPIDVIRAKLESTGWTDTNALRRLMEYYKDLAFPAASLVFCILGVPVGIVSK 300 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + + + +++ + +P+ L +F + +I + Sbjct: 301 RSGSIGGFAVGVLVVIAYYVINVACEFLVTTLWISPFAGAWLPNVIFTVVTILWFYRVSR 360 >gi|238023197|ref|ZP_04603623.1| hypothetical protein GCWU000324_03124 [Kingella oralis ATCC 51147] gi|237865580|gb|EEP66720.1| hypothetical protein GCWU000324_03124 [Kingella oralis ATCC 51147] Length = 355 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 38/360 (10%), Positives = 115/360 (31%), Gaps = 5/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+++ + + + I+ + I ++ ++V + +L + + +P Sbjct: 1 MNLITRYLIKRLAVASCYALFAILALYSFIDLISETSVVGQNQYTLWVATQYILMQMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L + N+EL +I +G S +I ++ + + +I + Sbjct: 61 AYQLMPLATLIGGLVALNQLANNSELAVIKTSGLSTANIIGIIIKFSAIFAIATVLLGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ ++ A A+ + ++ + + S N + + Sbjct: 121 LAPELSRRGDEMKANARAGHIAAAHN-GIWIKQPGSMINVASMLPDNTLVGIKIWHYNDQ 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 Q + A+ ++ A L++ + + + + +++ Sbjct: 180 FQLTEAISAEKATVANG--AWQLHNTHSTTLADNHAQPQQQAEREWQTDIGKPLLNVLLV 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K + + L + + Y + +L + ++ L+++ Sbjct: 238 KPEQMSFTALTQ-YIRYLKENHQQTQAYDVAWWNKLIYPIATMVMALVALAFTPNSGRHS 296 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 I L + F ++ P + + L + +I+K+ + Sbjct: 297 NMGLKLFGGICLGLLFFFTGRLFGFTTQLYGVPAMLSAI-LPTAAFGCWAMYLIRKQEQR 355 >gi|224368911|ref|YP_002603073.1| predicted permease family protein [Desulfobacterium autotrophicum HRM2] gi|223691628|gb|ACN14911.1| predicted permease family protein [Desulfobacterium autotrophicum HRM2] Length = 391 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 63/367 (17%), Positives = 132/367 (35%), Gaps = 17/367 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI R + F +S +F+ I + +I + N+V + + +L + +P Sbjct: 2 MTTINRYIFRELIPPFAISAVFLTSIFIMTRIPEITNMVVNYNTGIFSVLLLIACTLPRF 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + M+ + E++ + G + L+ PVL +L + I Sbjct: 62 MEFTIPMSVMISVLLTFMRMSGDNEIIALKGGGITIYRLLPPVLIFCLLGTAVTLWITII 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTL-QGIFIVDSR 179 P + K L + L + F D+ I IS + + +FI D R Sbjct: 122 GVPLGNMSFKTLGIAMARSNLNVALSDGTFNSSFKDVMIYISSMDVKTKKLRDLFIEDRR 181 Query: 180 DTQTHKIYYAQSGSIDLD----RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE---- 231 I A G + D A+ L G V++ S+ I+ + F +Y + + Sbjct: 182 TKDRVTISVAPEGVLVKDAVTGSYALRLYGGSVNQVDLKSRSINNVGFDTYDINLDFAQV 241 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 +S ++ L+ L L EFH++ + + + G++++ Sbjct: 242 QKSSKVGNKDFDEMTLNELRAFLKKTSE--KPELNAALMEFHEKFSIPIACIAMGILAMA 299 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI--LYLFLFCISSI 349 + A R+ F +++ +N Y P+ +++ + I Sbjct: 300 LGLQAASSRKTAGFGLGMF----FFLLYYLLLAAGWSAGENGLYPPLIGMWMPDIVMGGI 355 Query: 350 FLLMIKK 356 ++ + Sbjct: 356 GSFLLYR 362 >gi|189347121|ref|YP_001943650.1| permease YjgP/YjgQ family protein [Chlorobium limicola DSM 245] gi|189341268|gb|ACD90671.1| permease YjgP/YjgQ family protein [Chlorobium limicola DSM 245] Length = 403 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 66/399 (16%), Positives = 140/399 (35%), Gaps = 44/399 (11%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL+ F+++ + IVF+ + + + ++ + ++ + Sbjct: 1 MKIIDRYILKSHIGPFILAFITIVFVLVLQFLAGFSDRFLGKGINIADIAELVMLQSAWM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + +M ++E+ + +G S L PVL +A LLS+ + N+ Sbjct: 61 VVFAVPMAVLVAVIMAYGTMTNSSEMTVFRASGLSLYRLAVPVLIVAALLSLLVERFNNV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSR 179 + P+ K L A L EN F D I + K + + ++G+ + D R Sbjct: 121 VIPEANYRSKSLMMDIARAKPTFGLTENAFSSFIDGYSIFVRKTDEASKEIRGVVLYDLR 180 Query: 180 DTQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKD--------ISIMKFKSYT 227 + ++ + A+ G I + L +GE+H+ + F++ Sbjct: 181 NPKSRTMMSAERGVIRFSPDNRFLVMTLFNGEIHQIDQSDYHKYRAMRFGQHRLVFETTG 240 Query: 228 LQTESANSSTIVLKANDQNLSFL--------------------------LNPNPNNPNYR 261 ++ I ++ + L L Sbjct: 241 FGFSRTSNDRIRGNISELSAGELHVAASALQRGIVSAERRVASITDAGPLQREQERIEAD 300 Query: 262 PELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWG 321 Y E++K+ + +F L I R+ ISL++ F ++W Sbjct: 301 KMQYNKYLIEYYKKYAISVACFVFALAGIPLGVLA---RRGGFGVGAGISLAL-FVLYWS 356 Query: 322 FSYIIHKIEQNPYYIPILYLFLF-CISSIFLLMIKKKYT 359 KI + P+L ++ ++ +F L + + + Sbjct: 357 MIIGGEKIAERGLLDPVLSVWSANAVTGLFGLFLLHRMS 395 >gi|163746449|ref|ZP_02153807.1| permease YjgP/YjgQ family, putative [Oceanibulbus indolifex HEL-45] gi|161380334|gb|EDQ04745.1| permease YjgP/YjgQ family, putative [Oceanibulbus indolifex HEL-45] Length = 365 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 40/364 (10%), Positives = 110/364 (30%), Gaps = 22/364 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y R SF++ + + ++ + + + + +L ++ +P + Sbjct: 2 ILHFYFARRFFTSFMVITAVLAALVMLVDGVDQARRFADDDVGWDQVLGMTLLNMPQTIN 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M+ P + T + + R++E+++ G S + + + +A+++ N I Sbjct: 62 MILPLIMILATVALFIGLARSSEMVVTRAAGRSALRALVAPVVVALIIGTLAVAVLNPIV 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-------LYIKISKYNPNNTLQGIFI 175 +QL+ K + + + + L + + + + I Sbjct: 122 AATSERSEQLTQKYRSNGSSALSVSDEGLWLRQGTEEGQSVIRAWRTNSDASVLYNVTII 181 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQA------IILNDGEVHRKSPISKDISIMKFKSYTLQ 229 + + A+S + L G + + + Sbjct: 182 SYDAEKGPIRRIEAESAQLSGGDWQLTGAKIWPLEAGVNAEGAAEEHETLTI-----PSS 236 Query: 230 TESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 + + ++ L + L + F V L++ Sbjct: 237 LTVERIRESIARVAAVSIYEL-PEFIRQLEQAGFSTRQHEVWLQAELARPFFLVAMVLVA 295 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 R + S+ + FG+++ S+ + +N L + +++I Sbjct: 296 SAF--TMRHTRFGGTGVAVLASILLGFGLYFIRSFAQ-ILGENGQIPVTLAAWAPPVAAI 352 Query: 350 FLLM 353 FL + Sbjct: 353 FLAL 356 >gi|294139611|ref|YP_003555589.1| hypothetical protein SVI_0840 [Shewanella violacea DSS12] gi|293326080|dbj|BAJ00811.1| conserved hypothetical protein [Shewanella violacea DSS12] Length = 352 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 118/356 (33%), Gaps = 4/356 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK +LYI R + + + L + ++ +I+ + ++ +V + ++ +LIP Sbjct: 1 MKILDLYIARTLVSASALCLLILTGLSGIIKWVDQLRVVGRGSYTMLDAGIYVLFLIPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + ++ +EL+++ + G SR + + A+ L + + + Sbjct: 61 IEMFFPMAVLLGALIGMGTLASGSELVVMQSAGLSRFQITLSAMKTAVPLMLMIMVLGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P +L A + ++ + D N N Sbjct: 121 GAPAAERRANELQAFKVSGGSLIKSSRGIWAKDGDLFVNIGEVENINRLHNITLYEFDST 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 K +A+ G D L D + ++ + + S + + Sbjct: 181 LTLVKTIHAERGVYSND--HWRLIDVRQTDLTKDKVTLTDLTLYRWDSTLTPDKLSVVSV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K ++ L+ + + Y +++ Q + + L+++ Sbjct: 239 KPESLSIQGLM-GYLDYLKVNNQDSGRYELALWRKIMQPVTVAVMMLVALSFVFGPLRTV 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + +F + + + P ++ + + S+I + I+K Sbjct: 298 TMGARVLLGVIAGFTFYISSEIFGPLTLVYGLPAFLGAV-MPALIFSTIAIYFIRK 352 >gi|224368912|ref|YP_002603074.1| putative permease [Desulfobacterium autotrophicum HRM2] gi|223691629|gb|ACN14912.1| putative permease [Desulfobacterium autotrophicum HRM2] Length = 359 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 62/353 (17%), Positives = 118/353 (33%), Gaps = 6/353 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y L+ R F + + ++ I + L + S SL L IP + Sbjct: 1 MSILHRYWLKEFTRFFAIVQMLLLCIFLAVDYLSNMEKFLRSNFSLIQGLGYILLKIPFM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 TP + T V + MNRN ELL + +G S L+KPV+ + ++L++ + Sbjct: 61 FVQFTPAGVVLATIVVFSLMNRNNELLALKGSGVSVYHLLKPVVLVGVILAMTMIFLGET 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + + + Y + D + I I+ +NP + + S Sbjct: 121 IVPYTMAKANHIRSSTLKKNKKIYATWENIWIRDGNKIIHINYFNPADNSISGITITSFG 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHR--KSPISKDISIMKFKSYTLQTESANSSTI 238 + + D L++ + DI K++ L E A+ T+ Sbjct: 181 ADFKIATRVDAENGRFDSGQWQLSNVLEQNNPGDEHNADIQFYDHKAFALDVEPADLKTV 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 K + ++ L + Y +F ++ + ++ L+ A A Sbjct: 241 AKKTDQMSIQEL-KAYIHKIENEGYDATHYIVDFWAKIAFPIICLVMALVGAGAGMLSAA 299 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + I ++ +W + P L + + I L Sbjct: 300 KENMPLGIALGIGVAFC---YWVVHGFCTSLGYGGMIPPFLSAWTADLIFICL 349 >gi|87302818|ref|ZP_01085629.1| possible permease [Synechococcus sp. WH 5701] gi|87282701|gb|EAQ74659.1| possible permease [Synechococcus sp. WH 5701] Length = 401 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 52/361 (14%), Positives = 122/361 (33%), Gaps = 22/361 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQIL-QRINLVSSSTESLNILLKISGYLIPTVL 61 + ++ + L ++ + ++ + + V+ S L L++ G +P L Sbjct: 29 LMDRWLTNELMGPLLFGVAAFTAVSLSVGVVFELVRRVAESGLPLLTALQVLGLRMPGFL 88 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P M T ++++ N+EL+ + + G S ++ P L +A+L+S+ F+ ++I Sbjct: 89 VLSFPMATLMATLLAYSTLSSNSELIALRSVGVSTWRMVLPALIVAVLMSLLTFVFNDLI 148 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P +A + N+ + K+ + L +F Sbjct: 149 VPSANLEATNTLNQALGKAIAAEKGSNIIYSRFSRRPSKLDESGSERYLSQLFYSRQFKD 208 Query: 182 QTHKIYY--------------AQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 + A++G+ + + DG++ S+ + KF Y Sbjct: 209 GEMEEVTVLDFSRPSGTQILKAKTGTWNDEAGMWEFRDGQIV-LVGDSETTTSAKFDRYL 267 Query: 228 LQTESANSS--TIVLKANDQNLSF-LLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVI 284 + + A ++S L + R ++ ++ Sbjct: 268 YPLDQGPLKLAALPKDAASMSVSEALRAETLLREAGDQKEARRLRVRIQEKFAFPAICLV 327 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 FGLI + + + IS+ + F ++ S+I + P+L + Sbjct: 328 FGLIGSSLGVRPNA--RTSRSQGFGISVLLIFS-YYLMSFIFSSLGVKGTLGPVLAAWSP 384 Query: 345 C 345 Sbjct: 385 V 385 >gi|209694121|ref|YP_002262049.1| putative permease [Aliivibrio salmonicida LFI1238] gi|208008072|emb|CAQ78213.1| putative permease [Aliivibrio salmonicida LFI1238] Length = 358 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 51/359 (14%), Positives = 122/359 (33%), Gaps = 5/359 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I + + + +V ++ +I+ ++++ V T L L +P + Sbjct: 3 KILDWYIGRTIIATSSLCLVTLVGLSSIIKYVEQLRKVGKGTYDLLDALYFVILSMPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++ + VL AI L + + Sbjct: 63 EMFFPMAALLGALIGLGMLAASSELVVMQAAGYSKLDIGISVLKTAIPLMLMVMALGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + L A + + + ++ + +D + ++ Sbjct: 123 APQAQKMARDLRAFSISGGNIASMRTGVWAKDGNDFIYLSRVDDQAKLYGVTLWQFDKER 182 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDIS-IMKFKSYTLQTESANSSTIVL 240 + I +A+ + + L D + + + S++ + + + Sbjct: 183 KLDDIVFAKKAEYESKEEGWKLIDVSITDMKDENIITEKKLDSLSWSTTLTPDKLAVVSV 242 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K +Q+L+ L + N Y F ++ Q + + L+++ R Sbjct: 243 KPEEQSLTGLYD-YVNYLKDSELDASRYELAFWRKALQPISVAVMMLLALSFVFGPL--R 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYII-HKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 I + F + + N + I F I L ++ +K Sbjct: 300 SVTMGARILSGVIAGFSFYISNEVFGPMTLVYNIHPIFGALGPSFVFLLITLGLLNRKL 358 >gi|91774576|ref|YP_544332.1| permease YjgP/YjgQ [Methylobacillus flagellatus KT] gi|91708563|gb|ABE48491.1| permease YjgP/YjgQ [Methylobacillus flagellatus KT] Length = 356 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 45/358 (12%), Positives = 127/358 (35%), Gaps = 4/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+ + I S ++ L ++ + ++Q + + ++ +L P Sbjct: 1 MKLLNRYLAQEIVSSIMLIMLALLAMFSFFDLIQELESLGKGNYGISKVLLYVLLSAPGH 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + T L +R +EL+I+ +G S + +L + ++ ++ F+ + Sbjct: 61 VYEVVPVAVLVGTMYALGQFSRYSELIILRVSGISIRKIAFSLLRVGLVFAVITFLVGEL 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P +++ +A ++ L+ + + + + + + Sbjct: 121 IAPMSEKAAQRIRIQATDSVVAQDFRSGLWVKDGNSFVNVQNVMPDASLMDIHIYEFDNE 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + I A+ GS D + L+ ++ + ++ + +++ Sbjct: 181 FRLRTISNAKEGSF--DGNSWNLHQVTQTHFEEQKIRTNVFQEATWQSLIRPELLNVLLV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + L N+ + ++ ++ L ++ ++++ + Sbjct: 239 VPEKMSAWNLYF-YINHLASNKQKTSRHQIALWSKMIYPLACLVMVILALPFGFLQQRSS 297 Query: 301 QRKKIHPIFISLSISFGVFW-GFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I L I + V F ++ + +P + ++ LF + IF+L ++ Sbjct: 298 SASTKIFSGIMLGIVYQVLNRVFVHLGLLNDWSPLFSAVMPTLLFMAAGIFMLYWVER 355 >gi|30248805|ref|NP_840875.1| hypothetical protein NE0801 [Nitrosomonas europaea ATCC 19718] gi|30180400|emb|CAD84712.1| conserved hypothetical protein [Nitrosomonas europaea ATCC 19718] Length = 358 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 59/360 (16%), Positives = 134/360 (37%), Gaps = 20/360 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI R + F++ + ++ + + + + + T + K+ G Sbjct: 1 MKIIERYITRELLFPFIVVTVILIGLFVSFSVARFLTSAVTETLGTAAMFKLVGLKTIIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P F + L+ MNR+ E+ ++ G +I+ V +A+ ++I I Sbjct: 61 LEVLVPIAFYVAVIYGLSRMNRDQEINVLRTAGYGDNRIIRTVFVIALPIAILSGILSVY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNTLQGIFIVDSR 179 P + + A+A+ L + + F+ + I I + R Sbjct: 121 ARPWAYAESYIMDAQAEAELNTNRFQPGRFYGSEKSGRVIFIRGKDDLEKRMEGVFHYIR 180 Query: 180 DTQTHKIYYAQSGSID----LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 T+ +I ++ G I L +G+++R S + S ++F+ E+ + Sbjct: 181 TTEDREIIISREGYQQPMTAEQWPHIELREGQIYRLSFDTVKDSAIRFEKMIYFNENDQA 240 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 KA + L + +E RL++ + V+ LI++ Sbjct: 241 QNYRRKAA--STRSLWDSEE----------PREIAELQWRLSRPVATVLLALIAVSFT-- 286 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 ++ K F+ ++ F V++ S + + + ++ I ++M++ Sbjct: 287 -RTAPRKDKTDRTFLVAALVFAVYYNLSGLAKTWVEQGVVAAMPGVWWVYGLLIIIVMLR 345 >gi|257465008|ref|ZP_05629379.1| permease, inner membrane protein yjgQ [Actinobacillus minor 202] gi|257450668|gb|EEV24711.1| permease, inner membrane protein yjgQ [Actinobacillus minor 202] Length = 360 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 54/360 (15%), Positives = 119/360 (33%), Gaps = 9/360 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E YI + I + ++ +V + +I+ ++ V + + + IP Sbjct: 6 MNVLERYIGKTILSAIFLTLFLLVGLGAIIKFVEEFKAVGKGSYDALLAAYYTFLTIPRD 65 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + L ++ +EL+++ +G SR + V+ A+ L +F I Sbjct: 66 VETFFPIAALLGSLLGLGNLASRSELVVMQASGFSRFRIGLAVMKTAVPLILFTMIIGEW 125 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + + F+ D + ++ I + L + I Sbjct: 126 GVPQT-EQYARDMRSVAQSGGSMLSTSGGFWARDGENFVYIRRIGSETQLNNLSIYHFDK 184 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + I A D IL E + S K + + + + L Sbjct: 185 KELKSITQAAEAKYTNDN--WILKKVEKSTIEGNTIKQSKEKDQPWQTSITPSKLGIVSL 242 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K +++ L + + + + F +++ Q + + L++I R Sbjct: 243 KPESLSITGLAD-YVGFLKETGQDPKRFEITFWRKVYQPISMAVMMLLAISFIFGPL--R 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI---PILYLFLFCISSIFLLMIKKK 357 I I + F + + + L L C+S ++ L+ KK+ Sbjct: 300 SSTMGAKIVIGIVAGFMFYVANIVFGNMSLIATWLPVSIGALIPSLICLSIVWWLLTKKR 359 >gi|91792233|ref|YP_561884.1| permease YjgP/YjgQ [Shewanella denitrificans OS217] gi|91714235|gb|ABE54161.1| permease YjgP/YjgQ [Shewanella denitrificans OS217] Length = 351 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 44/353 (12%), Positives = 117/353 (33%), Gaps = 3/353 (0%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 +LYI R I + + L + ++ +I+ + ++ LV + ++ +LIP + Sbjct: 2 ILDLYIARAILATSSLCLLILTGLSGIIKWVDQLRLVGRGSYTMIDAGIYVLFLIPRDIE 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M P + + + ++EL+++ +G SR+ + + A+ L + + + Sbjct: 62 MFFPMAVLLGALIGMGMLASSSELVVMQASGMSRLQISMSAMKTAVPLMLLVMVLGEWGA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + K+L A + ++ + D N+ + Sbjct: 122 PVAERSAKELQATKLSGGSLIKSHRGIWAKDGDLFVNIGEVETVNSLNNITLYEFDEAMK 181 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 K+ +AQ +A L + S + +S+ + +K Sbjct: 182 LVKVIHAQEAQF--KDEAWQLQQVKTTVFSDEKITLVEQPLQSWNSSLTPDKLGVVSVKP 239 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 ++ LL+ + + Y +++ Q + + L+++ Sbjct: 240 EALSIQGLLD-YLDYLEVNQQDPSRYNLALWRKIMQPVTIAVMMLVALSFVFGPLRTVTM 298 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + F + + + + P + + L ++ + K Sbjct: 299 GARVLLGVVAGFGFYISNQIFGPMSIVYELPAAVGAIAPSLLFTTAAVYYIRK 351 >gi|260221416|emb|CBA29957.1| hypothetical protein Csp_A14750 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 384 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 49/368 (13%), Positives = 133/368 (36%), Gaps = 11/368 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRI---NLVSSSTESLNILLKISGYLI 57 MK+ + + + + L + + + +++ + + ++SS + L +I Sbjct: 17 MKTLRKLLYGEVITAVTLVTLGFMALFFFFDVVEELQSVSRIASSGYQVPQALIYVALMI 76 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 P + + P + T V+ + R++E I+ +G ++ +L L + +F F Sbjct: 77 PAHVYELFPITVLIGTIFVMARLARSSEFTILRTSGLGPWRALRTLLALGLGFVLFTFAV 136 Query: 118 ENIIEPKCRSTIKQLSAKAQLALTFSYLEEN-LFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + + P T + L ++ Q ++ + + + + + TL+ + + Sbjct: 137 GDYVAPLADKTAQLLKSRFQGKISVGKTGAWLKERQAYGSYSVNVGALSSDATLKDVRVY 196 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK---FKSYTLQTE-S 232 + + D ++ +L G + +S + F+S+ T+ S Sbjct: 197 EFDNQGKVVSLTEAKAGTFGDDESWMLTQGVRTEFTSGPDQVSKVDRVAFESFRWPTQIS 256 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 A + ++ + L + N + + Y +F K++ L ++ ++S+ Sbjct: 257 AEMVAAAVLRPERMGTIDLFQYIRHLNANGQSAQKYEIQFWKKVFYPLSCLVMVVLSLPF 316 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFL--FCISSI 349 A + ISF + + + + P+ L + F + Sbjct: 317 AYLHFRSGSIAGYTFGGVMAGISFVLLNNVLNDLGNLQGWQPWITAALPGLIYSFFSLAA 376 Query: 350 FLLMIKKK 357 F ++ ++ Sbjct: 377 FTWLVLRR 384 >gi|110680307|ref|YP_683314.1| YjgP/YjgQ family permease [Roseobacter denitrificans OCh 114] gi|109456423|gb|ABG32628.1| permease YjgP/YjgQ family, putative [Roseobacter denitrificans OCh 114] Length = 365 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 44/359 (12%), Positives = 107/359 (29%), Gaps = 12/359 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 LY R L++ + + + ++ ++ + + S + ++ P + Sbjct: 2 ILHLYFARRFASWLLIAFIALSALIALVDLVDQTRRFADRGVSATGIFELVILNTPQTIS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + T S+ R++EL+ +G S + + + + ILL + N I Sbjct: 62 QILPLIVLLATVAFFLSLARSSELIATRASGRSAMGALVAPVSVVILLGTLATTTLNPIV 121 Query: 123 PKCRSTIKQLSAKAQ-------LALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI 175 +LS + T + S + + F+ Sbjct: 122 AATSKKYNELSQIYRTGGVSTLSISTEGLWLRQATDDGQMVIRAWRSNPDASVLFDVTFL 181 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQ-AIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + +A S + + D + R + + + + Sbjct: 182 AYEVIGTPVRRIHADSAELKDGAWLLRNVKDWPLARGINSEGNATEHRSLTIPSSLTVER 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + ++ + + N +R L + LF V LI+ Sbjct: 242 IRESFGHPSTISIWEMTD-FIKQLNQAGFSSLQHRVWLQSELARPLFLVAMVLIASAF-- 298 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 R + ++ + F +++ S+ + +N L + I+S+ L Sbjct: 299 TMRHTRFGGTGVAVLAAVLLGFALYFVRSF-GLILGENGQLPVYLAAWAPPIASVLLAF 356 >gi|254410176|ref|ZP_05023956.1| putative permease, YjgP/YjgQ family [Microcoleus chthonoplastes PCC 7420] gi|196183212|gb|EDX78196.1| putative permease, YjgP/YjgQ family [Microcoleus chthonoplastes PCC 7420] Length = 380 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 48/365 (13%), Positives = 128/365 (35%), Gaps = 14/365 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + YI+ + FL + + + + ++LK+ +P Sbjct: 17 SVMDRYIITELIPPFLFGMGMFSSVGVTIGSLFDLMRRAVDEGLPATLVLKVLLLSLPQF 76 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + T + ++ ++EL+ + + G S L+ P L L+++++ F Sbjct: 77 MAYAFPTSVLLATLLTYSRLSSDSELIALRSCGVSIYRLVLPALLLSLVVTGITFGFNEY 136 Query: 121 IEPKCRSTIKQLSAKA----QLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + P KA + + + + ++ ++G+ I+ Sbjct: 137 VVPASNYQATITLEKALGEEKPTFKERNIFYREYAEDKTLKRLFYAQNFDGERMKGLTIL 196 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE--SAN 234 D ++I A S ++ + +G ++ SP + +I++F+ LQ + Sbjct: 197 DWSQQSLNQIVTADSAIWNVAQSTWDFYNGTIYLVSPDASYRNIVRFEHQQLQLPRIPLD 256 Query: 235 SSTIVLKANDQNLSFLL-NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + ++ N++ + E + + ++ V+FGL+ Sbjct: 257 LARKDRDYDEMNITQARERLELERQSGDEEDIRKLKIRISQKFALPFACVVFGLVG---G 313 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFL 351 ++ K IS+ + F ++ I + + Y P++ +L ++ Sbjct: 314 SLGNQPQRTSKATGFGISVLVIFA-YYMLMAIGDALGLSNYLPPLISAWLPNLMGFAVGG 372 Query: 352 LMIKK 356 ++ + Sbjct: 373 FLLIR 377 >gi|304396397|ref|ZP_07378278.1| permease YjgP/YjgQ family protein [Pantoea sp. aB] gi|304355906|gb|EFM20272.1| permease YjgP/YjgQ family protein [Pantoea sp. aB] Length = 358 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 39/357 (10%), Positives = 113/357 (31%), Gaps = 2/357 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + YI + I + +++ +V ++ +I+ + ++ + S + +P + Sbjct: 3 RVLDRYIGKTIFNTIMLTLFMLVSLSGIIKFVDQLRKTGQGSYSALSAGYYTLLSVPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ + +EL+++ G +R+ + V+ AI L + + Sbjct: 63 EIFFPMAALLGALLGLGALAQRSELVVMQAAGFTRMQVALSVMKTAIPLVLLTMAIGEFV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + A+ + L+ + + N + Sbjct: 123 APSGEQMARNYRAQQLYGGALVSTQNGLWAKDGNSFIYIERIKGDNEIDGVSIYNFNDQR 182 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK-SYTLQTESANSSTIVL 240 + + YA + + D D++ +L+ + + + + + L Sbjct: 183 RLQSVRYAATATWDKDKKRWLLSQVDESNLTDPKQITGSQSLSGEWKTNLTPDKLGVVAL 242 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + ++ L + + Y ++ Q L + L+++ Sbjct: 243 DPDALSIRGL-HSYSKYLKQSGQEAGRYELNMWSKIFQPLSVAVMMLMALSFIFGPLRSV 301 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P + + + ++IK++ Sbjct: 302 SMGVRVVTGISFGFLFYVLDQIFGPLSLVYGLPPILGAILPSFAFFAISMFMLIKRR 358 >gi|313206715|ref|YP_004045892.1| permease yjgp/yjgq family protein [Riemerella anatipestifer DSM 15868] gi|312446031|gb|ADQ82386.1| permease YjgP/YjgQ family protein [Riemerella anatipestifer DSM 15868] gi|315023785|gb|EFT36787.1| hypothetical protein RAYM_00180 [Riemerella anatipestifer RA-YM] gi|325335845|gb|ADZ12119.1| permease YjgP/YjgQ family protein [Riemerella anatipestifer RA-GD] Length = 364 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 43/364 (11%), Positives = 128/364 (35%), Gaps = 10/364 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK-ISGYLIPT 59 MK + YI++ + + + + I V+ I + + S ++ L + + Sbjct: 1 MKIIDAYIIKKFLGTLVFMLVLLSIIVIVVDIQAKAPNIEKSGYTVGDFLLHFYPFWMIY 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ + + M NTE++ I ++G S +P +A+ +++F+ + + Sbjct: 61 LILTFMSILVFISVIYFSSRMADNTEIVAIVSSGASFHRFARPYFMVAVGIALFMLMLNH 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFF--RLDDDLYIKISKYNPNNTLQGIFIVD 177 P +L + + ++ ++ Y+ I Y+ ++ Sbjct: 121 FALPWANVKKNELMVFTESQVRQEEKNRSVAISAQMSPTEYVFIGSYHRKEARGSDYLYQ 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 D I+ + + D + + + K + + + T Q+ Sbjct: 181 KFDKNNKLIHQIRGDYVSWDEKKQAFSITSFYEKKAGKNETEKLSNGTQTYQSFGYPPEE 240 Query: 238 IVLKA---NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + ++ L+ + TY +E H R + + +I ++ + A Sbjct: 241 LFPDELLGENKTTPELVKFINREKIKGNGNINTYLNELHARTSMPVSIIILTILGLALA- 299 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYI-IHKIEQNPYYIPILYLFLFCISSIFLLM 353 + ++ + + ++++F + F + + + +++ F + + LL+ Sbjct: 300 --SEKKRGGIGVNLAVGIALAFVFIFSFEALKVVSSSKILTPFVAMWMPNFVFAPLALLL 357 Query: 354 IKKK 357 ++ Sbjct: 358 YFRR 361 >gi|237710072|ref|ZP_04540553.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|229456165|gb|EEO61886.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] Length = 365 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 51/362 (14%), Positives = 126/362 (34%), Gaps = 7/362 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPTV 60 K ++YI++ ++ + I+ IA V + + I+ ++ L I+ IP Sbjct: 8 KRLDIYIIKKFLGTYFFAIALIISIAVVFDVNENIDRFINNKAPLKAIVFDYYMNFIPYF 67 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +P + + + N+E++ + +TG S +++P + A ++S+ F Sbjct: 68 SNLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMMRPYMISAAIISVVTFGLGAY 127 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + PK T + + Y+ + N N T + D Sbjct: 128 VIPKGNVTRLDFEDRYKKKKKQEYVRNVQLEVDSGVIAYIERYENYNKTGYRFSLDKFDD 187 Query: 181 TQTHKIYYAQSGSIDLDR-QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + A+S + D + + + + + I+ ++ E + + Sbjct: 188 KKLVAHLTARSVTYDTASVHKWTIKNYMIREMEGMREKITRGDRLDTIIKMEPQDFLIMK 247 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + L ++ + E+++R+ I I + + Sbjct: 248 GQQQTMTSPELKEYIDKQKRRGFANIKEFEIEYYQRIAMSFAAFILTTIGVSL---SSRK 304 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL-LMIKKKY 358 + + + L++SF + F + N PI+ +++ I F+ + + +K Sbjct: 305 MKGGMGLHLGVGLALSFS-YILFQTVSATFAVNGNTPPIIAVWIPNILYTFIAIYLYRKA 363 Query: 359 TK 360 K Sbjct: 364 PK 365 >gi|270296760|ref|ZP_06202959.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270272747|gb|EFA18610.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 378 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 55/363 (15%), Positives = 126/363 (34%), Gaps = 7/363 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 +K + YI++ +++ + I+ IA V ++++ S N I+ IP Sbjct: 20 LKRLDWYIIKKFLGTYVFAIALIISIAVVFDFNEKMDRFMSHEAPWNAIVFDYYLNFIPY 79 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + +TG S +++P + A ++++ F + Sbjct: 80 FANLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMLRPYMVSAAIIAVVTFCLGS 139 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + PK T K + + + + T + Sbjct: 140 YVIPKGSVTRINFEDKYYKPRKANTARNIQLEVDSGVIAYIERFEDYSKTGYRFSLDKFN 199 Query: 180 DTQTHKIYYAQSGSIDLDR-QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 D Q A+S + D + D + + + + I+ TL E A+ + Sbjct: 200 DKQLVSHLTARSITYDTTAVHKWKIKDYMIRQMDGMKESITKGDRIDTTLFMEPADFLIM 259 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + L ++ + E+HKR+ I LI + + Sbjct: 260 KNQQEMLTSPQLSEYISRQRQRGFANIKEFEIEYHKRIAMSFASFILTLIGVSL---SSK 316 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF-CISSIFLLMIKKK 357 + + I L++SF + F I N P++ +++ + + + +K Sbjct: 317 KTKGGMGLHLGIGLALSFS-YILFQTIASTFAVNGNMPPVIAVWIPNIMYAFIAFYLYRK 375 Query: 358 YTK 360 K Sbjct: 376 APK 378 >gi|160888237|ref|ZP_02069240.1| hypothetical protein BACUNI_00646 [Bacteroides uniformis ATCC 8492] gi|317480118|ref|ZP_07939228.1| hypothetical protein HMPREF1007_02345 [Bacteroides sp. 4_1_36] gi|156862183|gb|EDO55614.1| hypothetical protein BACUNI_00646 [Bacteroides uniformis ATCC 8492] gi|316903665|gb|EFV25509.1| hypothetical protein HMPREF1007_02345 [Bacteroides sp. 4_1_36] Length = 378 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 55/363 (15%), Positives = 126/363 (34%), Gaps = 7/363 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 +K + YI++ +++ + I+ IA V ++++ S N I+ IP Sbjct: 20 LKRLDWYIIKKFLGTYVFAIALIISIAVVFDFNEKMDRFMSHEAPWNAIVFDYYLNFIPY 79 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + +TG S +++P + A ++++ F + Sbjct: 80 FANLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMLRPYMVSAAIIAVVTFCLGS 139 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + PK T K + + + + T + Sbjct: 140 YVIPKGSVTRINFEDKYYKPRKANTARNIQLEVDSGVIAYIERFEDYSKTGYRFSLDKFN 199 Query: 180 DTQTHKIYYAQSGSIDLDR-QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 D Q A+S + D + D + + + + I+ TL E A+ + Sbjct: 200 DKQLVSHLTARSITYDTTAVHKWKIKDYMIRQMDGMKESITKGDRIDTTLFMEPADFLIM 259 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + L ++ + E+HKR+ I LI + + Sbjct: 260 KNQQEMLTSPQLSEYINRQRQRGFANIKEFEIEYHKRIAMSFASFILTLIGVSL---SSK 316 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF-CISSIFLLMIKKK 357 + + I L++SF + F I N P++ +++ + + + +K Sbjct: 317 KTKGGMGLHLGIGLALSFS-YILFQTIASTFAVNGNMPPVIAVWIPNIMYAFIAFYLYRK 375 Query: 358 YTK 360 K Sbjct: 376 APK 378 >gi|50119364|ref|YP_048531.1| putative permease [Pectobacterium atrosepticum SCRI1043] gi|49609890|emb|CAG73325.1| putative permease [Pectobacterium atrosepticum SCRI1043] Length = 358 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 39/355 (10%), Positives = 110/355 (30%), Gaps = 2/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + + + +V ++ +I+ + ++ V S + +P + + Sbjct: 5 LDRYIGKTIFTTIMTTLFMLVSLSGIIKFVDQLRKVGQGEYSALGAGLYTLLSVPKDIEI 64 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 65 FFPMAALLGALLGLGQLATRSELVVMQASGFTRLQIATAVMKTAIPLVLLTMAIGEWVSP 124 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + ++ + + L+ + ++ + Sbjct: 125 QGEQMARNYRSQMISGGSMISTQGGLWAKDGNNFIFIERVTGDKELSGVSIYRFDDQNKL 184 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK-SYTLQTESANSSTIVLKA 242 + YA S + DR L+ + S + + + L+ Sbjct: 185 LSVRYAASAEFEDDRNVWKLSQVDESDLSDGKQIGGSQTLSGEWKTNLTPDKLGVVALEP 244 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++ L N + Y+ ++ + + L+++ Sbjct: 245 DALSIRGLHN-YAKYLKQSGQESNRYQLNMWSKIFAPVSVAVMMLMAVSFIFGPLRSVSA 303 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I IS F + + + P + + + L++K++ Sbjct: 304 GSRIVIGISFGFLFYLLNEIFRPLSLVYGIPPILGAILPSSVFLFISVALLLKRR 358 >gi|149190546|ref|ZP_01868816.1| hypothetical protein VSAK1_13861 [Vibrio shilonii AK1] gi|148835670|gb|EDL52637.1| hypothetical protein VSAK1_13861 [Vibrio shilonii AK1] Length = 371 Score = 110 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 52/360 (14%), Positives = 118/360 (32%), Gaps = 23/360 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L L + + + Q +Q + S +++ ++G +PT+ Sbjct: 2 IIVRYLIRETVKSQLAIFLVLFLVFFSRQFIQVLADASDGDIPAGLIMTLAGISMPTMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ ++LA+L + + + Sbjct: 62 LMFPLSIYIGILVTFGRLYAESEITVMNATGIGNKFLIRAAMYLAVLTTSLAAFNAFWLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + Q+ + + L+ F R D + + L +F+ Sbjct: 122 PWTQEQEVQIRERLASENSVELLQTGSFQRTPDGSSVVFIDSIKDKKLTNVFVAQLNPRD 181 Query: 183 T-----HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + RQ I L DG + P + + +F Y Sbjct: 182 SVLPSVISAKSGDVKELSDGRQVIALYDGVRYEGVPTRLEYMVTEFTDYEGVIGQREVQQ 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 LL ++E H R++ V L++++ A Sbjct: 242 RGRSWMAIPTMELL----------GNPDPKAQAELHWRISL---VVCIPLLTMLVVPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-----YIPILYLFLFCISSIFLL 352 + ++ K + ++ F F S + +E + P+ + L + Sbjct: 289 VNPRQSKFAKMGPAILAYFAYFMAISAMKSALEDGAFPSYIGLWPVNFALLLAAIGVNTW 348 >gi|126736392|ref|ZP_01752134.1| putative permease [Roseobacter sp. CCS2] gi|126714213|gb|EBA11082.1| putative permease [Roseobacter sp. CCS2] Length = 364 Score = 110 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 50/361 (13%), Positives = 116/361 (32%), Gaps = 13/361 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y RSFL + I + ++ ++ S + LL +S IP Sbjct: 2 ILHRYFASRFLRSFLGVGMVFFLIMLFVDLVDQLRRFGSKDATFVDLLMLSLLNIPQAFY 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + T + S++R++E+++ G S + + L +A+L+ IF N I Sbjct: 62 AILPLIMILATIALFLSLSRSSEMVVTRAAGRSALHSLLAPLTVALLVGIFAVGVMNPIV 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIK----ISKYNPNNTLQGIFIVDS 178 + S + + + + + + N + TL + Sbjct: 122 AGTSKEFEARSDALRGDSSVLSFGSSGLWLRQGNATGQTVIRAQSANLDGTLLTDVTFLT 181 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK---SYTLQTESANS 235 + I + S +L A +L D + + + ++ + + + Sbjct: 182 FAPDGNPITRISAASAELTTGAWVLRDAKSWQLAGVTTPEASAQLDAERTVQSTLTPDQI 241 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + + L + + + FH L +F V LI Sbjct: 242 RDSFGTPSSIPIWEL-PAFIDRLQTAGFSAQRHLVWFHTELALPIFLVSMVLIGASFTL- 299 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF--LFCISSIFLLM 353 R + + ++ ++F ++ ++ + +N +L + F I + Sbjct: 300 -RHQRGGRTGMMVMFAVLLAFVTYFIRNFAQ-VLGENGQLPVLLAAWAPPFAAIGISMGF 357 Query: 354 I 354 + Sbjct: 358 L 358 >gi|251791279|ref|YP_003006000.1| permease YjgP/YjgQ family protein [Dickeya zeae Ech1591] gi|247539900|gb|ACT08521.1| permease YjgP/YjgQ family protein [Dickeya zeae Ech1591] Length = 356 Score = 110 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 42/356 (11%), Positives = 115/356 (32%), Gaps = 2/356 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + YI + I + +M+ +V ++ +I+ + ++ V S+ + +P + Sbjct: 3 RVLDRYIGKTIFNTIMMTLFMLVSLSGIIKFVDQLRKVGQGGYSVMGAGLYTLLSVPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ +EL+++ +G +R+ + V+ AI L + + Sbjct: 63 EIFFPMAALLGALLGLGTLATRSELVVMQASGFTRLQIAGSVMKTAIPLVLLTMAIGEWV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + + ++ + D + ++ I + + L G+ I Sbjct: 123 APAG-EQMARNYRSQMMYGGSMLSTQSGLWAKDGNDFVYIQRVAGESELLGVNIYHFDKQ 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + ++ + + E S + + L+ Sbjct: 182 NKLLSVRYAASAVYENGGWKLSQVEESDLSDGKQIGGSQTVSGEWKTNLTPDKLGVVALE 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + ++ L + N + Y+ +L L + L+++ Sbjct: 242 PDALSIRGLYD-YINYLRQSGQEASRYQLNMWSKLFAPLSVAVMMLMALSFIFGPLRSVP 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I IS F V + + P + + +L++K++ Sbjct: 301 AGMRIVIGISFGFLFYVLDQIFGPLSLVYHIPPVLGASLPSALFLFISIMLLLKRR 356 >gi|218246939|ref|YP_002372310.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 8801] gi|257060003|ref|YP_003137891.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 8802] gi|218167417|gb|ACK66154.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 8801] gi|256590169|gb|ACV01056.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 8802] Length = 393 Score = 110 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 44/359 (12%), Positives = 122/359 (33%), Gaps = 21/359 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPT 59 + + Y+ I F + + + + V+ S + + LKI +P Sbjct: 18 LSIMDRYLFIEILLPFFFGMGIFTSLGVAIGTLFDLVRRVTESGLLITVALKILVLKMPG 77 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + + P + + ++ ++EL+ + + G S L+ P + ++L++ FI + Sbjct: 78 FIVLAFPMAMLLAALMAYSRLSSDSELIAMRSLGISIYRLVIPAILFSLLVTGLAFIVND 137 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI-------------KISKYNP 166 I P KA S+ E+ + + ++ Sbjct: 138 WIAPAATHEAAVTLEKAVSKERPSFAEQRNIIYPEYRIIQQEDGKETTVLSRLFYAENFN 197 Query: 167 NNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSY 226 ++ + I+D ++I +QS + ++ + +G ++ +P +I++F+ Sbjct: 198 GEEMEELTILDRSQEDVNQIVTSQSATWNVAQNTWDFFNGTIYIIAPDGSYRNIVRFQHQ 257 Query: 227 TLQTE--SANSSTIVLKANDQNLSFLLNPNP-NNPNYRPELLETYRSEFHKRLTQWLFPV 283 L+ + + + +++ + E + ++ + Sbjct: 258 QLKLPRAPLDLANRRQNFTEMSIAQTKEYLEVMKLSGNKERVRKVEVRIQEKYALPFVCL 317 Query: 284 IFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 +FGL+ + + I + + F ++ S++ + P L + Sbjct: 318 VFGLVGAAMGVRPQNT---SRATSFGICVGLIFS-YYLLSFVTSSLGIWGILTPFLAAW 372 >gi|294637822|ref|ZP_06716094.1| membrane protein, YjgP/YjgQ family [Edwardsiella tarda ATCC 23685] gi|291089021|gb|EFE21582.1| membrane protein, YjgP/YjgQ family [Edwardsiella tarda ATCC 23685] Length = 356 Score = 110 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 48/353 (13%), Positives = 119/353 (33%), Gaps = 2/353 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI R I + +M+ +V ++ +I+ + ++ V S+ + IP + + Sbjct: 5 LDRYIGRTIFNTIMMTLFMLVSLSGIIKFVDQLRKVGQGDYSVAGAGLFTLLSIPKDIEI 64 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ G +R+ + V+ AI L + + P Sbjct: 65 FFPMAALLGALLGLGMLAQRSELVVMQAAGFTRMQVASAVMKTAIPLVLLTMAIGEWVAP 124 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+ Q+ + + D + +I IS+ + TL G+ I D + Sbjct: 125 QGDQAARNYRAQ-QMYGGSLLSTQGGLWAKDGNQFIYISQVVNDRTLAGVSIYTLNDQRK 183 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 + + +Q + E + +P S + + + + Sbjct: 184 LTSLRYATAATFDGKQWKLTQVEESNLTNPEQITGSRTLTGVWKTNLTPDKLGVVAVSPD 243 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 ++S L + + Y+ ++ L + L+++ Sbjct: 244 SLSISGLYH-YVKYLQQSGQESNRYQLNLWSKIFAPLSVAVMMLMALSFIFGPLRSVPMG 302 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 I F V + + P I + ++ L++++ Sbjct: 303 VRVLTGICFGFVFYVLDQIFGPMSLVYNVPPVIGAVLPSALFLAISIYLLLRR 355 >gi|270265133|ref|ZP_06193396.1| hypothetical protein SOD_k01710 [Serratia odorifera 4Rx13] gi|270041067|gb|EFA14168.1| hypothetical protein SOD_k01710 [Serratia odorifera 4Rx13] Length = 356 Score = 110 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 45/354 (12%), Positives = 113/354 (31%), Gaps = 2/354 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ + ++ V S + +P + + Sbjct: 5 LDRYIGKTIFNTIIMTLFMLVSLSGIIKFVDQLRKVGQGDYSALSAGMFTLLSVPKDIEI 64 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 65 FFPMAALLGALLGLGQLATRSELVVMQASGFTRMQIAGSVMKTAIPLVLLTMAIGEWVAP 124 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + + Q+ +N + D + +I I + L G+ I D + Sbjct: 125 QG-DQMARNYRAQQMYGGSLLSTKNGLWAKDGNDFIYIERVAGEKELSGVNIYHFNDQRR 183 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 + + + D + + + + + L Sbjct: 184 LETVRYAATASFEDGVWKLSQVDTSDLTNEKQVTGTQTLTGEWKTNLTPDKLGVVALDPT 243 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 ++S L N + Y+ ++ L + L+++ Sbjct: 244 SLSISGLHN-YVKYLKQSGQEANRYQLNMWSKVFSPLSVAVMMLMALSFIFGPLRSVPMG 302 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P + L + + +++K+K Sbjct: 303 VRVVTGISFGFLFYVLDQIFGPLSLVYNMPPVLGALLPSMLFLLISVYMLLKRK 356 >gi|253583477|ref|ZP_04860675.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725] gi|251834049|gb|EES62612.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725] Length = 358 Score = 110 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 47/359 (13%), Positives = 121/359 (33%), Gaps = 5/359 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YIL + L FI + I+ + + S+ +++I + +P + Sbjct: 1 MKIIEKYILEEVKMPILFGISLFTFIFLIDIIVAMMENIIVKGISIIDIMRILSFYLPPI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + + R +E + + G ++KP+ LA + ++F+F + Sbjct: 61 LSQTIPMGIFLGVMLTFSKFTRTSESTAMSSIGMDLREIVKPIFILACITTLFIFFLQES 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P+ + ++ ++ K L+E F D+ + I + + + ++ +D Sbjct: 121 IIPRSFTKLQYITTKIAYENPVFQLKEKTFIDEVDEYNLYIDRIEGKDRIAQGVLIFQKD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSSTI 238 ++++ D + + K+ +F + + Sbjct: 181 EDVEFPTVLVGKEAYWKDSSMVITDSKFYDFDKDGKEKLRGEFDDKKVPLTAYFDGIDIK 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 V ++S L+ P Y+ E +++L L ++ L+ + + Sbjct: 241 VKDIEAMSISMLMKEMKELPKNEKIP---YKVEINRKLALPLSTIMLSLLGVFISIGHHR 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + + ++ + P+ + + + + K + Sbjct: 298 SGKGANFALSLAVIFSYITFLNIGMVMANRGKVPPFIGVWTPNIILFLVTFYFYKKKSR 356 >gi|24372947|ref|NP_716989.1| hypothetical protein SO_1369 [Shewanella oneidensis MR-1] gi|24347090|gb|AAN54434.1|AE015581_1 conserved hypothetical protein [Shewanella oneidensis MR-1] Length = 370 Score = 110 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 62/371 (16%), Positives = 134/371 (36%), Gaps = 25/371 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R + ++ + ++ I ++ + S +++ + G +P ++ Sbjct: 2 IVFRYLIREVLKAQIAVLFVLLTIFISQHFVRILADASDGEFPASLIATLIGLNLPYLVV 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + M E++I+ G S + + L LA++ +F + Sbjct: 62 LVLPLSLFLGILMAHGRMYAENEMVILHGVGVSEWYVTRVTLILAVINMLFTGYLSLYVA 121 Query: 123 PKCRSTIKQLSAKAQLAL-TFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P Q+ KAQ + ++ + + + + +N L+ +F+ D Sbjct: 122 PWAEEQQNQVLEKAQSEAGLAALVQGRFQASPNGRAVLFVERIGKDNELEKVFVAQLPDP 181 Query: 182 QTHKIYYA-------QSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + Q + LNDG ++ SP KD +++F Y +Q + Sbjct: 182 NDEIGLTNVVVAKGGRVIEDQNGSQQLQLNDGVRYQGSPQQKDYQMIEFGGYKMQIKEQQ 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 K + L LL +EFH RL L I LI++ A Sbjct: 242 VDERRRKLSALPLGELL----------KIDGPEAVAEFHWRLAIPLAIPIMTLIAVPLA- 290 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLL 352 + ++ K + ++ + G F + P Y+ + ++ L + LL Sbjct: 291 --RVNVRQGKFAKMLPAVLLYLGYFGLMVAGRKALQDGVIPLYLGMWWIHLSALIMGILL 348 Query: 353 MIKKK--YTKI 361 + K + +T++ Sbjct: 349 LGKDRPLFTRL 359 >gi|325279695|ref|YP_004252237.1| permease YjgP/YjgQ family protein [Odoribacter splanchnicus DSM 20712] gi|324311504|gb|ADY32057.1| permease YjgP/YjgQ family protein [Odoribacter splanchnicus DSM 20712] Length = 359 Score = 110 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 52/363 (14%), Positives = 119/363 (32%), Gaps = 7/363 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 MK +LYI+R +F S + I+ I V + +++ + + I+ IP Sbjct: 1 MKKLDLYIIRKFLGTFFFSLVLILCIVVVFDLSEKLEKFLENEAPVKAIVFDYYKNFIPY 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + + + + M ++E++ I +TG S + P L A +++I F+ Sbjct: 61 FANVFSSLFTFISVIFFTSKMAYDSEIIAILSTGISFRRFLFPYLMSATVIAILSFLLGA 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 I P + + + + S +N I + R Sbjct: 121 FIIPNANEKRIEFEKQYMGKRYANKEQNIHRQIAPGTYIYMSSYSVASNVGYDFSIENFR 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + D + + ++++ ++ + + + + + + S Sbjct: 181 GDTLVNKLTSSRITWDKENKKWVIHNWKLREIEGDKETYTTGQKLDTVMAFQPSEFSENP 240 Query: 240 LKANDQ-NLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 K +Q L + ++ E +K + I I + + Sbjct: 241 KKIREQLTFPELDRYIDRMKMRGSSNVIEFQIEKYKMIANAFATFILTFIGVSI---SSR 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF-CISSIFLLMIKKK 357 + + I L ISF + F N P+L ++L + +I + + + Sbjct: 298 KIRGGMGLHLGIGLLISFS-YILFMQFSTVFATNGNMNPLLAVWLPNILFAIIGVFVYRT 356 Query: 358 YTK 360 K Sbjct: 357 APK 359 >gi|213962435|ref|ZP_03390697.1| permease YjgP/YjgQ family protein [Capnocytophaga sputigena Capno] gi|213954761|gb|EEB66081.1| permease YjgP/YjgQ family protein [Capnocytophaga sputigena Capno] Length = 358 Score = 110 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 43/360 (11%), Positives = 118/360 (32%), Gaps = 3/360 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL+ +F + + + I ++ + ++++ + +N +L I Sbjct: 1 MKILDWYILKRYLLTFFIMIVLFIPIGIIVDLSEKVDKMIERKAPMNEILWYYLSFIVYF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + + + NTE++ I ++G S + ++P + A ++S+ +F Sbjct: 61 ANILFPILLFLSIIWFTSKLANNTEIIAIQSSGVSYMRFLRPYIVGASIISVIVFFMGMF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + K + + + D+D S + Sbjct: 121 IVPAASTVYNDFWNKYIRSSKVESVSDLYNQFSDNDYLYVSSFNYQEQKGYNFSVEHFDG 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + A++ + L + + + + + + Sbjct: 181 IKMKEKINAETIQWIDSTKTYRLTNYSKRKIGEGDDILVKRDQLDTIFNFKPDDLMPMEY 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 A ++NL L L Y ++R I LI + ++ + Sbjct: 241 TAENKNLFELNKFIEREKMKGSPNLNMYLLVKYRRWGAISTAFILTLIGVAV---SSVKK 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + + + + + F + + + P++ + L + + L ++ + + Sbjct: 298 RGGMGINLMVGVVVGFSFVFFDRVFGTLAQTSGGLSPLMAVVLPNLIFLTLAILLLRKVR 357 >gi|317046772|ref|YP_004114420.1| permease YjgP/YjgQ family protein [Pantoea sp. At-9b] gi|316948389|gb|ADU67864.1| permease YjgP/YjgQ family protein [Pantoea sp. At-9b] Length = 358 Score = 110 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 42/357 (11%), Positives = 113/357 (31%), Gaps = 2/357 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI + I + +M+ +V ++ +I+ + ++ + + +P + Sbjct: 3 KVLDRYIGKTIFNTIMMTLFMLVSLSGIIKFVDQLRKTGQGAYTALDAGYYTLLSVPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ + +EL+++ +G +R+ + V+ AI L + + Sbjct: 63 EIFFPMAALLGALLGLGNLAQRSELVVMQASGFTRMQVALAVMKTAIPLVLLTMAIGEFV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + A+ + L+ + + N S Sbjct: 123 APQGEQMARNYRAQQLYGGALVSTQNGLWAKDGNSFIYIERIKGDNQIDGVSIYNFSEQR 182 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK-SYTLQTESANSSTIVL 240 + + YA + + D ++ +L+ + + + + L Sbjct: 183 RLLSVRYAATATWDNAKKLWVLSQVDESDLKDAKQITGSQSLSGEWKTNLTPDKLGVVAL 242 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + ++ L N + Y+ ++ Q L + L+++ Sbjct: 243 DPDALSIRGLYN-YSKYLKQSGQEAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSV 301 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P + + + LM+K++ Sbjct: 302 SMGVRVVTGISFGFLFYVLDQIFGPLSLVYGIPPILGAVLPSAAFFAISLFLMLKRR 358 >gi|331007487|ref|ZP_08330658.1| putative permease [gamma proteobacterium IMCC1989] gi|330418711|gb|EGG93206.1| putative permease [gamma proteobacterium IMCC1989] Length = 408 Score = 110 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 46/370 (12%), Positives = 127/370 (34%), Gaps = 25/370 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + ++ ++ I + ++ + ++ +L + Y +P + Sbjct: 30 IIPRYLTKEVLQTTFAVTSVLLIIIMSGRFVKYLAEAAAGKIDARVLFAVMFYRLPGFME 89 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + + ++E+ ++ + G SR LI A ++ I + + Sbjct: 90 LILPLGFFVSILLAYGRLYTDSEMTVLFSCGVSRKQLIAWTYIPAGIVLIIIATLSLWLT 149 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEE-NLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P +++ A+ Q F ++E + L + N F + + + Sbjct: 150 PLGLHEAEKILAQQQARNDFETMQEARFQVSRNKSLVSYTEDISDNREQLNAFFLANMNV 209 Query: 182 QTHKIYYAQSGSIDL-------DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA- 233 + + D++ ++L G + P + + I +F+ + + Sbjct: 210 GADEPLMTVRSEVAEYKILGETDQRYLVLKRGARYEGQPGTANYRITEFEEFGQHVDPKG 269 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + K N LL L Y++ RL+ L +I L+ ++ Sbjct: 270 EIAVTNNKVNRLPTVELL----------GSDLPDYQAALQWRLSSPLVVLIVTLLGVLF- 318 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-PYYIPILYLFLFCISSIFLL 352 +R + +F ++ + + +E+ L+ F + + Sbjct: 319 --SHTNPRRGRYAMLFPAILLYLIYLVLLNSARGAVEEQRLSSAIGLWGVHFMFFVLTIS 376 Query: 353 MI--KKKYTK 360 ++ K+++ + Sbjct: 377 LLADKQQWKR 386 >gi|261211062|ref|ZP_05925351.1| predicted permease [Vibrio sp. RC341] gi|260839563|gb|EEX66174.1| predicted permease [Vibrio sp. RC341] Length = 366 Score = 110 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 55/357 (15%), Positives = 118/357 (33%), Gaps = 19/357 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + ++ + S +++L I G +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASDGEIPTSMILSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LA++ + + + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + QL + + L++ F R D + N L +F+ Sbjct: 122 PWSQDKEAQLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLHNVFVAQLAPRD 181 Query: 183 T-----HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + RQ I L DG + P D I F SY + Sbjct: 182 SVLPSVMFSNSGAVKELSDGRQIITLYDGTRYEGVPTRVDYMITNFDSYDGLIGQREVKS 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 LL ++E RL+ V L++++ A Sbjct: 242 TGRDWEALPTLSLL----------KNADRQAQAELQWRLSL---VVCIPLLTMLVVPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + ++ + + ++ I F S I ++ I+ L+ + +F +I Sbjct: 289 VNPRQGRFAKMGPAILIYLTYFLTLSATKSAI-EDGSLPVIIGLWPVNAALLFAALI 344 >gi|315179053|gb|ADT85967.1| hypothetical permease [Vibrio furnissii NCTC 11218] Length = 367 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 46/346 (13%), Positives = 114/346 (32%), Gaps = 19/346 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L + + + ++ + S ++L I G +P + Sbjct: 2 IIVRYLIRETLKSQLAIFFVLFLVFLSQKFIRVLADASDGEIPARLILSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+L I+ S + + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLGIITSCLAGFNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + ++ + + + L++ F R D + N L +F+ + Sbjct: 122 PWSQDKVQSVMEQLAAENSVDLLQKGQFQRSPDGSSVVFIDNIENKKLSNVFVAQLTPRE 181 Query: 183 THKIYYA-----QSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + RQ I + +G + P D + KF Y Sbjct: 182 SILPSVMFSDAGDVKELSDGRQVITMYNGTRYEGVPTRVDYMVTKFDEYEGLIGQRAVKE 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 L+ + ++E R++ V L++++ A Sbjct: 242 KGRDWEAIPTLELV----------KNADRSAQAELQWRISL---VVCIPLLTMLVVPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 + ++ + + ++ I F S + ++ I+ ++ Sbjct: 289 VNPRQGRFAKMGPAILIYLTYFLAISATKSAL-EDGSIPAIVGMWP 333 >gi|89070357|ref|ZP_01157664.1| putative permease [Oceanicola granulosus HTCC2516] gi|89044004|gb|EAR50179.1| putative permease [Oceanicola granulosus HTCC2516] Length = 366 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 39/365 (10%), Positives = 100/365 (27%), Gaps = 14/365 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTES-LNILLKISGYLIPTVL 61 Y R SFL + + ++++ N VS + + +L ++ P L Sbjct: 2 ILHRYFARRYLTSFLTVSGLFFVLLGAMDLVEQANEVSDEAAARWSDVLALTLLNAPASL 61 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + T + + R++EL++ G S + + + + L+ N + Sbjct: 62 YEILPLLVILSTIALFLGLARSSELVVTRAAGRSALHALVAPVLVVALIGAVALAVLNPL 121 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFR------LDDDLYIKISKYNPNNTLQGIFI 175 + + + + + L G+ Sbjct: 122 VAATSKEYEARVSALEDRGASIVSVDAGGLWLRQGGPEGQSVIRAARANTDGTELSGVTF 181 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK--SYTLQTESA 233 + + + ++ + + + +A Sbjct: 182 ITFAEEGRPSRRIDARRARLEAGVWRLVEAKSWPLGDAGVPEAAAEEHDVYEVATSLTAA 241 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + + L + ++ L + F V LI Sbjct: 242 QIRDSFGAPSSIPIWELPR-FIDRLQTAGFSARRHQVWLQTELAKPAFLVAMLLIGAAF- 299 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFL 351 R + +++ +SFG+++ ++ Q P + L I++ Sbjct: 300 -TMRHQRGGRTGLMALVAILLSFGLYFLRNFAQILGENGQIPVLLAAWAPPLAGIAASVA 358 Query: 352 LMIKK 356 L++ K Sbjct: 359 LLLHK 363 >gi|148242360|ref|YP_001227517.1| permease [Synechococcus sp. RCC307] gi|147850670|emb|CAK28164.1| Predicted permease [Synechococcus sp. RCC307] Length = 403 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 40/359 (11%), Positives = 116/359 (32%), Gaps = 19/359 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQ-ILQRINLVSSSTESLNILLKISGYLIPTVL 61 + ++ + L + + + + + V+ + + + +++ +P L Sbjct: 32 LMDRWLTGELLGPLLFGIAAFTAVTLSVGVLFELVRKVAEAGLPMGVAVQVLFLRLPGFL 91 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + T + ++ +EL + + G + + P L LA L+S+ F+ +++ Sbjct: 92 VLSFPMATLIATLLAYSRLSGGSELTALRSIGVATYRFVIPGLVLAGLMSVLTFVFNDVL 151 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI------------KISKYNPNNT 169 P + K+ S N+ + + +K + Sbjct: 152 VPPANRAGYVMLHKSLGRSIDSEKGGNIIYPRYGRVTDGPKDNKERLIQLFYAKEFKDGK 211 Query: 170 LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ 229 + + ++D ++ A+ R G + + + F +Y Sbjct: 212 MMDVTLIDFSRAGQKQLLSAEEAVFMEGRGTWEFRRGSIINVADRGGRNTTADFNTYYYP 271 Query: 230 TE--SANSSTIVLKANDQNLSFLLNP-NPNNPNYRPELLETYRSEFHKRLTQWLFPVIFG 286 + +++ N +++ + R ++ + ++FG Sbjct: 272 LGEGPLDLASLPKDVNVMSVAEANQALEIIEEAGDRKAARKMRVRLQEKFSFPAICLVFG 331 Query: 287 LISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC 345 LI A+ + + IS+ + F V++ +++ + P L + Sbjct: 332 LIG--ASLGSRPNTRTSRSQGFGISVLLIF-VYYLLAFVFSSLGVKGTLTPFLSAWTPV 387 >gi|330811513|ref|YP_004355975.1| permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379621|gb|AEA70971.1| Putative permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 353 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 52/357 (14%), Positives = 111/357 (31%), Gaps = 6/357 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + L I+ +A + + ++ V S T +L + P Sbjct: 1 MVKLDRYIGSSVFMAILAVLGIILGLATLFAFIDEMSDV-SDTYTLTDVASYVLLTAPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L S+ N+EL I+ G S ++ V+ ++L + + Sbjct: 60 LYDMLPMAALIGCLIGLGSLASNSELTIMRAAGVSIGRIVWAVMKPMLVLMLVGVLIGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P +T + + AQ + L+ R D+ S Sbjct: 120 IAPATENTAQANRSLAQGGGDAQSAKHGLWHRQGDEFIHINSVQPNGILYGVTRYRFDDQ 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 +A+ + D L+D ++ + + + ST+V+ Sbjct: 180 RHMLSSSFAKRANFAED--HWQLSDVTTTLFHDKRTEVVAAPQERWDVSISPQLLSTVVM 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 +++ L + + Y F ++ Q L L++I R Sbjct: 238 APESLSITGL-WGYIHYLADQGLNNGRYWLAFWVKVLQPLVTAALVLMAISFIFGPL--R 294 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 +F + + F + + L I ++ L + ++ Sbjct: 295 SVTLGQRVFTGVLVGFTFRIAQDLLGPSSLVFGFSPLFAVLVPAGICALAGLWLLRR 351 >gi|240948567|ref|ZP_04752940.1| permease, inner membrane protein yjgQ [Actinobacillus minor NM305] gi|240297075|gb|EER47646.1| permease, inner membrane protein yjgQ [Actinobacillus minor NM305] Length = 360 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 55/360 (15%), Positives = 120/360 (33%), Gaps = 9/360 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E YI + I + ++ +V + +I+ ++ V + + + IP Sbjct: 6 MNVLERYIGKTILSAIFLTLFLLVGLGAIIKFVEEFKAVGKGSYDALLAAYYTFLTIPRD 65 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + L ++ +EL+++ +G SR + V+ A+ L +F I Sbjct: 66 VETFFPIAALLGSLLGLGNLASRSELVVMQASGFSRFRIGLAVMKTAVPLILFTMIIGEW 125 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + + F+ D + ++ I + L + I Sbjct: 126 GVPQT-EQYARDMRSVAQSGGSMLSTSGGFWARDGENFVYIRRIGSETQLNNLSIYHFDK 184 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + I A D + IL E S S K + + + + L Sbjct: 185 KELKSITQAAEAKYTND--SWILKKVEKSTIEGNSIKQSKEKDQPWQTSITPSKLGIVSL 242 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K +++ L + + + + F +++ Q + + L++I R Sbjct: 243 KPESLSITGLAD-YVGFLKETGQDPKRFEITFWRKVYQPISMAVMMLLAISFIFGPL--R 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI---PILYLFLFCISSIFLLMIKKK 357 I I + F + + + L L C+S ++ L+ KK+ Sbjct: 300 SSTMGAKIVIGIVAGFMFYVANIVFGNMSLIATWLPVSIGALIPSLICLSIVWWLLTKKR 359 >gi|113971161|ref|YP_734954.1| permease YjgP/YjgQ family protein [Shewanella sp. MR-4] gi|117921444|ref|YP_870636.1| permease YjgP/YjgQ family protein [Shewanella sp. ANA-3] gi|113885845|gb|ABI39897.1| permease YjgP/YjgQ family protein [Shewanella sp. MR-4] gi|117613776|gb|ABK49230.1| permease YjgP/YjgQ family protein [Shewanella sp. ANA-3] Length = 370 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 61/371 (16%), Positives = 135/371 (36%), Gaps = 25/371 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R + ++ + ++ I ++ + S +++ + G +P ++ Sbjct: 2 IVFRYLIREVLKAQIAVLFVLLTIFISQHFVRILADASDGEFPASLIATLIGLNLPYLVV 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + M E++I+ G S + + L LA++ +F + Sbjct: 62 LVLPLSLFLGILMAHGRMYAENEMVILHGVGVSEWYVTRVTLILAVINMLFTGYLSLYVA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI-----VD 177 P Q+ KAQ + L + F + + + + Sbjct: 122 PWAEEQQNQVLEKAQSEAGLAALVQGRFQASPNGRAVLFVERIGKDNDLDKVFVAQLPDP 181 Query: 178 SRDTQTHKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + + + A+ G + D+ Q + LNDG ++ SP KD +++F Y +Q + Sbjct: 182 NDEIGLTNVVVAKGGRVLEDQNGSQQLQLNDGVRYQGSPQQKDYQMIEFGGYKMQIKEQQ 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 K + L+ L+ +EFH RL L I LI++ A Sbjct: 242 VDERRRKLSALPLTELM----------KVEGPEAVAEFHWRLAIPLAIPIMTLIAVPLA- 290 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLL 352 + ++ K + ++ + G F + P Y+ + ++ L + LL Sbjct: 291 --RVNVRQGKFAKMLPAVLLYLGYFGLMVAGRKALQDGVIPQYLGMWWIHLSALIMGILL 348 Query: 353 MIKKK--YTKI 361 + K + + ++ Sbjct: 349 LGKDRPLFARL 359 >gi|260772183|ref|ZP_05881100.1| putative membrane protein [Vibrio metschnikovii CIP 69.14] gi|260613050|gb|EEX38252.1| putative membrane protein [Vibrio metschnikovii CIP 69.14] Length = 356 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 46/355 (12%), Positives = 119/355 (33%), Gaps = 2/355 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I + + + V ++ +I+ ++++ V + L L +P + Sbjct: 3 KILDWYIGRTIIATTTLVLVTFVGLSGIIKYVEQLRKVGDGSYDLLQALFFVLLSVPRDV 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L ++ ++EL+++ +G S++ + VL AI L I + + Sbjct: 63 EMFFPMAALLGALIGLGALAASSELVVMQASGFSKLDIGLSVLKTAIPLMIIVTLLGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + + + + D + +I ++K + Sbjct: 123 APQAQ-KMARDMRAFATSGGNILSVRTGVWARDANDFIFVAKIDNERLYGLNMWRFDEQK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 Q + +A+ D ++ + + + + + + +K Sbjct: 182 QLRHVVFAEQVDYLGDNHWLMKQVQITDLQDNVVLTKQYLDVYQWRTALAPDKLAVVTVK 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + LS L + + + Y ++LTQ + L+++ Sbjct: 242 PEELALSGLYD-YVHYLKASEQDASRYELALWRKLTQPFSIGVMMLMALSFIFGPLRSVT 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + +F + F + + P + L ++ +L+ +K Sbjct: 301 MGARILSGVIAGFTFYISSEFFGPLSLVYGFPPAFGAIAPSLVFLTIAVMLLRRK 355 >gi|70728450|ref|YP_258199.1| hypothetical protein PFL_1068 [Pseudomonas fluorescens Pf-5] gi|68342749|gb|AAY90355.1| membrane protein, putative [Pseudomonas fluorescens Pf-5] Length = 353 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 46/357 (12%), Positives = 109/357 (30%), Gaps = 6/357 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + L I+ +A + + + + T ++ ++ P Sbjct: 1 MVKLDRYIGSSVFMAILAVLGIILGLASLFAFIDEMG-AVNETYTVVDVMSYVALTAPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + L S+ N+EL I+ G S ++ V+ ++L + + Sbjct: 60 VYEMLPMAGLIGCLIGLGSLASNSELTIMRAAGVSVGRIVWAVMKPMLVLMLVGVLVGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A AQ + + L+ R D+ + Sbjct: 120 VAPATETQAQASRALAQGSGDAQSSKHGLWHRQGDEFIHINAVQPNGLLYGVTRYHFDDQ 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 +A+ D L D ++ + + + + ST+V+ Sbjct: 180 RHMLSSSFARQARFHED--YWQLTDVTTTYFRDGHTEVISVPGERWDVALSPQLLSTVVM 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 ++S L + + Y F ++ Q L L++I R Sbjct: 238 APESLSISGL-WGYIHYLADQGLNNGRYWLAFWVKVLQPLVTAALVLMAISFIFGPL--R 294 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 +F + + F + + L I ++ + + ++ Sbjct: 295 SVTLGQRVFTGVLVGFTFRIAQDLLGPSSLVFGFSPLFAVLVPAGICAVAGVWLLRR 351 >gi|255536554|ref|YP_003096925.1| hypothetical protein FIC_02430 [Flavobacteriaceae bacterium 3519-10] gi|255342750|gb|ACU08863.1| membrane protein, putative [Flavobacteriaceae bacterium 3519-10] Length = 364 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 52/365 (14%), Positives = 120/365 (32%), Gaps = 12/365 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILL-KISGYLIPT 59 MK +L+I++ +F + I +I + + + S+ S+ L Y I Sbjct: 1 MKIIDLHIIKKYLGTFAFMLGLLTLIVLIIDVQAKAPRIESNGFSVTEFLINFYPYWIVN 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ + + M NTE++ I ++G S +P L + ++ + + Sbjct: 61 LIITFMSILVFISVIFFTSRMANNTEIVAIISSGASFHRFARPYLITSSFIAAIALLLNH 120 Query: 120 IIEPKCRSTIKQL--SAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD 177 + P +L + + +L YI I YN F+ Sbjct: 121 FVLPLANVKKNELEPYTYTAKSREEYIGNTEVSTQLSKSEYIFIKSYNRKERRGSGFMYQ 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 D Y + D + K+ + + ++ Sbjct: 181 KFDKNRKLTYQIIANEFSWDDKKSHFILNSYLEKTVRKDETEKLGSGDTMTKSFGHPPEE 240 Query: 238 IVLKA---NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + ++ L+ L Y++E H+R + + +I + + A Sbjct: 241 LFPGVLLGQNKTTPDLIGFIDREKEKGNANLGNYQNELHQRTSMPVSVIILTFLGLSLA- 299 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--FCISSIFLL 352 + ++ + I +S++F + F + + +N P+L ++L + L Sbjct: 300 --SQKKRGGLGMNLAIGISLAFVFVFSFEAL-KVVSKNQSLPPLLAMWLPNLIFGPVALY 356 Query: 353 MIKKK 357 + K+ Sbjct: 357 LYLKR 361 >gi|167856192|ref|ZP_02478929.1| hypothetical protein HPS_08251 [Haemophilus parasuis 29755] gi|167852681|gb|EDS23958.1| hypothetical protein HPS_08251 [Haemophilus parasuis 29755] Length = 355 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 111/357 (31%), Gaps = 4/357 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E YI R I S +++ +V + +I+ ++ V + + +P Sbjct: 1 MNVLERYIGRTILASIMLTLFMLVGLGAIIKFVEEFRSVGRGSYDGLHAAYYTLLTMPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + L + +EL+++ + G SR + V+ AI L + I Sbjct: 61 IETFFPIAALLGSLMGLGGLASRSELVVMQSAGFSRFRIGLAVMKTAIPLMVLTMIMGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + + + F+ D + +I I + L I I + Sbjct: 121 GVPQT-EQYARNMRSIAQSGGSMLATQGGFWAKDGNDFIYIRQIQDERNLNNILIYQFDN 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 I A+ + Q +L + + +++ + L Sbjct: 180 QVLKSIKQAEKATY--SEQGWLLQKVDKSEIHESGITQTRETDQTWKTSITPSKLGIASL 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K ++S L + + + + F +++ Q + + L++I Sbjct: 238 KPESLSISGLAD-YVGFLKDTGQDPKRFEITFWRKVFQPISMAVMMLLAISFIFGPLRSS 296 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I I F V + + + S+ ++ KK Sbjct: 297 TMGAKIVIGILTGFVFYVANIVFGNLSLVVSWLPVPIGALIPSLLCLSVVWWLLNKK 353 >gi|317486218|ref|ZP_07945052.1| permease YjgP/YjgQ family protein [Bilophila wadsworthia 3_1_6] gi|316922517|gb|EFV43769.1| permease YjgP/YjgQ family protein [Bilophila wadsworthia 3_1_6] Length = 357 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 42/355 (11%), Positives = 109/355 (30%), Gaps = 7/355 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+ + L + + + + + +R++ + S+ ++L +P V Sbjct: 1 MSLLFRYLTKNNAMILLPTLAVGIGLYVLTDLFERLDNFIEAGLSVGMVLTYFVVKMPLV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P F + T L M R+ EL + G S + ++ I Sbjct: 61 ISQILPVIFLLSTVIQLCIMARSRELTALQAGGISLGVVANSMILCGIFWGGVQLGFSEY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + ++ + + + D D + + +P G + D Sbjct: 121 LGVAGERESARIWQEEVRKKNLAATVLKDVWFTDGDWIVSLGTLDPQAHGTGFSGYELSD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 Q+ + + L D V+ +++ E+ + Sbjct: 181 DGLSIKRIVQASTFTAEPNHWALQDVRVYTPDTFTQEQEPDFVLPLRQDPETFRLVSTGT 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K L L + + +E R+ +H +L ++ ++ Sbjct: 241 KPQQLPLWQLGDA-ISQLKSSGSNVEALRTAWHAKLAYAASILVMAFVATAIV-----SW 294 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + ++L +F +++ + + Q P L + + ++F + Sbjct: 295 KDNIYIAVTVALLCTF-LYFAVYTLGTTLGQRGILHPFLAAWTANLIALFFAFWR 348 >gi|163803712|ref|ZP_02197572.1| putative permease [Vibrio sp. AND4] gi|159172495|gb|EDP57360.1| putative permease [Vibrio sp. AND4] Length = 366 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 45/357 (12%), Positives = 120/357 (33%), Gaps = 19/357 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + + + S ++ + G +P + Sbjct: 2 IIVRYLIRETLKSQFAIFFVLFLVFLSQKFISVLAKASDGDIPAGLIFSVVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+++++ TG L++ L LAI+ S + + Sbjct: 62 LMLPLSLYIGILITFGRLYAESEIVVMNATGIGNKFLVQAALCLAIITSGVAAFNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + ++QL + + + L++ F D + ++TL +F+ R Sbjct: 122 PWSQDRVEQLYDQVEAENSVDLLQKGQFQGTPDGSSVVFIDDIKDSTLSNVFVAQMRPRD 181 Query: 183 THK-----IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + + RQ I ++DG + P + + KF Y Sbjct: 182 SVLPSVMFSSSGEVKELSDGRQVITMHDGSRYEGVPTRVEYMVTKFDQYEGVIGQREVKQ 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 L+ ++E R++ + V L++++ A Sbjct: 242 KGRDWEAYPTLDLI----------GHPDPEAQAELQWRISLF---VCIPLLTMLVIPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + ++ + + ++ I F S +E+ + ++ + + ++ Sbjct: 289 VNPRQGRFAKMGPAILIYLAYFLAISATKSALEE-GTIPAAIGMWPINAMLLIVAIL 344 >gi|149190545|ref|ZP_01868815.1| predicted permease [Vibrio shilonii AK1] gi|148835669|gb|EDL52636.1| predicted permease [Vibrio shilonii AK1] Length = 356 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 45/357 (12%), Positives = 122/357 (34%), Gaps = 3/357 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + ++Y+ + I + ++ V ++ VI+ ++++ V + ++ L +P + Sbjct: 3 RILDVYVGKTIITTIILVLSVFVGLSAVIKFVEQLRSVGEGSYTMLSALYFVILGMPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + + + L + ++EL+++ G S++ + VL A+ L + + Sbjct: 63 ELFFSMAALLGSLVGLGMLASSSELVVMQAAGISKLRIGLSVLKTAVPLMVVVMALGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + + + N + D + +I ISK N + + Sbjct: 123 APTTQ-QMARDLRLQATSGGSIVSVRNGVWARDANDFIFISKVNGESVEGLNIWRFGENK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 Q + +A+S D + + K+ + + + + + + + Sbjct: 182 QLKETVFAESADYLGDNRWEMHRIQITDMKNDEALSKETLDKQVWETSLVPDKLAIVTVD 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 N+ LS L + Y F ++ TQ + + L+++ Sbjct: 242 LNELPLSGL-WDYTQYLKDSEQDASRYELAFWRKATQPISVAVMMLMALSFVFGPLRSVT 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + +F + F + + L +I +L++++K Sbjct: 301 MGARILSGVIAGFTFYISSEFFGPVSLVYGMSPLFGAL-GPSLVFLTIAMLLLRRKL 356 >gi|329962824|ref|ZP_08300709.1| permease, YjgP/YjgQ family [Bacteroides fluxus YIT 12057] gi|328529381|gb|EGF56294.1| permease, YjgP/YjgQ family [Bacteroides fluxus YIT 12057] Length = 378 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 57/363 (15%), Positives = 127/363 (34%), Gaps = 7/363 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 +K + YI++ +++ + I+ IA V ++++ S N I+ IP Sbjct: 20 LKRLDWYIIKKFLGTYVFAIALIISIAVVFDFNEKMDRFMSHEAPWNAIVFDYYLNFIPY 79 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + +TG S +++P + A +++I F + Sbjct: 80 FANLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMLRPYMVSAAIIAIVTFSLGS 139 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P+ T K + + + + + T + R Sbjct: 140 YVIPRGSVTRINFEDKYYKPRKANTARNIQLEVDSNVIAYIERFEDYSKTGYRFSLDKFR 199 Query: 180 DTQTHKIYYAQSGSIDLDR-QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 D Q A+S + D + D + + + I+ TL E A+ + Sbjct: 200 DKQLVSHLTARSITYDTASIHKWTIKDYMIREMDGMKESITKGDRIDTTLFMEPADFLIM 259 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + L ++ + E+HKR+ I LI + + Sbjct: 260 KNQQEMLTSPQLSEYIDRQRQRGFANIKEFEIEYHKRIAMSFASFILTLIGVSL---SSK 316 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF-CISSIFLLMIKKK 357 + + I L++SF + F I N P++ +++ + + + KK Sbjct: 317 KTKGGMGLHLGIGLALSFS-YILFQTIASTFAVNGNVPPVIAVWIPNVLYTFIAFYLYKK 375 Query: 358 YTK 360 K Sbjct: 376 APK 378 >gi|220935306|ref|YP_002514205.1| permease YjgP/YjgQ [Thioalkalivibrio sp. HL-EbGR7] gi|219996616|gb|ACL73218.1| permease YjgP/YjgQ [Thioalkalivibrio sp. HL-EbGR7] Length = 353 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 46/357 (12%), Positives = 118/357 (33%), Gaps = 5/357 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI R + L++ L + + + + ++ + + L + + +P Sbjct: 1 MKRLDAYIARNVMGGTLLAMLVLGGLDTLFAFIAELDEIGRNDYGLIQAVVYTALTVPRR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + + L ++ N+EL + G +++ VL +++ + + + Sbjct: 61 VYELFPTSVLLGSLLSLGALAANSELTAMRAAGVPIAGIVRSVLRAGLMMLVVVVLLGEA 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + K+Q + Y + D +I++ P+ L + I + Sbjct: 121 VAPMSEQR--AQTIKSQASGEEMYRGSAGLWAKDGQRFIQVGVVMPDLRLLDLSIYELDA 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + ++GS A IL D E + + + S + + Sbjct: 179 -ERRLSSMLRAGSASYQNGAWILRDIERSHLGEAGVTGEHVDEERWPRLLAPELFSVLAV 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + + L ++ F R T L ++ L+++ Sbjct: 238 EPRQMAATTL-AQYVTYLRENDLDSASFELAFWMRFTTPLSSLVMLLLAVPFVFGSLRTG 296 Query: 301 QRKKIHPIFISLSISFGVFW-GFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + I + + + F + +++ P L +F ++ L + Sbjct: 297 GAGQRLFIGLLIGVGFHLLNRTLNHMGLVYGLPPMLSATLPTLIFFAVAMLALRRVR 353 >gi|117925963|ref|YP_866580.1| permease YjgP/YjgQ family protein [Magnetococcus sp. MC-1] gi|117609719|gb|ABK45174.1| permease YjgP/YjgQ family protein [Magnetococcus sp. MC-1] Length = 371 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 41/365 (11%), Positives = 120/365 (32%), Gaps = 11/365 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 M Y+L+ + F+ + + +++ ++I + ++++ +P Sbjct: 1 MPILFRYLLQLFLQGFVKVFSIFIALFFLMDGAEQIRRFGGRDHVIWQDMVELIFLRMPH 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 P + T V+T + R EL +I + G S + ++ P L ++++ + + Sbjct: 61 FFTQFLPPIALLTTLFVVTRLTRLNELTVIRSGGVSLVRILIPFLLGGVMVAGVQMLLLD 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF----- 174 I P+ + ++ + L + E + + I + + Sbjct: 121 QIVPRTNAAAERSIFRMNLPEQAALYESMVSLEGVRKDNLWIRDGGQILHAKRAYGDKRL 180 Query: 175 ----IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT 230 + + + A + + + +L++G+++R + + + + Sbjct: 181 LLEVTIFRFTPEHDLLMRADAHKATWENEGWVLHNGQIYRFNGHTTQSEPFTRMPWAINL 240 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 E + + +L L + + Y +++L L + L++ Sbjct: 241 EKEQIKRATPQPEELSL-QALWKHADRLAREGYDATPYWVTLYRKLADPLTTLAAILLAF 299 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 A + + + + V + E+ P ++ +F I Sbjct: 300 PFALRLHRMGGTFRSMLMGFITGFFMFVVVDLFTALGFGERLPPFLAAFAPVMFFICIGG 359 Query: 351 LLMIK 355 L++ Sbjct: 360 FLLLH 364 >gi|224539916|ref|ZP_03680455.1| hypothetical protein BACCELL_04827 [Bacteroides cellulosilyticus DSM 14838] gi|224518470|gb|EEF87575.1| hypothetical protein BACCELL_04827 [Bacteroides cellulosilyticus DSM 14838] Length = 391 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 56/363 (15%), Positives = 126/363 (34%), Gaps = 7/363 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 +K + YI++ +++ + I+ IA V ++++ S I+ IP Sbjct: 33 LKRLDFYIIKKFLGTYVFAIALIISIAVVFDFNEKMDRFMSHEAPWKAIIFDYYLNFIPY 92 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + +TG S +++P + A +++I F + Sbjct: 93 FANLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMLRPYMVSAAIIAIVTFFLGS 152 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 I P+ T K + + + + T + + Sbjct: 153 YIIPQGSVTRINFEDKYYKQRKSNTARNIQLEVDSGVIAYIERFEDYSKTGYRFSLDKFK 212 Query: 180 DTQTHKIYYAQSGSIDLDR-QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 D Q A+S + D I+ D + + ++I TL E A+ + Sbjct: 213 DKQLVSHLTARSITYDTASVHKWIIKDYMIREMDGMKENIVKGDRIDSTLFMEPADFLIM 272 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + L ++ + E+HKR+ I LI + + Sbjct: 273 KNQQEMMTSPQLSEYISRQRQRGFANIKEFEIEYHKRIAMSFASFILTLIGVSL---SSK 329 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF-CISSIFLLMIKKK 357 + + I L++SF + F I N P++ +++ + + + +K Sbjct: 330 KTKGGMGLHLGIGLALSFS-YILFQTIASTFAVNGNVPPVIAVWIPNILYAFIAFYLYQK 388 Query: 358 YTK 360 K Sbjct: 389 APK 391 >gi|114048399|ref|YP_738949.1| permease YjgP/YjgQ family protein [Shewanella sp. MR-7] gi|113889841|gb|ABI43892.1| permease YjgP/YjgQ family protein [Shewanella sp. MR-7] Length = 370 Score = 109 bits (271), Expect = 7e-22, Method: Composition-based stats. Identities = 61/371 (16%), Positives = 136/371 (36%), Gaps = 25/371 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R + ++ + ++ I ++ + S +++ + G +P ++ Sbjct: 2 IVFRYLIREVLKAQIAVLFVLLTIFISQHFVRILADASDGEFPASLIATLIGLNLPYLVV 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + M E++I+ G S + + L LA++ +F + Sbjct: 62 LVLPLSLFLGILMAHGRMYAENEMVILHGVGVSEWYVTRVTLILALINMLFTGYLSLYVA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI-----VD 177 P Q+ KAQ + L + F + + + + Sbjct: 122 PWAEEQQNQVLEKAQSEAGLAALVQGRFQASPNGRAVLFVERIGKDNELDKVFVAQLPDP 181 Query: 178 SRDTQTHKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + + + A+ G + D+ Q + LNDG ++ SP KD +++F Y +Q + Sbjct: 182 NDEIGLTNVVVAKGGRVQEDQNGSQQLHLNDGVRYQGSPQQKDYQMIEFGGYKMQIKEQQ 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 K + +L+ L+ +EFH RL L I LI++ A Sbjct: 242 VDERRRKLSALSLADLM----------KVEGPEAVAEFHWRLAIPLAIPIMTLIAVPLA- 290 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLL 352 + ++ K + ++ + G F + P Y+ + ++ L + LL Sbjct: 291 --RVNVRQGKFAKMLPAVLLYLGYFGLMVAGRKALQDGVIPQYLGMWWIHLSALIMGILL 348 Query: 353 MIKKK--YTKI 361 + K + + ++ Sbjct: 349 LGKDRPLFARL 359 >gi|118580062|ref|YP_901312.1| permease YjgP/YjgQ family protein [Pelobacter propionicus DSM 2379] gi|118502772|gb|ABK99254.1| permease YjgP/YjgQ family protein [Pelobacter propionicus DSM 2379] Length = 359 Score = 109 bits (271), Expect = 7e-22, Method: Composition-based stats. Identities = 57/363 (15%), Positives = 143/363 (39%), Gaps = 10/363 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI R L+ + I V+ +++RI +L + + + +P + Sbjct: 1 MTIIDRYIAMTWLRLLLLCQGSFLSIYLVLDMMERIPRFLRVQGALVDIARFFAWKLPEM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + F M T L + R++E++ + + G S + P+L L +S+ L ++ + Sbjct: 61 IGQTAAFSVLMATLLTLGLLTRSSEIVAMRSCGISLPRISLPMLLLGGGVSLLLLVNAEL 120 Query: 121 IEPKCRSTIKQLSA-KAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 I P + ++ + + + N + D+ ++ ++P + + +V S Sbjct: 121 IVPDSYERMSRIERVDIKKQAGSAVFKRNNIWFRSDNRIMQARLFDPRSQVLRGVVVWSL 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-DISIMKFKSYTLQTESANSSTI 238 D T+ + + S +L ++ +L E+ + + + +S L + + + Sbjct: 181 DQYTNPLSRLDAESAELRGESWLLRGVELKEFTAGEGVVVRKLPTRSIDLNLKVDDLRVL 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 A++ + L +N YR+ H + L ++ ++ I A + Sbjct: 241 DKNADNLSFGKL-REYADNLRKGGYEDFKYRTMMHTKFAAPLSALVMVILGIPFALRG-- 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF----LFCISSIFLLMI 354 R + S++I F ++ + ++ ++ P++ + LF + ++L M Sbjct: 298 SRSGGVAMGVGASVTIGFA-YFVVNAVLLSYGRSGVLPPLVAAWGANFLFILGGLWLTMS 356 Query: 355 KKK 357 + Sbjct: 357 IRN 359 >gi|307129164|ref|YP_003881180.1| hypothetical protein Dda3937_01300 [Dickeya dadantii 3937] gi|306526693|gb|ADM96623.1| conserved inner membrane protein [Dickeya dadantii 3937] Length = 356 Score = 109 bits (271), Expect = 7e-22, Method: Composition-based stats. Identities = 43/356 (12%), Positives = 115/356 (32%), Gaps = 2/356 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + YI + I + +M+ +V ++ +I+ + ++ V S+ + +P + Sbjct: 3 RVLDRYIGKTIFNTIMMTLFMLVSLSGIIKFVDQLRKVGQGGYSVMGAGLYTLLSVPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ +EL+++ +G +R+ + V+ AI L + + Sbjct: 63 EIFFPMAALLGALLGLGTLATRSELVVMQASGFTRLQIAAAVMKTAIPLVLLTMAIGEWM 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + + + + D + ++ I + N L G+ I Sbjct: 123 APAG-EQMARNYRSQMMYGGSMLSTQGGLWAKDGNDFVYIQRVAGENELAGVNIYHFDKQ 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + ++ + + E + S + + L Sbjct: 182 SKLLSIRYAASALYENGTWKLSQVEESDLRDSKQIGGSQTVSGEWKTNLTPDKLGVVALD 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + ++ L + N + + Y+ +L L + L+++ Sbjct: 242 PDALSIRGLFD-YINYLHQSGQEASRYQLNMWSKLFAPLSVAVMMLMALSFIFGPLRSVP 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I IS F V + + P + + +L++K++ Sbjct: 301 AGVRIVIGISFGFLFYVLDQIFGPLSLVYHIPPVLGASLPSALFLFISIMLLLKRR 356 >gi|304382916|ref|ZP_07365398.1| conserved hypothetical protein [Prevotella marshii DSM 16973] gi|304335941|gb|EFM02189.1| conserved hypothetical protein [Prevotella marshii DSM 16973] Length = 402 Score = 109 bits (271), Expect = 7e-22, Method: Composition-based stats. Identities = 57/360 (15%), Positives = 118/360 (32%), Gaps = 8/360 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPTV 60 K + YI+R +++ + I+ I+ V + + + S L I+ +P Sbjct: 43 KRLDRYIIRKFIGTYIFAIALIISISIVFDVNENLAKFSEYKAPLKAIVFDYYMNFVPYF 102 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +P + + + N+E++ + G S LI+P +F +L+S F Sbjct: 103 ANLFSPLFVFIAVIFFTSKLAGNSEIISMLAAGISFRRLIRPYMFSCVLISGLSFYLSAY 162 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + E + N G + + Sbjct: 163 VIPHGTVIRQNFETLYKNKKKNTSAENVQLQVGKGVIAYMKLYDNTIKKGYGFCLYKFEN 222 Query: 181 TQTHKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A I + D ++ + + + I+ K LQ E + Sbjct: 223 KKLVSHMTASEIQYDTISDSKYHWKAMDWKIRQLRGLREKITSGITKDTVLQMEPTDLVY 282 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + LL+ + + Y+ E+HKR+ I +I + + Sbjct: 283 SKGQQETFTSPQLLDYISKQIDRGSGNVVQYQVEYHKRIASSFASFILTIIGVSL---SS 339 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 R+ + I L++SFG + + N PIL +L I F+ + Sbjct: 340 RKRKGGMGLYLGIGLALSFG-YIMLQTVSSTFAINANTPPILAAWLPNIIFAFVAYFCYR 398 >gi|159030859|emb|CAO88538.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 387 Score = 109 bits (271), Expect = 7e-22, Method: Composition-based stats. Identities = 36/364 (9%), Positives = 121/364 (33%), Gaps = 21/364 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y++ + FL S + + + N V + L L+I +P + Sbjct: 16 LIDRYLISQLLPPFLFSVGLFASLGVAISNLSDLANQVVDANLPLASALEILLLKVPEFV 75 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + T ++ ++E + + + G + L P L++++++ F+ + Sbjct: 76 TYSLPVSLLLATLITYGRLSSDSETVALQSCGVTLYRLFIPTFCLSLIVTVVTFLLNEYV 135 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI------------KISKYNPNNT 169 P ++ + + ++ ++ + + ++ Sbjct: 136 VPNANYRATEILVQKINKEANFWKNKDFYYPDYEIKTLENGTINRNLRSLFYAEQFDGEK 195 Query: 170 LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISI---MKFKSY 226 ++ + ++ + ++I A S + +G ++ +P + S K + Sbjct: 196 MKTVTVIRWLKEELNQIIIADSARWNAVDNVWDFFNGIIYELTPPNASYSQVIPFKTEKI 255 Query: 227 TLQTESANSSTIVLKANDQNLSFLLNP-NPNNPNYRPELLETYRSEFHKRLTQWLFPVIF 285 L + + + + N+ + + + + ++ +++ ++F Sbjct: 256 ALSRSAFDFARQSRDPYEMNIPQAIEYVQLLKLSGDEKRVRFFQVRIQQKIAFPFVCIVF 315 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC 345 I + + +S++I F +++ ++++ + P L +L Sbjct: 316 ATIGCALGSLPQRISRG---TSFGLSVAIVF-LYYLLNFLVGSLGLTATLSPFLAAWLPN 371 Query: 346 ISSI 349 Sbjct: 372 FFGF 375 >gi|209694120|ref|YP_002262048.1| putative permease [Aliivibrio salmonicida LFI1238] gi|208008071|emb|CAQ78212.1| putative permease [Aliivibrio salmonicida LFI1238] Length = 370 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 48/360 (13%), Positives = 121/360 (33%), Gaps = 22/360 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ +S L + I + +Q + S ++L + GY +P + Sbjct: 2 IIIRYLIKETLKSQLAIFFVLFLIFMSQKFIQILADASDGDIPGGLILSLVGYNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LA++ ++ + Sbjct: 62 LMLPLSIFIGILLTFGRLYAESEITVMNATGMGNSILIRAALYLALITGSIAAVNSLWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFR-LDDDLYIKISKYNPNNTLQGIFIVDSRD- 180 P + +L + L++ F D + I + + I ++ Sbjct: 122 PWSQEQSTKLMENVESDAGIELLQKGQFKPSPDGKAVVFIDDISDKGGKHLVNIFLAQPV 181 Query: 181 ------TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 +D RQ ++L++G + P D F+SY + Sbjct: 182 PNDSLRPSVLISEKGTVKQLDDGRQVLVLDNGTRYEGIPTRLDYLESNFESYEVLIGQKE 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + L+ ++E R++ + L+++V Sbjct: 242 VKEKRRDWDALPTLDLI----------KRTELEAKAELQWRISL---ILCIPLLTMVVVP 288 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFLLM 353 A+ ++ + + ++ + F S IE+ + + L+ + I +++ Sbjct: 289 LSAVNPRQGRFAKLAPAILLYLAYFLSLSAGKSAIEEGSLHPSVGLWAINAVLLIIGIIL 348 >gi|311281180|ref|YP_003943411.1| permease YjgP/YjgQ family protein [Enterobacter cloacae SCF1] gi|308750375|gb|ADO50127.1| permease YjgP/YjgQ family protein [Enterobacter cloacae SCF1] Length = 360 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 47/354 (13%), Positives = 117/354 (33%), Gaps = 2/354 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + LM+ +V ++ +I+ + ++ + + +P + + Sbjct: 7 LDRYIGKTILTTILMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDIQI 66 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 67 FFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVAISVMKTAIPLVLLTMAIGEWMAP 126 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + L A+A + ++ ++ + + + + + Sbjct: 127 QGEQMARNLRAQAMYGSSLLSTQQGMWAKDGHNYIYIERIKGADELGGISIYSFNDKRRL 186 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + YA S D D++ L+ + +P+ S ++ + L Sbjct: 187 QSVRYAASAKFDADKKVWRLSQVDESNLTNPLQITGSQTVSSTWKTNLTPDKLGVVALDP 246 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S L N + Y+ ++ Q L + L+++ Sbjct: 247 DALSISGLYN-YVKYLKSSGQDPGRYQLNMWSKVFQPLSVAVMMLMALSFIFGPLRSVPM 305 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 IS F V + + P + L LMI++ Sbjct: 306 GVRVITGISFGFVFYVLDQIFGPLTLVYGIPPIVGALLPSATFFLISLWLMIRR 359 >gi|332704119|ref|ZP_08424207.1| permease YjgP/YjgQ family protein [Desulfovibrio africanus str. Walvis Bay] gi|332554268|gb|EGJ51312.1| permease YjgP/YjgQ family protein [Desulfovibrio africanus str. Walvis Bay] Length = 396 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 53/358 (14%), Positives = 125/358 (34%), Gaps = 10/358 (2%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 ++ + + +F++ ++ + + ++LQ L + + + ++ YL P L ++ P Sbjct: 14 HVFKELLLTFIICLGSLLTLILIGRMLQLKELFLGQSLGVMEIGRLFFYLSPFFLQLLMP 73 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + ++ + EL+ + G S L+ + L + Sbjct: 74 ISCMLAIFLTFLRISSDRELIALKAGGVSLYKLLPSPVLFCCLCCVANLAVAFWGISWGM 133 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDTQTHK 185 + + T ++ F L I +Y+P N ++ IF+ DSR +T Sbjct: 134 DNFRAEVLEFARNRTQIMIQPGTFNSDFPGLTIFAEQYDPGNKEMRLIFVQDSRGDETSA 193 Query: 186 IYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQT--ESANSSTIV 239 A+ G + D++ +LNDG ++R + L Sbjct: 194 TIVAEKGRVVTDKERGRLQFLLNDGAIYRTAKDQVHTLKFVSYLVNLDIWKTFNAEQLSE 253 Query: 240 LKANDQNLSFLLNPNPNNPNYRPEL---LETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + ++ L + + + E KR T + ++ GL ++ A Sbjct: 254 TRPREMSIMNLRRLAADPDLAKKRDEDYVRKVNVEIQKRYTLPVACLVLGLFALPFACSF 313 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 V+Q + + + ++ + P+ L +F +S+IF + + Sbjct: 314 QGVKQYVGVLMALGMFIVYYSLYSISISLGESGFLAPWIGLWLPNVIFFVSAIFGIRL 371 >gi|298206762|ref|YP_003714941.1| hypothetical protein CA2559_00860 [Croceibacter atlanticus HTCC2559] gi|83849393|gb|EAP87261.1| hypothetical protein CA2559_00860 [Croceibacter atlanticus HTCC2559] Length = 359 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 47/362 (12%), Positives = 115/362 (31%), Gaps = 8/362 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL+ +F+ L + I + + ++I+ + ++ + + Sbjct: 1 MKILDWYILKRYLGTFVTLLLLFIPIGITVNLAEKIDKILANDVPFIEVAEYYLNFTIYF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + + + NTE++ ++G S ++P L A ++ + I Sbjct: 61 ANLLFPLFLFLSVIWFTSKLANNTEIIAFLSSGVSFYRFLRPYLIGATIVCLLALIMGMY 120 Query: 121 IEPKCRS--TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 + P + + + +D++ + + + Sbjct: 121 LAPSASKGFNEFKYTYLKSGGDNQQETKNVYRQINEDEVIYATNFNPSRQSALNFTLEHF 180 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 +D A + + L + + + L E + Sbjct: 181 KDNVLEYKISASRLQYNKEDTTYTLTNFNKRLVGARGDSLIHYRKLDTILPFEFDELTPN 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 A N + L + L Y +KR + + I +I++ A+ Sbjct: 241 SYVAETLNFNELNKFIEDEKRRGSGNLNRYLVVAYKRWSTPVSAYILTIIAVAV---SAM 297 Query: 299 VRQRKKIHPIFISLSISFGVFWG---FSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 R+ + I ++++F + I + + +P F I +I+LL Sbjct: 298 KRRGGMGINLAIGIAVAFSFVFLDKVLGTIAEQSDFSPLVAVWFPNVSFGILAIYLLYNA 357 Query: 356 KK 357 K+ Sbjct: 358 KR 359 >gi|84516313|ref|ZP_01003673.1| Predicted permease [Loktanella vestfoldensis SKA53] gi|84510009|gb|EAQ06466.1| Predicted permease [Loktanella vestfoldensis SKA53] Length = 369 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 50/351 (14%), Positives = 130/351 (37%), Gaps = 5/351 (1%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 +L + L +V + + + + + + + +S + ++ + +P+V+ + P Sbjct: 1 MLSQLIMLCGFFGLVLVLVYSINRAVLLFDQLIADGQSAGVFVEFTALTLPSVIRLALPL 60 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 V M ++EL+++ TG S + +PVL+ +++++ + + + + P+ + Sbjct: 61 AAFAAAIYVTNRMTNDSELVVVQATGYSLFRIARPVLYFGLIVALLMSLLMHFLVPRSAA 120 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 + + +T L F + I +P+ L +F+ D+R + Y Sbjct: 121 QLALRQTEIARNVTARLLTPGTFTEPIAGVTFYIRDLSPDGELFDLFLSDTRGIEDQVTY 180 Query: 188 YAQSGSIDLD--RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA--NSSTIVLKAN 243 A + + +++ DG V + + +F ++ + +A+ Sbjct: 181 TASRAFLVREAQETQLVMIDGMVQTLRLADQRLFTTRFAEFSYNVGGLLAPVTQAGRRAS 240 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 + LL+P P ++ H R +Q L ++ LI + R Sbjct: 241 HLSTWELLHPTPALVAETGSSAARMIADGHDRFSQSLLGMVAALIGFATLMVGSYSRFG- 299 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 I ++++ V + ++ + + YL I ++ Sbjct: 300 VWRQIVAAIALIVVVKALETAGLNAARADAQLWFLTYLPGAGGLVIVWCLL 350 >gi|330504705|ref|YP_004381574.1| permease YjgP/YjgQ family protein [Pseudomonas mendocina NK-01] gi|328918991|gb|AEB59822.1| permease YjgP/YjgQ family protein [Pseudomonas mendocina NK-01] Length = 374 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 47/370 (12%), Positives = 125/370 (33%), Gaps = 26/370 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + + ++ I + ++ + + +L I GY IP L Sbjct: 2 IVFRYLSREVLVTLSAVSAVLLVIIMSGRFIKYLAQAAQGVLDPGVLFLIMGYRIPGFLQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + ++E+ ++ TG S+ L + A+++++ + + Sbjct: 62 LILPLGLFLGFLLAYGRLYLDSEMTVLSATGVSQQRLTAYSMAPALIVALLVGWLSLGLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFF--------RLDDDLYIKISKYNPNNTLQGIF 174 P+ +++ ++ ++ L F +L S+ + F Sbjct: 122 PQGVASVARILSEQDALTELDTLVPGRFQSLRDGSRVTYSQELSPDRSELRGVFMSEKRF 181 Query: 175 IVDSRDTQTHKIYYAQSGS--IDLDRQAI-ILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 D R + + A+SG I D IL +G + P D +++ +Y + Sbjct: 182 STDGRSERGITVLVAESGRQEIQDDGSRYLILENGYRYDGEPGEADYRAIQYDTYGVLLP 241 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 + + LL ++E RL+ L I L+++ Sbjct: 242 KPEVAIEASEREATPTRELL----------GSSDPRMQAELQWRLSLPLLVFIVTLLAVP 291 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSI 349 + ++ + + ++ + + + P + + ++ ++ Sbjct: 292 L---SKVNPRQGRFLKLLPAIFLYMAYLGLLIAARGALDKGRLPAALGLWWVHGIFLAIG 348 Query: 350 FLLMIKKKYT 359 LL+ ++ + Sbjct: 349 LLLLYWERLS 358 >gi|157368809|ref|YP_001476798.1| permease YjgP/YjgQ family protein [Serratia proteamaculans 568] gi|157320573|gb|ABV39670.1| permease YjgP/YjgQ family protein [Serratia proteamaculans 568] Length = 356 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 44/354 (12%), Positives = 112/354 (31%), Gaps = 2/354 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ + ++ V + + +P + + Sbjct: 5 LDRYIGKTIFNTIIMTLFMLVSLSGIIKFVDQLRKVGQGEYTALSAGMFTLLSVPKDIEI 64 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 65 FFPMAALLGALLGLGQLATRSELVVMQASGFTRMQIAGSVMKTAIPLVLLTMAIGEWVAP 124 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + + Q+ +N + D +I I + L G+ I D + Sbjct: 125 QG-DQMARNYRAQQMYGGSLLSTKNGLWAKDGTDFIYIERVAGEKELSGVNIYHFNDQRR 183 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 + + + D + + + + + L Sbjct: 184 LETVRYAASASFEDGVWKLSQVDTSDLTNEKQVTGTQTLTGEWKTNLTPDKLGVVALDPT 243 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 ++S L N + Y+ ++ L + L+++ Sbjct: 244 SLSISGLHN-YVKYLKQSGQEANRYQLNMWSKVFSPLSVAVMMLMALSFIFGPLRSVPMG 302 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P + L + + +++K+K Sbjct: 303 VRVVTGISFGFLFYVLDQIFGPLSLVYNMPPVLGALLPSMLFLLISVYMLLKRK 356 >gi|317969817|ref|ZP_07971207.1| permease [Synechococcus sp. CB0205] Length = 400 Score = 109 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 45/358 (12%), Positives = 114/358 (31%), Gaps = 21/358 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQIL-QRINLVSSSTESLNILLKISGYLIPTVL 61 + ++ + L ++ + ++ + + V+ + L K+ +P L Sbjct: 27 LLDRWLFAEMLGPLLFGIAAFTAVSLSVGVVFELVRKVAEAGLPLWAAGKVLALRMPGFL 86 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P M T + ++ ++EL + + G ++ P L LA L+++ F+ ++I Sbjct: 87 VLSFPMATLMATLLAFSRLSGSSELTALRSIGVKTWRMVVPALVLAALMTLLTFVFNDVI 146 Query: 122 EPKCRSTI--------------KQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN 167 P + + +E + + +K N Sbjct: 147 VPSANYSASNVLDSALGRALSAQTGKNVVYSRFGRITPKEPGGNAGEGLTQLFYAKEFKN 206 Query: 168 NTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 +QG+ ++D ++ A + D +R +G + + + + SY Sbjct: 207 GEMQGVTLLDFSREDQQQVLTANTAVWDENRAMWEFRNGRILNIDAANNFTTSANYTSYY 266 Query: 228 LQTE--SANSSTIVLKANDQNLSFLLNPNPNNPNY-RPELLETYRSEFHKRLTQWLFPVI 284 + + A ++ + R ++ ++ Sbjct: 267 YPFTRAPQDVGMLPSDAAQMTVAQARRAEALLVQAGDQKEARRLRVRIQEKFAFPAICLV 326 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 FGLI + + + IS+ + FG ++ S+I + P + Sbjct: 327 FGLIGSSLGVRP--NSRTSRSQGFGISVLLIFG-YYLMSFIFSSLGIKGTLYPFFAAW 381 >gi|146313280|ref|YP_001178354.1| permease YjgP/YjgQ family protein [Enterobacter sp. 638] gi|145320156|gb|ABP62303.1| permease YjgP/YjgQ family protein [Enterobacter sp. 638] Length = 360 Score = 109 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 45/355 (12%), Positives = 116/355 (32%), Gaps = 3/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ + ++ + + IP + + Sbjct: 7 LDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSIPKDVQI 66 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 67 FFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAP 126 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+A + ++ L+ + ++ + + + + Sbjct: 127 QGEQMARNYRAQAMYGGSLMSTQQGLWAKDGNNFVYIERVKGDDELGGVSIYAFNDNRRL 186 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + YA + D + L+ + P S ++ + L Sbjct: 187 QSVRYAATAKFDSANRVWRLSQVDESNLQDPKQITGSQTVSGTWKTNLTPDKLGVVALDP 246 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S L N + Y+ ++ Q + + L+++ Sbjct: 247 DALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPMSVAVMMLMALSFIFGPLRSVAM 305 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P I L L I L ++ ++ Sbjct: 306 GVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPLIGAL-LPSASFFLISLWLLLRR 359 >gi|307250355|ref|ZP_07532304.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306857630|gb|EFM89737.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 360 Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats. Identities = 56/358 (15%), Positives = 120/358 (33%), Gaps = 5/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E YI + I L + ++I++++ V + S ++P+ Sbjct: 6 MNILERYIGKTIITMVFAVLLMSSGLVFIIKLVEEFKDVGKGSYDALTATYYSLLMLPSD 65 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ +EL+++ ++G SR + V+ AI L +F + Sbjct: 66 IKEFIPVVALIGGLLGLGNLASRSELVVMQSSGFSRFRIGLAVMKTAIPLIVFTMLVSEW 125 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + + + F+ D + +I I L + I D Sbjct: 126 GIPQT-EQYARNMRSIAQSGGSMLSTKGGFWAKDGNDFIYIRHIENERKLNNVSIYHFED 184 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + A + + + L + + S + K + + + L Sbjct: 185 KALKSVTQADNAVF--NGENWTLQRVQTSSLADNSIQQAKEVNKDWQTTITPSKLGIVSL 242 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K ++S L + + + ++ F +++ Q + + L++I Sbjct: 243 KPESLSISGL-SDYVGFLKETGQDSKRFQIAFWRKVYQPISMAVMMLLAISFVFGPLRSS 301 Query: 301 QRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I I F V F + P I L L C+S ++ L+ KK+ Sbjct: 302 AMGTKLFIGIIAGFVFYVSNIVFGNMTLVFSWIPVAIGALIPSLICLSIVWWLLTKKR 359 >gi|161505032|ref|YP_001572144.1| hypothetical protein SARI_03163 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160866379|gb|ABX23002.1| hypothetical protein SARI_03163 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 360 Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats. Identities = 45/354 (12%), Positives = 113/354 (31%), Gaps = 2/354 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ + ++ + +P + + Sbjct: 7 LDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGNYDALGAGMYTLLSVPKDIQI 66 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 67 FFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAP 126 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+A + ++ L+ + ++ + + Sbjct: 127 QGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELAGISIYAFNDQRRL 186 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + YA S D + + L+ + +P S ++ + L Sbjct: 187 QSVRYAASAKFDPEHKVWRLSQVDESDLQNPKQITGSQTVSGTWKTDLTPDKLGVVALDP 246 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S L N + Y+ ++ Q L + L+++ Sbjct: 247 DALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPM 305 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 IS F V + + P + L LM++K Sbjct: 306 GVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIVGALLPSASFFLISLWLMLRK 359 >gi|195940456|ref|ZP_03085838.1| inner membrane protein [Escherichia coli O157:H7 str. EC4024] gi|295097698|emb|CBK86788.1| Predicted permeases [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 360 Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats. Identities = 49/355 (13%), Positives = 117/355 (32%), Gaps = 3/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ + ++ + + +P + + Sbjct: 7 LDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQI 66 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 67 FFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAP 126 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+A + ++ L+ + + + + D + Sbjct: 127 QGEQMARNYRAQAMYGGSLLSTQQGLWAKDGQNFVYIERVKGDDELGGVSIYAFNNDRRL 186 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + YA S D + + L+ + +P S ++ + L Sbjct: 187 QSVRYAASAKFDANNKLWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVVALDP 246 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S L N + Y+ ++ Q L + L+++ Sbjct: 247 DALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPM 305 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P I L L I L M+ K+ Sbjct: 306 GVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGAL-LPSASFFLISLWMLLKR 359 >gi|193069794|ref|ZP_03050744.1| putative permease [Escherichia coli E110019] gi|192956848|gb|EDV87301.1| putative permease [Escherichia coli E110019] Length = 360 Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats. Identities = 46/355 (12%), Positives = 117/355 (32%), Gaps = 3/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ + ++ + + +P + + Sbjct: 7 LDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQI 66 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 67 FFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAP 126 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+A + ++ L+ + ++ + + + Sbjct: 127 QGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNENRRL 186 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + YA + D + + L+ + +P S ++ + L Sbjct: 187 QSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVVALDP 246 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S L N + Y+ ++ Q L + L+++ Sbjct: 247 DALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSAAVMMLMALSFIFGPLRSVPM 305 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P I L L I L ++ +K Sbjct: 306 GVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGAL-LPSASFFLISLWLLMRK 359 >gi|254786689|ref|YP_003074118.1| SecD export membrane protein [Teredinibacter turnerae T7901] gi|237687240|gb|ACR14504.1| SecD export membrane protein [Teredinibacter turnerae T7901] Length = 354 Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats. Identities = 51/357 (14%), Positives = 109/357 (30%), Gaps = 3/357 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + YI + S + L IV + + ++ +++ + + L IP+ Sbjct: 1 MRKLQRYIAAQVWGSVMGVLLVIVSLDAIADLVDQLSQLKGD-YTFLEALFYVVLYIPSS 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L + ++EL+++ G S LI V+ +L I + Sbjct: 60 VCDYLPLAALVGCLIGLGLLANSSELVVMRAAGVSVRQLIWSVMRPVLLFIIVGALVGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P Q E L+FR + + + Sbjct: 120 VSPYTDQYADSRRDLLQGHERALQSERGLWFREGSEYMHFNAVLPNGRLYGITRYKFADG 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + + +S D + GE+ + K S + +++ Sbjct: 180 GRLEQASFIRSAIYQGD--HWVEQGGEITQFDAEDKVDREEFISRNWYTEISPSLLNVLV 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 D+ L N + YR F ++ Q L + +I+I Sbjct: 238 LDPDELPMQRLYAYANYQEKQNIDSSEYRLAFWQKALQPLATLSLVMIAISFIFGPLRQT 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I + + + F + I +L FC + +LL+ + + Sbjct: 298 TMGFRVFIGVIVGLVFQTSQKLFGPMSIIMGFSPMFAVLIPIAFCFAFGWLLIKRSQ 354 >gi|260551090|ref|ZP_05825294.1| permease YjgP/YjgQ family protein [Acinetobacter sp. RUH2624] gi|260405857|gb|EEW99345.1| permease YjgP/YjgQ family protein [Acinetobacter sp. RUH2624] Length = 366 Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats. Identities = 51/355 (14%), Positives = 117/355 (32%), Gaps = 16/355 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + + L+ + I ++++ + + +IL I GY +P L Sbjct: 2 IIRRYLVKQVVSTSLVVIALLTLIMMGGRLIKYFGVAAQGRLDASILFSIIGYRLPEFLT 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + V + + E+ +++ +G SR L + ++ + ++ + + + Sbjct: 62 LILPLGFFIGLMLVFGRLYVDHEMAVLNGSGVSRHQLARLLIPMTLVYMVCQSVLMLWMT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++L+ + F + F S L+ IF + Sbjct: 122 PWGLREFEKLTTTQAVRTGFDLVRPREFISSGPYTIYAGSLSEDRKNLKDIFFYQRAAKE 181 Query: 183 THKIYYAQSGSIDLDR------QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + L G + P + +F+SY L+ E+ Sbjct: 182 GKPDVMILAKEATRVEVANDTANVVDLVQGRRYEIYPGQPKYTQAEFQSYRLRLENDKDV 241 Query: 237 TIVLKAND-QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + S LL RSE RL ++ ++S+ ++ Sbjct: 242 KFESSDVEALPTSKLLAKT---------NDPVIRSELGWRLFGPFTIIVALMMSVALSEV 292 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 + ++ P + + I K E + + P L ++IF Sbjct: 293 SPRQGRYYRLIPSIFIFASLIVLMIAIKTRISKGELDIWAYPAALLVYAIAAAIF 347 >gi|67922983|ref|ZP_00516478.1| permease YjgP/YjgQ [Crocosphaera watsonii WH 8501] gi|67855202|gb|EAM50466.1| permease YjgP/YjgQ [Crocosphaera watsonii WH 8501] Length = 394 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 46/362 (12%), Positives = 124/362 (34%), Gaps = 20/362 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW-VIQILQRINLVSSSTESLNILLKISGYLIPT 59 + + Y+ + FL + + + + V+ S L++ LK+ +P Sbjct: 20 LSIMDRYLFIELLLPFLFGMGIFTSLGLSIGSLFDLVRRVTESGLMLSVALKVLLLKLPG 79 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + + P + T ++ ++E++ + + G S LI PV+ +++ FI + Sbjct: 80 FVSLAFPMAMLLAALMAYTRLSSDSEIIALRSLGVSIYRLIIPVILFGFMVTGCAFIVND 139 Query: 120 IIEPKCRSTIKQLSAKAQL------------ALTFSYLEENLFFRLDDDLYIKISKYNPN 167 I P +A + ++E + ++ Sbjct: 140 WIAPAATHEAAVTLERAVNQERPDFKERNIVYPEYKTIQEENGQEATVLSRLFYAEEYNG 199 Query: 168 NTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 +QG+ I+D ++I ++S + ++ +G ++ +P +I++F+ Sbjct: 200 EQMQGLTILDRTQEGVNQIVTSESATWNISSNTWDFFNGTIYLIAPDGSYRNIVRFQHQQ 259 Query: 228 LQTE--SANSSTIVLKANDQNLSFLLNPNPN-NPNYRPELLETYRSEFHKRLTQWLFPVI 284 L + + + ++ + + + + ++ +I Sbjct: 260 LALPRAPLDLANRRQNFTEMTIAETKEYLKAMQLSGNEKRIRKVQVRLQEKYALPFVCLI 319 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 FGL+ + K + + + FG ++ +++ + P L +L Sbjct: 320 FGLVGAAIGVRPQNT---NKSTSFGVCVGLIFG-YYLLAFMSTSLGIWGILTPFLGAWLP 375 Query: 345 CI 346 I Sbjct: 376 NI 377 >gi|302879721|ref|YP_003848285.1| permease YjgP/YjgQ family protein [Gallionella capsiferriformans ES-2] gi|302582510|gb|ADL56521.1| permease YjgP/YjgQ family protein [Gallionella capsiferriformans ES-2] Length = 358 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 47/360 (13%), Positives = 114/360 (31%), Gaps = 6/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+ R I S + ++ + + + ++ + SL ++ IP Sbjct: 1 MNLLTRYLAREIYASIALVFAALIMLFAFLDFIGQLGTMGYGQYSLGYVVLFVLLTIPGH 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + T L M +EL I +G S ++ + +A+ + + FI + Sbjct: 61 IYELFPVAVLIGTIVALVQMAARSELTIYRASGASTGQMLGALSKIAVPMILLSFICGEL 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P ++L KA + + DD ++ + P+ +L I I Sbjct: 121 IAPPSERLAQKLRLKALNTQVSLQAFRSGVWVKDDASFVNVRSVMPDTSLSDIDIYTFDK 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + L+ L+D + M + + S +++ Sbjct: 181 SFHMNSVIRAKRASYLEPGVWQLHDVLETSFAARGVSTKSMPVREWQSALTPGILSVMLV 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + L ++ + Y +L ++ ++++ A R Sbjct: 241 VPEQMSALDLY-KYASHLKENKQQSARYEIAMWNKLVYPFALLVMMVLALPFA--SYQRR 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF---LFCISSIFLLMIKKK 357 +F+ + + + + N + +F + F+L ++ Sbjct: 298 AGGVSILVFMGIVLGLVFHFAGRLVGSLGSLNDWQPLFSATAMTGVFLLIGAFMLWRVER 357 >gi|303237034|ref|ZP_07323604.1| permease, YjgP/YjgQ family [Prevotella disiens FB035-09AN] gi|302482421|gb|EFL45446.1| permease, YjgP/YjgQ family [Prevotella disiens FB035-09AN] Length = 408 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 48/360 (13%), Positives = 119/360 (33%), Gaps = 10/360 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPTVL 61 + YI++ +++ S + I+ IA V + ++ + I+ IP Sbjct: 50 LLDWYIIKKFIGTYIFSIVLIISIAIVFDFNENLSKFTQYHAPWRAIIFDNYANFIPYYS 109 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + +P + + + ++E++ + G S L++P + IL++ + + + Sbjct: 110 NLFSPLFVFIAVIFFTSKLAGDSEIISMLAAGISFNRLMRPYMISCILIAGVTYYLNSSV 169 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + +A + + E + + N G + Sbjct: 170 IPHGTVIRQNFNALYRNDKKNTTGENIQLKVAKNTVAYIQHYDNTYKRGYGFSLDRFEGK 229 Query: 182 QTHKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + A I + + + ++ + + + I+ + E + Sbjct: 230 KLVDHLTATEIQYDTIADSKFHWKVTNWKIRKLKGLKEHITTGAEMDTVILMEPTDLIYF 289 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + + S LL+ + + + Y EFHKR+ I +I + + Sbjct: 290 DGQQEEFTSSQLLDYISKQTSRGSKNVIQYEVEFHKRIAMSFSSFILTIIGLSL---SSR 346 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--FCISSIFLLMIKK 356 R+ + I L++S + I N P+L ++ ++I +K Sbjct: 347 KRKGGMGMYLGIGLALSVS-YILLQAISSTFAINTNASPMLAAWIPNIIFAAIAYFCYRK 405 >gi|325104566|ref|YP_004274220.1| permease YjgP/YjgQ family protein [Pedobacter saltans DSM 12145] gi|324973414|gb|ADY52398.1| permease YjgP/YjgQ family protein [Pedobacter saltans DSM 12145] Length = 364 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 49/351 (13%), Positives = 109/351 (31%), Gaps = 2/351 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPTV 60 K + YI+R +F+ + I+ V I ++++ S + + ++ + IP Sbjct: 9 KLIDWYIIRKYLGTFVFTMAIFTLISVVFDISEKLDDFLKSRATFSQVVFEYYAGFIPFY 68 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + M TE++ I +G S ++P A ++ IF Sbjct: 69 LNFLNPLINFISVIFFTAKMADQTEIVPILTSGASFNRFLRPYFVAATVIFIFNIGFNLF 128 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ + S +L + +Y++ S N N+ + Sbjct: 129 VIPETNRLMINFENTYTKIKDTSRNNVHLQLDSNTYIYME-SFDNLRNSGYKFSLEKFDK 187 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + A S D + + + + + + K TL + + Sbjct: 188 KDLKEKLMADRISWDSVSHKWKIENYTIRYVDGLKEKMENGTVKDTTLDMKPIDFDIRDN 247 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + N L ++ E +KR T + LI + + ++ Sbjct: 248 IYSAMNFWELNEKIEKEKIRGSGVMVNLELEKYKRWTYPFSTYVLTLIGVALSSRKVRGG 307 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + + + + K P ++ LF ++L Sbjct: 308 VGLPLGLGILLSFVYILFIQFANVFALKGGLPPIIAVLIPNMLFGALGVYL 358 >gi|163739705|ref|ZP_02147113.1| permease YjgP/YjgQ [Phaeobacter gallaeciensis BS107] gi|163743162|ref|ZP_02150544.1| permease, YjgP/YjgQ family protein [Phaeobacter gallaeciensis 2.10] gi|161383579|gb|EDQ07966.1| permease, YjgP/YjgQ family protein [Phaeobacter gallaeciensis 2.10] gi|161386935|gb|EDQ11296.1| permease YjgP/YjgQ [Phaeobacter gallaeciensis BS107] Length = 367 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 47/360 (13%), Positives = 116/360 (32%), Gaps = 12/360 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + + Y R + F + C ++ + +I + ++I + SL L ++ P L Sbjct: 2 TLDFYYARRFLQWFAVICGVLLTLVMLIDLNEQIRRFEAQDLSLGQLFGLTLLNTPAALS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + T + + R++EL++ G S I + + LA L+ + + N I Sbjct: 62 EFLPLIMILTTIVLFIGLARSSELVVTRAIGRSGIRALAAPVLLAALIGVLAVSTLNPIV 121 Query: 123 PKCRSTIKQLSAKAQLALTFS--------YLEENLFFRLDDDLYIKISKYNPNNTLQGIF 174 + + L+ + + +L + S + TL + Sbjct: 122 AATSNRYRDLAETYRNGGPAALSLTGEGLWLRQGGAQGQSVIHATGYSGDTDDITLYDVT 181 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 I+ + +++ ++ + + + + L T + Sbjct: 182 ILSYGPEGRPIRQTLAEEAALDGGDWVLIKAKVWPLIVGVNPETNAERHSTLRLSTTLTS 241 Query: 235 SSTIVLKANDQNLS-FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 +S + L + + Y L + LF + L+ Sbjct: 242 ERIRDTLGTATGISVYDLPATIRELSEAGFSTKRYEVWLQVELARPLFLIAMALVGAAF- 300 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 R + ++ + FG+++ ++ + +N L + +++I L M Sbjct: 301 -TMRHARFGGTGLAVLTAVLLGFGLYFLRNFAQ-ILGENGQIPVALAGWAPPVAAILLTM 358 >gi|32035302|ref|ZP_00135309.1| COG0795: Predicted permeases [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208576|ref|YP_001053801.1| hypothetical protein APL_1104 [Actinobacillus pleuropneumoniae L20] gi|165976526|ref|YP_001652119.1| permease [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|190150429|ref|YP_001968954.1| hypothetical protein APP7_1160 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303250151|ref|ZP_07336353.1| permease [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303253324|ref|ZP_07339473.1| permease [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307248124|ref|ZP_07530152.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307252739|ref|ZP_07534630.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307257155|ref|ZP_07538927.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307261583|ref|ZP_07543251.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307263772|ref|ZP_07545378.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|126097368|gb|ABN74196.1| hypothetical protein APL_1104 [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|165876627|gb|ABY69675.1| predicted permease [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|189915560|gb|ACE61812.1| hypothetical protein APP7_1160 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302648006|gb|EFL78213.1| permease [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302651214|gb|EFL81368.1| permease [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306855301|gb|EFM87476.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306859771|gb|EFM91793.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306864317|gb|EFM96228.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306868706|gb|EFN00515.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306870893|gb|EFN02631.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 360 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 56/358 (15%), Positives = 120/358 (33%), Gaps = 5/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E YI + I L + ++I++++ V + S ++P+ Sbjct: 6 MNILERYIGKTIITMIFAVLLMSSGLVFIIKLVEEFKDVGKGSYDALTATYYSLLMLPSD 65 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ +EL+++ ++G SR + V+ AI L +F + Sbjct: 66 IKEFIPVVALIGGLLGLGNLASRSELVVMQSSGFSRFRIGLAVMKTAIPLIVFTMLVSEW 125 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + + + F+ D + +I I L + I D Sbjct: 126 GIPQT-EQYARNMRSIAQSGGSMLSTKGGFWAKDGNDFIYIRHIENERKLNNVSIYHFED 184 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + A + + + L + + S + K + + + L Sbjct: 185 KALKSVTQADNAVF--NGENWTLQRVQTSSLADNSIQQAKEVNKDWQTTITPSKLGIVSL 242 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K ++S L + + + ++ F +++ Q + + L++I Sbjct: 243 KPESLSISGL-SDYVGFLKETGQDSKRFQIAFWRKVYQPISMAVMMLLAISFVFGPLRSS 301 Query: 301 QRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I I F V F + P I L L C+S ++ L+ KK+ Sbjct: 302 AMGTKLFIGIIAGFVFYVSNIVFGNMTLVFSWIPVAIGALIPSLICLSIVWWLLTKKR 359 >gi|330827963|ref|YP_004390915.1| putative permease [Aeromonas veronii B565] gi|328803099|gb|AEB48298.1| Predicted permease [Aeromonas veronii B565] Length = 356 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 48/355 (13%), Positives = 115/355 (32%), Gaps = 2/355 (0%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + YI R I S L+ + +V +A +I+ ++++ V + L +P Sbjct: 4 ILDRYIGRVIFMSILLCEITLVGLAGLIKYVEQLKSVGDGNYDMINALYYVLLSMPKEAV 63 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + L + ++EL+++ G S+I+++ L AI L I + + + Sbjct: 64 LFFPLAALLGGLIGLGQLATSSELVVMQAAGRSKISIVMAALKTAIPLMIMVGLMGEYVA 123 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + L+ + + D + ++ I+ + L GI + + Sbjct: 124 PIA-KRMADDIKAGALSEGRLTVSAYGVWARDGNNFVNINGVRNDGALTGITLYRFTPER 182 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + ++ P ++ + + + Sbjct: 183 KLIDVVQAQEGVFERHHWLLKQTQVTRFDDPAQIRSEQHDKMEWSSELTPKQLGVVSIDP 242 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S LL+ + + Y+ E ++L L V L++ Sbjct: 243 ENLSVSGLLD-YIGYLDANKQDAGRYKLEMWRKLLSPLSVVAMILLASSFIFGPLRSVSM 301 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + I + V I + P + + L F ++ +K+ Sbjct: 302 GARMLMGIMTGFAVYVSDRVFGPISLVYAVPPILAAIAPSLLFGGISFYILSRKQ 356 >gi|110807998|ref|YP_691518.1| hypothetical protein SFV_4231 [Shigella flexneri 5 str. 8401] gi|110617546|gb|ABF06213.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401] Length = 360 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 46/355 (12%), Positives = 117/355 (32%), Gaps = 3/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ + ++ + + +P + + Sbjct: 7 LDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQI 66 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 67 FFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAP 126 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+A + ++ L+ + ++ + + + Sbjct: 127 QGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEVLGGISIYAFNENRRL 186 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + YA + D + + L+ + +P S ++ + L Sbjct: 187 QSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTDLTPDKLGVVALDP 246 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S L N + Y+ ++ Q L + L+++ Sbjct: 247 DALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPM 305 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P I L L I L ++ +K Sbjct: 306 GVRVITGISFGFVFYVLDQIFGPLTLVYGIPPIIGAL-LPSASFFLISLWLLMRK 359 >gi|157147732|ref|YP_001455051.1| hypothetical protein CKO_03536 [Citrobacter koseri ATCC BAA-895] gi|157084937|gb|ABV14615.1| hypothetical protein CKO_03536 [Citrobacter koseri ATCC BAA-895] Length = 360 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 48/355 (13%), Positives = 115/355 (32%), Gaps = 3/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ + ++ + + +P + + Sbjct: 7 LDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQI 66 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 67 FFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAP 126 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+A + ++ L+ + ++ + + Sbjct: 127 QGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELAGISIYAFNDQRRL 186 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + YA S D D + L+ + P S ++ + L Sbjct: 187 QSVRYAASAKFDADNKVWRLSQVDESDLKDPKQITGSQTVSGTWKTNLTPDKLGVVALDP 246 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S L N + Y+ ++ Q L + L+++ Sbjct: 247 DALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPM 305 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P I L L I L ++ +K Sbjct: 306 GVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGAL-LPSASFFLISLWLMMRK 359 >gi|315617676|gb|EFU98282.1| conserved hypothetical protein [Escherichia coli 3431] Length = 360 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 48/355 (13%), Positives = 117/355 (32%), Gaps = 3/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ + ++ + + +P + + Sbjct: 7 LDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQI 66 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ +G +R+ + V+ AI L + I P Sbjct: 67 FFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAMGEWIAP 126 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+A + ++ L+ + ++ + + + Sbjct: 127 QGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNENRRL 186 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + YA S D + + L+ + +P S ++ + L Sbjct: 187 QSVRYAASAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVVALDP 246 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S L N + Y+ ++ Q L + L+++ Sbjct: 247 DALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPM 305 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P I L L I L ++ +K Sbjct: 306 GVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGAL-LPSASFFVISLWLLMRK 359 >gi|262401791|ref|ZP_06078356.1| predicted permease [Vibrio sp. RC586] gi|262351763|gb|EEZ00894.1| predicted permease [Vibrio sp. RC586] Length = 366 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 55/357 (15%), Positives = 118/357 (33%), Gaps = 19/357 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + ++ + S +++L I G +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASDGEIPTSMILSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LA++ + + + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAGFNALWLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + QL + + L++ F R D + N L +F+ Sbjct: 122 PWSQDKEAQLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLHNVFVAQLAPRD 181 Query: 183 THK-----IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + RQ I L DG + P D I F SY + Sbjct: 182 SVLPSVMFSNSGAVKELSDGRQIITLYDGTRYEGVPTRVDYMITNFDSYDGLIGQREVKS 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 LL ++E RL+ V L++++ A Sbjct: 242 TGRDWEALPTLSLL----------KNSDLQAQAELQWRLSL---VVCIPLLTMLVVPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + ++ + + ++ I F S I ++ I+ L+ + +F +I Sbjct: 289 VNPRQGRFAKMGPAILIYLTYFLTLSATKSAI-EDGSLPVIIGLWPVNAALLFAALI 344 >gi|30065451|ref|NP_839622.1| hypothetical protein S4488 [Shigella flexneri 2a str. 2457T] gi|56480550|ref|NP_709939.2| hypothetical protein SF4227 [Shigella flexneri 2a str. 301] gi|30043715|gb|AAP19434.1| hypothetical protein S4488 [Shigella flexneri 2a str. 2457T] gi|56384101|gb|AAN45646.2| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|313646463|gb|EFS10925.1| hypothetical protein SF2457T_5378 [Shigella flexneri 2a str. 2457T] gi|332748940|gb|EGJ79363.1| hypothetical protein SFK671_4979 [Shigella flexneri K-671] gi|332749802|gb|EGJ80215.1| hypothetical protein SF274771_5046 [Shigella flexneri 2747-71] gi|332763113|gb|EGJ93356.1| hypothetical protein SF293071_4855 [Shigella flexneri 2930-71] gi|333010221|gb|EGK29654.1| hypothetical protein SFVA6_0009 [Shigella flexneri VA-6] gi|333011252|gb|EGK30666.1| hypothetical protein SFK272_0205 [Shigella flexneri K-272] gi|333011952|gb|EGK31337.1| hypothetical protein SFK304_5275 [Shigella flexneri K-304] gi|333012149|gb|EGK31531.1| hypothetical protein SFK227_5242 [Shigella flexneri K-227] Length = 360 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 46/355 (12%), Positives = 117/355 (32%), Gaps = 3/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ + ++ + + +P + + Sbjct: 7 LDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQI 66 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 67 FFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAP 126 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+A + ++ L+ + ++ + + + Sbjct: 127 QGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEVLGGISIYAFNENRRL 186 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + YA + D + + L+ + +P S ++ + L Sbjct: 187 QSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTDLTPDKLGVVALDP 246 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S L N + Y+ ++ Q L + L+++ Sbjct: 247 DALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPM 305 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P I L L I L ++ +K Sbjct: 306 GVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGAL-LPSASFFLISLWLLMRK 359 >gi|269121333|ref|YP_003309510.1| permease YjgP/YjgQ family protein [Sebaldella termitidis ATCC 33386] gi|268615211|gb|ACZ09579.1| permease YjgP/YjgQ family protein [Sebaldella termitidis ATCC 33386] Length = 364 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 48/362 (13%), Positives = 122/362 (33%), Gaps = 5/362 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI + + + FI + + + + ++ +++ YL+P V Sbjct: 1 MKIIDKYIYKALILPSVFGISIFTFILIINVFIDIMEKLFTNDLPFLLVIDYFIYLVPGV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + + + E++ I++ GTS + +P + ILL++ E Sbjct: 61 LTQTIPMGAFLGVMLTYGNFSETNEIIAIESAGTSLFRITRPAIIFGILLTVLGLFMEIE 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFF-RLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P+ + I + S E +F D + + + + F++ R Sbjct: 121 VNPRALNNINIEKRNLFSSKPSSLTEAKVFLSNSDAGFGFYVDEVDNSKAEASKFVLFQR 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + + ++L + E + +++ L + + Sbjct: 181 TKEGEYPTVFFAEKAKFEAGYMLLKNVEGFNFDKTGDRKVVARYEEQYLPMSTFFKQEDI 240 Query: 240 LKA--NDQNLSFLLNPNPNNPNYRPELLE--TYRSEFHKRLTQWLFPVIFGLISIVAADK 295 K ++ NL L + + Y ++++R+ V+ + ++ A Sbjct: 241 EKKSRSEMNLRELREAYKQSIAEGESYEDSVKYMIKYNERIIGPFASVLLCWLGVLLAVS 300 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + I + G+ ++ K +P + F+ + + L + K Sbjct: 301 NKRSGKGISFGISLIVIFAYIGLASYAKIVVQKNHIDPNIAMWMPNFILLVLCLVLSIKK 360 Query: 356 KK 357 + Sbjct: 361 SR 362 >gi|123969132|ref|YP_001009990.1| putative permease [Prochlorococcus marinus str. AS9601] gi|123199242|gb|ABM70883.1| possible permease [Prochlorococcus marinus str. AS9601] Length = 401 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 55/376 (14%), Positives = 128/376 (34%), Gaps = 25/376 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQ-ILQRINLVSSSTESLNILLKISGYLIPTVL 61 + ++L I L + I+ + + I + L + LK+ + +P+ L Sbjct: 25 LIDRWLLGQIIPPMLFAISAFTVISLSVGVMFDLIRKIVEYGLPLFLALKVLFFSLPSFL 84 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + T ++ N+ELL + + G +I P + L+I ++ F + + Sbjct: 85 VLSFPMAVLLSTLLAYGKLSSNSELLALKSLGIKTSRIISPAIALSIFMTGLTFYFNDNL 144 Query: 122 EPKCRS-----------------TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKY 164 PK K+ ++ + + +I S++ Sbjct: 145 VPKSNKLAETTLRAGIGSSFSEEKGKENIMFSRYGSRINSETKKPTKNNSKLTHIFYSQW 204 Query: 165 NPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDIS-IMKF 223 N ++ + ++D +I A SG D + I ++G + + + K Sbjct: 205 YENKIMKNVTVLDFSREDFQQILKANSGRFDKKSSSWIFSNGSIVSIDSGGQTTNIQFKE 264 Query: 224 KSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRP-ELLETYRSEFHKRLTQWLFP 282 Y + + AN+ L + + + + ++ T Sbjct: 265 YKYPFVEGPMELAKVPKDANEMTLKQAIQAEKIYKKTGNLKEVRRMKVRIQEKFTLPFAC 324 Query: 283 VIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 ++FGLI + K +S+ + +++ S+I PI + Sbjct: 325 LVFGLIGSSLG--SKSNLRSSKSQGFGLSVIL-ILIYYVMSFIFSSFGVKGILPPIFAAW 381 Query: 343 LFCISSI--FLLMIKK 356 L + S+ + +++K Sbjct: 382 LPVLISLGGGIYLLRK 397 >gi|323965651|gb|EGB61105.1| inner membrane protein yjgQ [Escherichia coli M863] gi|327250208|gb|EGE61927.1| hypothetical protein ECSTEC7V_5012 [Escherichia coli STEC_7v] Length = 360 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 46/355 (12%), Positives = 117/355 (32%), Gaps = 3/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ + ++ + + +P + + Sbjct: 7 LDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQI 66 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 67 FFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAP 126 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+A + ++ L+ + ++ + + + Sbjct: 127 QGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNENRRL 186 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + YA + D + + L+ + +P S ++ + L Sbjct: 187 ESVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVVALDP 246 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S L N + Y+ ++ Q L + L+++ Sbjct: 247 DALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPM 305 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P I L L I L ++ +K Sbjct: 306 GVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGAL-LPSASFFLISLWLLMRK 359 >gi|332749215|gb|EGJ79636.1| hypothetical protein SF434370_4578 [Shigella flexneri 4343-70] gi|333009229|gb|EGK28685.1| hypothetical protein SFK218_0005 [Shigella flexneri K-218] Length = 360 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 46/355 (12%), Positives = 118/355 (33%), Gaps = 3/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ + ++ + + +P + + Sbjct: 7 LDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQI 66 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ +G +R+ + V+ AI L + + + P Sbjct: 67 FFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMVIGEWVAP 126 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+A + ++ L+ + ++ + + + Sbjct: 127 QGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEVLGGISIYAFNENRRL 186 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + YA + D + + L+ + +P S ++ + L Sbjct: 187 QSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTDLTPDKLGVVALDP 246 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S L N + Y+ ++ Q L + L+++ Sbjct: 247 DALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPM 305 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P I L L I L ++ +K Sbjct: 306 GVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGAL-LPSASFFLISLWLLMRK 359 >gi|309784105|ref|ZP_07678747.1| conserved hypothetical protein [Shigella dysenteriae 1617] gi|308928098|gb|EFP73563.1| conserved hypothetical protein [Shigella dysenteriae 1617] Length = 360 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 46/355 (12%), Positives = 116/355 (32%), Gaps = 3/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ + ++ + + +P + + Sbjct: 7 LDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQI 66 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ +G +R+ + V+ AI L + P Sbjct: 67 FFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWAAP 126 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+A + ++ L+ + ++ + + + Sbjct: 127 QGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNENRRL 186 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + YA + D + + L+ + +P S ++ + L Sbjct: 187 QSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVVALDP 246 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S L N + Y+ ++ Q L + L+++ Sbjct: 247 DALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPM 305 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P I L L I L ++ +K Sbjct: 306 GVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGAL-LPSASFFLISLWLLMRK 359 >gi|116070679|ref|ZP_01467948.1| possible permease [Synechococcus sp. BL107] gi|116066084|gb|EAU71841.1| possible permease [Synechococcus sp. BL107] Length = 384 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 47/375 (12%), Positives = 126/375 (33%), Gaps = 21/375 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + ++L I L + + I ++ + + + L++ IP+ L Sbjct: 14 LLDQWLLAEIAAPLLFAIASFTVLGLSIGVMFELARRLVDGLPILVALQLLLLNIPSFLV 73 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P T + ++ N+EL + + G S L+ P L L+I L+ F+ ++I Sbjct: 74 LSLPMATLFATLLAYSKLSSNSELTALRSLGVSTTRLVVPALALSIFLTGLTFVFNDVIV 133 Query: 123 PKCRST-------------IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT 169 P+ + + + + ++ Sbjct: 134 PRANTQAEITLQKGLGRALATEKGKDITFNSFGKIYDPKTETSSRGLRQLFYARRFEQGE 193 Query: 170 LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ 229 + + ++D +++ A+ + + +G+V +P + + + F Sbjct: 194 MLDVTLLDFSRADYRQMWIAERAVYNEAKAMWEFFNGQVLTLNP-NGSTTRLAFDENFYP 252 Query: 230 TESANSS--TIVLKANDQNLSFLLNPNPNNPNYRP-ELLETYRSEFHKRLTQWLFPVIFG 286 S + AND LS ++ + + R ++ + + ++FG Sbjct: 253 LSSGPLQVAKLPDDANDMTLSQAISAEKIESDAGNIKAARKLRVRIQEKFSFPMACIVFG 312 Query: 287 LISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCI 346 LI + + + +S+ + G ++ S + + P +L + Sbjct: 313 LIGSSLGARPGS--RTSRSQGFGVSILLILG-YYALSVSFSSLGVSGILPPFFAAWLPVL 369 Query: 347 SSIFL-LMIKKKYTK 360 S+ ++ ++ ++ Sbjct: 370 ISLGAGGLLLRQASR 384 >gi|38704251|ref|NP_313266.2| hypothetical protein ECs5239 [Escherichia coli O157:H7 str. Sakai] gi|89110978|ref|AP_004758.1| conserved inner membrane protein [Escherichia coli str. K-12 substr. W3110] gi|90111715|ref|NP_418683.4| lipopolysaccharide export ABC permease of the LptBFGC export complex [Escherichia coli str. K-12 substr. MG1655] gi|110644621|ref|YP_672351.1| putative membrane protein YjgQ [Escherichia coli 536] gi|157155171|ref|YP_001465771.1| putative permease [Escherichia coli E24377A] gi|157163737|ref|YP_001461055.1| putative permease [Escherichia coli HS] gi|168749566|ref|ZP_02774588.1| putative permease [Escherichia coli O157:H7 str. EC4113] gi|168754844|ref|ZP_02779851.1| putative permease [Escherichia coli O157:H7 str. EC4401] gi|168760517|ref|ZP_02785524.1| putative permease [Escherichia coli O157:H7 str. EC4501] gi|168766553|ref|ZP_02791560.1| putative permease [Escherichia coli O157:H7 str. EC4486] gi|168774016|ref|ZP_02799023.1| putative permease [Escherichia coli O157:H7 str. EC4196] gi|168782789|ref|ZP_02807796.1| putative permease [Escherichia coli O157:H7 str. EC4076] gi|168784912|ref|ZP_02809919.1| putative permease [Escherichia coli O157:H7 str. EC869] gi|168797842|ref|ZP_02822849.1| putative permease [Escherichia coli O157:H7 str. EC508] gi|170021730|ref|YP_001726684.1| permease YjgP/YjgQ family protein [Escherichia coli ATCC 8739] gi|170083701|ref|YP_001733021.1| inner membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|170681768|ref|YP_001746666.1| putative permease [Escherichia coli SMS-3-5] gi|188493811|ref|ZP_03001081.1| putative permease [Escherichia coli 53638] gi|191168708|ref|ZP_03030487.1| putative permease [Escherichia coli B7A] gi|193063693|ref|ZP_03044781.1| putative permease [Escherichia coli E22] gi|194426570|ref|ZP_03059124.1| putative permease [Escherichia coli B171] gi|194437817|ref|ZP_03069912.1| putative permease [Escherichia coli 101-1] gi|195937288|ref|ZP_03082670.1| inner membrane protein [Escherichia coli O157:H7 str. EC4024] gi|208808552|ref|ZP_03250889.1| putative permease [Escherichia coli O157:H7 str. EC4206] gi|208812170|ref|ZP_03253499.1| putative permease [Escherichia coli O157:H7 str. EC4045] gi|208821551|ref|ZP_03261871.1| putative permease [Escherichia coli O157:H7 str. EC4042] gi|209396919|ref|YP_002273807.1| putative permease [Escherichia coli O157:H7 str. EC4115] gi|217326107|ref|ZP_03442191.1| putative permease [Escherichia coli O157:H7 str. TW14588] gi|218556809|ref|YP_002389723.1| hypothetical protein ECIAI1_4493 [Escherichia coli IAI1] gi|218561420|ref|YP_002394333.1| hypothetical protein ECS88_4849 [Escherichia coli S88] gi|218692649|ref|YP_002400861.1| hypothetical protein ECED1_5115 [Escherichia coli ED1a] gi|218698010|ref|YP_002405677.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli 55989] gi|218702965|ref|YP_002410594.1| hypothetical protein ECIAI39_4735 [Escherichia coli IAI39] gi|218707868|ref|YP_002415387.1| hypothetical protein ECUMN_4794 [Escherichia coli UMN026] gi|227886684|ref|ZP_04004489.1| inner membrane protein [Escherichia coli 83972] gi|238903363|ref|YP_002929159.1| conserved inner membrane protein [Escherichia coli BW2952] gi|253775115|ref|YP_003037946.1| permease YjgP/YjgQ family protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254164187|ref|YP_003047297.1| inner membrane protein [Escherichia coli B str. REL606] gi|254796282|ref|YP_003081119.1| inner membrane protein [Escherichia coli O157:H7 str. TW14359] gi|256019914|ref|ZP_05433779.1| conserved inner membrane protein [Shigella sp. D9] gi|256025198|ref|ZP_05439063.1| conserved inner membrane protein [Escherichia sp. 4_1_40B] gi|260847093|ref|YP_003224871.1| inner membrane protein [Escherichia coli O103:H2 str. 12009] gi|260858414|ref|YP_003232305.1| inner membrane protein [Escherichia coli O26:H11 str. 11368] gi|260871014|ref|YP_003237416.1| inner membrane protein [Escherichia coli O111:H- str. 11128] gi|261225381|ref|ZP_05939662.1| conserved inner membrane protein [Escherichia coli O157:H7 str. FRIK2000] gi|261255366|ref|ZP_05947899.1| inner membrane protein [Escherichia coli O157:H7 str. FRIK966] gi|293402887|ref|ZP_06646984.1| membrane protein [Escherichia coli FVEC1412] gi|293407982|ref|ZP_06651822.1| conserved hypothetical protein [Escherichia coli B354] gi|293417762|ref|ZP_06660384.1| lipopolysaccharide export system permease lptG [Escherichia coli B185] gi|293476565|ref|ZP_06664973.1| lipopolysaccharide export system permease lptG [Escherichia coli B088] gi|298378413|ref|ZP_06988297.1| lipopolysaccharide export system permease lptG [Escherichia coli FVEC1302] gi|300818513|ref|ZP_07098722.1| putative inner membrane protein [Escherichia coli MS 107-1] gi|300821369|ref|ZP_07101517.1| putative inner membrane protein [Escherichia coli MS 119-7] gi|300899412|ref|ZP_07117667.1| putative inner membrane protein [Escherichia coli MS 198-1] gi|300906110|ref|ZP_07123829.1| putative inner membrane protein [Escherichia coli MS 84-1] gi|300916358|ref|ZP_07133100.1| putative inner membrane protein [Escherichia coli MS 115-1] gi|300923940|ref|ZP_07139950.1| putative inner membrane protein [Escherichia coli MS 182-1] gi|300928088|ref|ZP_07143636.1| putative inner membrane protein [Escherichia coli MS 187-1] gi|300950208|ref|ZP_07164149.1| putative inner membrane protein [Escherichia coli MS 116-1] gi|300957115|ref|ZP_07169356.1| putative inner membrane protein [Escherichia coli MS 175-1] gi|300972387|ref|ZP_07171920.1| putative inner membrane protein [Escherichia coli MS 45-1] gi|300988160|ref|ZP_07178580.1| putative inner membrane protein [Escherichia coli MS 200-1] gi|301024382|ref|ZP_07188070.1| putative inner membrane protein [Escherichia coli MS 69-1] gi|301050052|ref|ZP_07196964.1| putative inner membrane protein [Escherichia coli MS 185-1] gi|301304685|ref|ZP_07210793.1| putative inner membrane protein [Escherichia coli MS 124-1] gi|301325193|ref|ZP_07218717.1| putative inner membrane protein [Escherichia coli MS 78-1] gi|301643390|ref|ZP_07243440.1| putative inner membrane protein [Escherichia coli MS 146-1] gi|306815520|ref|ZP_07449669.1| Inner membrane protein yjgQ [Escherichia coli NC101] gi|307140957|ref|ZP_07500313.1| Inner membrane protein yjgQ [Escherichia coli H736] gi|307312963|ref|ZP_07592591.1| permease YjgP/YjgQ family protein [Escherichia coli W] gi|309792903|ref|ZP_07687331.1| putative inner membrane protein [Escherichia coli MS 145-7] gi|312965943|ref|ZP_07780169.1| conserved hypothetical protein [Escherichia coli 2362-75] gi|312973920|ref|ZP_07788091.1| conserved hypothetical protein [Escherichia coli 1827-70] gi|331645011|ref|ZP_08346128.1| inner membrane protein YjgQ [Escherichia coli H736] gi|331650395|ref|ZP_08351467.1| inner membrane protein YjgQ [Escherichia coli M605] gi|331656096|ref|ZP_08357084.1| inner membrane protein YjgQ [Escherichia coli M718] gi|331660843|ref|ZP_08361775.1| inner membrane protein YjgQ [Escherichia coli TA206] gi|331665931|ref|ZP_08366825.1| inner membrane protein YjgQ [Escherichia coli TA143] gi|331671170|ref|ZP_08372003.1| inner membrane protein YjgQ [Escherichia coli TA271] gi|331671403|ref|ZP_08372201.1| inner membrane protein YjgQ [Escherichia coli TA280] gi|331680400|ref|ZP_08381059.1| inner membrane protein YjgQ [Escherichia coli H591] gi|331681282|ref|ZP_08381919.1| inner membrane protein YjgQ [Escherichia coli H299] gi|83288182|sp|P0ADC7|LPTG_ECOL6 RecName: Full=Lipopolysaccharide export system permease protein lptG gi|83288183|sp|P0ADC6|LPTG_ECOLI RecName: Full=Lipopolysaccharide export system permease protein lptG gi|31323181|gb|AAP43525.1| YjgQ [Escherichia coli B] gi|85677009|dbj|BAE78259.1| conserved inner membrane protein [Escherichia coli str. K12 substr. W3110] gi|87082400|gb|AAC77219.2| lipopolysaccharide export ABC permease of the LptBFGC export complex [Escherichia coli str. K-12 substr. MG1655] gi|110346213|gb|ABG72450.1| putative membrane protein YjgQ [Escherichia coli 536] gi|157069417|gb|ABV08672.1| putative permease [Escherichia coli HS] gi|157077201|gb|ABV16909.1| putative permease [Escherichia coli E24377A] gi|169756658|gb|ACA79357.1| permease YjgP/YjgQ family protein [Escherichia coli ATCC 8739] gi|169891536|gb|ACB05243.1| conserved inner membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|170519486|gb|ACB17664.1| putative permease [Escherichia coli SMS-3-5] gi|187770216|gb|EDU34060.1| putative permease [Escherichia coli O157:H7 str. EC4196] gi|188016197|gb|EDU54319.1| putative permease [Escherichia coli O157:H7 str. EC4113] gi|188489010|gb|EDU64113.1| putative permease [Escherichia coli 53638] gi|188999755|gb|EDU68741.1| putative permease [Escherichia coli O157:H7 str. EC4076] gi|189357825|gb|EDU76244.1| putative permease [Escherichia coli O157:H7 str. EC4401] gi|189364202|gb|EDU82621.1| putative permease [Escherichia coli O157:H7 str. EC4486] gi|189368974|gb|EDU87390.1| putative permease [Escherichia coli O157:H7 str. EC4501] gi|189375169|gb|EDU93585.1| putative permease [Escherichia coli O157:H7 str. EC869] gi|189379540|gb|EDU97956.1| putative permease [Escherichia coli O157:H7 str. EC508] gi|190901256|gb|EDV61026.1| putative permease [Escherichia coli B7A] gi|192930680|gb|EDV83286.1| putative permease [Escherichia coli E22] gi|194415309|gb|EDX31577.1| putative permease [Escherichia coli B171] gi|194423313|gb|EDX39305.1| putative permease [Escherichia coli 101-1] gi|208728353|gb|EDZ77954.1| putative permease [Escherichia coli O157:H7 str. EC4206] gi|208733447|gb|EDZ82134.1| putative permease [Escherichia coli O157:H7 str. EC4045] gi|208741674|gb|EDZ89356.1| putative permease [Escherichia coli O157:H7 str. EC4042] gi|209158319|gb|ACI35752.1| putative permease [Escherichia coli O157:H7 str. EC4115] gi|217322328|gb|EEC30752.1| putative permease [Escherichia coli O157:H7 str. TW14588] gi|218354742|emb|CAV01806.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli 55989] gi|218363578|emb|CAR01235.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli IAI1] gi|218368189|emb|CAR05997.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli S88] gi|218372951|emb|CAR20832.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli IAI39] gi|218430213|emb|CAR11214.2| conserved hypothetical protein; putative inner membrane protein [Escherichia coli ED1a] gi|218434965|emb|CAR15906.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli UMN026] gi|222036034|emb|CAP78779.1| Inner membrane protein yjgQ [Escherichia coli LF82] gi|227836257|gb|EEJ46723.1| inner membrane protein [Escherichia coli 83972] gi|238860250|gb|ACR62248.1| conserved inner membrane protein [Escherichia coli BW2952] gi|242379782|emb|CAQ34609.1| LptG, subunit of LptABCFG ABC transporter [Escherichia coli BL21(DE3)] gi|253326159|gb|ACT30761.1| permease YjgP/YjgQ family protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253976090|gb|ACT41761.1| conserved inner membrane protein [Escherichia coli B str. REL606] gi|253980246|gb|ACT45916.1| conserved inner membrane protein [Escherichia coli BL21(DE3)] gi|254595682|gb|ACT75043.1| conserved inner membrane protein [Escherichia coli O157:H7 str. TW14359] gi|257757063|dbj|BAI28565.1| inner membrane protein [Escherichia coli O26:H11 str. 11368] gi|257762240|dbj|BAI33737.1| inner membrane protein [Escherichia coli O103:H2 str. 12009] gi|257767370|dbj|BAI38865.1| inner membrane protein [Escherichia coli O111:H- str. 11128] gi|260450918|gb|ACX41340.1| permease YjgP/YjgQ family protein [Escherichia coli DH1] gi|281181360|dbj|BAI57690.1| conserved hypothetical protein [Escherichia coli SE15] gi|284924432|emb|CBG37557.1| putative permease [Escherichia coli 042] gi|291321018|gb|EFE60460.1| lipopolysaccharide export system permease lptG [Escherichia coli B088] gi|291429802|gb|EFF02816.1| membrane protein [Escherichia coli FVEC1412] gi|291430480|gb|EFF03478.1| lipopolysaccharide export system permease lptG [Escherichia coli B185] gi|291472233|gb|EFF14715.1| conserved hypothetical protein [Escherichia coli B354] gi|298280747|gb|EFI22248.1| lipopolysaccharide export system permease lptG [Escherichia coli FVEC1302] gi|300298210|gb|EFJ54595.1| putative inner membrane protein [Escherichia coli MS 185-1] gi|300305970|gb|EFJ60490.1| putative inner membrane protein [Escherichia coli MS 200-1] gi|300316133|gb|EFJ65917.1| putative inner membrane protein [Escherichia coli MS 175-1] gi|300356990|gb|EFJ72860.1| putative inner membrane protein [Escherichia coli MS 198-1] gi|300396608|gb|EFJ80146.1| putative inner membrane protein [Escherichia coli MS 69-1] gi|300402053|gb|EFJ85591.1| putative inner membrane protein [Escherichia coli MS 84-1] gi|300410966|gb|EFJ94504.1| putative inner membrane protein [Escherichia coli MS 45-1] gi|300416318|gb|EFJ99628.1| putative inner membrane protein [Escherichia coli MS 115-1] gi|300419818|gb|EFK03129.1| putative inner membrane protein [Escherichia coli MS 182-1] gi|300450448|gb|EFK14068.1| putative inner membrane protein [Escherichia coli MS 116-1] gi|300463885|gb|EFK27378.1| putative inner membrane protein [Escherichia coli MS 187-1] gi|300526258|gb|EFK47327.1| putative inner membrane protein [Escherichia coli MS 119-7] gi|300528917|gb|EFK49979.1| putative inner membrane protein [Escherichia coli MS 107-1] gi|300840035|gb|EFK67795.1| putative inner membrane protein [Escherichia coli MS 124-1] gi|300847954|gb|EFK75714.1| putative inner membrane protein [Escherichia coli MS 78-1] gi|301078220|gb|EFK93026.1| putative inner membrane protein [Escherichia coli MS 146-1] gi|305851182|gb|EFM51637.1| Inner membrane protein yjgQ [Escherichia coli NC101] gi|306907131|gb|EFN37638.1| permease YjgP/YjgQ family protein [Escherichia coli W] gi|307556432|gb|ADN49207.1| putative membrane protein YjgQ [Escherichia coli ABU 83972] gi|308123189|gb|EFO60451.1| putative inner membrane protein [Escherichia coli MS 145-7] gi|309704766|emb|CBJ04117.1| putative permease [Escherichia coli ETEC H10407] gi|310331454|gb|EFP98710.1| conserved hypothetical protein [Escherichia coli 1827-70] gi|312289186|gb|EFR17080.1| conserved hypothetical protein [Escherichia coli 2362-75] gi|312948915|gb|ADR29742.1| inner membrane protein [Escherichia coli O83:H1 str. NRG 857C] gi|315063569|gb|ADT77896.1| conserved inner membrane protein [Escherichia coli W] gi|315138813|dbj|BAJ45972.1| inner membrane protein yjgQ [Escherichia coli DH1] gi|315255621|gb|EFU35589.1| putative inner membrane protein [Escherichia coli MS 85-1] gi|315293627|gb|EFU52979.1| putative inner membrane protein [Escherichia coli MS 153-1] gi|315298979|gb|EFU58233.1| putative inner membrane protein [Escherichia coli MS 16-3] gi|320639019|gb|EFX08665.1| lipopolysaccharide ABC transporter permease [Escherichia coli O157:H7 str. G5101] gi|320644389|gb|EFX13454.1| lipopolysaccharide ABC transporter permease [Escherichia coli O157:H- str. 493-89] gi|320649706|gb|EFX18230.1| lipopolysaccharide ABC transporter permease [Escherichia coli O157:H- str. H 2687] gi|320655103|gb|EFX23064.1| lipopolysaccharide ABC transporter permease [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320660609|gb|EFX28070.1| lipopolysaccharide ABC transporter permease [Escherichia coli O55:H7 str. USDA 5905] gi|320665536|gb|EFX32582.1| lipopolysaccharide ABC transporter permease [Escherichia coli O157:H7 str. LSU-61] gi|323157529|gb|EFZ43638.1| hypothetical protein ECEPECA14_0586 [Escherichia coli EPECa14] gi|323162061|gb|EFZ47933.1| hypothetical protein ECE128010_1826 [Escherichia coli E128010] gi|323171708|gb|EFZ57354.1| hypothetical protein ECLT68_3917 [Escherichia coli LT-68] gi|323176177|gb|EFZ61769.1| hypothetical protein ECOK1180_4867 [Escherichia coli 1180] gi|323181996|gb|EFZ67407.1| hypothetical protein ECOK1357_4674 [Escherichia coli 1357] gi|323189856|gb|EFZ75134.1| hypothetical protein ECRN5871_1643 [Escherichia coli RN587/1] gi|323380351|gb|ADX52619.1| permease YjgP/YjgQ family protein [Escherichia coli KO11] gi|323935384|gb|EGB31732.1| inner membrane protein yjgQ [Escherichia coli E1520] gi|323940180|gb|EGB36374.1| inner membrane protein yjgQ [Escherichia coli E482] gi|323945995|gb|EGB42033.1| inner membrane protein yjgQ [Escherichia coli H120] gi|323960303|gb|EGB55944.1| inner membrane protein yjgQ [Escherichia coli H489] gi|323970484|gb|EGB65743.1| inner membrane protein yjgQ [Escherichia coli TA007] gi|323975395|gb|EGB70496.1| inner membrane protein yjgQ [Escherichia coli TW10509] gi|324005135|gb|EGB74354.1| putative inner membrane protein [Escherichia coli MS 57-2] gi|324013726|gb|EGB82945.1| putative inner membrane protein [Escherichia coli MS 60-1] gi|324019239|gb|EGB88458.1| putative inner membrane protein [Escherichia coli MS 117-3] gi|324118823|gb|EGC12715.1| inner membrane protein yjgQ [Escherichia coli E1167] gi|331035986|gb|EGI08224.1| inner membrane protein YjgQ [Escherichia coli H736] gi|331040789|gb|EGI12947.1| inner membrane protein YjgQ [Escherichia coli M605] gi|331046450|gb|EGI18540.1| inner membrane protein YjgQ [Escherichia coli M718] gi|331051885|gb|EGI23924.1| inner membrane protein YjgQ [Escherichia coli TA206] gi|331056982|gb|EGI28976.1| inner membrane protein YjgQ [Escherichia coli TA143] gi|331061759|gb|EGI33685.1| inner membrane protein YjgQ [Escherichia coli TA271] gi|331071248|gb|EGI42605.1| inner membrane protein YjgQ [Escherichia coli TA280] gi|331071863|gb|EGI43199.1| inner membrane protein YjgQ [Escherichia coli H591] gi|331081503|gb|EGI52664.1| inner membrane protein YjgQ [Escherichia coli H299] gi|332083263|gb|EGI88494.1| hypothetical protein SB521682_5142 [Shigella boydii 5216-82] gi|332083781|gb|EGI88999.1| hypothetical protein SD15574_5323 [Shigella dysenteriae 155-74] gi|332346341|gb|AEE59675.1| conserved hypothetical protein [Escherichia coli UMNK88] Length = 360 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 46/355 (12%), Positives = 117/355 (32%), Gaps = 3/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ + ++ + + +P + + Sbjct: 7 LDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQI 66 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 67 FFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAP 126 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+A + ++ L+ + ++ + + + Sbjct: 127 QGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNENRRL 186 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + YA + D + + L+ + +P S ++ + L Sbjct: 187 QSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVVALDP 246 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S L N + Y+ ++ Q L + L+++ Sbjct: 247 DALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPM 305 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P I L L I L ++ +K Sbjct: 306 GVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGAL-LPSASFFLISLWLLMRK 359 >gi|313159015|gb|EFR58390.1| permease, YjgP/YjgQ family [Alistipes sp. HGB5] Length = 367 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 45/363 (12%), Positives = 114/363 (31%), Gaps = 8/363 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPTV 60 K + YIL ++ + I+ + + +++I+ + L +++ IP Sbjct: 9 KILDRYILGKFLATYFFAIAMIIIVVVLFDYVEKIDDFTELHAPLRDVIFDYYLNFIPFF 68 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + + + M TE++ + + G S L+ P A+++ Sbjct: 69 INQFSGLFTFIACIFFTSKMAYQTEIVAMLSGGMSFRRLMWPYFLGALIIGSLSLTLNLW 128 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF-IVDSR 179 + P + I ++ + +++ +++ + I YN + + Sbjct: 129 LIPISQRHIVNFESQYIKRKQNNKFNRHIYRQIEPGTFAYIRGYNDASQQASFLALEHYY 188 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPIS-KDISIMKFKSYTLQTESANSSTI 238 + A + + + + + + + E I Sbjct: 189 SGTMTRSLEASDVKFNPETKCWTAPRYTKREFDSLGVEKFEQFRNLDTLINLEVTELGEI 248 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 N++ L + + E H R L I LI + + Sbjct: 249 NDLIQTMNITELNEFLDQQRAKGSDAINIIEVEKHARFAYPLSTFILTLIGVSL---SSR 305 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL-LMIKKK 357 + I I + F + F+ + ++ P L ++L I +F+ + + +K Sbjct: 306 KVRGGTGLHIGIGTGLCFS-YILFNRFFEEFAKSGTLPPGLAVWLPNIIYLFIAVYLYRK 364 Query: 358 YTK 360 K Sbjct: 365 APK 367 >gi|300935934|ref|ZP_07150887.1| putative inner membrane protein [Escherichia coli MS 21-1] gi|300458870|gb|EFK22363.1| putative inner membrane protein [Escherichia coli MS 21-1] Length = 360 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 48/355 (13%), Positives = 120/355 (33%), Gaps = 3/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ + ++ + + +P + + Sbjct: 7 LDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQI 66 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 67 FFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAP 126 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+A + ++ L+ + ++ + + + Sbjct: 127 QGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNENRRL 186 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + YA + D + + L+ + +P S ++ + L Sbjct: 187 QSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVVALDP 246 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S L N + Y+ ++ Q L + L+++ Sbjct: 247 DALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPM 305 Query: 303 KKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 IS F V F + +P +L F + S++LLM K Sbjct: 306 GVRVVTGISFGFVFYVLDQIFGPLTLVYGISPIIGALLPSASFFLISLWLLMRKS 360 >gi|34540317|ref|NP_904796.1| hypothetical protein PG0501 [Porphyromonas gingivalis W83] gi|34396629|gb|AAQ65695.1| conserved hypothetical protein [Porphyromonas gingivalis W83] Length = 360 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 42/362 (11%), Positives = 115/362 (31%), Gaps = 7/362 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 + + Y+++ +F+ S + I+ ++ V I ++I+ SL +I+ +P Sbjct: 4 LNRLDKYLIKQFLGTFVFSIILIISVSVVFDINEKIDDFMKPEVSLRSIIFDYYFNFVPY 63 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + +E++ + + G S L+ P + A +++I F+ + Sbjct: 64 YANLFSPLFVFISVIFFTSKLAEKSEIIAMLSAGVSFKRLMVPYMLSATVIAILTFLLNS 123 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P + + E++ + ++ Y+ F ++ Sbjct: 124 FVIPPGN-ATRIDFQNKYIKNKKVQYAESVQLEVKKGVFAFFGSYSDAMRTGYQFSLEEF 182 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + + + + + + A+ Sbjct: 183 KGKQLVSRLTADRIQYDSLYNWRIFNYRIRHFGKYKETVESGSEMDTVIAVRPADFLVAE 242 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + L + ++ + E HKR I +I + Sbjct: 243 DDVETMTTTDLHTYISHQKQRGVGNVKLFEIELHKRYAAIFSAFILTIIGASL---SSRK 299 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF-CISSIFLLMIKKKY 358 + I I L +SF + F + + P + +L + ++ + + KK Sbjct: 300 VKGGMGINIAIGLGLSFA-YILFMTVAGTFAISGSLPPFMAAWLPNFVFTVIAVSLYKKA 358 Query: 359 TK 360 + Sbjct: 359 PR 360 >gi|147673657|ref|YP_001217998.1| hypothetical protein VC0395_A2082 [Vibrio cholerae O395] gi|262167531|ref|ZP_06035236.1| predicted permease [Vibrio cholerae RC27] gi|146315540|gb|ABQ20079.1| putative membrane protein [Vibrio cholerae O395] gi|227014390|gb|ACP10600.1| putative membrane protein [Vibrio cholerae O395] gi|262023984|gb|EEY42680.1| predicted permease [Vibrio cholerae RC27] Length = 366 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 53/347 (15%), Positives = 115/347 (33%), Gaps = 19/347 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + ++ + VS +++L I G +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADVSDGEIPTSMILSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LA++ + + + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + L + + L++ F R D + N L +F+ Sbjct: 122 PWSQDKEAHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLYNVFVAQLAPRD 181 Query: 183 THK-----IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + + RQ I L DG + P D I F SY + Sbjct: 182 SILPSVMFSHSGDVKELSDGRQIITLYDGTRYEGVPTRVDYMITNFDSYDGLIGQREVKS 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 LLN ++E R++ V L++++ A Sbjct: 242 AERDWEALPTLSLLN----------NADRRAQAELQWRISL---VVCIPLLTMLVVPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 + ++ + + ++ I F S I ++ I+ L+ Sbjct: 289 VNPRQGRFAKMGPAILIYLTYFLALSATKSAI-EDGSLPVIIGLWPI 334 >gi|307246020|ref|ZP_07528102.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307255001|ref|ZP_07536819.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307259437|ref|ZP_07541162.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306852955|gb|EFM85178.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306861874|gb|EFM93850.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306866373|gb|EFM98236.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 360 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 56/358 (15%), Positives = 120/358 (33%), Gaps = 5/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E YI + I L + ++I++++ V + S ++P+ Sbjct: 6 MNILERYIGKTIIAMIFAVLLMSSGLVFIIKLVEEFKDVGKGSYDALTATYYSLLMLPSD 65 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ +EL+++ ++G SR + V+ AI L +F + Sbjct: 66 IKEFIPVVALIGGLLGLGNLASRSELVVMQSSGFSRFRIGLAVMKTAIPLIVFTMLVSEW 125 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + + + F+ D + +I I L + I D Sbjct: 126 GIPQT-EQYARNMRSIAQSGGSMLSTKGGFWAKDGNDFIYIRHIENERKLNNVSIYHFED 184 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + A + + + L + + S + K + + + L Sbjct: 185 KALKSVTQADNAVF--NGENWTLQRVQTSSLADNSIQQAKEVNKDWQTTITPSKLGIVSL 242 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K ++S L + + + ++ F +++ Q + + L++I Sbjct: 243 KPESLSISGL-SDYVGFLKETGQDSKRFQIAFWRKVYQPISMAVMMLLAISFVFGPLRSS 301 Query: 301 QRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I I F V F + P I L L C+S ++ L+ KK+ Sbjct: 302 AMGTKLFIGIIAGFVFYVSNIVFGNMTLVFSWIPVAIGALIPSLICLSIVWWLLTKKR 359 >gi|242240954|ref|YP_002989135.1| permease YjgP/YjgQ family protein [Dickeya dadantii Ech703] gi|242133011|gb|ACS87313.1| permease YjgP/YjgQ family protein [Dickeya dadantii Ech703] Length = 356 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 120/356 (33%), Gaps = 2/356 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + YI + I + +M+ +V ++ +I+ + ++ V + S+ + +P + Sbjct: 3 RVLDRYIGKTIFNTIMMTLFMLVSLSGIIKFVDQLRKVGQGSYSVLGAGLYTLLSVPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ +EL+++ +G +R+ + V+ AI L + + Sbjct: 63 EIFFPMAALLGALLGLGNLATRSELVVMQASGFTRLQIAGSVMKTAIPLVLLTMAIGEWL 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + + ++ + D + ++ I + N L G+ I + Sbjct: 123 APPG-EQMARNYRSQMMYGGSMLSTQSGLWAKDGNDFVYIQRVQGENELVGVNIYHFDNQ 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + ++ + + E +S S + + L Sbjct: 182 SKLLSVRYAASAVYENGVWQLSQVEESDLRSNKQISGSQTISGEWKTGLTPDKLGVVALD 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + ++ L + N + Y+ +L L + L+++ Sbjct: 242 PDALSIRGLYD-YINYLKQSDQEASRYQLNMWSKLFAPLSVAVMMLMALSFIFGPLRSVP 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I IS F V + + + P + L + +L++K++ Sbjct: 301 AGVRIVIGISFGFLFYVLDQIFGPLSLVYRIPPVLGALLPSALFLFISIMLLLKRR 356 >gi|189465688|ref|ZP_03014473.1| hypothetical protein BACINT_02049 [Bacteroides intestinalis DSM 17393] gi|189433952|gb|EDV02937.1| hypothetical protein BACINT_02049 [Bacteroides intestinalis DSM 17393] Length = 378 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 52/363 (14%), Positives = 124/363 (34%), Gaps = 7/363 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 +K + YI++ +++ + I+ IA V ++++ S I+ +P Sbjct: 20 LKRLDFYIIKKFLGTYVFAIALIISIAVVFDFNEKMDKFMSHEAPWKAIVFDYYLNFVPY 79 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + +TG S +++P + A ++++ F + Sbjct: 80 FANLFSPLFVFISVIFFTSKLAENSEIIAMFSTGMSFKRMLRPYMVSAAIIAVVTFCLGS 139 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + PK T K + + + + T + + Sbjct: 140 YVIPKGSVTRINFEDKYYKQRKSNTARNIQLEVDSGVIAYIERFEDYSKTGYRFSLDKFK 199 Query: 180 DTQTHKIYYAQSGSIDLDR-QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 D Q A+S + D + D + + ++I L E A+ + Sbjct: 200 DKQLVSHLTARSITYDTASVHKWTIKDYMIREMDGMKENIVKGDRIDSILFMEPADFLIM 259 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + L ++ + E+HKR+ I LI + + Sbjct: 260 KNQQEMMTSPELSEYISRQRQRGFANIKEFELEYHKRIAMSFASFILTLIGVSL---SSK 316 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF-CISSIFLLMIKKK 357 + + I L++SF + F I N P++ +++ + + + +K Sbjct: 317 KTKGGMGLHLGIGLALSFS-YILFQTIASTFAVNGNVPPVVAVWIPNILYAFIAFYLYQK 375 Query: 358 YTK 360 K Sbjct: 376 APK 378 >gi|255320991|ref|ZP_05362164.1| permease YjgP/YjgQ family protein [Acinetobacter radioresistens SK82] gi|262379919|ref|ZP_06073074.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] gi|255301955|gb|EET81199.1| permease YjgP/YjgQ family protein [Acinetobacter radioresistens SK82] gi|262298113|gb|EEY86027.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] Length = 366 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 52/361 (14%), Positives = 121/361 (33%), Gaps = 17/361 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + + L+ + I ++++ + + +ILL I GY +P L Sbjct: 2 IIRRYLVKQVVSTSLVVIALLTLIMMGGRLIKYFGVAAQGRLDASILLSIIGYRLPEFLT 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + V + + E+ +++ +G SR L + ++ L ++ + I + Sbjct: 62 LILPLGFFIGLMLVFGRLYVDHEMAVLNGSGISRNRLARLLIPLTLVYMLVQSILMLWMS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +QL+ + F + F S + L+ IF + Sbjct: 122 PWGIRQFEQLTTSQAVRTGFDLVRPKEFISSGPYTIYAGSLSEDHKNLKEIFFYQRAEKP 181 Query: 183 THKIYYAQSGSIDLDRQAI------ILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + L G + P S +F+SY L+ E+ ++ Sbjct: 182 GKPDVMILAKEATRVEMMDDSANVVDLVQGRRYEIYPGQPRYSQAEFESYRLRLENDKTA 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L +P SE R+ ++ ++++ Sbjct: 242 NFESDDVAALTTSKLWEQRADPV--------VESELGWRIFVPFAIMVALILAMAL---S 290 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + ++ + +F +L I + I + ++ I L + L +K Sbjct: 291 EVSPRQGRYMKLFPALLIFASLIVALMAIKTRASKDEIGIWAYPAVLLVYAVAGALFSRK 350 Query: 357 K 357 + Sbjct: 351 Q 351 >gi|16767725|ref|NP_463340.1| permease [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56416251|ref|YP_153326.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161617774|ref|YP_001591739.1| hypothetical protein SPAB_05637 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167551264|ref|ZP_02345019.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167991269|ref|ZP_02572368.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168232820|ref|ZP_02657878.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168234610|ref|ZP_02659668.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168244031|ref|ZP_02668963.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168262477|ref|ZP_02684450.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168464638|ref|ZP_02698541.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168821095|ref|ZP_02833095.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194446562|ref|YP_002043719.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194449673|ref|YP_002048503.1| hypothetical protein SeHA_C4884 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194470492|ref|ZP_03076476.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194738007|ref|YP_002117400.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197249048|ref|YP_002149399.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197262055|ref|ZP_03162129.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197365174|ref|YP_002144811.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198242808|ref|YP_002218343.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200388381|ref|ZP_03214993.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205355211|ref|YP_002229012.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207859605|ref|YP_002246256.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|238910635|ref|ZP_04654472.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|16423045|gb|AAL23299.1| putative permease [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56130508|gb|AAV80014.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161367138|gb|ABX70906.1| hypothetical protein SPAB_05637 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194405225|gb|ACF65447.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194407977|gb|ACF68196.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194456856|gb|EDX45695.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194713509|gb|ACF92730.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195632823|gb|EDX51277.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197096651|emb|CAR62266.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197212751|gb|ACH50148.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197240310|gb|EDY22930.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197292043|gb|EDY31393.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197937324|gb|ACH74657.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199605479|gb|EDZ04024.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205274992|emb|CAR40066.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205323911|gb|EDZ11750.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205330351|gb|EDZ17115.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205333019|gb|EDZ19783.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205337021|gb|EDZ23785.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205342262|gb|EDZ29026.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205348818|gb|EDZ35449.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206711408|emb|CAR35787.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|261249568|emb|CBG27435.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267996824|gb|ACY91709.1| putative permease [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301160964|emb|CBW20498.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312915576|dbj|BAJ39550.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|322615643|gb|EFY12563.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618703|gb|EFY15592.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322621884|gb|EFY18734.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627609|gb|EFY24400.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322630915|gb|EFY27679.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637866|gb|EFY34567.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642324|gb|EFY38930.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322643901|gb|EFY40449.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322651023|gb|EFY47408.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322656724|gb|EFY53012.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659852|gb|EFY56095.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322661937|gb|EFY58153.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322666315|gb|EFY62493.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322672734|gb|EFY68845.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676164|gb|EFY72235.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680648|gb|EFY76686.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684458|gb|EFY80462.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323132817|gb|ADX20247.1| putative permease [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323194205|gb|EFZ79402.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323197350|gb|EFZ82490.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201532|gb|EFZ86596.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206046|gb|EFZ91008.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213057|gb|EFZ97859.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215428|gb|EGA00172.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323219412|gb|EGA03897.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227716|gb|EGA11870.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323228886|gb|EGA13015.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323236502|gb|EGA20578.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239997|gb|EGA24044.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323241956|gb|EGA25985.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323247895|gb|EGA31832.1| lipopolysaccharide ABC transporter permease [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251467|gb|EGA35338.1| lipopolysaccharide ABC transporter permease [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258167|gb|EGA41844.1| lipopolysaccharide ABC transporter permease [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323263687|gb|EGA47208.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323265717|gb|EGA49213.1| lipopolysaccharide ABC transporter permease [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270161|gb|EGA53609.1| lipopolysaccharide ABC transporter permease [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326626151|gb|EGE32496.1| putative permease [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326630369|gb|EGE36712.1| putative permease [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|332991289|gb|AEF10272.1| putative permease [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 360 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 45/354 (12%), Positives = 113/354 (31%), Gaps = 2/354 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ + ++ + +P + + Sbjct: 7 LDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGNYDALGAGMYTLLSVPKDIQI 66 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 67 FFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAP 126 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+A + ++ L+ + ++ + + Sbjct: 127 QGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELAGISIYAFNDQRRL 186 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + YA S D + + L+ + +P S ++ + L Sbjct: 187 QSVRYAASAKFDPEHKVWRLSQVDESDLQNPKQITGSQTVSGTWKTNLTPDKLGVVALDP 246 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S L N + Y+ ++ Q L + L+++ Sbjct: 247 DALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPM 305 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 IS F V + + P + L LM++K Sbjct: 306 GVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIVGALLPSASFFLISLWLMLRK 359 >gi|204927347|ref|ZP_03218549.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204324012|gb|EDZ09207.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 360 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 45/354 (12%), Positives = 113/354 (31%), Gaps = 2/354 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ + ++ + +P + + Sbjct: 7 LDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGNYDALGAGMYTLLSVPKDIQI 66 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 67 FFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAP 126 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+A + ++ L+ + ++ + + Sbjct: 127 QGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELAGISIYAFNDQRRL 186 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + YA S D + + L+ + +P S ++ + L Sbjct: 187 QSVRYAASAKFDPEHKVWRLSQVDESDLQNPKQITGSQTVSGTWKTNLTPDKLGVVALDP 246 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S L N + Y+ ++ Q L + L+++ Sbjct: 247 DALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPM 305 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 IS F V + + P + L LM++K Sbjct: 306 GVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPVVGALLPSASFFLISLWLMLRK 359 >gi|187731850|ref|YP_001882954.1| putative permease [Shigella boydii CDC 3083-94] gi|187428842|gb|ACD08116.1| putative permease [Shigella boydii CDC 3083-94] Length = 360 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 46/355 (12%), Positives = 116/355 (32%), Gaps = 3/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ + ++ + + +P + Sbjct: 7 LDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQT 66 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 67 FFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAP 126 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+A + ++ L+ + ++ + + + Sbjct: 127 QGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNENRRL 186 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + YA + D + + L+ + +P S ++ + L Sbjct: 187 QSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVVALDP 246 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S L N + Y+ ++ Q L + L+++ Sbjct: 247 DALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPM 305 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P I L L I L ++ +K Sbjct: 306 GVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGAL-LPSASFFLISLWLLMRK 359 >gi|330997889|ref|ZP_08321723.1| permease, YjgP/YjgQ family [Paraprevotella xylaniphila YIT 11841] gi|329569493|gb|EGG51263.1| permease, YjgP/YjgQ family [Paraprevotella xylaniphila YIT 11841] Length = 368 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 50/364 (13%), Positives = 118/364 (32%), Gaps = 9/364 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPTV 60 ++Y+++ ++ S I+ IA V + I+ +++ I+ + +P Sbjct: 9 SKLDVYLIKKFLGTYFFSIALIISIAVVFDFNENIDKFTTNHAPWKGIIFEYYANFVPYF 68 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +P + + + N+E++ + G S L++P + A ++++ F+ Sbjct: 69 SNLFSPLFVFISVIFFTSKLAENSEIIAMMAAGMSFKRLMRPYMISAAIIAVMTFLLGAY 128 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + PK T + + + + T + + Sbjct: 129 VIPKGSVTRLNFENTYKKKKRTEFAQNVQLQVDTGVIAFIEHFDGRTKTGYHFSLDKFVN 188 Query: 181 TQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A S S D +R +N+ + + + IS + E ++ Sbjct: 189 KKLVSHLTAASVSYDTLSDERYHWRINNYTLRELKGMREYISHGSRIDSIIAMEPSDFLL 248 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L ++ + E+ KR I +I + A Sbjct: 249 TRNQQETLTSPELKEYIVKQRARGSGNVKPFEVEYQKRFATPFASFILTIIGLSL---SA 305 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF-CISSIFLLMIKK 356 R+ + I L++S + F + N + P L +L I + + K Sbjct: 306 RKRKGGMGLYLGIGLALS-ASYILFQTVSSTFAINADWPPALAAWLPNIIFAFIAFFLYK 364 Query: 357 KYTK 360 K + Sbjct: 365 KAPQ 368 >gi|312142844|ref|YP_003994290.1| permease YjgP/YjgQ family protein [Halanaerobium sp. 'sapolanicus'] gi|311903495|gb|ADQ13936.1| permease YjgP/YjgQ family protein [Halanaerobium sp. 'sapolanicus'] Length = 1063 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 55/344 (15%), Positives = 120/344 (34%), Gaps = 8/344 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YIL+ + FL+ I I +L+ +++ ++ Y +P V+ Sbjct: 4 KLMDKYILKEVSYPFLLGVFIITIILVGSYFFHLADLIIVKNVPFSLVFRLLLYRLPGVM 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P T + +NR E+ + G S L+ P+ L +L+S F F+ I Sbjct: 64 VETFPIAVLFATMTAINRLNRENEITALRMGGVSIFRLVLPLFILGLLISSFTFLLNENI 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + + L E +FF+ +S YN ++ ++ + Sbjct: 124 VPWTNHQAQNIIRQTILKDAMPDPESEVFFQGPRGRLFYVSSYNQSSGELKNIVIYQLAS 183 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI--V 239 + + ++ A +LN G +H+ + + I KF ++ + Sbjct: 184 EAEFPEVITAVDGLVEDNAWLLNTGIIHQYNQGGEIILESKFNQMEIELTDQMREVMGTQ 243 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + + L + + ++H +L + L ++F + + Sbjct: 244 KSTAEMSRGELGRR-IELFRRSGIGVNSLLVDYHLKLAEPLAALLF-----ILISLPLSL 297 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 ++ FI I +++ +N P+L +L Sbjct: 298 SSKESSTWNFILTIIIVFLYYVVLSFSRSFGRNEVLSPLLAAWL 341 >gi|258622808|ref|ZP_05717826.1| conserved hypothetical protein [Vibrio mimicus VM573] gi|258584996|gb|EEW09727.1| conserved hypothetical protein [Vibrio mimicus VM573] Length = 366 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 54/357 (15%), Positives = 118/357 (33%), Gaps = 19/357 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + ++ + S +++L I G +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASDGEIPTSMILSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LA++ + + + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAGFNALWLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + QL + + L++ F R D + N L +F+ Sbjct: 122 PWSQDKEAQLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLHNVFVAQLAPRD 181 Query: 183 THK-----IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + RQ I L +G + P D I F SY + Sbjct: 182 SILPSVMFSNSGDVKELSDGRQIITLYNGTRYEGVPTRVDYMITNFDSYDGLIGQREVKS 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 LL ++E RL+ V L++++ A Sbjct: 242 SGRDWEALPTLSLL----------KNSDLQAQAELQWRLSL---VVCIPLLTMLVVPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + ++ + + ++ I F S I ++ I+ L+ + +F +I Sbjct: 289 VNPRQGRFAKMGPAILIYLTYFLALSATKSAI-EDGSLPVIIGLWPVNAALLFAALI 344 >gi|294492514|gb|ADE91270.1| putative permease [Escherichia coli IHE3034] gi|307629338|gb|ADN73642.1| hypothetical protein UM146_21570 [Escherichia coli UM146] gi|315288387|gb|EFU47785.1| putative inner membrane protein [Escherichia coli MS 110-3] gi|323950669|gb|EGB46547.1| inner membrane protein yjgQ [Escherichia coli H252] gi|323955548|gb|EGB51312.1| inner membrane protein yjgQ [Escherichia coli H263] Length = 360 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 46/355 (12%), Positives = 117/355 (32%), Gaps = 3/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ + ++ + + +P + + Sbjct: 7 LDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQI 66 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 67 FFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAP 126 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+A + ++ L+ + ++ + + + Sbjct: 127 QGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNENRRL 186 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + YA + D + + L+ + +P S ++ + L Sbjct: 187 QSVRYAAAAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVVALDP 246 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S L N + Y+ ++ Q L + L+++ Sbjct: 247 DALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPM 305 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P I L L I L ++ +K Sbjct: 306 GVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGAL-LPSASFFLISLWLLMRK 359 >gi|288799848|ref|ZP_06405307.1| membrane protein [Prevotella sp. oral taxon 299 str. F0039] gi|288333096|gb|EFC71575.1| membrane protein [Prevotella sp. oral taxon 299 str. F0039] Length = 377 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 50/363 (13%), Positives = 122/363 (33%), Gaps = 9/363 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPTV 60 K + YI++ +++ S L I+ +A V + + + + L I+ +P Sbjct: 18 KILDWYIIKKFIGTYIFSILLIISVAIVFDVNENLARFAQYHAPLKAIVFDYYANFVPYF 77 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +P + + + N+E++ I G S L++P + L+S+ + + Sbjct: 78 ANLFSPLFVFIAVIFFTSKLAGNSEIISILAAGVSFKRLMRPYMISCALISMLSYYLSSN 137 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + A + + + L + N + G + + Sbjct: 138 VIPHGTVIRQNFEALYKNKTKNTSADNVLLQVDKGVIAYIQHYDNNSKRGYGFSLDKFNN 197 Query: 181 TQTHKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A I + +++ + + + + I+ + + E + Sbjct: 198 KKLVSHLTATEIQYDTISDTKYHWTISNWKTRKLEGLKEKITTGAQRDTIIMMEPTDLVY 257 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + L + + + Y+ E+HKR+ I I + + Sbjct: 258 SKGQQETFTSAQLQDYISKQIDRGSSNVVQYQVEYHKRIASSFASFILTTIGLSL---SS 314 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF-CISSIFLLMIKK 356 R+ + I L++SFG + + N PI+ ++ I S+ + Sbjct: 315 RKRKGGMGLYMGIGLALSFG-YIMLQTVSATFAINANTPPIIAAWIPNIIFSLVAYFCYR 373 Query: 357 KYT 359 K Sbjct: 374 KAP 376 >gi|291514726|emb|CBK63936.1| Predicted permeases [Alistipes shahii WAL 8301] Length = 367 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 50/363 (13%), Positives = 121/363 (33%), Gaps = 8/363 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPTV 60 K + YIL ++ + I+ I V +++I+ + L +++L IP Sbjct: 9 KILDRYILGKFLSTYFFAIAMIIVIVVVFDYVEKIDDFTELHAPLKSVILDYYLNFIPYF 68 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + + + M TE++ + + G S L+ P A++++ Sbjct: 69 INQFSGLFTFIACIFFTSKMAYQTEIVAMLSGGMSFRRLMWPYFLGALIIASLSLTLNLW 128 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + I + + + +++ +++ ++ I YN F+++ + Sbjct: 129 LIPISQRHIVAFEQQYIKRKQNTKYDRHIYRQIEPGIFAYIRGYNDGARQASFFVLERYE 188 Query: 181 TQTHKIYYAQS-GSIDLDRQAIILNDGEVHRKSP-ISKDISIMKFKSYTLQTESANSSTI 238 + T S + + + ++ + + E+ I Sbjct: 189 SGTMTHSLEASDAKFNPETKRWTAPRYTKREFDSAGTETFEQFRNLDTLINLEATELGEI 248 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 N+S L + + E H R L I LI + + Sbjct: 249 NDLIQTMNISELNAFLDQQRAKGSDSINLIEVEKHARYAYPLSTFILTLIGVSL---SSR 305 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL-LMIKKK 357 + I I + F + F+ + ++ P L ++L I + + + + +K Sbjct: 306 KVRGGTGLHIGIGTGLCFS-YILFNRFFEEFAKSGTLPPGLAVWLPNIIYLGIAVYLYRK 364 Query: 358 YTK 360 K Sbjct: 365 APK 367 >gi|110637606|ref|YP_677813.1| permease [Cytophaga hutchinsonii ATCC 33406] gi|110280287|gb|ABG58473.1| conserved hypothetical protein; possible permease [Cytophaga hutchinsonii ATCC 33406] Length = 359 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 51/359 (14%), Positives = 123/359 (34%), Gaps = 2/359 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILL-KISGYLIPT 59 MK +LYI++ ++ L + + VI I +++ S+ +L + IP Sbjct: 1 MKKLDLYIIKKFLVTYFFVVLMFMLVITVIDITEKMEDFMKHKLSIWFILVEYYFAFIPY 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +++P + T V ++ TE++ + ++G S ++ P L +IL++ +F Sbjct: 61 MANLLSPITIFIATIFVTANLAARTEIIAMLSSGMSLTRIMYPYLIGSILIAFMVFYMSG 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P K + F S + N + Sbjct: 121 WLIPHGNKKRVDFEKKYIKSTFFYEGRNVHMKTAPTTYVYIESYNSEINVGYQFTLETII 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI-SKDISIMKFKSYTLQTESANSSTI 238 D + A + + + + + + R + +++ + L + Sbjct: 181 DNRLVSKLKAARMNWNDSTKKWRMEEYFIRRFTEDGKEEVFKGRGLDTALTITPKDFEDT 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + ++ L N E + TY +E ++R T +I LI ++A+ +++ Sbjct: 241 YMLFETYDMGELNNQIALLEARGSENISTYITEKYQRYTYPFSVIILTLIGVIASSRKSR 300 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I F+ + + + P + + +F + + + K Sbjct: 301 EGAGLTIAFGFLLAFVYIIFMITSRSLANVGGIGPLFASWIPNIVFIVIGLIMYRRVPK 359 >gi|209921759|ref|YP_002295843.1| hypothetical protein ECSE_4568 [Escherichia coli SE11] gi|209915018|dbj|BAG80092.1| conserved hypothetical protein [Escherichia coli SE11] Length = 360 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 46/355 (12%), Positives = 117/355 (32%), Gaps = 3/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ + ++ + + +P + + Sbjct: 7 LDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQI 66 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 67 FFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAP 126 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+A + ++ L+ + ++ + + + Sbjct: 127 QGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEEFGGISIYAFNENRRL 186 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + YA + D + + L+ + +P S ++ + L Sbjct: 187 QSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVVALDP 246 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S L N + Y+ ++ Q L + L+++ Sbjct: 247 DALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPM 305 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P I L L I L ++ +K Sbjct: 306 GVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGAL-LPSASFFLISLWLLMRK 359 >gi|281603538|gb|ADA76522.1| Inner membrane protein yjgQ [Shigella flexneri 2002017] Length = 361 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 46/355 (12%), Positives = 117/355 (32%), Gaps = 3/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ + ++ + + +P + + Sbjct: 8 LDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQI 67 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 68 FFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAP 127 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+A + ++ L+ + ++ + + + Sbjct: 128 QGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEVLGGISIYAFNENRRL 187 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + YA + D + + L+ + +P S ++ + L Sbjct: 188 QSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTDLTPDKLGVVALDP 247 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S L N + Y+ ++ Q L + L+++ Sbjct: 248 DALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPM 306 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P I L L I L ++ +K Sbjct: 307 GVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGAL-LPSASFFLISLWLLMRK 360 >gi|82779328|ref|YP_405677.1| hypothetical protein SDY_4286 [Shigella dysenteriae Sd197] gi|81243476|gb|ABB64186.1| conserved hypothetical protein [Shigella dysenteriae Sd197] Length = 361 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 46/355 (12%), Positives = 116/355 (32%), Gaps = 3/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ + ++ + + +P + + Sbjct: 8 LDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQI 67 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ +G +R+ + V+ AI L + P Sbjct: 68 FFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWAAP 127 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+A + ++ L+ + ++ + + + Sbjct: 128 QGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNENRRL 187 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + YA + D + + L+ + +P S ++ + L Sbjct: 188 QSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVVALDP 247 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S L N + Y+ ++ Q L + L+++ Sbjct: 248 DALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPM 306 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P I L L I L ++ +K Sbjct: 307 GVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGAL-LPSASFFLISLWLLMRK 360 >gi|152978628|ref|YP_001344257.1| permease YjgP/YjgQ family protein [Actinobacillus succinogenes 130Z] gi|150840351|gb|ABR74322.1| permease YjgP/YjgQ family protein [Actinobacillus succinogenes 130Z] Length = 354 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 44/357 (12%), Positives = 127/357 (35%), Gaps = 4/357 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + E YI + I + + L +V ++ +I+ +++ V T + + IP Sbjct: 1 MNTLERYIGKSILGTIFATLLTLVGLSAIIKFVEQFRSVGKGTYDSLQAVLYTILTIPKD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ +EL+++ + G SR+ + V+ AI L + + Sbjct: 61 VETFFPMAALLGALIALGNLASRSELIVMQSAGFSRLKIGIAVMKTAIPLVLITMVIGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + + AKA + ++ +++ + +D + + + L+ ++I + Sbjct: 121 GIPQTEQYARDMRAKAISGGSLMSVKNSVWAKDGNDFIF-VRQVREDANLRDVYIYHFDN 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 Q ++ +A S + + + + + + + + L Sbjct: 180 RQLQRLSHANSATYERGKWQLHQLNVSD--IQAEQIFTKNYVSQEWKTSLTPDKLGIVSL 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + ++S L + + + + + + ++L Q + + ++++ Sbjct: 238 RPTSLSISGL-SEYIAFLHQTGQDSKKFELTYWRKLFQPISVGVMMMLALSFIFGPLRSV 296 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I F V + + + L + + + L+ +K+ Sbjct: 297 TAGARIVTGICFGFLFYVINEIFGPLSLVYNVTPIVGALMPSILFLVITWWLLSRKR 353 >gi|34498371|ref|NP_902586.1| hypothetical protein CV_2916 [Chromobacterium violaceum ATCC 12472] gi|34104225|gb|AAQ60584.1| conserved hypothetical protein [Chromobacterium violaceum ATCC 12472] Length = 358 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 44/352 (12%), Positives = 116/352 (32%), Gaps = 2/352 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YI+ + +S L + L ++ + +L + + + + ++ LIP Sbjct: 1 MKLIHRYIVSTLTQSTLFTLLALLGLYGFFDLLGEVPALGTGNYTAGVMATYVALLIPGH 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + +T + ++E +I +G + + +L + ++ + Sbjct: 61 AYELMPLAVLIGGMVAMTQLASSSEYTVIRTSGVTLKQIAATLLKFGLGFAVLTILLGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P ++ A ++ + + + + N L +D Sbjct: 121 AAPWAMQEAERTRLTATHSIVAKEFRSGTWVKDNQNFINVHEMLPDNTLLGIRIYTYDQD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + A+ G+ ++ L + + +P ++ + E S +++ Sbjct: 181 FKLERTRIAERGTFSKQDRSWQLENVKETVLAPNRTISAVYPTLKWKSIVEPEILSVLLV 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + LL + + + Y +L L + L+++ ++ Sbjct: 241 VPEQMSAHNLL-TYIEHLKKNKQQTQRYEIALWSKLFYPLACISMALVALAFTPQQRRHG 299 Query: 301 QRKKIHPIFISLSISF-GVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 Q I L ++F V F ++ + N L +F + I + Sbjct: 300 QLGIKLFAGICLGVTFHFVNRLFGHLGLLYDWNAILSATLPTLIFLLGGIAI 351 >gi|323166626|gb|EFZ52385.1| hypothetical protein SS53G_3092 [Shigella sonnei 53G] Length = 360 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 45/355 (12%), Positives = 116/355 (32%), Gaps = 3/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ + ++ + + +P + + Sbjct: 7 LDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQI 66 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ +G +R+ + V+ AI L + + Sbjct: 67 FFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAS 126 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+A + ++ L+ + ++ + + + Sbjct: 127 QGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNENRRL 186 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + YA + D + + L+ + +P S ++ + L Sbjct: 187 QSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVVALDP 246 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S L N + Y+ ++ Q L + L+++ Sbjct: 247 DALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPM 305 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P I L L I L ++ +K Sbjct: 306 GVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGAL-LPSASFFLISLWLLMRK 359 >gi|209964086|ref|YP_002297001.1| predicted permease YjgP [Rhodospirillum centenum SW] gi|209957552|gb|ACI98188.1| predicted permease YjgP [Rhodospirillum centenum SW] Length = 359 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 43/354 (12%), Positives = 115/354 (32%), Gaps = 2/354 (0%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y+ R L + + + ++ +L + V +L L + +P+++ Sbjct: 4 TLARYLSRQFLVRSLAVLVALTALLQLLDLLDAASRVLERGGALGDLGTYALLRLPSIVE 63 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + + L + +N E++ + + G + L+ ++ A+ +++F I + I Sbjct: 64 RLVPLAVLVGSLTTLYGLVQNNEIVAMRSAGLTPYQLLATLMPAAVAIAVFHLILSDQIA 123 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI-VDSRDT 181 P+ A+ + L I ++ + + + RD Sbjct: 124 PRAERAFLTWWAETEPPTDDDLPLAEKKLWLRVGNTIVAAERVLERGARLEQVSLYPRDD 183 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 Q ++ + L DG + + ++ AN ++ Sbjct: 184 QGRVTERTRAAAAVYGDGNWTLLDGTRLDLTRGDFKAEPFARAPWPVRLHPANVVEVLQP 243 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + L L + + + Y + H+ L +I L++ A Sbjct: 244 TENIPLLRLRSILRGD-WAGRQSPAYYETRLHETYAGPLATLIMVLLAAPVAHGMRRSGA 302 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + I + +++ + G + + P I +F + +++ Sbjct: 303 VGGSMALGIGIGLTYLLADGMLAALGEAGAMPAVIAAWAPTVFFAAVGGAILVH 356 >gi|254481253|ref|ZP_05094498.1| putative permease, YjgP/YjgQ family [marine gamma proteobacterium HTCC2148] gi|214038416|gb|EEB79078.1| putative permease, YjgP/YjgQ family [marine gamma proteobacterium HTCC2148] Length = 353 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 43/357 (12%), Positives = 106/357 (29%), Gaps = 4/357 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + ++ + + L+ IV + + + + + S T + + +P Sbjct: 1 MRKLDRHVGWTVFVAILLVLAIIVGLDAIAAFIDEADDI-SKTYTFGQVGLYILLTLPGR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L PF + L + ++EL+++ G S L+ + A+L++I F Sbjct: 60 LYEFIPFAALIGCMLGLGQLATSSELVVMRAAGVSTGRLVWVAMKPALLIAIMGFSLGEF 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ + A AQ ++ R + + + D Sbjct: 120 VAPETEQMAETQRALAQNPGESFGGRYGIWNREGNTFLHFNAVEAGGVVHGITMLEFDED 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 A+ S + + D + S + + + + + Sbjct: 180 LLMEYSLRARRASF--EGGYWTMEDAVLTNFSSWQTTRETHEVMRWDTGITPELLTVMAV 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + +S L + + + Y+ ++ Q L++I Sbjct: 238 EPEYLPISDLYRFS-RYLQSQGLDSDDYQLALWGKILQPAAIGALVLVAISFIFGPLREG 296 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + I F + L L C ++ LL+++ + Sbjct: 297 TMGFRIFAGVIVGIVFRTSQDLLGPASLVFGFAPIYAALVPILLCGAAGMLLLLRAR 353 >gi|15804854|ref|NP_290895.1| hypothetical protein Z5874 [Escherichia coli O157:H7 EDL933] gi|26251171|ref|NP_757211.1| hypothetical protein c5363 [Escherichia coli CFT073] gi|254037286|ref|ZP_04871363.1| conserved hypothetical protein [Escherichia sp. 1_1_43] gi|291285674|ref|YP_003502492.1| Inner membrane protein yjgQ [Escherichia coli O55:H7 str. CB9615] gi|332281055|ref|ZP_08393468.1| conserved hypothetical protein [Shigella sp. D9] gi|12519274|gb|AAG59461.1|AE005658_3 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933] gi|26111603|gb|AAN83785.1|AE016771_296 Hypothetical protein yjgQ [Escherichia coli CFT073] gi|537104|gb|AAA97159.1| ORF_o361 [Escherichia coli str. K-12 substr. MG1655] gi|13364717|dbj|BAB38662.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai] gi|209749438|gb|ACI73026.1| hypothetical protein ECs5239 [Escherichia coli] gi|209749440|gb|ACI73027.1| hypothetical protein ECs5239 [Escherichia coli] gi|209749442|gb|ACI73028.1| hypothetical protein ECs5239 [Escherichia coli] gi|209749444|gb|ACI73029.1| hypothetical protein ECs5239 [Escherichia coli] gi|209749446|gb|ACI73030.1| hypothetical protein ECs5239 [Escherichia coli] gi|226840392|gb|EEH72394.1| conserved hypothetical protein [Escherichia sp. 1_1_43] gi|290765547|gb|ADD59508.1| Inner membrane protein yjgQ [Escherichia coli O55:H7 str. CB9615] gi|332103407|gb|EGJ06753.1| conserved hypothetical protein [Shigella sp. D9] Length = 361 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 46/355 (12%), Positives = 117/355 (32%), Gaps = 3/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ + ++ + + +P + + Sbjct: 8 LDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQI 67 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 68 FFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAP 127 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+A + ++ L+ + ++ + + + Sbjct: 128 QGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNENRRL 187 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + YA + D + + L+ + +P S ++ + L Sbjct: 188 QSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVVALDP 247 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S L N + Y+ ++ Q L + L+++ Sbjct: 248 DALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPM 306 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P I L L I L ++ +K Sbjct: 307 GVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGAL-LPSASFFLISLWLLMRK 360 >gi|152987845|ref|YP_001346668.1| hypothetical protein PSPA7_1283 [Pseudomonas aeruginosa PA7] gi|150963003|gb|ABR85028.1| membrane protein, putative [Pseudomonas aeruginosa PA7] Length = 372 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 43/365 (11%), Positives = 123/365 (33%), Gaps = 25/365 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + + ++ I + ++ + + L I + IP L Sbjct: 2 IVFRYLSREVLVTMSAVSAVLLVIIMSGRFIKYLAQAAQGLLDPGSLFLIMAFRIPGFLQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ TG S+ L+ + A+L++I + + Sbjct: 62 LILPLGLFLGILLAYGRLYLESEMTVLSATGMSQKRLLGYTMAPALLVAILVAWLSLFLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P+ + L K F L F + D + ++ + + I S+ Sbjct: 122 PQGINQFALLLNKQDTLTEFDTLVPGRFQAMRDGTRVTYTEELSKDRGELAGIFISQKDL 181 Query: 183 THKIYYAQSGSIDLDR----------QAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 + ++ + +IL++G + +P + +K+ +Y + Sbjct: 182 NSSNQERGISILVAEKGTQNIQADGSRYLILHNGYRYDGNPGQANYRAIKYDTYGVMLPK 241 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 +S+ V + + L Y++E RL+ L + L+++ Sbjct: 242 PEASSEVSERDAVPTVDLF----------GSDNPRYQAELQWRLSTPLLVFVVTLLAVPL 291 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIF 350 + ++ + + ++ + + ++ + P + + ++ ++ Sbjct: 292 ---SRVNPRQGRFLKLLPAILLYMAYLALLIAVRGQLDKGKIPMAVGLWWVHGLFLAIGL 348 Query: 351 LLMIK 355 +L Sbjct: 349 ILFYW 353 >gi|170718033|ref|YP_001785073.1| permease YjgP/YjgQ family protein [Haemophilus somnus 2336] gi|168826162|gb|ACA31533.1| permease YjgP/YjgQ family protein [Haemophilus somnus 2336] Length = 356 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 49/357 (13%), Positives = 127/357 (35%), Gaps = 3/357 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + + YI + I + L + L +V ++ +I+ +++ + T + + +P Sbjct: 2 MNTLDRYIGKNILGTILATLLMLVGLSAIIKFVEQFRSIGKGTYDVIQATLFTLLTMPKD 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + L ++ +EL++I + G SR + V+ A+ L + I Sbjct: 62 IETFFPMAALLGSLIALGNLASRSELIVIQSAGFSRFRIGLAVMKTALPLMLITMIIGEW 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + ++ +N + D + +I + + + +L I+I D Sbjct: 122 GIPQTEH-FARDMRAKAISGGSMLSVKNSIWAKDGNDFIYVGRITNDISLNDIYIYSFDD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + K + + + + + + K I+ +K +++ L Sbjct: 181 KRQLKQVTHANQASFEHGKWKLSGINQSQIFADEIKTINRLK-DNWSTTLTPDKLGIASL 239 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + +++ L N + + + F +++ Q + + L+++ Sbjct: 240 RPTSLSMTGLYN-YIKFMKETGQDAKRFELTFWQKVFQPVSVAVMMLLALSFIFGSLRSV 298 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I F V + + P + L L + I+ L+ +K+ Sbjct: 299 TAGARIVTGIFFGFLFYVINEILGRLSLLYDIPIVLAALIPSLLFMILIWWLLNRKR 355 >gi|260427738|ref|ZP_05781717.1| permease, YjgP/YjgQ family [Citreicella sp. SE45] gi|260422230|gb|EEX15481.1| permease, YjgP/YjgQ family [Citreicella sp. SE45] Length = 364 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 37/359 (10%), Positives = 109/359 (30%), Gaps = 13/359 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y R F+ ++ ++++I S ++I+ +P + Sbjct: 2 ILHRYFARRFFWMFMSILSVFAIFVGLVDLVEQIRKF-GGDISFAQKVQITALRLPEGMY 60 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + T + + R++EL+++ G S +T + + +A+ +S N + Sbjct: 61 EILPLVMILATAALFLMLARSSELVVVRAAGRSGLTALMGPMMVALAISGVTVAMLNPLV 120 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFR------LDDDLYIKISKYNPNNTLQGIFIV 176 L+ + + L + + Sbjct: 121 AATSKRASDLAESYENDGASVISIGKEGLWLRQGSSDGQAVIRAARANPDATVLYDVSFL 180 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL--QTESAN 234 + + + D + + + + + + + + + Sbjct: 181 QYAEDGGPIRRVEAAEAALEDGAWALRDAKVWPLGTRANPEAAAERHDRLRIASDLTQND 240 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 K + + L + N + F L + +F V L++ A Sbjct: 241 IRDRFGKPSAVAIWDLPD-FINGLEQAGFSARRHEVWFQMELARPIFLVAMVLVA--AGF 297 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 R + + ++ + FG+++ ++ + +N P+ ++ ++S+ L + Sbjct: 298 TMRPARLGRTGLYVLAAVLLGFGLYYVRNFAQ-IMGENGQLPPLFAAWVPPVASLMLAL 355 >gi|283786944|ref|YP_003366809.1| permease [Citrobacter rodentium ICC168] gi|282950398|emb|CBG90046.1| putative permease [Citrobacter rodentium ICC168] Length = 360 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 47/355 (13%), Positives = 114/355 (32%), Gaps = 3/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ + ++ + +P + + Sbjct: 7 LDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGNYDALGAGMYTLLSVPKDVQI 66 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 67 FFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAP 126 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+A + ++ L+ + + + + Sbjct: 127 QGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNSFVYIERVKGDEELGGISIYAFNDQRRL 186 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + YA S D +++ L+ + P S ++ + L Sbjct: 187 QSVRYAASAKFDPEQKVWRLSQVDESSLQDPKQITGSQTVSGTWKTNLTPDKLGVVALDP 246 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S L N + Y+ ++ Q L + L+++ Sbjct: 247 DALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPM 305 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P I L L I L ++ +K Sbjct: 306 GVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPVIGAL-LPSASFFFISLWLMMRK 359 >gi|188995335|ref|YP_001929587.1| hypothetical protein PGN_1471 [Porphyromonas gingivalis ATCC 33277] gi|188595015|dbj|BAG33990.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC 33277] Length = 363 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 42/362 (11%), Positives = 115/362 (31%), Gaps = 7/362 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 + + Y+++ +F+ S + I+ ++ V I ++I+ SL +I+ +P Sbjct: 7 LNRLDKYLIKQFLGTFVFSIILIISVSVVFDINEKIDDFMKPEVSLRSIIFDYYFNFVPY 66 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + +E++ + + G S L+ P + A +++I F+ + Sbjct: 67 YANLFSPLFVFISVIFFTSKLAEKSEIIAMLSAGVSFKRLMVPYMLSATVIAILTFLLNS 126 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P + + E++ + ++ Y+ F ++ Sbjct: 127 FVIPPGN-ATRIDFQNKYIKNKKVQYAESVQLEVKKGVFAFFGSYSDAMRTGYQFSLEEF 185 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + + + + + + A+ Sbjct: 186 KGKQLVSRLTADRIQYDSLYNWRIFNYRIRHFGKYKETVESGSEMDTVIAVRPADFLVAE 245 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + L + ++ + E HKR I +I + Sbjct: 246 DDVETMTTTDLHTYISHQKQRGVGNVKLFEIELHKRYAAIFSAFILTIIGASL---SSRK 302 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF-CISSIFLLMIKKKY 358 + I I L +SF + F + + P + +L + ++ + + KK Sbjct: 303 VKGGMGINIAIGLGLSFA-YILFMTVAGTFAISGSLPPFMAAWLPNFVFTVIAVFLYKKA 361 Query: 359 TK 360 + Sbjct: 362 PR 363 >gi|170767103|ref|ZP_02901556.1| putative permease [Escherichia albertii TW07627] gi|170124541|gb|EDS93472.1| putative permease [Escherichia albertii TW07627] Length = 360 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 48/355 (13%), Positives = 116/355 (32%), Gaps = 3/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M +V ++ +I+ + ++ + + +P + + Sbjct: 7 LDRYIGKTIFTTIMMMLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQI 66 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ +G +R+ + V+ AI L + I P Sbjct: 67 FFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAMGEWIAP 126 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+A + ++ L+ + ++ + + + Sbjct: 127 QGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNENRRL 186 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + YA S D + + L+ + +P S ++ + L Sbjct: 187 QSVRYAASAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVVALDP 246 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S L N + Y+ ++ Q L + L+++ Sbjct: 247 DALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPM 305 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P I L L I L ++ +K Sbjct: 306 GVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGAL-LPSASFFVISLWLLMRK 359 >gi|114768924|ref|ZP_01446550.1| Predicted permease [alpha proteobacterium HTCC2255] gi|114549841|gb|EAU52722.1| Predicted permease [alpha proteobacterium HTCC2255] Length = 407 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 66/357 (18%), Positives = 133/357 (37%), Gaps = 4/357 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y+ + + F C I I + Q L I++V+ + + I+ ++S ++P VL Sbjct: 34 TKLDRYLFKQLIGPFAFFCFIISGILLLNQALGIIDIVTENGQPAYIVFELSFLILPKVL 93 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + + ++ + ELL++ + G S I L KP L IL++ LF+ + + Sbjct: 94 ITAISISGFIASVLIINRLYNEEELLVMMSIGRSFIELSKPFLLFGILIASLLFLVVHNL 153 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P S + + + ++ + F + N L I I + Sbjct: 154 NPYAHSKFIEAQERIKKEYVTQIIKPDQFISYQNKYTFFFGDKGNNGELSEILIEEQITP 213 Query: 182 QTHKIYYAQSGSIDLDRQAI--ILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI- 238 T + A++G + ++ + +L +G + +S S+++F + TI Sbjct: 214 DTTLTHIAKNGQVIANKDSNALLLRNGSTQSYNKVSGTFSLLQFDTLVFDLNQLRKDTIS 273 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + S +L + L S +H R + L ++F L+ ++ Sbjct: 274 SESSLSSLNSTMLKKKISALESFDPRLGRAVSLYHDRNAKVLLAMLFPLLGMLGLLLGGF 333 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 R I I + I + + +NP P YL + I L+I Sbjct: 334 NRFGYLIR-IISCILIMASLDLLRGASKSWVVENPLIWPAQYLSPLLCTFIIALIIW 389 >gi|322514885|ref|ZP_08067902.1| YjgP/YjgQ family membrane protein [Actinobacillus ureae ATCC 25976] gi|322119139|gb|EFX91289.1| YjgP/YjgQ family membrane protein [Actinobacillus ureae ATCC 25976] Length = 360 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 57/358 (15%), Positives = 122/358 (34%), Gaps = 5/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E YI + I L + ++I++ + V + S ++P+ Sbjct: 6 MNILERYIGKTIITMIFAVLLMSSGLVFIIKLAEEFKDVGKGSYDALTATYYSLLMLPSD 65 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ +EL+++ ++G SR + V+ AI L +F + Sbjct: 66 IKEFIPVVALIGGLLGLGNLASRSELVVMQSSGFSRFRIGLAVMKTAIPLIVFTMLVSEW 125 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + + + + F+ D + +I I L + I D Sbjct: 126 GIPQT-EQYARNMRSIAQSGSSMLSTKGGFWAKDGNDFIYIRHIENERKLNNLSIYHFED 184 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + AQ+ + + L + + + S + K + + + L Sbjct: 185 KSLKSVTQAQNAIF--NGKNWTLQNVQTSSIADNSIQQAKEVNKDWQTTITPSKLGIVSL 242 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K ++S L + + + ++ F +++ Q + + L++I Sbjct: 243 KPESLSISGL-SDYVGFLKETGQNSKRFQIAFWRKVYQPISMAVMMLLAISFVFGPLRSS 301 Query: 301 QRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I I F V F + P I L L C+S ++ L+ KK+ Sbjct: 302 AMGTKLFIGIIAGFVFYVSNIVFGNMTLVFSWIPVAIGALIPSLICLSIVWWLLTKKR 359 >gi|300718540|ref|YP_003743343.1| permease [Erwinia billingiae Eb661] gi|299064376|emb|CAX61496.1| putative permease [Erwinia billingiae Eb661] Length = 358 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 42/355 (11%), Positives = 120/355 (33%), Gaps = 2/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + + + +V ++ +I+ + ++ + + +P + + Sbjct: 5 LDRYIGKTIFNTIMATLFMLVSLSGIIKFVDQLRKTGQGEYTALGAGLYTVLSVPKDIEI 64 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L ++ + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 65 FFPMAALLGALLGLGTLAQRSELVVMQASGFTRMQIAASVMKTAIPLVLLTMAIGEFVAP 124 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+ + + + L+ + D+ + + +++ + Sbjct: 125 QGEQMARNYRAQQLVGGSLLSTQNGLWAKDGDNFIFIEQIKDNSELSGISIYSFNKERRL 184 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + YA S ++D++ L + + P S + + L Sbjct: 185 ETVRYAASAKYNVDKKRWDLAEVDQSNLTDPKQVTGSQTLSGEWKTTLTPDKLGVVALDP 244 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S L N ++ Y+ ++ Q L + L+++ Sbjct: 245 DALSISGLYN-YVKYLKQSGQVSSRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVSM 303 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P + L + +++K++ Sbjct: 304 GMRVVTGISFGFIFYVLDQIFGPLSLVYNIPPIMGALLPSGAFFAISVYMLLKRR 358 >gi|169634642|ref|YP_001708378.1| hypothetical protein ABSDF3307 [Acinetobacter baumannii SDF] gi|169797503|ref|YP_001715296.1| hypothetical protein ABAYE3539 [Acinetobacter baumannii AYE] gi|184156573|ref|YP_001844912.1| permease [Acinetobacter baumannii ACICU] gi|213155683|ref|YP_002317728.1| permease YjgP/YjgQ family protein [Acinetobacter baumannii AB0057] gi|239502071|ref|ZP_04661381.1| permease YjgP/YjgQ family protein [Acinetobacter baumannii AB900] gi|260556395|ref|ZP_05828614.1| permease YjgP/YjgQ family protein [Acinetobacter baumannii ATCC 19606] gi|301512956|ref|ZP_07238193.1| permease YjgP/YjgQ family protein [Acinetobacter baumannii AB058] gi|301594832|ref|ZP_07239840.1| permease YjgP/YjgQ family protein [Acinetobacter baumannii AB059] gi|169150430|emb|CAM88327.1| conserved hypothetical protein; putative membrane protein [Acinetobacter baumannii AYE] gi|169153434|emb|CAP02576.1| conserved hypothetical protein; putative membrane protein [Acinetobacter baumannii] gi|183208167|gb|ACC55565.1| predicted permease [Acinetobacter baumannii ACICU] gi|193076099|gb|ABO10703.2| putative membrane protein [Acinetobacter baumannii ATCC 17978] gi|213054843|gb|ACJ39745.1| permease YjgP/YjgQ family protein [Acinetobacter baumannii AB0057] gi|260410450|gb|EEX03749.1| permease YjgP/YjgQ family protein [Acinetobacter baumannii ATCC 19606] Length = 366 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 51/354 (14%), Positives = 120/354 (33%), Gaps = 14/354 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + + L+ + I ++++ + + +IL I GY +P L Sbjct: 2 IIRRYLVKQVVSTSLVVIALLTLIMMGGRLIKYFGVAAQGRLDASILFSIIGYRLPEFLT 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + V + + E+ +++ +G SR L + ++ + ++ + + + Sbjct: 62 LILPLGFFIGLMLVFGRLYVDHEMAVLNGSGVSRHQLARLLIPMTLVYMVCQSVLMLWMT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++L+ + F + F S L+ IF + Sbjct: 122 PWGLREFEKLTTTQAVRTGFDLVRPREFISSGPYTIYAGSLSEDRKNLKDIFFYQRAAKE 181 Query: 183 THKIYYAQSGSIDLDR------QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + L G + P + +F+SY L+ E+ Sbjct: 182 GKPDVMILAKEATRVEVANDTANVVDLVQGRRYEIFPGQPKYTQAEFQSYRLRLENDKDV 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + L N+P RSE RL +I ++S+ ++ Sbjct: 242 KFESGDVEALSTSKLFSKANDPV--------VRSELGWRLFGPFTIIIALMLSVALSEVS 293 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 + ++ P + + I K E + + P+ L +++F Sbjct: 294 PRQGRYYRLIPSIFIFASLIVLMIAIKTRISKGELDIWAYPVALLVYAIAAALF 347 >gi|91213818|ref|YP_543804.1| hypothetical protein UTI89_C4869 [Escherichia coli UTI89] gi|117626606|ref|YP_859929.1| hypothetical protein APECO1_2132 [Escherichia coli APEC O1] gi|237703938|ref|ZP_04534419.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|91075392|gb|ABE10273.1| hypothetical protein UTI89_C4869 [Escherichia coli UTI89] gi|115515730|gb|ABJ03805.1| conserved hypothetical protein [Escherichia coli APEC O1] gi|226901850|gb|EEH88109.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] Length = 361 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 46/355 (12%), Positives = 117/355 (32%), Gaps = 3/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ + ++ + + +P + + Sbjct: 8 LDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQI 67 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 68 FFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAP 127 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+A + ++ L+ + ++ + + + Sbjct: 128 QGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNENRRL 187 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + YA + D + + L+ + +P S ++ + L Sbjct: 188 QSVRYAAAAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVVALDP 247 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S L N + Y+ ++ Q L + L+++ Sbjct: 248 DALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPM 306 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P I L L I L ++ +K Sbjct: 307 GVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGAL-LPSASFFLISLWLLMRK 360 >gi|74316600|ref|YP_314340.1| hypothetical protein Tbd_0582 [Thiobacillus denitrificans ATCC 25259] gi|74056095|gb|AAZ96535.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC 25259] Length = 356 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 44/355 (12%), Positives = 104/355 (29%), Gaps = 4/355 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+ + + L ++ + ++Q + + + + +P Sbjct: 1 MNLLARYLAGQVLAASGFMLLALLVLFAFFDVVQELGNL-RAGYGFGQATIVVLLNVPGH 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + T L + N+E ++ +G S + + + L++ + + Sbjct: 60 LYEILPVAALIGTLFALARLVGNSEYAVMRVSGLSNWRVAAYFGVIGVWLALLVLLLGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P ++ A ++ L+ + + + P+NTL+GI I Sbjct: 120 VAPWSDQAAQRYKLSATRSVVAQQFRSGLWVKDGSTFIN-VREVMPDNTLRGIEIYGFDQ 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 A + + L R S ++ S +++ Sbjct: 179 EGRLDWIRAAEIATWRGDKTWQLQTVVETRFSADGIRAQRSANLAWRSVLTPEILSVLLV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + L + + Y + I LI++ A + R Sbjct: 239 APEKMSARAL-WRYIAHLKANGQKASRYELALWSKFISPFVIPIMMLIAMPFAIQSPRAR 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 I + F + + + P ++ + L L I L I+ Sbjct: 298 GTSVKVFFGILAGLGFHLLSRLFGHLGLLNDWPAFV-VSALPLLIFLGIALAGIR 351 >gi|296114026|ref|YP_003627964.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis RH4] gi|295921720|gb|ADG62071.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis RH4] Length = 396 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 49/368 (13%), Positives = 129/368 (35%), Gaps = 21/368 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + + F+V I ++++ + + ++ +L ++ GY P L Sbjct: 16 ILRRYMTTQVASTTALVLGFLVVILLGGRLIRYFGMAAEGGLNVGVLFRLIGYNFPYFLE 75 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + V + + E+ +++ +G SR + + ++ L ++L + + Sbjct: 76 LILPLSFFIGLMLVFGRLYTDHEMTVMNASGISRGRVARLLMPLVVVLMCIEGWVSMVAK 135 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISK-----------YNPNNTLQ 171 P + + +A F + F D +T + Sbjct: 136 PWGMERATNIWQEQSVAQVFDLIRPQEFISSGDYHLYVGEMGANREFLKDVIIIQMHTAE 195 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAII---LNDGEVHRKSPISKDISIMKFKSYTL 228 I + Q I +A+S + I L G + P S+ S + F+ Y + Sbjct: 196 PSDIQSRQSHQRDSIIFAKSATHVETGNGQIQLDLQQGRRYEVDPTSRQYSQIGFERYRM 255 Query: 229 QTE-SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGL 287 T ++ + + LL+ + + + + +E RL+ ++ Sbjct: 256 TLSVKPPEGTSHIRIEGVSTTELLS--IIQGHSKRDNPQEAYAELGYRLSMPWLILLAI- 312 Query: 288 ISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCIS 347 ++A + ++ + + + ++ I + I + P++YL + Sbjct: 313 --LLATPLSYVRPRQGRWYKLVPAILIYVAGVLVVISLKDTIAK-GKLSPVIYLAALLMM 369 Query: 348 SIFLLMIK 355 + + + Sbjct: 370 MVVAMYLN 377 >gi|256829582|ref|YP_003158310.1| permease YjgP/YjgQ family protein [Desulfomicrobium baculatum DSM 4028] gi|256578758|gb|ACU89894.1| permease YjgP/YjgQ family protein [Desulfomicrobium baculatum DSM 4028] Length = 360 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 54/362 (14%), Positives = 118/362 (32%), Gaps = 12/362 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YILR L+ C + I I + R++ + L+ + Y P + Sbjct: 1 MNLLTRYILRQNLFLLLLVCGIGLGIYVFIDLFDRLDNFLEAGVGLSSVGAYFLYRTPFI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P F + + M R+ ELL ++ S + K V++ A+ L + Sbjct: 61 LAQIFPAVFLIALMVQMGLMLRSRELLALEACSVSPGAVAKSVIWYALALCVAQLFFSEA 120 Query: 121 I-EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + R+ + + + + +L+FR + + S + + Sbjct: 121 LGVSGHRAAERIWNEEVRDRQIEKRQLSDLWFREGNRIVHMGSVTPAAGRGLELTVHVLE 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 D I L G P + ++ L+T+ ++ + Sbjct: 181 DDDAGSIREIIRAQEFTSAPEGWLLSGVTRTL-PATFEVQKAAQMELDLRTDVSSFLIVD 239 Query: 240 LKANDQNLSFL-LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 K ++L L L +E ++ +H +L ++ LI++ Sbjct: 240 PKTRLESLPLLQLGAEIKRLRDSGSNIERLQTAWHMKLAYAGSVLVMALIALAVV----- 294 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF---LFCISSIFLLMIK 355 I + L +F ++G + + P+L + F + +++ Sbjct: 295 SFFGSLFVIIPLGLVATF-CYYGLFVLCASAGEKGLVPPVLAAWAANAFFTAVAGGWLLR 353 Query: 356 KK 357 + Sbjct: 354 GR 355 >gi|117618567|ref|YP_858153.1| putative permease [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559974|gb|ABK36922.1| putative permease [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 368 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 49/350 (14%), Positives = 117/350 (33%), Gaps = 20/350 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R ++ L ++ I Q +Q I + ++ + +P + Sbjct: 2 IVFRYLFRETLKTQLAVLFVLLLIFVSQQFIQIIGDAADGEVPTRLVSTLLLLNLPNMAL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ G S +++ + LA+L + + + Sbjct: 62 LMLPISLFLAILFAHGRLYAESEMTVMHAVGFSHRFVMRSAMVLALLTAAVAAFNTGWVA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV---DSR 179 P+ + Q+ + + S+L+ F LD + + + + I S+ Sbjct: 122 PQAKEREYQVIDEFKADPGISFLQAGRFMELDKGRLVAYIQDLNDKGSKLQKIFVLQRSQ 181 Query: 180 DTQTHKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 D + + A G + +D Q + L DG + ++ I +F Y+L Sbjct: 182 DGKPPSVVVATEGVVTVDSNGLQWLTLKDGSRYEGHFNTRQFQISEFDEYSLVIRQQEME 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 KA + LL +E RL+ L ++ + Sbjct: 242 RSNRKAAAKPTMELL----------GTQDNQLMAELQWRLSLPLSILVLTFL---VVPLA 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-PYYIPILYLFLFC 345 + ++ + + ++ + F S I+ + P ++L Sbjct: 289 RVNPRQGRYAKLLPAILLYLSYFLLLSAARSAIDSGRLPHWPGMFLVPLV 338 >gi|74314741|ref|YP_313160.1| hypothetical protein SSON_4447 [Shigella sonnei Ss046] gi|73858218|gb|AAZ90925.1| conserved hypothetical protein [Shigella sonnei Ss046] Length = 361 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 45/355 (12%), Positives = 116/355 (32%), Gaps = 3/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ + ++ + + +P + + Sbjct: 8 LDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQI 67 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ +G +R+ + V+ AI L + + Sbjct: 68 FFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAS 127 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+A + ++ L+ + ++ + + + Sbjct: 128 QGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNENRRL 187 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + YA + D + + L+ + +P S ++ + L Sbjct: 188 QSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVVALDP 247 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S L N + Y+ ++ Q L + L+++ Sbjct: 248 DALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPM 306 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P I L L I L ++ +K Sbjct: 307 GVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGAL-LPSASFFLISLWLLMRK 360 >gi|219871562|ref|YP_002475937.1| permease [Haemophilus parasuis SH0165] gi|219691766|gb|ACL32989.1| permease, inner membrane protein yjgQ [Haemophilus parasuis SH0165] Length = 355 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 51/357 (14%), Positives = 112/357 (31%), Gaps = 4/357 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E YI R I S +++ +V + +I+ ++ V + + +P Sbjct: 1 MNVLERYIGRTILASIMLTLFMLVGLGAIIKFVEEFRSVGRGSYDGLHAAYYTLLTMPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + L + +EL+++ + G SR + V+ AI L + I Sbjct: 61 IETFFPIAALLGSLMGLGGLASRSELVVMQSAGFSRFRIGLAVMKTAIPLMVITMIMGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + + + F+ D + +I I + L I I + Sbjct: 121 GVPQT-EQYARNMRSIAQSGGSMLATQGGFWAKDGNDFIYIRQIQDERNLNNILIYQFEN 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 I A+ + Q +L + + +++ + + L Sbjct: 180 QVLKSIKQAEKATY--SEQGWLLQQVDKSEIHESGITQTRETDQAWKTSITPSKLGIVSL 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K ++S L + + + + F +++ Q + + L++I Sbjct: 238 KPESLSISGLAD-YVGFLKDTGQDSKRFEITFWRKVFQPISMAVMMLLAISFIFGPLRSS 296 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I I F V + I + S+ ++ KK Sbjct: 297 TMGAKIVIGILAGFVFYVANIVFGNLSLIVSWLPVPIGALIPSLLCLSVVWWLLNKK 353 >gi|62182906|ref|YP_219323.1| putative permease [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62130539|gb|AAX68242.1| putative permease [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322717409|gb|EFZ08980.1| putative permease [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 360 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 46/354 (12%), Positives = 114/354 (32%), Gaps = 2/354 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ + ++ + +P + + Sbjct: 7 LDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGNYDALGAGMYTLLSVPKDIQI 66 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 67 FFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAISLVLLTMAIGEWVAP 126 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+A + ++ L+ + ++ V + + Sbjct: 127 QGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELAGISIYVFNDQRRL 186 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + YA S D + + L+ + +P S ++ + L Sbjct: 187 QSVRYAASAKFDPEHKVWRLSQVDESDLQNPKQITGSQTVSGTWKTNLTPDKLGVVALDP 246 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S L N + Y+ ++ Q L + L+++ Sbjct: 247 DALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPM 305 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 IS F V + + P + L LM++K Sbjct: 306 GVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIVGALLPSASFFLISLWLMLRK 359 >gi|54295469|ref|YP_127884.1| hypothetical protein lpl2555 [Legionella pneumophila str. Lens] gi|53755301|emb|CAH16795.1| hypothetical protein lpl2555 [Legionella pneumophila str. Lens] Length = 359 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 45/369 (12%), Positives = 120/369 (32%), Gaps = 22/369 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + + + +V I Q +Q +N +S + +++K+ +P ++ Sbjct: 2 IIFRYLTKEVFLTLIALTAILVLIFMSNQFIQYLNRAASGSIPGFVIMKLLMLELPNLMG 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + + +E+ ++ G L+K +A ++ + + I Sbjct: 62 LLLPLGFYIALLLAYGRLYAESEMTVLRACGYGPRQLLKHSFAMATVVLVVVAIVVIWAS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +L + + F ++ I + + Q I ++ + Sbjct: 122 PVIAVERTKLIRSTGIKTLIQTIMPGRFHAINSGQQIFYVQSMNRDHSQAEQIFMAKHSV 181 Query: 183 THKIYY---------AQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 + + I+L +G+ ++ P D I +F SY + + Sbjct: 182 QDNKLLWDVLWADKAFAEVNPQTGEEYIVLQNGKEYQGVPGHADYQIAEFASYKSKLPNP 241 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + A L N ++ +E R++ L + L+++ Sbjct: 242 TV-VMHDDARTAKTRDLWPLNNHDLKKA--------AELQWRISIPLMVLTLTLVAVPL- 291 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-PYYIPILYLFLFCISSIFLL 352 + + K + ++ I I + ++ ++ + +L Sbjct: 292 --SRVSPRSGKYSKLLPAIIIYIFYANFMFVSRDAIATGKIPWWIGMWWVHVAVAILGIL 349 Query: 353 MIKKKYTKI 361 I + K+ Sbjct: 350 FIWRNQVKL 358 >gi|254507394|ref|ZP_05119529.1| permease YjgP/YjgQ [Vibrio parahaemolyticus 16] gi|219549650|gb|EED26640.1| permease YjgP/YjgQ [Vibrio parahaemolyticus 16] Length = 356 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 44/356 (12%), Positives = 120/356 (33%), Gaps = 4/356 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +LYI R I + M ++ ++ +I+ ++++ V + L IP + Sbjct: 3 KILDLYIGRTIIATTSMVLATLIGLSSIIRFVEQLRSVGKGSYDLLNAFYFVLLGIPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + + L + ++EL+++ +G S++ + VL AI L + + + Sbjct: 63 ELFFAMSALLGALIGLGILASSSELVVMQASGYSKLDIGLSVLKTAIPLMLIIMLLGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + + ++ + D D +I I K + + Sbjct: 123 APQAQ-KMARELRSFSISGGQIVSVRAGVWARDVDDFIFIGKVEDDTLYGVKVWRFDDEK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + +++ +A D Q ++ N + S +K ++ + + ++ Sbjct: 182 KLYQVMFAPEADYLGDNQWLMKNAEITDMADKVELAKSKVKEYAWKTTLVPDKLAVVKVE 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + +S L + + Y +++TQ + + L+++ R Sbjct: 242 PEELAMSGLYD-YVTYLKASEQDASRYELALWRKVTQPISIAVMMLLALSFVFGPL--RS 298 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + F + + + + + LM+ ++ Sbjct: 299 VSMGARVLSGVVAGFTFYISSEFFGPLTLVYGIPPAVGAVMPSLVFLTLALMLLRR 354 >gi|53803847|ref|YP_114531.1| hypothetical protein MCA2101 [Methylococcus capsulatus str. Bath] gi|53757608|gb|AAU91899.1| putative membrane protein [Methylococcus capsulatus str. Bath] Length = 356 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 49/357 (13%), Positives = 112/357 (31%), Gaps = 3/357 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + + L ++ + + + L + P Sbjct: 1 MNTLNRYIGWEVIKGAAFAALVLLALLNFFTFADELRDLGEGNYGLGSIFLYLTLTSPHS 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + VL +M N EL+ + G SR ++ VL I++S+ + Sbjct: 61 LYELIPSGALIGGLVVLGNMANNHELVAMQAAGVSRGRIVWAVLRAGIVISLISVVISEY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + L A A S + ++ R ++Y+ + + L I I + Sbjct: 121 VIPPAERAAQMLKATATRQQVASQTKYGVWIRDG-NVYVNVREIENQERLGDIHIFEISP 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSP-ISKDISIMKFKSYTLQTESANSSTIV 239 + DR L D + R P + I+ K + S + + Sbjct: 180 DGRP-ALAMHAARASFDRGIWKLEDIGLTRFDPAGNAAIAEHKEQEDWSSVLSPDMLDVF 238 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + + + L + F R+ L + L++I Sbjct: 239 IVRPENLSAQDLAKYMAYQTENAQKSLAVEQAFWGRMVNPLITLAMLLLAIPFVFNARRD 298 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + I +++ + F + + + + + ++ L + + ++ Sbjct: 299 VSSGQRIVIGVTIGLGFYLTNRMVSHLGLVYEVNAPLTMVTPPLVVLFAALAAFRRR 355 >gi|30248806|ref|NP_840876.1| hypothetical protein NE0802 [Nitrosomonas europaea ATCC 19718] gi|30180401|emb|CAD84713.1| putative membrane protein [Nitrosomonas europaea ATCC 19718] Length = 355 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 44/355 (12%), Positives = 108/355 (30%), Gaps = 2/355 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YI + +++ ++ + +L +++ V T + + L+P Sbjct: 1 MKICHRYIAWQVLTGMVIATAILLPLFSFFDLLDQLDDVGKGTYTTWDAFLYTVMLMPRR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + PF + T L ++ N EL+ + G S + + + + LL E Sbjct: 61 FIQIAPFIALLGTVGALGALAVNLELVAMRVAGLSPLMIGLAPVGIGGLLIASTIALEYF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ + L A A ++ R + ++ + I + Sbjct: 121 VAPQFQQQATILRAVALEQGAELGKGLGIWTRNERNILRIGEMLHKGRATDIEVIHFDGE 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 +A I D L+D + SP + + +T+ Sbjct: 181 GSMTAHVHAWYADIF-DESLWKLHDVTIRTFSPDRITSRKAHILQWHSFLGPDDIATLTK 239 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 L+ + + + Y +++ + + L++I Sbjct: 240 SPESLTPIELV-KHAEFLRATGQKADAYVMALWRKVGGAIMTIAMILVAIPFIFGSVREG 298 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 K+ + + + I + NP + ++ + + L+ + Sbjct: 299 LGGKLILAALMGISIYLFDQIIANIGLVFQLNPIVVSVVPGMVLIAVAAHWLLRR 353 >gi|229513427|ref|ZP_04402891.1| hypothetical protein VCB_001072 [Vibrio cholerae TMA 21] gi|229349304|gb|EEO14260.1| hypothetical protein VCB_001072 [Vibrio cholerae TMA 21] Length = 366 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 52/347 (14%), Positives = 114/347 (32%), Gaps = 19/347 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + ++ + S +++L I G +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASDGEIPTSMILSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LA++ + + + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + L + + L++ F R D + N L +F+ Sbjct: 122 PWSQDKEAHLMDQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLYNVFVAQLAPRD 181 Query: 183 THK-----IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + + RQ I L DG + P D I F SY + Sbjct: 182 SILPSVMFSHSGDVKELSDGRQIITLYDGTRYEGVPTRVDYMITNFDSYDGLIGQREVKS 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 LLN ++E R++ V L++++ A Sbjct: 242 AERDWEALPTLSLLN----------NADRRAQAELQWRISL---VVCIPLLTMLVVPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 + ++ + + ++ I F S I ++ I+ L+ Sbjct: 289 VNPRQGRFAKMGPAILIYLTYFLALSATKSAI-EDGSLPVIIGLWPI 334 >gi|229588597|ref|YP_002870716.1| putative ABC transporter membrane protein [Pseudomonas fluorescens SBW25] gi|229360463|emb|CAY47320.1| putative ABC transport system, membrane protein [Pseudomonas fluorescens SBW25] Length = 372 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 49/365 (13%), Positives = 115/365 (31%), Gaps = 28/365 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + + ++ I + ++ + +S L I G+ +P L Sbjct: 2 IVFRYLSREVLLTLSAVSAVLLVIIMSGRFVKYLAQAASGALDPGSLFLIMGFRLPGFLQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ TG S+ L+ + A +++ + + Sbjct: 62 LILPLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLLGMTMIPAAGVALIVAWLSLSLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFF--RLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + + K F LE F + + + L G+FI + R Sbjct: 122 PQGAMQFQLVLNKQDAMTEFDTLEPGRFQALNDGSRVTYTETLTDDRANLGGVFISEKRL 181 Query: 181 TQTHKIY--------YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 Q K + + +IL +G + SP D +K+ +Y + Sbjct: 182 GQDKKDRGISVLVADSGRQEVRPDGSRYLILENGYRYDGSPGMADYRAIKYDTYGVMLAR 241 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + S V + L ++ RL+ L I L+++ Sbjct: 242 PDISDEVTDRDAIPTMDLF----------GSNELRSIAQLQWRLSLPLLVFIVTLMAVPL 291 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-----NPYYIPILYLFLFCIS 347 A + ++ + + ++ + +E+ + +FL Sbjct: 292 A---RVNPRQGRFLKLLPAILLYMAYLTMLISAHGAVEKGKLSPTLGLWWVHGIFLAIGL 348 Query: 348 SIFLL 352 + Sbjct: 349 GLLYW 353 >gi|254507443|ref|ZP_05119578.1| putative permease, YjgP/YjgQ family [Vibrio parahaemolyticus 16] gi|219549699|gb|EED26689.1| putative permease, YjgP/YjgQ family [Vibrio parahaemolyticus 16] Length = 366 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 48/353 (13%), Positives = 122/353 (34%), Gaps = 19/353 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ + ++ + + ++L I G IP + Sbjct: 2 IIVRYLIRETLKSQLAIFFVLLLVFVSQTFIKVLGDATDGDIPARLILAIVGLNIPQMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ + LA + ++ + + Sbjct: 62 LMLPMSLYIGILLTFGRLYSESEITVMNATGMGSKFLIRAAMSLAFITTVLAAFNTLYLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + QL + + L+ F R D + +N L +F+ R Sbjct: 122 PWSQEKEAQLIEQVAAENSVDLLKAGQFQRTPDGSSVVFIDEIRDNKLNNVFVAQVRPRD 181 Query: 183 --THKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + ++ SG + Q I+++DG + P D + +F+ Y+ Sbjct: 182 AILPSVMFSNSGEVREHDDGRQMIVMHDGTRYEGIPTRLDYMVTEFEHYSGLIGQREVQA 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 L+ + ++E R++ V L++++ A Sbjct: 242 KRRSWGAVPTLDLIESTDLSA----------KAELQWRISL---FVCIPLLTMLVVPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 + ++ + + ++ F F S I ++ ++ ++ + + Sbjct: 289 VNPRQGRFAKMGPAILAYFVYFISMSTTKSAI-EDGNIPAVIGMWPINFALLV 340 >gi|16763280|ref|NP_458897.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29144759|ref|NP_808101.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213162831|ref|ZP_03348541.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213427634|ref|ZP_03360384.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213618568|ref|ZP_03372394.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213650367|ref|ZP_03380420.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|289824527|ref|ZP_06544086.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25513067|pir||AG1061 probable inner membrane protein STY4818 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16505588|emb|CAD06940.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29140398|gb|AAO71961.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 360 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 45/354 (12%), Positives = 113/354 (31%), Gaps = 2/354 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ + ++ + +P + + Sbjct: 7 LDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGNYDALGAGMYTLLSVPKDIQI 66 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 67 FFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAP 126 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+A + ++ L+ + ++ + + Sbjct: 127 QGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELAGISIYAFNDQRRL 186 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + YA S D + + L+ + +P S ++ + L Sbjct: 187 QSVRYAASAKFDPEHKVWRLSQVDESDLQNPKQITGSQTVSGTWKTNLTPDKLGVVALDP 246 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S L N + Y+ ++ Q L + L+++ Sbjct: 247 DALSISGLHN-YVKYLKSSGQDAGRYQFNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPM 305 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 IS F V + + P + L LM++K Sbjct: 306 GVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIVGALLPSASFFLISLWLMLRK 359 >gi|332086995|gb|EGI92129.1| hypothetical protein SB359474_4824 [Shigella boydii 3594-74] Length = 360 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 46/355 (12%), Positives = 115/355 (32%), Gaps = 3/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ + ++ + + +P + Sbjct: 7 LDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQT 66 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 67 FFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAP 126 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + A+A + ++ L+ + ++ + + + Sbjct: 127 LGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNENRRL 186 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + YA + D + + L+ + +P S ++ + L Sbjct: 187 QSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVVALDP 246 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S L N + Y+ ++ Q L + L+++ Sbjct: 247 DALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPM 305 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P I L L I L ++ +K Sbjct: 306 GVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGAL-LPSASFFLISLWLLMRK 359 >gi|268592782|ref|ZP_06127003.1| membrane protein, YjgP/YjgQ family [Providencia rettgeri DSM 1131] gi|291311563|gb|EFE52016.1| membrane protein, YjgP/YjgQ family [Providencia rettgeri DSM 1131] Length = 358 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 49/355 (13%), Positives = 116/355 (32%), Gaps = 2/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI R I S L++ +V +A +I+ ++++ V + + +P + + Sbjct: 5 LDRYIGRTILNSILVTLFLLVSLAGIIKFVEQLRKVGDGDYTALSAGVFTLLTVPKDIDI 64 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L ++ +EL+++ +G +R+ + V+ A+ L I I P Sbjct: 65 FFPMAALLGALMGLGALASRSELVVMQASGFTRLQIALSVMKTAVPLVIVAMFIGEWIAP 124 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + A+ + + +E ++ + +D N + + Sbjct: 125 AGEQWARNYRAEKIVGNSLVVTDEGMWAKDANDFIHIQRINNATSIQDVSIYRFDDQRKL 184 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK-SYTLQTESANSSTIVLKA 242 + +A +G D Q +L+ + S K + + + L A Sbjct: 185 KSVMFAANGEYDSTNQLWVLSQVDESILSSEKKITGSQRLTVDWKTNLTPEKLGIVSLNA 244 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++ L + ++ Y K++ L + L+++ Sbjct: 245 DSLSIRGLYQ-YVSYLKESGQVAAVYELSMWKKILAPLSAAVMMLMAVSFIFGPLRTVPM 303 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I F V + P I + + L++K+K Sbjct: 304 GVRVISGIVGGFLFYVLNQGFGNWSLVYSVPPIIAAALPSVLFLIVSITLLVKRK 358 >gi|15642496|ref|NP_232129.1| hypothetical protein VC2500 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|153215710|ref|ZP_01950091.1| membrane protein, putative [Vibrio cholerae 1587] gi|153822404|ref|ZP_01975071.1| membrane protein, putative [Vibrio cholerae B33] gi|153831206|ref|ZP_01983873.1| putative membrane protein [Vibrio cholerae 623-39] gi|227082619|ref|YP_002811170.1| hypothetical protein VCM66_2422 [Vibrio cholerae M66-2] gi|229507442|ref|ZP_04396947.1| hypothetical protein VCF_002671 [Vibrio cholerae BX 330286] gi|229509633|ref|ZP_04399114.1| hypothetical protein VCE_001033 [Vibrio cholerae B33] gi|229516758|ref|ZP_04406204.1| hypothetical protein VCC_000775 [Vibrio cholerae RC9] gi|229521565|ref|ZP_04410983.1| hypothetical protein VIF_002101 [Vibrio cholerae TM 11079-80] gi|229606948|ref|YP_002877596.1| hypothetical protein VCD_001857 [Vibrio cholerae MJ-1236] gi|254291418|ref|ZP_04962210.1| membrane protein, putative [Vibrio cholerae AM-19226] gi|254851045|ref|ZP_05240395.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255744521|ref|ZP_05418473.1| putative membrane protein [Vibrio cholera CIRS 101] gi|297581347|ref|ZP_06943270.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|298500669|ref|ZP_07010473.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|9657081|gb|AAF95642.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|124114628|gb|EAY33448.1| membrane protein, putative [Vibrio cholerae 1587] gi|126520047|gb|EAZ77270.1| membrane protein, putative [Vibrio cholerae B33] gi|148873313|gb|EDL71448.1| putative membrane protein [Vibrio cholerae 623-39] gi|150422608|gb|EDN14563.1| membrane protein, putative [Vibrio cholerae AM-19226] gi|227010507|gb|ACP06719.1| putative membrane protein [Vibrio cholerae M66-2] gi|229341159|gb|EEO06163.1| hypothetical protein VIF_002101 [Vibrio cholerae TM 11079-80] gi|229345821|gb|EEO10793.1| hypothetical protein VCC_000775 [Vibrio cholerae RC9] gi|229353107|gb|EEO18046.1| hypothetical protein VCE_001033 [Vibrio cholerae B33] gi|229354947|gb|EEO19868.1| hypothetical protein VCF_002671 [Vibrio cholerae BX 330286] gi|229369603|gb|ACQ60026.1| hypothetical protein VCD_001857 [Vibrio cholerae MJ-1236] gi|254846750|gb|EET25164.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255738046|gb|EET93439.1| putative membrane protein [Vibrio cholera CIRS 101] gi|297534185|gb|EFH73023.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|297540838|gb|EFH76895.1| conserved hypothetical protein [Vibrio cholerae MAK 757] Length = 366 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 52/347 (14%), Positives = 114/347 (32%), Gaps = 19/347 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + ++ + S +++L I G +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASDGEIPTSMILSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LA++ + + + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + L + + L++ F R D + N L +F+ Sbjct: 122 PWSQDKEAHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLYNVFVAQLAPRD 181 Query: 183 THK-----IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + + RQ I L DG + P D I F SY + Sbjct: 182 SILPSVMFSHSGDVKELSDGRQIITLYDGTRYEGVPTRVDYMITNFDSYDGLIGQREVKS 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 LLN ++E R++ V L++++ A Sbjct: 242 AERDWEALPTLSLLN----------NADRRAQAELQWRISL---VVCIPLLTMLVVPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 + ++ + + ++ I F S I ++ I+ L+ Sbjct: 289 VNPRQGRFAKMGPAILIYLTYFLALSATKSAI-EDGSLPVIIGLWPI 334 >gi|89075942|ref|ZP_01162317.1| putative permease [Photobacterium sp. SKA34] gi|89048383|gb|EAR53961.1| putative permease [Photobacterium sp. SKA34] Length = 338 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 42/335 (12%), Positives = 112/335 (33%), Gaps = 1/335 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I +F ++ +V ++ +I+ ++++ V + L L +P + Sbjct: 3 KILDWYIGRTIIATFSLTLSTLVGLSAIIKYVEQLRKVGQGSYDLLKALYFVLLSMPQDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++ + L A+ + I + + Sbjct: 63 IMFFPMAVLLGALIGLGMLASSSELVVMQAAGFSKLDIGLSTLKTAVPMMIVVVLLGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + ++ + + + ++ + D+ ++ N Sbjct: 123 APQAQKMAREYRSAWIYGGSVIAAQSGVWAKNDNSFIYMGRVHDLNKVDVVNIWQFDNKG 182 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 Q + A+ S D + + S + K + + + +K Sbjct: 183 QLEDVTSAKRASYDKATGWTMHDVTITDMIGSSQLTNSQIASKHWETTLTPDKLAVVTVK 242 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + +LS L + N + Y F ++ Q + + L+++ Sbjct: 243 PEELSLSGLYH-YVNYLKETKQDASRYDLAFWRKALQPISIAVMMLLALSFVFGPLRSVT 301 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 + +F + + + + P + Sbjct: 302 MGARVLSGVIFGFAFYISDQVFGPMILVYRLPPIL 336 >gi|85060085|ref|YP_455787.1| putative transport protein [Sodalis glossinidius str. 'morsitans'] gi|84780605|dbj|BAE75382.1| putative transport protein [Sodalis glossinidius str. 'morsitans'] Length = 356 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 46/352 (13%), Positives = 113/352 (32%), Gaps = 2/352 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ ++++ V S + IP + + Sbjct: 5 LDRYIGKTIFNTIMMTLFMLVSLSGIIKFVEQLRKVGQGGYSALGAGLFTLLSIPKDIEI 64 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L S+ +EL+++ +G SR+ + V+ AI L + + P Sbjct: 65 FFPMSALLGALLGLGSLATRSELVVMQASGFSRMQVAGSVMKTAIPLVLLTMAIGEWVAP 124 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + +N + D + +I I + ++ L G+ I Sbjct: 125 AG-EQMAYNYRTQMIYGGSMLSTQNGLWAKDGNDFIFIERVVGSDELAGVNIYHFDKADR 183 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 + + + + + E + + + L+ N Sbjct: 184 LQSLRYAATATFSNGSWKLSQVDESDLTNDKQITGRQTLNGEWKTNLTPDKLGVVALEPN 243 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 ++S L N N + Y+ ++ + L+++ Sbjct: 244 SLSISGLYN-YVNYLKQSGQESNRYQLNMWSKIFSPFSVAVMMLMALSFIFGPLRSVPMG 302 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 I IS F V + + P L + + +++++ Sbjct: 303 VRVVIGISFGFLFYVLDQIFGPLSLVYNMPPVFGALLPSMAFLIISIVMLLR 354 >gi|90408708|ref|ZP_01216857.1| putative permease [Psychromonas sp. CNPT3] gi|90310190|gb|EAS38326.1| putative permease [Psychromonas sp. CNPT3] Length = 365 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 47/359 (13%), Positives = 125/359 (34%), Gaps = 18/359 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++ +S ++ I + + + + + +++L + +PT+ Sbjct: 2 ILRRYLMLETFKSQFGILFVLLLIFVSQKFIAILEQAINGVIAPDLVLTLLYLNLPTLGT 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + ++ +E++ + + G S +++K L L+ F + + Sbjct: 62 LMLPISFYLAILFAHGRLHSESEMVAMTSCGYSPNSVLKATLLLSFFTFAFASFNSLYLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI---VDSR 179 P + + + KA+ + L E F + ++ + + S Sbjct: 122 PSAENEMIAVIEKAESDAGVATLIEGRFHKSSENGGVVYVEKYHEGQKLERIFASYWPSD 181 Query: 180 DTQTHKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + + A GS+ D + L DG+ + + + +F SY + + + Sbjct: 182 ENKAPSVITALHGSVQEKEDGTWLTLEDGQSYTGNVGEHEFDSSRFSSYEVHIANREIRS 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + S LL + + R+E R+ L ++ +++ A Sbjct: 242 RSRGVSALPTSILLT----------QTDDKSRAELQWRMAIPLSILLLTFMAVPLA---K 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + ++ + + +L++ F S IE+ I ++ + + K Sbjct: 289 VNPRQGRYAKLMPALALYLTYFLLLSTSKSLIEEGTLPILSIWGVQIVFLLGGVFLHLK 347 >gi|257058053|ref|YP_003135941.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 8802] gi|256588219|gb|ACU99105.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 8802] Length = 395 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 52/374 (13%), Positives = 132/374 (35%), Gaps = 22/374 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRI-NLVSSSTESLNILLKISGYLIPT 59 + + YI + F+ + + I L + N V S L L+I +P Sbjct: 22 LSLMDRYIGGQLITPFIFGVGLVSSLGVAIGYLSDLGNKVVDSNLPLIKALEILLLKVPE 81 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 P + T ++ ++EL+ + G S LI P L L++++S F+ Sbjct: 82 FTAYALPISVMLTTLLTYGRLSSDSELIALRACGVSLSRLIAPALALSLVVSGITFVFNE 141 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL------------YIKISKYNPN 167 ++ P + K + ++++F+ +++ ++ ++ Sbjct: 142 LVVPTANYQATSILVKYLNEEHRFWQQKDIFYPDYEEISLPNGETIKRLKHLFYAEEFDG 201 Query: 168 NTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 ++ + I++ +KI + S + + ++ +G +++ +P + FK Sbjct: 202 ENMKALTILEWIGDSLNKIVISDSATWNANQNTWDFFNGNIYKIAPDASYKDTFGFKHRQ 261 Query: 228 LQTESANSSTIVL--KANDQNLSFLLNPNPNNPNYR-PELLETYRSEFHKRLTQWLFPVI 284 L A + + N+ + L T++ ++++ V+ Sbjct: 262 LPLSKAPFEFALQGRNPYEMNIIQAQEYTKLLKMIGDQKNLRTFQVRIQQKMSFPFICVV 321 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL- 343 FGLI V + + + I ++ ++I + P + +L Sbjct: 322 FGLIGSVLGARPQQMSRSTSFGLS----VIIIFTYYVLGFLIGSLGLVGAISPFMAAWLP 377 Query: 344 -FCISSIFLLMIKK 356 F ++ ++ + Sbjct: 378 NFIGLAVGGWLLYR 391 >gi|166364704|ref|YP_001656977.1| permease [Microcystis aeruginosa NIES-843] gi|166087077|dbj|BAG01785.1| permease [Microcystis aeruginosa NIES-843] Length = 387 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 35/364 (9%), Positives = 120/364 (32%), Gaps = 21/364 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y++ + FL S + + + N V + L L+I +P + Sbjct: 16 LIDRYLISQLLPPFLFSVGLFASLGVAIGNLSDLANQVVDANLPLASALEILLLKVPEFV 75 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + T ++ ++E + + + G + L P L++++++ F+ + Sbjct: 76 TYSLPVSLLLATLITYGRLSSDSETVALQSCGVTLYRLFIPTFCLSLIVTVVTFLLNEYV 135 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI------------KISKYNPNNT 169 P ++ + + ++ ++ + + ++ Sbjct: 136 VPNANYRATEILVQKINKEASFWKNKDFYYPDYEIKTLENGTINRNLISLFYAEQFDGEK 195 Query: 170 LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISI---MKFKSY 226 ++ + ++ + ++I A S + +G ++ +P + K + Sbjct: 196 MKTVTVIRWLKQELNQIIIADSARWNAVDNVWDFFNGIIYELTPPNASYRQVIPFKAEKI 255 Query: 227 TLQTESANSSTIVLKANDQNLSFLLNP-NPNNPNYRPELLETYRSEFHKRLTQWLFPVIF 285 L + + + + N+ + + + + ++ +++ ++F Sbjct: 256 ALSRSAFDFARQSRDPYEMNIPQAIEYVQLLKLSGDDKRVRFFQVRIQQKIAFPFVCIVF 315 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC 345 I + + +S++I F +++ ++++ + P L +L Sbjct: 316 ATIGCALGSLPQRISRG---TSFGLSVAIVF-LYYLLNFLVGSLGLTATLSPFLAAWLPN 371 Query: 346 ISSI 349 Sbjct: 372 FFGF 375 >gi|156975868|ref|YP_001446775.1| hypothetical protein VIBHAR_03634 [Vibrio harveyi ATCC BAA-1116] gi|156527462|gb|ABU72548.1| hypothetical protein VIBHAR_03634 [Vibrio harveyi ATCC BAA-1116] Length = 366 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 44/357 (12%), Positives = 120/357 (33%), Gaps = 19/357 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + + + S ++ + G +P + Sbjct: 2 IIVRYLIRETLKSQFAIFFVLFLVFLSQKFISVLAKASDGDIPAGLIFSVVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+++++ TG L++ L LAI+ S + + Sbjct: 62 LMLPLSLYIGILITFGRLYAESEIVVMNATGIGNKFLVQAALCLAIITSGVAAFNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + ++QL + + + L++ F D + ++TL +F+ R Sbjct: 122 PWSQDRVEQLYDQVEAENSVDLLQKGQFQGTPDGSSVVFIDDIKDSTLSNVFVAQMRPRD 181 Query: 183 THK-----IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + + RQ I +++G + P + + KF Y Sbjct: 182 SILPSVMFSSSGEVKELADGRQIITMHEGTRYEGVPTRVEYMVTKFDQYEGVIGQREVKQ 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 L+ ++E R++ V L++++ A Sbjct: 242 KGRDWEAYPTLDLI----------GHPDPEAQAELQWRISL---FVCIPLLTMLVIPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + ++ + + ++ I F S +E+ + + ++ + + ++ Sbjct: 289 VNPRQGRFAKMGPAILIYLAYFLAISATKSALEE-GTFPAAIGMWPINAMLLIVAIL 344 >gi|332879242|ref|ZP_08446939.1| permease, YjgP/YjgQ family [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332682662|gb|EGJ55562.1| permease, YjgP/YjgQ family [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 368 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 50/364 (13%), Positives = 118/364 (32%), Gaps = 9/364 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPTV 60 ++Y+++ ++ S I+ IA V + I+ +++ I+ + +P Sbjct: 9 SKLDMYLIKKFLGTYFFSIALIISIAVVFDFNENIDKFTTNHAPWKGIIFEYYANFVPYF 68 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +P + + + N+E++ + G S L++P + A ++++ F+ Sbjct: 69 SNLFSPLFVFISVIFFTSKLAENSEIIAMMAAGMSFKRLMRPYMISAAIIAVMTFLLGAY 128 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + PK T + + + + T + + Sbjct: 129 VIPKGSVTRLNFENIYKKKKKTEFAQNVQLQVDTGVIAFIEHFDGRTKTGYHFSLDKFVN 188 Query: 181 TQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A S S D +R +N+ + + + IS + E ++ Sbjct: 189 KKLVSHLTAASVSYDTLSDERYHWRINNYTLRELKGMREYISHGSRIDSIIAMEPSDFLL 248 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L ++ + E+ KR I +I + A Sbjct: 249 TRNQQETLTSPELKEYIVKQRARGSGNVKPFEVEYQKRFATPFASFILTIIGLSL---SA 305 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF-CISSIFLLMIKK 356 R+ + I L++S + F + N + P L +L I + + K Sbjct: 306 RKRKGGMGLYLGIGLALS-ASYILFQTVSSTFAINADWPPALAAWLPNIIFAFIAFFLYK 364 Query: 357 KYTK 360 K + Sbjct: 365 KAPQ 368 >gi|261492351|ref|ZP_05988913.1| putative inner membrane protein [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496137|ref|ZP_05992545.1| putative inner membrane protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261308239|gb|EEY09534.1| putative inner membrane protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312034|gb|EEY13175.1| putative inner membrane protein [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 365 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 44/360 (12%), Positives = 118/360 (32%), Gaps = 6/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E YI + I + ++ ++ + +I+ ++ V + + IP Sbjct: 6 MNILERYIGKTILSAIFLTLFMLIGLGAIIKFVEEFRDVGRGSYDGLKAAYYTFLTIPRD 65 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + L ++ +EL+++ +G SR + V+ A+ L +F I Sbjct: 66 IETFFPIAALLGSLLGLGNLASRSELVVMQASGFSRFRIGLAVMKTALPLVLFTMIIGEW 125 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI--KISKYNPNNTLQGIFIVDS 178 P+ + + + AQ + ++ + + + I + + + Sbjct: 126 GVPQTEQFARNMRSIAQSGGSMLATKDGFWAKDGNSFIYINHIKNEKSLDNVLIYQFGEG 185 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 ++ + + + D + +L+ E + + + + + Sbjct: 186 QNKRELQSVLKAGTANYSDEKGWVLSKVEKSTVGENQIQQAKQPDQVWQTSLTPSKLGIV 245 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 LK ++S L + + + + F +++ Q + + L++I Sbjct: 246 SLKPESLSISGLAD-YVGFLKDTGQDPKRFEITFWRKVFQPISMAVMMLLAISFIFGPL- 303 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI-PILYLFLFCISSIFLLMIKKK 357 R I I + F + + + P+ L + I + + K Sbjct: 304 -RSSTMGAKIVIGIVAGFMFYVANIVFGNLSLIATWLPVPVGALIPSLLCLIIVWWLLSK 362 >gi|312884632|ref|ZP_07744335.1| hypothetical protein VIBC2010_15702 [Vibrio caribbenthicus ATCC BAA-2122] gi|309367724|gb|EFP95273.1| hypothetical protein VIBC2010_15702 [Vibrio caribbenthicus ATCC BAA-2122] Length = 356 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 45/357 (12%), Positives = 123/357 (34%), Gaps = 3/357 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +LYI + + + + V ++ +I+ ++++ V T L L IP + Sbjct: 3 KILDLYIGKTLIATTSLVLATFVGLSAIIKYVEQVRKVGEGTYDLIQALFFVILSIPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++ + VL A+ L + + + Sbjct: 63 EMFFPMAALLGALIGLGMLASSSELVVMQAAGFSKLNIGMSVLKTAVPLMVLVTLLGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + + + + D + +I I+K + + + Sbjct: 123 APQAQ-KMARDLRTFATSGGALMSVRTGVWARDANDFIFINKVDDDKIYGLNMWRFNDQK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 Q + +A+ + ++ + + + + +K + + + +K Sbjct: 182 QLSQTLFAKEVDYVSENIWVMKDAEVTDMEGEVKLEKHFLKEYEWKTSLAPDKLAVVTVK 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + +L L + + Y F +++TQ L + L+++ Sbjct: 242 PEELSLGGLY-EYVSYLKSSEQDPSRYELAFWRKVTQPLSIGVMMLMALSFIFGPLRSVT 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + +F + F + + P + + I + ++++K Sbjct: 301 MSARILSGVIAGFTFYISSEFFGPLSLVYNIPPIFGAI-MPSCVFLLIAIFLLQRKL 356 >gi|117619151|ref|YP_858152.1| putative permease [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117560558|gb|ABK37506.1| putative permease [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 356 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 48/355 (13%), Positives = 114/355 (32%), Gaps = 2/355 (0%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + YI R I S L+ L +V +A +I+ ++++ V + L +P Sbjct: 4 ILDRYIGRVIFMSVLLCELTLVGLAALIKYVEQLKSVGEGNYDMLSALYYVLLSMPKEAV 63 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + L + ++EL+++ G S+I+++ L AI L I + + + Sbjct: 64 LFFPLAALLGGLIGLGQLATSSELVVMQAAGRSKISIVMAALKTAIPLMILVGLMGEYVA 123 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + L+ + + D + ++ I+ + L GI + + Sbjct: 124 PIA-KRMADDIKAGALSEGRLTVSAYGVWARDGNNFVNINGVRNDGALTGITLYRFTPER 182 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + ++ P ++ + + + Sbjct: 183 KLIDILQAQEGVFEQHHWLLKQVQVTRFDDPRQIMSETQPQMEWSSELTPKQLGVVSIDP 242 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++ LL+ + + Y+ E ++L L V L++ Sbjct: 243 ENLPVAGLLD-YIGYLDANKQDAGRYKLEMWRKLLSPLSVVAMILLASSFIFGPLRSVSM 301 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + I + V I + P + + L F ++ +K+ Sbjct: 302 GARMLMGIMTGFAVYVSDRVFGPISLVYAVPPILAAIAPSLLFGGISFYILSRKQ 356 >gi|28899417|ref|NP_799022.1| putative permease [Vibrio parahaemolyticus RIMD 2210633] gi|153839665|ref|ZP_01992332.1| inner membrane protein YjgP [Vibrio parahaemolyticus AQ3810] gi|260879348|ref|ZP_05891703.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034] gi|260895693|ref|ZP_05904189.1| conserved inner membrane protein [Vibrio parahaemolyticus Peru-466] gi|260900265|ref|ZP_05908660.1| conserved inner membrane protein [Vibrio parahaemolyticus AQ4037] gi|28807653|dbj|BAC60906.1| putative permease [Vibrio parahaemolyticus RIMD 2210633] gi|149746808|gb|EDM57796.1| inner membrane protein YjgP [Vibrio parahaemolyticus AQ3810] gi|308087429|gb|EFO37124.1| conserved inner membrane protein [Vibrio parahaemolyticus Peru-466] gi|308093070|gb|EFO42765.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034] gi|308107549|gb|EFO45089.1| conserved inner membrane protein [Vibrio parahaemolyticus AQ4037] gi|328471446|gb|EGF42341.1| putative permease [Vibrio parahaemolyticus 10329] Length = 366 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 118/356 (33%), Gaps = 19/356 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + + + S ++ I G +P + Sbjct: 2 IIVRYLIRETLKSQFAIFFVLFLVFVSQKFISVLADASDGDIPAGLIFSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+++++ TG L++ L+LA++ S + + Sbjct: 62 LMLPLSLYIGILITFGRLYAESEIVVMNATGIGNKFLVQAALYLALITSGVAAFNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + ++ L + + L++ F D + ++TL +F+ R Sbjct: 122 PWSQDRVEHLYEQVAAENSVDLLKKGQFQGTPDGSSVVFIDDIKDSTLSNVFVAQMRPRD 181 Query: 183 THK-----IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + + RQ I + +G + P + I KF Y Sbjct: 182 SVLPSVMFSSSGEVKELSDGRQVITMQEGTRYEGVPTRVEYMITKFDEYEGVIGQREVKQ 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L+ ++E R++ + V L++++ A Sbjct: 242 KGRDWEAYPTADLI----------GHPDPEAQAELQWRISLF---VCIPLLTMLVIPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFLL 352 + ++ + + ++ I F S +E I ++ + + ++ Sbjct: 289 VNPRQGRFAKMGPAILIYLAYFLAISATKSALEDGAIPAAIGMWPINAMLLIVAIM 344 >gi|218245029|ref|YP_002370400.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 8801] gi|218165507|gb|ACK64244.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 8801] Length = 395 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 51/374 (13%), Positives = 131/374 (35%), Gaps = 22/374 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRI-NLVSSSTESLNILLKISGYLIPT 59 + + YI + F+ + + I L + N V S L L+I +P Sbjct: 22 LSLMDRYIGGQLITPFIFGVGLVSSLGVAIGYLSDLGNKVVDSNLPLIKALEILLLKVPE 81 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 P + T ++ ++EL+ + G S LI P L L++++S F+ Sbjct: 82 FTAYALPISVMLTTLLTYGRLSSDSELIALRACGVSLSRLIAPALALSLVVSGITFVFNE 141 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL------------YIKISKYNPN 167 ++ P + K + ++++F+ +++ ++ ++ Sbjct: 142 LVVPTANYQATSILVKYLNEEHRFWQQKDIFYPDYEEISLPNGETIKRLKHLFYAEEFDG 201 Query: 168 NTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 ++ + I++ +KI + S + + ++ +G +++ +P + FK Sbjct: 202 ENMKALTILEWIGDSLNKIVISDSATWNANQNTWDFFNGNIYKIAPDASYKDTFGFKHRQ 261 Query: 228 LQTESANSSTIVL--KANDQNLSFLLNPNPNNPNYR-PELLETYRSEFHKRLTQWLFPVI 284 A + + N+ + L T++ ++++ V+ Sbjct: 262 FPLSKAPFEFALQGRNPYEMNIIQAQEYTKLLKMIGDQKNLRTFQVRIQQKMSFPFICVV 321 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL- 343 FGLI V + + + I ++ ++I + P + +L Sbjct: 322 FGLIGSVLGARPQQMSRSTSFGLS----VIIIFTYYVLGFLIGSLGLVGAISPFMAAWLP 377 Query: 344 -FCISSIFLLMIKK 356 F ++ ++ + Sbjct: 378 NFIGLAVGGWLLYR 391 >gi|301028101|ref|ZP_07191379.1| putative inner membrane protein [Escherichia coli MS 196-1] gi|299878818|gb|EFI87029.1| putative inner membrane protein [Escherichia coli MS 196-1] Length = 360 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 46/355 (12%), Positives = 117/355 (32%), Gaps = 3/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ + ++ + + +P + + Sbjct: 7 LDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQI 66 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 67 FFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAP 126 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+A + ++ L+ + ++ + + + Sbjct: 127 QGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNENRRL 186 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + YA + D + + L+ + +P S ++ + L Sbjct: 187 QSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVVALDP 246 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S L N + Y+ ++ Q L + L+++ Sbjct: 247 DALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVVMLMALSFIFGPLRSVPM 305 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P I L L I L ++ +K Sbjct: 306 GVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGAL-LPSASFFLISLWLLMRK 359 >gi|325297714|ref|YP_004257631.1| permease YjgP/YjgQ family protein [Bacteroides salanitronis DSM 18170] gi|324317267|gb|ADY35158.1| permease YjgP/YjgQ family protein [Bacteroides salanitronis DSM 18170] Length = 371 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 57/363 (15%), Positives = 124/363 (34%), Gaps = 7/363 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 +K + YI+ ++ + I+ I+ V I + I+ ++ L I+ IP Sbjct: 13 LKRLDRYIIVKFLGTYFFAIALIISISVVFDINENIDRFINNKAPLEAIVFDYYLNFIPY 72 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + +TG S L+ P + A ++S F+ Sbjct: 73 YTNLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRLMVPYMISAAIISAVTFMLGT 132 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + PK T + K + + Y + N N T + Sbjct: 133 EVIPKGSVTRLKFEEKYKKKKSADYARNIQLEVDSGVVAYMERYENYNKTGYRFSLDKFE 192 Query: 180 DTQTHKIYYAQSGSIDLDRQA-IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 D + A+ + D I+ D + + + I+ + ++ E + Sbjct: 193 DHKLVSHLTARRITYDTASYHKWIIRDYMIREMRGMKEVITRGERIDSIIKMEPQDFLIT 252 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + L ++ + E+H+R+ I I + + Sbjct: 253 RGQQETMTSPQLREYIQKQKQRGFANIKEFEVEYHRRIAMSFAAFILTAIGLSL---SSR 309 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL-LMIKKK 357 + + I L++SF + F I N P L +++ I +F+ + + K Sbjct: 310 KVKGGMGLHLGIGLALSFS-YILFQTISATFAINGNMPPALAIWIPNILYLFIAIYLYHK 368 Query: 358 YTK 360 K Sbjct: 369 APK 371 >gi|258625833|ref|ZP_05720712.1| conserved hypothetical protein [Vibrio mimicus VM603] gi|258582071|gb|EEW06941.1| conserved hypothetical protein [Vibrio mimicus VM603] Length = 366 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 52/357 (14%), Positives = 117/357 (32%), Gaps = 19/357 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + ++ + S +++L I G +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASDGEIPTSMILSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LA++ + + + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + QL + + L++ F R D + N L +F+ Sbjct: 122 PWSQDKEAQLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLHNVFVAQLAPRD 181 Query: 183 THK-----IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + RQ I L +G + P D I F SY + Sbjct: 182 SILPSVMFSNSGDVKELSDGRQIITLYNGTRYEGVPTRVDYMITNFDSYDGLIGQREVKS 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 LL ++E RL+ V L++++ A Sbjct: 242 SDRDWEALPTLSLL----------KNSDLQAQAELQWRLSL---VVCIPLLTMLVVPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + ++ + + ++ I F S I ++ I+ L+ + + ++ Sbjct: 289 VNPRQGRFAKMGPAILIYLTYFLALSATKSAI-EDGSLPVIIGLWPVNAALLIAALV 344 >gi|82546485|ref|YP_410432.1| hypothetical protein SBO_4178 [Shigella boydii Sb227] gi|81247896|gb|ABB68604.1| conserved hypothetical protein [Shigella boydii Sb227] Length = 361 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 46/355 (12%), Positives = 115/355 (32%), Gaps = 3/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ + ++ + + +P + Sbjct: 8 LDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQT 67 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 68 FFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAP 127 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + A+A + ++ L+ + ++ + + + Sbjct: 128 LGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNENRRL 187 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + YA + D + + L+ + +P S ++ + L Sbjct: 188 QSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVVALDP 247 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S L N + Y+ ++ Q L + L+++ Sbjct: 248 DALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPM 306 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P I L L I L ++ +K Sbjct: 307 GVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGAL-LPSASFFLISLWLLMRK 360 >gi|94266927|ref|ZP_01290580.1| permease YjgP/YjgQ [delta proteobacterium MLMS-1] gi|93452379|gb|EAT02998.1| permease YjgP/YjgQ [delta proteobacterium MLMS-1] Length = 400 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 58/348 (16%), Positives = 125/348 (35%), Gaps = 8/348 (2%) Query: 11 CIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFA 70 + F + L I + ++ +++ ++ + S L L++ Y+ P++L P Sbjct: 15 EMLAPFFAALLVINAVLFLGRLVPMLDEIFSLGVGLGDFLRVVAYITPSMLLFSLPMAAM 74 Query: 71 METTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIK 130 M T + + E++ + +G S ++ PV+F +L + + ++ P+ + + Sbjct: 75 MAVIIAFTRLAGDLEIMALKASGISLPRMLPPVVFFGLLTGLMTLATATVLIPRGMTAMD 134 Query: 131 QLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSRDTQTHKIYYA 189 QL + E F D+ + + +P+ G+++ D RD A Sbjct: 135 QLMIHLAKEHIEEGIREKTFSEGLGDVVLYVDDISPDQRFWHGVYLSDLRDKDNPLTISA 194 Query: 190 QSGSIDLDRQAII----LNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQ 245 Q G++ D A L+DG +HR + FK Y L+ + + + Sbjct: 195 QGGNLRADPAAGRVVLSLSDGSLHR--SAGAKSQTIFFKHYKLEIPLDSPTLGPPGRSSM 252 Query: 246 NLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKI 305 + L P Y E+H+RL + + ++ + + R + Sbjct: 253 TQAQLRQRATELGPEHPRQY-RYIGEYHQRLALPVGCFLLAMLGLSLSQMGQGSRLALGV 311 Query: 306 HPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 S + + + L LF ++ +LL Sbjct: 312 PLGLASFVAYYVLLTAAKSLGEAGTLPMALAIWLPNLLFLLAGGYLLW 359 >gi|226227979|ref|YP_002762085.1| hypothetical protein GAU_2573 [Gemmatimonas aurantiaca T-27] gi|226091170|dbj|BAH39615.1| hypothetical protein [Gemmatimonas aurantiaca T-27] Length = 362 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 51/356 (14%), Positives = 94/356 (26%), Gaps = 6/356 (1%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI R F ++ L + +VI ++ + + + Y IP L M Sbjct: 9 LDRYIATEFTRIFGVTILGFPVLVFVIDLVDNLRKYTERKLPAKAVALSYFYWIPDTLFM 68 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 V P T + + R +E+ +G S I P+L +A L I P Sbjct: 69 VLPAAVLFATVFSIGTFTRYSEITAAKASGISFYRFIAPILVMATLALGLDLAFGEIAPP 128 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + L + Y R ++ + I + Sbjct: 129 ANAIRLDLLEGTSSSRANDRYNFAFASDRGRIYRIYTLNVRDKAVDNIE--IEARGSDKK 186 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK---SYTLQTESANSSTIVL 240 + A + D + D V P F A T Sbjct: 187 PGMVVAARRAKWNDARRDWRLDSGVVHIIPDRTRDIAFSFDSLIDRDFHETPAELRTTER 246 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 ++ + L + T + E ++ + +I L A Sbjct: 247 DPSEMRFADLTR-FITVLERSGADVNTLKVERMLKIAIPVTCLIIALFGAPLATSSQRGG 305 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 I + + + I K P + + + +I LL + Sbjct: 306 AAYGIAVSLATTVLFLLLIQLTKAIGGKGIVEPELAAWIPNAVVGLFAIVLLSRVR 361 >gi|152978627|ref|YP_001344256.1| permease YjgP/YjgQ family protein [Actinobacillus succinogenes 130Z] gi|150840350|gb|ABR74321.1| permease YjgP/YjgQ family protein [Actinobacillus succinogenes 130Z] Length = 368 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 46/357 (12%), Positives = 124/357 (34%), Gaps = 19/357 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + +S ++ I + Q+++ + ++ +++ + G +P + Sbjct: 2 ILTRYLTREVLKSQAAVLFILLLIFFSQQLVRVLGSAANGNVPADLVFSLLGLGMPAMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P C + + +E+ ++ G + L++ VL L+ +I + + Sbjct: 62 LMLPLCLFIAILLTFGRLYAESEITVMRACGVGQRILVRVVLLLSFFTAILAAYNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+ + L F +++ ++ +N + +++ +R Sbjct: 122 PWAIQKQTEIVEDAKANPRMAALSAGQFMVSNNNDFVLFINNIKDNQINDVYLFQTRQKG 181 Query: 183 T--HKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G + Q + L + + S D I +F Y ++ Sbjct: 182 NAKPSVVTAEKGELKSLPNGDQILSLANSQRFEGSAALPDFRITRFDEYQAYLGHQSAGA 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 I +A + + L ++E H RLT L + LI++ Sbjct: 242 IENEAEVLDFNTL----------TQLNTPAAKTELHWRLTLILAVPLMALIAV---PMSR 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKI-EQNPYYIPILYLFLFCISSIFLLM 353 + ++ + + +L + F S + + L + +++ Sbjct: 289 VNPRQGRFAKMLPALLLYLIYFLAQSSLKSAGTAGKLDAGIFMPLVNIVFLLLGIVL 345 >gi|229524483|ref|ZP_04413888.1| hypothetical protein VCA_002078 [Vibrio cholerae bv. albensis VL426] gi|229338064|gb|EEO03081.1| hypothetical protein VCA_002078 [Vibrio cholerae bv. albensis VL426] Length = 366 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 52/347 (14%), Positives = 114/347 (32%), Gaps = 19/347 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + ++ + S +++L I G +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLAEASDGEIPTSMILSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LA++ + + + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + L + + L++ F R D + N L +F+ Sbjct: 122 PWSQDKEAHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLYNVFVAQLAPRD 181 Query: 183 THK-----IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + + RQ I L DG + P D I F SY + Sbjct: 182 SILPSVMFSHSGDVKELSDGRQIITLYDGTRYEGVPTRVDYMITNFDSYDGLIGQREVKS 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 LLN ++E R++ V L++++ A Sbjct: 242 AERDWEALPTLSLLN----------NADRRAQAELQWRISL---VVCIPLLTMLVVPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 + ++ + + ++ I F S I ++ I+ L+ Sbjct: 289 VNPRQGRFAKMGPAILIYLTYFLALSATKSAI-EDGSLPVIIGLWPI 334 >gi|307611507|emb|CBX01181.1| hypothetical protein LPW_28801 [Legionella pneumophila 130b] Length = 359 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 45/369 (12%), Positives = 120/369 (32%), Gaps = 22/369 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + + + +V I Q +Q +N +S + +++K+ +P ++ Sbjct: 2 IIFRYLTKEVFLTLIALTAILVLIFMSNQFIQYLNRAASGSIPGFVIMKLLMLELPNLMG 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + + +E+ ++ G L+K +A ++ + + I Sbjct: 62 LLLPLGFYIALLLAYGRLYAESEMTVLRACGYGPRQLLKHSFAMATVVLVVVAIVMIWAS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +L + + F ++ I + + Q I ++ + Sbjct: 122 PVIAVERTKLIRSTGIKTLIQTIMPGRFHAINSGQQIFYVQSMNRDHSQAEQIFMAKHSV 181 Query: 183 THKIYY---------AQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 + + I+L +G+ ++ P D I +F SY + + Sbjct: 182 QDNKLLWDVLWADKAFAEVNPQTGEEYIVLQNGKEYQGVPGHADYQIAEFASYKSKLPNP 241 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + A L N ++ +E R++ L + L+++ Sbjct: 242 TV-VMHDDARTAKTRDLWPLNNHDLKKA--------AELQWRISIPLMVLTLTLVAVPL- 291 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-PYYIPILYLFLFCISSIFLL 352 + + K + ++ I I + ++ ++ + +L Sbjct: 292 --SRVSPRSGKYSKLLPAIIIYIFYANFMFVSRDAIATGKIPWWIGMWWVHVAVAILGIL 349 Query: 353 MIKKKYTKI 361 I + K+ Sbjct: 350 FIWRNQVKL 358 >gi|289209273|ref|YP_003461339.1| permease YjgP/YjgQ family protein [Thioalkalivibrio sp. K90mix] gi|288944904|gb|ADC72603.1| permease YjgP/YjgQ family protein [Thioalkalivibrio sp. K90mix] Length = 357 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 44/355 (12%), Positives = 107/355 (30%), Gaps = 5/355 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 Y++R + ++ + +V + V ++ + + + + +P + Sbjct: 3 TVLGRYVIRQVLIGTTLAVVLLVALDAVFAMIDELRDTGAGNYGVTEAMLYVALTLPRRM 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ N+EL + G + I VL +++ + + I Sbjct: 63 YEMLPPAALVGGLLWLGNLAANSELTAMRAAGMTLGRFIVWVLQAGLVVVMVMLIIGEFF 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + KA + + D I N L G+ I++ Sbjct: 123 APASETR--AQALKASAFDEEISVGSMGLWARDGQRMIHAESVLAGNQLVGVRIIEFTGD 180 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + ++ L D E S ++ +V++ Sbjct: 181 REPSWIT-RAARARFVDGDWRLEDVERSLLSHDRVVAEHRAEETIDRLIAPEYFDVLVVE 239 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + L + + Y F +R T + L++I Sbjct: 240 PSQMAALDL-SRYIDYLRENQLDAAPYEVAFWQRFTLPASTFVMLLLAIPFLFGSQREGG 298 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + I I++ +SF + + + P + L + +I L +++ Sbjct: 299 AGQRLFIGIAIGVSFVIVMRAITHLGLVYNLPPLLAAC-LPVLLFLAIALFALRR 352 >gi|323492969|ref|ZP_08098107.1| hypothetical protein VIBR0546_19372 [Vibrio brasiliensis LMG 20546] gi|323312800|gb|EGA65926.1| hypothetical protein VIBR0546_19372 [Vibrio brasiliensis LMG 20546] Length = 367 Score = 107 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 44/353 (12%), Positives = 119/353 (33%), Gaps = 19/353 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L + + ++++ + S ++++ +P++ Sbjct: 2 IIVRYLIRETLKSQLAIFFILFLVFLSQKLIKVLADASDGDIPASLVMHYVALSMPSMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LA++ + + + Sbjct: 62 LMLPLSLFLGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLAVITGVIAGFNSFVFS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + + QL + + + L++ F D + L+ +F+ R Sbjct: 122 PYSQDKLVQLQEEVEAENSVDLLKKGHFQGTPDGSSVVFIDDIDGKQLKHVFVAQMRPRD 181 Query: 183 T-----HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + + RQ I + DG + P D + KF Y + Sbjct: 182 SILPSVSFSQSGEVKELSDGRQVIRMYDGTRYEGVPTRVDYMVTKFDQYEGLIGQRDVKR 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 L+ ++E R++ V L++++ A Sbjct: 242 KGRDWEAIPTLELM----------KNPDPRAQAELQWRISL---VVCIPLLTMLVVPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 + ++ + + ++ I F S + ++ I+ ++ + + Sbjct: 289 VNPRQGRFAKMGPAILIYLAYFLSISATKSAL-EDGSIPAIIGMWPINAALLL 340 >gi|304311790|ref|YP_003811388.1| Predicted permease YjgP/YjgQ [gamma proteobacterium HdN1] gi|301797523|emb|CBL45743.1| Predicted permease YjgP/YjgQ [gamma proteobacterium HdN1] Length = 352 Score = 107 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 50/356 (14%), Positives = 110/356 (30%), Gaps = 5/356 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + YI + S L IV + V + + + + + L+ IP Sbjct: 1 MRLLDRYIGVSVLTSVAGMLLLIVGLDVVFSFIGELEDL-KNQYQMPQALQYILLTIPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L + +EL +I G S + ++ + +L+ + + Sbjct: 60 VYDYVPVATLIGCLIGLGMLANTSELTVIRAAGVSVMRIVWSAVKPVLLVVVGALVLGQY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + PK + L ++R D+ + + V D Sbjct: 120 VVPKTEQYAQGLRTLWIDGSDTISSRNGFWYREGDEFFHVNAIQTDGVVYGLARYVFDGD 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + YA+ G + L + R + M+ ++ Q S +VL Sbjct: 180 QRLLEAEYAERGVF--EGDHWRLENVRRTRFDQDHTQYATMESSTWRSQITPQLMSLVVL 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K +L+ L + + + F K+ Q ++ I+I Sbjct: 238 KPTALSLTDLY-TFARYRDQQSISSGQFYYAFWKKTLQPATTIVMVFIAISFIFGPLRSV 296 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + I + + F I + P I L + + + ++++ Sbjct: 297 TMGQRLITGIIVGLVFTYAQDMLGHISVVYNVPPLIAA-GLPIAIFLGVGIKLLRR 351 >gi|55980366|ref|YP_143663.1| hypothetical protein TTHA0397 [Thermus thermophilus HB8] gi|55771779|dbj|BAD70220.1| conserved hypothetical protein [Thermus thermophilus HB8] Length = 347 Score = 107 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 49/357 (13%), Positives = 116/357 (32%), Gaps = 10/357 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ + Y+LR F L IV + + + + + + LL+ + P Sbjct: 1 MKTLDRYLLRETLPLFGGGLLVIVLLFLGGAVYEVLAPLVAKGADPYTLLRYLLFRTPEA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + +L+ + + EL + G R L+ P L L +++ F+ Sbjct: 61 LARGAPVAYLFALLVLLSRLGEDAELKALLALGVRRERLLLPFLLLGTAIALAAFLLGEG 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ + + L + L + L F+ + + K + Sbjct: 121 LVPQALAKGQDLLRREVLERPRALLTPGATFQDAQGRVVYVGKVEGEAIGALRVLSREEV 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + G + ++ I +G R ++ +F+ L + Sbjct: 181 LLAERG-SFRGGVLHVEEGTRITYEGSRPR--------TLARFQRGELVLKDLTFDPWQN 231 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 AN L+ L + +++R + L +F L ++ A Sbjct: 232 PANRMTLAEL-RKEVQRLRQMGVRAGLEATTYYRRFAEPLAAPVFALFAVGLAFYLLGGS 290 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + + + + + + + +P+ L+ +FL + ++ Sbjct: 291 RSLGLVGVAVLTFFYYATWSVGRIMGEQNALDPFLAAFGPNLLYGALGLFLFLGGRR 347 >gi|258648441|ref|ZP_05735910.1| putative membrane protein [Prevotella tannerae ATCC 51259] gi|260851193|gb|EEX71062.1| putative membrane protein [Prevotella tannerae ATCC 51259] Length = 428 Score = 107 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 52/366 (14%), Positives = 126/366 (34%), Gaps = 10/366 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 + + YI+ +++ I+ IA + ++I+ + S I IP Sbjct: 67 LTRLDRYIIYKFLSTYIFLIGIIISIAIIFDYNEKIDKFEKAHVSWTKIAFDYYLNFIPY 126 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + +TG S L++P + A ++++ F Sbjct: 127 FSNLFSPLFVFIAVIFFTSKLADNSEIIAMKSTGMSFRRLLRPYMISAAIIALTSFGLGA 186 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + PK + L EN+ ++D + + IS+++ F +D Sbjct: 187 YVIPKGNVARVNFENRYIKKLNAPTSVENVQMQVDTGVVVYISRFDNETKSGYGFSLDKF 246 Query: 180 DTQTHKIYYAQSGSIDLD----RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + + + L + + + + IS + E + Sbjct: 247 YGKKLIDHLTAQSIQYDTLAGKKNQWTLRQVQQRKMRGLRERISYADKVDTIIMMEPQDF 306 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + + + L + + E+HKR I LI + Sbjct: 307 FYVRNQQETMTVPELRQFIDKQQMRGAAGVSLFEVEYHKRFAMPFAAFILTLIGVSL--- 363 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM-I 354 + R+ I + +++SF + F I N + P+L +++ + + + + Sbjct: 364 SSQKRKNGMGTSIGVGIALSFS-YILFQTISSSFAVNANWSPMLSVWIPNLLFVLIAFGL 422 Query: 355 KKKYTK 360 K+ + Sbjct: 423 YKRTPQ 428 >gi|319788013|ref|YP_004147488.1| permease YjgP/YjgQ family protein [Pseudoxanthomonas suwonensis 11-1] gi|317466525|gb|ADV28257.1| permease YjgP/YjgQ family protein [Pseudoxanthomonas suwonensis 11-1] Length = 366 Score = 107 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 48/358 (13%), Positives = 110/358 (30%), Gaps = 7/358 (1%) Query: 5 ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 +LYI R + S L++ +V + V+ + ++ + + L + Y +P + Sbjct: 9 DLYIGRVVLASVLLTWAVLVGLDVVLALSGQLGDLGKGSYDFPTALAVVAYSVPRRAYTI 68 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P+ + + L + +EL + G SR L V +LL+ + ++ + P Sbjct: 69 FPYAAVIGSLLGLGQLAGTSELTALRALGLSRRRLSISVAAALVLLTGLMVVTGETLAPW 128 Query: 125 CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS-----KYNPNNTLQGIFIVDSR 179 + QL A+ L+ R D I + + Sbjct: 129 GQRQADQLKLAAKNNNVAMARYSGLWAREGDTFLNAIDGQERVEGGQRVLELRDVRLYEV 188 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + ++G + D L D + + + + + ++ + V Sbjct: 189 GEEGEVRSLTRAGLVVHDANGWQLRDVRRVAFTGAGAVEETAEEQKWDSELDANALAAGV 248 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + + + S L + Y + R L + L ++ A Sbjct: 249 TRPRNLSASDL-QASIEYRRRNGLDARDYEDTYWSRWFYPLNVLALCLAAVPFAFGSLRS 307 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 K + I ++ F + + Y L + + + ++K Sbjct: 308 GGMGKRLFLGIVFALGFML-LQMQFGRLAGAFRFDYRIAYALPPVLMLATSWFLFRRK 364 >gi|259419234|ref|ZP_05743151.1| permease YjgP/YjgQ [Silicibacter sp. TrichCH4B] gi|259345456|gb|EEW57310.1| permease YjgP/YjgQ [Silicibacter sp. TrichCH4B] Length = 368 Score = 107 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 53/362 (14%), Positives = 119/362 (32%), Gaps = 15/362 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 +LY + + FL+ ++ + +I + ++ LL+++ P L Sbjct: 2 ILDLYYAKRFFQWFLVIAAVLMSLVMLIDLSEQFRRFDGQDLQFGQLLELTLLNTPAALN 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + T + M R++EL++ G S I + P + +A++L + N I Sbjct: 62 EFLPLIMILTTIVLYVGMARSSELVVTRALGRSGIRALLPPVVVALILGGLAVSTLNPIV 121 Query: 123 PKCRSTIKQLSAKAQLA----LTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD- 177 + LS + E + + I N + +F+ D Sbjct: 122 AATTNRFDSLSESYRQTGGPAAVSLSGEGLWLRQGGQNGQSVIHAANYRGDAENLFLYDV 181 Query: 178 ---SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI-SKDISIMKFKSYTLQ--TE 231 + + LD + +L D +V + + + S + L Sbjct: 182 SILTYTPDGGPTRRTIAAEARLDGEDWVLRDAKVWQLIVGVNPERSAKSYDELRLPTTLT 241 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 + + A ++ L + + ++ L + LF V L+ Sbjct: 242 NERIRDTLGYAEGISIYEL-PQTIKSLSEAGFSTTRFQVWLQVELARPLFLVAMVLVGAA 300 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 R + S+ + F +++ ++ + +N +L + ++SI L Sbjct: 301 F--TMRHTRLGGTGIAVLTSVLLGFALYFVHNFA-RILGENGQIPILLAAWAPPVASILL 357 Query: 352 LM 353 M Sbjct: 358 TM 359 >gi|114319720|ref|YP_741403.1| permease YjgP/YjgQ family protein [Alkalilimnicola ehrlichii MLHE-1] gi|114226114|gb|ABI55913.1| permease YjgP/YjgQ family protein [Alkalilimnicola ehrlichii MLHE-1] Length = 372 Score = 107 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 49/361 (13%), Positives = 133/361 (36%), Gaps = 22/361 (6%) Query: 5 ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 + Y++R + ++L L + + +++ + + ++L + G L M+ Sbjct: 10 DRYLVREVLFAWLAVLLVLFAVLATNRLIGYLGDAAGGELPGGVILTLLGLQTVRYLGMI 69 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P F + + R++E+ ++ G + +L+LA+ L+ + + P Sbjct: 70 LPASFFLGIVLAFGRLYRDSEMAVMSACGIGPWRQFRALLWLALPLAGLVGLLSLYWGPA 129 Query: 125 CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL--YIKISKYNPNNTLQGIFIVDSRDTQ 182 +Q+ A+A+ + F+ L+ F + + + + + + + + T Sbjct: 130 ATQKAEQVQAEAEAQVEFAALQAGRFLQARGATEGTLYLERLSEDQREMEDVFIRAGGTA 189 Query: 183 THKIYYAQSGSIDLD----RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS-T 237 + A+ G + D + ++L DG + P + D + +F+ + + + Sbjct: 190 DRVVLAARRGVQEKDPETGDRYLVLLDGWRYDGRPGAADWRVTRFERHGVLVAEGSEEVA 249 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L+ N Q + L R+E RL ++ ++A Sbjct: 250 VRLRRNAQPTAELW----------GSDHPADRAEVQWRLAMPAMTLLLA---LLAVPLSK 296 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMIK 355 + + + ++ + G F + + Q P + + +L ++ L ++ Sbjct: 297 SAPRDGRYGRLLSAVLVYVGYFQFLTVGQDWLETGQVPAALGLWWLHGAVLAVGVLGLLW 356 Query: 356 K 356 + Sbjct: 357 R 357 >gi|333030546|ref|ZP_08458607.1| permease YjgP/YjgQ family protein [Bacteroides coprosuis DSM 18011] gi|332741143|gb|EGJ71625.1| permease YjgP/YjgQ family protein [Bacteroides coprosuis DSM 18011] Length = 363 Score = 107 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 49/363 (13%), Positives = 125/363 (34%), Gaps = 7/363 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 + + YI++ +++ + ++ IA V +R++ ++ + I+ +P Sbjct: 5 LTRIDRYIIKKFLGTYIFAITLVISIAVVFDFTERMDRFMNNNAPWDAIIFDYYFNFVPY 64 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + + + + + N+E++ + +TG S L+KP + A ++++F F+ Sbjct: 65 FANLFSALFVFIAVIFFTSKLAENSEIIAMLSTGMSFSRLMKPYMISAAIIALFTFVLGG 124 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + PK + + S + + + N T + + Sbjct: 125 YVIPKGSVARVEFEDQYYKKRKKSSARNIQLQVEEGLIAYIDRYSDYNKTGYRVILDKFE 184 Query: 180 DTQTHKIYYAQSGSIDLDR-QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + A+S + D L D V + + IS K L + ++ Sbjct: 185 GKKLSSHLTARSITYDSTAVNMWTLKDYTVRDFDGLHEYISKGDSKDTVLAMDPSDFLEF 244 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + L + + + E+HKR+ I +I + Sbjct: 245 QNQEQMMTNPELRAHIDKQKSRGFGNTKVFEIEYHKRIAMSFAAFILTIIGASL---SSR 301 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF-CISSIFLLMIKKK 357 +R + + L++SF + F I + P++ +++ + + + +K Sbjct: 302 KAKRGMGLHLGVGLALSFS-YILFQTISGTFAVSGVVSPMVSMWIPNILYAFIAYYLYRK 360 Query: 358 YTK 360 + Sbjct: 361 APR 363 >gi|299771880|ref|YP_003733906.1| permease YjgP/YjgQ family protein [Acinetobacter sp. DR1] gi|298701968|gb|ADI92533.1| permease YjgP/YjgQ family protein [Acinetobacter sp. DR1] Length = 366 Score = 107 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 51/354 (14%), Positives = 120/354 (33%), Gaps = 14/354 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + + L+ + I ++++ + + +IL I GY +P L Sbjct: 2 IIRRYLVKQVVSTSLVVISLLTLIMMGGRLIKYFGVAAQGRLDASILFSIIGYRLPEFLT 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + V + + E+ +++ +G SR L + ++ + ++ + + + Sbjct: 62 LILPLGFFIGLMLVFGRLYVDHEMAVLNGSGVSRHQLARLLIPMTLVYMVCQSVLMLWMT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++L+ + F + F S L+ IF + Sbjct: 122 PWGLREFEKLTTTQAVRTGFDLVRPREFISSGPYTIYAGSLSEDRKNLKDIFFYQRATKE 181 Query: 183 THKIYYAQSGSIDLDR------QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + L G + P + +F+SY L+ E+ Sbjct: 182 DKPDVMILAKEATRVEVANDTANVVDLVQGRRYEIFPGQPKYTQAEFQSYRLRLENDKDV 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + L N+P RSE RL +I ++S+ ++ Sbjct: 242 KFESGDVEALSTTKLFSKTNDPV--------IRSELGWRLFGPFTIIIALMLSVALSEVS 293 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 + ++ P S + I K E + + P + + +++F Sbjct: 294 PRQGRYYRLIPAIFIFSSLIVLMIAIKTRISKEELDIWAYPAVLVVYGVAAALF 347 >gi|94263395|ref|ZP_01287209.1| permease YjgP/YjgQ [delta proteobacterium MLMS-1] gi|93456231|gb|EAT06365.1| permease YjgP/YjgQ [delta proteobacterium MLMS-1] Length = 400 Score = 107 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 58/348 (16%), Positives = 125/348 (35%), Gaps = 8/348 (2%) Query: 11 CIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFA 70 + F + L I + ++ +++ ++ + S L L++ Y+ P++L P Sbjct: 15 EMLAPFFAALLVINAVLFLGRLVPMLDEIFSLGVGLGDFLRVVAYITPSMLLFSLPMAAM 74 Query: 71 METTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIK 130 M T + + E++ + +G S ++ PV+F +L + + ++ P+ + + Sbjct: 75 MAVIIAFTRLAGDLEIMALKASGISLPRMLPPVVFFGLLTGLMTLATATVLIPRGMTAMD 134 Query: 131 QLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-LQGIFIVDSRDTQTHKIYYA 189 QL + E F D+ + + +P+ G+++ D RD A Sbjct: 135 QLMIHLAKEHIEEGIREKTFSEGLGDVVLYVDDISPDQRFWHGVYLSDLRDKDNPLTISA 194 Query: 190 QSGSIDLDRQAII----LNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQ 245 Q G++ D A L+DG +HR + FK Y L+ + + + Sbjct: 195 QGGNLRADPAAGRVVLSLSDGSLHR--SAGAKSQTIFFKHYNLEIPLDSPTLGPPGRSSM 252 Query: 246 NLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKI 305 + L P Y E+H+RL + + ++ + + R + Sbjct: 253 TQAQLRQRATELGPEHPRQY-RYIGEYHQRLALPVGCFLLAMLGLSLSQMGQGSRLALGV 311 Query: 306 HPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 S + + + L LF ++ +LL Sbjct: 312 PLGLASFVAYYVLLTAAKSLGEAGTLPMALAIWLPNLLFLLAGGYLLW 359 >gi|159903539|ref|YP_001550883.1| putative permease [Prochlorococcus marinus str. MIT 9211] gi|159888715|gb|ABX08929.1| Predicted permease [Prochlorococcus marinus str. MIT 9211] Length = 401 Score = 107 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 58/373 (15%), Positives = 133/373 (35%), Gaps = 23/373 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQ-ILQRINLVSSSTESLNILLKISGYLIPTVL 61 + ++L + L + ++ + + + + S NI +++ IP L Sbjct: 31 LLDRWLLGELIPPLLFAISAFTVVSLSVGVMFDLVRQIVESGLPFNIAIQVFLLRIPGFL 90 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P M T + ++ N+EL + + G S +I P + LA+L++ FI N I Sbjct: 91 VLSFPMAMLMATLLAYSRLSSNSELKALRSLGVSTKRMIAPAMALALLITSITFIFNNSI 150 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-------------YIKISKYNPNN 168 P + + + + + E++ F + ++ + N Sbjct: 151 VPISNRNSEYILQNSLGKAISNQIGEDIIFSRKGRIDGLKDEKKRKSLTHLFYAGKIDKN 210 Query: 169 TLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 + + ++D ++ A + + DG + SP + + + KF+SY+ Sbjct: 211 KISKLTLLDFSKKGYTQMIVANKALWNESKGIWDFIDGMMLTLSP-TGNTTTTKFQSYSY 269 Query: 229 QTESANSS--TIVLKANDQNLSFLLNPNPNNPNYRP-ELLETYRSEFHKRLTQWLFPVIF 285 + +I AND +S L + R ++ T + ++F Sbjct: 270 PLGTGPIKIGSIPKDANDMTVSEALKAEQLYLKSGNIKEARRMRVRIQEKFTLPMACIVF 329 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF--L 343 GLI K + R + + + +++ S+ + + P + + Sbjct: 330 GLIGSTLGAKPSTTTSRSQGFGVSV---FLILIYYVLSFSFSSLGVSGALTPFFAAWTPV 386 Query: 344 FCISSIFLLMIKK 356 F + ++KK Sbjct: 387 FLSLAGGAFLLKK 399 >gi|311745737|ref|ZP_07719522.1| membrane protein [Algoriphagus sp. PR1] gi|126575180|gb|EAZ79530.1| membrane protein [Algoriphagus sp. PR1] Length = 357 Score = 107 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 49/352 (13%), Positives = 114/352 (32%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + I++ +++ L ++ I V+ ++ + + ++K + Sbjct: 1 MKLLDKLIIKDFLKTYFFVVLMLILIVLVLDFTEKNDSYIRNDVPSGEIMKYMINYGLYL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++TP + + + M TE++ I ++G S +++P +F A+L+ F+ Sbjct: 61 NNLLTPITVFISVIFITSKMAGRTEIIAILSSGVSFPRMLRPFIFAAMLIGGVSFLLNGW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + D Y NT + RD Sbjct: 121 VLPVATEGVTKFKLTYIDKTRTASDPNVHIKVGTDSYAYLSRFYKTGNTGYHFTLETIRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + D + L + + +D S+ + TL + Sbjct: 181 GRLINKLSSDRIQWDTAKNVWTLKNWRFRELNEFGEDYSVGEEMDTTLSITPDDFDLPEN 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 L L + + + Y+ E + R +I I ++ + K++ Sbjct: 241 HHETLKLPELSRQIRVLEDRGADNVAFYKIERYVRFMSPFAAIILTFIGVIMSAKKSRGG 300 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 +I F+ I +F P + L +F ++ + L Sbjct: 301 SGFQIAMGFLLAFIYILLFILSRTFAENGASYPIFAVWLPNIVFGLTGLVLY 352 >gi|146277167|ref|YP_001167326.1| permease YjgP/YjgQ family protein [Rhodobacter sphaeroides ATCC 17025] gi|145555408|gb|ABP70021.1| permease YjgP/YjgQ family protein [Rhodobacter sphaeroides ATCC 17025] Length = 364 Score = 107 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 36/362 (9%), Positives = 88/362 (24%), Gaps = 12/362 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 YI R R + L + +I +L ++ S +L +S +P + Sbjct: 2 ILSRYIARRFLRMVFIVFLVFFGLMMLIDVLDQMRRFSDEGITLVQAGLLSLLRVPATIY 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + + + R +EL+++ G S + + + +A+ + N I Sbjct: 62 TILPLIVILAAVALFLGLARTSELVVVRAAGRSGLRFLVAPMIVALAIGAAAVTVLNPIV 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFR------LDDDLYIKISKYNPNNTLQGIFIV 176 +++ + L + + Sbjct: 122 AGTSRQYDAAASRLARGEASILSISEEGLWLRQGGAEGQTVIHAARSNTDGTRLYAVTFL 181 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVH-RKSPISKDISIMKFKSYTLQTESANS 235 + A + + + ++ Sbjct: 182 TFDGNGLPRSRVAAEQAALETGYWQLSGAKSWDLTLANPEASANLEGNIRVPSDLTREGI 241 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + + L +R L L++ A Sbjct: 242 QDSFGDPSAIPIWEL-PAYVAGLERAGFSARKHRVWMQMELALPFMLAAMVLVA--AGFT 298 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLM 353 R + ++L FG+F+ ++ Q P + L + L+ Sbjct: 299 MRHSRFGGTGRMVLLALLSGFGLFFLRNFAQVLGENGQIPILLAAWSPPLIGVMGSLGLL 358 Query: 354 IK 355 + Sbjct: 359 LH 360 >gi|269140437|ref|YP_003297138.1| hypothetical protein ETAE_3096 [Edwardsiella tarda EIB202] gi|267986098|gb|ACY85927.1| hypothetical protein ETAE_3096 [Edwardsiella tarda EIB202] gi|304560230|gb|ADM42894.1| Putative inner membrane protein [Edwardsiella tarda FL6-60] Length = 356 Score = 107 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 45/353 (12%), Positives = 116/353 (32%), Gaps = 2/353 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI R I + +M+ +V ++ +I+ + ++ V S+ + IP + + Sbjct: 5 LDRYIGRTIFNTIMMTLFMLVSLSGIIKFVDQLRKVGQGDYSVAGAGLFTLLSIPKDIEI 64 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ G +R+ + V+ AI L + + P Sbjct: 65 FFPMAALLGALLGLGMLAQRSELVVMQAAGFTRMQVASAVMKTAIPLVLLTMAIGEWVAP 124 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+ Q+ + + D + ++ I++ + TL G+ I + Sbjct: 125 QGDQAARNYRAQ-QMYGGSLLSTQGGLWAKDGNQFVYIAQVVNDRTLGGVSIYTLNAQRK 183 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 + + +Q + E + P S + + + + Sbjct: 184 LTSLRYAASATFDGKQWKLAQVEESNLTDPKMITGSRTLSGVWKTNLTPDKLGVVAVSPD 243 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 ++S L + + Y+ ++ L + L+++ Sbjct: 244 SLSISGLYH-YVKYLKQSGQESSRYQLNLWSKIFAPLSVAVMMLMALSFIFGPLRSVPMG 302 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 I F V + + P I + + L++++ Sbjct: 303 VRVLTGICFGFVFYVLDQIFGPMSLVYNVPPVIGAVLPSALFLGLSVYLLLRR 355 >gi|113460663|ref|YP_718729.1| permease [Haemophilus somnus 129PT] gi|112822706|gb|ABI24795.1| conserved permease [Haemophilus somnus 129PT] Length = 356 Score = 107 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 48/357 (13%), Positives = 126/357 (35%), Gaps = 3/357 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + + YI + I + L + L +V ++ +I+ +++ + T + + +P Sbjct: 2 MNTLDRYIGKNILGAILATLLMLVGLSAIIKFVEQFRSIGKGTYDVIQATLFTLLTMPKD 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + L ++ +EL++I + G SR + V+ A+ L + I Sbjct: 62 IETFFPMAALLGSLIALGNLASRSELIVIQSAGFSRFRIGLAVMKTALPLMLITMIIGEW 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + ++ +N + D + +I + + + L I+I D Sbjct: 122 GIPQTEH-FARDMRAKAISGGSMLSVKNSIWARDSNDFIYVGRITNDIRLNDIYIYSFDD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + K + + + + + + K I+ +K +++ L Sbjct: 181 KRQLKQVTHANQASFEHGKWKLSGINQSQIFADEIKTINRLK-DNWSTTLTPDKLGIASL 239 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + +++ L N + + + F +++ Q + + ++++ Sbjct: 240 RPTSLSMTGLYN-YIKFMKETGQDAKRFELTFWQKVFQPVSVAVMMMLALSFIFGSLRSV 298 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I F V + + P + L L + I+ L+ +K+ Sbjct: 299 TAGARIVTGIFFGFLFYVINEILGRLSLLYDIPIVLAALIPSLLFMILIWWLLNRKR 355 >gi|262170557|ref|ZP_06038235.1| predicted permease [Vibrio mimicus MB-451] gi|261891633|gb|EEY37619.1| predicted permease [Vibrio mimicus MB-451] Length = 366 Score = 107 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 52/357 (14%), Positives = 117/357 (32%), Gaps = 19/357 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + ++ + S +++L I G +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASDGEIPTSMILSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LA++ + + + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + QL + + L++ F R D + N L +F+ Sbjct: 122 PWSQDKEAQLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLHNVFVAQLAPRD 181 Query: 183 THK-----IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + RQ I L +G + P D I F SY + Sbjct: 182 SILPSVMFSNSGDVKELSDGRQIITLYNGTRYEGVPTRVDYMITNFDSYDGLIGQREVKS 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 LL ++E RL+ V L++++ A Sbjct: 242 SGRDWEALPTLSLL----------KNSDLQAQAELQWRLSL---VVCIPLLTMLVVPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + ++ + + ++ I F S I ++ I+ L+ + + ++ Sbjct: 289 VNPRQGRFAKMGPAILIYLTYFLALSATKSAI-EDGSLPVIIGLWPVNAALLIAALV 344 >gi|325860534|ref|ZP_08173638.1| permease, YjgP/YjgQ family [Prevotella denticola CRIS 18C-A] gi|327313657|ref|YP_004329094.1| permease [Prevotella denticola F0289] gi|325481919|gb|EGC84948.1| permease, YjgP/YjgQ family [Prevotella denticola CRIS 18C-A] gi|326944618|gb|AEA20503.1| permease, YjgP/YjgQ family [Prevotella denticola F0289] Length = 405 Score = 107 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 50/359 (13%), Positives = 120/359 (33%), Gaps = 8/359 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPTVL 61 + YI+R +++ + L I+ IA V + ++ + I+ IP Sbjct: 47 ILDWYIIRKFIGTYIYAILLIISIAIVFDFNENLSKFTQYHAPWRAIVFDYYANFIPYYS 106 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + +P + + + N+E++ + G S L++P + +L++ F + + Sbjct: 107 NLFSPLFVFIAVIFFTSKLAGNSEIIAMLAAGVSIRRLMRPYMISCVLIAGLTFYLNSFV 166 Query: 122 EPK---CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 P R + L ++ + ++ + + ++Y + I D Sbjct: 167 IPHGTVIRQNFESLYRNSKKNTSAENVQLYVAKNTTAYIQHYDNQYKRGYGFSLVKIKDK 226 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + Q ++ + L++ ++ + + I K L E + Sbjct: 227 KIVSHMTAMEIQYDTVADTKFHWRLSNWKMRTLKGLKEHIQSGASKDTVLLMEPTDLVYS 286 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + LL+ + + Y EFHKR+ I +I + + Sbjct: 287 KGQQETFTSPELLDYISKQTSRGSGNVVQYEVEFHKRIAMSFSSFILTIIGLSL---SSR 343 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 R+ + I L++SF + + P+L ++ I + + Sbjct: 344 KRKGGMGLYLGIGLALSFS-YIMLQTVSSTFAIQADTPPLLAAWIPNIIFAVIAYFCYR 401 >gi|323496139|ref|ZP_08101199.1| lipopolysaccharide ABC transporter permease [Vibrio sinaloensis DSM 21326] gi|323318883|gb|EGA71834.1| lipopolysaccharide ABC transporter permease [Vibrio sinaloensis DSM 21326] Length = 356 Score = 107 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 44/358 (12%), Positives = 122/358 (34%), Gaps = 5/358 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +LYI R I + M ++ ++ +I+ ++++ V + L +P + Sbjct: 3 KILDLYIGRTIIATTTMVLATLIGLSGIIRFVEQLRSVGRGSYDLLHAFYFVVLGVPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M + L + ++EL+++ +G S++ + VL A+ L + + + Sbjct: 63 EMFFAMSALLGALIGLGMLASSSELVVMQASGYSKLDIGISVLKTAVPLMLIIMLLGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + + ++ + D D +I I K +N D Sbjct: 123 APQAQ-KMARELRSFSISGGQIVSVRAGVWARDADDFIFIGKVEDDNLYGLKVWRFDEDK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + +++ +A + Q ++ + + S ++ ++ + + ++ Sbjct: 182 KLYQVLFAPEADYQGNNQWLLKDTQITDMADRVELAKSTVREYNWHTTLVPDKLAVVKVE 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + +S L + + Y +++TQ + L+++ R Sbjct: 242 PEELAMSGLYD-YVTYLKESEQDSSRYELALWRKVTQPFSIAVMMLMALSFVFGPL--RS 298 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL-FCISSIFLLMIKKKY 358 I + F + + + +I +L++++K Sbjct: 299 VSMGARILSGVVAGFTFYISSEFFGPLTLVYGIPPVFGAIMPSIVFLTIAILLLRRKL 356 >gi|254460215|ref|ZP_05073631.1| permease, YjgP/YjgQ family [Rhodobacterales bacterium HTCC2083] gi|206676804|gb|EDZ41291.1| permease, YjgP/YjgQ family [Rhodobacteraceae bacterium HTCC2083] Length = 365 Score = 107 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 39/356 (10%), Positives = 113/356 (31%), Gaps = 14/356 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y R R FL + L + +I +++++ S S + ++ ++ + P + Sbjct: 2 ILHFYFARRFFRVFLTTLLIFLAFLTLIDLVEQMRRFDSKDVSFSDIVFLTLFNAPGAIY 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + ++ ++ R +EL++ + G S + + + +A ++ I N I Sbjct: 62 QILPLVMILSAVSLFLTLARTSELVVTRSAGRSALVTLASPMCVAAVIGITTVTLFNPIV 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-------LYIKISKYNPNNTLQGIFI 175 L + + + L ++ + + F+ Sbjct: 122 ASTTRQYITLEQEYKSQKKNTVSIGRDGLWLRQGDENGQTVIHALSTSDDMRTLFDARFL 181 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ--TESA 233 + D+Q A + ++ + + + + + L Sbjct: 182 QYNTDSQPKTRIIADEARLTNTG-WQLIRAKHWSLDTSGNPEETAREIDVLMLPTTLTIE 240 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 N + ++ + + ++ + LF + L+ Sbjct: 241 NIRDSFSEPAAISIWEM-DAYIEGLEEAGFSTRRHKVWQQMEFARPLFLMAMVLVGASF- 298 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 R K + ++ + FG+++ ++ + +N ++ + I+SI Sbjct: 299 -TMRHTRFGKAGVAVLAAIMMGFGLYYVRNFAQ-ILGENGQLPTMIAAWTPPIASI 352 >gi|54298619|ref|YP_124988.1| hypothetical protein lpp2683 [Legionella pneumophila str. Paris] gi|53752404|emb|CAH13836.1| hypothetical protein lpp2683 [Legionella pneumophila str. Paris] Length = 359 Score = 107 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 45/369 (12%), Positives = 120/369 (32%), Gaps = 22/369 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + + + +V I Q +Q +N +S + +++K+ +P ++ Sbjct: 2 IIFRYLTKEVFLTLIALTAILVLIFMSNQFIQYLNRAASGSIPGFVIMKLLMLELPNLMG 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + + +E+ ++ G L+K +A ++ + + + Sbjct: 62 LLLPLGFYVALLLAYGRLYAESEMTVLRACGYGPKQLLKHSFAMATVVLVVVAVVMIWAS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +L + + F ++ I + + Q I ++ + Sbjct: 122 PVIAVERTKLIRSTGIKTLVQTIMPGRFHAINSGQQIFYVQSMNRDHSQAEQIFMAKHSV 181 Query: 183 THKIYY---------AQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 + + I+L +G+ ++ P D I +F SY + + Sbjct: 182 QDNRLLWDVLWADKAFAEVNPQTGEEYIVLQNGKEYQGVPGHADYQIAEFASYKSKLPNP 241 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + A L N +N +E R++ L + L+++ Sbjct: 242 TV-VMHDDARTAKTRDLWPLNNHNLKKA--------AELQWRISIPLMVLTLTLVAVPL- 291 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-PYYIPILYLFLFCISSIFLL 352 + + K + ++ I I + ++ ++ + +L Sbjct: 292 --SRVSPRSGKYSKLLPAIIIYIFYANFMFVSRDAIATGKIPWWIGMWWVHAAVAILGIL 349 Query: 353 MIKKKYTKI 361 I + K+ Sbjct: 350 FIWRNQVKL 358 >gi|66044344|ref|YP_234185.1| permease YjgP/YjgQ [Pseudomonas syringae pv. syringae B728a] gi|63255051|gb|AAY36147.1| permease YjgP/YjgQ [Pseudomonas syringae pv. syringae B728a] gi|330969233|gb|EGH69299.1| permease YjgP/YjgQ [Pseudomonas syringae pv. aceris str. M302273PT] Length = 353 Score = 107 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 47/355 (13%), Positives = 110/355 (30%), Gaps = 4/355 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + + L I+ + + + + + S T +L L P Sbjct: 1 MVKLDRYIGKSVLLAILAVLGIILGLVSLFAFIDEMGDI-SDTYTLADALSYVMLTAPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ ++EL I+ G S ++ V+ ++L I + Sbjct: 60 VYDTLPMAALIGCLIGLGTLASSSELTIMRAAGVSIGRIVWAVMKPMLVLMIAGVLVGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + AQ + L+ R D+ + L Sbjct: 120 VAPYAENQAQAARSLAQGSGDAQSARHGLWHRQGDEFIHINTVQPNGLMLGVTRYRFDDQ 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 +A+ + D L D + ++ + + + ST+++ Sbjct: 180 RHMQTSSFAKEANFKTD--YWELKDVTTTHFNDGRTEVINTPVERWDVALSPQLLSTVIM 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 ++S L + + Y F ++ Q V L++I Sbjct: 238 PPESLSISGL-WSYAHYLADQGLSNGRYWLAFWTKVLQPAVTVALVLMAISFIFGPLRSV 296 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + + +F + + P + +L C + LL+ + Sbjct: 297 TLGQRVFTGVVVGFTFRIIQDLLGPSSLLFGFPPLLAVLLPAAACALAGVLLLRR 351 >gi|224825294|ref|ZP_03698399.1| permease YjgP/YjgQ family protein [Lutiella nitroferrum 2002] gi|224602215|gb|EEG08393.1| permease YjgP/YjgQ family protein [Lutiella nitroferrum 2002] Length = 358 Score = 107 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 42/352 (11%), Positives = 115/352 (32%), Gaps = 2/352 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YI + + L + ++ + I++ + + + + +L L+P Sbjct: 1 MKLIYRYITTQLTVATLYALAALLALYAFFDIIKEVPDLGHGSYGVPQMLLYIALLMPGH 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + +T + ++E II +G + + +L I ++ + Sbjct: 61 AYELMPLVVLIGGMVAMTQLATSSEYTIIRTSGVTLAQVAGVLLRFGIGFAVITGLLGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P +++ A ++ ++ + D + N L +D Sbjct: 121 GAPFSEKQAERMKLSATKSMVTQEFHSGIWVKDDQNFINVGEMLPDNTLLGVRIYTYDKD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + +A+ G+ + L + + + + E + +++ Sbjct: 181 YRLVQTRFAERGTYQRPQHVWRLEKVKETTLGDKATTTRQLNTLDWHSVIEPSILDVLLV 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + L + + + Y + L + L+++ ++ Sbjct: 241 VPEQMSAMDLT-TYIEHLRSNEQKTQRYEIALWSKFFYPLACISMALVALAFTPRQRRHA 299 Query: 301 QRKKIHPIFISLSISF-GVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 Q + I L ++F V F+++ + N + L LF ++ I + Sbjct: 300 QLGIRLFVGICLGVAFHFVNRLFAHLGLLYDWNAMFAATLPTLLFLLAGITI 351 >gi|150024706|ref|YP_001295532.1| hypothetical protein FP0611 [Flavobacterium psychrophilum JIP02/86] gi|149771247|emb|CAL42716.1| Protein of unknown function [Flavobacterium psychrophilum JIP02/86] Length = 361 Score = 107 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 55/363 (15%), Positives = 124/363 (34%), Gaps = 9/363 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + YIL+ +FL+ L + I + I ++IN + + ++ +L I Sbjct: 2 LTILDKYILKRYLATFLVMLLLFIPIGITVDIAEKINKILENKVPIDKVLSYYVDFIIYF 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + NTE++ I ++G S ++P + A ++S F + Sbjct: 62 TNFLFPIFLFLSIIWFTAKLANNTEIIAILSSGISFSRFLRPYIIGATIVSFFALLMGFF 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + PK K + + E I N + + + Sbjct: 122 LAPKASEGFKNFRYLYLIGNGKDEMRETNDVYRQISETEFIYVSNFDIEAKTAYNFVFEK 181 Query: 181 TQTHKIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 K+ Y S + + L + ++ I K + + + Sbjct: 182 FNAEKLVYKISASSIQWNSKEKTYTLLNYSKRTVGALNDKIETENSKPMKFNFDLEDLTP 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +V A + + L + TY +++ + + I +I++ + Sbjct: 242 VVYIAETLSFTDLNKFIEKEKKRGSANINTYLVVKYRKYSIPISAFILTIIAVAV---SS 298 Query: 298 LVRQRKKIHPIFISLSISFGVFW---GFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + R+ + I ++I+F + F+ + K P + F+F I + +LL Sbjct: 299 MKRRGGMGMNLAIGIAIAFSYIFLDKIFATLAEKSSIEPIIAIWIPNFIFGILAFYLLRN 358 Query: 355 KKK 357 K+ Sbjct: 359 AKR 361 >gi|328954009|ref|YP_004371343.1| permease YjgP/YjgQ family protein [Desulfobacca acetoxidans DSM 11109] gi|328454333|gb|AEB10162.1| permease YjgP/YjgQ family protein [Desulfobacca acetoxidans DSM 11109] Length = 372 Score = 107 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 61/361 (16%), Positives = 122/361 (33%), Gaps = 6/361 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + LY+ R R+F ++ V I +I ++I+ + + +L+ G +P Sbjct: 16 RLLMLYVAREFCRNFFLTLAAFVGIYLIIDFFEKIDRLHRAQLGFVGILEYFGAKLPLAT 75 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 V P + + R+ E I G + L++P+L LA +L +FL + Sbjct: 76 GQVLPASVLLAVIITFGILARHNETTAIKCAGLNITILLRPILLLASVLVLFLLSLNLFL 135 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLF-FRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + + L + + + D IS++ + + D Sbjct: 136 TPWLTQRVNIIWETKVDKKPARELIDLKWLWYKGDRAIFHISEFRKDTKSMENVKIYVFD 195 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 Q H + + Q +DG + P + +S + + TE + Sbjct: 196 QQFHLTQFIAAQRAQWTGQNWRFSDGMIQTFLPQGEIVSEAFVERTMILTERPEDFVNLE 255 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + + + L Y E H R+ L P+I LI R Sbjct: 256 RRVTELNGYDLYRYIRRLERDGYDSRPYWVELHSRIAFALTPIIVTLIGGGLIFWRE--- 312 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF-CISSIFLLMIKKKYT 359 + I +++ F ++W S + Q + +L +L I + + K + Sbjct: 313 KGNISLGIVSGIALVF-IYWLLSTFFLSLGQVRFMPVLLAAWLANIIFGLGGFLALSKAS 371 Query: 360 K 360 + Sbjct: 372 R 372 >gi|156935579|ref|YP_001439495.1| hypothetical protein ESA_03443 [Cronobacter sakazakii ATCC BAA-894] gi|156533833|gb|ABU78659.1| hypothetical protein ESA_03443 [Cronobacter sakazakii ATCC BAA-894] Length = 360 Score = 107 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 49/357 (13%), Positives = 119/357 (33%), Gaps = 3/357 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI R I + +M+ +V ++ +I+ + ++ + + + +P + Sbjct: 5 SVLDRYIGRTIFNTIMMTLFMLVSLSGIIKFVDQLKKTGEGSYTALGAGTYTLLSVPKDI 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L + + +EL+++ +G +R+ + V+ AI L IF + Sbjct: 65 QIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVAASVMKTAIPLVIFTMAIGEWV 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + L A+ + ++ ++ + ++ N + Sbjct: 125 APQGEQMARNLRAQQMYGGSLLSTQQGMWAKDGNNFVYIERVKGENELGGISIYAFNDKR 184 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVL 240 + + YA + D + + L+ + +P S ++ + L Sbjct: 185 RLESVRYAANAKFDAEHKLWRLSQVDESNLKNPQQITGSQTLTGTWKTNLTPDKLGVVAL 244 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + ++S L N + Y+ ++ Q L + L+++ Sbjct: 245 DPDALSISGLRN-YVKYLKASGQDASRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSV 303 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P I L L I L ++ K+ Sbjct: 304 PMGVRVVTGISFGFIFYVLDQIFGPLSLVYGIPPIIGAL-LPSASFFLISLWLLMKR 359 >gi|149378263|ref|ZP_01895975.1| predicted Permease [Marinobacter algicola DG893] gi|149357460|gb|EDM45970.1| predicted Permease [Marinobacter algicola DG893] Length = 353 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 45/355 (12%), Positives = 114/355 (32%), Gaps = 4/355 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + Y++ +G + + L ++ + + + ++ + ++L LL +P Sbjct: 1 MRKIDRYVMSTVGGAMFLVMLVVLSLDLIFAFIAELDDAENDYQTLQALL-YVVMTLPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P M L +M ++EL +I G S ++ + +++ + + Sbjct: 60 IYDYLPLGAFMGCLVGLGTMASSSELTVIRAAGVSLKRIVWSAMKPTLVVVVLGVLIGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + Q S + + + D+++ ++ PN L G+ + D Sbjct: 120 VAPPA-ERMAQSQKTVAQGAGESIASASGIWHREGDVFMHLNAVQPNGVLHGVSLFRFDD 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + I +L + R S + + + S +++ Sbjct: 179 ERWLVSASFAERGIYQGDH-WLLENVATTRLSDEKTTQETHRALRWETGLSPSVLSVLIV 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K D +S L + + Y F K++ L + L++I Sbjct: 238 KPEDLAISGLY-TYASYLGEQGLNAANYWLAFWKKVLMPLGTAVMVLVAISFVFGPLRSV 296 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + + F + + + I+ +LM + Sbjct: 297 TMGFRVFTGLIVGLLFKYMQDLLGPMSLVFGFNPVLAIILPIAINAVVGAVLMKR 351 >gi|145300688|ref|YP_001143529.1| permease [Aeromonas salmonicida subsp. salmonicida A449] gi|142853460|gb|ABO91781.1| predicted permease [Aeromonas salmonicida subsp. salmonicida A449] Length = 356 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 48/355 (13%), Positives = 113/355 (31%), Gaps = 2/355 (0%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + YI R I S L+ L +V +A +I+ ++++ V + L +P Sbjct: 4 ILDRYIGRVIFMSILLCELTLVGLAALIKYVEQLKSVGEGNYDMINALYYVLLSMPKEAV 63 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + L + ++EL+++ G S+I+++ L AI L I + + + Sbjct: 64 QFFPLAALLGGLIGLGQLATSSELVVMQAAGRSKISIVMAALKTAIPLMILVGLMGEYVA 123 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + L+ + + D + ++ I+ + L GI + + Sbjct: 124 PIA-KRMADDVKAGALSEGRLTVSAYGVWARDGNNFVNINGVRNDGALTGITLYRFTPER 182 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + ++ P ++ + + + Sbjct: 183 KLIDILQAREGVFEQHHWLLKQVQITRFDDPAQILSETQAQMEWSSELTPKQLGVVSIDP 242 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++ LL+ + + Y+ E ++L L V L++ Sbjct: 243 ENLPVAGLLD-YIGYLDANKQDAGRYKLEMWRKLLSPLSVVAMILLASSFIFGPLRSVSM 301 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + I + V I + P + + L F ++ +K+ Sbjct: 302 GARMLMGIMTGFAVYVSDRVFGPISLVYAVPPILAAIAPSLLFGGISFYILSRKQ 356 >gi|237729200|ref|ZP_04559681.1| conserved hypothetical protein [Citrobacter sp. 30_2] gi|226908929|gb|EEH94847.1| conserved hypothetical protein [Citrobacter sp. 30_2] Length = 360 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 46/354 (12%), Positives = 112/354 (31%), Gaps = 2/354 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ + ++ + + P + + Sbjct: 7 LDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDAMGAGLYTLLSAPKDIQI 66 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 67 FFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAP 126 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+ + ++ L+ + D + + Sbjct: 127 QGEQMARNYRAQQMYGGSLLSTQQGLWAKDGDSFVYIERVKGDAELGGISIYSFNDKRRL 186 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + YA S + D +++ L+ + P S ++ + L Sbjct: 187 QSVRYAASATFDPEQKVWRLSQVDESNLTDPKQITGSQTVSGTWKTNLTPDKLGVVALDP 246 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S L N + Y+ ++ Q L + L+++ Sbjct: 247 DALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKVFQPLSVAVMMLMALSFIFGPLRSVPM 305 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 IS F V + + P I L LM++K Sbjct: 306 GVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLMLRK 359 >gi|224586303|ref|YP_002640102.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224470831|gb|ACN48661.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 360 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 46/354 (12%), Positives = 115/354 (32%), Gaps = 2/354 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ + ++ + +P + + Sbjct: 7 LDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGNYDALGAGMYTLLSVPKDIQI 66 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 67 FFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAP 126 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+A + ++ L+ + ++ V + + Sbjct: 127 QGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELAGISIYVFNDQRRL 186 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + YA S D + + L+ + +P S ++ + L + Sbjct: 187 QSVRYAASAKFDPEHKVWRLSQVDESDLQNPKQITGSQTVSGTWKTNLTPDKLGVVALDS 246 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S L N + Y+ ++ Q L + L+++ Sbjct: 247 DALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPM 305 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 IS F V + + P + L LM++K Sbjct: 306 GVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIVGALLPSASFFLISLWLMLRK 359 >gi|148358635|ref|YP_001249842.1| permease [Legionella pneumophila str. Corby] gi|296108275|ref|YP_003619976.1| Predicted permease [Legionella pneumophila 2300/99 Alcoy] gi|148280408|gb|ABQ54496.1| permease [Legionella pneumophila str. Corby] gi|295650177|gb|ADG26024.1| Predicted permease [Legionella pneumophila 2300/99 Alcoy] Length = 359 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 45/369 (12%), Positives = 120/369 (32%), Gaps = 22/369 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + + + +V I Q +Q +N +S + +++K+ +P ++ Sbjct: 2 IIFRYLTKEVFLTLIALTAILVLIFMSNQFIQYLNRAASGSIPGFVIMKLLMLELPNLMG 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + + +E+ ++ G L+K +A ++ + + I Sbjct: 62 LLLPLGFYVALLLAYGRLYAESEMTVLRACGYGPRQLLKHSFAMATVVLVVVAIVMIWAS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +L + + F ++ I + + Q I ++ + Sbjct: 122 PVIAVERTKLIRSTGIKTLIQTIMPGRFHAINSGQQIFYVQSMNRDHSQAEQIFMAKHSV 181 Query: 183 THKIYY---------AQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 + + I+L +G+ ++ P D I +F SY + + Sbjct: 182 QDNKLLWDVLWADKAFAEVNPQTGEEYIVLQNGKEYQGVPGHADYQIAEFASYKSKLPNP 241 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + A L N ++ +E R++ L + L+++ Sbjct: 242 TV-VMNDDARTAKTRDLWPLNNHDLKKA--------AELQWRISIPLMVLTLTLVAVPL- 291 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-PYYIPILYLFLFCISSIFLL 352 + + K + ++ I I + ++ ++ + +L Sbjct: 292 --SRVSPRSGKYSKLLPAIIIYIFYANFMFVSRDAIATGKIPWWIGMWWVHVAVAILGIL 349 Query: 353 MIKKKYTKI 361 I + K+ Sbjct: 350 FIWRNQVKL 358 >gi|90021021|ref|YP_526848.1| SecD export membrane protein [Saccharophagus degradans 2-40] gi|89950621|gb|ABD80636.1| permease YjgP/YjgQ [Saccharophagus degradans 2-40] Length = 352 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 43/356 (12%), Positives = 108/356 (30%), Gaps = 5/356 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI I + L I+ + + ++ +++ +S + + + IP+ Sbjct: 1 MTKLKRYIGHTIAAAVATVLLVILSLDAISDLVDQLSNLSGD-YTFSEAIIFVLLYIPSS 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 P + L + ++EL+++ G S + L+ V+ + + Sbjct: 60 AYDYLPLSALVGCLIGLGVLASSSELVVMRAAGVSVLQLVWAVMRPVCVFIGVGVLVGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P A A+ E ++ R ++ + + Sbjct: 120 VAPYSDQYADSRRALAKGHDRALQAERGVWNREGNEYMHFNAVLPNGKLYGITRYIFDEK 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 Q + + S + DGEV + + + + + +VL Sbjct: 180 GQLLEASFVDSAIYQ--GEFWFEQDGEVTSFEDGRIEKFGFATREWRTEVSPDLLNVLVL 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 A++ + L + + + Y+ F + Q L +I+I Sbjct: 238 DADELPMKRLYD-YSTYLDKQGLDSSEYKLAFWHKAFQPLAVASLVMIAISFILGPLRQT 296 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 I + + + F I +L + + + + +I++ Sbjct: 297 TMGFRVFIGVIVGLVFQTSQKMLGPASIIMGFSPMFAVL-IPIVVCLVLGVFLIRR 351 >gi|172036161|ref|YP_001802662.1| putative permease YjgP/YjgQ [Cyanothece sp. ATCC 51142] gi|171697615|gb|ACB50596.1| putative permease YjgP/YjgQ [Cyanothece sp. ATCC 51142] Length = 401 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 43/373 (11%), Positives = 122/373 (32%), Gaps = 20/373 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRI-NLVSSSTESLNILLKISGYLIPT 59 + + Y+ + L S + + I L + + V S L +I +P Sbjct: 28 LSLMDRYLASQLIGPLLFSVGLVSVLGVAIGYLSDLADKVVDSNLPLIQASEILLLKVPE 87 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 P + T ++ ++EL+ G S LI P + ++++++ F+ Sbjct: 88 FTAYALPISVMLSTLLTYGRLSNDSELIAFRGCGVSLYRLIVPAVVMSLVVTGVTFLVSE 147 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI------------KISKYNPN 167 ++ P + + + +++F+ + + + ++ Sbjct: 148 LVVPAANYRATAILVEYLQEEHPYWQNKDIFYPDYEQVVLPNGEKEKRLKHLFFAEQFDG 207 Query: 168 NTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 L+ + +++ + + ++I + S + + + DG +++ +P + F+ Sbjct: 208 QNLKTLTVLEWLEERLNRIVVSDSATWNGQEETWDFFDGTIYQLAPDASYKEAYPFEHRQ 267 Query: 228 LQTESA--NSSTIVLKANDQNLSFLLNPNPNNPNYRP-ELLETYRSEFHKRLTQWLFPVI 284 L A + + N+ + L ++ ++L V+ Sbjct: 268 LPLTKAAFEFALQGRDPYEMNIIQARQYMKILKMMGDDKKLRMFQVRIQQKLAFPFICVV 327 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL-YLFL 343 FG++ Q + +S+ I F + I + +L Sbjct: 328 FGVVGSALGSMPQ---QMSRATGFGLSVVIIFSYYLLGFLIGSLGLMGLISPVLAGWLPN 384 Query: 344 FCISSIFLLMIKK 356 ++ ++ + Sbjct: 385 ILGLAMGGWLLYR 397 >gi|253991456|ref|YP_003042812.1| hypothetical protein PAU_03983 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782906|emb|CAQ86071.1| similar to putative membrane protein yjgq of escherichia coli [Photorhabdus asymbiotica] Length = 358 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 48/355 (13%), Positives = 119/355 (33%), Gaps = 2/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI R I ++ LM+ +V ++ +I+ + ++ V + + +P + + Sbjct: 5 LDRYIGRTILQTILMTLFMLVSLSGIIKFVDQLRKVGQGEYTTISAGLYALLSVPKDIQI 64 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L ++ +EL+++ +G +R+ + V+ AI L I I + P Sbjct: 65 FFPMAALLGALLGLGALATRSELVVMQASGFTRMQVAGSVMKTAIPLVILTMIIGEWVAP 124 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+ + + ++ + D + + D + Sbjct: 125 QGEQMARNYRAQKMFGGSLVSTTKGMWAKDGADFIYIQRVMSDTEIKGVNIYHFNDDKKL 184 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK-SYTLQTESANSSTIVLKA 242 + YA S D + L+ E + K + + + + L Sbjct: 185 LSVKYADSAVYDENNDLWKLSQVEESDLTDSKKITGSQRISADWKTRLTPEQLGVVALDP 244 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 ++S L + + Y+ K++ L + L+++ Sbjct: 245 EALSISGLYQ-YISYLKQSEQESGRYQLNMWKKIFAPLSVAVMMLMALSFIFGPLRTVPM 303 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I+L F + + + P + L L ++ L++K++ Sbjct: 304 GVRIITGITLGFLFYLLNEIFGPLSLVYSMPAVLAALLPSLLFLTLSIYLLLKRQ 358 >gi|317494175|ref|ZP_07952591.1| inner membrane protein yjgQ [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917948|gb|EFV39291.1| inner membrane protein yjgQ [Enterobacteriaceae bacterium 9_2_54FAA] Length = 356 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 44/356 (12%), Positives = 115/356 (32%), Gaps = 2/356 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + YI R I + + + +V ++ +I+ + ++ V S + +P Sbjct: 2 LGVLDRYIGRTIFSTIMATLFMLVSLSGIIKFVDQLRKVGQGDYSAAGAGLYTLLSVPKD 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + L + + +EL+++ G +R+ + V+ AI L I Sbjct: 62 IEVFFPMAALLGALLGLGMLAQRSELVVMQAAGYTRMQIASSVMKTAIPLVILTMAIGEW 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ + A+ Q+ + + D +I I + ++QG+ I + Sbjct: 122 VAPQGEQAARNYRAQ-QMYGGSLLSTQTGLWAKDGTDFIFIQRVTGEKSIQGVSIYSFDN 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + + + Q + E + S + + + Sbjct: 181 ERHLQKLRYANSATFEGHQWKLSQVEESNLTDSKRITGSQTLNGVWKTNLTPDKLGVVAM 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + ++S L + + Y+ ++ L + L+++ Sbjct: 241 SPDSLSISGLYH-YVKYLKQSGQESSRYQLNMWSKIFAPLSVAVMMLMALSFIFGPLRSV 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 IS F V + + P + + L + ++++K Sbjct: 300 PMGVRVLTGISFGFFFYVLDEIFGPLSLVYSVPPVLGAILPSLLFLLISVYMLLRK 355 >gi|153834578|ref|ZP_01987245.1| inner membrane protein YjgP [Vibrio harveyi HY01] gi|148869021|gb|EDL68066.1| inner membrane protein YjgP [Vibrio harveyi HY01] Length = 366 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 44/357 (12%), Positives = 121/357 (33%), Gaps = 19/357 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + + + S ++ + G +P + Sbjct: 2 IIVRYLIRETLKSQFAIFFVLFLVFLSQKFISVLADASDGDIPAGLIFSVVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+++++ TG L++ L+LAI+ S + + Sbjct: 62 LMLPLSLYIGILITFGRLYAESEIVVMNATGIGNKFLVQAALYLAIITSGVAAFNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + ++QL + + L++ F D + ++TL +F+ R Sbjct: 122 PWSQDRVEQLYEQVAAENSVDLLKKGQFQGTPDGSSVVFIDDIKDSTLSNVFVAQMRPRD 181 Query: 183 THK-----IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + + RQ I +++G + P + I KF Y Sbjct: 182 SILPSVMFSSSGEVKELSDGRQIITMHEGTRYEGVPTRVEYMITKFDQYEGLIGQREVKQ 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L+ ++E R++ + V L++++ A Sbjct: 242 KGRDWEAYPTADLI----------GHPDPEAQAELQWRISLF---VCIPLLTMLVIPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + ++ + + ++ I F S + ++ + ++ + + ++ Sbjct: 289 VNPRQGRFAKMGPAILIYLAYFLAISATKSAL-EDGAIPAAIGMWPINAMLLIVAIL 344 >gi|332665471|ref|YP_004448259.1| permease YjgP/YjgQ family protein [Haliscomenobacter hydrossis DSM 1100] gi|332334285|gb|AEE51386.1| permease YjgP/YjgQ family protein [Haliscomenobacter hydrossis DSM 1100] Length = 365 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 53/357 (14%), Positives = 116/357 (32%), Gaps = 6/357 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPTV 60 K + YI++ +F + L + IA ++ +++ + I+L+ + + Sbjct: 6 KILDWYIIKKFLSTFFFTVLIFLMIAVILDFSEKVEKFIEEPITTREIVLQYYPSFMLWI 65 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + C + + M ++E++ I N G S L++ F A L++ + + Sbjct: 66 GGQLWSVCTLIAVIFFTSRMAYSSEIMSIFNAGVSFNRLMRSYFFGAAFLTLLYLLCTHY 125 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF-IVDSR 179 I P + + K N+ + + + I Y +++ F I + Sbjct: 126 IMPVGEKYRQDIVHKYIDKSDDKGKTTNIHLFVAPNTKVFIGFYRKDDSTARDFRIEHFK 185 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIM--KFKSYTLQTESANSST 237 + Q A + + L D H + + +D+ + + K TL + Sbjct: 186 NQQLVSYTKADRAEYLPETRKWRLWDYSSHSFNGLKEDLKMHLAESKDTTLSLYPEDFVD 245 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + L+ Y E ++R + I I + A Sbjct: 246 YSSQQSMMTTPRLMKYIRQQNERGASNTRKYLFELYRRTADPVTIFILTFIGMAIA--SR 303 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 VR H + VF + + Q +L + + L +I Sbjct: 304 KVRGGFGFHLALGIGVGAIFVFLSKFTNVFALGQTIPVWLGAWLPNLVFAFVALRLI 360 >gi|82701536|ref|YP_411102.1| permease YjgP/YjgQ [Nitrosospira multiformis ATCC 25196] gi|82409601|gb|ABB73710.1| permease YjgP/YjgQ [Nitrosospira multiformis ATCC 25196] Length = 358 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 56/366 (15%), Positives = 131/366 (35%), Gaps = 17/366 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI R + F++ + + + + + + + + L +L++ Sbjct: 1 MKIIERYITRELLIPFMVVTVILATLFASFSMARFLAGAVTDSLGLIPVLRLVFLKTLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + L ++R+ E++++ + G S +I VL +AI + + + Sbjct: 61 LEVLMPIALYVAVIMGLGRLHRDQEIVVLRSAGVSEHRIIYAVLIVAIPMGLISGLFSIF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNTLQGIFIVDSR 179 P L+A+A+ L F+ + I + + + G Sbjct: 121 ARPWAYEESYLLNAQAEAELNTDRFRAGRFYGSEKKGRVIYVQAKDSSGKQMGEVFHYLN 180 Query: 180 DTQTHKIYYAQSGS----IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + +I A+ + R I L DG ++R S K ++++F+ T+S N Sbjct: 181 KHDSSEIILAKKAHQPELVFGQRPQIHLLDGSIYRLSHTGKGDTVVQFEKLVYFTDSGNV 240 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + KA + +E RL++ L ++ LI++ + Sbjct: 241 TDYRRKA------------ASTAALMQSDQPRDTAELQWRLSRPLATILLALIAVPFSRA 288 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + K + + + + + G + + + +L+ + L+ Sbjct: 289 SPRQTKGDKTYYLAALVFAIYYILSGLAQTWVEQGTIGRVPGVWWLYAVMLLFAISLLSP 348 Query: 356 KKYTKI 361 + K+ Sbjct: 349 GFWRKL 354 >gi|56697305|ref|YP_167671.1| YjgP/YjgQ family permease [Ruegeria pomeroyi DSS-3] gi|56679042|gb|AAV95708.1| permease, YjgP/YjgQ family [Ruegeria pomeroyi DSS-3] Length = 365 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 40/358 (11%), Positives = 112/358 (31%), Gaps = 10/358 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y R +SFL+ L + + +I +++++ S+ L+ ++ P + Sbjct: 2 ILDRYFARRFIQSFLVIGLVFLGLVLLIDLIEQLRRFEGFEVSMGQLVGLTLLNAPAAIS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + T + + R++EL++ G S I + + +A+++ + + N I Sbjct: 62 EILPLLMILSTIVLFVGLARSSELVVTRAIGRSGIRALVGPVLVALVIGLLAVTTLNPIV 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFR------LDDDLYIKISKYNPNNTLQGIFIV 176 + L+ + + + TL + I+ Sbjct: 122 AATAVRYQTLADTYRNGGPSVLSLSDEGLWLRQGDAGGQSVIHATGFGGDGVTLFDVTIL 181 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + D + ++ K + + + + + T Sbjct: 182 SYAPDGSAQRRTIAESAQLQDGKWLLQKAKVWPLKVGQNPEANAVYHDRIEMPTSLTQER 241 Query: 237 TIVL-KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + + L + ++ L + LF V L+ Sbjct: 242 IRDSLGRRETVSIYDLPQTIEQLQQAGFSTKRHKVWLQVELARPLFLVSMVLVGAAF--T 299 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 R + ++ + F +++ ++ + +N L + +++I L Sbjct: 300 MRHTRFGGTGLAVLSAVLLGFTLYFTRNFAQ-ILGENGQIPVALAAWAPPVAAIMLTF 356 >gi|146297810|ref|YP_001192401.1| permease YjgP/YjgQ family protein [Flavobacterium johnsoniae UW101] gi|146152228|gb|ABQ03082.1| permease YjgP/YjgQ family protein [Flavobacterium johnsoniae UW101] Length = 362 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 56/364 (15%), Positives = 123/364 (33%), Gaps = 10/364 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + YIL+ +F + L + I VI + +++N + + + Sbjct: 2 LTIIDKYILKRYLATFSVMILLFIPIGIVIDVSEKVNKMLENKIPFTQIAIYYYNFTVYF 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + + NTE++ I ++G S ++P + A ++S+F+ + Sbjct: 62 ANSLFPIFLFLSVIWFTSKLANNTEIIAILSSGISFTRFLRPYIIGASIVSVFVLLMGFF 121 Query: 121 IEPK----CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 I P + L D D S + T + Sbjct: 122 IVPAASEGFNNFRYTYLKGNGKQLMRGENTNVFRQINDHDFIFVNSFNEESKTAFNFTLE 181 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + A D ++ L D ++ I K+ + E A+ + Sbjct: 182 HFEKEKLTYKITASRIKWDPKKKIYTLYDYTKRTVGDLNDVIEKAPEKNVGFKFELADLT 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 +V A L L++ + TY +K+ + + I +I++ Sbjct: 242 PVVYIAETLTLGKLIDFIEKERKRGSGNINTYLVVLYKKYSVPVSAFILTIIAVAV---S 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFW---GFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 ++ R+ + I ++I+F + F + K +P +F I +++LL Sbjct: 299 SMKRRGGMGMNLAIGIAIAFSFVFFDKIFGTLAEKSTFSPLLAVWFPNIVFGILAVYLLR 358 Query: 354 IKKK 357 K+ Sbjct: 359 NAKR 362 >gi|170077642|ref|YP_001734280.1| YjgP/YjgQ permease superfamily [Synechococcus sp. PCC 7002] gi|169885311|gb|ACA99024.1| putative permease, YjgP/YjgQ family superfamily [Synechococcus sp. PCC 7002] Length = 378 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 52/364 (14%), Positives = 133/364 (36%), Gaps = 19/364 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQ-ILQRINLVSSSTESLNILLKISGYLIPTV 60 + YI+ + FL + I + + + V ++ + I +I +P Sbjct: 9 SLLDRYIMAQLVGPFLFGLGIFTSLGLTIGVLFEVMRNVVANEITWAIAFQILALRLPEF 68 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + T +S++ +E++ + + G + L+ P L L +L++ F + Sbjct: 69 LVLGLPMATLLGTLTAYSSLSSFSEIIALRSVGLPPLRLMLPGLLLGLLITGITFGLNDW 128 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-----------YIKISKYNPNNT 169 I P+ ++ AQ T Y E+N+ + + + ++ Sbjct: 129 IVPQTTKQASTIANIAQGEATIDYQEKNIIYPEYQRVKTATGNREILKTLFYAETFDGTQ 188 Query: 170 LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ 229 + + I+D T +I A + + + Q ++ DG +++ I +F++ L Sbjct: 189 MNNLTILDRAAVDTQRIITAAAAQWNANEQGWLVQDGSIYQIGANGSFSDIEQFETNFLN 248 Query: 230 TESANS--STIVLKANDQNLSFLLNPNPN-NPNYRPELLETYRSEFHKRLTQWLFPVIFG 286 A +T + N+ L + + + + T + ++ + ++F Sbjct: 249 LSDAPLILATRCQRPNEMTLQVIDVCLESLKLSRNERRIRTLQVRKQEKFSVPFVCIVFA 308 Query: 287 LISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCI 346 ++ + + + +S++I F ++ S I + P + + + Sbjct: 309 MVGSAIGLRPQNS---SRATSVGLSVAIVFA-YYLISVISSSMGVWGTITPFMGTWFPNL 364 Query: 347 SSIF 350 + Sbjct: 365 LGLV 368 >gi|283834897|ref|ZP_06354638.1| membrane protein, YjgP/YjgQ family [Citrobacter youngae ATCC 29220] gi|291069157|gb|EFE07266.1| membrane protein, YjgP/YjgQ family [Citrobacter youngae ATCC 29220] Length = 360 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 46/354 (12%), Positives = 112/354 (31%), Gaps = 2/354 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ + ++ + + P + + Sbjct: 7 LDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDAMGAGLYTLLSAPKDIQI 66 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 67 FFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAP 126 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+ + ++ L+ + D + + Sbjct: 127 QGEQMARNYRAQQMYGGSLLSTQQGLWAKDGDSFVYIERVKGDAELGGISIYSFNDKRRL 186 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + YA S + D +++ L+ + P S ++ + L Sbjct: 187 QSVRYAASATFDPEQKIWRLSQVDESNLQDPKQITGSQTVSGTWKTNLTPDKLGVVALDP 246 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S L N + Y+ ++ Q L + L+++ Sbjct: 247 DALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKVFQPLSVAVMMLMALSFIFGPLRSVPM 305 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 IS F V + + P I L LM++K Sbjct: 306 GVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLMLRK 359 >gi|187734829|ref|YP_001876941.1| permease YjgP/YjgQ family protein [Akkermansia muciniphila ATCC BAA-835] gi|187424881|gb|ACD04160.1| permease YjgP/YjgQ family protein [Akkermansia muciniphila ATCC BAA-835] Length = 363 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 61/364 (16%), Positives = 128/364 (35%), Gaps = 8/364 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRIN-LVSSSTESLNILLKISGYLIPT 59 MK + YI R + + + + + + + + + L+ + ++I+L+ +IP Sbjct: 1 MKILDRYIARQLLGVTALGVMALSALLLLGNLFKELRPLLVENKAPISIVLEFIFQVIPF 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 L P+ F V + + EL + +G S L P + + I LS + Sbjct: 61 SLMFSIPWGFLTAVLLVYGRLASDNELTSMRMSGMSLWRLSAPAIAIGIALSGLCYWINI 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 I P+ + +I +L KA L E D+L I I K + + Sbjct: 121 DIAPRAKQSISELLIKAASINPKGLLNEGQAITKFDNLEIYIDKRVDDVIHGMHIYQKAD 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEV---HRKSPISKDISIMKFKSYTLQTESANSS 236 D +++ ++D + IL + + L S Sbjct: 181 DKSPSVAMHSERVTMDFSPEKKILTLHLINPLITTQEEGSISQSVTMDEMPLSINLDKSR 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + +KAN + + + +E +R + L ++F LI + A Sbjct: 241 SRRIKANRFTNREIREALDTPGYLDKKQTTEFATELPRRASFSLACIVFALIGVPLAIN- 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R++ + + I+ +++ +N +P + L+L I ++ + + Sbjct: 300 --TRRKDTSTGFALGILIA-SLYFLALIFADLSRKNDTMLPYILLWLPNIITVAVALHLH 356 Query: 357 KYTK 360 K K Sbjct: 357 KRAK 360 >gi|74316599|ref|YP_314339.1| hypothetical protein Tbd_0581 [Thiobacillus denitrificans ATCC 25259] gi|74056094|gb|AAZ96534.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC 25259] Length = 359 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 44/359 (12%), Positives = 122/359 (33%), Gaps = 14/359 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + + R +G + ++ IA VI ++ + V+ + + G+ + LP Sbjct: 2 LYRRALTREMGLATGAVLTVLIAIALVILFIRLLGDVARGELANEAVFAFLGFSLLYFLP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ L+ M R++E++I N G S ++PVL A+ LS+ + + ++ Sbjct: 62 VLMTISLFAGVLMPLSRMWRDSEMVIWFNAGLSLAQWLRPVLAFAVPLSLVILLLTLVLN 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ + + + LF + + T + Sbjct: 122 PWLQAKKNDYRQDLKARSESALIAPGLFAESGAGERVYYVESLNPLTGIVRNVFMQSRID 181 Query: 183 THKIYYAQSG----SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + ++ G + +P + D +++F+ Y ++ + + Sbjct: 182 GQLGLVVAREGDHTELPDGSRYLVFRQGRRYEGTPGTLDYRVVEFERYWMRLDPVATGGR 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 ++ LL + R+E RL L ++ +++I + Sbjct: 242 DTNIRQKSAGDLL----------ADPAPAARAELLWRLGVPLSALVLAVMAIPLSFVNTR 291 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 R+ + + + + + + +P+ + +++ L ++ + Sbjct: 292 ARRSYGLVTALLLYFVYNNLLSLTQAWVAQGRFDPWAGMASAHLVMLLAAAGLFYLRSR 350 >gi|238897462|ref|YP_002923139.1| putative permease [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465217|gb|ACQ66991.1| putative permease [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 367 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 47/352 (13%), Positives = 118/352 (33%), Gaps = 3/352 (0%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + YI R I + +M+ +V ++ +I+ ++++ V S+ + +P + Sbjct: 5 ILDRYIGRSILNTIIMTLFMLVSLSGIIKFIEQLRKVGEGNYSVFAAAIYTLLSVPNDIM 64 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + L ++ +EL+++ +G S + ++ V+ AI+L + I + Sbjct: 65 IFFPMAALIGGILGLGALATRSELVVVQASGFSHMQIVLSVMKTAIILFLLSIIIGEWLA 124 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P T K + ++ + D +I I++ ++ L G+ I Sbjct: 125 PLADQTASHYRTKM-IYGGSVISTQSGIWAKDKSDFIYINQVINHHELSGVHIYHFDAHD 183 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + +I + E + S + + + + Sbjct: 184 RLISIRYAATAIFEKGAWQLSQIDESNLSDTKKIQGSQTLSEKWETSLTPYKLGIVAMDP 243 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++ L + + + Y + +++ + L+S+ Sbjct: 244 DSLSIMGLYD-YVKYLKQVGQDSDRYELKMWQKIFSPFSITVMILLSLSFIFGPLRSTAT 302 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQ-NPYYIPILYLFLFCISSIFLLM 353 I F + + + Q +P L LF S++LL+ Sbjct: 303 GLRIVTGICFGFVFYLLDKIFGPLSLLYQFSPILGAALPSVLFFSISLYLLL 354 >gi|153801086|ref|ZP_01955672.1| membrane protein, putative [Vibrio cholerae MZO-3] gi|124123319|gb|EAY42062.1| membrane protein, putative [Vibrio cholerae MZO-3] Length = 354 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 52/347 (14%), Positives = 114/347 (32%), Gaps = 19/347 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + ++ + S +++L I G +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASDGEIPTSMILSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LA++ + + + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + L + + L++ F R D + N L +F+ Sbjct: 122 PWSQDKEAHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLYNVFVAQLAPRD 181 Query: 183 THK-----IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + + RQ I L DG + P D I F SY + Sbjct: 182 SILPSVMFSHSGDVKELSDGRQIITLYDGTRYEGVPTRVDYMITNFDSYDGLIGQREVKS 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 LLN ++E R++ V L++++ A Sbjct: 242 AERDWEALPTLSLLN----------NADRRAQAELQWRISL---VVCIPLLTMLVVPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 + ++ + + ++ I F S I ++ I+ L+ Sbjct: 289 VNPRQGRFAKMGPAILIYLTYFLALSATKSAI-EDGSLPVIIGLWPI 334 >gi|262166531|ref|ZP_06034268.1| predicted permease [Vibrio mimicus VM223] gi|262026247|gb|EEY44915.1| predicted permease [Vibrio mimicus VM223] Length = 366 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 52/357 (14%), Positives = 117/357 (32%), Gaps = 19/357 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + ++ + S +++L I G +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASDGEIPTSMILSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LA++ + + + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASIAAFNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + QL + + L++ F R D + N L +F+ Sbjct: 122 PWSQDKEAQLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLHNVFVAQLAPRD 181 Query: 183 THK-----IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + RQ I L +G + P D I F SY + Sbjct: 182 SILPSVMFSNSGDVKELSDGRQIITLYNGTRYEGVPTRVDYMITNFDSYDGLIGQREVKS 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 LL ++E RL+ V L++++ A Sbjct: 242 SGRDWEALPTLSLL----------KNSDLQAQAELQWRLSL---VVCIPLLTMLVVPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + ++ + + ++ I F S I ++ I+ L+ + + ++ Sbjct: 289 VNPRQGRFAKMGPAILIYLTYFLALSATKSAI-EDGSLPVIVGLWPVNAALLIAALV 344 >gi|237740743|ref|ZP_04571224.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31] gi|229422760|gb|EEO37807.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31] Length = 359 Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 58/352 (16%), Positives = 116/352 (32%), Gaps = 1/352 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YIL + +++ FI + ++ + + S+ +L++ + IP + Sbjct: 1 MKIINKYILDELKGPIILAVFVFTFIFLLDIVVTMMEHIIVKGISVFDVLRLLSFYIPPI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + T +RN+E + + +TG S ++KP+L +AI +IF+ + Sbjct: 61 LTQTIPIGMFLGIMICFTKFSRNSESVAMVSTGMSIRAILKPILAIAIGAAIFIVFLQES 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P+ +K + K L+E F D I + K + + I + Sbjct: 121 IIPRSFIKLKYVGTKIAYENPVFQLKEKTFIDNLDQYSIYVDKVESDGKAKNIIAFEKPQ 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 +T +I+L + K F + + L Sbjct: 181 DKTKFPMVLTGEEAFWKDNSIVLKQSQFISFDENGKKNLTGTFDEKRVVLTPY-FENLNL 239 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K D + + N E + Y+ E ++L V +I + + Sbjct: 240 KIKDVEALSITDLIKNIRKVDAEEVLKYKIEIFRKLALIFSTVPLAVIGFCLSLGHHRIS 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 ++ I + + + +P+ L I L Sbjct: 300 KKYSFVLAMIIIFAYIIFLNIGIVMASAGKLHPFIATWTPNVLLYILGYKLY 351 >gi|327484988|gb|AEA79395.1| Predicted permease [Vibrio cholerae LMA3894-4] Length = 366 Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 51/347 (14%), Positives = 114/347 (32%), Gaps = 19/347 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + ++ + S +++L I G +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASDGEIPTSMILSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LA++ + + + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + L + + L++ F R D + N L +F+ Sbjct: 122 PWSQDKEAHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLYNVFVAQLAPRD 181 Query: 183 THK-----IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + + RQ I L +G + P D I F SY + Sbjct: 182 SILPSVMFSHSGDVKELSDGRQIITLYEGTRYEGVPTRVDYMITNFDSYDGLIGQREVKS 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 LLN ++E R++ V L++++ A Sbjct: 242 AERDWEALPTLSLLN----------NADRRAQAELQWRISL---VVCIPLLTMLVVPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 + ++ + + ++ I F S I ++ I+ L+ Sbjct: 289 VNPRQGRFAKMGPAILIYLTYFLALSATKSAI-EDGSLPVIIGLWPI 334 >gi|254510403|ref|ZP_05122470.1| permease, YjgP/YjgQ family [Rhodobacteraceae bacterium KLH11] gi|221534114|gb|EEE37102.1| permease, YjgP/YjgQ family [Rhodobacteraceae bacterium KLH11] Length = 382 Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 47/355 (13%), Positives = 117/355 (32%), Gaps = 11/355 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y R +SFL+ + + +I +++++ S S LL+++ P + Sbjct: 18 ILDRYFARRFVQSFLVIGGIFLTLMILIDLIEQVRRFDSVDLSFGQLLQLTLLNTPAAIS 77 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + T + + R++EL++ G S I + +F+A+++ F N I Sbjct: 78 EMLPLLMILATIALFVGLARSSELVVTRAIGRSGIRALLAPVFIALMIGGFAVALLNPIA 137 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTL-------QGIFI 175 ++L+ + + + L S + T+ + I Sbjct: 138 AATSEEFQRLADGYRNQGSSALSISGEGLWLRQASASGQSVIHATGTVNGDDFALHDVTI 197 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 A + + + + ++ + + + L T Sbjct: 198 TTFSSDGKPNQQIAARQADLENGYWTLRQAKVWTLEDDLNPETNATTHEVLNLPTTLTRD 257 Query: 236 STIVLKANDQNLS-FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + ++S + L ++ + Y +L + LF V LI Sbjct: 258 RILDTLGQQDSVSVYDLPQLISDLREAGFATKQYEVWLQVQLARPLFLVSMVLIGAAF-- 315 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 VR + ++ + FG+++ ++ + +N + + + I Sbjct: 316 TMRHVRFGGTGIAVLTAVLLGFGIYFIRNFAQ-ILGENGQLPIFVAAWAPPFAGI 369 >gi|254477617|ref|ZP_05091003.1| permease YjgP/YjgQ [Ruegeria sp. R11] gi|214031860|gb|EEB72695.1| permease YjgP/YjgQ [Ruegeria sp. R11] Length = 367 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 48/360 (13%), Positives = 113/360 (31%), Gaps = 12/360 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + + Y R + F + C ++ + +I + ++I + S L ++ P L Sbjct: 2 TLDFYYARRFLQWFAVICAVLLTLVMLIDLNEQIRRFDAQDLSFGQLFGLTLLNAPAALS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILL--------SIFL 114 P + T + + R++EL++ G S I + + LA + + + Sbjct: 62 EFLPLIMILTTIVLFVGLARSSELVVTRAIGRSGIRALAAPVVLAAFIGLLAVSTLNPIV 121 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF 174 + N + A L +L + S + TL G+ Sbjct: 122 AATSNHYRDLAETYRNGGPAALSLTGEGLWLRQGGAQGQSVIHAKGYSGDVEDVTLLGVT 181 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 I+ + ++ N + ++ + + + S L T + Sbjct: 182 ILSYGPEGRPIRQTVARSATLDGSDWVLTNAKVWPLVTGVNPETNATEHASLRLSTTLTS 241 Query: 235 SSTIVLKANDQNLS-FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 +S + L + Y L + LF + L+ Sbjct: 242 ERIRDTLGTATGISVYDLPATIRELAEAGFSTKRYEVWLQVELARPLFLIAMVLVGAAF- 300 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 R + +++ + FG+++ ++ + +N L + +++I L M Sbjct: 301 -TMRHARFGGTGLAVLMAVLLGFGLYFLRNFAQ-ILGENGQIPVALAGWAPPVAAILLTM 358 >gi|329118129|ref|ZP_08246841.1| YjgP/YjgQ family permease [Neisseria bacilliformis ATCC BAA-1200] gi|327465789|gb|EGF12062.1| YjgP/YjgQ family permease [Neisseria bacilliformis ATCC BAA-1200] Length = 356 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 43/356 (12%), Positives = 117/356 (32%), Gaps = 4/356 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ Y++R + L + ++ + I+ + + + + IP Sbjct: 1 MKTIPRYLIRQLSVMSLYAMFALLALYSFFDIVAEAGGIGEGGYTAGKMAQYVFLQIPDH 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + L+ + N+EL +I +G S L+ L ++ + + + Sbjct: 61 AYQLMPLAVLIGSLLALSRLAANSELTVIKTSGMSTANLLTVFLIFGLIFATATALLGEL 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + L A+ + + + + + + + P+ TL+GI D Sbjct: 121 AAPAANRYAENLKTTAKNGKIST--GAEGLWIKEQNSIVNVREMLPDQTLRGIKAFRHND 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + L + + +++ S +++ Sbjct: 179 AFQLIESWQADAATVAPDGTWRLENVRRSILGGERVRTERHERENWQAGIRSGLLDVLLV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + +L+ L + + + YR E+ ++L V+ ++ + A Sbjct: 239 SPDQMSLAALT-AYIAHLEENRQKTDLYRIEWWRKLMYPAATVVMAFVAFAFTPQSARHG 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 I L ++F ++ P ++ + L ++ + +I++ Sbjct: 298 NMGLKLFGGICLGLAFHFAGRLFGFTSRLYGIPPFLAAV-LPTLLFAAWAVWLIRR 352 >gi|294648981|ref|ZP_06726429.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] gi|292825116|gb|EFF83871.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] Length = 366 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 51/363 (14%), Positives = 118/363 (32%), Gaps = 16/363 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + + L+ + I Q+++ + +LL I Y +P L Sbjct: 2 IIRRYLVKQVVSTSLVVTALLTLIIMGGQLIKIFGRAAQGRLDGGVLLSIIAYRLPEFLT 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + V + + E+ +++ +G SR L + +L + + I + Sbjct: 62 LILPLGFFIGLMLVFGRLYVDHEMAVLNGSGVSRNQLTRLLLPMTAVFLIVQAVLMCWGA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD--SRD 180 + L + F + F S L+ IF R+ Sbjct: 122 SAGIRGYQSLMQTQAVRAGFDLVRPKEFISSGSYTIYAGSLSEDRKNLKDIFYYYKSDRE 181 Query: 181 TQTHKIYYAQSG---SIDLDRQAII-LNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + ++ A+ I+ D +++ L G + P + +F+SY L+ E+ Sbjct: 182 DKPDQMILAKEATRVEIENDTASVVDLVQGRRYEIYPNQPRYTQAEFQSYRLRLENDKDV 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + L ++ R E R+ V+ +++ ++ Sbjct: 242 NFESEDVEALSMSKLWQKRDDFVVRG--------ELGWRIFGPFVMVVALFLAVALSEVS 293 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 RQ + I + + + ++ + L + L K+ Sbjct: 294 P--RQGRYYRLIPAIFIFASLIVLMIAIKTRISKEELDIWAYPAVLLIYGIAAALFTRKQ 351 Query: 357 KYT 359 K Sbjct: 352 KLA 354 >gi|90580731|ref|ZP_01236534.1| putative permease [Vibrio angustum S14] gi|90437999|gb|EAS63187.1| putative permease [Vibrio angustum S14] Length = 366 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 50/359 (13%), Positives = 117/359 (32%), Gaps = 21/359 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R +S L + + + + + + + +++L G IP++ Sbjct: 2 IIVRYLTRETLKSQLAVLFVLFLVFISQKFISILADATDGSIPSDLILTFMGLSIPSMAL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG + L++ L LA++ ++ + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGMGKKLLLQSALALAVITGAIAAVNSFWVA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSY----LEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 P + I+QL + + T + + I+ + + + Sbjct: 122 PWSQEHIEQLKEETKAGPTLNMLVKGTFQPAPNGSGVIFIDNITDKGSKLHKVFVAQLKA 181 Query: 179 RDTQTHKIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 DT + A +G + RQ + LNDG + P + SI F Y Sbjct: 182 TDTLQPSVIVADNGTVKELSDGRQMLELNDGARYEGVPTQLNYSITHFNDYQALIGQREV 241 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 Q L+ + ++E R + + L+ ++ Sbjct: 242 KAGNRDWEAQPTMALI----------KDQSLAAKAELQWRFSL---VLCIPLLVMIVVPL 288 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFLLM 353 A+ ++ + + ++ I F S IE I ++ + L + Sbjct: 289 SAVNPRQGRFAKLAPAVLIYLAYFLAISSAKSAIEDGIIPSAIGMWPINITTLLVALAL 347 >gi|256823037|ref|YP_003147000.1| permease YjgP/YjgQ family protein [Kangiella koreensis DSM 16069] gi|256796576|gb|ACV27232.1| permease YjgP/YjgQ family protein [Kangiella koreensis DSM 16069] Length = 354 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 40/355 (11%), Positives = 103/355 (29%), Gaps = 3/355 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI + I + +M+ + I + ++ + L S L P Sbjct: 1 MNILRFYIGKTILATSVMTLFTLAIIRVLFSLIDESGDFGKGSYQFVDGLAYSLLLSPQY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + L + ++EL ++ G + + ++ L ++L F Sbjct: 61 IYEFFPMAILIGSIAGLGLLASHSELTVMRAAGKTTMQIVGSALSYGLILIAFAIFLGEY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + PK + + +A L E+ ++ + + + Sbjct: 121 VAPKTTRMAEDIRNRAILGEQLLKAEQGVWVKDGSKMVHIDEMLGSDRMDGVSIYQFDSQ 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + I +A S I L +G + + + + N S + Sbjct: 181 QKLESIIHAPSALI--SEGVWRLQNGYQSYLTDTGINRERFDAMEWRTNIQMDNLSVLSD 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 ++ L ++Y F +++ Q L I +++ Sbjct: 239 DPETLDIMSLYR-YREYLANNGLDTQSYDLAFWRKIIQPLSTAIMIVLAASFVFGPMRSV 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + +++ + + P + + + + L+ K Sbjct: 298 SMGARVLVGVLTGMAYFFAVRTFGPVSLVFGMPAFFGAILPPAIFAAGAWYLLRK 352 >gi|293393092|ref|ZP_06637407.1| YjgP/YjgQ family membrane protein [Serratia odorifera DSM 4582] gi|291424238|gb|EFE97452.1| YjgP/YjgQ family membrane protein [Serratia odorifera DSM 4582] Length = 356 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 47/354 (13%), Positives = 115/354 (32%), Gaps = 2/354 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ + ++ V S + +P + + Sbjct: 5 LDRYIGKTIFNTIIMTLFMLVSLSGIIKFVDQLRKVGQGEYSALGAGMYTLLSVPKDVEI 64 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 65 FFPMAALLGALLGLGQLATRSELVVMQASGFTRLQIAGSVMKTAIPLVLLTMAIGEWVAP 124 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + + Q+ +N + D + +I I + N L G+ I D + Sbjct: 125 QG-EQMARNYRAQQMYGGSLLSTKNGLWAKDGNDFIYIERVAGENELSGVNIYHFNDRRR 183 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 + + + D + + + + + L + Sbjct: 184 LETVRYAATATFEDGAWQLSQVDTSDLTNEKQVTGTQTLTGVWKTNLTPDKLGVVALDPD 243 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 ++S L N + Y+ ++ L + L+++ Sbjct: 244 SLSISGLHN-YVKYLKQSGQEASRYQLNMWSKIFSPLSVAVMMLMALSFIFGPLRSVPMG 302 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P + L L + L++K++ Sbjct: 303 MRVVTGISFGFLFYVMDQIFGPLSLVYNMPPVLGALLPSLLFLLISVYLLLKRR 356 >gi|206575795|ref|YP_002240776.1| putative permease [Klebsiella pneumoniae 342] gi|288937432|ref|YP_003441491.1| permease YjgP/YjgQ family protein [Klebsiella variicola At-22] gi|290512173|ref|ZP_06551540.1| permease [Klebsiella sp. 1_1_55] gi|206564853|gb|ACI06629.1| putative permease [Klebsiella pneumoniae 342] gi|288892141|gb|ADC60459.1| permease YjgP/YjgQ family protein [Klebsiella variicola At-22] gi|289775168|gb|EFD83169.1| permease [Klebsiella sp. 1_1_55] Length = 360 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 47/355 (13%), Positives = 116/355 (32%), Gaps = 3/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ + ++ + + +P + + Sbjct: 7 LDRYIGKTIFNTIMMTLFMLVSLSGIIKFVDQLKKSGQGSYDALGAGLYTILSVPKDIQI 66 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 67 FFPMAALLGALLGLGMLAQRSELVVMQASGFTRLQVALAVMKTAIPLVLLTMAIGEWVAP 126 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+ + ++ L+ + + + + + + Sbjct: 127 QGEQMARNYRAQQMYGGSLLSTQQGLWAKDGHNFVYIERVKGNDELGGVSIYAFNPERRL 186 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + YA S D + + L+ + P S M ++ + L Sbjct: 187 ESVRYAASAKFDSENKVWRLSQVDESNLTDPKQVTGSQMVSGTWKTNLTPDKLGVVALDP 246 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S L N + Y+ ++ Q L + L+++ Sbjct: 247 DALSISGLHN-YVKYLKSSGQDPGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPM 305 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P I L L I L ++ +K Sbjct: 306 GVRVVTGISFGFIFYVLDQIFGPLTLVYGIPPIIGAL-LPSASFFLISLWLMMRK 359 >gi|152973139|ref|YP_001338285.1| putative transmembrane protein, transport [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238892751|ref|YP_002917485.1| putative transport system permease component [Klebsiella pneumoniae NTUH-K2044] gi|330016469|ref|ZP_08308442.1| lipopolysaccharide export system permease protein LptG [Klebsiella sp. MS 92-3] gi|150957988|gb|ABR80018.1| putative transmembrane protein, transport [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238545067|dbj|BAH61418.1| putative transport system permease component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|328528830|gb|EGF55773.1| lipopolysaccharide export system permease protein LptG [Klebsiella sp. MS 92-3] Length = 360 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 47/355 (13%), Positives = 116/355 (32%), Gaps = 3/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ + ++ + + +P + + Sbjct: 7 LDRYIGKTIFNTIMMTLFMLVSLSGIIKFVDQLKKSGQGSYDALGAGLYTILSVPKDIQI 66 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 67 FFPMAALLGALLGLGMLAQRSELVVMQASGFTRLQVALAVMKTAIPLVLLTMAIGEWVAP 126 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+ + ++ L+ + + + + + + Sbjct: 127 QGEQMARNYRAQQMYGGSLLSTQQGLWAKDGHNFVYIERVKGNDELGGVSIYAFNPERRL 186 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + YA S D + + L+ + P S M ++ + L Sbjct: 187 QSVRYAASAKFDSENKVWRLSQVDESDLTDPKQVTGSQMVSGTWKTNLTPDKLGVVALDP 246 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S L N + Y+ ++ Q L + L+++ Sbjct: 247 DALSISGLHN-YVKYLKSSGQDPGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPM 305 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P I L L I L ++ +K Sbjct: 306 GVRVVTGISFGFIFYVLDQIFGPLTLVYGIPPIIGAL-LPSASFFLISLWLMMRK 359 >gi|157413956|ref|YP_001484822.1| putative permease [Prochlorococcus marinus str. MIT 9215] gi|157388531|gb|ABV51236.1| Permease [Prochlorococcus marinus str. MIT 9215] Length = 403 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 54/376 (14%), Positives = 129/376 (34%), Gaps = 25/376 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQ-ILQRINLVSSSTESLNILLKISGYLIPTVL 61 + ++L I + + I+ + + I V L + LK+ + +P+ L Sbjct: 27 LLDRWLLGQIIPPMIFAISAFTVISLSVGVMFDLIRKVVEYGLPLFLALKVLFFSLPSFL 86 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + T ++ N+ELL + + G +I P + L+I ++ F + + Sbjct: 87 VLSFPMAVLLSTLLAYGKLSSNSELLALKSLGIKTSRIIAPAIALSIFMTGLTFYFNDNL 146 Query: 122 EPKCRS-----------------TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKY 164 PK K+ ++ + + +I +++ Sbjct: 147 VPKSNKLAEATLRAGIGSSFSEEEGKENIMFSRYGSRINASTKKPTKNYSQLTHIFYAQW 206 Query: 165 NPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDIS-IMKF 223 N + + ++D +I A S D + I + G + +P + + K Sbjct: 207 YKNKLMGNVTLLDFSREDLQQILKADSARFDKKNSSWIFSKGSIVSITPSGQTTNIQFKE 266 Query: 224 KSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRP-ELLETYRSEFHKRLTQWLFP 282 +Y + + AN+ L + + + + ++ T Sbjct: 267 YTYPFVEGPMELAKVPKDANEMTLKQAIQAEKIYKKTGNIKEVRRIKVRIQEKFTLPFAC 326 Query: 283 VIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 ++FGLI + K +S+ + +++ S+I + PI + Sbjct: 327 LVFGLIGSSLG--SKSNLRSSKSQGFGLSVIL-ILIYYVMSFIFSSLGVKGLLPPIFAAW 383 Query: 343 LFCISSI--FLLMIKK 356 L + S+ + +++K Sbjct: 384 LPVLISLGGGIYLLRK 399 >gi|254360523|ref|ZP_04976672.1| possible inner membrane protein [Mannheimia haemolytica PHL213] gi|153091063|gb|EDN73068.1| possible inner membrane protein [Mannheimia haemolytica PHL213] Length = 365 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 45/359 (12%), Positives = 114/359 (31%), Gaps = 3/359 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E YI + I + ++ ++ + +I+ ++ V + + IP Sbjct: 6 MNILERYIGKTILSAIFLTLFMLIGLGAIIKFVEEFRDVGRGSYDGLKAAYYTFLTIPRD 65 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + L ++ +EL+++ +G SR + V+ A+ L IF I Sbjct: 66 IETFFPIAALLGSLLGLGNLASLSELVVMQASGFSRFRIGLAVMKTALPLVIFTMIIGEW 125 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD--LYIKISKYNPNNTLQGIFIVDS 178 P+ + + + AQ + ++ + + + I + + + Sbjct: 126 GVPQTEQFARNMRSIAQSGGSMLATKDGFWAKDGNSFIYINHIKNEKSLDNVLIYQFGEG 185 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 ++ + + + D + +L+ E + + + + + Sbjct: 186 QNKRELQSVLKARTANYSDEKGWVLSKVEKSTVGENQIQQAKQPDQVWQTSLTPSKLGIV 245 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 LK ++S L + + + + F +++ Q + + L++I Sbjct: 246 SLKPESLSISGLAD-YVGFLKDTGQDPKRFEITFWRKVFQPISMAVMMLLAISFIFGPLR 304 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I I F V + I + I ++ KK Sbjct: 305 SSTMGAKIVIGIVAGFMFYVANIVFGNLSLIATWLPIPVGALIPSLLCLIIVWWLLSKK 363 >gi|119944176|ref|YP_941856.1| permease YjgP/YjgQ family protein [Psychromonas ingrahamii 37] gi|119862780|gb|ABM02257.1| permease YjgP/YjgQ family protein [Psychromonas ingrahamii 37] Length = 358 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 45/355 (12%), Positives = 125/355 (35%), Gaps = 17/355 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++ +S + +V I + + + + ++++ + +P + Sbjct: 2 ILLRYLMLETFKSQIGILFVLVLIFVSQKFITILAQAINGVIPADLVMTLLYLNLPQLGT 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + ++ +E++ + + G S ++K L L+ L F + + Sbjct: 62 LMLPISFYLAVLFAHGRLHGESEMIAMSSCGYSPNNVLKATLLLSFLTFAFAAYNSLYLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF--IVDSRD 180 P + + +AQ + + L E F + + + + + + L IF Sbjct: 122 PLSEDKMISVIEEAQANTSSATLIEGRFHKTSGNGSVVYIEKSADKKLDKIFAAHWPEDR 181 Query: 181 TQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 Q + A G + D + L DG+ + + +FK+Y + + Sbjct: 182 KQAPSVLTAAEGYLESKKDGTWLTLTDGQRYAGIVGQHEFDHSEFKTYEVHIANREVQKQ 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 V + L + + Y++E R+ + ++ +++ A + Sbjct: 242 VRGVQALPTAALFSVD----------NPKYQAELQWRIGIPVSILLMTFMAVPLA---KV 288 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 ++ + + +L++ F S IE + +++ + +++ Sbjct: 289 NPRQGRYSKLLPALALYLTFFLLLSTAKSLIEDGSLPVFSIWIVQISFLLLGIIL 343 >gi|308189158|ref|YP_003933289.1| Inner membrane protein yjgQ [Pantoea vagans C9-1] gi|308059668|gb|ADO11840.1| Inner membrane protein yjgQ [Pantoea vagans C9-1] Length = 358 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 38/357 (10%), Positives = 113/357 (31%), Gaps = 2/357 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + YI + I + +++ +V ++ +I+ + ++ + S + +P + Sbjct: 3 RVLDRYIGKTIFNTIMLTLFMLVSLSGIIKFVDQLRKTGQGSYSALSAGYYTLLSVPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ + +EL+++ G +R+ + V+ AI L + + Sbjct: 63 EIFFPMAALLGALLGLGALAQRSELVVMQAAGFTRMQVALSVMKTAIPLVLLTMAIGEFV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + A+ + L+ + ++ N + Sbjct: 123 APSGEQMARNYRAQQLYGGALVSTQNGLWAKDGNNFIYIERIKGDNEIDGVSIYNFNDQR 182 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK-SYTLQTESANSSTIVL 240 + + YA + + D ++ +L+ + + + + L Sbjct: 183 RLQSVRYAATATWDAAKKRWMLSQVDESNLTDPKLITGSQSLSGEWKTNLTPDKLGVVAL 242 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + ++ L + + Y+ ++ Q L + L+++ Sbjct: 243 DPDALSIRGL-HSYSKYLKQSGQEAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSV 301 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P + + + ++IK++ Sbjct: 302 SMGVRVVTGISFGFLFYVLDQIFGPLSLVYGLPPILGAILPSFAFFAISMFMLIKRR 358 >gi|46198337|ref|YP_004004.1| hypothetical protein TTC0029 [Thermus thermophilus HB27] gi|46195959|gb|AAS80377.1| hypothetical membrane spanning protein [Thermus thermophilus HB27] Length = 347 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 49/357 (13%), Positives = 116/357 (32%), Gaps = 10/357 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ + Y+LR F L IV + + + + + + LL+ + P Sbjct: 1 MKTLDRYLLREALPLFGGGLLVIVLLFLGGAVYEVLAPLVAKGADPYTLLRYLLFRTPEA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + +L+ + + EL + G R L+ P L L +++ F+ Sbjct: 61 LARGAPVAYLFALLVLLSRLGEDAELKALLALGVRRERLLLPFLLLGTAIALAAFLLGEG 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ + + L + L + L F+ + + K + Sbjct: 121 LVPQALAQGQDLLRREVLERPRALLTPGATFQDAQGRVVYVGKVEGEAIGALRVLSREEV 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + G + ++ I +G R ++ +F+ L + Sbjct: 181 LLAERG-SFRGGVLHVEEGTRITYEGSRPR--------TLARFQRGELVLKDLTFDPWQN 231 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 AN L+ L + +++R + L +F L ++ A Sbjct: 232 PANRMTLAEL-RKEVQRLRQMGVRAGLEATTYYRRFAEPLAAPVFALFAVGLAFYLLGGS 290 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + + + + + + + +P+ L+ +FL + ++ Sbjct: 291 RSLGLVGVAVLTFFYYATWSVGRIMGEQNALDPFLAAFGPNLLYGALGLFLFLGGRR 347 >gi|289678193|ref|ZP_06499083.1| permease YjgP/YjgQ [Pseudomonas syringae pv. syringae FF5] Length = 321 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 43/319 (13%), Positives = 99/319 (31%), Gaps = 4/319 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + + L I+ + + + + + S T +L L P Sbjct: 1 MVKLDRYIGKSVLLAILAVLGIILGLVSLFAFIDEMGDI-SDTYTLADALSYVMLTAPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ ++EL I+ G S ++ V+ ++L I + Sbjct: 60 VYDTLPMAALIGCLIGLGTLASSSELTIMRAAGVSIGRIVWAVMKPMLVLMIAGVLVGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + AQ + L+ R D+ + L Sbjct: 120 VAPYAENQAQAARSLAQGSGDAQSARHGLWHRQGDEFIHINTVQPNGLMLGVTRYRFDDQ 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 +A+ D L D + S ++ + + + ST+++ Sbjct: 180 RHMLTSSFAKEAHFKTD--YWELKDVATTHFNDGSTEVVNTPVERWDVALSPQLLSTVIM 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 ++S L + + Y F ++ Q V L++I Sbjct: 238 PPESLSISGL-WSYAHYLADQGLSNGRYWLAFWTKVLQPAVTVALVLMAISFIFGPLRSV 296 Query: 301 QRKKIHPIFISLSISFGVF 319 + + + +F + Sbjct: 297 TLGQRVFTGVVVGFTFRII 315 >gi|302188385|ref|ZP_07265058.1| permease YjgP/YjgQ [Pseudomonas syringae pv. syringae 642] Length = 353 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 48/355 (13%), Positives = 111/355 (31%), Gaps = 4/355 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + + L I+ + + + + + S T +L L P Sbjct: 1 MVKLDRYIGKSVLLAILAVLGIILGLVSLFAFIDEMGDI-SDTYTLADALSYVMLTAPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ ++EL I+ G S ++ V+ ++L I + Sbjct: 60 VYDTLPMAALIGCLIGLGTLASSSELTIMRAAGVSIGRIVWAVMKPMLVLMIAGVLVGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + AQ + L+ R D+ + L Sbjct: 120 VAPYAENQAQAARSLAQGSGDAQSARHGLWHRQGDEFIHINTVQPNGLMLGVTRYRFDEQ 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 +A+ + D L D + S ++ + + + ST+++ Sbjct: 180 RHMLTSSFAKEANFKTD--YWELKDVATTHFNDGSTEVVNTPVERWDVALSPQLLSTVIM 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 ++S L + + Y F ++ Q V L++I Sbjct: 238 PPESLSISGL-WSYAHYLADQGLSNGRYWLAFWTKVLQPAVTVALVLMAISFIFGPLRSV 296 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + + +F + + P + +L C + LL+ + Sbjct: 297 TLGQRVFTGVVVGFTFRIIQDLLGPSSLLFGFPPLLAVLLPAAACALAGVLLLRR 351 >gi|218961270|ref|YP_001741045.1| putative Permease YjgP/YjgQ [Candidatus Cloacamonas acidaminovorans] gi|167729927|emb|CAO80839.1| putative Permease YjgP/YjgQ [Candidatus Cloacamonas acidaminovorans] Length = 442 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 70/411 (17%), Positives = 145/411 (35%), Gaps = 63/411 (15%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y+L+ F ++ + + F+ +I+ +NL+ + ++ G +P + Sbjct: 1 MKILKRYLLKEHIAPFFIALMVVTFVLLSDRIIDLMNLIIEKKLPWQTVFEVFGLSLPYM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + T M+ + E+ I ++G + +LI P++ A+LL+ + + Sbjct: 61 LALSIPMAVLVATILAFGRMSVDREITAIKSSGINVYSLIGPLVIAALLLTGLMVYFNHW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P +K L K + ++E F D Y ++ ++ L + I D Sbjct: 121 FLPDTNHKLKNLMLKIAYYKPMTIIKEKEFTNFMD--YTIYARETTDSLLTDVLIYDRSQ 178 Query: 181 TQTHKIYYAQSGSIDLDRQAI----ILNDGEVHRKSPIS-KDISIMKFKSYTLQTESANS 235 + + +A+SG++ ILNDGE+H ++ F Y + + S Sbjct: 179 SHFPRTIFAKSGNVIQKDNGNSLQIILNDGEMHERNEKEVGKYQKTTFSRYIINVRNLGS 238 Query: 236 STIVLKANDQNLSFL-------------------------LNPNPNNPNYRPEL------ 264 + + + ++ + LN P+ Sbjct: 239 NMEMFETGYRSDREMTYNQLITAIGDHKKELQTKQQEIEELNKRIELLQKSPQNFTRNME 298 Query: 265 ---------------------LETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 + + E+HK+ + +IF LI I Sbjct: 299 LRRLQAMQKMVIDRTQELKELINSLLVEYHKKFSMSFAIIIFVLIGIPLGLMTRTS---- 354 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 I F SI F V++ ++ + P L ++L I + L ++ Sbjct: 355 GIGMSFSVSSIIFLVYYIALNGGEQLADKGFMPPFLAMWLANIIFLILAVL 405 >gi|260596297|ref|YP_003208868.1| lipopolysaccharide ABC transporter permease [Cronobacter turicensis z3032] gi|260215474|emb|CBA27593.1| Lipopolysaccharide export system permease protein lptG [Cronobacter turicensis z3032] Length = 359 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 118/357 (33%), Gaps = 3/357 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI R I + +M+ +V ++ +I+ + ++ + + + +P + Sbjct: 4 SVLDRYIGRTIFNTIMMTLFMLVSLSGIIKFVDQLKKTGEGSYTALGAGTYTLLSVPKDI 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L + + +EL+++ +G +R+ + V+ AI L IF + Sbjct: 64 QIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVAASVMKTAIPLVIFTMAIGEWV 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + L A+ + ++ ++ + + N + Sbjct: 124 APQGEQMARNLRAQQMYGGSLLSTQQGMWAKDGSNFVYIERVKGENELGGISIYAFNDKR 183 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVL 240 + + YA S D + + L+ + +P S ++ + L Sbjct: 184 RLESVRYAASAKFDAEHKLWRLSQVDESNLKNPQQITGSQTLTGTWKTNLTPDKLGVVAL 243 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + ++S L N + Y+ ++ Q L + L+++ Sbjct: 244 DPDALSISGLRN-YVTYLKASGQDASRYQLNMWSKILQPLSVAVMMLMALSFIFGPLRSV 302 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P I L L I L ++ K+ Sbjct: 303 PMGVRVVTGISFGFIFYVLDQIFGPLSLVYGIPPIIGAL-LPSASFFLISLWLLMKR 358 >gi|254229296|ref|ZP_04922714.1| putative permease, YjgP/YjgQ family [Vibrio sp. Ex25] gi|262393202|ref|YP_003285056.1| hypothetical protein VEA_002429 [Vibrio sp. Ex25] gi|151938220|gb|EDN57060.1| putative permease, YjgP/YjgQ family [Vibrio sp. Ex25] gi|262336796|gb|ACY50591.1| putative membrane protein [Vibrio sp. Ex25] Length = 366 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 45/357 (12%), Positives = 119/357 (33%), Gaps = 19/357 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + + + S ++ I G +P + Sbjct: 2 IIVRYLIRETLKSQFAIFFVLFLVFVSQKFISVLADASDGDIPAGLIFSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+++++ TG L++ L+LA++ S + + Sbjct: 62 LMLPLSLYIGILITFGRLYAESEIVVMNATGIGNKFLVQAALYLALITSAVAAFNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + ++QL + + L++ F D + +NTL +F+ R Sbjct: 122 PWSQDRVEQLYEQVAAENSVDLLKKGQFQGTPDGSSVVFIDDIKDNTLSNVFVAQMRPRD 181 Query: 183 THK-----IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + + RQ I + +G + P + I KF Y Sbjct: 182 SVLPSVMFSSSGEVKELSDGRQVITMKEGTRYEGVPTRVEYMITKFDEYEGVIGQREVKK 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 L+ ++E R++ + V L++++ A Sbjct: 242 KGRDWEAYPTVDLI----------GHPDPEAQAELQWRISLF---VCIPLLTMLVIPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + ++ + + ++ I F S + ++ + ++ + + ++ Sbjct: 289 VNPRQGRFAKMGPAILIYLAYFLAISATKSAL-EDGDIPAAIGMWPINAMLLIVAIM 344 >gi|238921309|ref|YP_002934824.1| hypothetical protein NT01EI_3453 [Edwardsiella ictaluri 93-146] gi|238870878|gb|ACR70589.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 356 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 45/354 (12%), Positives = 116/354 (32%), Gaps = 2/354 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI R I + +M+ +V ++ +I+ + ++ V S+ + +P + + Sbjct: 5 LDRYIGRTIFNTIMMTLFMLVSLSGIIKFVDQLRKVGQGDYSVAGAGLFTLLSVPKDIEI 64 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ G +R+ + V+ AI L + + P Sbjct: 65 FFPMAALLGALLGLGMLAQRSELVVMQAAGFTRMQVASAVMKTAIPLVLLTMAIGEWVAP 124 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+ Q+ + + D + ++ IS+ + TL G+ I + Sbjct: 125 QGDQAARNYRAQ-QMYGGSLLSTQGGLWAKDGNQFVYISQVVNDRTLGGVSIYTLDAQRK 183 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 + + +Q + E + P S + + + + Sbjct: 184 LTSLRYAASATFDGKQWKLAQVEESNLSDPKMITGSRTLSGVWKTNLTPDKLGVVAVSPD 243 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 ++S L + Y+ ++ L + L+++ Sbjct: 244 SLSISGLY-YYVKYLKQSGQESSRYQLNLWIKVFAPLSVAVMMLMALSFIFGPLRSVPMG 302 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I F V + + P I + + L+++++ Sbjct: 303 VRVLTGICFGFVFYVLDQIFGPMSLVYNVPPVIGAVLPSALFLGLSVYLLLRRR 356 >gi|261253953|ref|ZP_05946526.1| predicted permease [Vibrio orientalis CIP 102891] gi|260937344|gb|EEX93333.1| predicted permease [Vibrio orientalis CIP 102891] Length = 368 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 42/356 (11%), Positives = 119/356 (33%), Gaps = 19/356 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L + + ++++ + S ++++ +P++ Sbjct: 2 IIVRYLIRETLKSQLAIFFILFLVFLSQKLIKVLADASDGDIPASLVMHYVALSMPSMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LA++ + + Sbjct: 62 LMLPLSLFLGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLAVITGLIAGFNSFYFA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + + QL + + + L++ F D + L+ +F+ R Sbjct: 122 PYSQDKLVQLQEEVEAENSVDLLKKGQFQGTPDGSSVVFIDDIDGKQLKHVFVAQMRPRD 181 Query: 183 T-----HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + + RQ I + DG + P D + +F Y + Sbjct: 182 SILPSVSFSQSGEVKELSDGRQVIRMYDGTRYEGVPTRVDYMVTEFDQYEGLIGQRDVQR 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 L+ ++E R++ V L++++ A Sbjct: 242 KGRDWEALPTMDLM----------KNPDPRAQAELQWRISL---VVCIPLLTMLVVPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + ++ + + ++ I F S + ++ ++ ++ + + + Sbjct: 289 VNPRQGRFAKMGPAILIYLAYFLSISATKSAL-EDGTIPTMVGMWPINAALLLTAL 343 >gi|323496138|ref|ZP_08101198.1| hypothetical protein VISI1226_19659 [Vibrio sinaloensis DSM 21326] gi|323318882|gb|EGA71833.1| hypothetical protein VISI1226_19659 [Vibrio sinaloensis DSM 21326] Length = 366 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 52/355 (14%), Positives = 121/355 (34%), Gaps = 19/355 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ + ++ + + ++L I G IP + Sbjct: 2 IIVRYLIRETLKSQLAIFFVLLLVFISQTFIKVLGDATDGDIPARLILAIVGLNIPQMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ + LA + + + + Sbjct: 62 LMLPMSLYLGILLTFGRLYSESEITVMNATGMGSKFLIRAAMSLAFITTALAAFNTLYLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + QL + + L+ F R D + +N L +F+ R Sbjct: 122 PWSQEREAQLIEQVAAESSVDLLKAGQFQRTPDGSSVVFIDSIKDNQLNNVFVAQLRPRD 181 Query: 183 --THKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + ++ SG + RQ I+++DG + P D + +F+ Y+ Sbjct: 182 AILPSVMFSNSGEVKEHSDGRQMIVMHDGTRYEGIPTRLDYMVTEFEQYSGLIGQREVEA 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 L+ + ++E R++ V L++++ A Sbjct: 242 KRRGWGAVPTLDLIE----------SSDLSAKAELQWRISL---FVCIPLLTMLVVPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFL 351 + ++ + + ++ F F S IE I ++ F + + Sbjct: 289 VNPRQGRFAKMGPAILAYFVYFISISTTKSAIEDGNIPAAIGMWPINFALLVAAI 343 >gi|254225899|ref|ZP_04919501.1| membrane protein, putative [Vibrio cholerae V51] gi|125621525|gb|EAZ49857.1| membrane protein, putative [Vibrio cholerae V51] Length = 334 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 52/347 (14%), Positives = 114/347 (32%), Gaps = 19/347 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + ++ + S +++L I G +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASDGEIPTSMILSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LA++ + + + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + L + + L++ F R D + N L +F+ Sbjct: 122 PWSQDKEAHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLYNVFVAQLAPRD 181 Query: 183 THK-----IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + + RQ I L DG + P D I F SY + Sbjct: 182 SILPSVMFSHSGDVKELSDGRQIITLYDGTRYEGVPTRVDYMITNFDSYDGLIGQREVKS 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 LLN ++E R++ V L++++ A Sbjct: 242 AERDWEALPTLSLLN----------NADRRAQAELQWRISL---VVCIPLLTMLVVPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 + ++ + + ++ I F S I ++ I+ L+ Sbjct: 289 VNPRQGRFAKMGPAILIYLTYFLALSATKSAI-EDGSLPVIIGLWPI 334 >gi|145588807|ref|YP_001155404.1| permease YjgP/YjgQ family protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047213|gb|ABP33840.1| permease YjgP/YjgQ family protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 371 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 53/355 (14%), Positives = 127/355 (35%), Gaps = 15/355 (4%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 + R + + L +V I +++ + ++ + +L + L ++ Sbjct: 7 LRRELSLTTGGVFLVLVTIMITTLVIRILGFAANGAINPEDVLVLISLATLGYLAVLLTV 66 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 + T VL +++E+++ +G S LI+P+L A L I + + + P Sbjct: 67 SLFVATLIVLVRWYKDSEMIVWFASGLSISNLIRPILQFATPLIIIIALLALFVWPWANR 126 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 +S + Q S + F + + + + I + Sbjct: 127 ESTLISQRFQQRDDVSMVSSGQFRESARAERVFFIEELDVDKNEVKNIFVADSKNGRVSV 186 Query: 188 YAQSGSIDLD----RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 S + ++++L++G + P D I++F YT + S + + Sbjct: 187 AVASAGYIQNSEDGEKSVVLHNGRRYEGQPTQPDFRILEFTDYTTKIRSKEALAPPPRDR 246 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 ++ +S LLN P + R+E R+ L + LI+I A + + Sbjct: 247 EKTISELLNETE------PTTINPNRAELLWRIGLPLMALGLVLIAIPLAY---VNPRLG 297 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMIKK 356 +F ++ I + + + + +++ I + L + +L+ + Sbjct: 298 NYTAMFYAILIYLIYSNLLNLTQNFVSQGKFGFFVGIWPIHLLALVIATILIRNR 352 >gi|330899516|gb|EGH30935.1| permease YjgP/YjgQ [Pseudomonas syringae pv. japonica str. M301072PT] gi|330975730|gb|EGH75796.1| permease YjgP/YjgQ [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 353 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 48/355 (13%), Positives = 110/355 (30%), Gaps = 4/355 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + + L I+ + + + + + S T +L L P Sbjct: 1 MVKLDRYIGKSVLLAILAVLGIILGLVSLFAFIDEMGDI-SDTYTLADALSYVMLTAPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ ++EL I+ G S ++ V+ ++L I + Sbjct: 60 VYDTLPMAALIGCLIGLGTLASSSELTIMRAAGVSIGRIVWAVMKPMLVLMIAGVLVGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + AQ + L+ R D+ + L Sbjct: 120 VAPYAENQAQAARSLAQGSGDAQSARHGLWHRQGDEFIHINTVQPNGLMLGVTRYRFDDQ 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 +A+ D L D + S ++ + + + ST+++ Sbjct: 180 RHMLTSSFAKEAHFKTD--YWELKDVATTHFNDGSTEVVNTPVERWDVALSPQLLSTVIM 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 ++S L + + Y F ++ Q V L++I Sbjct: 238 PPESLSISGL-WSYAHYLADQGLSNGRYWLAFWTKVLQPAVTVALVLMAISFIFGPLRSV 296 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + + +F + + P + +L C + LL+ + Sbjct: 297 TLGQRVFTGVVVGFTFRIIQDLLGPSSLLFGFPPLLAVLLPAAACALAGILLLRR 351 >gi|225024724|ref|ZP_03713916.1| hypothetical protein EIKCOROL_01610 [Eikenella corrodens ATCC 23834] gi|224942519|gb|EEG23728.1| hypothetical protein EIKCOROL_01610 [Eikenella corrodens ATCC 23834] Length = 356 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 44/360 (12%), Positives = 118/360 (32%), Gaps = 4/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y++R +G + L + L +V + +++ ++ V ++ L+ G + Sbjct: 1 MKLLTRYLIRRLGTATLYALLALVVLFSFFEVINAVDDVGDGNYTVLTLILYVGMRLFGH 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + L+ + +E +I +G S +I V + +L + Sbjct: 61 MYTLLPLAVLIGCLAALSQLASASEWTVIRTSGASLKRIIATVASVGLLAGLLGVALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P ++L A F + D++ + + P+ L GI I Sbjct: 121 VAPYMEQRAERLRLHAVQQTVSLGGSGLWFRQGSDNI--NVREMLPDGRLLGIRIYRYNQ 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + S L + + + +++ Sbjct: 179 HAALESAWQASEGRVNGNGTWTLKQVARTHIAAERTQTEQLASVEWPSDVGVELLGVLLV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + + L ++ + Y + + ++L L + L+++ + + Sbjct: 239 DTDQMSARSL-KMYIDHLQSNGQQTAAYATVWWRKLLYPLICTVMALVALAFTPQSSRHG 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + I L ++F S + ++ P + + L + +I+++ + Sbjct: 298 NIGVRLFLGICLGLAFHFAGLLSGYVAQLSSMPPFGAAI-LPGTVFAIAAAWLIRRQEVR 356 >gi|312884631|ref|ZP_07744334.1| permease [Vibrio caribbenthicus ATCC BAA-2122] gi|309367723|gb|EFP95272.1| permease [Vibrio caribbenthicus ATCC BAA-2122] Length = 367 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 44/353 (12%), Positives = 116/353 (32%), Gaps = 19/353 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + ++++ + + +++ +P++ Sbjct: 2 IIVRYLIRETLKSQFAIFFILFLVFLSQKLIRVLADATDGDIPASLVANYVALSMPSMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LIK L+LAI+ + + Sbjct: 62 IMLPLSLFLGILLTFGRLYAESEITVMNATGIGNKFLIKAALYLAIITGLLAAANAFFFA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ + L +A L++ F D + LQ +F+ R Sbjct: 122 PYSQNQLVHLQEEAAAENNVELLQKGHFQPSPDGSSVVFIDDIDKKKLQNVFVAQLRPRD 181 Query: 183 T-----HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + Y + + RQ I + DG + P D + F Y + Sbjct: 182 SILPSVSFSQYGEVKELSDGRQVIRMYDGTRYEGIPTRLDYMVTNFDQYEGLIGQREIKS 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L + ++E R++ + L++++ A Sbjct: 242 KGRGLDAIPTLNLF----------GDHRPAAQAELQWRISL---VLCIPLLTMLVVPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 + ++ + + ++ I F S + I ++ ++ ++ + Sbjct: 289 VNPRQGRFAKMGPAILIFLAYFLAISAMKSAI-ESGSVSAVIGMWPINGLLLI 340 >gi|152998005|ref|YP_001342840.1| permease YjgP/YjgQ family protein [Marinomonas sp. MWYL1] gi|150838929|gb|ABR72905.1| permease YjgP/YjgQ family protein [Marinomonas sp. MWYL1] Length = 353 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 49/356 (13%), Positives = 120/356 (33%), Gaps = 4/356 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + +FL+ + ++ + + + +++I V + ++ LL++ + +P Sbjct: 1 MTKIDKYIASSVLWAFLIVAVVLLGLDFALTFIEQIKKV-NDNYTIQSLLQVILFRLPGK 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + T L ++ +EL ++ G + +L+S+ Sbjct: 60 LAEYIPVASLIGTLMGLGTLAATSELTVMRAAGMPIWRIGFAACQPILLVSLLGMGVSEF 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + L ++ + D+D I + TL GI I Sbjct: 120 VAPVAEQKANLIEKFKGQESGAFSLTGGVWLKADNDFVY-IDAADAVGTLYGIQIFSPDG 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 Q I A S + LN+ +P + ++ ++ + + Sbjct: 179 QQLKHIITATSAQ-HTEGSQWQLNNVTETIFAPDHVEKKSLEHANWNVSITPEHLFLASQ 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + + +LS L N + Y EF + + + L+++ + Sbjct: 238 EPDALSLSQLKN-YQTYLKQQKLDGAQYELEFWITALRPIASLALVLVALSSVFGPLRSS 296 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + ++F + P I + + C+ + +L+ ++ Sbjct: 297 TMGGRIFTGVIIGLAFQNALNLFGRMSVAINFPPIIGVSIPIIICLLAGIILVRRR 352 >gi|307299316|ref|ZP_07579117.1| permease YjgP/YjgQ family protein [Thermotogales bacterium mesG1.Ag.4.2] gi|306915112|gb|EFN45498.1| permease YjgP/YjgQ family protein [Thermotogales bacterium mesG1.Ag.4.2] Length = 1438 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 47/343 (13%), Positives = 118/343 (34%), Gaps = 3/343 (0%) Query: 13 GRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAME 72 S + + + + +++ ++ L + Y +P + + P + Sbjct: 1 MGSIFVGLAGFIIFVSLELLYYLSDMIIRYKVGIDKLFLLIYYNLPEFIVLGIPVGILLA 60 Query: 73 TTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQL 132 VL+ M + EL+ + G S L+ P L + I+ S F ++ + + P + + Sbjct: 61 IFWVLSRMRSDNELIALQTHGISLKRLVIPFLLIGIIFSGFAYLLNDYLVPAASTKANEA 120 Query: 133 SAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSG 192 A+ L+EN+F + I + + + + + + A+S Sbjct: 121 MARFVYKQPEVTLKENVFMQDSQGRMIYVRRIDQDTKELKNVSIYEVSRGQVTLTTAESA 180 Query: 193 SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS-TIVLKANDQNLSFLL 251 I ++ IL+ +++ M+F + + + K+ + S L Sbjct: 181 VISSNK--WILSKANIYQTDESGFLGVEMQFGTAEFEIDEDIERYLASFKSPKEKTSKEL 238 Query: 252 NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFIS 311 + + ++ + + P++ L+ + + L + + F+ Sbjct: 239 RDDIEAFKNTGINTSSLEVALQEKYSMSIAPLVIVLLGVPVSLMFNLQSKSWSVILTFLL 298 Query: 312 LSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + I G S + + NP P + F I + + + Sbjct: 299 VVIYQGSGAWLSGMGKENLINPSLAPWIPNITFSILGVIIYSL 341 >gi|91228859|ref|ZP_01262764.1| putative permease [Vibrio alginolyticus 12G01] gi|269966356|ref|ZP_06180442.1| conserved hypothetical protein [Vibrio alginolyticus 40B] gi|91187597|gb|EAS73924.1| putative permease [Vibrio alginolyticus 12G01] gi|269829033|gb|EEZ83281.1| conserved hypothetical protein [Vibrio alginolyticus 40B] Length = 366 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 45/357 (12%), Positives = 119/357 (33%), Gaps = 19/357 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + + + S ++ I G +P + Sbjct: 2 IIVRYLIRETLKSQFAIFFVLFLVFVSQKFISVLADASDGDIPAGLIFSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+++++ TG L++ L+LA++ S + + Sbjct: 62 LMLPLSLYIGILITFGRLYAESEIVVMNATGIGNKFLVQAALYLALITSAVAAFNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + ++QL + + L++ F D + +NTL +F+ R Sbjct: 122 PWSQDRVEQLYEQVASENSVDLLKKGQFQGTPDGSSVVFIDDIKDNTLSNVFVAQMRPRD 181 Query: 183 THK-----IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + + RQ I + +G + P + I KF Y Sbjct: 182 SVLPSVMFSSSGEVKELSDGRQIITMKEGTRYEGVPTRVEYMITKFDEYEGVIGQREVKK 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 L+ ++E R++ + V L++++ A Sbjct: 242 KGRDWEAYPTVDLI----------GHPDPEAQAELQWRISLF---VCIPLLTMLVIPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + ++ + + ++ I F S + ++ + ++ + + ++ Sbjct: 289 VNPRQGRFAKMGPAILIYLAYFLAISATKSAL-EDGDIPAAIGMWPINAMLLIVAIM 344 >gi|114331100|ref|YP_747322.1| permease YjgP/YjgQ family protein [Nitrosomonas eutropha C91] gi|114308114|gb|ABI59357.1| permease YjgP/YjgQ family protein [Nitrosomonas eutropha C91] Length = 357 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 125/347 (36%), Gaps = 20/347 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E YI R + F + + ++ + + + + + T + K+ G Sbjct: 1 MGIIERYISRELLLPFFVVTIILIGLFVSFSVARFLTGAVAETLGAIAMFKLVGLKTIIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P F + + L+ MNR+ E+ ++ + G +I+ V +A+ +++ + Sbjct: 61 LEVLVPIAFYVAVIHGLSRMNRDQEINVLRSVGYGDNQIIRTVFIIALPIAVLSGVLSIY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNTLQGIFIVDSR 179 P + ++A+A+ L + F+ + I I + R Sbjct: 121 ARPWAYAESYVMNAQAEAELNTDRFQPGRFYGSEKSGRVIFIRGKDDLEKRMEGIFHYIR 180 Query: 180 DTQTHKIYYAQSGSID----LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + +I ++ G I L DG+++R + S ++F+ E+ + Sbjct: 181 TAENREIIVSREGYQQPMTQEQWPYIELLDGKIYRLGYDAARDSTVQFEKMIYFNENDQA 240 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 KA + L N +E RL++ ++ LI++ Sbjct: 241 QNYRRKAA--STQSLWNSEQPQE----------IAELQWRLSRPAATILLALIAVSFT-- 286 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 ++ K FI ++ F V++ S + + + ++ Sbjct: 287 -RTAPRKDKADRTFIVAALVFAVYYNLSGLAKTWVEQGVVAAVPGIW 332 >gi|15602062|ref|NP_245134.1| hypothetical protein PM0197 [Pasteurella multocida subsp. multocida str. Pm70] gi|12720420|gb|AAK02281.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] Length = 356 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 40/357 (11%), Positives = 113/357 (31%), Gaps = 3/357 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + + Y+ + I + + + +V ++ +I+ +++ V T + + + IP Sbjct: 2 MSTLDRYLGKSILGAIFATLIMLVGLSGIIKFVEQFRSVGKGTYDIWQAILYTVLTIPKD 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ +EL+++ +G SR+ + V+ A+ L I + Sbjct: 62 IETFFPMAALLGALIALGNLASRSELVVMQASGFSRLKIGFAVMKTALPLVILTMLIGEW 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + + +KA + ++ ++ + ++ K ++ + Sbjct: 122 GIPQTEQFARDMRSKAISGGSLLSVKNGIWAKDGNEFIYI--KRITDDIALSDVYIYRFA 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + IL+ S + L Sbjct: 180 ENRQLQQVKHANTATYQEGKWILHRLTESAISENEITTVNRVNAEWQTNLTPDKLGIASL 239 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + ++S L N + + + + ++L Q L + ++++ Sbjct: 240 RPTSLSISGLSN-YITFLRETGQESKKFELTYWRKLFQPLSVGVMMMLALSFIFGPLRSV 298 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I F V + + L + + + L+ +K+ Sbjct: 299 TAGARIVTGICFGFLFYVVNEIFGPLSLVYNVTPLAGALMPSVLFLLITWWLLSRKR 355 >gi|253991457|ref|YP_003042813.1| inner membrane protein yjgp [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782907|emb|CAQ86072.1| inner membrane protein yjgp [Photorhabdus asymbiotica] Length = 366 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 52/361 (14%), Positives = 137/361 (37%), Gaps = 19/361 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + N+++ + G +P + Sbjct: 2 IIIRYLVRETLKSQVAILFILLLIFFCQRLVEILGAAVEGNVPANLVISLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + + +E+ ++ G + L+ L LA+L S ++ + Sbjct: 62 LILPLSLFLGVLMTFSKLYTESEITVMHACGLGKRVLVVSALILALLTSALAAVNVIWMM 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +Q+ A A+ + + + E F +D + + + +F+ R Sbjct: 122 PWSSKYQEQVLADARANPSLAAIMEGKFKPSNDGNLVLYIGSVHGDKFKNVFLAQLRPVD 181 Query: 183 T--HKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + G + +Q +ILN G + + + +D I +F Y S Sbjct: 182 NQRPSVVISDGGHMVERPDGKQVVILNHGTRYEGTAMLRDFRITEFNDYQAVVGHQASVV 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 K ++++ L N + R+EFH RLT L +I ++ Sbjct: 242 DGDKVEQKSIAQLWRDNDKDS----------RAEFHWRLTLVLSVLIMAMM---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ ++ + ++ + F S + + P+++++ + + L ++ Sbjct: 289 VNPRQGRVLSMLPAMLLYLIFFLLQSSLRSNGGK-GKLDPLIWMWTVNGAYLMLALVLNI 347 Query: 358 Y 358 + Sbjct: 348 W 348 >gi|254527024|ref|ZP_05139076.1| unclassified ABC-type transport system permease [Prochlorococcus marinus str. MIT 9202] gi|221538448|gb|EEE40901.1| unclassified ABC-type transport system permease [Prochlorococcus marinus str. MIT 9202] Length = 401 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 54/377 (14%), Positives = 131/377 (34%), Gaps = 27/377 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQ-ILQRINLVSSSTESLNILLKISGYLIPTVL 61 + ++L I + + I+ + + I + L + LK+ + +P+ L Sbjct: 25 LIDRWLLGQIIPPMVFAISAFTVISLSVGVMFDLIRKIVEYGLPLFLALKVLFFSLPSFL 84 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + T ++ N+ELL + + G +I P + L+I ++ F + + Sbjct: 85 VLSFPMAVLLSTLLAYGKLSSNSELLALKSLGIKTSRIIAPAIALSIFMTGLTFYFNDNL 144 Query: 122 EPKCRS-----------------TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKY 164 PK K+ ++ + + +I +++ Sbjct: 145 VPKSNKLAEATLRAGIGSSFSEEEGKENIMFSRYGSRINASTKKPTKNNSKLTHIFYAQW 204 Query: 165 NPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK 224 N ++ + ++D +I A S D + I + G + +P + + +KFK Sbjct: 205 YKNKLMENVTLLDFSREDLQQILKADSARFDKKNSSWIFSKGSIVSITPSGQTTN-IKFK 263 Query: 225 SYTLQT--ESANSSTIVLKANDQNLSFLLNPNPNNPNYRP-ELLETYRSEFHKRLTQWLF 281 YT + + AN+ L + + + + ++ T Sbjct: 264 EYTYPFVEGPMELAKVPKDANEMTLKQAIQAEKIYKKTGNIKEVRRIKVRIQEKFTLPFA 323 Query: 282 PVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL 341 ++FGLI + K +S+ + +++ S+I + Sbjct: 324 CLVFGLIGSSLG--SKSNLRSSKSQGFGLSVIL-ILIYYVMSFIFSSFGVKGILPAVFAA 380 Query: 342 FLFCISSI--FLLMIKK 356 +L + S+ + +++K Sbjct: 381 WLPVLISLGGGIYLLRK 397 >gi|312170935|emb|CBX79194.1| beta-lactamase/D-alanine carboxypeptidase ampH [Erwinia amylovora ATCC BAA-2158] Length = 358 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 41/355 (11%), Positives = 117/355 (32%), Gaps = 2/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + + + +V ++ +I+ + ++ ++ + +P + + Sbjct: 5 LDRYIGKTIFNTIMATLFMLVSLSGIIKFVDQLRKTGQGEYTVLGAGLYTLLSVPKDIEI 64 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L ++ + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 65 FFPMAALLGALLGLGTLAQRSELVVMQASGFTRMQIAASVMKTAIPLVLLTMAIGEFVAP 124 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+ + + + L+ + D+ + N + Sbjct: 125 QGEQMARNYRAQQLMGGSLLSTQSGLWAKDGDNFIFIERVRDDNQLSGISIYHFDPQRRL 184 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-DISIMKFKSYTLQTESANSSTIVLKA 242 + YA S + D++ L + S + + + + + L Sbjct: 185 KTVRYAASAKYNADKKLWELAQVDQSDLSDTQQINGNQTLSGEWKTSLTPDKLGVVSLDP 244 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 ++S L + ++ Y+ ++ Q L + L+++ Sbjct: 245 GALSISGLYS-YSKYLKQSGQMAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVSM 303 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P + L + +++K++ Sbjct: 304 GMRVVTGISFGFLFYVLDQIFGPLSLVYNIPPILGALLPSAAFFALSVAMLVKRR 358 >gi|119503287|ref|ZP_01625371.1| predicted Permease [marine gamma proteobacterium HTCC2080] gi|119460933|gb|EAW42024.1| predicted Permease [marine gamma proteobacterium HTCC2080] Length = 363 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 44/360 (12%), Positives = 112/360 (31%), Gaps = 20/360 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 LY+ R + L + + + + ++ + + + S ++LL + + +P+ Sbjct: 2 RIFLYLTRDVVTHTLAVAFVLFLVVFSGRFIKYLAEAAVGSLSADVLLPVMLFKLPSFFE 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L M +E++++ G S L +L + + + + Sbjct: 62 LILPLALFIAVLLSLGRMYAESEMVVLKACGISPSRLAVFLLVPGLFIMCLVAGLTMYLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI--VDSRD 180 P+ + ++L + A + F + ++ + + Sbjct: 122 PEGSARAQRLLDNPRNAEGLQLMAAGRFKSQRGGELVTYTERIDKAGVMHNVFVVEEQSG 181 Query: 181 TQTHKIYYAQSGSIDLD----RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 T ++ AQ I D R+ + L G + P + FK S Sbjct: 182 TDATQVTLAQEAEIITDSATNRRYLELRGGTRYSGVPGESAYEAVAFKRLGELIPEERDS 241 Query: 237 TI-VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + + + LL+ R+ R++ + +I++ Sbjct: 242 LRASTRIDATPTADLLS----------SDNPRKRATLWWRISLPFLVPVSVVIALAL--- 288 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 +R + + +L++ F + +E +L L L+ Sbjct: 289 SKTDARRGRYARLGPALALFLTYFLALTQARSLMESGSGPGAMLATHLMFSLVALFLLYW 348 >gi|293610039|ref|ZP_06692340.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292827271|gb|EFF85635.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 366 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 53/354 (14%), Positives = 121/354 (34%), Gaps = 14/354 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + + L+ + I ++++ + + +IL I GY +P L Sbjct: 2 IIRRYLVKQVVSTSLVVISLLTLIMMGGRLIKYFGVAAQGRLDASILFSIIGYRLPEFLT 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + V + + E+ +++ +G SR L + ++ + ++ +F + + Sbjct: 62 LILPLGFFIGLMLVFGRLYVDHEMAVLNGSGVSRHQLARLLIPMTLVYMVFQSVLMLWMT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++L+ + F + F S L+ IF + Sbjct: 122 PWGLREFEKLTTTQAVRTGFDLVRPREFISSGPYTIYAGSLSEDRKNLKDIFFYQRAAKE 181 Query: 183 THKIYYAQSGSIDLDR------QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + L G + P + +F+SY L+ E+ Sbjct: 182 DKPDVMILAKEATRVEVANDTANVVDLVQGRRYEIFPGQPKYTQAEFQSYRLRLENDKDV 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + L N+P RSE RL VI ++S+ ++ Sbjct: 242 KFESGDVEALSTTKLFSKTNDPV--------IRSELGWRLFGPFTIVIALMLSVALSEVS 293 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 + ++ P S + I K E + + P + + +++F Sbjct: 294 PRQGRYYRLIPAIFIFSSLIVLMIAIKTRISKEELDIWAYPAVLVVYGVAAALF 347 >gi|261819787|ref|YP_003257893.1| permease YjgP/YjgQ family protein [Pectobacterium wasabiae WPP163] gi|261603800|gb|ACX86286.1| permease YjgP/YjgQ family protein [Pectobacterium wasabiae WPP163] Length = 358 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 41/355 (11%), Positives = 109/355 (30%), Gaps = 2/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + + + +V ++ +I+ + ++ V S + +P + Sbjct: 5 LDRYIGKTIFTTIITTLFMLVSLSGIIKFVDQLRKVGQGEYSALGAGLYTLLSVPKDIET 64 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 65 FFPMAALLGALLGLGQLATRSELVVMQASGFTRLQIATAVMKTAIPLVLLTMAIGEWVSP 124 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + ++ + + L+ + +D + Sbjct: 125 QGEQMARNYRSQMISGGSMISTQGGLWAKDGNDFIYIERIVGDKELSGVNIYHFDEQNKL 184 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK-SYTLQTESANSSTIVLKA 242 + YA S D DR L+ + S + + + L+ Sbjct: 185 LSVRYAASAEFDKDRNVWNLSQVDESDLSDGKQIGGSQTLSGEWKTNLTPDKLGVVALEP 244 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 N ++ L + + Y+ ++ + + L+++ Sbjct: 245 NALSIRGL-HDYAKYLKQSGQESGRYQLNMWSKIFAPVSVAVMMLMAVSFIFGPLRSVSA 303 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I IS F + + + P + + + L++K++ Sbjct: 304 GSRIVIGISFGFFFYLLNEIFRPLSLVYGIPPILGAVLPSSVFLFISVALLLKRR 358 >gi|146308541|ref|YP_001189006.1| permease YjgP/YjgQ family protein [Pseudomonas mendocina ymp] gi|145576742|gb|ABP86274.1| permease YjgP/YjgQ family protein [Pseudomonas mendocina ymp] Length = 372 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 42/351 (11%), Positives = 112/351 (31%), Gaps = 25/351 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + + ++ I + ++ + + +L I GY IP L Sbjct: 2 IVFRYLSREVLVTLSAVSAVLLVIIMSGRFIKYLAQAAQGALDPGVLFLIMGYRIPGFLQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + ++E+ ++ TG S+ L + A+++++ + + Sbjct: 62 LILPLGLFLGFLLAYGRLYLDSEMTVLSATGVSQQRLTAYSMAPALIVALLVGWLSLGLA 121 Query: 123 PKC--------RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF 174 P+ + F +++ +L S+ + F Sbjct: 122 PQGVASVARILNEQDALTELDTLVPGRFQSMKDGSRVTYSQELSADRSELRGVFMSEKRF 181 Query: 175 IVDSRDTQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 D + + A+SG + + +IL +G + P D ++++ +Y + Sbjct: 182 SSDGSSERGITVLLAESGRQEIQADGSRYLILENGYRYDGEPGEADYRVIQYDTYGVLLP 241 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 + + L ++E RL+ L + L+++ Sbjct: 242 KPEVAIEASEREAMPTRELF----------GSDDPRVQAELQWRLSIPLLVFVVTLLAVP 291 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 + ++ + + ++ + + G P L L+ Sbjct: 292 L---SKVNPRQGRFLKLLPAIFLYMA-YLGLLIAARGALDKGRLPPALGLW 338 >gi|67924129|ref|ZP_00517574.1| permease YjgP/YjgQ [Crocosphaera watsonii WH 8501] gi|67854019|gb|EAM49333.1| permease YjgP/YjgQ [Crocosphaera watsonii WH 8501] Length = 400 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 45/373 (12%), Positives = 121/373 (32%), Gaps = 20/373 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRI-NLVSSSTESLNILLKISGYLIPT 59 + + YI + L S + + I L + + V S L +I +P Sbjct: 27 LSLMDRYIATQLINPLLFSVGLVSVLGVAIGYLSDLADKVVDSNLPLIQASEILLLKVPE 86 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 P + T ++ ++EL+ G S LI P + +++L++ F+ Sbjct: 87 FTAYALPISVMLSTLLTYGRLSSDSELIAFRGCGVSLYRLIIPAVVMSLLVTGVTFLVSE 146 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI------------KISKYNPN 167 ++ P + + + +++F+ + + + ++ Sbjct: 147 LVVPAANYRATGILVEYLQEEHPYWQNKDIFYPDYEQVVLPNGEKEKQLKHLFFAEKFDG 206 Query: 168 NTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 L+ + +++ + + ++I + S + + + +G +++ +P + F+ Sbjct: 207 QNLKNLTVLEWLENRLNRIVVSDSATWNGQEETWDFFNGTLYKLAPDASYKEADPFEHRQ 266 Query: 228 LQTESA--NSSTIVLKANDQNLSFLLNPNPNNPNY-RPELLETYRSEFHKRLTQWLFPVI 284 L A + + N+ + L T++ ++L V+ Sbjct: 267 LPLSKAAFEFALQGRDPYEMNIIQASQYMRILKMMGDDKKLRTFQVRIQQKLAFPFICVV 326 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL-YLFL 343 FG+I + +S+ I F + I + +L Sbjct: 327 FGVIGSSLGSTPQ---NMSRATGFGLSVVIIFAYYLLGFLIGSLGLMGLISPVLAGWLPN 383 Query: 344 FCISSIFLLMIKK 356 + ++ + Sbjct: 384 ILGLVMGGYLLYR 396 >gi|312959168|ref|ZP_07773687.1| permease YjgP/YjgQ [Pseudomonas fluorescens WH6] gi|311286938|gb|EFQ65500.1| permease YjgP/YjgQ [Pseudomonas fluorescens WH6] Length = 372 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 46/365 (12%), Positives = 119/365 (32%), Gaps = 25/365 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + + ++ I + ++ + +S L I G+ +P L Sbjct: 2 IVFRYLSREVLLTLSAVSAVLLVIIMSGRFVKYLAQAASGALDPGSLFLIMGFRLPGFLQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ TG S+ L+ + A +++ + + Sbjct: 62 LILPLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLLGMTMIPAAGVALVMAWLSLSLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P+ + L K F LE F L+D + ++ ++ + S+ Q Sbjct: 122 PQGAMQFQLLLNKQDAMTEFDTLEPGRFQALNDGTRVTYTETMTDDRANLGGVFISQKNQ 181 Query: 183 THKIYYAQSGSIDLDRQAI----------ILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 + D +L +G + SP D +K+ +Y + Sbjct: 182 GENQKDRGISILVADSGRQEVRPDGSRYLVLENGYRYDGSPGLADYRAIKYDTYGVMLAR 241 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + S V + + L +E R++ L I L+++ Sbjct: 242 PDISEEVTDRDALPTASLF----------GSQELRSIAELQWRISLPLLVFIVTLMAVPL 291 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIF 350 + ++ + + ++ + +Y + + P + + ++ ++ Sbjct: 292 ---SRVNPRQGRFLKLLPAILLYMTYLTLLTYARGWLENGKTPLVLGLWWVHAIFLTVGL 348 Query: 351 LLMIK 355 L+ Sbjct: 349 ALLYW 353 >gi|237799874|ref|ZP_04588335.1| hypothetical protein POR16_13650 [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022729|gb|EGI02786.1| hypothetical protein POR16_13650 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 353 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 42/329 (12%), Positives = 98/329 (29%), Gaps = 4/329 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + + L I+ + + + + + + T +L L P Sbjct: 1 MVKLDRYIGKSVFLAILAVLGIILGLVSLFAFIDEMGDI-NDTYTLADALSYVFMTAPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L S+ ++EL I+ G S ++ V+ + L + + Sbjct: 60 VYDTLPMAALIGCLIGLGSLASSSELTIMRAAGVSIGRIVWAVMKPMLFLMVAGVLVGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + AQ + L+ R D+ + L Sbjct: 120 VAPYAENQAQAARSLAQGSGDAQSARHGLWHRQGDEFIHINTVQPNGLMLGVTRYRFDDQ 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 +A+ D L D + S + + + + ST+++ Sbjct: 180 RHMLTSSFAKEAHFKTD--YWELKDVSTTHFNEGSTQVINTPEERWDVSLSPQLLSTVIM 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 ++S L + + Y F ++ Q V L++I Sbjct: 238 PPESLSISGL-WSYAHYLADQGLSNGRYWLAFWTKVLQPAVTVALVLMAISFIFGPLRSV 296 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKI 329 + + + +F + + Sbjct: 297 TLGQRVFTGVVVGFTFRIIQDLLGPSSLL 325 >gi|292486866|ref|YP_003529736.1| beta-lactamase/D-alanine carboxypeptidase ampH [Erwinia amylovora CFBP1430] gi|292900737|ref|YP_003540106.1| permease [Erwinia amylovora ATCC 49946] gi|291200585|emb|CBJ47716.1| putative permease [Erwinia amylovora ATCC 49946] gi|291552283|emb|CBA19320.1| beta-lactamase/D-alanine carboxypeptidase ampH [Erwinia amylovora CFBP1430] Length = 358 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 40/355 (11%), Positives = 115/355 (32%), Gaps = 2/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + + + +V ++ +I+ + ++ ++ + +P + + Sbjct: 5 LDRYIGKTIFNTIMATLFMLVSLSGIIKFVDQLRKTGQGEYTVLGAGLYTLLSVPKDIEI 64 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L ++ + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 65 FFPMAALLGALLGLGTLAQRSELVVMQASGFTRMQIAASVMKTAIPLVLLTMAIGEFVAP 124 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+ + + + L+ + D+ + N + Sbjct: 125 QGEQMARNYRAQQLMGGSLLSTQSGLWAKDGDNFIFIERMRDDNQLSGISIYHFDPQRRL 184 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + YA S + D++ L + + + + + L Sbjct: 185 KTVRYAASAKYNADKKLWELAQVDQSDLSDTQQINGNQTLSGEWKTSLTPDKLGVVSLDP 244 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 ++S L + ++ Y+ ++ Q L + L+++ Sbjct: 245 GALSISGLYS-YSKYLKQSGQMAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVSM 303 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P + L + +++K++ Sbjct: 304 GMRVVTGISFGFLFYVLDQIFGPLSLVYNIPPILGALLPSAAFFALSVAMLVKRR 358 >gi|158425948|ref|YP_001527240.1| permease precursor [Azorhizobium caulinodans ORS 571] gi|158332837|dbj|BAF90322.1| permease precursor [Azorhizobium caulinodans ORS 571] Length = 363 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 46/357 (12%), Positives = 102/357 (28%), Gaps = 15/357 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSST-ESLNILLKISGYLIPTV 60 ++ Y R S M V + ++ L+ + S + ++ Y P Sbjct: 4 RTLGFYFARRFFASVTMIFFSCVGLIMLVDFLEMARRTADRDTVSAVTVALLTIYRTPAF 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + PF +++R EL++ G S P L +A L+ +F N Sbjct: 64 TEQLLPFAVLFGGMATFVTLSRKLELVVARAVGLSVWQFTSPALLVAFLIGVFATCVFNP 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSY------LEENLFFRLDDDLYIKISKYNPNNTLQGIF 174 + + ++ A+ + + + + L G+ Sbjct: 124 VSADFKERANRMEAEIFNTASGVFTQGTSGFWIRQQSVDGQAIIQAAASQQGGRQLTGVT 183 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + + +I D + + R D + + + Sbjct: 184 VFEFDRNGKLTDRVEAKSAILGDGYWTM----KEARVLVPGSDQQTFETYLLATKLDPKQ 239 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 ++ + L + +N YR + L + V LI+ V Sbjct: 240 IQESLVSPETVSFWQLPDA-ISNAEQSGFGAARYRLQLQSLLARPFLLVAMVLIAAVVGL 298 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + R I + F ++ G + + + PI + ++ IF+ Sbjct: 299 --RVFRFGGVGQTILGGVLAGFLLYLG-TKLAEDLGDAGVVHPIAAAWFPALAGIFM 352 >gi|54307698|ref|YP_128718.1| putative permease [Photobacterium profundum SS9] gi|46912121|emb|CAG18916.1| putative permease [Photobacterium profundum SS9] Length = 366 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 51/363 (14%), Positives = 127/363 (34%), Gaps = 21/363 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R +S L + + + ++ + + + +++L + G +P++ Sbjct: 2 IIVRYLTRETLKSQLAVLFVLFLVFISQKFIRILADATDGSIPGDLILTLMGLYMPSMAL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L LA++ + + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIQAALLLAMITGSVAAFNSLWLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD----LYIKISKYNPNNTLQGIFIVDS 178 P Q+ + + + L + F D I+ + + + Sbjct: 122 PWSSEQETQVMERVESDVGLDLLVKGQFQPAPDGKGVVFVNDITDKGSKLEKVFVAQIVA 181 Query: 179 RDTQTHKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 RDT + A+ G +D RQ + L DG + P D S+ +F++Y Sbjct: 182 RDTMRPSVMVAERGYVSELDDGRQVLDLKDGTRYEGVPTRLDYSVTEFENYQALIGQRAI 241 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + L+ + R+EF R++ +L L+++V Sbjct: 242 REKNRDWDALPTPTLMQHSELAA----------RAEFQWRISMFL---CIPLLTMVVVPL 288 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 ++ ++ + +F ++ I F S + ++ + L+ + + + Sbjct: 289 SSVNPRQGRFAKLFPAVLIYLVYFLAISAAKSAV-EDGSLPSYIGLWSINAAMFVVAIAL 347 Query: 356 KKY 358 + Sbjct: 348 NSW 350 >gi|262280663|ref|ZP_06058446.1| conserved hypothetical protein [Acinetobacter calcoaceticus RUH2202] gi|262257563|gb|EEY76298.1| conserved hypothetical protein [Acinetobacter calcoaceticus RUH2202] Length = 366 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 51/354 (14%), Positives = 118/354 (33%), Gaps = 14/354 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + + L+ + I ++++ + + IL I GY +P L Sbjct: 2 IIRRYLVKQVVSTSLVVISLLTLIMMGGRLIKYFGVAAQGRLDAGILFSIIGYRLPEFLT 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + V + + E+ +++ +G SR L + ++ + ++ + + + Sbjct: 62 LILPLGFFIGLMLVFGRLYVDHEMAVLNGSGVSRHQLARLLIPITLVYMVCQSVLMLWMT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++L+ + F + F S L+ IF Sbjct: 122 PWGLREFEKLTTTQAVRTGFDLVRPREFISSGPYTIYAGSLSEDRKNLKDIFFYQRAAKA 181 Query: 183 THKIYYAQSGSIDLDR------QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + L G + P + +F+SY L+ E+ Sbjct: 182 DKPDVMILAKEATRVEVANDTANVVDLVQGRRYEIFPGQPKYTQAEFQSYRLRLENDKDV 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + L N+P RSE RL +I ++S+ ++ Sbjct: 242 KFESGDVEALSTTKLFSKTNDPV--------VRSELGWRLFGPFTIIIALMLSVALSEVS 293 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 + ++ P S + I K E + + P + + +++F Sbjct: 294 PRQGRYYRLIPAIFIFSSLIVLMIAIKTRISKEELDIWAYPAVLVVYGIAAALF 347 >gi|325269119|ref|ZP_08135739.1| hypothetical protein HMPREF9141_0948 [Prevotella multiformis DSM 16608] gi|324988506|gb|EGC20469.1| hypothetical protein HMPREF9141_0948 [Prevotella multiformis DSM 16608] Length = 405 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 50/359 (13%), Positives = 119/359 (33%), Gaps = 8/359 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPTVL 61 + YI+R +++ + L I+ IA V + ++ + I+ IP Sbjct: 47 ILDWYIIRKFIGTYIYAILLIISIAIVFDFNENLSKFTQYHAPWRAIVFDYYANFIPYYS 106 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + +P + + + N+E++ + G S L++P + +L++ F + + Sbjct: 107 NLFSPLFVFIAVIFFTSKLAGNSEIIAMLAAGVSIKRLMRPYMISCVLIAGLTFYLNSFV 166 Query: 122 EPK---CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 P R + L ++ + ++ + + ++Y + I D Sbjct: 167 IPHGTVIRQNFESLYRNSKKNTSAENVQLYVSKNTTAYIQHYDNQYKRGYGFSLVKIKDK 226 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + Q ++ + L++ + + + I K L E + Sbjct: 227 KIVSHMTAMEIQYDTVADTKFHWRLSNWKTRTLKGLKEHIQSGASKDTVLLMEPTDLVYS 286 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + LL+ + + Y EFHKR+ I +I + + Sbjct: 287 KGQQETFTSPELLDYISKQTSRGSGNVVQYEVEFHKRIAMSFSSFILTIIGLSL---SSR 343 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 R+ + I L++SF + + P+L ++ I + + Sbjct: 344 KRKGGMGLYLGIGLALSFS-YIMLQTVSSTFAIQSDTPPLLAAWIPNIIFAVIAYFCYR 401 >gi|253686792|ref|YP_003015982.1| permease YjgP/YjgQ family protein [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251753370|gb|ACT11446.1| permease YjgP/YjgQ family protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 371 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 54/354 (15%), Positives = 131/354 (37%), Gaps = 15/354 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N+++ + G +P ++ Sbjct: 2 IIIRYLVRETFKSQLAILFILLLIFFCQKLVRILGAAVDGEIPTNLVISLLGLGVPEMVQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ G + L+K L LA+ ++ I+ + Sbjct: 62 LILPLSLFLGVLMTFGRLYAESEITVMHACGLGKRVLLKAALALAVFTAVIATINVMWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +++ A+A+ + L E F + + Q +F+ R + Sbjct: 122 PWSSRHQEEVLAEAKANPGMATLVEGQFQSAQGGNAVLFVGNVKGSEFQHVFLAQLRPSG 181 Query: 183 T--HKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A G I + Q + L++G + + + +D I F +Y + + Sbjct: 182 NARPSVVVADRGHIKQNEDGAQVVTLDNGSRYEGTALLRDFRITDFTNYQAVIGHQSVTL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 ++ L + + ++ R+EFH RLT L +I L+ + + Sbjct: 242 NNSDVQQMDMQTLWHSDAHDA----------RAEFHWRLTLILSVLIMALMVVPLSVVNP 291 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + + P + I F + K + +P L ++ ++ L Sbjct: 292 RQGRVLSMLPAMLLYLIFFLLQSSLRSNASKGKIDPMVWVWLTNLMYFGIAVML 345 >gi|215489604|ref|YP_002332035.1| predicted inner membrane protein [Escherichia coli O127:H6 str. E2348/69] gi|215267676|emb|CAS12134.1| predicted inner membrane protein [Escherichia coli O127:H6 str. E2348/69] Length = 360 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 45/355 (12%), Positives = 115/355 (32%), Gaps = 3/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ V ++ +I+ + ++ + + +P + + Sbjct: 7 LDRYIGKTIFTTIMMTLFMQVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQI 66 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 67 FFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAP 126 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+A + ++ L+ + ++ + + + Sbjct: 127 QGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNENRRL 186 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + YA + D + + L+ + +P S ++ + L Sbjct: 187 QSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVVALDP 246 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++ L N + Y+ ++ Q L + L+++ Sbjct: 247 DALSIRGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPM 305 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P I L L I L ++ +K Sbjct: 306 GVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGAL-LPSASFFLISLWLLMRK 359 >gi|229527563|ref|ZP_04416955.1| hypothetical protein VCG_000632 [Vibrio cholerae 12129(1)] gi|229335195|gb|EEO00680.1| hypothetical protein VCG_000632 [Vibrio cholerae 12129(1)] Length = 349 Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 51/347 (14%), Positives = 114/347 (32%), Gaps = 19/347 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + ++ + S +++L I G +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASDGEIPTSMILSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LA++ + + + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + L + + L++ F R D + N L +F+ Sbjct: 122 PWSQDKEAHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLYNVFVAQLAPRD 181 Query: 183 THK-----IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + + RQ I L +G + P D I F SY + Sbjct: 182 SILPSVMFSHSGDVKELSDGRQIITLYEGTRYEGVPTRVDYMITNFDSYDGLIGQREVKS 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 LLN ++E R++ V L++++ A Sbjct: 242 AERDWEALPTLSLLN----------NADRRAQAELQWRISL---VVCIPLLTMLVVPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 + ++ + + ++ I F S I ++ I+ L+ Sbjct: 289 VNPRQGRFAKMGPAILIYLTYFLALSATKSAI-EDGSLPVIIGLWPI 334 >gi|219871563|ref|YP_002475938.1| permease [Haemophilus parasuis SH0165] gi|219691767|gb|ACL32990.1| permease, inner membrane protein yjgP [Haemophilus parasuis SH0165] Length = 366 Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 50/354 (14%), Positives = 123/354 (34%), Gaps = 15/354 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + I +S + ++ I + Q+++ ++ S +++L + G +PT+ Sbjct: 2 ILSRYLTKEIFKSQIAILFILLVIFFCQQLVRVLSSAVSGKVPTDLVLSLLGLGMPTMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L +E+ ++ G + L+K LFL+I + + + Sbjct: 62 LMLPLSLFIALLLTLGRFYAESEITVMRACGVGQSLLVKAALFLSIFTTAVAVYNVFWLT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + ++ A+A+ F+ L F + + + +F + + Sbjct: 122 PWAINKQSEMLAEAKANPRFAALAAGQFMSAGGYVLFIDNIKDNTINDIYVFQPEQQKKN 181 Query: 183 THKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + A+SG + Q + L + + +P + D I F +Y + + Sbjct: 182 KPSVVVAKSGELQGLPNGDQMLNLTNSTRYEGTPQTADFRISHFDNYNAYLGYQDVDSDE 241 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + LL+ ++E RL L + L+++ + Sbjct: 242 KLVQRADFQKLLSE----------TSPEAQAELQWRLALILSVPLMALLAVPMSSVNPRQ 291 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + K+ P + I F + + N ++ + + L+ Sbjct: 292 GRFAKLLPALLLYLIYFLLQSSLKSAGASGKLNVSL--LMPMVSVAFLVLGTLL 343 >gi|56461047|ref|YP_156328.1| permease [Idiomarina loihiensis L2TR] gi|56180057|gb|AAV82779.1| Predicted permease [Idiomarina loihiensis L2TR] Length = 363 Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 52/359 (14%), Positives = 115/359 (32%), Gaps = 20/359 (5%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 ++ +S L ++ I + ++ ++ S I+ ++ +P +L ++ P Sbjct: 1 MISETLKSQLAVLFILMTIFVSQKFVRVLSDASEGDIPGAIIFQLLSLNLPALLSLILPL 60 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 + + + E+ ++ G S + + L L+++L+I + P Sbjct: 61 SLFLGILLAHGRIYADNEMTVLHACGVSEWYVTRVTLVLSLILAIITASFTLWLVPWSLD 120 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT---- 183 ++L KA+ + L F + + + + + V Sbjct: 121 QEQKLEDKARSESGLTALMPGRFQQASNQKAVIFVQRVGDEGDLEEVFVAQHTHNQGELQ 180 Query: 184 --HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + I + L G+ R + +M F SY LQ + +S + K Sbjct: 181 SGSVVMAKTGKVISETTGSQWLELGQGKRYAGDDDSYQMMSFDSYQLQIKEQQASEQLRK 240 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 LL+ +E R+ L L++++A + + Sbjct: 241 LEAYPTVELLS----------RKEPAAIAELQWRIAIPL---AMPLLTLIAVPLSRVNPR 287 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFLLMIKKKYT 359 + K + +L I G F I I L+ F + L ++ K Sbjct: 288 QGKFGRMAPALLIYLGYFLLLMAAKSAIRDGVIPPIIGLWWIHFILLIFGLALVGKGRP 346 >gi|188532529|ref|YP_001906326.1| Inner membrane protein [Erwinia tasmaniensis Et1/99] gi|188027571|emb|CAO95418.1| Inner membrane protein [Erwinia tasmaniensis Et1/99] Length = 358 Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 42/355 (11%), Positives = 116/355 (32%), Gaps = 2/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + + + +V ++ +I+ + ++ ++ + +P + + Sbjct: 5 LDRYIGKTIFNTIMATLFMLVSLSGIIKFVDQLRKTGQGEYTVLGAGLYTLLSVPKDIEI 64 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L ++ + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 65 FFPMAALLGALLGLGALAQRSELVVMQASGFTRMQIAASVMKTAIPLVLLTMAIGEFVAP 124 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+ + + + L+ + D+ + + D + Sbjct: 125 QGEQMARNFRAQQLVGGSLLSTQSGLWAKDGDNFVFIERIRDDSQLSGISIYSFDHDRRL 184 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-DISIMKFKSYTLQTESANSSTIVLKA 242 + YA S + D++ L + + + S + + L Sbjct: 185 QTVRYAASAKYNADKKLWELAQVDQSDLTDAQQIKGSQTLSGEWKTTLTPDKLGVVALDP 244 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 ++S L + ++ Y+ ++ Q L + L+++ Sbjct: 245 GALSISGLYS-YSKYLQQSGQMAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVSM 303 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P + L ++IK++ Sbjct: 304 GMRVITGISFGFLFYVLDQIFGPLSLVYNIPPVLGALLPSAAFFVLSVAMLIKRR 358 >gi|94263394|ref|ZP_01287208.1| permease YjgP/YjgQ [delta proteobacterium MLMS-1] gi|93456230|gb|EAT06364.1| permease YjgP/YjgQ [delta proteobacterium MLMS-1] Length = 359 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 45/342 (13%), Positives = 106/342 (30%), Gaps = 6/342 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y++ GR+ ++ I ++ +R++ + ++ IP + Sbjct: 1 MKLLDRYLITSFGRNLATVLGGLLAIYLLVDFFERVDNFLDAGLGTGGAVRYLLLKIPLI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + L +NR EL+ + G S +I+P+L A ++ S Sbjct: 61 IEQLLPVALLLAGIITLGLLNRRHELMALQAAGLSTRRIIRPLLLAAFACTLLGMASSQW 120 Query: 121 IEPKCRST-IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P S + + + + + + + F + Sbjct: 121 LLPPTMSELNRLWHQEVRQQENRGIERQGRIYYRGQEGIYSFRPAADSENRLADFSYLTW 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS--T 237 D + D + +L +G++ K+ D + F+ L + Sbjct: 181 DRDYRLAQLIFAARATWDGRKWLLEEGQLKEKANGDDDFVVDYFERRQLALPEEPADFFI 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +++ LS L + + R +++ + LI I + Sbjct: 241 PPYALSERALSTLFS--QATASADTPQRRQARLAIQHKISYIFLGLPLLLIGIPLLLAMS 298 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL 339 R + + + S + WG + P + Sbjct: 299 RGR-GRDLALAIPAASFLAFITWGLWSFGQSLAAAGQLPPFV 339 >gi|116327483|ref|YP_797203.1| permease [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116331903|ref|YP_801621.1| permease [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116120227|gb|ABJ78270.1| Permease [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125592|gb|ABJ76863.1| Permease [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 386 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 39/364 (10%), Positives = 108/364 (29%), Gaps = 13/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K + Y+ + F+ + + + I + + + +++ + Y +P + Sbjct: 25 LKILDRYLFGEFFKVFIGTVVLLTGIMLLSLVNDNMRNFTTTKAPRYHVALFLVYSLPKI 84 Query: 61 LPM-VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + V + + N EL+ + G S ++ P++ IL+ I + Sbjct: 85 ISTTVVSMSLMFSICFTVGQFSVNKELVSMMAAGVSFFRIVAPLILFGILMWIVMLFVTE 144 Query: 120 IIEPKCRSTIKQLSAKAQLAL---TFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 +I K + S + ++ + +I Sbjct: 145 LIVRPVNKLAKIEHDILTEGMGTLANSVYQFHVKGKEGFYYLYFYDPNKDEINGGFNYIR 204 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS- 235 D + + + + + + E K S F+ + + Sbjct: 205 LRNDGSPETVISSLKAKYNYETKLWKMKKVEEWHFDNDLKLSSQESFEEKEYELPEDPTY 264 Query: 236 -STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + NL L + +E H + +I LI +A Sbjct: 265 FKIPAGSVEEMNLFQLKEEEKRR-IQKGLSYGDVLTEKHSVFALPMMTIIVTLIGTIA-- 321 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI--LYLFLFCISSIFLL 352 ++ + + I++ + +++ F+ + +N P +++ + Sbjct: 322 -GYFTKKTAGVASLGITIGVV-LIYYIFNSAGKSLGENGVIPPFVGVWITPSLFLGLCFW 379 Query: 353 MIKK 356 M ++ Sbjct: 380 MFRR 383 >gi|260592209|ref|ZP_05857667.1| putative membrane protein [Prevotella veroralis F0319] gi|260535843|gb|EEX18460.1| putative membrane protein [Prevotella veroralis F0319] Length = 405 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 49/361 (13%), Positives = 121/361 (33%), Gaps = 8/361 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 + + YI++ +++ + L I+ IA V + ++ + I+ IP Sbjct: 45 LGILDWYIIKKFIGTYIYAILLIISIAIVFDFNENLSKFTQYHAPWRAIIFDYYANFIPY 104 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + G S L++P + ++++ F + Sbjct: 105 YSNLFSPLFVFIAVIFFTSKLAGNSEIIAMLAAGVSIKRLMRPYMLSCVVIAGLTFYLNS 164 Query: 120 IIEPK---CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + P R + L ++ + ++ + + +Y + I Sbjct: 165 FVIPHGTVIRQNFETLYRNSKKNTSAENVQLFVAKNTTAYIQNYDDQYKRGYGFSLVKIK 224 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + Q +I + L++ ++ + + I K L E + Sbjct: 225 NKKIVSHLTAMEIQYDTIADSKYHWKLSNWKIRTLKGLKEHIQSGTTKDTVLLMEPTDLV 284 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + LL+ + + Y EFHKR+ I +I + Sbjct: 285 YSKGQQETFTSPELLDYISKQTSRGSGNVVQYEVEFHKRIAMSFSSFILTIIGLAL---S 341 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + R+ + I L++SF + Q+ P+L ++ I + Sbjct: 342 SRKRKGGMGLSLGIGLALSFSYIMLQTVSATFAIQDNT-PPVLAAWIPNIIFAIIAYFCY 400 Query: 357 K 357 + Sbjct: 401 R 401 >gi|237745417|ref|ZP_04575897.1| permease YjgP/YjgQ family protein [Oxalobacter formigenes HOxBLS] gi|229376768|gb|EEO26859.1| permease YjgP/YjgQ family protein [Oxalobacter formigenes HOxBLS] Length = 382 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 43/382 (11%), Positives = 110/382 (28%), Gaps = 26/382 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y I +S + + + + ++ ++ V L+ + P Sbjct: 1 MKILQRYFFSQIVKSVVFILVAFLGLFAFFDLISELSSVGRGGYQLHHVFVYILLGFPGY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + PF + T + N+E I+ + S + + ++ +F F+ + Sbjct: 61 IYELMPFAVLIGTIYAMALFASNSEFTIMRVSSLSTRDACWMLAKVGLVFLVFTFLVGEV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + ++ + + + + + + Sbjct: 121 LTPYTSRMASEFRNNLIGRNLSDKFRTGMWSKDTIRENGREGEIIGSRFMNIKTMRPDGT 180 Query: 181 TQTHKIYYAQS----------GSIDLDRQAIILNDGEVHRKSPISKDISIMKFK------ 224 + K+Y + +G V S +F Sbjct: 181 IEQIKLYEFNRELELVKTVTAQNGHYLGNHEWQLNGVVESLIKSSGKSKGKRFPDSAPVV 240 Query: 225 --------SYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRL 276 S I + AN + L + + +Y+ F K++ Sbjct: 241 DTEKRDSIRLVSDVTPDILSVISVDANKMSAYEL-AVYNRHLVENKQDATSYQIAFWKKI 299 Query: 277 TQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYY 335 + +++ A I + ++F + FS++ P+ Sbjct: 300 IYPFSVFVMMALALPFAYLHFRSGGVSLKIFTGIMIGVAFILINNLFSHVGLLNTWPPFL 359 Query: 336 IPILYLFLFCISSIFLLMIKKK 357 ++ LF +S++F L ++ Sbjct: 360 TAVIPSVLFLLSAVFALWWVER 381 >gi|304311789|ref|YP_003811387.1| Predicted permease YjgP/YjgQ family [gamma proteobacterium HdN1] gi|301797522|emb|CBL45742.1| Predicted permease YjgP/YjgQ family [gamma proteobacterium HdN1] Length = 369 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 48/365 (13%), Positives = 120/365 (32%), Gaps = 22/365 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + + L +V I + ++ + + + ++ + Y +P L Sbjct: 2 IIYRYLSRQLLVTTLAVTGVLVLILMGGRFIKYLGGAADGVLTGALIFWVMLYKLPGFLE 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSR----ITLIKPVLFLAILLSIFLFISE 118 ++ P + M E+++++ G SR + P L A+++ Sbjct: 62 LILPLGLFLGILLSYGRMYLENEMVVLEACGMSRGALVKHTLMPALCTALIVGFIANYVS 121 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 + K ++ + + K+ L L + I + I + Sbjct: 122 PLCNTKAQTMLDEQKRKSALELLSPGQFHATRNAMTVTYIEDIDGKHKEMQNLFIVNYNQ 181 Query: 179 RDTQTHKIYYAQSGSIDLDR----QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + + +I A+ G + + +++ +G S + F Y L+ + Sbjct: 182 ANPEKIEITRAKRGDYQIHEDTGARYLVMKEGYRFEGSAGMAKFNRTAFDVYQLKLDPPR 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 I + + + L+ R+E R+ + I I+ +A Sbjct: 242 PLEIEGQYTLMSDAQLVLE----------GSLAARAELQWRMALPVLVPI---IAYLAVI 288 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + ++ + + S+ + + +KI + P L L+ I+ L + Sbjct: 289 LSKVNPRQGRYMKLLPSIVLYLVYLSLLLAVKNKIAK-GKMDPELSLWAVHIAFFLLAVF 347 Query: 355 KKKYT 359 K++ Sbjct: 348 MHKWS 352 >gi|33151746|ref|NP_873099.1| hypothetical protein HD0552 [Haemophilus ducreyi 35000HP] gi|33147967|gb|AAP95488.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP] Length = 360 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 53/358 (14%), Positives = 123/358 (34%), Gaps = 5/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E YI + I L + ++I++++ V + ++P+ Sbjct: 6 MNILERYIGKTIIMMMFAVLLMSSGLVFIIKLVEEFKNVGEGNYDALTATYYALLMLPSD 65 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+++ ++EL+++ +TG SR + V+ AI + I + Sbjct: 66 IKEFVPVVLLIGGLLGLSNLASHSELVVMQSTGFSRFRIGLAVMKTAIPIIILTMSASEW 125 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I PK + + F+ D + ++ I + L I I + Sbjct: 126 IIPKV-EQFARNMRSVAQSGGSMLSTNGGFWAKDGNNFLYIRHIENEHQLNNISIYHFEN 184 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + A S + + L + + + + +++ + + L Sbjct: 185 KVLTSVSQADSALF--NGKDWTLQNLQTATITDHGIQTTHQANQNWQTTITPSKLGIVSL 242 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K +++ L + + + + ++ F +++ Q + + L++I Sbjct: 243 KPESLSIAGLAD-YVSFLTETGQDSKRFQIAFWRKVYQPISMAVMMLLAISFIFGPLRSS 301 Query: 301 QRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I I F V F + P I L L C++ ++ L+ KK+ Sbjct: 302 AMGTKLFIGIIAGFIFYVSNIVFGNMTLVFSWLPIAIGALIPSLICLAIVWWLLTKKR 359 >gi|315223961|ref|ZP_07865805.1| permease YjgP/YjgQ family protein [Capnocytophaga ochracea F0287] gi|314946065|gb|EFS98070.1| permease YjgP/YjgQ family protein [Capnocytophaga ochracea F0287] Length = 358 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 45/360 (12%), Positives = 119/360 (33%), Gaps = 3/360 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL+ +F M + + I ++ + ++++ + +N +L I Sbjct: 1 MKILDWYILKRYLLTFFMMIILFIPIGIIVDLSEKVDKMIQKGAPMNEILWYYLSFIVYF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + + + NTE++ I ++G S + ++P + A ++S+ +F Sbjct: 61 ANILFPILLFLSIIWFTSKLANNTEIIAIQSSGVSYMRFLRPYIVGASIISVIVFFMGMF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + K + + + D+D S + + Sbjct: 121 IVPAASTVYNDFWNKYIRSSKVESVSDLYNQFSDNDYLYVSSFNYQDKRGYNFSVEHFDG 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + A++ + L + + I + + + Sbjct: 181 IKMTEKINAETIQWIDSTKTYRLTNYSKRKIGEGDDVIVKRDQLDTIFNFKPDDLMPMEY 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 A ++NL L L Y ++R I LI + ++ + Sbjct: 241 TAENKNLFELNKFIEREKMKGSPNLNMYLLVKYRRWGAISTAFILTLIGVAV---SSVKK 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + + + + + F + + + P++ + L + + L ++ + + Sbjct: 298 RGGMGINLMVGVVVGFSFVFFDRVFGTLAQSSGGLSPLMAVLLPNLIFLTLAILLLRKVR 357 >gi|331654590|ref|ZP_08355590.1| putative permease [Escherichia coli M718] gi|331047972|gb|EGI20049.1| putative permease [Escherichia coli M718] Length = 386 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 47/360 (13%), Positives = 124/360 (34%), Gaps = 3/360 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 28 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 87 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I + G S + L IL ++ L + Sbjct: 88 LVELSPFIALLGGIVGLGQLSKNSELTAIRSMGFSIFRIALVALVAGILWTVSLGAIDEW 147 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 148 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 207 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + +L+ + + + + ++ S + + + Sbjct: 208 DLSLESYIYARSATIEDDKTWVLHGVNHKKWLNGKETLETLDNLAWQSAFTSMDLEELSM 267 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + YR ++L Q + + L+++ Sbjct: 268 PGNTFSVRQL-NHYIHYLQETGQPSSEYRLALWEKLGQPILTLAMILLAVPFTFSAPRSP 326 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + + + + + + +++ P+ L L + L + Y + Sbjct: 327 --GMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPIAFVLVALSLVYWYDR 384 >gi|215488305|ref|YP_002330736.1| predicted permease [Escherichia coli O127:H6 str. E2348/69] gi|215266377|emb|CAS10814.1| predicted permease [Escherichia coli O127:H6 str. E2348/69] Length = 359 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 48/354 (13%), Positives = 122/354 (34%), Gaps = 3/354 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N + I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVDVEIFHYRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + IL+ + + + ++ S N + + Sbjct: 181 DLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETQETSDYLAWQSTFTSMNLEELSM 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + YR ++L Q + + L+++ Sbjct: 241 PGNTFSVRQL-NHYIHYLQETGQPSSEYRLALWEKLGQPILTLAMILLAVPFTFSAPRSP 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + + + + + + + +++ P+ L L + L + Sbjct: 300 RMG--SRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSL 351 >gi|261867783|ref|YP_003255705.1| 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413115|gb|ACX82486.1| 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase [Aggregatibacter actinomycetemcomitans D11S-1] Length = 372 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 56/371 (15%), Positives = 136/371 (36%), Gaps = 27/371 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + I +S + ++ I + Q+++ + ++ +++ + G +PT+ Sbjct: 6 ILTRYLTKEIFKSQIAILFILLLIFFCQQLVRVLGSAANGKVPADLVFSLLGLGMPTMAQ 65 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P C + L + +E+ ++ G + L+K VL L++L S + + Sbjct: 66 LMLPLCLFIAILLTLGRLYAESEITVMRACGVGQPILVKVVLLLSLLTSGVAAYNALWLT 125 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+ L F ++ ++ NN + +++ ++ Sbjct: 126 PWAIHKQTEIVEDAKANPNVGALSAGQFVSANNSDFVLFIDDIQNNQINNVYVFQTQPRG 185 Query: 183 --THKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G + Q + L + E + D I F Y + Sbjct: 186 QSKPSVIVAEKGELKALPNGDQVLNLQNSERFEGTAALPDFRITHFDEYQAYLGHKAVND 245 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + +LS LLN ++EFH RLT L I L+++ Sbjct: 246 DSAETEELSLSQLLNT----------KTPAAKTEFHWRLTLILAVPIMALLAVPL---SR 292 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN----PYYIPILYLFLFCISSIF--- 350 + ++ + + +L + F S + ++P++ + F ++ + Sbjct: 293 VNPRQGRFAKVLPALLLYLIYFLLQSSLKSAGGAGKLDAGLFMPLVNIVFFLLAILLNSW 352 Query: 351 --LLMIKKKYT 359 M + +Y+ Sbjct: 353 DSAFMYRIRYS 363 >gi|148977744|ref|ZP_01814300.1| putative permease [Vibrionales bacterium SWAT-3] gi|145962958|gb|EDK28228.1| putative permease [Vibrionales bacterium SWAT-3] Length = 360 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 49/355 (13%), Positives = 115/355 (32%), Gaps = 23/355 (6%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 ++R +S + + + + + S +++L I +P + ++ P Sbjct: 1 MIRETIKSQFAIFFVLFLVFLSQKFISVLADASDGAIPASLILSIVSLNMPAMGLLMLPL 60 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 + + +E+++++ TG LI+ L+LA++ + + + P + Sbjct: 61 SIYIGILLTFGRLYAESEIVVMNATGIGNKFLIQSALYLALITASVAAFNSFWLSPWSQD 120 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT---- 183 ++Q+ + + L + F D + N L+ +F+ R + Sbjct: 121 KVEQMYEEVAAENSVDLLPKGKFEGTPDGSSVVFIDDIDGNKLENVFVAQMRPRDSVLPS 180 Query: 184 -HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + RQ I++ DG H P D + F+ Y Sbjct: 181 VMYSKSGDVKELSDGRQVIVMYDGTRHEGVPTRLDYMVTHFEEYEGLIGQREVEKKGRDW 240 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 L+ + ++E R++ + L++++ A+ ++ Sbjct: 241 EAIPTLDLV----------GNPNNSAKAELQWRISL---VLCIPLLTMLVVPLSAVNPRQ 287 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-----YIPILYLFLFCISSIFLL 352 + I ++ I F S IE+ PI L L + Sbjct: 288 GRFAKIGPAILIYLTYFLAISATKSAIEEGSIPAVVGMWPINALLLIVAIGANFM 342 >gi|117925962|ref|YP_866579.1| permease YjgP/YjgQ family protein [Magnetococcus sp. MC-1] gi|117609718|gb|ABK45173.1| permease YjgP/YjgQ family protein [Magnetococcus sp. MC-1] Length = 392 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 54/354 (15%), Positives = 133/354 (37%), Gaps = 7/354 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+L + + + + + + QIL ++L + + S+++L K+ ++P Sbjct: 1 MKRLSRYLLTECALTSFTALVVLTTLVLLPQILMLVDLWVNKSVSVSVLGKMVLLIMPKF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + L + +++EL++I +G S + + P+ ++++ Sbjct: 61 LVASLPMALLVGILIGLGRLAQDSELIVIKASGISLLRIFYPLSVPIVVVTACSLYLNWF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + TFS + + + + L+G+ I D RD Sbjct: 121 LVPDSHTLFQNIRVALLSQNTFSIKTQTFNNTIPGLTIYVNRQSHGGKLLEGLLIHDERD 180 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 A+SG + A++L +G H+ +P + + F +Y L+ A + Sbjct: 181 PDMPVTVIAKSGMLHRGSTGETALLLKEGSRHQMAPGNA-YRRLNFSTYDLELGIAFETE 239 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + P L E+H+R L ++ G ++I A Sbjct: 240 SSSGDRAIRSYSIADLEQARIAQDPLLASEAEREWHRRFAIPLATLLLGFLAIPLAM--Q 297 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 ++ + +++S+ + + + + + P + + ++ + Sbjct: 298 QNQRSGRGFGFIVAISVLI-LQFILLTLGEAMAKRGLISPAMGAWSPNLALLLF 350 >gi|331643680|ref|ZP_08344811.1| putative permease [Escherichia coli H736] gi|331037151|gb|EGI09375.1| putative permease [Escherichia coli H736] Length = 386 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 48/360 (13%), Positives = 124/360 (34%), Gaps = 3/360 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 28 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 87 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I + G S + L IL ++ L + Sbjct: 88 LVELSPFVALLGGIVGLGQLSKNSELTAIRSMGFSIFRIALVALVAGILWTVSLGAIDEW 147 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 148 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 207 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + IL+ + + + + ++ S + + + Sbjct: 208 DLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLETLDNLAWQSAFTSMDLEELSM 267 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + YR ++L Q + + L+++ Sbjct: 268 PGNTFSVRQL-NHYIHYLQETGQPSSEYRLALWEKLGQPILTLAMILLAVPFTFSAPRSP 326 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + + + + + + +++ P+ L L + L + Y + Sbjct: 327 --GMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPIAFVLVALSLVYWYDR 384 >gi|26249547|ref|NP_755587.1| hypothetical protein c3716 [Escherichia coli CFT073] gi|254162933|ref|YP_003046041.1| hypothetical protein ECB_02855 [Escherichia coli B str. REL606] gi|26109955|gb|AAN82160.1|AE016766_248 Hypothetical protein c3716 [Escherichia coli CFT073] gi|253974834|gb|ACT40505.1| conserved hypothetical protein [Escherichia coli B str. REL606] gi|253978989|gb|ACT44659.1| conserved hypothetical protein [Escherichia coli BL21(DE3)] gi|309703415|emb|CBJ02754.1| putative permease [Escherichia coli ETEC H10407] Length = 386 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 48/360 (13%), Positives = 124/360 (34%), Gaps = 3/360 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 28 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 87 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I + G S + L IL ++ L + Sbjct: 88 LVELSPFIALLGGIVGLGQLSKNSELTAIRSMGFSIFRIALVALVAGILWTVSLGAIDEW 147 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 148 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 207 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + IL+ + + + + ++ S + + + Sbjct: 208 DLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLETLDNLAWQSAFTSMDLEELSM 267 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + YR ++L Q + + L+++ Sbjct: 268 PGNTFSVRQL-NHYIHYLQETGQPSSEYRLALWEKLGQPILTLAMILLAVPFTFSAPRSP 326 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + + + + + + +++ P+ L L + L + Y + Sbjct: 327 --GMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPIAFVLVALSLVYWYDR 384 >gi|269468373|gb|EEZ80038.1| permease [uncultured SUP05 cluster bacterium] Length = 360 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 48/364 (13%), Positives = 133/364 (36%), Gaps = 8/364 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI + + + L + +V I + L+ + + ++ +L L G LIP++ Sbjct: 1 MKILDRYIAKTLLKYSLSVMVVLVGIFAFFKFLEEVGDIGRASYTLFDALAYVGLLIPSI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ + L + N+EL+I+ G S + + K L ++++ + + I Sbjct: 61 VYALSSLIILLGCILGLGYLAGNSELIIMRGAGISVVEITKTTLKVSLVFIVIMIIFGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P K+ A+A S ++ + R ++ + + I + Sbjct: 121 ISPLFSDYAKKYRAQALGESVISSSQQGFWLRDGNNFIQVDKNIDGRIFEKITLINLNTP 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK----DISIMKFKSYTLQTESANSS 236 + + Y+ D + ++L H+ + + D ++ + + Sbjct: 181 STLDSVVYSDKAVF--DGKNMVLQKSNYHQINSDQEFAAIDQKTLQQYLTEVAFDQELIK 238 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 ++ + + + L + + Y E ++R+ + L + ++++ Sbjct: 239 SLKKEPKEFSTWQLFRR-VQFLSNNDLSADIYEVELYQRIMKPLTLIAMIILALPFVFGS 297 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + +S+ F + +I + + L + + + M+++ Sbjct: 298 LRDSSLGRKIFTGVVISLFFELSSRLGGMISLRFDLNHLLSA-SLPTIVVFVLAIFMLRR 356 Query: 357 KYTK 360 T+ Sbjct: 357 VSTR 360 >gi|198283962|ref|YP_002220283.1| permease YjgP/YjgQ family protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667335|ref|YP_002426598.1| YjgP/YjgQ family protein [Acidithiobacillus ferrooxidans ATCC 23270] gi|198248483|gb|ACH84076.1| permease YjgP/YjgQ family protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519548|gb|ACK80134.1| YjgP/YjgQ family protein [Acidithiobacillus ferrooxidans ATCC 23270] Length = 357 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 46/361 (12%), Positives = 117/361 (32%), Gaps = 6/361 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + + R + + ++ + ++ QI+ + + S+ LL + +P V Sbjct: 1 MKRADRLLFRGMLLYSSLVLAMLLTLVYIAQIIAKSSGPGHGVWSMTRLLSYAALQLPDV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 V P + ++ ++ ++E++ + +G S L +P+L + +L + +F Sbjct: 61 AYDVIPLALLLGALVWMSILSGHSEVIALRMSGWSVWRLEQPLLLVGLLGAGLMFALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENL--FFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 + P + + A A + + R + + + LQ + I D Sbjct: 121 VIPVTAPAAEAMWANAGEPGAGFHNMGPRGLWLRYGTQIIQVGTVGDGGKILQNLHIADV 180 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 R + L+D + R +P ++ + + + A S+ Sbjct: 181 RQGMVGINAMTTAAEAVFQGGHWYLHDVRLFRITPDQIQMTAVTETPWPVALHPATLSSF 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 L L + + + F +R++ ++ L+++ Sbjct: 241 AHPTRTMTLPTL-WQSYQALQSGALNMNRFALAFWRRVSYPWVGLVMILLAVPFV--TRN 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 R + L + G + I + P+ L + ++ Sbjct: 298 PRGGGLAARVMAGLVLGLGFHFLTEMSG-YISVSGGIPPLAATLLPIALFAAVAGALHRF 356 Query: 359 T 359 + Sbjct: 357 S 357 >gi|126696921|ref|YP_001091807.1| putative permease [Prochlorococcus marinus str. MIT 9301] gi|126543964|gb|ABO18206.1| possible permease [Prochlorococcus marinus str. MIT 9301] Length = 401 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 54/376 (14%), Positives = 131/376 (34%), Gaps = 25/376 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQ-ILQRINLVSSSTESLNILLKISGYLIPTVL 61 + ++L I + + I+ + + I + L + LK+ + +P+ L Sbjct: 25 LIDRWLLGQIIPPMIFAISAFTVISLSVGVMFDLIRKIVEFGLPLFLALKVLFFSLPSFL 84 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + T ++ N+ELL + + G +I P + L+I ++ F + + Sbjct: 85 VLSFPMAVLLSTLLAYGKLSSNSELLALKSLGIKTSRIISPAIALSIFMTGLTFYFNDNL 144 Query: 122 EPKCRS-----------------TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKY 164 P K ++ S + +I + + Sbjct: 145 VPASNKLAEKTLRAGIGSSFSAEQRKDNIMFSRYGSRISSSNKKPTKTNTFLTHIFYASW 204 Query: 165 NPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK 224 NN ++G+ ++D +I A++G D + I +DG + P + +I + Sbjct: 205 YENNIMEGVTVLDFSREDFQQILKAKNGVFDKKSSSWIFSDGNIVSIDPSGQTTNIQFQE 264 Query: 225 -SYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRP-ELLETYRSEFHKRLTQWLFP 282 +Y + + AN+ L + + + + ++ T Sbjct: 265 YTYPFVEGPMELAKVPKDANEMTLKQAIQAEKIYEKTGNLKEIRRIKVRIQEKFTLPFAC 324 Query: 283 VIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 ++FGLI + K +S+ + +++ S++ PI + Sbjct: 325 LVFGLIGSSLG--SKSNLRSSKSQGFGLSVIL-ILIYYVMSFLFSSFGVKGILPPIFAAW 381 Query: 343 LFCISSI--FLLMIKK 356 L + S+ + ++++ Sbjct: 382 LPVLISLGGGIYLLRR 397 >gi|331648770|ref|ZP_08349858.1| putative permease [Escherichia coli M605] gi|331042517|gb|EGI14659.1| putative permease [Escherichia coli M605] Length = 386 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 50/360 (13%), Positives = 123/360 (34%), Gaps = 3/360 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 28 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 87 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 88 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 147 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 148 GASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 207 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + IL+ + + + ++ S N + + Sbjct: 208 DLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLETSDNLAWQSTFTSMNLEELSM 267 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + YR ++L Q + + L+++ Sbjct: 268 PGNTFSVRQL-NHYIHYLQETGQPSSEYRLALWEKLGQPILTLAMILLAVPFTFSAPRSP 326 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + + + + + + +++ P+ L L + L + Y + Sbjct: 327 --GMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYWYDR 384 >gi|281357796|ref|ZP_06244282.1| permease YjgP/YjgQ family protein [Victivallis vadensis ATCC BAA-548] gi|281315743|gb|EFA99770.1| permease YjgP/YjgQ family protein [Victivallis vadensis ATCC BAA-548] Length = 371 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 45/370 (12%), Positives = 110/370 (29%), Gaps = 17/370 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+ R +F M+ + F +++ ++ V S S + + Y++P + Sbjct: 1 MKILNWYVTRGFLLAFFMAIGILTFGMTGANLVKVLDYV-SQGISFFTFFEFTLYILPII 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P+ + V ++ ++E+ + G S + ++ P+L + L +F + Sbjct: 60 LTFTVPWAVMVAVMLVFGRLSADSEITAMRACGVSILQIVSPILIITFFLMLFCLYLQVE 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + L A + + E ++ + K + S Sbjct: 120 VGPPLLGKSRTLMQTAAINQPLAIFEPGKQIEFENTIIYIDDKEGEDGIKGVQIYTLSDP 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILN--------------DGEVHRKSPISKDISIMKFKSY 226 + A+ G + +D++ +L + + + Sbjct: 180 QTVAQDISAERGKLLVDKEKQLLIVRLFDCLVVDKKGAAEQQQDGDAGMPTRFFTQQLEF 239 Query: 227 TLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFG 286 + + + L E ++R+ L P+ F Sbjct: 240 SFNYGKQANERRISTKAKYMKLTDLMGKIRLTKQLERDTTELEVELNQRIAFALSPIAFL 299 Query: 287 LISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCI 346 L+ + A R+ + + + Y +L+L Sbjct: 300 LLGLPLAI--RTSRRETSVGLFLSVILAGVFFLSIILCESLSSFPHLYPQYLLWLPNIIF 357 Query: 347 SSIFLLMIKK 356 + +M + Sbjct: 358 QILGAVMTYR 367 >gi|254486546|ref|ZP_05099751.1| permease, YjgP/YjgQ family [Roseobacter sp. GAI101] gi|214043415|gb|EEB84053.1| permease, YjgP/YjgQ family [Roseobacter sp. GAI101] Length = 365 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 46/362 (12%), Positives = 117/362 (32%), Gaps = 22/362 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 LY R F++ + + ++ ++++ + L ++ P L Sbjct: 2 ILHLYFARRFVTGFVLISAVLFALLILVDMVEQARKFAEHDIGWQRLFGMTLLNTPETLN 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + T + S+ R++EL++ +G S ++ ++ +++A ++ I N I Sbjct: 62 LILPLIMILATVVLFLSLARSSELVVTRASGRSALSALQAPVWVAFIIGIMAVGMLNPIV 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-------LYIKISKYNPNNTLQGIFI 175 QLS + + + L + S + + F+ Sbjct: 122 AATAKRYIQLSESIRAGGVSTLSISDEGLWLRQGGDQGQTVIRAWRSNADASVLYDVTFL 181 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQ------AIILNDGEVHRKSPISKDISIMKFKSYTLQ 229 + + A S +++ D + L G + + + + Sbjct: 182 TYAAQGGPIRRIEASSAALEDDGWVLTGAKSWPLELGVNAEGNAEVFETLTLPSTLTLDR 241 Query: 230 TESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 + + V+ D + ++ L + F V L++ Sbjct: 242 IRESITDPGVVSIYDLP------GFIHQLELAGFSPRRHKVWLQTELARPFFLVAMVLVA 295 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 R + S+ + FG+++ S+ + +N +L + ++SI Sbjct: 296 SAF--TMRHTRFGGTGVAVLASVLLGFGLYFIRSFAQ-ILGENGQIPVVLAAWAPPVASI 352 Query: 350 FL 351 L Sbjct: 353 LL 354 >gi|88808511|ref|ZP_01124021.1| possible permease [Synechococcus sp. WH 7805] gi|88787499|gb|EAR18656.1| possible permease [Synechococcus sp. WH 7805] Length = 388 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 51/375 (13%), Positives = 132/375 (35%), Gaps = 21/375 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQ-ILQRINLVSSSTESLNILLKISGYLIPTVL 61 + ++L + L + ++ + + + + + S + I +++ +P+ L Sbjct: 18 LLDRWLLGELLGPLLFAVAAFTVVSLSVGVMFELVRQIVESGLPVGIAVQVLLQRLPSFL 77 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P M + + ++ N+EL + + G + +I P L LA+++S FI + + Sbjct: 78 VISFPMATLMASLLAYSRLSANSELTALRSVGVTATRMIVPALILALVMSGLTFIFNDAL 137 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLY------------IKISKYNPNNT 169 P+ + + A+A + N+ + L + ++ + Sbjct: 138 VPRANRSAETTLARALGKAIATEKGTNIVYSRFGRLQETDGTSNKGLAQLFYARKFRDGV 197 Query: 170 LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ 229 + + ++D ++ A + + DG++ +P S F Y Sbjct: 198 MNEVTVLDFTRAGFTQMLVADRAVWNESQAKWQFFDGQILTLTPSGSTTS-ADFDQYLYP 256 Query: 230 TESANSSTIVLKANDQNLS---FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFG 286 +A L + N++ L + + ++ T + ++FG Sbjct: 257 LSAAPIRIAKLPKDANNMTVVEALQAKDLLQQAGDIKEARRLEVRIQEKFTLPMACLVFG 316 Query: 287 LISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF-LFC 345 LI K + + IS+ + V++ S+ + P+L + Sbjct: 317 LIGASLGAKP--NNRTSRSQGFGISVVL-ILVYYVLSFSFSSLGVKGTLPPLLAAWSPVL 373 Query: 346 ISSIFLLMIKKKYTK 360 IS + ++ ++ Sbjct: 374 ISLAGGGFLLRQASR 388 >gi|262068070|ref|ZP_06027682.1| permease, YjgP/YjgQ family [Fusobacterium periodonticum ATCC 33693] gi|291378156|gb|EFE85674.1| permease, YjgP/YjgQ family [Fusobacterium periodonticum ATCC 33693] Length = 359 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 60/355 (16%), Positives = 117/355 (32%), Gaps = 1/355 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YIL + +++ FI + ++ + + S+ +L++ + IP + Sbjct: 1 MKIINKYILDELKGPIILAVFVFTFIFLLDIVVTMMEHIIVKGISVFDVLRLLSFYIPPI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + T +RN+E + + +TG S ++KP+L +AI +IF+ + Sbjct: 61 LTQTIPIGMFLGIMICFTKFSRNSESVAMVSTGMSIRAILKPILAIAIGAAIFILFLQES 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P+ +K + K L+E F D I + K + + I + + Sbjct: 121 IIPRSFVKLKYVGTKIAYENPVFQLKEKTFIDNLDQYSIYVDKVESDGKAKNIIAFEKPE 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 +T AIIL + K F + + L Sbjct: 181 DKTKFPMVLTGEEAFWKDNAIILKQSQFISFDETGKKNLTGTFDEKRVVLTPY-FENLNL 239 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K D + + N E + Y+ E ++L V +I + + Sbjct: 240 KIKDVEALSITDLVKNIRKVETEEVLKYKIEIFRKLALIFSTVPLAVIGFCLSLGHHRIS 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 ++ I + + + +P+ L L K Sbjct: 300 KKYSFVLAMIIIFAYIIFLNIGIVMASAGKIHPFIATWTPNVLLYFLGYKLYRAK 354 >gi|331679053|ref|ZP_08379725.1| putative permease [Escherichia coli H591] gi|331073118|gb|EGI44441.1| putative permease [Escherichia coli H591] Length = 386 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 50/360 (13%), Positives = 126/360 (35%), Gaps = 3/360 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 28 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 87 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 88 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 147 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 148 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 207 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + IL+ + + + I+ ++ S N + + Sbjct: 208 DLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLEILDNLAWQSTFTSMNLEELSM 267 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N N + YR ++L + + L+++ Sbjct: 268 PGNSFSVRQL-NHYINYLQETGQPSSEYRLALWEKLGHPILTLAMILLAVPFTFSAPRSP 326 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + + + + + + +++ P+ L L + L++ + + Sbjct: 327 --GMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVAALGLPMAFVLAALILVYLFDR 384 >gi|294341187|emb|CAZ89588.1| putative permease YjgP/YjgQ [Thiomonas sp. 3As] Length = 365 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 49/359 (13%), Positives = 113/359 (31%), Gaps = 8/359 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M++ ++L + + + L + + + I +L ++ + SL+ L +P+ Sbjct: 1 MRTVRRFLLLHVLSAVGLVTLAFLALLFFIDMLNDLSNLGKPGFSLSGTLLHVALSMPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 V P + L S+ ++E I+ +G S + +L LA L + LF+ Sbjct: 61 AYEVLPIATLVGGVFALASLAASSEFTILRISGLSPRAALGLLLQLAAALVVTLFLLGEW 120 Query: 121 IEP---KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD 177 + P + + ++ S + + + I N L I I Sbjct: 121 LAPAAGQLSARLQAGGGSGIGTQLASGVWLRNDSDRSGNQTVNIKAINTRGDLTDIHIYV 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK---DISIMKFKSYTLQTESAN 234 +L++ + ++ + + + Sbjct: 181 LNAQAQIAAELHAPSGQYEGGGTWMLHNVTRTELPQQTGAALKVTQLPSYRWRTSLSPSV 240 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 ++L + + L + + E Y + K+L V+ L+++ A Sbjct: 241 LGVLLLSPDKMSAIDL-WRYIQHLRANHQAAERYEIQLWKKLFYPFSAVVMLLLALPFAY 299 Query: 295 KRALVRQRKKIHPIFISLSISFGVFW-GFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 + I L I+F + FS + P + + LF + + Sbjct: 300 LHTRSKGVSGKVLAGIVLGIAFILLNTLFSSLGILGTWPPAITAAMPMLLFGGLGLIVF 358 >gi|293390144|ref|ZP_06634478.1| 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase [Aggregatibacter actinomycetemcomitans D7S-1] gi|290950678|gb|EFE00797.1| 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase [Aggregatibacter actinomycetemcomitans D7S-1] Length = 372 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 57/371 (15%), Positives = 137/371 (36%), Gaps = 27/371 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + I +S + ++ I + Q+++ + ++ +++ + G +PT+ Sbjct: 6 ILTRYLTKEIFKSQIAILFILLLIFFCQQLVRVLGSAANGKVPADLVFSLLGLGMPTMAQ 65 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P C + L + +E+ ++ G + L+K VL L++L S + + Sbjct: 66 LMLPLCLFIAILLTLGRLYAESEITVMRACGVGQPILVKVVLLLSLLTSGVAAYNALWLT 125 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+ L F ++ ++ NN + +++ ++ Sbjct: 126 PWAIHKQTEIVEDAKANPNVGALSAGQFVSANNSDFVLFIDDIQNNQINNVYVFQTQPRG 185 Query: 183 --THKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G + Q + L + E + D I F Y + Sbjct: 186 QSKPSVIVAEKGELKALPNGDQVLNLQNSERFEGTAALPDFRITHFDEYQAYLGHKAVND 245 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +A + +LS LLN ++EFH RLT L I L+++ Sbjct: 246 DSAEAEELSLSQLLNT----------KTPAAKTEFHWRLTLILAVPIMALLAVPL---SR 292 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN----PYYIPILYLFLFCISSIF--- 350 + ++ + + +L + F S + ++P++ + F ++ + Sbjct: 293 VNPRQGRFAKVLPALLLYLIYFLLQSSLKSAGGAGKLDAGLFMPLVNIVFFLLAILLNSW 352 Query: 351 --LLMIKKKYT 359 M + +Y+ Sbjct: 353 DSAFMYRIRYS 363 >gi|330950945|gb|EGH51205.1| permease YjgP/YjgQ [Pseudomonas syringae Cit 7] Length = 353 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 49/355 (13%), Positives = 110/355 (30%), Gaps = 4/355 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + + L I+ + + + + + S T +L L P Sbjct: 1 MVKLDRYIGKSVLLAILAVLGIILGLVSLFAFIDEMGDI-SDTYTLADALSYVMLTAPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ ++EL I+ G S ++ V+ +LL I + Sbjct: 60 VYDTLPMAALIGCLIGLGTLASSSELTIMRAAGVSIGRIVWAVMKPMLLLMIAGVLVGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + AQ + L+ R D+ + L Sbjct: 120 VAPYAENQAQAARSLAQGSGDAQSARHGLWHRQGDEFIHINTVQPNGLMLGVTRYRFDDQ 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 +A+ + D L D + S + + + + ST+++ Sbjct: 180 RHMLTSSFAKEANFKTD--YWELKDVTTTHFNDGSTKVINTPVERWDVALSPQLLSTLIM 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 ++S L + + Y F ++ Q V L++I Sbjct: 238 PPESLSISGL-WSYAHYLADQGLSNGRYWLAFWTKVLQPAVTVALVLMAISFIFGPLRSV 296 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + + +F + + P + +L C + LL+ + Sbjct: 297 TLGQRVFTGVVVGFTFRIIQDLLGPSSLLFGFPPLLAVLLPAAACALAGVLLLRR 351 >gi|227114629|ref|ZP_03828285.1| putative permease [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 371 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 53/354 (14%), Positives = 132/354 (37%), Gaps = 15/354 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N+++ + G +P ++ Sbjct: 2 IIIRYLVRETFKSQLAILFILLLIFFCQKLVRILGAAVDGEIPTNLVISLLGLGVPEMVQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ G + L+K L LA+ +I I+ + Sbjct: 62 LILPLSLFLGVLMTFGRLYAESEITVMHACGLGKRVLLKAALVLAVFTAIVATINVMWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +++ A+A+ + L E F + + + +F+ R + Sbjct: 122 PWSSRHQEEVLAEAKANPGMAALVEGQFQSAQGGNAVLFVGNVKGSEFEHVFLAQLRPSG 181 Query: 183 T--HKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A G I + Q + L++G + + + +D I F +Y + + Sbjct: 182 NARPSVVVADRGHIKQNEDGAQVVTLDNGSRYEGTALLRDFRITDFTNYQAVIGHQSVTL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +++ L + + ++ R+EFH RLT + +I L+ + + Sbjct: 242 NNSDVQQMDMNTLWHSDAHDA----------RAEFHWRLTLIISVLIMALMVVPLSVVNP 291 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + + P + I F + K + +P L ++ ++ L Sbjct: 292 RQGRVLSMLPAMLLYLIFFLLQSSLRSNASKGKIDPMVWVWLTNLMYFGIAVML 345 >gi|307310386|ref|ZP_07590034.1| permease YjgP/YjgQ family protein [Escherichia coli W] gi|306909281|gb|EFN39776.1| permease YjgP/YjgQ family protein [Escherichia coli W] gi|315062298|gb|ADT76625.1| permease YjgP/YjgQ family protein [Escherichia coli W] gi|323377117|gb|ADX49385.1| permease YjgP/YjgQ family protein [Escherichia coli KO11] Length = 359 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 50/360 (13%), Positives = 125/360 (34%), Gaps = 3/360 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VSS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSSGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + IL+ + + + ++ S + + + Sbjct: 181 DLSLESYIYARSATIKDDKTWILHGVNHKKWLNGKETLETSDNLAWQSAFTSMDLDELSM 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + YR ++L Q + + L+++ Sbjct: 241 PGNTFSVRQL-NHYIHYLQETGQPSSEYRLALWEKLGQPILTLAMILLAVPFTFSAPRSP 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + + + + + + +++ P+ L L + L + Y + Sbjct: 300 --GMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYWYDR 357 >gi|83942393|ref|ZP_00954854.1| permease, YjgP/YjgQ family protein [Sulfitobacter sp. EE-36] gi|83846486|gb|EAP84362.1| permease, YjgP/YjgQ family protein [Sulfitobacter sp. EE-36] Length = 365 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 44/357 (12%), Positives = 111/357 (31%), Gaps = 16/357 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 LY R F++ + + ++ ++ + SS L ++ P + Sbjct: 2 ILHLYFARRFIMGFILISAVLFSLLVLVDMVDQARRFSSYDIGWLRLFGMTLLNTPETMN 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + T + S+ R++EL++ G S ++ ++ +++A ++ + N I Sbjct: 62 LILPLIMILATVVLFLSLARSSELVVTRAAGRSALSALQAPIWVAFIIGVMAVGMLNPIV 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-------LYIKISKYNPNNTLQGIFI 175 QLS + T + L + S + + F+ Sbjct: 122 AATAKRYIQLSDSIRAGGTSVLSVSDEGLWLRQGSDEGQTVIRAWRSNKDASVLYDVTFL 181 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI---SKDISIMKFKSYTLQTES 232 + + + A S ++ + L D + + Sbjct: 182 SYAPEGGPARRIEADSAAL--ENGIWTLTDAKSWPLEVGVNAEGAAETFDTLTLPSTLTL 239 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + ++ L + ++ L + F V L++ Sbjct: 240 DRIRDSITDPGAVSIYDLPD-YIKQLELAGFSPRRHKVWLQTELARPFFLVAMVLVASAF 298 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 R + S+ + FG+++ S+ + +N +L + ++SI Sbjct: 299 --TMRHTRFGGTGVAVLASVLMGFGLYFIRSFAQ-ILGENGQIPVLLAAWAPPVASI 352 >gi|256820810|ref|YP_003142089.1| permease YjgP/YjgQ family protein [Capnocytophaga ochracea DSM 7271] gi|256582393|gb|ACU93528.1| permease YjgP/YjgQ family protein [Capnocytophaga ochracea DSM 7271] Length = 358 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 45/360 (12%), Positives = 119/360 (33%), Gaps = 3/360 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL+ +F M + + I ++ + ++++ + +N +L I Sbjct: 1 MKILDWYILKRYLLTFFMMIILFIPIGIIVDLSEKVDKMIQKGAPMNEILWYYLSFIVYF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + + + NTE++ I ++G S + ++P + A ++S+ +F Sbjct: 61 ANILFPILLFLSIIWFTSKLANNTEIIAIQSSGVSYMRFLRPYIVGASIISVIVFFMGMF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + K + + + D+D S + + Sbjct: 121 IVPAASTVYNDFWNKYIRSSKVESVSDLYNQFSDNDYLYVSSFNYQDKRGYNFSVEHFNG 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + A++ + L + + I + + + Sbjct: 181 IKMTEKINAETIQWIDSTKTYRLTNYSKRKIGEGDDVIVKRDQLDTIFNFKPDDLMPMEY 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 A ++NL L L Y ++R I LI + ++ + Sbjct: 241 TAENKNLFELNKFIEREKMKGSPNLNMYLLVKYRRWGAISTAFILTLIGVAV---SSVKK 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + + + + + F + + + P++ + L + + L ++ + + Sbjct: 298 RGGMGINLMVGVVVGFSFVFFDRVFGTLAQTSGGLSPLMAVLLPNLIFLTLAILLLRKVR 357 >gi|182413236|ref|YP_001818302.1| permease YjgP/YjgQ family protein [Opitutus terrae PB90-1] gi|177840450|gb|ACB74702.1| permease YjgP/YjgQ family protein [Opitutus terrae PB90-1] Length = 384 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 59/384 (15%), Positives = 126/384 (32%), Gaps = 32/384 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQ-RINLVSSSTESLNILLKISGYLIPT 59 M + Y+ + + + + FI V +L+ + V + SL + ++ L+P Sbjct: 1 MNLLDRYLFKSVLFTCAAAVALFTFIVLVPNVLRDMLAYVLTGQLSLLVFARLVFTLLPL 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 L P L ++ ++E+ + G S +++P+L LA + S Sbjct: 61 ALSYALPMGMLTGVLLTLGRLSADSEVTAMRAVGLSIPRIVRPILLLAAMGSALGIYLNF 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 P+ R ++ A A A + + F R + + + Sbjct: 121 ESMPRARVEYERGFAAAIQANPLNLIVPKTFIRSFPGYVVYVGEKQGGIMRDFWLWELDA 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT------------ 227 + + + A SG D D L K + +F+ Sbjct: 181 EGRVERFVRAASGRFDYDEPNNSLMLTLTQAKVESRAKENPERFEKPQLVASLGQWGPIQ 240 Query: 228 --LQTESANSSTIVLKANDQNLSFL-----------LNPNPNNPNYRPELLETYRSEFHK 274 L ++ I +K L L + FH Sbjct: 241 LSLNRFFGRNAGIRMKQEWMTYGQLQAEGERLAAQPLPADAAEAKQARRTRMKLAIVFHD 300 Query: 275 RLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY 334 ++ L LI + K + +R+ +++ I+ V++ + +I ++++P Sbjct: 301 KINTALAVFSLALIGVPLGIKVS---RRETSANFAVAVGIT-LVYYLMTVVIKVLDRHPE 356 Query: 335 YIP--ILYLFLFCISSIFLLMIKK 356 Y P +L+L F + L ++ + Sbjct: 357 YRPDLLLWLPNFILIGFGLWLMAR 380 >gi|262045293|ref|ZP_06018318.1| YjgP/YjgQ family membrane protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259037349|gb|EEW38595.1| YjgP/YjgQ family membrane protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 360 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 47/355 (13%), Positives = 115/355 (32%), Gaps = 3/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ + ++ + + +P + + Sbjct: 7 LDRYIGKTIFNTIMMTLFMLVSLSGIIKFVDQLKKSGQGSYDALGSGLYTILSVPKDIQI 66 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ G +R+ + V+ AI L + + P Sbjct: 67 FFPMAALLGALLGLGMLAQRSELVVMQAFGFTRLQVALAVMKTAIPLVLLTMAIGEWVAP 126 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+ + ++ L+ + + + + + + Sbjct: 127 QGEQMARNYRAQQMYGGSLLSTQQGLWAKDGHNFVYIERVKGNDELGGVSIYAFNPERRL 186 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + YA S D + + L+ + P S M ++ + L Sbjct: 187 QSVRYAASAKFDSENKVWRLSQVDESDLTDPKQVTGSQMVSGTWKTNLTPDKLGVVALDP 246 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S L N + Y+ ++ Q L + L+++ Sbjct: 247 DALSISGLHN-YVKYLKSSGQDPGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPM 305 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P I L L I L ++ +K Sbjct: 306 GVRVVTGISFGFIFYVLDQIFGPLTLVYGIPPIIGAL-LPSASFFLISLWLMMRK 359 >gi|90411866|ref|ZP_01219874.1| putative permease [Photobacterium profundum 3TCK] gi|90327124|gb|EAS43496.1| putative permease [Photobacterium profundum 3TCK] Length = 366 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 52/363 (14%), Positives = 126/363 (34%), Gaps = 21/363 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R +S L + + + ++ + + + +++L + G +P++ Sbjct: 2 IIVRYLTRETLKSQLAVLFVLFLVFISQKFIRILADATDGSIPGDLILTLMGLYMPSMAL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L LA++ + + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIQAALLLAMITGSVAAFNSLWLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD----LYIKISKYNPNNTLQGIFIVDS 178 P Q+ + + + L + F D I+ + + + Sbjct: 122 PWSSEQETQVMERVESDVGLDLLVKGQFQPAPDGKGVVFVNDITDKGSKLEKVFVAQIVA 181 Query: 179 RDTQTHKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 RDT + A+ G +D RQ + L DG + P D SI +F+ Y Sbjct: 182 RDTMRPSVMVAERGYVSELDDGRQILDLKDGTRYEGVPTRLDYSITEFEDYQALIGQRAI 241 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + L+ + R+EF R++ +L L+++V Sbjct: 242 REKNRDWDALPTPTLMQHSELAA----------RAEFQWRVSMFL---CIPLLTMVVVPL 288 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 ++ ++ + +F ++ I F S + ++ + L+ + + + Sbjct: 289 SSVNPRQGRFAKLFPAVLIYLVYFLAISAAKSAV-EDGSLPSYIGLWSINVVMFVVAIAL 347 Query: 356 KKY 358 + Sbjct: 348 NSW 350 >gi|89075941|ref|ZP_01162316.1| putative permease [Photobacterium sp. SKA34] gi|89048382|gb|EAR53960.1| putative permease [Photobacterium sp. SKA34] Length = 366 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 49/363 (13%), Positives = 121/363 (33%), Gaps = 21/363 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R +S L + + + + + + + +++L G IP++ Sbjct: 2 IIVRYLTRETLKSQLAVLFVLFLVFISQKFISILADATDGSIPSDLILTFMGLSIPSMAL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG L++ L LAI+ ++ + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGMGNKLLLQSALALAIITGSIAAVNAFWVA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSY----LEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 P + I+QL + + T + + I+ + + + Sbjct: 122 PWSQEHIEQLKEETKAGPTLNMLVKGTFQQAPNGSGVIFIDNITDKGSRLHKVFVAQLKA 181 Query: 179 RDTQTHKIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 DT + A +G + RQ + LNDG + P + SI F Y Sbjct: 182 TDTLQPSVMVADNGTVKELSDGRQMLELNDGARYEGIPTQLNYSITHFNDYQALIGQREV 241 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 Q L+ + ++E R + L+ ++ Sbjct: 242 KAGDRDWEAQPTMTLI----------KDKSLAAKAELQWRFSL---VFCIPLLVMIVVPL 288 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 A+ ++ + + ++ I F S I ++ ++ ++ I+++ + + Sbjct: 289 SAVNPRQGRFAKLAPAVLIYLAYFLAISSAKSAI-EDGIIPSVIGMWPINITTLLVALAL 347 Query: 356 KKY 358 + Sbjct: 348 NSW 350 >gi|288940379|ref|YP_003442619.1| permease YjgP/YjgQ family protein [Allochromatium vinosum DSM 180] gi|288895751|gb|ADC61587.1| permease YjgP/YjgQ family protein [Allochromatium vinosum DSM 180] Length = 354 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 42/355 (11%), Positives = 113/355 (31%), Gaps = 3/355 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + Y+ + L++ ++ + V + ++ + + L + + +P Sbjct: 1 MRILDRYLAWAVMSGTLLTLAGLLPLMGVFILSDELDAIGTERYGLAEAMLFTLLSLPRY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L ++ +EL+ + G S L++ L ++L+ + + Sbjct: 61 LYQLFPIATLIGALIGLGTLASRSELVAMRAAGISVGRLVRAALLGGLVLATIAVVLGEL 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +L A F+ +DD Y+ I + +L+ I I Sbjct: 121 VAPIAEQRAVELRRLALSGEAAQL-TPYGFWAIDDGAYVNIREIRSGTSLRDIDIYRVDA 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 G+ D +L + R + ++ + + +V Sbjct: 180 AAGTLEASHAEGARYEDG-RWVLEGIALSRVDGEGVQVERVEHAEWDSMLDPGLLKVVVA 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + L + + Y F ++ + + LI+I + Sbjct: 239 DPRALPVWGLY-KYIRFMSVNKQDASAYEIAFWSKVLHPVLTLSMILIAIPMLLGSSRST 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + I + + + + + + ++ + + I + LL+ + Sbjct: 298 GMGRRMLAGILVGLVYYLVSRTFAYLALLFGMNAFLAAIAPPVLFIGAAMLLLRR 352 >gi|218555553|ref|YP_002388466.1| hypothetical protein ECIAI1_3128 [Escherichia coli IAI1] gi|218362321|emb|CAQ99943.1| conserved hypothetical protein; putative membrane protein [Escherichia coli IAI1] Length = 386 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 49/360 (13%), Positives = 124/360 (34%), Gaps = 3/360 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 28 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 87 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 88 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 147 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 148 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 207 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + IL+ + + + ++ S + + + Sbjct: 208 DLSLESYIYARSATIKDDKTWILHGVNHKKWLNGKETLETSDNLAWQSAFTSMDLDELSM 267 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + YR ++L Q + + L+++ Sbjct: 268 PGNTFSVRQL-NHYIHYLQETGQPSSEYRLALWEKLGQPILTLAMILLAVPFTFSAPRSP 326 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + + + + + + +++ P+ L L + L + Y + Sbjct: 327 --GMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYWYDR 384 >gi|33861942|ref|NP_893503.1| putative permease [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33640310|emb|CAE19845.1| possible permease [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 400 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 54/376 (14%), Positives = 127/376 (33%), Gaps = 25/376 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQ-ILQRINLVSSSTESLNILLKISGYLIPTVL 61 + +++ I L + I+ + + I + L + +K+ + +P+ L Sbjct: 25 LIDRWLIAQILPPMLFAISAFTVISLSVGVMFDLIRKIVEFGLPLFLAIKVLFFSLPSFL 84 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + T ++ N+ELL + + G +I P + ++IL++ F + + Sbjct: 85 VLSFPMAVLLSTLLAYGKLSANSELLALKSLGIKTSRIIAPAIAVSILMTGLTFYFNDNL 144 Query: 122 EPKCRS-----------------TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKY 164 P K ++ +I + + Sbjct: 145 VPSSNKLAESTLRAGIGSSFSSEEGKDNIMFSRYGSRIESATNKPTKTNTFLTHIFYASW 204 Query: 165 NPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK 224 NN +QG+ ++D +I A+S D + + I +DG + + +I K Sbjct: 205 FENNIMQGVTVLDFSRQDIQQILKAKSAVFDKENSSWIFSDGSIVSVDQGGQTTNIQFEK 264 Query: 225 -SYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRP-ELLETYRSEFHKRLTQWLFP 282 Y + + + A + +L L + + + ++ T Sbjct: 265 YRYPFVEGPLDLARVPKDATEMSLKQALEAERIYKETGNLKEIRRIQVRIQEKFTLPFAC 324 Query: 283 VIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 ++FGLI + K +S+ + V++ S++ PI+ + Sbjct: 325 LVFGLIGSSLG--SKSNLRSSKSQGFGLSVIL-ILVYYVMSFVFSSFGVKGLLSPIIATW 381 Query: 343 LFCIS--SIFLLMIKK 356 L + + ++K Sbjct: 382 LPVLISMGGGIYFLRK 397 >gi|77463458|ref|YP_352962.1| putative permease [Rhodobacter sphaeroides 2.4.1] gi|221639316|ref|YP_002525578.1| permease Yjgp/YjgQ family protein [Rhodobacter sphaeroides KD131] gi|332558335|ref|ZP_08412657.1| Permease YjgP/YjgQ family protein precursor [Rhodobacter sphaeroides WS8N] gi|77387876|gb|ABA79061.1| putative permease [Rhodobacter sphaeroides 2.4.1] gi|221160097|gb|ACM01077.1| Permease YjgP/YjgQ family protein precursor [Rhodobacter sphaeroides KD131] gi|332276047|gb|EGJ21362.1| Permease YjgP/YjgQ family protein precursor [Rhodobacter sphaeroides WS8N] Length = 364 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 42/362 (11%), Positives = 96/362 (26%), Gaps = 12/362 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 YI R R + L + +I +L ++ S +L +S +P L Sbjct: 2 ILSRYIARRFLRMVFIVFLAFFGLMMLIDVLDQMRRFSDEGITLVQAGLLSLLRVPATLY 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + + + R++EL+++ G S + + + +A+ L N I Sbjct: 62 TILPLIVILAAVALFLGLARSSELVVVRAAGRSGLRFLVAPMVVALALGTVAVTVLNPIV 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFR-----LDDDLYIKISKYNPNNTLQGIFIVD 177 + + + I + N + T Sbjct: 122 AGTSRQYDAAAGRLARGEASILSISKEGLWLRQGGSGEQTVIHALRSNTDGTRLYAVTFL 181 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISI--MKFKSYTLQTESANS 235 + D + + L+R L+ + + + + T + Sbjct: 182 TFDAEGRPTGRIAAEQAALERGYWQLSGAKSWDLTEANPEARAGLPGNLRVTSELTREGI 241 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + + L +R L++ A Sbjct: 242 QDSFGDPSAIPIWEL-PAYVAGLERAGFSARKHRVWMQMEFALPATLAAMVLVA--AGFT 298 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLM 353 R + ++L F +F+ ++ Q P + L + L+ Sbjct: 299 MRHSRFGGTGRMVLLALLGGFSLFFLRNFAQVLGENGQIPILLAAWSPPLIGVMGSLGLL 358 Query: 354 IK 355 + Sbjct: 359 LH 360 >gi|39936125|ref|NP_948401.1| permease YjgP/YjgQ [Rhodopseudomonas palustris CGA009] gi|39649979|emb|CAE28503.1| predicted permease [Rhodopseudomonas palustris CGA009] Length = 361 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 46/356 (12%), Positives = 104/356 (29%), Gaps = 10/356 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y R + L + + + + + S + + S +P +L Sbjct: 4 NTLGRYFARRFVIASLGVFFGLFVLLVFVDYVDLLRRAGGLAVSAFYVAQASFCRVPQLL 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PFC + +++R+ EL++ G S I P L+ AI + IF N + Sbjct: 64 ERLLPFCILIGGMTCYLALSRSLELVVARAAGLSAWEFISPALWSAIAIGIFATTVFNPL 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFR----LDDDLYIKISKYNPNNTLQGIFIVD 177 + KQ+ A+ T + N F+ D I ++ + V Sbjct: 124 SAHMQERAKQMEAEMFGENTGGLQDANGFWMNQVSPDGQAIINAARSQQQGAVLTGITVF 183 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + ++ L+ +L + + D + A Sbjct: 184 RFEPDFQFKDRIEAREAVLEPGHWLLKNVRRYTMDGAPVDQDTL---ELPTSLTLAQVRN 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L ++ N YR ++HK L + +++ + Sbjct: 241 SFATPESVSFWQLPTYIKSSENSGFATAG-YRLQYHKLLAKPFLLAAMVMLAASVSL--R 297 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 R + ++ F ++ + + C+ + + Sbjct: 298 FFRFGGVQKMVLSGVAAGFLLYILSKVTEDLSKAELMHPLAAAWLPVCVGGLAGFL 353 >gi|50083532|ref|YP_045042.1| hypothetical protein ACIAD0254 [Acinetobacter sp. ADP1] gi|49529508|emb|CAG67220.1| conserved hypothetical protein; putative permease [Acinetobacter sp. ADP1] Length = 366 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 58/354 (16%), Positives = 118/354 (33%), Gaps = 15/354 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + + L+ + I ++++ + + +L I GY +P L Sbjct: 2 IIRRYLVKQVVSTSLVVIALLTLIMMGGRLIKYFGVAAQGRLDAGVLFSIIGYRMPEFLT 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + V + + E+ +++ +G SRI L + ++ LA++ + I + Sbjct: 62 LILPLGFFIGLMLVFGRLYVDHEMAVLNGSGISRIRLGQLLIPLALVFLVIQGILMLWMT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P QLS+ + F + F L+ IF + Sbjct: 122 PWGLRQFDQLSSSQAVRTGFDLVRPKEFISSGPYTIYAGDLSEDRKNLKDIFFYQRAQKE 181 Query: 183 THKIYYAQSGSI------DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + L G + P S +F+ Y L+ E+ S+ Sbjct: 182 GKPDVMILAKEATRVVMENETANVVDLIQGRRYEIYPGKAKYSQAEFQRYRLRLENDKSA 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA-DK 295 T + S L N+P SE R+ VI ++++ Sbjct: 242 TFETDKVEALPSSKLWNKWNDPV--------IASEMGWRVFGPFTIVIALMMAVALCEVS 293 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 R + I IFI S+ + + I Y L ++ + Sbjct: 294 PRQGRYYRLIPAIFIFASLIVLLIAIRTRISRDELGVWAYPAALAVYGIAAALF 347 >gi|332280200|ref|ZP_08392613.1| YjgP/YjgQ permease [Shigella sp. D9] gi|332102552|gb|EGJ05898.1| YjgP/YjgQ permease [Shigella sp. D9] Length = 386 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 49/360 (13%), Positives = 124/360 (34%), Gaps = 3/360 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 28 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 87 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 88 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 147 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 148 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 207 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + IL+ + + + ++ S + + + Sbjct: 208 DLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLETSDNLAWQSAFTSMDLDELSM 267 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + YR ++L Q + + L+++ Sbjct: 268 PGNTFSVRQL-NHYIHYLQETGQPSSEYRLALWEKLGQPILTLAMILLAVPFTFSAPRSP 326 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + + + + + + +++ P+ L L + L + Y + Sbjct: 327 --GMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPIAFVLVALSLVYWYDR 384 >gi|124023382|ref|YP_001017689.1| permease [Prochlorococcus marinus str. MIT 9303] gi|123963668|gb|ABM78424.1| possible permease [Prochlorococcus marinus str. MIT 9303] Length = 403 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 46/376 (12%), Positives = 131/376 (34%), Gaps = 22/376 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQ-ILQRINLVSSSTESLNILLKISGYLIPTVL 61 + ++L + L + ++ + + + + L+ L++ +P L Sbjct: 32 LLDRWLLGELIPVLLFAIAAFTVVSVSVGVMFDLVRKIVEFGLPLHFALQVFSLKLPFFL 91 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + T + ++ N+E + + G S ++ P L LA+L++ FI ++I Sbjct: 92 VISFPMATLLATLLAYSRLSSNSEFTALRSLGVSTRRIVAPALALALLMTGLTFIFNDVI 151 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI-------------KISKYNPNN 168 P+ S+ + +A + +++ + + ++ Sbjct: 152 VPRTNSSAEVTIKRALGKAIATEKGKHVVYSRFGTITGTKAEDRNQGLSQLFYAREFLKG 211 Query: 169 TLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 ++ + ++D ++ A+ + +G + +P S ++F Y Sbjct: 212 EMEDVTVLDLSRLGFTQMLKAERAIWNEQEAMWEFFNGNILTLTPSGSTTS-VEFDRYLY 270 Query: 229 QTESANSSTIVLKANDQNLS---FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIF 285 S L + N++ + + + + ++ T + ++F Sbjct: 271 PLTSGPIRVAKLPKDANNMTVAQAMEAASIYTDAGNRKEARRLKVRIQEKFTFPMSCLVF 330 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC 345 GLI K + + ISL + ++ S+ + P+L ++ Sbjct: 331 GLIGSSLGAKP--NSRTSRTQGFGISLLLILA-YYTLSFSFSSLGVTGTLTPMLAAWVPV 387 Query: 346 ISSI-FLLMIKKKYTK 360 S+ ++ ++ ++ Sbjct: 388 FISLAGGGLLLRQASR 403 >gi|78356992|ref|YP_388441.1| permease [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219397|gb|ABB38746.1| permease, putative [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 359 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 47/362 (12%), Positives = 111/362 (30%), Gaps = 12/362 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+LR +++ I + + R++ + L ++L IP + Sbjct: 1 MSILSRYLLRTNLFLTMLTLTIGTGIYLLSDLFDRLDDFLGAGLGLKVILTYFAVKIPLI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P F + L M R+ EL+ + G S + L + + A++ S + Sbjct: 61 ISQILPAVFLLSAVIQLCVMARDRELVALQAGGISFLRLARFFIIYALIWSAVQLGFSQV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + ++ + ++ + + I + +P V Sbjct: 121 LGIYGEREASRIWKEQVRNREIDEVQLTNLWFTEHGRIIHLETLHPAAQKGSGITVYELT 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKF-KSYTLQTESANSSTIV 239 + G + DG + + ++ + Sbjct: 181 PDELSVQRVIRGKSFRADSSGWTLDGCDILIPGSYEVATSESIVLPIEQDVKAFSIVDPR 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + L L + +E R+ +H +L+ V L+++ Sbjct: 241 GDPSRLPLWQLQDA-IARLTESGSNVEALRTAWHMKLSYAFSLVTMALLALALITW---- 295 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF----LFCISSIFLLMIK 355 + + SL + F VF+ + + +N P+ + F +S+I L+ Sbjct: 296 -RDSIYINVGTSLLLVF-VFYTLFTVGGSLGENGIVPPLFAAWTANAFFSLSAIARLIYV 353 Query: 356 KK 357 + Sbjct: 354 SR 355 >gi|126462313|ref|YP_001043427.1| permease YjgP/YjgQ family protein [Rhodobacter sphaeroides ATCC 17029] gi|126103977|gb|ABN76655.1| permease YjgP/YjgQ family protein [Rhodobacter sphaeroides ATCC 17029] Length = 364 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 43/362 (11%), Positives = 98/362 (27%), Gaps = 12/362 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 YI R R + L + +I +L ++ S +L +S +P L Sbjct: 2 ILSRYIARRFLRMVFIVFLAFFGLMMLIDVLDQMRRFSDEGITLVQAGLLSLLRVPATLY 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + + + R++EL+++ G S + + + +A+ L N I Sbjct: 62 TILPLIVILAAVALFLGLARSSELVVVRAAGRSGLRFLVAPMVVALALGTVAVTVLNPIV 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFR-----LDDDLYIKISKYNPNNTLQGIFIVD 177 + + + I + N + T Sbjct: 122 AGTSRQYDAAAGRLARGEASILSISKEGLWLRQGGSGEQTVIHALRSNTDGTRLYAVTFL 181 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD--ISIMKFKSYTLQTESANS 235 + D + + L+R L+ + + + + S+ T + Sbjct: 182 TFDAEGRPTGRIAAEQAALERGYWQLSGAKSWDLTEANPEARASLPGNLRVTSELTREGI 241 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + + L +R L++ A Sbjct: 242 QDSFGDPSAIPIWEL-PAYVAGLERAGFSARKHRVWMQMEFALPATLAAMVLVA--AGFT 298 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLM 353 R + ++L F +F+ ++ Q P + L + L+ Sbjct: 299 MRHSRFGGTGRMVLLALLGGFSLFFLRNFAQVLGENGQIPILLAAWSPPLIGVMGSLGLL 358 Query: 354 IK 355 + Sbjct: 359 LH 360 >gi|260772182|ref|ZP_05881099.1| predicted permease [Vibrio metschnikovii CIP 69.14] gi|260613049|gb|EEX38251.1| predicted permease [Vibrio metschnikovii CIP 69.14] Length = 367 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 49/347 (14%), Positives = 120/347 (34%), Gaps = 19/347 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + ++ + S ++L I +P + Sbjct: 2 IIVRYLIRETLKSQFAIFFVLFLVFLSQKFIRVLADASDGEIPARMILSIVALNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LAI+ S + + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLAIITSSAAAFNAFWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD--SRD 180 P + QL + + L++ F R D + N LQ +F+ R Sbjct: 122 PWSQDKEAQLIEQLAAESSVDLLQKGQFQRSPDGSSVVFIDNIENRKLQNVFVAQLAPRQ 181 Query: 181 TQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + ++ SG + RQ I +++G + P D I +F Y + Sbjct: 182 SILPSVMFSDSGEVKELSDGRQMITMHNGVRYEGVPTRLDYMITRFDQYEGLIGQRSVKA 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L+ ++E R++ + L++++ A Sbjct: 242 KGRDWQETPTLALIR----------NPDSRAQAELQWRISL---VLCIPLLTMLVVPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 + ++ + + ++ I F S + + ++ + ++ Sbjct: 289 VNPRQGRFAKMGPAILIYLTYFLTISAMKSAL-EDGTIPIEIGMWPI 334 >gi|120553895|ref|YP_958246.1| permease YjgP/YjgQ family protein [Marinobacter aquaeolei VT8] gi|120323744|gb|ABM18059.1| permease YjgP/YjgQ family protein [Marinobacter aquaeolei VT8] Length = 353 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 43/355 (12%), Positives = 105/355 (29%), Gaps = 4/355 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y++R +G + + + ++ + + + + + + L +P Sbjct: 1 MHKIDGYVMRTVGGAMFLVMVVVLSLDVIFAFIAELED-TRNEYQTLQALWYVALTLPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P M L SM ++EL +I G S ++ + A+++ + Sbjct: 60 IYDYLPLGAFMGCLVGLGSMASSSELTVIRAAGVSLKRIVWSAMKPALIVVLLGVAIGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + A A A + E ++ R + + Sbjct: 120 VAPTTERIAQSDKAVALGAGSSVASAEGVWHREGNTFMHLNAVQPNGVLHGVSLFRFDDA 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 Q +A+ D +L + R P + + + S +++ Sbjct: 180 RQLQVASFAERAIYQGD--YWLLENVTSTRIEPERTVRDVSASLRWETGLSPSVLSVLIV 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K + +++ L + Y F K+ L + L++I Sbjct: 238 KPENLSMTGLY-TYAAYLGEQGLSAAQYWLAFWKKALMPLGTAVMVLVAISFVFGPLRSV 296 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + + F + + I +L + +LM + Sbjct: 297 TMGFRVFTGLLVGLLFKYMQDLLGPMSMVYGFNPLIAVLAPIVVNGIVGAVLMRR 351 >gi|312968689|ref|ZP_07782898.1| conserved hypothetical protein [Escherichia coli 2362-75] gi|312286907|gb|EFR14818.1| conserved hypothetical protein [Escherichia coli 2362-75] Length = 359 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 48/354 (13%), Positives = 121/354 (34%), Gaps = 3/354 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N + I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVDVEIFHYRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + IL+ + + + ++ S N + + Sbjct: 181 DLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETQETSDYLAWQSTFTSMNLEELSM 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + YR ++L Q + + L+++ Sbjct: 241 PGNTFSVRQL-NHYIHYLQETGQPSSEYRLALWEKLGQPILTLAMILLAVPFTFSAPRSP 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + + + + + + +++ P+ L L + L + Sbjct: 300 --GMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSL 351 >gi|114326914|ref|YP_744071.1| hypothetical protein GbCGDNIH1_0250 [Granulibacter bethesdensis CGDNIH1] gi|114315088|gb|ABI61148.1| hypothetical membrane spanning protein [Granulibacter bethesdensis CGDNIH1] Length = 355 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 54/358 (15%), Positives = 118/358 (32%), Gaps = 4/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E Y ++ +S + + + +++ +Q++ V + IP Sbjct: 1 MKK-ERYAAMAALKAVGLSAIALTALFSLLEFVQQLASVGQGRYGMLDAAIYVALTIPYR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V P + T L + RN EL + G S +I V+ +I L + LF+ Sbjct: 60 LLQVFPVSMLIGTLLGLGGLARNGELTALRGLGMSERRIILSVIAFSIPLMVILFLMAQF 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + A L T + ++ F+ D ++ I + ++ I I Sbjct: 120 VIPPAQREAQTWRSNA-LPDTTALRSQDSFWAYGDRHFLNIQHFEHHDEPYNIDIFSFAP 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 Y + L +L+D + + +T + + L Sbjct: 179 DGELHRYLHAQSADILPNDRWVLHDVLSRTLVDGQLRKAHLDRLDWTPFLTPQQTQFLRL 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + + L ++ R Y E +++ L + + + V+ Sbjct: 239 RPDAMPPLAL-WRYVHSLKQRGLQAIRYEQELWAKISIPLTMMAMVIAATPFVFGGGRVQ 297 Query: 301 QRKKIHPIFISLSISF-GVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ + F V ++ + NP + L I L +++ Sbjct: 298 NTGAFIALGAAIGVVFTLVQQISGHLDVLLNLNPAVTALTPPVLLMWLGIDLFYRRQR 355 >gi|229588598|ref|YP_002870717.1| putative ABC transporter membrane protein [Pseudomonas fluorescens SBW25] gi|229360464|emb|CAY47321.1| putative ABC transport system, membrane protein [Pseudomonas fluorescens SBW25] Length = 359 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 45/361 (12%), Positives = 115/361 (31%), Gaps = 8/361 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + L I+ +A + + + V S T ++ +L P Sbjct: 1 MAKLDRYIGSSVLIAILAVLGIILGLASLFAFIDEVGNV-SDTYTVWDVLSYVALTAPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L S+ ++EL I+ G S ++ V+ +LL + Sbjct: 60 LYDMMPMAALIGCLIGLGSLASSSELTIMRAAGVSIGRIVWAVMKPMLLLMACSVLIGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +T + A AQ + + L+ R ++ + + ++ Sbjct: 120 VAPPAETTAQANRALAQGSGDAQSSKHGLWHRQGEEFIHINAVQPGGLLIGVTRYTFDKE 179 Query: 181 TQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + +A+ ++ + + + ++ + + + + + + Sbjct: 180 RHLLESSFAKRAQYSGEKWQLSDVTTTYFRNIGQGTNARTEVINVPSEEWDIALKPELLN 239 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 T+V+ +S L + + Y F ++ Q + L++I Sbjct: 240 TVVMIPESLPISGL-WSYIHYLKDQGLNNGRYWLAFWVKVLQPVVTAALVLMAISFIFGP 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R +F + + F + + L I ++ + + Sbjct: 299 L--RSVTLGQRVFTGVLVGFTFRIAQDLLGPSSLVFGFSPLFAVLVPTAICALAGFWLLR 356 Query: 357 K 357 + Sbjct: 357 R 357 >gi|91977435|ref|YP_570094.1| permease YjgP/YjgQ [Rhodopseudomonas palustris BisB5] gi|91683891|gb|ABE40193.1| permease YjgP/YjgQ [Rhodopseudomonas palustris BisB5] Length = 361 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 44/357 (12%), Positives = 102/357 (28%), Gaps = 10/357 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y S L + + + + + S ++ + S Y +P + Sbjct: 3 MNTLGRYFAARFVTSALGVFFGLFVLLVFVDYIDLLRRAGGLAVSALVIAQASFYRVPQL 62 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + PFC + +++R+ EL+I G S + P L+ A+ L +F N Sbjct: 63 LERLMPFCILIGGMTCYLALSRSLELVIARAAGLSAWEFVSPALWSALALGVFASAVFNP 122 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFR----LDDDLYIKISKYNPNNTLQGIFIV 176 + + KQ+ A+ + S + + F+ + I ++ + V Sbjct: 123 MSAYMQERAKQMEAELFGQGSGSLQDASGFWMNQVSPEGQSIINAARSQQQGAVLSGISV 182 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + ++ L+ +L D + A Sbjct: 183 FRFEPDFQFKDRIEAREAVLEPGHWLLRDVRRYTLDSAPVQEDTF---RLPTALTLAQVR 239 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + YR ++HK L + +++ + Sbjct: 240 NSFATPESVSFWQLPS-YIRASESSGFATSGYRLQYHKLLAKPFLLAAMVMLAASVSL-- 296 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 R + + F ++ + + C+ + + Sbjct: 297 RFFRFGGVQKMVLSGVGAGFLLYILSKVTEDLSKAELMHPLAAAWLPVCVGGLAGFL 353 >gi|107103348|ref|ZP_01367266.1| hypothetical protein PaerPA_01004417 [Pseudomonas aeruginosa PACS2] Length = 362 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 43/356 (12%), Positives = 120/356 (33%), Gaps = 25/356 (7%) Query: 12 IGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAM 71 + + ++ I + ++ + + L I + IP L ++ P + Sbjct: 1 MLVTMSAVSAVLLVIIMSGRFIKYLAQAAQGLLDPGSLFLIMAFRIPGFLQLILPLGLFL 60 Query: 72 ETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQ 131 + +E+ ++ TG S+ L+ + A+L++I + + P+ + Sbjct: 61 GILLAYGRLYLESEMTVLSATGMSQKRLLGYTMAPALLVAILVAWLSLFLAPQGINQFAL 120 Query: 132 LSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQS 191 L K F L F + D + ++ + + I S+ Sbjct: 121 LLNKQDTLTEFDTLVPGRFQAMRDGTRVTYTEELSKDRGELAGIFISQKDLNSSNQERGI 180 Query: 192 GSID----------LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + + +IL++G + +P + +++ +Y + +S+ V + Sbjct: 181 SILVAEKGTQNIQADGSRYLILHNGYRYDGNPGQANYRAIQYDTYGVMLPKPEASSEVSE 240 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + + L Y++E RL+ L + L+++ + + Sbjct: 241 RDAVPTADLF----------GSDNPRYQAELQWRLSTPLLVFVVTLLAVPL---SRVNPR 287 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMIK 355 + + + ++ + G + ++ + P I + ++ ++ LL Sbjct: 288 QGRFLKLLPAILLYMGYLALLIAVRGQLDKGKIPMAIGLWWVHGLFLAIGLLLFYW 343 >gi|218696688|ref|YP_002404355.1| hypothetical protein EC55989_3395 [Escherichia coli 55989] gi|218353420|emb|CAU99485.1| conserved hypothetical protein; putative membrane protein [Escherichia coli 55989] Length = 386 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 49/360 (13%), Positives = 126/360 (35%), Gaps = 3/360 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ V+ + + +P Sbjct: 28 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVNPGGYRWTQAVLVVLMTLPRT 87 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 88 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 147 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 148 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 207 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + IL+ + + + I+ ++ S N + + Sbjct: 208 DLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLEILDNLAWQSTFTSMNLEELSM 267 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N N + YR ++L + + L+++ Sbjct: 268 PGNSFSVRQL-NHYINYLQETGQPSSEYRLALWEKLGHPILTLAMILLAVPFTFSAPRSP 326 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + + + + + + +++ P+ L L + L++ + + Sbjct: 327 --GMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVAALGLPMAFVLAALILVYLFDR 384 >gi|83596032|gb|ABC25390.1| predicted permease YjgP/YjgQ family superfamily [uncultured marine bacterium Ant39E11] Length = 359 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 45/359 (12%), Positives = 104/359 (28%), Gaps = 6/359 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK-ISGYLIPT 59 M + YIL +F + I+ IA V + Q+++ + +L +L I Sbjct: 1 MNRVDRYILSKFLGNFALFMGLIMLIAMVFDVSQKLDDFMDNDLNLATILLDYYLNFIAF 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + + T M E+ + G S L++P L A ++ + + Sbjct: 61 YGNTFSALILFLSTVFFTARMANQGEISAMLTGGLSFGRLMRPYLIGAAVICLASASLSH 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 I P S+ S L + Sbjct: 121 FIIPGTNSSRIAFEEAYIQHRVTSRPIHLHRQVLPGHFIYVETWSPDRMGGYNFTYEHFE 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD-ISIMKFKSYTLQTESANSSTI 238 + A D + + +++ + + ++ + S+ Sbjct: 181 QGRMVDRLKASFIKYDSAKTSWHMDNWTLRQWQSNGHMSLTSGVRLDSSFAFLPQQFSSN 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 L E + Y E+++R L I LI+ A + Sbjct: 241 NRGIETMTSPELYKALKQVRLSGSEAVLFYEMEWYRRSAYPLSAFILVLIAAAMA---SR 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 ++ I + L ++ ++ + + P++ +++ I + + M+ + Sbjct: 298 SQRGGIGAQIALGLLVAV-LYIFLMQLSSTLASTHVTSPLVAVWVPNILFLGVAMLAYR 355 >gi|326568200|gb|EGE18282.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis BC8] Length = 442 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 48/368 (13%), Positives = 129/368 (35%), Gaps = 21/368 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + + F+V I ++++ + + ++ +L ++ GY P L Sbjct: 62 ILRRYMTTQVASTTALVLGFLVVILLGGRLIRYFGMAAEGGLNVGVLFRLIGYNFPYFLE 121 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + V + + E+ +++ +G SR + + ++ L ++L + + Sbjct: 122 LILPLSFFIGLMLVFGRLYTDHEMTVMNASGISRGRVARLLMPLVVVLMCIEGWVSMVAK 181 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISK-----------YNPNNTLQ 171 P + + +A F + F D +T + Sbjct: 182 PWGMERATNIWQEQSVAQVFDLIRPQEFISSGDYHLYVGEMGANREFLKDVIIIQMHTAE 241 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAII---LNDGEVHRKSPISKDISIMKFKSYTL 228 I + + I +A+S + I L G + P S+ S + F+ Y + Sbjct: 242 PSDIQSRQSHKRDSIIFAKSATHVETGNGQIQLDLQQGRRYEVDPTSRQYSQIGFERYRM 301 Query: 229 QTE-SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGL 287 T ++ + + LL+ + + + + +E RL+ ++ Sbjct: 302 TLSVKPPEGTSHIRIEGVSTTELLS--IIQGHSKRDNPQEAYAELGYRLSMPWLILLAI- 358 Query: 288 ISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCIS 347 ++A + ++ + + + ++ I + I + P++YL + Sbjct: 359 --LLATPLSYVRPRQGRWYKLVPAILIYVAGVLVVISLKDTIAK-GKLSPVIYLAALLMM 415 Query: 348 SIFLLMIK 355 + + + Sbjct: 416 MVVAMYLN 423 >gi|83953613|ref|ZP_00962334.1| permease, YjgP/YjgQ family protein [Sulfitobacter sp. NAS-14.1] gi|83841558|gb|EAP80727.1| permease, YjgP/YjgQ family protein [Sulfitobacter sp. NAS-14.1] Length = 365 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 44/357 (12%), Positives = 112/357 (31%), Gaps = 16/357 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 LY R F++ + + ++ ++ + SS L ++ P + Sbjct: 2 ILHLYFARRFIMGFILISAVLFSLLVLVDMVDQARRFSSYDIGWLRLFGMTLLKTPETMN 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + T + S+ R++EL++ G S ++ ++ +++A ++ + N I Sbjct: 62 LILPLIMILATVVLFLSLARSSELVVTRAAGRSALSALQAPIWVAFIIGVMAVGMLNPIV 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-------LYIKISKYNPNNTLQGIFI 175 QLS + T + L + S + + F+ Sbjct: 122 AATAKRYIQLSDSIRAGGTSVLSVSDEGLWLRQGSDEGQTVIRAWRSNKDASVLYDVTFL 181 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI---SKDISIMKFKSYTLQTES 232 + ++ + A S ++ + L D + + Sbjct: 182 SYAPESGPARRIEADSAAL--EDGIWTLTDAKSWPLEVGVNAEGAAETFDTLTLPSTLTL 239 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + ++ L + ++ L + F V L++ Sbjct: 240 DRIRDSITDPGAVSIYDLPD-YIKQLELAGFSPRRHKVWLQTELARPFFLVAMVLVASAF 298 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 R + S+ + FG+++ S+ + +N +L + ++SI Sbjct: 299 --TMRHTRFGGTGVAVLASVLMGFGLYFIRSFAQ-ILGENGQIPVLLAAWAPPVASI 352 >gi|330448737|ref|ZP_08312384.1| putative transmembrane possibly involved in transport conserved inner membrane protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492928|dbj|GAA06881.1| putative transmembrane possibly involved in transport conserved inner membrane protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 366 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 53/357 (14%), Positives = 122/357 (34%), Gaps = 21/357 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R +S + + + + ++ + S + ++++ + G IP++ Sbjct: 2 IIVRYLTRETLKSQIAVLFVLFLVFISQKFIRILADASDGSIPSDLIMTLMGLSIPSMAL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG L++ L LAI+ ++ + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGMGNKLLLQSALALAIITGSIAAVNALWLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD----LYIKISKYNPNNTLQGIFIVDS 178 P + ++Q+ KA+ + L + F + D I++ + I + + Sbjct: 122 PWSQDHVEQVMEKAKAGPGLNMLVKGTFQQTPDGKGVVFVDDITEKGSKLSKVFIAQLKA 181 Query: 179 RDTQTHKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 +T + A G I RQ + LNDG + P + SI F +Y Sbjct: 182 TETLQPSVMVADRGLITEQPDGRQMLELNDGTRYEGIPTQLNYSITHFNNYQALIGQREV 241 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 L+ E ++E R + + L+ ++ Sbjct: 242 KQGNRDWEALPTLDLM----------KESNLAAKAELQWRFSL---ILCIPLLVMIVVPL 288 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFL 351 A+ ++ + + ++ I F S IE I ++ + L Sbjct: 289 SAVNPRQGRFAKLAPAVLIYLAYFLAISSAKSAIEDGIIPSGIGMWPINIATLLVAL 345 >gi|300973447|ref|ZP_07172203.1| conserved hypothetical protein [Escherichia coli MS 45-1] gi|301048206|ref|ZP_07195242.1| conserved hypothetical protein [Escherichia coli MS 185-1] gi|300299964|gb|EFJ56349.1| conserved hypothetical protein [Escherichia coli MS 185-1] gi|300410789|gb|EFJ94327.1| conserved hypothetical protein [Escherichia coli MS 45-1] gi|315291259|gb|EFU50619.1| conserved hypothetical protein [Escherichia coli MS 153-1] Length = 359 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 49/354 (13%), Positives = 121/354 (34%), Gaps = 3/354 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 GASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + IL+ + + + ++ S N + + Sbjct: 181 DLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETQETSDYLAWQSTFTSMNLEELSM 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + YR ++L Q + + L+++ Sbjct: 241 PGNTFSVRQL-NHYIHYLQETGQPSSEYRLALWEKLGQPILTLAMILLAVPFTFSAPRSP 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + + + + + + +++ P+ L L + L + Sbjct: 300 --GMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSL 351 >gi|257095655|ref|YP_003169296.1| permease YjgP/YjgQ family protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257048179|gb|ACV37367.1| permease YjgP/YjgQ family protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 357 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 46/361 (12%), Positives = 117/361 (32%), Gaps = 8/361 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y+ R + + L+ L + + +L I V L+ IP Sbjct: 1 MKLYRRYVGREVMGAVLLVLLGFLALFAFFDMLGEIRNVGQGGYQLHHAFAFVLLRIPGR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + T L+++ R++E+ ++ +G S L+ + +A +L++ F+ Sbjct: 61 VYELMPIAVLIGTLYALSTLARHSEITVLRVSGLSSGGLLTVLFQVAGVLAVLTFLIGEY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P QL +K + + L L+ + + D Sbjct: 121 VAPPSERAAFQLRSKERTGMVGQDLRSGLWVKDERSFINVRIVLPDTRLRGIRIFEFDED 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + A G + + L + ++ + + + +++ Sbjct: 181 AKLRSMTEAAEGEYVVPD-SWRLTNVVQTVLEGGRAEVRSVPDMQWRSALNPDILAVLLV 239 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + +L L + + + Y F K++ L ++ +++ A R Sbjct: 240 SPDRMSLRHL-SAYTKHLADNHQTTNRYDIAFWKKVIYPLAGLVMVALALPFG--GAHSR 296 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF----LLMIKK 356 IF+ + I + N + + + + + ++K Sbjct: 297 VEGVGLKIFVGVMIGTLFHMLNGLFSNLGAINHWSPLLSAATPSILFLLAATAMIWWVEK 356 Query: 357 K 357 + Sbjct: 357 R 357 >gi|313203772|ref|YP_004042429.1| permease yjgp/yjgq family protein [Paludibacter propionicigenes WB4] gi|312443088|gb|ADQ79444.1| permease YjgP/YjgQ family protein [Paludibacter propionicigenes WB4] Length = 367 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 128/352 (36%), Gaps = 6/352 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 +K + YI++ ++ S + I+ I+ V I ++++ S L I+L IP Sbjct: 11 LKRIDTYIIKKFLGTYFFSIVLILSISVVFDITEKLDNFVSHNAPLKAIVLDYYLNFIPF 70 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + M +P + + M NTE++ I ++G S L+ P + A +++ F Sbjct: 71 YMNMFSPLFTFIAVIFFTSKMATNTEIIAILSSGVSFRRLMLPYMISAAVIATISFTLGG 130 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P + K + NL + + + I ++ +N F ++ Sbjct: 131 FVIPHGTKKMLDFEDKY-VRQIKQSNATNLQMEVAKGVIMYIGRFEVSNNTGYQFSLEKF 189 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + +T + +++ + + + I+ K T+ + Sbjct: 190 EGKTLASRLTAETITWDSLYSWKISNYLQRDFNGMREQITKGISKDTTIMVQPEEFYITA 249 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 +A ++ L + ++ + +++KR + L I LI + + Sbjct: 250 AEAPQMSIVKLGSYLKRQRERGVGNIKLFEDDYYKRFSMPLAAFIMTLIGVSL---SSRK 306 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + + + L++S ++ FS + N +++ + + + Sbjct: 307 VRGGMGLHLGVGLALS-AIYILFSAMSTSFSVNGSMSAFAAVWIPNVVFLLV 357 >gi|317477038|ref|ZP_07936280.1| hypothetical protein HMPREF1016_03264 [Bacteroides eggerthii 1_2_48FAA] gi|316906831|gb|EFV28543.1| hypothetical protein HMPREF1016_03264 [Bacteroides eggerthii 1_2_48FAA] Length = 393 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 50/363 (13%), Positives = 118/363 (32%), Gaps = 7/363 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 +K + YI++ +++ + I+ IA V ++++ S I+ IP Sbjct: 35 LKRLDWYIIKKFLGTYVFAIALIISIAVVFDFNEKMDRFMSHEAPWEAIIFDYYMNFIPY 94 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + +TG S +++P + A ++++ F + Sbjct: 95 FANLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMLRPYMVSAAIIAVTTFCLGS 154 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + PK T K + + + + T + + Sbjct: 155 YVIPKGSVTRLNFEDKYYKPRKSTTARNIQLEVDSGVIAYIERFEDYSKTGYRFSLDKFK 214 Query: 180 DTQTHKIYYAQSGSIDLDR-QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 D Q A+S + D + D + + + I + L E A+ + Sbjct: 215 DKQLVSHLTARSITYDTATVHKWTVKDYMIREMDGMRESIVKGEKMDTILFMEPADFLIM 274 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + L ++ + E+HKR+ I LI + + Sbjct: 275 KNQQEMLTSPQLSEYINRQRQRGFANIKEFEIEYHKRIAMSFASFILTLIGVSL----SS 330 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF-CISSIFLLMIKKK 357 + + + + F I N P + +++ + + + KK Sbjct: 331 KKTKGGMGLHLGIGLGLSFSYILFQTIASTFAVNGNVPPFIAVWIPNLLYAFIAFYLYKK 390 Query: 358 YTK 360 K Sbjct: 391 APK 393 >gi|258542096|ref|YP_003187529.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-01] gi|256633174|dbj|BAH99149.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-01] gi|256636231|dbj|BAI02200.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-03] gi|256639286|dbj|BAI05248.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-07] gi|256642340|dbj|BAI08295.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-22] gi|256645395|dbj|BAI11343.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-26] gi|256648450|dbj|BAI14391.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-32] gi|256651503|dbj|BAI17437.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654494|dbj|BAI20421.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-12] Length = 370 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 40/358 (11%), Positives = 100/358 (27%), Gaps = 13/358 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTVL 61 + YI R S + + I + + + V++ S N++ +I+ +P Sbjct: 6 TLSRYIARQFVFSVVAMIASLTGIVCLFDFIDLLRRVATKPDVSTNVVTEIAALHVPYFA 65 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF + + R++EL++ G S + + A+L+ + + Sbjct: 66 TEILPFGMLLGGIVCFWRLTRSSELIVARAAGISAWQFLTAPVACAMLIGAVFTTLISPV 125 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--R 179 ++L + + L +G+ + D R Sbjct: 126 SSSMYRRAEELDQQYLRTGGGPLSLSSGSLWLRQSDSQYDPHGVAMLHARGVQLKDGLLR 185 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI------SKDISIMKFKSYTLQTESA 233 + + +A G + + + + Sbjct: 186 IRNVSVFRLDHQDKLMMRIEAPEGYLGTLKWILSDASVVRPNDLLHHVGQIDLPTDLTVN 245 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 ++ L + + +R F L + L++ A Sbjct: 246 RVQESFSSPETLSVWAL-PGFISLLDRSGFSSIRHRIHFQSLLALPMLAGTMALVA--AG 302 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 R+ I ++ F +F S + + + P+L + ++ + L Sbjct: 303 FSMRPSRRGGVARMIGSGVAAGFLLFTV-SKVAEQFGNSGALPPMLAAWAPTLAGLCL 359 >gi|312959169|ref|ZP_07773688.1| membrane protein [Pseudomonas fluorescens WH6] gi|311286939|gb|EFQ65501.1| membrane protein [Pseudomonas fluorescens WH6] Length = 359 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 48/361 (13%), Positives = 119/361 (32%), Gaps = 8/361 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + L I+ +A + ++ + + + T ++ +L P Sbjct: 1 MVKLDRYIGSSVLIAILAVLGIIIGLASLFAMVDEMKSI-NDTYTVWNVLNYVLLTAPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L S+ N+EL I+ G S ++ V+ +LL + + Sbjct: 60 LYEMMPMAALIGCLIGLGSLASNSELTIMRAAGVSIGRIVWAVMKPMLLLMVCSVLIGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +T + A AQ + + L+ R D+ + + ++ Sbjct: 120 VAPPAEATAQANRALAQGSGDAQSAKHGLWHRQGDEFIHINAVQPGGLLIGVTRYRFDKE 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHR----KSPISKDISIMKFKSYTLQTESANSS 236 +A+S ++ + R + S ++ + + + + + + Sbjct: 180 RHMLSSSFAKSAQYSNEKWQLTDITTTYFRNVGQGTQASTEVINVPSEEWGISLKPELLN 239 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 T+V+ +S L + + Y F ++ Q + L++I Sbjct: 240 TVVMIPESLPISGL-WSYIHYLKDQGLNNGRYWLAFWVKVLQPVVTAALVLMAISFVFGP 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R +F + + F + + + L I ++ + + Sbjct: 299 L--RSVTLGQRVFTGVLVGFIFQIAQNLLGPLSLVFGFSPLFAVLVPTTICALAGFWLLR 356 Query: 357 K 357 + Sbjct: 357 R 357 >gi|218691270|ref|YP_002399482.1| hypothetical protein ECED1_3629 [Escherichia coli ED1a] gi|218428834|emb|CAR09635.1| conserved hypothetical protein; putative membrane protein [Escherichia coli ED1a] Length = 386 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 49/354 (13%), Positives = 123/354 (34%), Gaps = 3/354 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 28 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 87 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 88 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 147 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + + N+ + + ++ + N G+ I RD Sbjct: 148 VASPLQQQALQIKSTATALGEDNDIIGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 207 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + IL+ + + + ++ S N + + Sbjct: 208 DLSLESYIYARSATIKDDKTWILHGVNHKKWLNGKETLETSDNLAWQSTFTSMNLEELSM 267 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + YR ++L Q + + L+++ Sbjct: 268 PGNTFSVRQL-NHYIHYLQETGQPSSEYRLALWEKLGQPILTLAMILLAVPFTFSAPRSP 326 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + + + + + + +++ P+ L L + L + Sbjct: 327 --GMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSL 378 >gi|302345342|ref|YP_003813695.1| permease, YjgP/YjgQ family [Prevotella melaninogenica ATCC 25845] gi|302149873|gb|ADK96135.1| permease, YjgP/YjgQ family [Prevotella melaninogenica ATCC 25845] Length = 405 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 117/358 (32%), Gaps = 7/358 (1%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPTVL 61 + YI++ +++ + L I+ IA V + ++ + I+ +P Sbjct: 47 ILDWYIIKKFIGTYIYAILLIISIAIVFDFNENLSKFTQYHAPWRAIIFDYYANFVPYYS 106 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + +P + + + N+E++ + G S L++P + IL++ F + + Sbjct: 107 NLFSPLFVFIAVIFFTSKLAGNSEIISMMAAGMSIRRLMRPYMISCILIAGLTFYLNSFV 166 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + + + + E F + + G +V +++ Sbjct: 167 IPHGTVIRQNFESLYRNSKKNTSAENVQLFVAKNTTAYIQHYDDQYKRGYGFSLVKTKNK 226 Query: 182 QTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + A D + +++ ++ + + I K L E + Sbjct: 227 KIVSHMTAMEIQYDTVADTKYHWKVSNWKIRTLKGLKEHIQSGASKDTVLLMEPTDLVYS 286 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + LLN + + Y EFHKR+ I +I + + Sbjct: 287 KGQQETFTSPELLNYISKQTSRGSGNVVQYEVEFHKRIAMSFSSFILTIIGLSL---SSR 343 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R+ + I L++SFG + ++ + I +I + Sbjct: 344 KRKGGMGLYLGIGLALSFGYIMLQTVSATFAIKDDTPPILAAWIPNIIFAIIAYFCYR 401 >gi|326559485|gb|EGE09908.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis 7169] gi|326566095|gb|EGE16252.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis BC1] gi|326567798|gb|EGE17902.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis 12P80B1] gi|326572163|gb|EGE22159.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis BC7] Length = 437 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 48/368 (13%), Positives = 129/368 (35%), Gaps = 21/368 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + + F+V I ++++ + + ++ +L ++ GY P L Sbjct: 57 ILRRYMTTQVASTTALVLGFLVVILLGGRLIRYFGMAAEGGLNVGVLFRLIGYNFPYFLE 116 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + V + + E+ +++ +G SR + + ++ L ++L + + Sbjct: 117 LILPLSFFIGLMLVFGRLYTDHEMTVMNASGISRGRVARLLMPLVVVLMCIEGWVSMVAK 176 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISK-----------YNPNNTLQ 171 P + + +A F + F D +T + Sbjct: 177 PWGMERATNIWQEQSVAQVFDLIRPQEFISSGDYHLYVGEMGANREFLKDVIIIQMHTAE 236 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAII---LNDGEVHRKSPISKDISIMKFKSYTL 228 I + + I +A+S + I L G + P S+ S + F+ Y + Sbjct: 237 PSDIQSRQSHKRDSIIFAKSATHVETGNGQIQLDLQQGRRYEVDPTSRQYSQIGFERYRM 296 Query: 229 QTE-SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGL 287 T ++ + + LL+ + + + + +E RL+ ++ Sbjct: 297 TLSVKPPEGTSHIRIEGVSTTELLS--IIQGHSKRDNPQEAYAELGYRLSMPWLILLAI- 353 Query: 288 ISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCIS 347 ++A + ++ + + + ++ I + I + P++YL + Sbjct: 354 --LLATPLSYVRPRQGRWYKLVPAILIYVAGVLVVISLKDTIAK-GKLSPVIYLAALLMM 410 Query: 348 SIFLLMIK 355 + + + Sbjct: 411 MVVAMYLN 418 >gi|320539288|ref|ZP_08038958.1| putative conserved inner membrane protein [Serratia symbiotica str. Tucson] gi|320030680|gb|EFW12689.1| putative conserved inner membrane protein [Serratia symbiotica str. Tucson] Length = 356 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 42/354 (11%), Positives = 113/354 (31%), Gaps = 2/354 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ + ++ V ++ + +P + + Sbjct: 5 LDRYIGKTIFNTIIMTLFMLVSLSGIIKFVDQLRRVGQGDYTVLGAGMFTLLSVPKDIEI 64 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 65 FFPMAALLGALLGLGQLATRSELVVMQASGFTRMQIAGSVMKTAIPLVLLTMAIGEWVAP 124 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + Q+ ++ + D + +I I + + L G+ I D + Sbjct: 125 QG-DQMAHDFRAQQMYGGSLLSTKSGLWAKDGNDFIYIERVSGEKELAGVNIYHFNDRRR 183 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 + + + D + + + + + L Sbjct: 184 LETVRYAATASFEDGVWKLSQVDTSDLTNEELVTGTQTLTGEWKTNLTPEKLGVVALDPT 243 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 ++ L N + Y+ ++ L + L+++ Sbjct: 244 SLSIKGLHN-YVKYLKQSGQEANRYQLNMWNKIFSPLSVAVMMLMALSFIFGPLRSVPMG 302 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P + L + + +++K+K Sbjct: 303 IRVVTGISFGFLFYVLDQIFGQLSLVYNMPPVLGALLPSMMFLLISMYMLLKRK 356 >gi|260779401|ref|ZP_05888292.1| predicted permease [Vibrio coralliilyticus ATCC BAA-450] gi|260604491|gb|EEX30791.1| predicted permease [Vibrio coralliilyticus ATCC BAA-450] Length = 367 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 42/353 (11%), Positives = 118/353 (33%), Gaps = 19/353 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L + + ++++ + S ++++ +P++ Sbjct: 2 IIVRYLIRETLKSQLAIFFILFLVFLSQKLIKVLADASDGDIPASLVMHYVSLSMPSMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LA++ + + + Sbjct: 62 LMLPLSLFLGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLAVITGVIAAANAFVFS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + + QL + + + L++ F D + L+ +F+ R Sbjct: 122 PMSQEKLIQLQEEVEAENSVDLLQKGQFQGTPDGSSVVFIDDIEGKQLKHVFVAQMRPRD 181 Query: 183 T-----HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + + RQ I + DG + P D + F Y + Sbjct: 182 SILPSVSFSQSGEVKELSDGRQVIRMYDGTRYEGVPTRVDYMVTDFDQYEGLIGQRDVKP 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 L++ ++E R++ V L++++ A Sbjct: 242 KGRDWEAIPTMQLVS----------NPDPRAQAELQWRISL---VVCIPLLTMLVVPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 + ++ + + ++ I F S + ++ + ++ + + Sbjct: 289 VNPRQGRFAKMGPAILIYLAYFLSISATKSAL-EDGSIPSFIGMWPINAALLL 340 >gi|261819786|ref|YP_003257892.1| permease YjgP/YjgQ family protein [Pectobacterium wasabiae WPP163] gi|261603799|gb|ACX86285.1| permease YjgP/YjgQ family protein [Pectobacterium wasabiae WPP163] Length = 370 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 57/353 (16%), Positives = 129/353 (36%), Gaps = 14/353 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N+++ + G +P ++ Sbjct: 2 IIIRYLVRETFKSQLAILFILLLIFFCQKLVRILGAAVDGEIPTNLVISLLGLGVPEMVQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ G + L+K L LA+ I I+ + Sbjct: 62 LILPLSLFLGVLMTFGRLYAESEITVMHACGLGKRVLLKAALVLAVFTGIIATINVMWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +++ A+A+ + L E F + + Q +F+ R + Sbjct: 122 PWSSRHQEEVLAEAKANPGMAALVEGQFQSAQGGNAVLFVGNVKGSEFQHVFLAQLRPSG 181 Query: 183 T--HKIYYAQSGSIDLDRQAII--LNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + A G I + A + L++G + + + +D I F +Y + Sbjct: 182 NARPSVVVADRGHITNEEGAQVVTLDNGSRYEGTALLRDFRITDFTNYQAVIGHQAVTLN 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 ++ L N + ++ R+EFH RLT L +I L+ + + Sbjct: 242 NSDVQQMDMRTLWNSDAHDA----------RAEFHWRLTLILSVLIMALMVVPLSVVNPR 291 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + + P + I F + K + +P L ++ +I L Sbjct: 292 QGRVLSMLPAMLLYLIFFLLQSSLRSNASKGKIDPMVWVWLTNLMYFGIAIML 344 >gi|262370181|ref|ZP_06063508.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] gi|262315220|gb|EEY96260.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] Length = 366 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 54/361 (14%), Positives = 122/361 (33%), Gaps = 17/361 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + + L+ + I ++++ + + IL I GY +P L Sbjct: 2 IIRRYLVKQVVSTSLVVIALLTLIMMGGRLIKYFGVAAQGRLDAGILFSIIGYRLPEFLT 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + V + + E+ +++ +G SR L + ++ + ++ + + Sbjct: 62 LILPLGFFIGLMLVFGRLYVDHEMAVLNGSGVSRNQLGRLLIPMTVVFLAVQAVLMLWMA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +QL+ + F + F L+ IF + + Sbjct: 122 PWGVRQFEQLTTSQAVRTGFDLVRPKEFISSGPYTIYAGDLSEDRKNLKDIFFYQRAEAE 181 Query: 183 THKIYYA-----QSGSIDLDRQAII-LNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 I+ D ++ L G + P S +F+SY L+ E+ + Sbjct: 182 GKPDVMILAKEATRVEIENDPANVVDLVQGRRYEIYPGQPRYSQAEFQSYRLRLENDKEA 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + L N N+P E R+ V+ ++A Sbjct: 242 KFESADVEALSTMKLWDNRNDPVVAS--------ELGWRIFVPFAIVVAL---LLAVALS 290 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + ++ + +F +L I + I ++ + I L L + L +K Sbjct: 291 EVSPRQGRYLKLFPALLIFASLIVALMAIKTRVSKEEVGIGAYPLILVIYAIAAALFSRK 350 Query: 357 K 357 + Sbjct: 351 Q 351 >gi|89094618|ref|ZP_01167555.1| hypothetical protein MED92_00295 [Oceanospirillum sp. MED92] gi|89081088|gb|EAR60323.1| hypothetical protein MED92_00295 [Oceanospirillum sp. MED92] Length = 358 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 44/354 (12%), Positives = 123/354 (34%), Gaps = 21/354 (5%) Query: 16 FLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTN 75 ++ I + ++ ++ ++ ++L I Y +P L ++ P + Sbjct: 1 MFAVSAVLLVIIMSGRFVKYLSRAAAGELDPSVLFSIMAYRLPGFLELILPLGLFLGFLL 60 Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAK 135 + +E+ +++ TG S+ L+ + AI +++ + + P S ++ Sbjct: 61 GYGRLYLESEMTVLEATGMSQKRLVSYSMGPAIFVAVIVGSLSLFVSPYGASETNKIFDD 120 Query: 136 AQLALTFSYLEENLFF-RLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQS--- 191 + L F + + + TL +F+ D + Sbjct: 121 QEGRSELESLVPGRFQKNKNTGRVTYTDEVKDDGTLGLVFMADRNHSTQRLQITVAETGS 180 Query: 192 --GSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSF 249 D ++ ++L +G + P D ++FK Y + E N K + Sbjct: 181 TLIDQDKGQRFLVLEEGYRYEGEPGQSDYVEVEFKRYGSEVERRNQEIRYDKVEALPTAM 240 Query: 250 LLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIF 309 L +++++ + RL+ + ++ L+++ + ++ + + Sbjct: 241 LW----------GSEEPSHQAQLNWRLSLPVLALVVTLLAVPL---SRVNPRQGRFARLV 287 Query: 310 ISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK--KKYTKI 361 S+ I S + + +++ F ++ L MI + ++++ Sbjct: 288 PSILIYLTYITILSNTTSNVSEGETSPLTIWIVHFVFAAFALNMILFGRFWSRV 341 >gi|302879722|ref|YP_003848286.1| permease YjgP/YjgQ family protein [Gallionella capsiferriformans ES-2] gi|302582511|gb|ADL56522.1| permease YjgP/YjgQ family protein [Gallionella capsiferriformans ES-2] Length = 377 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 43/357 (12%), Positives = 120/357 (33%), Gaps = 16/357 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + F+ ++ + ++ ++ I + Q+++ + S +++ +L + G+ L Sbjct: 18 RQFQRALVLEFAGNGVLVFAILLGIVVISQLIRFLGEAVSGKLAVDGVLALLGFSALNYL 77 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 ++ + L+ R++E+++ + G I+PV A + + + ++ Sbjct: 78 SVLLSMSLFIAILLTLSRCYRDSEMVVWFSAGIGLTRWIRPVALFAAPVVTVIALLSLVL 137 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P A+ + + L +F + + + I Sbjct: 138 SPWAMKRADDFKAQLESRDELATLTPGVFRESGQSDRVYFVETVDVGNGRIGNIFVRSVQ 197 Query: 182 QTHKIYYAQS----GSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + ++ + ++L +G + +P +D I++F+ Y ++ ESA S Sbjct: 198 NSQMGTMVAREGLQQTMPNGDRFLVLLNGTRYEGTPGERDYRIVEFERYAMRIESAASKQ 257 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 ++ + L SE RL + + L++I + Sbjct: 258 LLPNVRTLSTLELWR----------NPTRWNLSELEWRLGLPISAAVLSLLAISLSYVNP 307 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP--YYIPILYLFLFCISSIFLL 352 + + + + + + + + + +P I L L + F Sbjct: 308 RAGRSLNLVLAMVLYMLYSNMISVTNAWVGQGKLSPGIGLWGIHALMLLITALFFYY 364 >gi|331684625|ref|ZP_08385217.1| putative permease [Escherichia coli H299] gi|331078240|gb|EGI49446.1| putative permease [Escherichia coli H299] Length = 359 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 49/360 (13%), Positives = 121/360 (33%), Gaps = 3/360 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N + I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVDVEIFHYRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + IL+ + + + S N + + Sbjct: 181 DLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETQETSDNLPWQSAFTSMNLEELSM 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + YR ++L Q + + L+++ Sbjct: 241 PGNTFSVRQL-NHYIHYLQETGQPSSEYRLALWEKLGQPILTLAMILLAVPFTFSAPRSP 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + + + + + + +++ P+ L L + L + Y + Sbjct: 300 --GMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYWYDR 357 >gi|257095656|ref|YP_003169297.1| permease YjgP/YjgQ family protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257048180|gb|ACV37368.1| permease YjgP/YjgQ family protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 359 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 50/340 (14%), Positives = 115/340 (33%), Gaps = 17/340 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ + R + + I Q+++ +N + + + + + G+ LP Sbjct: 2 IFQRAVRREFAHAASGIFTALFAIMVTTQLIRLLNEAAQGGVAPDAVAALLGFASLNYLP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + + L+ R++E+++ ++G I+PVL AI L + + Sbjct: 62 PLLSLSMFVAILLTLSRCYRDSEMVVWFSSGLPLTAWIRPVLVFAIPLVATIAALSFFLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P S + K + + F + + +T Q + S + Sbjct: 122 PWAVSQSAEYRGKLSIRKDAGEVSPGTFHESSAGDRVVFVEGIAEDTSQVRNVFVSETKE 181 Query: 183 THKIYYA----QSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + I+L DG + +P S ++ I+++ Y ++ E+ + I Sbjct: 182 GRVGVTMAVTGHQEIAANGDRFIVLQDGRRYELAPASPEVRILEYVRYAVRLETKEARGI 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 L LL P L YR+E RL+ V+ L++I + + Sbjct: 242 TPTPKSMPLRELL----------PVDLPAYRAELLWRLSIPCSAVVMALLAIPLSF---V 288 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 + + + +++ + + + P+ Sbjct: 289 NPRAGRSANMLLAILVYLIYNNLLTISQGWVASGKVSFPV 328 >gi|192291843|ref|YP_001992448.1| permease YjgP/YjgQ family protein [Rhodopseudomonas palustris TIE-1] gi|192285592|gb|ACF01973.1| permease YjgP/YjgQ family protein [Rhodopseudomonas palustris TIE-1] Length = 362 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 46/356 (12%), Positives = 104/356 (29%), Gaps = 10/356 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y R + L + + + + + S + + S +P +L Sbjct: 5 NTLGRYFARRFVIASLGVFFGLFVLLVFVDYVDLLRRAGGLAVSAFYVAQASFCRVPQLL 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PFC + +++R+ EL++ G S I P L+ AI + IF N + Sbjct: 65 ERLLPFCILIGGMTCYLALSRSLELVVARAAGLSAWEFISPALWSAIAIGIFATTVFNPL 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFR----LDDDLYIKISKYNPNNTLQGIFIVD 177 + KQ+ A+ T + N F+ D I ++ + V Sbjct: 125 SAHMQERAKQMEAEMFGENTGGLQDANGFWMNQVSPDGQAIINAARSQQQGAVLTGITVF 184 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + ++ L+ +L + + D + A Sbjct: 185 RFEPDFQFKDRIEAREAVLEPGHWLLKNVRRYTMDGAPVDQDTL---ELPTSLTLAQVRN 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L ++ N YR ++HK L + +++ + Sbjct: 242 SFATPESVSFWQLPTYIKSSENSGFATAG-YRLQYHKLLAKPFLLAAMVMLAASVSL--R 298 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 R + ++ F ++ + + C+ + + Sbjct: 299 FFRFGGVQKMVLSGVAAGFLLYILSKVTEDLSKAELMHPLAAAWLPVCVGGLAGFL 354 >gi|328952245|ref|YP_004369579.1| permease YjgP/YjgQ family protein [Desulfobacca acetoxidans DSM 11109] gi|328452569|gb|AEB08398.1| permease YjgP/YjgQ family protein [Desulfobacca acetoxidans DSM 11109] Length = 401 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 55/360 (15%), Positives = 130/360 (36%), Gaps = 6/360 (1%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ R F + L I I ++ +I + + ++ + SL + K L+P +L Sbjct: 16 IIYRHLWRECWDIFAVGLLAITVIVFMGRITRVMQMIITKGVSLIDIGKFCVLLLPYLLL 75 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + ++ + E++ + +G S + L+ P+L A+++S Sbjct: 76 FTVPMAAMIAVLITFLRLSNDNEIMALKTSGVSVLQLLPPILAFALVISSTALFFSLYAT 135 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSRDT 181 P +++L ++ + E +F + + + +++ + ++G+F+ D RD Sbjct: 136 PWGNQEMRRLLSEVTKRRADLGIREQVFNNDFEHVVLFVNRVPTSGGPMEGVFLSDDRDP 195 Query: 182 QTHKIYYAQSGSIDLD----RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 Q A + D R + L G V R S + ++F++Y + E Sbjct: 196 QVPITIAADKALLLFDLKSERLIMQLFQGRVLRLSEDATSFHSIEFETYQVPLELFKFVP 255 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 ++ L L + E ++R + + I LI++ Sbjct: 256 KPKSEDEMFLGELRQALAQH-KPGTLDYNKLLVELNRRFSLPVGACIMILIAMPLGISTQ 314 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + + + + + + + P P L F+F + L ++ Sbjct: 315 IKGRAVGLIMGLVIFLLYYLLLTAAWRLGQHAIIPPGLAPWLPDFIFLFLAWGLWRRSRR 374 >gi|228472720|ref|ZP_04057478.1| permease YjgP/YjgQ family protein [Capnocytophaga gingivalis ATCC 33624] gi|228275771|gb|EEK14537.1| permease YjgP/YjgQ family protein [Capnocytophaga gingivalis ATCC 33624] Length = 359 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 39/362 (10%), Positives = 112/362 (30%), Gaps = 5/362 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL+ ++ L + I ++ ++ ++ + ++K + Sbjct: 1 MKIIDRYILKRYFLTYSALFLMFIPIGILVDYAEKNQKMTDNHAPTEAIIKYYANFVVHF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + + + TE++ + ++G S ++P + A +LS+F+ + Sbjct: 61 ANILFPIFLFLSVIWFTSKLAEKTEIVAMLSSGISYNRFLRPYFYGATILSVFVLLMGMF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + +S ++ S N + Sbjct: 121 VVPYSSGVYNEFYGTYLSKDLYSKGSRLYNQVNKNEYIYVSSFDANTNQGANFVLERFDG 180 Query: 181 TQTHKIYYAQSGSIDLDR--QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + A S + + L + + + + K L ++ + I Sbjct: 181 LRMTDKITANSIEWVQNDSVKTYRLYNYTHRKVGDWNDIYEKVYQKDTLLNFKTTDLLPI 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 A +N L + Y +++R I +I + ++ Sbjct: 241 EYAAETKNFFELNKFIAEERQKGSPNIRIYELVYYRRWAAIFNVFILTIIGVAV---SSV 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 ++ + + I F + E++ + + + ++ + + +K Sbjct: 298 KKRGGMGVNLAFGVLIGFSYVFFERIFGIMAEKSGITPLMAVIIPNAMFALLAVYMIRKS 357 Query: 359 TK 360 + Sbjct: 358 RR 359 >gi|315122195|ref|YP_004062684.1| permease protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495597|gb|ADR52196.1| permease protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 283 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 186/283 (65%), Positives = 222/283 (78%), Gaps = 1/283 (0%) Query: 80 MNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLA 139 MNRN EL IIDNTGTSRITLIKPVLF AILLSIFLFI EN +EPK R+ IK+L A+A L Sbjct: 1 MNRNAELFIIDNTGTSRITLIKPVLFFAILLSIFLFILENTLEPKYRTEIKRLGAQAYLN 60 Query: 140 LTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQ 199 LT S LEENLFF L+++ YIK+SK NPNNT+QGIF +DS D H+IYYA+SG +DL+++ Sbjct: 61 LTLSSLEENLFFNLNNNFYIKVSKRNPNNTMQGIFAIDSSDPIIHRIYYAKSGFVDLEKK 120 Query: 200 AIILNDGEVHRKSPISKDISIMKFKSYTLQT-ESANSSTIVLKANDQNLSFLLNPNPNNP 258 IIL GEVHRKS +SKDISIMKF SY L I LKA+DQNLSFLLNP+PNNP Sbjct: 121 IIILQKGEVHRKSSVSKDISIMKFDSYALDMQSLLAKQDITLKAHDQNLSFLLNPDPNNP 180 Query: 259 NYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGV 318 +YR + YRSE HKRLTQWLFP++FGLISI++ +K + +R +K+HP I+L +SF V Sbjct: 181 SYRENFIGKYRSELHKRLTQWLFPIVFGLISILSIEKTSSLRHYRKVHPSLIALLLSFCV 240 Query: 319 FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTKI 361 F GFSYII IEQ+P YIPILYLF F +SSI +L+IKKKY KI Sbjct: 241 FSGFSYIIQGIEQSPSYIPILYLFFFVLSSILVLLIKKKYVKI 283 >gi|270157966|ref|ZP_06186623.1| putativeYjgP/YjgQ family permease [Legionella longbeachae D-4968] gi|289163767|ref|YP_003453905.1| membrane protein [Legionella longbeachae NSW150] gi|269989991|gb|EEZ96245.1| putativeYjgP/YjgQ family permease [Legionella longbeachae D-4968] gi|288856940|emb|CBJ10754.1| putative membrane protein [Legionella longbeachae NSW150] Length = 356 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 49/357 (13%), Positives = 111/357 (31%), Gaps = 3/357 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI + + S + L ++ + I + +I+ + + +P Sbjct: 3 MKILDRYIAKTVIGSIGLVTLMLIGLQIFILFVDQISDLGRVDYGIVQATFFVMLQMPYQ 62 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + T L + ++EL+I+ +G S + VL ++LL IF+ + Sbjct: 63 VYLFFPMASLLGTLIGLGILANHSELVIMRASGMSIGQITVAVLKASVLLIIFVTVLGET 122 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P A + + R ++D + N Sbjct: 123 LVPYLSHYANDYKTAAISGGQTLRTSKGFWLRYNNDFISVGVVLSNNVLNNIYQFRFDNQ 182 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + + I D + + + + + + Sbjct: 183 HHLKMSRFIRE--VRHTPTGWIAYDVQQTEFGGDQTKAQAFASLPWDVSVKPKILTISSI 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 ++ NL L N + + Y+ F +RL Q ++ ++SI Sbjct: 241 DPDEMNLREL-NRYIRAQKLNHQNIHNYQFAFLQRLIQPFTTMVMMILSIPFIFGPLRST 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ SF + F + + Q P + L + LM + + Sbjct: 300 TMGSKLLVGAAVGFSFHILNRFFGPLSTVFQLPPELSALGPTVIFALLGLYLMKRVR 356 >gi|298529509|ref|ZP_07016912.1| permease YjgP/YjgQ family protein [Desulfonatronospira thiodismutans ASO3-1] gi|298510945|gb|EFI34848.1| permease YjgP/YjgQ family protein [Desulfonatronospira thiodismutans ASO3-1] Length = 355 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 42/358 (11%), Positives = 117/358 (32%), Gaps = 7/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+LR + + ++ + R+N + + +L+ + +P + Sbjct: 1 MSVLNRYLLRQNLFYTAVLLFSGTMVYLIVDFVGRMNAMVEAGLGALQVLEYFVFKMPLI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P F + + M+R+ EL+ ++++ S + A+++ + LF+ Sbjct: 61 VAQTLPAIFMLGVLIQMAMMHRSNELVAMESSAISFRKPAVFFIGYALVVFMLLFVFSET 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + +Q+ + + + D D I I + + N F + Sbjct: 121 LGVRGEQVTRQIWNQDVRDREAAVEGLEDVWVKDRDYMIHIERAHINEGRGKDFTAYKKS 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ ++ + ++L D V + + + + S L Sbjct: 181 DPGKIQEIIKAPEFEVHKNRLLLRDVTVFKPHSLERQSLQEMEMEVKIDLRSFALVDSDL 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 ++ L + N +E + H ++ V+ L+++ R Sbjct: 241 PYQAWSIFTL-SALVNQLKESGASVEKISTALHSKIAYPFALVVMTLLALAL-----FTR 294 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + + + L I F ++ + P + + + L +++ + Sbjct: 295 IKNIYALVTLGLVIVFF-YYTVYVFGVSYAEEGVTAPFVGAWTANVFFGILSLLQLFW 351 >gi|86138692|ref|ZP_01057265.1| permease, YjgP/YjgQ family protein [Roseobacter sp. MED193] gi|85824752|gb|EAQ44954.1| permease, YjgP/YjgQ family protein [Roseobacter sp. MED193] Length = 367 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 46/362 (12%), Positives = 117/362 (32%), Gaps = 13/362 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK +LY R + F + C ++ + +I + ++I S + ++ ++ P Sbjct: 1 MK-LDLYYARRFLQWFAVICGVLMTLVMLIDLNEQIRRFDEFDVSASEIVGLTLLNAPAA 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPV--------LFLAILLSI 112 L P + T + + R++EL++ G S I + + L+ Sbjct: 60 LSEFLPLIMILTTIVLFVGLARSSELVVTRAIGRSGIRALAAPVLVAGLLGILAVSTLNP 119 Query: 113 FLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQG 172 + + N+ + + + + +L + + N L Sbjct: 120 IVAATTNLSKTLADTYRTGGPSALSFSGEGLWLRQGSPSGQSVIHASSYGGGSDNIVLYD 179 Query: 173 IFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 + I+ + + ++ H + ++ + S ++ L T Sbjct: 180 VTILAYAPQGGPIRQIIAESARLDGEEWLLHKAKAWHMTAGLNPERSAATHETLRLPTTL 239 Query: 233 ANSSTIVLKANDQNLS-FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 + +S + L + + Y+ + L + LF + L+ Sbjct: 240 TQDRIRDRLGSADGISVYDLPTTIRDLAQAGFSTKRYQVWYQVELARPLFLIAMVLVGAA 299 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 R + ++ + FG+++ ++ + +N L + ++SI L Sbjct: 300 F--TMRHTRFGGTGLAVLTAVLLGFGLYFVRNFAQ-ILGENGQIPVALAAWAPPVASILL 356 Query: 352 LM 353 M Sbjct: 357 TM 358 >gi|319762859|ref|YP_004126796.1| permease yjgp/yjgq family protein [Alicycliphilus denitrificans BC] gi|317117420|gb|ADU99908.1| permease YjgP/YjgQ family protein [Alicycliphilus denitrificans BC] Length = 366 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 49/367 (13%), Positives = 122/367 (33%), Gaps = 12/367 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ I R + L + + + ++ + V S+ ++ L +P Sbjct: 1 MKTIRRLIYREVIVGVAFVTLAFLALFFFFDLVDELRWVGSNGYRMSHALLFVALSLPQH 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + T V+ + +++E I+ +G + +L L F + Sbjct: 61 LYELLPITVLIGTIFVMARLAQSSEFTIMRTSGLGPWRALSTLLTLGCAFVALTFAVGDY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEEN-LFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P + A+ ++ + D + + P+ ++ + + + Sbjct: 121 LAPISERAAALVRAQQLGQISTGATGAWLKERQGDHSFAVNVRALTPDGHMRDVRVFEFD 180 Query: 180 DTQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKS-PISKDISIMKFKSYTL----QTESA 233 A + D A L + + DI + + + TL + Sbjct: 181 ARGRVASTTVAAQATFDDSGDAWNLEQVKRSVFEQRPNGDIRVTRRQEPTLLLHTRISPD 240 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + +LK + L + + + + Y EF +++ L ++ ++S+ A Sbjct: 241 MVAASLLKPDKMATIGLFH-YIRHLEANGQSAQRYEIEFWRKVFYPLSCLVMVVLSLPFA 299 Query: 294 DKRALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYY---IPILYLFLFCISSI 349 + ISF + F + + +P+ P L L +++ Sbjct: 300 YLHFRSGGIAGYVFGGVMAGISFFLLNNVFGFAGNLQNWSPWLTAAAPGLIYSLLSLAAF 359 Query: 350 FLLMIKK 356 L++++ Sbjct: 360 GWLVLRR 366 >gi|326565140|gb|EGE15331.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis 103P14B1] gi|326572841|gb|EGE22826.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis CO72] gi|326573713|gb|EGE23671.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis O35E] Length = 437 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 49/368 (13%), Positives = 129/368 (35%), Gaps = 21/368 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + + F+V I ++++ + + ++ +L ++ GY P L Sbjct: 57 ILRRYMTTQVASTTALVLGFLVVILLGGRLIRYFGMAAEGGLNVGVLFRLIGYNFPYFLE 116 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + V + + E+ +++ +G SR + + ++ L ++L + + Sbjct: 117 LILPLSFFIGLMLVFGRLYTDHEMTVMNASGISRGRVARLLMPLVVVLMCIEGWVSMVAK 176 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISK-----------YNPNNTLQ 171 P + + +A F + F D +T + Sbjct: 177 PWGMERATNIWQEQSVAQVFDLIRPQEFISSGDYHLYVGEMGANREFLKDVIIIQMHTAE 236 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAII---LNDGEVHRKSPISKDISIMKFKSYTL 228 I + Q I +A+S + I L G + P S+ S + F+ Y + Sbjct: 237 PSDIQSRQSHQRDSIIFAKSATHVETGNGQIQLDLQQGRRYEVDPTSRQYSQIGFERYRM 296 Query: 229 QTE-SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGL 287 T ++ + + LL+ + + + + +E RL+ ++ Sbjct: 297 TLSVKPPEGTSHIRIEGVSTTELLS--IIQGHSKRDNPQEAYAELGYRLSMPWLILLAI- 353 Query: 288 ISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCIS 347 ++A + ++ + + + ++ I + I + P++YL + Sbjct: 354 --LLATPLSYVRPRQGRWYKLVPAILIYVAGVLVVISLKDTIAK-GKLSPVIYLAALLMM 410 Query: 348 SIFLLMIK 355 + + + Sbjct: 411 MVVAMYLN 418 >gi|254481219|ref|ZP_05094464.1| putative permease, YjgP/YjgQ family [marine gamma proteobacterium HTCC2148] gi|214038382|gb|EEB79044.1| putative permease, YjgP/YjgQ family [marine gamma proteobacterium HTCC2148] Length = 369 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 49/365 (13%), Positives = 116/365 (31%), Gaps = 24/365 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+ + + ++ I + ++ + + + IL+ + Y +P Sbjct: 1 MKIL-RYLALDVLVHMVAVSFVLLVIIISGRFVKYLAEAAVGDLAAGILVPVLLYRLPGF 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ P + + +E++I TG S L L A+L+ + + Sbjct: 60 MELIIPLGLFIGILMSYGRLYVESEMVIFTATGISPQRLAGYTLVPALLVMVIVGGLSLF 119 Query: 121 IEPKCRSTIKQ-LSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 I P + + L A + R +D+ + N + +F+ + Sbjct: 120 ISPLGAARSEALLHAPESSQGINALAAGRFQTRRSNDMVSYAQAVDANGVMHSVFLSQAE 179 Query: 180 DTQ----THKIYYAQSGSIDLDR----QAIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 T + A G + D + + L +G + P D ++ F+ + Sbjct: 180 REDDGELTMLLTIASEGEVKFDSATGARYLELRNGVRYVGYPGDLDYQVVSFEQFGELIP 239 Query: 232 SANSSTIVLKAND-QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 D + + LL+ L ++ H RL+ + I +I++ Sbjct: 240 EPEGGVRTADPVDGRTTAHLLS----------SELLEDKAALHWRLSIPVMVPIVAIIAM 289 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 +R + + + + G + I ++ ++ Sbjct: 290 C---MSHTNHRRGRYIKMAPAFILYLGYLTLLANARSGIASGEGGTVNIWAVHALFLAVA 346 Query: 351 LLMIK 355 L M+ Sbjct: 347 LAMLY 351 >gi|296104923|ref|YP_003615069.1| lipopolysaccharide export system permease protein LptG [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059382|gb|ADF64120.1| lipopolysaccharide export system permease protein LptG [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 360 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 110/337 (32%), Gaps = 2/337 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ + ++ + + +P + + Sbjct: 7 LDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQI 66 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 67 FFPMAALLGALLGLGMLAQRSELVVMQASGFTRLQVALSVMKTAIPLVLLTMAIGEWVAP 126 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+A + ++ L+ + + + + + + Sbjct: 127 QGEQMARNYRAQAMYGGSLLSTQQGLWAKDGQNFVYIERVKGDDELGGVSIYAFNDERRL 186 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + +A S D + + L+ + +P S ++ + L Sbjct: 187 QSVRHASSAKFDPEHKQWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVVALDP 246 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S L N + Y+ ++ Q + + L+++ Sbjct: 247 DALSISGLHN-YVKYLKSSGQDAGRYQLNMWSKIFQPMSVAVMMLMALSFIFGPLRSVPM 305 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL 339 IS F V + + P I L Sbjct: 306 GVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGAL 342 >gi|261416540|ref|YP_003250223.1| permease YjgP/YjgQ family protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372996|gb|ACX75741.1| permease YjgP/YjgQ family protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|302327353|gb|ADL26554.1| putative membrane protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 366 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 50/369 (13%), Positives = 114/369 (30%), Gaps = 19/369 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F Y++ + FL+ V I VI + I S + + +P +L Sbjct: 2 KFSRYLIWNFLKMFLIVVCGAVLIFVVIDFVGNIKTWLSR--DMKAVTDYYLSYLPYILY 59 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++TP + + +M R+ E+ + ++G S + P+ FL +L+SI + Sbjct: 60 LITPVALFIAVLASVGNMARHLEMSAMQSSGQSPFKTLLPIFFLGVLMSIGSYEMSEHWL 119 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENL---FFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 P ++ ++E F + + + N + + ++ Sbjct: 120 PDANHKRFEIMETNAQKRKNPRIKEKQDFTFIDSEKNSWFFKHYSGKNKLGRDVVLLVRE 179 Query: 180 DTQTHKIYYAQSGSIDLDRQ-----AIILNDGEVHRKSPISK---DISIMKFKSYTLQTE 231 + + Y +S +G K + T Sbjct: 180 RGRLVERYDVRSIRWIEKDSVTKDGFWRFENGFHRVFKKDGSVDVFPVRQKSMKGKVNTH 239 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 + ++ + S ++ + E + + + +I LI Sbjct: 240 PNDLINERQLPDEMD-SKMVKARIDVLRRSGEDTRAMETALQFKYSAHWMNLIVLLIG-- 296 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--FCISSI 349 AA R + L + F ++ I K+ +N P + F + + Sbjct: 297 AALCHRYSRSGGLSQKFGVGLLLVFS-YYILERIGLKMGENGALSPFWAAWNSHFIYAGL 355 Query: 350 FLLMIKKKY 358 +M+ + + Sbjct: 356 AFVMLYRSF 364 >gi|126739400|ref|ZP_01755093.1| permease, YjgP/YjgQ family protein [Roseobacter sp. SK209-2-6] gi|126719500|gb|EBA16209.1| permease, YjgP/YjgQ family protein [Roseobacter sp. SK209-2-6] Length = 367 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 50/360 (13%), Positives = 118/360 (32%), Gaps = 17/360 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK +LY R + FL+ ++ + +I + ++I + S +L ++ P Sbjct: 1 MK-LDLYYARRFAQWFLVITGVLMTLVVLIDLSEQIRRFDAFDLSAGQILGLTLLNAPAA 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + T + + R++EL++ G S I + + +A L+ + + N Sbjct: 60 MNEFLPLIMILTTIVLFVGLARSSELVVTRAIGRSGIRALAAPVLVAALIGVLAVSTLNP 119 Query: 121 IEPKCRSTIKQLSAKAQLALTF---------SYLEENLFFRLDDDLYIKISKYNPNNTLQ 171 I + K LS + + + + Sbjct: 120 IVAATTNRYKSLSDSYRTGGPSVLSLTGEGLWLRQGSPSGQSVVHAAGYGGGREEIILYD 179 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSP-ISKDISIMKFKSYTLQT 230 + +D+ A+S + + +L D +V S + +IS + + + T Sbjct: 180 VTILTYGKDSGPRTRTQARSARL--EGSDWVLQDAKVWPLSAWTNPEISAGEHQELRIPT 237 Query: 231 ESANSSTIVL-KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 A+D + L + + + L + F + L+ Sbjct: 238 TLTQDRIRDRLDASDGISIYDLPQTIRELAEAGFATKKHEVWYQVELARPFFLIAMVLVG 297 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 R + ++ + FG+++ ++ + +N L + ++SI Sbjct: 298 AAF--TMRHTRFGGTGMAVLTAVLLGFGLYFIRNFAQ-ILGENGEIPVALAAWAPPVASI 354 >gi|33151747|ref|NP_873100.1| hypothetical protein HD0553 [Haemophilus ducreyi 35000HP] gi|33147968|gb|AAP95489.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP] Length = 367 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 51/357 (14%), Positives = 121/357 (33%), Gaps = 19/357 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + I +S L ++ + + Q++ +N S +++L + G +P + Sbjct: 2 ILSRYLTKEILKSQLAILFILLLMFFSQQLISVLNSAVSGKIPTDLVLSLLGLGMPALSQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + L ++E+ ++ G + L K LFL++ + + + Sbjct: 62 FMLPLSLFIALLLTLGRFYADSEITVMRACGIGQGLLTKVALFLSLFTTALAVYNVFWLT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI--KISKYNPNNTLQGIFIVDSRD 180 P + Q+ A+A+ FS L F + + I+K +F D + Sbjct: 122 PWSINKQSQILAEAKSNPRFSALSVGQFMEVGGYVLFIENINKQENKLNDVYVFQPDQQK 181 Query: 181 TQTHKIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G ++ Q + L + + S D I F Y + T Sbjct: 182 KNRPSVVTAELGGLQALPNGDQILTLANSTRYEGSANVADFRISHFDRYQAYLGYQDIQT 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + N + L+N + ++E R + L+++ Sbjct: 242 NDKRVQRANFTSLIN----------DTSNEAKAELQWRFVLIFAVPLMALLAV---PMSQ 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-PYYIPILYLFLFCISSIFLLM 353 + ++ + + ++ + F S + E + + + ++M Sbjct: 289 VNPRQGRFAKVIPAVLLYLIYFLLQSSLRSSGENDKLNATLFMPAVSIGFLMLAIIM 345 >gi|330824939|ref|YP_004388242.1| permease YjgP/YjgQ family protein [Alicycliphilus denitrificans K601] gi|329310311|gb|AEB84726.1| permease YjgP/YjgQ family protein [Alicycliphilus denitrificans K601] Length = 366 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 49/367 (13%), Positives = 122/367 (33%), Gaps = 12/367 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ I R + L + + + ++ + V S+ ++ L +P Sbjct: 1 MKTIRRLIYREVIVGVAFVTLAFLALFFFFDLVDELRWVGSNGYRMSHALLFVALSLPQH 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + T V+ + +++E I+ +G + +L L F + Sbjct: 61 LYELLPITVLIGTIFVMARLAQSSEFTIMRTSGLGPWRALSTLLALGCAFVALTFAVGDY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEEN-LFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P + A+ ++ + D + + P+ ++ + + + Sbjct: 121 LAPISERAAALVRAQQLGQISTGATGAWLKERQGDHSFAVNVRALTPDGHMRDVRVFEFD 180 Query: 180 DTQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKS-PISKDISIMKFKSYTL----QTESA 233 A + D A L + + DI + + + TL + Sbjct: 181 ARGRVASTTVAAQATFDDSGDAWNLEQVKRSVFEQRPNGDIRVTRRQEPTLLLHTRISPD 240 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + +LK + L + + + + Y EF +++ L ++ ++S+ A Sbjct: 241 MVAASLLKPDKMATIGLFH-YIRHLEANGQSAQRYEIEFWRKVFYPLSCLVMVVLSLPFA 299 Query: 294 DKRALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYY---IPILYLFLFCISSI 349 + ISF + F + + +P+ P L L +++ Sbjct: 300 YLHFRSGGIAGYVFGGVMAGISFFLLNNVFGFAGNLQNWSPWLTAAAPGLIYSLLSLAAF 359 Query: 350 FLLMIKK 356 L++++ Sbjct: 360 GWLVLRR 366 >gi|329114151|ref|ZP_08242913.1| Lipopolysaccharide export system permease protein LptG [Acetobacter pomorum DM001] gi|326696227|gb|EGE47906.1| Lipopolysaccharide export system permease protein LptG [Acetobacter pomorum DM001] Length = 370 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 40/358 (11%), Positives = 100/358 (27%), Gaps = 13/358 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTVL 61 + YI R S + + I + + + V++ S N++ +I+ +P Sbjct: 6 TLSRYIARQFVFSVVAMIASLTGIVCLFDFIDLLRRVATKPDVSTNVVTEIAALHVPYFA 65 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF + + R++EL++ G S + + A+L+ + + Sbjct: 66 TEILPFGMLLGGIVCFWRLTRSSELIVARAAGISAWQFLTAPVACAMLIGALFTTLISPV 125 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--R 179 ++L + + L +G+ + D R Sbjct: 126 SSSMYRRAEELDQQYLRTGGGPLSLSSGSLWLRQSDSQYDPHGVAMLHARGVQLKDGLLR 185 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI------SKDISIMKFKSYTLQTESA 233 + + +A G + + + + Sbjct: 186 IRNVSVFRLDHQDKLMMRIEAPEGYLGTLKWILSDASVVRPNDLLHHVGQIDLPTDLTVN 245 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 ++ L + + +R F L + L++ A Sbjct: 246 RVQESFSSPETLSVWAL-PGFISLLDRSGFSSIRHRIHFQSLLALPMLAGTMALVA--AG 302 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 R+ I ++ F +F S + + + P+L + ++ + L Sbjct: 303 FSMRPSRRGGVARMIGSGVAAGFLLFTV-SKVAEQFGNSGALPPMLAAWAPTLAGLCL 359 >gi|46580072|ref|YP_010880.1| permease [Desulfovibrio vulgaris str. Hildenborough] gi|120602470|ref|YP_966870.1| permease YjgP/YjgQ family protein [Desulfovibrio vulgaris DP4] gi|46449488|gb|AAS96139.1| permease, putative [Desulfovibrio vulgaris str. Hildenborough] gi|120562699|gb|ABM28443.1| permease YjgP/YjgQ family protein [Desulfovibrio vulgaris DP4] gi|311233929|gb|ADP86783.1| permease YjgP/YjgQ family protein [Desulfovibrio vulgaris RCH1] Length = 380 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 47/359 (13%), Positives = 111/359 (30%), Gaps = 9/359 (2%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 + + + FL+ ++ + + + LQ L L + YL+P + +V P Sbjct: 1 MFKELVSIFLLCLGALLSLILIGRGLQLRELFLGLDLGLTDATLLFLYLVPFFMLLVVPV 60 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 + M+ + EL+ + G S ++ L +L + Sbjct: 61 ACMLSVFLTFLRMSTDRELVALKAGGVSIYQMMAAPLVFCVLCAGLSLSISLHWLSWGMG 120 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR-DTQTHKI 186 + + ++ +F + L + + +P IV+ R + Sbjct: 121 NFRATIMEIANTRARIVIQPGVFNQDIPGLTLFARQVDPATGNLRQVIVEDRSRPGSTLT 180 Query: 187 YYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSSTIVL 240 A G+ D L DG +++ + + S L + + Sbjct: 181 IVAPEGTTATDEVRGEILFHLRDGRIYKADGENVSVLGFSEYSVRLDLDKLFKGLELGEI 240 Query: 241 KANDQNLSFL--LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 K + + L L+ N + E HKR ++ G+ ++ A Sbjct: 241 KPKEMSWRQLAGLDLNRYEAEMGERYVRKVLVEVHKRWALPAACIVLGIFALPLACAFEG 300 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 +R++ + + + + + P LF ++ ++ L + + Sbjct: 301 LRRQLGVALALVMFLVYYSMLSLGLSTGEAGTVPPVVGLWAPNVLFLVAGLYGLRLTAR 359 >gi|323697853|ref|ZP_08109765.1| permease YjgP/YjgQ family protein [Desulfovibrio sp. ND132] gi|323457785|gb|EGB13650.1| permease YjgP/YjgQ family protein [Desulfovibrio desulfuricans ND132] Length = 375 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 47/356 (13%), Positives = 105/356 (29%), Gaps = 8/356 (2%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 Y++R + + + I R++ + +L IP ++ Sbjct: 5 LSRYLIRQNLYLMAICLAVGTSLYLLSDIFDRLDDFIRAGLGAQTILFYFIVKIPLIVSQ 64 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 + P F + L + R+ E+L + G S I+ + A++ S + + Sbjct: 65 LMPAVFLLAMVVQLGVLARSREMLALRAGGVSFAWFIRFFVIYALIWSCGQLVFSQFLGV 124 Query: 124 KC-RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + + + NL+FR + + I I + Sbjct: 125 FGEQEANRIWKEDVRKKQLDELTIHNLWFRDGPFIVQAKEAQPSKSRASDITIYEFTTDN 184 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 I + +D L D +F S ++ + + Sbjct: 185 QELIRILNAKKALIDDHGWGLLDVHELDTRTFITVDRPSQFLSVRQNLKAYAAVELKGDT 244 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 L L + +E + +H +L+ V+ L+++V Sbjct: 245 AQLPLIEL-SRAIARLQESGSNVEMLLTIWHGKLSYAFSMVVMALLALVLVTFSE----- 298 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 I ++L + F + +G + + PIL +L L ++ + Sbjct: 299 NVYANIGLALILIF-IQYGMHVVGATAGEKGVLPPILAAWLGNGIMAALASLRLAW 353 >gi|291284362|ref|YP_003501180.1| Permease YjgP/YjgQ family protein precursor [Escherichia coli O55:H7 str. CB9615] gi|290764235|gb|ADD58196.1| Permease YjgP/YjgQ family protein precursor [Escherichia coli O55:H7 str. CB9615] gi|320656363|gb|EFX24270.1| Permease YjgP/YjgQ family protein precursor [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661734|gb|EFX29142.1| Permease YjgP/YjgQ family protein precursor [Escherichia coli O55:H7 str. USDA 5905] gi|320666885|gb|EFX33861.1| Permease YjgP/YjgQ family protein precursor [Escherichia coli O157:H7 str. LSU-61] Length = 359 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 49/360 (13%), Positives = 125/360 (34%), Gaps = 3/360 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + IL+ + + + + ++ S + + + Sbjct: 181 DLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLETLDNLAWQSAFTSMDLEELSM 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + YR ++L Q + + L+++ Sbjct: 241 PGNTFSVRQL-NHYIHYLQETGQPSSEYRLALWEKLGQPILTLAMILLAVPFTFSAPRSP 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + + + + + + +++ P+ L L + L + Y + Sbjct: 300 --GMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPIAFVLVALSLVYWYDR 357 >gi|227327171|ref|ZP_03831195.1| putative permease [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 371 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 52/354 (14%), Positives = 130/354 (36%), Gaps = 15/354 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N+++ + G +P ++ Sbjct: 2 IIIRYLVRETFKSQLAILFILLLIFFCQKLVRILGAAVDGEIPTNLVISLLGLGVPEMVQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ G + L+K L LA+ +I I+ + Sbjct: 62 LILPLSLFLGVLMTFGRLYAESEITVMHACGLGKRVLLKAALVLAVFTAIVATINVMWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +++ A+A+ + L E F + + + +F+ R + Sbjct: 122 PWSSRHQEEVLAEAKANPGMATLVEGQFQSAQGGNAVLFVGNVKGSEFEHVFLAQLRPSG 181 Query: 183 T--HKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A G I + Q + L++G + + + +D I F +Y + + Sbjct: 182 NARPSVVVADRGHIKQNEDGAQVVTLDNGSRYEGTALLRDFRITDFTNYQAVIGHQSVTL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 ++ L + + ++ R+EFH RLT + +I ++ + + Sbjct: 242 NNSDVQQMDMQTLWHSDAHDA----------RAEFHWRLTLIISVLIMAMMVVPLSVVNP 291 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + + P + I F + K + +P L + ++ L Sbjct: 292 RQGRVLSMLPAMLLYLIFFLLQSSLRSNASKGKIDPMVWVWLTNLTYFGIAVML 345 >gi|212636934|ref|YP_002313459.1| permease YjgP/YjgQ [Shewanella piezotolerans WP3] gi|212558418|gb|ACJ30872.1| Permease YjgP/YjgQ [Shewanella piezotolerans WP3] Length = 352 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 51/357 (14%), Positives = 116/357 (32%), Gaps = 5/357 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +LYI + + S +S L + ++ +I+ + ++ LV T S+ +LIP Sbjct: 1 MRILDLYIAKVLISSSSLSLLILTGLSGIIKWVDQLRLVGRGTYSMMDAGIYVLFLIPRD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + + N+EL+++ ++G SR+ + + AI L I + + Sbjct: 61 IEMFFPMAVLLGALTGMGMLASNSELVVMQSSGLSRLQIALSAMKTAIPLMILVMLLSEY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P K++ + ++ + D + NN Sbjct: 121 VAPVAEVRAKEIQRTQISGGSLIESTRGVWAKDGDLFVNIGGVVDSNNLRDITLYEFDDT 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 T +A++ + L D ++ + + S + + Sbjct: 181 TNLTSTVHAETAKYM--GKFWQLYDVRRTSLKSEQVVLTNLDEDKWISSLTPEKLSVVSV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K ++ LL+ + + Y ++L Q + + L+++ R Sbjct: 239 KPESLSIEGLLD-YLDYLKNNKQASARYELALWRKLMQPVTIAVMMLVALSFVFGPL--R 295 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + + F + I I S L +K Sbjct: 296 TVTMGARVLLGVVAGFSFYICSEVFGPLSIVYGLPAFISAGMPALIFSAGALYYIRK 352 >gi|316933707|ref|YP_004108689.1| permease YjgP/YjgQ family protein [Rhodopseudomonas palustris DX-1] gi|315601421|gb|ADU43956.1| permease YjgP/YjgQ family protein [Rhodopseudomonas palustris DX-1] Length = 361 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 43/356 (12%), Positives = 99/356 (27%), Gaps = 10/356 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y R + L + + + + + S + + S +P +L Sbjct: 4 NTLGRYFARRFVVASLGVFFGLFVLLVFVDYVDLLRRAGGLAVSAFYVAQASFCRVPQLL 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PFC + +++R+ EL++ G S I P L+ AI + I N + Sbjct: 64 ERLLPFCILIGGMTCYLALSRSLELVVARAAGLSAWEFISPALWSAIAIGIVATTIFNPL 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFR----LDDDLYIKISKYNPNNTLQGIFIVD 177 + KQ+ A+ T + N F+ D I ++ + + Sbjct: 124 SAHMQERAKQMEAEMFGENTGGLQDANGFWMNQVNPDGQAIINAARSQQQGAVLTGITIF 183 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 D ++ L+ +L + + A Sbjct: 184 RFDPNFQFRDRIEAREAVLEPGHWLLKSVRRYTLDSA---PTDQDTMELPTSLTLAQVRN 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L + YR ++HK L + +++ + Sbjct: 241 SFATPESVSFWQL-PAYIKSSENSGFATAGYRLQYHKLLAKPFLLAAMVMLAASVSL--R 297 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 R + ++ F ++ + + C+ + + Sbjct: 298 FFRFGGVQKMVLSGVAAGFLLYILSKVTEDLSKAELMHPLAAAWLPVCVGGLAGFL 353 >gi|307139669|ref|ZP_07499025.1| hypothetical protein EcolH7_16278 [Escherichia coli H736] Length = 359 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 48/360 (13%), Positives = 124/360 (34%), Gaps = 3/360 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I + G S + L IL ++ L + Sbjct: 61 LVELSPFVALLGGIVGLGQLSKNSELTAIRSMGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + IL+ + + + + ++ S + + + Sbjct: 181 DLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLETLDNLAWQSAFTSMDLEELSM 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + YR ++L Q + + L+++ Sbjct: 241 PGNTFSVRQL-NHYIHYLQETGQPSSEYRLALWEKLGQPILTLAMILLAVPFTFSAPRSP 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + + + + + + +++ P+ L L + L + Y + Sbjct: 300 --GMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPIAFVLVALSLVYWYDR 357 >gi|86147549|ref|ZP_01065859.1| hypothetical protein MED222_22708 [Vibrio sp. MED222] gi|85834588|gb|EAQ52736.1| hypothetical protein MED222_22708 [Vibrio sp. MED222] Length = 323 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 47/325 (14%), Positives = 113/325 (34%), Gaps = 4/325 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +LYI R I + + + V ++ +I+ ++++ V T L L IP + Sbjct: 3 KILDLYIGRTIIATTSLVLVTFVGLSGIIKYVEQLRKVGRGTYDLLQALYFVLLSIPRDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L + ++EL+++ G S++ + VL AI L + + + Sbjct: 63 EMFFPMAALLGALIGLGMLAASSELVVMQAAGFSKLDIGLSVLKTAIPLMVIVTLLGQWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + + +A ++ + D + +I I K + + + Sbjct: 123 APQAQ-KMARDLRTISVAGGSIISTQSGVWARDANDFIFIVKIDDDKLYGLNMWRYDENK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 Y++ D + + ++ I + S+ + + +K Sbjct: 182 ALKTAIYSKEVDYVGDNVWTMRDVEVTSFENEIQVTKESLPTFSWETSLAPDKLAIVTVK 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + +LS L + + + Y +++TQ + + L+++ R Sbjct: 242 PEELSLSGLYD-YVSYLKASEQDAARYELALWRKITQPISIAVMMLMALSFIFGPL--RS 298 Query: 302 RKKIHPIFISLSISFGVFWGFSYII 326 I + F + + Sbjct: 299 VTMGARILSGVIAGFTFYISSEFFG 323 >gi|126667524|ref|ZP_01738494.1| predicted Permease [Marinobacter sp. ELB17] gi|126627950|gb|EAZ98577.1| predicted Permease [Marinobacter sp. ELB17] Length = 353 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 43/356 (12%), Positives = 115/356 (32%), Gaps = 5/356 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+++ +G + + + ++ + + + ++ +++ ++L L +P Sbjct: 1 MHKIDRYVMKTVGGAMFLVMVVVLSLDLIFAFIAELDGTANNYQTL-DALWYVFLTLPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P M L SM ++EL +I G S ++ + A+ + + Sbjct: 60 IYDYLPLGAFMGCLVGLGSMASSSELTVIRAAGVSIKRIVWSAMKPALFVVLLGVGIGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + A A A + L+ R + + + Sbjct: 120 LAPPAERIAQSEKAVALGAGSNVAAASGLWHREGNVFIHMNAVQPSGVLFGISMFRFNEQ 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 Q +A+ D IL + + + + + S +++ Sbjct: 180 RQLLAASFAERAIYQGD--HWILENVQTTELAEQGTTRVTHNQLRWESGLSPSVLSVLIV 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K + ++ LL + + Y F K+ L + L++I Sbjct: 238 KPENLAMTGLL-TYARYLDEQGLSASRYWLAFWKKTLMPLGTAVMVLVAISFIFGPLRSV 296 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + +SF + + + +L + + + I +L++++ Sbjct: 297 TMGFRVFTGLLVGLSFKYMQDLLGPMSVVYGFEPILAVL-VPIAVNAGIGILLMRR 351 >gi|77457218|ref|YP_346723.1| permease YjgP/YjgQ [Pseudomonas fluorescens Pf0-1] gi|77381221|gb|ABA72734.1| putative ABC transport system, membrane protein [Pseudomonas fluorescens Pf0-1] Length = 353 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 48/357 (13%), Positives = 114/357 (31%), Gaps = 6/357 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + + I+ +A + + + V S T +L +L P Sbjct: 1 MVKLDRYIGSSVFIAIIAVLAIILGLATLFAFIDEMGDV-SDTYTLVDVLSFVLLTAPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L S+ ++EL ++ G S ++ V+ ++L + + Sbjct: 60 LYDMLPMAALIGCLIGLGSLASSSELTVMRAAGVSIGRIVWAVMKPMLVLMLAGVLIGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P S + + AQ + + ++ R D+ S ++ Sbjct: 120 VAPATESMAQANRSLAQGSGDAQSAKHGMWHRQGDEFIHINSVQPNGRLYGVTRYHFDKE 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 +A+ D D L D + S ++ + + + ST+V+ Sbjct: 180 RHLLSSSFAKRAEFDTD--HWQLTDVTTTKFHERSTEVVNTPVERWDVSLSPQLLSTVVM 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 +++ L + + Y F ++ Q L L++I R Sbjct: 238 APESLSITGL-WGYIHYLADQGLSNGRYWLAFWVKVLQPLVTAALVLMAISFIFGPL--R 294 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 +F + + F + + L + ++ + + ++ Sbjct: 295 SVTLGQRVFTGVLVGFTFRIVQDLLGPSSLVFGFSPLFAVLVPAGVCALAGVWLLRR 351 >gi|255020899|ref|ZP_05292955.1| Predicted permease [Acidithiobacillus caldus ATCC 51756] gi|254969690|gb|EET27196.1| Predicted permease [Acidithiobacillus caldus ATCC 51756] Length = 372 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 62/364 (17%), Positives = 132/364 (36%), Gaps = 8/364 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M ILR + R F+ CL ++ I + Q+ Q ++ V+S L + L++ G PT+ Sbjct: 1 MSRIHARILRDLLRVFVFGCLLVLGILAIGQLSQLLSQVASGQLPLGVTLQLLGLATPTL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V P F V +++ R+ E++ I + G S + L++ + +++++ + Sbjct: 61 LVTVLPLAFFFALYLVFSNLYRSNEMMAIRSAGLSLLDLLRALALPILVIALLEALLSLS 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + ++ S + A + ++ F R+ + + + P + + I Sbjct: 121 WSPAAQRQLQAESLRLANAAAEALIQPGSFARIAGGHILYVGQSAPGSEHRYREIFVDLG 180 Query: 181 TQTHKIY-YAQSGSIDLDRQAII---LNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + A G I D+ I L G + P + I+ F Y + + S Sbjct: 181 GKGEPDIATAAFGEIRKDQDGGIALVLIQGHRYLGQPGTAGFKILSFVHYRIALAAPQGS 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + + L P P +E RL L + L++I A Sbjct: 241 SDQG----IHWAALDLPQVLQALREPRYARHALAELEWRLIWPLLIPVLALLAIPLAFGG 296 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R + I ++ F + + + ++ L + ++ Sbjct: 297 PRGAGRASGALLGILTLLAANNLLVFLKEGIIQGRIGGFPGLFWVLLLLGALAAYAFWRR 356 Query: 357 KYTK 360 + + Sbjct: 357 QGDR 360 >gi|310766280|gb|ADP11230.1| Inner membrane protein [Erwinia sp. Ejp617] Length = 358 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 42/355 (11%), Positives = 117/355 (32%), Gaps = 2/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + + + +V ++ +I+ + ++ ++ + +P + + Sbjct: 5 LDRYIGKTIFNTIMATLFMLVSLSGIIKFVDQLRKTGQGEYTVLGAGLYTLLSVPKDIEI 64 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L ++ + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 65 FFPMAALLGALLGLGALAQRSELVVMQASGFTRMQIAASVMKTAIPLVLLTMAIGEFVAP 124 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+ + + + L+ + D+ + N + + Sbjct: 125 QGEQMARNYRAQQLMGGSLLSTQSGLWAKDGDNFIFIERIRDDNQLSGISIYNFDHERRL 184 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-DISIMKFKSYTLQTESANSSTIVLKA 242 + YA S + D++ L + S + S + + L Sbjct: 185 KTVRYAASAKYNADKKLWELAQVDQSDLSDAQQIKGSQTLSGEWNTTLTPDKLGVVALDP 244 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 ++S L + ++ Y+ ++ Q L + L+++ Sbjct: 245 GALSISGLYS-YSKYLKQSGQMAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVSM 303 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P + L + +++K++ Sbjct: 304 GMRVVTGISFGFLFYVLDQIFGPLSLVYNIPPILGALLPSAAFFAISLAMLVKRR 358 >gi|237807324|ref|YP_002891764.1| permease YjgP/YjgQ family protein [Tolumonas auensis DSM 9187] gi|237499585|gb|ACQ92178.1| permease YjgP/YjgQ family protein [Tolumonas auensis DSM 9187] Length = 356 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 37/355 (10%), Positives = 113/355 (31%), Gaps = 3/355 (0%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y+ R + + LM + +V ++ +I+ + ++ V + + + Y IP Sbjct: 4 ILDRYVGRTVIMAILMCTVMLVGLSSLIKFVDQLQNVGEGSFTTFHAILRVLYAIPGDTV 63 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + L + ++EL+++ G SR ++ L I + + + + Sbjct: 64 LFFPMAALLGGVIGLGQLASSSELVVLQAAGLSRAKIVISALKTVIPVMFLIMLLGEYVA 123 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + A + ++ + D I + +L+G+ + Sbjct: 124 PIAEQKAHDIKTSAISGGKITASTYGIWVKEGHDFIS-IDTLFRDGSLRGVTLYRFNLNG 182 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + + ++ + + + + + + + + Sbjct: 183 ELQEVIRSAMAVYQQQAWHLKDIVITQLQDKQQIKFKNLTDWVWKTNLTPDKLGVVSVSP 242 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 ++ + L N + + ++ Y EF ++L + + L++ Sbjct: 243 DELSAQGLYN-YISYMKSNGQQVDDYELEFWRKLLAPVSVIAMLLLAASTIFGPLRSVSM 301 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + +F V + P I + + + M++++ Sbjct: 302 GARLISGVMMGFAFFVANQVLGPFSLVYNVPPVIGA-SVPSLIFMGVAIYMLQRR 355 >gi|281180020|dbj|BAI56350.1| conserved hypothetical protein [Escherichia coli SE15] gi|330909040|gb|EGH37554.1| permease Ygh-P2, YjgP/YjgQ family [Escherichia coli AA86] Length = 359 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 50/360 (13%), Positives = 123/360 (34%), Gaps = 3/360 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 GASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + IL+ + + + ++ S N + + Sbjct: 181 DLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLETSDNLAWQSTFTSMNLEELSM 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + YR ++L Q + + L+++ Sbjct: 241 PGNTFSVRQL-NHYIHYLQETGQPSSEYRLALWEKLGQPILTLAMILLAVPFTFSAPRSP 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + + + + + + +++ P+ L L + L + Y + Sbjct: 300 --GMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYWYDR 357 >gi|121591646|ref|ZP_01678888.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|121546494|gb|EAX56709.1| conserved hypothetical protein [Vibrio cholerae 2740-80] Length = 338 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 42/339 (12%), Positives = 115/339 (33%), Gaps = 2/339 (0%) Query: 18 MSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVL 77 M + V ++ +I+ ++++ V + L L IP + M P + L Sbjct: 1 MVLVTFVGLSGIIKYVEQLRKVGEGSYDLLQALLFVVLSIPRDVEMFFPMAALLGALIGL 60 Query: 78 TSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQ 137 ++ ++EL+++ G S++ + VL AI L I + + P+ + + + Sbjct: 61 GALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIIVTLLGEWGAPQAQ-KMARDMRAFA 119 Query: 138 LALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLD 197 + + D + +I I+K + + + + +++ + Sbjct: 120 TSGGAIMSVRTGVWARDANDFIFIAKVENEHLYGLNLWRFDENKKLSTVIFSEQVDYVAN 179 Query: 198 RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNN 257 + ++ + + I + + + + +K + +L+ L + + Sbjct: 180 NEWLMKDAVLTRLVNDIEISKESLPEYRWRTSLAPDKLAVVTVKPEELSLTGL-SDYVHY 238 Query: 258 PNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFG 317 + Y +++TQ + + L+++ + SF Sbjct: 239 LKASEQDSSRYELALWRKVTQPISIAVMMLMALSFIFGPLRSVTMGARILSGVIAGFSFY 298 Query: 318 VFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + F + + P L L ++ L+ +K Sbjct: 299 ISSEFFGPLSLVYGLPPLFGALAPSLVFLAIALGLLGRK 337 >gi|229496640|ref|ZP_04390354.1| permease, YjgP/YjgQ family [Porphyromonas endodontalis ATCC 35406] gi|229316537|gb|EEN82456.1| permease, YjgP/YjgQ family [Porphyromonas endodontalis ATCC 35406] Length = 358 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 58/359 (16%), Positives = 121/359 (33%), Gaps = 5/359 (1%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPTVL 61 + YI+R ++ S L I+ +A V I +RI+ + SL I+ +P Sbjct: 4 RLDRYIIRLFLGTYFSSILLILSVAIVFDINERISKFLNPECSLYEIVFHYYLNFVPYYA 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M +P + + + TE++ I +G S L++P LF A ++++ F+ + + Sbjct: 64 NMFSPLFVFLSVIFFTSKLAEKTEIIAILASGVSFKRLLRPYLFSAAIVALLTFLLSSFV 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P S ++ E++ ++ L+ I Y+ +N F++D + Sbjct: 124 IPPG-SRVRNDFQNKYFRDKRQTYAESVQIQVSPSLFAYIHSYSADNKTGYNFMLDKFEH 182 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 T K + L D + R + T+ + + + Sbjct: 183 NTIKSRLTAQTAEYDTLNTWRLYDYSITRYGAKRDTLERGTQLDTTINLKPQDFLISAVD 242 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 A L + ++ E KR I +I + + R+ Sbjct: 243 AETYTTPVLHQYIGELKSRGATNVDLLEVELQKRYAAIPAAFILTIIGVSL---SSRKRK 299 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + I +++SF + + I +I + + KK + Sbjct: 300 GGTGLSLAIGIALSFTYILFLTLASSFSASGALSPIVAAQMPNAIYAIIAIFLYKKAPR 358 >gi|330827962|ref|YP_004390914.1| putative permease [Aeromonas veronii B565] gi|328803098|gb|AEB48297.1| Predicted permease [Aeromonas veronii B565] Length = 362 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 49/352 (13%), Positives = 114/352 (32%), Gaps = 20/352 (5%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 + R ++ L ++ I Q ++ I + ++ + +P + ++ P Sbjct: 1 MFRETLKTQLAVLFVLLLIFVSQQFIKIIGDAADGEVPTRLVSTLLLLNLPNMALLMLPI 60 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 + + +E+ ++ G S +++ + LA+L ++ + I P+ + Sbjct: 61 SLFLAILFAHGRLYAESEMTVMHAVGFSHRFVMRSAMLLALLTAVVAAFNTGWIAPQAKE 120 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD---TQTH 184 Q+ + + S+L+ F LD + + +N + I + Sbjct: 121 REYQVIDEFKADPGISFLQAGRFMDLDKGRLVAYIQDLNDNGSKLQKIFVLQRAEGNNPP 180 Query: 185 KIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + A G + +D Q + L DG + + K I F+ Y L K Sbjct: 181 SVVVATEGVVTVDENGLQWLTLMDGSRYEGNFSGKQFQISDFREYGLVIRQQEMERSNRK 240 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 A + L +E R++ L + L+ + + Sbjct: 241 AAAKPTMELF----------GTQDNAMMAELQWRISLPLSIPVLTLL---VVPLARVNPR 287 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQN-PYYIPILYLFLFCISSIFLL 352 + + + ++ + F S I+ Y P ++L L Sbjct: 288 QGRYAKLLPAIMLYLSYFLLLSAARSAIDSGRLPYWPGMFLVPLGYLLFIGL 339 >gi|323188591|gb|EFZ73876.1| hypothetical protein ECRN5871_3010 [Escherichia coli RN587/1] Length = 359 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 50/360 (13%), Positives = 124/360 (34%), Gaps = 3/360 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLEQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + IL+ + + + ++ S N + + Sbjct: 181 DLSLESYIYARSATIKDDKTWILHGVNHKKWLNGKETLETSDNLAWQSTFTSMNLEELSM 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + YR ++L Q + + L+++ Sbjct: 241 PGNTFSVRQL-NHYIHYLQETGQPSSEYRLALWEKLGQPILTLAMILLAVPFTFSAPRSP 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + + + + + + +++ P+ L L + L + Y + Sbjct: 300 --GMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYWYDR 357 >gi|300993118|ref|ZP_07180204.1| hypothetical protein HMPREF9553_04258 [Escherichia coli MS 200-1] gi|300305133|gb|EFJ59653.1| hypothetical protein HMPREF9553_04258 [Escherichia coli MS 200-1] Length = 359 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 49/354 (13%), Positives = 121/354 (34%), Gaps = 3/354 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 GASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + IL+ + + + ++ S N + + Sbjct: 181 DLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLETSDNLAWQSTFTSMNLEELSM 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + YR ++L Q + + L+++ Sbjct: 241 PGNTFSVRQL-NHYIHYLQETGQPSSEYRLALWEKLGQPILTLAMILLAVPFTFSAPRSP 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + + + + + + +++ P+ L L + L + Sbjct: 300 --GMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSL 351 >gi|260845739|ref|YP_003223517.1| hypothetical protein ECO103_3663 [Escherichia coli O103:H2 str. 12009] gi|257760886|dbj|BAI32383.1| conserved predicted membrane protein [Escherichia coli O103:H2 str. 12009] Length = 359 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 49/360 (13%), Positives = 124/360 (34%), Gaps = 3/360 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + IL+ + + + ++ S + + + Sbjct: 181 DLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLETSDNLAWQSAFTSMDLDELSM 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + YR ++L Q + + L+++ Sbjct: 241 PGNTFSVRQL-NHYIHYLQETGQPSSEYRLALWEKLGQPILTLAMILLAVPFTFSAPRSP 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + + + + + + +++ P+ L L + L + Y + Sbjct: 300 --GMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYWYDR 357 >gi|16273591|ref|NP_439846.1| hypothetical protein HI1704 [Haemophilus influenzae Rd KW20] gi|1176472|sp|P45333|LPTF_HAEIN RecName: Full=Lipopolysaccharide export system permease protein lptF gi|1574558|gb|AAC23350.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20] Length = 372 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 49/354 (13%), Positives = 129/354 (36%), Gaps = 15/354 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + +S + L ++ I + Q ++ + ++ +++ + G +PT+ Sbjct: 2 ILIRYLIKEVFKSQIAILLILLLIFFSQQFVRVLGAAANGNVPADLVFSLLGLGMPTMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P C + + +E+ ++ G + L+K L +++L + + + Sbjct: 62 LMLPLCLFIAILLTFGRLYAESEITVMRACGVGQRILVKVALIMSLLTAGIAAYNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + A+ T L F +++ + +N ++ +++ + Sbjct: 122 PWAIQKQVNMVEDAKANPTVGVLSSGQFISTNNNNVVLFIDKIKDNQIRNVYLFQMTPQK 181 Query: 183 --THKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G + Q + L + + + D I F Y ++ Sbjct: 182 QTKPSVITAEKGELIALPNGDQVLNLKNTKRVEGTSALPDFRITHFDEYHAYLGYQSAEN 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + LS L++ + ++ ++E H R+T L + LI++ + Sbjct: 242 TNDEVAELTLSQLIDLDSSSA----------KAELHWRITLILAVPLMALIAVPLSRVNP 291 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + KI P + I F + F + + L F + ++ L Sbjct: 292 RQGRFAKILPALLLYLIYFLLQSSFKSAGSAGKLEAELLMPLVNIGFFLLAVVL 345 >gi|290473525|ref|YP_003466395.1| putative transmembrane protein, transport [Xenorhabdus bovienii SS-2004] gi|289172828|emb|CBJ79599.1| putative transmembrane protein, transport [Xenorhabdus bovienii SS-2004] Length = 358 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 46/354 (12%), Positives = 112/354 (31%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI R I ++ LM+ +V ++ +I+ + ++ V S + +P + + Sbjct: 5 LDRYIGRTILQTILMTLFTLVSLSGIIKFVDQLRKVGQGEYSAFAAGIYTLLSVPKDIQI 64 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L ++ +EL+++ +G +R+ + V+ AI L + + P Sbjct: 65 FFPMAALLGGLLGLGALATRSELVVMQASGFTRLQVAGSVMKTAIPLVFLTMVIGEWVAP 124 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + ++ + + ++ + +D S N + + Sbjct: 125 QGEQIARNYRSQKMFGGSLMSTAKGMWAKDGNDFVYIKSVDKDNALRDVSIYHFDDNKKL 184 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 + YA + D + + L+ E I + + + + +V Sbjct: 185 LSVKYAATAVYDQNNRQWKLSQVEESDLRQIGRITGSQRISAEWKSLLTPEKLGVVALDP 244 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 D L + Y+ K++ L + L+++ Sbjct: 245 DALSIRGLQQYITYLKQGQQDAGRYQLNMWKKVFAPLSVAVMMLMALSFIFGPLRSVAMG 304 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P + L L ++ +K Sbjct: 305 VRVIAGISTGFIFYVLNEIFGPLSLVYSMPPLLGALLPSLLFFVVSVYFLLHRK 358 >gi|157155522|ref|YP_001464443.1| YjgP/YjgQ permease [Escherichia coli E24377A] gi|193067447|ref|ZP_03048415.1| putative permease, YjgP/YjgQ family [Escherichia coli E110019] gi|260869741|ref|YP_003236143.1| hypothetical protein ECO111_3808 [Escherichia coli O111:H- str. 11128] gi|157077552|gb|ABV17260.1| putative permease, YjgP/YjgQ family [Escherichia coli E24377A] gi|192959404|gb|EDV89839.1| putative permease, YjgP/YjgQ family [Escherichia coli E110019] gi|257766097|dbj|BAI37592.1| conserved predicted membrane protein [Escherichia coli O111:H- str. 11128] gi|323178688|gb|EFZ64264.1| hypothetical protein ECOK1180_2420 [Escherichia coli 1180] Length = 359 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 49/360 (13%), Positives = 125/360 (34%), Gaps = 3/360 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + +L+ + + + + ++ S N + + Sbjct: 181 DLSLESYIYARSATIKDDKTWVLHGVNHKKWLNGKETLETLDNLAWQSAFTSMNLEELSM 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + YR ++L Q + + L+++ Sbjct: 241 PGNTFSVRQL-NHYIHYLQETGQPSSEYRLALWEKLGQPILTLAMILLAVPFTFTAPRSP 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + + + + + + +++ P+ L L + L + Y + Sbjct: 300 --GMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYWYDR 357 >gi|294782104|ref|ZP_06747430.1| permease, YjgP/YjgQ family [Fusobacterium sp. 1_1_41FAA] gi|294480745|gb|EFG28520.1| permease, YjgP/YjgQ family [Fusobacterium sp. 1_1_41FAA] Length = 359 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 57/352 (16%), Positives = 116/352 (32%), Gaps = 1/352 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YIL + +++ FI + ++ + + S+ +L++ + IP + Sbjct: 1 MKIINKYILDELKGPIILAVFVFTFIFLLDIVVTMMEHIIVKGISVFDVLRLLSFYIPPI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + T +RN+E + + +TG S ++KP+L +AI +IF+ + Sbjct: 61 LTQTIPIGMFLGIMICFTKFSRNSESVAMVSTGMSIRAILKPILAIAIGSAIFILFLQES 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P+ +K + K L+E F D I + K + + I + + Sbjct: 121 IIPRSFVKLKYVGTKIAYENPVFQLKEKTFIDNLDQYSIYVDKVESDGKAKNIIAFEKPE 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 +T +IIL + K F + + L Sbjct: 181 DKTKFPMVLTGEEAFWKDNSIILKQSQFISFDETGKKNLTGTFDEKRVVLTPY-FENLNL 239 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K D + + N E + Y+ E ++L + +I + + Sbjct: 240 KIKDVEALSITDLVKNIRKVEAEEVLKYKIEIFRKLALIFSTIPLAVIGFCLSLGHHRIS 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 ++ I + + + +P+ L L Sbjct: 300 KKYSFVLAMIIIFAYIIFLNIGIVMASAGKLHPFIATWTPNVLLYFLGYKLY 351 >gi|114766152|ref|ZP_01445156.1| permease, YjgP/YjgQ family protein [Pelagibaca bermudensis HTCC2601] gi|114541612|gb|EAU44654.1| permease, YjgP/YjgQ family protein [Roseovarius sp. HTCC2601] Length = 364 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 49/353 (13%), Positives = 118/353 (33%), Gaps = 13/353 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y R FL ++ ++ ++ S S ++ ++ +P+ L Sbjct: 2 ILHRYFARRFLTMFLSILTVFALFLALLDLVDQLRRFGSD-VSFGQVVYLTLLNLPSGLY 60 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + T + M R++EL+++ G S +T + + +A+++S N I Sbjct: 61 EILPLVMILATAALFLMMARSSELVVVRAAGRSGLTALAGPVAVALVISGVSVAILNPIV 120 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFR-----LDDDLYIKISKYNPNNTLQGIFIVD 177 L+ + + + D I+ ++ NP+ T+ Sbjct: 121 AATSRQSSDLTESYKSNGASTISIGREGLWLRQGGDEGDTVIRAARANPDATVLYEVSFV 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI-SKDISIMKFKSYTL--QTESAN 234 + ++ + ++ L A +L D + S + +F+ L Sbjct: 181 EYEAESGPLRRIEAEEAALQDGAWVLRDAKAWPLQSGRSPEGMSERFERLELPSDLTQDG 240 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 K + + L + L + +F V L++ A Sbjct: 241 IRDRFGKPSSVAIWDL-PEFIEGLEMAGFSARRHVVWLQMELARPVFLVAMVLVA--AGF 297 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCIS 347 R + + ++ + FG+++ ++ + +N PIL ++ I+ Sbjct: 298 TMRPARLGRTGLHVLAAVLLGFGLYYVRNFAQ-IMGENGQLPPILAAWIPPIA 349 >gi|260857119|ref|YP_003231010.1| putative inner membrane protein [Escherichia coli O26:H11 str. 11368] gi|257755768|dbj|BAI27270.1| predicted inner membrane protein [Escherichia coli O26:H11 str. 11368] Length = 359 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 50/360 (13%), Positives = 126/360 (35%), Gaps = 3/360 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + VL IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVVLVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + +L+ + + + + ++ S N + + Sbjct: 181 DLSLESYIYARSATIKDDKTWVLHGVNHKKWLNGKETLETLDNLAWQSAFTSMNLEELSM 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + YR ++L Q + + L+++ Sbjct: 241 PGNTFSVRQL-NHYIHYLQETGQPSSEYRLALWEKLGQPILTLAMILLAVPFTFTAPRSP 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + + + + + + +++ P+ L L + L + Y + Sbjct: 300 --GMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYWYDR 357 >gi|326574663|gb|EGE24599.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis 101P30B1] Length = 437 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 49/368 (13%), Positives = 129/368 (35%), Gaps = 21/368 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + + F+V I ++++ + + ++ +L ++ GY P L Sbjct: 57 ILRRYMTTQVASTTALVLGFLVVILLGGRLIRYFGMAAEGGLNVGVLFRLIGYNFPYFLE 116 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + V + + E+ +++ +G SR + + ++ L ++L + + Sbjct: 117 LILPLSFFIGLMLVFGRLYTDHEMTVMNASGISRGRVARLLMPLVVVLMCIEGWVSMVAK 176 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISK-----------YNPNNTLQ 171 P + + +A F + F D +T + Sbjct: 177 PWGMERATNIWQEQSVAQVFDLIRPQEFISSGDYHLYVGEMGANREFLKDVIIIQMHTAE 236 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAII---LNDGEVHRKSPISKDISIMKFKSYTL 228 I + Q I +A+S + I L G + P S+ S + F+ Y + Sbjct: 237 PSDIQSRQSHQRDSIIFAKSATHVETGNGQIQLDLQQGRRYEVDPTSRQYSQIGFERYRM 296 Query: 229 QTE-SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGL 287 T ++ + + LL+ + + + + +E RL+ ++ Sbjct: 297 TLSVKPPEGTSHIRIEGVSTTELLS--IIQGHSKRDNPQEAYAELGYRLSMPWLILLAI- 353 Query: 288 ISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCIS 347 ++A + ++ + + + ++ I + I + P++YL + Sbjct: 354 --LLATPLSYVRPRQGRWYKLVPAILIYVAGVLVVISLKDTIAK-GKLSPVIYLAALLMM 410 Query: 348 SIFLLMIK 355 + + + Sbjct: 411 MVVAMYLN 418 >gi|326561253|gb|EGE11612.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis 46P47B1] Length = 437 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 50/368 (13%), Positives = 130/368 (35%), Gaps = 21/368 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + + F+V I ++++ + + ++ +L ++ GY P L Sbjct: 57 ILRRYMTTQVASTTALVLGFLVVILLGGRLIRYFGMAAEGGLNVGVLFRLIGYNFPYFLE 116 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + V + + E+ +++ +G SR + + ++ L ++L + + Sbjct: 117 LILPLSFFIGLMLVFGRLYTDHEMTVMNASGISRGRVARLLMPLVVVLMCIEGWVSMVAK 176 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISK-----------YNPNNTLQ 171 P + + +A F + F DD +T + Sbjct: 177 PWGMERATNIWQEQSVAQVFDLIRPQEFISSDDYHLYVGEMGANREFLKDVIIIQMHTAE 236 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAII---LNDGEVHRKSPISKDISIMKFKSYTL 228 I + Q I +A+S + I L G + P S+ S + F+ Y + Sbjct: 237 PSDIQSRQSHQRDSIIFAKSATHVETGNGQIQLDLQQGRRYEVDPTSRQYSQIGFERYRM 296 Query: 229 QTE-SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGL 287 T ++ + + LL+ + + + + +E RL+ ++ Sbjct: 297 TLSVKPPEGTSHIRIEGVSTTELLS--IIQGHSKRDNPQEAYAELGYRLSMPWLILLAI- 353 Query: 288 ISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCIS 347 ++A + ++ + + + ++ I + I + P++YL + Sbjct: 354 --LLATPLSYVRPRQGRWYKLVPAILIYVAGVLVVISLKDTITK-GKLSPVIYLAALLMM 410 Query: 348 SIFLLMIK 355 + + + Sbjct: 411 MVVAMYLN 418 >gi|170018762|ref|YP_001723716.1| permease YjgP/YjgQ family protein [Escherichia coli ATCC 8739] gi|297517383|ref|ZP_06935769.1| hypothetical protein EcolOP_07055 [Escherichia coli OP50] gi|300916914|ref|ZP_07133617.1| conserved hypothetical protein [Escherichia coli MS 115-1] gi|300923636|ref|ZP_07139664.1| hypothetical protein HMPREF9548_01829 [Escherichia coli MS 182-1] gi|300950817|ref|ZP_07164703.1| conserved hypothetical protein [Escherichia coli MS 116-1] gi|300958360|ref|ZP_07170501.1| hypothetical protein HMPREF9547_04074 [Escherichia coli MS 175-1] gi|312972760|ref|ZP_07786933.1| conserved hypothetical protein [Escherichia coli 1827-70] gi|169753690|gb|ACA76389.1| permease YjgP/YjgQ family protein [Escherichia coli ATCC 8739] gi|242378535|emb|CAQ33321.1| ybl135 [Escherichia coli BL21(DE3)] gi|284923006|emb|CBG36098.1| putative permease [Escherichia coli 042] gi|300314944|gb|EFJ64728.1| hypothetical protein HMPREF9547_04074 [Escherichia coli MS 175-1] gi|300415884|gb|EFJ99194.1| conserved hypothetical protein [Escherichia coli MS 115-1] gi|300420077|gb|EFK03388.1| hypothetical protein HMPREF9548_01829 [Escherichia coli MS 182-1] gi|300449912|gb|EFK13532.1| conserved hypothetical protein [Escherichia coli MS 116-1] gi|310332702|gb|EFP99915.1| conserved hypothetical protein [Escherichia coli 1827-70] gi|323936016|gb|EGB32311.1| permease YjgP/YjgQ family protein [Escherichia coli E1520] gi|323941919|gb|EGB38098.1| permease YjgP/YjgQ family protein [Escherichia coli E482] gi|332344938|gb|AEE58272.1| conserved hypothetical protein [Escherichia coli UMNK88] Length = 359 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 48/360 (13%), Positives = 124/360 (34%), Gaps = 3/360 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I + G S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSMGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + IL+ + + + + ++ S + + + Sbjct: 181 DLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLETLDNLAWQSAFTSMDLEELSM 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + YR ++L Q + + L+++ Sbjct: 241 PGNTFSVRQL-NHYIHYLQETGQPSSEYRLALWEKLGQPILTLAMILLAVPFTFSAPRSP 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + + + + + + +++ P+ L L + L + Y + Sbjct: 300 --GMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPIAFVLVALSLVYWYDR 357 >gi|256027205|ref|ZP_05441039.1| hypothetical protein PrD11_04296 [Fusobacterium sp. D11] gi|260494013|ref|ZP_05814144.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33] gi|289765182|ref|ZP_06524560.1| conserved hypothetical protein [Fusobacterium sp. D11] gi|260198159|gb|EEW95675.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33] gi|289716737|gb|EFD80749.1| conserved hypothetical protein [Fusobacterium sp. D11] Length = 359 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 53/340 (15%), Positives = 115/340 (33%), Gaps = 5/340 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YIL + +++ FI + ++ + + S+ +L++ + IP + Sbjct: 1 MKIINKYILDELKGPIILAVFVFTFIFLLDIVVAMMEHIIVKGISVFDVLRLLSFYIPPI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + T +RN+E + + + G S ++KP+L +AI +IF+ + Sbjct: 61 LTQTIPIGMFLGIMICFTKFSRNSESVAMVSAGMSIRDILKPILAIAIGAAIFIVFLQES 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P+ +K + K L+E F D I + K + + + I + Sbjct: 121 IIPRSFIKLKYVGTKIAYENPVFQLKEKTFIDNLDGYSIYVDKVDSDGKAKNIIGFEKSK 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSSTI 238 ++ AII+ + + K I F + + S Sbjct: 181 DKSKFPLVLTGEEAFWKDSAIIVKESQFVSFDETGKKNLIGTFDENRIVLKPNFQELSIK 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + +++ L+ + Y+ E ++L V +I + Sbjct: 241 IKDVEALSITELIRGLKKIEATE---VIKYKIEIFRKLALVFSTVPLAVIGFCLSLGHHR 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 + ++ I + + + NP+ Sbjct: 298 ISKKYSFILAMIIVFAYIIFLNVGIVMATAGKLNPFIATW 337 >gi|157162459|ref|YP_001459777.1| YjgP/YjgQ permease [Escherichia coli HS] gi|188495921|ref|ZP_03003191.1| putative permease, YjgP/YjgQ family [Escherichia coli 53638] gi|209920455|ref|YP_002294539.1| hypothetical protein ECSE_3264 [Escherichia coli SE11] gi|300815539|ref|ZP_07095763.1| conserved hypothetical protein [Escherichia coli MS 107-1] gi|157068139|gb|ABV07394.1| putative permease, YjgP/YjgQ family [Escherichia coli HS] gi|188491120|gb|EDU66223.1| putative permease, YjgP/YjgQ family [Escherichia coli 53638] gi|209913714|dbj|BAG78788.1| conserved hypothetical protein [Escherichia coli SE11] gi|300531468|gb|EFK52530.1| conserved hypothetical protein [Escherichia coli MS 107-1] gi|320201893|gb|EFW76468.1| Permease Ygh-P2, YjgP/YjgQ family [Escherichia coli EC4100B] gi|323183568|gb|EFZ68965.1| hypothetical protein ECOK1357_3348 [Escherichia coli 1357] gi|323946694|gb|EGB42715.1| YjgP/YjgQ permease [Escherichia coli H120] gi|324018178|gb|EGB87397.1| hypothetical protein HMPREF9542_03233 [Escherichia coli MS 117-3] gi|324119791|gb|EGC13671.1| YjgP/YjgQ permease [Escherichia coli E1167] Length = 359 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 49/360 (13%), Positives = 124/360 (34%), Gaps = 3/360 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + IL+ + + + ++ S + + + Sbjct: 181 DLSLESYIYARSATIKDDKTWILHGVNHKKWLNGKETLETSDNLAWQSAFTSMDLDELSM 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + YR ++L Q + + L+++ Sbjct: 241 PGNTFSVRQL-NHYIHYLQETGQPSSEYRLALWEKLGQPILTLAMILLAVPFTFSAPRSP 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + + + + + + +++ P+ L L + L + Y + Sbjct: 300 --GMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYWYDR 357 >gi|237744434|ref|ZP_04574915.1| conserved hypothetical protein [Fusobacterium sp. 7_1] gi|229431663|gb|EEO41875.1| conserved hypothetical protein [Fusobacterium sp. 7_1] Length = 359 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 53/340 (15%), Positives = 115/340 (33%), Gaps = 5/340 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YIL + +++ FI + ++ + + S+ +L++ + IP + Sbjct: 1 MKIINKYILDELKGPIILAVFVFTFIFLLDIVVAMMEHIIVKGISVFDVLRLLSFYIPPI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + T +RN+E + + + G S ++KP+L +AI +IF+ + Sbjct: 61 LTQTIPIGMFLGIMICFTKFSRNSESVAMVSAGMSIRDILKPILAIAIGAAIFIIFLQES 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P+ +K + K L+E F D I + K + + + I + Sbjct: 121 IIPRSFIKLKYVGTKIAYENPVFQLKEKTFVDNLDGYSIYVDKVDSDGKAKNIIGFEKSK 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSSTI 238 ++ AII+ + + K I F + + S Sbjct: 181 DKSKFPLVLTGEEAFWKDSAIIVKESQFVSFDETGKKNLIGTFDENRIVLKPNFQELSIK 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + +++ L+ + Y+ E ++L V +I + Sbjct: 241 IKDVEALSITELIRGLKKVEATE---VIKYKIEIFRKLALVFSTVPLAVIGFCLSLGHHR 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 + ++ I + + + NP+ Sbjct: 298 ISKKYSFILAMIIVFAYIIFLNVGIVMATAGKLNPFIATW 337 >gi|217966587|ref|YP_002352093.1| permease YjgP/YjgQ family protein [Dictyoglomus turgidum DSM 6724] gi|217335686|gb|ACK41479.1| permease YjgP/YjgQ family protein [Dictyoglomus turgidum DSM 6724] Length = 364 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 58/358 (16%), Positives = 118/358 (32%), Gaps = 3/358 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K++ YI I F + + + + + + + + S ++LK+ Y IP++ Sbjct: 6 KTYHKYIFSEILGPFFLGIFGFILVMLIQILYEFSDFIIMRRVSFEVVLKLLYYKIPSLF 65 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 V P + R+ E+ + ++G ++L L +ILLS+ L+ + Sbjct: 66 VFVIPVSLLFAIIFSFGRLMRDGEIFAMRSSGIYFLSLTLTPLLFSILLSLILWFFTYSL 125 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ +L K EN+FF ++ Y + K N + +V + Sbjct: 126 IPESNYRSNRLIQKYFFLNPAPIKGENVFFHDEEGRYYYVKKIIENRNVMQNVLVFDTSS 185 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + +R ++IL +G VH S + KF+ + + Sbjct: 186 SNKYPIIYTAEEAIWNRDSLILKNGVVHHLGDDSFVVWEGKFEEFKINLPQDFMYIFYRD 245 Query: 242 --ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + + L N +Y E + R+ Q + IF L+ Sbjct: 246 RTPQEMPTNEL-KKRINVYKKAGISARSYLVEDYLRIAQSIAVPIFALMGFSVILLTGRG 304 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + I +G +P+ L S+ + + K + Sbjct: 305 GRLWGTAFSIIIAFFYYGFNIIARSFGEYAVFSPFLSAWLPNITLGSLSLGVFIWKVR 362 >gi|222034702|emb|CAP77444.1| hypothetical protein LF82_487 [Escherichia coli LF82] gi|312947540|gb|ADR28367.1| hypothetical protein NRG857_14785 [Escherichia coli O83:H1 str. NRG 857C] Length = 359 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 49/360 (13%), Positives = 125/360 (34%), Gaps = 3/360 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + +L+ + + + + ++ S N + + Sbjct: 181 DLSLESYIYARSATIEDDKTWVLHGVNHKKWLNGKETLETLDNLAWQSAFTSMNLEELSM 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + YR ++L Q + + L+++ Sbjct: 241 PGNTFSVRQL-NHYIHYLQETGQPSSEYRLALWEKLGQPILTLAMILLAVPFTFSAPRSP 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + + + + + + +++ P+ L L + L + Y + Sbjct: 300 --GMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPIAFVLVALSLVYWYDR 357 >gi|114704780|ref|ZP_01437688.1| hypothetical protein FP2506_07586 [Fulvimarina pelagi HTCC2506] gi|114539565|gb|EAU42685.1| hypothetical protein FP2506_07586 [Fulvimarina pelagi HTCC2506] Length = 360 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 42/349 (12%), Positives = 104/349 (29%), Gaps = 4/349 (1%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y R +F + + + + +I +++ + +SL +LL S +P + Sbjct: 5 TLNRYFFRLYLVNFFSTVVAVSALVLLIDLVELGRRSVLADQSLGVLLLFSALRVPAFME 64 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 PF + L S+NR EL++ G S ++ P + ++ L + + N + Sbjct: 65 QAFPFIILFSSIFTLISLNRRLELVVARAAGVSAWQILMPFIAGSLFLGLLATFAYNPLS 124 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 ++ + + A+ S + + R + D I + S Sbjct: 125 AYTKAQAANIESAAEGREVASSALQTPWLRQNADGVRSIMGATQVAENGRVLSNVSAFVM 184 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 R + I + + Sbjct: 185 ADDGSVETRIDAPRAELGNQEWILLRPRVTRIGYTPRDLVEYRLPTSLRPEYIEQRLADP 244 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 ++ L + + + ++H + Q V L++ A R Sbjct: 245 ETISIWELGSK-IDVAASLGFNSMAFSMQYHTLIAQPALFVAMTLLAATVA--TRFSRTG 301 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + + F ++ +++ + N PI+ + +++ Sbjct: 302 QPGRIFVGGVLAGFVLYVV-TFLAKALGSNDVVPPIVAAWFPVLAAGLF 349 >gi|297569344|ref|YP_003690688.1| permease YjgP/YjgQ family protein [Desulfurivibrio alkaliphilus AHT2] gi|296925259|gb|ADH86069.1| permease YjgP/YjgQ family protein [Desulfurivibrio alkaliphilus AHT2] Length = 361 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 50/360 (13%), Positives = 115/360 (31%), Gaps = 9/360 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y+ R+ + +V I +I +R++ + + + IP + Sbjct: 4 LLDRYLFWQFTRNLALVLGGLVAIYLLIDFFERVDSFLDAGLGIGTAITYLLLKIPLIFE 63 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P C + L +NR+ EL+ + + G S +I+P+L A+ S + + Sbjct: 64 QLIPVCLLLAGIITLGVLNRHNELMALKSGGLSVRRIIRPLLLAALFFSGLALAAGQWLL 123 Query: 123 PKCRSTIKQ-LSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + + + + ++ + + F + + Sbjct: 124 PPTLAETNRLWYEEVRQQTPEGIERNGRIYYRGAKGIYSFAQPDDPASGLPDFSFTAWNE 183 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS--TIV 239 + + + L DG++ + + + + F T++ Sbjct: 184 EYQLARLLTAAIAHWEAGRWTLLDGQLKVLTADDQYRTTI-FNEMTIELPERPEDFFLPP 242 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 ++ LS LL R E ++++ + L+ I Sbjct: 243 YALAERPLSELL--ARALAPEDSPRRYEARLELQQKISYIFLGLPLLLVGIPLLLAMHRG 300 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--FCISSIFLLMIKKK 357 R R + S ++F V WG I + + P L +L S+ I ++ Sbjct: 301 RGRDLALAVPASCIMAFAV-WGLWSICQALASAGHLSPALAAWLVHLLAGSLGFYFILRQ 359 >gi|301643655|ref|ZP_07243696.1| conserved hypothetical protein [Escherichia coli MS 146-1] gi|301078039|gb|EFK92845.1| conserved hypothetical protein [Escherichia coli MS 146-1] Length = 349 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 47/352 (13%), Positives = 121/352 (34%), Gaps = 3/352 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I + G S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSMGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + IL+ + + + + ++ S + + + Sbjct: 181 DLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLETLDNLAWQSAFTSMDLEELSM 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + YR ++L Q + + L+++ Sbjct: 241 PGNTFSVRQL-NHYIHYLQETGQPSSEYRLALWEKLGQPILTLAMILLAVPFTFSAPRSP 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 + + + + + + +++ P+ L L + L Sbjct: 300 --GMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPIAFVLVAL 349 >gi|121997476|ref|YP_001002263.1| permease [Halorhodospira halophila SL1] gi|121588881|gb|ABM61461.1| permease YjgP/YjgQ family protein [Halorhodospira halophila SL1] Length = 350 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 38/357 (10%), Positives = 108/357 (30%), Gaps = 8/357 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ Y+ R + + L++ I+ + +V ++ + V+ +L + P + Sbjct: 1 MRILTGYLARTVIAASLVALAAILALDFVFSMV---DGVADDGLDTTTMLLKALLGAPAL 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 PF + L + EL + G S + + VL ++L++ + Sbjct: 58 AYEAFPFATLIGALMGLGGLAARQELTAMRAAGVSVVQIAGAVLVGGVILALLATAVGEL 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P A + + D +++ + + L+ + + + Sbjct: 118 VVPPAERQ-AAAVRGLSEADELRTGPDGALWARDGRDFLRAERPRSASHLESVTLYRFVE 176 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 Q + A + + L + + ++ ++ + +V Sbjct: 177 GQLTERIDADGAHYEDGQWR--LEGVVKTVYADHRLERRELEAWAWQGALSPDVLAVVVA 234 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + + L + YR +++ L + L++I Sbjct: 235 DPSTLPVPEL-WTYIQYLDANELDSGPYRLALWEKVATPLATLAMLLVTIPLVFTAVRSS 293 Query: 301 QRKKIHPIFISLSISFGVFW-GFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + I + + ++F + P +L + F ++ + + Sbjct: 294 GAGQRIVIGVLVGVAFFLLNRALGQAGVVYGVPPSLSALLPVVAFAALGLWGTLRVR 350 >gi|194431684|ref|ZP_03063975.1| putative permease, YjgP/YjgQ family [Shigella dysenteriae 1012] gi|194420040|gb|EDX36118.1| putative permease, YjgP/YjgQ family [Shigella dysenteriae 1012] gi|320180990|gb|EFW55911.1| Permease Ygh-P2, YjgP/YjgQ family [Shigella boydii ATCC 9905] gi|332086635|gb|EGI91775.1| hypothetical protein SB521682_3569 [Shigella boydii 5216-82] gi|332088218|gb|EGI93339.1| hypothetical protein SD15574_3351 [Shigella dysenteriae 155-74] Length = 359 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 48/360 (13%), Positives = 125/360 (34%), Gaps = 3/360 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + ++ +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVALMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + +L+ + + + ++ S + + + Sbjct: 181 DLSLESYIYARSATIEDDKTWVLHGVNHKKWLNGKETLETSDNLAWQSAFTSMDLEELSM 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + YR ++L Q + + L+++ Sbjct: 241 PGNTFSVRQL-NHYIHYLQETGQPSSEYRLALWEKLGQPILTLAMILLAVPFTFSAPRSP 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + + + + + + +++ P+ L L + L + Y + Sbjct: 300 --GMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPIAFVLVALSLVYWYDR 357 >gi|259907067|ref|YP_002647423.1| Inner membrane protein [Erwinia pyrifoliae Ep1/96] gi|224962689|emb|CAX54144.1| Inner membrane protein [Erwinia pyrifoliae Ep1/96] gi|283476867|emb|CAY72716.1| beta-lactamase/D-alanine carboxypeptidase ampH [Erwinia pyrifoliae DSM 12163] Length = 358 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 42/355 (11%), Positives = 117/355 (32%), Gaps = 2/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + + + +V ++ +I+ + ++ ++ + +P + + Sbjct: 5 LDRYIGKTIFNTIMATLFMLVSLSGIIKFVDQLRKTGQGEYTVLGAGLYTLLSVPKDIEI 64 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L ++ + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 65 FFPMAALLGALLGLGALAQRSELVVMQASGFTRMQIAASVMKTAIPLVLLTMAIGEFVAP 124 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+ + + + L+ + D+ + N + + Sbjct: 125 QGEQMARNYRAQQLMGGSLLSTQSGLWAKDGDNFIFIERIRDGNQLSGISIYNFDHERRL 184 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-DISIMKFKSYTLQTESANSSTIVLKA 242 + YA S + D++ L + S + S + + L Sbjct: 185 KTVRYAASAKYNADKKLWELAQVDQSDLSDAQQIKGSQTLSGEWNTTLTPDKLGVVALDP 244 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 ++S L + ++ Y+ ++ Q L + L+++ Sbjct: 245 GALSISGLYS-YSKYLKQSGQMAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVSM 303 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 IS F V + + P + L + +++K++ Sbjct: 304 GMRVVTGISFGFLFYVLDQIFGPLSLVYNIPPILGALLPSAAFFAISLAMLVKRR 358 >gi|193062018|ref|ZP_03043114.1| putative permease, YjgP/YjgQ family [Escherichia coli E22] gi|300824069|ref|ZP_07104190.1| conserved hypothetical protein [Escherichia coli MS 119-7] gi|331669796|ref|ZP_08370641.1| putative permease [Escherichia coli TA271] gi|192932238|gb|EDV84836.1| putative permease, YjgP/YjgQ family [Escherichia coli E22] gi|300523459|gb|EFK44528.1| conserved hypothetical protein [Escherichia coli MS 119-7] gi|331062709|gb|EGI34623.1| putative permease [Escherichia coli TA271] Length = 359 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 50/360 (13%), Positives = 126/360 (35%), Gaps = 3/360 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + IL+ + + + I+ ++ S N + + Sbjct: 181 DLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLEILDNLAWQSTFTSMNLEELSM 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N N + YR ++L + + L+++ Sbjct: 241 PGNSFSVRQL-NHYINYLQETGQPSSEYRLALWEKLGHPILTLAMILLAVPFTFSAPRSP 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + + + + + + +++ P+ L L + L++ + + Sbjct: 300 --GMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVAALGLPMAFVLAALILVYLFDR 357 >gi|119944177|ref|YP_941857.1| permease YjgP/YjgQ family protein [Psychromonas ingrahamii 37] gi|119862781|gb|ABM02258.1| permease YjgP/YjgQ family protein [Psychromonas ingrahamii 37] Length = 354 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 39/339 (11%), Positives = 103/339 (30%), Gaps = 3/339 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + I + +S ++ ++ +I+ ++++ + + IP Sbjct: 1 MGILDRYIGKTIFAATFLSLFVLIGLSSIIKFVEQMGSIGVGSYDAWNAAYFVILKIPIE 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L S+ ++EL+++ G S++ + VL AI + I + + Sbjct: 61 LSVFFPMAALIGALIGLGSLANSSELVVMQAAGISKLRIAGAVLKTAIPMVIVVMVLTEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + A+ + ++ + D + N + Sbjct: 121 VVPITDKEAYSMRYMAKRGEVQVSNQYGVWVKDADSFVSIERMNSKNELFHVQLYFFDEN 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + A+ + D ++ M + + I+ Sbjct: 181 LKLDHAILARKAAFKEGSWF--FGDVSQTNFLEDRTEVKRMSNYIWETKLTPKKLEVILG 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + + ++ + N + + + F ++ V+ L+S+ Sbjct: 239 EPDKMSMRDIYNYII-YLENNEQDAKRFWLIFWRKAVLPFTIVVMMLLSVSFIFGGLRSV 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL 339 I+ +F V + P + L Sbjct: 298 TMGTRLIFGIAAGFTFYVSGELFGPFSLVFNWPPILGAL 336 >gi|191172563|ref|ZP_03034103.1| putative permease, YjgP/YjgQ family [Escherichia coli F11] gi|190907231|gb|EDV66830.1| putative permease, YjgP/YjgQ family [Escherichia coli F11] gi|324011926|gb|EGB81145.1| hypothetical protein HMPREF9533_04084 [Escherichia coli MS 60-1] Length = 359 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 50/360 (13%), Positives = 123/360 (34%), Gaps = 3/360 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 GASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + IL+ + + + ++ S N + + Sbjct: 181 DLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLETSDNLAWQSTFTSMNLEELSM 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + YR ++L Q + + L+++ Sbjct: 241 PGNTFSVRQL-NHYIHYLQETGQPSSEYRLALWEKLGQPILTLAMILLAVPFTFSAPRSP 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + + + + + + +++ P+ L L + L + Y + Sbjct: 300 --GMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPIAFVLVALSLVYWYDR 357 >gi|218459006|ref|ZP_03499097.1| putative permease protein [Rhizobium etli Kim 5] Length = 250 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 92/236 (38%), Positives = 149/236 (63%), Gaps = 1/236 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YILR +G+ FL++ L ++ I W Q+LQRINLV+ S +S+ K++ ++P++ Sbjct: 11 MKLLETYILRRVGQMFLVALLPVLAIIWTTQVLQRINLVTDSGQSIGSFAKLATMILPSI 70 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T LT+MN ++EL +ID G R LI+P+L LA ++S+F F +NI Sbjct: 71 IPVVLPFALVIAITQTLTTMNNDSELTVIDAAGARRSILIRPILLLAAVISVFSFFVDNI 130 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 +EP+ ++ +Q+ A+ L S +EE F +LD+ LY++IS+ L+G+F+ D RD Sbjct: 131 VEPRAKTVARQMIAETYADLLSSVIEEKTFRKLDEGLYVQISQRLAGRMLKGLFVADERD 190 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 IYYA+ G++D +I++DGEVHRK+P ++S++ F SY+ S Sbjct: 191 PAYELIYYAKEGAVDDTGTTLIMHDGEVHRKTPDG-NVSVINFDSYSFDLSDMTES 245 >gi|308272621|emb|CBX29225.1| hypothetical protein N47_J02060 [uncultured Desulfobacterium sp.] Length = 409 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 64/363 (17%), Positives = 133/363 (36%), Gaps = 12/363 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 Y+ + I F ++ LF F+ + +IL NLV + SL + + Y+IP L Sbjct: 20 TIVSRYLFKEILSPFAINTLFFTFLFLMAKILFITNLVVNYNMSLPKIGLMLLYIIPNFL 79 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 V P M + + E++ + G S L+ PVL + I F+ Sbjct: 80 VFVIPMSVMMAILLTFLRFSSDNEIIALKTGGISIYGLLPPVLIFCFIGCILTFLISLYA 139 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSRD 180 P R +I++L+ + + L+E F D+ + ++K + + L +F+ D R Sbjct: 140 IPWGRLSIEKLTMEIAQSNFEIGLKERTFNDNFKDIMLYVNKVDLKKDELIDVFVEDGRS 199 Query: 181 TQTHKIYYAQSGSIDLDR----QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 A G + + + L DG +++ + +K ++ + F +Y + + N+ Sbjct: 200 EDMASTIIAPKGVLLFEENRLSFRLRLYDGVINQVNTKNKSVNSIGFDTYDINLDLKNAF 259 Query: 237 TIVLKAND------QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 + + K LL+ + E HK+ + + G++S+ Sbjct: 260 SEMEKTGQRKNEKKMYFYELLDYIDSFKIKNSRYYNALF-ELHKKFSVPFACFVLGILSV 318 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 + + + I + + + + P+ L I+ Sbjct: 319 ALGTQLKSATRSFGLGLGLIFFLLYYLILSVGYALGETGFYPPFIGMWAPNILIGSIGIY 378 Query: 351 LLM 353 L + Sbjct: 379 LFI 381 >gi|281422528|ref|ZP_06253527.1| putative membrane protein [Prevotella copri DSM 18205] gi|281403352|gb|EFB34032.1| putative membrane protein [Prevotella copri DSM 18205] Length = 413 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 51/363 (14%), Positives = 112/363 (30%), Gaps = 7/363 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPTV 60 K + YI++ + S I+ IA V + ++ + I+ +P Sbjct: 54 KKLDWYIIKKFLGYYFFSIALIISIAIVFDFNENLSKFTEHHAPARAIIFDYYANFVPYF 113 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + + T + N+E++ I +G S L++P + +LLS F Sbjct: 114 ANLFSALFVFVAVILFTTKLASNSEIIAILASGVSFKRLLRPYMITCVLLSALSFGLSAY 173 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + E + N G + +D Sbjct: 174 VIPHGTVIRQNFETMYKNKKKNTSAENVQLQVDKGVIAYMQHYDNSMKRGYGFCLDKFQD 233 Query: 181 TQTHKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A I + L++ ++ + + + I+ K + E + Sbjct: 234 KKLVSHLTAMDIQYDTISDSKYHWKLSNWKIRKLQGMKEHITSGAQKDTIIMMEPTDLVY 293 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L + N + Y E+HKR+ I +I + A Sbjct: 294 SKGQQETFTSPELRDYISKQINRGSGNVVQYEVEYHKRIASSFASFILTIIGVSL---SA 350 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 R+ + + L++SFG + Q + + + +I +K Sbjct: 351 RKRKGGMGAALGVGLALSFGYIMLQTVSATFAIQANFPSVLAAWLPNFLFAIVAYFCYRK 410 Query: 358 YTK 360 + Sbjct: 411 APR 413 >gi|242279363|ref|YP_002991492.1| permease YjgP/YjgQ family protein [Desulfovibrio salexigens DSM 2638] gi|242122257|gb|ACS79953.1| permease YjgP/YjgQ family protein [Desulfovibrio salexigens DSM 2638] Length = 376 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 40/354 (11%), Positives = 96/354 (27%), Gaps = 9/354 (2%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y+L+ + I + + R++ + + +LK +P + + P Sbjct: 13 YVLKQNIFLMCVCLGVGTGIYLLSDLFDRLDDFIEAGLGMGTILKYFLVKMPLIFSQILP 72 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 F + L M R+ ELL + G S I ++ + A++ S + +I Sbjct: 73 AVFLISMIVQLCVMARSKELLALRTGGLSLIWFLRFFVIYAVIWSFGQLLFSQVIGVYGE 132 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTH-- 184 ++ + + + ++ + P V Sbjct: 133 QEAYRIWKEDVRKSMLDKRVLKNIWLKEGRFVVEAKEVMPFGNRAKDITVYEFAEGNGGI 192 Query: 185 KIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAND 244 K + + L + + + L + Sbjct: 193 KRVITSESAEVSSKYGWKLENAVELSPDKFASQKHPIFTMPIKLNLNVFKVVDPDIDPAQ 252 Query: 245 QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKK 304 L L + ++ + +H + + L+S+ Sbjct: 253 LPLWQL-DQVIEQLKLSGSSVDRLITAWHSKWAYAFSLLTMALVSLALVTI-----TENI 306 Query: 305 IHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 I + L+I F ++ + PI+ +L I L + + + Sbjct: 307 YLNIGLGLAIIFT-YYALFMVGASAGDTGALPPIVAAWLGNILVSSLALGRIAW 359 >gi|222054622|ref|YP_002536984.1| permease YjgP/YjgQ family protein [Geobacter sp. FRC-32] gi|221563911|gb|ACM19883.1| permease YjgP/YjgQ family protein [Geobacter sp. FRC-32] Length = 357 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 56/359 (15%), Positives = 118/359 (32%), Gaps = 12/359 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK F ++ R + + I V+ L++I + + + IP V Sbjct: 1 MKIFNRFVAAAYARILCLCLGTFIAIFLVVDFLEKIGRFA--GANPAYIALFFLTRIPEV 58 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + M T L + ++EL + G S + P+L +A +SI Sbjct: 59 ICQTSAMAVLMATLLTLGMFSMSSELTAMRGCGLSLGRIAMPILVIAFSVSILNLAINEY 118 Query: 121 IEPKCRST-IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P+C + + + + DD+ +K + ++P + V Sbjct: 119 VLPRCIVQGQYIREVLIEKKSPNLFFRQMNIWHRDDNFILKANLFDPASGQLKGITVWRM 178 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-DISIMKFKSYTLQTESANSSTI 238 + + LD +L D S + S + L + + + Sbjct: 179 GAGMQPEQRLDAATAKLDAGGWLLTDVVAREFSESNIIKTSEVASMPVPLNLRATDLKVM 238 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 +++ + L Y ++ H R++ P++ + + A + Sbjct: 239 RKFSDNMGIREL-AAYCEKLRKGGYDPTRYLAQMHGRISLAFAPLVMAFLGVPFAVRG-- 295 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF----LFCISSIFLLM 353 R I SL I FG F + I+ Q P++ + +F + I+ + Sbjct: 296 SRSSGIALGISASLGIGFGFF-VLNSIVLSFGQAGVLSPVISAWSTNGIFLMIGIWFAL 353 >gi|183600431|ref|ZP_02961924.1| hypothetical protein PROSTU_04002 [Providencia stuartii ATCC 25827] gi|188020227|gb|EDU58267.1| hypothetical protein PROSTU_04002 [Providencia stuartii ATCC 25827] Length = 358 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 51/355 (14%), Positives = 120/355 (33%), Gaps = 2/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI R I S LM+ +V ++ +I+ ++++ V + + IP + + Sbjct: 5 LDRYIGRTILNSILMTLFMLVSLSGIIKFVEQLRKVGDGEYTTLGAGVFTLLTIPKDIDI 64 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L ++ +EL+++ +G +R+ + V+ AI L I + + P Sbjct: 65 FFPMAALLGALLGLGALASRSELVVMQASGFTRLQIALSVMKTAIPLVIVAMLIGEWVAP 124 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + A+ + + +E ++ + D + + + + + Sbjct: 125 SADQWARNYRAEKIVGNSLVVTDEGMWAKDGPDFIHIQRVSDTTSIQEVSIYRFNEQHKL 184 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK-SYTLQTESANSSTIVLKA 242 + +A SG+ D D Q +L+ + S K + + + L A Sbjct: 185 TSVMFASSGAYDKDNQLWVLSQVDESILSSEKKITGSQRLTYEWKTNLTPEKLGIVSLSA 244 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++ L ++ Y K++ L + +++ Sbjct: 245 DSLSIRGLYQ-YIAYLKESGQVAAVYELSMWKKILAPLSAAVMMFMAVSFIFGPLRTVPM 303 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I F V + P I L + + +L++K+K Sbjct: 304 GVRVVSGIVGGFLFYVLNEGFGKWSLVYSIPPIIAALLPSVLFLGVSIVLLVKRK 358 >gi|256019097|ref|ZP_05432962.1| hypothetical protein ShiD9_09284 [Shigella sp. D9] Length = 359 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 49/360 (13%), Positives = 124/360 (34%), Gaps = 3/360 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + IL+ + + + ++ S + + + Sbjct: 181 DLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLETSDNLAWQSAFTSMDLDELSM 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + YR ++L Q + + L+++ Sbjct: 241 PGNTFSVRQL-NHYIHYLQETGQPSSEYRLALWEKLGQPILTLAMILLAVPFTFSAPRSP 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + + + + + + +++ P+ L L + L + Y + Sbjct: 300 --GMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPIAFVLVALSLVYWYDR 357 >gi|160872818|ref|ZP_02062950.1| permease [Rickettsiella grylli] gi|159121617|gb|EDP46955.1| permease [Rickettsiella grylli] Length = 355 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 43/353 (12%), Positives = 107/353 (30%), Gaps = 2/353 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+ R I + L ++ + +IQ++ + + +L +P+ Sbjct: 1 MNIIDRYLGRTIIHTTLSVLGILLILFALIQLISETRDIGTGHYTLTSAFSYVLLTLPSQ 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 P + + L +++++EL+I+ G S + ++ + + + Sbjct: 61 FYNFFPIAILLGSILGLNVLSKHSELMILHANGVSLYQMAWSLIKATLWMVFITVLIGEG 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + ++ + D +I I L + D Sbjct: 121 LAPHAARLAESHKFFLTTKGQTLTTQQGSVWIRDGHNFIYIQSILDPTHLNHVNCYQFDD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ +A D + + + + + ++ Sbjct: 181 DNNLLKASFAK-QVNYKAKAWHAYDIATSLITLNKVKKKFIAHEIWPFSFSPKLLTISII 239 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K + +L L + + Y F KR+ + + + ++I + K Sbjct: 240 KPEEMSLRQL-HEYIHYRKKNHLNTSPYSFAFWKRIVEPISLWVMMCLAIPFSFKHLRTL 298 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 I++ SF + F + Q P ++ L + LLM Sbjct: 299 ATSLKTLAGITIGFSFYLLNNFLGPFAIVYQWPPFLAALLPLFIFMLIAILLM 351 >gi|58580459|ref|YP_199475.1| hypothetical protein XOO0836 [Xanthomonas oryzae pv. oryzae KACC10331] gi|58425053|gb|AAW74090.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC10331] Length = 396 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 42/364 (11%), Positives = 105/364 (28%), Gaps = 13/364 (3%) Query: 5 ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 + Y+ R + + L++ ++ + V + + + + Y +P + Sbjct: 37 DWYVGRVVLSTVLLTWAVLLGLDLVNAFASEAKDIGQGSYTFGHAVAYVAYTVPRRAYTL 96 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P + L + +EL + G SR + V+ LL+ + IS I P Sbjct: 97 FPTAAVIGALMGLGQLAATSELTALRALGVSRKRMSASVVAAMALLTASMVISGETIGPW 156 Query: 125 CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKI--------SKYNPNNTLQGIFIV 176 ++ L A A+ + + + D ++ + L + + Sbjct: 157 AQNQADTLKASARYNSDMAASLYAGLWAREGDTFLNALSGEEKLLDGGDTALDLHDVRLY 216 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + S + D L S + Q A + Sbjct: 217 HLDSSGRMQQLTYASVAEHRDG-RWTLRQVRRDTFQERSVQRETFPELPWQSQLNPAALA 275 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + K + + L + + Y ++ R L + + +I + Sbjct: 276 AGLAKPRNLSAHDL-EQSIEYRSRNGLDARDYEDQYWSRWFYPLNVLALCMAAIPFSFGS 334 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-NPYYIPILYLFLFCISSIFLLMIK 355 R +F+ + + G + + Y L + + + + Sbjct: 335 L--RSGGLGKRLFLGILFALGFWLLQLFFGRMAGALKLDYRIAYALPPMVMLGVSAWLFR 392 Query: 356 KKYT 359 ++ + Sbjct: 393 RRSS 396 >gi|301058944|ref|ZP_07199913.1| permease, YjgP/YjgQ family [delta proteobacterium NaphS2] gi|300446940|gb|EFK10736.1| permease, YjgP/YjgQ family [delta proteobacterium NaphS2] Length = 358 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 48/363 (13%), Positives = 122/363 (33%), Gaps = 19/363 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + YI+R I + + C ++ I + + + ++ + I L Sbjct: 2 IIDRYIMREISKPAMTICTVLMGIFGSYIATRYLEDAVQGQLPGSTVILLVLLRIAISLE 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + N E+ + G S + ++KPV+ LA+ + + I Sbjct: 62 VLLPTTLYLSVMIAFGRFYMNAEMTGMSACGISMVRVLKPVMLLAVTAGMIVACFSLYIR 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + +L A++ + ++ F+ ++D + + + + + + Sbjct: 122 PWAWNQFFELKTGAKVDFDITRMKGGNFYEIEDGERVLFADKVDHGKHRALHVFMQIKRH 181 Query: 183 THKIYYAQSGSIDL-----DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + ++ +G ++ S K I++F++ + S N Sbjct: 182 GELEIVYAESATQRFRNTTPEPVLVFQNGRLYTFSETEKTWKILQFRNLEMSLTSNNVEP 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + KA + L + +E RLT ++ L+ + Sbjct: 242 LKQKAKAFSTEQLWH----------SDHPEALAELQWRLTAPFSTILLALLGVPL---SR 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 ++ K + + + + F V++ S I K + ++ I LL++ + Sbjct: 289 SFPRQGKYTKVPLGI-LVFAVYYNLSAITKKWVGQGVVGGVPGIWWIQILLACLLLVLLR 347 Query: 358 YTK 360 + Sbjct: 348 PPR 350 >gi|29654138|ref|NP_819830.1| putative permease [Coxiella burnetii RSA 493] gi|161831591|ref|YP_001596891.1| putative permease [Coxiella burnetii RSA 331] gi|29541404|gb|AAO90344.1| hypothetical membrane spanning protein [Coxiella burnetii RSA 493] gi|161763458|gb|ABX79100.1| putative permease [Coxiella burnetii RSA 331] Length = 355 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 47/358 (13%), Positives = 113/358 (31%), Gaps = 4/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI I + + L ++ I ++ + +++ + S L +P+ Sbjct: 1 MPLLNRYIRNAIITATALVMLVLLGIEMFMEFIGQLSQIGSVHYGLGQAFLYVLTQLPSD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L + ++EL+++ G S + V+ A+L+ + + + Sbjct: 61 LYQLFPMAGFLGCLIGLGRLASSSELMVMRTAGVSIAGVTWAVVKAALLMMVVMTFIGEV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P+ ++ ++ +++ S N + + Sbjct: 121 IAPQLEASGEETKLTELSKAVGYKALGDVWLHGAQSFIHIGSVDAKNKISEVSQFFINNK 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 Q YA G IL + + + +P + T+ + Sbjct: 181 HQLLSAVYAPKGEYVKG--HWILYNVKQTQFTPNRTTEKKIAKFPLTIVFNPDHLQQGRK 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + Q++ L + + + Y F +R Q L V+ + + Sbjct: 239 MVDRQSIVGLYHTIRYHQQAGLQT-SRYVFAFWQRFIQPLTTVVMICLGVPFIFGSLRQA 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSY-IIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I + +F + F + P + ++ LF + + LL ++ Sbjct: 298 SMGLRILTGIVIGFAFYMLNQFFGPFAMVYQIPPIFAALMPTVLFAVGCVILLRYSRR 355 >gi|255263663|ref|ZP_05343005.1| permease YjgP/YjgQ family protein [Thalassiobium sp. R2A62] gi|255105998|gb|EET48672.1| permease YjgP/YjgQ family protein [Thalassiobium sp. R2A62] Length = 363 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 41/336 (12%), Positives = 100/336 (29%), Gaps = 9/336 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y R +FL + I + +++++ S S + ++ P L Sbjct: 2 ILHRYFARRFFLAFLGVFVIFFAILGFLDMVEQLGKFSGDDVSFTQTVGLTLLNTPQALY 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + T + S+ R++E+++ G S I + +F+A+L+ +F N I Sbjct: 62 RILPLVMILSTIALFLSLARSSEMVVTRAAGRSAIRALSAPIFVAVLIGLFAVAVLNPIV 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEE----NLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 ++ ++ + L + + ++ + + Sbjct: 122 AATSQEYEKRASDYRSDDAQVLSVSAEGLWLRQGDNTQQTVIRAEAATLEGTELSRVTFL 181 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK--SYTLQTESANSS 236 T I ++ S L A L + + + + S K Sbjct: 182 SFTDAGPITRIEADSARLTPGAWELTNAKSWPLDAPNPEASSTKHDVLRVPSTLTRDQIR 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + L + F+ L F V +++ A Sbjct: 242 DGFGTPSAIPIWEL-PAFIKQLETAGFSARRHAVWFNMELALPAFMVSMVMVA--AGLTM 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN 332 R + + ++ + F ++ ++ E Sbjct: 299 RHQRGGRVGLSVLAAIMLGFAFYFLRNFAQILGENG 334 >gi|296137010|ref|YP_003644252.1| permease YjgP/YjgQ family protein [Thiomonas intermedia K12] gi|295797132|gb|ADG31922.1| permease YjgP/YjgQ family protein [Thiomonas intermedia K12] Length = 365 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 49/359 (13%), Positives = 111/359 (30%), Gaps = 8/359 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M++ ++L + + + L + + + I +L ++ + SL+ L +P+ Sbjct: 1 MRTVRRFLLLHVLSAVGLVTLAFLALLFFIDMLNDLSNLGKPGFSLSGTLLHVALSMPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 V P + L S+ ++E I+ +G S + +L LA L + LF+ Sbjct: 61 AYEVLPIATLVGGVFALASLAASSEFTILRISGLSPRAALGLLLQLAAALVVTLFLLGEW 120 Query: 121 IEP---KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD 177 + P + + ++ S + + + I N L I I Sbjct: 121 LAPAAGQLSARLQAGGGSGIGTQLASGVWLRNDSDRSGNQTVNIKAINTRGDLTDIHIYV 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK---DISIMKFKSYTLQTESAN 234 +L + + + + + + Sbjct: 181 LNAQAQIAAELHAPSGQYEGGGTWMLQNVTRTELPQQTGAALKVIQLPSYRWRTSLSPSV 240 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 ++L + + L + + E Y + K+L V+ L+++ A Sbjct: 241 LGVLLLSPDKMSAIDL-WRYIQHLRANHQAAERYEIQLWKKLFYPFSAVVMLLLALPFAY 299 Query: 295 KRALVRQRKKIHPIFISLSISFGVFW-GFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 + I L I+F + FS + P + + LF + + Sbjct: 300 LHTRSKGVSGKVLAGIVLGIAFILLNTLFSSLGILGTWPPAITAAMPMLLFGGLGLIVF 358 >gi|322514886|ref|ZP_08067903.1| inner membrane protein YjgP [Actinobacillus ureae ATCC 25976] gi|322119140|gb|EFX91290.1| inner membrane protein YjgP [Actinobacillus ureae ATCC 25976] Length = 367 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 50/361 (13%), Positives = 121/361 (33%), Gaps = 15/361 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + I +S L ++ + + Q++ +N S +++L + G +P + Sbjct: 2 ILSRYLTKEIFKSQLAILFILLLMFFSQQLITVLNSAVSGKVPTDLVLSLLGLGMPALAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + L +E+ ++ G + L + FL+I + + + Sbjct: 62 FMLPLSLFVALLLTLGRFYTESEITVMRACGIGQSLLTQVAFFLSIFTTALAVYNVFWLT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD--SRD 180 P + ++ A+A+ FS L F + + N N L I++ + Sbjct: 122 PWAINKQSEMLAEAKSNPRFSALSAGQFMTAGGYVLFIENINNEQNKLNDIYVFQPDQQK 181 Query: 181 TQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+SG + Q + L + + + + D I F +Y + + Sbjct: 182 KNRPSVVVAESGQLQGLPNGDQILTLENSTRYEGTENTADFRISHFDNYQAYLGYQDVDS 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + L+ + ++E R + L+++ + Sbjct: 242 NEKLVQRADFNKLMT----------DSSNEAKAELQWRFALIFAVPLMALLAVPMSSVNP 291 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + K+ P + I F + + + + L F I ++ + K Sbjct: 292 RQGRFAKVIPAVLLYLIYFLLQSSLKSSGASGKLDATLLMPLVSIAFFILAMVMNFWDTK 351 Query: 358 Y 358 + Sbjct: 352 W 352 >gi|160884582|ref|ZP_02065585.1| hypothetical protein BACOVA_02569 [Bacteroides ovatus ATCC 8483] gi|260174906|ref|ZP_05761318.1| hypothetical protein BacD2_23825 [Bacteroides sp. D2] gi|315923149|ref|ZP_07919389.1| conserved hypothetical protein [Bacteroides sp. D2] gi|156110321|gb|EDO12066.1| hypothetical protein BACOVA_02569 [Bacteroides ovatus ATCC 8483] gi|313697024|gb|EFS33859.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 365 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 44/362 (12%), Positives = 120/362 (33%), Gaps = 7/362 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPTV 60 K + YI++ +++ + I+ IA V ++++ + + I+ + IP Sbjct: 8 KRLDWYIIKKFLGTYVFAIALIISIAVVFDFNEKMDKLMEHEAPWDKIIFEYYMNFIPYF 67 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +P + + + N+E++ + +TG S +++P + A ++++ F + Sbjct: 68 SNLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMMRPYMISAAIIALVTFTLSSY 127 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + PK T + + + + + N T + D Sbjct: 128 VIPKGSVTRLNFEDRYIKPKKQNSVSNVQLEVDSGVIAYIDNYNNAMKTGNRFSLDKFVD 187 Query: 181 TQTHKIYYAQSGSIDLDR-QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + A+ + D ++D V + + I+ + E ++ + Sbjct: 188 KKLVSHLTARRITYDTTTVHKWTIHDYMVRELDGLKEKITKGDRIDSIINMEPSDFLIMK 247 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + L + ++ + E+HKR+ I +I + + Sbjct: 248 NQQEMLTSPELSDYIAKQKRRGFANIKEFEIEYHKRIAMSFASFILTIIGVSL----SSR 303 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF-CISSIFLLMIKKKY 358 + + + + F I N P + +++ + + + +K Sbjct: 304 KTKGGMGLHLGIGLGLSFSYILFQTITSTFAVNGNVPPAVAVWIPNILYAGIAFFLYQKA 363 Query: 359 TK 360 K Sbjct: 364 PK 365 >gi|288803319|ref|ZP_06408752.1| membrane protein [Prevotella melaninogenica D18] gi|288334139|gb|EFC72581.1| membrane protein [Prevotella melaninogenica D18] Length = 377 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 117/358 (32%), Gaps = 7/358 (1%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPTVL 61 + YI++ +++ + L I+ IA V + ++ + I+ +P Sbjct: 19 ILDWYIIKKFIGTYIYAILLIISIAIVFDFNENLSKFTQYHAPWRAIIFDYYANFVPYYS 78 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + +P + + + N+E++ + G S L++P + +L++ F + + Sbjct: 79 NLFSPLFVFIAVIFFTSKLAGNSEIISMMAAGVSIRRLMRPYMISCVLIAGLTFYLNSFV 138 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + + + + E F + + G +V +++ Sbjct: 139 IPHGTVIRQNFESLYRNSKKNTSAENVQLFVAKNTTAYIQHYDDQYKRGYGFSLVKTKNK 198 Query: 182 QTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + A D + +++ ++ + + I K L E + Sbjct: 199 KIVSHMTAMEIQYDTVADTKYHWKVSNWKIRTLKGLKEHIQSGASKDTVLLMEPTDLVYS 258 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + LLN + + Y EFHKR+ I +I + + Sbjct: 259 KGQQETFTSPELLNYISKQTSRGSGNVVQYEVEFHKRIAMSFSSFILTIIGLSL---SSR 315 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R+ + I L++SFG + Q+ + I +I + Sbjct: 316 KRKGGMGLYLGIGLALSFGYIMLQTVSATFAIQDDTPPILAAWIPNIIFAIIAYFCYR 373 >gi|206901914|ref|YP_002251684.1| putative permease, YjgP/YjgQ family [Dictyoglomus thermophilum H-6-12] gi|206741017|gb|ACI20075.1| putative permease, YjgP/YjgQ family [Dictyoglomus thermophilum H-6-12] Length = 362 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 55/358 (15%), Positives = 114/358 (31%), Gaps = 3/358 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K++ YI I F + + + + + + + + S +LK+ Y IP++ Sbjct: 4 KTYHKYIFSEILGPFFLGIFGFILVMLIQILYEFSDFIIMRRVSFETVLKLLYYKIPSLF 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 V P + R+ E+ + ++G TL L ++ LS L+ + Sbjct: 64 VFVIPVSLLFAIIFSFGRLMRDGEIFAMRSSGIYFFTLALAPLLFSVFLSFVLWFFTYSL 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ +L K EN+FF ++ Y + K + + +V + Sbjct: 124 IPESNYRSNRLIQKYFFLNPAPVKGENIFFHDEEGRYYYVKKIIEDKNIMQNVLVFDTSS 183 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + +R +++L +G VH + I KF+ + + Sbjct: 184 SNKYPIIYTAEEAVWNRDSLVLKNGVVHHLGDDAFVIWEGKFEEFKINLPQDFMYIFYRD 243 Query: 242 --ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + S L +Y E + R+ Q + IF L+ Sbjct: 244 RTPQEMPTSEL-RKRIEVYKKAGVSARSYLVENYLRIAQSVAVPIFALMGFSVILLTGRG 302 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + I +G + +P+ L S+ + + K + Sbjct: 303 GRLWGTAFSIIIAFFYYGFNIIARSLGEYAVFSPFLSAWLPNITLGSLSLGVFIWKVR 360 >gi|237713241|ref|ZP_04543722.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262406619|ref|ZP_06083168.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294646169|ref|ZP_06723825.1| putative membrane protein [Bacteroides ovatus SD CC 2a] gi|294807861|ref|ZP_06766643.1| putative membrane protein [Bacteroides xylanisolvens SD CC 1b] gi|298484045|ref|ZP_07002214.1| membrane protein [Bacteroides sp. D22] gi|229446708|gb|EEO52499.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262355322|gb|EEZ04413.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292638498|gb|EFF56860.1| putative membrane protein [Bacteroides ovatus SD CC 2a] gi|294444923|gb|EFG13608.1| putative membrane protein [Bacteroides xylanisolvens SD CC 1b] gi|295084257|emb|CBK65780.1| Predicted permeases [Bacteroides xylanisolvens XB1A] gi|298269826|gb|EFI11418.1| membrane protein [Bacteroides sp. D22] Length = 365 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 44/362 (12%), Positives = 120/362 (33%), Gaps = 7/362 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPTV 60 K + YI++ +++ + I+ IA V ++++ + + I+ + IP Sbjct: 8 KRLDWYIIKKFLGTYVFAIALIISIAVVFDFNEKMDKLMEHEAPWDKIIFEYYMNFIPYF 67 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +P + + + N+E++ + +TG S +++P + A ++++ F + Sbjct: 68 SNLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMMRPYMISAAIIALTTFTLSSY 127 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + PK T + + + + + N T + D Sbjct: 128 VIPKGSVTRLNFEDRYIKPKKQNSVSNVQLEVDSGVIAYIDNYNNAMKTGNRFSLDKFVD 187 Query: 181 TQTHKIYYAQSGSIDLDR-QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + A+ + D ++D V + + I+ + E ++ + Sbjct: 188 KKLVSHLTARRITYDTATVHKWTIHDYMVRELDGLKEKITKGDRIDSIINMEPSDFLIMK 247 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + L + ++ + E+HKR+ I +I + + Sbjct: 248 NQQEMLTSPELSDYIEKQKRRGFANIKEFEIEYHKRIAMSFASFILTIIGVSL----SSR 303 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF-CISSIFLLMIKKKY 358 + + + + F I N P + +++ + + + +K Sbjct: 304 KTKGGMGLHLGIGLGLSFSYILFQTITSTFAVNGNVPPAIAVWIPNILYAGIAFFLYQKA 363 Query: 359 TK 360 K Sbjct: 364 PK 365 >gi|293416424|ref|ZP_06659063.1| hypothetical protein ECDG_03180 [Escherichia coli B185] gi|291431780|gb|EFF04763.1| hypothetical protein ECDG_03180 [Escherichia coli B185] Length = 359 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 49/360 (13%), Positives = 124/360 (34%), Gaps = 3/360 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQAMQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + IL+ + + + ++ S + + + Sbjct: 181 DLSLESYIYARSATIKDDKMWILHGVNHKKWLNGKETLDTSDNLAWQSAFTSMDLEELSM 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + YR ++L Q + + L+++ Sbjct: 241 PGNTFSVRQL-NHYIHYLQETGQPSSEYRLALWEKLGQPILTLAMILLAVPFTFSAPRSP 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + + + + + + +++ P+ L L + L + Y + Sbjct: 300 --GMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPIAFVLVALSLVYWYDR 357 >gi|317493504|ref|ZP_07951925.1| YjgP/YjgQ permease [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918447|gb|EFV39785.1| YjgP/YjgQ permease [Enterobacteriaceae bacterium 9_2_54FAA] Length = 359 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 46/354 (12%), Positives = 119/354 (33%), Gaps = 1/354 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK F Y++R I F + ++ + ++ ++ VS + + +P Sbjct: 1 MKIFSRYLIRNIFIGFAAAAGLLIPLFTTFNLMNELDDVSPGGYHWTQAVVVVLMTLPRS 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + PF + L ++++ EL I TG S + L ++L++ L + Sbjct: 61 LIDLGPFIALLGGIVGLGQLSKSMELTAIRTTGFSIFRISIVALCAGLMLTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I Q+ A + N+ + + ++ + + +N G+ I R Sbjct: 121 IASPLEQRALQMKNAAIALDESNDSVGNILWARQGNEFVTVKSLSEDNQPVGVEIFYYRP 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ + Y + LD +L+ R + + + + + + Sbjct: 181 DRSLESYIYAQKATILDGNIWMLSGINEKRWVSGKETVETKESLQWKSIFTGMTLKELTM 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 ++ ++ L N + ++ ++L + + + L++I Sbjct: 241 PSSTFSIKQL-NQYITYLQNTDQPSIEFKIALWQKLGRAILTLAMILLAIPFTFSVPRSP 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 I + + + + + + + I L F ++ +L+ Sbjct: 300 GLGSRLAIGVIVGLFTYISYQIVVNVGLLFSLNAAIVTLTPPAFILAIALVLVY 353 >gi|257466752|ref|ZP_05631063.1| hypothetical protein FgonA2_04880 [Fusobacterium gonidiaformans ATCC 25563] gi|315917901|ref|ZP_07914141.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC 25563] gi|313691776|gb|EFS28611.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC 25563] Length = 358 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 55/359 (15%), Positives = 129/359 (35%), Gaps = 6/359 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL+ ++S FI + I+ + + S+ + +I + +P + Sbjct: 1 MKIIDSYILKECRGPIILSVSIFTFIFLLDIIVAMMENIIVKGISVFDIARILSFYVPPI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + + R++E + +++ G ++KP+L L I F+ + Sbjct: 61 LTQTIPLGLFVGIMITFSKFTRSSEAIAMNSIGMDIRAILKPILTLGIASMFFILFLQES 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P+ ++ L++K L+E F + + I K + GI I ++ + Sbjct: 121 IIPRSYIKLQYLASKIAYENPVFQLKERTFMNNLEGYSLYIDKVERDKHASGILIFENDE 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSSTI 238 I + D +IIL F+ ++ ++ ++ Sbjct: 181 KTIFPIVLVGHQAYWRD-SSIILERANFISFDEKGVRKLTGSFEDKRVELQAYFSDLQIK 239 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 V + ++ LL + Y+ E +++L V+ ++ ++ + Sbjct: 240 VKEIEMMSIGTLLREMKGKSKEEKLI---YKVEINRKLALPFSSVMLSVLGVLLSIGHQR 296 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 +R I +++ + + + + L L + L ++KK+ Sbjct: 297 SGKRAGILVGILTIFFYICLLNVGIVLANVGKIPILLGVWLPNVLLAALTYRLYIVKKR 355 >gi|33862844|ref|NP_894404.1| putative permease [Prochlorococcus marinus str. MIT 9313] gi|33634760|emb|CAE20746.1| possible permease [Prochlorococcus marinus str. MIT 9313] Length = 403 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 46/376 (12%), Positives = 131/376 (34%), Gaps = 22/376 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQ-ILQRINLVSSSTESLNILLKISGYLIPTVL 61 + ++L + L + ++ + + + + L+ L++ +P L Sbjct: 32 LLDRWLLGELIPVLLFAIAAFTVVSVSVGVMFDLVRKIVEFGLPLHFALQVFSLKLPFFL 91 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + T + ++ N+E + + G S ++ P L LA+L++ FI ++I Sbjct: 92 VISFPMATLLATLLAYSRLSSNSEFTALRSLGVSTRRIVAPALALALLMTGLTFIFNDVI 151 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI-------------KISKYNPNN 168 P+ S+ + +A + +++ + + ++ Sbjct: 152 VPRTNSSAEVTIKRALGKAIATEKGKHVVYSRFGTITGAEAEDWNQGLSQLFYAREFLKG 211 Query: 169 TLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 ++ + ++D ++ A+ + +G + +P S ++F Y Sbjct: 212 EMEDVTVLDLSRLGFTQMLKAERAIWNEQEAMWEFFNGNILTLTPRGSTTS-VEFDRYLY 270 Query: 229 QTESANSSTIVLKANDQNLS---FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIF 285 S L + N++ + + + + ++ T + ++F Sbjct: 271 PLTSGPIRVAKLPKDANNMTVAQAMEAASIYTDAGNRKEARRLKVRIQEKFTFPMSCLVF 330 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC 345 GLI K + + ISL + ++ S+ + P+L ++ Sbjct: 331 GLIGSSLGAKP--NSRTSRTQGFGISLLLILA-YYTLSFSFSSLGVTGTLTPMLAAWIPV 387 Query: 346 ISSI-FLLMIKKKYTK 360 S+ ++ ++ ++ Sbjct: 388 FISLAGGGLLLRQASR 403 >gi|258405421|ref|YP_003198163.1| permease YjgP/YjgQ family protein [Desulfohalobium retbaense DSM 5692] gi|257797648|gb|ACV68585.1| permease YjgP/YjgQ family protein [Desulfohalobium retbaense DSM 5692] Length = 358 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 45/344 (13%), Positives = 101/344 (29%), Gaps = 8/344 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+LR L+S + I +I I R++ + + + IP + Sbjct: 1 MTTLHRYLLRQNLYYLLLSLGAGIGIYLLIDIFDRLDDFVGAQAGVEATVLYFAAKIPLI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P F + L+ M R EL ++ G L L A+ S Sbjct: 61 VSQVLPAVFLLSLLAQLSIMRRQQELTALEAGGIPLSRLAVFFLVYAVFWSGLQLGFSEG 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + + + + S + + + + + P V D Sbjct: 121 LGVVGQRKSEAIWEQDVHGHAPSQRTLRDVWFKSEHFVVHMHRVTPRQKTGRKITVYVMD 180 Query: 181 TQTHKIYYAQSG-SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +I + +L++ + + + Sbjct: 181 EDFSRIRTIHRAERFQQQTDSWVLSEVTSLKPHAFTTSAQDRLPLPLQQDLADFLAVDPK 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + +L L + + +E + +H +L V+ L+++ Sbjct: 241 AEPESLSLWQLGHL-ISELRQSGSNVERLATTWHMKLAYGFSLVVMALLALGIVSAS--- 296 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 I I L++ F V++ + + + P + +L Sbjct: 297 --GNIYVNIPIGLTVIF-VYYALFVLGGTLGEKGIVSPWIGGWL 337 >gi|297184152|gb|ADI20271.1| hypothetical protein [uncultured Sphingobacterium sp. EB080_L08E11] Length = 374 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 51/373 (13%), Positives = 115/373 (30%), Gaps = 23/373 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YIL SF ++ + I+ IA V I ++++ + I+ I Sbjct: 1 MNKLDRYILLKFIGSFFLTMVLILSIAVVFDISEKLDDFQNGASMNEIIFDYYINFIAFY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + + T + M N+E++ I +GTS L++P A ++ ++ Sbjct: 61 GNLFSALILFISTIWFTSRMASNSEIVAILTSGTSFRRLLRPYFIGASIICALSLTLNHL 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ K + ++ L + + + D Sbjct: 121 LVPQTNIKRIAFEEKYVTGVNRPISQKMHRQVLPGHYVYFETFSGVRESGYQMTYEVFED 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKS-PISKDISIMKFKSYTLQTESANSSTIV 239 Q A +D L++ + + IS + L S + + Sbjct: 181 HQLKSKLSADFVRLDTATGRWRLDNFRLRTLDEKGGEQISFGRRMDTALAFTSEQIAPKL 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 N L E + +Y+ E +R + + +F L+++ A + Sbjct: 241 NSIATMNSKELSRFIAQEELTGNENIASYQMEMQRRTSYPVSSYVFVLLAVGLA---SQK 297 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP------------------ILYL 341 ++ I I L ++ ++ F + + +++ Sbjct: 298 KRGGLGINIAIGLVLT-AIYIFFMQLSETFAKTGLLSSEGLLGGPLEWIGIQPAEFAVWI 356 Query: 342 FLFCISSIFLLMI 354 + I L Sbjct: 357 PNIVFAIIALWRY 369 >gi|212212730|ref|YP_002303666.1| hypothetical membrane spanning protein [Coxiella burnetii CbuG_Q212] gi|212011140|gb|ACJ18521.1| hypothetical membrane spanning protein [Coxiella burnetii CbuG_Q212] Length = 355 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 48/358 (13%), Positives = 112/358 (31%), Gaps = 4/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI I + + L ++ I ++ + +++ + S L +P+ Sbjct: 1 MPLLNRYIRNAIITATALVMLVLLGIEMFMEFIGQLSQIGSVHYGLGQAFLYVLTQLPSD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L + ++EL+++ G S + V+ A+L+ + + + Sbjct: 61 LYQLFPMAGFLGCLIGLGRLASSSELMVMRTAGVSIAGVTWAVVKAALLMMVVMTFIGEV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P+ ++ ++ A +++ S N + + Sbjct: 121 IAPQLEASGEETKLTALSKAVGYKALGDVWLHGAQSFIHIGSVDAKNKISEVSQFFINNK 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 Q YA G IL + + + +P + T+ + Sbjct: 181 HQLLSAVYAPKGEYVKG--HWILYNVKQTQFTPNRTTEKKIAKFPLTIVFNPDHLQQGRK 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + Q++ L + Y F +R Q L V+ + + Sbjct: 239 MVDRQSIVGLYH-TIRYRQQAGLQTSRYVFAFWQRFIQPLTTVVMICLGVPFIFGSLRQA 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSY-IIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I + +F + F + P + ++ LF + + LL ++ Sbjct: 298 SMGWRILTGIVIGFAFYMLNQFFGPFAMVYQIPPIFAALMPTVLFAVGCVILLRYSRR 355 >gi|242279362|ref|YP_002991491.1| permease YjgP/YjgQ family protein [Desulfovibrio salexigens DSM 2638] gi|242122256|gb|ACS79952.1| permease YjgP/YjgQ family protein [Desulfovibrio salexigens DSM 2638] Length = 386 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 52/362 (14%), Positives = 119/362 (32%), Gaps = 10/362 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK I + + F +S + + + ++LQ +L + + K+ YL P Sbjct: 1 MKLLHRNIFKELISIFTLSISGFMGLILIGRLLQFRDLFMGQSLGALEMAKLFMYLCPFF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+TP + MN + E+ + + G S L+ + +L + F Sbjct: 61 LLMLTPIATMLSIFLTFLRMNADNEITALKSGGLSLYRLLPAPIIFCLLCTGADFYFSLY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 + + + ++ +F + L + + ++ +F+ D+ Sbjct: 121 GLSWGTENFRNALMEFARTQSQLAIQPGVFNKNFPGLVFYADGVDEKSGIMRSVFVRDNT 180 Query: 180 DTQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTES--A 233 A G I D + I L +G+++++ + K + + Sbjct: 181 RKGMTATIVAPLGEIRTDPKMGRLLIHLENGKIYQQEKDQLSVLKFKNYDVRIPLANILK 240 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYR---SEFHKRLTQWLFPVIFGLISI 290 L+ + + L+ + ++ E KRL + ++ G+ ++ Sbjct: 241 GYDVDELRPKEMSWKKLVRISRAGDRAGDIDPGFFKKVQVEVQKRLALPVACLVLGMFAV 300 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 A ++Q+ + + + + P L F I S+ Sbjct: 301 PIACIFRGLKQQYGLIISMGLFLVYYTMLSLGVTFGESGVLTPVIGLWLPNITFAIISVV 360 Query: 351 LL 352 LL Sbjct: 361 LL 362 >gi|323345623|ref|ZP_08085846.1| hypothetical protein HMPREF0663_12382 [Prevotella oralis ATCC 33269] gi|323093737|gb|EFZ36315.1| hypothetical protein HMPREF0663_12382 [Prevotella oralis ATCC 33269] Length = 412 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 50/360 (13%), Positives = 121/360 (33%), Gaps = 8/360 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPTV 60 K + YI++ +++ S L I+ IA V + ++ + L I+ IP Sbjct: 53 KRLDRYIIKKFIGTYIFSILLIIAIAIVFDFNENLSKFTQYHAPLHAIIFDYYANFIPYY 112 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +P + + + N+E++ + G S L++P + +L+S F Sbjct: 113 SNLFSPLFVFIAVIFFTSKLAGNSEIISMLAAGVSFRRLMRPYMISCVLISALSFYLSAY 172 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + + + + + + G + ++ Sbjct: 173 VIPHGTVIRQNFESLYRNNRKLTSADNVQLQVGTGIIAYIQHYDDRSKRGYGFSLDKFQE 232 Query: 181 TQTHKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A S I + + + ++ + + + I+ K +Q E + Sbjct: 233 KKLISHMTATEISYDTISESKYHWTVRNWKIRQLKGLREHITSGGEKDTLIQMEPTDLVY 292 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L + + + Y+ E+HKR+ I +I + + Sbjct: 293 SKGQQETFTSPQLKDYISKQIDRGSGNVVQYQVEYHKRIAASFASFILTIIGVSL---SS 349 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 R+ + I + +SFG + + N P+L ++ I F+ + Sbjct: 350 RKRKGGMGLYLGIGMGLSFG-YILLQTVSSTFAINAGAPPMLAAWMPNILFAFIAYFCYR 408 >gi|257452883|ref|ZP_05618182.1| hypothetical protein F3_07439 [Fusobacterium sp. 3_1_5R] gi|317059425|ref|ZP_07923910.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R] gi|313685101|gb|EFS21936.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R] Length = 358 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 55/359 (15%), Positives = 129/359 (35%), Gaps = 6/359 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL+ ++S FI + I+ + + S+ + +I + +P + Sbjct: 1 MKIIDSYILKECRGPIILSVSIFTFIFLLDIIVAMMENIIVKGISVFDVARILSFYVPPI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + + R++E + +++ G ++KP+L L I F+ + Sbjct: 61 LTQTIPLGLFVGIMITFSKFTRSSEAIAMNSIGMDIRAILKPILTLGIASMFFILFLQES 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P+ ++ L++K L+E F + + I K + GI I ++ + Sbjct: 121 IIPRSYIKLQYLASKIAYENPVFQLKERTFMNNLEGYSLYIDKVGRDKHASGILIFENDE 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSSTI 238 I + D +IIL F+ ++ ++ ++ Sbjct: 181 KTIFPIVLVGHQAYWRD-SSIILERANFISFDEKGVRKLTGSFEDKRVELQAYFSDLQIK 239 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 V + ++ LL + Y+ E +++L V+ ++ ++ + Sbjct: 240 VKEIEMMSIGTLLREMKGKSKEEKLI---YKVEINRKLALPFSSVMLSVLGVLLSIGHQR 296 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 +R I +++ + + + + L L + L ++KK+ Sbjct: 297 SGKRAGILVGILTIFFYICLLNVGIVLANVGKIPILLGVWLPNVLLAALTYRLYIVKKR 355 >gi|294785396|ref|ZP_06750684.1| permease, YjgP/YjgQ family [Fusobacterium sp. 3_1_27] gi|294487110|gb|EFG34472.1| permease, YjgP/YjgQ family [Fusobacterium sp. 3_1_27] Length = 363 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 53/362 (14%), Positives = 117/362 (32%), Gaps = 11/362 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K ++YI + + FLM+ + + + + Q + I ++ + + L+P + Sbjct: 3 KKMDIYISKYFIKFFLMNIIGFMGVFLLAQTFKIIKYINQGKLAGGEIFDYIINLLPKMF 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + ++ M N E++ + +G + +++ L +A ++S+ +F N I Sbjct: 63 VETAPLSVLLAGLITISIMASNLEIVSLKTSGIRFLRIVRAPLIIAFVISLIVFFINNSI 122 Query: 122 EPKCRSTIKQLSA-----KAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 K + I +L T L KI++ + Sbjct: 123 YTKSLAKINFYRRGEVDESLKLPTTKENAFFINNTDGYLYLMGKINRETGVAENIEVVKF 182 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 +++ ++ +I A+S D D I ++ ++ S Sbjct: 183 ETQISKPKEIITAKSAKFDTDEDKWIFSNVNIYNVDTKETVTKTEYKSDLYKDDPSNFIR 242 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L N E Y +E KR + I I + A Sbjct: 243 ASAEDPRMLTIKELKKTIKEQKNI-GEDTRIYLAELAKRYSFPFASFIVAFIGLSA--SS 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMI 354 VR + + I + +G + S + N P + ++ I + + Sbjct: 300 KYVRGGRTTMNLVICVVAGYGYYLV-SGAFEAMSLNGIVNPFVASWIPNILYLIIGIYFM 358 Query: 355 KK 356 + Sbjct: 359 NR 360 >gi|294782105|ref|ZP_06747431.1| permease, YjgP/YjgQ family [Fusobacterium sp. 1_1_41FAA] gi|294480746|gb|EFG28521.1| permease, YjgP/YjgQ family [Fusobacterium sp. 1_1_41FAA] Length = 363 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 56/362 (15%), Positives = 119/362 (32%), Gaps = 11/362 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K ++YI + + FLM+ + + + + Q + I ++ + L+P + Sbjct: 3 KKLDIYISKYFIKYFLMNIIGFMGVFLLAQTFKIIKYINQGKLEGGEIFDYIVNLLPKMF 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + ++ M N E++ + +G + +++ L +A ++S+F+F N I Sbjct: 63 VETAPLSVLLAGLITISIMASNLEIVSLKTSGIRFLRIVRAPLIIAFIISLFVFFVNNSI 122 Query: 122 EPKCRSTIKQLSA-----KAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 K + I +L T L I++ I I Sbjct: 123 YTKSLAKINFYRKGEIDASLRLPKTKENAFFINNTDGYIYLMGNINRETGEAEKIEIVIY 182 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 D+ ++ +I AQSG D D + +L+ ++ + + + Sbjct: 183 DTEISKPVEIITAQSGKYDKDNKKWLLSGVNIYNVETKKTITKVAYDSDRFGEDPNNFIR 242 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L N E Y +E KR + I I + Sbjct: 243 AAAEDPRMLTIKELKKTIKEQKNI-GEDTRIYLAELAKRYSFPFASFIVAFIGLSV--SS 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMI 354 VR + + I + +G + S + N P + ++ I + + Sbjct: 300 KYVRGGRTTLNLVICVVAGYGYYLV-SGAFEAMSLNGILNPFISSWIPNILYFIIGMYFM 358 Query: 355 KK 356 + Sbjct: 359 NR 360 >gi|293449327|ref|ZP_06663748.1| hypothetical protein ECCG_02358 [Escherichia coli B088] gi|291322417|gb|EFE61846.1| hypothetical protein ECCG_02358 [Escherichia coli B088] Length = 359 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 49/360 (13%), Positives = 126/360 (35%), Gaps = 3/360 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ V+ + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVNPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + IL+ + + + I+ ++ S N + + Sbjct: 181 DLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLEILDNLAWQSTFTSMNLEELSM 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N N + YR ++L + + L+++ Sbjct: 241 PGNSFSVRQL-NHYINYLQETGQPSSEYRLALWEKLGHPILTLAMILLAVPFTFSAPRSP 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + + + + + + +++ P+ L L + L++ + + Sbjct: 300 --GMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVAALGLPMAFVLAALILVYLFDR 357 >gi|191169423|ref|ZP_03031162.1| putative permease, YjgP/YjgQ family [Escherichia coli B7A] gi|309794090|ref|ZP_07688515.1| conserved hypothetical protein [Escherichia coli MS 145-7] gi|190900537|gb|EDV60347.1| putative permease, YjgP/YjgQ family [Escherichia coli B7A] gi|308122497|gb|EFO59759.1| conserved hypothetical protein [Escherichia coli MS 145-7] Length = 359 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 49/360 (13%), Positives = 125/360 (34%), Gaps = 3/360 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I + G S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSMGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + IL+ + + + I+ ++ S N + + Sbjct: 181 DLSLESYIYARSATIKDDKTWILHGVNHKKWLNGKETLEILDNLAWQSTFTSMNLEELSM 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N N + YR ++L + + L+++ Sbjct: 241 PGNSFSVRQL-NHYINYLQETGQPSSEYRLALWEKLGHPILTLAMILLAVPFTFSAPRSP 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + + + + + + +++ P+ L L + L++ + + Sbjct: 300 --GMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVAALGLPMAFVLAALILVYLFDR 357 >gi|94266928|ref|ZP_01290581.1| permease YjgP/YjgQ [delta proteobacterium MLMS-1] gi|93452380|gb|EAT02999.1| permease YjgP/YjgQ [delta proteobacterium MLMS-1] Length = 359 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 45/342 (13%), Positives = 106/342 (30%), Gaps = 6/342 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y++ GR+ ++ I ++ +R++ + ++ IP + Sbjct: 1 MKLLDRYLITSFGRNLATVLGGLLAIYLLVDFFERVDSFLDAGLGTGGAVRYLLLKIPLI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + L +NR EL+ + G S +I+P+L A ++ S Sbjct: 61 IEQLLPVALLLAGIITLGLLNRRHELMALQAAGLSTRRIIRPLLLAAFACTLLGMASSQW 120 Query: 121 IEPKCRST-IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P S + + + + + + + F + Sbjct: 121 LLPPTMSELNRLWHQEVRQQENRGIERQGRIYYRGQEGIYSFRPAADSENRLADFSYLTW 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS--T 237 D + D + +L +G++ K+ D + F+ L + Sbjct: 181 DRDYRLAQLIFATRASWDGRKWLLEEGQLKEKANGDDDFVVDYFERRQLALPEEPADFFI 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +++ LS L + + R +++ + LI I + Sbjct: 241 PPYALSERALSTLFS--QATASADTPQRRQARLAIQHKISYIFLGLPLLLIGIPLLLAMS 298 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL 339 R + + + S + WG + P + Sbjct: 299 RGR-GRDLALAIPAASFLAFITWGLWSFGQSLAAAGQLPPFI 339 >gi|300718280|ref|YP_003743083.1| permease [Erwinia billingiae Eb661] gi|299064116|emb|CAX61236.1| Predicted permease [Erwinia billingiae Eb661] Length = 361 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 40/336 (11%), Positives = 106/336 (31%), Gaps = 2/336 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R I F + ++ + ++ ++ V+ L + +P Sbjct: 1 MTIFSRYLMRNIFIGFAAAAGLLIPLFTTFNLINELDDVAPGGYRWTQALLVVVMTLPRS 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + PF + L ++++ EL I G S + + + +++++ L + Sbjct: 61 LVDLAPFIALLGGIVGLGQLSKSLELTAIRTAGFSISRIARVMFCAGLVMTLTLGAVDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ A N + D ++ + + N GI I + Sbjct: 121 VAAPLQQRALQIKNVAMAKAESDSDAGNALWARSQDDFVTVQSLDNRNQPVGIEIFSWQP 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 T K Y + + L++ R + ++ + + + + L Sbjct: 181 DLTLKSYIFAQSATIAGKGMWTLHNVTEKRWDKQQETVNNLPEMQWHSLFSGEDLKRLTL 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 A + L + + + Y S ++ + + + L+++ Sbjct: 241 PAESFSARQLAD-YIVYLHKTGQPSLEYESALWQKAGRPILILAMILLAVPFTFSTPRAP 299 Query: 301 QRKKIHPIFISLSISF-GVFWGFSYIIHKIEQNPYY 335 + + + + V+ + N Sbjct: 300 GLGSRLALGVIVGLVTWIVYQIVLNLGILFSINAQL 335 >gi|254446878|ref|ZP_05060353.1| putative permease, YjgP/YjgQ family [Verrucomicrobiae bacterium DG1235] gi|198256303|gb|EDY80612.1| putative permease, YjgP/YjgQ family [Verrucomicrobiae bacterium DG1235] Length = 370 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 47/369 (12%), Positives = 117/369 (31%), Gaps = 17/369 (4%) Query: 5 ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 + Y+ ++F + + + + +I + S + +L L P+ L + Sbjct: 6 DRYVFTEWLKAFALVLSSMFGLLILFEIQDSFTDLVSYDATGGQILFYYAILAPSFLTVT 65 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P + L ++R E + + G S + + + ++L+S L+ + + P Sbjct: 66 LPASILVSILYALGQLHRANEFVALRAAGMSVFRVTRSIWLASLLISGGLWYLNSSLIPW 125 Query: 125 CRSTIKQLSAKAQLALTFSYLE----------ENLFFRLDDDLYIKISKYNPNNTLQGIF 174 QL + L+ R + +I + Sbjct: 126 SVEQSNQLITTLRQDSEAKILDSDEIGVVEGLAFDNRRENRMWFINRYSEYKSQAFGISV 185 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + + + + A+ G D D L DG P + F+ + + + Sbjct: 186 SIMDEERREVRRVMARYGYFDEDLGYWTLFDGRERLNDPDTGRERWPPFERLDAKDLTDD 245 Query: 235 SSTI---VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 + + + D + L + + Y + +I I+I Sbjct: 246 PTLMLLFGKRPKDLSFFQLRRITDSFTQEDNPNVLAYEVRLQALMASAASCLIVAGIAIP 305 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 A + + S+ + F VF+ F+ +++ + P + ++ ++ I L Sbjct: 306 FAVSGV---RTNPAVGVTKSIGL-FFVFYIFTSVLNAFGREGALSPEMAAWIPMVAMILL 361 Query: 352 LMIKKKYTK 360 + + + Sbjct: 362 AYVLMRRVR 370 >gi|99080789|ref|YP_612943.1| permease YjgP/YjgQ [Ruegeria sp. TM1040] gi|99037069|gb|ABF63681.1| permease YjgP/YjgQ [Ruegeria sp. TM1040] Length = 368 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 48/361 (13%), Positives = 116/361 (32%), Gaps = 13/361 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 +LY R + F++ ++ + +I + ++ + LL+++ P Sbjct: 2 ILDLYYARRFLQWFMVIAAVLMSLVMLIDLSEQFRRFDAQDLRFGQLLELTLLNAPAAFS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + T + M R++EL++ G S I + P + +A++L + N I Sbjct: 62 EFLPLIMILTTIVLFVGMARSSELVVTRAIGRSGIRALVPPVVVALVLGGLAVSTLNPIV 121 Query: 123 PKCRSTIKQLSAKAQLALTFS---------YLEENLFFRLDDDLYIKISKYNPNNTLQGI 173 + + LS + + +L + N L + Sbjct: 122 AATTNRFETLSESYRQTGGPAAVSLSGEGLWLRQGGQNGQSVIHAANYRGDAENLYLYDV 181 Query: 174 FIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 I+ + + ++ + ++ + S ++ L T Sbjct: 182 SILTYAPDGGPTRRTVAAEARLEGDDWVLRDAKVWQLILGVNPERSAKRYDELRLPTTLT 241 Query: 234 NSSTIVLKANDQNLS-FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 N + +S + L + + ++ L + LF V L+ Sbjct: 242 NERIRDTLGYAEGISIYDLPQTIQSLSEAGFSTTRFQVWLQVELARPLFLVAMVLVGAAF 301 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 R + S+ + F +++ ++ + +N +L + ++SI L Sbjct: 302 --TMRHTRLGGTGVAVLTSVLLGFALYFVHNFA-RILGENGQIPILLAAWAPPVASILLT 358 Query: 353 M 353 M Sbjct: 359 M 359 >gi|153209377|ref|ZP_01947372.1| putative permease [Coxiella burnetii 'MSU Goat Q177'] gi|165919052|ref|ZP_02219138.1| putative permease [Coxiella burnetii RSA 334] gi|212218294|ref|YP_002305081.1| hypothetical membrane spanning protein [Coxiella burnetii CbuK_Q154] gi|120575377|gb|EAX32001.1| putative permease [Coxiella burnetii 'MSU Goat Q177'] gi|165917247|gb|EDR35851.1| putative permease [Coxiella burnetii RSA 334] gi|212012556|gb|ACJ19936.1| hypothetical membrane spanning protein [Coxiella burnetii CbuK_Q154] Length = 355 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 48/358 (13%), Positives = 112/358 (31%), Gaps = 4/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI I + + L ++ I ++ + +++ + S L +P+ Sbjct: 1 MPLLNRYIRNAIITATALVMLVLLGIEMFMEFIGQLSQIGSVHYGLGQAFLYVLTQLPSD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L + ++EL+++ G S + V+ A+L+ + + + Sbjct: 61 LYQLFPMAGFLGCLIGLGRLASSSELMVMRTAGVSIAGVTWAVVKAALLMMVAMTFIGEV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P+ ++ ++ A +++ S N + + Sbjct: 121 IAPQLGASGEETKLTALSKAVGYKALGDVWLHGAQSFIHIGSVDAKNKISEVSQFFINNK 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 Q YA G IL + + + +P + T+ + Sbjct: 181 HQLLSAVYAPKGEYVKG--HWILYNVKQTQFTPNRTTEKKIAKFPLTIVFNPDHLQQGRK 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + Q++ L + Y F +R Q L V+ + + Sbjct: 239 MVDRQSIVGLYH-TIRYRQQAGLQTSRYVFAFWQRFIQPLTTVVMICLGVPFIFGSLRQA 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSY-IIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I + +F + F + P + ++ LF + + LL ++ Sbjct: 298 SMGLRILTGIVIGFAFYMLNQFFGPFAMVYQIPPIFAALMPTVLFAVGCVILLRYSRR 355 >gi|114331101|ref|YP_747323.1| permease YjgP/YjgQ family protein [Nitrosomonas eutropha C91] gi|114308115|gb|ABI59358.1| permease YjgP/YjgQ family protein [Nitrosomonas eutropha C91] Length = 352 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 41/353 (11%), Positives = 113/353 (32%), Gaps = 2/353 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YI + +++ + ++ + +L +++ V T + + L+P Sbjct: 1 MKICYRYIALQVLTGMIIATVVLLPLFSFFDLLDQLDDVGKGTYTTRDAFLYTAMLMPRR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + PF + T L + + EL+ + G S + + + + L E + Sbjct: 61 FIQIAPFIALLGTVGALGGLAVSLELVAMRVAGFSPLMISLAPIGIGGGLITSTIALEYL 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ + + L + + + ++ ++I + I ++ Sbjct: 121 VAPQFQQQ-AIVLRAVALEQSAELGKGLGIWTRNEQNILRIGEMLHKGRAIDIEVMHFDK 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + D+ L+D V +P + + + +T+ Sbjct: 180 QGLMTAHIHAQYADIFDKSMWKLHDVTVRMFAPDRIFSRKVHALQWHSFLGPEDIATLTK 239 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 LL+ + + + Y +++ + + LI+I Sbjct: 240 PPESLTPLELLH-HAEFLKMTGQKADAYVMALWRKVGSVVMTIAMILIAIPFIFGSVREG 298 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 K+ + + + + I + NP + I + + + + L+ Sbjct: 299 LGGKLVLASLMGISIYLLDQIIANIGLVFQLNPIVVSIAPGSILIVIAAYWLL 351 >gi|325578600|ref|ZP_08148700.1| inner membrane protein YjgP [Haemophilus parainfluenzae ATCC 33392] gi|325159836|gb|EGC71966.1| inner membrane protein YjgP [Haemophilus parainfluenzae ATCC 33392] Length = 363 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 44/357 (12%), Positives = 122/357 (34%), Gaps = 19/357 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + +S + ++ I + Q+++ + ++ +++ + G +PT+ Sbjct: 2 ILTRYLTKEVFKSQIAILFILLLIFFSQQLVRVLGSAANGKVPADLVFSLLGLGMPTMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P C + + +E+ ++ G + L++ L L++ + + + Sbjct: 62 LMLPLCLFIAILLTFGRLYAESEITVMRACGVGQRILVRVALILSLFTAGLAAYNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + A+ T L F ++ ++ N + +++ + Sbjct: 122 PWAIQKQAAIVEDAKANPTMGALTSGQFMSTSNNNFVLFIDKINGNQISDVYLFQMKAKG 181 Query: 183 --THKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G + Q + L + + + D I F Y ++T Sbjct: 182 QTKPSVVTAEKGELKALPNGDQVLNLQNTLRVEGTSVLPDFRITHFDDYQAYLGHQETNT 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +A + + LL + ++E H R+T L + LI++ Sbjct: 242 ESDEAAELSFEQLL----------KDKSSAAKAELHWRITLILAVPLMALIAV---PMSK 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-PYYIPILYLFLFCISSIFLLM 353 + ++ + I +L + F S ++ L + +++ Sbjct: 289 VNPRQGRFAKILPALLLYLIYFLLQSSFKSAGGAGKLDAGLLMPLVNIAFLILGIVL 345 >gi|260582802|ref|ZP_05850588.1| permease [Haemophilus influenzae NT127] gi|260094128|gb|EEW78030.1| permease [Haemophilus influenzae NT127] gi|309972900|gb|ADO96101.1| Lipopolysaccharide export permease, LptF [Haemophilus influenzae R2846] Length = 367 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 49/354 (13%), Positives = 129/354 (36%), Gaps = 15/354 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + +S + L ++ I + Q ++ + ++ +++ + G +PT+ Sbjct: 2 ILIRYLIKEVFKSQIAILLILLLIFFSQQFVRVLGAAANGNVPADLVFSLLGLGMPTMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P C + + +E+ ++ G + L+K L +++L + + + Sbjct: 62 LMLPLCLFIAILLTFGRLYAESEITVMRACGVGQRILVKVALIMSLLTAGIAAYNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + A+ T L F +++ + +N ++ +++ + Sbjct: 122 PWAIQKQVNMVEDAKANPTVGVLSSGQFISTNNNNVVLFIDKIKDNQIRNVYLFQMTPQK 181 Query: 183 --THKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G + Q + L + + + D I F Y ++ Sbjct: 182 QTKPSVITAEKGELIALPNGDQVLNLKNTKRVEGTSALPDFRITHFDEYQAYLGYQSAEN 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + LS L++ + ++ ++E H R+T L + LI++ + Sbjct: 242 TNDEVAELTLSQLIDLDSSSA----------KAELHWRITLILAVPLMALIAVPLSRVNP 291 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + KI P + I F + F + + L F + ++ L Sbjct: 292 RQGRFAKILPALLLYLIYFLLQSSFKSAGSAGKLEAELLMPLVNIGFFLLAVVL 345 >gi|223938399|ref|ZP_03630293.1| permease YjgP/YjgQ family protein [bacterium Ellin514] gi|223892968|gb|EEF59435.1| permease YjgP/YjgQ family protein [bacterium Ellin514] Length = 383 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 69/382 (18%), Positives = 137/382 (35%), Gaps = 30/382 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQIL-QRINLVSSSTESLNILLKISGYLIPT 59 MK Y++R + + +M+ F+ + L + + L+ + +L +++ G LIP Sbjct: 1 MKILHTYLIRQVLATLMMTVAVFTFVLLLGNGLKEILVLIINRQATLGGVIQAFGLLIPF 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 VL P V + + EL + ++G S ++LI P+L L+++L Sbjct: 61 VLVFALPMGMLTAALLVFGRFSADQELTAVKSSGVSLLSLITPILGLSLVLCGVSAAINM 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 I P+CR L + + + L +++F + I + + N Sbjct: 121 EIAPRCRIAYLDLRDEMVGKVAGAALPDSIFVKDFPGFLIYVGASDGKNLTDIHICQLDE 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + + A G + L + S + S L + NS++ Sbjct: 181 NDKVKTMTDAPKGLLQRSGNQTSLELFDARIFDVQSGSWAYPGIVSQDLSSIKTNSTSKN 240 Query: 240 LKANDQNLSFLLNPNP-----------------------NNPNYRPELLETYRSEFHKRL 276 + D L N N + ++ R + H+++ Sbjct: 241 IHIGDMTFRQLQNELQVVENEFAVPEKAGSKAELQQRRDILANKKKDVTMPIRVQMHRQV 300 Query: 277 TQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 F LI I +R+ I +SL++ V++ F + E PY Sbjct: 301 AFSFACFGFTLIGIPLGI---QAHRRETNVGIAMSLALV-LVYYSFIILGQSFEGRPYLA 356 Query: 337 P--ILYLFLFCISSIFLLMIKK 356 P IL++ F +I +M+ + Sbjct: 357 PHLILWIPNFLFQAIGAVMLWR 378 >gi|83644757|ref|YP_433192.1| permease [Hahella chejuensis KCTC 2396] gi|83632800|gb|ABC28767.1| predicted Permease [Hahella chejuensis KCTC 2396] Length = 353 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 45/357 (12%), Positives = 120/357 (33%), Gaps = 5/357 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + YI+ + + L+ L ++ + V + ++ + + ++L +K + +P Sbjct: 1 MRRIDRYIVATVASAMLLVLLVVLSLDLVFAFIAEMDELKNDYQTL-QAMKYIIFTVPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L + N+EL +I G S + ++ + A+ + + + Sbjct: 60 IYDYLPLAAFIGCLVGLGVLANNSELTVIRAAGVSVVRVVWSTMKPALAVVVVGILVGEF 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ I Q + + +R + ++++ + P L G+ + + D Sbjct: 120 VAPQT-ERIAQTQKALEQGAAENVASSAGMWRREGNVFMHFNAVEPKGVLHGVSLFEFND 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + +I +L D E + + + + +++ Sbjct: 179 ERRMVRSTFAKRAIYQGDH-WLLQDIERTEIKDDGSHVQTFDSLRWNVSLSPSILEVLII 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K ++ L N + +Y F K++ Q + + L++I Sbjct: 238 KPEYLSIKGLY-TYANYQEEQGLDANSYLMAFWKKVLQPVATSVLVLVAISFIFGPLRSV 296 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKI-EQNPYYIPILYLFLFCISSIFLLMIKK 356 I + + F + NP + + + + + LL + Sbjct: 297 TMGFRVFCGIIIGLLFKYMQDLLGPASLVFGFNPVIATLAPICICALLGVVLLRRVR 353 >gi|237718555|ref|ZP_04549036.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|293373071|ref|ZP_06619439.1| putative membrane protein [Bacteroides ovatus SD CMC 3f] gi|299145713|ref|ZP_07038781.1| putative membrane protein [Bacteroides sp. 3_1_23] gi|229452015|gb|EEO57806.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|292631957|gb|EFF50567.1| putative membrane protein [Bacteroides ovatus SD CMC 3f] gi|298516204|gb|EFI40085.1| putative membrane protein [Bacteroides sp. 3_1_23] Length = 365 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 44/362 (12%), Positives = 120/362 (33%), Gaps = 7/362 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPTV 60 K + YI++ +++ + I+ IA V ++++ + + I+ + IP Sbjct: 8 KRLDWYIIKKFLGTYVFAIALIISIAVVFDFNEKMDKLMEHEAPWDKIIFEYYMNFIPYF 67 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +P + + + N+E++ + +TG S +++P + A ++++ F + Sbjct: 68 SNLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMMRPYMISAAIIALVTFTLSSY 127 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + PK T + + + + + N T + D Sbjct: 128 VIPKGSVTRLNFEDRYIKPKKQNSVSNVQLEVDSGVIAYIDNYNNAMKTGNRFSLDKFVD 187 Query: 181 TQTHKIYYAQSGSIDLDR-QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + A+ + D ++D V + + I+ + E ++ + Sbjct: 188 KKLVSHLTARRITYDTTTVHKWTIHDYMVRELDGLKEKITKGDRIDSIINMEPSDFLIMK 247 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + L + ++ + E+HKR+ I +I + + Sbjct: 248 NQQEMLTSPELSDYIVKQKRRGFANIKEFEIEYHKRIAMSFASFILTIIGVSL----SSR 303 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF-CISSIFLLMIKKKY 358 + + + + F I N P + +++ + + + +K Sbjct: 304 KTKGGMGLHLGIGLGLSFSYILFQTITSTFAVNGNVPPAVAVWIPNILYAGIAFFLYQKA 363 Query: 359 TK 360 K Sbjct: 364 PK 365 >gi|94495767|ref|ZP_01302347.1| permease YjgP/YjgQ [Sphingomonas sp. SKA58] gi|94425155|gb|EAT10176.1| permease YjgP/YjgQ [Sphingomonas sp. SKA58] Length = 366 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 48/358 (13%), Positives = 121/358 (33%), Gaps = 7/358 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTV 60 + LY+ R +V + + +L + + S L G P + Sbjct: 9 RQISLYMARLFLTRTFAVLAMLVVVLQTLDLLGNSGDILAYPGNSDAQLWHYVGLRAPQI 68 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + PF + T +L ++N+N+E++ + G S ++ P++ A+ +SI F+ Sbjct: 69 IATFLPFSVLLGTLVMLATLNQNSEIISMKAAGLSAHQILAPLVLAALGVSIISFVFNER 128 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIK---ISKYNPNNTLQGIFIVD 177 I + + + A + ++ + D + + ++ L+ + I + Sbjct: 129 IVVRSTAALSAWEAVDYGPVPPDSGVKSNPWVRDGNNLVNAAIVAGRGTAVQLRQVEIYN 188 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + I A G D+ ++ +L + +S + + + Sbjct: 189 RINNRLTTIVQAPKGHYDVASKSWVLEGA--RQFDVARGTVSNIGTVRFGRDIRPDQFTL 246 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + L + + +L+ L ++ ++ VAA A Sbjct: 247 ARVDPDALTFHEL-EAAIGDLRDAGRPTKELEGSLWHKLSGPLSALLMPILGSVAAFGLA 305 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 Q + ++L ++ V FS + + P + F + ++ + Sbjct: 306 RSGQLFMRAVLGMALGFAYFVADNFSLAMGNLGAYPPVLAAWAPFFLFLLVGETVLFR 363 >gi|293412357|ref|ZP_06655080.1| predicted protein [Escherichia coli B354] gi|291469128|gb|EFF11619.1| predicted protein [Escherichia coli B354] Length = 359 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 49/360 (13%), Positives = 123/360 (34%), Gaps = 3/360 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + IL+ + + + ++ S + + + Sbjct: 181 DLSLESYIFARSATIEDDKTWILHGVNHKKWLNGKETLETSDNLAWQSAFTSMDLEELSM 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + YR ++L Q + + L+++ Sbjct: 241 PGNTFSVRQL-NHYIHYLQETGQPSSEYRLALWEKLGQPILTLAMILLAVPFTFSAPRSP 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + + + + + +++ P+ L L + L + Y + Sbjct: 300 --GMGSRLAVGVIAGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYWYDR 357 >gi|255320990|ref|ZP_05362163.1| permease YjgP/YjgQ family protein [Acinetobacter radioresistens SK82] gi|262379920|ref|ZP_06073075.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] gi|255301954|gb|EET81198.1| permease YjgP/YjgQ family protein [Acinetobacter radioresistens SK82] gi|262298114|gb|EEY86028.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] Length = 356 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 47/356 (13%), Positives = 113/356 (31%), Gaps = 4/356 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + ++ + + L + + + + + L + + + L + P + Sbjct: 5 RIVAKHVTKTTALAMLGATVVLSILQVLFTYLGELGNLKE-GYNAWQALLYVLWSAPRYI 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ N+EL+I+ G S ++ V+ A+LL I F + Sbjct: 64 YEILPISALIGAVLGLGTLASNSELIIMRAAGISLWRIVGWVMRSALLLVILSFALSEWV 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + + +A + +Q + +D Sbjct: 124 IPVTNERAESVKSHRSVAQLGEVKGYWSREGQRFIYIDYANSQGNLRNVQ--VVDFDQDY 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + + A SG + D Q + N +V + I + + L + + L Sbjct: 182 RLQALLNADSGQFEQDGQWRLQNSVQVDILEAGNAVQHIAEQQPLALALKPKYVHMVTLD 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 D + S L++ Y ++ +TY+ F ++L + LI+ + Sbjct: 242 PEDLSPSQLISFMRYMEEY-SQVPKTYQLAFWQKLASPFALITLVLIACSFIFGPLRQQS 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I + + + F F + + + L L+ + + Sbjct: 301 MGFRLVIALFIGLGFYYLQDFLGYASLVYSPSPVWFVFFPILLMFIGGSYLLYRAR 356 >gi|226943298|ref|YP_002798371.1| YjgP/YjgQ family permease [Azotobacter vinelandii DJ] gi|226718225|gb|ACO77396.1| permease YjgP/YjgQ family [Azotobacter vinelandii DJ] Length = 376 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 45/353 (12%), Positives = 118/353 (33%), Gaps = 26/353 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + + ++ I + ++ + + +LL+I Y +P+ L Sbjct: 5 IIPRYLSRELLMTLGAVSAVLLAIIMSGRFIKYLAQAAQGLLDPGVLLQIMLYRVPSFLE 64 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + ++E+ ++ TG S L L AI ++ + + Sbjct: 65 LILPLGLFLGILLAYGRLYLDSEMTVLAATGMSPQRLAVYTLVPAIPVAALVAWMSLGLA 124 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEE--NLFFRLDDDLYIKISKYNPNNTLQGIFI---VD 177 P+ ++QL + + F L + + + L +FI Sbjct: 125 PQGIRLVEQLLNEQKALTEFDTLVPGRFQTMKDGSRVTYVEDLTDDRTELSRVFISEKQM 184 Query: 178 SRDTQTHKIYYAQSGSIDLDR------QAIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 SRD + + +IL +G + +P D ++++ +Y + Sbjct: 185 SRDGGKERGIAVLVAEGGRQEVQADGSRYLILQNGYRYDGNPGEADYRVIRYDTYGVLLA 244 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S+ + + S L+ +++E RL+ L + ++ Sbjct: 245 RPAVSSEINEREAIPTSELI----------GSDQPRHQAELQWRLSLPLLVFVVA---VL 291 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLF 342 A ++ + + ++ + + ++ + P I + ++ Sbjct: 292 AVPLARANPRQGRFLKLLPAILLYMAYLATLIAVRGELDKGKIPMLIGLWWVH 344 >gi|330751983|emb|CBL80496.1| predicted permease YjgP/YjgQ [uncultured Polaribacter sp.] Length = 363 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 58/363 (15%), Positives = 111/363 (30%), Gaps = 6/363 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLK-ISGYLIP 58 MK + YIL+ +FL + L ++ IA I + ++I+ LN +L I Sbjct: 1 MKIIDWYILKRFLVTFLFTLLILIPIAIAIDVSEKIDNFLEHPNLGLNEVLNDYYLNFII 60 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 P + + ++ NTE++ I N S + P A L++I Sbjct: 61 YYTNTFMPLALFIAVILFTSKLSNNTEIIAITNAKVSFTRFMYPYFIGATLITILSLGMN 120 Query: 119 NIIEPKC---RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF- 174 + + P R ++ + +L D YI I +N N + F Sbjct: 121 HYVVPNSSKVRKAFEKKYINNSKQKNALKYVSDFSLQLTDSTYIFIRSFNTENNVGNDFN 180 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + A S + LN I + Sbjct: 181 SETYNGLELISKLSADRLSYNNKDSIFTLNRWRKRLVYKDRDSIFSGSKMDTVFNFAPKD 240 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 A + + L+ + + L Y E +KR + + I +I++ A Sbjct: 241 LIYKSAFAQEMPSNELVAFINISKKRGVKNLNAYLVELYKRSSLPIASYILTIIAVALAF 300 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 ++ + + + + N + LF + +I+L Sbjct: 301 RKRRGGTGVNLAVGVGIMFLYVFFMKVGEVLGSVAGVNSLAYVWIPNILFGLIAIYLYFH 360 Query: 355 KKK 357 +K Sbjct: 361 ARK 363 >gi|320195129|gb|EFW69758.1| Permease Ygh-P2, YjgP/YjgQ family [Escherichia coli WV_060327] Length = 359 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 49/354 (13%), Positives = 123/354 (34%), Gaps = 3/354 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDNDIIGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + IL+ + + + ++ S N + + Sbjct: 181 DLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLETSDNLAWQSTFTSMNLEELSM 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + YR ++L Q + + L+++ Sbjct: 241 PGNTFSVRQL-NHYIHYLQETGQPSSEYRLALWEKLGQPILTLAMILLAVPFTFSAPRSP 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + + + + + + +++ P+ L L + L + Sbjct: 300 --GMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSL 351 >gi|124009520|ref|ZP_01694195.1| putative permease, YjgP/YjgQ family [Microscilla marina ATCC 23134] gi|123984866|gb|EAY24834.1| putative permease, YjgP/YjgQ family [Microscilla marina ATCC 23134] Length = 371 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 50/374 (13%), Positives = 132/374 (35%), Gaps = 18/374 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILL-KISGYLIPT 59 +K + YIL+ +F + ++ I +I I ++I + +++ + K IP Sbjct: 2 LKRLDKYILKKFLVTFFFVVIILISIIVIIDITEKIGDFNKMDQTVWQIFTKYYLNFIPY 61 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++P + T V + +TE++ I ++G S ++ P L + L+++ F Sbjct: 62 WANSLSPILIFIATVFVTARLATHTEIIAILSSGVSFKRMLVPYLLGSSLIAVLTFYLIG 121 Query: 120 IIEPKCR---------STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTL 170 + PK + + + D+ K+ N Sbjct: 122 WVIPKANRVRLKFENTHIKDKFYFTDRNVHLKIAPNTFAYIESYDNTSHVGYKFTLENIS 181 Query: 171 QGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI---SKDISIMKFKSYT 227 + + + + + D DR+ ++ + ++ + + I+ + Sbjct: 182 GFEYDGKRQQKKLNSKVECRRILWDKDRKKWVMENYKITEFNRGDSLNYKITYGQSLDTL 241 Query: 228 LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGL 287 + + ++ + + L LETY E ++R+ +I + Sbjct: 242 MNLKPSDFESKYMFNEQLTSDQLEAYIAELKQRGVGKLETYLVERYERMAYPFAVIILTV 301 Query: 288 ISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF-LFCI 346 I ++ + + I + ++F ++ + I +N P++ + + Sbjct: 302 IGVIV---SSRKTREGAGLQIAVGFGLAF-IYVMLIMVSRSIGKNGELPPLVAAWMPNIL 357 Query: 347 SSIFLLMIKKKYTK 360 ++ L++ K+ K Sbjct: 358 FALIGLIMYKRVPK 371 >gi|218701754|ref|YP_002409383.1| hypothetical protein ECIAI39_3474 [Escherichia coli IAI39] gi|227887686|ref|ZP_04005491.1| inner membrane protein [Escherichia coli 83972] gi|301019929|ref|ZP_07184064.1| conserved hypothetical protein [Escherichia coli MS 196-1] gi|218371740|emb|CAR19591.1| conserved hypothetical protein; putative membrane protein [Escherichia coli IAI39] gi|227835082|gb|EEJ45548.1| inner membrane protein [Escherichia coli 83972] gi|299882027|gb|EFI90238.1| conserved hypothetical protein [Escherichia coli MS 196-1] gi|307555074|gb|ADN47849.1| putative permease [Escherichia coli ABU 83972] Length = 359 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 49/360 (13%), Positives = 124/360 (34%), Gaps = 3/360 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + IL+ + + + ++ S + + + Sbjct: 181 DLSLESYIFARSASIEDDKTWILHGVNHKKWLNGKETLETSDNLAWQSAFTSMDLEELSM 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + YR ++L Q + + L+++ Sbjct: 241 PGNTFSVRQL-NHYIHYLQETGQPSSEYRLALWEKLGQPILTLAMILLAVPFTFSAPRSP 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + + + + + + +++ P+ L L + L + Y + Sbjct: 300 --GMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYWYDR 357 >gi|148827127|ref|YP_001291880.1| 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [Haemophilus influenzae PittGG] gi|148718369|gb|ABQ99496.1| 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [Haemophilus influenzae PittGG] Length = 367 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 49/354 (13%), Positives = 129/354 (36%), Gaps = 15/354 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + +S + L ++ I + Q ++ + ++ +++ + G +PT+ Sbjct: 2 ILIRYLIKEVFKSQIAILLILLLIFFSQQFVRVLGAAANGNVPADLVFSLLGLGMPTMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P C + + +E+ ++ G + L+K L +++L + + + Sbjct: 62 LMLPLCLFIAILLTFGRLYAESEITVMRACGVGQQILVKVALIMSLLTAGIAAYNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + A+ T L F +++ + +N ++ +++ + Sbjct: 122 PWAIQKQVNMVEDAKANPTVGVLSSGQFISTNNNNVVLFIDKIKDNQIRNVYLFQMTPQK 181 Query: 183 --THKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G + Q + L + + + D I F Y ++ Sbjct: 182 QTKPSVITAEKGELIALPNGDQVLNLKNTKRVEGTSALPDFRITHFDEYQAYLGYQSAEN 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + LS L++ + ++ ++E H R+T L + LI++ + Sbjct: 242 TNDEVAELTLSQLIDLDSSSA----------KAELHWRITLILAVPLMALIAVPLSRVNP 291 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + KI P + I F + F + + L F + ++ L Sbjct: 292 RQGRFAKILPALLLYLIYFLLQSSFKSAGSAGKLEAELLMPLVNIGFFLLAVVL 345 >gi|68250307|ref|YP_249419.1| permease [Haemophilus influenzae 86-028NP] gi|145633639|ref|ZP_01789366.1| molybdate ABC transporter permease protein [Haemophilus influenzae 3655] gi|145639139|ref|ZP_01794746.1| predicted permease [Haemophilus influenzae PittII] gi|148825753|ref|YP_001290506.1| permease [Haemophilus influenzae PittEE] gi|229847325|ref|ZP_04467427.1| predicted permease [Haemophilus influenzae 7P49H1] gi|260581045|ref|ZP_05848867.1| permease [Haemophilus influenzae RdAW] gi|68058506|gb|AAX88759.1| predicted permease [Haemophilus influenzae 86-028NP] gi|144985516|gb|EDJ92332.1| molybdate ABC transporter permease protein [Haemophilus influenzae 3655] gi|145271701|gb|EDK11611.1| predicted permease [Haemophilus influenzae PittII] gi|148715913|gb|ABQ98123.1| predicted permease [Haemophilus influenzae PittEE] gi|229809750|gb|EEP45474.1| predicted permease [Haemophilus influenzae 7P49H1] gi|260092285|gb|EEW76226.1| permease [Haemophilus influenzae RdAW] gi|301170459|emb|CBW30066.1| conserved inner membrane protein [Haemophilus influenzae 10810] gi|309750720|gb|ADO80704.1| Lipopolysaccharide export permease, LptF [Haemophilus influenzae R2866] Length = 367 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 49/354 (13%), Positives = 129/354 (36%), Gaps = 15/354 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + +S + L ++ I + Q ++ + ++ +++ + G +PT+ Sbjct: 2 ILIRYLIKEVFKSQIAILLILLLIFFSQQFVRVLGAAANGNVPADLVFSLLGLGMPTMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P C + + +E+ ++ G + L+K L +++L + + + Sbjct: 62 LMLPLCLFIAILLTFGRLYAESEITVMRACGVGQRILVKVALIMSLLTAGIAAYNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + A+ T L F +++ + +N ++ +++ + Sbjct: 122 PWAIQKQVNMVEDAKANPTVGVLSSGQFISTNNNNVVLFIDKIKDNQIRNVYLFQMTPQK 181 Query: 183 --THKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G + Q + L + + + D I F Y ++ Sbjct: 182 QTKPSVITAEKGELIALPNGDQVLNLKNTKRVEGTSALPDFRITHFDEYHAYLGYQSAEN 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + LS L++ + ++ ++E H R+T L + LI++ + Sbjct: 242 TNDEVAELTLSQLIDLDSSSA----------KAELHWRITLILAVPLMALIAVPLSRVNP 291 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + KI P + I F + F + + L F + ++ L Sbjct: 292 RQGRFAKILPALLLYLIYFLLQSSFKSAGSAGKLEAELLMPLVNIGFFLLAVVL 345 >gi|323173776|gb|EFZ59405.1| hypothetical protein ECLT68_2094 [Escherichia coli LT-68] Length = 359 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 48/360 (13%), Positives = 123/360 (34%), Gaps = 3/360 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I + G S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSMGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + IL+ + + + ++ S + + + Sbjct: 181 DLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLETSDNLAWQSAFTSMDLDELSM 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + YR ++L Q + + L+++ Sbjct: 241 PGNTFSVRQL-NHYIHYLQETGQPSSEYRLALWEKLGQPILTLAMILLAVPFTFSAPRSP 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + + + + + + +++ P+ L L + L + Y + Sbjct: 300 --GMGSRLAVGVIVGLLTWISYQIMVNLGLLFVLSAPVTALGLPIAFVLVALSLVYWYDR 357 >gi|306816678|ref|ZP_07450810.1| hypothetical protein ECNC101_08669 [Escherichia coli NC101] gi|331659261|ref|ZP_08360203.1| putative permease [Escherichia coli TA206] gi|305850243|gb|EFM50702.1| hypothetical protein ECNC101_08669 [Escherichia coli NC101] gi|315297644|gb|EFU56921.1| conserved hypothetical protein [Escherichia coli MS 16-3] gi|331053843|gb|EGI25872.1| putative permease [Escherichia coli TA206] Length = 359 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 49/354 (13%), Positives = 123/354 (34%), Gaps = 3/354 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDNDIIGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + IL+ + + + ++ S N + + Sbjct: 181 DLSLESYIYARSATIKDDKTWILHGVNHKKWLNGKETLETSDNLAWQSTFTSMNLEELSM 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + YR ++L Q + + L+++ Sbjct: 241 PGNTFSVRQL-NHYIHYLQETGQPSSEYRLALWEKLGQPILTLAMILLAVPFTFSAPRSP 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + + + + + + +++ P+ L L + L + Sbjct: 300 --GMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSL 351 >gi|262068069|ref|ZP_06027681.1| permease, YjgP/YjgQ family [Fusobacterium periodonticum ATCC 33693] gi|291378155|gb|EFE85673.1| permease, YjgP/YjgQ family [Fusobacterium periodonticum ATCC 33693] Length = 363 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 57/362 (15%), Positives = 123/362 (33%), Gaps = 11/362 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K ++YI + + FLM+ + + + + Q + I ++ + L+P + Sbjct: 3 KKLDIYISKYFIKYFLMNIIGFMGVFLLAQTFKIIKYINQGKLEGGEIFDYILNLLPKMF 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + ++ M N E++ + +G + +++ L +A ++S+F+F N I Sbjct: 63 VETAPLSVLLAGLITISIMASNLEIVSLKTSGIRFLRIVRAPLIIAFVISLFVFFVNNSI 122 Query: 122 EPKCRSTIKQLSA-----KAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 K + I +L T L I++ I + Sbjct: 123 YTKSLAKINFYRKGEIDASLRLPKTKENAFFINNNDGYIYLMGNINRETGLAEKVEIVVY 182 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 D+ ++ +I AQSG D + + +L+ ++ I+ +++ S + N Sbjct: 183 DTEISKPVEIITAQSGKYDKENKKWLLSGVNIYNVETKKS-ITKVEYDSDRFGEDPNNFI 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L E Y SE KR + I I + Sbjct: 242 RAAAEDPRMLTIKELKKTIKEQKNIGEDTRIYLSELAKRYSFPFASFIVAFIGLSV--SS 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMI 354 VR + + I + +G + S + N P + ++ I + + Sbjct: 300 KYVRGGRTTINLVICVVAGYGYYLV-SGAFEAMSLNGILNPFISSWIPNILYFIIGMYFM 358 Query: 355 KK 356 + Sbjct: 359 NR 360 >gi|330938933|gb|EGH42432.1| permease YjgP/YjgQ [Pseudomonas syringae pv. pisi str. 1704B] Length = 302 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 43/299 (14%), Positives = 94/299 (31%), Gaps = 4/299 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + + L I+ + + + + + S T +L L P Sbjct: 1 MVKLDRYIGKSVLLAILAVLGIILGLVSMFAFIDEMRDI-SDTYTLTDALSFVMLTAPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ ++EL I+ G S ++ V+ +LL I + Sbjct: 60 VYDTLPMAALIGCLIGLGTLASSSELTIMRAAGVSIGRIVWAVMKPMLLLMIAGVLVGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + AQ + L+ R D+ + L Sbjct: 120 VAPYAENQAQAARSLAQGSGDAQSARHGLWHRQGDEFIHINTVQPNGLMLGVTRYHFDDQ 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 +A+ + D L D + S ++ + + + ST+++ Sbjct: 180 RHMLTSSFAKEANFKTD--YWELKDVTTTHFNDGSTEVVNTPVERWDVALSPQLLSTVIM 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 ++S L + + Y F ++ Q V L++I Sbjct: 238 PPESLSISGL-WSYAHYLADQGLSNGRYWLAFWTKVLQPAVTVALVLMAISFIFGPLRS 295 >gi|298372644|ref|ZP_06982634.1| membrane protein [Bacteroidetes oral taxon 274 str. F0058] gi|298275548|gb|EFI17099.1| membrane protein [Bacteroidetes oral taxon 274 str. F0058] Length = 389 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 50/354 (14%), Positives = 116/354 (32%), Gaps = 6/354 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPTV 60 + YI+R +F M + I+ I+ V ++++ S + + I+ IP Sbjct: 34 SILDRYIMRKYLSTFFMCIIMIISISVVFDYAEKVDDFSENNAPMRAIIFDYYFNFIPYF 93 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + TP + + M NTE++ + +TG S L+ P A L+ + F+ Sbjct: 94 ANLFTPLFAFISVIFFTSKMAYNTEIIAMLSTGMSFKRLLVPYFMSATLIGLMSFLLGGF 153 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + S L N+ L+ + +Y N F ++ + Sbjct: 154 VIPASN-KPRLDFEDKYYRKFRSELVTNIQLELEPGVVAYFERYEENINRGYNFSLEKFE 212 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + L + + + +++ ++ + + Sbjct: 213 GKKLVSRLTAEYIDMDSLYHWHLVNYVKRDFKGMREIMTMGDGLDSVIKMDPQDFFITGE 272 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 A + L + + +E++ R +I LI + A + Sbjct: 273 DAPQMTNTKLYQYLRRQKERGIPGAQKFENEYNNRFAMPFAALILTLIGVSLA---SRKV 329 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + + +++S ++ F + N +L ++L I + +I Sbjct: 330 RGGTGLHLGFGIALS-AIYILFCTVSSMFAINGTMPSLLAIWLPNIIFTTIGII 382 >gi|82524032|emb|CAI78710.1| hypothetical protein [uncultured Flavobacteriaceae bacterium] Length = 358 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 49/361 (13%), Positives = 123/361 (34%), Gaps = 4/361 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL+ +F M L + I + + ++I + + L ++ Sbjct: 1 MKILDWYILKRYLFTFFMMLLLFIPIGITVNLAEKIGKMLENEVPLKAIVIFYLNFTVHF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + + + NTE++ ++G S ++P + A ++ Sbjct: 61 AYLLFPLFLFLSVIWFTSKLANNTEVIAFLSSGVSFSRFLRPYMIGASIIGGLALFLGMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF-IVDSR 179 + P + K + + N+F +++D+ +I +S ++ NN L F + Sbjct: 121 LTPIASKGFNEFEYKYLYPNRKTTQDVNVFRQINDNEFIYVSSFDLNNKLGINFTLEHIE 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 D + A++ L D I ++ + K + + + ++ Sbjct: 181 DNKLTYKISAKTIKYIAKDTTYRLVDYVKRTVGKIEDELVFERNKDTLFAFDVEDLTPVI 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 A + L + Y +++ + + I +I++ ++ Sbjct: 241 YIAEILPYTELTKFIEKEKTRGSSNIGRYELVLYRKWSLPVSVFILTIIAVAV---SSIK 297 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYT 359 R+ + I + I+ + EQ+ + I F + I + + Sbjct: 298 RRGGMGVNLAIGICIAMVFVFFDKIFGVLAEQSNFPSIIAVWFPNVVFGILAFYLLRNAK 357 Query: 360 K 360 + Sbjct: 358 R 358 >gi|86749599|ref|YP_486095.1| permease YjgP/YjgQ [Rhodopseudomonas palustris HaA2] gi|86572627|gb|ABD07184.1| permease YjgP/YjgQ [Rhodopseudomonas palustris HaA2] Length = 361 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 44/357 (12%), Positives = 108/357 (30%), Gaps = 10/357 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + Y S L + + + + + + S ++ + S + +P + Sbjct: 3 LNTLGRYFAARFVSSALGVFFGLFVLLVFVDYIDLLRRAGGLSVSAFVIAQASFFRVPQL 62 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + PFC + +++R EL+I G S I P L+ A+ L +F N Sbjct: 63 LERLLPFCILIGGMTCYLALSRRLELVIARAAGLSAWQFIAPALWSALALGVFASAVFNP 122 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFR----LDDDLYIKISKYNPNNTLQGIFIV 176 + + KQ+ A+ + S + N F+ + I ++ + V Sbjct: 123 MSAYMQERAKQMEAELFGQGSGSLQDANGFWMNQVSPEGQSIINAARSQQQGAVLSGISV 182 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + ++ L+ +L D + ++ + + A Sbjct: 183 FRFEPDFQFKDRIEAREAVLEPGYWLLKDVRKYTLDSAPEEQATL---RLPTALTLAQVR 239 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + + + YR ++HK L + +++ + Sbjct: 240 NSFATPESVSFWQLPSYIKASESSGFATAG-YRLQYHKLLAKPFLLAAMVMLAASVSL-- 296 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 R + + F ++ + + C+ + + Sbjct: 297 RFFRFGGVQKMVLSGVGAGFLLYILSKVTEDLSKAELMHPLAAAWLPVCVGGLAGFL 353 >gi|300725025|ref|YP_003714351.1| putative transmembrane protein, transport [Xenorhabdus nematophila ATCC 19061] gi|297631568|emb|CBJ92277.1| putative transmembrane protein, transport [Xenorhabdus nematophila ATCC 19061] Length = 359 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 52/355 (14%), Positives = 119/355 (33%), Gaps = 2/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI R I ++ LM+ +V ++ +I+ + ++ V + + +P + + Sbjct: 5 LDRYIGRTILQTILMTLFMLVSLSGIIKFVDQLRKVGQGEYTALSAGIYTLLSVPKDIQI 64 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L ++ +EL+++ +G +R+ + V+ AI L + + + P Sbjct: 65 FFPMAALLGALLGLGALATRSELVVMQASGFTRLQVAGSVMKTAIPLVLLTMVIGEWVAP 124 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + ++ + + L+ + D S N + + Sbjct: 125 QGEQLARNYRSQKMFGGSLMSTTKGLWAKDGRDFVYIQSVGKDNALNGVSIYHVDENRKL 184 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDI-SIMKFKSYTLQTESANSSTIVLKA 242 + YA S D D Q L+ E + + I S + Q + L Sbjct: 185 LSVKYAASAVYDKDNQQWKLSQVEESDLTKFGRIIGSQRVSAEWNSQLTPEKLGVVSLDP 244 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++ L + + Y+ K++ L + L+++ Sbjct: 245 DALSIRGL-HQYITYLKLGQQDAGRYQLNMWKKVFAPLSVAVMMLMALSFIFGPLRCVPM 303 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + IS+ F V + + P + L L L++ KK Sbjct: 304 GFRVVVGISMGFLFYVLNEIFGPLSLVYSMPPLLGALLPSLLFFGLSVYLLLHKK 358 >gi|296116657|ref|ZP_06835267.1| permease YjgP/YjgQ family protein [Gluconacetobacter hansenii ATCC 23769] gi|295976869|gb|EFG83637.1| permease YjgP/YjgQ family protein [Gluconacetobacter hansenii ATCC 23769] Length = 371 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 47/359 (13%), Positives = 110/359 (30%), Gaps = 14/359 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTVL 61 + LYI R + L F+ + + + + VSS +++ +I+ IP + Sbjct: 6 TLSLYIARQFTYAVLAVIAFLTGLITLFDFIDLLRRVSSRPNVPASLVSEIAVLHIPFAM 65 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIK-PVLFLAILLSIFLFISENI 120 + PF + + R++EL++ G S + PV ++ ++ + + Sbjct: 66 LEILPFGVLLGGIICFWRLARSSELVVARAAGISAWQFLAGPVGCALLIGALSTTVISPL 125 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 R + + + + + + + + D+ Sbjct: 126 SSAMYRRAEILDQQYLRESTVKTINMSGGALWMRQSDSGLVDHGVAIIHARRVRLRDNVM 185 Query: 181 TQTHKIYYAQSGSIDL----DRQAIILNDGEVH----RKSPISKDISIMKFKSYTLQTES 232 + + G + + L +G R ++ M + Sbjct: 186 RISGISIFRLDGQDHMLARIEAGHGYLGNGRWVLEGARLLHPDENPVDMGHMTLRADLTL 245 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 A + N ++ L N +R F LT + L++ A Sbjct: 246 AGVQDSLASPNTLSVWAL-PGFIKLLNRSGFSSIRHRLRFQSLLTLPVLCGTMALVA--A 302 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 R+ + I + + F +F S I + ++ P+L + + + L Sbjct: 303 GFSMRPARRGGVVRMISLGVGAGFALFAI-SKIAAQFGESGALPPVLAAWAPTGAGLCL 360 >gi|170681358|ref|YP_001745244.1| YjgP/YjgQ permease [Escherichia coli SMS-3-5] gi|170519076|gb|ACB17254.1| putative permease, YjgP/YjgQ family [Escherichia coli SMS-3-5] Length = 359 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 49/360 (13%), Positives = 125/360 (34%), Gaps = 3/360 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTLAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + IL+ + + + ++ S + + + Sbjct: 181 DLSLESYIFARSASIEDDKTWILHGVNHKKWLNGKETLETSDNLAWQSAFTSMDLEELSM 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + YR ++L Q + + L+++ Sbjct: 241 PGNTFSVRQL-NHYIHYLQETGQPSSEYRLALWEKLGQPILTLAMILLAVPFTFSAPRSP 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + + + + + + +++ P+ L L + L + Y + Sbjct: 300 --GVGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYWYDR 357 >gi|90416561|ref|ZP_01224492.1| permease YjgP/YjgQ [marine gamma proteobacterium HTCC2207] gi|90331760|gb|EAS46988.1| permease YjgP/YjgQ [marine gamma proteobacterium HTCC2207] Length = 356 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 47/356 (13%), Positives = 115/356 (32%), Gaps = 2/356 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M ++ + + + ++ L +V + V I+ + V+ + L+P+ Sbjct: 2 MHRLSWHVGKTVFAAIAVTLLVLVGLDSVGAIIDQSADVT-RNYFFADAMIYVVTLVPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + PF + L + N+E++++ G S + ++ VL ++ I Sbjct: 61 IYEYIPFASLIGCLVGLGLLAGNSEVIVMRAAGVSPLRIVGFVLKPVLIFIILGMTIGEY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + + + L+ R + + + + + Sbjct: 121 FSPYLDQLAEGKREYLRKGESAQDSSSGLWNREGNQFVHANAVFPGGVLYGVTRYQFNDE 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 Q + +A + + + I + V R S + + + + + +L Sbjct: 181 RQIQEASFASRATFNSTERYWIEENVSVTRFLGDSTERDKLITRRWDSELTPNVLMLNIL 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 A+ ++ L + + +Y ++ Q L + L+ I Sbjct: 241 PADSLSIESLYS-YIAFLELQNIDTASYEVALWRKALQPLIIIGLVLLGISFVFGPLRDS 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 I + ISF +F + + Q P + +L LFC+ L+ + Sbjct: 300 TMGFRIFIGVVFGISFRIFQDMLGPLSVVFQFPPLLAVLVPILFCVLVGVFLLRRS 355 >gi|103487657|ref|YP_617218.1| permease YjgP/YjgQ [Sphingopyxis alaskensis RB2256] gi|98977734|gb|ABF53885.1| permease YjgP/YjgQ [Sphingopyxis alaskensis RB2256] Length = 402 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 51/358 (14%), Positives = 125/358 (34%), Gaps = 9/358 (2%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI R I + + + + + ++L+ + V++ ++++ ++ LIP L + Sbjct: 7 IDRYIARLIFFPMVGTLVLSAMLLVLEKMLRLFDFVATEGGPVSVVWRMLANLIPEYLSL 66 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + + ++EL ++ G S L++ A+ L+ I+P Sbjct: 67 GIPIGLMLGILLAFRRLATSSELDVLKGVGMSFGRLMRMPYVYAVGLAALNLAIVGFIQP 126 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTL-QGIFIVDSRDTQ 182 R + L + + + ++ F RL + + ++I + +GIF+ + Sbjct: 127 YARYAYEGLQFELRSGALGASIKVGEFTRLGERMTLRIEESYNEGRSLRGIFVRGEQRDG 186 Query: 183 THKIYYAQSGSIDLDRQ----AIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 A G + L+ G + +SP ++ F ++ L Sbjct: 187 QRVSATASRGQFLATDDPETIILRLSQGVLIHESPKFAVPRVLTFDNHDLPIPLPRIEAF 246 Query: 239 VLK---ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 L+ + + L + + R+ FH R+ + + + LI++ A Sbjct: 247 RLRGGADREMTIPELFVAGK-DRRQSEQTRLESRANFHFRIVEVMSMFLIPLIAVALAVP 305 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + + L + + + +P + LF +I++ Sbjct: 306 PKRSTSSLGVFLSIVLLVTQHKINQYAEDLGARGAVDPLIALWVPFLLFAALAIWMYY 363 >gi|218961269|ref|YP_001741044.1| putative Permease [Candidatus Cloacamonas acidaminovorans] gi|167729926|emb|CAO80838.1| putative Permease [Candidatus Cloacamonas acidaminovorans] Length = 362 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 46/357 (12%), Positives = 117/357 (32%), Gaps = 5/357 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + YI+R R++L+ L V I VI ++ + + + + +P + Sbjct: 1 MRILDKYIIREFLRTYLIIFLSFVAIFVVIDVIDNLPRLIRNGATAQQATIYYLMRLPYL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + +P + ++++++++ E + I G S + P+ + +++SI + + Sbjct: 61 LVLTSPVTVLLTGLFMMSALSKHNESIAIRAAGISIKRAMLPLFGIGLIISIAVAVFGEY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +T + + + I+D Sbjct: 121 VVPWAETTKNYVYNVQIKGQQPDDQMLKARIHYQGKANDFYYFGFFDGYKNNLKIIDLTR 180 Query: 181 TQTHKIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + S D + IL D ++ R + + ++ + + Sbjct: 181 IDFKTKQITEHITASSADWNGSRWILKDCDLRRFANGKQVFMAHYPQTDLVILDVQPQDF 240 Query: 238 IVLKANDQNLSFL-LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 I + +L+F L + + H +++ L +I I A Sbjct: 241 IRISQKTLSLNFWQLKEYIGRMKKLGDNAAREIVDLHMKISFPLTNLIVIFFFIPIATSN 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFW-GFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 + R I + + + + + + + NP++ F + + L Sbjct: 301 IRSKGRGWIIMLGLVVCFIYLIVVRVCQSLGYNSIINPFWAAWFPNIFFTLLGLGFL 357 >gi|119503286|ref|ZP_01625370.1| hypothetical protein MGP2080_11498 [marine gamma proteobacterium HTCC2080] gi|119460932|gb|EAW42023.1| hypothetical protein MGP2080_11498 [marine gamma proteobacterium HTCC2080] Length = 353 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 41/355 (11%), Positives = 102/355 (28%), Gaps = 4/355 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y+ + + + +V + + ++ ++ +S L + +P Sbjct: 1 MGRFDRYLAGNVLGATVGVLAVLVGLDALSSVIDELDDLSPD-YGFTDALIYVAFTLPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L PF + L + +EL ++ G S L L A+LL++ F+ Sbjct: 60 LHEYVPFAALIGALVGLGRLAATSELTVVRAAGRSLPQLALGTLRPALLLAVLGFLVGEF 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P A AQ + + ++ R D + + + Sbjct: 120 VSPVAEQFAVSHKALAQGSQSSFTGRGGVWNRDGDTFIHVSAVERGGIIHGVQLLTFDEE 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + A+ G+ +L + + + + + + + Sbjct: 180 RRLTRSLRAERGTYQ--GGQWLLEKVSRTELTQDRAVTDALIQQVWETEVTPQLLALEAV 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + L P + + F +++ Q L+++ Sbjct: 238 ALDSLPTLEL-WPYAQYLRKQGLMYRDVELAFWRKVLQPFAVAGLVLVAMSFIFGPLREG 296 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + + F + F I P + C + L+ + Sbjct: 297 SLGARIFTGVIIGVVFRISQDFFGPASLIFGLPAILAAAAPIGVCWIAGGWLLTR 351 >gi|78779866|ref|YP_397978.1| putative permease [Prochlorococcus marinus str. MIT 9312] gi|78713365|gb|ABB50542.1| permease-like protein [Prochlorococcus marinus str. MIT 9312] Length = 400 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 54/379 (14%), Positives = 125/379 (32%), Gaps = 27/379 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQ-ILQRINLVSSSTESLNILLKISGYLIPTVL 61 + ++L I L + I+ + + I + + L+ Y +P+ L Sbjct: 25 LIDRWLLGQIIPPMLFAISAFTVISLSVGVMFDLIRKIVEYGLPVLKALQALIYSLPSFL 84 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + T ++ N+ELL + + G +I P + ++I ++ F + + Sbjct: 85 VLSFPMAVLLSTLLSYGKLSANSELLALRSLGIKTSRIIAPAIAVSIFMTGLTFYFNDNL 144 Query: 122 EPK----------------CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN 165 P + + + +I + Sbjct: 145 VPNSNKLAELTLRSGVGSSFNREKSKNNIIFSRKGSRIDTNNKPTKTNTFLTHIFYASRF 204 Query: 166 PNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKS 225 NNT++ + ++D +I A+S D + + DG + + + + + FK Sbjct: 205 ENNTMREVTVLDFSRVNIKQILTAKSAVFDKKNSSWVFADGSIVS-TDSTGQTTSINFKQ 263 Query: 226 YTLQT--ESANSSTIVLKANDQNLSFLLNPNPNNPNYRP-ELLETYRSEFHKRLTQWLFP 282 Y + + + A+D +L L + + + ++ T Sbjct: 264 YLYPFVEGPLDLARVPKDASDMSLKEALEAERIYKKIGDLKQIRKIQVRIQEKFTLPCAC 323 Query: 283 VIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 ++FGLI + + K +S+ + +++ S+I PI+ + Sbjct: 324 LVFGLIGSILG--SQSNLRSSKSQGFGLSVIL-ILMYYVISFICSSFGVKGLLPPIIAAW 380 Query: 343 LFCISSI---FLLMIKKKY 358 I S+ F + Y Sbjct: 381 FPVIISLSGGFYFLRNSNY 399 >gi|145635439|ref|ZP_01791140.1| predicted permease [Haemophilus influenzae PittAA] gi|145267313|gb|EDK07316.1| predicted permease [Haemophilus influenzae PittAA] Length = 367 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 49/354 (13%), Positives = 128/354 (36%), Gaps = 15/354 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + +S + L ++ I + Q ++ + ++ +++ + G +PT+ Sbjct: 2 ILIRYLIKEVFKSQIAILLILLLIFFSQQFVRVLGAAANGNVPADLVFSLLGLGMPTMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P C + + +E+ ++ G + L+K L +++L + + + Sbjct: 62 LMLPLCLFIAILLTFGRLYAESEITVMRACGVGQRILVKVALIMSLLTAGIAAYNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + A+ T L F +++ + +N ++ +++ + Sbjct: 122 PWAIQKQVNMVEDAKANPTVGVLSSGQFISTNNNNVVLFIDKIKDNQIRNVYLFQMTPQK 181 Query: 183 --THKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G + Q + L + + + + D I F Y ++ Sbjct: 182 QTKPSVITAEKGELIALPNGDQVLNLKNTKRVEGTSVLPDFRITHFDEYQAYLGYQSAEN 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + LS L++ + ++E H R+T L + LI++ + Sbjct: 242 TNDEVAELTLSQLIDL----------NSSSAKAELHWRITLILAVPLMALIAVPLSRVNP 291 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + KI P + I F + F + + L F + ++ L Sbjct: 292 RQGRFAKILPALLLYLIYFLLQSSFKSAGSAGKLEAELLMPLVNIGFFLLAVVL 345 >gi|255691880|ref|ZP_05415555.1| putative membrane protein [Bacteroides finegoldii DSM 17565] gi|260622433|gb|EEX45304.1| putative membrane protein [Bacteroides finegoldii DSM 17565] Length = 365 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 43/362 (11%), Positives = 121/362 (33%), Gaps = 7/362 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPTV 60 K + YI++ +++ + I+ IA V ++++ + + I+ + IP Sbjct: 8 KRLDWYIIKKFLGTYVFAIALIISIAVVFDFNEKMDKLMEHEAPWSKIIFEYYMNFIPYF 67 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +P + + + N+E++ + +TG S +++P + A ++++ F+ + Sbjct: 68 SNLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMMRPYMISAAIIALTTFMLSSY 127 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + PK T + + + + N T + D Sbjct: 128 VIPKGSVTRLNFEDRYIKPKKQNTARNVQLEVDSGVIAYIDNYNNAMKTGNRFSLDKFVD 187 Query: 181 TQTHKIYYAQSGSIDLDR-QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + A+ + D ++D + + + I+ + E ++ + Sbjct: 188 KKLVSHLTARRVTYDTTTVHKWTIHDYMIRELDGLKEKITKGDRIDSIINMEPSDFLIMK 247 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + L + ++ + E+HKR+ I +I + + Sbjct: 248 NQQEMLTSPQLSDYIEKQKRRGFANIKEFEIEYHKRIAMSFASFILTIIGVSL----SSR 303 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF-CISSIFLLMIKKKY 358 + + + + F I N P++ +++ + + + +K Sbjct: 304 KTKGGMGLHLGIGLGLSFSYILFQTITSTFAINGNVPPVIAVWIPNILYAGIAFFLYQKA 363 Query: 359 TK 360 K Sbjct: 364 PK 365 >gi|294053783|ref|YP_003547441.1| permease YjgP/YjgQ family protein [Coraliomargarita akajimensis DSM 45221] gi|293613116|gb|ADE53271.1| permease YjgP/YjgQ family protein [Coraliomargarita akajimensis DSM 45221] Length = 372 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 52/372 (13%), Positives = 117/372 (31%), Gaps = 16/372 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L+ +F+++ +V + + + + + SS + +L +P Sbjct: 1 MSLLDRYVLKEWVVAFVLTLGVVVGVLVLQNMYDSLPDLLSSNATGPEILFYYMLSLPGY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP V P F + L +++RN E++ + TG S + + + LS LF Sbjct: 61 LPTVLPITFLVSLLFSLGTLHRNNEVIAMRATGASLFRISRSLWVAGFALSGLLFYLTAE 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR- 179 + P + + + ++ F + Sbjct: 121 VVPMTVERARTFIDNLSYTAKEKKQDVDAREVGLLHNLGFDNRKEGRLWFMNRFSERAWL 180 Query: 180 -----------DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD-ISIMKFKSYT 227 D A+ G D + + G + P + D I ++ F+ Sbjct: 181 AIGVNVHTRTADGIEVLRVSAEEGFYDEVKGYWVFLRGRELQIDPDTGDEIRLLSFEEKA 240 Query: 228 LQTESANSS---TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVI 284 + + + K N+ +L L P + Y + + L ++ Sbjct: 241 YPEYTEDPDLMLAMHKKPNELSLLELREIIETVPAEENPAVHAYTTRYFSLLAAPFSCLV 300 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 I++ A I ++ + + S + + P+ L F Sbjct: 301 LVGIAVPFAVSGVRANPMIGISKCMGYFAVFYVLITISSILGERHMIAPWLAAWLPNFAM 360 Query: 345 CISSIFLLMIKK 356 + S++L + + Sbjct: 361 LVVSMWLYLRAR 372 >gi|301156462|emb|CBW15933.1| conserved inner membrane protein [Haemophilus parainfluenzae T3T1] Length = 363 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 43/357 (12%), Positives = 123/357 (34%), Gaps = 19/357 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + +S + ++ I + Q+++ + ++ +++ + G +PT+ Sbjct: 2 ILTRYLTKEVFKSQIAILFILLLIFFSQQLVRVLGSAANGKVPADLVFSLLGLGMPTMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P C + + +E+ ++ G + L++ L L++ + + + Sbjct: 62 LMLPLCLFIAILLTFGRLYAESEITVMRACGVGQRILVRVALILSLFTAGLAAYNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + A+ T L F ++ ++ N + +++ + Sbjct: 122 PWAIQKQAAIVEDAKANPTMGALASGQFMSTSNNNFVLFIDKINGNQISDVYLFQMKAKG 181 Query: 183 --THKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G + Q + L + + + D I F Y +++ Sbjct: 182 QTKPSVVTAEKGELKALPNGDQVLNLQNTLRVEGTSVLPDFRITHFDDYQAYLGHQETNS 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +A + + LL + ++E H R+T L + LI++ Sbjct: 242 ESDEAAELSFEQLL----------KDKSAAAKAELHWRITLILAVPLMALIAV---PMSK 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-PYYIPILYLFLFCISSIFLLM 353 + ++ + I +L + F S + ++ L + +++ Sbjct: 289 VNPRQGRFAKILPALLLYLIYFLLQSSFKSAGGADKLDAGLLMPLVNIAFLILGIVL 345 >gi|260551089|ref|ZP_05825293.1| permease YjgP/YjgQ family protein [Acinetobacter sp. RUH2624] gi|260405856|gb|EEW99344.1| permease YjgP/YjgQ family protein [Acinetobacter sp. RUH2624] Length = 356 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 39/356 (10%), Positives = 111/356 (31%), Gaps = 4/356 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y+ + + + + + + + L + + + + P L Sbjct: 5 RIVAKYVTKTTALAMFGTTIVLSVLQVLFTYLGELGEL-KPDYNAWQAFIYVLWGAPRYL 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ N+EL+++ + G S ++ V+ A+LL + F + Sbjct: 64 YEILPISALIGAVIGLGALASNSELIVMRSVGISLWRIVGWVMRSALLLIVLSFALSEWV 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + + +A + +Q + ++ Sbjct: 124 VPYTNEKAQSIKSHRSVAALGEVKGYWSREGQRFIYIDYANSQGNLRDIQ--VVDFDKEY 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + A+ G D Q + + + + ++ +S L + + L Sbjct: 182 HLQSVINAEQGKFIKDGQWSLQKASQTDILTDGNSILNNHDQQSLGLALQPKYVHMVTLD 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 D + S L++ Y ++ +TY+ F +++ + L++ + Sbjct: 242 PEDLSPSQLISFMRYMDEY-SQVPKTYQLAFWQKVASPFSLITLVLVACSFIFGPLRQQS 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I + + + F F + +L + + L+ + + Sbjct: 301 MGFRLVIALFIGLGFYYLQDFLGYASLVYAPSPAWFVLVPIILMFGAGSYLLYRAR 356 >gi|237740742|ref|ZP_04571223.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31] gi|229422759|gb|EEO37806.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31] Length = 363 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 58/362 (16%), Positives = 126/362 (34%), Gaps = 11/362 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K ++YI + + FLM+ + + + + Q + I ++ + L+P + Sbjct: 3 KKLDIYISKYFIKYFLMNIIGFMGVFLLAQTFKIIKYINQGKLVGGEIFDYIINLLPKMF 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + ++ M N E++ + +G + +++ L +A ++S+F+F N I Sbjct: 63 VETAPLSVLLAGLITISIMASNLEIVSLKTSGIRFLRIVRAPLIIAFIISLFVFFVNNSI 122 Query: 122 EPKCRSTIKQLSA-----KAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 K + I +L T L I++ N I + Sbjct: 123 YTKSLAKINFYRKGEIDASLRLPTTKENAFFINNTDGYIYLMGNINRETGNAEKIEIVVY 182 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 D+ ++ +I AQSG D D + +L+ ++ +I+ +++ S + + N Sbjct: 183 DTEISKPVEIITAQSGKYDKDNKKWMLSGVNIYNVETKK-NITKVEYDSDRFREDPNNFI 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L E Y +E KR + I I + Sbjct: 242 RAAAEDPRMLTIKELKKTIKEQKNIGEDTRIYLAELAKRYSFPFASFIVAFIGLSV--SS 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMI 354 VR + + I + +G + S + N P + ++ I + + Sbjct: 300 KYVRGGRTTLNLVICVVAGYGYYLV-SGAFEAMSLNGILNPFISSWIPNILYFIIGMYFM 358 Query: 355 KK 356 + Sbjct: 359 NR 360 >gi|189461313|ref|ZP_03010098.1| hypothetical protein BACCOP_01963 [Bacteroides coprocola DSM 17136] gi|189431842|gb|EDV00827.1| hypothetical protein BACCOP_01963 [Bacteroides coprocola DSM 17136] Length = 378 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 47/363 (12%), Positives = 118/363 (32%), Gaps = 7/363 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 +K + YI+ ++ + I+ IA V + + I+ ++ L I+ IP Sbjct: 20 LKRLDRYIIVKFLGTYFFAIALIISIAVVFDVNENIDHFINNKAPLKAIVFDYYLNFIPY 79 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + +TG S L+ P + A ++S F+ Sbjct: 80 YTNLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRLMVPYMISAGIISAVTFVLGT 139 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P T + + + + Y + + + + Sbjct: 140 EVIPTGSVTRLKFEERYKKKKSADYARNIQLEVDSGVVAYMERYDAYSKSGYHFSLDKFE 199 Query: 180 DTQTHKIYYAQSGSIDLDR-QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 D + A+ + D I+ D + + + I+ ++ E + Sbjct: 200 DHKLVSHLTARRATYDTTMYHRWIIRDYMIREMRGMREYITRGDRLDSIIKMEPQDFLIT 259 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + L ++ + E+H+R+ I I + + Sbjct: 260 RGQQETMTSPQLKEYISKQKQRGFANIKEFEVEYHRRIAMSFAAFILTSIGLSL----SS 315 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL-LMIKKK 357 + + + + F I N +P + +++ I +F+ + + +K Sbjct: 316 RKVKGGMGLHLGIGLGLSFSYILFQTISSTFAINGNMMPAIAVWIPNILYLFIAIYLYRK 375 Query: 358 YTK 360 K Sbjct: 376 APK 378 >gi|189501496|ref|YP_001957213.1| permease YjgP/YjgQ family protein [Candidatus Amoebophilus asiaticus 5a2] gi|189496937|gb|ACE05484.1| permease YjgP/YjgQ family protein [Candidatus Amoebophilus asiaticus 5a2] Length = 357 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 63/357 (17%), Positives = 118/357 (33%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL+ SFL I+ I +I I ++ S + +P + Sbjct: 1 MKLLDRYILKKFLFSFLFILCLIILIITLIDITEKNEYFIRHKLSFREIADYYYNFLPFM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 MV+P + T V + + + TE++ I + G S + + P L A L+IF F+ Sbjct: 61 TNMVSPITIFITTIFVTSRLAQRTEIIAILSGGVSFVRFLVPYLIGATFLAIFNFMLIGW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I + + S D + N + + RD Sbjct: 121 ILADANKKRVAFEIEYVDSPYRSSSRNIHIKLSTDTYLYVGYYRSYNGLGTDVTLETIRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + A++ + L D + + + I+ K TL + S Sbjct: 181 NRLMEKISAKAIRWVEESGQWQLKDWICRKIDGLDEHITSGKAMDLTLNLHPEDFSINPK 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 L+ L + L + +E + R +I L+ +V + +++ Sbjct: 241 LHEMLTLTELDKHIQKLREKGTDNLNFFLTEKYVRYMSPFAAIILTLMGVVVSARKSRGG 300 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 +I FI I F + N + +F I ++ L + K Sbjct: 301 VGLQIALGFILALIYIAFFLFARGAANVKGNNLLLTIWMPNIVFSIITLILYKLTPK 357 >gi|29346244|ref|NP_809747.1| hypothetical protein BT_0834 [Bacteroides thetaiotaomicron VPI-5482] gi|253568323|ref|ZP_04845734.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|298385619|ref|ZP_06995177.1| membrane protein [Bacteroides sp. 1_1_14] gi|29338139|gb|AAO75941.1| putative permease [Bacteroides thetaiotaomicron VPI-5482] gi|251842396|gb|EES70476.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|298261760|gb|EFI04626.1| membrane protein [Bacteroides sp. 1_1_14] Length = 365 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 44/362 (12%), Positives = 119/362 (32%), Gaps = 7/362 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPTV 60 K + YI++ +++ + I+ IA V ++++ + + I+ + IP Sbjct: 8 KRLDWYIIKKFLGTYVFAIALIISIAVVFDFNEKMDKLMEHEAPWDKIIFEYYMNFIPYF 67 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +P + + + N+E++ + +TG S +++P + A +++ F+ + Sbjct: 68 SNLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMMRPYMISAAIIAAATFMMSSF 127 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I PK T K + + + + + T + D Sbjct: 128 IIPKGSVTRLNFEDKYIKPKKVNSVRNVQLEVDSGVIAYIDNYNDGMKTGNRFSLDKFVD 187 Query: 181 TQTHKIYYAQSGSIDLDR-QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + A+ + D ++D V + + I+ + + ++ + Sbjct: 188 KKLVSHLTARRITYDTTTVNKWTIHDYMVRELDGLKEKITKGDRIDSIINMDPSDFLIMK 247 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + L ++ + E+HKR+ I +I + + Sbjct: 248 NQQEMLTSPELSEYIEKQKRRGFANIKEFEIEYHKRIAMSFASFILTIIGVSL----SSR 303 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF-CISSIFLLMIKKKY 358 + + + + F I N P + +++ + + + +K Sbjct: 304 KTKGGMGLHLGIGLGLSFSYILFQTITSTFAINGNVPPAIAVWIPNILYAGIAFYLYQKA 363 Query: 359 TK 360 K Sbjct: 364 PK 365 >gi|254521231|ref|ZP_05133286.1| putative YjgP/YjgQ family permease [Stenotrophomonas sp. SKA14] gi|219718822|gb|EED37347.1| putative YjgP/YjgQ family permease [Stenotrophomonas sp. SKA14] Length = 363 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 46/363 (12%), Positives = 109/363 (30%), Gaps = 11/363 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+LY+ R + + L++ +V + V+ + + +L Y +P Sbjct: 2 RFDLYLGRTVFTTVLLTWAVLVGLDVVMAFSGEFKDIGKNGYTLGHAAAWVLYTVPRRAY 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + L + +EL + G SR L V LL+ + S + Sbjct: 62 TMFPTAAVIGALMGLGQLAATSELTALRALGLSRRRLSVSVAIALSLLTAVMVFSAETLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLY--------IKISKYNPNNTLQGIF 174 P + L A A+ + + + + D + + L+ + Sbjct: 122 PWGQDRADALKASAKWGRDIATTRYSGLWAREGDTFLSAAGGEEQLVGDKGTRLILRDVR 181 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + + + + DR +L S + + + + ++ Sbjct: 182 LYRIAEDGQIASITHA-ATAEHDRDGWVLTGVRRDTFGERSATRQEVAREPWNSRLDAGA 240 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + + K + ++ L + + + R L + L ++ A Sbjct: 241 LAAGIAKPRNLRITEL-RASIEYRERNGLDARDFEDIYWSRWFYPLNVLALCLAAVPFAF 299 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 K + I ++ F + F Y L + ++ L+ Sbjct: 300 GSLRSGGMGKRLFLGILFALGFWLLQLFFG-RMAGALKFDYRIAYALPPIVMLAVSGLLF 358 Query: 355 KKK 357 ++K Sbjct: 359 RRK 361 >gi|134095576|ref|YP_001100651.1| hypothetical protein HEAR2399 [Herminiimonas arsenicoxydans] gi|133739479|emb|CAL62530.1| putative permease [Herminiimonas arsenicoxydans] Length = 382 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 51/382 (13%), Positives = 115/382 (30%), Gaps = 26/382 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y IGRS + + + + ++ + V + L +P Sbjct: 1 MKILQKYFAAEIGRSVIFVLIAFLALFGFFDLIAELKAVGHGGYKIQHALLFVLLSMPGY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + T L+ +E I+ + S ++ + ++ +I F+ Sbjct: 61 LYELMPIAALIGTIWTLSQFAARSEFTIMRASSMSTGMAGLMLIKIGLVFAIVTFVVGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-----------LYIKISKYNPNNT 169 + P + +++ Q L+ + ++ + P+ Sbjct: 121 VVPASSNMAEKIRTLNQGGSLSQEFRSGLWTKDMIRSNGKDGEAIGSRFLNVRTVQPDGQ 180 Query: 170 LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRK-----------SPISKDI 218 L + I + + + +L++G + I+ I Sbjct: 181 LTDLKIYEFNRNFHLTALITAARADYQGDNVWLLSNGSQAEFGETELMGAAVATDITTAI 240 Query: 219 SIMKFKSYTL--QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRL 276 S F S L + S + L+N Y K++ Sbjct: 241 STRNFASKPLISEVTPEILSVGFSDPAKMSAYDLVN-YTQYLAENNRETARYEIALWKKV 299 Query: 277 TQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISF-GVFWGFSYIIHKIEQNPYY 335 + +++ A I + +SF + FS++ P+ Sbjct: 300 VYPFAVFVMMALALPFAYLHFRSGGVSLKIFTGIMIGVSFQLINSLFSHLGLLNTWPPFA 359 Query: 336 IPILYLFLFCISSIFLLMIKKK 357 IL LF +++I L+ ++ Sbjct: 360 TAILPSLLFLLAAIGALLWVER 381 >gi|284929068|ref|YP_003421590.1| putative permease [cyanobacterium UCYN-A] gi|284809527|gb|ADB95232.1| predicted permease [cyanobacterium UCYN-A] Length = 402 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 49/372 (13%), Positives = 129/372 (34%), Gaps = 20/372 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRI-NLVSSSTESLNILLKISGYLIPTVL 61 + YIL + S + + I L + N V S L L+I IP Sbjct: 31 LIDRYILSQLIGPLAFSVGLVSILGVAIGYLSDLSNKVVESDLPLIQALEIIFLKIPEFT 90 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + T ++ ++EL+ + G S L+ P ++++++ FI +I Sbjct: 91 AYALPISMMLSTLLTYGRLSGDSELIALRVCGASLYRLVMPAFIISLIMTGITFIFSELI 150 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI------------KISKYNPNNT 169 P + + + + +++F+ + + + ++ Sbjct: 151 VPAANYRVTSILVEHLQEERPYWQNKDIFYPDYEKVVLPDGSTEKQLKHLFFAEKFDGQK 210 Query: 170 LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ 229 L+ + +++ + + ++I + S + + + +G +++ +P S FK L Sbjct: 211 LETLTVLEWLEKKLNRIVVSDSAAWNAQDETWDFFNGTIYQLAPDSSYQGTYSFKHRQLP 270 Query: 230 TESANSSTIV--LKANDQNLSFLLNPNPNNP-NYRPELLETYRSEFHKRLTQWLFPVIFG 286 + I + N+ + L T++ +++ ++FG Sbjct: 271 LAKSAFEFIQEGRDPYEMNIFQAQKYMKILRVMEDEQKLRTFQVRVQQKIAFPFICIVFG 330 Query: 287 LISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCI 346 +I + + +S+ I F +++ ++I + P + +L Sbjct: 331 VIGSALGTSPQYINR---AMGFGLSVVIVF-IYYLLGFLIGSLGLIGVVSPFMAAWLPNA 386 Query: 347 SSIFLLMIKKKY 358 + + + + Sbjct: 387 IGLGIGLYLLYW 398 >gi|332753041|gb|EGJ83425.1| hypothetical protein SF434370_3220 [Shigella flexneri 4343-70] gi|332998924|gb|EGK18515.1| hypothetical protein SFVA6_3889 [Shigella flexneri VA-6] gi|333000167|gb|EGK19750.1| hypothetical protein SFK218_4002 [Shigella flexneri K-218] Length = 359 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 49/360 (13%), Positives = 125/360 (34%), Gaps = 3/360 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDGVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + +L+ + + + + ++ S N + + Sbjct: 181 DLSLESYIYARSATIEDDKTWVLHGVNHKKWLNGKETLETLDNLAWQSAFTSMNLEELSM 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + YR ++L Q + + L+++ Sbjct: 241 PGNTFSVRQL-NHYIHYLQETGQPSSEYRLALWEKLGQPILTLAMILLAVPFTFSAPRSP 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + + + + + + +++ P+ L L + L + Y + Sbjct: 300 --GMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYWYDR 357 >gi|167753885|ref|ZP_02426012.1| hypothetical protein ALIPUT_02170 [Alistipes putredinis DSM 17216] gi|167658510|gb|EDS02640.1| hypothetical protein ALIPUT_02170 [Alistipes putredinis DSM 17216] Length = 372 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 41/364 (11%), Positives = 120/364 (32%), Gaps = 10/364 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPTV 60 K + YIL ++ + I+ + + +++I+ + + L I+ IP Sbjct: 14 KILDRYILGKFLSTYFFAIAMIIVVVVIFDYVEKIDNFTETKAPLKAIIFDYYLNFIPFF 73 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + + + M TE++ + + G S L+ P A++++ Sbjct: 74 INQFSGLFTFIAVIFFTSKMAYQTEIVAMLSGGMSFRRLMWPYFLGALIIASLSLGLNLW 133 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + ++N++ +++ + I Y+ + Q F Sbjct: 134 LIPVSQRSCVAFENQYIPRKARFQYDKNIYRQIEPGTFAYIRNYSKESN-QASFFSLEEY 192 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPIS---KDISIMKFKSYTLQTESANSST 237 ++ + + + + ++ S + + + + + Sbjct: 193 ESGAMTASLEAAEVRFNPETKRWSARRYTTRTFDSLGVETFTQHRNLDTLINLDVNELGR 252 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 N+ L + + + + E H R + I LI + + Sbjct: 253 TDQLIKTMNIVELNQFLEQQRSKGSDSINIIQVEQHARYAYPVGTFILTLIGVSL---SS 309 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL-LMIKK 356 + I I +++ F + F + ++ P + +++ I + + + + + Sbjct: 310 RKVRGGTGLHIGIGIALCFS-YILFIRFFEEFAKSGTLPPWIAVWIPNILYLCIAVYLYR 368 Query: 357 KYTK 360 K K Sbjct: 369 KAPK 372 >gi|300931863|ref|ZP_07147160.1| conserved hypothetical protein [Escherichia coli MS 187-1] gi|331664593|ref|ZP_08365499.1| putative permease [Escherichia coli TA143] gi|300460286|gb|EFK23779.1| conserved hypothetical protein [Escherichia coli MS 187-1] gi|331058524|gb|EGI30505.1| putative permease [Escherichia coli TA143] Length = 359 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 50/360 (13%), Positives = 124/360 (34%), Gaps = 3/360 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + IL+ + + + ++ S N + + Sbjct: 181 DLSLESYIFARSASIEDDKTWILHGVNHKKWLNGKETLETSDNLAWQSAFTSMNLEELSM 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + YR ++L Q + + L+++ Sbjct: 241 PGNTFSVRQL-NHYIHYLQETGQPSSEYRLALWEKLGQPILTLAMILLAVPFTFSAPRSP 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + + + + + + +++ P+ L L + L + Y + Sbjct: 300 --GMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYWYDR 357 >gi|161524006|ref|YP_001579018.1| permease YjgP/YjgQ family protein [Burkholderia multivorans ATCC 17616] gi|189351233|ref|YP_001946861.1| YjgP/YjgQ-like transporter [Burkholderia multivorans ATCC 17616] gi|221199307|ref|ZP_03572351.1| putative membrane protein [Burkholderia multivorans CGD2M] gi|221205791|ref|ZP_03578806.1| putative membrane protein [Burkholderia multivorans CGD2] gi|221211524|ref|ZP_03584503.1| putative membrane protein [Burkholderia multivorans CGD1] gi|160341435|gb|ABX14521.1| permease YjgP/YjgQ family protein [Burkholderia multivorans ATCC 17616] gi|189335255|dbj|BAG44325.1| YjgP/YjgQ-like transporter [Burkholderia multivorans ATCC 17616] gi|221168885|gb|EEE01353.1| putative membrane protein [Burkholderia multivorans CGD1] gi|221174629|gb|EEE07061.1| putative membrane protein [Burkholderia multivorans CGD2] gi|221180592|gb|EEE12995.1| putative membrane protein [Burkholderia multivorans CGD2M] Length = 364 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 52/362 (14%), Positives = 122/362 (33%), Gaps = 16/362 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ I +++ + +S +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTIMLTTMMIRIVGYAASGEVDPKDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT R++E+++ +G S LIKP+ A + + + + Sbjct: 62 VMLVVTLFVSILFVLTRWYRDSEMVVWLASGVSLTRLIKPIGVFATPIIVLITFFAFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + + A+ Q S L F + + + + + + + Sbjct: 122 PWSNQQSRLIKARFQQRDEISLLAPGQFRESASNHRVFFIEKMTPDQSKVQNVFVTSTEN 181 Query: 183 THKIY----YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + + ++L DG + +P + IM+F+ Y ++ S + Sbjct: 182 GKVNVVVSQTGHTETTKDGDRFVVLEDGRRYDGTPGQPNFKIMEFERYGVKITSKPVVNV 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD-KRA 297 ++ L NP +N +EF R L + ++ I A Sbjct: 242 PTTSSTPTPELLRNPTRDNL-----------AEFAWRAGLPLIAINLMVLGIPLAYQNPR 290 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 R + + I L+ S + + I + L++ + I + + + Sbjct: 291 RSRTINLVMAVLIYLTYSNLLNVVQAQIEQGKMSFGVGLVALHVVVAAIVAFIFWLRVRN 350 Query: 358 YT 359 Sbjct: 351 RP 352 >gi|91212393|ref|YP_542379.1| hypothetical protein UTI89_C3401 [Escherichia coli UTI89] gi|218560054|ref|YP_002392967.1| hypothetical protein ECS88_3361 [Escherichia coli S88] gi|237706274|ref|ZP_04536755.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|91073967|gb|ABE08848.1| hypothetical protein UTI89_C3401 [Escherichia coli UTI89] gi|218366823|emb|CAR04593.1| conserved hypothetical protein; putative membrane protein [Escherichia coli S88] gi|226899314|gb|EEH85573.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] Length = 386 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 50/360 (13%), Positives = 128/360 (35%), Gaps = 3/360 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 28 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 87 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 88 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 147 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + + N+ + + ++ + N G+ I RD Sbjct: 148 VASPLQQQALQIKSTATALGEDNDIIGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 207 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + IL+ + + + + ++ S N + + Sbjct: 208 DLSLESYIYARSATIEDDKTWILHGVNYKKWLNGKETLETLDNLAWQSAFTSMNLEELSM 267 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + Y ++L Q + + L+++ ++ R Sbjct: 268 PGNTFSVRQL-NHYIHYLQDTGQPSSEYHLALWEKLGQPILTLAMILLAVPFTF--SVPR 324 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + + + + + + +++ P+ L L + L + Y + Sbjct: 325 SPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYWYDR 384 >gi|294788100|ref|ZP_06753344.1| permease, YjgP/YjgQ family [Simonsiella muelleri ATCC 29453] gi|294484393|gb|EFG32076.1| permease, YjgP/YjgQ family [Simonsiella muelleri ATCC 29453] Length = 355 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 44/360 (12%), Positives = 123/360 (34%), Gaps = 5/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+++ + + L ++ + I +L I V + K +P Sbjct: 1 MKLLTKYLIKRLTVMSCYALLAVLALYSFIDLLSEIGNVGKGNYTGWTAFKYIIMQMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ ++ ++EL +I +G S +I+ +L + + ++ + Sbjct: 61 AYQLMPLATLIGGLLALSQLSSSSELAVIKTSGLSTADIIRIILKFSAIFALATILLGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ + A+ + + + L+ R +++ + N + Sbjct: 121 LAPELGRRADAMKTTAKESSITASVT-GLWLRQGENIVNIAAMLPDNTLTNIRIWRYNPQ 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + A+ + + +L + ++ + + +I +K ++ + +V+ Sbjct: 180 FELTEAIIAEKAQVHDGK--WVLQNAKISQLTNKHINIQHIKQMNWQTNINQNLLNVLVV 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K + S L + Y + +L + ++ L+++ A Sbjct: 238 KPEQMSFSALTR-YIKYLKKNQQQTSAYDVVWWNKLVYPIATMVMSLVALAFTPNSARHS 296 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 I L + F ++ P + + L + + +I K+ T+ Sbjct: 297 NMGLKLFSGICLGLLFFFTGRLFGFTTQLYGVPAFFSAI-LPTATFALWAVYLIHKQETR 355 >gi|158337152|ref|YP_001518327.1| permease YjgP/YjgQ [Acaryochloris marina MBIC11017] gi|158307393|gb|ABW29010.1| permease YjgP/YjgQ, putative [Acaryochloris marina MBIC11017] Length = 390 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 55/358 (15%), Positives = 119/358 (33%), Gaps = 7/358 (1%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQ-ILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y+ R + FL + I + + VS + + I L I +P + Sbjct: 15 LVDRYLFRQLLPPFLWGMVAFSSIGVSAAVLFDLLGQVSEARLPIAIALSILTLQLPYFV 74 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L+ + + ELL + + G LI L ++L +F+F + Sbjct: 75 SLAIPMSVLLACLLTLSRLQSDGELLALQSAGLHLNRLIGSCLGFSLLACLFMFGLTESL 134 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD----LYIKISKYNPNNTLQGIFIVD 177 P ++ L + A FS ++ + + ++ TL GI ++D Sbjct: 135 VPVSQAHSHHLLRQTLQAGQFSLQGRHIVYPDIGPNQELRRLFYAQTGQGQTLSGITVID 194 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 ++ AQS + + +R I DG ++ + I++F LQ S T Sbjct: 195 WTLPNNQQVLIAQSATWNAERNIWIFKDGSIYAIGTDGAEKHIIEFSKQELQLPPQLSLT 254 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPEL--LETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + + + H+++ +IFGL+ Sbjct: 255 DSDINPNGVTLAQSQQLLTKLRQTGRPTQIRALAIQIHRKIALPFTVIIFGLVGSTLGIS 314 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + + I + + + + +P++ + + + LL+ Sbjct: 315 QRRLAVSNGFGISLILVLGQYILIFIADAWGQLGIISPWFGAWTPNLVTGLIGVSLLL 372 >gi|153806356|ref|ZP_01959024.1| hypothetical protein BACCAC_00617 [Bacteroides caccae ATCC 43185] gi|149131033|gb|EDM22239.1| hypothetical protein BACCAC_00617 [Bacteroides caccae ATCC 43185] Length = 365 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 44/362 (12%), Positives = 121/362 (33%), Gaps = 7/362 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPTV 60 K + YI++ +++ + I+ IA V ++++ + + I+ + IP Sbjct: 8 KRLDWYIIKKFLGTYVFAIALIISIAVVFDFNEKMDKLMEHEAPWSKIIFEYYMNFIPYF 67 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +P + + + N+E++ + +TG S +++P + A ++++ F+ + Sbjct: 68 SNLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMMRPYMISAAIIALTTFMLSSY 127 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + PK T + + + + N T + D Sbjct: 128 VIPKGSVTRLNFEDRYIKPKKQNTARNVQLEVDSGVIAYIDNYNNAMKTGNRFSLDKFVD 187 Query: 181 TQTHKIYYAQSGSIDLDR-QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + A+ + D ++D V + + I+ + E ++ + Sbjct: 188 KKLVSHLTARRITYDTATVHKWTIHDYMVRELDGLKEKITKGDKIDSIINMEPSDFLIMK 247 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + L + ++ + E+HKR+ I +I + + Sbjct: 248 NQQEMLTSPQLSDYIEKQKRRGFANIKEFEIEYHKRIAMSFASFILTIIGVSL----SSR 303 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF-CISSIFLLMIKKKY 358 + + + + F I N P++ +++ + + + +K Sbjct: 304 KTKGGMGLHLGIGLGLSFSYILFQTITSTFAINGNVPPVIAVWIPNILYAGIAFFLYQKA 363 Query: 359 TK 360 K Sbjct: 364 PK 365 >gi|258542689|ref|YP_003188122.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-01] gi|256633767|dbj|BAH99742.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-01] gi|256636826|dbj|BAI02795.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-03] gi|256639879|dbj|BAI05841.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-07] gi|256642935|dbj|BAI08890.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-22] gi|256645990|dbj|BAI11938.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-26] gi|256649043|dbj|BAI14984.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-32] gi|256652030|dbj|BAI17964.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655087|dbj|BAI21014.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-12] Length = 399 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 60/362 (16%), Positives = 131/362 (36%), Gaps = 12/362 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + + Y++ + FL++ ++ + ++L NL+++ + I + + L+P L Sbjct: 22 TLDRYLIAQVMPPFLVALSVVMIALILERLLVLFNLLAAGNNHIGIFIGLLAALLPHYLG 81 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + V+ M++N E+ I+++G S + + +P + L ++L + F+ I+ Sbjct: 82 LAIPAALCVAVFTVIRRMSQNEEIDAINSSGLSLLRITRPYIQLGVILGVLSFLLYGFIQ 141 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P R + A L+ +F L I K + + + + Q Sbjct: 142 PHARYDFRSTFYIASHTGWAPRLQPRMFASPSSQLTIVADKVSQSGSDLENVFIRDLSEQ 201 Query: 183 THKIYYAQSGSIDLDRQAII----LNDGEVHRKSPISKDISIMKFKSYTLQTE----SAN 234 + A++G I + L +G + S++ F T + Sbjct: 202 QERDITARNGHIRIGSDGETVEIDLTNGVIVT-DKGDGVPSLVTFDHSTRYLTHASHISP 260 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 T + L+ + RSE H R+ + L L++ A Sbjct: 261 FRTRGEDERELTSPELVGRLIRHDPSISRPH--MRSEVHFRMARSLTVPFMPLLAASLAL 318 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R R + FI + + F F + + ++ + +F + LL+ Sbjct: 319 MRKRQRNNAGLPLAFI-IMVGFDHIIQFGHSMVATKKASLLLIWGPAVVFIVGCTLLLLY 377 Query: 355 KK 356 K Sbjct: 378 KS 379 >gi|288926740|ref|ZP_06420651.1| membrane protein [Prevotella buccae D17] gi|288336470|gb|EFC74845.1| membrane protein [Prevotella buccae D17] Length = 367 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 48/364 (13%), Positives = 114/364 (31%), Gaps = 9/364 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPTV 60 K + YI++ ++ S I+ IA V + ++ + I+ IP Sbjct: 8 KILDWYIIKKFIGTYFFSIALIISIAIVFDFNENLSKFTQYHAPWRAIVFDYYANFIPYY 67 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +P + + + N+E++ + G S L++P + +L++ + Sbjct: 68 SNLFSPLFVFIAVIFFTSKLAGNSEIIAMLAAGVSFKRLMRPYMISCVLIAALTYYLGAY 127 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + A + + + + N G + D Sbjct: 128 EIPHGTVIRQDFEALYRNNTKNTAADNVQLQVDKGVIAYIQHYDNNTKKGYGFKLNKFED 187 Query: 181 TQTHKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A I + + + + + + + I+ K + E + Sbjct: 188 KKLVSDLTAMEVQYDTISDTKFHWRMRNWKQRKLQGLKEHITSGAEKDTVILMEPTDLVY 247 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L + + Y+ E+HKR+ I +I + + Sbjct: 248 SKGQQETFTSPELREYISKQIDRGSSNVVQYQVEYHKRIATSFASFILTVIGLSL---SS 304 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF-LFCISSIFLLMIKK 356 R+ + + L++SFG + + N P+L + + +I + + Sbjct: 305 RKRKGGMGLYLGLGLALSFG-YIMLQTVSATFAINAGAPPMLAAWTPNMVFAIVAYFLYR 363 Query: 357 KYTK 360 K K Sbjct: 364 KAPK 367 >gi|254303140|ref|ZP_04970498.1| possible ABC superfamily ATP binding cassette transporter membrane protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323332|gb|EDK88582.1| possible ABC superfamily ATP binding cassette transporter membrane protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 359 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 54/338 (15%), Positives = 118/338 (34%), Gaps = 1/338 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YIL + +++ FI + ++ + + S+ +L++ + IP + Sbjct: 1 MKIINKYILDELKGPIILAVFVFTFIFLLDIVVTMMEHIIVKGISVFDVLRLLSFYIPPI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + T +RN+E + + +TG S ++KP+L +AI SIF+ + Sbjct: 61 LTQTIPIGMFLGIMICFTKFSRNSESVAMVSTGMSIRDILKPILAIAIGASIFIIFLQES 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P+ +K + AK L+E F D+ I + + + + + I + + Sbjct: 121 IIPRSFIKLKYVGAKIAYENPVFQLKEKTFIDNLDEYSIYVDEVDSDGKAKNIIAFEKPE 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ +IIL + + K + F + + + + Sbjct: 181 DKSKFPMVLTGEEAFWKDNSIILKESQFVSFDETGKKNLVGTFDEKRVVLTAY-FQDLNI 239 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K D +++ Y+ E ++L V +I + + Sbjct: 240 KIKDVEALSIIDLIKGLKKVEATEAIRYKIEIFRKLALVFSTVPLAVIGFCLSLGHHRIS 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 ++ I + + + NP+ Sbjct: 300 KKYSFILAMIIIFAYIIFLNIGIVMATAGKLNPFIATW 337 >gi|323978946|gb|EGB74026.1| permease YjgP/YjgQ family protein [Escherichia coli TW10509] Length = 359 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 49/354 (13%), Positives = 122/354 (34%), Gaps = 3/354 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + IL+ + + + ++ S N + + Sbjct: 181 DLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLETSDNLAWQSAFTSMNLEELSM 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + YR ++L Q + + L+++ Sbjct: 241 PGNTFSVRQL-NHYIHYLQETGQPSSEYRLALWEKLGQPILTLAMILLAVPFTFSAPRSP 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + + + + + + +++ P+ L L + L + Sbjct: 300 --GMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPIAFMLVALSL 351 >gi|90419501|ref|ZP_01227411.1| conserved hypothetical membrane protein [Aurantimonas manganoxydans SI85-9A1] gi|90336438|gb|EAS50179.1| conserved hypothetical membrane protein [Aurantimonas manganoxydans SI85-9A1] Length = 360 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 42/349 (12%), Positives = 111/349 (31%), Gaps = 10/349 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y R SFL + L + + ++I +++ S +P+ + Sbjct: 5 TLNRYFFRLYVVSFLSTLLTVFALIYLIDLIEVSRRSRFEDLGFGATALFSLLRVPSFIG 64 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 PF + L ++NR EL++ +G S ++ P + + L+ I N + Sbjct: 65 QAFPFIVLFSSIYTLLTLNRRLELVVARASGVSIWQILLPFVVGSFLIGIVATFVYNPLT 124 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKI---SKYNPNNTLQGIFIVDSR 179 ++ + + S + + R + D I + T+ G Sbjct: 125 AYTKTLSEDMQTTMTAGGDVSSSDRVPWLRQEGDGIQSILGAKTVARSGTVLGDITAFVM 184 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + + L+ + +L R + + + + Sbjct: 185 NDEGIVKERIDAARAVLNDEYWLLE---KPRVTRVGYRPEFPQEYKLPTSLRPEYVEQRI 241 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 ++ L + + + +R ++H + Q + L++ A Sbjct: 242 ADPEAISIWQLGSK-IDVAASLGFNTDAFRMQYHTLVAQPALFIAMTLLAATVA--TRFS 298 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 R + I + F ++ +++ + N P++ + +++ Sbjct: 299 RTGQSGRTIAGGVMAGFVLYVV-TFLAKALGSNDVVPPVMAAWFPVLAA 346 >gi|329954892|ref|ZP_08295909.1| permease, YjgP/YjgQ family [Bacteroides clarus YIT 12056] gi|328526996|gb|EGF54007.1| permease, YjgP/YjgQ family [Bacteroides clarus YIT 12056] Length = 380 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 51/363 (14%), Positives = 119/363 (32%), Gaps = 7/363 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 +K + YI++ +++ + I+ IA V ++++ S I+ IP Sbjct: 22 LKRLDWYIIKKFLGTYVFAIALIISIAVVFDFNEKMDRFMSHEAPWKAIIFDYYMNFIPY 81 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + +TG S +++P + A +++I F + Sbjct: 82 FANLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMLRPYMVSAAIIAITTFCLGS 141 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + PK T K + + + + T + + Sbjct: 142 YVIPKGSVTRLNFEDKYYKPRKSTTARNIQLEVDSGVIAYIERFEDYSKTGYRFSLDKFK 201 Query: 180 DTQTHKIYYAQSGSIDLDR-QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 D Q A+S + D + D + + + I + L E A+ + Sbjct: 202 DKQLVSHLTARSITYDTAAVHKWKVKDYMIREMDGMRESIVKGERLDTILFMEPADFLIM 261 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + L ++ + E+HKR+ I LI + + Sbjct: 262 KNQQEMLTSPQLSEYIDRQRQRGFANIKEFEIEYHKRIAMSFASFILTLIGVSL----SS 317 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF-CISSIFLLMIKKK 357 + + + + F I N P++ +++ + + + KK Sbjct: 318 KKTKGGMGLHLGIGLGLSFSYILFQTIASTFAVNGNVPPVIAVWIPNLLYAFIAFYLYKK 377 Query: 358 YTK 360 K Sbjct: 378 APK 380 >gi|300725026|ref|YP_003714352.1| putative transmembrane protein, transport [Xenorhabdus nematophila ATCC 19061] gi|297631569|emb|CBJ92278.1| putative transmembrane protein, transport [Xenorhabdus nematophila ATCC 19061] Length = 366 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 59/354 (16%), Positives = 136/354 (38%), Gaps = 19/354 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + N+++ + G +P + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFSQKLVEVLGAAVEGNIPANLVISLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + + +E+ ++ G + L+K L LA+L SI + Sbjct: 62 LILPLSLFLGVLMTFSKLYTESEITVMHACGLGKSVLVKSALILALLTSILAAANVIWFI 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P+ Q+ A A+ + + + E F D + NT + +F+ R T Sbjct: 122 PESSKYQAQVLADAKTNPSLAAIMEGQFKPSRDGNMVLYIGNVKGNTFENVFLAQLRSTN 181 Query: 183 --THKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + +A G + Q +L+ G + + + +D I +F +Y + Sbjct: 182 DQRPSVIFADGGHMEERPNGNQVAVLHQGTRYEGTALLRDFRITEFTNYQAVIGHQRADI 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 K ++L L + ++ R+EFH RLT L +I L+ A Sbjct: 242 DNNKVEQKSLEQLWHATDDDS----------RAEFHWRLTLILSVLIMALM---VVPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + ++ +I + ++ + +F+ + P+ +++L S + L Sbjct: 289 VNPRQGRILSMLPAMLLY-LIFFMLQSSLRSNGSKGKLDPMFWMWLVNGSYLAL 341 >gi|89094619|ref|ZP_01167556.1| hypothetical protein MED92_00300 [Oceanospirillum sp. MED92] gi|89081089|gb|EAR60324.1| hypothetical protein MED92_00300 [Oceanospirillum sp. MED92] Length = 362 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 41/365 (11%), Positives = 113/365 (30%), Gaps = 14/365 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI R + FL+ L + + + +++ + V S ++ +P Sbjct: 1 MSLIDRYIARHVLGGFLVVLLVVAGLDMLFALVEELKDV-QGNYSFAAAVEYVLLTLPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + L + ++EL ++ G S + +I V+ +L+ Sbjct: 60 LYEFIPLSSLIGCLLGLGILASSSELTVMRAAGISTLGIIISVMKPVLLIIALALGLGEF 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + ++ R D + + + D Sbjct: 120 VVPHTEQRAQSHRQVMLTGGGAIHDASRVWHRDDMTFLHINAVIPDGSVRGVTRYEFNED 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD---------ISIMKFKSYTLQTE 231 + +A+ G + + +L D + R + ++ + + Sbjct: 180 LTLKRSSFAEVGRYEDGK--WLLTDIQESRFPDAKGREQRATSSIVTTEIEQEIWESGLT 237 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 ++++ + ++S L+ N + E YR F +L L L+++ Sbjct: 238 PDLLKVVMVQPTNLSISGLVQ-YSNYLTDQGLASEQYRIAFWNKLLLPLAIFALVLVAVS 296 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + I + + F + + ++ ++ + + + Sbjct: 297 FIFGPLRSVTLGQRLITGIIVGLVFKLSQDILGPTSAVFGFYPFVAVM-IPILICIGVGF 355 Query: 352 LMIKK 356 ++ + Sbjct: 356 WLLNR 360 >gi|84622419|ref|YP_449791.1| hypothetical protein XOO_0762 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188578606|ref|YP_001915535.1| putative permease, YjgP/YjgQ family [Xanthomonas oryzae pv. oryzae PXO99A] gi|84366359|dbj|BAE67517.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188523058|gb|ACD61003.1| putative permease, YjgP/YjgQ family [Xanthomonas oryzae pv. oryzae PXO99A] Length = 368 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 43/363 (11%), Positives = 104/363 (28%), Gaps = 11/363 (3%) Query: 5 ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 + Y+ R + + L++ ++ + V + + + + Y +P + Sbjct: 9 DWYVGRVVLSTVLLTWAVLLGLDLVNAFASEAKDIGQGSYTFGHAVAYVAYTVPRRAYTL 68 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P + L + +EL + G SR + V+ LL+ + IS I P Sbjct: 69 FPTAAVIGALMGLGQLAATSELTALRALGVSRKRMSASVVAAMALLTASMVISGETIGPW 128 Query: 125 CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKI--------SKYNPNNTLQGIFIV 176 ++ L A A+ + + + D ++ + L + + Sbjct: 129 AQNQADTLKASARYNSDMAASLYAGLWAREGDTFLNALSGEEKLLDGGDTALDLHDVRLY 188 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + S + D L S + Q A + Sbjct: 189 HLDSSGRMQQLTYASVAEHRDG-RWTLRQVRRDTFQERSVQRETFPELPWQSQLNPAALA 247 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + K + + L + + Y ++ R L + + +I + Sbjct: 248 AGLAKPRNLSAHDL-EQSIEYRSRNGLDARDYEDQYWSRWFYPLNVLALCMAAIPFSFGS 306 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 K + I ++ F + F Y L + + + ++ Sbjct: 307 LRSGGLGKRLFLGILFALGFWLLQLFFG-RMAGALKLDYRIAYALPPMVMLGVSAWLFRR 365 Query: 357 KYT 359 + + Sbjct: 366 RSS 368 >gi|288928388|ref|ZP_06422235.1| membrane protein [Prevotella sp. oral taxon 317 str. F0108] gi|288331222|gb|EFC69806.1| membrane protein [Prevotella sp. oral taxon 317 str. F0108] Length = 390 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 47/361 (13%), Positives = 118/361 (32%), Gaps = 8/361 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 +K + YI+R +++ S L I+ IA V + + + + L I+ +P Sbjct: 30 LKILDWYIIRKFIGTYVFSILLIISIAIVFDVNENLAKFTQFHAPLKAIVFDYYANFVPY 89 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + +E++ + G S L++P + +L+S F Sbjct: 90 FANLFSPLFVFIAVIFFTSKLAGTSEIISMLAAGVSFNRLMRPYMVSCLLISCLSFYLSG 149 Query: 120 IIEPK---CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + P R + + ++ + ++ + + + K Sbjct: 150 YVIPHGTVIRQNFESMYKNSKKNTSAENVQLQVDRGVIAYIQHYDDKTKRGYGFSLDKFE 209 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + Q +I + +++ + + + I+ + + E A+ Sbjct: 210 NKKLVSHMTASEIQYDTISDSKYHWQVSNWRIREMKALREKITYGDKRDTLIMMEPADLV 269 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + + Y E+HKR+ I I + Sbjct: 270 FSKGQQETFTNPELSSYISKQIGRGSSNVVQYEVEYHKRIAASFASFILTTIGLSL---S 326 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + R+ + I L++SFG + + N P+L ++ + + Sbjct: 327 SRKRKGGMGLYLGIGLALSFG-YILLQTVSATFAVNANTPPMLAAWIPNLLFAVVAYFCY 385 Query: 357 K 357 + Sbjct: 386 R 386 >gi|254303141|ref|ZP_04970499.1| hypothetical protein FNP_0781 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323333|gb|EDK88583.1| hypothetical protein FNP_0781 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 363 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 53/362 (14%), Positives = 117/362 (32%), Gaps = 11/362 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K ++YI + + FLM+ + + + + Q + I ++ + + L+P + Sbjct: 3 KKMDMYISKYFIKFFLMNIIGFMGVFLLAQTFKIIKYINQGKLAGGEIFDYILNLLPKMF 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + ++ M N E++ + +G + +++ L +A ++S+F+F N I Sbjct: 63 VETAPLSVLLAGLITVSIMASNLEIVSLKTSGIRFLRIVRAPLIIAFVISLFVFFINNSI 122 Query: 122 EPKCRSTIKQLSA-----KAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 K + I +L T L KI++ I Sbjct: 123 YTKSLAKINFYRRGEVDETLKLPTTKENAFFINNTDGYLYLMGKINRETGVAENIEIVKF 182 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 ++ ++ +I A+S D + I ++ ++ + S Sbjct: 183 ENEISKPKEIITAKSAKFDTEENKWIFSNANIYNVDTKETVTKTEYKSNLYKDDPSNFIR 242 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L N E Y +E KR + I I + Sbjct: 243 ASAEDPRMLTIKELKKTIKEQKNI-GEDTRIYLAELAKRYSFPFASFIVAFIGLSV--SS 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMI 354 VR + + I + +G + S + N P + ++ I + + Sbjct: 300 KYVRGGRTTMNLVICVVAGYGYYLV-SGAFEAMSLNGILNPFIASWIPNILYLIIGIYFM 358 Query: 355 KK 356 + Sbjct: 359 NR 360 >gi|301325677|ref|ZP_07219138.1| conserved hypothetical protein [Escherichia coli MS 78-1] gi|300847532|gb|EFK75292.1| conserved hypothetical protein [Escherichia coli MS 78-1] Length = 359 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 49/354 (13%), Positives = 121/354 (34%), Gaps = 3/354 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L + +N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLAKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + IL+ + + + ++ S N + + Sbjct: 181 DLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLETSDNLAWQSAFTSMNLEELSM 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + YR ++L Q + + L+++ Sbjct: 241 PGNTFSVRQL-NHYIHYLQETGQPSSEYRLALWEKLGQPILTLAMILLAVPFTFSAPRSP 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + + + + + + +++ P+ L L + L + Sbjct: 300 --GMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPIAFMLVALSL 351 >gi|294012649|ref|YP_003546109.1| putative permease [Sphingobium japonicum UT26S] gi|292675979|dbj|BAI97497.1| putative permease [Sphingobium japonicum UT26S] Length = 367 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 47/358 (13%), Positives = 116/358 (32%), Gaps = 7/358 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTV 60 + Y+ R +V + + +L + + L P + Sbjct: 10 RQLGWYMARLFLTRTFAVLAMLVAVLQTLDLLGESGDILAYAGNGDAQLWHYVALRAPQI 69 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + PF + T +L S+N+N+E++ + G S ++ P+L A+ +++ + Sbjct: 70 VARFLPFSVLLGTLIMLASLNQNSEIISMKAAGLSAHQILAPLLAAALGVALISYAFNER 129 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD---LYIKISKYNPNNTLQGIFIVD 177 I + + + A L + + D + ++ L+ + I + Sbjct: 130 IVARSTARLSAWQAVDYGPLPPETGVKASPWVRDGNNLVTAAIVAGRGTAVQLRKVEIFN 189 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + I A G D ++ +L D + + + + Sbjct: 190 RINNTLTTIVQAPRGHYDASTRSWVLEDA--RQFDVARGTERQIGTVRFGRDIRPDQFTL 247 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + S L ++ + +L+ L ++ ++ VAA A Sbjct: 248 AKVDPDALTFSQL-QAAISDLHDAGRPTAELEGSLWHKLSGPLSALLMPILGSVAAFGLA 306 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 Q + ++L ++ V FS + + P ++ FL + ++ + Sbjct: 307 RSGQLFVRAVLGMALGFAYFVADNFSLAMGNLGAYPPFLAAWAPFLLFLLVGETVLFR 364 >gi|37681090|ref|NP_935699.1| permease [Vibrio vulnificus YJ016] gi|37199840|dbj|BAC95670.1| predicted permease [Vibrio vulnificus YJ016] Length = 366 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 47/360 (13%), Positives = 119/360 (33%), Gaps = 23/360 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + Q + + S ++++ I +P++ Sbjct: 2 IIVRYLIRETLKSQFAIFFVLFLVFLSQQFISVLADASDGDIPASLIMSIVALNMPSMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+++++ TG LI+ L+LA++ S + + Sbjct: 62 LMLPLSLYIGILITFGRLYAESEIVVMNATGIGNKFLIQAALYLAVITSGVAAFNSLWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++QL+ + + L++ F D + + L +F+ Sbjct: 122 PWSMDRVEQLTEQVAAENSVDLLKKGQFQFTPDRSSVVFIDDIKDKQLSNVFVAQLMPRD 181 Query: 183 THKIYYA-----QSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + + RQ I + G + P + I +F+ Y + Sbjct: 182 SILPSVMFANGGEVKELSDGRQIISMKQGTRYEGVPTRVEYMITEFEQYDGLIGQRSVKQ 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L+ ++E R++ + V L++++ A Sbjct: 242 RGRDWDAIPTLELI----------GNPDPEAQAELQWRVSLF---VCIPLLTMLVIPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-----NPYYIPILYLFLFCISSIFLL 352 + ++ + + ++ I F S +E+ + PI L L + Sbjct: 289 VNPRQGRFAKMGPAILIYLAYFLSISATKSALEEGDISASIGMWPINGLLLLVAIMANFM 348 >gi|197287278|ref|YP_002153150.1| permease [Proteus mirabilis HI4320] gi|227357022|ref|ZP_03841393.1| inner membrane protein [Proteus mirabilis ATCC 29906] gi|194684765|emb|CAR46795.1| putative permease [Proteus mirabilis HI4320] gi|227162825|gb|EEI47785.1| inner membrane protein [Proteus mirabilis ATCC 29906] Length = 359 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 45/337 (13%), Positives = 111/337 (32%), Gaps = 2/337 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI R I +S LM+ +V ++ +I+ + ++ V + + I + + Sbjct: 5 LDKYIGRTILQSILMTLFLLVSLSGIIKFVDQLRKVGQGDFTTLDAGIYAVLNILKDVQI 64 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L ++ +EL+++ +G +R+ + V+ AI L + + P Sbjct: 65 FFPMAALLGALLGLGALATRSELVVMQASGFTRLQIAGSVMKTAIPLVLLTVLIGEWGAP 124 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+ + + ++ + + + N + + Sbjct: 125 QGEQYARNYRAEKIMGNSLVSTNRGMWAKDGNQFIYINRIKSQNEMQGITLYNFDNNRKL 184 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKS-PISKDISIMKFKSYTLQTESANSSTIVLKA 242 + YA S + D D++ +L E + P + + S + L Sbjct: 185 ETVRYASSATYDPDKKVWLLKQVEQSDLTSPQKITGKKQVSLEWQTRLTPEKLSVVALDP 244 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S L + Y F K++ + + L+++ Sbjct: 245 DALSISGLYQ-YVKYLKQSGQESANYELNFWKKIFAPISVAVMMLMALSFIFGPLRTVPM 303 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL 339 I+ F + S + + P + L Sbjct: 304 GLRVVTGIAFGFLFYIVNEVSGRLSLVYGIPAVVAAL 340 >gi|237741964|ref|ZP_04572445.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13] gi|229429612|gb|EEO39824.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13] Length = 363 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 53/362 (14%), Positives = 118/362 (32%), Gaps = 11/362 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K ++YI + + FLM+ + + + + Q + I ++ + + L+P + Sbjct: 3 KKMDMYISKYFIKFFLMNIIGFMGVFLLAQTFKIIKYINQGKLAGGEIFDYILNLLPKMF 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + ++ M N E++ + +G + +++ L +A ++S+ +F N I Sbjct: 63 VETAPLSVLLAGLITVSIMASNLEIVSLKTSGIRFLRIVRAPLIIAFVISLIVFFINNSI 122 Query: 122 EPKCRSTIKQLSA-----KAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 K + I +L T L KI++ + Sbjct: 123 YTKSLAKINFYRRGEVDESLKLPTTKENAFFINNTDGYLYLMGKINRETGMAENIEVIKF 182 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 +++ ++ +I A+S D+D I ++ ++ S Sbjct: 183 ETQISKPKEIITAKSAKFDIDENKWIFSNVNIYNVDTKETVTKTEYKSDLYKDDPSNFIR 242 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L N E Y +E KR + I I + A Sbjct: 243 ASAEDPRMLTIKELKKTIKEQKNI-GEDTRIYLAELAKRYSFPFASFIVAFIGLSA--SS 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMI 354 VR + + I + +G + S + N P + ++ I + + Sbjct: 300 KYVRGGRTTMNLVICVVAGYGYYLV-SGAFEAMSLNGIVNPFVASWIPNILYLIIGIYFM 358 Query: 355 KK 356 + Sbjct: 359 NR 360 >gi|86133725|ref|ZP_01052307.1| predicted permease YjgP/YjgQ family [Polaribacter sp. MED152] gi|85820588|gb|EAQ41735.1| predicted permease YjgP/YjgQ family [Polaribacter sp. MED152] Length = 363 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 54/363 (14%), Positives = 114/363 (31%), Gaps = 6/363 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILL-KISGYLIP 58 MK + YIL+ +FL + L ++ IA I I ++I+ ++ + I Sbjct: 1 MKILDWYILKRFLVTFLFTLLILIPIAIAIDIAEKIDNFLEHQDLGFLQIVDEYYINFII 60 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 P + + ++ NTE++ I+N S + P A L+++ Sbjct: 61 YYANTFMPLALFIAVILFTSKLSNNTEIIAINNAKISFTRFLFPYFIGATLITLLSLAMN 120 Query: 119 NIIEP---KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI 175 + + P K R + K + + +L D YI I +N + F Sbjct: 121 HFVVPSSSKIRKKFELTYIKNKRQNQEFKYISDFSLQLTDSTYIFIRNFNTQSNAGYDFT 180 Query: 176 -VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 A + + L + + + I + Sbjct: 181 SEVYDGLTMKSKLVADNIRYNDKDSTFALQNWRLRKIYDDKDSIFSGNKIDTVFNFTPRD 240 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + + LL + + L Y EFHKR + + + +I++ A Sbjct: 241 LIYKSALSQEMPSDELLKFIEISEKRGVKNLNAYLVEFHKRTSLPIASYVLTIIAVALAF 300 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 ++ + + I + + N + + F +++L + Sbjct: 301 RKRRGGTGVNLAIGVGMMFIYVFLLKISEVLGAVAGVNSFIYVWMPNIFFGSIALYLYLN 360 Query: 355 KKK 357 +K Sbjct: 361 ARK 363 >gi|226946454|ref|YP_002801527.1| YjgP/YjgQ family permease [Azotobacter vinelandii DJ] gi|226721381|gb|ACO80552.1| permease YjgP/YjgQ family [Azotobacter vinelandii DJ] Length = 356 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 37/360 (10%), Positives = 114/360 (31%), Gaps = 7/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ E Y+L + F + ++ + + ++ ++ + + L L+++ +P Sbjct: 1 MRILERYLLGNLLLGFAAAAALLLPLFSTLDLVGELDDIGDAGYRLGQALQVTLMTLPRR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + PF + L ++ + EL ++ G S + L LL+ L + Sbjct: 61 AVELGPFIALLGGIAALGQLSMSQELSVLRTAGVSATRIGLTALLAGTLLAGGLGALDEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + + K + +++ + D ++I + I + Sbjct: 121 VASPLQQK----AIKLRAYAKPDNDKDDSIWARKDGQVVRIGSLATGRVPNHLEIFRFDE 176 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + L+D + R S + + ++ + + + L Sbjct: 177 SNRLQEYILADRAEIQPGGLWQLHDVRLKRWSDEGESVERLERLEWRAILPDSRLDEVTL 236 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + L + + + ++L + + L ++ R Sbjct: 237 PPASLSARQL-RGYVHFLQNTGQPSIQFEIALWQKLGVPILTLAMILFALPFTFAPV--R 293 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + + + V+ G ++ + ++ L + L + +++ + Sbjct: 294 STGLGSRLALGAVMGLLVYIGNESLVSLGQLLKLNAMLVGLLPALVLLGMALALVRRFDR 353 >gi|194436708|ref|ZP_03068808.1| putative permease, YjgP/YjgQ family [Escherichia coli 101-1] gi|256024435|ref|ZP_05438300.1| hypothetical protein E4_13754 [Escherichia sp. 4_1_40B] gi|194424190|gb|EDX40177.1| putative permease, YjgP/YjgQ family [Escherichia coli 101-1] Length = 359 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 49/360 (13%), Positives = 124/360 (34%), Gaps = 3/360 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + IL+ + + + ++ S + + + Sbjct: 181 DLSLESYIFARSASIEDDKTWILHGVNHKKWLNGKETLETSDNLAWQSAFTSMDLEELSM 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + YR ++L Q + + L+++ Sbjct: 241 PGNTFSVRQL-NHYIHYLQETGQPSSEYRLALWEKLGQPILTLAMILLAVPFTFSAPRSP 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + + + + + + +++ P+ L L + L + Y + Sbjct: 300 --GMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLMALSLVYWYDR 357 >gi|218131075|ref|ZP_03459879.1| hypothetical protein BACEGG_02679 [Bacteroides eggerthii DSM 20697] gi|217986779|gb|EEC53112.1| hypothetical protein BACEGG_02679 [Bacteroides eggerthii DSM 20697] Length = 380 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 50/363 (13%), Positives = 118/363 (32%), Gaps = 7/363 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 +K + YI++ +++ + I+ IA V ++++ S I+ IP Sbjct: 22 LKRLDWYIIKKFLGTYVFAIALIISIAVVFDFNEKMDRFMSHEAPWEAIIFDYYMNFIPY 81 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + +TG S +++P + A ++++ F + Sbjct: 82 FANLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMLRPYMVSAAIIAVTTFCLGS 141 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + PK T K + + + + T + + Sbjct: 142 YVIPKGSVTRLNFEDKYYKPRKSTTARNIQLEVDSGVIAYIERFEDYSKTGYRFSLDKFK 201 Query: 180 DTQTHKIYYAQSGSIDLDR-QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 D Q A+S + D + D + + + I + L E A+ + Sbjct: 202 DKQLVSHLTARSITYDTATVHKWTVKDYMIREMDGMRESIVKGEKMDTILFMEPADFLIM 261 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + L ++ + E+HKR+ I LI + + Sbjct: 262 KNQQEMLTSPQLSEYINRQRQRGFANIKEFEIEYHKRIAMSFASFILTLIGVSL----SS 317 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF-CISSIFLLMIKKK 357 + + + + F I N P + +++ + + + KK Sbjct: 318 KKTKGGMGLHLGIGLGLSFSYILFQTIASTFAVNGNVPPFIAVWIPNLLYAFIAFYLYKK 377 Query: 358 YTK 360 K Sbjct: 378 APK 380 >gi|317153285|ref|YP_004121333.1| permease YjgP/YjgQ family protein [Desulfovibrio aespoeensis Aspo-2] gi|316943536|gb|ADU62587.1| permease YjgP/YjgQ family protein [Desulfovibrio aespoeensis Aspo-2] Length = 388 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 64/360 (17%), Positives = 131/360 (36%), Gaps = 10/360 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK I + + + F ++ ++ + + ++LQ +L S +L++ YL P Sbjct: 1 MKLLHRQIFKELLKLFGLTVACLLGLILIGRMLQLRSLFLSQNIGFFNILQLFFYLTPFF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++TP + M+ + EL + G S ++ + +L ++F F Sbjct: 61 LLLITPIATMLSVFLTFLRMSTDNELTALKANGVSLYRMLPAPIAFCVLCTLFTFFISMW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 K + + + L+ +F + + + + + L+ +F+ D Sbjct: 121 GLAWGMDMFKTSLYQFARSHSRFALQPGVFNKEFPGITFYAHQVDNDTGELKFVFVRDQS 180 Query: 180 DTQTHKIYYAQSGSIDLD----RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA-- 233 + + A I I+ N G ++R+S +I S L Sbjct: 181 ISGASVVVVAPEARIVSSPKTAEVHIVFNKGRIYRQSGEDINILRFGSYSVRLDLGKLLG 240 Query: 234 NSSTIVLKANDQN---LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 + S KA D L + N P + L +E++KRLT L +I G+ +I Sbjct: 241 DFSFSEEKAKDMTFAALREIRNDPSIAPQQTAQFLRKVDTEYYKRLTLPLGCLILGMFAI 300 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 A +RQ+ + + + +F + P Y L+ + ++F Sbjct: 301 PIAYVFRGLRQQYGLLLSMGLFLLYYSMFSLSVSLGEAGAIAPVYGLWAPNILYVLVAVF 360 >gi|256845304|ref|ZP_05550762.1| conserved hypothetical protein [Fusobacterium sp. 3_1_36A2] gi|256718863|gb|EEU32418.1| conserved hypothetical protein [Fusobacterium sp. 3_1_36A2] Length = 363 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 53/362 (14%), Positives = 117/362 (32%), Gaps = 11/362 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K ++YI + + FLM+ + + + + Q + I ++ + + L+P + Sbjct: 3 KKMDMYISKYFIKFFLMNIIGFMGVFLLAQTFKIIKYINQGKLAGEEIFDYILNLLPKMF 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + ++ M N E++ + +G + +++ L +A ++S+ +F N I Sbjct: 63 VETAPLSVLLAGLITVSIMASNLEIVSLKTSGIRFLRIVRAPLIIAFVISLIVFFINNSI 122 Query: 122 EPKCRSTIKQLSA-----KAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 K + I +L T L KI++ + Sbjct: 123 YTKSLAKINFYRRGEVDESLKLPTTKENAFFINNTDGYLYLMGKINRETGMAENIEVIKF 182 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 ++ ++ +I A+S D+D I ++ ++ S Sbjct: 183 ETEISKPKEIITAKSAKFDIDENKWIFSNVNIYNVDTKETVTKTEYKSDLYKDDPSNFIR 242 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L N E Y +E KR + I I + A Sbjct: 243 ASAEDPRMLTIKELKKTIKEQKNI-GEDTRIYLAELAKRYSFPFASFIVAFIGLSA--SS 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMI 354 VR + + I + +G + S + N P + ++ I + + Sbjct: 300 KYVRGGRTTMNLVICVVAGYGYYLV-SGAFEAMSLNGIVNPFVASWIPNILYLIIGIYFM 358 Query: 355 KK 356 + Sbjct: 359 NR 360 >gi|154707760|ref|YP_001424260.1| hypothetical membrane spanning protein [Coxiella burnetii Dugway 5J108-111] gi|154357046|gb|ABS78508.1| hypothetical membrane spanning protein [Coxiella burnetii Dugway 5J108-111] Length = 355 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 47/358 (13%), Positives = 111/358 (31%), Gaps = 4/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI I + + L ++ I ++ + +++ + L +P+ Sbjct: 1 MPLLNRYIRNAIITATALVMLVLLGIEMFMEFIGQLSQIGLVHYGLGQAFLYVLTQLPSD 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L + ++EL+++ G S + V+ A+L+ + + + Sbjct: 61 LYQLFPMAGFLGCLIGLGRLASSSELMVMRTAGVSIAGVTWAVVKAALLMMVAMTFIGEV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P+ ++ ++ A +++ S N + + Sbjct: 121 IAPQIEASGEETKLTALSKAVGYKALGDVWLHGAQSFIHIGSVDAKNKISEVSQFFINNK 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 Q YA G IL + + + +P + T+ + Sbjct: 181 HQLLSAVYAPKGEYVKG--HWILYNVKQTQFTPNRTTEKKIAKFPLTIVFNPDHLQQGRK 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + Q++ L + Y F +R Q L V+ + + Sbjct: 239 MVDRQSIVGLYH-TIRYRQQAGLQTSRYVFAFWQRFIQPLTTVVMICLGVPFIFGSLRQA 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSY-IIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I + +F + F + P + ++ LF + + LL ++ Sbjct: 298 SMGLRILTGIVIGFAFYMLNQFFGPFAMVYQIPPIFAALMPTVLFAVGCVILLRYSRR 355 >gi|121611823|ref|YP_999630.1| permease [Verminephrobacter eiseniae EF01-2] gi|121556463|gb|ABM60612.1| permease YjgP/YjgQ family protein [Verminephrobacter eiseniae EF01-2] Length = 369 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 54/370 (14%), Positives = 123/370 (33%), Gaps = 15/370 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWV---IQILQRINLVSSSTESLNILLKISGYLI 57 MK+ I R + + + + I L+ + L L+ L I Sbjct: 1 MKTIRRLIHREALSAVCFVTAGFLALFFFFDLIDELRWVGLAGREGYHLSHALLFVALGI 60 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 P+ L + P + T V+ + +++E I+ +G ++ +L L + F Sbjct: 61 PSHLYELLPITVLIGTIFVMARLAQSSEFTIMRTSGMGPWRALRTLLTLGGFFVLLTFAV 120 Query: 118 ENIIEPKCRSTIKQLSAKAQLALTFSYLEEN-LFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + + P T +++ A A LT + + + PN ++ + I Sbjct: 121 GDYLAPWTDRTAQRIKAHALGGLTSGATGAWLKERQDRHSFAVNVRALTPNGGMRDVRIF 180 Query: 177 DSRDTQTHKIYYAQS-GSIDLDRQAIILNDGEVHRKSPISKDISIMKFK-----SYTLQT 230 + D + G D + +D + ++ + + Sbjct: 181 EFDDQGRLVTQTRATVGRFATDGAWELAQVRRSRFARGDGQDDARVEHLDAPALRWPTRI 240 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 + + +LK + L + N + + Y EF ++L L ++ ++++ Sbjct: 241 SADMVAASLLKPDRMATLDLFQ-FIRHLNANGQSTQRYAIEFWRKLFYPLSCLVMVVLAL 299 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYY---IPILYLFLFCI 346 A + ISF + F Y + +P+ P L L + Sbjct: 300 PFAYLHLRSGGTAGYVFGGVMAGISFFLLNNVFGYAGNLQNWSPWLTAAAPGLIYSLLSL 359 Query: 347 SSIFLLMIKK 356 ++ L++++ Sbjct: 360 AAFGWLVLRR 369 >gi|171316728|ref|ZP_02905940.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria MEX-5] gi|171098078|gb|EDT42893.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria MEX-5] Length = 363 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 52/363 (14%), Positives = 123/363 (33%), Gaps = 15/363 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ I +++ + +S +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTIMLTTMMIRIVGYAASGEIDPRDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT R++E+++ +G S LIKP+ A + + + + Sbjct: 62 VMLVVTLFVSILFVLTRWYRDSEMVVWLASGVSLTRLIKPIGVFATPIILLIAFFAFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P K + A+ Q S L F + + + + + + + Sbjct: 122 PWSNQQSKMIKARFQQRDEISLLAPGQFRESASNHRVFFIEKMSPDQSKVQNVFVTSTEN 181 Query: 183 THKIY---YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + ++L DG + +P + IM+F+ Y ++ S + + Sbjct: 182 GKVNIVVSHTGHTETKDGDRFVVLEDGRRYDGTPGQPNFKIMEFQRYGVKITSTPVTNVP 241 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD-KRAL 298 + L NP +N +EF R L + ++ I + Sbjct: 242 TTNSTPTPDLLRNPTRDNL-----------AEFAWRAGLPLIAINLMVLGIPLSYQNPRR 290 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 R + + I L+ S + + I + L++ + I ++ + + Sbjct: 291 SRTINLVMAVLIYLTYSNLLNVVQAQIEQGKMSFGVGLVGLHVIVAAIVALIFWLRVRNR 350 Query: 359 TKI 361 + Sbjct: 351 PLL 353 >gi|16125407|ref|NP_419971.1| hypothetical protein CC_1155 [Caulobacter crescentus CB15] gi|221234150|ref|YP_002516586.1| hypothetical protein CCNA_01213 [Caulobacter crescentus NA1000] gi|13422473|gb|AAK23139.1| conserved hypothetical protein [Caulobacter crescentus CB15] gi|220963322|gb|ACL94678.1| hypothetical membrane spanning protein [Caulobacter crescentus NA1000] Length = 353 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 110/352 (31%), Gaps = 10/352 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK +LY+LR + L + L ++ + ++ +L + + + + + +P + Sbjct: 1 MK-LQLYVLRTVATRILGAALILMSVLQILDLLDVTSDILDRGLGMAGVGYYAALRLPRL 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 V P + + R + ++ + +G S ++ + A+ + + + + Sbjct: 60 FEQVAPIAVLAGGLFAFSQLARESAIVAMRASGISGYRIVGMAVPAAVAVMLLDALCGQV 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ T+ F DL I + T+ G+ I Sbjct: 120 LAPRADPTLADWWRNTTPVAERKEPVPRTFR-AGADLVIGANASADGRTITGVTIFRRDS 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + D +A L + R + S S+ + + Sbjct: 179 KGILVEKVEAPAA-RYDGKAWTLEQPKTTRFAGDLSQASTAAATSWPTALRPQDVQGLFG 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRS-EFHKRLTQWLFPVIFGLISIVAADKRALV 299 D ++ + N + E++ + ++ L+S A Sbjct: 238 ---DDSMPTAASARRALENGGSDRPESFYATHLQAAFASPFVSLVMLLLSAPVALANFRS 294 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 Q + ++ + F V + ++ + ++ P L ++ L Sbjct: 295 GQGAVLLTGGLAAGLMFLV---ANGMLTALGESGALTPFLAVWAAPAIFGAL 343 >gi|167763060|ref|ZP_02435187.1| hypothetical protein BACSTE_01426 [Bacteroides stercoris ATCC 43183] gi|167699400|gb|EDS15979.1| hypothetical protein BACSTE_01426 [Bacteroides stercoris ATCC 43183] Length = 380 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 51/363 (14%), Positives = 119/363 (32%), Gaps = 7/363 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 +K + YI++ +++ + I+ IA V ++++ S I+ IP Sbjct: 22 LKRLDWYIIKKFLGTYVFAIALIISIAVVFDFNEKMDRFMSHEAPWQAIIFDYYMNFIPY 81 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + +TG S +++P + A +++I F + Sbjct: 82 FANLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMLRPYMVSAAIIAITTFCLGS 141 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + PK T K + + + + T + + Sbjct: 142 YVIPKGSVTRLNFEDKYYKPRKSTTARNIQLEVDSGVIAYIERFEDYSKTGYRFSLDKFK 201 Query: 180 DTQTHKIYYAQSGSIDLDR-QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 D Q A+S + D + D + + + I + L E A+ + Sbjct: 202 DKQLVSHLTARSITYDTAAVHKWKVKDYMIREMDGMRESIVKGERLDTILFMEPADFLIM 261 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + L ++ + E+HKR+ I LI + + Sbjct: 262 KNQQEMLTSPQLSEYIDRQRQRGFANIKEFEIEYHKRIAMSFASFILTLIGVSL----SS 317 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF-CISSIFLLMIKKK 357 + + + + F I N P++ +++ + + + KK Sbjct: 318 KKTKGGMGLHLGIGLGLSFSYILFQTIASTFAVNGNVPPVIAVWIPNLLYAFIAFYLYKK 377 Query: 358 YTK 360 K Sbjct: 378 APK 380 >gi|88810917|ref|ZP_01126173.1| permease YjgP/YjgQ [Nitrococcus mobilis Nb-231] gi|88791456|gb|EAR22567.1| permease YjgP/YjgQ [Nitrococcus mobilis Nb-231] Length = 367 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 46/344 (13%), Positives = 100/344 (29%), Gaps = 4/344 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ E Y++R + F+++ ++ + I ++++++ G ++P Sbjct: 8 MKTAERYLMRAVAGGFVVAAAVLLPLFSFIDLIEQLDDTGQGNYHSAQAFAYVGLILPRR 67 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN- 119 L + PF + TT L + + EL + + G S + L +LL + L + Sbjct: 68 LIELGPFIALLGTTVALGGLASHRELTALRSVGVSPGGIALAALKAGVLLILLLAAIDQL 127 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P + + + D +++ I I Sbjct: 128 VASPLQQHAFGMRATALSGDSNAESGSGAALWARRGDRLLRVGALRLGRIPADIEIFHFN 187 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 Y + R LN V + + + A + Sbjct: 188 AEGHLVRYIHADYAEIHHRAPWRLNTVLVKAFMAGTPVTTRHASMVWQTFLTPAQIGLLE 247 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 A + L + Y ++L L L+++ + Sbjct: 248 KPAESLSPVQLY-GYVQYLRSTGQSSAVYAVMLWQKLGLPLTAAAMILLAVPFSIGAP-- 304 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 R I + GV+ I++ P++ L Sbjct: 305 RGASIGSRIALGAIAGLGVYLADQIIVNMGLLLDLSPPLIALGP 348 >gi|323144744|ref|ZP_08079321.1| lipopolysaccharide export system permease protein LptG [Succinatimonas hippei YIT 12066] gi|322415495|gb|EFY06252.1| lipopolysaccharide export system permease protein LptG [Succinatimonas hippei YIT 12066] Length = 355 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 44/359 (12%), Positives = 117/359 (32%), Gaps = 7/359 (1%) Query: 1 MK--SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIP 58 MK + YI + + + L+ + + +I + ++ + + L+ +P Sbjct: 1 MKFGILDRYIGKNVFFTILLVTFCLTLLTTLITFVDQMRYIGRGSVDFLFLVSHVALEVP 60 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 ++ + P + L ++ R +EL+++ + G SR ++ L I L + + Sbjct: 61 GIVVLFFPVAVLLGGVIALGNLARTSELIVMQSIGISRTGIVLSALKTVIPLILVIVCLG 120 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 + P+ + A S + L+ R I + + IV Sbjct: 121 EFVVPRVEQYAENRLNFASSNGNLSVTNDGLWLREGHSF---IGIRYTMSDGSLLDIVRY 177 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + ++++ S ++ D + + + + ++L + Sbjct: 178 EVEGKNLKAFSRAKSGVYSDGKWVMRDVRKTVFAENKVIRTSLAEEKWSLNLTPERVEVV 237 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 +K + L++ N + +YR E + + L ++ L++ Sbjct: 238 GVKGYNLTARGLID-YINYLEENNQDASSYRLELYNKFMSPLTMIVMLLLAASTVFGPLR 296 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I+L F + + P + L + + ++++K Sbjct: 297 SMTMGARVLAGIALGFGFYLANQIGAPFALVYGIPPILGA-SLPTLVFMLLAIALLRRK 354 >gi|190150428|ref|YP_001968953.1| hypothetical protein APP7_1159 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303250152|ref|ZP_07336354.1| permease [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303253325|ref|ZP_07339474.1| permease [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|189915559|gb|ACE61811.1| hypothetical protein APP7_1159 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302648007|gb|EFL78214.1| permease [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302651215|gb|EFL81369.1| permease [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 367 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 53/361 (14%), Positives = 121/361 (33%), Gaps = 15/361 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + I +S L ++ + + Q++ +N S +++L + G +P + Sbjct: 2 ILSRYLTKEIFKSQLAILFILLLMFFSQQLITVLNSAVSGKVPTDLVLSLLGLGMPALAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + L +E+ ++ G + L K FL+I + + + Sbjct: 62 FMLPLSLFVALLLTLGRFYAESEITVMRACGIGKSLLTKVAFFLSIFTTALAVYNVFWLT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD--SRD 180 P + ++ A+A+ FS L F + + N N L I++ + Sbjct: 122 PWAINKQSEMLAEAKSNPRFSALSAGQFMTAGGYVLFIENINNEQNKLNDIYVFQPDQQK 181 Query: 181 TQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+SG + Q + L + + + D I F SY + + Sbjct: 182 KNRPSVVVAESGQLQGLPNGDQILTLENSTRYEGTANVADFRISHFDSYQAYLGYQDVDS 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + L+ + ++E R L + L+++ + Sbjct: 242 NEKLVQRADFNKLM----------ADQSNEAKAELQWRFALILAVPLMALLAVPMSSVNP 291 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + K+ P + I F + + + + L F I ++ + K Sbjct: 292 RQGRFAKVIPAVLLYLIYFLLQSSLKSSGASGKLDATLLMPLVSIAFFILAMVMNFWDTK 351 Query: 358 Y 358 + Sbjct: 352 W 352 >gi|170697653|ref|ZP_02888741.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria IOP40-10] gi|170137401|gb|EDT05641.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria IOP40-10] Length = 363 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 52/363 (14%), Positives = 123/363 (33%), Gaps = 15/363 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ I +++ + +S +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTIMLTTMMIRIVGYAASGEIDPRDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT R++E+++ +G S LIKP+ A + + + + Sbjct: 62 VMLVVTLFVSILFVLTRWYRDSEMVVWLASGVSLTRLIKPIGVFATPIILLIAFFAFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P K + A+ Q S L F + + + + + + + Sbjct: 122 PWSNQQSKMIKARFQQRDEISLLAPGQFRESASNHRVFFIEKMAPDQSKVQNVFVTSTEN 181 Query: 183 THKIY---YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + ++L DG + +P + IM+F+ Y ++ S + + Sbjct: 182 GKVNIVVSHTGHTETKDGDRFVVLEDGRRYDGTPGQPNFKIMEFQRYGVKITSTPVTNVP 241 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD-KRAL 298 + L NP +N +EF R L + ++ I + Sbjct: 242 TTNSTPTPDLLRNPTRDNL-----------AEFAWRAGLPLIAINLMVLGIPLSYQNPRR 290 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 R + + I L+ S + + I + L++ + I ++ + + Sbjct: 291 SRTINLVMAVLIYLTYSNLLNVVQAQIEQGKMSFGVGLVGLHVIVAAIVALIFWLRVRNR 350 Query: 359 TKI 361 + Sbjct: 351 PLL 353 >gi|330752461|emb|CBL87411.1| predicted permease YjgP/YjgQ [uncultured Flavobacteria bacterium] Length = 357 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 44/360 (12%), Positives = 115/360 (31%), Gaps = 6/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK F+ YIL+ +F + L + I + + ++I+ + + + + Sbjct: 1 MKIFDWYILKRYLLTFFLMLLLFIPIGITVNLAEKIDRILENKVPFDEVAAYYFDFTIYF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + + + NTE++ ++G S ++P +++I Sbjct: 61 ANLLFPLFLFLSVIWFTSKLANNTEVIAFLSSGISFFRFLRPYFIGGTVIAIVALFLGMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 PK + + K + DD+ + + + + Sbjct: 121 WAPKASKGYNEFTYKYLSNKKAVQSQYIYQQINDDEYIYVSNFDSNSMRGNNFTLEHFDG 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + +A + L++ + I + L + + + Sbjct: 181 NKLEYKIHASAIRFIEKDSNYRLSNYYLRYIGKDHDSIIFKRRIDTLLGFDLLDLTPPKY 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 A + L + + Y+ +K+ + + I +I++ ++ R Sbjct: 241 VAETLTVHELSDFIKREEARGSSNINRYKVVQYKKWSLPVSVYILTIIAVAV---SSIKR 297 Query: 301 QRKKIHPIFISLSISFGVFW---GFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + + I+ + F + + + P F+F I +I+LL K+ Sbjct: 298 RGGMGVNLAFGIVIAMVYVFFDKVFGVMAEQSDFPPVVAVWFPNFIFGILAIYLLFNAKR 357 >gi|126725341|ref|ZP_01741183.1| putative permease [Rhodobacterales bacterium HTCC2150] gi|126704545|gb|EBA03636.1| putative permease [Rhodobacterales bacterium HTCC2150] Length = 365 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 55/359 (15%), Positives = 118/359 (32%), Gaps = 12/359 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 LY R +FLM I ++I +++++ SS++ + +++ P L Sbjct: 2 ILHLYFARKFITNFLMILFVFFGIIFLIDMVEQLRRFSSNSVGMKEAAQLALLNAPGNLY 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + T + ++ R +EL+I +G S + + L + L +F N I Sbjct: 62 RILPLLVILSTLALFLNLTRTSELVIARASGRSALGALLAPLLVTFTLGVFGVSVWNPIG 121 Query: 123 PKCRSTI-----KQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD 177 + + L + + ++ I ++ N N T+ G Sbjct: 122 AATANLYETISDRHLGRASNALSIGAEGLWLRQGNVEGQTVIHANETNQNGTILGNVTFL 181 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI---SKDISIMKFKSYTLQTESAN 234 + D + IY ++ + L+ +LND + S Sbjct: 182 AFDINSQVIYRIEAKTAKLETGGWVLNDTKRWDFKDTLNPELSASTTDTIRLQSNLTQKE 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 +D L + +R + L F + LI A Sbjct: 242 IQESFGAPSDIPFWEL-PAFIASLENAGFSSTQHRVWYATELALPAFLMAMVLIG--AMF 298 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 R K + ++ + FG+F+ ++ + + +L + ++ I L + Sbjct: 299 TMRHSRFGKTGIMLLGAIVMGFGLFFLKNFAQ-VLGNSGQIPVLLAAWTPPLAGILLAL 356 >gi|325919211|ref|ZP_08181260.1| putative permease [Xanthomonas gardneri ATCC 19865] gi|325550311|gb|EGD21116.1| putative permease [Xanthomonas gardneri ATCC 19865] Length = 368 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 41/363 (11%), Positives = 100/363 (27%), Gaps = 11/363 (3%) Query: 5 ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 + Y+ R + + L++ ++ + V + + + Y +P + Sbjct: 9 DWYVGRAVLFTVLLTWAVLLGLDLVNAFASEAKNIGQGSYTFGHAFAYVAYTVPRRAYTL 68 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P + L + +EL + G SR + V+ LL+ + IS + P Sbjct: 69 FPTAAVIGALMGLGQLAATSELTALRALGVSRKRMSASVVAAMALLTAGMVISGETVGPW 128 Query: 125 CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKI--------SKYNPNNTLQGIFIV 176 ++ L A+ + + + + D ++ L + + Sbjct: 129 AQNQADTLKTSARYNSDMAMARYSGLWAREGDTFLNALSGEEKLLDGGGTALDLHDVRLY 188 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + A L S + Q A + Sbjct: 189 HLDASGRLQQLTYA-ALAENRNGAWTLRQVRRDTFQERSVQRETFPELPWQSQLSPAALA 247 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + K + + L + Y ++ R L + L +I + Sbjct: 248 AGLAKPRNLSARDL-EQSIEYRRRNGLDARDYEDQYWSRWFYPLNVLALCLAAIPFSFGS 306 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 K + I ++ F + F Y L + + + ++ Sbjct: 307 LRSGGLGKRLFLGILFALGFWLLQLFFG-RMAGALKLDYRIAYALPPMVMLGVSAWLFRR 365 Query: 357 KYT 359 + + Sbjct: 366 RSS 368 >gi|307294586|ref|ZP_07574428.1| permease YjgP/YjgQ family protein [Sphingobium chlorophenolicum L-1] gi|306879060|gb|EFN10278.1| permease YjgP/YjgQ family protein [Sphingobium chlorophenolicum L-1] Length = 367 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 47/358 (13%), Positives = 114/358 (31%), Gaps = 7/358 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTV 60 + Y+ R +V + + +L + + L P + Sbjct: 10 RQISWYMARLFLTRTFAVLAMLVAVLQTLDLLGESGDILAYAGNGDAQLWHYVALRAPQI 69 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + PF + T +L S+N+N+E++ + G S ++ P+L A+ +++ + Sbjct: 70 VARFLPFSVLLGTLIMLASLNQNSEIISMKAAGLSAHQILAPLLAAALGVALISYAFNER 129 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD---LYIKISKYNPNNTLQGIFIVD 177 I + + + A L + + D + ++ L+ + I + Sbjct: 130 IVARSTARLSAWQAVDYGPLPPETGVKASPWVRDGNNLVTAAIVAGRGTAVQLRKVEIFN 189 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + I A G D ++ +L E + + + + Sbjct: 190 RVNNMLTTIVQAPKGHYDPVAKSWVLE--EARQFDVARGTERQVGTVRFGRDIRPDQFTL 247 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + S L + +L+ L ++ ++ VAA A Sbjct: 248 AKVDPDALTFSQL-QAAIGDLRDAGRPTSELEGSLWHKLSGPLSALLMPILGSVAAFGLA 306 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 Q + ++L ++ V FS + + P ++ FL + ++ + Sbjct: 307 RSGQLFVRAVMGMALGFAYFVADNFSLAMGNLGAYPPFLAAWAPFLLFLLVGETVLFR 364 >gi|19704366|ref|NP_603928.1| hypothetical protein FN1031 [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296327426|ref|ZP_06869973.1| YjgP/YjgQ family permease [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|19714618|gb|AAL95227.1| Hypothetical membrane-spanning protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296155439|gb|EFG96209.1| YjgP/YjgQ family permease [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 359 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 53/338 (15%), Positives = 117/338 (34%), Gaps = 1/338 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YIL + +++ FI + ++ + + S+ +L++ + IP + Sbjct: 1 MKIINKYILDELKGPIILAVFVFTFIFLLDIVVTMMEHIIVKGISVFDVLRLLSFYIPPI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + T +RN+E + + +TG S ++KP+L +AI SIF+ + Sbjct: 61 LTQTIPIGMFLGIMICFTKFSRNSESVAMVSTGMSIRDILKPILAIAIGASIFIVFLQES 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P+ +K + K L+E F D+ I + + + + + I + + Sbjct: 121 IIPRSFIKLKYVGTKIAYENPVFQLKEKTFIDNLDEYSIYVDEVSSDGKAKNIIAFEKPE 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + AII+ + + K + F + + + + Sbjct: 181 DKNKFPMVLTGEEAFWKDSAIIIKESQFVSFDEKGKKNLVGTFDEKRVVLTAY-FQDLNI 239 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K D +++ + Y+ E ++L V +I + + Sbjct: 240 KIKDVEALSIIDLIKGLKKVEATEVIKYKIEIFRKLALVFSTVPLAVIGFCLSLGHHRIS 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 ++ I + + + NP+ Sbjct: 300 KKYSFVLAMIIVFAYIIFLNIGIVMATAGKLNPFIATW 337 >gi|114776266|ref|ZP_01451311.1| hypothetical protein SPV1_01062 [Mariprofundus ferrooxydans PV-1] gi|114553096|gb|EAU55494.1| hypothetical protein SPV1_01062 [Mariprofundus ferrooxydans PV-1] Length = 386 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 51/363 (14%), Positives = 140/363 (38%), Gaps = 10/363 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + + Y+LR F +F++ + + + L+ + VS + E+ ++++ + +P L Sbjct: 2 TLDRYMLRLWLGPFFGGLVFVLAVMLLARALKLLGTVSDTAEAWSLIVDLLALTMPFFLL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P F + N +T + +++E+ ++ +G S + + + LL + L + Sbjct: 62 QIVPMAFFLSLQNTITGLQQSSEMDVLRGSGLSYGRMFRVFFIVVPLLWLGLTYIAMVQL 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P+ + + AK F R D + + + + T I++ Sbjct: 122 PQGQLGFNNILAKIYAMKGAISFAPQRFTRGLDGITVYVDGEDSEGTY-HGLILEDHRGG 180 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 IY A+S D+ + ++L + R D ++ F Y + + +L + Sbjct: 181 VSVIYTAKSARFDMGGEYLLLKLKDGVRLEGEGADQRMLAFDRYQVSIALPAGNRKILHS 240 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 ND + P + + + +E+++RL ++ ++ + ++ Sbjct: 241 NDHVTM-MTVPELWHAMHNSQS-GAAVAEWNRRLLMPTTTLVLLFFALPLSL---TQKRS 295 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK----KY 358 K + +++ V+ + ++ Q + +++ + + + K+ + Sbjct: 296 GKAGSMIGGIALLVMVYNLQLLLYQQVNQGGFPGWSMWMGQALLLFTGMFLSKRAEADRL 355 Query: 359 TKI 361 K+ Sbjct: 356 PKL 358 >gi|300114327|ref|YP_003760902.1| permease YjgP/YjgQ family protein [Nitrosococcus watsonii C-113] gi|299540264|gb|ADJ28581.1| permease YjgP/YjgQ family protein [Nitrosococcus watsonii C-113] Length = 383 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 47/361 (13%), Positives = 124/361 (34%), Gaps = 20/361 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + YIL+ + + L ++ I I+ ++ ++ + +L +SGY L Sbjct: 6 IVDRYILKELSLNATAITLVLLLIFGGIRFIRFLSQATKGKVPGEAILALSGYEAIGALV 65 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L M + E++ + G SR L++ VL ++L+I + + Sbjct: 66 LLLPLASFLAVLLALGRMGADNEVIALFACGVSRRHLLRVVLTFGLVLAIGVGSISLYLG 125 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIKISKYNPNNTLQGIFIVDSRDT 181 P + +L +A LA S L F + + + Sbjct: 126 PAASAEGYRLKQQALLAAETSGLVAGNFKESQHGQRVFYAESLTEDGLGMKNVFIQVWEP 185 Query: 182 QTHKIYYAQSGSIDLD----RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 ++ A +G + D + +IL DG + I I +F+ + + + Sbjct: 186 TQKTLFRAATGHLQTDEGTGDKHLILEDGYRYDLMGEEVGIRIFRFERHGILVKKGGMQE 245 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 ++ L +E R++ + ++ ++++ A Sbjct: 246 FRIRHQTLPTLTLWEM----------GAPKDIAEIQWRISMPITTLLLVMLAVPLA---R 292 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMIK 355 ++ + + ++ + + + E P ++ + ++ + + + + Sbjct: 293 SGPRQGRYAGLLPAVLVYVIYSNMLGIARNWVEHEVIPAFLGLWWIHALMLLVVLISLWP 352 Query: 356 K 356 + Sbjct: 353 R 353 >gi|332969353|gb|EGK08378.1| YjgP/YjgQ family permease [Kingella kingae ATCC 23330] Length = 354 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 45/360 (12%), Positives = 113/360 (31%), Gaps = 6/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YI+ + + I+ + I +L I + ++ + L+ +P Sbjct: 1 MKLLSRYIITRLSLMSAYALFAILSLYSFIDLLSEIG-IVGQNYTMAVALQYIALQMPAR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L + ++E +I +G S LI +L + ++F + Sbjct: 60 AYQLMPLATLIGGLIALNQLVSSSEWAVIKTSGWSSKRLIGTILQFGAIFAVFTILLGEW 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P+ + A+ T ++ + + + + L + Sbjct: 120 IAPELSRRGDAIKTLARSQQTTLVHN-GVWIKQPNSMINIGAMLPDKTLLDVKIWQFNDQ 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 Q + YA+ + LN + + S +++ +S +++ Sbjct: 179 YQLTESVYAKQARFANGQWQ--LNQVQSSELADKQIRTSQQGQRTWQFNIQSNMLDVLMV 236 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K + L + E Y + +L + ++ L+++ Sbjct: 237 KPEQMSFINLTQ-YIGYLKDNKQQTEAYDVAWWNKLVYPIATMVMALVALAFTSNSGRHG 295 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 I L + F ++ + P ++ + L + + +I K+ + Sbjct: 296 NLGLKLFGGICLGLLFFFTGRLFGFTTQLYRVPAFVSAV-LPTLGFALWAMWLIVKQERR 354 >gi|239809484|gb|ACS26210.1| unknown [uncultured bacterium] Length = 359 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 44/356 (12%), Positives = 121/356 (33%), Gaps = 25/356 (7%) Query: 18 MSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVL 77 ++ I + ++ + + +LL I G+ +P L ++ P + Sbjct: 3 AVSAVLLVIIMSGRFIKYLAQAAQGLLDPGVLLLIMGFRLPGFLQLILPLGLFLGILLAY 62 Query: 78 TSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQ 137 + +E+ ++ TG S+ L+ L A L+++ + + P+ + + ++ + Sbjct: 63 GRLYLESEMTVLSATGMSQRRLLVYSLAPAALVAVVVGWLSLGLAPQGIAEVDRILNQQD 122 Query: 138 LALTFSYLEENLFF--RLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTH---------KI 186 F L F R + + L G+FI ++ ++ Sbjct: 123 SLTEFDTLVPGRFQTLRGGSRVTYTRELSADRSELGGVFISETNVSRQTGKESGLSVLVA 182 Query: 187 YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 + + +IL +G + +P D +++ +Y + S + + Sbjct: 183 ESGRQEVQPDGSRYLILENGYRYDGNPGQADYRAIQYDTYGVLLPKPEVSMELSEREALP 242 Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 LL +R+E R + L + ++++ A + ++ + Sbjct: 243 TRELL----------GSDNIRHRTELQWRFSLPLLVFVVTVLAVPLA---KVNPRQGRFL 289 Query: 307 PIFISLSISFGVFWGFSYIIHKIEQN-PYYIPILYLFLFCISSIFLLMIKKKYTKI 361 + ++ + + +++ L+ +I LLM+ + ++ Sbjct: 290 KLLPAILLYMTYLALLIAVRGALDKGRIPMALGLWWVHGLFLAIGLLMLYWEPIRL 345 >gi|121594279|ref|YP_986175.1| permease [Acidovorax sp. JS42] gi|120606359|gb|ABM42099.1| permease YjgP/YjgQ family protein [Acidovorax sp. JS42] Length = 369 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 47/370 (12%), Positives = 123/370 (33%), Gaps = 15/370 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRIN---LVSSSTESLNILLKISGYLI 57 MK+ +I R + L + + + ++ + ++ L+ L + Sbjct: 1 MKTIRRFIYREVVVGVAFVTLAFLALFFFFDMVDELRWVGRAGANGYQLSHALLFVALSL 60 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 P +L + P + T V+ + +++E I+ +G + +L L + I Sbjct: 61 PQLLYELLPITVLIGTIFVMARLAQSSEFTIMRTSGLGPWRALSTLLMLGCAFVMVTVIV 120 Query: 118 ENIIEPKCRSTIKQLSAKAQLALTFSYLEEN-LFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + I P + A+ ++ + D + + + +PN ++G+ + Sbjct: 121 GDYIAPASEKAASLVKARRLGQISTGATGAWLKERQGDHSIAVNVRAVDPNGAMRGVRVF 180 Query: 177 DSRDTQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK-----FKSYTLQT 230 + A+ + D R A L + + + + + Sbjct: 181 EFDARGRVAATIQAEQATFDDARDAWNLQQVQRTLFEAEADGGMRVSRLQEPTLRWPTRI 240 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 + +LK + L + + + Y EF +++ L ++ ++S+ Sbjct: 241 SPDMVAASLLKPDKMATIELFR-FVRHLEANGQSAQRYEIEFWRKVFYPLSCLVMVVLSL 299 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYY---IPILYLFLFCI 346 A + ISF + F + + +P+ P L + + Sbjct: 300 PFAYLHFRSGGIAGYVFGGVMAGISFFLLNNVFGFAGNLQNWSPWLTAAAPGLIYSVLSL 359 Query: 347 SSIFLLMIKK 356 ++ L++++ Sbjct: 360 AAFGWLVLRR 369 >gi|212710412|ref|ZP_03318540.1| hypothetical protein PROVALCAL_01473 [Providencia alcalifaciens DSM 30120] gi|212686832|gb|EEB46360.1| hypothetical protein PROVALCAL_01473 [Providencia alcalifaciens DSM 30120] Length = 358 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 45/355 (12%), Positives = 116/355 (32%), Gaps = 2/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI R I S LM+ +V ++ +I+ ++++ V + + +P + + Sbjct: 5 LDRYIGRTILNSILMTLFLLVSLSGIIKFVEQLRKVGDGDYTAMSAGVFTLLTVPKDIDI 64 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L ++ +EL+++ +G +R+ + V+ AI L I I I P Sbjct: 65 FFPMAALLGALLGLGALASRSELVVMQASGFTRLQIAMSVMKTAIPLVIVTMIMGEWIAP 124 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + A+ + + + ++ + D + + + Sbjct: 125 AGEQWARNYRAEKIVGSSLVVTDSGMWAKDAHDFIYIQRIKDASTIQDVSIYRFDDHRKL 184 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK-SYTLQTESANSSTIVLKA 242 + +A G+ D D++ +L+ + K + + + L A Sbjct: 185 ESVMFAARGTYDADKKLWVLSQVQESILGSQQKITGSQRLTYDWKTNLTPEKLGIVSLNA 244 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++ L ++ Y+ +++ L + L+++ Sbjct: 245 DSLSIRGLYQ-YITYLKESGQVASVYQLSMWQKILAPLSAAVMMLMAVSFIFGPLRTVPM 303 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I F + + P + + + L++K+K Sbjct: 304 GVRVVSGIVGGFLFYILNQGFGNWSLVYSIPPVVAAALPSVLFLGVSIFLLVKRK 358 >gi|189219653|ref|YP_001940294.1| permease [Methylacidiphilum infernorum V4] gi|189186511|gb|ACD83696.1| Predicted permease [Methylacidiphilum infernorum V4] Length = 395 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 43/353 (12%), Positives = 109/353 (30%), Gaps = 4/353 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K Y+ + L + + + + + + + + + +P V+ Sbjct: 28 KILFRYLFKGFLFPLLFTIVAFCSLVIIADLFGSLEDFIQNKATPGQIFHYYLAYLPAVI 87 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M+ P + L ++R+ EL+ + G + P L + +L+++FL + Sbjct: 88 IMIVPPASLFSSLYFLMQLHRHGELIAMQACGVPLQKIFTPFLIIGVLVTLFLAALQLGP 147 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEE-NLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 ++ Q+ + T + ++ + + + V ++ Sbjct: 148 GGNSQAKRDQILEDIKGNKTAVHALRGIIYKEEAEKRIWYFRQLDFIKNQGEDVEVVVQE 207 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKS---YTLQTESANSST 237 + + I + + + F++ + T Sbjct: 208 NSGKDLKKYFARKAAWKDNHWIFYEVNRIDYDSANNFLQSTYFETLPLVSWNTPPRQMVA 267 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + K D N S L + + LL Y+ +F+ + + L ++ LI + + + Sbjct: 268 LEKKPRDLNASELWKLINKPRSIQKTLLAPYQVQFYTLVAEPLTILVLLLIGLAEGGRLS 327 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 + L + +F F + P L F + S+F Sbjct: 328 SRHPTAGVFNALFILIAFYLIFHFFQILGQGSRIPPAVAIFSPLVAFTLFSLF 380 >gi|172061426|ref|YP_001809078.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria MC40-6] gi|171993943|gb|ACB64862.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria MC40-6] Length = 363 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 53/363 (14%), Positives = 123/363 (33%), Gaps = 15/363 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ I +++ + +S +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTIMLTTMMIRIVGYAASGEIDPRDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT R++E+++ +G S LIKP+ A L + + + Sbjct: 62 VMLVVTLFVSILFVLTRWYRDSEMVVWLASGVSLTRLIKPIGVFATPLILLIAFFAFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P K + A+ Q S L F + + + + + + + Sbjct: 122 PWSNQQSKMIKARFQQRDEISLLAPGQFRESASNHRVFFIEKMSPDQSKVQNVFVTSTEN 181 Query: 183 THKIY---YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + ++L DG + +P + IM+F+ Y ++ S + + Sbjct: 182 GKVNIVVSHTGHTETKDGDRFVVLEDGRRYDGTPGQPNFKIMEFQRYGVKITSTPVTNVP 241 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD-KRAL 298 + L NP +N +EF R L + ++ I + Sbjct: 242 TTNSTPTPDLLRNPTRDNL-----------AEFAWRAGLPLIAINLMVLGIPLSYQNPRR 290 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 R + + I L+ S + + I + L++ + I ++ + + Sbjct: 291 SRTINLVMAVLIYLTYSNLLNVVQAQIEQGKMSFGVGLVGLHVIVAAIVALIFWLRVRNR 350 Query: 359 TKI 361 + Sbjct: 351 PLL 353 >gi|301168145|emb|CBW27733.1| putative permease [Bacteriovorax marinus SJ] Length = 382 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 55/381 (14%), Positives = 119/381 (31%), Gaps = 23/381 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K + Y+ F MS F V Q+ + I +V S +++ ++ G++ + Sbjct: 2 LKLTQRYLAVNFIAPFTMSLFFFVAFLLTFQLFRIIKIVISKGVEWSLVFELMGHIAISF 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +PM P T L ++ ++E++ + + G ++ L P L A+ + ++ N Sbjct: 62 IPMAVPLSCLFATIYTLNKLSDDSEIVAMRSFGMTKSKLFLPFLISALFIGACIYSLNNK 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P ++ K + + ++E FF + + + Sbjct: 122 VIPASKTQFKNTIIRLTSRGVLTDIKEGQFFTEVAGVTLFADTVIDKGRKMYNVFIQQEG 181 Query: 181 TQTHKI----------YYAQSGSIDLDRQAIILNDGEVH-RKSPISKDISIMKFKSYTLQ 229 ++ + + L DG + R +KD+ + FK Y Sbjct: 182 KGNLLEQVVTAKEGALIKIKNEEWSIPSVRLHLTDGTIVKRFKDTNKDLEKILFKEYDFP 241 Query: 230 TESANSSTIVLKANDQNLSFLLNPNPNNP-----------NYRPELLETYRSEFHKRLTQ 278 S + + + + L R + + E R+ Sbjct: 242 LASGGAVNNFVTKDGMRTNAELRSEIKKATALAVKKKLSRKDRERSMAKTKLELWSRINT 301 Query: 279 WLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 L +F LI K + + L + +F+ K P Y+ + Sbjct: 302 PLLCFVFILIGFSLGIKHGRGKSKNSSGRALFVLLGYYSLFFLGVSFARK-GIVPAYVVV 360 Query: 339 LYLFLFCISSIFLLMIKKKYT 359 + S K + Sbjct: 361 FAPTIILASIGAYFYKKLDWA 381 >gi|326423843|ref|NP_760389.2| hypothetical protein VV1_1477 [Vibrio vulnificus CMCP6] gi|319999213|gb|AAO09916.2| Putative membrane protein [Vibrio vulnificus CMCP6] Length = 366 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 47/360 (13%), Positives = 119/360 (33%), Gaps = 23/360 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + Q + + S ++++ I +P++ Sbjct: 2 IIVRYLIRETLKSQFAIFFVLFLVFLSQQFISVLADASDGDIPASLIMSIVALNMPSMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+++++ TG LI+ L+LA++ S + + Sbjct: 62 LMLPLSLYIGILITFGRLYAESEIVVMNATGIGNKFLIQAALYLAVITSGVAAFNSLWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++QL+ + + L++ F D + + L +F+ Sbjct: 122 PWSMDRVEQLTEQVAAENSVDLLKKGQFQFTPDRSSVVFIDDIKDKQLSNVFVAQLMPRD 181 Query: 183 THKIYYA-----QSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + + RQ I + G + P + I +F+ Y + Sbjct: 182 SILPSVMFANGGEVKELSDGRQIISMKQGTRYEGVPTRVEYMITEFEQYDGLIGQRSVKQ 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L+ ++E R++ + V L++++ A Sbjct: 242 RGRDWDAIPTLELI----------GNPDPEAQAELQWRVSLF---VCIPLLTMLVIPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-----NPYYIPILYLFLFCISSIFLL 352 + ++ + + ++ I F S +E+ + PI L L + Sbjct: 289 VSPRQGRFAKMGPAILIYLAYFLSISATKSALEEGDISASIGMWPINGLLLLVAIMANFM 348 >gi|169634641|ref|YP_001708377.1| hypothetical protein ABSDF3306 [Acinetobacter baumannii SDF] gi|169153433|emb|CAP02575.1| conserved hypothetical protein; putative membrane protein [Acinetobacter baumannii] Length = 356 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 40/356 (11%), Positives = 112/356 (31%), Gaps = 4/356 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y+ + + + + + + + L + + + + P L Sbjct: 5 RIVAKYVTKTTALAMFGTTIVLSVLQILFTYLGELGEL-KPDYNAWQAFIYVLWGAPRYL 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ N+EL+++ + G S ++ V+ A+LL + F + Sbjct: 64 YEILPISALIGAVIGLGALASNSELIVMRSVGISLWRIVGWVMRSALLLIVLSFALSEWV 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + + +A + +Q + ++D Sbjct: 124 VPYTNEKAQSVKSHRSVAALGEVKGYWSREGQRFIYIDYANSQGNLRDIQ--VVDFNKDY 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + A+ G D Q + ++ + + ++ +S L + + L Sbjct: 182 HLQSLINAEQGKFIQDGQWTLQKASQMDILTDGNSILNNHDQQSLGLALQPKYVHMVTLD 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 D + S L++ Y ++ +TY+ F +++ + L++ Sbjct: 242 PEDLSPSQLISFMRYMDEY-SQVPKTYQLAFWQKVASPFSLITLVLVACSFIFGPLRQHS 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I + + + F F + +L + + L+ + + Sbjct: 301 MGFRLVIALFIGLGFYYLQDFLGYASLVYAPSPAWFVLMPIILMFGAGSYLLYRAR 356 >gi|320155252|ref|YP_004187631.1| putative permease [Vibrio vulnificus MO6-24/O] gi|319930564|gb|ADV85428.1| predicted permease [Vibrio vulnificus MO6-24/O] Length = 366 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 47/360 (13%), Positives = 119/360 (33%), Gaps = 23/360 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + Q + + S ++++ I +P++ Sbjct: 2 IIVRYLIRETLKSQFAIFFVLFLVFLSQQFISVLADASDGDIPASLIMSIVALNMPSMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+++++ TG LI+ L+LA++ S + + Sbjct: 62 LMLPLSLYIGILITFGRLYAESEIVVMNATGIGNKFLIQAALYLAVITSGVAAFNSLWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++QL+ + + L++ F D + + L +F+ Sbjct: 122 PWSMDRVEQLTEQVAAENSVDLLKKGQFQFTPDRSSVVFIDDIKDKQLSNVFVAQLMPRD 181 Query: 183 THKIYYA-----QSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + + RQ I + G + P + I +F+ Y + Sbjct: 182 SILPSVMFANGGEVKELSDGRQIISMKQGTRYEGVPTRVEYMITEFEQYDGLIGQRSVKQ 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L+ ++E R++ + V L++++ A Sbjct: 242 RGRDWDAIPTLELI----------GNPDPEAQAELQWRVSLF---VCIPLLTMLVIPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-----NPYYIPILYLFLFCISSIFLL 352 + ++ + + ++ I F S +E+ + PI L L + Sbjct: 289 VNPRQGRFAKMGPAILIYLAYFLSISATKSALEEGDISASIGMWPINGLLLLVAIMANFM 348 >gi|166713423|ref|ZP_02244630.1| hypothetical protein Xoryp_18790 [Xanthomonas oryzae pv. oryzicola BLS256] Length = 368 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 42/363 (11%), Positives = 102/363 (28%), Gaps = 11/363 (3%) Query: 5 ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 + Y+ R + + L++ ++ + V + + S + Y +P + Sbjct: 9 DWYVGRVVLSTVLLTWAVLLGLDLVNAFASEAKNIGQGSYSFGHAVAYVAYTVPRRAYTL 68 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P + L + +EL + G SR + V+ LL+ + IS I P Sbjct: 69 FPTAAVIGALMGLGQLAATSELTALRALGVSRKRMSASVVAALALLTAIMVISGETIGPW 128 Query: 125 CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKI--------SKYNPNNTLQGIFIV 176 ++ L A+ + + + D ++ L + + Sbjct: 129 AQNQADTLKTSARYNSDMAASLYAGLWAREGDTFLNALSGEEKLLDGGGTALDLHDVRLY 188 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + S + D L S + A + Sbjct: 189 HLDSSGRMQQLTYASVAEHRDGH-WTLRQVRRDTFQERSVQRETFPELPWQSLLNPAALA 247 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + K + + L + + Y ++ R L + + +I + Sbjct: 248 AGLAKPRNLSAHDL-EQSIEYRSRNGLDARDYEEQYWSRWFYPLNVLALCMAAIPFSFGS 306 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 K + I ++ F + F Y L + + + + ++ Sbjct: 307 LRSGGLGKRLFLGILFALGFWLLQLFFG-RMAGALKLDYRIAYALPPMVMLGVSVWLFRR 365 Query: 357 KYT 359 + + Sbjct: 366 RSS 368 >gi|145631588|ref|ZP_01787354.1| predicted permease [Haemophilus influenzae R3021] gi|144982788|gb|EDJ90314.1| predicted permease [Haemophilus influenzae R3021] Length = 367 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 46/357 (12%), Positives = 129/357 (36%), Gaps = 19/357 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + +S + L ++ I + Q ++ + ++ +++ + G +PT+ Sbjct: 2 ILIRYLIKEVFKSQIAILLILLLIFFSQQFVRVLGAAANGNVPADLVFSLLGLGMPTMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P C + + +E+ ++ G + L+K L +++L + + + Sbjct: 62 LMLPLCLFIAILLTFGRLYAESEITVMRACGVGQRILVKVALIMSLLTAGIAAYNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + A+ T L F +++ + +N ++ +++ + Sbjct: 122 PWAIQKQVNMVEDAKANPTVGVLSSGQFISTNNNNVVLFIDKIKDNQIRNVYLFQMTPQK 181 Query: 183 --THKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G + Q + L + + + + D I F Y + Sbjct: 182 QTKPSVVTAEKGELIALPNGDQVLNLKNTKRVEGTSVLPDFRITHFDEYRAYLGYQAAEN 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +A + LS L++ + ++ ++E H R+T L + LI++ Sbjct: 242 TNDEAAELTLSQLIDLDSSSA----------KAELHWRITLILAVPLMALIAVPL---SR 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-PYYIPILYLFLFCISSIFLLM 353 + ++ + I +L + F S ++ L + +++ Sbjct: 289 VNPRQGRFAKILPALLLYLIYFLLQSSFKSAGAAGKLEAELLMPLVNIGFFLLAVVL 345 >gi|270340118|ref|ZP_06007105.2| conserved hypothetical protein [Prevotella bergensis DSM 17361] gi|270332630|gb|EFA43416.1| conserved hypothetical protein [Prevotella bergensis DSM 17361] Length = 395 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 50/360 (13%), Positives = 117/360 (32%), Gaps = 8/360 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPTV 60 K + YI++ +++ S L I+ I+ V + + + S L I+ +P Sbjct: 36 KRIDWYIIKKFIGTYIFSILLIISISIVFDVNENLAKFSQYHAPLEAIVFDYYANFVPYF 95 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + + + + N+E++ + TG S L++P + +LL+ + Sbjct: 96 ANLFSALFVFISVIFFTSKLAGNSEIIAMLATGMSFKRLLRPYMITCVLLAGLSYYLSAY 155 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + E + N G + + Sbjct: 156 VIPHGTVIRQNFETMYKNKHKNTSAENVQLQVGRGVIAYIQHYDNTMKKGYGFCLDKFEN 215 Query: 181 TQTHKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A I + L + ++ R + + I+ K + E + Sbjct: 216 KKLVSHLTAMEVQYDTISDSKYHWKLTNWKIRRLKGLREHITSGAEKDSVIMMEPTDLVY 275 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L + + + Y+ E+HKR+ I +I + Sbjct: 276 SKGQQETFTSPELKDYISKQIDRGSGNVVQYQVEYHKRIASSFASFILTIIGASL---SS 332 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 R+ + I L++SF + + N Y+ P+L ++ I + + + Sbjct: 333 RKRKGGMGMYLGIGLALSFT-YIMMQTVSATFAINAYFPPMLAAWIPNIVFAVIAFVCYR 391 >gi|326796830|ref|YP_004314650.1| permease YjgP/YjgQ family protein [Marinomonas mediterranea MMB-1] gi|326547594|gb|ADZ92814.1| permease YjgP/YjgQ family protein [Marinomonas mediterranea MMB-1] Length = 353 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 49/356 (13%), Positives = 107/356 (30%), Gaps = 4/356 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ YI + SF ++ + + + + ++ V + + + N LL++ Y P Sbjct: 1 MSRFDRYIGSSVLWSFAAVIFVLLGLDFALTFIDQVKKV-NDSYTTNALLQVLAYRAPIK 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 P + T L ++ +EL +I TG + +L+S+ Sbjct: 60 FAEYIPVASLIGTLIGLGALASTSELTVIRATGVPIWRIGFAACKPILLISLIGVGISEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P L + + + + D ++ I+ + L I I Sbjct: 120 VSPYATQQ-ADLIERLRGQSEGRFALTGGVWIKSDGNFVYINAADREGVLYDIQIFTPNG 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 KI A+ L L + + +T + ++ Sbjct: 179 QALEKIQKAKFAR-HLSDNQWRLEQVTETHFLGDRIETGYKETVPWTASLKPSHLFLASQ 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + +LS L + + + Y+ EF + ++++ + Sbjct: 238 EPEALSLSEL-HQYQSYLTGQELNAGLYQLEFWTKSLMPFACFALVIVALSSVFGPLRSS 296 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + I F + I + C + LLM +K Sbjct: 297 TMGGRIFSGVLIGIMFQNGLNLFGKMSLALSFSPLIGVAIPIALCFAIGLLLMSRK 352 >gi|160898977|ref|YP_001564559.1| permease YjgP/YjgQ family protein [Delftia acidovorans SPH-1] gi|160364561|gb|ABX36174.1| permease YjgP/YjgQ family protein [Delftia acidovorans SPH-1] Length = 375 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 48/342 (14%), Positives = 121/342 (35%), Gaps = 18/342 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ I + + RSF + + ++ + + +++ + S + +L + GY + LP Sbjct: 2 LFDSSIRKELARSFGATVVVLITVVMTMMLIRTLGQAYKGNVSPSDVLLVMGYTVLGQLP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + + L+ M R++E++I G +L++P+L A + + + I Sbjct: 62 TILGLGLFVAVVGSLSRMYRDSEMVIWFAAGQGLASLLRPLLRFAWPVLAVIAVLGLGIL 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P I+Q+ + + + F + + + + + + Sbjct: 122 PWANQQIEQIKTQFEQRSDIDRIAPGEFQESAGGSRVFFIDKDVPSATAANNVFIVANER 181 Query: 183 THKIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + G + + +L DG+ + I +FK Y Q S ++ Sbjct: 182 GRESVTSARGARLEVIKGERMAVLTDGQRMETQTSDGSVKISEFKEYGTQLGSGSNLAAA 241 Query: 240 LKANDQNL--SFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ LL P YR+E R+ L + F ++ + A + Sbjct: 242 EEMAARSTYTHELL----------PRTEPIYRAELGWRIGLPLAALNFVILGLAVA---S 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL 339 + + + ++L + + + + +P + Sbjct: 289 VNPRAGGSGSLMLALFAFIVYYNLMTLGENWVASGKLSMPAM 330 >gi|91774577|ref|YP_544333.1| permease YjgP/YjgQ [Methylobacillus flagellatus KT] gi|91708564|gb|ABE48492.1| permease YjgP/YjgQ [Methylobacillus flagellatus KT] Length = 361 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 42/365 (11%), Positives = 127/365 (34%), Gaps = 20/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ +L+ + + + L + I ++ I + + + + + + + G+ + LP Sbjct: 2 LFKRSLLQELVTTAIGGFLVLFGIVIAQRVAYYIGVAAKGSLASDAINTLLGFSMLKFLP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M+ + L+ +R++E+++ + G + I+PVL + + + + + + Sbjct: 62 MMLSLTLFLAVLLTLSRWHRDSEMVVWFSAGQGLSSWIRPVLTFGLPVIVVIALLSLFVT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + + + + + +F + + I Sbjct: 122 PWATGKGAEFRDQLKSRDELASISPGVFKESRHADRVFFVESFDELGNIVKNIFVQSMQH 181 Query: 183 THKIYYA----QSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + +++ +G + +P + + SI +F+ Y ++ E A Sbjct: 182 QKLGIIVAARGHRETAENGDDFLVMQNGRRYEGTPNTAEYSITEFERYAIRIEPAEVQQQ 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 +N L N + + +E RL + + L++I + + Sbjct: 242 PPNTQSKNSLELFNEHSPDS----------IAELQWRLAIPISAFVLILLAIPLSF---V 288 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMIKK 356 + + + ++L I S + + + P + + + F + + M + Sbjct: 289 DPRSGRSANLMMALLIYIVYNNLLSIMQAWLSQGKVPAMVGLWPVHAFFLL-LTFWMFYR 347 Query: 357 KYTKI 361 + ++ Sbjct: 348 RLFQL 352 >gi|222110916|ref|YP_002553180.1| permease yjgp/yjgq family protein [Acidovorax ebreus TPSY] gi|221730360|gb|ACM33180.1| permease YjgP/YjgQ family protein [Acidovorax ebreus TPSY] Length = 369 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 47/371 (12%), Positives = 122/371 (32%), Gaps = 17/371 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRIN---LVSSSTESLNILLKISGYLI 57 MK+ +I R + L + + + ++ + ++ L+ L + Sbjct: 1 MKTIRRFIYREVVVGVAFVTLAFLALFFFFDMVDELRWVGRAGANGYQLSHALLFVALSL 60 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 P L + P + T V+ + +++E I+ +G + +L L + I Sbjct: 61 PQHLYELLPITVLIGTIFVMARLAQSSEFTIMRTSGLGPWRALSTLLMLGCAFVMVTVIV 120 Query: 118 ENIIEPKCRSTIKQLSAKAQLALTFSYLEEN-LFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + I P + A+ ++ + D + + + +PN ++G+ + Sbjct: 121 GDYIAPASEKAASLVKARRLGQISTGATGAWLKERQGDHSIAVNVRAVDPNGAMRGVRVF 180 Query: 177 DSRDTQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK-----FKSYTLQT 230 + A+ + D R A L E + + + + Sbjct: 181 EFDARGRVAATIQAEQATFDDARDAWNLQQVERTLFEAEADGGMRVSRLQEPTLRWPTRI 240 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 + +LK + L + + + Y EF +++ L ++ ++S+ Sbjct: 241 SPDMVAASLLKPDKMATIELFR-FVRHLEANGQSAQRYEIEFWRKVFYPLSCLVMVVLSL 299 Query: 291 VAADKRALVRQ--RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY---IPILYLFLFC 345 A + +S F + F + + +P+ P L + Sbjct: 300 PFAYLHFRSGGIAGYVFGGVMAGISF-FLLNNVFGFAGNLQNWSPWLTAAAPGLIYSVLS 358 Query: 346 ISSIFLLMIKK 356 +++ L++++ Sbjct: 359 LAAFGWLVLRR 369 >gi|34763639|ref|ZP_00144568.1| Hypothetical Membrane Spanning Protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|294785395|ref|ZP_06750683.1| permease, YjgP/YjgQ family [Fusobacterium sp. 3_1_27] gi|27886692|gb|EAA23836.1| Hypothetical Membrane Spanning Protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|294487109|gb|EFG34471.1| permease, YjgP/YjgQ family [Fusobacterium sp. 3_1_27] Length = 359 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 54/340 (15%), Positives = 119/340 (35%), Gaps = 5/340 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YIL + +++ FI + ++ + + S+ +L++ + IP + Sbjct: 1 MKIINKYILDELKGPIILAVFVFTFIFLLDIVVTMMEHIIVKGISVFDVLRLLSFYIPPI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + T +RN+E + + +TG S ++KP+L +AI SIF+ + Sbjct: 61 LTQTIPIGMFLGIMICFTKFSRNSESVAMVSTGMSIRDILKPILAIAIGASIFIIFLQES 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P+ +K + AK L+E F D+ I + K + + + I + + Sbjct: 121 IIPRSFIKLKYVGAKIAYENPVFQLKEKTFIDNLDEYSIYVDKVSSDGKAKNIIAFEKPE 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSSTI 238 + AIIL + + K + F + + + + Sbjct: 181 DKNKFPMVLTGEEAFWKDSAIILKESQFVSFDETGKKNLVGTFDEKKVVLTAYFQDLNIK 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + +++ L+ + Y+ E ++L + +I + Sbjct: 241 IKDVEALSITDLIKGIKKVEATE---VIKYKIEIFRKLALVFSTIPLAVIGFCLSLGHHR 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 + ++ I + + + NP+ Sbjct: 298 ISKKYSFILAMIIVFAYIIFLNIGIVMATAGKLNPFIATW 337 >gi|253997571|ref|YP_003049635.1| permease [Methylotenera mobilis JLW8] gi|253984250|gb|ACT49108.1| permease YjgP/YjgQ family protein [Methylotenera mobilis JLW8] Length = 374 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 41/353 (11%), Positives = 114/353 (32%), Gaps = 15/353 (4%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 +++ + + + L ++ I + + L + + + I G+ + LPMV Sbjct: 7 LIKELISTAAGAFLILIGIVVAQRAGTLVRLAAKGILPNDAITTILGFNMVKFLPMVLSL 66 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 + L+ R++E++I + G S ++PVL + +F+ + P S Sbjct: 67 SLFLAVLMTLSRWYRDSEMVIWFSGGLSINNWVRPVLTFIFPVILFILALSLFVMPWATS 126 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 + + + + + +F + + + I Sbjct: 127 KGELYRTQLEARDDLATISPGVFKESANGDRVFFMESFDELGNVVKNIFVQTMQHQKLGV 186 Query: 188 YAQ----SGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 + +++ +G+ + S + S F+ Y ++ E+ + Sbjct: 187 IVAAQGSRYTEKNGDNFVLMENGKRYEGRRGSAEFSTTTFEKYAIRIEAKEAKEEPPSTQ 246 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 ++ L++ T ++E RL + +I L++I + + Sbjct: 247 SKSTKELVS----------SANSTNKAELQWRLAIPISALILSLLAIPLSALDPRAGRSA 296 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + I + F + + + + + + F + L ++ Sbjct: 297 NFILALVIYIIYNNLLSIFQAWTAQGKLS-ALVGLWPVHAFFLLLTIYLFRRR 348 >gi|323966510|gb|EGB61943.1| permease YjgP/YjgQ family protein [Escherichia coli M863] gi|327251763|gb|EGE63449.1| hypothetical protein ECSTEC7V_3615 [Escherichia coli STEC_7v] Length = 359 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 49/354 (13%), Positives = 122/354 (34%), Gaps = 3/354 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGTIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + IL+ + + + ++ S N + + Sbjct: 181 DLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLETSDNLAWQSAFTSMNLEELSM 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + YR ++L Q + + L+++ Sbjct: 241 PGNTFSVRQL-NHYIHYLQETGQPSSEYRFALWEKLGQPILTLAMILLAVPFTFSAPRSP 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + + + + + + +++ P+ L L + L + Sbjct: 300 --GMGSRLAVGVIVGLLTWSSYQIMVNLGLLFALSAPVTALGLPIAFMLVALSL 351 >gi|319941841|ref|ZP_08016163.1| hypothetical protein HMPREF9464_01382 [Sutterella wadsworthensis 3_1_45B] gi|319804774|gb|EFW01641.1| hypothetical protein HMPREF9464_01382 [Sutterella wadsworthensis 3_1_45B] Length = 377 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 37/380 (9%), Positives = 124/380 (32%), Gaps = 26/380 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + I S + + ++ + ++ +++ + + ++ + +P+ Sbjct: 1 MSVISRQFAKDILLSTIFVLIVLIALFAFFDLIGQLDDLGAD-YTIGRAFLTTSLTLPSR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 V P + + ++ +E ++ +G S L + +L ++ + + I Sbjct: 60 AYEVMPLAVLLASVYTMSKWASTSEFTVLRASGCSPWRLARSLLIPGVICVLATYGLGEI 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYL------------EENLFFRLDDDLYIKISKYNPNN 168 + P + +++ + +L+ E+ ++ + Sbjct: 120 VAPAAQRFAQEVRSGTNASLSIRGFASGAWVRDVINSPEDGRVERYINVRNLSASDRQLT 179 Query: 169 TLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQ------AIILNDGEVHRKSPISKDISIMK 222 +F + D + ++ A+SG I + +P ++ Sbjct: 180 GAWRMFEFNRDDGRLLRLVRAESGRWTGTGWELTNAVIIHYPAVTATKDAPQQGSVTTEH 239 Query: 223 FKSYTL-QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLF 281 + L T + + +++ D+ LN + + + E Y S F + Sbjct: 240 VDALKLTSTVNPDILSVMTTKPDRMSMDELNRFIEHLDQVHQDTEHYVSVFWSKAFYPFI 299 Query: 282 PVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL 341 ++ +++ A A R IF + + + + ++ + ++ Sbjct: 300 CLVMLAVAMPFAYMNA--RSGGMAVKIFCGVLVGIAFYALNNIFLYLSVLSSMPPALMAA 357 Query: 342 FLFCI----SSIFLLMIKKK 357 + +++ L ++++ Sbjct: 358 LPSILMCFAAALSLWWLERR 377 >gi|134296646|ref|YP_001120381.1| permease YjgP/YjgQ family protein [Burkholderia vietnamiensis G4] gi|134139803|gb|ABO55546.1| permease YjgP/YjgQ family protein [Burkholderia vietnamiensis G4] Length = 363 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 54/361 (14%), Positives = 121/361 (33%), Gaps = 15/361 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ I +++ + +S +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTIMLTTMMIRIVGYAASGEIDPRDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT R++E+++ +G S LIKP+ A + + + + Sbjct: 62 VMLVVTLFVSILFVLTRWYRDSEMVVWLASGVSLTRLIKPIGVFATPIILLIAFFAFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P K + A+ Q S L F + + + + + + + Sbjct: 122 PWSNQQSKMIKARFQQRDEISLLAPGQFRESASNHRVFFIEKMSPDQSKVQNVFVTSTEN 181 Query: 183 THKIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + ++L DG + +P + IM+F+ Y ++ S + + Sbjct: 182 GKVNVVVSHAGHTETRDGDRFVVLEDGRRYDGTPGQPNFKIMEFQRYGVKITSTPVTNVP 241 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD-KRAL 298 + L NP NN +EF R L + ++ I + Sbjct: 242 TTNSTPTPELLSNPTRNNL-----------AEFAWRAGLPLIAINLMVLGIPLSYQNPRR 290 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 R + + I L+ S + + I + L+L + I ++ + + Sbjct: 291 SRTINLVMAVLIYLTYSNLLNVVQAQIEQGKMSFGVGLVGLHLAVAAIVAVIFWLRVRNR 350 Query: 359 T 359 Sbjct: 351 P 351 >gi|284037837|ref|YP_003387767.1| permease YjgP/YjgQ family protein [Spirosoma linguale DSM 74] gi|283817130|gb|ADB38968.1| permease YjgP/YjgQ family protein [Spirosoma linguale DSM 74] Length = 358 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 57/358 (15%), Positives = 132/358 (36%), Gaps = 7/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNIL-LKISGYLIPT 59 MK + YIL+ ++++ + IV + +I ++++ + N + IP Sbjct: 1 MKLLDAYILKRFLQTYIFVVMVIVLVVVMIDYTEKVDNFHKTHAPGNEILFNYYLNFIPY 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++P + T + + + TE++ I ++G S + L+ P + A +L++ + N Sbjct: 61 WANYISPLMVFIATVFLTSRLAARTEIIAILSSGVSFVRLLLPYVLGATVLAVATYFMVN 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + PK T K + S N +NT + Sbjct: 121 YVIPKANKTRIAFEIKYINDAYNFSGRNVHLKIAPNTYAYLESYNNQSNTGYKFTMERVE 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 Q + A D ++ + D ++ + + ++ TL + + S+ Sbjct: 181 GNQLKQKLSADHIEWDAKKKKWTVFDYKIRTINGPQETLTPGAKIDTTLNLKPDDFSSDF 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L + + + +ETY E + R T+ +I +I ++ A Sbjct: 241 NLYETLTRPELNDHIELLQSRGADGVETYLLEKYSRDTRPFAIIILTVIGVI---MSARK 297 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF--CISSIFLLMIK 355 +R + + ++F + F + I ++ PI+ ++L ++I +L+ Sbjct: 298 SRRGVGWQVALGFFLAFT-YLLFFMLAKGIAESGNLNPIVAVWLPNAIFAAIGVLLYN 354 >gi|330720484|gb|EGG98783.1| putative permease [gamma proteobacterium IMCC2047] Length = 343 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 44/339 (12%), Positives = 119/339 (35%), Gaps = 22/339 (6%) Query: 26 IAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTE 85 + ++++ I+ V+S + + L + + +P +L MV P + V M E Sbjct: 1 MVLTSRLVRYISEVASGDIAADFLFYLIVFRLPDILLMVLPISLLLAILLVFGRMYIENE 60 Query: 86 LLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYL 145 + + +G S L + L+S+ + + P + +L + F + Sbjct: 61 MAVFSASGVSLKKLAVYAMASVSLVSLTVAALSFSLAPWGLKKVDELFVENANRTVFETV 120 Query: 146 EENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDR------- 198 F + +D ++ ++ + +R+ K + Sbjct: 121 RAGRFSPMGEDNMSLYAERLSDDQRVMSDVFIAREANGKKSNFQIMAEQGYLEVKPNSLA 180 Query: 199 QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNP 258 + +IL +G + P S+D + +F+++ ++ S LL + + Sbjct: 181 KYLILKNGYRYEGDPGSRDYKVTQFETFGIKLSSPPEQVKENSTRGMATGELLKLDSSTA 240 Query: 259 NYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGV 318 +E R++ L I L+ + + ++ + + + ++ F Sbjct: 241 ----------IAELQWRISLPLLVPIIALLGVPL---SRVNPRQGRFYFLIPAMLFYFAY 287 Query: 319 FWGFSYIIHKIEQN--PYYIPILYLFLFCISSIFLLMIK 355 S + +E+N ++ + ++ + + L+ + Sbjct: 288 LVLLSGMKTAVEENTISPWLGLWWVHVMFLCLALLVFLN 326 >gi|325917725|ref|ZP_08179913.1| putative permease [Xanthomonas vesicatoria ATCC 35937] gi|325536054|gb|EGD07862.1| putative permease [Xanthomonas vesicatoria ATCC 35937] Length = 368 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 41/363 (11%), Positives = 105/363 (28%), Gaps = 11/363 (3%) Query: 5 ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 + Y+ R + + L++ ++ + V + + S + Y +P + Sbjct: 9 DWYVGRVVLFTVLLTWAVLLGLDLVNAFASEAKNIGQGSYSFGHAVAFVAYTVPRRAYTL 68 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P + L + +EL + G SR + V+ LL+ + IS + P Sbjct: 69 FPTAAVIGALMGLGQLAATSELTALRALGVSRKRMSASVVAAMALLTASMVISGETVGPW 128 Query: 125 CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKI--------SKYNPNNTLQGIFIV 176 ++ L A+ + + + + + ++ + +L + + Sbjct: 129 AQNQADTLKTSARYNSDMAMARYSGLWAREGNTFLNALGGEEKLLANGGTALSLHDVRLY 188 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + S + D L S + Q A + Sbjct: 189 NLDTNGRLQQLTYASVAEHRDG-RWTLRQVRRDTFQDRSVQRETFPELPWQSQLSPAALA 247 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + K + + L + Y ++ R L + + +I + Sbjct: 248 SGLAKPRNLSAHEL-QQSIEYRRRNGLDARDYEDQYWSRWFYPLNVLALCMAAIPFSFGS 306 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 K + I ++ F + F Y L + + + ++ Sbjct: 307 LRSGGLGKRLFLGILFALGFWLLQLFFG-RMAGALKLDYRIAYALPPMVMLGVSAWLFRR 365 Query: 357 KYT 359 + + Sbjct: 366 RSS 368 >gi|296327425|ref|ZP_06869972.1| YjgP/YjgQ family permease [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296155438|gb|EFG96208.1| YjgP/YjgQ family permease [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 363 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 52/362 (14%), Positives = 117/362 (32%), Gaps = 11/362 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K ++YI + + FLM+ + + + + Q + I ++ + + L+P + Sbjct: 3 KKMDIYISKYFIKFFLMNIIGFMGVFLLAQTFKIIKYINQGKLAGGEIFDYILNLLPKMF 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + ++ M N E++ + +G + +++ L +A ++S+F+F N I Sbjct: 63 VETAPLSVLLAGLITISIMASNLEIVSLKTSGIRFLRIVRAPLIIAFVISLFVFFVNNSI 122 Query: 122 EPKCRSTIKQLSA-----KAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 K + I +L T L KI++ + Sbjct: 123 YTKSLAKINFYRRGEIDETLKLPTTKENAFFINNTEGYLYLMGKINRETGLAENIEVVKF 182 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 ++ ++ +I A+S D + I ++ ++ + S Sbjct: 183 NTEISKPKEIITAKSAKFDTEENKWIFSNVNIYNVETKETTAKTEYKSNLYKDDPSNFIR 242 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L N E Y +E KR + I I + Sbjct: 243 ASAEDPRMLTIKELKKTIKEQKNI-GEDTRIYLAELAKRYSFPFASFIVAFIGLSV--SS 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMI 354 VR + + I + +G + S + N P + ++ I + + Sbjct: 300 KYVRGGRTTMNLVICVVAGYGYYLV-SGAFEAMSLNGILNPFIASWVPNILYLIIGIYFM 358 Query: 355 KK 356 + Sbjct: 359 NR 360 >gi|188993098|ref|YP_001905108.1| Predicted YjgP/YjgQ family permease [Xanthomonas campestris pv. campestris str. B100] gi|167734858|emb|CAP53069.1| Predicted YjgP/YjgQ family permease [Xanthomonas campestris pv. campestris] Length = 368 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 45/371 (12%), Positives = 104/371 (28%), Gaps = 15/371 (4%) Query: 1 MKSF----ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYL 56 MK + Y+ R + + L++ ++ + V + + S + Y Sbjct: 1 MKLMPRVHDWYVGRAVLFTVLLTWAVLLGLDVVNAFASEAKSIGQGSYSFGHAIAFVAYT 60 Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 +P + P + L + +EL + G SR + V+ LL+ + I Sbjct: 61 VPRRAYTLFPTAAVIGALMGLGQLAATSELTALRALGVSRKRMSASVVVAMALLTATMVI 120 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKI--------SKYNPNN 168 S + P +S L A+ + + + + D ++ Sbjct: 121 SGETVGPWAQSQADTLKTSARYQSDMTSARYSGLWAREGDTFLNALSGEEQLLDNGGTAL 180 Query: 169 TLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 TL + + + + + D L S + Sbjct: 181 TLHDVRLYHLDAKGQMQQLTYAAVAEHRDG-RWTLRQVRRDTFQERSVQRETFPELPWQS 239 Query: 229 QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 Q + + K + ++ L + Y ++ R L + L Sbjct: 240 QLNPKALAAGLAKPRNLSVHDL-GQSIEYRRRNGLDASDYEDQYWSRWFYPLNVLALCLA 298 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 +I + K + I ++ F + F Y L + Sbjct: 299 AIPFSFGSLRSGGLGKRLFLGILFALGFWLLQLFFG-RMAGALKLDYRIAYALPPMVMLG 357 Query: 349 IFLLMIKKKYT 359 + + +++ + Sbjct: 358 VSAWLFRRRSS 368 >gi|308272620|emb|CBX29224.1| hypothetical protein N47_J02050 [uncultured Desulfobacterium sp.] Length = 356 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 54/354 (15%), Positives = 122/354 (34%), Gaps = 4/354 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+ + I + F + I+ I V+ + S + +P Sbjct: 3 MSIIDRYLTKEILKYFCIIIAAIIGIYIVVDFFDETEIFFESGLAFPTAFFCFISKMP-- 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + M++N E++ I + G S L++P+L + + + Sbjct: 61 IAQFIPLSVLLSILVTFGLMSKNNEIVAIKSGGISIYHLLRPILLIGSVFFCVVIFLSEA 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +S +++ +A L+E + +L I Y+ + + D Sbjct: 121 VVPITKSKAEKILTQANRKKFAMALKEKDIWIKGHNLITHIEYYDSSKKTIHGIKLYFFD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + ++ IL D + + +IS K L + + + Sbjct: 181 DKFRVVRRIDCEKGVFNQGNWILYDIIEQKLDKNNSEISFHKQLIEHLVFSPDDIGVVAV 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + + L + + TYR++F+ +L+ +I + A + Sbjct: 241 TSESMSAFELYDYIKKIESE-GYDATTYRTDFYAKLSFPFICIIMCFVGTGIAFRLGAKE 299 Query: 301 QRKKIHPIFISLSISFGVFWGF-SYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 I + S+ VF+GF + NP++ ++ +F IF ++ Sbjct: 300 SLPVNIVYGIGAAFSYWVFFGFCISLGEGGILNPFFAALIPNLVFLGFGIFTVL 353 >gi|88810918|ref|ZP_01126174.1| permease YjgP/YjgQ [Nitrococcus mobilis Nb-231] gi|88791457|gb|EAR22568.1| permease YjgP/YjgQ [Nitrococcus mobilis Nb-231] Length = 358 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 43/370 (11%), Positives = 111/370 (30%), Gaps = 23/370 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E Y++ + R + + I + + + S T + + + Sbjct: 1 MLLIERYLIAEVRRPLVAVVGVLSLIFASYSVARYLADALSETLGMQAVALMVALRTLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P L + + E+ ++ G S + +L LA+ +++ + Sbjct: 61 LEVLIPVALYASVVIGLGRLYNDQEMTVLGAVGISSARVYWAILLLALPVALAVGALSLF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P Q A A + + L F+ + +++ + ++ + Sbjct: 121 GRPWAYQQAYQAEAHAHVEIPLDRLRAGHFYVESQTGRMILAQEVDDQRGLLHGVLIYQR 180 Query: 181 TQTHKIYYAQSGSI-----DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + D +IL+DG + I++F +L+ + Sbjct: 181 AGEATYLTKARQARQLPTEQADEARLILHDGVTYLLDQAGSHDRILRFGELSLRLQQPQP 240 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + + + NP +E RL++ L V+ L + Sbjct: 241 VVGYKRKAAPTAALARSGNPAEL-----------AELQWRLSRPLTTVLLALFGVP--LS 287 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 R R+ + + +L + +P ++ + + + +I Sbjct: 288 RTAPRRGRFSKILLAALVYALIYSASGLAKTWVEHGVVGAVPGIWWINAVMFVVLVALIS 347 Query: 356 K-----KYTK 360 ++ + Sbjct: 348 HDLQWWRWPR 357 >gi|293406596|ref|ZP_06650522.1| predicted protein [Escherichia coli FVEC1412] gi|298382335|ref|ZP_06991932.1| predicted protein [Escherichia coli FVEC1302] gi|291426602|gb|EFE99634.1| predicted protein [Escherichia coli FVEC1412] gi|298277475|gb|EFI18991.1| predicted protein [Escherichia coli FVEC1302] Length = 342 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 45/315 (14%), Positives = 111/315 (35%), Gaps = 1/315 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 28 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 87 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 88 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 147 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 148 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 207 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + IL+ + + + + ++ S N + + Sbjct: 208 DLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLETLDNLAWQSAFTSMNLEELSM 267 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + YR ++L Q + + L+++ Sbjct: 268 PGNTFSVRQL-NHYIHYLQETGQPSSEYRLALWEKLGQPILTLAMILLAVPFTFSAPRSP 326 Query: 301 QRKKIHPIFISLSIS 315 + + + + Sbjct: 327 GMGSRLAVGVIVGLL 341 >gi|315608793|ref|ZP_07883769.1| conserved hypothetical protein [Prevotella buccae ATCC 33574] gi|315249487|gb|EFU29500.1| conserved hypothetical protein [Prevotella buccae ATCC 33574] Length = 416 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 45/363 (12%), Positives = 109/363 (30%), Gaps = 7/363 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPTV 60 K + YI++ ++ S I+ IA V + ++ + I+ IP Sbjct: 57 KILDWYIIKKFIGTYFFSIALIISIAIVFDFNENLSKFTQYHAPWRAIIFDYYANFIPYY 116 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +P + + + N+E++ + G S L++P + +L++ + Sbjct: 117 SNLFSPLFVFIAVIFFTSKLAGNSEIIAMLAAGVSFKRLMRPYMISCVLIAALTYYLGAY 176 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + A + + + + N G + D Sbjct: 177 EIPHGTVIRQDFEALYRNNTKNTAADNVQLQVDKGVIAYIQHYDNNTKKGYGFKLNKFED 236 Query: 181 TQTHKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A I + + + + + + + I+ K + E + Sbjct: 237 KKLVSDLTAMEVQYDTISDTKFHWRMRNWKQRKLQGLKEHITSGAEKDTVILMEPTDLVY 296 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L + + Y+ E+HKR+ I +I + + Sbjct: 297 SKGQQETFTSPELREYISKQIDRGSSNVVQYQVEYHKRIATSFASFILTVIGLSL---SS 353 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 R+ + + L++SFG + + + +I + +K Sbjct: 354 RKRKGGMGLYLGLGLALSFGYIMLQTVSATFAINAGAPPMLAAWTPNMVFAIVAYFLYRK 413 Query: 358 YTK 360 K Sbjct: 414 APK 416 >gi|289663726|ref|ZP_06485307.1| YjgP/YjgQ family permease [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289668603|ref|ZP_06489678.1| YjgP/YjgQ family permease [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 368 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 40/364 (10%), Positives = 104/364 (28%), Gaps = 13/364 (3%) Query: 5 ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 + Y+ R + + L++ ++ + V + + + + Y +P + Sbjct: 9 DWYVGRVVLSTVLLTWAVLLGLDLVNAFASEAKNIGQGSYTFGHAVAYVAYTVPRRAYTL 68 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P + L + +EL + G SR + V+ LL+ + IS I P Sbjct: 69 FPTAAVIGALMGLGQLAATSELTALRALGVSRKRMSASVVAAMALLTASMVISGETIGPW 128 Query: 125 CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKI--------SKYNPNNTLQGIFIV 176 ++ L A A+ + + + + + ++ L + + Sbjct: 129 AQNQADTLKASARYNSDMASSRYSGLWAREGNTFLNALSGEEKLLDGGGTALDLHDVRLY 188 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + S + D L S + Q A + Sbjct: 189 HLDPSGRMQQLTYASVAEHRDG-RWTLRQVRRDTFQERSVQRETFPELPWQSQLNPAALA 247 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + K + + L + Y ++ R + + + +I + Sbjct: 248 AGLAKPRNLSAHDL-EQSIEYRRRNGLDARDYEDQYWSRWFYPVNVLALCMAAIPFSFGS 306 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-NPYYIPILYLFLFCISSIFLLMIK 355 R +F+ + + G + + Y L + + + + Sbjct: 307 L--RSGGLGKRLFLGILFALGFWLLQLFFGRMAGALKLDYRIAYALPPMVMLGVSAWLFR 364 Query: 356 KKYT 359 ++ + Sbjct: 365 RRSS 368 >gi|91203264|emb|CAJ72903.1| hypothetical protein kustd2158 [Candidatus Kuenenia stuttgartiensis] Length = 357 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 50/354 (14%), Positives = 116/354 (32%), Gaps = 7/354 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTE-SLNILLKISGYLIPTV 60 + Y+L+ +F + L I +I +LQ+++ S + + YL P + Sbjct: 3 SRLDRYLLKAFFPTFFLCLLIISGTYVIIDLLQKLDDFLEMGINSFGVASRYYAYLFPVI 62 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + VL ++RN E+L + G S ++ P+ + + + F + Sbjct: 63 ITQFFPAITLVAVGIVLVRLSRNKEILAMQVAGISLYRILLPIFVVTVFMGFASFGDQEW 122 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P+ ++ + + L + K S +FI+ + Sbjct: 123 IVPRFAEKLEAMQQNTFDSDVQRNLLVHDDENNALIRIWKYSNKTQKMD--SVFILSRDE 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + + +L+ H + ++ + S + Sbjct: 181 NGKKRFTLNAKKAEWIGNNTWVLSKILKHVYDERGRWVAPVHRLDTLEFVSSVTPLELGK 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K D +L L N + + FH R+ L ++ + I + Sbjct: 241 KKLDSSLLSL--EQLNELCEKEPDNPKNKVLFHSRIAYTLTHIVLLFLGIPLVVGFERMS 298 Query: 301 QR--KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 + ++ ++ + + V + S + + +P + + LF IF Sbjct: 299 KNIFLRVSLCILACGVFYAVSFICSNLGNTGMVHPVLAAWMPIVLFGSVGIFFF 352 >gi|33240287|ref|NP_875229.1| putative permease [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33237814|gb|AAP99881.1| Unclassified ABC-type transport system permease [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 403 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 54/374 (14%), Positives = 130/374 (34%), Gaps = 25/374 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQ-ILQRINLVSSSTESLNILLKISGYLIPTVL 61 + ++ R + F + ++ + + + + S +L L++ +P+ L Sbjct: 32 LLDRWLFRELLPPFFFAISAFTVVSLSVGVMFDLVRKIVESGLALKFALQVFFLKLPSFL 91 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P M T + ++ N+E+ + + G S +I + L +L++ FI ++I Sbjct: 92 VISFPMAILMATLLTFSRLSSNSEVKALKSIGISTKRMIVAAITLGLLMTGITFIFNDLI 151 Query: 122 EPKCRS-------------TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN 168 P + ++ + D ++ +K N Sbjct: 152 VPSANKSAEATLRRGLGVSMHSDYVTDIMYSRFGKIVDPSSNISRDGMTHLFYAKEFQNK 211 Query: 169 TLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 T+ + ++D ++ A+ G + +DG + +P S + F++Y Sbjct: 212 TMIDVTLLDFSRLGYKQMLVAKKGYWNNLEANWEFHDGNILTIAPNGGSTS-ISFENYVY 270 Query: 229 QTESANSSTIVLKANDQNLSFLLNPNPNNPNY----RPELLETYRSEFHKRLTQWLFPVI 284 +S I D N L + Y + + ++ T + V+ Sbjct: 271 PLDSGPKK-IAKIPKDANYMTLSDAYKAKDLYKLSGNLKEVRRMEVRIQEKFTLPMACVV 329 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 F LI A + + + I L ++ ++ S++ + + P + + Sbjct: 330 FSLIGSSLACSPNTRSTQGQGFALSIVLILA---YYILSFVFSSLGVSGALSPFVGAWSP 386 Query: 345 CISSI--FLLMIKK 356 I S+ L ++ K Sbjct: 387 VIISLSGGLYLLNK 400 >gi|24114287|ref|NP_708797.1| hypothetical protein SF3026 [Shigella flexneri 2a str. 301] gi|30064334|ref|NP_838505.1| hypothetical protein S3227 [Shigella flexneri 2a str. 2457T] gi|24053443|gb|AAN44504.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|30042591|gb|AAP18315.1| hypothetical protein S3227 [Shigella flexneri 2a str. 2457T] gi|281602370|gb|ADA75354.1| putative permease, YjgP/YjgQ family [Shigella flexneri 2002017] gi|313648097|gb|EFS12543.1| hypothetical protein SF2457T_3697 [Shigella flexneri 2a str. 2457T] gi|332752655|gb|EGJ83040.1| hypothetical protein SFK671_3613 [Shigella flexneri K-671] gi|332754439|gb|EGJ84805.1| hypothetical protein SF274771_3586 [Shigella flexneri 2747-71] gi|332765461|gb|EGJ95679.1| hypothetical protein SF293071_3543 [Shigella flexneri 2930-71] gi|333014735|gb|EGK34080.1| hypothetical protein SFK304_3819 [Shigella flexneri K-304] Length = 359 Score = 100 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 48/360 (13%), Positives = 124/360 (34%), Gaps = 3/360 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDGVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + +L+ + + + + ++ S N + + Sbjct: 181 DLSLESYIYARSATIEDDKTWVLHGVNHKKWLNGKETLETLDNLAWQSAFTSMNLEELSM 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + Y ++L Q + + L+++ Sbjct: 241 PGNTFSVRQL-NHYIHYLQETGQPSSEYHLALWEKLGQPILTLAMILLAVPFTFSAPRSP 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + + + + + + +++ P+ L L + L + Y + Sbjct: 300 --GMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYWYDR 357 >gi|46580073|ref|YP_010881.1| permease [Desulfovibrio vulgaris str. Hildenborough] gi|120602469|ref|YP_966869.1| permease YjgP/YjgQ family protein [Desulfovibrio vulgaris DP4] gi|46449489|gb|AAS96140.1| permease, putative [Desulfovibrio vulgaris str. Hildenborough] gi|120562698|gb|ABM28442.1| permease YjgP/YjgQ family protein [Desulfovibrio vulgaris DP4] gi|311233928|gb|ADP86782.1| permease YjgP/YjgQ family protein [Desulfovibrio vulgaris RCH1] Length = 360 Score = 100 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 45/362 (12%), Positives = 107/362 (29%), Gaps = 12/362 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+ R + L + + + + R++ + + N+ + P + Sbjct: 1 MTLLFRYLFRNNLQVILPTLAVGTGLYLLSDLFDRLDDILEAGVPGNVAIWYFVAKTPLI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P F + L M+R+ EL+ + G S + + + +L ++ + Sbjct: 61 ISQILPAVFLLAALIQLCLMSRDRELMALQAGGVSFGAIARFFVVYGLLWAVLQLGFSQV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF-IVDSR 179 + ++ + T + + DD+ I + P F Sbjct: 121 LGVAGERESARIWQEQVRGRTPGTRDLTNVWFTDDNHVIHLEVVTPALRKGQGFAAYGLA 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 H ++ + L D EV + + Sbjct: 181 ADGIHIDTVIRAKAFTGTAGTWKLQDVEVFSTRDFGHAKLPEMSIAIGQDPQDFAVIDPG 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L L + +E R+ +H +L V+ GL+++ Sbjct: 241 ADPQRLPLWQLGDAVEK-LRTAGSNVEGLRTAWHMKLAYAASLVVMGLLAVAMVTW---- 295 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF----LFCISSIFLLMIK 355 + ++L +F + F I + Q P + + L + + L++ Sbjct: 296 -RDNIYLATGLALVFTFLFYTMF-TIGSTLGQKGIVSPPIAAWGADILVGVVASARLLLV 353 Query: 356 KK 357 + Sbjct: 354 LR 355 >gi|295690097|ref|YP_003593790.1| permease YjgP/YjgQ family protein [Caulobacter segnis ATCC 21756] gi|295432000|gb|ADG11172.1| permease YjgP/YjgQ family protein [Caulobacter segnis ATCC 21756] Length = 400 Score = 100 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 61/364 (16%), Positives = 121/364 (33%), Gaps = 11/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + Y+LR + + V + +IL+ ++ +S S+ + +++ L+P Sbjct: 6 MRLIDRYLLRLLFWPLVGCLGVTVVALLLERILRLLDALSQSSARFGYVAQLAANLVPHY 65 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P F + V+ ++ +E+ + +G S + P L + + LS+F I Sbjct: 66 LGLALPVAFFVALFIVIAKLSDGSEVDALLASGQSLERIAAPFLAVGLFLSVFSLIVFGY 125 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 ++P R + + A A L F L S +L +FI Sbjct: 126 MQPYSRYAYRAVMHAAINAGWNGRLAGGAFIDDKGSLLTADSADIAGQSLTRVFIRRLDA 185 Query: 181 TQTHKIYYAQSGSIDLDR----QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN-- 234 +I A S ++ +D + L DG + + F S T QT A Sbjct: 186 KGREEIITAGSANLKMDPGGKTVTMDLRDGR-RIVRDDNGQYRNLAFNSLTTQTPLAAAA 244 Query: 235 --SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + L L + T SE + RL + F L++ Sbjct: 245 VLLRDRGGDERELTLGEL--ATQAKSPHPVVSKSTLLSELYGRLARAAFLPFLPLLAFPL 302 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 + + + L + + + LF +++L Sbjct: 303 GLASKRGNRAAGLIMAGVLLLAFQHALLLGQSLAKADKVAAAPAIWIPFALFSSFAVWLF 362 Query: 353 MIKK 356 + + Sbjct: 363 LGSR 366 >gi|169797502|ref|YP_001715295.1| hypothetical protein ABAYE3538 [Acinetobacter baumannii AYE] gi|184156574|ref|YP_001844913.1| permease [Acinetobacter baumannii ACICU] gi|213155684|ref|YP_002317729.1| permease YjgP/YjgQ family protein [Acinetobacter baumannii AB0057] gi|215484938|ref|YP_002327177.1| hypothetical protein ABBFA_003301 [Acinetobacter baumannii AB307-0294] gi|239502070|ref|ZP_04661380.1| hypothetical protein AbauAB_07127 [Acinetobacter baumannii AB900] gi|260556394|ref|ZP_05828613.1| permease YjgP/YjgQ family protein [Acinetobacter baumannii ATCC 19606] gi|301346543|ref|ZP_07227284.1| hypothetical protein AbauAB0_09866 [Acinetobacter baumannii AB056] gi|301512955|ref|ZP_07238192.1| hypothetical protein AbauAB05_15269 [Acinetobacter baumannii AB058] gi|301594833|ref|ZP_07239841.1| hypothetical protein AbauAB059_03452 [Acinetobacter baumannii AB059] gi|332851502|ref|ZP_08433499.1| permease, YjgP/YjgQ family [Acinetobacter baumannii 6013150] gi|332866798|ref|ZP_08437202.1| permease, YjgP/YjgQ family [Acinetobacter baumannii 6013113] gi|332874942|ref|ZP_08442793.1| permease, YjgP/YjgQ family [Acinetobacter baumannii 6014059] gi|169150429|emb|CAM88326.1| conserved hypothetical protein; putative membrane protein [Acinetobacter baumannii AYE] gi|183208168|gb|ACC55566.1| predicted permease [Acinetobacter baumannii ACICU] gi|193076100|gb|ABO10704.2| putative membrane protein [Acinetobacter baumannii ATCC 17978] gi|213054844|gb|ACJ39746.1| permease YjgP/YjgQ family protein [Acinetobacter baumannii AB0057] gi|213988459|gb|ACJ58758.1| conserved hypothetical protein [Acinetobacter baumannii AB307-0294] gi|260410449|gb|EEX03748.1| permease YjgP/YjgQ family protein [Acinetobacter baumannii ATCC 19606] gi|322506461|gb|ADX01915.1| permease [Acinetobacter baumannii 1656-2] gi|323516340|gb|ADX90721.1| permease [Acinetobacter baumannii TCDC-AB0715] gi|332729955|gb|EGJ61286.1| permease, YjgP/YjgQ family [Acinetobacter baumannii 6013150] gi|332734406|gb|EGJ65526.1| permease, YjgP/YjgQ family [Acinetobacter baumannii 6013113] gi|332736885|gb|EGJ67861.1| permease, YjgP/YjgQ family [Acinetobacter baumannii 6014059] Length = 356 Score = 100 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 40/356 (11%), Positives = 113/356 (31%), Gaps = 4/356 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y+ + + + + + + + L + + + + P L Sbjct: 5 RIVAKYVTKTTALAMFGTTIVLSVLQILFTYLGELGEL-KPDYNAWQAFIYVLWGAPRYL 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ N+EL+++ + G S ++ V+ A+LL + F + Sbjct: 64 YEILPISALIGAVIGLGALASNSELIVMRSVGISLWRIVGWVMRSALLLIVLSFALSEWV 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + + +A + +Q + ++D Sbjct: 124 VPYTNEKAQSVKSHRSVAALGEVKGYWSREGQRFIYIDYANSQGNLRDIQ--VVDFNKDY 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + A+ G D Q + ++ + + ++ +S L + + L Sbjct: 182 HLQSLINAEQGKFIQDGQWTLQKASQMDILTDGNSILNNHDQQSLGLALQPKYVHMVTLD 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 D + S L++ Y ++ +TY+ F +++ + L++ + Sbjct: 242 PEDLSPSQLISFMRYMDEY-SQVPKTYQLAFWQKVASPFSLITLVLVACSFIFGPLRQQS 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I + + + F F + +L + + L+ + + Sbjct: 301 MGFRLVIALFIGLGFYYLQDFLGYASLVYAPSPAWFVLMPIILMFGAGSYLLYRAR 356 >gi|254251665|ref|ZP_04944983.1| hypothetical protein BDAG_00857 [Burkholderia dolosa AUO158] gi|124894274|gb|EAY68154.1| hypothetical protein BDAG_00857 [Burkholderia dolosa AUO158] Length = 364 Score = 100 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 54/362 (14%), Positives = 122/362 (33%), Gaps = 16/362 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ I +++ + +S +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTIMLTTMMIRIVGYAASGEVDPKDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT R++E+++ +G S LIKP+ A + + + + Sbjct: 62 VMLVVTLFVSILFVLTRWYRDSEMVVWLASGVSLTRLIKPIGVFATPIIVLIAFFAFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P K + A+ Q S L F + + + + + + + Sbjct: 122 PWSNQQSKMIKARFQQRDEISLLAPGQFRESAANHRVFFIEKMTPDQSKVQNVFVTSTEN 181 Query: 183 THKIY----YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + + ++L DG + +P + IM+F+ Y ++ S + Sbjct: 182 GKVNVVVSQTGHTETSKDGDRFVVLEDGRRYDGTPGQPNFKIMEFERYGVKITSKPIVNV 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD-KRA 297 + L L NP +N +EF R L + ++ I A Sbjct: 242 PTTSGTPTLELLRNPTRDNL-----------AEFAWRAGLPLIAINLMVLGIPLAYQNPR 290 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 R + + I L+ S + + I + L++ + I + + + Sbjct: 291 RSRTINLVMAVLIYLTYSNLLNVVQAQIEQGKMSFGVGLVGLHVIVAAIVAFIFWLRVRN 350 Query: 358 YT 359 Sbjct: 351 RP 352 >gi|145637645|ref|ZP_01793300.1| molybdate ABC transporter permease protein [Haemophilus influenzae PittHH] gi|145269168|gb|EDK09116.1| molybdate ABC transporter permease protein [Haemophilus influenzae PittHH] Length = 367 Score = 100 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 46/357 (12%), Positives = 129/357 (36%), Gaps = 19/357 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + +S + L ++ I + Q ++ + ++ +++ + G +PT+ Sbjct: 2 ILIRYLIKEVFKSQIAILLILLLIFFSQQFVRVLGAAANGNVPADLVFSLLGLGMPTMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P C + + +E+ ++ G + L+K L +++L + + + Sbjct: 62 LMLPLCLFIAILLTFGRLYAESEITVMRACGVGQRILVKVALIMSLLTAGIAAYNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + A+ T L F +++ + +N ++ +++ + Sbjct: 122 PWAIQKQVNIVEDAKANPTVGVLSSGQFISTNNNNVVLFIDKIKDNQIRNVYLFQMTPQK 181 Query: 183 --THKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G + Q + L + + + + D I F Y + Sbjct: 182 QTKPSVVTAEKGELIALPNGDQVLNLKNTKRVEGTSVLPDFRITHFDEYRAYLGYQAAEN 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +A + LS L++ + ++ ++E H R+T L + LI++ Sbjct: 242 TNDEAAELTLSQLIDLDSSSA----------KAELHWRITLILAVPLMALIAVPL---SR 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-PYYIPILYLFLFCISSIFLLM 353 + ++ + I +L + F S ++ L + +++ Sbjct: 289 VNPRQGRFAKILPALLLYLIYFLLQSSFKSAGAAGKLEAELLMPLVNIGFFLLAVVL 345 >gi|332187157|ref|ZP_08388897.1| hypothetical protein SUS17_2305 [Sphingomonas sp. S17] gi|332012857|gb|EGI54922.1| hypothetical protein SUS17_2305 [Sphingomonas sp. S17] Length = 399 Score = 100 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 53/362 (14%), Positives = 124/362 (34%), Gaps = 10/362 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MKS + Y+ R I + + + + +I + V++ ++++ ++ L+P Sbjct: 1 MKSIDRYMARLIALPLFATLIIAAMLLVLDRIRRLFEFVATEGGPISVVWRMLANLLPEY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + + ++EL ++ G S L++ AI+L+ Sbjct: 61 LGLGIPIGLMLGILLAFRRLATSSELDVMRGVGMSYTRLLRVPYMYAIVLAALNLAIVGY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISK-YNPNNTLQGIFIVDSR 179 ++P R + L + + + ++ F L + + ++I + + L GIF+ + Sbjct: 121 VQPIARYYYEGLRYELRTGALGASIKVGEFTHLGNRMTLRIEESRDSGRDLSGIFVHANT 180 Query: 180 DTQTHKIYYAQSGSIDLDRQ----AIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN- 234 A+ G L +G + P + ++ F S+ L + Sbjct: 181 SKGDWIGVTAERGRFLATDDPNVIIFRLTNGTLIHNRPEFRAPRVLTFSSHDLPIDLPKF 240 Query: 235 --SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + + L L P+ R+EFH RL + + + L+++ Sbjct: 241 DNFRQRGGRDLEFTLPELAKLGHEAPSAEARAGS--RAEFHFRLVEVVTMFLLPLLAVSL 298 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 + + L V + I +P + +F ++ Sbjct: 299 GIPPKRSTSALGVFLSIVMLVTYHKVNQYAADIGALGRVDPLIALWVPFAIFAGLVGWMY 358 Query: 353 MI 354 + Sbjct: 359 YV 360 >gi|229845239|ref|ZP_04465372.1| hypothetical protein CGSHi6P18H1_02459 [Haemophilus influenzae 6P18H1] gi|229811834|gb|EEP47530.1| hypothetical protein CGSHi6P18H1_02459 [Haemophilus influenzae 6P18H1] Length = 367 Score = 100 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 46/357 (12%), Positives = 128/357 (35%), Gaps = 19/357 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + +S + L ++ I + Q ++ + ++ +++ + G +PT+ Sbjct: 2 ILIRYLIKEVFKSQIAILLILLLIFFSQQFVRVLGAAANGNVPADLVFSLLGLGMPTMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P C + + +E+ ++ G + L+K L +++L + + + Sbjct: 62 LMLPLCLFIAILLTFGRLYAESEITVMRACGVGQRILVKVALIMSLLTAGIAAYNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + A+ T L F +++ + +N ++ +++ + Sbjct: 122 PWAIQKQVNIVKDAKANPTVGVLSSGQFISTNNNNVVLFIDKIKDNQIRNVYLFQMTPQK 181 Query: 183 --THKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G + Q + L + + + + D I F Y + Sbjct: 182 QTKPSVVTAEKGELIALPNGDQVLNLKNTKRVEGTSVLPDFRITHFDEYRAYLGYQAAEN 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +A + LS L++ + + ++E H R+T L + LI++ Sbjct: 242 TNDEAAELTLSQLIDLD----------SSSVKAELHWRITLILAVPLMALIAVPL---SR 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-PYYIPILYLFLFCISSIFLLM 353 + ++ + I +L + F S ++ L + +++ Sbjct: 289 VNPRQGRFAKILPALLLYLIYFLLQSSFKSAGAAGKLEAELLMPLVNIGFFLLAVVL 345 >gi|126728788|ref|ZP_01744603.1| permease, YjgP/YjgQ family protein [Sagittula stellata E-37] gi|126710718|gb|EBA09769.1| permease, YjgP/YjgQ family protein [Sagittula stellata E-37] Length = 364 Score = 100 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 42/359 (11%), Positives = 105/359 (29%), Gaps = 13/359 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y R FL ++ ++ + + S L++ +P L Sbjct: 2 TLHFYYARRFLSLFLGIFAVFALFQGLLDLIDELRQL-GDEVSFGETLQLVILKLPEGLY 60 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + T + + R++EL+ G S +T + +A+L+ + N I Sbjct: 61 EILPLVMILATVAMFIGLARSSELVATRAAGRSGLTALMAPATVALLIGAIIVAMMNPIV 120 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFR------LDDDLYIKISKYNPNNTLQGIFIV 176 L + T + + L + IV Sbjct: 121 AATSKRYADLRETYESGNTSAVSFGPEGLWLRQGGEDGQSVIRAARANPEATELYDVSIV 180 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ--TESAN 234 + + D + + ++ ++ Y L + Sbjct: 181 TYAPDGGPAMRIQAESAALSDGAWHLTDAKAWPLTPGLNPELGARLHVEYELPSTLTRES 240 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + + + L + ++ L + LF V L+ Sbjct: 241 IRDRFGRPSAVAIWDL-PQFIAGLEESGFSARRHIVWYNMELARPLFLVAMVLVGAAFTM 299 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + R + + ++ + FG+++ S+ + +N P++ ++ +S+ L + Sbjct: 300 QP--TRLARTGLAVLSAVLLGFGLYYVRSFAQ-IMGENGQLAPVVAAWVPPTASVLLAL 355 >gi|261345121|ref|ZP_05972765.1| membrane protein, YjgP/YjgQ family [Providencia rustigianii DSM 4541] gi|282566809|gb|EFB72344.1| membrane protein, YjgP/YjgQ family [Providencia rustigianii DSM 4541] Length = 358 Score = 100 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 48/355 (13%), Positives = 120/355 (33%), Gaps = 2/355 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI R I S LM+ +V ++ +I+ ++++ V + + +P + + Sbjct: 5 LDRYIGRTILNSILMALFLLVSLSGIIKFVEQLRKVGDGDYTAMSAGVFTLLTVPKDIDI 64 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + + L ++ +EL+++ +G +R+ + V+ AI L I + + P Sbjct: 65 FFPMAALLGSLLGLGALASRSELVVMQASGFTRLQIAMSVMKTAIPLVIVAMLIGEWVAP 124 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + A+ + + + ++ + D S + NN + Sbjct: 125 AGDQWARNYRAEKIVGNSLVATDSGMWAKDAHDFIYIQSIKDANNIQDVSIYRFDDQRKL 184 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK-SYTLQTESANSSTIVLKA 242 + +A G+ D +++ +L+ + S K + + + L A Sbjct: 185 KSVMFAARGTYDANKKLWVLSQVDESILSSQQKITGSQRLTYEWQTNLTPEKLGIVSLHA 244 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++ L +L Y+ +++ L + L+++ Sbjct: 245 DSLSIRGLYQ-YITYLKESGQLASVYQLSMWQKILAPLSAAVMMLMAVSFIFGPLRTVPM 303 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I F + + P I + + L++K+K Sbjct: 304 GVRVVSGIVGGFLFYILNQGFGNWSLVYSIPPVIAAALPSVLFLGVSIFLLVKRK 358 >gi|251792100|ref|YP_003006820.1| 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [Aggregatibacter aphrophilus NJ8700] gi|247533487|gb|ACS96733.1| 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase [Aggregatibacter aphrophilus NJ8700] Length = 367 Score = 100 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 47/357 (13%), Positives = 127/357 (35%), Gaps = 19/357 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + +S + ++ I + Q+++ + ++ +++ + G +PT+ Sbjct: 2 ILTRYLTKEVFKSQIAILFILLLIFFCQQLVRVLGSAANGQVPADLVFSLLGLGMPTMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P C + L + +E+ ++ G + L+K VL L++ + + + Sbjct: 62 LMLPLCLFIAILLTLGRLYAESEITVMRACGIGQRILVKIVLILSLFTAAVAAYNALWLT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ +A+ L F ++ ++ +N + +++ ++ Sbjct: 122 PWAIHKQTEIVEEAKANPNMGALSAGQFMTANNSDFVLFIDNIQDNQINNVYVFQTQPKG 181 Query: 183 --THKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G + Q + L + + + I D I F Y + Sbjct: 182 QSKPSVIVAEKGELKALPNGDQILNLQNSDRFEGTAILPDFRITHFDEYQAYLGHKTVAD 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +A + ++ L N ++EFH RLT L I L+++ Sbjct: 242 DADEAGEMDIMQLWNA----------NAPAMKTEFHWRLTLILAVPIMALLAVPL---SR 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-PYYIPILYLFLFCISSIFLLM 353 + ++ + + +L + F S + + L ++ + + Sbjct: 289 VNPRQGRFAKVLPALLLYLIYFLLQSSLKSAGGAGKLDASLFMPLVNIAFFALAIFL 345 >gi|19704365|ref|NP_603927.1| hypothetical protein FN1030 [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19714617|gb|AAL95226.1| Hypothetical membrane-spanning protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 363 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 53/362 (14%), Positives = 118/362 (32%), Gaps = 11/362 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K ++YI + + FLM+ + + + + Q + I ++ + + L+P + Sbjct: 3 KKMDIYISKYFIKFFLMNIIGFMGVFLLAQTFKIIKYINQGKLAGGEIFDYILNLLPKMF 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + ++ M N E++ + +G + +++ L +A ++S+F+F N I Sbjct: 63 VETAPLSVLLAGLITISIMASNLEIVSLKTSGIRFLRIVRAPLIIAFVISLFVFFVNNSI 122 Query: 122 EPKCRSTIKQLSA-----KAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 K + I +L T L KI++ + Sbjct: 123 YTKSLAKINFYRRGEIDETLKLPTTKENAFFINNTEGYLYLMGKINRETGLAENIEVVKF 182 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 ++ ++ +I A+S D + I ++ ++ I + S Sbjct: 183 NTEISKPKEIITAKSAKFDTEENKWIFSNVNIYNVETKETTAKIEYKSNLYKDDPSNFIK 242 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L N E Y +E KR + I I + Sbjct: 243 ASAEDPRMLTIKELKKTIKEQKNI-GEDTRIYLAELAKRYSFPFASFIVAFIGLSV--SS 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMI 354 VR + + I + +G + S + N P + ++ I + + Sbjct: 300 KYVRGGRTTMNLVICVVAGYGYYLV-SGAFEAMSLNGILNPFIASWVPNILYLIIGIYFM 358 Query: 355 KK 356 + Sbjct: 359 NR 360 >gi|78049235|ref|YP_365410.1| YjgP/YjgQ family permease [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325925500|ref|ZP_08186891.1| putative permease [Xanthomonas perforans 91-118] gi|78037665|emb|CAJ25410.1| putative YjgP/YjgQ family permease [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325544092|gb|EGD15484.1| putative permease [Xanthomonas perforans 91-118] Length = 368 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 43/363 (11%), Positives = 102/363 (28%), Gaps = 11/363 (3%) Query: 5 ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 + Y+ R + + L++ ++ + V + + + + Y +P + Sbjct: 9 DWYVGRVVLFTVLLTWAVLLGLDLVNAFASEAKNIGQGSYTFGHAVAYVAYTVPRRAYTL 68 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P + L + +EL + G SR + V+ LL+ + IS I P Sbjct: 69 FPTAAVIGALMGLGQLAATSELTALRALGVSRKRMSASVVAAMALLTASMVISGETIGPW 128 Query: 125 CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKI--------SKYNPNNTLQGIFIV 176 ++ L A A+ + + + D ++ L + + Sbjct: 129 AQNQADTLKASARFNSDMASSRYAGLWAREGDTFLNALSGEEKLLDGGGTALDLHDVRLY 188 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + S + D L S + Q A + Sbjct: 189 HLDPSGRMQQLTYASVAEHRDG-RWTLRQVRRDTFQERSVQRETFPELPWQSQLNPAALA 247 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + K + + L + Y ++ R L + + +I + Sbjct: 248 AGLAKPRNLSAHDL-EQSIEYRRRNGLDARDYEDQYWSRWFYPLNVLALCMAAIPFSFGS 306 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 K + I ++ F + F Y L + + + ++ Sbjct: 307 LRSGGLGKRLFLGILFALGFWLLQLFFG-RMAGALKLDYRIAYALPPMVMLGVSAWLFRR 365 Query: 357 KYT 359 + + Sbjct: 366 RSS 368 >gi|319776036|ref|YP_004138524.1| permease [Haemophilus influenzae F3047] gi|329123194|ref|ZP_08251763.1| inner membrane protein YjgP [Haemophilus aegyptius ATCC 11116] gi|317450627|emb|CBY86847.1| Predicted permease [Haemophilus influenzae F3047] gi|327471539|gb|EGF16983.1| inner membrane protein YjgP [Haemophilus aegyptius ATCC 11116] Length = 367 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 48/354 (13%), Positives = 128/354 (36%), Gaps = 15/354 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + +S + L ++ I + Q ++ + ++ +++ + G +P + Sbjct: 2 ILIRYLIKEVFKSQIAILLILLLIFFSQQFVRVLGAAANGNVPADLVFSLLGLGMPIMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P C + + +E+ ++ G + L+K L +++L + + + Sbjct: 62 LMLPLCLFIAILLTFGRLYAESEITVMRACGVGQRILVKVALIMSLLTAGIAAYNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + A+ T L F +++ + +N ++ +++ + Sbjct: 122 PWAIQKQVNMVEDAKANPTVGVLSSGQFISTNNNNVVLFIDKIKDNQIRNVYLFQMTPQK 181 Query: 183 --THKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G + Q + L + + + D I F Y ++ Sbjct: 182 QTKPSVITAEKGELIALPSGDQVLNLKNTKRVEGTSALPDFRITHFDEYHAYLGYQSAEN 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + LS L++ + ++ ++E H R+T L + LI++ + Sbjct: 242 TNDEVAELTLSQLIDLDSSSA----------KAELHWRITLILAVPLMALIAVPLSRVNP 291 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + KI P + I F + F + + L F + ++ L Sbjct: 292 RQGRFAKILPALLLYLIYFLLQSSFKSAGSAGKLEAELLMPLVNIGFFLLAVVL 345 >gi|295690098|ref|YP_003593791.1| permease YjgP/YjgQ family protein [Caulobacter segnis ATCC 21756] gi|295432001|gb|ADG11173.1| permease YjgP/YjgQ family protein [Caulobacter segnis ATCC 21756] Length = 353 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 44/351 (12%), Positives = 106/351 (30%), Gaps = 8/351 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK +LY+LR + L + L ++ I ++ +L + + + + +P + Sbjct: 1 MK-LQLYVLRTVATRILGAALILMSILQILDLLDVTTDILDRGLGMAGVAYYAALRLPRL 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 V P + + R + ++ + +G S ++ + I + + + + Sbjct: 60 FEQVAPIAVLAGGLFAFSQLARESAVVAMRASGISGYRIVGMAMPAVIAVMLLDALCGQV 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ T+ F DL I + + I Sbjct: 120 LAPRSDPTLADWWRNTTPVAERKAPSPRTFR-AGSDLVIGADASADGREITSLTIFRRNA 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 S ++ D + L + R + S ++ + + Sbjct: 179 KGILVEKVEASKALY-DGRRWTLQSPKTTRFAGDLAQTSTAASINWPTALRPQDVQGLFG 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + + N + RPE Y + F ++ L+S A Sbjct: 238 DDSAPTAATARRALENGGSDRPESF--YATHFQSAFASPFVSLVMLLLSAPVALANFRSG 295 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 Q + + + F V + ++ + ++ P+L ++ L Sbjct: 296 QGAVLLTAGLGAGLLFLV---ANGMLTALGESGALSPLLAVWAAPAIFGAL 343 >gi|237741965|ref|ZP_04572446.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13] gi|256845305|ref|ZP_05550763.1| conserved hypothetical protein [Fusobacterium sp. 3_1_36A2] gi|229429613|gb|EEO39825.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13] gi|256718864|gb|EEU32419.1| conserved hypothetical protein [Fusobacterium sp. 3_1_36A2] Length = 359 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 55/340 (16%), Positives = 119/340 (35%), Gaps = 5/340 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YIL + +++ FI + ++ + + S+ +L++ + IP + Sbjct: 1 MKIINKYILDELKGPIILAVFVFTFIFLLDIVVTMMEHIIVKGISVFDVLRLLSFYIPPI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + T +RN+E + + +TG S ++KP+L +AI SIF+ + Sbjct: 61 LTQTIPIGMFLGIMICFTKFSRNSESVAMVSTGMSIRDILKPILAIAIGASIFIIFLQES 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P+ +K + AK L+E F D+ I + K + + + I + + Sbjct: 121 IIPRSFIKLKYVGAKIAYENPVFQLKEKTFIDNLDEYSIYVDKVSSDGKAKNIIAFEKPE 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--ANSSTI 238 + AII+ + + K I F + + + + Sbjct: 181 DKNKFPMVLTGEEAFWKDSAIIVKESQFVSFDETGKKNLIGTFDEKKVVLTAYFQDLNIK 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + +++ L+ + Y+ E ++L V +I + Sbjct: 241 IKDVEALSITDLIKGIKKIEATE---VIKYKIEIFRKLALVFSTVPLAVIGFCLSLGHHR 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 + ++ I + + + NP+ Sbjct: 298 ISKKYSFILAMIIIFAYIIFLNIGIVMASAGKLNPFIATW 337 >gi|21244279|ref|NP_643861.1| hypothetical protein XAC3554 [Xanthomonas axonopodis pv. citri str. 306] gi|21109927|gb|AAM38397.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 368 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 42/364 (11%), Positives = 104/364 (28%), Gaps = 13/364 (3%) Query: 5 ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 + Y+ R + + L++ ++ + V + + + + + Y +P + Sbjct: 9 DWYVGRVVLFTVLLTWAVLLGLDLVNALASEAKNIGQGSYTFGHAVAYVAYTVPRRAYTL 68 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P + L + +EL + G SR + V+ LL+ + IS I P Sbjct: 69 FPTAAVIGALMGLGQLAATSELTALRALGVSRKRMSASVVAAMALLTASMVISGETIGPW 128 Query: 125 CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKI--------SKYNPNNTLQGIFIV 176 ++ L A A+ + + + D ++ L + + Sbjct: 129 AQNQADTLKASARYNSDMASSRYAGLWAREGDTFLNALSGEEKLLDGGGTALDLHDVRLY 188 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + S + D L S + Q A + Sbjct: 189 HLDSSGRMQQLTYASVAEHRDG-RWTLRQVRRDTFQERSVQRETFPELPWQSQLNPAALA 247 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + K + + L + Y ++ R L + + +I + Sbjct: 248 AGLAKPRNLSAHDL-EQSIEYRRRNGLDARDYEDQYWSRWFYPLNVLALCMAAIPFSFGS 306 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-NPYYIPILYLFLFCISSIFLLMIK 355 R +F+ + + G + + Y L + + + + Sbjct: 307 L--RSGGLGKRLFLGILFALGFWLLQLFFGRMAGALKLDYRIAYALPPMVMLGVSAWLFR 364 Query: 356 KKYT 359 ++ + Sbjct: 365 RRSS 368 >gi|332530549|ref|ZP_08406487.1| permease YjgP/YjgQ [Hylemonella gracilis ATCC 19624] gi|332039995|gb|EGI76383.1| permease YjgP/YjgQ [Hylemonella gracilis ATCC 19624] Length = 372 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 54/368 (14%), Positives = 120/368 (32%), Gaps = 15/368 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS---TESLNILLKISGYLIPT 59 + + R I + L + + + +++ V L L L P Sbjct: 6 TLRRLLFREILFTASFVTLAFLALFVFFDFIDQLSAVGRPDRPGFELPQALIYVVLLAPG 65 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 L + P + T V+T + +++E I+ +G + +L + + F+ + Sbjct: 66 HLYELLPITVLIGTIYVMTRLAQSSEFTILRTSGLGPWRALAMLLTAGGVFASATFVIGD 125 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD--LYIKISKYNPNNTLQGIFIVD 177 + P + A+ + + + I I P+ TLQ + I + Sbjct: 126 YLSPWSNQVAQAYRAQFRKEGASTIKGGAWLREREPYAKYGINIGALLPDGTLQRVRIYE 185 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK-----SYTLQTES 232 + S + + Q+ L E + D+ ++ + + Sbjct: 186 IDNAGNLVSTLQASTARINNDQSWTLMGVERTEFNAAGPDVRRIETTQLPSYRWPTGISA 245 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 S VL + N L + + E Y +F K++ L ++ ++++ Sbjct: 246 EMISAAVLDPDRMNTVDLF-LYIGHLEDNAQNAERYEIQFWKKVFYPLSCLVMVMMALPF 304 Query: 293 ADKRALVRQRKKIHPIFISLSI-SFGVFWGFSYIIHKIEQNPYYI---PILYLFLFCISS 348 A + + + F + F YI P+ P L LF +++ Sbjct: 305 AYLHFRNQGISLYVFGGVMAGVTFFFLNSMFGYIGELRHWTPWIAAATPGLIFMLFSLAA 364 Query: 349 IFLLMIKK 356 L++K+ Sbjct: 365 FAWLVLKR 372 >gi|294625210|ref|ZP_06703851.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294664572|ref|ZP_06729914.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292600484|gb|EFF44580.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292605656|gb|EFF48965.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 368 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 43/363 (11%), Positives = 102/363 (28%), Gaps = 11/363 (3%) Query: 5 ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 + Y+ R + + L++ ++ + V + + + + Y +P + Sbjct: 9 DWYVGRVVLFTVLLTWAVLLGLDLVNAFASEAKNIGQGSYTFGHAVAYVAYTVPRRAYTL 68 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P + L + +EL + G SR + V+ LL+ + IS I P Sbjct: 69 FPTAAVIGALMGLGQLAATSELTALRALGVSRKRMSASVVAAMALLTASMVISGETIGPW 128 Query: 125 CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKI--------SKYNPNNTLQGIFIV 176 ++ L A A+ + + + D ++ L + + Sbjct: 129 AQNQADTLKASARYNSNMASSRYAGLWAREGDTFLNALSGEEKLLDGGGTALDLHDVRLY 188 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + S + D L S + Q A + Sbjct: 189 HLDSSGRMQQLTYASVAEHRDG-RWTLRQVRRDTFQERSVQRETFPELPWQSQLNPAALA 247 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + K + + L + Y ++ R L + + +I + Sbjct: 248 AGLAKPRNLSAHDL-EQSIEYRRRNGLDARDYEDQYWSRWFYPLNVLALCMAAIPFSFGS 306 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 K + I ++ F + F Y L + + + ++ Sbjct: 307 LRSGGLGKRLFLGILFALGFWLLQLFFG-RMAGALKLDYRIAYALPPMVMLGVSAWLFRR 365 Query: 357 KYT 359 + + Sbjct: 366 RSS 368 >gi|206561015|ref|YP_002231780.1| putative permease [Burkholderia cenocepacia J2315] gi|198037057|emb|CAR52978.1| putative permease protein [Burkholderia cenocepacia J2315] Length = 364 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 52/364 (14%), Positives = 123/364 (33%), Gaps = 16/364 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ I +++ + +S +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTIMLTTMMIRIVGYAASGEIDPRDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT R++E+++ +G S LIKP+ A + + + + Sbjct: 62 VMLVVTLFVSILFVLTRWYRDSEMVVWLASGVSLTRLIKPIGVFAAPIILLITFFAFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P K + A+ Q S L F + + + + + + + Sbjct: 122 PWSNQQSKMIKARFQQRDEISLLAPGQFRESAANHRVFFIEKMSPDQSKVQNVFVTSTEN 181 Query: 183 THKIY----YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + + ++L DG + +P + IM+F+ Y ++ S + + Sbjct: 182 GKVNVVVSQTGHTETSKDGDRFVVLEDGRRYDGTPGQPNFKIMEFERYGVKITSKPVTNV 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD-KRA 297 + L NP +N +EF R L + ++ I + Sbjct: 242 QTTNSTPTPDLLRNPTRDNL-----------AEFAWRAGLPLIAINLMVLGIPLSYQNPR 290 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 R + + I L+ S + + I + L++ + I + + + Sbjct: 291 RSRTINLVMAVLIYLTYSNLLNVVQAQIEQGKMSFGVGLVGLHVIVAAIVAFIFWLRVRN 350 Query: 358 YTKI 361 + Sbjct: 351 RPLL 354 >gi|326336103|ref|ZP_08202275.1| permease YjgP/YjgQ family protein [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691612|gb|EGD33579.1| permease YjgP/YjgQ family protein [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 359 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 40/362 (11%), Positives = 112/362 (30%), Gaps = 5/362 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL+ ++ L + I ++ ++ ++ + ++K + Sbjct: 1 MKIIDRYILKRYFLTYSALFLMFIPIGILVDFAEKNQKMTDNHAPTEAIIKYYANFVIHF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + + + TE++ + ++G S ++P + A +LS+F+ I Sbjct: 61 ANILFPIFLFLSVIWFTSKLAEKTEIVAMLSSGISYNRFLRPYFYGATILSVFVLIMGMF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + +S ++ S NN + Sbjct: 121 VVPYSSGVYNEFYGTYLSPNLYSKGSRLYNQVNKNEYIYVSSFDANNNQGSDFVLERFDG 180 Query: 181 TQTHKIYYAQSGSIDLDR--QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + A + + + L+ + + K L ++ + I Sbjct: 181 LKMTDKITASNIQWIENDSIKTYRLSYYTHRKVGEFDDIYEQVIQKDTLLNFKTTDLLPI 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 A +N L + Y +++R I +I + ++ Sbjct: 241 EYAAETKNFFELNKFIAEERQKGSPNIRIYELVYYRRWAAIFNVFILTIIGVAV---SSV 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 ++ + + I F + E++ + + + ++ + + +K Sbjct: 298 KKRGGMGVNLAFGVLIGFSYVFFERIFGIMAEKSGITPLMAVIIPNAMFALLAVYMIRKS 357 Query: 359 TK 360 + Sbjct: 358 RR 359 >gi|301017326|ref|ZP_07182090.1| conserved hypothetical protein [Escherichia coli MS 69-1] gi|300400299|gb|EFJ83837.1| conserved hypothetical protein [Escherichia coli MS 69-1] Length = 359 Score = 99.7 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 50/360 (13%), Positives = 124/360 (34%), Gaps = 3/360 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + IL+ + + + ++ S N + + Sbjct: 181 DLSLESYIFARSASIEDDKTWILHGVNHKKWLNGKETLETSDNLAWQSAFTSMNLEELSM 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + YR ++L Q + + L+++ Sbjct: 241 PGNTFSVRQL-NHYIHYLQETGQPSSEYRLALWEKLGQPILTLAMILLAVPFTFSAPRSP 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + + + + + + +++ P+ L L + L + Y + Sbjct: 300 --GMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVMMALSLVYWYDR 357 >gi|21230126|ref|NP_636043.1| hypothetical protein XCC0651 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769883|ref|YP_244645.1| hypothetical protein XC_3583 [Xanthomonas campestris pv. campestris str. 8004] gi|21111656|gb|AAM39967.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575215|gb|AAY50625.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] Length = 368 Score = 99.7 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 44/371 (11%), Positives = 102/371 (27%), Gaps = 15/371 (4%) Query: 1 MKSF----ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYL 56 MK + Y+ R + + L++ ++ + V + + S + Y Sbjct: 1 MKLMPRVHDWYVGRAVLFTVLLTWAVLLGLDVVNAFASEAKSIGQGSYSFGHAIAFVAYT 60 Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 +P + P + L + +EL + G SR + V+ LL+ + I Sbjct: 61 VPRRAYTLFPTAAVIGALMGLGQLAATSELTALRALGVSRKRMSASVVVAMALLTATMVI 120 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKI--------SKYNPNN 168 S + P +S L A+ + + + + D ++ Sbjct: 121 SGETVGPWAQSQADTLKTSARYQSDMTSARYSGLWAREGDTFLNALSGEEQLLDNGGTAL 180 Query: 169 TLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 TL + + + + L S + Sbjct: 181 TLHDVRLYHLDANGQMQQLTYA-AVAEHREGRWTLRQVRRDTFQARSVQRETFPELPWQS 239 Query: 229 QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 Q + + K + ++ L + Y ++ R L + L Sbjct: 240 QLNPKALAAGLAKPRNLSVHDL-GQSIEYRRRNGLDASDYEDQYWSRWFYPLNVLALCLA 298 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 +I + K + I ++ F + F Y L + Sbjct: 299 AIPFSFGSLRSGGLGKRLFLGILFALGFWLLQLFFG-RMAGALKLDYRIAYALPPMVMLG 357 Query: 349 IFLLMIKKKYT 359 + + +++ + Sbjct: 358 VSAWLFRRRSS 368 >gi|260914418|ref|ZP_05920887.1| inner membrane protein YjgP [Pasteurella dagmatis ATCC 43325] gi|260631519|gb|EEX49701.1| inner membrane protein YjgP [Pasteurella dagmatis ATCC 43325] Length = 368 Score = 99.7 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 45/357 (12%), Positives = 132/357 (36%), Gaps = 19/357 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + +S + ++ I + Q+++ + ++ +++L + G +PT+ Sbjct: 2 ILTRYLIKEVFKSQIAILFILLLIFFCQQLVRVLGSAANGKVPADLVLSLLGLGMPTMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P C + + +E+ ++ G + L++ V+ L++L + + + Sbjct: 62 LMLPLCLFIAILLTFGRLYAESEITVMRACGVGQRILVRVVMLLSLLTASIATYNVFWLT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + ++ +A+ T L F + + ++ +N + +++ +R+ Sbjct: 122 PWAINKQSEILQEAKANPTMGALAAGQFISTNSNEFVLFIDKIVDNQINDVYLFQTRERG 181 Query: 183 T-----HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + S+ Q + L + E S D I F Y + + Sbjct: 182 NLKPAVLVAERGELKSLPNGDQILTLENSERVEGSAALPDFRITHFDEYQAYLGHQDINN 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +A + +++ LLN ++E + R++ + L++++A Sbjct: 242 EKNEAEELSVNELLN----------STSPAAKAELNWRVSL---VLAVPLMALIAVPLSR 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-PYYIPILYLFLFCISSIFLLM 353 + ++ + + +L + F S + ++ + LL+ Sbjct: 289 VNPRQGRFAKVLPALLLYLIYFLLQSSLKSAWGSGKLDGAFLMPFVNLVFFMLGLLL 345 >gi|332299879|ref|YP_004441800.1| permease YjgP/YjgQ family protein [Porphyromonas asaccharolytica DSM 20707] gi|332176942|gb|AEE12632.1| permease YjgP/YjgQ family protein [Porphyromonas asaccharolytica DSM 20707] Length = 361 Score = 99.7 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 48/359 (13%), Positives = 122/359 (33%), Gaps = 7/359 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK-ISGYLIPTV 60 + + YI ++ S + I+ +A + ++++ + L ++ +P Sbjct: 7 STVDRYIFTQFLATYFFSIVLILAVAIAFDVTEKLDKLLQPEVPLRAIIWDYYANFVPYY 66 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +P + V + + N+E++ I + G S L+KP + A +++I F+ + Sbjct: 67 ANLFSPLFVFIAVIYVTSRLAENSEIIAILSCGVSFRRLLKPYMLGAAVIAILTFLLSSF 126 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P I+ + + ++ + ++ +S YN + + F +D + Sbjct: 127 VIPPGN-RIRIDFQNRYIKDKRITYANAIQMQVAPETFMFMSYYNDESKVGYTFSMDRFE 185 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + K + + L D + + + + Sbjct: 186 GKDLKSRMMANSIVYDTLHNWQLQDYTITYFGERQDSLLRGNQLDTIIPITPKDFLVTEG 245 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + L + R + Y E HKR+ I L+ + A R Sbjct: 246 DVEMLSTPQLYR-SIQQQRMRGAATQLYAIELHKRIAMIPASFILTLMGVSL---SARKR 301 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYT 359 + + + LS+SF ++ F + P++ +L + + + + + Sbjct: 302 KGGMGLALAVGLSLSF-LYILFMTVTSSFAVTGAMSPMVAAWLPNLVYLGISFVLYRLA 359 >gi|50119363|ref|YP_048530.1| putative permease [Pectobacterium atrosepticum SCRI1043] gi|49609889|emb|CAG73324.1| putative permease [Pectobacterium atrosepticum SCRI1043] Length = 371 Score = 99.7 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 53/354 (14%), Positives = 130/354 (36%), Gaps = 15/354 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N+++ + G +P ++ Sbjct: 2 IIIRYLVRETFKSQLAILFILLLIFFCQKLVRILGAAVDGEIPTNLVISLLGLGVPEMVQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ G + L+K L LA+ ++ I+ + Sbjct: 62 LILPLSLFLGVLMTFGRLYAESEITVMHACGLGKRVLLKAALILAMFTAVIATINVMWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +++ A+A+ + + L E F + + Q +F+ R + Sbjct: 122 PWSSMHQEEVLAEAKANPSMAALVEGQFQSAQGGNAVLFVGNVKGSEFQHVFLAQLRPSG 181 Query: 183 T--HKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A G I + Q + L++G + + + +D I F +Y + Sbjct: 182 NARPSVVVADRGHITQNEDGAQVVTLDNGSRYEGTALLRDFRITDFTNYQAVIGHQTVTL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L + + ++ R+EFH RLT + +I L+ + + Sbjct: 242 NNSDVQQMGMQALWSSDAHDA----------RAEFHWRLTLIVSVLIMALMVVPLSVVNP 291 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + + P + I F + K + +P L ++ ++ L Sbjct: 292 RQGRVLSMLPAMLLYLIFFLLQSSLRSNASKGKIDPMVWIWLTNLMYFGIAVML 345 >gi|91762159|ref|ZP_01264124.1| Predicted permease YjgP/YjgQ family protein [Candidatus Pelagibacter ubique HTCC1002] gi|91717961|gb|EAS84611.1| Predicted permease YjgP/YjgQ family protein [Candidatus Pelagibacter ubique HTCC1002] Length = 378 Score = 99.3 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 66/376 (17%), Positives = 127/376 (33%), Gaps = 16/376 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + + FL+ I I WV+Q + ++ V + K + P ++ Sbjct: 3 KIVYKKLSKDCVNFFLLVVFTISIIIWVLQAVNYLDFVIEDGHGFLVYFKYTLLSFPKII 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF + + +L EL+I N G +I I + ++ + + +I Sbjct: 63 SRIFPFTVFLAFSYILLKYENKNELVIFWNFGIKKINFINFFIKFSLWFVLISLLLNAVI 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + + L S L+ F + +L I + N L IF+ + D Sbjct: 123 TPFAQDKARSFIRSSNLDFFESVLKPKKFIDIIGNLTIYFDEKNKKGELINIFLNEKTDI 182 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS-TIVL 240 + +A++ +++D IL + + I+ IS +F NS+ T Sbjct: 183 NNSQTTFAKTAIVNIDNNKKILTLYDGKSINVINGKISEFEFSKIDYNISKFNSNTTTYQ 242 Query: 241 KANDQNLSFLLNP---------------NPNNPNYRPELLETYRSEFHKRLTQWLFPVIF 285 K + L+ N N R + LE E + RL + L+ Sbjct: 243 KTQETKTINLIKCSLFFNGSIINSTNIEIENIKNCRLDNLENVYKELYSRLVKPLYITFL 302 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC 345 IS++ K + F +F S + ++ + Sbjct: 303 ISISLLFILKSKSDHSFNINKFKIYLFAFLFIIFLESSSKLISTNLMQNIFLSIFPLILT 362 Query: 346 ISSIFLLMIKKKYTKI 361 + +IK K K+ Sbjct: 363 LIIYLYFVIKLKINKV 378 >gi|300727713|ref|ZP_07061099.1| permease, YjgP/YjgQ family [Prevotella bryantii B14] gi|299775001|gb|EFI71607.1| permease, YjgP/YjgQ family [Prevotella bryantii B14] Length = 409 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 48/363 (13%), Positives = 114/363 (31%), Gaps = 7/363 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPTV 60 K + YI++ ++ S + I+ I+ V+ I + + + L I+ IP Sbjct: 50 KRLDWYIIKKFIGTYFFSIILIISISIVVDINENLAKFTEYHAPLKAIVFDYYANFIPYF 109 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + + + + N+E++ I G S L++P + +L+S+ + Sbjct: 110 ANLFSALFVFIAVIFFTSKLAGNSEVIAILAAGVSFKRLMRPYMISCVLISMLNYYLSAY 169 Query: 121 IEPKCR---STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD 177 + P + L + + + + + + + + Sbjct: 170 VIPHGNVVRQNFESLYKNKKKITSADNVMLQIDKGVIVYIQHYDDRLKKGFGFSLDKFEN 229 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + Q +I + +++ + + + I+ K TL E + Sbjct: 230 KKLVDHMTAMEIQYDTISDSKYHWRMSNWKERHLRGLREHITNGNQKDTTLYMEPTDLVY 289 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L N + Y E+HKR+ I +I + + Sbjct: 290 SKGQQETFTSPQLKEYISKQKNRGSGNVVQYEVEYHKRIASSFASFILTIIGLSL---SS 346 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 R+ + + L++SF + Q + I +I L K+ Sbjct: 347 RKRKGGMGMYLGVGLALSFAYIMLQTVSSTFAIQADAPPMLAAWIPNMIFAIIALFCYKR 406 Query: 358 YTK 360 + Sbjct: 407 APR 409 >gi|319896844|ref|YP_004135039.1| inner membrane protein [Haemophilus influenzae F3031] gi|317432348|emb|CBY80703.1| conserved inner membrane protein [Haemophilus influenzae F3031] Length = 364 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 50/354 (14%), Positives = 123/354 (34%), Gaps = 15/354 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + +S + L ++ I + Q ++ + ++ +++ + G +PT+ Sbjct: 2 ILIRYLIKEVFKSQIAILLILLLIFFSQQFVRVLGAAANGNVPADLVFSLLGLGMPTMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P C + + +E+ ++ G + L+K L +++L + + + Sbjct: 62 LMLPLCLFIAILLTFGRLYAESEITVMRACGVGQRILVKVALLMSLLTASIATYNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + A+ T L F ++ + +N + +++ + Sbjct: 122 PWAIQKQANIVEDAKANPTMGVLSSGQFISTSNNNVVLFIDQIKDNQIHNVYLFQITPKK 181 Query: 183 --THKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G + Q + L + + + + D I F Y + Sbjct: 182 QIKPSVVTAEKGELIALPNGDQVLNLKNTQRVEGTSVLPDFRITHFDEYQAYLGHQETEN 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +A + L L+ + ++E H R+T L + LI++ + Sbjct: 242 NADEAAELTLVQLI----------QQDSPAAKAELHWRITLILAVPLMALIAVPLSRVNP 291 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + KI P + I F + F + + L F + I L Sbjct: 292 RQGRFAKILPALLLYLIYFLLQSSFKSAGGAGKLDTAIFMQLVNIGFLLLGIVL 345 >gi|171463871|ref|YP_001797984.1| permease YjgP/YjgQ family protein [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193409|gb|ACB44370.1| permease YjgP/YjgQ family protein [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 371 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 52/355 (14%), Positives = 128/355 (36%), Gaps = 15/355 (4%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 + R + + L +V I +++ + ++ + L + L ++ Sbjct: 7 LRRELSFTTGGVFLVLVTIMVTTLVIRILGYAANGAVNPEDTLVLIALATLGYLAVLLTV 66 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 + T VL +++E+++ +G S LI+P+L A L I + + + P Sbjct: 67 SLFVATLIVLVRWYKDSEMIVWLASGLSVTNLIRPILQFATPLIIVIALLALFVWPWANR 126 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 +S ++Q S + F + + + + I + Sbjct: 127 ESTLISQRSQQRDDVSVVSAGQFKESAKAERVFFIEELDVDKSKVKNIFVANSKNGRLSI 186 Query: 188 YAQSGSIDLD----RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 S + ++I+L++G + P D I++F Y+ + S ++ + Sbjct: 187 AVSSTGYIQNSEGGEKSIVLHNGRRYEGQPTQPDFRILEFNEYSTKIRSKDALAPAPRDR 246 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 ++ ++ LLN + P + R+E R+ L + LI+I A + + Sbjct: 247 EKTITELLN------DPNPTSVNPNRAELLWRIGLPLMALGLVLIAIPLAY---VNPRLG 297 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMIKK 356 +F ++ I + + + + ++ I + L + +L+ + Sbjct: 298 NYTAMFYAVLIYLIYSNLLNLTQNFVSQGRISVFVAIWPIHLLALLITTVLIRNR 352 >gi|330752041|emb|CBL80552.1| predicted permease YjgP/YjgQ [uncultured Flavobacteria bacterium] Length = 374 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 48/374 (12%), Positives = 115/374 (30%), Gaps = 21/374 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + YILR SF ++ + I+ IA V I ++I+ + I+ I Sbjct: 1 MQKLDWYILRKFMGSFFLTMILILAIAIVFDISEKIDDFQNGATMNEIVFDYYINFIAFY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + + T + + N+E++ + +GTS ++P A ++ + ++ Sbjct: 61 GNLFSALILFISTIWFTSRITSNSEVVAVLTSGTSFNRFLRPYFIGATIICLLSLTLNHL 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P K ++ ++ L + + Sbjct: 121 LVPHTNIKRIAFEEKYITGVSRPINQKVHRQVLPGHYVYFETYSGQRQSGYQFTYEVFDS 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIM-KFKSYTLQTESANSSTIV 239 + A +D L++ + ++ ++ + + TL S + + Sbjct: 181 HRLASKLSADFVRLDTATGQWRLDNFRLRTLDSLNNEVILTGRRMDTTLAFTSEQIAPKL 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 N + L E + +Y+ E +R + + +F L+++ A Sbjct: 241 SSIATMNSNELSRFIEQEEVTGNENIASYQMEMQRRTSYPVSSYVFVLLAVSLA---TQK 297 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI-----------------PILYLF 342 R+ I I L + + I +++ Sbjct: 298 RRGGLGINIAIGLILCAVYVFAMQISQTFAATGLLSIDKGLGSALLWVGIQPAEFAIWIP 357 Query: 343 LFCISSIFLLMIKK 356 + I + K Sbjct: 358 NLLFAGIAIWRFSK 371 >gi|285019431|ref|YP_003377142.1| permease [Xanthomonas albilineans GPE PC73] gi|283474649|emb|CBA17148.1| putative yjgp/yjgq family permease protein [Xanthomonas albilineans] Length = 368 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 47/362 (12%), Positives = 113/362 (31%), Gaps = 9/362 (2%) Query: 5 ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 +LY+ R + + L++ ++ + ++ + + + SL + Y +P + Sbjct: 9 DLYVGRAVLGTVLLTWAVLLGLDVIMALSNEFKDIGKGSYSLGHAVAYVAYTVPRRAYTL 68 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P + L + +EL + G SR L +L + + S + P Sbjct: 69 FPTGAVIGVLMGLGQLAATSELTALRALGLSRRRLSLAAAATMTVLIVAMVFSGETLGPW 128 Query: 125 CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD---- 180 ++ + A A+ S + + + D ++ + G ++ RD Sbjct: 129 AQNQADVIKANAKFNSNMSMARYSGLWAREGDTFLNAQAGEEHLQDGGGSWLELRDVRLY 188 Query: 181 ---TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + S + L G + S + + Q ++A ++ Sbjct: 189 SLDQNGRLATLTHASSAEHHANGWTLKQGYRDTFAERSVQRETFDSQPWPSQLDAAALAS 248 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + K + + L + + Y ++ R + + +I A Sbjct: 249 GLAKPRNLSAHDL-HVSIEYRQRNGLDARDYEDQYWSRWFYPINVLALCFAAIPFAFGAL 307 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 K + I ++ F + F Y L + ++ LM +K+ Sbjct: 308 RSGGMGKRLFLGILFALVFWLLQLFFG-RMAGALKFDYRIAYALPPLVMLTVSWLMFRKR 366 Query: 358 YT 359 + Sbjct: 367 SS 368 >gi|260912301|ref|ZP_05918852.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str. F0295] gi|260633602|gb|EEX51741.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str. F0295] Length = 402 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 47/361 (13%), Positives = 117/361 (32%), Gaps = 8/361 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 +K + YI+R +++ S L I+ IA V + + + + L I+ +P Sbjct: 42 LKILDWYIIRKFIGTYVFSILLIISIAIVFDVNENLAKFTQFHAPLKAIVFDYYANFVPY 101 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + +E++ + G S L++P + +L+S F Sbjct: 102 FANLFSPLFVFISVIFFTSKLAGTSEIISMLAAGVSFNRLMRPYMVSCLLISGLSFYLSG 161 Query: 120 IIEPK---CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + P + + + ++ + ++ + + + K Sbjct: 162 YVIPHGTVIKQNFESMYKNSKKNTSAENVQLQVDRGVIAYIQHYDDKAKRGYGFSLDKFE 221 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + Q +I + +++ + + + I+ K + E A+ Sbjct: 222 NKKLVSHMTASEIQYDTISDSKYHWQVSNWRIREMKALREKITYGDRKDTLIMMEPADLV 281 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + Y E+HKR+ I I + Sbjct: 282 FSKGQQETFTNPELSAYISKQIGRGSSNVVQYEVEYHKRIAASFASFILTTIGLSL---S 338 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + R+ + I L++SFG + + N P+L ++ + + Sbjct: 339 SRKRKGGMGLYLGIGLALSFG-YILLQTVSATFAVNADTPPMLAAWIPNLLFAVVAYFCY 397 Query: 357 K 357 + Sbjct: 398 R 398 >gi|254498611|ref|ZP_05111330.1| permease [Legionella drancourtii LLAP12] gi|254352151|gb|EET10967.1| permease [Legionella drancourtii LLAP12] Length = 359 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 51/369 (13%), Positives = 121/369 (32%), Gaps = 22/369 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + + + +V I Q++Q +N +S T I++K+ +PT+L Sbjct: 2 IIFRYLAREVFVTLIALTSILVLIFLSNQLIQYLNRAASGTIPGVIIMKLMMLELPTLLS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + + +E+ ++ G L++ +AI +++ + Sbjct: 62 LLVPLGFYIAMLVAYGRLYAESEMTVLRACGYGPNQLLQHSFIMAIGVALIVAAVMIWAS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +L + + F + + + + + + ++ ++ Sbjct: 122 PYIYIERAKLLRTTGIQTLVQTIMPGRFHAAHNGQEVFYVQSMSRDHSKAEHVFLAKRSK 181 Query: 183 THKIYY---------AQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 IIL DG+ ++ +P D I +F Y + Sbjct: 182 EKNKMRWDVLWADKAFAETDAKTGEDYIILQDGKEYQGTPGHADYQISEFGEYKARLPHP 241 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 I + + L N +P +E RL+ + + L+++ Sbjct: 242 IVK-INDDLRTFSTASLWPLNNADPGKA--------AELQWRLSVPIMVLTLTLVAVPL- 291 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-PYYIPILYLFLFCISSIFLL 352 + + K +F ++ I I L+ F + ++ L Sbjct: 292 --SRINSRSGKYAKLFPAIIIYILYANLMFIGRDAIVSGKIPQWLGLWWIHFLVVALGLF 349 Query: 353 MIKKKYTKI 361 +I + K+ Sbjct: 350 LIWRNQVKL 358 >gi|154492560|ref|ZP_02032186.1| hypothetical protein PARMER_02194 [Parabacteroides merdae ATCC 43184] gi|154087785|gb|EDN86830.1| hypothetical protein PARMER_02194 [Parabacteroides merdae ATCC 43184] Length = 361 Score = 99.3 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 52/362 (14%), Positives = 124/362 (34%), Gaps = 7/362 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 +K + YI++ +++ + I+ I+ V I ++I+ S L I+ IP Sbjct: 5 LKRIDWYIIKQFLGTYIFAIALIIAISVVFDINEKIDKFLSPDVPLKAIVFDYYMNFIPY 64 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + +G S L+ P A ++++ F+ Sbjct: 65 FANLFSPLFTFIAVIFFTSKLADNSEVIAMLASGMSFRRLMLPYAISAGIIALSTFVLNA 124 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 I P + + + ++ + +Y+ + + F ++ Sbjct: 125 YIIPPAN-ATRIDFQNKYIKNKKVDYVRSAQLEIEPGVIAYFDRYDARSGMGYRFSLEHF 183 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + + L D + + + I+ TL ++ V Sbjct: 184 EDKKMISRLTANSIKYDSLYNWTLIDYMIRDFDGMREHITEGSRMDTTLTIVPSDFLISV 243 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 S L ++T++ E+HKR + I I + Sbjct: 244 NDCETMTSSELSTYIDRQKKRGIGNIQTFQIEYHKRFAAIMAAFILTSIGASL---SSRK 300 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL-LMIKKKY 358 + I I L++SF + F+ + N P + ++ I F+ + + +K Sbjct: 301 IKGGMGLNIGIGLALSFS-YILFTTVTSTFAINGNLSPAMAAWIPNILYTFIAIYLYRKA 359 Query: 359 TK 360 + Sbjct: 360 PR 361 >gi|313887034|ref|ZP_07820734.1| permease, YjgP/YjgQ family [Porphyromonas asaccharolytica PR426713P-I] gi|312923560|gb|EFR34369.1| permease, YjgP/YjgQ family [Porphyromonas asaccharolytica PR426713P-I] Length = 361 Score = 99.3 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 48/359 (13%), Positives = 121/359 (33%), Gaps = 7/359 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK-ISGYLIPTV 60 + + YI ++ S + I+ +A + ++++ + L ++ +P Sbjct: 7 STVDRYIFTQFLATYFFSIVLILAVAIAFDVTEKLDKLLQPEVPLRAIIWDYYANFVPYY 66 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +P + V + + N+E++ I + G S L+KP + A +++I F+ + Sbjct: 67 ANLFSPLFVFIAVIYVTSRLAENSEIIAILSCGVSFRRLLKPYMLGAAVIAILTFLLSSF 126 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P I+ + + ++ + ++ +S YN + + F +D + Sbjct: 127 VIPPGN-RIRIDFQNRYIKDKRITYANAIQMQVAPETFMFMSYYNDESKVGYTFSMDRFE 185 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + K + + L D + + + + Sbjct: 186 GKDLKSRMMANSIVYDTLHNWQLQDYTITYFGERQDSLLRGNQLDTIIPITPKDFLVTEG 245 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 L + R + Y E HKR+ I L+ + A R Sbjct: 246 DVEMLTTPQLYR-SIQQQRMRGAATQLYAIELHKRIAMIPASFILTLMGVSL---SARKR 301 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYT 359 + + + LS+SF ++ F + P++ +L + + + + + Sbjct: 302 KGGMGLALAVGLSLSF-LYILFMTVTSSFAVTGAMSPMVAAWLPNLVYLGISFVLYRLA 359 >gi|197287277|ref|YP_002153149.1| permease [Proteus mirabilis HI4320] gi|194684764|emb|CAR46793.1| putative permease [Proteus mirabilis HI4320] Length = 365 Score = 99.3 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 51/364 (14%), Positives = 130/364 (35%), Gaps = 19/364 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R +S + ++ I + ++++ + N+++ + IP + Sbjct: 2 IIIRYLARETLKSQIAILFILMLIFFSQKLVEILGAAVEGNIPTNLVVSLLWLGIPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + + +E+ +++ G + L++ L L++L S+ + + Sbjct: 62 LILPLSLFLGLLMTYSKLYVESEITVMNACGIGKKALVQAALLLSLLTSVLAAGNVVWLI 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD-- 180 P +Q+ A+ + + L E F D + N Q +F+ R Sbjct: 122 PWSSVHQEQVLEDAKANPSLAALMEGQFKMSSDRNMVLYLGSVKGNQFQDVFLAQLRPTQ 181 Query: 181 TQTHKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 Q + A G + Q ++L++G + + + +D I F Y S+ Sbjct: 182 NQRPSVVVADKGYTKELPNGNQVVVLSEGTRYEGTAVLRDFRITDFTDYQAVIGHRESTI 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + ++ L + +EFH RLT VI L+ Sbjct: 242 SRNRVEQKTMNELWHSTEPES----------IAEFHWRLTLIFSVVIMALM---VVPLSE 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ ++ + ++ + F S + + P++ ++ L ++ Sbjct: 289 VNPRQGRVLSMLPAMLLYLVFFLLQSSLRSS-GEKGKVDPLIAMWTVNGIYFALALLLNA 347 Query: 358 YTKI 361 + + Sbjct: 348 WDTL 351 >gi|56552290|ref|YP_163129.1| permease YjgP/YjgQ family protein [Zymomonas mobilis subsp. mobilis ZM4] gi|56543864|gb|AAV90018.1| permease YjgP/YjgQ family protein [Zymomonas mobilis subsp. mobilis ZM4] Length = 364 Score = 99.3 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 42/358 (11%), Positives = 112/358 (31%), Gaps = 9/358 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQIL-QRINLVSSSTESLNILLKISGYLIPTV 60 + Y+ + ++FI + +L + +++ L P + Sbjct: 9 RQIAFYLSKLFVVRCFAVLAALIFILQTLDMLGESARILAVKGNGQAELFHYVLLRTPQL 68 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + PF + L+++N+N+E++ + G S ++ P++ L+ F+ + Sbjct: 69 IARFLPFAVLLGVLITLSTLNQNSEIISMKAAGISAHQILMPLIASCFLIGCVSFVFNDH 128 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQG---IFIVD 177 + + + + A + + D D I + I + + Sbjct: 129 LVTRATAKLDAWQAVDYGQPPPAATSGVNIWLRDGDHLIHVDNVQGYGDNVRLSGITVYN 188 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 I A +G + +V + ++ + Sbjct: 189 RSQKTLVSILSADTGQWTGHGW----HLNKVKSFDVAADTVTEKPVLDINTDLPPERFTL 244 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +KA++ + L + + ++ R T ++ ++ VA A Sbjct: 245 ADVKADEMEVVPLYRAIKA-LDAAGRPTDELKASLIHRFTGAFAAILMPILGSVAGFGLA 303 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + I +SL ++ V F+ + + P + F+ + ++I+ Sbjct: 304 RSGRLFVRIVIGMSLGFAYFVADNFALAMGNLGTYPPLLASCSPFILFLLIGEAVLIR 361 >gi|324005416|gb|EGB74635.1| hypothetical protein HMPREF9532_04926 [Escherichia coli MS 57-2] Length = 359 Score = 99.3 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 50/360 (13%), Positives = 127/360 (35%), Gaps = 3/360 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + Q+ + A + + N+ + + ++ + N G+ I RD Sbjct: 121 GASPLQQQALQIKSTATALGEDNDIIGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + IL+ + + + + ++ S N + + Sbjct: 181 DLSLESYIYARSATIEDDKTWILHGVNYKKWLNGKETLETLDNLAWQSAFTSMNLEELSM 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + Y ++L Q + + L+++ ++ R Sbjct: 241 PGNTFSVRQL-NHYIHYLQDTGQPSSEYHLALWEKLGQPILTLAMILLAVPFTF--SVPR 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + + + + + + +++ P+ L L + L + Y + Sbjct: 298 SPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYWYDR 357 >gi|260754017|ref|YP_003226910.1| permease YjgP/YjgQ family protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258553380|gb|ACV76326.1| permease YjgP/YjgQ family protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 364 Score = 99.3 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 42/358 (11%), Positives = 112/358 (31%), Gaps = 9/358 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQIL-QRINLVSSSTESLNILLKISGYLIPTV 60 + Y+ + ++FI + +L + +++ L P + Sbjct: 9 RQIAFYLSKLFVVRCFAVLAALIFILQTLDMLGESARILAVKGNGQAELFHYVLLRTPQL 68 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + PF + L+++N+N+E++ + G S ++ P++ L+ F+ + Sbjct: 69 IARFLPFAVLLGVLITLSTLNQNSEIISMKAAGISAHQILMPLIASCFLIGCVSFVFNDH 128 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQG---IFIVD 177 + + + + A + + D D I + I + + Sbjct: 129 LVTRATAKLDAWQAVDYGQPPPAATSGVNIWLRDGDHLIHVDNVQGYGDNVRLSGITVYN 188 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 I A +G + +V + ++ + Sbjct: 189 RSQKTLVSILSADTGQWTGHGW----HLNKVKSFDVAADTVTEKSVLDINTDLPPERFTL 244 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +KA++ + L + + ++ R T ++ ++ VA A Sbjct: 245 ADVKADEMEVVPLYRAIKA-LDAAGRPTDELKASLIHRFTGAFAAILMPILGSVAGFGLA 303 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + I +SL ++ V F+ + + P + F+ + ++I+ Sbjct: 304 RSGRLFVRIVIGMSLGFAYFVADNFALAMGNLGTYPPLLASCSPFILFLLIGEAVLIR 361 >gi|270157967|ref|ZP_06186624.1| putative permease [Legionella longbeachae D-4968] gi|289163766|ref|YP_003453904.1| Predicted membrane protein [Legionella longbeachae NSW150] gi|269989992|gb|EEZ96246.1| putative permease [Legionella longbeachae D-4968] gi|288856939|emb|CBJ10753.1| Predicted membrane protein [Legionella longbeachae NSW150] Length = 359 Score = 99.3 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 51/370 (13%), Positives = 119/370 (32%), Gaps = 24/370 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + + + +V I Q++Q +N +S + I++K+ +PT+L Sbjct: 2 IIFRYLAKEVLITLISLTSILVLIFLSNQLIQYLNRAASGSIPGVIIMKLMMLELPTLLC 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + + +E+ ++ G L+K L +A ++ + I Sbjct: 62 LLIPLGFYIAMLLAYGRLYAESEMTVLRACGYGPNKLLKHSLIMATVVGFIVAIVMIWGS 121 Query: 123 P--KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P S Q + +++ S + + +F+ Sbjct: 122 PLIYIERAKLLRSTGIQTLVQTIMPGRFHAINEGKEVFYVQSMSRDHTKAEQVFLAKRTT 181 Query: 181 TQTHKIYYAQSGSI-------DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 + IIL +G+ ++ P D I +F Y + Sbjct: 182 VDDKTRWDVLWADQAFAETDPKTGEDYIILQNGKEYQGVPGHADYQIAEFGEYKARLPHP 241 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 I + + L N + +E R + + LI++ Sbjct: 242 VVK-ISEDFRTISTANLFPFNNTDRAKA--------AELQWRFSVPIMVFALTLIAVPL- 291 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFL 351 + + K + ++ I + + P ++ + ++ L CI + L Sbjct: 292 --SRINPRSGKFAKLLPAIIIYIVYANLLFIARDAMVSGKMPQWLGLWWVHL-CIIAFGL 348 Query: 352 LMIKKKYTKI 361 +I + K+ Sbjct: 349 WLIWRNQAKL 358 >gi|326388616|ref|ZP_08210209.1| permease YjgP/YjgQ [Novosphingobium nitrogenifigens DSM 19370] gi|326206867|gb|EGD57691.1| permease YjgP/YjgQ [Novosphingobium nitrogenifigens DSM 19370] Length = 420 Score = 99.3 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 55/362 (15%), Positives = 134/362 (37%), Gaps = 12/362 (3%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI R + L + + + ++L+ + V++ + I+ K+ L+P + Sbjct: 7 IDKYIARLVFVPMLSVFVIAASLLVLDKMLKLFDFVATQGGPVGIVFKMLANLMPEYASL 66 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + + ++EL ++ G S L++ LA +L+ + + ++P Sbjct: 67 AIPLGLMLGILLAFRKLATSSELDVMRAVGLSYTRLLRVPYILAFVLAALNLLIVSYVQP 126 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS-KYNPNNTLQGIFIVDSRDTQ 182 R ++L + + + ++ F L D +++ + LQGIF Sbjct: 127 LSRYYYEELQFELRSGALGASIKVGEFNSLQDRTALRVESSRDDGRQLQGIFARVVGKDG 186 Query: 183 THKIYYAQSGSIDLDRQAI-----ILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G +R+ L DG++ ++SP ++ ++ F S+ L + Sbjct: 187 QILVISAREGQFFANRENPDTVILRLTDGQIVQESPTIRNPRVLTFASHDLPIDLPKIEQ 246 Query: 238 ---IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + + L LL+ + + P++ + H RL + + ++++ A Sbjct: 247 FRRRGDQDREYFLPELLHIGWSQDS-TPQMRYQSLASLHFRLVEVAMMFLLPMLAMALAV 305 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + I + V + +P L+ F +++ + M Sbjct: 306 PPKRSSSSLGVFVSIILVVAYHKVNEYGQDVSSLGRIDPTIA--LWGPFFIFAALIMWMY 363 Query: 355 KK 356 + Sbjct: 364 WR 365 >gi|71083418|ref|YP_266137.1| permease YjgP/YjgQ family protein [Candidatus Pelagibacter ubique HTCC1062] gi|71062531|gb|AAZ21534.1| Predicted permease YjgP/YjgQ family protein [Candidatus Pelagibacter ubique HTCC1062] Length = 378 Score = 99.3 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 66/376 (17%), Positives = 128/376 (34%), Gaps = 16/376 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + + FL+ I I WV+Q + ++ V + K + P ++ Sbjct: 3 KIVYKKLSKDCVNFFLLVVFTISIIIWVLQAVNYLDFVIEDGHGFLVYFKYTLLSFPKII 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF + + +L EL+I N G +I I + ++ + + +I Sbjct: 63 SRIFPFAIFLAFSYILLKYENKNELVIFWNFGIKKINFINFFIKFSLWFVLISLLLNAVI 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + + L S L+ F + +L I + N L IF+ + D Sbjct: 123 TPFAQDKARSFIRSSNLDFFESVLKPKKFIDIIGNLTIYFDEKNKKGELINIFLNEKTDI 182 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI-VL 240 + +A++ +++D IL + + I+ IS +F NS+TI Sbjct: 183 NNSQTTFAKTAIVNIDNNKKILTLYDGKSINVINGKISEFEFSKTDYNISKFNSNTITYQ 242 Query: 241 KANDQNLSFLLNP---------------NPNNPNYRPELLETYRSEFHKRLTQWLFPVIF 285 K + L+ N N R + L+ E + RL + L+ Sbjct: 243 KTQEAKTINLIKCSLFFNGSIINSTNIEIENIKNCRLDNLKNVYKELYSRLVKPLYITFL 302 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC 345 IS++ K + F +F S + ++ + Sbjct: 303 ISISLLFILKSKSDHSFNINKFKIYLFAFLFIIFLESSSKLISTNLMQNIFLSIFPLILT 362 Query: 346 ISSIFLLMIKKKYTKI 361 + +IK K K+ Sbjct: 363 LIIYLYFVIKLKINKV 378 >gi|258593792|emb|CBE70133.1| putative Inner membrane protein yjgQ [NC10 bacterium 'Dutch sediment'] Length = 362 Score = 98.9 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 42/356 (11%), Positives = 105/356 (29%), Gaps = 4/356 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + +I + R + + ++ + ++ ++ ++ V T +L IP+ + Sbjct: 9 STIDRHIWFRVIRGYALVMAVLLSVFSLMALVNELDSVGRGTYTLGDAFLNVILTIPSRM 68 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + + L + + EL+ + GTS + + V ILL I + + I Sbjct: 69 IELAPTTAVLGSIIGLGELASSHELIAMQTLGTSPLRIGASVTVTGILLMIAVIGVQEWI 128 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P +A + + + R + Sbjct: 129 APSADQLAYMRRIQAISKPEALHTRQGFWSRDGRQFIRVYQVLPGRILSNVEIYEFDDNH 188 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + + +A +L D + S+ + +VL Sbjct: 189 RLRLVTWAARAE-PEGSHRWVLIDVVQRMVDGGGVASKQLASLSWAGSLTPTQAELLVLP 247 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 A + S L + + + +++T L ++ L++I Sbjct: 248 AEILSRSTL-SQYIAFLKKTGQDVARLEIRLWQQMTMPLSTLMMVLVAIPFVLGPLRKAT 306 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 K + +F + G +I H + L + + + ++ Sbjct: 307 AGKRILHGSLIGAAFHL--GSHFIAHLGAILHLNAALTVLSPLAVLGGVTVWVYRR 360 >gi|325983221|ref|YP_004295623.1| permease YjgP/YjgQ family protein [Nitrosomonas sp. AL212] gi|325532740|gb|ADZ27461.1| permease YjgP/YjgQ family protein [Nitrosomonas sp. AL212] Length = 352 Score = 98.9 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 48/349 (13%), Positives = 113/349 (32%), Gaps = 2/349 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 YI + FL++ I+ + +L +++ V T + + L+P Sbjct: 2 IYRYISGQVLIGFLIAIAVILPLFSFFDLLDQLDDVGRGTYHITDAFLYTTMLLPRRFIQ 61 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 + PF + T L + ++EL+ + G S + L + ILL + + I E I P Sbjct: 62 IAPFVALLGTVTALGKLAVHSELIAMRVAGLSPWRISLAPLSVGILLLLGVAILEQFIAP 121 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A A ++ R + ++ + N + + Sbjct: 122 QLQQKAITYRAIALEQSAELGRNLGIWTRNEKNILRIGQIISNNKAAAIEILQLDEEGFL 181 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 AQ+ I + L++ V + ++ ++ + +T+ Sbjct: 182 AAHVLAQTAEIVDNETWE-LSNVIVRTFANNQITVAHHTTLHWSSFVSPEDIATLTKPPE 240 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 + L + + ++Y +++ L + L+SI Sbjct: 241 SLSPLELFR-HVEFLRSTGQEADSYALALWRKIGSALMTIAMLLLSIPFVFGSIRSGLSN 299 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 K+ + + + + ++ NP I + F + + L Sbjct: 300 KLVFASLIGIAVYLLDQIIANAGLILQLNPALIALAPGFTIIMVANVWL 348 >gi|117625285|ref|YP_854457.1| putative permease [Escherichia coli APEC O1] gi|115514409|gb|ABJ02484.1| putative permease [Escherichia coli APEC O1] gi|294491111|gb|ADE89867.1| putative permease, YjgP/YjgQ family [Escherichia coli IHE3034] gi|307625417|gb|ADN69721.1| hypothetical protein UM146_01460 [Escherichia coli UM146] gi|315288788|gb|EFU48186.1| conserved hypothetical protein [Escherichia coli MS 110-3] gi|323951498|gb|EGB47373.1| YjgP/YjgQ permease [Escherichia coli H252] gi|323957870|gb|EGB53584.1| YjgP/YjgQ permease [Escherichia coli H263] Length = 359 Score = 98.9 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 50/360 (13%), Positives = 128/360 (35%), Gaps = 3/360 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDNDIIGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + IL+ + + + + ++ S N + + Sbjct: 181 DLSLESYIYARSATIEDDKTWILHGVNYKKWLNGKETLETLDNLAWQSAFTSMNLEELSM 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + Y ++L Q + + L+++ ++ R Sbjct: 241 PGNTFSVRQL-NHYIHYLQDTGQPSSEYHLALWEKLGQPILTLAMILLAVPFTF--SVPR 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + + + + + + +++ P+ L L + L + Y + Sbjct: 298 SPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYWYDR 357 >gi|300900316|ref|ZP_07118495.1| conserved hypothetical protein [Escherichia coli MS 198-1] gi|300356206|gb|EFJ72076.1| conserved hypothetical protein [Escherichia coli MS 198-1] Length = 315 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 45/315 (14%), Positives = 111/315 (35%), Gaps = 1/315 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + IL+ + + + + ++ S N + + Sbjct: 181 DLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLETLDNLAWQSAFTSMNLEELSM 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + YR ++L Q + + L+++ Sbjct: 241 PGNTFSVRQL-NHYIHYLQETGQPSSEYRLALWEKLGQPILTLAMILLAVPFTFSAPRSP 299 Query: 301 QRKKIHPIFISLSIS 315 + + + + Sbjct: 300 GMGSRLAVGVIVGLL 314 >gi|124514757|gb|EAY56269.1| putative permease, YjgP/YjgQ family [Leptospirillum rubarum] Length = 362 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 62/365 (16%), Positives = 122/365 (33%), Gaps = 13/365 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ YI + + FL+ + + I VI +++I S +L ++ + Y V Sbjct: 1 MRILTRYIASELFKIFLLCFISLEAIYGVIDSVEKIKDFLSHHAALPLIGQYFFYRSIEV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 V P + T L +++N EL I G S + KP L L +L+S+ Sbjct: 61 SFRVLPMSGLLATLLTLGILSKNHELTAIRAAGISLVKATKPFLALGVLISLISIAMNYQ 120 Query: 121 IEPKCRS---TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD 177 + P IK + + ++ N++FR + ++ Sbjct: 121 LVPYAYQMTDYIKDVRIDQGKSGNVTFELNNVWFRHGNQDIYGARTIRDGGNELDKVVLY 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 D H + + ++ + DG + R P + I F+ Sbjct: 181 HLDRTFHLSWQVDAKTLRYHQGLWSFQDGHLTRFLPDGS-LKIESFQKMDTTLTRRPVDF 239 Query: 238 IVLKANDQNLSF-LLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 K +LS+ L+ E Y + + + L++I Sbjct: 240 TYEKTRMTHLSYPELDRYIALLEKSHLPREKYEVTRDAMIAFPIAAFLMVLMAIPFGI-- 297 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF-----LFCISSIFL 351 RQ ISL +S +W + + + +P + + +F +S Sbjct: 298 REGRQVGIAKGFGISLLLSMS-YWTIYSLGLALGKGGVLLPWISAWFANMIVFFVSISLF 356 Query: 352 LMIKK 356 L++ + Sbjct: 357 LLLNR 361 >gi|296445732|ref|ZP_06887685.1| permease YjgP/YjgQ family protein [Methylosinus trichosporium OB3b] gi|296256712|gb|EFH03786.1| permease YjgP/YjgQ family protein [Methylosinus trichosporium OB3b] Length = 361 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 36/350 (10%), Positives = 99/350 (28%), Gaps = 5/350 (1%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTE-SLNILLKISGYLIPTVL 61 + Y+ ++ L + + +V+ ++ + + + + ++ +P Sbjct: 5 TLSRYLAARFAKTILAIFATMFCLMFVVYFVELLRRAGDIPQAGADTVALMTILRVPATA 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF + R EL++ +G S + P F+A+++ + N + Sbjct: 65 ETILPFAVLFGAMTTFVDLTRKLELVVARASGVSVWQFLFPPAFVALVIGVVSVTLYNPV 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 + Q+ + ++ + + RL I S + Sbjct: 125 SAVMKQRSDQMELELFGVQGSVRVDHSKWLRLTGVDGTAILHATDYQAGGARLTEVSVNV 184 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + + + + R + E R + ++ + T Sbjct: 185 YSKEGLFLERVEAARARLLAGVFVLEEARVNAPGEESRTVGSYLLATDLTPEQLVTATTP 244 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 LL + Y +F L + L V L++ + R Sbjct: 245 PQGAPFWSLLELGEKTADA-GLDPTGYILQFQTLLARPLLLVAMVLVAASFSL--RFFRM 301 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + + F ++ + + + P++ + + L Sbjct: 302 GGIARTVSGGVVAGFVLYIV-TKLFSDLGGAGVISPLVAAWSPALVGSML 350 >gi|294670274|ref|ZP_06735167.1| permease, YjgP/YjgQ family [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308011|gb|EFE49254.1| permease, YjgP/YjgQ family [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 348 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 34/311 (10%), Positives = 102/311 (32%), Gaps = 5/311 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+++ + + L + ++ + I+ + V + +++ IP Sbjct: 1 MTLIARYLIKQLSITTLYAMFALLALYSFFDIVAEVGGVGEGGYTGIKMMQYVLLQIPDH 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + N+E+ +I +G S +I +L ++ + + Sbjct: 61 AYQMMPLAVLIGGLIALSQLASNSEMTVIKTSGMSTKNIIAILLGFGLIFAAATALLGES 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + L A+ + + + + I + + P+ +L+GI + Sbjct: 121 VAPAANRYAQNLKTTAKNGKIST--GAEGLWIKEQNNIINVREMLPDQSLRGIKVFRHDQ 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + ++ L + + + + +++ Sbjct: 179 NFKLAESWQAESAVIAADGGWKLANVRRSILDGDRVRTEKHDGEYWQAGIRGSLLDVLLV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N +L+ L + + + Y+ E+ ++L + V+ L+++ R Sbjct: 239 NPNQMSLTALT-AYIKHLEDNKQQADNYKIEWWRKLMYPVATVVMALVALAF--TPQSTR 295 Query: 301 QRKKIHPIFIS 311 + + Sbjct: 296 HGNMGLKLLPA 306 >gi|218261075|ref|ZP_03476041.1| hypothetical protein PRABACTJOHN_01705 [Parabacteroides johnsonii DSM 18315] gi|218224239|gb|EEC96889.1| hypothetical protein PRABACTJOHN_01705 [Parabacteroides johnsonii DSM 18315] Length = 361 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 54/362 (14%), Positives = 124/362 (34%), Gaps = 7/362 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 +K + YI++ +++ + I+ I+ V I ++I+ S L I+ IP Sbjct: 5 LKRIDWYIIKQFLGTYIFAIALIIAISVVFDINEKIDKFLSPDVPLKAIVFDYYMNFIPY 64 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + +G S L+ P A ++++ F Sbjct: 65 FANLFSPLFTFIAVIFFTSKLADNSEVIAMLASGMSFRRLMLPYAISAGIIALSTFALNA 124 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 I P +T K Y+ ++ + +Y+ + + F ++ Sbjct: 125 YIIPPANATRIDFQNKYIKNKKVDYVRS-AQLEIEPGVIAYFDRYDARSGMGYRFSLEHF 183 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + + L D + + + I+ TL ++ V Sbjct: 184 EDKKMISRLTANSIKYDSLYNWTLIDYMIRDFDGMREHITEGSRLDTTLTIVPSDFLISV 243 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L ++T++ E+HKR + I I + Sbjct: 244 NDCETMTSPELSTYIDRQKKRGIGNIQTFQIEYHKRFAAIMAAFILTSIGASL---SSRK 300 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL-LMIKKKY 358 + I I L++SF + F+ + N P + ++ I F+ + + +K Sbjct: 301 IKGGMGLNIGIGLALSFS-YILFTTVTSTFAINGNLSPAMAAWIPNILYTFIAIYLYRKA 359 Query: 359 TK 360 + Sbjct: 360 PR 361 >gi|145300687|ref|YP_001143528.1| permease [Aeromonas salmonicida subsp. salmonicida A449] gi|142853459|gb|ABO91780.1| predicted permease [Aeromonas salmonicida subsp. salmonicida A449] Length = 370 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 48/350 (13%), Positives = 114/350 (32%), Gaps = 20/350 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R ++ L ++ I Q ++ I + ++ + + + Sbjct: 4 IVFRYLFRETLKTQLAVLFVLLLIFVSQQFIKIIGDAADGEVPTRLVSTLLLLNLSNMAL 63 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ G S +++ + LA+L + + I Sbjct: 64 LMLPISLFLAILFAHGRLYAESEMTVLHAVGFSHRFVMRCAMVLALLTAAVAAFNTGWIA 123 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV---DSR 179 P+ + Q+ + + S+L+ F LD + + + I S Sbjct: 124 PQAKEREYQVIDEFKADPGISFLQAGRFMELDKGRLVAYIQELNDKASLLQKIFVLQRSH 183 Query: 180 DTQTHKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 D + + A G + LD Q + L DG + ++ I +F Y+L Sbjct: 184 DGKPPSVVVATEGVVTLDSNGLQWLTLKDGSRYEGHFSTRQFQISEFDEYSLVIRQQEME 243 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 KA + LL +E R++ L ++ + Sbjct: 244 RSNRKAAARPTVDLL----------GTQDNGMMAELQWRISLPLSILVLTFL---VVPLA 290 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-PYYIPILYLFLFC 345 + ++ + + ++ + F S I+ + P ++L Sbjct: 291 RVNPRQGRYAKLLPAILLYLSYFLLLSAARSAIDSGRLPHWPGMFLVPLV 340 >gi|311103830|ref|YP_003976683.1| hypothetical protein AXYL_00610 [Achromobacter xylosoxidans A8] gi|310758519|gb|ADP13968.1| hypothetical protein AXYL_00610 [Achromobacter xylosoxidans A8] Length = 392 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 48/370 (12%), Positives = 115/370 (31%), Gaps = 23/370 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M++ Y+ R I RS + + ++ + ++ ++ V S+ LL + IPT Sbjct: 1 MRTARRYLAREIYRSCAVVLMALLGLFTFFALVDDLDNVGDK-FSMMALLYMQALAIPTR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L + + EL+I+ +G S + L++ + + I L I + Sbjct: 60 LYDLLPIGLLIGAILALAGLAQRNELVILRVSGVSGMKLLRMLWIVTIPLMIGAGLLSEY 119 Query: 121 IEPKCRSTIKQLSAKAQL----ALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + P + + + S I I + + + + + Sbjct: 120 VTPWAEIKSGEANLLFRGKAGGDRLNSGYWFKEPTADGGTRIINIGELKGDGQVSAVTLY 179 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD--------------ISIMK 222 + + QT + ++L D R + + + + Sbjct: 180 EFKKDQTLSALSTAPTGLFTQGD-LLLKDVTETRLDDEAAEALANARPPKHPPATVVKLP 238 Query: 223 FKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFP 282 ++ + VL +++ LL+ + ++L Sbjct: 239 ERNIDTTLSAERLLARVLTPERMSIATLLD-YVDYLRNNQLQYGRQVVALWRKLAYPFTL 297 Query: 283 VIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 ++ I+ R+ +FI + + G F ++ + + L Sbjct: 298 LVMITIAAPIGLM--QTRRGGVGAKVFIGILLGVGFFMLNQLALNVGMLGKWPAWLTALG 355 Query: 343 LFCISSIFLL 352 + I L Sbjct: 356 PNIGAMIVAL 365 >gi|325527102|gb|EGD04517.1| YjgP/YjgQ like transporter [Burkholderia sp. TJI49] Length = 363 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 54/361 (14%), Positives = 119/361 (32%), Gaps = 15/361 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ I +++ + +S +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTIMLTTMMIRIVGYAASGEIDPRDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT R++E+++ +G S LIKP+ A + + + + Sbjct: 62 VMLVVTLFVSILFVLTRWYRDSEMVVWLASGVSLTRLIKPIGVFATPIILLIAFFAFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P K + A+ Q S L F + + + + + + + Sbjct: 122 PWSNQQSKMIKARFQQRDEISLLAPGQFRESATNHRVFFIEKMTPDQSKVQNVFVTSTEN 181 Query: 183 THKIYYAQ---SGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + ++L +G + +P + IM+F+ Y ++ S + Sbjct: 182 GKVNVVVSQTGHTETRDGDRFVVLENGRRYDGTPGQPNFKIMEFQRYGVKITSTPVVNVP 241 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD-KRAL 298 + L L NP +N +EF R L + ++ I A Sbjct: 242 TTNSTPTLDLLRNPTRDNL-----------AEFAWRAGLPLIAINLMVLGIPLAYQNPRR 290 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 R + + I L+ S + + I + L+L + I + + Sbjct: 291 SRTINLVMAVLIYLTYSNLLNVVQAQIEQGKMSFGVGLLGLHLIVAAIVGFIFWLRVRNR 350 Query: 359 T 359 Sbjct: 351 P 351 >gi|120434961|ref|YP_860647.1| hypothetical protein GFO_0597 [Gramella forsetii KT0803] gi|117577111|emb|CAL65580.1| conserved hypothetical protein, membrane [Gramella forsetii KT0803] Length = 341 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 43/344 (12%), Positives = 114/344 (33%), Gaps = 7/344 (2%) Query: 18 MSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVL 77 M + + I + + ++I+ + + + ++ P + Sbjct: 1 MMLVLFIPIGITVNLAEKIDKILENEVPFIEVAYYYLDFTIYFANLLFPIFLFLSVIWFT 60 Query: 78 TSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQ 137 + + NTE++ ++G S ++P L A ++ I + + P+ + + Sbjct: 61 SKLAMNTEIVAFLSSGVSFYRFLRPYLIGATIVCISALVLAMYLAPQASKGFNEFKYQYL 120 Query: 138 LALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF-IVDSRDTQTHKIYYAQSGSIDL 196 + +++ +++D+ YI S + P + F + + A + Sbjct: 121 KRGEQTQETSDVYRQINDNEYIYASHFQPKSKSARNFTLEHFEGNELKFKISASNLRYSE 180 Query: 197 DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPN 256 + L+ + I M+ L E + A N + L Sbjct: 181 EDSLYKLSRVDKRIIGKEEDSIMFMRSLDTILPFEFDELTPESYIAETLNYTELNEFIEK 240 Query: 257 NPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISF 316 + Y +KR + + I +I++ A + R+ + + ++++F Sbjct: 241 ERRRGSGNINRYLVVAYKRWSIPISAFILTIIAVAVA---SFKRRGGMGVNLAVGITLAF 297 Query: 317 GVFW---GFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + F + + +P +F + ++ LL K+ Sbjct: 298 IFIFFDKVFGTMAEQSTFSPLIAVWFPNIVFGVLAVVLLFRAKR 341 >gi|254453977|ref|ZP_05067414.1| permease, YjgP/YjgQ family [Octadecabacter antarcticus 238] gi|198268383|gb|EDY92653.1| permease, YjgP/YjgQ family [Octadecabacter antarcticus 238] Length = 362 Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 38/337 (11%), Positives = 97/337 (28%), Gaps = 12/337 (3%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 Y R +F + + +I +++++ SL + ++S +PT + Sbjct: 1 MHRYFARRFAWTFAATFGGFFVLMLLIDLVEQLRR-YGGDASLGDMFQLSLLNLPTGIYA 59 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 + P + T + R++EL++ G S + + L + +++ N + Sbjct: 60 ILPLIMVLATVTTFLGLARSSELIVTRAAGRSALNALIAPLIVTLIIGAIAIGVLNPLVA 119 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFR-----LDDDLYIKISKYNPNNTLQGIFIVDS 178 + + + I+ + N + T + Sbjct: 120 ATLKEYEARENALRSDGPSVLAISENGLWLRQGDDNSQTVIRAGRANLDGTQLQDVTFIT 179 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI---SKDISIMKFKSYTLQTESANS 235 ++ S +L + A L++ + + + + Sbjct: 180 FPPTGGPTRRIEAASANLTQGAWELSEAKAWPLNSGRVAESVATTHTTLRIPSTLTADQI 239 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + + L + ++ F L Q F + LI A Sbjct: 240 RDSFGVPSSIPIWEL-PAFIDRLEVAGFSAARHQVWFQMELAQPAFLLAMVLIG--AGFT 296 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN 332 R + + ++ I F +F+ ++ E Sbjct: 297 MRHQRGGRTGVMVLTAILICFALFFLRNFAQILGENG 333 >gi|315634608|ref|ZP_07889892.1| inner membrane protein YjgP [Aggregatibacter segnis ATCC 33393] gi|315476556|gb|EFU67304.1| inner membrane protein YjgP [Aggregatibacter segnis ATCC 33393] Length = 364 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 125/357 (35%), Gaps = 19/357 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + +S + ++ I + Q+++ + ++ +++ + G +PT+ Sbjct: 2 ILTRYLTKEVFKSQIAILFILLLIFFCQQLVRVLGSAANGQVPADLVFSLLGLGMPTMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P C + L + +E+ ++ G L+K VL L++ + + Sbjct: 62 LMLPLCLFIAILLTLGRLYAESEITVMRACGVGSKILVKVVLILSLFTGALAAYNALWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + + +A+ L F ++ ++ N + +++ ++ Sbjct: 122 PWAINKQVAIIEEAKANPNMGALSAGQFMTANNSDFVLFIDDIQENQINNVYVFQTQPKG 181 Query: 183 --THKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G + Q + L + + + I D I F Y Sbjct: 182 QTKPSVIVAEQGELKSLPNGDQILRLQNSDRFEGTAILPDFRITHFDEYQAYLGHKAVED 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +A + +L LLN + ++EFH RLT L I L+++ Sbjct: 242 DSNEAGEMSLMQLLNAD----------TPAMKTEFHWRLTLILAVPIMALLAVPL---SR 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-PYYIPILYLFLFCISSIFLLM 353 + ++ + + +L + F S + + L + +L+ Sbjct: 289 VNPRQGRFAKVLPALLLYLIYFLLQSSLKSAGGAGKLDASLFMPLVNGGFFLLAILL 345 >gi|260494012|ref|ZP_05814143.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33] gi|260198158|gb|EEW95674.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33] Length = 363 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 51/362 (14%), Positives = 114/362 (31%), Gaps = 11/362 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K ++Y+ + + FLM+ + + + + Q + I ++ +L L+P + Sbjct: 3 KKMDIYVSKYFIKFFLMNIIGFMGVFLLAQTFKIIKYINQGKLVGGEILDYILNLLPKMF 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + ++ M N E++ + +G + +++ L +A ++S+ +F N I Sbjct: 63 VETAPLSVLLAGLITISIMASNLEIVSLKTSGIRFLRIVRAPLIIAFVISLIVFFINNSI 122 Query: 122 EPKCRSTIKQLSA-----KAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 K + I +L T L +I++ + Sbjct: 123 YTKSLAKINFYRRGEVDESLKLPTTKENAFFINNTDGYLYLMGEINRETGVAENIEVVKF 182 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 D+ ++ +I A+S D + I ++ ++ S Sbjct: 183 DTEISKPKEIITAKSAKFDTEENKWIFSNVNIYNVDTKETITKTEYKSKLYKDDPSNFIR 242 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L E Y SE KR + I I + Sbjct: 243 ASAEDPRMLTIKEL-KKTIKEQKSIGEDTRIYLSELAKRYSFPFASFIVAFIGLSV--SS 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMI 354 VR + + I + +G + S + N P + ++ I + + Sbjct: 300 KYVRGGRTTMNLVICVIAGYGYYLV-SGAFEAMSLNGILNPFIASWIPNILYLIIGIYFM 358 Query: 355 KK 356 + Sbjct: 359 NR 360 >gi|162148704|ref|YP_001603165.1| permease [Gluconacetobacter diazotrophicus PAl 5] gi|161787281|emb|CAP56875.1| putative permease [Gluconacetobacter diazotrophicus PAl 5] Length = 402 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 52/362 (14%), Positives = 127/362 (35%), Gaps = 11/362 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + + Y++ + FL+S ++ + ++L +N+++S +L I + L+P L Sbjct: 18 TLDRYLIGQMLPPFLLSLGVVMTALLLERLLTLLNVLASDGGTLKIFAGLLADLVPHYLG 77 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + +V+ M++N E+ + +G S + + +P + + +L + F I+ Sbjct: 78 LALPAAICVSVFSVVRRMSQNNEIDALMASGVSLLRIARPFVVMGAVLGLVGFSLYGFIQ 137 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P R +Q A A +L+ +F D L + + T + + Sbjct: 138 PYARYDFRQALYIASHAGWTPHLQARMFAAPSDTLMLTADQVQGAGTRLRRVFIRDKSAG 197 Query: 183 THKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS---- 236 + A SG + D + L+ + + D + T + +S Sbjct: 198 LERDITADSGRLLMTDDGTTVRLDLAHGVIVTDRNDDRPTLTTFDTTTRFFQTSSKAHAF 257 Query: 237 -TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + + L + + +E H RL + + +++ A Sbjct: 258 RNRGNDERELTVLELRHGIRHRDLAIRRTH--LVAELHFRLARAMAIPFIPILACALA-- 313 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 RQR ++S+ + ++ +++ + +I Sbjct: 314 GMAKRQRHNTGLAIAAISLVGFDHALQLGLSLVASRSMSPWLVIWGPFAVFGFACVWLIL 373 Query: 356 KK 357 ++ Sbjct: 374 RR 375 >gi|15893268|ref|NP_360982.1| hypothetical protein RC1345 [Rickettsia conorii str. Malish 7] gi|15620488|gb|AAL03883.1| unknown [Rickettsia conorii str. Malish 7] Length = 378 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 63/363 (17%), Positives = 156/363 (42%), Gaps = 11/363 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y ++ I ++ + I W+ QIL+ + L + + ++PT+ Sbjct: 19 MLLYRKYFIKNILPLLIVVTFSVTSIVWITQILKLLYLF-DKGIKVMDFFSLIVLVLPTL 77 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + + ++ +L+I+ +G + + L P L++A+++ + + + Sbjct: 78 LFILLPVIMVITVIYIYNNLKVERQLIILQASGVNNVQLALPALYVALIVMLLAYYISSN 137 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P +K + S +EE F ++ D+ + I K + N + G+ I D+R+ Sbjct: 138 ILPLSHINLKSRLNFIKNNYISSMIEEKTFNKVTKDITVFIDKKSAGNIMNGVIIFDNRN 197 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI-SKDISIMKFKSYTLQTESANS---- 235 + +A SG++++ + I + R+ + +++ + F S ++ ++ N Sbjct: 198 ADNPSVVFAGSGTLNIYDNSPIFELNKGIRQEYDVNGNLTQLTFDSLMIKLQNDNPLVSQ 257 Query: 236 -STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + +AN+ +S LL P + + +E H+R+ L+ + +++ Sbjct: 258 RTKHNKEANEYYISELLAPPHDLAITKKI---KLIAEAHQRIIWPLYNFVLPFVALAVFL 314 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + ++ + +F +L++ F + + +N +I Y L +I L + Sbjct: 315 RYPYSKKTTFMPVLFSALTVLLVTSIHF-ILQNFASKNLDFIFACYFNLVIALTIGLYLF 373 Query: 355 KKK 357 +K Sbjct: 374 VRK 376 >gi|78067267|ref|YP_370036.1| YjgP/YjgQ like transporter [Burkholderia sp. 383] gi|77968012|gb|ABB09392.1| YjgP/YjgQ like transporter [Burkholderia sp. 383] Length = 363 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 54/361 (14%), Positives = 120/361 (33%), Gaps = 15/361 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ I +++ + +S +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTIMLTTMMIRIVGYAASGEIDPRDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT R++E+++ +G S LIKP+ A + + + + Sbjct: 62 VMLVVTLFVSILFVLTRWYRDSEMVVWLASGVSLTRLIKPIGVFATPIILLIAFFAFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P K + A+ Q S L F + + + + + + + Sbjct: 122 PWSNQQSKMIKARFQQRDEISLLAPGQFRESATNHRVFFIEKMTPDQSKVQNVFVTSTEN 181 Query: 183 THKIYYAQ---SGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + ++L DG + +P + IM+F+ Y ++ S + + Sbjct: 182 GKVNVVVSQTGHTETRDGSRFVVLEDGRRYDGTPGQPNFKIMEFERYGVKITSTPVTNVP 241 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD-KRAL 298 + L NP +N +EF R L + ++ I + Sbjct: 242 TTNSTPTPDLLRNPTNDNL-----------AEFAWRAGLPLIAINLMVLGIPLSYQNPRR 290 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 R + + I L+ S + S I + L+L + I + + + Sbjct: 291 SRTINLVMAVLIYLTYSNLLNVVQSQIEQGKMSFGVGLVGLHLVVAVIVAFIFWLRVRNR 350 Query: 359 T 359 Sbjct: 351 P 351 >gi|264678997|ref|YP_003278904.1| permease YjgP/YjgQ [Comamonas testosteroni CNB-2] gi|262209510|gb|ACY33608.1| permease YjgP/YjgQ [Comamonas testosteroni CNB-2] Length = 367 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 46/369 (12%), Positives = 122/369 (33%), Gaps = 14/369 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS--TESLNILLKISGYLIP 58 MK I R + ++ L L + + + ++ + V S + L IP Sbjct: 1 MKVLRNLIYREVIQAVLYVSLAFLALFFFFDLVDEMRWVGSGNAGYTATRALLFVALSIP 60 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 L + P + V+ +++E I+ +G ++ +L L + + + Sbjct: 61 GHLYELMPIAVLIGAIFVMAKFAQSSEFTIMRTSGMGPWLALRTLLILGMSFVLLTVLVG 120 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKI--SKYNPNNTLQGIFIV 176 + I P + ++L ++ ++ L + D + +P + + Sbjct: 121 DYIAPAADNFSQKLRVVSKGQISRGATGAWLKEKQGDHSVAINVGAVKSPGDFVNVRIFE 180 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + AQS +D DR+ L + + + + ++ + ++ Sbjct: 181 FDSKGRIAAQINAQSAQVDEDREQWTLQGVQGSKVAQDGDVTKLSPISEASMNWPTKVTA 240 Query: 237 TIVLKA---NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 +V A D+ + L + + + Y EF +++ L ++ ++++ A Sbjct: 241 AMVSGALLKPDRMTTIALFQFIRHLQDNGQAAQKYEIEFWRKVFYPLSCLVMVVLALPFA 300 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCI-----SS 348 R +F + F + + ++ + + S Sbjct: 301 YL--HFRSGGITAYVFGGVMAGISFFLLNNVFGYIGTLQSWWPWLAAAAPGLLYTALSLS 358 Query: 349 IFLLMIKKK 357 F ++ ++ Sbjct: 359 AFGWLVLRR 367 >gi|254467255|ref|ZP_05080666.1| permease YjgP/YjgQ [Rhodobacterales bacterium Y4I] gi|206688163|gb|EDZ48645.1| permease YjgP/YjgQ [Rhodobacterales bacterium Y4I] Length = 367 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 49/343 (14%), Positives = 106/343 (30%), Gaps = 16/343 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK +LY R + FL+ C ++ + +I + ++I + L L+ +S IP Sbjct: 1 MK-LDLYYARRFLQWFLVICAVLMTLVILIDLNEQIRRFEGAGLGLPQLVGLSLLNIPAA 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + T + + R++EL++ G S I + + A + + N Sbjct: 60 LSEFLPLIMILTTIVLFVGLARSSELVVTRAIGRSGIRALAAPVLAAAGIGVLAVTMLNP 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEEN---LFFRLDDDLYIKISKYNPNNTLQGIFIV- 176 I + + L+ + + I + I + Sbjct: 120 IAAATANRYQDLAETYHNGGPSALSLSGEGLWLRQGGARGQSVIHAKGYSGDAADITLHD 179 Query: 177 -----DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI-SKDISIMKFKSYTLQT 230 S + A+S + D IL + + + + + L T Sbjct: 180 VSIHAYSTAGGPVRRIIAESARL--DGSNWILTNAKSWPLTAGINPEAGAASHDELQLPT 237 Query: 231 ESANSSTIVLKANDQNLS-FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 +S + L + + Y + L + LF + L+ Sbjct: 238 TLTTDRIRDTLGTASGISIYDLPATIRELSAAGFTTKRYEVRYQAELARPLFLIAMVLVG 297 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN 332 R + +++ + FG+++ ++ E Sbjct: 298 ASF--TMRHARFGGTGLAVLMAVLLGFGLYFIRNFAQILGENG 338 >gi|317402625|gb|EFV83184.1| membrane protein [Achromobacter xylosoxidans C54] Length = 392 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 48/372 (12%), Positives = 113/372 (30%), Gaps = 26/372 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M++ Y+ R I RS + + ++ + ++ ++ V S+ LL + IPT Sbjct: 1 MRTARRYLAREIYRSCAVVLMALLGLFTFFALVDDLDNVGDK-FSMMALLYMQALAIPTR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L + + EL+I+ +G S + L++ + + I L I + Sbjct: 60 LYDLLPIGLLIGAILALAGLAQRNELVILRVSGVSGMRLLRMLWIVTIPLMIGAALLSEY 119 Query: 121 IEPKCRSTIKQLSAKAQLAL-----TFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI 175 + P + + + Y + + + Sbjct: 120 VTPWAEMKSGEANLMFRGKAGGDRLNSGYWFKEPTANGGTRIINIAALQGDGQVTGVTLY 179 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD--------------ISIM 221 +D + A +G +L D R + + + + Sbjct: 180 EFKKDLTLSVLSTAPNGLFAHGDL--VLKDVSETRLDDNAAETLADARPPKNPPAVVVKV 237 Query: 222 KFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLF 281 ++ + VL ++ LL+ + ++L Sbjct: 238 PERTVDTTLSAERLLARVLTPERMSIVTLLD-YVDYLRNNQLQYGRQVVALWRKLAYPFT 296 Query: 282 PVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL 341 ++ I+ R+ +FI + + G F + + + + P L Sbjct: 297 LLVMITIAAPIGLM--QTRRGGVGAKVFIGILLGVGFF-MLNQLALNVGMLGKWPPWLTA 353 Query: 342 FLFCISSIFLLM 353 I ++ L + Sbjct: 354 LGPNIGAMALAL 365 >gi|228471152|ref|ZP_04055971.1| permease, YjgP/YjgQ family [Porphyromonas uenonis 60-3] gi|228307092|gb|EEK16166.1| permease, YjgP/YjgQ family [Porphyromonas uenonis 60-3] Length = 361 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 48/359 (13%), Positives = 122/359 (33%), Gaps = 7/359 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK-ISGYLIPTV 60 + + YI ++ S + I+ +A + ++++ + L ++ +P Sbjct: 7 STVDRYIFIQFLATYFFSIVLILAVAIAFDVTEKLDRLLQPDVPLRAIIWDYYANFVPYY 66 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +P + V + + N+E++ I + G S L+KP + A +++I F+ + Sbjct: 67 ANLFSPLFVFIAVIYVTSRLAENSEIIAILSCGMSFRRLLKPYMLGAAVIAILTFLLSSF 126 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P ++ + + ++ + ++ +S YN + + F +D + Sbjct: 127 VIPPGN-RVRIDFQNRYIKDKRITYANAIQMQVAPETFMFMSYYNDESKVGYTFSMDRFE 185 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + K + I L D + + + + Sbjct: 186 GKDLKSRVMANSIIYDTLYNWQLQDYTITYFGERQDTLFRGNQLDTIIPITPRDFLVTEG 245 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 L + + R + Y E HKR+ I L+ + A R Sbjct: 246 DVEMLTTPELYH-SIQQQRMRGAATQLYAIELHKRIAMIPASFILTLMGVSL---SARKR 301 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYT 359 + + + LS+SF ++ F + P++ +L + + + + + Sbjct: 302 KGGMGLALAVGLSLSF-IYILFMTVTASFAVTGAMAPVVAAWLPNLVYLGISFVLYRLA 359 >gi|114776388|ref|ZP_01451433.1| hypothetical protein SPV1_01672 [Mariprofundus ferrooxydans PV-1] gi|114553218|gb|EAU55616.1| hypothetical protein SPV1_01672 [Mariprofundus ferrooxydans PV-1] Length = 352 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 50/358 (13%), Positives = 123/358 (34%), Gaps = 12/358 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M +I L++ ++ I +I+ + + ++++ IP + Sbjct: 1 MPVVFRWIFSGCLSRSLVTMSALLAIFVIIESFDKARYL-GHGLDGRLMVEYMLLKIPFM 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + + L ++RN E++ + G ++ P+ +A+L ++ FI Sbjct: 60 LSEFMPVIMLIGASLYLIELSRNQEVVALRAAGLGINKVLLPLSSVALLAALASFIIGEW 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + Q+ S + + P Q ++ Sbjct: 120 VTPVTNTRLDQIEQVHIQHKKSSQPGVQWLKDG-----HRFFRLTPLTNHQFALLMLKTA 174 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + S + L+D V S + + + K K+ +++ + + Sbjct: 175 PDGAWLQRIDSPRAHYSQGVWSLSDARVSTPSSD-QVMHVEKLKNMEVKSAIGPETADLP 233 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K + S L + NN + TY H++ + L ++ +++ R Sbjct: 234 KPGHMDFSELYH-YINNLKHAGLGAGTYVYALHRKFSAPLACLLMVIMAAALCLHTG-NR 291 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQN---PYYIPILYLFLFCISSIFLLMIK 355 + + +S+S+ + + N P + L +F +++FLL+ + Sbjct: 292 NSRASWGLMLSISLGLVFYVIGNAGYLLAASNRIPPAFAAWLPSLVFGGTAVFLLLKR 349 >gi|329894348|ref|ZP_08270218.1| putative permease [gamma proteobacterium IMCC3088] gi|328923144|gb|EGG30467.1| putative permease [gamma proteobacterium IMCC3088] Length = 372 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 50/368 (13%), Positives = 131/368 (35%), Gaps = 24/368 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R I + L + + + Q ++R+ V+ + L I + IP+ L Sbjct: 2 LIVRYLTRDILVNTSAVSLVVFLVVFSSQFVRRLADVAEGDLAAGFLASIMFFSIPSYLE 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + L + ++E++++ +G L++ VL +++I + Sbjct: 62 LILPLGFFVGLMLALGRLYTDSEMVVLSASGIGPWHLLRWVLVSGAVVAILSAGLSLGLT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ + L +A + F R ++ ++ + + Sbjct: 122 PWTKTKVLNLVTEASNEKGLAAFVPGRFQRRSGGFDTFYAESVESDQQGLKGLFVAEQGM 181 Query: 183 TH------KIYYAQSGSI----DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 + I YA+ G + + + + L +G ++ P + + +F+ + Sbjct: 182 SSAGEPLVTITYAERGRVVSSQEHGGRYLELLNGRRYQGQPGQLEYRVTEFEVLGERLPD 241 Query: 233 ANS--STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 A+S S D + +L + N+ + + H RL+ L P +++ Sbjct: 242 ADSAGSAFGDDLYDALPTQMLFLDNNSAST---------ATLHWRLSLVLMPFNLAFLAL 292 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 A R+R + + ++ + G + + + + L Sbjct: 293 GLA---RTDRRRGRYTMLLPAIVLYLVYLVGLASLRGAAAEGASVGSLWGLHAVIAGIGC 349 Query: 351 LLMIKKKY 358 ++++ ++ Sbjct: 350 VVLLWPQW 357 >gi|290473524|ref|YP_003466394.1| putative transmembrane protein, transport [Xenorhabdus bovienii SS-2004] gi|289172827|emb|CBJ79598.1| putative transmembrane protein, transport [Xenorhabdus bovienii SS-2004] Length = 366 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 53/356 (14%), Positives = 129/356 (36%), Gaps = 19/356 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFSQKLVEVLGAAVEGSVPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + + +E+ ++ G + L+K L LA+ S+ + Sbjct: 62 LILPLSLFLGVLMTFSKLYTESEITVMHACGLGKGVLVKSALILALFTSMLAAANVLWFT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +Q+ A A+ + + + E F D + N + +F+ R Sbjct: 122 PWSSKYQEQVLADAKANPSLAAIMEGQFKPSRDGNMVLYIGDVKGNNFENVFLAQLRPVN 181 Query: 183 T--HKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A G + Q +L+ G + + + +D I FK+Y + Sbjct: 182 NQRPSVVIADGGHMEERPNGNQVAVLHQGVRYEGTALMRDFRITDFKNYQAVIGHKAADI 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 K + S L + + R+E H RLT + ++ L+ A Sbjct: 242 DSDKVEQKTFSQLWHKGDEDS----------RAELHWRLTLIVSVLVMALL---VVPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + ++ ++ + ++ + F S + + P +++L + L + Sbjct: 289 VNPRQGRVLSMLPAMLLYLIFFLLQSSLRSNGGR-GKLDPAFWMWLVNGAYFALAL 343 >gi|281424311|ref|ZP_06255224.1| putative membrane protein [Prevotella oris F0302] gi|281401580|gb|EFB32411.1| putative membrane protein [Prevotella oris F0302] Length = 432 Score = 98.5 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 51/362 (14%), Positives = 119/362 (32%), Gaps = 8/362 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPTV 60 K + YI++ +++ S I+ I+ V+ I + + S L I+ IP Sbjct: 73 KRLDWYIIKKFIGTYIYSIALIISISIVVDINENLAKFSEYHAPLKAIVFDYYMNFIPYF 132 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +P + + + N+E++ + G S L++P + IL+S F Sbjct: 133 ANLFSPLFVFIAVIFFTSKLAGNSEIIAMLAAGVSFKRLMRPYMITCILISAVSFYLSGY 192 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + + + + + N G + +D Sbjct: 193 VIPHSNVIRQDFESLYKNNKKNTAADNVMLQVGSGVIAYIQQYDNNTKRGYGFSLDKFQD 252 Query: 181 TQTHKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A I + + ++ + + + I + K T+ E + Sbjct: 253 KKLVSHMTATEIQYDTISDSKYHWTALNYKIRKFNGYREQIENGEKKDTTIMMEPTDLVY 312 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L + + + Y+ E+HKR+ I +I + A Sbjct: 313 SKGQQETFTNPELSDYISKQIDRGSSNVVQYQVEYHKRIAASFASFILTIIGLSL---SA 369 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 R+ + I L++SFG + + N P++ ++ + + + Sbjct: 370 KKRKGGMGLYLGIGLALSFG-YIMLQTVSSTFAINANLPPVIAAWIPNLIFAVVAYFCYR 428 Query: 358 YT 359 Sbjct: 429 QA 430 >gi|254447192|ref|ZP_05060659.1| permease YjgP/YjgQ family protein [gamma proteobacterium HTCC5015] gi|198263331|gb|EDY87609.1| permease YjgP/YjgQ family protein [gamma proteobacterium HTCC5015] Length = 353 Score = 98.5 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 40/363 (11%), Positives = 131/363 (36%), Gaps = 18/363 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y++R + +S L ++ + ++Q ++ + + + + + Sbjct: 1 MHITDRYLIREVAKSSAAVLLVLLVLMVGNTLVQLLSDAADGNMAPQYIWPLLVITLANY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + + + ++ E+ + G +P+ +AI +S+ + Sbjct: 61 LVLFMGLSLYLGGMLAFGRLYKDAEMAAMVACGMGPWDFFRPLFKVAIPISLAGLVLSVF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + ++ A+ ++L E F L + ++ + + + Q Sbjct: 121 ILPWMAGLQAKFTSDAEKPSVETHLREGEFNELGNGIFF-VEEQSGGALSQVFVYSRDPS 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ ++ + + L G +++ + + I ++++ Y + ES N+ Sbjct: 180 GESIQVAESGRVEDAPSGYELTLQQGRLYQINTE-QRIRDIRYQEYEVMVESPNAVVDEQ 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 S L+ + +E+ RL+ + + L++++A Sbjct: 239 VLAATQTSDLMRSDNPLE----------VAEWQWRLSVPIGCL---LLAVLAFPLSYTSP 285 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMIKK-K 357 ++ + ++ + S + ++ P ++ + + L ++ I L++++ Sbjct: 286 RKGAFSKLGYAILVYILYSNFLSLGRSLVQNQEVPLWLGMWWAHLPVLALIIGLLLRRYG 345 Query: 358 YTK 360 + + Sbjct: 346 WPR 348 >gi|241761652|ref|ZP_04759739.1| permease YjgP/YjgQ family protein [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373960|gb|EER63493.1| permease YjgP/YjgQ family protein [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 364 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 42/358 (11%), Positives = 112/358 (31%), Gaps = 9/358 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQIL-QRINLVSSSTESLNILLKISGYLIPTV 60 + Y+ + ++FI + +L + +++ L P + Sbjct: 9 RQIAFYLSKLFVVRCFAVLAALIFILQTLDMLGESARILAVKGNGQAELFHYVLLRTPQL 68 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + PF + L+++N+N+E++ + G S ++ P++ L+ F+ + Sbjct: 69 IARFLPFAVLLGVLITLSTLNQNSEIISMKAAGISAHQILMPLIASCFLIGCVSFVFNDR 128 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQG---IFIVD 177 + + + + A + + D D I + I + + Sbjct: 129 LVTRATAKLDAWQAVDYGQPPPAATSGVNIWLRDGDHLIHVDNVQGYGDNVRLSGITVYN 188 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 I A +G + +V + ++ + Sbjct: 189 RSQKTLVSILSADTGQWTGHGW----HLNKVKSFDVAADTVTEKPVLDINTDLPPERFTL 244 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +KA++ + L + + ++ R T ++ ++ VA A Sbjct: 245 ADVKADEMEVVPLYRAIKA-LDAAGRPTDELKASLIHRFTGAFAAILMPILGSVAGFGLA 303 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + I +SL ++ V F+ + + P + F+ + ++I+ Sbjct: 304 RSGRLFVRIVIGMSLGFAYFVADNFALTMGNLGTYPPLLASCSPFILFLLIGEAVLIR 361 >gi|158337167|ref|YP_001518342.1| YjgP/YjgQ family membrane protein [Acaryochloris marina MBIC11017] gi|158307408|gb|ABW29025.1| membrane protein, YjgP/YjgQ family, putative [Acaryochloris marina MBIC11017] Length = 383 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 48/365 (13%), Positives = 117/365 (32%), Gaps = 7/365 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + +ILR ++ + I + + + ++ T S L++ +P Sbjct: 18 SRLDRFILRAFWMPWVFAFGAFTTISFSIGALFDTLRRLTEGTLSSVDALQVLVLQLPRF 77 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + + + R EL+ + GTS +I+P L ++++++ Sbjct: 78 MVLALPMSMLLAPLLTYSQLARKNELIALKACGTSVYRVIRPALCFSLIVAVSTLTLNEW 137 Query: 121 IEPKCR---STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD 177 I P ++ +Q+ + + + ++ L + I+ Sbjct: 138 IVPPATAAVHRLQAQQTVSQITAIPRQNIVHQTYHHQRLTQLFHARAFDGEALHQLTILQ 197 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISI-MKFKSYTL-QTESANS 235 +D H I+ A+ D Q IL+ G + P+S + FK + Q Sbjct: 198 FQDRHLHHIWLAKQAIWDSTHQQWILSQGTRYTIDPVSGLYQQVVPFKRHPFHQVSPQEL 257 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + + + + + L + L+ + +H + V F L+ + Sbjct: 258 AEVAHQPISLHETQALIQQIKQ-SGNLPTLQRLQVRWHALMAFPWIGVGFTLMGSSLGCQ 316 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + + + + + + L + + LL Sbjct: 317 STSKQGSLGFGLSSLLIFGYYTFSFICQTLGDAGIWSASIAGWLPIVVLLTIGSALLHHN 376 Query: 356 KKYTK 360 Y+K Sbjct: 377 NTYSK 381 >gi|226943299|ref|YP_002798372.1| YjgP/YjgQ family permease [Azotobacter vinelandii DJ] gi|226718226|gb|ACO77397.1| permease YjgP/YjgQ family [Azotobacter vinelandii DJ] Length = 353 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 44/355 (12%), Positives = 103/355 (29%), Gaps = 4/355 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + S L +V +A + + + V L +P Sbjct: 1 MGKLDRYIGASVSLSILAVLGVLVGLALLFSFVDELGDV-QGDYDLAAAAWYVFLTVPQR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L S+ ++EL +I +G S ++ V+ ++L + + Sbjct: 60 TYEMLPMGALIGCLIGLGSLASSSELTVIRASGISLGRIVWAVMKPMLVLMVLGGLLGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + AQ + L+ R ++ + Sbjct: 120 LAPWAENKAEAHRSLAQGGGEAQTAKHGLWHRQGNEFVHINAVQPGGVLYGVTRYRFDDQ 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 +A+ L D R S +++ + + + T+V+ Sbjct: 180 RHMLWSSFARKAEFRGGNWQ--LEDVTTTRFLERSTEVAKAATEQWDILLSPQLLGTVVM 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 +++ L + + Y F ++ Q L L++I Sbjct: 238 DPEALSVTGL-WHYIHYLAEQELNNARYWLAFWGKVLQPLVTAALVLMAISFIFGPLRSV 296 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + F +F ++ + +L C L+ + Sbjct: 297 TLGQRLFTGVLAGFVFRMFQDLLGPSSQVFGFSPLLAVLLPAGLCALLGVYLLRR 351 >gi|256027206|ref|ZP_05441040.1| hypothetical protein PrD11_04301 [Fusobacterium sp. D11] gi|289765183|ref|ZP_06524561.1| conserved hypothetical protein [Fusobacterium sp. D11] gi|289716738|gb|EFD80750.1| conserved hypothetical protein [Fusobacterium sp. D11] Length = 363 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 50/362 (13%), Positives = 114/362 (31%), Gaps = 11/362 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K ++Y+ + + FLM+ + + + + Q + I ++ +L L+P + Sbjct: 3 KKMDIYVSKYFIKFFLMNIIGFMGVFLLAQTFKIIKYINQGKLVGGEILDYILNLLPKMF 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + ++ M N E++ + +G + +++ L +A ++S+ +F N I Sbjct: 63 VETAPLSVLLAGLITISIMASNLEIVSLKTSGIRFLRIVRAPLIIAFVISLIVFFINNSI 122 Query: 122 EPKCRSTIKQLSA-----KAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 K + I +L T L +I++ + Sbjct: 123 YTKSLAKINFYRRGEVDESLKLPTTKENAFFINNADGYLYLMGEINRETGVAENIEVVKF 182 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 ++ ++ +I A+S D + I ++ ++ S Sbjct: 183 ETEISKPKEIITAKSAKFDTEENKWIFSNVNIYNVDTKETITKTEYKSKLYKDDPSNFIR 242 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L E Y SE KR + I I + Sbjct: 243 ASAEDPRMLTIKEL-KKTIKEQKSIGEDTRIYLSELAKRYSFPFASFIVAFIGLSV--SS 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMI 354 VR + + I + +G + S + N P + ++ I + + Sbjct: 300 KYVRGGRTTMNLVICVIAGYGYYLV-SGAFEAMSLNGILNPFIASWIPNILYLIIGIYFM 358 Query: 355 KK 356 + Sbjct: 359 NR 360 >gi|85716330|ref|ZP_01047303.1| permease YjgP/YjgQ [Nitrobacter sp. Nb-311A] gi|85696846|gb|EAQ34731.1| permease YjgP/YjgQ [Nitrobacter sp. Nb-311A] Length = 365 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 49/360 (13%), Positives = 106/360 (29%), Gaps = 15/360 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTV 60 + Y + L + I + ++ ++ + S ++ S ++ + S + +P + Sbjct: 6 NTLGRYFAGRFLVAALGVFVSIFLLLVLVDYIEMVRRTSGLASASALVVAETSLFRVPQL 65 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L +TPFC + +++R EL++ G S I P L AI+L N Sbjct: 66 LEKLTPFCVLIGAMTCYLALSRQLELVVARAAGVSAWQFISPALACAIVLGALATTVYNP 125 Query: 121 IEPKCRSTIKQLSAKAQLA------LTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF 174 + R K++ A+ S N + L G+ Sbjct: 126 LSANLRELSKRMEAELFGGVSGGGLQDASGFWINQVTDDGQAIINAARSEQQGVRLTGLT 185 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + + + D + L G R + + + F + A Sbjct: 186 VFRFNPHSRFEERIEAREAALEDGRW--LFKGV-RRFTLDNPPVEQETFV-LSTSLTPAQ 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + L + YR ++HK + Q +++ + Sbjct: 242 VQNSFSTPETVSFWQL-PGYIKSSESSGFATAGYRLQYHKLIAQPFLLAAMVMLAASVSL 300 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R + + F ++ S + + + PI +L + Sbjct: 301 --RFFRFGGVQKMVLSGVGSGFLLY-VLSKVTEDLSKAELMNPIAAAWLPVCVGGLTGFL 357 >gi|226940338|ref|YP_002795412.1| permease YjgP/YjgQ [Laribacter hongkongensis HLHK9] gi|226715265|gb|ACO74403.1| permease YjgP/YjgQ [Laribacter hongkongensis HLHK9] Length = 363 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 46/362 (12%), Positives = 119/362 (32%), Gaps = 18/362 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F ++R + ++ I V Q+++ + +S + ++ + + Sbjct: 2 IFYRSVIRELTAVAFAVFSVLLAIMVVTQVVKLFDKAASGALPADAIVALIAFSTLGYFG 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + + VLT + R+ E+ + +G S I+PVL A+ L++ + + Sbjct: 62 TLLSITLFISVIVVLTRIWRDHEMAVWLTSGLSPNRWIRPVLAFAVPLTLLIATVSLFLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + + + S + +F D + + + Sbjct: 122 PWAARKGSEYTDILRQQDEISAVAPGVFKESRDGSKVYFVENYSGEAGSATNLFVRSIEN 181 Query: 183 THKIYYAQSGSI----DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 I + + L DG + + D +++F+ Y ++ +T+ Sbjct: 182 GKTSLVFAREGIVRTEPNGERYLYLTDGRRYEGEAGAADWKVVEFRKYKVKINQNIRTTV 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + S L N + R+E R++ + +I ++A Sbjct: 242 DTRTKSVPSSMLWLANTPDA----------RAELAWRVSLPIASLILA---LLAIPLSYY 288 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-PYYIPILYLFLFCISSIFLLMIKKK 357 + + + I++ + + + I + +++L L + LLM+ ++ Sbjct: 289 NPRSGQTFNLLIAIFVYQLYYNLMGVVQSWISKGELSVWSMVWLHLTMLGLFVLLMVMRR 348 Query: 358 YT 359 Sbjct: 349 KP 350 >gi|222099907|ref|YP_002534475.1| Permease YjgP/YjgQ family protein [Thermotoga neapolitana DSM 4359] gi|221572297|gb|ACM23109.1| Permease YjgP/YjgQ family protein [Thermotoga neapolitana DSM 4359] Length = 1048 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 55/342 (16%), Positives = 122/342 (35%), Gaps = 4/342 (1%) Query: 14 RSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMET 73 FL+ + + + Q +L+ + L + Y +P + M P + Sbjct: 1 MPFLIGLGGFIIFVSIEILYQLSDLIVRHRVGIGKLFLLLYYYLPYFVAMGVPVGVLLSI 60 Query: 74 TNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLS 133 + ++ + EL+ I G S+ LI P LFL++LLS+ +F + + P +S ++ Sbjct: 61 FWTFSKLSEDRELMAIQVHGISQKNLIVPFLFLSVLLSVIVFFLNDQVVPVYQSRAEEAM 120 Query: 134 AKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGS 193 +K L ++ EN+ ++ +D Y + KY+ ++ ++ + + Sbjct: 121 SKYVLKKPEVFVVENVISKIGEDQYFYVEKYDEKTNTLWNVVIFKYGSEEKIV---TAKR 177 Query: 194 IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS-TIVLKANDQNLSFLLN 252 + + L DG + + F L + V K + L Sbjct: 178 VQKREERWYLFDGRYYTVDKDGFLKLDVHFSEMELDITEDIENLLRVGKTPREMTGKELK 237 Query: 253 PNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISL 312 + E R L P++ L+ + + L + + F+ + Sbjct: 238 EKIEFFRKVGIKPSPWIVELQSRYANSLTPIVIVLVGVPLSLLFQLRSKSWGVIFTFVLV 297 Query: 313 SISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + G S + + +P + P + +F + L ++ Sbjct: 298 VLYQGSGAWLSAMGKENLLDPGFAPWIPNIVFSVMGGLLFVL 339 >gi|167718522|ref|ZP_02401758.1| hypothetical protein BpseD_05837 [Burkholderia pseudomallei DM98] Length = 365 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 52/365 (14%), Positives = 127/365 (34%), Gaps = 22/365 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ I +++ + +S + +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTIMLTSMMIRIVGYAASGEVNPKDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M+ + VLT +++E+++ +G S LIKP+ A + I + + Sbjct: 62 MILVGTLFVSILFVLTRWYKDSEMVVWLASGVSLTRLIKPIGVFATPIVILIAFFAFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P K + A+ Q S L F + + + + + + + Sbjct: 122 PWSNQQSKLIKARFQQRDEVSLLAPGQFRESAANHRVFFIEKMSPDQAKVQNVFVTTTEH 181 Query: 183 THKIY----YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + ++ + I+L +G + P + IM+F+ Y ++ +S + Sbjct: 182 GKVNVVVSQTGHTETMKNGDRFIVLENGRRYDGVPGQPNFKIMEFERYGVKIQSKQIVSQ 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 L NP N +EF R L + +++I A Sbjct: 242 PTTTGTSTPDLLRNPTNQNL-----------AEFAWRAGLPLIAINLMILAIPLAY---Q 287 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI----LYLFLFCISSIFLLMI 354 +R + + +++ I + + ++E+ + L++ + I ++ + Sbjct: 288 NPRRGRTVNLVMAVLIYLTYSNLLNVVQSQMERGKIAFGLGLIGLHVIVAGIVALLFWLR 347 Query: 355 KKKYT 359 + Sbjct: 348 VRNRP 352 >gi|88859092|ref|ZP_01133733.1| hypothetical protein PTD2_08809 [Pseudoalteromonas tunicata D2] gi|88819318|gb|EAR29132.1| hypothetical protein PTD2_08809 [Pseudoalteromonas tunicata D2] Length = 348 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 45/344 (13%), Positives = 117/344 (34%), Gaps = 23/344 (6%) Query: 24 VFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRN 83 + I + ++ + + + +++ + +P + + P + + + + Sbjct: 1 MTIFVSEKFVRILTEATDGSLPAKLIISMLALKLPQLASFILPLSIFLGIILAYSRIYAD 60 Query: 84 TELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFS 143 +E+ + G S +++ L + +L++F ++ P +L KA+ Sbjct: 61 SEMTVFKACGVSEWYVVRVTLVSSFVLALFAGALTLVVAPWASEQEYRLEEKAKAESGLF 120 Query: 144 YLEENLFFRLDDD----LYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDL--- 196 L F + ++ I++ + + + I Sbjct: 121 SLRAGRFQQTGNEKAVVFIHDINQGGTELNKVFVAQFSENEKRPQARIVYAQHGIVEEGA 180 Query: 197 -DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNP 255 Q + L G+ + ISK++ + +F Y +Q + K + S LL N Sbjct: 181 SGEQQLKLAAGKHYETDGISKELKVTEFSGYQVQIQEQAIEHQRRKLEAISSSALLQMNT 240 Query: 256 NNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSIS 315 + ++F RL L +I I++ + ++ K + ++ Sbjct: 241 ADAA----------AQFQWRLAIPLSILILTFIAVPL---SEVNPRQGKFAKLVPAIVFY 287 Query: 316 FGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMIKKK 357 F + I Q P + + ++ L + LL+++ + Sbjct: 288 LIYFILLNGAKFAIEDGQIPVGLGLWWIHLTALFIGMLLILRGR 331 >gi|154246776|ref|YP_001417734.1| permease YjgP/YjgQ family protein [Xanthobacter autotrophicus Py2] gi|154160861|gb|ABS68077.1| permease YjgP/YjgQ family protein [Xanthobacter autotrophicus Py2] Length = 364 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 48/353 (13%), Positives = 106/353 (30%), Gaps = 14/353 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTE-SLNILLKISGYLIPTV 60 + Y R + ++ L V + ++ L+ + + ++ +L ++ Y P+ Sbjct: 4 RILGFYFARRFASAVVLIFLSCVTLIVLVDFLEMARRTADREQVTVGLLALVTLYRAPSF 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + PF + ++R EL++ G S I P + +A L+ +F N Sbjct: 64 TEQLMPFAVLFGAISTFVLLSRRLELVVARAVGLSVWQFITPPVLVAFLIGVFSTTVFNP 123 Query: 121 IEPKCRSTIKQLSAKAQLALTF------SYLEENLFFRLDDDLYIKISKYNPNNTLQGIF 174 + + Q+ + + + +D I+ Sbjct: 124 VSADFKERANQIEGEIFGSSSSGLLPQGKKEFWVRQQSVDGQSIIQAQATRQGGRALSGV 183 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 +V D + ++ S L A IL D R D + Sbjct: 184 VVFEFDKADRLVERVEARSATLGDGAWILTDA---RVLVPGLDHQHYDTYLIATNLDPKQ 240 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 ++ + L + E YR + L + V LI+ V Sbjct: 241 IQESLIAPETVSFWQL-PAAIRSAEQSGFGAERYRLQLQSLLARPFLLVAMVLIAAVVGL 299 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCIS 347 + R I + F ++ G + + + + P+ + ++ Sbjct: 300 --RVFRFGGVGQTILGGVLAGFLLYVG-TKLAEDLGDAGFVHPVAAAWFPAVA 349 >gi|91206136|ref|YP_538491.1| putative permeases [Rickettsia bellii RML369-C] gi|91069680|gb|ABE05402.1| Putative permeases [Rickettsia bellii RML369-C] Length = 360 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 70/364 (19%), Positives = 160/364 (43%), Gaps = 13/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y ++ I ++ + + W+ Q+L+ + L + L + ++PT+ Sbjct: 1 MLLYRKYFIKNILPLLIVITFSMTSLVWITQVLKLLYLF-DKGIKVMDFLSLIILVLPTL 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + + ++ +L+I+ +G + L P L++A+++++ + + Sbjct: 60 LFILLPIITVITIIYIYNNLKIERQLIILQTSGVGNLQLALPALYVALIVALLAYYISST 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +K + + S +EE F ++ D+ + I K + N ++G+ I D+R+ Sbjct: 120 VMPLSHINLKSRLSFIKNNYISSMIEEKTFNKITKDITVYIDKKSTGNVMKGVIIFDNRN 179 Query: 181 TQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--- 235 T + +A SG +I + L+ G + +I+ + F S ++ ++ N Sbjct: 180 TDNPSVVFANSGILNIHENDPIFELSKGSRQEYDI-NGNITQLTFDSLMIKLQNDNPLIS 238 Query: 236 --STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 +T +AN+ + LL P + P +E H+R+ L+ + +++ Sbjct: 239 QRTTHNKEANEYYIEELLEPPVD---LNPMKKIKLIAEAHQRIIWPLYNFVLPFLALAVF 295 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 K ++ + +F +LS+ F + + +N +I YL +F I SI L + Sbjct: 296 LKYPYSKKTTFMPILFAALSVLIATSAHF-TLQNFASKNLAFITACYLNIFFILSIGLYL 354 Query: 354 IKKK 357 +K Sbjct: 355 FIRK 358 >gi|299530038|ref|ZP_07043465.1| permease YjgP/YjgQ [Comamonas testosteroni S44] gi|298722018|gb|EFI62948.1| permease YjgP/YjgQ [Comamonas testosteroni S44] Length = 369 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 52/365 (14%), Positives = 131/365 (35%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ I + + RSF + + ++ + + +++ + + S + ++ + G+ + LP Sbjct: 2 LFDSSIRKELARSFGATAVVLITVVMTMMLIRTLGQAYKGSVSPSDVMLVMGFTVLGQLP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + + L+ M R++E++I G +L+KP+L A + + + + Sbjct: 62 TILGLSLFVAIVGSLSRMYRDSEMVIWFAAGQGLASLLKPLLRFAWPVILITAVLALGVL 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P I+Q+ + Q + F + + + + + Sbjct: 122 PWSYQQIEQIKTQFQQRSDLDRIAPGEFQESAGGTRVFFVDKDSPSDMAASNVFVVSRDP 181 Query: 183 THKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + G+ + ++ +IL DG+ + I +FK Y +Q ++ N TI Sbjct: 182 GKESVTSAKGAHLAVIKGQRMVILEDGQRMETRSDDGSVRITEFKEYGVQVDNDNPVTIE 241 Query: 240 LKA-NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 A L+ + RS RL + F ++ + ++ Sbjct: 242 EMAARSMPTKDLI----------GKDEPIARSVLAWRLGLPFAALNFVILGLAI---SSV 288 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY----YIPILYLFLFCISSIFLLMI 354 + + I+L + + + N + +L+ + +S + LL Sbjct: 289 NPRAGNSSSLMIALFAFIVYYNLMTLGESWVSANKIGMWGILGLLHGSILIVSVLVLLAR 348 Query: 355 KKKYT 359 +++ Sbjct: 349 HFRWS 353 >gi|262370180|ref|ZP_06063507.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] gi|262315219|gb|EEY96259.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] Length = 356 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 41/356 (11%), Positives = 108/356 (30%), Gaps = 4/356 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + ++ + + L + + + + L + + L+ + P L Sbjct: 5 RIVAKHVTKTTAMAMLGATAILSVLQILFTYLGELGSLKE-GYGAWDALRYVLWGAPQYL 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + + L ++ N+EL+++ + G S ++ V+ A++L + F + Sbjct: 64 YEILPIAALIGSVLGLGTLASNSELIVMRSVGVSLWRIVGWVIRSALILVVLSFALSEWV 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P K + + A + +Q + + Sbjct: 124 IPYTNEQAKGVKSHRTAAELGEVRGYWTREGQRFIYVDYANSQGQLKNVQ--VVDFDNNA 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + + A+ G D + I+ N +V + L + + + Sbjct: 182 RLKGVLNAEQGQFVQDGRWILENTAQVDLLPTGNATAQKAAETPLALALQPKYVHMVTID 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 D + S L++ Y ++ +TY+ F +++ + LI+ + Sbjct: 242 PEDLSPSQLVSFMSYMHEY-SQVPKTYQLAFWQKVASPFALIALVLIACSFIFGPLRQQS 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I + + F F + + L + L+ + + Sbjct: 301 MGFRLVIALFTGLGFFYLQDFLGYASLVYSPSPAWFVFVPILLMFVAGGYLLQRAR 356 >gi|257126590|ref|YP_003164704.1| permease YjgP/YjgQ family protein [Leptotrichia buccalis C-1013-b] gi|257050529|gb|ACV39713.1| permease YjgP/YjgQ family protein [Leptotrichia buccalis C-1013-b] Length = 358 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 44/358 (12%), Positives = 113/358 (31%), Gaps = 6/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI+ +SF++ + I + + + + + LK Y IP + Sbjct: 1 MNKLDKYIIVNYVKSFILGMMMFFLIFLLAESITLTGWLMDGKLKGSEALKYLRYGIPEI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + ++ M + E+ + +G S + + + L+S+ +F Sbjct: 61 VTNTAPLGVLLGSLLCISKMAKQLEVAAMKTSGISFARVALFPILFSALVSLGVFWLNYD 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + + L E++ F D + S + N ++ + Sbjct: 121 YLGRANTKKEDLKTLKIDNKEPVRSEKDFVFVKIDKRTVLFSGHANKNNGTMNYVTILKF 180 Query: 181 TQTHKIY--YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 K+ + ++ + ++ + K + + Sbjct: 181 ENGFKVIRKMYTASFAKINPKTNEWTFKDLKEYDSKTNVTKPFDTKKFKFVASMEDVLAS 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 +KA + + L + L R EF+ R++ L ++ LI + + Sbjct: 241 AVKAKNLTMPELREKTVYFTRVGADSLN-LRIEFYYRISFALSSLVMSLIGLSL---GSR 296 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + I +S+ I + + + + I + I + + + K Sbjct: 297 YVRGGAAVNIGLSVIIGYAYYGVSTILRSMAVSGTVPIYVACFVPLIIFLVVGIKLFK 354 >gi|149378264|ref|ZP_01895976.1| predicted Permease [Marinobacter algicola DG893] gi|149357461|gb|EDM45971.1| predicted Permease [Marinobacter algicola DG893] Length = 352 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 51/360 (14%), Positives = 127/360 (35%), Gaps = 29/360 (8%) Query: 16 FLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTN 75 L ++ + + ++ + ++ + ++L +I Y P L ++ P F + Sbjct: 1 MLAVSGILLLVFMSGRFIKYLADAAAGELAGDVLFQIMAYRFPGFLELILPLGFFIGILL 60 Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAK 135 M +E+ ++ G S L+ L +I + + + + P ++ + + Sbjct: 61 AYGRMYLESEMTVLFACGVSDKQLLMKTLLGSIPVMLVVGAMSLYVSPWGMKKVEGIFNE 120 Query: 136 AQLALTFSYLEENLFF--RLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTH-KIYYAQSG 192 + A F L F + + + L+G+FI + + I A+ G Sbjct: 121 QRQATEFEMLAPGRFQSLSSGERVTYTEALSEDKRRLEGVFIAEHSEDGKGLTIITAREG 180 Query: 193 SIDLDR----QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLS 248 S +D + ++L DG P + F++Y L+ S ++ Sbjct: 181 SQFIDEETGSRFLVLEDGARFEGLPGQLAYDVTGFEAYGLKIRSGSAGEKE--------- 231 Query: 249 FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPI 308 L +R+ H R T L I L+++ + ++ + + Sbjct: 232 --LEEGLATSALMASDDPEHRAMLHWRFTLPLIVPIVTLLAVRL---SRVNPRQGRFFHL 286 Query: 309 FISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLF-LFCISSIFL-----LMIKKKYTK 360 ++ + + + P +I +L++ LF + ++L + +++ + Sbjct: 287 LPAMLVYITYLGLLIVARDALEGGKVPEWIGLLWVHGLFLVLGLWLQFGPAWLYRRRLLR 346 >gi|196228894|ref|ZP_03127760.1| permease YjgP/YjgQ family protein [Chthoniobacter flavus Ellin428] gi|196227175|gb|EDY21679.1| permease YjgP/YjgQ family protein [Chthoniobacter flavus Ellin428] Length = 376 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 58/376 (15%), Positives = 124/376 (32%), Gaps = 24/376 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQIL-QRINLVSSSTESLNILLKISGYLIPT 59 MK + Y+ + +F ++ + + + I Q ++L+ + L +++ Y++P Sbjct: 1 MKLIDRYVGGQLLVTFSLAVSVLSVVLVLGNIFKQLLDLLVKNDTPLEVVVSFLSYILPF 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 L P+ F V ++ EL+ +G S L V LA F Sbjct: 61 SLSFTIPWAFLTAVLLVFGRLSAEHELVAFRASGVSIPRLCYTVFLLAAACVATCFWINI 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P+ + +K+ + + +L + I + N + + Sbjct: 121 DVAPRAQGKMKEALYNVAVTNPLAMFGADLVIDSFPNKKIYLESSNGPELHNLLVYESND 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIIL----NDGEVHRKSPIS-----KDISIMKFKSYTLQT 230 D K+ +A+ G I+ D + L D + K + + TL Sbjct: 181 DNLLLKVIFARRGLIETDGEKKQLLLHIYDATYEARDDDDVENLLKIKQGITMREATLPI 240 Query: 231 ESANSSTIVLK--ANDQNLSFLLNPNPNNPNYRPELLETYRS------EFHKRLTQWLFP 282 K LL+ E E +KR + L Sbjct: 241 SLEELHKKYHKGGLPSMTTGALLDHLSEKTESTMTEKERIEQHSATITEINKRYSFSLAA 300 Query: 283 VIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP--ILY 340 + F L+ + A +++ ISL ++ V++ F I + + + P + P +++ Sbjct: 301 ICFALVGVPLAITA---HRKETSIGFLISLCVA-LVYYFFIIIANTVREKPQWHPAELVW 356 Query: 341 LFLFCISSIFLLMIKK 356 + + + Sbjct: 357 VPNILCVVFGGWLFYR 372 >gi|221066428|ref|ZP_03542533.1| permease YjgP/YjgQ family protein [Comamonas testosteroni KF-1] gi|220711451|gb|EED66819.1| permease YjgP/YjgQ family protein [Comamonas testosteroni KF-1] Length = 367 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 45/369 (12%), Positives = 122/369 (33%), Gaps = 14/369 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS--TESLNILLKISGYLIP 58 MK I R + ++ L L + + + ++ + V S + L IP Sbjct: 1 MKVLRNLIYREVIQAVLYVSLAFLALFFFFDLVDEMRWVGSGNAGYTATRALLFVTLSIP 60 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 L + P + V+ +++E I+ +G ++ +L L + + + Sbjct: 61 GHLYELMPIAVLIGAIFVMAKFAQSSEFTIMRTSGMGPWLALRTLLILGMSFVLLTVLVG 120 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKI--SKYNPNNTLQGIFIV 176 + I P + ++L ++ ++ L + D + +P + + Sbjct: 121 DYIAPAADNFSQKLRVVSKGQISRGATGAWLKEKQGDHSVAINVGAVKSPGDFVNVRIFE 180 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + AQS +D D + L+ + + + + ++ + ++ Sbjct: 181 FDSKGRIAAQINAQSAQVDEDEEQWTLHGVQGSKVAQEGDVTKLSPISEASMNWPTKVTA 240 Query: 237 TIVLKA---NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 +V A D+ + L + + + Y EF +++ L ++ ++++ A Sbjct: 241 AMVSGALLKPDRMTTIALFQFIRHLQDNGQAAQKYEIEFWRKVFYPLSCLVMVVLALPFA 300 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCI-----SS 348 R +F + F + + ++ + + S Sbjct: 301 YL--HFRSGGITAYVFGGVMAGISFFLLNNVFGYIGTLQSWWPWLAAAAPGLLYTALSLS 358 Query: 349 IFLLMIKKK 357 F ++ ++ Sbjct: 359 AFAWLVLRR 367 >gi|67459766|ref|YP_247390.1| permease [Rickettsia felis URRWXCal2] gi|67005299|gb|AAY62225.1| Predicted permeases [Rickettsia felis URRWXCal2] Length = 369 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 63/363 (17%), Positives = 154/363 (42%), Gaps = 11/363 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y ++ I ++ + I W+ QIL+ + L + + ++PT+ Sbjct: 10 MLLYRKYFIKNILPLLIVVTFSVTSIVWITQILKLLYLF-DKGIKVMDFFSLIVLVLPTL 68 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + + ++ +L+I+ +G + + L P L+ A+++ + + + Sbjct: 69 LFILLPVITVIAVIYIYNNLKVERQLIILQASGVNNVQLALPALYAALIVMLLAYYISST 128 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P +K + S +EE F ++ D+ + I K + N + G+ I D+R+ Sbjct: 129 ILPLSHINLKSRLNFIKNNYISSMIEEKTFNKVTKDITVFIDKKSAGNIMNGVIIFDNRN 188 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI-SKDISIMKFKSYTLQTESANS---- 235 + +A SG++++ I + R+ + +++ + F S ++ ++ N Sbjct: 189 ADNPSVVFAGSGTLNIYDNNPIFELNKGIRQEYDVNGNLTQLTFDSLMIKLQNDNPLVSQ 248 Query: 236 -STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + +AN+ +S LL P + + +E H+R+ L+ + +++ Sbjct: 249 RTKHNKEANEYYISELLAPPHDLAITKKI---KLIAEAHQRIIWPLYNFVLPFLALAVFL 305 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + ++ + +F +L++ F + + +N +I Y L +I L + Sbjct: 306 RYPYSKKTTFMPVLFSALTVLLVTSIHF-ILQNFASKNLDFIFACYSNLIIALTIGLYLF 364 Query: 355 KKK 357 +K Sbjct: 365 VRK 367 >gi|206602448|gb|EDZ38929.1| Putative permease, YjgP/YjgQ family [Leptospirillum sp. Group II '5-way CG'] Length = 362 Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 62/365 (16%), Positives = 123/365 (33%), Gaps = 13/365 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ YI + + FL+ + + I VI +++I S +L ++ + Y V Sbjct: 1 MRILTRYIASELFKIFLLCFISLEAIYGVIDSVEKIKDFLSHHAALPLIGQYFFYRSIEV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 V P + T L +++N EL I G S + KP L L +L+S+ Sbjct: 61 SFRVLPMSGLLATLLTLGILSKNHELTAIRAAGISLVKATKPFLALGVLISLISIAMNYQ 120 Query: 121 IEPKCRS---TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD 177 + P IK + ++ N++FR + + ++ Sbjct: 121 LVPYAYQMTDYIKDVRIDQGKTGRVTFELNNVWFRHGNQDIYGARTIRDGGSELDKVVLY 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 D+ H + + ++ + DG + R P + I F+ Sbjct: 181 HLDSTFHLSWQIDAKTLRYHQGLWSFRDGRLTRFLPDGS-LKIESFQKMDTTLTRRPVDF 239 Query: 238 IVLKANDQNLSF-LLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 K +LS+ L+ E Y + + + L++I Sbjct: 240 TYEKTRMTHLSYPELDRYIALLEKSHLPREKYEVTRDAMIAFPIAAFLMVLMAIPFGI-- 297 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF-----LFCISSIFL 351 RQ ISL +S +W + + + +P + + +F +S Sbjct: 298 REGRQVGIAKGFGISLLLSMS-YWTIYSLGLALGKGGVLLPWISAWFANMIVFFVSISLF 356 Query: 352 LMIKK 356 L++ + Sbjct: 357 LLLNR 361 >gi|330993928|ref|ZP_08317858.1| Lipopolysaccharide export system permease protein lptG [Gluconacetobacter sp. SXCC-1] gi|329758874|gb|EGG75388.1| Lipopolysaccharide export system permease protein lptG [Gluconacetobacter sp. SXCC-1] Length = 371 Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 48/361 (13%), Positives = 100/361 (27%), Gaps = 18/361 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTVL 61 + LYI R + L F+ + + + + VS+ +++ +I+ IP Sbjct: 6 TLSLYIARQFTGATLAVIAFLTGLITMFDFIDLLRRVSTRPNVPTSLVSQIAFLHIPFAC 65 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF + + R++EL++ G S + + A+L+ + + Sbjct: 66 LEILPFGVLLGGILCFWRLARSSELVVARAAGISAWQFLAGPVICAVLIGAMATTCVSPL 125 Query: 122 EPKCRST-----------IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTL 170 S + +N D+ L Sbjct: 126 SSVMYRRAEALDRQYLRDNNGKSLNLSGGTLWLRQGDNGLVDHGVDIIHARQVRLNGGVL 185 Query: 171 QGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT 230 I R + + +G P + +F + Sbjct: 186 HIGGITIFRLGPDDGLLTRIEAQSGYLGGGRWILEG-ARMLRPDEMPSDMGRF-TLHADL 243 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 A + ++ L N +R F LT + L++ Sbjct: 244 TLAGVEESFASPDTLSVWAL-PGFIRQLNRSGFSTIRHRLHFQSLLTLPVLSGTMALVA- 301 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 A R+ I I ++ F +F S I + + P+L + + + Sbjct: 302 -AGFSMRPARRGGVIRMISSGVAAGFALF-ALSKIAAQFGETGTLPPVLAAWAPTGAGLC 359 Query: 351 L 351 L Sbjct: 360 L 360 >gi|291287413|ref|YP_003504229.1| permease YjgP/YjgQ family protein [Denitrovibrio acetiphilus DSM 12809] gi|290884573|gb|ADD68273.1| permease YjgP/YjgQ family protein [Denitrovibrio acetiphilus DSM 12809] Length = 349 Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 47/357 (13%), Positives = 120/357 (33%), Gaps = 8/357 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YIL+ I F + +F V + + +++ +L + ++++ Y +P+ Sbjct: 1 MKLLHKYILKEIYPIFFLGNVFFVLLLLLDKLIDLADLFFTKNVPAFLIIQTIVYYLPSF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + ++ ++E+ + G + P + + + + Sbjct: 61 LVITIPTSAMLAVMIGFGRLSSDSEVTAMRAAGAGKKFFTTPTIIFGLTAFLLGIMMSLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +K ++ + ++E + + K + N + + I+D Sbjct: 121 LMPAGSRNAIGNLSKIAKLVSINDMKEKELYDELPGIVFYAVKKDSNAKYRKMVIIDKAQ 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 A+ + L +G + + K S + F ++TL + ++ I + Sbjct: 181 HSVITANEAEILPSGNAGLLMNLKNGRIVTLNEDGKH-SKINFDTFTLNSPLIDAKDISV 239 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + + + Y+ EF KR++ +I + + Sbjct: 240 NSERIM-------QTKDLIENFQEAPLYKFEFSKRISMPFAAIIMSIFGMSLGIFFHRSG 292 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + I +++ +F+ P+ L LF + ++F K Sbjct: 293 RSLAIPITIAVVAVYNILFFAAENFAESGRIEPFLAAWLPNILFALIAVFFYRRAMK 349 >gi|299140954|ref|ZP_07034092.1| membrane protein [Prevotella oris C735] gi|298577920|gb|EFI49788.1| membrane protein [Prevotella oris C735] Length = 424 Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 52/363 (14%), Positives = 121/363 (33%), Gaps = 9/363 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPTV 60 K + YI++ +++ S I+ I+ V+ I + + S L I+ IP Sbjct: 65 KRLDWYIIKKFIGTYIYSIALIISISIVVDINENLAKFSEYHAPLKAIVFDYYMNFIPYF 124 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +P + + + N+E++ + G S L++P + IL+S F Sbjct: 125 ANLFSPLFVFIAVIFFTSKLAGNSEIIAMLAAGVSFKRLMRPYMITCILISAVSFYLSGY 184 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + + + + + N G + +D Sbjct: 185 VIPHSNVIRQDFESLYKNNKKNTAADNVMLQVGSGVIAYIQQYDNNTKRGYGFSLDKFQD 244 Query: 181 TQTHKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A I + + ++ + + + I + K T+ E + Sbjct: 245 KKLVSHMTATEIQYDTISDSKYHWTALNYKIRKFNGYREQIENGEKKDTTIMMEPTDLVY 304 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L + + + Y+ E+HKR+ I +I + A Sbjct: 305 SKGQQETFTNPELSDYISKQIDRGSSNVVQYQVEYHKRIAASFASFILTIIGLSL---SA 361 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF-CISSIFLLMIKK 356 R+ + I L++SFG + + N P++ ++ I ++ + Sbjct: 362 KKRKGGMGLYLGIGLALSFG-YIMLQTVSSTFAINANLPPVIAAWIPNFIFAVVAYFCYR 420 Query: 357 KYT 359 + Sbjct: 421 QAP 423 >gi|85706341|ref|ZP_01037435.1| permease, YjgP/YjgQ family protein [Roseovarius sp. 217] gi|85669114|gb|EAQ23981.1| permease, YjgP/YjgQ family protein [Roseovarius sp. 217] Length = 363 Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 42/357 (11%), Positives = 102/357 (28%), Gaps = 14/357 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 E Y R SFL + +V + +I ++ + + +L I +P Sbjct: 2 ILERYFGRRFFMSFLGVTVTLVVMLGLIDLMDELGDFPE--LAFGQVLGIVLLKLPEAYY 59 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + + + + R +EL+++ +G S + + +A+ + + N + Sbjct: 60 EIIPLVMILASVALFLRLARTSELVVLRASGRSALQGLLAPAAVALAIGLLGLAVGNPLV 119 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFR------LDDDLYIKISKYNPNNTLQGIFIV 176 L + + + + TL Sbjct: 120 AATSKRHHDLVNSYSGQASSDLAIASEGLWLRQSAAEGQTVIYAARASSDLGTLYAPSFY 179 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL--QTESAN 234 D + + + + ++ ++ + S + T+ Sbjct: 180 DFAPDGKPLRRISATSAQLEEGAWVLTEAKIWDLAQGVNPEASAREDAQMTVPSDLTQDR 239 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + L Y F L Q +F V LIS Sbjct: 240 ILDSFGSPEYVPIWEL-PKFIAQLEEAGFSARRYAIWFQSELAQPVFLVALVLISAAF-- 296 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 R + ++ + FG+ + ++ + +N +L + ++S+F+ Sbjct: 297 TMQHTRGANVGLSVLTAVLLGFGLHYIRNFAQ-ILGENGQIPILLAAWAPPVASLFI 352 >gi|53718606|ref|YP_107592.1| putative permease [Burkholderia pseudomallei K96243] gi|53725611|ref|YP_102446.1| permease [Burkholderia mallei ATCC 23344] gi|67640815|ref|ZP_00439609.1| permease YjgP/YjgQ family protein [Burkholderia mallei GB8 horse 4] gi|76811087|ref|YP_332585.1| permease [Burkholderia pseudomallei 1710b] gi|121601060|ref|YP_993649.1| hypothetical protein BMASAVP1_A2340 [Burkholderia mallei SAVP1] gi|124383987|ref|YP_001028889.1| hypothetical protein BMA10229_A2945 [Burkholderia mallei NCTC 10229] gi|126450363|ref|YP_001081198.1| hypothetical protein BMA10247_1654 [Burkholderia mallei NCTC 10247] gi|126453581|ref|YP_001065301.1| hypothetical protein BURPS1106A_1021 [Burkholderia pseudomallei 1106a] gi|134281291|ref|ZP_01768000.1| putative membrane protein [Burkholderia pseudomallei 305] gi|167003639|ref|ZP_02269425.1| putative membrane protein [Burkholderia mallei PRL-20] gi|167737554|ref|ZP_02410328.1| hypothetical protein Bpse14_05785 [Burkholderia pseudomallei 14] gi|167814688|ref|ZP_02446368.1| hypothetical protein Bpse9_06062 [Burkholderia pseudomallei 91] gi|167823142|ref|ZP_02454613.1| hypothetical protein Bpseu9_05663 [Burkholderia pseudomallei 9] gi|167844706|ref|ZP_02470214.1| hypothetical protein BpseB_05398 [Burkholderia pseudomallei B7210] gi|167893241|ref|ZP_02480643.1| hypothetical protein Bpse7_05715 [Burkholderia pseudomallei 7894] gi|167901698|ref|ZP_02488903.1| hypothetical protein BpseN_05425 [Burkholderia pseudomallei NCTC 13177] gi|167909937|ref|ZP_02497028.1| hypothetical protein Bpse112_05556 [Burkholderia pseudomallei 112] gi|167917974|ref|ZP_02505065.1| hypothetical protein BpseBC_05423 [Burkholderia pseudomallei BCC215] gi|217419643|ref|ZP_03451149.1| putative membrane protein [Burkholderia pseudomallei 576] gi|226194506|ref|ZP_03790104.1| putative membrane protein [Burkholderia pseudomallei Pakistan 9] gi|242317338|ref|ZP_04816354.1| putative membrane protein [Burkholderia pseudomallei 1106b] gi|254177868|ref|ZP_04884523.1| putative membrane protein [Burkholderia mallei ATCC 10399] gi|254190839|ref|ZP_04897346.1| putative membrane protein [Burkholderia pseudomallei Pasteur 52237] gi|254196871|ref|ZP_04903295.1| putative membrane protein [Burkholderia pseudomallei S13] gi|254199348|ref|ZP_04905714.1| putative membrane protein [Burkholderia mallei FMH] gi|254205664|ref|ZP_04912016.1| putative membrane protein [Burkholderia mallei JHU] gi|254258333|ref|ZP_04949387.1| putative membrane protein [Burkholderia pseudomallei 1710a] gi|254357822|ref|ZP_04974095.1| putative membrane protein [Burkholderia mallei 2002721280] gi|52209020|emb|CAH34960.1| putative permease protein [Burkholderia pseudomallei K96243] gi|52429034|gb|AAU49627.1| permease, putative [Burkholderia mallei ATCC 23344] gi|76580540|gb|ABA50015.1| permease, putative [Burkholderia pseudomallei 1710b] gi|121229870|gb|ABM52388.1| putative membrane protein [Burkholderia mallei SAVP1] gi|124292007|gb|ABN01276.1| putative membrane protein [Burkholderia mallei NCTC 10229] gi|126227223|gb|ABN90763.1| putative membrane protein [Burkholderia pseudomallei 1106a] gi|126243233|gb|ABO06326.1| putative membrane protein [Burkholderia mallei NCTC 10247] gi|134247597|gb|EBA47682.1| putative membrane protein [Burkholderia pseudomallei 305] gi|147748944|gb|EDK56018.1| putative membrane protein [Burkholderia mallei FMH] gi|147753107|gb|EDK60172.1| putative membrane protein [Burkholderia mallei JHU] gi|148026949|gb|EDK84970.1| putative membrane protein [Burkholderia mallei 2002721280] gi|157938514|gb|EDO94184.1| putative membrane protein [Burkholderia pseudomallei Pasteur 52237] gi|160698907|gb|EDP88877.1| putative membrane protein [Burkholderia mallei ATCC 10399] gi|169653614|gb|EDS86307.1| putative membrane protein [Burkholderia pseudomallei S13] gi|217396947|gb|EEC36963.1| putative membrane protein [Burkholderia pseudomallei 576] gi|225933591|gb|EEH29580.1| putative membrane protein [Burkholderia pseudomallei Pakistan 9] gi|238521610|gb|EEP85060.1| permease YjgP/YjgQ family protein [Burkholderia mallei GB8 horse 4] gi|242140577|gb|EES26979.1| putative membrane protein [Burkholderia pseudomallei 1106b] gi|243060865|gb|EES43051.1| putative membrane protein [Burkholderia mallei PRL-20] gi|254217022|gb|EET06406.1| putative membrane protein [Burkholderia pseudomallei 1710a] Length = 365 Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 52/365 (14%), Positives = 127/365 (34%), Gaps = 22/365 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ I +++ + +S + +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTIMLTSMMIRIVGYAASGEVNPKDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M+ + VLT +++E+++ +G S LIKP+ A + I + + Sbjct: 62 MILVGTLFVSILFVLTRWYKDSEMVVWLASGVSLTRLIKPIGVFATPIVILIAFFAFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P K + A+ Q S L F + + + + + + + Sbjct: 122 PWSNQQSKLIKARFQQRDEVSLLAPGQFRESAANHRVFFIEKMSPDQAKVQNVFVTTTEH 181 Query: 183 THKIY----YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + ++ + I+L +G + P + IM+F+ Y ++ +S + Sbjct: 182 GKVNVVVSQTGHTETMKNGDRFIVLENGRRYDGVPGQPNFKIMEFERYGVKIQSKQIVSQ 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 L NP N +EF R L + +++I A Sbjct: 242 PTTTGTSTPDLLRNPTNQNL-----------AEFAWRAGLPLIAINLMILAIPLAY---Q 287 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI----LYLFLFCISSIFLLMI 354 +R + + +++ I + + ++E+ + L++ + I ++ + Sbjct: 288 NPRRGRTVNLVMAVLIYLTYSNLLNVVQSQMERGKIAFGLGLIGLHVIVAGIVALLFWLR 347 Query: 355 KKKYT 359 + Sbjct: 348 VRNRP 352 >gi|238651117|ref|YP_002916975.1| hypothetical protein RPR_07620 [Rickettsia peacockii str. Rustic] gi|238625215|gb|ACR47921.1| hypothetical protein RPR_07620 [Rickettsia peacockii str. Rustic] Length = 369 Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 63/363 (17%), Positives = 156/363 (42%), Gaps = 11/363 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y ++ I ++ + I W+ QIL+ + L + + ++PT+ Sbjct: 10 MLLYRKYFIKNILPLLIVVTFSVTSIVWITQILKLLYLF-DKGIKVMDFFSLIVLVLPTL 68 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + + ++ +L+I+ +G + + L P L++A+++ + + + Sbjct: 69 LFILLPVITVITVIYIYNNLKVERQLIILQASGVNNVQLALPALYVALIVMLLAYYISSN 128 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P +K + S +EE F ++ D+ + I K + N + G+ I D+R+ Sbjct: 129 ILPLSHINLKSRLNFIKNNYISSMIEEKTFNKVTKDITVFIDKKSAGNIMNGVIIFDNRN 188 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI-SKDISIMKFKSYTLQTESANS---- 235 + +A SG++++ + I + R+ + +++ + F S ++ ++ N Sbjct: 189 ADNPSVVFASSGTLNIYDNSPIFELNKGIRQEYDVNGNLTQLTFDSLMIKLQNDNPLVSQ 248 Query: 236 -STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + +AN+ +S LL P + + +E H+R+ L+ + +++ Sbjct: 249 RTKHNKEANEYYISELLAPPHDLAITKKI---KLIAEAHQRIIWPLYNFVLPFVALAVFL 305 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + ++ + +F +L++ F + + +N +I Y L +I L + Sbjct: 306 RYPYSKKTTFMPVLFSALTVLLVTSIHF-ILQNFASKNLDFIFACYFNLVIALTIGLYLF 364 Query: 355 KKK 357 +K Sbjct: 365 VRK 367 >gi|301058948|ref|ZP_07199917.1| permease, YjgP/YjgQ family [delta proteobacterium NaphS2] gi|300446944|gb|EFK10740.1| permease, YjgP/YjgQ family [delta proteobacterium NaphS2] Length = 355 Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 54/355 (15%), Positives = 111/355 (31%), Gaps = 3/355 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK ++YI + FL+ L + + +I+ L +++ V + L + +P Sbjct: 1 MKLLDIYIGSRFLKCFLLVILILAVLFSLIEFLSQLDDVGKGMYRVENALLLVMLTLPKC 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L + + ELL + N G S + PV +L+ + I Sbjct: 61 LLDLLPISALLGGVISLGLLADHGELLAMQNAGISAPRVCAPVFATLMLVIMTSGIMAET 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + + S L + + F+ + YI + K G+ I + Sbjct: 121 IIPDM-EQMARKSRTRALYGAGVNVTRHGFWARRQNAYIHVHKILDEGVAAGVDIFEFDP 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 K + + L Q L I + + + L Sbjct: 180 RGRLKTFTHALSARILGHQQWSLTGIRQTVFKDRGVAIKGAASWTLEPFLSPDQVALLEL 239 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV- 299 + L+ + + YR ++L L + L S+ Sbjct: 240 SPYCLSTPDLI-GYIKALEDGGQNADPYRLALWRKLGVPLTTGVMVLFSVTFVLGANRKV 298 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R +I + + + + + NP +L + +++ L + Sbjct: 299 RAGSRITMASLIGLLLYFADQLIMHTGLLLNLNPPITAMLPVVFISGLAVWRLRL 353 >gi|310816138|ref|YP_003964102.1| putative permease [Ketogulonicigenium vulgare Y25] gi|308754873|gb|ADO42802.1| putative permease [Ketogulonicigenium vulgare Y25] Length = 360 Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 40/356 (11%), Positives = 108/356 (30%), Gaps = 15/356 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y ++FL + + +I++++++ + ++ +P L Sbjct: 2 ILHRYFALRYFKAFLGTAAGFFLMLVMIELIEQLRRFGGQ----SDFPALTLLNVPATLY 57 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 V P + + + R++E+++ G S + + + + +L+ + ++ N I Sbjct: 58 QVLPLIVIISALVLFLGLARSSEMVVTRAAGRSALIALIAPVLIVMLMGLLAVMAFNPIV 117 Query: 123 PKCRSTIKQLSAKA----QLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 A ++ D I+ + +P+ T + S Sbjct: 118 ASTSREYDNRIATITGSSRILQIGGDAIWLRQGDEDGQSVIRAAASDPDGTTLRGVTMLS 177 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK---DISIMKFKSYTLQTESANS 235 + + L + + +V + +I + Sbjct: 178 YTNDGIPARRIDAAAATLSGDHWQMQNAKVWPLNTGQNPEASATIHATLAVPSNLSPDEI 237 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 ++ L + L F V LI+ V Sbjct: 238 RNSFGNPASISVWEL-PAFIKRMEDAGFTAQRQIVHLQSELALPAFLVAMMLIAAVFTL- 295 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 R + + ++ ISF +++ + + + +N P+L ++ +++I L Sbjct: 296 -RHQRGGRTGMMVLFAVLISFSLYFIRN-LAQILGENGQLTPLLAAWVTPLAAIAL 349 >gi|237811281|ref|YP_002895732.1| permease YjgP/YjgQ family protein [Burkholderia pseudomallei MSHR346] gi|254181440|ref|ZP_04888037.1| putative membrane protein [Burkholderia pseudomallei 1655] gi|184211978|gb|EDU09021.1| putative membrane protein [Burkholderia pseudomallei 1655] gi|237503123|gb|ACQ95441.1| permease YjgP/YjgQ family protein [Burkholderia pseudomallei MSHR346] Length = 365 Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 53/365 (14%), Positives = 128/365 (35%), Gaps = 22/365 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ I +++ + +S + +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTIMLTSMMIRIVGYAASGEVNPKDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M+ + VLT +++E+++ +G S LIKP+ A + I + + Sbjct: 62 MILVGTLFVSILFVLTRWYKDSEMVVWLASGVSLTRLIKPIGVFATPIVILIAFFAFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P K + A+ Q S L F + + + + + + + Q Sbjct: 122 PWSNQQSKLIKARFQQRDEVSLLAPGQFRESAANHRVFFIEKMSPDQAKVQNVFVTTTEQ 181 Query: 183 THKIY----YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + ++ + I+L +G + P + IM+F+ Y ++ +S + Sbjct: 182 GKVNVVVSQTGHTETMKNGDRFIVLENGRRYDGVPGQPNFKIMEFERYGVKIQSKQIVSQ 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 L NP N +EF R L + +++I A Sbjct: 242 PTTTGTSTPDLLRNPTNQNL-----------AEFAWRAGLPLIAINLMILAIPLAY---Q 287 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI----LYLFLFCISSIFLLMI 354 +R + + +++ I + + ++E+ + L++ + I ++ + Sbjct: 288 NPRRGRTVNLVMAVLIYLTYSNLLNVVQSQMERGKIAFGLGLIGLHVIVAGIVALLFWLR 347 Query: 355 KKKYT 359 + Sbjct: 348 VRNRP 352 >gi|317503389|ref|ZP_07961433.1| conserved hypothetical protein [Prevotella salivae DSM 15606] gi|315665484|gb|EFV05107.1| conserved hypothetical protein [Prevotella salivae DSM 15606] Length = 385 Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 55/363 (15%), Positives = 121/363 (33%), Gaps = 9/363 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPTV 60 K + YI++ +++ S I+ I+ VI I + + S L I+ IP Sbjct: 26 KRLDWYIIKKFIGTYIYSIALIISISIVIDINENLAKFSEYHAPLKAIVFDYYMNFIPYF 85 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +P + + + N+E++ + G S L++P + IL+S+ F Sbjct: 86 ANLFSPLFVFIAVIFFTSKLAGNSEIIAMLAAGVSFKRLMRPYMISCILISVVSFYLSGY 145 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + + + + + N G + +D Sbjct: 146 VIPHSNVIRQNFESLYKNKKKTTAADNVMLNVGKGTIAYIQHYDNNTKRGYGFSLDKFQD 205 Query: 181 TQTHKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A I + + ++ + + + I + T+ E + Sbjct: 206 KKLVSHMTAMEIQYDTISDSKYHWTAQNYKIRKFNGYREQIENGAKRDTTILMEPNDLVY 265 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L + + + Y+ E+HKR+ I +I + A Sbjct: 266 SKGQQETFTNPELSDYISKQIDRGSSNVVQYQVEYHKRIAASFASFILTIIGLSL---SA 322 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF-CISSIFLLMIKK 356 R+ + I L++SFG + + N PI+ ++ I +I K Sbjct: 323 KKRKGGMGMYLGIGLALSFG-YIMLQTVSSTFAINANLPPIIAAWIPNIIFAIVAYFCYK 381 Query: 357 KYT 359 + Sbjct: 382 QAP 384 >gi|115379870|ref|ZP_01466933.1| permease YjgP/YjgQ, putative [Stigmatella aurantiaca DW4/3-1] gi|115363129|gb|EAU62301.1| permease YjgP/YjgQ, putative [Stigmatella aurantiaca DW4/3-1] Length = 342 Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 53/338 (15%), Positives = 124/338 (36%), Gaps = 11/338 (3%) Query: 30 IQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLII 89 +Q L ++ S +L + ++ YL P L P F M L ++ + EL + Sbjct: 1 MQFLLGTEVLLGSAVTLTDIGRLILYLTPHFLVKALPIAFLMAILLGLGRLSEDRELTAL 60 Query: 90 DNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENL 149 G S + L+ + + +LL+ + + +P +++K+L + ++ + Sbjct: 61 QALGISPVQLLLGPMAIGLLLAGLMALLAFTAQPWGLTSVKELVNEVIKKNVAGDVKSGV 120 Query: 150 FFRLDDDLYIKISKYNPNN-TLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQ----AIILN 204 F+ DL + + + + + D R+ + + AQ G + + ++L Sbjct: 121 FYEDLSDLTLYAERVSREGGEWTHVLLHDDREPSSPLLVLAQRGRVSMREGDEALRLVLE 180 Query: 205 DGEVHRKSPISKDISIMKFKSYTLQTE-----SANSSTIVLKANDQNLSFLLNPNPNNPN 259 +GEVHR + + D S+++F+ + + S+ + + + L+ Sbjct: 181 EGEVHRATRSTADYSLLRFEQGEISVGLGGSMNRKSNRFRSQKEEMSPGELIQA-AEEAE 239 Query: 260 YRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVF 319 + H RL + P+ F L+ A R + + + + Sbjct: 240 KSGGNPRPFLMAIHMRLGNAVAPLSFALLGTPLAIGRKQAGRAWGYLLTLSGYVLFYVLS 299 Query: 320 WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 F + ++ + L LF + + + + Sbjct: 300 RVFETLGNQEKLPMVLAAQLPNILFSVLGVVAMWRVSR 337 >gi|325983220|ref|YP_004295622.1| permease YjgP/YjgQ family protein [Nitrosomonas sp. AL212] gi|325532739|gb|ADZ27460.1| permease YjgP/YjgQ family protein [Nitrosomonas sp. AL212] Length = 358 Score = 97.8 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 61/368 (16%), Positives = 139/368 (37%), Gaps = 20/368 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI R I F + L ++ + + + + T + L+K+ Sbjct: 1 MKLIERYIAREIMLPFTVVILILIGLFASFSSARLLAGAVTETLGIAGLIKLVFLKTLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + L +N++ EL +I + G S ++ VL +AI + I + + Sbjct: 61 LEVLIPIALYISVIMGLGRLNKDQELNVIRSVGISGHRIVIAVLSVAIPVGIISGMLSSY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFF--RLDDDLYIKISKYNPNNTLQGIFIVDS 178 + P L A+A+ L + + F+ + +K + +Q IF Sbjct: 121 VRPWAYGESYILDAQAEAELNTNRFQAGRFYGSEKSGRVIYVRNKNEADKQMQNIFHYIK 180 Query: 179 RDTQTHKIYYAQSGSID----LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + + + Q+ I DR I L++G +++ + I+ +++FK ++ Sbjct: 181 KPDSSEIVIAKQAQQIKPTAEDDRPHIQLSEGTIYQLTSIASTDDVIQFKKMIYFIDNDF 240 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + KA + + +E R+++ L V+ LI++ Sbjct: 241 VTNYRRKAAATRTLW------------ESDVPRDIAELQWRISRPLATVLLALIALTFIH 288 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY--LFLFCISSIFLL 352 + +K + I + ++ G + + E + + L + + L Sbjct: 289 TAPRQDKTEKTYLIAALVFAAYYNLSGLAKTWVEQETIGSVPGVWWLELLMLLALITYAL 348 Query: 353 MIKKKYTK 360 ++++K ++ Sbjct: 349 IVRQKQSR 356 >gi|229587242|ref|YP_002845743.1| Putative permease [Rickettsia africae ESF-5] gi|228022292|gb|ACP54000.1| Putative permease [Rickettsia africae ESF-5] Length = 369 Score = 97.8 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 63/363 (17%), Positives = 156/363 (42%), Gaps = 11/363 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y ++ I ++ + I W+ QIL+ + L + + ++PT+ Sbjct: 10 MLLYRKYFIKNILPLLIVVTFSVTSIVWITQILKLLYLF-DKGIKVMDFFSLIVLVLPTL 68 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + + ++ +L+I+ +G + + L P L++A+++ + + + Sbjct: 69 LFILLPVIMVITVIYIYNNLKVERQLIILQTSGVNNVQLALPALYVALIVMLLAYYISSN 128 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P +K + S +EE F ++ D+ + I K + N + G+ I D+R+ Sbjct: 129 ILPLSHINLKSRLNFIKNNYISSMIEEKTFNKVTKDITVFIDKKSAGNIMNGVIIFDNRN 188 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI-SKDISIMKFKSYTLQTESANS---- 235 + +A SG++++ + I + R+ + +++ + F S ++ ++ N Sbjct: 189 ADNPSVVFAGSGTLNIYDNSPIFELNKGIRQEYDVNGNLTQLTFDSLIIKLQNDNPLVSQ 248 Query: 236 -STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + +AN+ +S LL P + + +E H+R+ L+ + +++ Sbjct: 249 RTKHNKEANEYYISELLAPPHDLAITKKI---KLIAEAHQRIIWPLYNFVLPFVALAVFL 305 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + ++ + +F +L++ F + + +N +I Y L +I L + Sbjct: 306 RYPYSKKTTFMPVLFSALTVLLVTSIHF-ILQNFASKNLDFIFACYFNLVIALTIGLYLF 364 Query: 355 KKK 357 +K Sbjct: 365 VRK 367 >gi|165933910|ref|YP_001650699.1| hypothetical protein RrIowa_1576 [Rickettsia rickettsii str. Iowa] gi|165908997|gb|ABY73293.1| hypothetical protein RrIowa_1576 [Rickettsia rickettsii str. Iowa] Length = 369 Score = 97.8 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 63/363 (17%), Positives = 156/363 (42%), Gaps = 11/363 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y ++ I ++ + I W+ QIL+ + L + + ++PT+ Sbjct: 10 MLLYRKYFIKNILPLLIVVTFSVTSIVWITQILKLLYLF-DKGIKVMDFFSLIVLVLPTL 68 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + + ++ +L+I+ +G + + L P L++A+++ + + + Sbjct: 69 LFILLPVIMVITVIYIYNNLKVERQLIILQASGVNNVQLALPALYVALIVMLLAYYISST 128 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P +K + S +EE F ++ D+ + I K + N + G+ I D+R+ Sbjct: 129 ILPLSHINLKSRLNFIKNNYISSMIEEKTFNKVTKDITVFIDKKSAGNIMNGVIIFDNRN 188 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI-SKDISIMKFKSYTLQTESANS---- 235 + +A SG++++ + I + R+ + +++ + F S ++ ++ N Sbjct: 189 ADNPSVVFAGSGTLNIYDNSPIFELNKGIRQEYDVNGNLTQLTFDSLMIKLQNDNPLVSQ 248 Query: 236 -STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + +AN+ +S LL P + + +E H+R+ L+ + +++ Sbjct: 249 RTKHNKEANEYYISELLAPPHDLAITKKI---KLIAEAHQRIIWPLYNFVLPFVALAVFL 305 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + ++ + +F +L++ F + + +N +I Y L +I L + Sbjct: 306 RYPYSKKTTFMPVLFSALTVLLVTSIHF-ILQNFASKNLDFIFACYFNLVIALTIGLYLF 364 Query: 355 KKK 357 +K Sbjct: 365 VRK 367 >gi|238897461|ref|YP_002923138.1| putative permease [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465216|gb|ACQ66990.1| putative permease [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 364 Score = 97.8 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 62/360 (17%), Positives = 130/360 (36%), Gaps = 19/360 (5%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 Y+++ I ++ + + FI + +++ ++ + + +++ + G + + Sbjct: 3 ITKYLIKEILKTQVAILFILSFIFFSQKLVTILDDIINHDIPAHLIFSLLGLGFAKMAEL 62 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 + P + +E++ + G + LIK L LA L S+F I+ P Sbjct: 63 ILPLSLFFALLMTYGKLYNESEIIAMYACGVGKTRLIKVALVLAALTSLFATINVFYFSP 122 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RDT 181 K++ + ++ S L + F D + + N IF+ T Sbjct: 123 WSVKHEKKIINEERVNPGLSALVKGQFQSSPDGKIVLFIQDIQNKKFHKIFLAQRESNHT 182 Query: 182 QTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 Q + A SG I Q + LN G + P D I F Y + + Sbjct: 183 QRPTVVVANSGYISAPAPGIQLLTLNHGMNYEGIPPLGDFRITYFNHYQAVISRKSVTKN 242 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 A ++S L N + R+E H RLT + VI +++ + Sbjct: 243 SNTAQQMSMSSLWEANDPDT----------RAELHWRLTLIVSVVIMAFMAV---PLSQV 289 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 ++ ++ + ++ + F S + N P+++L+L L +I + Sbjct: 290 NPRQGRVLSMLPAMLLYLIFFLLQSTLRSNAGNN-RLDPLIWLWLVNGLYTILAIILNIW 348 >gi|260891450|ref|ZP_05902713.1| permease, YjgP/YjgQ family [Leptotrichia hofstadii F0254] gi|260858833|gb|EEX73333.1| permease, YjgP/YjgQ family [Leptotrichia hofstadii F0254] Length = 358 Score = 97.4 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 49/360 (13%), Positives = 115/360 (31%), Gaps = 10/360 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI+ +SF++ + I + + + + + ++ Y P + Sbjct: 1 MNKLDKYIILNYVKSFILGMMMFFLIFLLAESISLTGWIMDGKLKGHDAIRYLRYGTPEI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + ++ M + E+ + +G S + + + L+S+ +F Sbjct: 61 ITNTAPLGVLLGSLLCISKMAKQLEIAAMKTSGISFARIALFPMIFSFLVSMGVFWLNYD 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI----V 176 K + + L + E+ F D + S++ NT I Sbjct: 121 ALGKSNTKKENLKSLKIDNKEPVKSEKKFIFVKIDKKTVLFSEHVNKNTGTMEHIEILKF 180 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + KIY + G I+ D + + + K + + + Sbjct: 181 EKGFKEISKIYTSPFGKINPKTNEWTFKD--LKEYDDKTNLMKPADTKKFKFIAKMEDVL 238 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 +KA + + L + L R EF+ R++ L + LI + Sbjct: 239 ASPVKAKNLTMPELREKVVYFTRVGADSLN-LRIEFYYRISFALSSFVMCLIGLSL---G 294 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + I +S+ I + + + + I I I + + + Sbjct: 295 SRYVRGGAALNIGLSVIIGYAYYGVSTILRSMAVSGAVPIYAACFIPLIIFLIVGIKLFR 354 >gi|237744435|ref|ZP_04574916.1| conserved hypothetical protein [Fusobacterium sp. 7_1] gi|229431664|gb|EEO41876.1| conserved hypothetical protein [Fusobacterium sp. 7_1] Length = 363 Score = 97.4 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 49/362 (13%), Positives = 115/362 (31%), Gaps = 11/362 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K ++Y+ + + FLM+ + + + + Q + I ++ +L L+P + Sbjct: 3 KKMDIYVSKYFIKFFLMNIIGFMGVFLLAQTFKIIKYINQGKLVGGEILDYILNLLPKMF 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + ++ M N E++ + +G + +++ L +A ++S+ +F N I Sbjct: 63 VETAPLSVLLAGLITISIMASNLEIVSLKTSGIRFLRIVRAPLIIAFVISLIVFFINNSI 122 Query: 122 EPKCRSTIKQLSA-----KAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 K + I +L T L +I++ + Sbjct: 123 YTKSLAKINFYRRGEVDESLKLPTTKENAFFINNADGYLYLMGEINRETGVAENIEVVKF 182 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 ++ ++ +I A+S D + I ++ ++ S+ Sbjct: 183 ETEISKPKEIITAKSAKFDTEENKWIFSNVNIYNVDTKETITKTEYKSDLYKDDPSSFIR 242 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L E Y SE K+ + I I + Sbjct: 243 ASAEDPRMLTIKEL-KKTIKEQKSIGEDTRIYLSELAKKYSFPFASFIVAFIGLSV--SS 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMI 354 VR + + I + +G + S + N P + ++ I + + Sbjct: 300 KYVRGGRTTMNLVICVIAGYGYYLV-SGAFEAMSLNGILNPFIASWIPNILYLIIGIYFM 358 Query: 355 KK 356 + Sbjct: 359 NR 360 >gi|237747611|ref|ZP_04578091.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] gi|229378973|gb|EEO29064.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] Length = 381 Score = 97.4 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 51/382 (13%), Positives = 117/382 (30%), Gaps = 28/382 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y L I RS L + + ++ ++ V L +L P Sbjct: 1 MKILQRYFLSQILRSVLFVLFAFLGLFAFFDLIGELSSVGRGGYQLQHVLIYILLGFPGY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + PF + T L N+E I+ + S + + + ++ +F F+ + Sbjct: 61 IYELMPFAVLIGTIYALAMFASNSEYTIMRVSSLSTLDACWMLAKVGLVFLVFTFLVGEV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRL-----------DDDLYIKISKYNPNNT 169 I P + ++ + ++ + K P+ T Sbjct: 121 ITPVSARVATEFRNNLIGRAVGDGFRTGMWSKDTIRKDGIDGPVIGSRFMNVKKMQPDGT 180 Query: 170 LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ 229 L+ I + + D + + L LN+ + + + +L Sbjct: 181 LEQIRLYEFNDNLELTKTVSAKNARYLGNHEWQLNEVVESHLTAANTKNKKFPDSAPSLN 240 Query: 230 TESANSSTIVLKAN-----------DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQ 278 T+ +S +V ++ ++ L + + +Y+ F K++ Sbjct: 241 TKKLDSLIMVSDITPDILSVISVDANKMSAYELAIYNQHLVENKQDATSYQMAFWKKIIY 300 Query: 279 WLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 + +++ A R IF + I + H N + + Sbjct: 301 PFSVFVMMALALPFAYL--HFRSGGVSLKIFSGIMIGVAFILINNLFSHVGLLNTWPPFL 358 Query: 339 LYLFL----FCISSIFLLMIKK 356 + F + I L +++ Sbjct: 359 TAVIPSALFFLSAVIALWWVER 380 >gi|299530037|ref|ZP_07043464.1| permease YjgP/YjgQ [Comamonas testosteroni S44] gi|298722017|gb|EFI62947.1| permease YjgP/YjgQ [Comamonas testosteroni S44] Length = 367 Score = 97.4 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 45/369 (12%), Positives = 122/369 (33%), Gaps = 14/369 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS--TESLNILLKISGYLIP 58 MK I R + ++ L L + + + ++ + V S + L IP Sbjct: 1 MKVLRNLIYREVIQAVLYVSLAFLALFFFFDLVDEMRWVGSGNAGYTATRALLFVTLSIP 60 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 L + P + V+ +++E I+ +G ++ +L L + + + Sbjct: 61 GHLYELMPIAVLIGAIFVMAKFAQSSEFTIMRTSGMGPWLALRTLLVLGMSFVVLTVLVG 120 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKI--SKYNPNNTLQGIFIV 176 + I P + ++L A+ ++ L + + + P + + Sbjct: 121 DYIAPAADNFSQKLRVVAKGQISRGATGAWLKEKQGNHSVAINVGAVKAPGDFVNVRIFE 180 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + AQS +D D++ L + + + + + ++ + ++ Sbjct: 181 FDSKGRIAAQINAQSAQVDEDKELWTLKGVQGSKVAQEGDVTKLSRISEASMNWPTKVTA 240 Query: 237 TIVLKA---NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 +V A D+ + L + + + Y EF +++ L ++ ++++ A Sbjct: 241 AMVSGALLKPDRMTTIALFQFVRHLQDNGQAAQKYEIEFWRKVFYPLSCLVMVVLALPFA 300 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCI-----SS 348 R +F + F + + ++ + + S Sbjct: 301 YL--HFRSGGITAYVFGGVMAGISFFLLNNVFGYIGTLQSWWPWLAAAAPGLLYTALSLS 358 Query: 349 IFLLMIKKK 357 F ++ ++ Sbjct: 359 AFGWLVLRR 367 >gi|77165379|ref|YP_343904.1| permease YjgP/YjgQ [Nitrosococcus oceani ATCC 19707] gi|254433097|ref|ZP_05046605.1| putative permease, YjgP/YjgQ family [Nitrosococcus oceani AFC27] gi|76883693|gb|ABA58374.1| permease YjgP/YjgQ [Nitrosococcus oceani ATCC 19707] gi|207089430|gb|EDZ66701.1| putative permease, YjgP/YjgQ family [Nitrosococcus oceani AFC27] Length = 381 Score = 97.4 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 46/347 (13%), Positives = 115/347 (33%), Gaps = 20/347 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + YIL+ + + L ++ I I+ ++ ++ + +L +SGY L Sbjct: 6 IVDRYILKELSLNATAITLVLLLIFGGIRFIRFLSQATEGKVPGEAILALSGYEAIGALV 65 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L M + E++ + G SR L++ VL + L+I + + Sbjct: 66 LLLPLASFLAVLLALGRMGADNEVIALFACGVSRGHLLRVVLTFGLALAIGVGGISLYLG 125 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIKISKYNPNNTLQGIFIVDSRDT 181 P + +L +A LA S L F + + + Sbjct: 126 PAASAEGYRLKQQALLAAETSGLVAGNFKEAQHGQRVFYAESLTEDGLGMKNVFIQVWEP 185 Query: 182 QTHKIYYAQSGSIDLD----RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A G + D + +IL DG + + I F+ + + + + Sbjct: 186 TQKTLLRAARGHLQTDEATGDKYLILEDGYRYELMGEEVGVRIFSFERHGILVKKGGAQE 245 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 ++ L +E R++ + ++ ++++ A Sbjct: 246 FRIRHQTLPTLTLWEM----------GAPKDIAEVQWRISMPIITLLLVMLAVPLA---R 292 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLF 342 ++ + + ++ + + + E P + + ++ Sbjct: 293 SGPRQGRYAGLVPAVLVYVIYSNMLGIARNWVEHEVIPASLGLWWIH 339 >gi|213855150|ref|ZP_03383390.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 356 Score = 97.4 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 43/348 (12%), Positives = 110/348 (31%), Gaps = 2/348 (0%) Query: 10 RCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCF 69 + I + +M+ +V ++ +I+ + ++ + +P + + P Sbjct: 9 KTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGNYDALGAGMYTLLSVPKDIQIFFPMAA 68 Query: 70 AMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTI 129 + L + + +EL+++ +G +R+ + V+ AI L + + P+ Sbjct: 69 LLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAPQGEQMA 128 Query: 130 KQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYA 189 + A+A + ++ L+ + ++ + + + YA Sbjct: 129 RNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELAGISIYAFNDQRRLQSVRYA 188 Query: 190 QSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLS 248 S D + + L+ + +P S ++ + L + ++S Sbjct: 189 ASAKFDPEHKVWRLSQVDESDLQNPKQITGSQTVSGTWKTNLTPDKLGVVALDPDALSIS 248 Query: 249 FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPI 308 L N + Y+ ++ Q L + L+++ Sbjct: 249 GLHN-YVKYLKSSGQDAGRYQFNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPMGVRVVT 307 Query: 309 FISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 IS F V + + P + L LM++K Sbjct: 308 GISFGFVFYVLDQIFGPLTLVYGIPPIVGALLPSASFFLISLWLMLRK 355 >gi|84516314|ref|ZP_01003674.1| permease, YjgP/YjgQ family [Loktanella vestfoldensis SKA53] gi|84510010|gb|EAQ06467.1| permease, YjgP/YjgQ family [Loktanella vestfoldensis SKA53] Length = 364 Score = 97.4 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 40/337 (11%), Positives = 99/337 (29%), Gaps = 10/337 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y R +FL I + ++++ +S+ L LL ++ IP + Sbjct: 2 ILHRYFARRFLMTFLGVLAVFFLIMLFLDLVEQSRRYASAEAGLRDLLTLTLLNIPRAIY 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + + + R++EL++ G S + I L + +L+ I N I Sbjct: 62 EILPLIMILAAIGLFLGLARSSELVVTRAAGRSALRAILAPLAVGLLIGIVAVAVLNPIV 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRL----DDDLYIKISKYNPNNTLQGIFIVDS 178 + + + + + + D+ I+ + N + T+ + Sbjct: 122 AATSKEYEARGGALRGNASALSIGSSGLWLRQGASDEQTVIRAAGANLDGTVLTDVTFLT 181 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI---SKDISIMKFKSYTLQTESANS 235 + S L A +L + +V Sbjct: 182 FTPDVGPARRVNAASAVLTDGAWVLRNAKVWTFGGTLTPEAGAVTQATMRIASTLTPDQI 241 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + + L + + + H + Q +F + +I Sbjct: 242 RDSFGTPSSIPIWQL-PAFIDRLREAGFSAQRHLVWLHSEIAQPVFLMAMVMIGASFTI- 299 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN 332 R + + ++ ++F +++ ++ E Sbjct: 300 -RHQRGGRTGLAVMTAILLAFVIYFIRNFAQVLGENG 335 >gi|126439084|ref|YP_001058064.1| hypothetical protein BURPS668_1014 [Burkholderia pseudomallei 668] gi|126218577|gb|ABN82083.1| putative membrane protein [Burkholderia pseudomallei 668] Length = 365 Score = 97.4 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 52/365 (14%), Positives = 128/365 (35%), Gaps = 22/365 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ I +++ + +S + +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTIMLTSMMIRIVGYAASGEVNPKDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M+ + VLT +++E+++ +G S LIKP+ A + I + + Sbjct: 62 MILVGTLFVSILFVLTRWYKDSEMVVWLASGVSLTRLIKPIGVFATPIVILIAFFAFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P K + A+ Q S L F + + + ++ + + + Sbjct: 122 PWSNQQSKLIKARFQQRDEVSLLAPGQFRESAANHRVFFIEKMSSDQAKVQNVFVTTTEH 181 Query: 183 THKIY----YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + ++ + I+L +G + P + IM+F+ Y ++ +S + Sbjct: 182 GKVNVVVSQTGHTETMKNGDRFIVLENGRRYDGVPGQPNFKIMEFERYGVKIQSKQIVSQ 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 L NP N +EF R L + +++I A Sbjct: 242 PTTTGTSTPDLLRNPTNQNL-----------AEFAWRAGLPLIAINLMILAIPLAY---Q 287 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI----LYLFLFCISSIFLLMI 354 +R + + +++ I + + ++E+ + L++ + I ++ + Sbjct: 288 NPRRGRTVNLVMAVLIYLTYSNLLNVVQSQMERGKIAFGLGLIGLHVIVAGIVALLFWLR 347 Query: 355 KKKYT 359 + Sbjct: 348 VRNRP 352 >gi|253997951|ref|YP_003050014.1| permease [Methylovorus sp. SIP3-4] gi|253984630|gb|ACT49487.1| permease YjgP/YjgQ family protein [Methylovorus sp. SIP3-4] Length = 366 Score = 97.4 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 41/362 (11%), Positives = 118/362 (32%), Gaps = 15/362 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ +L+ + + + + L + I ++ I + + + + + + + G+ + LP Sbjct: 2 LFKRSLLQELVGTAIGAFLVLFGIVIAQRVAYYIGVAAKGSLASDAINTLLGFSMLKFLP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M+ + LT +R++E+++ ++G I+PVL AI + + + + Sbjct: 62 MILSLTIFLAVLLTLTRWHRDSEMVVWFSSGMGLAGWIRPVLTFAIPVVAVIAVLSLFVT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + + + + + + +F + + + I Sbjct: 122 PWATNKGSEFRDQLKSRDELASISPGVFKESRNADRVFFVESFDELGNVVKNIFVQSVQH 181 Query: 183 THKIYYA----QSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 D +++ G + P + + S +F+ Y+++ E Sbjct: 182 QRLGVVVASQGHRTVADNGDNFLVMEHGRRYEGKPNTAEFSTTEFERYSIRIEPNEVKEE 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 LL +E RL + + L++I + Sbjct: 242 PPGTAALGSVELL----------KNHNPANNAELQWRLAIPISAFLLVLLAIPLSFVDNR 291 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + + + I + + + + NP + + + +F + + ++ Sbjct: 292 SGRSANMMLALLIYIIYNNMLSIVQAWLTQGKLNPV-VGLWPVHVFFLLLTIWMFYRRLL 350 Query: 359 TK 360 + Sbjct: 351 QR 352 >gi|209545529|ref|YP_002277758.1| permease YjgP/YjgQ family protein [Gluconacetobacter diazotrophicus PAl 5] gi|209533206|gb|ACI53143.1| permease YjgP/YjgQ family protein [Gluconacetobacter diazotrophicus PAl 5] Length = 402 Score = 97.4 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 51/362 (14%), Positives = 126/362 (34%), Gaps = 11/362 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + + Y++ + FL+S ++ + ++L +N+++S +L I + L+P L Sbjct: 18 TLDRYLIGQMLPPFLLSLGVVMTALLLERLLTLLNVLASDGGTLKIFAGLLADLVPHYLG 77 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + +V+ M++N E+ + +G S + + +P + + +L + F I+ Sbjct: 78 LALPAAICVSVFSVVRRMSQNNEIDALMASGVSLLRIARPFVVMGAVLGLVGFSLYGFIQ 137 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P R +Q A A +L+ +F D L + + T + + Sbjct: 138 PYARYDFRQALYIASHAGWTPHLQARMFAAPSDTLMLTADQVQGAGTRLRRVFIRDKSAG 197 Query: 183 THKIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS---- 236 + A SG + D + L+ + + + T + +S Sbjct: 198 LERDITADSGRLLMTDDGTTVRLDLAHGVIVTDRNDGRPTLTTFDTTTRFFQTSSKAHAF 257 Query: 237 -TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + + L + + +E H RL + + +++ A Sbjct: 258 RNRGNDERELTVLELRHGIRHRDLAIRRTH--LVAELHFRLARAMAIPFIPILACALA-- 313 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 RQR ++S+ + ++ +++ + +I Sbjct: 314 GMAKRQRHNTGLAIAAISLVGFDHALQLGLSLVASRSMSPWLVIWGPFAVFGFACVWLIL 373 Query: 356 KK 357 ++ Sbjct: 374 RR 375 >gi|262373934|ref|ZP_06067211.1| permease [Acinetobacter junii SH205] gi|262310945|gb|EEY92032.1| permease [Acinetobacter junii SH205] Length = 366 Score = 97.4 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 50/354 (14%), Positives = 111/354 (31%), Gaps = 14/354 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + + L+ + I Q+++ + +LL I Y +P L Sbjct: 2 IIRRYLVKQVVSTSLVVTALLTLIIMGGQLIKIFGRAAQGRLDAGVLLSIIAYRLPEFLT 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + V + + E+ +++ +G SR L K +L + + + Sbjct: 62 LILPLGFFIGLMLVFGRLYVDHEMAVLNGSGVSRNQLAKLLLPMTFVYLLVQSFLMFWGS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + L + F + F S L+ IF + + Sbjct: 122 SSGIRAYESLMQTQAVRAGFDLVRPKEFISSGPYTIYAGSLSEDRKNLKDIFYYQKAERE 181 Query: 183 THKIYYAQSGSIDLDRQAI------ILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + A L G + P + +F+SY L+ E+ Sbjct: 182 DKPDVMILAKEATRVEMANDTANVVDLVQGRRYEIYPNQPRYTQAEFQSYRLRLENDKDI 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + RSE R+ ++ L+++ ++ Sbjct: 242 KFESDDVEALSMSKLW--------QKRDDSVVRSELGWRIFGPFVILVALLLAVALSEVS 293 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 + ++ P + + I K E + + P++ L ++IF Sbjct: 294 PRQGRYYRLIPAIFIFASLIVLMIAIKTRISKEELDIWAYPVVLLVYAIAAAIF 347 >gi|110643218|ref|YP_670948.1| putative permease [Escherichia coli 536] gi|47155053|emb|CAE85252.1| putative permease [Escherichia coli] gi|110344810|gb|ABG71047.1| putative permease [Escherichia coli 536] Length = 359 Score = 97.4 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 49/360 (13%), Positives = 124/360 (34%), Gaps = 3/360 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSHYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + IL+ + + + ++ S + + + Sbjct: 181 DLSLESYIFARSASIEDDKTWILHGVNHKKWLNGKETLETSDNLAWQSAFTSMDLEELSM 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + YR ++L Q + + L+++ Sbjct: 241 PGNTFSVRQL-NHYIHYLQETGQPSSDYRLALWEKLGQPILTLAMILLAVPFTFSAPRSP 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + + + + + + +++ P+ L L + L + Y + Sbjct: 300 --GMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLMALSLVYWYDR 357 >gi|167618242|ref|ZP_02386873.1| permease, putative [Burkholderia thailandensis Bt4] Length = 365 Score = 97.4 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 51/364 (14%), Positives = 126/364 (34%), Gaps = 20/364 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ I +++ + +S + +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTIMLTSMMIRIVGYAASGEVNPKDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M+ + VLT +++E+++ +G S LIKP+ A + I + + Sbjct: 62 MILVGTLFVSILFVLTRWYKDSEMVVWLASGVSLTRLIKPIGVFATPIVILIAFFAFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P K + A+ Q S L F + + + + + + + Sbjct: 122 PWSNQQSKLIKARFQQRDEVSLLAPGQFRESAANHRVFFIEKMSPDQAKVQNVFVTTTEH 181 Query: 183 THKIY----YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + ++ + I+L +G + P + IM+F+ Y ++ ++ + Sbjct: 182 GKVNVVVSQTGHTETMKNGDRFIVLENGRRYDGVPGQPNFKIMEFERYGVKIQNKQVVSQ 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 L NP N +EF R L + +++I A Sbjct: 242 PTTTGTSTPDLLRNPTNQNL-----------AEFAWRAGLPLIAINLMILAIPLAY---Q 287 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMIKK 356 +R + + +++ I + + ++ + P+ + ++ L + L + Sbjct: 288 NPRRGRTVNLVMAVLIYLTYSNLLNVVQSQMERGKIPFGLGLIGLHAIIAGVVAFLFWLR 347 Query: 357 KYTK 360 + Sbjct: 348 VRNR 351 >gi|294673581|ref|YP_003574197.1| hypothetical protein PRU_0844 [Prevotella ruminicola 23] gi|294471872|gb|ADE81261.1| putative membrane protein [Prevotella ruminicola 23] Length = 393 Score = 97.4 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 48/363 (13%), Positives = 114/363 (31%), Gaps = 8/363 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 +K + YI+ +++ S + I+ I+ V + + + S+ L I+ +P Sbjct: 33 LKRLDRYIIAKFIGTYIFSIILIISISIVFDVNENLAKFSTYNAPLKAIVFDYYANFVPY 92 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E++ + G S L++P + A L++ F Sbjct: 93 FANLFSPLFVFIAVIFFTSKLAGNSEIIAMLAAGVSFKRLLRPYMISAALIAAVNFYLGG 152 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + PK AK + + + T G + Sbjct: 153 YVIPKGNQVKMDFEAKYKNKERNLSASNVQLMVQPGVIAYLQQYDDVTKTGYGFSLDKFE 212 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK---FKSYTLQTESANSS 236 + + A D + + ++ + ++ +Q E + Sbjct: 213 NKKLVSHMTASVIRYDSISDSRYHWKAQSYKIRTLKGLREEIESGAVIDTLIQMEPMDLV 272 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + L + + Y E+HKR+ I +I + Sbjct: 273 FSKGQQETLTSTELSDYISKQVERGSVNVVQYEVEYHKRIATSFASFILTMIGVSL---S 329 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + R+ + I L++SFG + I N +L ++ + + + Sbjct: 330 SRKRKGGMGMYLGIGLALSFG-YILLQTISATFAINADTPALLAAWIPNLLYVIIAYFCY 388 Query: 357 KYT 359 + Sbjct: 389 RQA 391 >gi|157804262|ref|YP_001492811.1| hypothetical protein A1E_05575 [Rickettsia canadensis str. McKiel] gi|157785525|gb|ABV74026.1| hypothetical protein A1E_05575 [Rickettsia canadensis str. McKiel] Length = 360 Score = 97.4 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 61/363 (16%), Positives = 156/363 (42%), Gaps = 11/363 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M +E Y ++ I ++ + I W+ Q+L+ + L + + ++PT+ Sbjct: 1 MLLYEKYFIKNILPLLIVVTFSVTSIVWITQVLKLLYLF-DKGIKVMDFFSLIVLVLPTL 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + + ++ +++I+ +G + L P L++A+++ + + + Sbjct: 60 LFILLPVITVIAVIYIYNNLKVERQIIILQASGVHNVQLALPALYVALIVMLLAYYISST 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P +K + + S +EE F ++ D+ + I K + N + G+ I D+R+ Sbjct: 120 IMPLSHINLKSRLSFIKNNYISSMIEEKTFNKVTKDITVFIDKKSAGNIMNGVIIFDNRN 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI-SKDISIMKFKSYTLQTES-----AN 234 + +A SG++++ + I + R+ + +++ + F S ++ ++ Sbjct: 180 ADNLSVVFADSGTLNIYDNSPIFELNKGLRQEHDINGNLTQLTFNSLMIKLQNDNPLIPQ 239 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + +AN+ +S LL P + + +E H+R+ L+ + +++ Sbjct: 240 RTKHNKEANEYYISELLAPPHDLAVTKKI---KLIAEAHQRIIWPLYNFVLPFLALAVFL 296 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + ++ + +F +L++ F + + +N +I Y L +I L + Sbjct: 297 RYPYSKKTTFMPVLFSALTVLLVTSIHF-ILQNFASKNLNFIFACYSNLVIALTIGLYLF 355 Query: 355 KKK 357 +K Sbjct: 356 VRK 358 >gi|264678996|ref|YP_003278903.1| permease YjgP/YjgQ [Comamonas testosteroni CNB-2] gi|262209509|gb|ACY33607.1| permease YjgP/YjgQ [Comamonas testosteroni CNB-2] Length = 369 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 51/365 (13%), Positives = 130/365 (35%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ I + + RSF + + ++ + + +++ + + S + ++ + G+ + LP Sbjct: 2 LFDSSIRKELARSFGATAVVLITVVMTMMLIRTLGQAYKGSVSPSDVMLVMGFTVLGQLP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + + L+ M R++E++I G +L+KP+L A + + + + Sbjct: 62 TILGLSLFVAIVGSLSRMYRDSEMVIWFAAGQGLASLLKPLLRFAWPVILITAVLALGVL 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P I+Q+ + Q + F + + + + + Sbjct: 122 PWSYQQIEQIKTQFQQRSDLDRIAPGEFQESAGGTRVFFVDKDSPSDMAASNVFVVSRDP 181 Query: 183 THKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + G+ + ++ +IL DG+ + I +FK Y +Q ++ N I Sbjct: 182 GKESVTSAKGAHLAVIKGQRMVILEDGQRMETRSDDGSVRITEFKEYGVQVDNDNPVAIE 241 Query: 240 LK-ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 A L+ + RS RL + F ++ + ++ Sbjct: 242 EMAARSMPTKDLI----------GKDEPIARSVLAWRLGLPFAALNFVILGLAI---SSV 288 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY----YIPILYLFLFCISSIFLLMI 354 + + I+L + + + N + +L+ + +S + LL Sbjct: 289 NPRAGNSSSLMIALFAFIVYYNLMTLGESWVSANKIGMWGILGLLHGSILIVSVLVLLAR 348 Query: 355 KKKYT 359 +++ Sbjct: 349 HFRWS 353 >gi|157826432|ref|YP_001495496.1| putative permeases [Rickettsia bellii OSU 85-389] gi|157801736|gb|ABV78459.1| Putative permeases [Rickettsia bellii OSU 85-389] Length = 360 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 70/364 (19%), Positives = 160/364 (43%), Gaps = 13/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y ++ I ++ + + W+ Q+L+ + L + L + ++PT+ Sbjct: 1 MLLYRKYFIKNILPLLIVITFSMTSLVWITQVLKLLYLF-DKGIKVMDFLSLIILVLPTL 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + + ++ +L+I+ +G + L P L++A+++++ + + Sbjct: 60 LFILLPIITVITIIYIYNNLKIERQLIILQTSGVGNLQLALPALYVALIVALLAYYISST 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +K + + S +EE F ++ D+ + I K + N ++G+ I D+R+ Sbjct: 120 VMPLSHINLKSRLSFIKNNYISSMIEEKTFNKITKDITVYIDKKSTGNVMKGVIIFDNRN 179 Query: 181 TQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--- 235 T + +A SG +I + L+ G + +I+ + F S ++ ++ N Sbjct: 180 TDNPSVVFANSGILNIYENDPIFELSKGSRQEYDI-NGNITQLTFDSLMIKLQNDNPLIS 238 Query: 236 --STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 +T +AN+ + LL P + P +E H+R+ L+ + +++ Sbjct: 239 QRTTHNKEANEYYIEELLEPPVD---LNPMKKIKLIAEAHQRIIWPLYNFVLPFLALAVF 295 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 K ++ + +F +LS+ F + + +N +I YL +F I SI L + Sbjct: 296 LKYPYSKKTTFMPILFAALSVLIATSAHF-TLQNFASKNLAFITACYLNIFFILSIGLYL 354 Query: 354 IKKK 357 +K Sbjct: 355 FIRK 358 >gi|110833358|ref|YP_692217.1| hypothetical protein ABO_0497 [Alcanivorax borkumensis SK2] gi|110646469|emb|CAL15945.1| membrane protein, putative [Alcanivorax borkumensis SK2] Length = 353 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 52/357 (14%), Positives = 99/357 (27%), Gaps = 5/357 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y R + L IV + + + + + L+ P Sbjct: 1 MKLLKRYFWRAVMIPTLAILFIIVGLDCLFGFIYELE-FLRGNYQVMEALQFILTTTPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 P + T L+ + + EL +I G S + + VL ++L I Sbjct: 60 FYEYMPMAILLGTLIGLSLLANSGELSVIRAAGVSTLKVSWLVLRPVLVLIILSIPLGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A+ + + R + + S Sbjct: 120 LTPYSEQVAQSNRSMAEGGGEALRSKYGYWHREGPEFIHINAVQPNGVLHGLTRYRFSDG 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y ++ L + R + + + S +VL Sbjct: 180 QKLTETQYVNRAIYQ--GESWSLEGIQGTRLFADHVETYQKDQGEWQTELTPQLLSIVVL 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K ++ L LL + Y F ++L L + LI+I Sbjct: 238 KPDNLALVKLL-EYTRYLKRQGLETADYMLSFWQKLFMPLATIGMVLIAISFVFGPLREV 296 Query: 301 QRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 I + F F + +P IL L + I+LL + Sbjct: 297 TMGLRLTAGIVAGLIFHYGQQFFGQLSLVFHTDPLLAAILPPSLCLVLGIWLLQRVR 353 >gi|293610040|ref|ZP_06692341.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292827272|gb|EFF85636.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|325124205|gb|ADY83728.1| hypothetical protein BDGL_003142 [Acinetobacter calcoaceticus PHEA-2] Length = 356 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 43/356 (12%), Positives = 114/356 (32%), Gaps = 4/356 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y+ + + + + + + + L + + + L + P L Sbjct: 5 RIVAKYVTKTTALAMFGTTVVLSILQVLFTYLGELGEL-KPDYNAWQALVYVLWGAPRYL 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L S+ ++EL+++ + G S ++ V+ A+LL I F + Sbjct: 64 YEILPISALIGAVIGLGSLATSSELIVMRSVGVSLWRIVGWVMRSALLLIILSFALSEWV 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + + +A + +Q + ++ Sbjct: 124 IPYTNEKAQSVKSHRSVAALGEVKGYWSREGQRFIYIDYANSQGNLRDIQ--VVDFDQNY 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + AQ G + Q + ++ + + + + +S L + + L Sbjct: 182 YLQSLINAQQGQFIKNGQWALKKAEQMDILAAGNAIKTDHEEQSLALALQPKYVHMVTLD 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 D + S L++ Y ++ +TY+ F +++ + L++ + Sbjct: 242 PEDLSPSQLISFMRYMDEY-SQVPKTYQLAFWQKVASPFSLIALVLVACSFIFGPLRQQS 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I + + +SF F + +L L + L+ + + Sbjct: 301 MGFRLVIALFIGLSFYYLQDFLGYASLVYSPSPAWFVLVPILLMFGAGSYLLYRAR 356 >gi|121605071|ref|YP_982400.1| permease [Polaromonas naphthalenivorans CJ2] gi|120594040|gb|ABM37479.1| permease YjgP/YjgQ family protein [Polaromonas naphthalenivorans CJ2] Length = 379 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 50/380 (13%), Positives = 126/380 (33%), Gaps = 24/380 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSST------ESLNILLKISG 54 MK+ I + S + + + + + ++ + + + + L Sbjct: 1 MKTIRRLIYGEVLGSIALVAMGFLALFFFFDLVDELQYLGKNNGAGDSIYQIRHALLYVA 60 Query: 55 YLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFL 114 LIP L + P + + V++ + +++E I+ +G +K +L+L Sbjct: 61 LLIPNHLYELLPISVLIGSIFVMSRLAQSSEYTILRTSGLGPWRALKLLLWLGAFFVALS 120 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEEN-LFFRLDDDLYIKISKYNPNNTLQGI 173 F+ + I P + + A+ Q +T ++ + + +S+ +PNN + G+ Sbjct: 121 FLVGDYIAPASERAAQLMKARYQNKITVGQTGAWLKEKQVSSNFIVNVSELSPNNEMHGV 180 Query: 174 FIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-------------DISI 220 I + + A L + + + Sbjct: 181 RIYEFNHQGLIVSTTEAPVAAFSLNTAWQLRNATRTEFDVTTSAGGVNAPAQQAKVKRTD 240 Query: 221 MKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWL 280 + + + + S +L+ + L N + + + Y EF K++ L Sbjct: 241 VASYRWPTEISTEMVSVALLRPDRMATLDLFN-YIRHLEANGQTSQRYEIEFWKKVFYPL 299 Query: 281 FPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPIL 339 ++ ++++ A + + ISF + F YI + P+ Sbjct: 300 SCLVMVMLALPFAYLHFRSGSITSYVFAGVMIGISFFLLNNVFGYIGNLRNWQPWLAAAT 359 Query: 340 YLFLFCIS--SIFLLMIKKK 357 L+ + F ++ ++ Sbjct: 360 PGLLYMAISMAAFGWLVLRR 379 >gi|258544323|ref|ZP_05704557.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826] gi|258520403|gb|EEV89262.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826] Length = 352 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 55/361 (15%), Positives = 116/361 (32%), Gaps = 16/361 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y++R FL + L ++ I ++ + ++ +L+ + + G Sbjct: 1 MPILYRYLIRETLAVFLATNLILLAILLSFRLSTLLAAAAAGNMALSAVWMLIGLQAVRF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P F + L + R+ E+ G + + +L AI + + L Sbjct: 61 LVILMPLAFVLAAVMTLGRLYRDHEISAALACGIAPRHQTRALLACAIPIGLLLLTLSMS 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ + L +AQ N + RLDD + L+ FI Sbjct: 121 VLPRVYRGQEALRQQAQQEAGMILFTPNTYRRLDDGTIVHTGSI-EGGQLRDFFIARDEP 179 Query: 181 TQTHKIYYAQSGSIDLDRQAI--ILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 H + A +G + D Q +L+DG + F ++T+ Sbjct: 180 DGGHSLILAANGEMQGDEQQRHLLLHDGRRLAWNADHDPAHTTLFTYQHADLRLPGANTL 239 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 ++++ N P + SE+ R + V + ++ Sbjct: 240 AASSDNR--------LRNLPTSELGTSPEHLSEWQSR-SNP--AVALFIYALALPLLARS 288 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIE--QNPYYIPILYLFLFCISSIFLLMIKK 356 ++ + I + I I Q P +L ++ I + + Sbjct: 289 QPRQGRYQKIVPAFIAFALYINLLDLITIAIRKQQIPPLPGSYWLHGAVLALILICWQRS 348 Query: 357 K 357 + Sbjct: 349 R 349 >gi|296115281|ref|ZP_06833921.1| putative permease [Gluconacetobacter hansenii ATCC 23769] gi|295978184|gb|EFG84922.1| putative permease [Gluconacetobacter hansenii ATCC 23769] Length = 406 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 59/364 (16%), Positives = 135/364 (37%), Gaps = 13/364 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + + Y+L+ + F +S ++ + ++L NL++S+ S+ + + L+P L Sbjct: 12 TLDHYLLQQVTPPFSISLGVVMAALLLERLLALFNLLASNGSSMKTFVSLLTDLVPHYLG 71 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + +V+ M++N E+ + +G S + +P + + +L + F I+ Sbjct: 72 LALPAAMCVSVFSVIRRMSQNHEIDALMASGVSMFRIARPFIVVGAILGVLSFSLYGFIQ 131 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSRDT 181 P R + A + +L+ ++F DL + K + + + +FI D+ + Sbjct: 132 PYARYNYRSALYFASHSGWAPHLQSHMFAAPSHDLMLTAEKVDDAGSRMFKVFIRDNSNH 191 Query: 182 QTHKIYYAQSGSID----LDRQAIILNDGEVHRKSPISK------DISIMKFKSYTLQTE 231 + A+ G + D+ + L DG + D + F + + Sbjct: 192 DLTRYITARKGYLYIPNDEDKIRLDLIDGTIITDRHDKSPSVIHFDHTTELFSPHAQLDK 251 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 T + L L + +E H RL + L L++ Sbjct: 252 LKAYRTRGQTERELTLPELYRGIRHGM--PGIKHSYLVAELHFRLARTLAIPFIPLLACA 309 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 A ++ + I+L ++ + +P + L +F I ++ Sbjct: 310 LAVMAKRQKRSLGLPIAAIALVGFDHTLQMGLSLVANVHMSPLLVIWLPTLVFGIGCVWA 369 Query: 352 LMIK 355 L+ + Sbjct: 370 LIWR 373 >gi|157826358|ref|YP_001494078.1| hypothetical protein A1C_06735 [Rickettsia akari str. Hartford] gi|157800316|gb|ABV75570.1| hypothetical protein A1C_06735 [Rickettsia akari str. Hartford] Length = 360 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 62/363 (17%), Positives = 150/363 (41%), Gaps = 11/363 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y ++ I ++ + I W+ QIL+ + L + + ++PT+ Sbjct: 1 MLLYRKYFIKNILPLLIVVTFSLTSIVWITQILKLLYLF-DKGIKVMDFFNLIVLVLPTL 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + + ++ +L+I+ +G + + L P L++A+++ + + + Sbjct: 60 LFILLPVITVIAIIYIYNNLKVERQLIILQASGVNNVQLALPALYVALIVMLLAYYISST 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P +K + S +EE F ++ D+ + I K + N + G+ I D+R+ Sbjct: 120 IMPLSHINLKSHLNFIKNNYISSMIEEKTFNKVTKDITVFIDKKSAGNIMNGVIIFDNRN 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI-SKDISIMKFKSYTLQTESA-----N 234 + +A SG++++ I + R+ + +++ + F S ++ ++ Sbjct: 180 ADNPSVVFAGSGTLNIYDNNPIFELNKGLRQEYDVNGNLTQLTFDSLMIKLQNDNHLASQ 239 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + +AN+ +S LL P + + +E H+R+ L+ + +++ Sbjct: 240 RTQHNKEANEYYISELLAPTHDLVITKKI---KLIAEAHQRIIWPLYNFVLPFLALAVFL 296 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + ++ P+ S V + + +N +I Y L +I L + Sbjct: 297 RYPYSKKT-TFMPVLFSTLTVLLVTSIHFILQNFASKNLDFIFACYSNLVIALTIGLYLF 355 Query: 355 KKK 357 +K Sbjct: 356 VRK 358 >gi|254468723|ref|ZP_05082129.1| permease YjgP/YjgQ [beta proteobacterium KB13] gi|207087533|gb|EDZ64816.1| permease YjgP/YjgQ [beta proteobacterium KB13] Length = 355 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 47/358 (13%), Positives = 124/358 (34%), Gaps = 8/358 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 YI + + + +VF+ LQ I ++S L+ ++ +P L Sbjct: 2 KLAKYINFEFFINISLVAIGLVFLFAFFDFLQEIGNLNSGKYDLSKIIVFITLSMPGHLY 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + + ++ N+EL+++ +G S + + ++ +++ + F+ N+I Sbjct: 62 EIIPLSCLIGAMFTVGQLSGNSELVVMRTSGMSILQIASSLIIVSLFFGVLTFMVGNLIT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +Q+ + + + ++ + ++ + + D Sbjct: 122 PVSEKNAQQIKISSTDGSVTTDFKSGVWMKDGNNFVNIENVLPDASLRNIHIYEFDNDFS 181 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 I A+ G + L + D+ + ++ + + +++ Sbjct: 182 LRSIVDAEKGRY--ENGIWELEKIKQSFILDEGFDVKTLPSGTWKSMIKPEMMNVLLISP 239 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++ L N N + Y F +++ Q + P+I L ++ R Sbjct: 240 DRMSIFDL-NDFINYLKKNNQKTSRYEVSFWEKIIQPVMPIIMILFAVPFGFF--QERSG 296 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQN---PYYIPILYLFLFCISSIFLLMIKKK 357 K +F+ + S + H N P I+ + +I+L+ ++ Sbjct: 297 GKYLKMFLGIIFGIIYQIMNSMMRHIGVLNDWEPIITAIIPSIVILGIAIYLMFYFER 354 >gi|307543949|ref|YP_003896428.1| permease [Halomonas elongata DSM 2581] gi|307215973|emb|CBV41243.1| K07091 [Halomonas elongata DSM 2581] Length = 354 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 38/354 (10%), Positives = 104/354 (29%), Gaps = 5/354 (1%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + YI R + + L+ + ++ + VI + + V + +P Sbjct: 5 RLDRYIARNVLGAILVVQVVLLGLDLVITYINDLGDV-EGDYGALQVFFYLVMRLPWRFY 63 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + L M + EL ++ G S ++ V+ IL+ + + Sbjct: 64 QYAPVGVLIGALIGLGGMASSNELTVMRAAGRSLARILWGVMKPVILVIAVVLFIAEFVS 123 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ + L E ++ + D + + +N + + + Sbjct: 124 PST-EQYASAWRLEKMQGEGAVLTERGGWQREGDSFYRFGAIRVDNVVLDLTRYRFEGRE 182 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + A+ +L + ++ R +++ + + + A + ++ + Sbjct: 183 LREAVSARRAVWRDGG--WVLENVDITRFVDGRTEVTHQATRPWQTELTPAELNRLLRRV 240 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 Q S L + + + F +++ L L++ Sbjct: 241 ETQAPSEL-WAHARYLEAQGQDATQPLLYFWQKMLMPLTMASLMLVAASFVFGPLRSVAA 299 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + F + +L L C + F ++ + Sbjct: 300 GTRVFYGVITGLVFKYLQDLLGPASTVFGFSPAWAVLAPTLICAALGFYMLRRS 353 >gi|150007422|ref|YP_001302165.1| hypothetical protein BDI_0773 [Parabacteroides distasonis ATCC 8503] gi|256839671|ref|ZP_05545180.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|298375396|ref|ZP_06985353.1| membrane protein [Bacteroides sp. 3_1_19] gi|149935846|gb|ABR42543.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503] gi|256738601|gb|EEU51926.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|298267896|gb|EFI09552.1| membrane protein [Bacteroides sp. 3_1_19] Length = 361 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 48/353 (13%), Positives = 111/353 (31%), Gaps = 2/353 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 +K + YI++ +++ + I+ I+ V I ++I+ + L I++ IP Sbjct: 5 LKRIDWYIIKQFLGTYVFAIALIISISVVFDINEKIDKFLNPDVPLKAIIVDYYLNFIPY 64 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + +E++ + +G S L+ P A +++I FI Sbjct: 65 FANLFSPLFTFIAVIFFTSKLADRSEIIAMLASGMSFRRLMLPYAVSATIIAIVTFILNA 124 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 I P + + +N ++ + Y+ + + F ++ Sbjct: 125 YIIPPAN-ETRIDFQNKYIRNKKVDYVKNAQLEIEPGVIAYFDSYDARSNMGYRFSLEHF 183 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + + D + + + IS K TL ++ V Sbjct: 184 EDKKLISRLTAKSIKYDSLYQWTVIDYMIRDFDGMREHISQGSRKDTTLTIVPSDFLISV 243 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L ++T++ E+HKR + I I + ++ Sbjct: 244 NDCETMTTPELNTYINRQKKRGIGNIQTFQIEYHKRFATIMAAFILTSIGASLSSRKIKG 303 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 I S +P + ++ +IFL Sbjct: 304 GMGMNIGIGLALSFSYILFMTVTSTFAINGYVSPAVAAWIPNIVYTFIAIFLY 356 >gi|73542369|ref|YP_296889.1| permease YjgP/YjgQ [Ralstonia eutropha JMP134] gi|72119782|gb|AAZ62045.1| permease YjgP/YjgQ [Ralstonia eutropha JMP134] Length = 373 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 49/363 (13%), Positives = 121/363 (33%), Gaps = 17/363 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ + R + + L ++ +++ + L ++ S N +L + G L Sbjct: 2 IFQQALRRELAYTAGAVFLVMLTFMLTSLVIRILGLAANGKASPNDVLILIGLATIGYLS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT +++E+++ + G S L+KPVL A + + Sbjct: 62 ILLSATLFISTLIVLTRWYKDSEMVVWFSAGISLRDLVKPVLQFAAPFILLSLLLGLFAW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + + S + F + Y+ + N + + Sbjct: 122 PWANQQSTLFRDRFEQRGVLSMIAAGRFIEPSNGNYVLFIEGIDGNMKYARNVFVANAEA 181 Query: 183 THKIYYAQSGS----IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 S + + +++ +G + +P D I++F+ Y ++ ++ + Sbjct: 182 NKIGVALAHQSTFETMPNGDRMVVMENGRRYAGTPGQIDYRIVEFERYAVKVDNKPPESA 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + +F L P N E R++ + F +I+I A + Sbjct: 242 NEQPPKSRDTFDLLRKPTLENLG---------ELLWRISLPILAFNFVMIAIPLAY---V 289 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-NPYYIPILYLFLFCISSIFLLMIKKK 357 + + P+ ++ I + + + + + LLM + + Sbjct: 290 NPRLGRYTPLVFAVLIYLTYSNLINLAQSWVRSGSIPFWLAWWPIHAVAFLAALLMFRYR 349 Query: 358 YTK 360 + Sbjct: 350 QNR 352 >gi|83721258|ref|YP_441378.1| permease [Burkholderia thailandensis E264] gi|167580136|ref|ZP_02373010.1| permease, putative [Burkholderia thailandensis TXDOH] gi|257139949|ref|ZP_05588211.1| permease, putative [Burkholderia thailandensis E264] gi|83655083|gb|ABC39146.1| permease, putative [Burkholderia thailandensis E264] Length = 365 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 52/364 (14%), Positives = 126/364 (34%), Gaps = 20/364 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ I +++ + +S + +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTIMLTSMMIRIVGYAASGEVNPKDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M+ + VLT +++E+++ +G S LIKP+ A + I + + Sbjct: 62 MILVGTLFVSILFVLTRWYKDSEMVVWLASGVSLTRLIKPIGVFATPIVILIAFFAFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P K + A+ Q S L F + + + + + + + Sbjct: 122 PWSNQQSKLIKARFQQRDEVSLLAPGQFRESAANHRVFFIEKMSPDQAKVQNVFVTTTEH 181 Query: 183 THKIY----YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + ++ + I+L +G + P + IM+F+ Y ++ +S + Sbjct: 182 GKVNVVVSQTGHTETMKNGDRFIVLENGRRYDGVPGQPNFKIMEFERYGVKIQSKQVVSQ 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 L NP N +EF R L + +++I A Sbjct: 242 PTTTGTSTPDLLRNPTNQNL-----------AEFAWRAGLPLIAINLMILAIPLAY---Q 287 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMIKK 356 +R + + +++ I + + ++ + P+ + ++ L + L + Sbjct: 288 NPRRGRTVNLVMAVLIYLTYSNLLNVVQSQMERGKIPFGLGLIGLHAIIAGVVAFLFWLR 347 Query: 357 KYTK 360 + Sbjct: 348 VRNR 351 >gi|194290552|ref|YP_002006459.1| permease, yjgp/yjgq family [Cupriavidus taiwanensis LMG 19424] gi|193224387|emb|CAQ70398.1| putative permease, YjgP/YjgQ family [Cupriavidus taiwanensis LMG 19424] Length = 376 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 42/361 (11%), Positives = 117/361 (32%), Gaps = 18/361 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + + R + + L ++ +++ + + ++ S N +L + G L Sbjct: 2 ILQQALRRELAYTAGAVFLVMLTFMLTSLVIRILGMAANGKASPNDVLMLIGLATIGYLS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT +++E+++ + G S L+KPVL A + + Sbjct: 62 ILLSATLFISTLIVLTRWYKDSEMVVWFSAGISLRDLVKPVLQFAAPFIVLALLLGLFAW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + + S + F Y+ + + + + Sbjct: 122 PWANQQSALFRDRFEQRGVMSMIAAGRFIEPAKANYVLFIEGIDADMKHARNVFVANAEA 181 Query: 183 THKIYYAQSG----SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 ++ + +++ +G + +P D I++F+ Y ++ ++ + Sbjct: 182 DKIGVALAHQGQFETMPNGDRLVVMENGRRYSGTPGQIDYRIVEFERYAVKVDNKPPESE 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + + + E R++ + F +I+I A + Sbjct: 242 ASLPP---------KSRDTIDLIRNPTRENLGELVWRISLPILAFNFVMIAIPLAY---V 289 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMIKK 356 + + P+ ++ I + + P+++ + L LL + Sbjct: 290 NPRLGRYTPLVFAVLIYLTYSNLINLSQSWVRNGSIPFWLAWWPIHLAVFLGALLLFRYR 349 Query: 357 K 357 + Sbjct: 350 Q 350 >gi|255013990|ref|ZP_05286116.1| hypothetical protein B2_08777 [Bacteroides sp. 2_1_7] Length = 361 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 47/353 (13%), Positives = 111/353 (31%), Gaps = 2/353 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 +K + YI++ +++ + I+ I+ V I ++I+ + L I++ IP Sbjct: 5 LKRIDWYIIKQFLGTYVFAIALIISISVVFDINEKIDKFLNPDVPLKAIIVDYYLNFIPY 64 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + +E++ + +G S L+ P A +++I FI Sbjct: 65 FANLFSPLFTFIAVIFFTSKLADRSEIIAMLASGMSFRRLMLPYAVSATIIAIVTFILNA 124 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 I P + + +N ++ + Y+ + + F ++ Sbjct: 125 YIIPPAN-ETRIDFQNKYIRNKKVDYVKNAQLEIEPGVIAYFDSYDARSNMGYRFSLEHF 183 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + + D + + + I+ K TL ++ V Sbjct: 184 EDKKLISRLTAKSIKYDSLYQWTVIDYMIRDFDGMREHITEGSRKDTTLTIVPSDFLISV 243 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L ++T++ E+HKR + I I + ++ Sbjct: 244 NDCETMTTPELNTYINRQKKRGIGNIQTFQIEYHKRFATIMAAFILTSIGASLSSRKIKG 303 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 I S +P + ++ +IFL Sbjct: 304 GMGMNIGIGLALSFSYILFMTVTSTFAINGYVSPAVAAWIPNIVYTFIAIFLY 356 >gi|171914738|ref|ZP_02930208.1| permease YjgP/YjgQ family protein [Verrucomicrobium spinosum DSM 4136] Length = 576 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 53/369 (14%), Positives = 111/369 (30%), Gaps = 13/369 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K E Y++R + + + + V+ +L + + S ++ LIP + Sbjct: 176 KILERYVMRSFLQPVMFCFIAFCTLWIVMDLLDNMQDFQENKISRAQIVMFYIKLIPFIF 235 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 V P + T L M+R EL+ + TG S ++KP +A S+ + Sbjct: 236 VTVAPISLLLSTLYTLGRMSRTNELISMLGTGKSMFDVLKPFYVIACCASLLGMAANYHW 295 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P ++L + + ++L L +R +D P + Sbjct: 296 APVSAGNKEKLLENVKERIGKNFLVMGLMYRNQEDRRTWFVGQVPEDLRGDRMRRIEIRQ 355 Query: 182 QTHK-----IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDIS--------IMKFKSYTL 228 + + ++A+S DR+ G + Sbjct: 356 EDDQGRLVKGWFAKSAFWWPDRKVWSFYSGVEVTYKNGQVVAMQNFDAGGGHPRIDFEGW 415 Query: 229 QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 + L + + L++ N Y L Y + R T ++ L Sbjct: 416 TETPWILLSGTLVPDYLGVPDLISYIRGNSAYGQRKLAPYLTHLFYRFTFPWQCLVVVLF 475 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 + + + + I + + F + P+ L L Sbjct: 476 AAPLSVVFSRRGLVGGLSMAVIFFFVLMFMDNLFLNLGKSNVIPPFISVWLPHLLLGSIG 535 Query: 349 IFLLMIKKK 357 I+L ++ + Sbjct: 536 IYLFKLRSQ 544 >gi|84500988|ref|ZP_00999223.1| permease, YjgP/YjgQ family protein [Oceanicola batsensis HTCC2597] gi|84391055|gb|EAQ03473.1| permease, YjgP/YjgQ family protein [Oceanicola batsensis HTCC2597] Length = 365 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 46/355 (12%), Positives = 110/355 (30%), Gaps = 12/355 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y R F+ + ++ +I + + + +SS+ +L+ +L++ P + Sbjct: 2 TLHYYFAWRFLRIFIGLLAVFLLMSMLIDVAEHLRRLSSTPATLSQVLRLVLLNAPEGIY 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + T + + R +EL++ G S + + + +A + + N I Sbjct: 62 TILPLIMILATVALFLGLARTSELVVTRAAGRSALRSLVSPVIVAFAIGVIGVAMVNPIV 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-----DLYIKISKYNPNNTLQGIFIVD 177 L Q L I+ ++ NP T + Sbjct: 122 AATSKRYAALLESYQSGGADVLSLSAEGLWLRQGGAEGQTVIRAARSNPQATELYDVTMI 181 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVH---RKSPISKDISIMKFKSYTLQTESAN 234 + ++ L A L+D + R + + A Sbjct: 182 AYAPDGGPEKRIEAARARLIAGAWELHDARIWPLARGTNPEARTERRESFEVPSSLTEAR 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + + + + + F L + LF V LI+ Sbjct: 242 IRDTFGEPSAIPVWDM-PTYIGLLTEAGFSARRHAVWFQMELAKPLFLVAMVLIAAAF-- 298 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 VR K + ++ + F +++ +++ + +N L + ++S+ Sbjct: 299 TMRHVRFGKTGIAVLSAIMLGFALYYVRNFVQ-ILGENGQIPVALAAWAPPVASV 352 >gi|323697852|ref|ZP_08109764.1| permease YjgP/YjgQ family protein [Desulfovibrio sp. ND132] gi|323457784|gb|EGB13649.1| permease YjgP/YjgQ family protein [Desulfovibrio desulfuricans ND132] Length = 391 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 63/364 (17%), Positives = 131/364 (35%), Gaps = 10/364 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + I + + F ++ ++ + V ++LQ +L S + +L++ YL P Sbjct: 1 MKLLQRQIFLELCKLFGLTVSCLLGLILVGRMLQLRSLFLSQNIGVLNILQLFFYLTPFF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++TP + M+ + EL+ + +G S ++ + L ++F F Sbjct: 61 LLLITPIATMLSVFLTFLRMSTDNELVALKASGVSLYRMLPAPVLFCSLCTLFAFFISFW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 K + L+ +F + ++ + + L+ F+ D Sbjct: 121 GLAWGMDMFKTKLYYFAKTHSKFALQPGVFNKEFPNITFYAHQVDNEKGELKFAFVRDDS 180 Query: 180 DTQTHKIYYAQSGSIDLD----RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 T + A + + + ++ ++G + R+S +I + S L + Sbjct: 181 IKGTSVVVVAPEAEVVSNPQEAKIHVVFHNGRIFRQSGDELNILKFRKYSIKLDLGKLLT 240 Query: 236 --STIVLKANDQNLSFLLNPNPNN---PNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 + KA D L + ++ P+ +EF+KRLT L I GL +I Sbjct: 241 GFNFAEQKAKDMPFFRLRDIRKDHSLMPHENERFFRKVDTEFYKRLTLPLGCFILGLFAI 300 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 A +RQ+ + + + +F + P Y LF ++ Sbjct: 301 PIASIFRGLRQQYGLLLAMGLFMVYYTMFSIGVSMGESGTIPPEYGMWAPDILFIFVALA 360 Query: 351 LLMI 354 L Sbjct: 361 GLRY 364 >gi|310778172|ref|YP_003966505.1| permease YjgP/YjgQ family protein [Ilyobacter polytropus DSM 2926] gi|309747495|gb|ADO82157.1| permease YjgP/YjgQ family protein [Ilyobacter polytropus DSM 2926] Length = 358 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 45/355 (12%), Positives = 112/355 (31%), Gaps = 11/355 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI +S ++S + I + Q+ + I V+ + L+P + Sbjct: 1 MKKIDRYITMNFIKSIVLSLFGFINIFILSQLFKVIRYVTEGRFGGVDAIYYIISLLPDI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + + M + E++ + +G S +I + +A ++S ++ + Sbjct: 61 IIKVMPLAVLLGGLMTINKMASSLEIIALKTSGISFKRIITFPILIAFIISCGVYYMNDK 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF---IVD 177 I P+ +++ + + F R D+ N + +D Sbjct: 121 IYPESIKKSREIKRGGYEDMELPESRKKAFLRGKDNYVYYAESINRITSTAVNIEILELD 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 S + KI A+ G + + + V+ S ++ + E Sbjct: 181 SEFEKLTKIITAEKGIYHRENKLWKFENVTVNNLEKKSS-YTLPVMQDVRYDDEPERFLA 239 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + + + E R + + + + Sbjct: 240 PSVNPKLLTIKEMRSTLGAIKQTGG-NSREILMELGDRTSFSFASFVVSFLGLSLG---- 294 Query: 298 LVRQRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 R + + +++S+ G ++ + I P + ++ I + L Sbjct: 295 -SRYVRGASAVSVAMSVGLGYSYYIVQASMEAISMGGVIHPFIGAWIPNILFLIL 348 >gi|209964085|ref|YP_002297000.1| predicted permease YjgP [Rhodospirillum centenum SW] gi|209957551|gb|ACI98187.1| predicted permease YjgP [Rhodospirillum centenum SW] Length = 414 Score = 97.0 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 56/360 (15%), Positives = 123/360 (34%), Gaps = 11/360 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + YIL + +S + ++ + +IL+ +L+++ ++L+++ L+P L Sbjct: 21 RLIDRYILTETAKPLALSLVVVMLALLLERILRLFDLLANHGGPFQLVLRMAANLVPHYL 80 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P F + V+ EL + ++G S + +P L+L L +F + I Sbjct: 81 GLALPAAFFISMFVVVARFGDENELDALQSSGLSVPRITRPFLWLGTGLMVFSVLLFGFI 140 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 +P R + + A + + ++ F + I +P V Sbjct: 141 QPYSRYAYQAIHYAVVNAAWDATVPQSAFVDAGQGVTITADMVDPTGRNLERVFVQQLRD 200 Query: 182 QTHKIYYAQSGSIDLDRQAII----LNDGEVHRKSPISKDISIMKFKSYTLQ----TESA 233 + A+SG + + L++G R P + +++F TL E+ Sbjct: 201 GEEWVTTAESGRLGVSDDRKRILLTLDNGVQVRTRPD-ATVEVVRFGRLTLDREFTLEAP 259 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + L L + T +EFH RL + + + L+++ Sbjct: 260 PFRPRGGSERELTLVELWQEM--HQPITLVPRGTLEAEFHARLVRAVSLPLMPLLALPMG 317 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 R+ I L + + + +F + +L Sbjct: 318 MAAKRARRGLGIALAAAILVLYHHSIQMGESLADIGRVPAALGIWVPFVVFALLCGWLFY 377 >gi|300774823|ref|ZP_07084686.1| YjgP/YjgQ family permease [Chryseobacterium gleum ATCC 35910] gi|300506638|gb|EFK37773.1| YjgP/YjgQ family permease [Chryseobacterium gleum ATCC 35910] Length = 370 Score = 97.0 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 54/369 (14%), Positives = 124/369 (33%), Gaps = 15/369 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLV-----SSSTESLNILL-KISG 54 +K + YI++ +F + + + VI + Q+I + L L Sbjct: 2 LKIVDRYIIKKYLGTFSFMLVLLSIVVLVIDVQQKIPRIENAKAIDPKLDLMYFLIHFYP 61 Query: 55 YLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFL 114 + I ++ + + M NTE++ I ++G S KP L +I + + Sbjct: 62 FWIINLVVTFLSILVFISVIYFTSRMANNTEIVAIISSGASFHRFSKPYLVTSIFIGLIA 121 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYL--EENLFFRLDDDLYIKISKYNPNNTLQG 172 + +++ P +L A A + +L YI I +N Sbjct: 122 LVVYHMVLPWANIKKNELEAYTYNAANKEKILGTAPASSQLSKTEYIFIDSWNKREKRGS 181 Query: 173 IFIVDSRDTQTHKIYYAQSGSIDLDR--QAIILNDGEVHRKSPIS-KDISIMKFKSYTLQ 229 F+ D Y ++ + D+ + +LN+ + + + ++ Sbjct: 182 SFVYQKYDKDRKMTYELKASEVYWDKAKKQFVLNNYLEKTINKDNSEKLNNGIELRKNYG 241 Query: 230 TESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 L ++ LL L +Y +E H+R + + +I ++ Sbjct: 242 HSPEELFPNELLGQNKTTPELLKFIEREKARGNSNLNSYLNELHQRTSMPVSIIILTFLA 301 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISS 348 + + ++ + I +S++F + F + E + ++L Sbjct: 302 LSL---SSQKKRGGLGINLAIGISLAFIFVFSFEALKVVSENKSLSPALAMWLPNLVFLP 358 Query: 349 IFLLMIKKK 357 + L + K+ Sbjct: 359 LTLYLYIKR 367 >gi|295675785|ref|YP_003604309.1| permease YjgP/YjgQ family protein [Burkholderia sp. CCGE1002] gi|295435628|gb|ADG14798.1| permease YjgP/YjgQ family protein [Burkholderia sp. CCGE1002] Length = 365 Score = 97.0 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 54/362 (14%), Positives = 120/362 (33%), Gaps = 16/362 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ + +++ + +S +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTLVLTTMMIRIVGFAASGEIDPRDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT +++E+++ ++G S IKP+ A + I + + Sbjct: 62 IMLVATLFVSILFVLTRWYKDSEMVVWLSSGVSLTQFIKPIGIFATPIIILIMFFVFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P K + A+ Q S L F + + + + + Sbjct: 122 PWSNQQSKLIRARFQQRDEVSLLAPGQFRESPSTHRVFFIEKMSPDQGHVENVFVTSTEG 181 Query: 183 THKIYYAQSG----SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + ++L +G + P D IM+F+ Y ++ +S Sbjct: 182 GKVNVVVSKNGHVETHKNGDRFVVLENGRRYDGEPGHPDFRIMEFERYGVKIQSQPVVNT 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD-KRA 297 ++ L NP N +EF R L + L++I A Sbjct: 242 PTTTGLPTMTLLRNPTNENL-----------AEFAWRAGLPLIAINLMLLAIPLAHQNPR 290 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 R + + I L+ S + ++I + IL++ + I + M + Sbjct: 291 RSRTINLVMAVLIYLTYSNLLNVVQAWIEQGKMSFGIGLVILHVIVLGIVAFIFWMRVRN 350 Query: 358 YT 359 Sbjct: 351 RP 352 >gi|149201834|ref|ZP_01878808.1| permease, YjgP/YjgQ family protein [Roseovarius sp. TM1035] gi|149144882|gb|EDM32911.1| permease, YjgP/YjgQ family protein [Roseovarius sp. TM1035] Length = 378 Score = 97.0 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 47/358 (13%), Positives = 111/358 (31%), Gaps = 16/358 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 E Y R SF+ + ++ I +I ++ + + +L I +P Sbjct: 17 ILERYFGRRFFVSFMGVTITMLVIMGLIDLMDELGDFPE--LAFGQVLGIVLLKLPEAYY 74 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + + + + R++E++++ +G S + + +A+ + + N + Sbjct: 75 EIIPLVMILASVALFLRLARSSEMVVLRASGRSALRGLLAPAAVALAIGLLGLAVGNPLV 134 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFR------LDDDLYIKISKYNPNNTLQGIFIV 176 L + + + +TL G Sbjct: 135 AATAKRHHDLVNTYSGQTYSDLAIASEGLWLRQGGTAGQTVIYAARSSSDLSTLYGPSFY 194 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK---SYTLQTESA 233 D + S + L+ A +L D ++ + ++ + + S Sbjct: 195 DFAPDGQPLRRISAS-TARLETGAWLLEDAKIWDLAENINPEAMARQEAQLSVPSDLTQD 253 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + L + Y F L Q +F V LI AA Sbjct: 254 RILDSFGSPEYIPIWEL-PKFIDQLEEAGFSARRYAIWFQSELAQPVFLVALVLI--SAA 310 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 R + ++ + FG+ + ++ H + +N +L + ++S+F+ Sbjct: 311 LTMGHTRGANVGLSVLTAVLLGFGLHYVRNFA-HILGENGQLPILLAAWAPPVASLFI 367 >gi|312888277|ref|ZP_07747853.1| permease YjgP/YjgQ family protein [Mucilaginibacter paludis DSM 18603] gi|311299111|gb|EFQ76204.1| permease YjgP/YjgQ family protein [Mucilaginibacter paludis DSM 18603] Length = 362 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 47/343 (13%), Positives = 114/343 (33%), Gaps = 6/343 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPTV 60 K F+ YI++ +F+ + + + V + ++++ + SL I+ + IP Sbjct: 7 KIFDWYIIKKYLGTFVFTIAIFIVVIVVFDVSEKLDNFLKNNVSLKEIIFEYYAGSIPFY 66 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M++P + M TE++ + ++G S ++P A L+ I +++ Sbjct: 67 IDMLSPLINFLAVIFFTAKMANQTEIVPVLSSGASFNRFLRPYFICASLIFIVSLLADIY 126 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +K A + L + + S N + T + Sbjct: 127 LIPFTN-KLKITFENAYVVLEDPTKSDVHIKLDEHTFVYMQSFDNASKTGYQFTLEKFDG 185 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + A D ++ + + + + + + + K L A+ Sbjct: 186 DVLKQKLTANKIVYDSLKRVWSIQQFDTRYVNGLREKMVHGEKKDTVLDMVPADFVLHNN 245 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + + L N ++ E +KR + + LI + + Sbjct: 246 IYSAMSRKELDNNIKKEEYRGTGVINDMLIEKYKRFVHPMASFVLTLIGVSL---SSRKV 302 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 + P+ I + F + + + PI+ +F+ Sbjct: 303 RGGVGLPLGIGFFLCFAYIVVDQFAVVFSLKGG-LPPIIAVFI 344 >gi|15807418|ref|NP_296151.1| hypothetical protein DR_2431 [Deinococcus radiodurans R1] gi|6460246|gb|AAF11972.1|AE002073_2 conserved hypothetical protein [Deinococcus radiodurans R1] Length = 420 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 54/373 (14%), Positives = 135/373 (36%), Gaps = 26/373 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK FE Y+L I + + ++ + + + + I + + S ++ ++ +P Sbjct: 6 MKLFERYVLSEILPPLVGALAAVILLFLLAGLEEVIGPLLAKGASPLLVARLLALSVPEA 65 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P T L+ + ++E+ G L++PVL LA+ +++ F+ Sbjct: 66 LSRALPIGLMFATLLGLSRLAADSEIKGALAGGVPVTRLLRPVLLLALGITVLSFLIGEG 125 Query: 121 IEPKCRSTIKQLSAKAQLALT-------FSYLEENLFFRLDDDLYIKISKYNPNNTLQGI 173 + PK S ++ + + L + I + + P L+ + Sbjct: 126 LRPKAYSESLRVQQQIVFDNPRVTGLGQAGEGGQTLVLTDALNRAISVGEVRPGGELRDL 185 Query: 174 FIVDSRDTQTHKI-YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT-- 230 IV + + + A+SG++ + L G+ + ++++ F++ L Sbjct: 186 RIVAMQAGEAPREVITAESGTLVPGSNVLELRRGQRVTYQNA-RPVTVLSFENGRLPVQD 244 Query: 231 ------ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVI 284 + SST + L L + + + + FH+++ + L + Sbjct: 245 VQANFAKDERSSTAQAGLVNLPLRELWDRTEAFRQQKVPAPAEFTA-FHRKIAEPLAALA 303 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL--- 341 ++ A + ++ ++F + +S + +N P++ Sbjct: 304 LAFFAVSLAV---YSFRGSLNLGFTWAILLAFAYYATWSVF-RIMGENGGLPPVVAAYAP 359 Query: 342 -FLFCISSIFLLM 353 + ++ + LL Sbjct: 360 DLIAVVAGLALLW 372 >gi|220925666|ref|YP_002500968.1| permease YjgP/YjgQ family protein [Methylobacterium nodulans ORS 2060] gi|219950273|gb|ACL60665.1| permease YjgP/YjgQ family protein [Methylobacterium nodulans ORS 2060] Length = 362 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 39/354 (11%), Positives = 98/354 (27%), Gaps = 12/354 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTV 60 + YI + R L + + + + ++ + + ++S P++ Sbjct: 5 TTLGRYIAGRLLRMIAGVFLTVFALVYTLDFVELMRRAGETQGIGALTVARLSLLRTPSI 64 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + PF L ++R EL++ G S ++P +F+A+ + + + N Sbjct: 65 AEQIMPFAILFGAMGALLQLSRKLELVVARAAGISAWQFLQPGVFVALAVGALMVGAYNP 124 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRL----DDDLYIKISKYNPNNTLQGIFIV 176 + + ++ A+ ++L+ R + + TL G+ + Sbjct: 125 MAAALKQHSTEIEARIFSRSNRGGSGKDLWIRQRSVDGQAIVRAETAIEGTTTLAGVSVF 184 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 D T + D + + R + Sbjct: 185 AFDDQGTFTQQIEARQATLHDGYWEL----QDARVLAKDSQPESYDTYLVASNLVPSQVR 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + YR + L + + V L++ + Sbjct: 241 QRFTPPDSVPFWQLGD-TIARSERAGLDATRYRLQRAVLLARPMLFVAMVLVAASVSL-- 297 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 R ++ F ++ + P+ F + S+ Sbjct: 298 RFFRFGGIGRMALAGVAAGFALYVARQVMEGLGASGIVAAPVAAWFPAVVGSLL 351 >gi|329114705|ref|ZP_08243463.1| Permease YjgP/YjgQ Family Protein [Acetobacter pomorum DM001] gi|326695971|gb|EGE47654.1| Permease YjgP/YjgQ Family Protein [Acetobacter pomorum DM001] Length = 411 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 61/361 (16%), Positives = 128/361 (35%), Gaps = 10/361 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + + Y++ + FL++ ++ + ++L NL+++ + I + + L+P L Sbjct: 34 TLDRYLIAQVMPPFLVALSVVMIALILERLLVLFNLLAAGNNHIGIFIGLLAALLPHYLG 93 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + V+ M++N E+ I+++G S + + +P + L ++L I F+ I+ Sbjct: 94 LAIPAALCVAVFTVIRRMSQNEEIDAINSSGLSLLRITRPYIQLGVILGILSFLLYGFIQ 153 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P R + A L+ +F L I K + + + + Q Sbjct: 154 PHARYDFRSTFYIASHTGWAPRLQPRMFASPSSQLTIVADKVSQSGSDLENVFIRDLSEQ 213 Query: 183 THKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES----ANS 235 + A++G I I V S++ F T + Sbjct: 214 QERDITARNGHIRIGLDGETVEIDLTHGVIVTDKGDGVPSLVTFDHSTRYLTHASHVSPF 273 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 T + L+ + RSE H R+ + L L++ A Sbjct: 274 RTRGEDERELTSPELVGRLIRHDPSISRPH--MRSEVHFRMARSLTVPFIPLLAASLALM 331 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 R R + FI + + F F + + ++ + +F + LL+ K Sbjct: 332 RKRQRNNAGLPLAFI-IMVGFDHIIQFGHSMVATKKASLLLIWGPSLVFIVGCTLLLLYK 390 Query: 356 K 356 Sbjct: 391 S 391 >gi|90021020|ref|YP_526847.1| queuine tRNA-ribosyltransferase [Saccharophagus degradans 2-40] gi|89950620|gb|ABD80635.1| permease YjgP/YjgQ [Saccharophagus degradans 2-40] Length = 360 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 47/353 (13%), Positives = 127/353 (35%), Gaps = 25/353 (7%) Query: 14 RSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMET 73 S L L ++ I + + + ++ +LL + Y +P L ++ P + Sbjct: 1 MSMLAVSLILLLIIISARFVTYLAEAAAGELDGGVLLTLMTYRLPAYLELILPLGLFLGI 60 Query: 74 TNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLS 133 + +E+ ++ G S+ LI + +++ + + + P+ ++L Sbjct: 61 LMAYGRLYLESEMTVLHACGLSQGKLIGFTMVSTFVVACVVGVFSLYLGPEGVRASEKLL 120 Query: 134 AKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-----SRDTQTHKIYY 188 A+ + F L+ F LD I ++ ++ + + + Sbjct: 121 AEQRNRTDFETLKPARFHELDGGSGISYAESISDDKQKLQKVFMAKLAPDSVDDDLTVLT 180 Query: 189 AQSGSIDLDR----QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAND 244 A+SG +D + ++L +G + P + +++FK+++ + + K Sbjct: 181 AESGETVVDAETGVKYLLLKNGRRYVGRPGEVNYKVVEFKTFSQILPEPDYEAVKPKKET 240 Query: 245 --QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + + L R+ RL+ + ++ GL+++ ++ Sbjct: 241 DGLSTAQLFE----------RDTLAARAALQWRLSLPVLVMVVGLLAVPL---SRTQPRQ 287 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIE-QNPYYIPILYLFLFCISSIFLLMI 354 + + ++ + + IE + +I +L++ + LL+I Sbjct: 288 GRYAKMLPAILLYIFYLVCVNGARGAIEDGSAPFIGLLWVVHGAFFCLALLLI 340 >gi|170743204|ref|YP_001771859.1| permease YjgP/YjgQ family protein [Methylobacterium sp. 4-46] gi|168197478|gb|ACA19425.1| permease YjgP/YjgQ family protein [Methylobacterium sp. 4-46] Length = 362 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 42/353 (11%), Positives = 100/353 (28%), Gaps = 12/353 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTVL 61 + YI R L + + + + ++ + + S + +S P V Sbjct: 6 TLGRYIAARFLRMIAGVFLTVFALVYTLDFVELMRRAGEAPGASALTVAHLSLLRTPAVA 65 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF L ++R EL++ G S ++P + +A+ + + + N + Sbjct: 66 EQIMPFAILFGAMGALLQLSRKLELVVARAAGISAWQFLQPGVLVAVGIGALMVGAYNPL 125 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRL----DDDLYIKISKYNPNNTLQGIFIVD 177 + Q+ A+ T L +L+ R + + +L G+ I Sbjct: 126 AASLKQRSTQVEARIFARSTKGGLSNDLWIRQRSVDGQAIVRASTAIEGTTSLAGVTIFT 185 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + D + + + + S + + + Sbjct: 186 FDAQGAFGQQIEARRATLHDGYWELQDARVLTQDSGPESYDTYL----VASNLAPSQVRQ 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 V + L + YR + L + + V L++ + Sbjct: 242 RVTPPDSVPFWQL-SETIARSERAGLDAARYRLQRAVLLARPMLFVAMVLVAASVSL--R 298 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 R ++ F ++ + P+ F + S+ Sbjct: 299 FFRFGGIGRMALAGVAAGFALYVARQVMEGLGASGIVAAPVAAWFPAVVGSLL 351 >gi|124267133|ref|YP_001021137.1| hypothetical protein Mpe_A1944 [Methylibium petroleiphilum PM1] gi|124259908|gb|ABM94902.1| conserved hypothetical protein [Methylibium petroleiphilum PM1] Length = 373 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 35/374 (9%), Positives = 111/374 (29%), Gaps = 18/374 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M++ + + + + + + + I ++ ++ + ++ +P Sbjct: 1 MRTVRRLLYADVLGAVTFVAVSFLSLFFFIDFVEELDDIGRGAYRVHHAALYCLLELPGR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + T + + +++E I+ G + + + + ++ F+ + Sbjct: 61 LYELLPIAVLIGTIYAMARLAQSSEFTILRTGGLGPGRALSLLAKIGLAFAVLTFVVGDY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRL-----------DDDLYIKISKYNPNNT 169 + P + + L + + + + + I I P+ Sbjct: 121 VGPYFDAKAQTLRSTLRGSASGGGNNSAWLKDRRAAAPGELPAGERIDSINIGNVGPDGL 180 Query: 170 LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDI---SIMKFKSY 226 L + I + + A ++ D + + + + Sbjct: 181 LDDVRIYEFSEEGQLLARVAAEHAVVEDGAWRLKKVRLTRWHAASGDGLPVDERRDELRW 240 Query: 227 TLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFG 286 + + V + L ++ + + + +F K+ L ++ Sbjct: 241 PTRLTPSVVGAAVSPLKSMSTVDLYR-YMSHLSQNEQAAQRQEIQFWKKALYPLACLVMV 299 Query: 287 LISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCI 346 +++ A A I L ISF + S + + +I F + Sbjct: 300 GLALPFAYLHARAGGVSVKVFGGILLGISFVLLNNVSTHLGLLRDWTPWIAAAAPGAFYL 359 Query: 347 S---SIFLLMIKKK 357 + F +++ + Sbjct: 360 LLSMAAFSWLVRYR 373 >gi|260433487|ref|ZP_05787458.1| permease, YjgP/YjgQ family [Silicibacter lacuscaerulensis ITI-1157] gi|260417315|gb|EEX10574.1| permease, YjgP/YjgQ family [Silicibacter lacuscaerulensis ITI-1157] Length = 366 Score = 96.6 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 44/355 (12%), Positives = 115/355 (32%), Gaps = 11/355 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y R +SF++ + + +I +++++ + S LL+++ P + Sbjct: 2 ILDRYFARRFLQSFVVIGAIFLTLMILIDLIEQVRRFGDADLSFGQLLQLTLLNTPAAIS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + T + + R++EL++ G S I + + LA+ + N I Sbjct: 62 EMLPLLMILSTIALFVGLARSSELVVTRAIGRSGIRALAAPVALALGIGALAVALLNPIA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-------LYIKISKYNPNNTLQGIFI 175 + LS + + + + L ++ ++ L + I Sbjct: 122 AATSEKYETLSDQYRNGGSSTLSLSRDGLWLRQGSKDGQSVIHAAGTENGDTLKLIDVTI 181 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + + LD Q ++ + + + ++ + L T Sbjct: 182 ITFSPQGIPTRQIIAQSAELLDGQWLLRGVKDWSLSRAANPEFFSSEYDTLALPTTLTRE 241 Query: 236 STIVLKAND-QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + + + L + + Y +L + F V LI Sbjct: 242 RILDRLGHQGLVSIYDLPQLIRDLAQAGFSTKQYEVWLQAQLARPFFLVSMVLIGAAF-- 299 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 VR + ++ + F +++ ++ + +N +L + ++I Sbjct: 300 TMRHVRFGGTGIAVLTAVLLGFAIYFVRNFAQ-ILGENGQLPVMLAAWAPPFAAI 353 >gi|262280664|ref|ZP_06058447.1| permease YjgP/YjgQ family protein [Acinetobacter calcoaceticus RUH2202] gi|262257564|gb|EEY76299.1| permease YjgP/YjgQ family protein [Acinetobacter calcoaceticus RUH2202] Length = 356 Score = 96.6 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 43/356 (12%), Positives = 113/356 (31%), Gaps = 4/356 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y+ + + + + + + + L + + + L + P L Sbjct: 5 RIVAKYVTKTTALAMFGTTVVLSILQVLFTYLGELGELKPD-YNAWQALIYVLWGAPRYL 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L S+ ++EL+++ + G S ++ V+ A+LL I F + Sbjct: 64 YEILPISALIGAVIGLGSLATSSELIVMRSAGISLWRIVGWVMRSALLLIILSFALSEWV 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + + +A + +Q + ++ Sbjct: 124 IPYTNEKAQSVKSHRSVAALGEVKGYWSREGQRFIYIDYANSQGNLKDIQ--VVDFDQNY 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + AQ G + Q + ++ + + + +S L + + L Sbjct: 182 YLQSLINAQQGQFVKNGQWALKKAEQMDILAAGNAIKTDHDEQSLALALQPKYVHMVTLD 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 D + S L++ Y ++ +TY+ F +++ + L++ + Sbjct: 242 PEDLSPSQLISFMRYMDEY-SQVPKTYQLAFWQKVASPFSLIALVLVACSFIFGPLRQQS 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I + + +SF F + +L L + L+ + + Sbjct: 301 MGFRLVIALFIGLSFYYLQDFLGYASLVYSPSPAWFVLVPILLMFGAGSYLLYRAR 356 >gi|152981500|ref|YP_001354149.1| hypothetical protein mma_2459 [Janthinobacterium sp. Marseille] gi|151281577|gb|ABR89987.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 382 Score = 96.6 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 50/382 (13%), Positives = 111/382 (29%), Gaps = 26/382 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y IGRS L + + + ++ + V + +P Sbjct: 1 MKILQKYFSLEIGRSVLFVLIAFLALFAFFDLVGELKSVGHGGYKIQHAFLYVVLEMPGY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + T L+ +E I+ + S + +L + ++ ++ F+ Sbjct: 61 VYELMPIAALIGTIWALSQFAARSEFTIMRASSMSTAMVGAILLKIGVVFALITFVFGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-----------LYIKISKYNPNNT 169 + P + +++ +Q L+ + ++ + + P+ Sbjct: 121 VVPITSNMAERIRVNSQGGALSQEFRSGLWTKDVIRSNGQEGEVLGSRFVNVRELRPDGK 180 Query: 170 LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPIS-------------K 216 L + I + + LNDG V Sbjct: 181 LMNLKIYEFNRNFHLTSLITAGSADYAGANTWTLNDGTVAAFGESKLQGATTATDITTAI 240 Query: 217 DISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRL 276 S K +S + S + L+N + Y K++ Sbjct: 241 STSKFKTQSLVSEMTPEILSVGFTDPATMSAIALVN-YTQYLSENNRDTVRYEIALWKKV 299 Query: 277 TQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISF-GVFWGFSYIIHKIEQNPYY 335 + +++ A I + +SF + FS++ P+ Sbjct: 300 VYPFAVFVMMALALPFAYLHFRSGGVSLKIFTGIMIGVSFQLINSLFSHLGLLNTWPPFA 359 Query: 336 IPILYLFLFCISSIFLLMIKKK 357 IL LF ++ LM ++ Sbjct: 360 TAILPSLLFLTVAVGALMWVER 381 >gi|241663807|ref|YP_002982167.1| permease YjgP/YjgQ family protein [Ralstonia pickettii 12D] gi|240865834|gb|ACS63495.1| permease YjgP/YjgQ family protein [Ralstonia pickettii 12D] Length = 397 Score = 96.6 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 46/396 (11%), Positives = 112/396 (28%), Gaps = 43/396 (10%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M +E Y R I F+ ++ + +L + V +L PT Sbjct: 3 MPVYEKYFARQIYGVFVFILFAVLALFIFFDMLGELGSVVGRYTTLVAFFH-VMLQAPTR 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + V + M +E I G + + +A+ L++ +I Sbjct: 62 VYEVIPVAALISAIYVFSQMASQSEFTIFRVAGLDTRRALLSLFKIALPLALVTYIFGEF 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-----------LYIKISKYNPNNT 169 I PK +++ +A A + ++ + ++ + P+ + Sbjct: 122 IGPKAEEYAQKVRLEALGATVSAGFRSGVWVKDRGPAKADGTGGEVTRFVNVGALQPDQS 181 Query: 170 LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKS----------------- 212 ++G+ I + + Q LND R Sbjct: 182 IKGLRIYEFDSDYRLSSIRVAEQARYQGHQNWQLNDVTETRFVEFPRKPGTVAPQDTVQA 241 Query: 213 ----------PISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRP 262 + + + + + S +++ + L + Sbjct: 242 VPGAPDALAPDFRGEQTKLPHQEMRSELTPQILSVLMVTPDRMATLDLFQ-YIRHLRDNK 300 Query: 263 ELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGF 322 + + Y K++ ++ +++ A R +F + + Sbjct: 301 QDTQRYEIALWKKVVYPFTVLVMMALALPFAYL--HARAGAVGLKVFGGIMLGLSFQLVN 358 Query: 323 SYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + H N + I + + L +I ++ Sbjct: 359 NLFSHVGLLN-TWPAIFTAIVPGALYLALALISLRW 393 >gi|251771422|gb|EES52001.1| permease YjgP/YjgQ family protein [Leptospirillum ferrodiazotrophum] Length = 361 Score = 96.6 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 47/354 (13%), Positives = 118/354 (33%), Gaps = 7/354 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK +I+ + + +S + + I VI +++I + +++ + + V Sbjct: 1 MKILTRHIMGEYIKIYFLSLVSLEAIYLVIDSVEKIKSFLAHHAPWSLMGEFFAWRSIEV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 V P + T L ++N E+ I G S P++ LLS+ + Sbjct: 61 GFRVIPMSALLATILALGIASKNHEITAIRAAGISLGKATFPIVLFGALLSLIELLLNLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFS--YLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 + P T + + + + N++FR +I+K T + Sbjct: 121 VVPHAYQTTDVIMEERINQGSGWSGEVRRNVWFRHGSREIFRIAKIEQGGTRLDTVTIYH 180 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + + ++ ++ + + +DG +S F + + + Sbjct: 181 KSPKADLQWTIEAKTLLYENGGWVFHDGV-RTLFHKDGTLSSESFATLPFPLDRRPADFF 239 Query: 239 VLKANDQNLSF-LLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + K + +L++ L+ + + + L + L +I Sbjct: 240 IRKTHLSHLTYAELSRTIDLLKANGLPHKNFTVLRDGVLAFPAASFLMVLFAIPFGI--R 297 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 RQ ++L +S +W + + + P+L + + + + Sbjct: 298 EGRQVGIARGFGVALMLS-LSYWTLYSMGLALGRGGVIPPLLAAWFANLVVLAV 350 >gi|302391952|ref|YP_003827772.1| permease YjgP/YjgQ family protein [Acetohalobium arabaticum DSM 5501] gi|302204029|gb|ADL12707.1| permease YjgP/YjgQ family protein [Acetohalobium arabaticum DSM 5501] Length = 372 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 64/364 (17%), Positives = 140/364 (38%), Gaps = 10/364 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YIL+ + FL+ + I I + + +L+ +L+ +LK+ Y +PT++ Sbjct: 5 KLIDKYILKEVTILFLIGLIIISIIMLSSFLFELTDLIIIRKVALSSVLKLLIYKLPTII 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P T L ++++ E+ + S LI P++ L +++S ++ + Sbjct: 65 VRAIPMSVLFATIIGLGRLSKDNEITALRMGSISIYRLILPLIILGLIISGGNYLLNEKV 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRD 180 P + + + L ++EN+FF+ + I KYN +T++ I I + Sbjct: 125 VPFSNKRFQVIMNETVLKSRMPEIKENIFFKGTRNKLFYIGKYNESQSTVKDIVIYELDS 184 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 Q + + LN+G +++ + I+ KFK T+ ++ + Sbjct: 185 KQDYPNIIMANKGRVYKDNKWELNEGYIYKYNNDGNLINKDKFKDITVGFKANINRFADQ 244 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 ++ + L + E+H + +IF L+ + + K + Sbjct: 245 QSPSEMSIKELKEEIEFLKKIGADPNSLLVEYHLKFAMPFSALIFILVGSILSIKGKNSK 304 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL----FCISSIFLLMIKK 356 + I I ++ + + +N + P++ +L F I L I Sbjct: 305 GVNILFTIIII-----FFYYLLLSLSRSLGRNEVFSPLVAAWLTNFIFIILGAILFYIDN 359 Query: 357 KYTK 360 + K Sbjct: 360 PFRK 363 >gi|331001131|ref|ZP_08324762.1| permease, YjgP/YjgQ family [Parasutterella excrementihominis YIT 11859] gi|329569436|gb|EGG51214.1| permease, YjgP/YjgQ family [Parasutterella excrementihominis YIT 11859] Length = 378 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 46/379 (12%), Positives = 123/379 (32%), Gaps = 24/379 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK I I +S L L +V + ++ + + +S S+ ++ ++PT Sbjct: 1 MKIVSRMIFAQIMKSSLFVLLTLVALFAFFDLIGQSGNIGTS-YSMGQAFLLTALILPTR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 V P + + L+ + ++ ++ +G +L I+L I ++ N+ Sbjct: 60 CYEVLPIAVMLGSIFTLSRLASTSQFTVLRVSGIGPWRFCGMLLMPGIVLVICAYLLGNL 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL----------YIKISKYNPNNTL 170 + P + K+ + ++ + D ++ + + P Sbjct: 120 VAPPAQRLAKEFKLDISGSAFTGKELDSGIWVRDVQRNEAGEPKKISFVNVQRLRPGEAA 179 Query: 171 QGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDG----------EVHRKSPISKDISI 220 I +++ +L+D E ++ + + Sbjct: 180 YDWVIYVFDRPDHLTSIVTAKSGTYSEQEGWVLHDVVEETVPTLPKESREQTQARVERKV 239 Query: 221 MKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWL 280 MK + + +++K D +L L + + + + + F + L Sbjct: 240 MKSMVWGKSLDGNIFGLLMIKPEDMSLQEL-HYYIEYLKENGQTYKRFDTAFWSKAFYPL 298 Query: 281 FPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY 340 ++ L+S+ A + A I + I + + ++ P I + Sbjct: 299 AILVMLLLSMPFAYQNARAGGMAIKIFCGIMIGIFYYALNNLFAFMSALDSVPSIISAIL 358 Query: 341 LFLF--CISSIFLLMIKKK 357 + + I + ++++ Sbjct: 359 PSVMMTLAAIIAMWYVERR 377 >gi|300718541|ref|YP_003743344.1| permease [Erwinia billingiae Eb661] gi|299064377|emb|CAX61497.1| putative permease [Erwinia billingiae Eb661] Length = 366 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 52/356 (14%), Positives = 122/356 (34%), Gaps = 17/356 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGEIPTNLVLTLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + L + +I ++ + Sbjct: 62 LILPLSLFLAILMTLGRLYTESEITVMHACGLSKAVLVKAAMVLMLFTAIVAAVNVAWLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +++ A+ + L F + D + + N +F+ R Sbjct: 122 PWSSRYQSEVTQNAKANPGAAALAAGQFQQSGDGQSVMFIENVKGNNFGNVFLAQLRPKG 181 Query: 183 T--HKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A G + Q + L+ G + + +D I F++Y + Sbjct: 182 NARPSVVLADKGHMTQGPDGSQIVTLDKGTRFEGTAMLRDFRITDFENYQAIVGHQDVVL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 A + L +RSEFH RLT ++ L+ + + Sbjct: 242 DPNDAEQMDFKTL----------AQSDKPEFRSEFHWRLTLVFSVLVMALMVVPLSVVNP 291 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + + P + I F + K +P +++ + +L+ Sbjct: 292 RQGRVLSMLPAMLLYLIFFLLQSSLRSSGQKARLDPALW--MWVVNLSYLGLAVLL 345 >gi|330752158|emb|CBL87118.1| predicted permease YjgP/YjgQ, transmembrane [uncultured Flavobacteria bacterium] Length = 359 Score = 96.2 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 52/360 (14%), Positives = 114/360 (31%), Gaps = 8/360 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 M + YI SF + ++ IA V I Q+++ + ++ I++ + Sbjct: 1 MNRLDRYIFFRFLGSFFLFLGLVMMIAVVFDISQKVDNFINKNADISTIIIDYYVNFLAF 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + + T V M R++E++ G S LIKP L A++L I + Sbjct: 61 YGTTFSSLIVFLSTIFVTGRMARDSEIVAALTGGVSFPRLIKPFLLGALVLFIGNSTLSH 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + PK L D + Sbjct: 121 FVIPKTNIARIHFEDTYVQDKIIKRPINIHRQVLPDHYIYIETWSPERLGGYHFSYERFE 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTI 238 + + + A D ++ +++ + + + + + S Sbjct: 181 NDRMIEKLMADFVRYDTSQKQWQVDNWTLRTWLKSGEMKLESGRRLDTSFAFDPTTISPD 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + + LL E + ++ E+HKR+ I I++V + Sbjct: 241 LRSTSTMTSPQLLKYLKKERISGSEAITSHEMEWHKRIAYPFSVFILVFIAVVL---SSE 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--FCISSIFLLMIKK 356 R+ I I L I+ ++ F + + P + + ++L F + + ++ + Sbjct: 298 KRRGGIGGQIAIGLLIAV-IYIFFMQLGGVLVSIPIFSAFMAIWLPNFLFTILGFVLYIR 356 >gi|262382043|ref|ZP_06075181.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262297220|gb|EEY85150.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 361 Score = 96.2 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 47/353 (13%), Positives = 111/353 (31%), Gaps = 2/353 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 +K + YI++ +++ + I+ I+ V I ++I+ + L I++ IP Sbjct: 5 LKRIDWYIIKQFLGTYVFAIALIISISVVFDINEKIDKFLNPDVPLKAIIVDYYLNFIPY 64 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + +E++ + +G S L+ P A +++I FI Sbjct: 65 FANLFSPLFTFIAVIFFTSKLADRSEIIAMLASGMSFRRLMLPYAVSATIIAIVTFILNA 124 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 I P + + +N ++ + Y+ + + F ++ Sbjct: 125 YIIPPAN-ETRIDFQNKYIRNKKVDYVKNAQLEIEPGIIAYFDSYDARSNMGYRFSLEHF 183 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + + D + + + I+ K TL ++ V Sbjct: 184 EDKKLISRLTAKSIKYDSLYQWTVIDYMIRDFDGMREHITEGSRKDTTLTIVPSDFLISV 243 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L ++T++ E+HKR + I I + ++ Sbjct: 244 NDCETMTTPELNTYINRQKKRGIGNIQTFQIEYHKRFATIMAAFILTSIGASLSSRKIKG 303 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 I S +P + ++ +IFL Sbjct: 304 GMGMNIGIGLALSFSYILFMTVTSTFAINGYVSPAVAAWIPNIVYTFIAIFLY 356 >gi|299771879|ref|YP_003733905.1| hypothetical protein AOLE_18250 [Acinetobacter sp. DR1] gi|298701967|gb|ADI92532.1| hypothetical protein AOLE_18250 [Acinetobacter sp. DR1] Length = 356 Score = 96.2 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 44/356 (12%), Positives = 113/356 (31%), Gaps = 4/356 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y+ + + + + + + + L + + + L + P L Sbjct: 5 RIVAKYVTKTTALAMFGTTVVLSILQILFTYLGELGEL-KPDYNAWQALIYVLWGAPRYL 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L S+ ++EL+++ + G S ++ V+ A+LL I F + Sbjct: 64 YEILPISALIGAVIGLGSLATSSELIVMRSAGISLWRIVGWVMRSALLLIILSFALSEWV 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + +A + +Q + ++ Sbjct: 124 IPYTNEKAASVKSHRSVAALGEVKGYWSREGQRFIYIDYANSQGNLKDIQ--VVDFDQNY 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + AQ G D Q + ++ + + + +S +L + + L Sbjct: 182 YLQSLINAQQGQFVKDGQWALKKAQQMDILAAGNAIKTDHDEQSLSLALQPKYVHMVTLD 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 D + S L++ Y ++ +TY+ F +++ + L++ + Sbjct: 242 PEDLSPSQLISFMRYMDEY-SQVPKTYQLAFWQKVASPFSLIALVLVACSFIFGPLRQQS 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I + + +SF F + +L L + L+ + + Sbjct: 301 MGFRLVIALFIGLSFYYLQDFLGYASLVYAPSPAWFVLVPILLMFGAGSYLLYRAR 356 >gi|289209274|ref|YP_003461340.1| permease YjgP/YjgQ family protein [Thioalkalivibrio sp. K90mix] gi|288944905|gb|ADC72604.1| permease YjgP/YjgQ family protein [Thioalkalivibrio sp. K90mix] Length = 386 Score = 96.2 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 44/367 (11%), Positives = 119/367 (32%), Gaps = 18/367 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 ++ E +I R + + + ++ + + + + V+ ++ L + + Sbjct: 18 LRRAERFIARELWLTQAAVSVVLLLVIIGGVLARVLRDVAEGRLPVDFLPGMVAFGAFKG 77 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + V M R++E+ + +G S L + + ++A +I L + + Sbjct: 78 IVFLWPVALFLAFMLVFGRMQRDSEMTALQASGMSFAALYRALFWVAAPAAILLLVLMTM 137 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ + I QL A+ + F R + ++ + + + R+ Sbjct: 138 VVPRTEAQIDQLRDLAEQRSDLVGIAPGRFLRSRVGDQVFFAERMSADREALLEVFIYRE 197 Query: 181 TQTHKIYYAQSGSIDL----DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 ++ ++L +G + P + +++F+ Q + Sbjct: 198 VDGEAQITVAERAVPDPGAEGSGFLLLENGYRYVGEPGTASFRMLEFERLRTQITEPDPG 257 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 T N Q L R+E RL L ++ ++A Sbjct: 258 TRRASLNAQPTPALW---------AQRDDPEARAELEWRLAMPLSILVLA---LLALPLA 305 Query: 297 ALVRQRKKIHPIFISLSISFGV--FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + + + I ++ + F + P + + + + +L Sbjct: 306 QVPPRTGRYARIPAAIGVYVLYANFLILGQGQLADGRTPLALGLWWAHGLMLVLWVVLAW 365 Query: 355 KKKYTKI 361 K ++ Sbjct: 366 HKGLLRL 372 >gi|226227978|ref|YP_002762084.1| hypothetical protein GAU_2572 [Gemmatimonas aurantiaca T-27] gi|226091169|dbj|BAH39614.1| hypothetical protein [Gemmatimonas aurantiaca T-27] Length = 578 Score = 96.2 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 44/286 (15%), Positives = 94/286 (32%), Gaps = 12/286 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y++R + + + + + + +++ ++ + + + +P Sbjct: 1 MKLLTRYVIREHIGPLVFALSALTSLLMLQYVARQLANLAGKGLPWSAIGQFFVLSLPFT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + T M E+ +G T++ PVLF A+LLS+F+ + Sbjct: 61 VAMTLPMAVLVATLYAFGRMAAEHEITAFKASGVRVRTMMLPVLFCALLLSLFMVWFNDQ 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKI-SKYNPNNTLQGIFIVDSR 179 + P + L L + + D ++++ N + + I D Sbjct: 121 VLPAANHRLSMLQRDIARTKPTLALRDQALNAITDQFFMRVARTDAETNRMYDVVIYDLS 180 Query: 180 DTQTHKIYYAQSGSI----DLDRQAIILNDGEVHRKSPIS-KDISIMKFKSYTLQT---- 230 Q K YA SG + + L DG + F+S ++ Sbjct: 181 RGQERKTIYADSGVFAPAPNNRDLQLTLYDGFAQEFVRGDPRQFQRSYFQSQVIRQAGMT 240 Query: 231 --ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHK 274 A++S + + L + + Y S + Sbjct: 241 QGFEASNSDGYKGDREMTVCELHRKYIADAVEVERVRLEYVSNAQQ 286 Score = 57.7 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 16/107 (14%), Positives = 39/107 (36%), Gaps = 6/107 (5%) Query: 252 NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFIS 311 N + + E L++ E HK+ ++F L A + I +S Sbjct: 436 NASGTQLVAQREGLDSLAVEIHKKFALSFACLVFVLFGPPIAL---RFPRGGVGVTIGVS 492 Query: 312 LSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--FCISSIFLLMIKK 356 + I FG+++ + + +++ + + L+M+ + Sbjct: 493 I-IVFGLYYVCLMGGEALADKGRLPAYVAMWIANVIFTLVALVMLWR 538 >gi|257454352|ref|ZP_05619615.1| permease YjgP/YjgQ family protein [Enhydrobacter aerosaccus SK60] gi|257448255|gb|EEV23235.1| permease YjgP/YjgQ family protein [Enhydrobacter aerosaccus SK60] Length = 385 Score = 96.2 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 59/366 (16%), Positives = 123/366 (33%), Gaps = 23/366 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + + + LF++ + ++++ + + + +L I GY IPT L Sbjct: 10 ILRRYMTQQVAANTAIVLLFLMALMLGGRLIRYFGIAAEGRLDVGLLFAIIGYNIPTFLE 69 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + VL M + E+ ++ +G SR L + ++ L L IF + + Sbjct: 70 LILPLSFFIALMLVLGRMYVDQEMSVLFASGISRGRLTRLMIPLITGLFIFQMGISLLAK 129 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT- 181 P S KQ+ L + F + L+ +++V + Sbjct: 130 PWGLSNSKQIWQTQSLGSLLDLVRPKTFISSGNYHLYVDEFNKEKRELKNLYVVQQQTDK 189 Query: 182 -----QTHKIYYAQSGS-----IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 + I A + L G + + + F+ Y + E Sbjct: 190 SGKIAKNDVIITATRAYQVPSKDTDSSMQLDLFQGRRYELGTNNAKYNQASFEKYRITLE 249 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 S TI + + L + P ++E R T +I +++ Sbjct: 250 KPASETITETNVETQTTAKLLAHTQKP--------EVKAELGYRFTMPWLIIIAAMLATP 301 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 A R + ++ P + + I K + Y Y++L F Sbjct: 302 LAQVRPRQGRWLRLLPSVLIFASCAISIISLRTAIGKERISEY----AYIWLIVGFIAFA 357 Query: 352 LMIKKK 357 L++ + Sbjct: 358 LLLNWQ 363 >gi|189485654|ref|YP_001956595.1| permease YjgP/YjgQ family protein [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287613|dbj|BAG14134.1| permease YjgP/YjgQ family protein [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 384 Score = 96.2 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 57/376 (15%), Positives = 114/376 (30%), Gaps = 25/376 (6%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K LY ++ SFL+ + + + + ++L S S ++LK+ + +P +L Sbjct: 3 KKLHLYTIKESFGSFLLGVAVFSILFILDYVFELVDLFLSKGVSFFLVLKLFAFALPNIL 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P ++ + E+ + ++G + TL P++ L ++S FL + + Sbjct: 63 RLAIPMSVLFGILIAYGKLSEDNEITAMKSSGVNYRTLSLPIIILVCIISSFLLFFNHFL 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P S L + E L + NNTL + I + Sbjct: 123 SPAMNSNFVNLYREILTKKPLIKFTEKTTIELGEYRLYANKVNRKNNTLYEVSIYKFENK 182 Query: 182 QTHKIYYAQSGSI------------------------DLDRQAIILNDGEVHRKSPIS-K 216 + Y S + + DG + + Sbjct: 183 DDYCYGYNDEKSDKKSLFLQNNSKAWRIAASSAKVKSYQNGTQFFIYDGYWQKANFSDIN 242 Query: 217 DISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRL 276 +++ M FKSY S+ + + S + + EF R Sbjct: 243 NMTHMTFKSYCFFIPSSEVMKEQTLSMSEKSSPEILKTIKTCKEQDIPFTANEIEFWIRW 302 Query: 277 TQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 L P+ F LI++ + + + + + + K I Sbjct: 303 IYALAPISFVLIALPIGIMAGKDGKTIGFGMSLSIILVYYMLLILALILSEKEYVPANLI 362 Query: 337 PILYLFLFCISSIFLL 352 L + I L Sbjct: 363 MWLPNITVTAAGICLF 378 >gi|209519258|ref|ZP_03268060.1| permease YjgP/YjgQ family protein [Burkholderia sp. H160] gi|209500338|gb|EEA00392.1| permease YjgP/YjgQ family protein [Burkholderia sp. H160] Length = 365 Score = 96.2 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 53/362 (14%), Positives = 120/362 (33%), Gaps = 16/362 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ + +++ + +S +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTLVLTTMMIRIVGFAASGEIDPRDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT +++E+++ ++G S IKP+ A + I + + Sbjct: 62 IMLVATLFVSILFVLTRWYKDSEMVVWLSSGVSLARFIKPIGIFATPIIILIMFFVFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P K + A+ Q S L F + + + + + Sbjct: 122 PWSNQQSKLIRARFQQRDEVSLLAPGQFRESPTTHRVFFIEKMSPDQGHVENVFVTSTEG 181 Query: 183 THKIYYAQSG----SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + ++L +G + P D IM+F+ Y ++ +S Sbjct: 182 GKVNVVVSKNGHIETHKNGDRFVVLENGRRYDGEPGHPDFRIMEFERYGVKIQSQPVVNT 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD-KRA 297 ++ L NP N +EF R L + L++I A Sbjct: 242 PTTTGLPTMTLLRNPTNENL-----------AEFAWRAGLPLIAINLMLLAIPLAHQNPR 290 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 R + + I L+ S + ++I + IL++ + I + + + Sbjct: 291 RSRTINLVMAVLIYLTYSNLLNVVQAWIEQGKMSFGVGLVILHVIVLGIVAFIFWLRVRN 350 Query: 358 YT 359 Sbjct: 351 RP 352 >gi|307566072|ref|ZP_07628530.1| conserved hypothetical protein [Prevotella amnii CRIS 21A-A] gi|307345260|gb|EFN90639.1| conserved hypothetical protein [Prevotella amnii CRIS 21A-A] Length = 427 Score = 96.2 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 45/352 (12%), Positives = 110/352 (31%), Gaps = 4/352 (1%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPTVL 61 + YI++ ++L + L I+ I+ V + ++ + I+ IP Sbjct: 69 RLDWYIIKKFIGTYLFAILLIISISIVFDFNENLSKFTQYHAPWRAIIFDYYANFIPYYS 128 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + +P + + + N+E++ + G S L++P + I++S F + + Sbjct: 129 NLFSPLFVFIAVIFFTSKLASNSEIIAMLAAGVSFKRLMRPYMISCIVISALTFYLNSFV 188 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + + + E + + + G + + Sbjct: 189 IPHGTVIRQNFESLYRNNKKNTSAENVQLKVAKNTVAYIQYFDDHYKRGYGFSLAKFENK 248 Query: 182 QTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + A D + +++ ++ + + + I+ K L E + Sbjct: 249 KLVSHMTAMEIQYDTVADTKYHWKVSNYKIRQLKGLKEHITTGDEKDTILLMEPTDLVYS 308 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + LLN + + Y EFHKR+ I +I + + ++ Sbjct: 309 KGQQETFTSPELLNYISKQNSRGLSNVVQYEVEFHKRIAMSFSAFILTIIGLSLSARKRK 368 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 + + + K P + F+F + F Sbjct: 369 GGMGLYLGIGLGLSFSYILLQTVSATFAIKANTPPILAAWIPNFIFVFIAYF 420 >gi|149927923|ref|ZP_01916173.1| hypothetical protein LMED105_07563 [Limnobacter sp. MED105] gi|149823362|gb|EDM82595.1| hypothetical protein LMED105_07563 [Limnobacter sp. MED105] Length = 379 Score = 96.2 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 42/353 (11%), Positives = 120/353 (33%), Gaps = 18/353 (5%) Query: 10 RCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCF 69 + ++ + + + I +++ + + + + LP Sbjct: 9 KDFAQTAGATFVALFTIIVTTVLVRTLGQAAGGKVDNAEVFTLILLGGLQYLPAALVITV 68 Query: 70 AMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTI 129 + V++ + E+ +G S +L++PVL A+ L++ + + P ++ + Sbjct: 69 FIAVMGVVSRAFKEQEMTAWFASGVSLFSLVRPVLRFAVPLTVLALVCSVWLTPWAKAEL 128 Query: 130 KQLSAKAQLALTFSYLEENLFFRLDD-DLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYY 188 + S + F + + + + + V T + Sbjct: 129 DAAKDRFAKRSDVSKVSAGQFRESGEGNRVFFVERQSEVTKQVENVFVVDSKGDTRTVVS 188 Query: 189 AQSGSIDLD---RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQ 245 A GS+++D + ++L+ G + + +F++Y L ++ + + + Sbjct: 189 AARGSVEVDASGQPYLVLSGGRRATLDGTGERFTSTEFETYGLAIDNTLGAAPSFQLQHR 248 Query: 246 NLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKI 305 + L+ + + E R++ + ++ GL++I A + + Sbjct: 249 RVDLLI----------ADFSPAAQGELLWRVSLPMSALVLGLLAIPLAF---VNPRGGNS 295 Query: 306 HPIFISLSISFGVFWGFSYIIHKI-EQNPYYIPILYLFLFCISSIFLLMIKKK 357 +L I S + ++ + L L + +F L++ K+ Sbjct: 296 LNQLFALLIYLTYSNIVSVTQSMVTKETLDFWVALVLPHASVLLMFYLLMVKR 348 >gi|260771005|ref|ZP_05879934.1| predicted permease [Vibrio furnissii CIP 102972] gi|260614242|gb|EEX39432.1| predicted permease [Vibrio furnissii CIP 102972] Length = 347 Score = 96.2 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 43/338 (12%), Positives = 115/338 (34%), Gaps = 19/338 (5%) Query: 22 FIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMN 81 + + + ++ + S ++L I G +P + ++ P + + Sbjct: 1 MLFLVFLSQKFIRVLADASDGEIPARLILSIVGLNMPAMGLLMLPLSLYIGILLTFGRLY 60 Query: 82 RNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALT 141 +E+ +++ TG LI+ L+L ++ S + + P + ++ + + + Sbjct: 61 AESEITVMNATGIGNKFLIRAALYLGVITSCLAGFNALWLSPWSQDKVQSVMEQLAAENS 120 Query: 142 FSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ--THKIYYAQSG---SIDL 196 L++ F R D + N L +F+ + + ++ +G + Sbjct: 121 VDLLQKGQFQRSPDGSSVVFIDNIENKKLSNVFVAQLTPRESILPSVMFSDAGDVKELSD 180 Query: 197 DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPN 256 RQ I + +G + P D + KF Y L+ Sbjct: 181 GRQVITMYNGTRYEGVPTRVDYMVTKFDEYEGLIGQRAVKEKGRDWEAIPTLELI----- 235 Query: 257 NPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISF 316 + ++E R++ V L++++ A+ ++ + + ++ I Sbjct: 236 -----KNADRSAQAELQWRISL---VVCIPLLTMLVVPLSAVNPRQGRFAKMGPAILIYL 287 Query: 317 GVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 F S + ++ I+ ++ + + +I Sbjct: 288 TYFLAISATKSAL-EDGSIPAIVGMWPINAALLISAII 324 >gi|254282226|ref|ZP_04957194.1| queuine tRNA-ribosyltransferase [gamma proteobacterium NOR51-B] gi|219678429|gb|EED34778.1| queuine tRNA-ribosyltransferase [gamma proteobacterium NOR51-B] Length = 389 Score = 96.2 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 47/367 (12%), Positives = 123/367 (33%), Gaps = 20/367 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M++ Y+ I L + + + + + ++ + + + +ILL + + +P+ Sbjct: 28 MRTL-KYLTGDILAHALAVSVVLFLVVFSGRFIRYLAEAAVGAITSDILLPVMLFKLPSF 86 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + L + ++EL+++ G L +L A+ S+ + Sbjct: 87 FELILPLGLFIGILLSLGRLYADSELVVLKACGVGPGKLATYLLLPALAFSLVVGFLSLY 146 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ + + + + A L E F + ++ ++ ++ + V + Sbjct: 147 LAPEGSARAQAMLDNPRSAEGLQQLSEGRFKKQRSGNFVSYAETISDDGVMHNIFVVEKS 206 Query: 181 TQTHKIYYAQSGSI-------DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 + R+ + L DG + P D ++ KFK Y Sbjct: 207 EAGTARTRVTYADAGEVVVDPENGRRYLELRDGARYEGVPGQADYTVTKFKRYGELIPER 266 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 D + LL + + ++ + R + + + LI++ Sbjct: 267 EGGIRDNLKTDAISTRLLLSDF---------SPSAQAALYWRFSLPVLVPVISLIALPL- 316 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 +R + + +L + F G + +E + + L +L Sbjct: 317 --SRTDARRGRYAKLAPALLVFLAYFIGLTQARTAVESGDSGWWFVGVHLIFTLLAVVLT 374 Query: 354 IKKKYTK 360 ++ +K Sbjct: 375 FWEQLSK 381 >gi|254456522|ref|ZP_05069951.1| putative permease, YjgP/YjgQ family [Candidatus Pelagibacter sp. HTCC7211] gi|207083524|gb|EDZ60950.1| putative permease, YjgP/YjgQ family [Candidatus Pelagibacter sp. HTCC7211] Length = 362 Score = 96.2 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 56/360 (15%), Positives = 128/360 (35%), Gaps = 16/360 (4%) Query: 13 GRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAME 72 FL++ + + WV Q + ++++ S ++ + S P ++ + PF Sbjct: 1 MSFFLIALISAGIVIWVFQAVNFLDIMIEDGRSYSVYISYSLLNFPKIINKLFPFILFFS 60 Query: 73 TTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQL 132 V N EL+I N G ++I LI + +++L + I II PK + + Sbjct: 61 LFYVTIKYENNNELIIFWNFGINKIQLINFIFKFSVILMLIQLIFSAIIVPKSQDLARSF 120 Query: 133 SAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSG 192 + + ++++ F ++ I + + + L +++ + +I YA+ G Sbjct: 121 LRSSTVNFYENFIKPKRFNDTIKNVTIFSERKDIDGNLYNLYLKKEINENNFQITYAKKG 180 Query: 193 SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST--IVLKANDQNLSFL 250 +L + + +I+ F + +++ K + + L Sbjct: 181 YFKEFNNLPVLVLFNGETITSKNNEITNFSFSKSDFPINNTETNSFVTQQKTQELSSYNL 240 Query: 251 LNP------------NPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 L +P N + E +KR ++ ++ LI ++ Sbjct: 241 LKCVKFLIPTKKNKLDPKIINCSERNKDNIFKELYKRFIIPIYILVLTLIPLLVTILSKE 300 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + ++ I + + F +F I I + + L F L+ KK+ Sbjct: 301 DSKYSRLKFIAFLIGLFFIIFS--ETTIRLISDSIIKNISISLLPFIFIITLYLIFLKKF 358 >gi|157965014|ref|YP_001499838.1| putative permease [Rickettsia massiliae MTU5] gi|157844790|gb|ABV85291.1| Putative permease [Rickettsia massiliae MTU5] Length = 370 Score = 96.2 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 63/361 (17%), Positives = 153/361 (42%), Gaps = 11/361 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y ++ I ++ + I W+ QIL+ + L + + ++PT+L Sbjct: 13 LYRKYFIKNILPLLIVVTFSVTSIVWITQILKLLYLF-DKGIKVMDFFSLIVLVLPTLLF 71 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + ++ +L+I+ +G + L P L++A+++ + + + I Sbjct: 72 ILLPVITVITVIYIYNNLKVERQLIILQASGVDNVQLALPALYVALIVMLLAYYISSTIL 131 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +K + S +EE F ++ D+ + I K + N + G+ I D+R+ Sbjct: 132 PLSHINLKSRLNFIKNNYISSMIEEKTFNKVTKDITVFIDKKSAGNIMNGVIIFDNRNAD 191 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPI-SKDISIMKFKSYTLQTESANS-----S 236 + +A SG++++ + I + R+ + +++ + F S ++ ++ N + Sbjct: 192 NPSVVFAGSGTLNIYDNSPIFELNKGRRQEYDVNGNLTQLTFDSLMIKLQNDNPLVSQRT 251 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 +AN+ +S LL P + + +E H+R+ L+ + +++ + Sbjct: 252 KHNKEANEYYISELLAPPHDLAITKKI---KLIAEAHQRIIWPLYNFVLPFVTLAVFLRY 308 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 ++ + +F +L I V + + +N +I Y L +I L + + Sbjct: 309 PYSKKTTFMPVLFSAL-IVLLVTSIHFILQNFASKNLDFIFACYFNLVIALTIGLYLFVR 367 Query: 357 K 357 K Sbjct: 368 K 368 >gi|262373935|ref|ZP_06067212.1| permease YjgP/YjgQ family protein [Acinetobacter junii SH205] gi|262310946|gb|EEY92033.1| permease YjgP/YjgQ family protein [Acinetobacter junii SH205] Length = 356 Score = 96.2 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 42/356 (11%), Positives = 114/356 (32%), Gaps = 4/356 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + ++ + + L + L + F+ + L + + + + P L Sbjct: 5 RIVAKHVTKTTVLAMLGTTLVLSFLQVLFTYLGELGSL-KPNYNAWQAFLYVMWGAPRYL 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + + L ++ N+EL+++ + G S ++ V+ A+LL + F+ + Sbjct: 64 YEILPVAALIGSVLGLGALASNSELIVMRSVGISLWRIVGWVMRSALLLIVLSFVLSEWV 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + + +A + +Q I ++ Sbjct: 124 IPYTNEKAQSIKKQRSVATLGEVKGYWSREGQRFTYIDYANSQGQLRNIQS--IDFDQNY 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + A+ G D Q + + +V + + + ++ L + + L Sbjct: 182 RLQSFITAEKGQFVKDGQWTLQDSHQVDLLAQGNAIKTDHAQQALGLALQPKYVHMVTLD 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 D + S L++ Y ++ ++Y F ++++ + LI+ + Sbjct: 242 PEDLSPSQLVSFMRYLEEY-SQVPKSYELAFWQKVSSPFALIALVLIACSFIFGPLRQQS 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I + + F F + +L + L+ + + Sbjct: 301 MGFRLVIALFTGLGFFYLQDFLGYASLVYAPSPAWFVLLPIMLMFGIGSYLLYRAR 356 >gi|226951740|ref|ZP_03822204.1| permease YjgP/YjgQ-like protein [Acinetobacter sp. ATCC 27244] gi|294648982|ref|ZP_06726430.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] gi|226837530|gb|EEH69913.1| permease YjgP/YjgQ-like protein [Acinetobacter sp. ATCC 27244] gi|292825117|gb|EFF83872.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] Length = 356 Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 40/356 (11%), Positives = 110/356 (30%), Gaps = 4/356 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + ++ + + L + L + F+ + L + + + + P L Sbjct: 5 RIVAKHVTKTTVLAMLGTTLVLSFLQVLFTYLGELGSL-KPNYNAWQAFLYVLWGAPRYL 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + + L ++ N+EL+++ + G S ++ V+ A+LL + F + Sbjct: 64 YEILPVAALIGSVLGLGALASNSELIVMRSVGISLWRIVGWVMRSALLLIVLSFTLSEWV 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + + +A + +Q I + Sbjct: 124 IPYTNEKAQSIKKQRSVAALGEVKGYWSREGQRFTYIDYANSQGQLRNIQS--IDFDENY 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + A+ G+ D Q + ++ + + ++ L + + + Sbjct: 182 RLQSFVTAEQGNFVKDGQWTLEQSHQIDLLPQGNAIKTDHANQALALALQPKYVHMVTID 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 D + + L++ Y ++ +TY F +++ + LI+ + Sbjct: 242 PEDLSPTQLISFMRYMEEY-SQVPKTYELAFWQKVASPFALIALVLIACSFIFGPLRQQS 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I + + F F + +L + L+ + + Sbjct: 301 MGFRLVIALFTGLGFFYLQDFMGYASLVYAPSPAWFVLLPVVLMFMIGSYLLYRAR 356 >gi|15888447|ref|NP_354128.1| hypothetical protein Atu1107 [Agrobacterium tumefaciens str. C58] gi|15156139|gb|AAK86913.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58] Length = 362 Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 50/355 (14%), Positives = 114/355 (32%), Gaps = 12/355 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTV 60 + Y L+ + + L + I ++ + +S S+ L ++ +P + Sbjct: 4 NTLARYFLKRYLMTTIWFVLGVSSIIYLADFSETARRMSGLPGYSVPAALGLTALRLPLI 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L PF L S+NR EL++ G S I P + A+ + I + N Sbjct: 64 LQQTVPFIALFVGMTTLISLNRRYELVVTRAAGISAWQFILPFVLGAVFIGILSVMVLNP 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRL----DDDLYIKISKYNPNNTLQGIFIV 176 I ++ + A + +E + + D I + N T+ ++ Sbjct: 124 IAAWGQNKSLAMEAGLRNDAGGGRQQEIIPWMRQSSGGKDTIIGAKSFEDNGTMLLDVVL 183 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 D + + + S L+ +LN R + + Sbjct: 184 IDVDKDGNIVSRKDAKSAKLEDGYWLLNGVSETR---AGHVPVRQESMQISTNLRREFVQ 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + L + ++ + +++H L+ L V LI+ + Sbjct: 241 ERMTQTETVAFFDLSHKIEVAKSF-GLSSKALETQYHFLLSTPLLLVAMTLIAATVSL-- 297 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 R + I + F ++ + ++ P + +++ I ++ L Sbjct: 298 KFSRFAQSRSVILGGIVSGFVLYVV-TVLVRAFGSGGVVPPTVAVWVPVIVALAL 351 >gi|303258295|ref|ZP_07344302.1| permease YjgP/YjgQ [Burkholderiales bacterium 1_1_47] gi|302859048|gb|EFL82132.1| permease YjgP/YjgQ [Burkholderiales bacterium 1_1_47] Length = 378 Score = 95.8 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 45/379 (11%), Positives = 123/379 (32%), Gaps = 24/379 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK I I +S L L +V + ++ + + +S S+ ++ ++PT Sbjct: 1 MKIVSRMIFAQIMKSSLFVLLTLVALFAFFDLIGQSGNIGTS-YSMGQAFLLTALILPTR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 V P + + L+ + ++ ++ +G +L I+L I ++ N+ Sbjct: 60 CYEVLPIAVMLGSIFTLSRLASTSQFTVLRVSGIGPWRFCGMLLMPGIVLVICAYLLGNL 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL----------YIKISKYNPNNTL 170 + P + K+ + ++ + D ++ + + P Sbjct: 120 VAPPAQRLAKEFKLDISGSAFTGKELDSGIWVRDVQRNEAGEPKKISFVNVQRLRPGEAA 179 Query: 171 QGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDG----------EVHRKSPISKDISI 220 + +++ +L+D E ++ + + Sbjct: 180 YDWVVYVFDRPDHLTSIVTAKSGTYSEQEGWVLHDVVEETVPTLPKESREQTQARVERKV 239 Query: 221 MKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWL 280 MK + + +++K D +L L + + + + + F + L Sbjct: 240 MKSMVWGKSLDGNIFGLLMIKPEDMSLQEL-HYYIEYLKENGQTYKRFDTAFWSKAFYPL 298 Query: 281 FPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY 340 ++ L+S+ A + A I + I + + ++ P I + Sbjct: 299 AILVMLLLSMPFAYQNARAGGMAIKIFCGIMIGIFYYALNNLFAFMSALDSVPSIISAIL 358 Query: 341 LFLF--CISSIFLLMIKKK 357 + + I + ++++ Sbjct: 359 PSVMMTLAAIIAMWYVERR 377 >gi|53713591|ref|YP_099583.1| hypothetical protein BF2302 [Bacteroides fragilis YCH46] gi|60681871|ref|YP_212015.1| hypothetical protein BF2391 [Bacteroides fragilis NCTC 9343] gi|253565580|ref|ZP_04843035.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|52216456|dbj|BAD49049.1| conserved hypothetical protein [Bacteroides fragilis YCH46] gi|60493305|emb|CAH08089.1| putative membrane protein [Bacteroides fragilis NCTC 9343] gi|251945859|gb|EES86266.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|301163363|emb|CBW22913.1| putative membrane protein [Bacteroides fragilis 638R] Length = 365 Score = 95.8 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 48/362 (13%), Positives = 123/362 (33%), Gaps = 7/362 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPTV 60 K +LYI++ +++ + I+ IA V ++++ + + I+ IP Sbjct: 8 KRLDLYIIKKFLGTYVFAIALIISIAVVFDFNEKMDKFMERSAPWSAIIFDYYMNFIPYF 67 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +P + + + N+E++ + +TG S +++P + A +++I FI + Sbjct: 68 ANLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMLRPYMISAGIIAISTFILGSY 127 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ T K +Y+ + + + N T + D Sbjct: 128 VIPRGSVTRLDFEDKYVKKKKTTYVHNIQLEIDTGVIAYIDNYQDYNKTGNRFSLDKFVD 187 Query: 181 TQTHKIYYAQSGSIDLDR-QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + A+S + D + D + + + I + E A+ + Sbjct: 188 KKLVSHLTARSITYDTTAVNKWTIKDYMIRNLDGLKETIVRGDKMDSIIPMEPADFMIMR 247 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + L ++ + E+HKR+ I +I + + Sbjct: 248 NQQEMLTSPQLSAYIDKQKQRGIANIKEFEIEYHKRIAMSFASFILTVIGVSL----SSR 303 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF-CISSIFLLMIKKKY 358 + + + + F + N P++ +++ + ++ + +K Sbjct: 304 KTKGGMGLHLGIGLGLSFSYILFQTVASTFAVNGNMPPMIAMWIPNLLYALIAFYLYRKA 363 Query: 359 TK 360 K Sbjct: 364 PK 365 >gi|323525104|ref|YP_004227257.1| permease YjgP/YjgQ family protein [Burkholderia sp. CCGE1001] gi|323382106|gb|ADX54197.1| permease YjgP/YjgQ family protein [Burkholderia sp. CCGE1001] Length = 365 Score = 95.8 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 55/362 (15%), Positives = 120/362 (33%), Gaps = 16/362 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ + +++ + + +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTLVLTTMMIRIVGFAAQGEIDPRDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT +++E+++ ++G S IKP+ A + I + + Sbjct: 62 IMLVATLFVSILFVLTRWYKDSEMVVWLSSGVSLTQFIKPIGMFATPIVILIMFFVFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P K + A+ Q S L F + + + + + Sbjct: 122 PWSNQQSKLIRARFQQRDEVSLLAPGQFRESASTHRVFFIEKMSPDQGHVENVFVTSTEN 181 Query: 183 THKIYYA----QSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + + ++L +G + P D IM+F+ Y ++ ES Sbjct: 182 GKVNVVVSKNGHTETHKNGDRFVVLENGRRYEGEPGHPDFRIMEFERYGVKIESQPVVNT 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD-KRA 297 L+ L NP N +EF R L + L++I A Sbjct: 242 PTTTGTPTLTLLRNPTNENL-----------AEFAWRAGLPLIAINLMLLAIPLAHQNPR 290 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 R + + I L+ S + S+I + IL++ + I + + + Sbjct: 291 RSRTINLVMAVLIYLTYSNLLNVVQSWIEQGKMSFGVGLVILHVIVAGIVAFIFWLRVRN 350 Query: 358 YT 359 Sbjct: 351 RP 352 >gi|323137698|ref|ZP_08072774.1| permease YjgP/YjgQ family protein [Methylocystis sp. ATCC 49242] gi|322396995|gb|EFX99520.1| permease YjgP/YjgQ family protein [Methylocystis sp. ATCC 49242] Length = 361 Score = 95.8 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 40/352 (11%), Positives = 100/352 (28%), Gaps = 9/352 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTE-SLNILLKISGYLIPTVL 61 + Y R+ L I + +V+ ++ + S + + ++ ++ +P Sbjct: 5 TITRYFAWRFMRTILAIFFTIFCLMFVVVFVEMLRRASDNPQAGAGMVALMTAMKVPAAA 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M+ PF + + R EL++ G S I P + A+L+ +F N + Sbjct: 65 EMILPFAVLFGSMATFVDLTRKLELIVARAAGMSVWQFITPPVLTALLIGVFSVAVYNPL 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEE--NLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + Q+ + ++ L D L + + + F+ + Sbjct: 125 SASMKQRSDQMELELFGVPGSLRIDHGVWLRQHGVDGLAVMHAMGTAKGGTELTFVSVNI 184 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + + +G + S + + ++ Sbjct: 185 YSPNGGFLERVEAQSARLEPGVWVLNGAI--VSAPGEPARPVASYMLATDLTPEQAAAAT 242 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L + YR +F L + L V L++ + Sbjct: 243 TPPQGTPFWELPEMTARTTEAGLDSTG-YRLQFQTLLARPLLLVAMVLVAASFSL--RFF 299 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 R + ++ F ++ + P++ + + L Sbjct: 300 RFGGVAKTLSGGVAAGFVLYIVTKVLSDLGGA-GLISPLVAAWSPALVGSML 350 >gi|262376977|ref|ZP_06070203.1| permease YjgP/YjgQ family protein [Acinetobacter lwoffii SH145] gi|262308015|gb|EEY89152.1| permease YjgP/YjgQ family protein [Acinetobacter lwoffii SH145] Length = 356 Score = 95.8 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 42/355 (11%), Positives = 111/355 (31%), Gaps = 5/355 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + ++ + + L + + + + L + + LK + P L Sbjct: 5 RIVAKHVTQTTALAMLGATAVLAGLQVLFTYLGELGSL-KDGYGAWDALKYVLWGAPNYL 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ N+EL+++ + G S ++ V+ A+LL + F + Sbjct: 64 YEILPISALIGAVLGLGTLASNSELIVMRSVGVSLWRIVGWVIRSALLLVVLSFALSEWV 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P K + + ++ A + +Q + ++ Sbjct: 124 IPYTNEQAKSVKSASKAAQLGEVRGYWTREGQRFIYIDYANSQGQLKNVQ--MLDFDQNY 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + A G D + N + + + + + L + + + Sbjct: 182 RLRGTLQADQGQFVKDGSWTLDNTEQFDILQNGNATLVKQQQQPLALALQPKYVHMVTID 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 D + S L++ Y ++ +TY+ F ++L + +I+ + Sbjct: 242 PEDLSPSQLVSFMSYMHEY-SQVPKTYQLAFWQKLGSPFALIALVVIACSFIFGPLRQQS 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 I + + F F I P +++ + + I ++ + Sbjct: 301 MGFRLVIALFAGLGFFYLQDFLGYASLIYA-PSPAWFVFIPILIMFGIGGYLLHR 354 >gi|182677644|ref|YP_001831790.1| permease YjgP/YjgQ family protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182633527|gb|ACB94301.1| permease YjgP/YjgQ family protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 362 Score = 95.8 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 47/352 (13%), Positives = 100/352 (28%), Gaps = 4/352 (1%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTVL 61 + Y+ L I + +VI +++ + + + +++ +S P+V Sbjct: 6 TLGRYLSSRFLFMILAVFGTIFSMIYVIDLVEMLRRAGNRPGATASLIAFLSFLRAPSVS 65 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PFC T ++ R ELL+ G S L+ P L +A+ + IF N I Sbjct: 66 EQILPFCVLFGTMATFINLTRRLELLVARAAGISIWQLMMPPLGIALAIGIFSVTLYNPI 125 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 + + + + + L+ R + I + + T Sbjct: 126 SAMMKHRADGIETELFGGIGGQETKGGLWIRQNSVDGQAIIRAETVEAGGSRLGGVTLYT 185 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + + + R ++I S ++ Sbjct: 186 YGKDGSFEARIEARHAKLVPGVWQMTEARIIVPGEEIQEAGLYLLATNLTPGEVSENIVT 245 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 L + YR +F L + LF + LI+ + R Sbjct: 246 PESVPFWELQS-FRAATELAGLDSTRYRLQFQLLLARPLFFIAMVLIAAAFSL--RFFRF 302 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + F ++ + PI ++S+ + Sbjct: 303 GGITKMVCGGAGAGFVLYIVSKFTGDLGTSGLLSAPIAAWSPAVVASMLGAL 354 >gi|332290237|ref|YP_004421089.1| putative permease YjgP/YjgQ family [Gallibacterium anatis UMN179] gi|330433133|gb|AEC18192.1| putative permease YjgP/YjgQ family [Gallibacterium anatis UMN179] Length = 363 Score = 95.8 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 55/354 (15%), Positives = 127/354 (35%), Gaps = 15/354 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ +S L ++ I Q+++ + + ++++L + G +PT+ Sbjct: 2 ILTKYLIKETLKSQLAILFILLVIFLAQQLVRVLGSAVNGNVPVDVILPLLGLGMPTMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G L+K L L+I+ + + + Sbjct: 62 LMLPLSLFLALLLTLGRLYSESEITVMQACGIGPNALVKVGLILSIVTAAIAAYNSLYLT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+ + S + F ++ ++ + L I++ +R Sbjct: 122 PWALKKQVEVVENAKANPSASAITPGQFISSNNGNFVLFVDKVKGDQLSDIYLFQTRQVG 181 Query: 183 --THKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G+ Q + L +GE S + + + F+ Y + Sbjct: 182 KVKPSVIVAEQGNFSTAKDGSQTLALKNGERFEGSAVLPEFRVTHFQDYLAFLAFNPAKA 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + Q+ + LL ++E R++ +L + LI+I + Sbjct: 242 EEADLDMQDSNALL----------KNSSANAKAELQWRISLFLAVPLMMLIAIPLSKVNP 291 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + KI P + I F + + +Y IL LF + I L Sbjct: 292 RQGRFAKIIPALLLYLIYFLLQSSLKTAGINGKIESHYWMILVNMLFLLLGIIL 345 >gi|75675870|ref|YP_318291.1| permease YjgP/YjgQ [Nitrobacter winogradskyi Nb-255] gi|74420740|gb|ABA04939.1| permease YjgP/YjgQ [Nitrobacter winogradskyi Nb-255] Length = 365 Score = 95.8 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 51/360 (14%), Positives = 107/360 (29%), Gaps = 15/360 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTV 60 + Y + L I + ++ ++ + S ++ S ++ + S + +P + Sbjct: 6 NTLGRYFAGRFMVAALGVFASIFLLLVLVDYIEMVRRTSGLASASALMVAETSLFRVPQL 65 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L +TPFC + +++R EL++ G S I P L AI L +F N Sbjct: 66 LEKLTPFCVLIGAMTCYLALSRKLELVVARAAGVSAWQFISPTLACAIALGVFATTVYNP 125 Query: 121 IEPKCRSTIKQLSAKAQLA------LTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF 174 + R K++ A+ S N + L G+ Sbjct: 126 LSSNLRELSKRMEAEMFGGASGGGLHDASGFWINQVTDDGQAIINAALSEQQGVRLTGLT 185 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + + + D + L G R + + + F T A Sbjct: 186 VFRFDPDSRFRERIEAREAALEDGRW--LFKGV-RRFTLDNPPVEQETFVLPT-SLTPAQ 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + L + + YR ++HK + Q +++ + Sbjct: 242 VQNSFSTPETVSFWQLPD-YIRSSESSGFATAGYRLQYHKLIAQPFLLAAMVMLAASVSL 300 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R + + F ++ S + + + PI +L + Sbjct: 301 --RFFRFGGVQKMVLSGVGSGFLLY-VLSKVTEDLSKAELMNPIAAAWLPVCVGGLTGFL 357 >gi|91788271|ref|YP_549223.1| permease YjgP/YjgQ [Polaromonas sp. JS666] gi|91697496|gb|ABE44325.1| permease YjgP/YjgQ [Polaromonas sp. JS666] Length = 381 Score = 95.8 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 46/384 (11%), Positives = 119/384 (30%), Gaps = 30/384 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSST--------ESLNILLKI 52 M++ I + + + L + + + ++ + + + + L Sbjct: 1 MRTIRRLIYGEVLTAIALVALGFLALFFFFDLVDELQYLGKNNGLSAAADIYQIRHALLY 60 Query: 53 SGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSI 112 LIP L + P + T V+ + +++E I+ +G ++ +L L Sbjct: 61 VALLIPNHLYELLPISVLIGTIFVMARLAQSSEYTILRTSGLGPWRALRLLLVLGAAFVT 120 Query: 113 FLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEEN-LFFRLDDDLYIKISKYNPNNTLQ 171 F + + P + L A+ Q +T + + + + + PNN ++ Sbjct: 121 LSFAVGDYVAPTSERAAQLLKARYQSKITVGQTGAWLKEKQPYNSYVVNVKELTPNNEMK 180 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRK-------------SPISKDI 218 G+ I + + + A +L + Sbjct: 181 GVQIFEFDNKGLIVSTTQAPVAQFTGGDAWMLKQASRAEFDVPASPADISKPQNGARVSR 240 Query: 219 SIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQ 278 + ++ + + + S +LK + L N + N + + Y EF K++ Sbjct: 241 TTLQTFRWPTEISAEMVSVALLKPERMSTLDLFN-YVRHLNANGQTAQRYEIEFWKKVFY 299 Query: 279 WLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 L ++ ++++ A R +F + I F + + + + Sbjct: 300 PLSCLVMVMLALPFAYL--HFRSGGIASYVFAGVMIGISFFLLNNVFGYIGNLRNWQPWL 357 Query: 339 LYLFL-----FCISSIFLLMIKKK 357 F ++ ++ Sbjct: 358 AAATPGLMYMAVSLGAFGWLVLRR 381 >gi|171059278|ref|YP_001791627.1| permease YjgP/YjgQ family protein [Leptothrix cholodnii SP-6] gi|170776723|gb|ACB34862.1| permease YjgP/YjgQ family protein [Leptothrix cholodnii SP-6] Length = 368 Score = 95.8 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 39/369 (10%), Positives = 107/369 (28%), Gaps = 13/369 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + + R I + + + + + I + + + +P Sbjct: 1 MHTIRRLLYREILGATGYVMVAFLGLFFFIDFMAELENIGQHGYGAAQAALACLLQVPGH 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + L + ++E I+ G + + +L + + F+ + Sbjct: 61 VYELAPIAVLIGAIYALARLAHSSEFTILRTGGLGPGLALLLLTWLGLGFAAITFVIGDF 120 Query: 121 IEPKCRSTIKQLSAKAQLALT-----FSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI 175 + P C + L A+A L+ + + + + + L+ + I Sbjct: 121 VAPWCDTQATLLQARASGNLSVASGGAWLKDSASAADGEHRYTVNFAAARSDGELEKVRI 180 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDI----SIMKFKSYTLQTE 231 + ++ D L D + + + + Sbjct: 181 FEFGPKGALITRTTAERAVIGDDGTWQLTDVRISHWTSDHTPRLDADEKLASHVWQSGLT 240 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 + VL + L N + + + Y +F K+ ++ +++ Sbjct: 241 RNVVAAAVLPLRTMSTLALYN-YMTHLADHEQAAQRYEIQFWKKALYPFACLVMMGLALP 299 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI---LYLFLFCISS 348 A + I L I F + S + ++ ++ +FL + Sbjct: 300 FAYLHGRSGGIGLMVFGGIMLGIGFVLLNNLSSHLGLLQNWTPWLAASAPSAIFLLLSLA 359 Query: 349 IFLLMIKKK 357 F +++ + Sbjct: 360 AFSWLVRYR 368 >gi|332885188|gb|EGK05439.1| hypothetical protein HMPREF9456_02640 [Dysgonomonas mossii DSM 22836] Length = 365 Score = 95.8 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 56/357 (15%), Positives = 125/357 (35%), Gaps = 11/357 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 + + YI++ +++ S + I+ I+ V I +R++ S+ L I+ +P Sbjct: 4 LSILDKYIIKKFLGTYIFSIILIISISVVFDINERLDKFLSNNAPLKAIVFDYYMNFVPY 63 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + + + + + N+E++ + + G S L+KP + A ++++ FI + Sbjct: 64 YTNLFSALFVFIAVIFFTSKLADNSEIIAMLSNGMSFKRLMKPYMISAGIIAVGSFILSS 123 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 I P T + K + ++D + + I +++ L +D Sbjct: 124 FIIPPANETRIKFQNKYIKDK-SVDYASRIQMQVDKGVILYIERFDNKTRLGYNLSLDKF 182 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + K S +LN+ + + + I+ TL ++ V Sbjct: 183 EGKELKSRLVASRIEYDTAYHWVLNNYSIREFHGMKEKITTGTRIDTTLNVIPSDFLVSV 242 Query: 240 LKANDQNLSFLLNPNPNNPNY-----RPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + L + + + EFHKR I +I Sbjct: 243 NDFEQMSTPKLYSYIQRQKEKGLANVGGVSITQFEIEFHKRFASVFSAFILTIIGASL-- 300 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 A + I I L +S + F + + P+L +++ I +F+ Sbjct: 301 -SARKMKGGMGLNIGIGLGLSVT-YIMFQTVSSSFAVSGTMPPMLAVWIPNIVFMFI 355 >gi|58038774|ref|YP_190738.1| hypothetical protein GOX0299 [Gluconobacter oxydans 621H] gi|58001188|gb|AAW60082.1| Hypothetical transmembrane protein [Gluconobacter oxydans 621H] Length = 396 Score = 95.5 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 36/361 (9%), Positives = 95/361 (26%), Gaps = 17/361 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTV 60 + +YI R S L L + + + + + ++ ++++KI+ +P Sbjct: 31 TTLAIYIARQFMLSTLSMVLALTGLVSLFDFIDLLRRAATRPNVPASLIVKIAALHVPYY 90 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLA----------ILL 110 + V PF + + + R++EL++ G S + L A I Sbjct: 91 IIYVLPFGILLGGIVCFSRLTRSSELIVARAAGISAWQFLASPLACALLTGLLTTTGISA 150 Query: 111 SIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTL 170 + + + ++ + + + L Sbjct: 151 LSSTMFRSAEMLDQTYLRTGGGPLTLNGGALWLRQSDDGLVPHGVAILHAQDVHLIDGAL 210 Query: 171 QGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT 230 + + R ++ + G + + Sbjct: 211 KVSGVSIFRLDDRDRLIVRVEAPQGALGDHQWILHGT--SVLHPDHLPQQIGDMTLPSDL 268 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 + ++ L + +R F L + L + Sbjct: 269 TVGRVQESFASPDTLSVFAL-PGFISLLERSGFPSIRHRLHFQSLLALPILAGTMAL--V 325 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 A R+ + ++ F +F S + + ++ P+L + + + Sbjct: 326 SAGFSMRPTRRGGVARMLGSGIAAGFALF-TISKVAEQFGESGALPPVLAAWAPTGAGLC 384 Query: 351 L 351 L Sbjct: 385 L 385 >gi|50083533|ref|YP_045043.1| hypothetical protein ACIAD0255 [Acinetobacter sp. ADP1] gi|49529509|emb|CAG67221.1| conserved hypothetical protein; putative permease [Acinetobacter sp. ADP1] Length = 356 Score = 95.5 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 38/356 (10%), Positives = 116/356 (32%), Gaps = 4/356 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + ++ + + L + + +V + + L ++ + + S + P L Sbjct: 5 RIVAKHVTKTTALAMLGTTIVLVILQVLFTYLGELSNLKAD-YSAWQAFLYVLWGAPRYL 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L ++ N+EL+++ + G S ++ V+ A++L + F + Sbjct: 64 YEILPISALIGAILGLGTLASNSELIVMRSVGISLWRIVGWVIRSALVLVLLSFALSEWV 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + +A + + + + Sbjct: 124 VPYTNERANSVKSHQSVAALGEVRGYWSREGQRFIYVDYANS--QGQLKRIQVVDFDDNY 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + + A+ G D Q ++ + ++ + ++ + ++L + + + Sbjct: 182 RLKSVTNAEQGQFVKDGQWLLNHSQQMAIQGQGDAVLANAAKQPFSLALQPKYVHMVTID 241 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 D + S L++ N ++ +TY+ F K++ + L++ + Sbjct: 242 PEDLSFSQLVS-FMNYMREYSQVPKTYQLAFWKKVASPFALITLVLVACSFIFGPLRQQS 300 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I + + + F F + +L + + L+ + + Sbjct: 301 MGFRLVIALFIGLGFYYLQDFLGYASLVYNPSPAWFVLGPIVLMFVAGSYLLYRAR 356 >gi|329907054|ref|ZP_08274546.1| putative Membrane protein; putative permease [Oxalobacteraceae bacterium IMCC9480] gi|327547111|gb|EGF31985.1| putative Membrane protein; putative permease [Oxalobacteraceae bacterium IMCC9480] Length = 378 Score = 95.5 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 45/377 (11%), Positives = 113/377 (29%), Gaps = 21/377 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y + I R+ L L + + ++ + V + +P Sbjct: 1 MTVLQKYFGKEILRAVLFVLLAFLALFAFFDLINELPAVGRGGYKIQHAFLYIALGLPGY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + VL M N+E I+ +G S + + ++ + F+ + Sbjct: 61 TYELMPIAALIGSIYVLAQMASNSEFTIMRVSGLSTRQAGFMLAKIGLIFVLITFLFGEV 120 Query: 121 IEPKC--------RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQG 172 I P + S + + L + + ++ + + PN L+ Sbjct: 121 ISPLTAERAERLKQQAQGTTSKEFRSGLWTKDQIRDGSGAMIGSRFVNVGELLPNGQLKD 180 Query: 173 IFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRK-----------SPISKDISIM 221 + + + S + + +L+D R S + Sbjct: 181 VKLYEFDSELRLTSMVTASTADFQGDRRWLLSDVATTRFALTVFNLAVLPDAPSGIATTT 240 Query: 222 KFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLF 281 + + + ++ D+ + L + ++ E Y F K++ Sbjct: 241 APTRELISDITPDILSVTFADPDRMSALDLATYTRHLAENRQVTERYDIAFWKKIIYPFA 300 Query: 282 PVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL 341 + +++ A A + I + +SF + I + P + Sbjct: 301 VFVMMALALPFAYLHARSGGVSLKIFMGIMIGVSFKLINSLFSHIGLLNTWPPLATAIAP 360 Query: 342 FLFCISSI--FLLMIKK 356 L ++ L +++ Sbjct: 361 SLLFLAGALGALWWVER 377 >gi|319944264|ref|ZP_08018540.1| permease YjgP/YjgQ family protein [Lautropia mirabilis ATCC 51599] gi|319742559|gb|EFV94970.1| permease YjgP/YjgQ family protein [Lautropia mirabilis ATCC 51599] Length = 369 Score = 95.5 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 47/361 (13%), Positives = 122/361 (33%), Gaps = 18/361 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F + R + + + I +++ +N +S + + +L + + +P Sbjct: 2 IFRQSLRRDLNSVAGVMFATLFTILVTTSLIRFLNRATSDRIASSDILPLIAFNAIGFIP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VL R++E++I +G S I+PV+ + + + ++ Sbjct: 62 VLLVLTVFLSVLMVLARAWRDSEMVIWFASGQSLTAWIRPVMMFVLPYAAVVAAVTFVLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P I +L + S + F + + + + + Sbjct: 122 PWANQQIAELRERFNQREDVSMVAPGQFRESTSSNRVFFVESMSPDKSTVSNVFVVQHNG 181 Query: 183 THKIYYAQSGSI----DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + A G + + ++L DG + + + + S+M+F Y ++ + +T Sbjct: 182 PRMVVVASRGGHVKIEENGDRFLVLEDGRRYDGTWGTPEYSLMEFLRYGVRLDPKPVNTQ 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + L+ R E R+ + + L++I + + Sbjct: 242 IESVRGMATPDLMQL----------SSPAARGELAYRVGLPISVFVIALLAIPLSF---V 288 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKI-EQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + I + I F S + I ++ + ++L + + L M +K+ Sbjct: 289 NPRLGSSVNLVIGVLIYFTYSNLNSVVRSWITQEKLSFGVGVWLTHALVLGLALYMFRKR 348 Query: 358 Y 358 Sbjct: 349 L 349 >gi|87121691|ref|ZP_01077578.1| permease YjgP/YjgQ [Marinomonas sp. MED121] gi|86162942|gb|EAQ64220.1| permease YjgP/YjgQ [Marinomonas sp. MED121] Length = 353 Score = 95.5 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 48/356 (13%), Positives = 123/356 (34%), Gaps = 5/356 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI + + +F ++ + +V+ ++++ +S +++ LL++ +P+ Sbjct: 1 MKQLDSYIGKGVVWAFFAVVFILLGLDYVLTFIEQVKRISEF-YTISNLLEVLLLRLPSK 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 P + T L ++ +EL +I G + + +++S+ Sbjct: 60 FAEYIPIASLIGTLVGLGALASTSELTVIRAAGIPIWRIGWSAIKPILIISLIGVGISEF 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P L + T + + ++ YI I + TL + + +S++ Sbjct: 120 IAPNADQR-ANLIENLKKQQTSDNIISGGVWIRSEEKYIFIGAADQKGTLYNVKVFNSKN 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 A++ + LN + + + F+S T+ + + Sbjct: 179 QTLQSTQIAKTAQYKTADE-WTLNQVTNTQFLADKIESNNTNFESLTMTFKPEHLYLATQ 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + +LS ++ N + Y EF + + + + LI++ + Sbjct: 238 EPEALSLSQSIS-YQNYLEGQDLNTSRYELEFWTKALRPVASIALVLIALSSVFGPLRSS 296 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + I F + + +L + + +I L +K+ Sbjct: 297 TMGSRIFSGVMIGIIFQNGLNLFGRMSLAADFSPLLGVL-IPIAICLAIGTLQLKR 351 >gi|320335817|ref|YP_004172528.1| permease YjgP/YjgQ family protein [Deinococcus maricopensis DSM 21211] gi|319757106|gb|ADV68863.1| permease YjgP/YjgQ family protein [Deinococcus maricopensis DSM 21211] Length = 366 Score = 95.5 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 47/367 (12%), Positives = 129/367 (35%), Gaps = 17/367 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 ++ ++ Y++ I + + ++ V +L+ I + + S ++ ++ +P Sbjct: 6 LRRYDRYVMAEILPLLVAGLVVVMLAVLVGALLEVIAPLLAKGASPALVARLVALQLPEA 65 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P F T L+ ++ + E+ G + L PVL + + +++ F+ Sbjct: 66 IKIGLPVGFLFATLLGLSRLSSDAEIKAALAGGVAPGRLFLPVLLMGVGVTVAAFVIGET 125 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKI---SKYNPNNTLQGIFIVD 177 + P+ ++ + + L + L D L I + Sbjct: 126 LGPRAKTESLSVQRQIVLDNPRVLGLDQPGLILRDALNRAISVTRVRPGGVLEGVRVVAL 185 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL---QTESAN 234 I A+ G + +L DG+ + +++++F+ L +++ Sbjct: 186 RESGGPSSIITAREGHLRDSNVLELL-DGQRITYQ-DGRPVTVIRFRRGELPVQDLQASF 243 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 ++ K D L L + + ++ + L + G ++ A Sbjct: 244 KTSDAPKPIDTPLPQL-WAKVQTYAQQHVNAPQETTALQRKFAEPLAALAMGFFAVALAL 302 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF----LFCISSIF 350 + + L ++F + +S + ++ P++ + L+ ++ + Sbjct: 303 ---FTFRSGLNVGLVWVLLLTFAYYASWSVF-RVMGESGALPPVVAAWTPDVLYLVAGLV 358 Query: 351 LLMIKKK 357 LL I + Sbjct: 359 LLAIAAR 365 >gi|187929752|ref|YP_001900239.1| permease YjgP/YjgQ family protein [Ralstonia pickettii 12J] gi|309781532|ref|ZP_07676268.1| membrane protein [Ralstonia sp. 5_7_47FAA] gi|187726642|gb|ACD27807.1| permease YjgP/YjgQ family protein [Ralstonia pickettii 12J] gi|308919945|gb|EFP65606.1| membrane protein [Ralstonia sp. 5_7_47FAA] Length = 397 Score = 95.5 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 44/396 (11%), Positives = 112/396 (28%), Gaps = 43/396 (10%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M +E Y R I F+ ++ + +L + V +L PT Sbjct: 3 MPVYEKYFARQIYGVFVFILFAVLALFIFFDMLGELGSVVGRYTTLVAFFH-VMLQAPTR 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + V + M +E I G + + +A+ L++ ++ Sbjct: 62 VYEVIPVAALISAIYVFSQMASQSEFTIFRVAGLDTRRALLSLFKIALPLALVTYLFGEF 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-----------LYIKISKYNPNNT 169 I PK +++ +A A + ++ + ++ + P+ + Sbjct: 122 IGPKAEEYAQKVRLEALGATVSAGFRSGVWVKDRGPAKPDGTGGEVTRFVNVGALQPDQS 181 Query: 170 LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKS----------------- 212 ++G+ I + + Q LND R Sbjct: 182 IKGLRIYEFDSDYRLSSIRVADQARYQGHQNWQLNDVTETRFVEFPRKPGTVAPQDTVQA 241 Query: 213 ----------PISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRP 262 + + + + + S +++ + L + Sbjct: 242 VPGAPDALAPDFRGEQTKLPHQEMRSELTPQILSVLMVTPDRMATLDLFQ-YIRHLRDNK 300 Query: 263 ELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGF 322 + + Y K++ ++ +++ A R +F + + Sbjct: 301 QDTQRYEIALWKKVVYPFTVLVMMALALPFAYL--HARAGAVGLKVFGGIMLGLSFQLVN 358 Query: 323 SYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + H N + I + + L ++ ++ Sbjct: 359 NLFSHVGLLN-TWPAIFTAIVPGALYLALALVSLRW 393 >gi|327402663|ref|YP_004343501.1| permease YjgP/YjgQ family protein [Fluviicola taffensis DSM 16823] gi|327318171|gb|AEA42663.1| permease YjgP/YjgQ family protein [Fluviicola taffensis DSM 16823] Length = 373 Score = 95.5 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 47/373 (12%), Positives = 104/373 (27%), Gaps = 17/373 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 +K + YI+R +F I+ +A V I +R++ S I+ + Sbjct: 2 LKILDRYIIRKFLSTFFFMLGIIMLLAMVFDIAERLSDFIEKQASFKAIVFDYYLNFLLY 61 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + + M ++ E++ + +G I +I+P + A +L + + + Sbjct: 62 YGNTFSSMIVFIAVIWFTAKMAQDAEIIPMLFSGRPFIRIIRPYMIAATILMLLSLVLNH 121 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P+ F + Y + I Sbjct: 122 FVLPRANRVRLDFEESFYRDRLLVENYNAEFPGNELVHYSTYNSEENMINDFVIERY-DS 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPIS---------------KDISIMKFK 224 + A++ S+ + L D + S ++ K Sbjct: 181 QNRLIHFMKARTASVIPGVKRWRLTDVFERKVSYSDTSGTSKGEMESIIQKHQLTENHLK 240 Query: 225 SYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVI 284 TL + + L + + Y E ++R + + Sbjct: 241 DTTLPYNVDDIAVRDNVVEAMTFRELSSFIAKEKAKGNPSVAMYEIELYQRSSYPFATYV 300 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 LI + + ++ I + + I + + L +F Sbjct: 301 LTLIGVSVSSRKKRGGIGINIAIGLLFVFIYIFAMKITTVAATTVGFPSVAAVWLPNVMF 360 Query: 345 CISSIFLLMIKKK 357 I ++FL I K Sbjct: 361 GILALFLYRIAPK 373 >gi|113868946|ref|YP_727435.1| permease [Ralstonia eutropha H16] gi|113527722|emb|CAJ94067.1| predicted permease [Ralstonia eutropha H16] Length = 375 Score = 95.5 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 44/364 (12%), Positives = 117/364 (32%), Gaps = 19/364 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + + R + + L ++ +++ + + +S S N +L + G L Sbjct: 2 ILQQALRRELAYTAGAVFLVMLTFMLTSLVIRILGMAASGKASPNDVLMLIGLATIGYLS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT +++E+++ + G S L+KPVL A + + Sbjct: 62 ILLSATLFISTLIVLTRWYKDSEMVVWFSAGISLRELVKPVLQFAAPFIVLALLLGMFAW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + + S + F Y+ + + + + Sbjct: 122 PWANQQSALFRDRFEQRGVMSMIAAGRFIEPAKANYVLFIEGIDADMKHARNVFVANSEA 181 Query: 183 THKIYYAQSG----SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA-NSST 237 ++ + +++ +G + P D I++F+ Y ++ ++ S Sbjct: 182 DKIGVALAHQGKFETMPNGDRLVVMENGRRYSGMPGQIDYRIVEFERYAVKVDNKAPESE 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 L ++ L+ E R++ + F +I+I A Sbjct: 242 AKLPPKSRDTIELIR----------NPTRENLGELIWRISLPILAFNFVMIAIPLAY--- 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIKK 356 + + + P+ ++ I + + + + + LL+ + Sbjct: 289 VNPRLGRYTPLVFAVLIYLTYSNLINLTQSWVRSGAIPFWLAWWPIHLAVFLGALLLFRY 348 Query: 357 KYTK 360 + + Sbjct: 349 RQNR 352 >gi|115352567|ref|YP_774406.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria AMMD] gi|115282555|gb|ABI88072.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria AMMD] Length = 363 Score = 95.5 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 53/363 (14%), Positives = 123/363 (33%), Gaps = 15/363 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ I +++ + +S +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTIMLTTMMIRIVGYAASGEIDPRDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT R++E+++ +G S LIKP+ A L + + + Sbjct: 62 VMLVVTLFVSILFVLTRWYRDSEMVVWLASGVSLTRLIKPIGVFATPLILLIAFFAFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P K + A+ Q S L F + + + + + + + Sbjct: 122 PWSNQQSKMIKARFQQRDEISLLAPGQFRESASNHRVFFIEKMSPDQSKVQNVFVTSTEN 181 Query: 183 THKIY---YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + ++L DG + +P + IM+F+ Y ++ S + + Sbjct: 182 GKVNIVVSHTGHTETKDGDRFVVLEDGRRYDGTPGQPNFKIMEFQRYGVKITSTPVTNVP 241 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD-KRAL 298 + L NP +N +EF R L + ++ I + Sbjct: 242 TTNSTPTPDLLRNPTRDNL-----------AEFAWRAGLPLIAINLMVLGIPLSYQNPRR 290 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 R + + I L+ S + + I + L++ + I ++ + + Sbjct: 291 SRTINLVMAVLIYLTYSNLLNVVQAQIEQGKMSFGVGLVGLHVVVAAIVALIFWLRVRNR 350 Query: 359 TKI 361 + Sbjct: 351 PLL 353 >gi|282880317|ref|ZP_06289031.1| putative membrane protein [Prevotella timonensis CRIS 5C-B1] gi|281305819|gb|EFA97865.1| putative membrane protein [Prevotella timonensis CRIS 5C-B1] Length = 391 Score = 95.5 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 44/353 (12%), Positives = 107/353 (30%), Gaps = 4/353 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPTV 60 K + YI++ +++ S I+ IA V + ++ + + I+ IP Sbjct: 32 KRIDWYIIKKFIGTYIFSIALIIAIAIVFDFNENLSKFTEYKAPVRAIIFDYYANFIPYF 91 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +P + + + N+E++ + TG S L++P + IL++ F Sbjct: 92 SNLFSPLFVFIAVIFFTSKLAGNSEIIAMLATGISFKRLMRPYMISCILIASVSFFLSAY 151 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + S + + N G + +D Sbjct: 152 VIPHGTVVRQNFDNLYKNNKKRSAADNVQLQVDKGTIAYIQHYDNKTKRGYGFSLDKFKD 211 Query: 181 TQTHKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A I + + ++ + + I+ + + E + Sbjct: 212 KKLVSHLTAMEIQYDTIADAKYHWTVTGWKIRELKGLREHITSGAERDTVIMMEPMDLVY 271 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L N + Y+ E+HKR+ I +I + + ++ Sbjct: 272 SKGQQETFTSPELREYISKQVNRGSGNVVQYQVEYHKRIASSFASFILTIIGLSLSARKR 331 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 + + + + + P + LF + + F Sbjct: 332 KGGMGLYLGLGLALSFLYILLQTISATFAINADAPPMLAAWVPNILFSVVAYF 384 >gi|254360524|ref|ZP_04976673.1| possible inner membrane protein [Mannheimia haemolytica PHL213] gi|261492350|ref|ZP_05988912.1| putative inner membrane protein [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496136|ref|ZP_05992544.1| putative inner membrane protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|153091064|gb|EDN73069.1| possible inner membrane protein [Mannheimia haemolytica PHL213] gi|261308238|gb|EEY09533.1| putative inner membrane protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312033|gb|EEY13174.1| putative inner membrane protein [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 369 Score = 95.5 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 54/363 (14%), Positives = 131/363 (36%), Gaps = 14/363 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + I +S L ++ I + Q+++ ++ S ++++ + G +PT+ Sbjct: 2 ILSRYLTKEIFKSQLAILFILLLIFFCQQLVRVLSSAVSGKVPADLVVSLLGLGMPTMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L +E+ ++ G + L+K +FL+I + + + Sbjct: 62 LMLPLSLFIALLLTLGRFYAESEITVMRACGIGQGLLVKVAMFLSIFTTALAVYNVFWLT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + ++ A+A+ F+ L F + N + +F + + Sbjct: 122 PWAINKQSEMLAEAKANPRFAALSAGQFMSAGGYVLFIDKIENNSLNDIYVFQPEQQKKN 181 Query: 183 THKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + A+SG++ Q + L + + +P S D I F++Y+ + + Sbjct: 182 KPSVVVAESGTLQGLPNGDQVLTLAESKRFEGTPQSADFRISHFENYSAYLGYQDVESDE 241 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + L+ ++E H RL L + L+++ + Sbjct: 242 KLVQRADFKKLMET----------KTPEAKAELHWRLALILAVPLMALLAVPMSSVNPRQ 291 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP-YYIPILYLFLFCISSIFLLMIKKKY 358 + K+ P + I F + + N +P++ + + I K Sbjct: 292 GRFAKLLPALLLYLIYFLLQSSLKSSGASGKLNAEVLMPLVSVAFLVLGVILNAWDSKFM 351 Query: 359 TKI 361 +K+ Sbjct: 352 SKL 354 >gi|148556807|ref|YP_001264389.1| permease YjgP/YjgQ family protein [Sphingomonas wittichii RW1] gi|148501997|gb|ABQ70251.1| permease YjgP/YjgQ family protein [Sphingomonas wittichii RW1] Length = 364 Score = 95.5 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 46/355 (12%), Positives = 113/355 (31%), Gaps = 3/355 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTV 60 ++ LY+ R F +V + + +L + + L P + Sbjct: 9 RTMTLYMARMFLVRFAAVLAALVIVLMALDLLGESGDILAYPGNGDAQLWLYVTLRTPQI 68 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + PF + T ++N+N+E++ + G S ++ P++ ++ + I F Sbjct: 69 IARFLPFAALLATLITFVTLNQNSEIISMKAAGISAHQILAPLVVASLGVGIVSFTFNER 128 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + +T+ + + D D I + + V D Sbjct: 129 VVARATATLTAWQDADYGPIPRDRGIVPNIWVRDGDDLIHATAVRGRGAQARLDSVTIYD 188 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ G + G + + F + + + + Sbjct: 189 RDGGRLISIIKGERAVQAAGGWRITGASRFDVAKGVTLRLAGFD-FAKGVTADRFTLANV 247 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 +++ L + + R+ +L+ L V+ L++ VAA A Sbjct: 248 DPASKSIVQL-RTAIADLDAAGRPTGPLRAGLWHKLSGPLSAVLMPLLAAVAAFGLARSG 306 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 I ++L ++ V F+ + + P ++ FL + ++I+ Sbjct: 307 HLFIRAVIGMALGFAYFVADNFALAMGNLGAYPPFLAAWAPFLLFLLIGETVLIR 361 >gi|51246435|ref|YP_066319.1| hypothetical protein DP2583 [Desulfotalea psychrophila LSv54] gi|50877472|emb|CAG37312.1| hypothetical protein DP2583 [Desulfotalea psychrophila LSv54] Length = 351 Score = 95.5 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 61/318 (19%), Positives = 116/318 (36%), Gaps = 9/318 (2%) Query: 45 SLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVL 104 L IL S P + P + T + ++ + ELL + G S ++ PV Sbjct: 3 DLQILSAYSPTSFPNIFLYTLPMASMLGITICFSRLSTDMELLALKAGGISIYKILPPVF 62 Query: 105 FLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKY 164 +A +++ F + P +K+LS + ++ + F D+ I + K Sbjct: 63 LVASAITLIAFYFSTQLIPASELAMKKLSYQILKEKIDQGIQAHKFTDAMGDIVIYVDKV 122 Query: 165 NPNN-TLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAI----ILNDGEVHRKSPISKDIS 219 + +++ D R + I A+SGS+ + + + L DG +HR +I Sbjct: 123 DKETGDWHNVWVSDMRGVKQPTITMARSGSMKSNSKQMSITIKLTDGSLHRPEEQGTEII 182 Query: 220 IMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQW 279 K + + E+ + +L ++ LL N + Y EFHKRL Sbjct: 183 TFKDYTINMPLETGGKNIFMLHKRLLSMPELLEQAKRWGNESKKRGRIYLIEFHKRLILP 242 Query: 280 LFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI-EQNPYYIPI 338 + ++ +++ R KK I + L I + + IP Sbjct: 243 IGCLMLSFLALPLGL---QARPGKKAIGIPVGLGIFIVYYILHTVGKELAEAGTVPLIPA 299 Query: 339 LYLFLFCISSIFLLMIKK 356 L+L + + I + Sbjct: 300 LWLPNVLFFLLAIFWIYR 317 >gi|237807325|ref|YP_002891765.1| permease YjgP/YjgQ family protein [Tolumonas auensis DSM 9187] gi|237499586|gb|ACQ92179.1| permease YjgP/YjgQ family protein [Tolumonas auensis DSM 9187] Length = 367 Score = 95.5 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 60/366 (16%), Positives = 130/366 (35%), Gaps = 20/366 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 YI + ++ L L ++ I Q ++ + + + +++ ++ IP + Sbjct: 2 IVFRYIFKETLKTQLSILLILLLIFTSQQFIRILARAADGSIPSSLIGQMMLLNIPYMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + ++E+ ++ G +++ L LA+L ++ ++ + Sbjct: 62 LLLPISLFIAILFAHGRLYADSEMTVLRAIGVGPSYIMRISLVLALLTTVVATVNTMWLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFR-LDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P R QL A+ LE F L + + + R Sbjct: 122 PMAREKQSQLLDAAKADPLSIPLESGRFLSLDGGHLTAYVEDVQDSGRSLQRIFLLQRSP 181 Query: 182 Q--THKIYYAQSGSIDLD---RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 I A SG + D + L +G+ + +P S SI F Y Q + + Sbjct: 182 DPAEAAIIVAASGHLTNDAQGTPWVTLANGKRYAGTPPSTQFSIANFAEYKAQLQRKDIE 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 KA S L N + +E+ R+ L + LI++ A Sbjct: 242 PSTPKARALPSSALYN----------STDKKQIAEWQWRVVLPLSIPLMTLIAVPLAV-- 289 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-PYYIPILYLFLFCISSIFLLMIK 355 + ++ + + ++ + F S IE+ +P LY+ + +F + + Sbjct: 290 -VNPRQGRYAKLLPAVMLYLSYFLLLSAGQSAIERGQLPEMPGLYIIPVLFTLLFAVPMN 348 Query: 356 KKYTKI 361 K T++ Sbjct: 349 IKSTRL 354 >gi|218296305|ref|ZP_03497061.1| permease YjgP/YjgQ family protein [Thermus aquaticus Y51MC23] gi|218243377|gb|EED09907.1| permease YjgP/YjgQ family protein [Thermus aquaticus Y51MC23] Length = 347 Score = 95.1 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 52/342 (15%), Positives = 119/342 (34%), Gaps = 14/342 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ + Y+LR FL IV + + + + + + LL Y P Sbjct: 1 MKTLDRYLLREALSLFLGGLAAIVLLFLAGAVYEVLAPLVAKGADPYTLLLYLLYRAPEA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + +L+ M ++EL + G +R ++ P L LA+L+++ +F+ Sbjct: 61 LVRGAPVAYLFTLLLLLSRMAEDSELKALLALGVARERVLLPFLLLALLIALAVFLLGES 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + PK + + L + L + L F+ + + + + I R Sbjct: 121 LVPKALAAGQDLLRRQVLERPRALLTPGTTFQDARGRVVYVGEVAGDR------IGKLRV 174 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ A+ G +++ +G+ + ++ +F+ + + Sbjct: 175 LSQEEVLLAERGRFQEG--VLLVEEGQRVTYE-GDRPRTLTRFQKGEILLKDLTFEPWQN 231 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 AN L L + +H+R + V+F L ++ A Sbjct: 232 PANRMTLGEL-KKEVERLRALGVKAGLEATTYHRRYAEPASAVVFALFAVGLAFYLLGGS 290 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 + + ++I ++ + + + P+L + Sbjct: 291 RSLGW----VGVAILTFFYYATWSVGRIMGEQNALDPLLAAW 328 >gi|86158886|ref|YP_465671.1| permease YjgP/YjgQ [Anaeromyxobacter dehalogenans 2CP-C] gi|85775397|gb|ABC82234.1| permease YjgP/YjgQ [Anaeromyxobacter dehalogenans 2CP-C] Length = 360 Score = 95.1 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 47/356 (13%), Positives = 111/356 (31%), Gaps = 13/356 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + +FL++ +V I + + + + L +L++ Y V+ Sbjct: 2 ILFRYVARRMLGAFLVALAGVVGIYLAVDFVDNAAAYTGAGW-LPAVLQLYAYKAAGVVY 60 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 MV P + + + E + G L PVL + +L L + +++ Sbjct: 61 MVAPAALILGAGIATSMFRQTREYTAMRAVGLGPWRLAVPVLAVTLLAGGVLVVLNDVVG 120 Query: 123 PKCRST------IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + + + + F +D + P+ + + + Sbjct: 121 VQAAERAEEITAHRFARGGNLRRFLAAREPKRWFRGVDGKRVYHLRGNLPDGGFERVTVY 180 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD-ISIMKFKSYTLQTESANS 235 + + + D +A IL D E P + + K Y Sbjct: 181 ELS-EAFTLARRIDAARMHPDGRAWILEDVEDRTFRPDGSMALERAERKRYAFDEPPDAF 239 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + I K + S L+ + + ++ E + RL + + A Sbjct: 240 AVIAGKPDQMRWSTLIRQ-IGIRKRLGQPVTEFQLERYDRLAYPFAGI--PGALLALALA 296 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 R+ + ++ ++ +FWG + + + P + + + + L Sbjct: 297 LRRDRKGHLSAALLEAVGVT-LLFWGMQGVSSALGLSGRVAPWVASWAPNVVFLAL 351 >gi|294055919|ref|YP_003549577.1| permease YjgP/YjgQ family protein [Coraliomargarita akajimensis DSM 45221] gi|293615252|gb|ADE55407.1| permease YjgP/YjgQ family protein [Coraliomargarita akajimensis DSM 45221] Length = 382 Score = 95.1 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 57/379 (15%), Positives = 123/379 (32%), Gaps = 25/379 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRIN-LVSSSTESLNILLKISGYLIPT 59 + ++ + I + L++ +F+ ++ + LV++ +K+ G LIP Sbjct: 2 LNLLHRHVFKEIAVAILLAMGLFIFVLLTGNAIRDVAALVAAGKLDAMTFIKLMGLLIPY 61 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 V P T L ++ E+ + + G S + PV F+A + + + Sbjct: 62 VAAYALPLGILTGTLMALGRLSSQREITAMKSAGLSLYQIASPVFFIAFIAMVLSLVVNL 121 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 P+ +S K++ A ++EE F I + ++ Sbjct: 122 DFAPRAKSAFKEMLASTISENPVKFIEEKKFITGFPGYVIYMGDHDGGLMKDFWVWELDD 181 Query: 180 DTQTHKIYYAQSGSIDLDRQAIIL----NDGEVHRKSPI------SKDISIMKFKSYTLQ 229 Q + A+SG +D DR+A L + + +D+ + F+ Sbjct: 182 RKQVTRFVRAESGELDYDREANELVLRVYNATAELRDDDAPETLLGEDLQTIFFQETEFA 241 Query: 230 TESA----NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLE--------TYRSEFHKRLT 277 T +K + N + L+ + E + + K Sbjct: 242 LPLERLFGQQKTRHVKIKNMNFAQLMEVREAALQAEAQSEEPGISKQRMQAQVQIQKNCA 301 Query: 278 QWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP 337 L + A + + I + + S++ +IE P Sbjct: 302 MAFSTFSLALFGVPLAIQVGRKESYANLAIALIIAMTYYFLMIVVSWMEDRIELRPDL-- 359 Query: 338 ILYLFLFCISSIFLLMIKK 356 +++L I L +I++ Sbjct: 360 LIWLPNILFQGIGLYLIRR 378 >gi|83952307|ref|ZP_00961039.1| permease, YjgP/YjgQ family protein [Roseovarius nubinhibens ISM] gi|83837313|gb|EAP76610.1| permease, YjgP/YjgQ family protein [Roseovarius nubinhibens ISM] Length = 363 Score = 95.1 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 39/348 (11%), Positives = 99/348 (28%), Gaps = 14/348 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y R + + + +I ++ + +L+I +P Sbjct: 2 ILHFYFARKFLWTLIGIATVFSVLLGLIDLVDELQDFPD--LPFFDVLEIVLLNLPHANY 59 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + T + + R++EL+++ +G S + + + +A L+ + N + Sbjct: 60 EILPLVMILATVALFVRLARSSELVVLRASGRSALAGLAGPVAVAALVGLVGVTMFNPVV 119 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFR-----LDDDLYIKISKYNPNNTLQGIFIVD 177 L + + I P+ + Sbjct: 120 AASAKRYNDLVNGHSGLGDNVLAISSEGLWLRQGTEEGQTVIHAKSATPDLSTLFGATFT 179 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQ--TESAN 234 S + + + S +L + L+D ++ + + + S T++ Sbjct: 180 SFTPEGDPMRRLTAESAELGQGQWHLSDVKIWDLANTDNPEASARTQDRLTIRAALTRDR 239 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 K + L + Y F L Q LF + L+ Sbjct: 240 IIDSFGKPEYIPIWDL-PAFIDQLETAGFSARRYAVWFQMELAQPLFLIALVLVGAAF-- 296 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 R + ++ + F + + ++ + +N +L + Sbjct: 297 TMKHARLANTGTSVLAAVMLGFTLHYIRNFAQ-VLGENGQIPILLAAW 343 >gi|307728896|ref|YP_003906120.1| permease YjgP/YjgQ family protein [Burkholderia sp. CCGE1003] gi|307583431|gb|ADN56829.1| permease YjgP/YjgQ family protein [Burkholderia sp. CCGE1003] Length = 365 Score = 95.1 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 55/362 (15%), Positives = 120/362 (33%), Gaps = 16/362 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ + +++ + + +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTLVLTTMMIRIVGFAAQGEIDPRDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT +++E+++ ++G S IKP+ A + I + + Sbjct: 62 IMLVATLFVSILFVLTRWYKDSEMVVWLSSGVSLTQFIKPIGMFATPIIILIMFFVFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P K + A+ Q S L F + + + + + Sbjct: 122 PWSNQQSKLIRARFQQRDEVSLLAPGQFRESAASHRVFFIEKMSPDQGHVENVFVTSTEN 181 Query: 183 THKIYYA----QSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + + ++L +G + P D IM+F+ Y ++ ES Sbjct: 182 GKLNVVVSKNGHTETHKNGDRFVVLENGRRYDGEPGHPDFRIMEFERYGVRIESQPVVNT 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD-KRA 297 L+ L NP N +EF R L + L++I A Sbjct: 242 PTTTGTPTLTLLRNPTKENL-----------AEFAWRAGLPLIAINLMLLAIPLAHQNPR 290 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 R + + I L+ S + S+I + IL++ + I + + + Sbjct: 291 RSRTINLVMAVLIYLTYSNLLNVVQSWIEQGKMSFGVGLVILHVIVAGIVAFIFWLRVRN 350 Query: 358 YT 359 Sbjct: 351 RP 352 >gi|301310576|ref|ZP_07216515.1| putative membrane protein [Bacteroides sp. 20_3] gi|300832150|gb|EFK62781.1| putative membrane protein [Bacteroides sp. 20_3] Length = 361 Score = 95.1 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 47/353 (13%), Positives = 110/353 (31%), Gaps = 2/353 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 +K + YI++ +++ + I+ I+ V I ++I+ + L I++ IP Sbjct: 5 LKRIDWYIIKQFLGTYVFAIALIISISVVFDINEKIDKFLNPDVPLKAIIVDYYLNFIPY 64 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + +E++ + +G S L+ P A +++I FI Sbjct: 65 FANLFSPLFTFIAVIFFTSKLADRSEIIAMLASGMSFRRLMLPYAVSATIIAIVTFILNA 124 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 I P + + +N ++ + Y+ + + F ++ Sbjct: 125 YIIPPAN-ETRIDFQNKYIRNKKVDYVKNAQLEIEPGIIAYFDSYDARSNMGYRFSLEHF 183 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + + D + + + I K TL ++ V Sbjct: 184 EDKKLISRLTAKSIKYDSLYQWTVIDYMIRDFDGMREHIFQGSRKDTTLTIVPSDFLISV 243 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L ++T++ E+HKR + I I + ++ Sbjct: 244 NDCETMTTPELNTYINRQKKRGIGNIQTFQIEYHKRFATIMAAFILTSIGASLSSRKIKG 303 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 I S +P + ++ +IFL Sbjct: 304 GMGMNIGIGLALSFSYILFMTVTSTFAINGYVSPAVAAWIPNIVYTFIAIFLY 356 >gi|82701537|ref|YP_411103.1| permease YjgP/YjgQ [Nitrosospira multiformis ATCC 25196] gi|82409602|gb|ABB73711.1| permease YjgP/YjgQ [Nitrosospira multiformis ATCC 25196] Length = 354 Score = 95.1 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 43/358 (12%), Positives = 119/358 (33%), Gaps = 4/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+ + ++ ++ + + +L +++ V T S+ + L+P Sbjct: 1 MTIIYRYLGLQVLMGLGIATAVLLPLFGFLDLLDQLDDVGKGTYSVKDAFLYTALLLPRR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + PF M L + +EL + G S + + + + I+L +F+ + + Sbjct: 61 FIQLAPFIALMGNVTALGRLAVGSELTALRGAGVSPLGISLAPVVVGIILLLFITVLDQF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ + S A L + + ++ + D+ ++I + I I+ D Sbjct: 121 VAPQFQQK-AISSRAAALEKSAALGQQLGIWTRDERNILRIGEMLHARRAANIEIMHFDD 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 Y + ++ L D + + + +I + + + + ST+ Sbjct: 180 NGFLLRYTYAKYADIINEGLWELRDVVIKTFNGNAMEIVSRESVPWEPFLKEEDISTLTK 239 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + + L + + + Y ++ L + L+SI Sbjct: 240 SPESLSPAELF-LHVHFLRATGQESGAYELALWRKAGGALTTIAMLLLSIPFVFGSVRAG 298 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 ++ + + + + NP + L + ++ +++ + Sbjct: 299 LGNRLVVASMLGISVYLFDQITANAGLLLHLNPALSAL--LPGGVLIAVAYFWLRRIF 354 >gi|262274979|ref|ZP_06052790.1| putative permease [Grimontia hollisae CIP 101886] gi|262221542|gb|EEY72856.1| putative permease [Grimontia hollisae CIP 101886] Length = 366 Score = 95.1 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 46/360 (12%), Positives = 116/360 (32%), Gaps = 21/360 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R ++ L + + + + ++ + + + +L + G +P++ Sbjct: 2 IIVRYLIRETVKTQLAVLFVLFLVFFSQKFIRVLANATDGSIPGGDVLTLVGLYMPSMGM 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LAI+ + + Sbjct: 62 LMLPLSLYIGILITFGRLYAESEITVMNATGIGNKFLIRAALYLAIITGSVAAFNALWLT 121 Query: 123 PKCRSTIKQLSAKAQLALTFS--YLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P ++ + + + L +FI Sbjct: 122 PWANDKEVKVMESLEADTGLELLVQGKIQTTPDGQAVVYVNDITGDGKDLHKVFIAQPVP 181 Query: 181 TQ--THKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + A+ G I RQ + LN+G + P D ++ +++Y + Sbjct: 182 RGTLRPNVVVAEKGFISELPDGRQVLDLNNGIRYEGVPTLLDYTVTDYENYQVLIGQREV 241 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + L+N ++E R++ L + +I Sbjct: 242 RQKNRDWDAMPTQILVNE----------SSPRAQAELQWRISLVLCIPLMTMI---VVPL 288 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI-PILYLFLFCISSIFLLMI 354 A+ ++ + +F ++ I F S +E+ L+ + L++I Sbjct: 289 SAVNPRQGRFAKLFPAVLIYLAYFLSISAAKSAVEEGKLPAEIGLWSVNLIALLVALMLI 348 >gi|265763912|ref|ZP_06092480.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|263256520|gb|EEZ27866.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] Length = 365 Score = 95.1 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 48/362 (13%), Positives = 124/362 (34%), Gaps = 7/362 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPTV 60 K +LYI++ +++ + I+ IA V ++++ + + I+ IP Sbjct: 8 KRLDLYIIKKFLGTYVFAIALIISIAVVFDFNEKMDKFMERSAPWSAIIFDYYMNFIPYF 67 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +P + + + N+E++ + +TG S +++P + A +++I FI + Sbjct: 68 ANLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMLRPYMISAGIIAISTFILGSY 127 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ T K +Y+ + + + N T + D Sbjct: 128 VIPRGSVTRLDFEDKYVKKKKTTYVHNIQLEIDTGVIAYIDNYQDYNKTGNRFSLDKFVD 187 Query: 181 TQTHKIYYAQSGSIDLDR-QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + A+S + D + D + + + I + + E A+ + Sbjct: 188 KKLVSHLTARSITYDTTAVNKWTIKDYMIRNLDGLKETIVRGDKMDFIIPMEPADFMIMR 247 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + L ++ + E+HKR+ I +I + + Sbjct: 248 NQQEMLTSPQLSAYIDKQKQRGIANIKEFEIEYHKRIAMSFASFILTVIGVSL----SSR 303 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF-CISSIFLLMIKKKY 358 + + + + F + N P++ +++ + ++ + +K Sbjct: 304 KTKGGMGLHLGIGLGLSFSYILFQTVASTFAVNGNMPPMIAMWIPNLLYALIAFYLYRKA 363 Query: 359 TK 360 K Sbjct: 364 PK 365 >gi|90423815|ref|YP_532185.1| permease YjgP/YjgQ [Rhodopseudomonas palustris BisB18] gi|90105829|gb|ABD87866.1| permease YjgP/YjgQ [Rhodopseudomonas palustris BisB18] Length = 362 Score = 95.1 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 43/357 (12%), Positives = 104/357 (29%), Gaps = 11/357 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTV 60 + Y + L + + + + + + S ++++ S Y +P + Sbjct: 4 NTLSRYFAGRFVTAALAVFAGLFVLLVFVDYIDLLRRAGGRPSISALLIVQTSVYRVPQL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + PFC + +++R EL++ G S + P L+ A+ L +F + N Sbjct: 64 LERLMPFCILIGAMTCYLALSRRLELVVARAAGISAWQFMAPALWSALALGVFATVVFNP 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL----YIKISKYNPNNTLQGIFIV 176 + + KQ+ A+ + S + + F+ I ++ L V Sbjct: 124 MSANMQERAKQMEAEMFGDSSGSLQDASGFWINQVTTEGQAIINAARSQQQGALLTGLSV 183 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + ++ L+ + + D + + A Sbjct: 184 FRFEPDFSFSERIEAREATLEPGFWRFKNLRRYTLDGPPVDQDVFLLPTT---LTLAQVR 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + YR +FHK L + +++ + Sbjct: 241 NSFSTPETVSFWQL-PGYIRSSESSGFATAGYRLQFHKLLARPFLLAAMVMLAASVSL-- 297 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 R + + F ++ + + C+ S+ + Sbjct: 298 RFFRFGGVQKMVLSGVGAGFLLYILSKVTEDLSKAELMHPLAAAWLPVCVGSLAGFL 354 >gi|300312407|ref|YP_003776499.1| permease [Herbaspirillum seropedicae SmR1] gi|300075192|gb|ADJ64591.1| permease transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 376 Score = 95.1 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 43/375 (11%), Positives = 119/375 (31%), Gaps = 19/375 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + Y I RS L + + + +++ ++ V + L + +P Sbjct: 1 MRVIQRYFTSEITRSVLFALAAFLALFAFFEMMGQLEQVGRNGYKLQQAVFYVLMGLPGN 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + T L+ + +E I+ + S + + + + ++ + + Sbjct: 61 VYELMPTAVLIGTIYTLSQLAARSEFTIMRVSSMSTGQAARVLARIGVGFAVLTIVFGEL 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-----------LYIKISKYNPNNT 169 I PK ++L +AQ A S ++ + +I I P+ Sbjct: 121 IAPKATEWAEKLKLQAQGASLSSQFRSGMWAKDVIRDHGLEGNVVGSRFINIRTVQPDGR 180 Query: 170 LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT-- 227 ++G+ + + + L+D + S K+ Sbjct: 181 IEGVKLYELDSDFHMARMVTAKAGMYDGNHQWTLSDVVQSDFTGGSDRKITEPVKTVKSA 240 Query: 228 ----LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPV 283 + + +++ D+ ++ L + + + Y F K++ L Sbjct: 241 QLTLVSEVTPEILSVLFADPDRMSAYDLLAYTKHLEANNQRTDRYEIAFWKKIVYPLSIF 300 Query: 284 IFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY--IPILYL 341 + +++ A I + + F + + + P + + L Sbjct: 301 VMLALALPFAYLHFRAGGVSLKIFTGIMIGVCFQLINSLFSHLGLLNTWPAFVTAALPSL 360 Query: 342 FLFCISSIFLLMIKK 356 +++ L +++ Sbjct: 361 LFMALAAGALWWVER 375 >gi|296283030|ref|ZP_06861028.1| permease [Citromicrobium bathyomarinum JL354] Length = 407 Score = 95.1 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 48/361 (13%), Positives = 121/361 (33%), Gaps = 11/361 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YI R + + + Q+L+ VS+ + ++ ++ G L+P Sbjct: 5 SRLDRYIFRLTIVPMIGVFALAATLLMLEQMLKLFRFVSTEGGPVGVVFQMLGTLLPDYA 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + T + ++EL ++ G L++ + + L + Sbjct: 65 VLAIPLGLLLGTLFAFRQLALSSELDVMRAVGLGYGRLLRVPFAITLALMAVNAAIVFYV 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSRD 180 +P + ++L + + ++ F L D + ++I + + L+GIF + + Sbjct: 125 QPVSKYYYEELQFDLRSGALGASIKVGEFTTLADRMALRIEESEDSGRKLKGIFARINAE 184 Query: 181 TQTHKIYYAQSGSI-----DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 A+ G + D + L+DG + + P + ++ F + L + Sbjct: 185 DGQTLSISAREGRFLSTSDNPDTIILRLSDGTIVQ-DPPGETPRVLSFTEHDLPIDLPAI 243 Query: 236 STIVLK---ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + + L LL ++ + L + ++ F+ R+ + + L+++ Sbjct: 244 EQFRARGEAEREYILPELLRMGWSDTTTEAQRLGS-QASFNYRMVELAMMLFMPLLAVAL 302 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 A + I + V +P +F ++ Sbjct: 303 AIPPKRSTSALGVFVAVILVVAYHKVNQYMQDFAALGRVDPTLGLWGPFAIFAGLILWWY 362 Query: 353 M 353 Sbjct: 363 W 363 >gi|255009350|ref|ZP_05281476.1| hypothetical protein Bfra3_09423 [Bacteroides fragilis 3_1_12] gi|313147107|ref|ZP_07809300.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313135874|gb|EFR53234.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 365 Score = 95.1 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 48/362 (13%), Positives = 123/362 (33%), Gaps = 7/362 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPTV 60 K +LYI++ +++ + I+ IA V ++++ + + I+ IP Sbjct: 8 KRLDLYIIKKFLGTYVFAIALIISIAVVFDFNEKMDKFMERSAPWSAIIFDYYMNFIPYF 67 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +P + + + N+E++ + +TG S +++P + A +++I FI + Sbjct: 68 ANLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMLRPYMISAGIIAISTFILGSY 127 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ T K +Y+ + + + N T + D Sbjct: 128 VIPRGSVTRLDFEDKYVKKKKTTYVHNIQLEIDTGVIAYIDNYQDYNKTGNRFSLDKFVD 187 Query: 181 TQTHKIYYAQSGSIDLDR-QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + A+S + D + D + + + I + E A+ + Sbjct: 188 KKLVSHLTARSITYDTTAVNKWTIKDYMIRNLDGLKETIIRGDKLDSIIPMEPADFMIMR 247 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + L ++ + E+HKR+ I +I + + Sbjct: 248 NQQEMLTSPQLSAYIDKQRQRGIANIKEFEIEYHKRIAMSFASFILTVIGVSL----SSR 303 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF-CISSIFLLMIKKKY 358 + + + + F + N P++ +++ + ++ + +K Sbjct: 304 KTKGGMGLHLGIGLGLSFSYILFQTVASTFAVNGNMPPVIAMWIPNLLYALIAFYLYRKA 363 Query: 359 TK 360 K Sbjct: 364 PK 365 >gi|163788640|ref|ZP_02183085.1| hypothetical protein FBALC1_10402 [Flavobacteriales bacterium ALC-1] gi|159875877|gb|EDP69936.1| hypothetical protein FBALC1_10402 [Flavobacteriales bacterium ALC-1] Length = 340 Score = 95.1 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 45/340 (13%), Positives = 111/340 (32%), Gaps = 1/340 (0%) Query: 19 SCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLT 78 L + I + + +++ + + + ++ P + + Sbjct: 1 MLLLFIPIGITVDLAEKVGKILENKAPFGEVTAYYVDFTIYFANLLFPLFLFLSVIWFTS 60 Query: 79 SMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQL 138 + NTE++ ++G S ++P L A +++IF + + P + K Sbjct: 61 KLANNTEIVAFLSSGVSFTRFLRPYLIGATVVAIFALVLGMYLSPMASKGFNEFKFKYLK 120 Query: 139 ALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI-YYAQSGSIDLD 197 +++ +++D+ YI +S ++P + F + + K +A++ Sbjct: 121 KNKQVQQTRDVYQQINDNDYIFVSSFSPKSKTGMKFTYEHIEGNELKYKIFAENIRYIEK 180 Query: 198 RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNN 257 L + I + K E + + + A ++ LL+ Sbjct: 181 DSTYRLTTYVKRSFENGVERIEKERSKDMHFPFELEDLTPVQYAAETKSYGELLDFIAAE 240 Query: 258 PNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFG 317 + Y K+ + + I +I++ + + + I Sbjct: 241 KRRGSPNIGRYEVVKQKKWSLPVSIFILTIIAVAVSSVKRRGGMGVNLAFGIAIAMIYVF 300 Query: 318 VFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + F + + L FLF I +I+LL K+ Sbjct: 301 LDKIFGVMAEQANFPAVIAVWLPNFLFGILAIYLLQNAKR 340 >gi|217978371|ref|YP_002362518.1| permease YjgP/YjgQ family protein [Methylocella silvestris BL2] gi|217503747|gb|ACK51156.1| permease YjgP/YjgQ family protein [Methylocella silvestris BL2] Length = 361 Score = 95.1 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 42/352 (11%), Positives = 101/352 (28%), Gaps = 4/352 (1%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + Y L + I + +V+ ++ + + S + ++ P+ Sbjct: 5 TLGRYFSARFLTLILAVFVTICGMVFVVDFVEMLRRTTDLPDASPRSVALLAMLRAPSAS 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PFC + + R ELLI G S + P + +AI++ I + N + Sbjct: 65 EQLMPFCVLCGSMAAFLDLTRKLELLIARAVGVSVWGFLVPPIAIAIVIGIGSVMLFNPV 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 + ++ + LT + +++ R I K + + Sbjct: 125 SAAMKQRADKIEVEIFGRLTQQNADADIWIRQKSVDGDAIIKARTMSRDGSRLTKPTVYI 184 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + + + + + E R ++ A + + Sbjct: 185 YDDHDKFEAEVEAEHAQLSDGVWRFEQARILMPGEETIETSVYLLASNLTPAQVARGPIS 244 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 L + + Y+ +F L + L V LI+ + R Sbjct: 245 PQSVAFWDL-DAARRQTDRAGLDSTAYKLQFQSLLARPLLFVAMVLIAAAFSL--RFFRF 301 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + ++ F ++ + P+ I+S+ + Sbjct: 302 GGIEKMVGGGVAAGFVLYVATKLVGDLGGAGLVSAPVAAWSPAVIASMLGAL 353 >gi|91215236|ref|ZP_01252208.1| hypothetical protein P700755_13102 [Psychroflexus torquis ATCC 700755] gi|91186841|gb|EAS73212.1| hypothetical protein P700755_13102 [Psychroflexus torquis ATCC 700755] Length = 337 Score = 95.1 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 50/340 (14%), Positives = 118/340 (34%), Gaps = 7/340 (2%) Query: 22 FIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMN 81 + I ++ + ++I+ + + + +L G ++ P + + + Sbjct: 1 MFIPIGIIVNLSEKIDDIKENEVPIEEVLVFYGNFTIYFANLLFPIFLFLSIIWFTSKLA 60 Query: 82 RNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALT 141 NTE++ I ++G S ++P L A L+ + + P + + Sbjct: 61 NNTEIIAILSSGISFSRFLRPYLIGATLVCGIALMFTMYLVPNASQGFNEFKYQYFKKGK 120 Query: 142 FSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF-IVDSRDTQTHKIYYAQSGSIDLDRQA 200 S +N++ +++D+ +I + + + F + + A + Sbjct: 121 QSQETQNVYRQVNDNEFIFATNFQTSTGTARNFTLEHFEGQEMTFKISASRLKFNAKDST 180 Query: 201 IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNY 260 LN+ E + I L E + + A + L + Sbjct: 181 YTLNNFEKRTINEREDVIERQSSLDTILPFEFGELTPVEYIAETLDYGELKDFITTEKRR 240 Query: 261 RPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFW 320 + +Y+ +KR + + I +I++ A+ R+ + I + I+F + Sbjct: 241 GSANISSYQIVAYKRWSVPVSAFILTIIAVSV---SAMKRRGGMGANLAIGIVIAFAFIF 297 Query: 321 G---FSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 F I K +P LF + +I+LL+ K+ Sbjct: 298 LDKVFGTIAEKSTFSPLIAVWFSNILFGLLAIYLLIKAKR 337 >gi|15964906|ref|NP_385259.1| hypothetical protein SMc00583 [Sinorhizobium meliloti 1021] gi|307300976|ref|ZP_07580745.1| permease YjgP/YjgQ family protein [Sinorhizobium meliloti BL225C] gi|307317711|ref|ZP_07597149.1| permease YjgP/YjgQ family protein [Sinorhizobium meliloti AK83] gi|15074085|emb|CAC45732.1| Hypothetical, transmembrane protein [Sinorhizobium meliloti 1021] gi|306896473|gb|EFN27221.1| permease YjgP/YjgQ family protein [Sinorhizobium meliloti AK83] gi|306903931|gb|EFN34517.1| permease YjgP/YjgQ family protein [Sinorhizobium meliloti BL225C] Length = 360 Score = 95.1 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 51/353 (14%), Positives = 114/353 (32%), Gaps = 10/353 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTV 60 + Y + R+ + I + ++I + + +S+ +++ L ++ + IPT+ Sbjct: 4 NTLGRYFFKRYARTTFWFLVGIFALIFIIDFSELTSRMSNLPHYTVSGALLMTTFRIPTI 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L PF L S+NR EL++ G S ++P + A+L + + N Sbjct: 64 LQQTVPFVALFAAMAALISLNRRYELVVTRAAGISVWQFLRPFVVGALLFGVLAVVVINP 123 Query: 121 IEPKCRSTIK--QLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 + + + + + + + D I T V Sbjct: 124 LAAWGTKKAEALEAEWGSTRSAAANSIPWLRQIYDGTDTIIGARSVQNGGTELINVTVIH 183 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 D Q + S L+ +LN + M+ + Sbjct: 184 FDPQGAITLRQDAKSAKLEDGYWLLNGVVETEV---GRLPRRMETAQLRTNLKPDFVQER 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + KA+ L ++FH ++ L V LI+ + K + Sbjct: 241 LAKADSIQFFDLPRK-IEVARSFGFSTNGLETQFHSLMSLPLLLVAMTLIAACVSLKFSR 299 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 Q + + + +S V + + ++ + P + +L + ++ L Sbjct: 300 FNQSR---SVILGGILSGFVLYVVTVLVKAFGSSGIVPPFVAAWLPVVVAMAL 349 >gi|255020900|ref|ZP_05292956.1| hypothetical protein ACA_1122 [Acidithiobacillus caldus ATCC 51756] gi|254969691|gb|EET27197.1| hypothetical protein ACA_1122 [Acidithiobacillus caldus ATCC 51756] Length = 357 Score = 95.1 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 43/359 (11%), Positives = 113/359 (31%), Gaps = 4/359 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + + R + + ++ + +V ++ + + + L+ +P + Sbjct: 1 MKRADRLLFRGMLGYSTLVLFVLLALMFVANLIAKSGGPGHGSWDMGKLVTYISLQLPDL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + ++ +N ++EL+ + +G S L +P+L++ + ++ F Sbjct: 61 AYNLIPLALLLGALIWVSLLNSHSELVALRMSGWSLWRLQRPLLWVGLWGALLTFALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTL-QGIFIVDSR 179 + P + + A F L + + D I+I + +G+ IV + Sbjct: 121 VVPYTAPAAEAIWANGGQGSGFQALPDGGVWLRQGDQLIQIRAIAADGRRLEGLRIVITT 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + A L + H + + + + ++ + + Sbjct: 181 PSLDAVTRMLDAREALYRDGAWQLQGVQSHVLGAQRIVSTTLVQQPWDVRLDPGTLRSFS 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L L + N + + F KR+T ++ I +V Sbjct: 241 HPTRTMTLPAL-WESYQNLQGSVLSMNRFALAFWKRVTYPWVGLVM--IWLVVPLVTRNP 297 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 R I + L + + +F + + +++ Y Sbjct: 298 RGGGLAGRILMGLVLGLAFHFLTEMSGFISISGGIPPVFATVFPLALFASIAWGLQRYY 356 >gi|91782195|ref|YP_557401.1| membrane protein, YjgP/YjgQ like [Burkholderia xenovorans LB400] gi|91686149|gb|ABE29349.1| membrane protein, YjgP/YjgQ like protein [Burkholderia xenovorans LB400] Length = 365 Score = 95.1 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 55/362 (15%), Positives = 123/362 (33%), Gaps = 16/362 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ + +++ + +S +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTLVLTTMMIRIVGFAASGEIDPRDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT +++E+++ ++G S IKP+ A + I + + Sbjct: 62 IMLVATLFVSILFVLTRWYKDSEMVVWLSSGVSLTQFIKPIGIFATPIIILIMFFVFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P K + A+ Q S L F + + + + + + Sbjct: 122 PWSNQQSKLIRARFQQRDEVSLLAPGQFRESATSHRVFFIEKMSPDQARVENVFVTSTEN 181 Query: 183 THKIY----YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + + ++L +G + P D IM+F+ Y ++ +S Sbjct: 182 GKVNVVVSKTGHTETRKNGDRFVVLENGRRYDGQPGQPDFRIMEFERYGVKIQSQPVVNT 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD-KRA 297 L+ L NP +N +EF R L + L++I A Sbjct: 242 PTTTGTPTLTLLRNPTDDNL-----------AEFAWRAGLPLIALNLMLLAIPLAHQNPR 290 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 R + + I L+ S + S+I P + L++ + I + + + Sbjct: 291 RSRTINLVMAVLIYLTYSNLLNVVQSWIEQGKMSFPVGLVGLHVIVAAIVAFIFWLRVRN 350 Query: 358 YT 359 Sbjct: 351 RP 352 >gi|197121804|ref|YP_002133755.1| permease YjgP/YjgQ family protein [Anaeromyxobacter sp. K] gi|196171653|gb|ACG72626.1| permease YjgP/YjgQ family protein [Anaeromyxobacter sp. K] Length = 360 Score = 94.7 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 46/356 (12%), Positives = 110/356 (30%), Gaps = 13/356 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + +FL++ +V I + + + + + L +L++ Y V+ Sbjct: 2 ILFRYVARRMLGAFLVALAGVVGIYLAVDFVDNASAYTGAGW-LPAVLQLYAYKAAGVVY 60 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 MV P + + + E + G L PVL + +L L + + + Sbjct: 61 MVAPAALILGAGIATSMFRQTREYTAMRAVGLGPWRLAVPVLAVTLLAGGVLVVLNDAVG 120 Query: 123 PKCRST------IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + + + + F +D + P+ + + + Sbjct: 121 VQAAERAEEITAHRFARGGNLRRFLAAREPKRWFRGMDGKRVYHLRGNLPDGGFERVTVY 180 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD-ISIMKFKSYTLQTESANS 235 + + D +A IL D E P + + Y Sbjct: 181 -ELAEGFTLARRIDAARMHPDGRAWILEDVEDRTFRPDGSMALERADRRRYAFDEPPDAF 239 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + I K + + L+ + + ++ E + RL L + + A Sbjct: 240 AVIAGKPDQMRWNTLIRQ-IGIRKRLGQPVTEFQLERYDRLAYPLAGI--PGALLALALA 296 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 R+ + ++ ++ +FWG + + + P + + + + L Sbjct: 297 LRRDRKGHLAAALLEAVGVT-LLFWGMQGVSSALGLSGRVAPWIASWAPNVVFLAL 351 >gi|311694208|gb|ADP97081.1| permease YjgP/YjgQ family protein [marine bacterium HP15] Length = 345 Score = 94.7 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 38/347 (10%), Positives = 102/347 (29%), Gaps = 4/347 (1%) Query: 9 LRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFC 68 +R +G + + + ++ + + + ++ + + + L +P + P Sbjct: 1 MRSVGGAMFLVMMVVLSLDLIFAFIAELDDI-RNNYQILDALWYVFLTLPRRIYDYLPLG 59 Query: 69 FAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRST 128 M L SM ++EL ++ G S ++ + A+++ + + + P Sbjct: 60 AFMGCLVGLGSMASSSELTVVRAAGVSLKRIVWSAMKPALVIVVLGVLIGEYLAPPAERV 119 Query: 129 IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYY 188 + A A A + ++ + D + D Q + Sbjct: 120 AQSYKAVALGAGSNVASASGVWHKEGDSYIHLNAVQPNGVLHGVSRFQFDDDRQLLAASF 179 Query: 189 AQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLS 248 A+ D +L + + + S +++K + +++ Sbjct: 180 AERAIYQGD--HWLLENVRTTSFEDDRTVRVDDRTLRWETGLSPGVLSVLIVKPENLSMT 237 Query: 249 FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPI 308 L + Y F K+ L + L++I Sbjct: 238 GLY-TYATYLGEQSLNASRYWLAFWKKALMPLGTAVMVLVAISFIFGPLRSVTMGFRVFT 296 Query: 309 FISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + + F F + + + +L + +LM + Sbjct: 297 GLLVGLLFKYMQDFLGPMSLVYGFNPMLAVLVPIAVSAVAGGILMRR 343 >gi|118594057|ref|ZP_01551404.1| hypothetical protein MB2181_00275 [Methylophilales bacterium HTCC2181] gi|118439835|gb|EAV46462.1| hypothetical protein MB2181_00275 [Methylophilales bacterium HTCC2181] Length = 344 Score = 94.7 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 40/343 (11%), Positives = 101/343 (29%), Gaps = 5/343 (1%) Query: 16 FLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTN 75 M ++ + +Q I + ++ + IP + P + + Sbjct: 4 IFMIMFGLISLFAFFDFIQEIGDLGKGGYGISHAMTFVILSIPGHIYETVPLAVLIGSMY 63 Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAK 135 + ++ N+EL +I +G S + ++ +IF + ++I P +Q+ Sbjct: 64 TIGQLSYNSELNVIRASGFSIKKIATSLMITGGFFAIFTLLIGDLIAPNSEKNAQQMKIG 123 Query: 136 AQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSID 195 ++ + + + + + I A+ G+ + Sbjct: 124 LTNSVVGQEFSSGFWIKDGGNFVNIENVLPDATLERINIYEFDSQFNLRTIVNAEKGAYE 183 Query: 196 LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNP 255 L + S + S+ + +++ + L Sbjct: 184 EGEWR--LENITQTILYENSVKKKSIPMGSWKSLMRPEMMNALIISPEKMSSFNLY-KFI 240 Query: 256 NNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSIS 315 + + Y +++ L P++ + ++ R K +FI + I Sbjct: 241 SYLKINNQKSTKYEVALWEKIIHPLMPLVMIIFAVPFGFL--QERSGGKFFKMFIGIIIG 298 Query: 316 FGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + I H N + I L I L + K++ Sbjct: 299 IAYQITNTLIRHLSLLNDWQPFISSLVPTLIFLCLGLYLIKRF 341 >gi|291616051|ref|YP_003518793.1| YjgP [Pantoea ananatis LMG 20103] gi|291151081|gb|ADD75665.1| YjgP [Pantoea ananatis LMG 20103] Length = 366 Score = 94.7 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 51/361 (14%), Positives = 133/361 (36%), Gaps = 19/361 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGEVPTNLVLTLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + L + S+ ++ + Sbjct: 62 LILPLSLFLAILMTLGRLYTESEITVMHACGLSKAVLVKAAMVLMLFTSVVAAVNVIWLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +Q++ A+ + L F D + + N +F+ R Sbjct: 122 PWSSRYQEQVTQNAKANPGAAALAAGQFQTSSDGSAVLFLENVKGNQFGHVFLAQLRPKG 181 Query: 183 T--HKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG ++ + Q + L+ G + + +D I F +Y ++ Sbjct: 182 NARPSVVLADSGHMEQKKDGSQIVTLDKGTRFEGTALLRDFRITDFTNYQAYVGYKQATL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + LL+ +R+E H R+T ++ L+ Sbjct: 242 DPNDVDQATFATLLS----------NKTPEFRAELHWRITLVFAVLVMALM---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ ++ + ++ + F S + + P +++++ IS + L ++ Sbjct: 289 VNPRQGRVLSMLPAMLLYLIFFLLQSSLRSSGAK-GRLDPAIWMWVVNISYLALAIVLNL 347 Query: 358 Y 358 + Sbjct: 348 W 348 >gi|288940756|ref|YP_003442996.1| permease YjgP/YjgQ family protein [Allochromatium vinosum DSM 180] gi|288896128|gb|ADC61964.1| permease YjgP/YjgQ family protein [Allochromatium vinosum DSM 180] Length = 380 Score = 94.7 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 56/357 (15%), Positives = 119/357 (33%), Gaps = 21/357 (5%) Query: 10 RCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCF 69 R + FL L +V I + L+ + V+ ++++ + I + + P F Sbjct: 17 REAAQVFLAIVLVLVLILASLMFLRTLEEVNLGGLGVDVVFRYLSLQIQRDISSLLPPAF 76 Query: 70 AMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS-- 127 + L R++EL+ + G L + L LA+ ++ ++P + Sbjct: 77 FLAILVTLARFARDSELIAMQACGVGPPRLYRTFLLLAVPVAFVTGWVALDLKPHAAAGI 136 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 +L K Q A + + + I + + + L +F++D R +T + Sbjct: 137 QQIRLQQKEQAAQIAGLQAGRFYVEEQGKVVVYIGEIDQHKLLGDVFVLDRRGEKTRLVV 196 Query: 188 Y---AQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST-IVLKAN 243 + L G S I F+ Y ++ A S+ K Sbjct: 197 SDSGRHRIEESTGDHLVTLTQGHRFDGQAGSGAYLIGDFERYEIRLADAGSAPHAFNKRA 256 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 L++ + R E RL L + +++I D R Sbjct: 257 TIPTPDLMHSDELAD----------RVELEHRLAAPLSILTLAVLAIPLVDPSPRQRTTG 306 Query: 304 KIHPIFISLSISFGVFWGFSYIIH--KIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + + ++L F F P ++ L+ L + + L+++ + + Sbjct: 307 R---MLLALLAYFSFFNLQRLAESWMAAGVTPAWLGSLWYQLAILVFVHLMLLPENF 360 >gi|282860071|ref|ZP_06269152.1| putative membrane protein [Prevotella bivia JCVIHMP010] gi|282587159|gb|EFB92383.1| putative membrane protein [Prevotella bivia JCVIHMP010] Length = 405 Score = 94.7 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 44/352 (12%), Positives = 111/352 (31%), Gaps = 4/352 (1%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPTVL 61 + + YI++ +++ + L I+ IA V + ++ + I+ IP Sbjct: 47 TLDWYIIKKFIGTYIFAILLIISIAIVFDFNENLSKFTQYHAPWRAIIFDYYANFIPYYS 106 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + +P + + + N+E++ + G S L++P + IL+S+ F + + Sbjct: 107 NLFSPLFVFIAVIFFTSKLAGNSEVIAMLAAGVSFKRLMRPYMISCILISVLTFYLNSFV 166 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + + + E + + + G +V + Sbjct: 167 IPHGTVIRQNFESLYRNNKKNTSAENVQLQVAKNTVAYIQHYDDHYKRGYGFSLVKFENK 226 Query: 182 QTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + A D + +++ ++ + + I+ K L E + Sbjct: 227 KIVSHMTAMEIQYDTVADTKYHWKVSNYKIRILRGLKEHITTGTEKDTMLLMEPTDLVYS 286 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + LLN + + Y EFHKR+ I +I + + ++ Sbjct: 287 KGQQETFTSPELLNYISKQTSRGASNVVQYEIEFHKRIAMSFSAFILTIIGLSLSARKRK 346 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 + + + + P + +F + + Sbjct: 347 GGMGLYLGIGLGLSFGYILLQTVSATFAIQANTPPILAAWIPNVIFAFIAYY 398 >gi|190572727|ref|YP_001970572.1| putative transmembrane permease [Stenotrophomonas maltophilia K279a] gi|190010649|emb|CAQ44258.1| putative transmembrane permease protein [Stenotrophomonas maltophilia K279a] Length = 360 Score = 94.7 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 48/356 (13%), Positives = 124/356 (34%), Gaps = 14/356 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L +SFL + + ++ ++ ++ + ++ +L G Sbjct: 1 MLKLDRYLLGDFVQSFLATLIVLLVVSVGGVLVDILGNIADGRLPAKLLFSQLGLQFIAY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP++ P + + + R++E+ +I G L++P+L L + + + Sbjct: 61 LPLILPLALMLGLLLAVARLYRDSEMAVITAIGVGPRRLLRPLLMLVVPVVALVGACSLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +Q+ +A ++ + LE F +L + + +S +P+ T G + + Sbjct: 121 LGPWAGRVAEQMIIEANRSVLMAGLEPGRFTQLPNGGVVYLSSISPDGTQLGRVFLQRQK 180 Query: 181 TQTHKIYYAQSGSIDLDRQAII---LNDGEVHRKSPISK-DISIMKFKSYTLQTESANSS 236 ++ A G + + L+DG D + F + + Sbjct: 181 DDRLEVVSAAGGRMFFEGARQRFLELDDGHQVEGPVAGGLDYRLATFARNDVALPDGAQT 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + +++ H+RL L + F L+++ Sbjct: 241 RTGDDPELMPTTQLF----------GDDRPEAQAQLHRRLAPPLIALAFALLTVPLGRSS 290 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 ++ ++ ++ + + + S I + P +I++ Sbjct: 291 PRQQRYGRMMLALMAYMVGTNLMFIGSGWIANGKIPPALGLWWLTLPLLALAIWMY 346 >gi|120611823|ref|YP_971501.1| permease [Acidovorax citrulli AAC00-1] gi|120590287|gb|ABM33727.1| permease YjgP/YjgQ family protein [Acidovorax citrulli AAC00-1] Length = 365 Score = 94.7 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 46/366 (12%), Positives = 115/366 (31%), Gaps = 10/366 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPT 59 MK+ I R + L + + + ++ + V ++ L IP+ Sbjct: 1 MKTIRWLIYREALAAVGFVTLGFLALFFFFDMVDELRYVGRVQGYQMSHALLYVSLGIPS 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 L + P + T V+ +++E I+ +G + ++ +L L + + F + Sbjct: 61 HLYELLPITVLIGTIFVMARFAQSSEFTIMRTSGLGPWSALRTLLVLGLGFVMLTFTVGD 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P + + A+ +T L R D + ++ + Sbjct: 121 YLAPATDRLAQLVRARYLGQITTGATGAWLKERQGDRSVAVNVRALRHDGGMSNVRIFEF 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK-----SYTLQTESAN 234 D Q+ + + A L D + + + ++ + S Sbjct: 181 DGDGRLASTVQAAAGEFGADAWELRDVKRSVFHRRGEAEAHVERLQEASFRWPTHISSDM 240 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + +LK + L + + + Y EF +++ + ++ ++S+ A Sbjct: 241 VAASLLKPDRMATIDLFQ-YIRHLESNGQAAQKYEIEFWRKVFYPMSCLVMVVLSLPFAY 299 Query: 295 KRALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFL--FCISSIFL 351 + ISF + F Y + +P+ + F Sbjct: 300 LHFRSGGIAGYVFGGVMAGISFFLLNNVFGYAGNLQNWSPWLTAAAPGIIYSLLSLGAFG 359 Query: 352 LMIKKK 357 ++ ++ Sbjct: 360 WLVLRR 365 >gi|322506460|gb|ADX01914.1| permease [Acinetobacter baumannii 1656-2] gi|323516339|gb|ADX90720.1| permease [Acinetobacter baumannii TCDC-AB0715] Length = 350 Score = 94.7 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 50/339 (14%), Positives = 113/339 (33%), Gaps = 14/339 (4%) Query: 18 MSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVL 77 M + I ++++ + + +IL I GY +P L ++ P F + V Sbjct: 1 MVIALLTLIMMGGRLIKYFGVAAQGRLDASILFSIIGYRLPEFLTLILPLGFFIGLMLVF 60 Query: 78 TSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQ 137 + + E+ +++ +G SR L + ++ + ++ + + + P ++L+ Sbjct: 61 GRLYVDHEMAVLNGSGVSRHQLARLLIPMTLVYMVCQSVLMLWMTPWGLREFEKLTTTQA 120 Query: 138 LALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLD 197 + F + F S L+ IF + + Sbjct: 121 VRTGFDLVRPREFISSGPYTIYAGSLSEDRKNLKDIFFYQRAAKEGKPDVMILAKEATRV 180 Query: 198 R------QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLL 251 + L G + P + +F+SY L+ E+ + + L Sbjct: 181 EVANDTANVVDLVQGRRYEIFPGQPKYTQAEFQSYRLRLENDKDVKFESGDVEALSTSKL 240 Query: 252 NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFIS 311 N+P RSE RL +I ++S+ ++ + ++ P Sbjct: 241 FSKANDPV--------VRSELGWRLFGPFTIIIALMLSVALSEVSPRQGRYYRLIPSIFI 292 Query: 312 LSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 + + I K E + + P+ L +++F Sbjct: 293 FASLIVLMIAIKTRISKGELDIWAYPVALLVYAIAAALF 331 >gi|92117864|ref|YP_577593.1| permease YjgP/YjgQ [Nitrobacter hamburgensis X14] gi|91800758|gb|ABE63133.1| permease YjgP/YjgQ [Nitrobacter hamburgensis X14] Length = 365 Score = 94.7 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 48/360 (13%), Positives = 107/360 (29%), Gaps = 14/360 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTV 60 + Y + L I + ++ ++ + S ++ S ++ + S + +P + Sbjct: 6 NTLGRYFASRFVVAALGVFASIFLLLVLVDYIEMVRRTSGLASASAIMVAETSLFRVPQL 65 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L +TPFC + +++R EL++ G S I P L A++L + + N Sbjct: 66 LEKLTPFCVLIGAMTCYLALSRRLELVVARAAGISAWQFISPALACALVLGVLATTAYNP 125 Query: 121 IEPKCRSTIKQLSAKAQLA------LTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF 174 + R K++ A+ + S N + L G+ Sbjct: 126 MSANLRELSKKMEAELFGSVSGGGLQEASGFWINQVTDDGQAIINAARSEQQGVRLTGLT 185 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + T + + D + L G R + S + F T +A Sbjct: 186 VFRFDPDSTFRERIEAREATLEDGRW--LFKGV-RRFTLDSPPVEQETFVLPT-SLTAAQ 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + L + YR ++HK + Q +++ + Sbjct: 242 VRNSFSTPETVSFWQL-PGYIRSSESSGFATAGYRLQYHKLIAQPFLLAAMVMLAASVSL 300 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R + + F ++ + C+ + ++ Sbjct: 301 --RFFRFGGVQKMVLSGVGSGFLLYVLSKVTEDLSKAELMNPIAAAWLPVCVGGLAGFLV 358 >gi|325295269|ref|YP_004281783.1| permease YjgP/YjgQ family protein [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065717|gb|ADY73724.1| permease YjgP/YjgQ family protein [Desulfurobacterium thermolithotrophum DSM 11699] Length = 354 Score = 94.7 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 56/351 (15%), Positives = 117/351 (33%), Gaps = 4/351 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + Y+ R F+++ L + + VI + +++ S + Y +P Sbjct: 3 KRLDRYVFIETLRYFVLTLLTFMVLFIVIDFVSKMDTFLKSG--IADGFLYVIYRLPLYT 60 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 V P + T L++ + + EL ++ G S P++FLA L SI F+ ++ Sbjct: 61 VRVIPIATLIATMVTLSNFSFSNELTVVKALGISVYRFSFPIIFLAFLASILSFLIGELV 120 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 PK S K + K + F ++++F+ D+ +Y + I Sbjct: 121 VPKSISLSKSIYYKVKENKNFHVSGKSIWFKKDEK-TFVFMEYVNPAKSEAKRISIFFLG 179 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + ++ + I + + + K L + ++ Sbjct: 180 KEFSPTKRIDALYGINIKDDIWKLKNCFERKLKELKTTKISEKEINLGIGKKDLIFTQIE 239 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + SFLL Y + + +L L P++ +I I ++ Sbjct: 240 TETMS-SFLLYKVIKQLKRAGYDTTGYLVDLYSKLAISLLPLVVAVIGIPLGVFNPRNKK 298 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 + + + FS + P+Y +F + LL Sbjct: 299 GYTLVIAAALIVFMWITISFFSSLGKSGVLPPFYSAFAPEVMFLSIGLLLL 349 >gi|329118130|ref|ZP_08246842.1| YjgP/YjgQ family permease [Neisseria bacilliformis ATCC BAA-1200] gi|327465790|gb|EGF12063.1| YjgP/YjgQ family permease [Neisseria bacilliformis ATCC BAA-1200] Length = 431 Score = 94.7 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 46/347 (13%), Positives = 122/347 (35%), Gaps = 21/347 (6%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 ++ + + + + I+ + Q + + + + + + + G+ + P++ Sbjct: 74 FIKELTYTAVGIFVVILAVLVSTQAVNLLGRAADGRVAADAVAALIGFWTLGMTPLLLVL 133 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 + VLT R++E+ + + G S ++PVL A+ + + + + P Sbjct: 134 TAYISVLTVLTRFWRDSEMAVWLSCGLSLKQWLRPVLAFALPFAALVAAMQLAVLPWAEL 193 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDD---LYIKISKYNPNNTLQGIFIVDSRDTQTH 184 ++ + + S +E F L +Y + + ++ +F+ + D Sbjct: 194 RSREFAELLKQKQELSLVEAGEFRTLGKRNGRVYFVETFDTESGVMKNLFLREQDDKGRE 253 Query: 185 KIYYAQSGSIDLDRQAIILNDGEVHRK--SPISKDISIMKFKSYTLQTES-ANSSTIVLK 241 + +A+ G L L + +R P D + + F+ +L + V Sbjct: 254 NVVFAKEGRFALTDHKRTLELTQGYRYGGIPGEADYNRVGFEHLSLVISTTPKIVNPVDH 313 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + L+ YR+E R++ L VI ++++ + Sbjct: 314 RRTIPTARLI----------GSDNPQYRAELMWRVSLPLAAVILAILAVPL---SYFNPR 360 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCI 346 + I ++ G + + + I + ++ L L + + Sbjct: 361 TGHTYNILFAIGFFLVYQNGLTLLRNAIENGKIGFWAGFLPLHILML 407 >gi|92115032|ref|YP_574960.1| permease YjgP/YjgQ [Chromohalobacter salexigens DSM 3043] gi|91798122|gb|ABE60261.1| permease YjgP/YjgQ [Chromohalobacter salexigens DSM 3043] Length = 354 Score = 94.7 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 41/354 (11%), Positives = 105/354 (29%), Gaps = 6/354 (1%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ YI R + + L+ + I+ + VI + + V +L +P Sbjct: 5 RFDRYIARNVLAAMLVVQVMILGLDLVISYINDLGDV-EGDYGALDVLLYLLMRLPWRFY 63 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + L SM + EL ++ +G S ++ + L+ I + Sbjct: 64 QYAPVGVLIGALIGLGSMASSNELTVMRASGRSLARILWGAMKPLGLVIIVTMAISEWVS 123 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + QL + L E ++ + D + + ++ + + TQ Sbjct: 124 PVT-EQYAEAWRLEQLEGEGAILSERGGWQREGDDFYRFGTIRADDVVIDVTRYHFDGTQ 182 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 +A + + + + R + +++ A + ++ Sbjct: 183 LVSATHADRAVWEDGSWQWV--NVDTTRFEDGRTVVDSQPRQAWETSFTPAQLNRLLRPL 240 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 Q+ S L + + F +++ L++ Sbjct: 241 ESQSPSDL-WRYASYLGNQGLEATQPLLYFWQKMLLPFTLAGLMLVAASFVFGPLRTVAA 299 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 I + +SF + +L + + ++++++ Sbjct: 300 GTRVFYGIIVGVSFKYLQDLLAPASMLFGFSPIFAVL-VPTVACYVLGIVLLRR 352 >gi|126661397|ref|ZP_01732459.1| hypothetical protein CY0110_10922 [Cyanothece sp. CCY0110] gi|126617328|gb|EAZ88135.1| hypothetical protein CY0110_10922 [Cyanothece sp. CCY0110] Length = 353 Score = 94.7 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 37/346 (10%), Positives = 111/346 (32%), Gaps = 19/346 (5%) Query: 27 AWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTEL 86 + + + V S L +I +P P + T ++ ++EL Sbjct: 7 VAIGYLSDLADKVVDSNLPLMQASEILLLKVPEFTAYALPISVMLSTLLTYGRLSNDSEL 66 Query: 87 LIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLE 146 + + G S LI P + +++ ++ F+ ++ P + + + Sbjct: 67 IAFRSCGVSLYRLIIPAMVMSLAVTGVTFLMSELVVPAANYRATAILVEYLQEDHPYWQN 126 Query: 147 ENLFFRLDDDLYI------------KISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSI 194 +++F+ + + + ++ L+ + +++ + + ++I + S + Sbjct: 127 KDIFYPDYEQVTLPNGDQEKRLKHLFFAEQFDGQHLKTLTVLEWLEERLNRIVVSDSATW 186 Query: 195 DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA--NSSTIVLKANDQNLSFLLN 252 + + +G +++ S + F+ L A + + N+ Sbjct: 187 NGQEETWDFFNGTIYQLSSDASYKEAYPFEHRQLPLTKAAFEFALQGRDPYEMNIIQARQ 246 Query: 253 PNPNNPNY-RPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFIS 311 + L ++ ++L V+FG++ Q + +S Sbjct: 247 YMKILKMMGDDKKLRMFQVRIQQKLAFPFICVVFGVVGSALGATPQ---QMSRATGFGLS 303 Query: 312 LSISFGVFWGFSYIIHKIEQNPYYIPIL-YLFLFCISSIFLLMIKK 356 + I F + I + +L ++ ++ + Sbjct: 304 VVIIFSYYLLGFLIGSLGLMGLISPVLAGWLPNLLGLAMGGWLLYR 349 >gi|254428344|ref|ZP_05042051.1| putative permease, YjgP/YjgQ family [Alcanivorax sp. DG881] gi|196194513|gb|EDX89472.1| putative permease, YjgP/YjgQ family [Alcanivorax sp. DG881] Length = 353 Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 49/357 (13%), Positives = 96/357 (26%), Gaps = 5/357 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y R + L IV + + + + + L+ P Sbjct: 1 MTLLKRYFWRAVMIPTLAILFIIVGLDCLFGFVYELE-FLRGNYQVMEALQFILTTTPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 P + T L + + EL +I G S + + VL ++L I Sbjct: 60 FYEYMPMAILLGTLIGLGLLANSGELSVIRAAGVSTLKVSWLVLRPVLVLIILSIPLGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A+ + + R + + S + Sbjct: 120 LTPYSEQVAQSNRSMAEGGGEALRSKYGYWHREGPEFIHINAVQPNGVLHGLTRYRFSDN 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y D L R + + + S +VL Sbjct: 180 QKLTETQYVDRAIYQGD--FWSLEGIHGTRLFDDHAETYQKDQGEWQTELTPQLLSIVVL 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + ++ L LL + Y F ++L L + LI+I Sbjct: 238 QPDNLALVKLL-EYTRYLKRQGLETADYMLSFWQKLFMPLATIGMVLIAISFVFGPLREV 296 Query: 301 QRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 I + F F + +P +L L + ++LL + Sbjct: 297 TMGLRLTAGIVAGLIFHYGQQFFGQLSLVFHTDPLLAAMLPPSLCLVLGVWLLQRVR 353 >gi|296162276|ref|ZP_06845070.1| permease YjgP/YjgQ family protein [Burkholderia sp. Ch1-1] gi|295887430|gb|EFG67254.1| permease YjgP/YjgQ family protein [Burkholderia sp. Ch1-1] Length = 365 Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 55/362 (15%), Positives = 123/362 (33%), Gaps = 16/362 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ + +++ + +S +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTLVLTTMMIRIVGFAASGEIDPRDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT +++E+++ ++G S IKP+ A + I + + Sbjct: 62 IMLVATLFVSILFVLTRWYKDSEMVVWLSSGVSLTQFIKPIGIFATPIIILIMFFVFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P K + A+ Q S L F + + + + + + Sbjct: 122 PWSNQQSKLIRARFQQRDEVSLLAPGQFRESATSHRVFFIEKMSPDQARVENVFVTSTEN 181 Query: 183 THKIY----YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + + ++L +G + P D IM+F+ Y ++ +S Sbjct: 182 GKVNVVVSKTGHTETRKNGDRFVVLENGRRYDGQPGQPDFRIMEFERYGVKIQSQPVVNT 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD-KRA 297 L+ L NP +N +EF R L + L++I A Sbjct: 242 PTTTGTPTLTLLRNPTNDNL-----------AEFAWRAGLPLIALNLMLLAIPLAHQNPR 290 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 R + + I L+ S + S+I P + L++ + I + + + Sbjct: 291 RSRTINLVMAVLIYLTYSNLLNVVQSWIEQGKMSFPVGLVGLHVIVAAIVAFIFWLRVRN 350 Query: 358 YT 359 Sbjct: 351 RP 352 >gi|116690487|ref|YP_836110.1| permease YjgP/YjgQ family protein [Burkholderia cenocepacia HI2424] gi|170733808|ref|YP_001765755.1| permease YjgP/YjgQ family protein [Burkholderia cenocepacia MC0-3] gi|116648576|gb|ABK09217.1| permease YjgP/YjgQ family protein [Burkholderia cenocepacia HI2424] gi|169817050|gb|ACA91633.1| permease YjgP/YjgQ family protein [Burkholderia cenocepacia MC0-3] Length = 364 Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 52/364 (14%), Positives = 123/364 (33%), Gaps = 16/364 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ I +++ + +S +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTIMLTTMMIRIVGYAASGEIDPRDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT R++E+++ +G S LIKP+ A + + + + Sbjct: 62 VMLVVTLFVSILFVLTRWYRDSEMVVWLASGVSLTRLIKPIGVFATPIILLITFFAFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P K + A+ Q S L F + + + + + + + Sbjct: 122 PWSNQQSKMIRARFQQRDEISLLAPGQFRESAANHRVFFIEKMSPDQSKVQNVFVTSTEN 181 Query: 183 THKIY----YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + + ++L DG + +P + IM+F+ Y ++ S + + Sbjct: 182 GKVNVVVSQTGHTETSKDGDRFVVLEDGRRYDGTPGQPNFKIMEFERYGVKITSKPVTNV 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD-KRA 297 + L NP +N +EF R L + ++ I + Sbjct: 242 QTTNSTPTPDLLRNPTRDNL-----------AEFAWRAGLPLIAINLMVLGIPLSYQNPR 290 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 R + + I L+ S + + I + L++ + I + + + Sbjct: 291 RSRTINLVMAVLIYLTYSNLLNVVQAQIEQGKMSFGVGLVGLHVVVAAIVAFIFWLRVRN 350 Query: 358 YTKI 361 + Sbjct: 351 RPLL 354 >gi|225164329|ref|ZP_03726596.1| permease YjgP/YjgQ family protein [Opitutaceae bacterium TAV2] gi|224801063|gb|EEG19392.1| permease YjgP/YjgQ family protein [Opitutaceae bacterium TAV2] Length = 379 Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 49/378 (12%), Positives = 113/378 (29%), Gaps = 26/378 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQIL-QRINLVSSSTESLNILLKISGYLIPT 59 MK + +I + + + L F+ V L + + ++ + K+ L+P Sbjct: 1 MKILQRHIFLSVLTTCFAAVLLFTFVLIVGNALKDLLQFALAGQITMPDMAKLLLLLVPY 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 V+ P VL M+ N+E+ + G + +P+L LA+ S+ I Sbjct: 61 VVAFALPIGVLTGVLLVLGRMSGNSEITAMRAAGLGIAFVTRPILLLAVAGSVICLIVNY 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 P R K + + + F R + + + + + R Sbjct: 121 YYMPMTRKPYKNMVPNIVRSDPLKLITARTFLREFPNAVVYVDEKDGTVLRDLWVWELDR 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK-----------SYTL 228 D + + ++AQ G + + ++ L + + F + Sbjct: 181 DKRVVRAHHAQEGELAYNEESHKLVLKVREGTTELRDRDDPEAFNKVVTVSTFGSAEFEF 240 Query: 229 QTESANSSTIVLKANDQNLSFLLNPNPNNPN--------YRPELLETYRSEFHKRLTQWL 280 + + D L +K+ L Sbjct: 241 SLSNLFGRITTRQKLDWMTLEELKAQREQLTAAPDADTPEGQMRRMQVDVTLNKKAANAL 300 Query: 281 FPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP--I 338 + F LI + K + + + +++ S + +E P + P I Sbjct: 301 AVLAFALIGVPLGIKVSRRETSANLGMALL----LILIYYMLSGVAGWLEAYPRWRPDLI 356 Query: 339 LYLFLFCISSIFLLMIKK 356 +++ + ++ + Sbjct: 357 VWVPPLLFAGFGAWLLSR 374 >gi|254473284|ref|ZP_05086681.1| permease YjgP/YjgQ [Pseudovibrio sp. JE062] gi|211957400|gb|EEA92603.1| permease YjgP/YjgQ [Pseudovibrio sp. JE062] Length = 363 Score = 94.3 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 47/362 (12%), Positives = 99/362 (27%), Gaps = 14/362 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTV 60 ++ LYI + +S L LF + + +L+ + SL + IS +P + Sbjct: 4 RTLSLYISKRFLKSILALFLFAAVLILLFDVLELVRRGGDREGFSLLRIAAISALRVPLL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V PF + +++R+ EL++ G S P L + + I I N Sbjct: 64 LEQVIPFAVLFGSIWAFVTLSRSLELVVARAAGISVWQFTAPALLTGLFIGIASVIGYNP 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFS-----YLEENLFFRLDDDLYIKISKYNPNNTLQGIFI 175 + +++ D + + Sbjct: 124 GAVYLQQKSDEVAEGLFSVEQTYLLEGSGEVWLRQNGTDGESVLHARHIGGQGATLNGVT 183 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + S D Q ++ L L D V+ + ++ Sbjct: 184 IFSFDRQGEFSERIEARRAVLAEGMWRLTDAVVYALDTDPQHYDNYSVSTF---LTPTEV 240 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + + L Y ++ L + L V +I+ + Sbjct: 241 KESIGSPESISFWSLPR-FIELSQRAGLPAYRYSLQYQTLLAKPLLLVAMIVIAAAVSL- 298 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN--PYYIPILYLFLFCISSIFLLM 353 + R I + F ++ P + +F + F ++ Sbjct: 299 -RVSRFGGIGRLIIWGIIAGFVLYAVSEISKDLGGAGIVPTAVAAWAPGVFGVLMGFTIL 357 Query: 354 IK 355 + Sbjct: 358 LN 359 >gi|89054304|ref|YP_509755.1| permease YjgP/YjgQ [Jannaschia sp. CCS1] gi|88863853|gb|ABD54730.1| permease YjgP/YjgQ [Jannaschia sp. CCS1] Length = 364 Score = 94.3 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 40/361 (11%), Positives = 99/361 (27%), Gaps = 13/361 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 LYI R SF + + I I + ++ + S + + +L+++ +P + Sbjct: 2 ILHLYIARRFLVSFGIVLAVFMAILLPIDMADQLRRIGSD-QGFSAVLQLALLNLPRSIT 60 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + T + + R +EL+++ G S + + +A+++ + N + Sbjct: 61 GLMPLFVMLATLVLFLGLARTSELVVVRAAGRSALKSAASPVIVALIIGGLSLLILNPLV 120 Query: 123 PKCRSTIKQLSAKAQLALT------FSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 A+ + + + + + L Sbjct: 121 ATTARQYDLTLARLSGLESRSVSVTGEGFWLRQGTGSEQTVIRASATNSDGTHLFDASFF 180 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ--TESAN 234 ++ + + + + F + TL Sbjct: 181 TFDADGALLERMDAREAVLARAAWTLTDVKRWPLAQSDNAEADAELFPTLTLPSTLTPEQ 240 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + L N +R+ F +L+ L LI A Sbjct: 241 IRDSFGNPETVPIFEL-PGFIRQLNDAGFAALQHRTWFQMQLSSPLLLAAMVLIG--AGF 297 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-PYYIPILYLFLFCISSIFLLM 353 R K + ++ + FGV + + E + + + + Sbjct: 298 TMRHTRFGKTGVMVLGAILLGFGVVFLRRFAEVLGETGQLAASLVAWTPPIAAILLAIGF 357 Query: 354 I 354 + Sbjct: 358 L 358 >gi|304396396|ref|ZP_07378277.1| permease YjgP/YjgQ family protein [Pantoea sp. aB] gi|304355905|gb|EFM20271.1| permease YjgP/YjgQ family protein [Pantoea sp. aB] Length = 366 Score = 94.3 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 50/356 (14%), Positives = 124/356 (34%), Gaps = 17/356 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGEVPTNLVLTLLGLGVPQMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + L + S+ ++ + Sbjct: 62 LILPLSLFLAILMTLGRLYTESEITVMHACGLSKAVLVKAAMILMLFTSVVAAVNVIWLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +++ A+ + + F D + + N +F+ R Sbjct: 122 PWSSRYQDEVTQNAKANPGAAAMAAGQFQTSGDGSAVLFVENVKGNNFGNVFLAQLRPKG 181 Query: 183 T--HKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + L+ G + + +D I F +Y ++ Sbjct: 182 NARPSVVLADSGHLEQRKDGSQVVTLDKGTRFEGTALLRDFRITDFTNYQAIVGYKAATL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + +LS L+ +++E H RLT ++ L+ + + Sbjct: 242 DPNDSEQASLSDLV----------ANKTPDFQAELHWRLTLVFAVLVMALMVVPLSVVNP 291 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + + P + I F + K +P +++ + +L+ Sbjct: 292 RQGRVLSMLPAMLLYLIFFLLQSSLKSSGAKGRLDPALW--MWVVNISYLVLAVLL 345 >gi|261855831|ref|YP_003263114.1| permease YjgP/YjgQ family protein [Halothiobacillus neapolitanus c2] gi|261836300|gb|ACX96067.1| permease YjgP/YjgQ family protein [Halothiobacillus neapolitanus c2] Length = 371 Score = 94.3 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 52/342 (15%), Positives = 122/342 (35%), Gaps = 19/342 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+LR + L L ++ I + + ++ + + +++ + G+ + Sbjct: 1 MPILNRYLLREASVATLGVTLIVMLIMLANLLARSLSAAAEGSLPSSLIPAMMGFNAVKL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V P + L M+R++EL ++ G L + +L+LAI +S+ Sbjct: 61 LIYVLPVGLFIGLMFALGRMSRDSELTVLRACGYGPRHLSQAILWLAIPVSLLTASISLF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + ++ A+ F+ L F + N IF + Sbjct: 121 AYPALQQVQSRMIDSARSQQVFNQLPVGRFIEEPSGKAVLYIGSKSGNGYSDIFAFNEPT 180 Query: 181 TQTHKIYYAQSGSIDLDR--------QAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 + + + ++L G + +D S++ ++++ + Sbjct: 181 NTKNARQKPGVEMAPFGKLMTDSAGHRYVVLEQGRRIQGVAGEQDWSVIDYQTHEILVPG 240 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + + +L L + P + ++EF+ RL+Q L ++ LI++ Sbjct: 241 RADTENTQENKKSSLQLLHSNLPGD-----------QAEFYYRLSQALTVLVLALIAVPL 289 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY 334 A + + ++ F+ ++ F + I E N + Sbjct: 290 AQAKPRSGRYGRLFWAFLLYALYFNLIALTENAIKHGELNLW 331 >gi|330836571|ref|YP_004411212.1| permease YjgP/YjgQ family protein [Spirochaeta coccoides DSM 17374] gi|329748474|gb|AEC01830.1| permease YjgP/YjgQ family protein [Spirochaeta coccoides DSM 17374] Length = 363 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 120/356 (33%), Gaps = 9/356 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI+R FL + + + + ++ + + +L+++ IP Sbjct: 1 MKILDRYIMRSFLTVFLSALGICTLLLVAVDLFTNLDSYAKNEVPFFAILRLTVLYIPDA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V T L ++ + EL+ I G I +I P++ + I +S+ + Sbjct: 61 VSLVISPAVIFSATLTLALIHSSNELIPIFCAGIPYIRVIIPMMAVGICVSMTTLAATEY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I R ++ + + T F + +Y+ ++ RD Sbjct: 121 IVIPSRVNRVEVQTEYTGSQTSKDNRNITFVDASGRFVLHAKRYDATRQRIMNMVLIERD 180 Query: 181 ---TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK--FKSYTLQTESANS 235 + A D + IL+D + + +S + S L E Sbjct: 181 GPGGRMTGRTSAGMAQWDETERRWILSDVSIQNFTEGDTVLSFHEDTLMSDILDIEPGLF 240 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 S + + + L N P T +++++R +L P I +I+ Sbjct: 241 SYLGTDIKNMDRKTALWYLDNMKGLDPYQWATAATDYYERAYSFLTPFILMIIACS---- 296 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 ++ + ++ VF+ + + + P+ +FL I L Sbjct: 297 MNYQYKKNVLLFSILTSIGIAIVFYVTQLVTLLLAKQYVISPLTGVFLPLGLMIAL 352 >gi|254247471|ref|ZP_04940792.1| hypothetical protein BCPG_02269 [Burkholderia cenocepacia PC184] gi|124872247|gb|EAY63963.1| hypothetical protein BCPG_02269 [Burkholderia cenocepacia PC184] Length = 364 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 52/364 (14%), Positives = 123/364 (33%), Gaps = 16/364 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ I +++ + +S +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTIMLTTMMIRIVGYAASGEIDPRDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT R++E+++ +G S LIKP+ A + + + + Sbjct: 62 VMLVVTLFVSILFVLTRRYRDSEMVVWLASGVSLTRLIKPIGVFATPIILLITFFAFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P K + A+ Q S L F + + + + + + + Sbjct: 122 PWSNQQSKMIRARFQQRDEISLLAPGQFRESAANHRVFFIEKMSPDQSKVQNVFVTSTEN 181 Query: 183 THKIY----YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + + ++L DG + +P + IM+F+ Y ++ S + + Sbjct: 182 GKVNVVVSQTGHTETSKDGDRFVVLEDGRRYDGTPGQPNFKIMEFERYGVKITSKPVTNV 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD-KRA 297 + L NP +N +EF R L + ++ I + Sbjct: 242 QTTNSTPTPDLLRNPTRDNL-----------AEFAWRAGLPLIAINLMVLGIPLSYQNPR 290 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 R + + I L+ S + + I + L++ + I + + + Sbjct: 291 RSRTINLVMAVLIYLTYSNLLNVVQAQIEQGKMSFGVGLVGLHVVVAAIVAFIFWLRVRN 350 Query: 358 YTKI 361 + Sbjct: 351 RPLL 354 >gi|254446201|ref|ZP_05059677.1| putative permease, YjgP/YjgQ family [Verrucomicrobiae bacterium DG1235] gi|198260509|gb|EDY84817.1| putative permease, YjgP/YjgQ family [Verrucomicrobiae bacterium DG1235] Length = 392 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 58/380 (15%), Positives = 130/380 (34%), Gaps = 29/380 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQ-RINLVSSSTESLNILLKISGYLIPTVL 61 F YIL + + L + L FI + + ++ +++ ++ ++ G L+P V Sbjct: 2 LFHRYILWNVAVTSLGAILMFAFIVLLGEFMRDLFGMLAEGQVTVGTCFRLVGLLLPYVF 61 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + ++ E++ + +G S L V+FLAIL + Sbjct: 62 VHALPMGLLTGIMISMGRLSSQGEVVALRASGVSIARLASSVVFLAILGVVTSIAVNFEF 121 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + A+A ++ F + + + + Sbjct: 122 GPRAINAYRGEIAEAVRTGPLRFIIPRKFVKDFPGFVVYAGAKEDDVLRELWIWKLDDGG 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILND-------GEVHRKSPISKDISIMKFKSYTLQTESAN 234 +T + A+SG+++LD L ++ K P + + E Sbjct: 182 RTTSLIKAESGTLELDEYEQTLRLLLRSGSIAKMDSKDPEDFSEIRGELSFGSFPLEFPI 241 Query: 235 SSTIVLKAN---------------DQNLSFLLNPNPNNP--NYRPELLETYRSEFHKRLT 277 S + K + L LL+ ++ +L + FH++L Sbjct: 242 DSILEKKPRRVKMYWLVGGELMSEWRRLDKLLSGEIDSEVRREAARMLAEAKMAFHEKLA 301 Query: 278 QWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP 337 + + F L++I +++ + I+L + + + I Q + Sbjct: 302 AGVSVLSFALMAIPLGISVQ---RKETSANLGIALGLGVLYYLMTALIGWGGGQGMPFPH 358 Query: 338 IL-YLFLFCISSIFLLMIKK 356 +L ++ F + I L +I + Sbjct: 359 LLYWIPNFLLQGIGLWLIYR 378 >gi|94987324|ref|YP_595257.1| permease [Lawsonia intracellularis PHE/MN1-00] gi|94731573|emb|CAJ54936.1| predicted permeases [Lawsonia intracellularis PHE/MN1-00] Length = 384 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 45/360 (12%), Positives = 110/360 (30%), Gaps = 5/360 (1%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + I R F + ++ + + + +Q +L + +L + Y++P L Sbjct: 4 LLQRQIFRESTYIFFLVVGALLTLIIINRAIQMRDLFIGLKLEILDVLILFSYMVPLFLI 63 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + MN + EL+ + +G S ++ L + ++ Sbjct: 64 LVIPIACMLGVFLTFLRMNLDKELIALKASGISIYQMLPAPLAFSFFCTLLTLWISLFWI 123 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP-NNTLQGIFIVDSRDT 181 K ++ +F + + +P + L I + D Sbjct: 124 AWGMEQFKTTLLDIARTKVKISIQPGVFNNNFPGFVLFARQVDPLSGELHQILLEDRSQK 183 Query: 182 QTHKIYYAQSGSIDLD----RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 H + A +G+I+ + L +G ++ S + + + Sbjct: 184 DRHLVILAPTGTIETNPTKGELIFNLTNGNIYTMSLNKTSFLSFDQYLVRIPLTTLLKNI 243 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + +S+ N + E HKR + + ++ A Sbjct: 244 NFNELRPKEMSWERLIKEYNITNTMQYQNKISVELHKRWAYPAACIALTIFALPLAIMFE 303 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ + I I +G+ P L LF + ++ + + + Sbjct: 304 GIHRQFGLILALIMFFIYYGLMSFGFSTGESGTIPPAIGLWLPNILFFLLGLYGIYLTSR 363 >gi|89900898|ref|YP_523369.1| permease YjgP/YjgQ [Rhodoferax ferrireducens T118] gi|89345635|gb|ABD69838.1| permease YjgP/YjgQ [Rhodoferax ferrireducens T118] Length = 368 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 53/369 (14%), Positives = 128/369 (34%), Gaps = 13/369 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRI---NLVSSSTESLNILLKISGYLI 57 MK+ I + + L + + + ++ I S + L L +I Sbjct: 1 MKTLRRLIYGEVLYAVAFVTLGFLSLFFFFDFVEEIQAVGRYSEAGYRLVHALTFVALMI 60 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 P+ L + P + T V+ + +++E I+ +G +K +L L + + F Sbjct: 61 PSHLYELLPIAVLIGTIFVMARLAQSSEFTILRTSGLGPWRALKALLLLGLGFVVLTFAI 120 Query: 118 ENIIEPKCRSTIKQLSAKAQLALTFSYLEEN-LFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + I P + L A+ Q ++T + + + +S P+ +++G+ + Sbjct: 121 GDYISPPADRAGQLLKARYQGSITVGQTGAWLKEQQTNAQYAVNVSAMAPDGSMRGVRVF 180 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK-----SYTLQTE 231 + + + A L+ P D + + + Q Sbjct: 181 EFDNQGFLMSTLQAESAQFGADDAWNLSRVSRTEFPPRDADTARIDRAQLDSFRWPNQIS 240 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 + + +LK + L + ++ + Y EF K++ L ++ ++++ Sbjct: 241 AEMVAAALLKPERMSTIDLFQ-YIQHLRANSQVAQRYEIEFWKKVFYPLSCLVMVVLALP 299 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFLFCISSI- 349 A + ISF + F Y+ + P+ L ++ + S+ Sbjct: 300 FAYLHFRSGGIATYVFGGVMAGISFFLLNNVFGYMGNLQNWQPWLTAALPGMIYLVLSLT 359 Query: 350 -FLLMIKKK 357 F ++ ++ Sbjct: 360 AFGWLVLRR 368 >gi|320451335|ref|YP_004203431.1| hypothetical protein TSC_c22800 [Thermus scotoductus SA-01] gi|320151504|gb|ADW22882.1| hypothetical membrane spanning protein [Thermus scotoductus SA-01] Length = 347 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 49/342 (14%), Positives = 111/342 (32%), Gaps = 14/342 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ + Y+LR + F + IV + + + + + + LL Y P Sbjct: 1 MKTLDRYLLREVLAHFSLGLAVIVLLFLAGAVYEVLAPLVAKGADPYTLLLYLFYRTPEA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + +L+ + ++EL + G R ++ P+L L LL++ F+ Sbjct: 61 LVRGAPVAYLFALLFLLSRLGEDSELKALLALGIRRERVLLPLLGLGALLALLGFLLGES 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + PK + + L + L + L F+ + + + + I R Sbjct: 121 LVPKALAQGQDLLRRQVLERPRALLTPGTTFQDARGRVVYVGEVARDR------IGKLRI 174 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ A+ G + + G + ++ +F+ L Sbjct: 175 LSQEEVVLAEEGRFQ--GGVLQVEKGLRVTYE-GDRPRTLTRFQEGELVLRDLTFEPWQN 231 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 AN L L + +++R + ++F L + A Sbjct: 232 PANRMTLKEL-KEEVERLRKSGVKAGLEATTYYRRYAEPAASLVFALFATGLAFYLL--- 287 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 + +++ ++ + + + PIL + Sbjct: 288 -GGSRSLGLVGVAVLTFFYYATWSVGRIMGEQNALDPILAAW 328 >gi|170692022|ref|ZP_02883186.1| permease YjgP/YjgQ family protein [Burkholderia graminis C4D1M] gi|170143306|gb|EDT11470.1| permease YjgP/YjgQ family protein [Burkholderia graminis C4D1M] Length = 365 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 55/362 (15%), Positives = 120/362 (33%), Gaps = 16/362 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ + +++ + + +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTLVLTTMMIRIVGFAAQGEIDPRDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT +++E+++ ++G S IKP+ A + I + + Sbjct: 62 IMLVATLFVSILFVLTRWYKDSEMVVWLSSGVSLTRFIKPIGMFATPIIILICFFVFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P K + A+ Q S L F + + + + + Sbjct: 122 PWSNQQSKMIRARFQQRDEVSLLAPGQFRESASSHRVFFIEKMSPDQGHVENVFVTSTEN 181 Query: 183 THKIYYA----QSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + + ++L +G + P D IM+F+ Y ++ ES Sbjct: 182 GKVNVVVSKNGHTETHKNGDRFVVLENGRRYEGEPGHPDFRIMEFERYGVKIESQPVVNT 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD-KRA 297 L+ L NP N +EF R L + L++I A Sbjct: 242 PTTTGTPTLTLLRNPTQVNL-----------AEFAWRAGLPLIAINLMLLAIPLAHQNPR 290 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 R + + I L+ S + S+I + IL++ + I + + + Sbjct: 291 RSRTINLVMAVLIYLTYSNLLNVVQSWIEQGKMSFALGLVILHVIVAAIVAFIFWLRVRN 350 Query: 358 YT 359 Sbjct: 351 RP 352 >gi|162149096|ref|YP_001603557.1| hypothetical protein GDI_3326 [Gluconacetobacter diazotrophicus PAl 5] gi|209545161|ref|YP_002277390.1| permease YjgP/YjgQ family protein [Gluconacetobacter diazotrophicus PAl 5] gi|161787673|emb|CAP57269.1| putative membrane protein [Gluconacetobacter diazotrophicus PAl 5] gi|209532838|gb|ACI52775.1| permease YjgP/YjgQ family protein [Gluconacetobacter diazotrophicus PAl 5] Length = 369 Score = 93.9 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 46/360 (12%), Positives = 105/360 (29%), Gaps = 18/360 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTVL 61 + YI R + + L + + + + + V++ ++ +I+ +P + Sbjct: 6 TLSFYIARQFTLAVMAMILSLTGLVSLFDFIDLLRRVATRPDVPTSLASEIALLHVPYFM 65 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF + + R++EL++ G S + L A+L+ I + + + Sbjct: 66 IEILPFGVLLGGIVCFWRLTRSSELIVARAAGISAWQFLTGPLSCALLIGILATGALSPL 125 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFF---------RLDDDLYIKISKYNPNNTLQG 172 + L + L + + + S + L+ Sbjct: 126 SSIMYRQAETLDHVYLRSGGPLNLSDGALWLRQADSGLVPHGVAILHARSVHLQGGVLRI 185 Query: 173 IFIVDSRDTQTHKIYYAQSG-SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 I R T + L R+ I D P + +F Sbjct: 186 GGISLFRLDDTDHLIVRIEAPEGYLGRKVWIFQDA--RTIRPDRLPVPAGRFV-MPTDLT 242 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 + ++ L +R F LT + L++ Sbjct: 243 VPRVQESFASPDTLSVWAL-PGFIALLERSGFSSIRHRLHFQTLLTLPILAGTMALVA-- 299 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 A R+ I ++ F +F S + + ++ P+L + + + L Sbjct: 300 AGFSMRPTRRGGVARMIGSGVAAGFALF-TISKVAAQFGESGAMPPLLAAWAPTGAGLCL 358 >gi|103487658|ref|YP_617219.1| permease YjgP/YjgQ [Sphingopyxis alaskensis RB2256] gi|98977735|gb|ABF53886.1| permease YjgP/YjgQ [Sphingopyxis alaskensis RB2256] Length = 366 Score = 93.9 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 51/361 (14%), Positives = 120/361 (33%), Gaps = 12/361 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTV 60 ++ LY+ R +V I + +L + + + + + G +P + Sbjct: 10 RTMALYVGRLFLFRTFAILFALVLILQTLDLLGESGKILAVPGNGDSDVWRYVGMRMPQI 69 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + PF + T + ++N+N+E++ + G S ++ P+ A+L++ F Sbjct: 70 IETFLPFSVLLGTILTMVTLNQNSEVVAMKAAGMSAHQVLAPLFLAALLVAGISFAFNER 129 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN---PNNTLQGIFIVD 177 I + + + + + + D D I P L+G+ I + Sbjct: 130 IVTRSTAALGAWQKVEYKRVPVDSGVRSNIWVRDGDDLINAETVETSGPAVVLRGVTIYE 189 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A S + R S S + + + Sbjct: 190 RTRGVLSSMLSADSARALPGGGWEM---ANARRFSRRSGTLEPLGTIVAAPNVRPDQFTL 246 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L ++ ++ + +++ L ++ L+ VAA A Sbjct: 247 ADVDGDELPFLKL-KAAIDDLEAAGRPVDALKGVLWHKISGPLSAILMPLLGAVAAFGLA 305 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF-LFCISSIFLLMIKK 356 R K I +++ F F ++ + + Y P L + F + ++ MI Sbjct: 306 --RSGKLFVRAIIGMALGFAYFVADNFAL-AMGDLGAYSPFLAAWGPFILFALIGEMILI 362 Query: 357 K 357 + Sbjct: 363 R 363 >gi|119476402|ref|ZP_01616753.1| hypothetical protein GP2143_08124 [marine gamma proteobacterium HTCC2143] gi|119450266|gb|EAW31501.1| hypothetical protein GP2143_08124 [marine gamma proteobacterium HTCC2143] Length = 353 Score = 93.9 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 52/357 (14%), Positives = 113/357 (31%), Gaps = 5/357 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI I S L+ ++ + + I+ + + S L+ Y +P Sbjct: 1 MNKLGRYISTTITASTLLVLFMLLGLDAIAAIVDEMGYL-SGNYDFVAALRFVIYSVPAT 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + PF + L ++ +EL+++ + G S + ++ V+ I++ I + Sbjct: 60 MFDLLPFAALVGCLAGLGTLASGSELVVMRSAGVSTLRIVWMVMRPIIVVMIAGMLVSEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P S K A A E L+ R + + Sbjct: 120 VAPVTESIAKSERAIALKKSQNIVSREGLWHREANRFMHFNAVQPNGILYGVTMYQFDEQ 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + YAQ +L D + K ++ + + ++L Sbjct: 180 HKPQSTLYAQRAIYQSGE--WLLEDVVESIITDTRVRKIASPSKPWSTELSPELLNILML 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 D +++ + N + YR F K++ Q L + L++I Sbjct: 238 DPIDLSIAG-NDQYANYLQAQGLNSSPYRLAFWKKILQPLSTLALVLLAISFIFGPLREV 296 Query: 301 QRKKIHPIFISLSISF-GVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 I + + I F + P Y ++ + + + ++ L + Sbjct: 297 TMGYRIFIGVLVGIVFRTAQDILAPASLVYGFQPIYASLIPIVICAVLGLWFLRRAR 353 >gi|107023405|ref|YP_621732.1| permease YjgP/YjgQ [Burkholderia cenocepacia AU 1054] gi|105893594|gb|ABF76759.1| permease YjgP/YjgQ [Burkholderia cenocepacia AU 1054] Length = 364 Score = 93.9 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 52/364 (14%), Positives = 123/364 (33%), Gaps = 16/364 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ I +++ + +S +L + G + L Sbjct: 2 IFERSLQRELAYTASAVFMVLLTIMLTTMMIRIVGYAASGEIDPRDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT R++E+++ +G S LIKP+ A + + + + Sbjct: 62 VMLVVTLFVSILFVLTRWYRDSEMVVWLASGVSLTRLIKPIGVFATPIILLITFFAFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P K + A+ Q S L F + + + + + + + Sbjct: 122 PWSNQQSKMIRARFQQRDEISLLAPGQFRESAANHRVFFIEKMSPDQSKVQNVFVTSTEN 181 Query: 183 THKIY----YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + + ++L DG + +P + IM+F+ Y ++ S + + Sbjct: 182 GKVNVVVSQTGHTETSKDGDRFVVLEDGRRYDGTPGQPNFKIMEFERYGVKITSKPVTNV 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD-KRA 297 + L NP +N +EF R L + ++ I + Sbjct: 242 QTTNSTPTPDLLRNPTRDNL-----------AEFAWRAGLPLIAINLMVLGIPLSYQNPR 290 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 R + + I L+ S + + I + L++ + I + + + Sbjct: 291 RSRTINLVMAVLIYLTYSNLLNVVQAQIEQGKMSFGVGLVGLHVVVAAIVAFIFWLRVRN 350 Query: 358 YTKI 361 + Sbjct: 351 RPLL 354 >gi|332524895|ref|ZP_08401082.1| hypothetical protein RBXJA2T_03768 [Rubrivivax benzoatilyticus JA2] gi|332108191|gb|EGJ09415.1| hypothetical protein RBXJA2T_03768 [Rubrivivax benzoatilyticus JA2] Length = 370 Score = 93.9 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 41/370 (11%), Positives = 113/370 (30%), Gaps = 13/370 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M++ + R I S + L + + + I +++++ V + + + + + +P Sbjct: 1 MRTVRRLLYRDIVASVVFVALAFLSLFFFIDLVEKMGNVGRAGRTTGVAVMSALLELPGH 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + T L + +++E I+ G + + L ++ F + Sbjct: 61 FYELMPIAVLIGTIYSLARLAQSSEFTILRTGGLGPGRALSLLAVLGVVFGAITFAVGDY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD------DLYIKISKYNPNNTLQGIF 174 + P + A A + L + Sbjct: 121 VVPVAERKAVAVKALAAGGMRVGRTGAWLKEKRMTPEGERSYSVNLAGTTPDGRLSGIRI 180 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKS----YTLQT 230 D + A++G++ D + ++ + + + T Sbjct: 181 FEFDADGRLSVRIAAKTGTVAADGTWTLSEAEVTRWPDVRLREPAGVVEQRLPELRWAST 240 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 + + + + L + + + + ++Y F K+ L ++ +++ Sbjct: 241 LTPEVVAAAVMPRETMTTADLWRYSVHLSDQAQATQSYEILFWKKALYPLACLVMTALAL 300 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL---YLFLFCIS 347 A A I L ISF + + + + +I L+L Sbjct: 301 PFAYLHARAGSVSLKVFGGIMLGISFVLLNNLAGHVGLLRDWTPWIAAATPSLLYLLMSL 360 Query: 348 SIFLLMIKKK 357 + F +++ + Sbjct: 361 AAFTWLVRYR 370 >gi|187922984|ref|YP_001894626.1| permease YjgP/YjgQ family protein [Burkholderia phytofirmans PsJN] gi|187714178|gb|ACD15402.1| permease YjgP/YjgQ family protein [Burkholderia phytofirmans PsJN] Length = 365 Score = 93.9 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 55/362 (15%), Positives = 123/362 (33%), Gaps = 16/362 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ + +++ + +S +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTLVLTTMMIRIVGFAASGEIDPRDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT +++E+++ ++G S IKP+ A + I + + Sbjct: 62 IMLVATLFVSILFVLTRWYKDSEMVVWLSSGVSLTQFIKPIGIFATPIIILIMFFVFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P K + A+ Q S L F + + + + + + Sbjct: 122 PWSNQQSKLIRARFQQRDEVSLLAPGQFRESATSHRVFFIEKMSADQARVENVFVTSTEN 181 Query: 183 THKIY----YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + + ++L +G + P D IM+F+ Y ++ +S Sbjct: 182 GKVNVVVSKTGHTETRKNGDRFVVLENGRRYDGQPGQPDFRIMEFERYGVKIQSQPVVNT 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD-KRA 297 L+ L NP +N +EF R L + L++I A Sbjct: 242 PSTTGTPTLTLLRNPTNDNL-----------AEFAWRAGLPLIAINLMLLAIPLAHQNPR 290 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 R + + I L+ S + S+I P + L++ + I + + + Sbjct: 291 RSRTINLVMAVLIYLTYSNLLNVVQSWIEQGKMSFPVGLVGLHVIVAAIVAFIFWLRVRN 350 Query: 358 YT 359 Sbjct: 351 RP 352 >gi|149186433|ref|ZP_01864746.1| predicted permease [Erythrobacter sp. SD-21] gi|148830022|gb|EDL48460.1| predicted permease [Erythrobacter sp. SD-21] Length = 409 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 54/361 (14%), Positives = 124/361 (34%), Gaps = 11/361 (3%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI R + + + + + ++L+ ++ V+ + ++ K+ L+P + Sbjct: 8 IDRYIARLVIVPMVGVFVLAASLLVLDKMLRLLDFVAVEGGPVGVVFKMLATLLPEYASL 67 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + + +EL + G S L++ + +L I+P Sbjct: 68 AIPLGLLLGILLAFRKLATTSELDVFRAVGMSYGRLLRVPFLITGVLMTLNVALVFFIQP 127 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSRDTQ 182 R T ++L + + + ++ F L D + ++I + + L+GIF + D Sbjct: 128 VSRFTYERLEYELRSGALGASIKVGEFTTLADRMALRIEESEDDGRQLKGIFARVANDKG 187 Query: 183 THKIYYAQSGSI---DLDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSST- 237 A+ G+ D IIL E S+ ++ F + L + Sbjct: 188 QVLSISAKEGNFLATTDDPDTIILRLTEGTIVQDTGSQTPRVLTFTRHDLPIDLPAIEEF 247 Query: 238 --IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + L LL + N + ++ F+ RL + + + L+++ Sbjct: 248 RARGEDEREYILPELLRIGWAD-NQTESKRDASQASFNFRLVEVVMMALMPLLAVALGIP 306 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + I + V + +P L++ F +++ L M Sbjct: 307 PKRSTSALGVFLSIIMVVAYHKVNQYGEDLAAIGMFDPILA--LWVPFFLFAALILWMYY 364 Query: 356 K 356 + Sbjct: 365 R 365 >gi|254294287|ref|YP_003060310.1| permease YjgP/YjgQ family protein [Hirschia baltica ATCC 49814] gi|254042818|gb|ACT59613.1| permease YjgP/YjgQ family protein [Hirschia baltica ATCC 49814] Length = 368 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 45/343 (13%), Positives = 99/343 (28%), Gaps = 19/343 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTV 60 + YI LM+ I+ ++ +++++ V + SL +++ P + Sbjct: 4 SRIQTYIFWECVAGLLMTLGIILGAILLVDMVEQLRTVGARTELSLLGAFQLTALKAPQL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + PF + + + +NR++EL I +G S + P FLA L + Sbjct: 64 ILETMPFAILVGSMLAYSKLNRSSELSAIRASGVSAWRFLAPTFFLAAFLGCIAMTIIDP 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT----------L 170 + + + ++ ++ + Sbjct: 124 LATFSNAKYETEKTLLLDDTGAVKDSAKRQKKVWLRQGTDTTQSVIHGEVLPNDNSSLQN 183 Query: 171 QGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT 230 IFI++ + + L L + +K L T Sbjct: 184 VEIFILEKDGDEFEFQRRIDAKKATLRPGFWQLEGVTEYSSDNE-----PIKQDYLALTT 238 Query: 231 ESANSSTIVLKANDQNLSFLLNPN-PNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 S+ + +++++SF P + + Y + H L + LI Sbjct: 239 TLDPSTILDRGTDEKSISFWKLPQLIQDARRAGLDADKYILKLHTLLAMPVLLGAMALIG 298 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN 332 V L R + + F +F+ Sbjct: 299 AVVCL--RLRRSGGVTQLLAAGIGAGFLLFFVNQVSKGLASSG 339 >gi|150395988|ref|YP_001326455.1| permease YjgP/YjgQ family protein [Sinorhizobium medicae WSM419] gi|150027503|gb|ABR59620.1| permease YjgP/YjgQ family protein [Sinorhizobium medicae WSM419] Length = 360 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 51/353 (14%), Positives = 112/353 (31%), Gaps = 10/353 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTV 60 + Y + R+ + I + ++I + + +S+ +++ L ++ + IPT+ Sbjct: 4 NTLGRYFFKRYARTTFWFLIGIFALIFIIDFSELTSRMSNLPHYTVSGALLMTTFRIPTI 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L PF L S+NR EL++ G S ++P + A++ + N Sbjct: 64 LQQTVPFVALFAAMAALISLNRRYELVVTRAAGISVWQFLRPFVVGALIFGALAVVVINP 123 Query: 121 IEPKCRSTIK--QLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 + + + + + + + D I T V Sbjct: 124 LAAWGTKKAEALEAEWGSTRSAAANSIPWLRQIYDGTDTIIGARSVQNGGTELINVTVIH 183 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 D Q + S L+ +LN + M+ Sbjct: 184 FDPQGAITLRQDAKSAKLEDGYWLLNGVVETEV---GRLPRRMETAQLRTNLRPDFVQER 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + KA+ L ++FH ++ L V LI+ + K + Sbjct: 241 LAKADSIQFFDLPRK-IEVARSFGFSTNGLETQFHSLMSLPLLLVAMTLIAACVSLKFSR 299 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 Q + + + +S V + + +I + P + +L + ++ L Sbjct: 300 FNQSR---SVILGGILSGFVLYVVTVLIKAFGSSGIVPPFVAAWLPVVVAMAL 349 >gi|37528301|ref|NP_931646.1| hypothetical protein plu4480 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36787739|emb|CAE16852.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 366 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 54/364 (14%), Positives = 138/364 (37%), Gaps = 19/364 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQVAILFILLLIFFCQRLVEILGAAVEGNVPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + + +E+ ++ G + L+ L LA+L S ++ + Sbjct: 62 LILPLSLFLGVLMTFSKLYTESEITVMHACGLGKRVLVVSALILALLTSALAAVNVIWVM 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +Q+ A A+ + + + E F +D + N + +F+ R Sbjct: 122 PWSSKYQEQVVADAKANPSLAAIMEGRFKPSEDGNLVLYIGNVHGNKFENVFLAQLRPVD 181 Query: 183 T--HKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + G + +Q ++LN G + + + +D I +F+ Y S Sbjct: 182 NQRPSVVISNGGHMVERPDGKQVVVLNHGTRYEGTAMLRDFRITEFRDYQAIIGHQTSIV 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 K +++ L N + R+EFH RLT L +I ++ Sbjct: 242 DNNKVEQKSIIQLWQDNDKDS----------RAEFHWRLTLVLSVLIMAMM---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ ++ + ++ + F S + P+++++L + + L ++ Sbjct: 289 VNPRQGRVLSMLPAMLLYLIFFLLQSSLRSN-GSKGKLDPMIWMWLTNGTYLMLALVLNI 347 Query: 358 YTKI 361 + + Sbjct: 348 WDTL 351 >gi|213583965|ref|ZP_03365791.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 342 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 42/342 (12%), Positives = 107/342 (31%), Gaps = 2/342 (0%) Query: 16 FLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTN 75 +M+ +V ++ +I+ + ++ + +P + + P + Sbjct: 1 IMMTLFMLVSLSGIIKFVDQLKKAGQGNYDALGAGMYTLLSVPKDIQIFFPMAALLGALL 60 Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAK 135 L + + +EL+++ +G +R+ + V+ AI L + + P+ + A+ Sbjct: 61 GLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAPQGEQMARNYRAQ 120 Query: 136 AQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSID 195 A + ++ L+ + ++ + + + YA S D Sbjct: 121 AMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELAGISIYAFNDQRRLQSVRYAASAKFD 180 Query: 196 LDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPN 254 + + L+ + +P S ++ + L + ++S L N Sbjct: 181 PEHKVWRLSQVDESDLQNPKQITGSQTVSGTWKTNLTPDKLGVVALDPDALSISGLHN-Y 239 Query: 255 PNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSI 314 + Y+ ++ Q L + L+++ IS Sbjct: 240 VKYLKSSGQDAGRYQFNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPMGVRVVTGISFGF 299 Query: 315 SFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 F V + + P + L LM++K Sbjct: 300 VFYVLDQIFGPLTLVYGIPPIVGALLPSASFFLISLWLMLRK 341 >gi|332704120|ref|ZP_08424208.1| permease YjgP/YjgQ family protein [Desulfovibrio africanus str. Walvis Bay] gi|332554269|gb|EGJ51313.1| permease YjgP/YjgQ family protein [Desulfovibrio africanus str. Walvis Bay] Length = 360 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 53/362 (14%), Positives = 119/362 (32%), Gaps = 8/362 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+LR + + + + + +R++ + L I+L IP + Sbjct: 1 MSVLSRYLLRQNLYLMSICLCLGIAVYLLSDLFERLDDFLEAGRGLKIMLVYFLVKIPLI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P F + L++M N ELL + G S +I L ++ S Sbjct: 61 ISQILPAVFLVAMLVQLSAMRSNRELLALRAGGISYKAIISFFLVYSLFWSGGQLFISQY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 + K K++ A+ + + + +D+ + I P + + + I Sbjct: 121 LGVKGLEYSKRIWAEDVRGKEYVTKTIHKLWLREDNDILHIDTVQPASGKGRNLSIYTLA 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + + + + + +LND + + + S +S + Sbjct: 181 QDRRSVVQFINAKTFEAKEGNWVLNDVIIIDPIRFTSEYKPTLKLSLGEAFKSFTLAESR 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 L L + +E R+ +H +L+ I L+++ Sbjct: 241 NNPAQLPLWELGRA-IHQLEVTGSNVEGLRTIWHGKLSYAFSITIMALLALAIITF---- 295 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYT 359 + + L +F +F+GF + + + PI +L I + + Sbjct: 296 -EHNVYLNLTAGLVATF-LFYGFFVLGSSAGEMGFLPPIAGAWLGNAVFILGATTRLFWR 353 Query: 360 KI 361 I Sbjct: 354 SI 355 >gi|325292486|ref|YP_004278350.1| permease protein [Agrobacterium sp. H13-3] gi|325060339|gb|ADY64030.1| putative permease protein [Agrobacterium sp. H13-3] Length = 362 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 49/354 (13%), Positives = 110/354 (31%), Gaps = 10/354 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTV 60 + Y L+ + + L + I ++ + +SS S+ L ++ +P + Sbjct: 4 STLARYFLKRYLITAIWFLLGVSAIIYLADFSETARRMSSVPGYSVPGALGLTALRLPLI 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L PF L S+NR EL++ G S I P + A+ L I + N Sbjct: 64 LQQTIPFIALFVGMTTLISLNRRYELVVTRAAGVSAWQFILPFVLGAVFLGILSVLVLNP 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLE---ENLFFRLDDDLYIKISKYNPNNTLQGIFIVD 177 I ++ + A + + + + I +K +N + +V Sbjct: 124 IAAWGQNRSLSMEAGWRNEGSGGRQQDIIPWMRQSSGGQDTIIGAKSFEDNGTMLLDVVL 183 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + I Q L +G + + + Sbjct: 184 IHLDKDGNIVSRQDAKSAKLEDGYWLLNGVAE--TRAGHVPVRQESTRISTNLRREFVQE 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + L + ++ + +++H L+ L V LI+ + Sbjct: 242 RMTQTETVAFFDLSHKIEVAKSF-GLSSKALETQYHFLLSTPLLLVAMTLIAATVSL--K 298 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 R + I + F ++ + ++ P + +++ I ++ L Sbjct: 299 FSRFAQSRSVILGGIVSGFVLYVV-TVLVRAFGSGGVVPPTVAVWVPVIVALAL 351 >gi|187736000|ref|YP_001878112.1| permease YjgP/YjgQ family protein [Akkermansia muciniphila ATCC BAA-835] gi|187426052|gb|ACD05331.1| permease YjgP/YjgQ family protein [Akkermansia muciniphila ATCC BAA-835] Length = 396 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 41/372 (11%), Positives = 108/372 (29%), Gaps = 17/372 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y+ R +F+M + I + + + + L + +P +L Sbjct: 8 SILDKYVARTWFTAFIMCTAILTLIYIIGDFADNVGDLMNLDAPLMGTFRFYLSQLPMIL 67 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 ++ P+ + T LT ++ ++E+ + +G S + + P++ A+ SI+ I Sbjct: 68 NLILPYTLLLGTLWALTKLSSSSEITGMLQSGRSLLRINTPIIIGAVFASIYFGIFGFHW 127 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI-----V 176 P K + + + ++ + + ++ F Sbjct: 128 APNSALYRKLMFSSLSQNKNNHASQSTIYKNDAESRIWYLGNPPGIDSPGNPFRQVRVEQ 187 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDI---------SIMKFKSYT 227 S + +A + D + S + Sbjct: 188 FSAPGKMKYELFADEATWDPASRTWTFRQAIKRNYSQEEPRQLHDVPVFAGQEYQTLKEH 247 Query: 228 LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGL 287 + ++ + Q L + L + ++E+H R+ + +I Sbjct: 248 YPETPWQLISPNVRVDTQGTPAL-QELIKSGTTNARYLRSLQTEWHVRIARIFSCIILTF 306 Query: 288 ISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCIS 347 I+I +A R+ + +F + ++ + Sbjct: 307 IAIPSAIT--FQRRSAMSGIGIALFLAAAMLFLYEFFPTLASAGYLPTWLGAWMPNIIYT 364 Query: 348 SIFLLMIKKKYT 359 I + + + K Sbjct: 365 IIAIRLFQTKLA 376 >gi|188532528|ref|YP_001906325.1| Putative permease [Erwinia tasmaniensis Et1/99] gi|188027570|emb|CAO95417.1| Putative permease [Erwinia tasmaniensis Et1/99] Length = 366 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 48/361 (13%), Positives = 128/361 (35%), Gaps = 19/361 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGEIPTNLVLTLLGLGVPQMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G + L+K + L + ++ ++ + Sbjct: 62 LILPLSLFLAILMTLGRLYAESEITVMHACGLGKSVLVKAAMILMLFTALLAAVNVGWLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+ + L F + D + + +T +F+ R Sbjct: 122 PWSSRYQNEVLQNAKANPGAAALAAGQFQQSGDGQSVLFIENVKGDTFSNVFLAQLRPKG 181 Query: 183 T--HKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + ++ G + Q + L+ G + + +D I FK+Y + Sbjct: 182 NARPSVVVSEHGHMEQRRDGSQVVTLDQGTRFEGTALLRDFRITDFKNYQAIVGHQVVTL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + +L L + + + +RSE H RLT +I L+ Sbjct: 242 DPNDSEQMSLDTLWHSDKPD----------FRSELHWRLTLVFSVLIMALM---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ ++ + ++ + F S + P + ++ + + L ++ Sbjct: 289 VNPRQGRVLSMLPAMLLYLVFFLLQSSLRSS-GDKGRVDPAIAMWTVNVVYLALAVLLNA 347 Query: 358 Y 358 + Sbjct: 348 W 348 >gi|297170682|gb|ADI21706.1| hypothetical protein [uncultured Verrucomicrobiales bacterium HF0130_14P10] Length = 392 Score = 93.5 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 42/396 (10%), Positives = 105/396 (26%), Gaps = 44/396 (11%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + + YIL + F +S + + + + + +L+P+ Sbjct: 1 MSTLDRYILAEWLKVFGVSLIVLTGLLVLQDAADHAEDFRQGFAGAGEVATYYAWLVPSY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP + P + T V+ ++ RN E+ ++ G + + L + +L A+LLS + Sbjct: 61 LPWLLPIALFVSTLFVVATLRRNNEIAVLRACGVNVLRLSRSLLVTALLLSALSYGLNAK 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQ--GIFIVDS 178 P + L + N + T G+ + Sbjct: 121 WSPLAMEKSQGLLEVLRGKSDHRNFVSNFDMSPPKTNRRWFFRKFFAVTSSGAGVHLYSR 180 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRK----------SPISKDISIMKFKSY-- 226 + + +G + +F Sbjct: 181 TTGGRDSFRIRAEKAFRDEDGCWRFLNGRFIGFAGPRGLPVPSESGEGLVWEAEFAEQDS 240 Query: 227 ---------------------TLQTESANSSTIVLKANDQNLSFLLNP-NPNNPNYRPEL 264 ++ + + K ++ ++ L + + Sbjct: 241 SSDGFSSVPILNKQFSSLRLPDVREDPEPFLLMRKKPSELSVRELKTIVDASEVTEGNAA 300 Query: 265 LETYRSEF-HKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFS 323 + Y H ++ + I A R + +L + G + + Sbjct: 301 VRPYAIRMGHAFWASP-GCLLAVALGIPFALVGN---GRSAAAGVARALGLCVGYYVART 356 Query: 324 Y---IIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + + + L I +++ L + Sbjct: 357 MGDSLGEAGIIPIEWAAGVPVLLLGIVAVWFLWRVR 392 >gi|217977121|ref|YP_002361268.1| permease YjgP/YjgQ family protein [Methylocella silvestris BL2] gi|217502497|gb|ACK49906.1| permease YjgP/YjgQ family protein [Methylocella silvestris BL2] Length = 380 Score = 93.5 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 55/367 (14%), Positives = 121/367 (32%), Gaps = 12/367 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + LY+ + IG + L+ + + + Q + + L L +PTVL Sbjct: 3 RLLTLYLAKRIGVTALLIEAMLCIPLVMTSLFQTLPAAAIRGGLLWPAL---LGTLPTVL 59 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + + M+ + + ++ + S +L P L +A + + I Sbjct: 60 YLALPLSVGVAVALEFSRMSSDGMIAVLYSIRLSVWSLCLPALIVAAAAVGAGYALSSYI 119 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEE-NLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR- 179 P + + + +L LE + + + ++ + G+FI Sbjct: 120 APSYVGQMHDVIHVIRNSLNHRMLEPAHFYTFDKGARTMFFQRWRSADVAAGMFIYQYSA 179 Query: 180 DTQTHKIYYAQSGSIDLDRQA--IILNDGEVHRKSPISKDISIMKFKSYTLQTESAN--- 234 + +I A+ + Q I+LN G + ++ + F+ Y L + Sbjct: 180 EKNEEQIINAEEAEFRRNEQGVVIVLNHGSIQTLPSGAQAMRNANFEQYALPIDMQGAGA 239 Query: 235 -SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + L P + P + SE KR + + L+++ Sbjct: 240 LPKRDWRGVFELPLGDFFAAIPPE-RWDPRGYAEWMSEAAKRCFIPILALTHALLAVGLV 298 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 A R L+I + +NP+ I ++ L + + L + Sbjct: 299 LTVAAATGRGSAATTSTVLAIPLIHVAILVGSESIVRENPHLIWLIALAIAAELGLALFL 358 Query: 354 IKKKYTK 360 I ++ + Sbjct: 359 IARRNAR 365 >gi|298291095|ref|YP_003693034.1| permease YjgP/YjgQ family protein [Starkeya novella DSM 506] gi|296927606|gb|ADH88415.1| permease YjgP/YjgQ family protein [Starkeya novella DSM 506] Length = 361 Score = 93.5 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 49/359 (13%), Positives = 109/359 (30%), Gaps = 14/359 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 ++ +Y R + L + + +I +L+ V L+ + Y +P Sbjct: 4 RTLGVYFGRRFLGAVLGIFVGCAGLIMLIDLLELSRRVGERDVDFGTLMLLVVYRMPFFT 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF +++R EL++ G S I P LA+LL +F N + Sbjct: 64 EQLLPFAVLFGAIGTFLTLSRRLELVVARAAGISAWQFIAPACLLALLLGVFSTTVYNPV 123 Query: 122 EPKCRSTIKQLSAKAQLA------LTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI 175 + +L A+ +T + + + L G+ + Sbjct: 124 SADFKDRASRLEAEIFNRQTGLFAMTTGGFWMRQQSVDGQAIIQAAATSDGGRQLTGVNV 183 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 +I + ++ I + ++ +Y L T + Sbjct: 184 FLFGADDKLTERIEAVRAILEPGAWRL------EHARVLTPGIGLQEYDAYMLATNLTPN 237 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 +D + L + E YR ++ L + + + LI+ + Sbjct: 238 QVQETLQSDTVPFWQLPAAIDAATRVGFGAERYRLQYQSLLARPMLLLAMVLIAASVSL- 296 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + R I ++ F ++ E + I F + ++ ++I Sbjct: 297 -RVFRFGGIGQTILGGVAAGFLLYVSTKLAEDLGEAGIVHPVIAAWFPAVVGALMGILI 354 >gi|194290553|ref|YP_002006460.1| permease, yjgp/yjgq family [Cupriavidus taiwanensis LMG 19424] gi|193224388|emb|CAQ70399.1| putative permease, YjgP/YjgQ family [Cupriavidus taiwanensis LMG 19424] Length = 392 Score = 93.5 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 48/392 (12%), Positives = 125/392 (31%), Gaps = 38/392 (9%) Query: 1 MKSF---ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLI 57 M+ E Y R + F ++ + +L + V ++ + + L Sbjct: 1 MRILRVYERYFGRLVYGVFAFILFAVLSLFVFFDMLNELENV-NAQYTSLVALFHVLLQA 59 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 PT + V P + V + + +E I G + + + LA+ L++ FI Sbjct: 60 PTRVYEVLPIAVLISAIYVFSQLASQSEYTIFRVAGLNTRQALFSLFKLAVPLALVTFIF 119 Query: 118 ENIIEPKCRSTIKQLSAKA---------QLALTFSYLEENLFFRLDDDLYIKISKYNPNN 168 I P+ +++ +A + + +++ + ++ ++ P+ Sbjct: 120 GEFIGPRAEQYAQKVKLEAIGATVSSGFRSGVWVKDRDKDPAGDGEITRFVNVAGLRPDQ 179 Query: 169 TLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSP--------------- 213 T+ GI + + ++ Q+ L + R Sbjct: 180 TITGITMYEFDPQYRLRVIRVAQEGRYQGGQSWELQNVSETRFVELAPHAQGAQPAAATP 239 Query: 214 ------ISKDISIMKFKSYTLQTE-SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLE 266 +KF + +E + +++L ++ + L + + + Sbjct: 240 PRDALAPDFRAEQVKFPRVAMHSELTPQILSVLLVTPERMSTLDLFRYIRHLRDNKQDTQ 299 Query: 267 TYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYII 326 Y F K++ L + +++ A A I L +SF + + Sbjct: 300 RYEIAFWKKVIYPLTLFVMVALALPFAYLHARAGAVGVKVFGGIMLGLSFHLSNTLFSHV 359 Query: 327 HKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + + PI+ + + + ++ ++ Sbjct: 360 GLLH---TWPPIISALVPGTLYLMVALLALRW 388 >gi|182677588|ref|YP_001831734.1| permease-like protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182633471|gb|ACB94245.1| permease-like protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 386 Score = 93.5 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 44/364 (12%), Positives = 116/364 (31%), Gaps = 12/364 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + LY+ R I S LM + + + + + ++ +PTVL Sbjct: 3 RLLTLYLTRRIALSVLMIEASLCLPLVMTSLFSALPPAAVRG---GLIWPALLGTLPTVL 59 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + M + ++ + S ++ P + +A++ F + + + Sbjct: 60 YIALPMAVGIAIALEFYRMASEGMIAVLYSLRLSVWSICLPGIVIAMVCVFFGYFVASFV 119 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEE-NLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + + + +L LE + + + + ++ ++ + G+FI D Sbjct: 120 APNYVGQMHDVVHVIRNSLNHRMLEPAHFYTFDNGSKTLYFQRWRSSDVVSGMFIHQFSD 179 Query: 181 TQTHKIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA---- 233 + + S + + ++L+DG + + + I F Y + + Sbjct: 180 EKKEEEIITASIAEFRRNENGVMLVLSDGSIESRPEGATAIHTAHFDEYVIPIDMQGTGG 239 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + P + P + SE KR + ++++ Sbjct: 240 MPKRNWRGVFEVPALEFFRERPQQAD-DPRRFSEWTSEATKRFAVPFLALSHTILAMGLV 298 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 A R + + + + Q+P + ++ L + + + Sbjct: 299 LTLANATGRSTKAGLTAFIVVPLAHILILIGAETLVRQDPRLVWLVGLAIAAELGVGCYL 358 Query: 354 IKKK 357 + +K Sbjct: 359 LYRK 362 >gi|119513620|ref|ZP_01632629.1| permease YjgP/YjgQ [Nodularia spumigena CCY9414] gi|119461725|gb|EAW42753.1| permease YjgP/YjgQ [Nodularia spumigena CCY9414] Length = 385 Score = 93.5 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 47/378 (12%), Positives = 120/378 (31%), Gaps = 22/378 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQI-LQRINLVSSSTESLNILLKISGYLIPT 59 + E Y++ + L S + +A I I ++ + + IL+ + +P Sbjct: 10 LSLLERYLISELIPPLLFSIAIVTIVAESIGISFEQFKFLIERQLTFEILIYLHLLKLPE 69 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + P + T ++ +E++ I + G S L+ P + +A LL LFI Sbjct: 70 FIVFAAPIAVLLATIFTYKKLSNTSEIIAIHSCGVSLDKLVYPAVMVAALLIPVLFIFNE 129 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-------------YIKISKYNP 166 +I KA + + ++F++ D+ ++ ++ Sbjct: 130 VIVIPANYKAAITLEKAMNINRLYFQKNDIFYQQIDNENTLDSLAQQNYLKHLLYAERFA 189 Query: 167 NNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSY 226 + +Q + ++ + I ++ ++ +G + + +KF + Sbjct: 190 DGQMQQVTLLMRDSEKLKVIIKSRFAECYGQQKFCYFYEGVKNIINADGSYGERIKFDTM 249 Query: 227 TLQTES----ANSSTIVLKANDQNLSFLL-NPNPNNPNYRPELLETYRSEFHKRLTQWLF 281 L + L + N+ + + + +R T + Sbjct: 250 PLYLPNIALQLQIDQETLDNREMNIFQVYQRLLVFQKAGDRRNFRSLQVNIQERFTLPVS 309 Query: 282 PVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL 341 +F L+ + ++L I I ++L Sbjct: 310 CAVFALLGSAIGINLQPRTRYNSFS---LTLGIILLYDAIQVIAKIFIISEIISFSWIWL 366 Query: 342 FLFCISSIFLLMIKKKYT 359 +++ + ++ KK + Sbjct: 367 PNIVGTTVGVYLLIKKNS 384 >gi|221066429|ref|ZP_03542534.1| permease YjgP/YjgQ family protein [Comamonas testosteroni KF-1] gi|220711452|gb|EED66820.1| permease YjgP/YjgQ family protein [Comamonas testosteroni KF-1] Length = 369 Score = 93.5 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 51/365 (13%), Positives = 129/365 (35%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ I + + RSF + + ++ + + +++ + + S + ++ + G+ + LP Sbjct: 2 LFDSSIRKELARSFGATAVVLITVVMTMMLIRTLGQAYKGSVSPSDVMLVMGFTVLGQLP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + + L+ M R++E++I G +L+KP+L A + + + + Sbjct: 62 TILGLSLFVAIVGSLSRMYRDSEMVIWFAAGQGLASLLKPLLRFAWPVILITAVLALGVL 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P I+Q+ + Q + F + + + + + Sbjct: 122 PWSYQQIEQIKTQFQQRSDLDRIAPGEFQESAGGTRVFFVDKDSPSDMAASNVFVVSRDP 181 Query: 183 THKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + G+ + ++ +IL DG+ + I +FK Y +Q ++ N I Sbjct: 182 GKESVTSAKGAHLAVIKGQRMVILEDGQRMETRSDDGSVRITEFKEYGVQVDNDNPVAIE 241 Query: 240 LK-ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 A L+ RS RL + F ++ + ++ Sbjct: 242 EMAARSMPTKDLI----------GMDEPIARSVLAWRLGLPFAALNFVILGLAI---SSV 288 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY----YIPILYLFLFCISSIFLLMI 354 + + I+L + + + N + +L+ + +S + LL Sbjct: 289 NPRAGNSSSLMIALFAFIVYYNLMTLGESWVSANKIGMWGILGLLHGSILTVSVLVLLAR 348 Query: 355 KKKYT 359 +++ Sbjct: 349 HFRWS 353 >gi|329890121|ref|ZP_08268464.1| hypothetical protein BDIM_18180 [Brevundimonas diminuta ATCC 11568] gi|328845422|gb|EGF94986.1| hypothetical protein BDIM_18180 [Brevundimonas diminuta ATCC 11568] Length = 342 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 50/324 (15%), Positives = 121/324 (37%), Gaps = 6/324 (1%) Query: 36 INLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTS 95 + ++ +S+ +++K++ +P ++ ++ P + LT + R EL G S Sbjct: 1 MEVIVERGQSVWVMVKLTLLALPQLIAVILPIGLFVGALIALTRLQREQELTAAYAAGVS 60 Query: 96 RITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD 155 R LI+P L +A+++++ + ++P + ++ + + L +EE F + D Sbjct: 61 RWALIRPALQIALIVTVISLLVNVFVQPWAQREGRRQAFAIRTDLAALLVEEGRFVQGPD 120 Query: 156 DLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDR-QAIILNDGEVHRKSPI 214 L + + + N ++ +F+ + +D + + +G + R S Sbjct: 121 GLTVYVQQIEQNGLMKNLFVYLDNGKTVTTWDAETARFGRVDGLPVLTMQNGSMQRYS-S 179 Query: 215 SKDISIMKFKSYTLQTES--ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEF 272 + ++ + F S I K +D L+ L +P P +E Sbjct: 180 REVLNQLSFDQQVFDLSPYAKTSERIRFKPSDLWLTDLFDPTPALLETAG-TRGELAAEG 238 Query: 273 HKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN 332 H RL L+ + ++ A A R + + + ++ N Sbjct: 239 HSRLASPLYALAAMAFALAAILGGAFSRSGYAGRIARAAGAFLV-LRVIGYGLVAGSAWN 297 Query: 333 PYYIPILYLFLFCISSIFLLMIKK 356 + Y+ + + L ++ + Sbjct: 298 GALNVLQYVVPLAATFLALRILFR 321 >gi|262038164|ref|ZP_06011561.1| permease, YjgP/YjgQ family [Leptotrichia goodfellowii F0264] gi|261747812|gb|EEY35254.1| permease, YjgP/YjgQ family [Leptotrichia goodfellowii F0264] Length = 358 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 50/356 (14%), Positives = 117/356 (32%), Gaps = 13/356 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI+ +SF + + I + + + + +L +K Y IP + Sbjct: 1 MNKLDKYIILNYIKSFFLGMMMFFLIFILAESINLTGWIMDGKFTLGEAVKYLSYGIPEI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + ++ M + E+ + G S + + K L + +S+ + Sbjct: 61 VTNTAPLGILLGSLLAISKMAKQLEITAMKTGGISFLRIAKFPLIFSFFVSLSVLYVNVD 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD----LYIKISKYNPNNTLQGIFIV 176 I K S + +E+N D ++K + I + Sbjct: 121 ILGKSNSKKSNMKLLKLEQAEPVKVEKNFILVKIDKNRILYSGYVNKKDGIMREVEIIEM 180 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 +Y A G+++ + + H + + + L+ + Sbjct: 181 ADEFKNVKTVYTASEGALEKGTDNWTFTNLKEHNIM--TNVSKNIDPGVFKLKIPIDDIL 238 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 +KA + + L + ++ +F+ R++ L + I + Sbjct: 239 ADPVKAKNLTMPELREKIVYFTRVGADSID-LLIDFYYRISFALASFVMCFIGLSLG--- 294 Query: 297 ALVRQRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 R + + I LS+ G ++GFS I+ + + FL + + + Sbjct: 295 --SRYVRGGAAVNIGLSVIIGYSYYGFSTIMKSLASTGTIPVYIACFLPLLIYLGV 348 >gi|71908694|ref|YP_286281.1| permease YjgP/YjgQ [Dechloromonas aromatica RCB] gi|71848315|gb|AAZ47811.1| permease YjgP/YjgQ [Dechloromonas aromatica RCB] Length = 360 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 38/360 (10%), Positives = 118/360 (32%), Gaps = 19/360 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE R ++ + ++ I +++ + + + + + G+ +P Sbjct: 2 IFERAARREFAQAAAGISVALLAILTSTNLIRLLKEAAGGRIAPEAVASLLGFSALNFMP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + L+ + R++E+++ ++G + PVL A + I + + + Sbjct: 62 VLLSLTLFVSVLLSLSRVYRDSEMVVWFSSGLPLTGWVSPVLRFAAPIVIAIAVVSGFLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P S+ + K S + F + + + + + + + Sbjct: 122 PWANSSSAEYREKLSARSELSQVSPGAFREVKKGQRVFFVEGVEGDGSHVGNVFVASYQE 181 Query: 183 THKIYYAQSGSID----LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + ++L G + P + +M+F+ Y + E S Sbjct: 182 GKLGVIMSDSGYQEASGNGDRFVVLEHGRRYEVEPGTPAFKVMEFERYRARVEDGEPSPS 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + ++ L+ + R E R+ + ++ L++I + Sbjct: 242 DVSPKGMPITRLVLED----------SNPARGELLWRVGLPVSALVLCLLAIPL---SYV 288 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMIKK 356 + + + I++ + S + + +++ + + + + LL ++ Sbjct: 289 NPRAGRSANMLIAILVYAIYNNLLSVSQAWVAQGKMSFWVGLWAAHVLMLLPLVLLFYRR 348 >gi|297182283|gb|ADI18452.1| predicted permeases [uncultured Oceanospirillales bacterium HF4000_13G19] Length = 354 Score = 93.1 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 44/360 (12%), Positives = 125/360 (34%), Gaps = 28/360 (7%) Query: 14 RSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMET 73 + ++ +V + + ++ + ++ + + L + + +P L M+ P + Sbjct: 1 MTTVLVTFILVMVLVSGRFIKYLAEAAAGQIAADALFLVMAFRLPEFLQMILPLSLYIAI 60 Query: 74 TNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLS 133 VL M+ + E++++ G +++ ++ A++ + + + P+ + + ++ Sbjct: 61 LLVLGRMHMDNEMVVLRAGGQGDGRVVRSLIVPALVAMSVIALFALYVTPQGDAEVNRIF 120 Query: 134 AKAQLALTFSYLEENLFFRLDDDLYIKI--------SKYNPNNTLQGIFIVDSRDTQTHK 185 + + L F DD + + N S + Sbjct: 121 EEQKGRSVLELLTPGRFHVKGDDDNQRATYAESLNREEGVLENVFVADASFSSEEAGRLL 180 Query: 186 IYYAQSGSIDLDRQAIILN--DGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 +A+SG++ L DG ++ P D + F+ ++ S SS+ + Sbjct: 181 TVWARSGNLVQQDGISYLELTDGYQYQGKPGEADYREVAFEKARVRIGSERSSSRPPEVR 240 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 ++ L++ + +E R + L I L A + ++ Sbjct: 241 GRSTLDLID----------DGGNQAMAELAWRWSLVLTVPIMCL---AAVPLSRVNPRQG 287 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQN-----PYYIPILYLFLFCISSIFLLMIKKKY 358 + + ++ + I + P+Y ++++ L ++F+L + Sbjct: 288 RFLRMIPAVLGYMLYVGLLLTMRSWIAEVPGSERPWYYSMVWIHLIAGFAVFMLYFGGRL 347 >gi|325295268|ref|YP_004281782.1| permease YjgP/YjgQ family protein [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065716|gb|ADY73723.1| permease YjgP/YjgQ family protein [Desulfurobacterium thermolithotrophum DSM 11699] Length = 361 Score = 93.1 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 68/355 (19%), Positives = 125/355 (35%), Gaps = 15/355 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K YI I R F+++ +F+ + + V S+ L + IP L Sbjct: 4 KIIHRYIFLEILRVFILTLGLFIFVILMDRASSIAETVFGQGVSILNFLSVLVKGIPAFL 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P F + V + N EL+ + + G S L KPV+FL + SI F S + Sbjct: 64 GMTIPMAFILSVLIVFIQLGNNNELVALKSCGVSTKELSKPVIFLGVAFSILSFYSLMFL 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 PK +K+ + + F + + K P F+V Sbjct: 124 MPKSNVAMKKEIEELVKKKITMSISPKNFSSNFPGVTFYVEKLYPEKGYLENFMVSLVKK 183 Query: 182 QTHKIYYAQSGSIDLDRQAIIL--NDGEVHRKSPIS-KDISIMKFKSYTLQTESANSSTI 238 +A+ G + ++ + L DG + ++ ++ FK+YT++ Sbjct: 184 DELITIFAKKGMLRTEKDTVFLDIQDGTGEFINWKKPENFKVLNFKNYTVKLYRFTKREK 243 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + L L++ N + E KRL L P+I G+++ A Sbjct: 244 FESIRYKTLPELISSNRIEA----------KVELFKRLGLSLAPLIVGILAFSLALIIPR 293 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 I + + + + ++ I + +P+L F + FL + Sbjct: 294 SSIGIGILLSLLIIVVYYILYTLTKKI--ALNTGIVLLPLLTDLFFFVLGGFLYI 346 >gi|149914657|ref|ZP_01903187.1| permease, YjgP/YjgQ family protein [Roseobacter sp. AzwK-3b] gi|149811450|gb|EDM71285.1| permease, YjgP/YjgQ family protein [Roseobacter sp. AzwK-3b] Length = 363 Score = 93.1 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 48/359 (13%), Positives = 107/359 (29%), Gaps = 14/359 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + LY+ R +FL V + ++I I++ + + + +L+I+ P+ Sbjct: 2 TLHLYLARRFLLTFLAIFSVFVILLFLIDIVKEMQDFPA--FPFSEILEIALLKAPSANY 59 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + T + M+RN+EL+++ +G S I + L +A L+ + N I Sbjct: 60 EILPLIVILATVALFLRMSRNSELVVVRASGRSAIRALVAPLVVAGLIGVVSVTMLNPIV 119 Query: 123 PKCRSTIKQLS-----AKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD 177 L + I + + + + Sbjct: 120 AASAKRHNDLMNSYLGWSINIMAIAPEGLWLRQGSETGQTVIHAERASSDVSTLYNTTFI 179 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI---SKDISIMKFKSYTLQTESAN 234 + + S L L D ++ S + S Sbjct: 180 AFGLDGTPQRRITAASATLGDGEWRLADAKLWDLSSGINPESTAQELDSYSVPSALTQDR 239 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 K ++ L Y L + LF + + AA Sbjct: 240 IIDSFGKPEYISIWDL-PKFIGQLEESGFSARRYAVWMQTELARPLFLIALVM--AAAAF 296 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 R + ++ + FG+ + ++ + +N +L + +++ L + Sbjct: 297 TMRHSRLHNTGVSVLTAIMLGFGLHYIRNFAQ-ILGENGQIPIMLAAWAPPVAAFLLAL 354 >gi|220916597|ref|YP_002491901.1| permease YjgP/YjgQ family protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219954451|gb|ACL64835.1| permease YjgP/YjgQ family protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 360 Score = 93.1 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 46/356 (12%), Positives = 110/356 (30%), Gaps = 13/356 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + +FL++ +V I + + + + + L +L++ Y V+ Sbjct: 2 ILFRYVARRMLGAFLVALTGVVGIYLAVDFVDNASAYTGAGW-LPAVLQLYAYKAAGVVY 60 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 MV P + + + E + G L PVL + +L L + +++ Sbjct: 61 MVAPAALILGAGIATSMFRQTREYTAMRAVGLGPWRLAVPVLAVTLLAGGVLVVLNDLVG 120 Query: 123 PKCRST------IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + + + + F +D + P+ + + + Sbjct: 121 VQAAERAEEITAHRFARGGNLRRFLAAREPKRWFRGMDGKRVYHLRGNLPDGGFERVTVY 180 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD-ISIMKFKSYTLQTESANS 235 + + D +A IL D E + K Y Sbjct: 181 -ELGEGFTLARRIDAARMHPDGRAWILEDVEDRTFRQDGSMGLERADRKRYAFDEPPDAF 239 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + I K + + L+ + + ++ E + RL L + + A Sbjct: 240 AVIAGKPDQMRWNTLIRQ-IGIRKRLGQPVTEFQLERYDRLAYPLAGI--PGALLALALA 296 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 R+ + ++ ++ +FWG + + + P + + + + L Sbjct: 297 LRRDRKGHLAAALLEAVGVT-LLFWGMQGVSSALGLSGRVAPWIASWAPNVVFLAL 351 >gi|83746689|ref|ZP_00943738.1| Hypothetical membrane spanning protein [Ralstonia solanacearum UW551] gi|207721411|ref|YP_002251852.1| permease protein [Ralstonia solanacearum MolK2] gi|207742608|ref|YP_002259000.1| permease protein [Ralstonia solanacearum IPO1609] gi|83726642|gb|EAP73771.1| Hypothetical membrane spanning protein [Ralstonia solanacearum UW551] gi|206586570|emb|CAQ17157.1| permease protein [Ralstonia solanacearum MolK2] gi|206594002|emb|CAQ60929.1| permease protein [Ralstonia solanacearum IPO1609] Length = 387 Score = 93.1 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 46/364 (12%), Positives = 115/364 (31%), Gaps = 20/364 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + L ++ +++ + + ++ S N +L + G L Sbjct: 17 IFEQALRRELSFTAGAVFLVLLTFMLTTLVIRILGMAANGEASPNDVLLLIGLATLGYLA 76 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT +++E+++ G S I+PVL ++ + + + Sbjct: 77 ILLCATLFISVLLVLTRWYKDSEMVVWFTAGLSLTDFIRPVLRFSLPFVVLVALLALFGW 136 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + + S + F Y+ + + + Sbjct: 137 PWANQQSALFRDRFEQRDVLSMISAGRFIEPAHGNYVLFIEGVDAGMKHARNLFVANAEA 196 Query: 183 THKIY----YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT-ESANSST 237 + ++ + ++L+ G + +P D I++F Y ++ Sbjct: 197 DKIGVALAKTGEFKTMPNGDRYVLLDKGRRYEGTPGQLDYRIVEFDRYGVKVASKPPQVD 256 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 L + + LL+ E R+ L + F LI++ A Sbjct: 257 ANLPTKSRPTTELLS----------NPTPENLGELVWRIGLPLLALNFVLIAVPLAY--- 303 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMIK 355 + + + P+ ++ I + + + + + L LL Sbjct: 304 VNPRLGRYTPMIFAVLIYLTYSNLLNLSQAWVAQGKINAMLAWWPIHLLAFICAVLLFRF 363 Query: 356 KKYT 359 + Y+ Sbjct: 364 RHYS 367 >gi|260363481|ref|ZP_05776317.1| conserved inner membrane protein [Vibrio parahaemolyticus K5030] gi|308112551|gb|EFO50091.1| conserved inner membrane protein [Vibrio parahaemolyticus K5030] Length = 348 Score = 93.1 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 42/339 (12%), Positives = 112/339 (33%), Gaps = 19/339 (5%) Query: 20 CLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTS 79 + + + + + S ++ I G +P + ++ P + Sbjct: 1 FFVLFLVFVSQKFISVLADASDGDIPAGLIFSIVGLNMPAMGLLMLPLSLYIGILITFGR 60 Query: 80 MNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLA 139 + +E+++++ TG L++ L+LA++ S + + P + ++ L + Sbjct: 61 LYAESEIVVMNATGIGNKFLVQAALYLALITSGVAAFNALWLSPWSQDRVEHLYEQVAAE 120 Query: 140 LTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHK-----IYYAQSGSI 194 + L++ F D + ++TL +F+ R + + + Sbjct: 121 NSVDLLKKGQFQGTPDGSSVVFIDDIKDSTLSNVFVAQMRPRDSVLPSVMFSSSGEVKEL 180 Query: 195 DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPN 254 RQ I + +G + P + I KF Y + L+ Sbjct: 181 SDGRQVITMQEGTRYEGVPTRVEYMITKFDEYEGVIGQREVKQKGRDWEAYPTADLI--- 237 Query: 255 PNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSI 314 ++E R++ + V L++++ A+ ++ + + ++ I Sbjct: 238 -------GHPDPEAQAELQWRISLF---VCIPLLTMLVIPLSAVNPRQGRFAKMGPAILI 287 Query: 315 SFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFLL 352 F S +E I ++ + + ++ Sbjct: 288 YLAYFLAISATKSALEDGAIPAAIGMWPINAMLLIVAIM 326 >gi|297171529|gb|ADI22527.1| predicted permeases [uncultured Oceanospirillales bacterium HF0500_09M11] Length = 354 Score = 93.1 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 43/360 (11%), Positives = 125/360 (34%), Gaps = 28/360 (7%) Query: 14 RSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMET 73 + ++ +V + + ++ + ++ + + L + + +P L M+ P + Sbjct: 1 MTTVLVTFILVMVLVSGRFIKYLAEAAAGQIAADALFLVMAFRLPEFLQMILPLSLYIAI 60 Query: 74 TNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLS 133 VL M+ + E++++ G +++ ++ A++ + + + P+ + + ++ Sbjct: 61 LLVLGRMHMDNEMVVLRAGGQGDGRVVRSLIVPALVAMSVIALFALYVTPQGDAEVNRIF 120 Query: 134 AKAQLALTFSYLEENLFFRLDDDLYIKI--------SKYNPNNTLQGIFIVDSRDTQTHK 185 + + L F DD + + + S + Sbjct: 121 EEQKGRSVLELLTPGRFHVKGDDDNQRATYAESLNREEGVLESVFVADASFSSEEAGRLL 180 Query: 186 IYYAQSGSIDLDRQAIILN--DGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 +A+SG++ L DG ++ P D + F+ ++ S SS+ + Sbjct: 181 TVWARSGNLVQQDGISYLELTDGYQYQGKPGEADYREVAFEKARVRIGSERSSSRPPEVR 240 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 ++ L++ + +E R + L I L A + ++ Sbjct: 241 GRSTLDLID----------DGGNQAMAELAWRWSLVLTVPIMCL---AAVPLSRVNPRQG 287 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQN-----PYYIPILYLFLFCISSIFLLMIKKKY 358 + + ++ + I + P+Y ++++ L ++F+L + Sbjct: 288 RFLRMIPAVLGYMLYVGLLLTMRSWIAEVPGSERPWYYSMVWIHLIAGFAVFMLYFGGRL 347 >gi|124514758|gb|EAY56270.1| putative permease, YjgP/YjgQ family [Leptospirillum rubarum] Length = 378 Score = 92.8 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 56/360 (15%), Positives = 124/360 (34%), Gaps = 7/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+ + F++ L +V + Q L +NL+ + S+ +L++ + P Sbjct: 1 MKIIHRYLFVELLPPFVIGLLVLVVLILTQQTLMIMNLLVNKGLSIPTVLRLVMMIFPQF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P +T + + E+ + +G L+ P++ A L + F Sbjct: 61 LTMIIPVSVLAASTATFNRLASDGEITALKASGIGLSRLLWPLVLFAFLGYVGSFYMSLK 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 E +++++ + + +F D I + + + +QG+FI Sbjct: 121 AEETQGMSLQEMISTVLKKKMSLGIRPQVFNNFMDRFVIYVDRMPTFSRMQGVFIYQEGK 180 Query: 181 TQTH-KIYYAQSGSIDLDRQAIILNDGEVHRKS--PISKDISIMKFKSYTLQTESANSST 237 ++ + A+ GS+ + ++ + ++F SY L ++ T Sbjct: 181 GKSPSTVIMAREGSLLNEENGRPGIRIQLRSGTLLQGGAAQQFVRFSSYDLTIFGKSAGT 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L N +P LL +K T +IF + I Sbjct: 241 TAKPP---TIRELENKIAGSPKPDVSLLRELEDR-YKNYTYPFSCLIFAFLGIPFGIYAK 296 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + S+ + + ++ + P+ ++ FLL++ K Sbjct: 297 RSGKLAGFVFATASVIFFYILNTVDDLLVARRLLKPFVASLIPDLALGTVMGFLLIMVFK 356 >gi|241765202|ref|ZP_04763186.1| permease YjgP/YjgQ family protein [Acidovorax delafieldii 2AN] gi|241365131|gb|EER60003.1| permease YjgP/YjgQ family protein [Acidovorax delafieldii 2AN] Length = 368 Score = 92.8 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 45/368 (12%), Positives = 118/368 (32%), Gaps = 12/368 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS---STESLNILLKISGYLI 57 MK +I R + L + + + ++ + V S + L+ L I Sbjct: 1 MKVLRRFIHREAFFAVGFVTLGFLALFFFFDLIDELRWVGSTGQNGYQLSHALLFVSLSI 60 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 P+ L + P + T V+ + +++E I+ +G ++ +L L + F Sbjct: 61 PSHLYELLPITVLIGTIFVMARLAQSSEFTIMRTSGMGPWRALRTLLTLGGFFVLLTFAI 120 Query: 118 ENIIEPKCRS--TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI 175 + + P + ++ +L + + + + + Sbjct: 121 GDYVAPLTERAAQLIKVRHLGRLTSGATGAWLKERQQDHSFAVNVRALSSDGGMVDVRIF 180 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + +A +G + S++ + + Q + S Sbjct: 181 EFDEKGRLASQIHAATGQFGSAGTWDLQQVQRNSFVQKSSEEARVESISAPVWQWPTRIS 240 Query: 236 STIVLK---ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + +V D+ + L + + + Y EF +++ L ++ ++++ Sbjct: 241 ADMVAASLLKPDRMATVDLFQYIRHLEANGQSAQRYEIEFWRKVFYPLSCLVMVVLALPF 300 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYY---IPILYLFLFCISS 348 A + ISF + F Y + +P+ P L + +++ Sbjct: 301 AYLHFRAGGIAGYVFGGVMAGISFFLLNNVFGYAGNLQNWSPWLTAAAPGLIYSVLSLAA 360 Query: 349 IFLLMIKK 356 L++++ Sbjct: 361 FGWLVLRR 368 >gi|206890381|ref|YP_002249742.1| putative permease, YjgP/YjgQ family [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742319|gb|ACI21376.1| putative permease, YjgP/YjgQ family [Thermodesulfovibrio yellowstonii DSM 11347] Length = 351 Score = 92.8 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 54/357 (15%), Positives = 125/357 (35%), Gaps = 6/357 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + R + ++ +S F+ + + ++ + + +S L L+ + L P + Sbjct: 1 MKVIYKALTRELLQNIGLSIAFLNAVLIIEKLFKLSKIFASVGIDLPNLVLLILLLQPQL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + + E+ I +G KP +++ ++ F + Sbjct: 61 LIFTIPMALLLSILLTYGRTQADNEMTIFMVSGMPYKKTFKPAIYIGLIAFFFTVLMSFY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P S +++ LEE +F + D+ I + + + L+ + I D R Sbjct: 121 LAPTGVSLVREKILTILAERAPLGLEEGVFNQGFKDVTIFVKEKPDSLHLKEVVIFDERK 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 T + A+ G I +R I L+ ++ + FK Y + N I Sbjct: 181 NDTKIVI-AKGGLIKKERDNINLSLLNGKAYFNKGLTLNEVSFKEYIFRLS-PNIDPIAK 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K ++ +L L++ Y+ E +KR L ++ ++ Sbjct: 239 KVSELSLFELVSKIQTEEVKAI----DYKLELYKRFALPLLCIVSVFLAPSLCLIVGKTG 294 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + I + + + + + + + +L + + I + + +K Sbjct: 295 RIGGITVGLAIFAFYYILMIYGANLAKAGKVSAEIGSLLPVIVMAILAFTMYTRIRK 351 >gi|332187143|ref|ZP_08388883.1| hypothetical protein SUS17_2304 [Sphingomonas sp. S17] gi|332012843|gb|EGI54908.1| hypothetical protein SUS17_2304 [Sphingomonas sp. S17] Length = 366 Score = 92.8 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 49/354 (13%), Positives = 119/354 (33%), Gaps = 11/354 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRIN-LVSSSTESLNILLKISGYLIPTV 60 ++ +Y+ + +V + + IL ++++ + + P + Sbjct: 10 RTIAIYMAKMFLLRTFAILFALVIVLQALDILSESGAILATPGNGEAQVWRYVSLRAPQI 69 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + PF + T +MN+N+E++ + G S ++ P+L + +++ F + Sbjct: 70 IAFILPFSVLLGTILTFFTMNQNSEVIALKAAGLSAHQVLAPLLVASAGVAVLSFAFNDR 129 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD---LYIKISKYNPNNTLQGIFIVD 177 I P+ +T+ + + + + D D + N L G+ + D Sbjct: 130 IVPRATATLSAWQKVDYGPIPIDSGDRSNVWVRDGDDLISVDLVQGRGANTQLGGVTLYD 189 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + + + I G R S ++ + + Sbjct: 190 RKGGGSLQAIVRAPRGRRMGDGWQI---GPATRFEVASGKLTSIPSMIIGRGVTPEQLTL 246 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + A+ + L N ++ +T +L+ + ++ L+ VAA A Sbjct: 247 ASVNADGLSFKGLSNA-IDDLREAGRPTKTLEGSLWHKLSAPMSAILMPLLGAVAAFGIA 305 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + I ++L +F V FS + Y P L + + + Sbjct: 306 RSGKLFVRAVIGMALGFAFFVADNFSMA---MGDLGAYPPFLAAWAPILLFFLI 356 >gi|71891829|ref|YP_277558.1| putative transmembrane protein, transport [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71795935|gb|AAZ40686.1| putative transmembrane protein, transport [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 357 Score = 92.8 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 42/352 (11%), Positives = 124/352 (35%), Gaps = 1/352 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 YI++ + S L ++ ++ VI+++ + + S ++ +P Sbjct: 3 NILNYYIVKTVISSTTTVFLVLLSLSSVIKLIDELRKIGEGNHSFFDVIIYMILSLPKDF 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L + + E + + +G SR+ + V+ ++ + + IS I Sbjct: 63 ELFFPIATLLGGLLGLCMLEVHNEFIAMQISGFSRLQITLSVIKASVPVLLCSIISNEWI 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + ++Q + ++ + +D + ++ + N L G+ + + + Sbjct: 123 VPNSEKIMCMYRNQSQHDASLLSIKIKNLWFIDKNDFVCVENVIAYNELLGVKLYNFNEE 182 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + K ++ +D+ ++N E+ S + + + S ++ Sbjct: 183 RKLKKICYIERAVFVDKVWHLINVNELDISQKTSVVNKNIPHSKWNAELTPYRLSMMITH 242 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 N ++S L + N + + Y+ F K++ + + ++++ ++ Sbjct: 243 PNFLSISKLYHC-AKYFNRIGQNSKYYQVIFWKKILSPISGSVMTIMALAFTFGPLYKKK 301 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + F + I+ I I + + + ++M Sbjct: 302 IGIRLFVGSIAGFLFYILNQIFGILSAIHSVSPIIGSISPSIIFLVISVIIM 353 >gi|78356991|ref|YP_388440.1| permease [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219396|gb|ABB38745.1| permease, putative [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 397 Score = 92.8 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 53/367 (14%), Positives = 127/367 (34%), Gaps = 17/367 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + + + F + ++ + + ++LQ L + + + YL P L Sbjct: 11 TLLQKQLFKELVSLFGLCLGSLLSLILIGRMLQLRELFLGLDLNALDMATLFVYLSPLFL 70 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 ++ P + M+ + EL+ + G S L+ L +L + Sbjct: 71 TLIIPIACMLSVFLAFLRMSTDRELVALKAGGLSLFQLLPAPLLFCLLCGLLNLYISLSG 130 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSRD 180 + + L+ +F + L + + ++ L + + D+ Sbjct: 131 VAWGMGNFRHTIMEIANTRAKIVLQPGVFNQTVPGLTVFARTVDNSSGKLGHVLVEDNSR 190 Query: 181 TQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTES--AN 234 +T + A G + D Q IL++G+++R+ S + + L Sbjct: 191 DETSILILAPRGQLRSDEQRGELVFILHNGKIYRQQEDSVSVLDFNDYTVRLDLGQIFKG 250 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPEL--LETYRSEFHKRLTQWLFPVIFGLISIVA 292 S +K + + S L + P++P R + L E KR + ++ GL ++ Sbjct: 251 VSLGKVKPKELSWSELRSIGPDHPEARRDSNFLRKVHVELQKRWVLPMACLVLGLFAMPL 310 Query: 293 ADKRALVRQRKKIHPIFISLSIS-FGVFWGFSYIIHKIEQNPYYIPI--LYLFLFCISSI 349 A + I L++ F +++ + ++ P L++ ++ Sbjct: 311 ACA-----FQGLDKQFGILLALGMFLIYYTMLSVGLSTGESGTVPPAVGLWMPNLIFLAV 365 Query: 350 FLLMIKK 356 L + + Sbjct: 366 GLFWLDR 372 >gi|313200017|ref|YP_004038675.1| permease [Methylovorus sp. MP688] gi|312439333|gb|ADQ83439.1| permease YjgP/YjgQ family protein [Methylovorus sp. MP688] Length = 355 Score = 92.8 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 39/352 (11%), Positives = 112/352 (31%), Gaps = 15/352 (4%) Query: 13 GRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAME 72 + + + L + I ++ I + + + + + + + G+ + LPM+ + Sbjct: 1 MGTAIGAFLVLFGIVIAQRVAYYIGVAAKGSLASDAINTLLGFSMLKFLPMILSLTIFLA 60 Query: 73 TTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQL 132 LT +R++E+++ ++G I+PVL AI + + + + P + + Sbjct: 61 VLLTLTRWHRDSEMVVWFSSGMGLAGWIRPVLTFAIPVVAVIAVLSLFVTPWATNKGSEF 120 Query: 133 SAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYA--- 189 + + + + +F + + + I Sbjct: 121 RDQLKSRDELASISPGVFKESRNADRVFFVESFDELGNVVKNIFVQSVQHQRLGVVVASQ 180 Query: 190 -QSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLS 248 D +++ G + P + + S +F+ Y+++ E Sbjct: 181 GHRTVADNGDNFLVMEHGRRYEGKPNTAEFSTTEFERYSIRIEPNEVKEEPPGTAALGSV 240 Query: 249 FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPI 308 LL +E RL + + L++I + + + Sbjct: 241 ELL----------KNHNPANNAELQWRLAIPISAFLLVLLAIPLSFVDNRSGRSANMMLA 290 Query: 309 FISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + I + + + + NP + + + +F + + ++ + Sbjct: 291 LLIYIIYNNMLSIVQAWLTQGKLNPV-VGLWPVHVFFLLLTIWMFYRRLLQR 341 >gi|321222550|gb|EFX47622.1| putative Permease [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] Length = 336 Score = 92.8 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 41/336 (12%), Positives = 104/336 (30%), Gaps = 2/336 (0%) Query: 22 FIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMN 81 +V ++ +I+ + ++ + +P + + P + L + Sbjct: 1 MLVSLSGIIKFVDQLKKAGQGNYDALGAGMYTLLSVPKDIQIFFPMAALLGALLGLGMLA 60 Query: 82 RNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALT 141 + +EL+++ +G +R+ + V+ AI L + + P+ + A+A + Sbjct: 61 QRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAPQGEQMARNYRAQAMYGGS 120 Query: 142 FSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAI 201 ++ L+ + ++ + + + YA S D + + Sbjct: 121 LLSTQQGLWAKDGNNFVYIERVKGDEELAGISIYAFNDQRRLQSVRYAASAKFDPEHKVW 180 Query: 202 ILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNY 260 L+ + +P S ++ + L + ++S L N Sbjct: 181 RLSQVDESDLQNPKQITGSQTVSGTWKTNLTPDKLGVVALDPDALSISGLHN-YVKYLKS 239 Query: 261 RPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFW 320 + Y+ ++ Q L + L+++ IS F V Sbjct: 240 SGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPMGVRVVTGISFGFVFYVLD 299 Query: 321 GFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + P + L LM++K Sbjct: 300 QIFGPLTLVYGIPPIVGALLPSASFFLISLWLMLRK 335 >gi|115525295|ref|YP_782206.1| permease YjgP/YjgQ [Rhodopseudomonas palustris BisA53] gi|115519242|gb|ABJ07226.1| permease YjgP/YjgQ family protein [Rhodopseudomonas palustris BisA53] Length = 361 Score = 92.8 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 42/356 (11%), Positives = 98/356 (27%), Gaps = 10/356 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y + + L + + + + + ++ + S + +P +L Sbjct: 4 NTLGRYFAGKFVTAAVGVFLGLFVLLVFVDYIDLLRRSGGRAIPALLIAQTSMFRVPQLL 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PFC + +++R EL++ G S + P L+ A+LL F + N + Sbjct: 64 ERLMPFCILIGAMTCYLALSRRLELVVARAAGVSAWQFMAPALWSALLLGTFATMVFNPV 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL----YIKISKYNPNNTLQGIFIVD 177 + KQ A + S + + F+ + I S L V Sbjct: 124 SANLQERAKQNEASMFGDSSGSLQDASGFWINQVNSEGQAIINASHSQQQGVLLTGLTVF 183 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 T ++ L+ L + + + A Sbjct: 184 RFATDFSFKDRLEAREATLEPGFWRLKSVRRYSLDAPPVEEDTLL---LPTTLTQAQVRN 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L + + YR ++HK L + +++ + Sbjct: 241 SFSTPETVSFWQLPS-YIRSSESSGFATAGYRLQYHKLLARPFLLAAMVMLAASVSL--R 297 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 R + + F ++ + + + + M Sbjct: 298 FFRFGGVQKMVLSGVGAGFLLYILSKVTEDLSKAELMHPLAAAWLPVFVGGLAGFM 353 >gi|186476977|ref|YP_001858447.1| permease YjgP/YjgQ family protein [Burkholderia phymatum STM815] gi|184193436|gb|ACC71401.1| permease YjgP/YjgQ family protein [Burkholderia phymatum STM815] Length = 370 Score = 92.8 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 51/362 (14%), Positives = 117/362 (32%), Gaps = 16/362 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ + +++ + +S +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTLVLTTMMIRIVGFAASGEIDPRDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT +++E+++ +G S I+P+ A + I + + Sbjct: 62 IMLVATLFVSILFVLTRWYKDSEMVVWLASGVSLARFIRPIGVFATPIIILIAFFVFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P K + A+ Q S L F + + + + + Sbjct: 122 PWSNQQSKLIRARFQQRDEVSLLAPGQFRESAASHRVFFIEKMSPDQGHVENVFVTSTEN 181 Query: 183 THKIYYA----QSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + + ++L +G + P D IM+F+ Y ++ +S + Sbjct: 182 GKVNVVVSKNGHTETHKNGDRFVVLENGRRYDGEPGHPDFRIMEFERYGVKIQSQPVVST 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD-KRA 297 L +P N +EF R L + L++I A Sbjct: 242 PTTTGTPTLDLFRDPTRQNL-----------AEFAWRAGLPLIAINLMLLAIPLAHQNPR 290 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 R + + I L+ S + S+I + L++ + I + + Sbjct: 291 RSRTINLVMAVLIYLTYSNLLNVVQSWIEQGKMSFGVGLVGLHILVALIVVFIFWLRVRN 350 Query: 358 YT 359 Sbjct: 351 RP 352 >gi|302338545|ref|YP_003803751.1| permease YjgP/YjgQ family protein [Spirochaeta smaragdinae DSM 11293] gi|301635730|gb|ADK81157.1| permease YjgP/YjgQ family protein [Spirochaeta smaragdinae DSM 11293] Length = 381 Score = 92.8 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 62/375 (16%), Positives = 131/375 (34%), Gaps = 20/375 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + Y+L+ SF ++ +F FI +V Q+L V S + +L + Y +P +L Sbjct: 11 RIADAYLLKEFFFSFCIAFIFFFFIFFVNQLLLLAEEVLSKRVGVTKVLLLILYSLPAIL 70 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PF + T + + + E+ G S + L PV+ L ++LS F S +++ Sbjct: 71 AFTFPFSALLGTVMAIGRFSSDNEITAFRALGVSHLRLFFPVMLLGLILSGISFFSNDVL 130 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ +L + LE R D + ++ + + + I+D + Sbjct: 131 LPRGTVQFGRLYRDILYSNPALELEPYAVRRYKD--TVLVTGAISDREISDLVILDHDED 188 Query: 182 QTHKIYYAQSGSIDLDRQ-------AIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 Q ++ A+ ++ D + + G +K D Y + S Sbjct: 189 QNERMLSAKRAYLEQDEKENGVISLRLEEVFGHTAKKREGDFDYFTADTMEYNILLSSFT 248 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLET---------YRSEFHKRLTQWLFPVIF 285 S L + + + L + E Y+ EF+K+L L F Sbjct: 249 YSINNLTPREMSTAALYGEIQTMEAKKKEDQNKKRFDRTLQLYKIEFYKKLAIPLGCFTF 308 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC 345 + A + + + + + + + + + ++ Sbjct: 309 MFFAFPAGLLPKRSGRWVGFVLGLFAAAFYWMLLIVGQTLGVRFQVSAALA--MWFPNIF 366 Query: 346 ISSIFLLMIKKKYTK 360 I+ I LL+ + + Sbjct: 367 IAFIGLLIYLSRSHR 381 >gi|15602061|ref|NP_245133.1| hypothetical protein PM0196 [Pasteurella multocida subsp. multocida str. Pm70] gi|12720419|gb|AAK02280.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] Length = 368 Score = 92.8 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 41/314 (13%), Positives = 116/314 (36%), Gaps = 18/314 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + +S L ++ I + Q+++ + +S ++++ + G +PT+ Sbjct: 2 ILTRYLTKEVLKSQLAILFILLLIFFCQQLVRVLGSAASGKVPADLVMSLLGLGMPTMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P C + + +E+ ++ G + L++ VL L++ + + + Sbjct: 62 LMLPLCLFIAILLTFGRLYAESEITVMRACGVGQKILVRVVLILSLFTASIAAYNVFWLT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+ T L F +++ ++ +NT+ +++ +R+ Sbjct: 122 PWAIQKQSEILEGAKANPTMGALASGQFINTNNNEFVLFIDSIKDNTIHDVYVFQTRERG 181 Query: 183 T--HKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G + Q + L + + S D I F+ Y + + Sbjct: 182 NLKPSVLVAEKGELQALPNGDQILKLENSQRVEGSSAFPDFRITHFEEYQAYLGYQDKNN 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + L+ ++E + RL+ L + LI++ Sbjct: 242 DEQETEELGFWDLM----------KTHTPAAKAELNWRLSLILAVPLMALIAVPL---SR 288 Query: 298 LVRQRKKIHPIFIS 311 + ++ + + + Sbjct: 289 VNPRQGRFAKVLPA 302 >gi|332829399|gb|EGK02053.1| hypothetical protein HMPREF9455_00175 [Dysgonomonas gadei ATCC BAA-286] Length = 365 Score = 92.8 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 118/357 (33%), Gaps = 11/357 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN-ILLKISGYLIPT 59 + + YI++ +++ S + I+ IA V I ++++ L I+ +P Sbjct: 4 LSILDRYIIKKFLGTYIFSIILIISIAVVFDINEKLDKFLDKKAPLTAIIFDYYVNFVPY 63 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + + + + + N+E++ + + G S L+KP + A ++++F F+ + Sbjct: 64 YTNLFSALFVFIAVIFFTSKLADNSEIIAMLSNGMSFKRLMKPYMISAGIIAVFSFVLSS 123 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 I P T + K + + ++D + + I +++ +D Sbjct: 124 FIIPPANVTRIKFQNK-YVRDKSVEYASGIQLQVDKGVILYIERFDNKTKEGYNLSLDKI 182 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + K L + ++ + + IS TL ++ V Sbjct: 183 EDKELKSRLTAQRIKYDSAYHWELYNYKIRELQGMREVISNGDKIDTTLNVVPSDFLISV 242 Query: 240 LKANDQNLSFLLNPNPNNPNY-----RPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 L + + + EFHKR I +I Sbjct: 243 NDFEQMTTPVLYKYIQRQRDKGIATVGDVSITQFEIEFHKRFASVFSAFILTIIGASL-- 300 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 A + I I L +S + F + + L +++ + + + Sbjct: 301 -SARKVKGGMGLNIGIGLGLSVS-YIMFQTVSSSFAVSGTMPAWLAVWIPNLVFMAI 355 >gi|330994316|ref|ZP_08318244.1| putative permease [Gluconacetobacter sp. SXCC-1] gi|329758783|gb|EGG75299.1| putative permease [Gluconacetobacter sp. SXCC-1] Length = 410 Score = 92.8 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 57/367 (15%), Positives = 126/367 (34%), Gaps = 7/367 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + Y+LR + F ++ ++ + ++L NL++++ S+ + LIP L Sbjct: 17 TTMDRYLLRQVVPPFSIALGVVMAALLLERLLVLFNLLAANGSSMKTFFALLSDLIPHYL 76 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + +V+ M+ N E+ + +G S + +P + + F I Sbjct: 77 GLALPAAMCVSVFSVIRRMSANHEIDALMASGVSIFRICQPFVLTGAIFGFLAFSLYGFI 136 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 +P R + A A +L+ +F DD + + + + + +FI D D Sbjct: 137 QPYARYDYRSAFYFASHAGWTPHLQSKMFALSDDIVLTAENVDHAGSRMWNVFIRDGTDK 196 Query: 182 QTHKIYYAQSGSIDL----DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + AQ G + + L DG V S ++ + + T Sbjct: 197 AHVRFISAQKGYLFNPADGSNIRLDLVDGTVITDSQDKPPTITSFSRTTRMISTKGKLDT 256 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPE---LLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + + L P +E + RL + +++ A Sbjct: 257 EAYRKRGETERELTVPELYYGIRYGNPTISHSYMIAELNFRLARTAAIPFIPILACALAG 316 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R + + I+L + + +P + L +F + + +L+ Sbjct: 317 VRKRQKNNPGLAIAAITLVGFDHTLQMGMSFVANMHMSPLLVIWLPTLVFSLICVGVLIR 376 Query: 355 KKKYTKI 361 + +I Sbjct: 377 QAGGLRI 383 >gi|254446939|ref|ZP_05060406.1| permease YjgP/YjgQ [gamma proteobacterium HTCC5015] gi|198263078|gb|EDY87356.1| permease YjgP/YjgQ [gamma proteobacterium HTCC5015] Length = 347 Score = 92.8 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 48/351 (13%), Positives = 111/351 (31%), Gaps = 8/351 (2%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTVLPMVTP 66 + R I + + L I+F+ L V+ S + +P P Sbjct: 1 MARAILAATALVLLVILFLDAFFGFLGEGKYVARYADYSYWHAIGYVMLRVPGKAMEFMP 60 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + L ++ N+EL + G S+ ++ + +++++ + + + P+ Sbjct: 61 AITLIGALLGLGTLASNSELTAMRAAGLSKGRIVWGGMKTGLIIALAVALLGEYVAPQSD 120 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 A+AQ S L + D+ +YIK ++ + IF + + Sbjct: 121 LKAAAFRAQAQGRAITSELRDFWLKNGDEFVYIKRAEPDKRLRGVRIF----QVQEGELK 176 Query: 187 YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 ++ S LN +R + ++ + + + L + Sbjct: 177 RLLKAASAQHTASGWRLNQVREYRFEDDAVSRKVIGQMTKSQLVDVDLFEVAQLSPENMR 236 Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 L L N + YR F K++T L ++ L+++ R Sbjct: 237 LLELDN-YIAYLDDNRLEATLYRKAFWKKVTAPLSILVMLLLAMPFIFANR--RSGNAGA 293 Query: 307 PIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + I + + S I + + + + + + K+ Sbjct: 294 RLVIGILFGMSYYIISSLIENLGQVYGVPVLLGAFTPIVAFTALGFWLLKR 344 >gi|209964865|ref|YP_002297780.1| predicted permease YjgP [Rhodospirillum centenum SW] gi|209958331|gb|ACI98967.1| predicted permease YjgP [Rhodospirillum centenum SW] Length = 364 Score = 92.4 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 46/355 (12%), Positives = 103/355 (29%), Gaps = 13/355 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTVL 61 + LYI R FL ++ I +++ ++ + ++ + I+L + +P + Sbjct: 6 TLSLYIGRQFVLWFLAILGGMLAIVYLLDTVELLRRAANKPDAAFQIVLTMGLLKLPEIG 65 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFL-----FI 116 + PF + R EL+++ +G S + PVL L+ + L I Sbjct: 66 QEIVPFVVLFGGMYTFWRLTRTQELVVVRASGISVWQFMAPVLTATFLIGMTLVGVLNPI 125 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 ++ + + L I P +V Sbjct: 126 FSAMLGRYEQLENRYLRGMKSSLDVAESGIWLRQVGEPQAYLIHADAIVPGTLELRQVMV 185 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 ++ + S L L D + + + + Sbjct: 186 LLNESDGQVSGRFDAASATLRDGFWELRDA---WFNRPGRVGEFLPAYRLPTELTEQKIQ 242 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + L +R +H L Q + L++ A Sbjct: 243 EAFASPDTLSFWEL-PGFIATLEATGLSSVRHRLHWHSLLAQPVLLCAMILLAAAFAM-- 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 VR+ + I + ++ + +F I+ + + +L + S+ L Sbjct: 300 RQVRRGGALTLIALGIAAALLLF-VMQDIVLALGMSGTIPVLLAAWAPAGVSVML 353 >gi|325282730|ref|YP_004255271.1| permease YjgP/YjgQ family protein [Deinococcus proteolyticus MRP] gi|324314539|gb|ADY25654.1| permease YjgP/YjgQ family protein [Deinococcus proteolyticus MRP] Length = 387 Score = 92.4 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 46/368 (12%), Positives = 125/368 (33%), Gaps = 12/368 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ FE Y+L I + + ++ + + + + + + S ++ ++ +P Sbjct: 23 MRRFETYVLSEILPLLVAALSALIVLLMLKGLEDVLAPLLAKGASPALVAQLLALNVPEA 82 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P L+ ++ ++E+ + G TL +PVL LA L+++ F + Sbjct: 83 MAFGLPLALMFAALLGLSRLSGDSEIKAALSGGIPGTTLFRPVLLLAALVTLLSFGINEV 142 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENL-----FFRLDDDLYIKISKYNPNNTLQGIFI 175 + + + + + + L R D I + + TL+ + I Sbjct: 143 LVTRAKVQAQSVQRQIVLDNPRVIGLAQTAGGGLVLRDALDRAISVGSVGEDGTLRNLRI 202 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 V + + + + ++ G ++ ++++ F++ L + + Sbjct: 203 VTMQPGLPPREVITAREGVLQEGSNVLELRGGQRVSYQGARPVTVLNFETGQLPVQDVQA 262 Query: 236 ST---IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 S L L L + + + +++ Q L + ++ Sbjct: 263 SFDGGSGLDPFYLPLGTLKERTDGYRDSGIRSPGDFTA-LYRKFAQPLSALALAFFAVSL 321 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 A + + +L +SF + +S E P+ I+ + Sbjct: 322 AL---YTFRSGLNLGLVWALLLSFAYYATWSVFRVMGENGALPAPVAAFGPDVIALLAGA 378 Query: 353 MIKKKYTK 360 ++ + ++ Sbjct: 379 LLLWRASR 386 >gi|317493503|ref|ZP_07951924.1| YjgP/YjgQ permease [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918446|gb|EFV39784.1| YjgP/YjgQ permease [Enterobacteriaceae bacterium 9_2_54FAA] Length = 356 Score = 92.4 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 70/364 (19%), Positives = 143/364 (39%), Gaps = 16/364 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+ I R ++ F++FI + + ++ T +L ++L I Y + Sbjct: 1 MKLIEHYIMAEIRRLVVIIVGFLIFIFASYSAQRYLTEAANGTLALEVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L + ++E+ I G S I L K V+ LAI LSI + + Sbjct: 61 LEMLLPVGLYVSVGVALGQLYTDSEITAISAIGASPIRLYKAVMLLAIPLSILVTLMSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + I QL ++Q L S+L +F D I + NP++ ++ + Sbjct: 121 ARPWAYAQIYQLEQQSQSELDVSHLRAKMFNINDSGRMILSEEINPDSNHLTDVLIYTSS 180 Query: 181 TQTHKIYYAQSGSIDLDRQAI---ILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 +Y A++ + IL+ G + D S +++ TL + N S Sbjct: 181 GNKTSVYRAKTVDVTNPSPITPSVILHSGTGYTLRHQGTDDSERVYRNLTLDLKPLNLSV 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ + + +P + +E R ++ + + L++I R Sbjct: 241 DAKRKAKSVIALIRSADPAD-----------YAEVQWRESRGVNAFLMALLAIS--LSRV 287 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 RQ + + +++ + + G P ++L + L++I + Sbjct: 288 KPRQGRFSTLLPLTILFTVIFYGGNVCRSLVASGYLSVTPGVWLVPMLMFIGVLVLIARD 347 Query: 358 YTKI 361 ++ + Sbjct: 348 FSLL 351 >gi|207721412|ref|YP_002251853.1| permease protein [Ralstonia solanacearum MolK2] gi|206586571|emb|CAQ17158.1| permease protein [Ralstonia solanacearum MolK2] Length = 401 Score = 92.4 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 44/395 (11%), Positives = 114/395 (28%), Gaps = 41/395 (10%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M +E Y R I F+ ++ + +L + V +L PT Sbjct: 7 MPVYEKYFARQIYGVFVFILFAVLALFIFFDMLSELGSVVGRYTTLIAFFH-VMLQAPTR 65 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + V + M +E I G + + +A+ L++ ++ Sbjct: 66 VYEVIPVAALISAIYVFSQMASQSEFTIFRVAGLDTRGALLSLFKIALPLALVTYVFGEF 125 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-----------LYIKISKYNPNNT 169 I PK +++ +A A + ++ + ++ + P+ T Sbjct: 126 IGPKSEQFAQKVRLEALGATVSAEFRSGVWVKDRGPARPDGSGGEVTRFVNVGSLQPDQT 185 Query: 170 LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKS----------------- 212 ++ + I + + Q+ L+D Sbjct: 186 IRSLRIYEFDADYRLSSIRVAQQARYQGHQSWELDDVTQTHFIEFPRKAGAAAPQDNRQA 245 Query: 213 -PISKDISIMKFKSYTLQTESANSS--------TIVLKANDQNLSFLLNPNPNNPNYRPE 263 P + D F+ + ++++ ++ + L + + Sbjct: 246 VPGAPDALAPDFRGEQTKLPKQEMRSELTPQILSVLMVTPERMATLDLFQYIRHLRDNKQ 305 Query: 264 LLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFS 323 + Y K++ ++ +++ A R +F + + + Sbjct: 306 DTQRYEIALWKKVVYPFTVLVMMALALPFAYL--HARAGAVGLKVFGGIMLGLSFQLVNN 363 Query: 324 YIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 H N + I + + + +I ++ Sbjct: 364 LFSHVGLLN-TWPAIFTAIVPGALYLAVALIALRW 397 >gi|83746688|ref|ZP_00943737.1| Hypothetical membrane spanning protein [Ralstonia solanacearum UW551] gi|207742607|ref|YP_002258999.1| permease protein [Ralstonia solanacearum IPO1609] gi|83726641|gb|EAP73770.1| Hypothetical membrane spanning protein [Ralstonia solanacearum UW551] gi|206594001|emb|CAQ60928.1| permease protein [Ralstonia solanacearum IPO1609] Length = 401 Score = 92.4 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 44/395 (11%), Positives = 114/395 (28%), Gaps = 41/395 (10%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M +E Y R I F+ ++ + +L + V +L PT Sbjct: 7 MPVYEKYFARQIYGVFVFILFAVLALFIFFDMLSELGSVVGRYTTLIAFFH-VMLQAPTR 65 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + V + M +E I G + + +A+ L++ ++ Sbjct: 66 VYEVIPVAALISAIYVFSQMASQSEFTIFRVAGLDTRGALLSLFKIALPLALVTYVFGEF 125 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-----------LYIKISKYNPNNT 169 I PK +++ +A A + ++ + ++ + P+ T Sbjct: 126 IGPKSEQFAQKVRLEALGATVSAEFRSGVWVKDRGPARPDGSGGEVTRFVNVGSLQPDQT 185 Query: 170 LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKS----------------- 212 ++ + I + + Q+ L+D Sbjct: 186 IRSLRIYEFDADYRLSSIRVAQQARYQGHQSWELDDVTETHFIEFPRKAGAAAPQDNRQA 245 Query: 213 -PISKDISIMKFKSYTLQTESANSS--------TIVLKANDQNLSFLLNPNPNNPNYRPE 263 P + D F+ + ++++ ++ + L + + Sbjct: 246 VPGAPDALAPDFRGEQTKLPKQEMRSELTPQILSVLMVTPERMATLDLFQYIRHLRDNKQ 305 Query: 264 LLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFS 323 + Y K++ ++ +++ A R +F + + + Sbjct: 306 DTQRYEIALWKKVVYPFTVLVMMALALPFAYL--HARAGAVGLKVFGGIMLGLSFQLVNN 363 Query: 324 YIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 H N + I + + + +I ++ Sbjct: 364 LFSHVGLLN-TWPAIFTAIVPGALYLAVALIALRW 397 >gi|305664654|ref|YP_003860941.1| hypothetical protein FB2170_00060 [Maribacter sp. HTCC2170] gi|88707355|gb|EAQ99601.1| hypothetical protein FB2170_00060 [Maribacter sp. HTCC2170] Length = 341 Score = 92.4 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 47/344 (13%), Positives = 116/344 (33%), Gaps = 8/344 (2%) Query: 19 SCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLT 78 L + I + + ++I + + N ++ + ++ P + + Sbjct: 1 MLLLFIPIGIMANLAEQIGKMIDNDAPTNEIIIYYVNFTIYIGSLLFPIFLFLSIIFFTS 60 Query: 79 SMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQL 138 + NTE++ I ++G S ++P L A ++++ + + I P + K Sbjct: 61 KLASNTEIVAILSSGVSYNRFLRPYLIGASIVALIMLVMAMFIVPNASIGYNEFKFKYLK 120 Query: 139 ALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI--YYAQSGSIDL 196 + N+F +L++ +I + ++P F + + A S Sbjct: 121 KGKQDRVTSNIFNQLNESDFIYVKSFDPARQNANQFTFERFNEDNTLDFKISANSIRWIE 180 Query: 197 DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPN 256 L + + S I + + + + A +NL L N Sbjct: 181 KDSTYRLTKYKKRKMVGDSAIIETKNRLDTLFTFKIDDLTPVSYIAETKNLFELNRFIEN 240 Query: 257 NPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISF 316 + Y ++R L I +I++ ++ R+ + + ++F Sbjct: 241 QRRKGASNINNYVLVKYRRWALPLTAFILTIIAVAV---SSVKRRGGMGINLAFGIGVAF 297 Query: 317 GVFW---GFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + F + + +P I+ +F + + +LL K+ Sbjct: 298 IYIFFDKVFGTLAEQAGFSPLLAVIIPNVVFGVLAFYLLQNAKR 341 >gi|22124660|ref|NP_668083.1| hypothetical protein y0747 [Yersinia pestis KIM 10] gi|45440496|ref|NP_992035.1| hypothetical protein YP_0644 [Yersinia pestis biovar Microtus str. 91001] gi|51594884|ref|YP_069075.1| membrane protein, permease [Yersinia pseudotuberculosis IP 32953] gi|108808932|ref|YP_652848.1| hypothetical protein YPA_2941 [Yersinia pestis Antiqua] gi|108810813|ref|YP_646580.1| hypothetical protein YPN_0648 [Yersinia pestis Nepal516] gi|145600504|ref|YP_001164580.1| hypothetical protein YPDSF_3250 [Yersinia pestis Pestoides F] gi|153948230|ref|YP_001402496.1| permease [Yersinia pseudotuberculosis IP 31758] gi|153997518|ref|ZP_02022618.1| putative membrane protein [Yersinia pestis CA88-4125] gi|162420063|ref|YP_001608339.1| hypothetical protein YpAngola_A4048 [Yersinia pestis Angola] gi|165925825|ref|ZP_02221657.1| putative permease [Yersinia pestis biovar Orientalis str. F1991016] gi|165936618|ref|ZP_02225185.1| putative permease [Yersinia pestis biovar Orientalis str. IP275] gi|166010128|ref|ZP_02231026.1| putative permease [Yersinia pestis biovar Antiqua str. E1979001] gi|166214282|ref|ZP_02240317.1| putative permease [Yersinia pestis biovar Antiqua str. B42003004] gi|167398727|ref|ZP_02304251.1| putative permease [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420598|ref|ZP_02312351.1| putative permease [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423158|ref|ZP_02314911.1| putative permease [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170025893|ref|YP_001722398.1| permease YjgP/YjgQ family protein [Yersinia pseudotuberculosis YPIII] gi|186893894|ref|YP_001871006.1| permease YjgP/YjgQ family protein [Yersinia pseudotuberculosis PB1/+] gi|218930456|ref|YP_002348331.1| hypothetical protein YPO3440 [Yersinia pestis CO92] gi|229839084|ref|ZP_04459243.1| conserved inner membrane protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229896572|ref|ZP_04511739.1| conserved inner membrane protein [Yersinia pestis Pestoides A] gi|229899647|ref|ZP_04514788.1| conserved inner membrane protein [Yersinia pestis biovar Orientalis str. India 195] gi|229901016|ref|ZP_04516140.1| conserved inner membrane protein [Yersinia pestis Nepal516] gi|270489196|ref|ZP_06206270.1| inner membrane family protein [Yersinia pestis KIM D27] gi|294505144|ref|YP_003569206.1| hypothetical protein YPZ3_3035 [Yersinia pestis Z176003] gi|21957469|gb|AAM84334.1|AE013676_7 hypothetical protein y0747 [Yersinia pestis KIM 10] gi|45435353|gb|AAS60912.1| putative membrane protein [Yersinia pestis biovar Microtus str. 91001] gi|51588166|emb|CAH19772.1| putative membrane protein, permease [Yersinia pseudotuberculosis IP 32953] gi|108774461|gb|ABG16980.1| membrane protein [Yersinia pestis Nepal516] gi|108780845|gb|ABG14903.1| putative membrane protein [Yersinia pestis Antiqua] gi|115349067|emb|CAL22029.1| putative membrane protein [Yersinia pestis CO92] gi|145212200|gb|ABP41607.1| membrane protein [Yersinia pestis Pestoides F] gi|149289155|gb|EDM39235.1| putative membrane protein [Yersinia pestis CA88-4125] gi|152959725|gb|ABS47186.1| putative permease [Yersinia pseudotuberculosis IP 31758] gi|162352878|gb|ABX86826.1| putative permease [Yersinia pestis Angola] gi|165915267|gb|EDR33877.1| putative permease [Yersinia pestis biovar Orientalis str. IP275] gi|165922437|gb|EDR39614.1| putative permease [Yersinia pestis biovar Orientalis str. F1991016] gi|165991035|gb|EDR43336.1| putative permease [Yersinia pestis biovar Antiqua str. E1979001] gi|166204514|gb|EDR48994.1| putative permease [Yersinia pestis biovar Antiqua str. B42003004] gi|166961404|gb|EDR57425.1| putative permease [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051231|gb|EDR62639.1| putative permease [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057328|gb|EDR67074.1| putative permease [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169752427|gb|ACA69945.1| permease YjgP/YjgQ family protein [Yersinia pseudotuberculosis YPIII] gi|186696920|gb|ACC87549.1| permease YjgP/YjgQ family protein [Yersinia pseudotuberculosis PB1/+] gi|229682355|gb|EEO78447.1| conserved inner membrane protein [Yersinia pestis Nepal516] gi|229687139|gb|EEO79214.1| conserved inner membrane protein [Yersinia pestis biovar Orientalis str. India 195] gi|229695450|gb|EEO85497.1| conserved inner membrane protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700350|gb|EEO88382.1| conserved inner membrane protein [Yersinia pestis Pestoides A] gi|262367137|gb|ACY63694.1| hypothetical protein YPD8_3022 [Yersinia pestis D182038] gi|270337700|gb|EFA48477.1| inner membrane family protein [Yersinia pestis KIM D27] gi|294355603|gb|ADE65944.1| hypothetical protein YPZ3_3035 [Yersinia pestis Z176003] Length = 364 Score = 92.4 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 54/361 (14%), Positives = 125/361 (34%), Gaps = 19/361 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFSQKLVRILGAAVDGEIPTNVVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ +++ G + +LI L LA+ S I+ + Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMNACGMGKKSLIMAALILALFTSGLAAINTIWLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + A+ + + L F +D +F+ R Sbjct: 122 PWSSKHQDVVLNDAKANPSLAALGGGQFKSSNDGNSALFIGNVAGKEFNRVFLAQLRPNG 181 Query: 183 THK-----IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + Q +ILN G + + + +D I F Y Sbjct: 182 NQRPSVVVADSGHMSELPDGSQMVILNKGTRYEGTALLRDFRITDFVDYQAVIGHKQVQQ 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 A+ ++ L + R+EFH RLT + VI L+ Sbjct: 242 SSNGADQMSMKELWRSQEPDA----------RAEFHWRLTLIVSVVIMALL---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ ++ + ++ + F S + K N P+++++ + + L +I Sbjct: 289 VNPRQGRVLSMLPAMLLYLIFFLLQSSLRSKAG-NGQLDPLVWMWAVNGAYLALAIILNL 347 Query: 358 Y 358 + Sbjct: 348 W 348 >gi|218885479|ref|YP_002434800.1| permease YjgP/YjgQ family protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756433|gb|ACL07332.1| permease YjgP/YjgQ family protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 361 Score = 92.4 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 43/359 (11%), Positives = 112/359 (31%), Gaps = 8/359 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+ R L + + + + R++ + SL++ P + Sbjct: 1 MSLLARYLFRNNLMLILPTLAIGTGLYILSDLFDRLDDFLEAGVSLSVAAWYFVAKTPLI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P F + T + L M+R EL+ + G S + + ++ ++ + Sbjct: 61 ISQILPAVFLLATLSQLCLMSRGRELIALQAGGISMGRIARVLVLCGLVWGGLQLGFSQV 120 Query: 121 IEPKCR-STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + + S + + N++F + T +G+ + Sbjct: 121 LGVSGEVEAARIWSEDVRGKTEATATLRNVWFTDGAYVVSLAEVVPAQGTGRGLAAYELS 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 D + ++ + ++ L+ S ++ + Sbjct: 181 DDGLSILRVVRAATFTAGQRQWELHGVTEFDPSGYLSTRHDSLTLPLRQDVQAFLITARN 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + L L + + + +E R+ +H +L V+ + A + Sbjct: 241 ADPSRLPLWQLGDA-IDRLSASGSNVEGVRTAWHMKLAYAASLVV-----MAAVAAAIVT 294 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + I +SL I+F + F + + Q P L + + + +++ + Sbjct: 295 WRDNIYLGIGLSLIITFLFYTMF-TVGGTLGQKGIVSPPLAAWGSNALILAVALLRLAW 352 >gi|24213174|ref|NP_710655.1| permease [Leptospira interrogans serovar Lai str. 56601] gi|45656313|ref|YP_000399.1| hypothetical protein LIC10413 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24193889|gb|AAN47673.1| permease [Leptospira interrogans serovar Lai str. 56601] gi|45599547|gb|AAS69036.1| conserved hypothetical protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 386 Score = 92.4 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 39/364 (10%), Positives = 110/364 (30%), Gaps = 13/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 ++ + Y+ + F+ + + + I + + + +++ + Y IP + Sbjct: 25 LRILDKYLFGEFFKIFIGTVILLTGIMLLSLVNDNLRNFTATKAPRYHVALFLVYSIPKI 84 Query: 61 LPM-VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + V + + N EL+ + G S ++ P++ IL+ I + ++ Sbjct: 85 ISTTVVSMSLMFSICFTVGQFSVNKELVSMMAAGVSFFRIVTPLILFGILMWIIMLLATE 144 Query: 120 IIEPKCRSTIKQLSAKAQLAL---TFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 +I K + S + ++ + +I Sbjct: 145 LIVRPVNKLAKIEHDTLTEGMGTLANSVYQFHVKGKEGFYYLYFYDPDKDEINGGFNYIR 204 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS- 235 D + + + + + + E K S ++ + S Sbjct: 205 LRPDGSPETVISSLKAKYNYETKLWKMKKVEEWHFDNDLKLSSQETYEEKEYELPEEPSY 264 Query: 236 -STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + NL L + +E H + +I LI +A Sbjct: 265 FKVPAGSVEEMNLFQLKEEEKRR-IQKGLAYGDVLTEKHSVFALPMMTIIVTLIGTIA-- 321 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI--LYLFLFCISSIFLL 352 ++ + + I++ + +++ F+ + +N P +++ + Sbjct: 322 -GYFTKKTAGVASLGITIGVV-LIYYIFNSAGKSLGENGVIPPFAGVWITPSLFLGLCFW 379 Query: 353 MIKK 356 M ++ Sbjct: 380 MFRR 383 >gi|87310838|ref|ZP_01092964.1| hypothetical protein DSM3645_18031 [Blastopirellula marina DSM 3645] gi|87286353|gb|EAQ78261.1| hypothetical protein DSM3645_18031 [Blastopirellula marina DSM 3645] Length = 389 Score = 92.4 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 57/393 (14%), Positives = 118/393 (30%), Gaps = 39/393 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ YIL I + F ++ + + ++ ++Q+ + +I Y+IP Sbjct: 1 MRIITRYILWEILKIFFLALGALTLLIVLVGVVQQ---ALREGLGPGPIARIIPYMIPDA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + +V + EL + G S + + P +A++LSI +I Sbjct: 58 LRFSIPGTILFASCSVYGRLASGNELAALKAAGVSPLAALWPGYAIALVLSIACVWLNDI 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 S + + D L I + + + ++ + + Sbjct: 118 GVSWG-SQGVRRVLVQSFEEIAYGMLRTHKSFSSDKLSILVREVDGRRLMRPQIVAAATP 176 Query: 181 TQTHKIYYAQSGSIDLDRQAIIL---------NDGEVHRKSPISKDISIMKFKSYTLQTE 231 T + A + D ++ +DG + + S L E Sbjct: 177 TSPQLLISAAEAELHSDENHQLIISLIDSRIESDGSQQGVFEHPGRMDHVVSLSDELSPE 236 Query: 232 SANSSTIVLKANDQNLSFLL--------------------------NPNPNNPNYRPELL 265 + S I+ Q L P + +Y + Sbjct: 237 HRSPSKILSSRIPQVLREERQIVQTQKEADIAWSAFAQIATLDAAQRTPPFDISYINSQI 296 Query: 266 ETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYI 325 R+E +R + F L+ + A K+ F+ + + F F+ Sbjct: 297 NRLRTEPWRRWANGFSCLFFVLLGVPLAIKQRNPDFVTSFFMAFLPVLLVFYPLLAFAVD 356 Query: 326 IHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 K P + + S++ L + +Y Sbjct: 357 RAKDGAVPPQAVWIGNVALLLVSLYYLRMVWRY 389 >gi|85060086|ref|YP_455788.1| putative transport protein [Sodalis glossinidius str. 'morsitans'] gi|84780606|dbj|BAE75383.1| putative transport protein [Sodalis glossinidius str. 'morsitans'] Length = 366 Score = 92.4 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 49/361 (13%), Positives = 133/361 (36%), Gaps = 19/361 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IITRYLVRETFKSQLAILFILLLIFFCQKLVRILGAAVDGDIPTNLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P M L+ M +E+ ++ G + LI+ L L+++ +I ++ + Sbjct: 62 LILPLSLFMGLLMTLSRMYTESEITVMHACGLGKSILIRAALLLSLITAILAVVNVVWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + ++A+ + + L E F ++ + + + +F+ + Sbjct: 122 PWSSRHQDLVMSEAKANPSMAALVEGQFKPAENGNSVLFVGNVKDKGFEHVFLAQLKPNG 181 Query: 183 T--HKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A G + Q ++L+ G + + + +D I F Y + Sbjct: 182 NARPSVVIADRGHMSQRPDGSQLVMLDKGTRYEGTALLRDFRITDFTQYQAVIGRRAVAV 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 A +L L R+E H R T + +I ++ Sbjct: 242 DGTDAEQMSLRQLWR----------SPEPEARAELHWRFTLVVSVLIMAMM---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ ++ + ++ + F + + + P+L+++L ++ + L ++ Sbjct: 289 VNPRQGRVLSMLPAMLLYLIFFLLQTSLRSNGAK-GKLDPMLWMWLTNVAYLALALVLNL 347 Query: 358 Y 358 + Sbjct: 348 W 348 >gi|296125361|ref|YP_003632613.1| permease YjgP/YjgQ family protein [Brachyspira murdochii DSM 12563] gi|296017177|gb|ADG70414.1| permease YjgP/YjgQ family protein [Brachyspira murdochii DSM 12563] Length = 417 Score = 92.4 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 50/416 (12%), Positives = 123/416 (29%), Gaps = 62/416 (14%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YI+ FL LF F+ + + + I L+ ++ L + L+ Y++P Sbjct: 1 MKKITKYIILETIGPFLAGILFFTFVFVIQLLPELIRLIMNNGAPLLMSLETFVYMLPFN 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P M + ++ + E++++ G + + P++ L +F N+ Sbjct: 61 IAITIPMSILMASIIGYGRLSSDNEIIVMRALGFPHMRIYMPIIILGFFTFMFSLFFNNV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I + + L + + + F + D + +KY + ++ + I D Sbjct: 121 IMSESNYRYRALISYMVNIRPSIAVGKLEFTEISDMGFSIGAKYADDKSISNVVIYDKS- 179 Query: 181 TQTHKIYYAQSGSIDLDRQAI-----ILNDGEVHRK-SPISKDISIMKFKSYTLQT--ES 232 T ++ A+ G + L DG V + F S + Sbjct: 180 -DTKRVITAKYGLWKNNEANSQVVTLTLYDGVVQEMPNYGFVTNDYTVFDSMDINIIRNV 238 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLET------------------------- 267 + ++ + +L + + ++ Sbjct: 239 STLTSHERGLREMPSWEILKKIKEAKSNANKSVDEQITGMINNSYNNVKNTGIDITSFSN 298 Query: 268 -------------------------YRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 Y EF+K ++ + LI + Sbjct: 299 EYIKTNSAELVSIREKAIEESVPYFYYVEFYKFISIPAACLFMVLIGAPLGIVGKRSGKG 358 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 I + I + + + + P ++ ++ + + + + Sbjct: 359 FGFGISVIVVVIYYLLITAAELLAGGKKVPPILA--MWFPNIVLAIMGGFFMVRSF 412 >gi|261749332|ref|YP_003257017.1| hypothetical protein BPLAN_247 [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497424|gb|ACX83874.1| conserved hypothetical protein [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 361 Score = 92.4 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 46/365 (12%), Positives = 116/365 (31%), Gaps = 13/365 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILL-KISGYLIPT 59 MK + YI+R I +F+ + + I+ +I + QR++ + ++ S+ L + Sbjct: 1 MKILDRYIIRNILVTFIFITILLQIISVIIDLSQRMHRLENNQGSIKDALIYYYPFWSIW 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + +N+++E+ I +G S + P L A L+ + I Sbjct: 61 LAYTFSPISVFLSIIFFTSRLNKHSEINAILASGISFKRITIPYLISASLIGMGALIINY 120 Query: 120 IIEPKCRS---TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 P + + + ++ ++ Y+ I ++ + I Sbjct: 121 SFLPLANKMKNKFHYQYLLSSRYKNKYENNQTISTQISNNEYLFIRNFSRKKNIGQDCIY 180 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQA-IILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + + IL++ + K Sbjct: 181 QKFNGNKLIYLLKAKNIFWYKKHRIYILSNYSETYLNKNKDIFFKGVHKIQNFSMTPEEL 240 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 A +S L + T+ +E+++R + I L+ + Sbjct: 241 LPEEYIAETMTISELRKFIDREKKRGNSNINTHLNEYYQRTSYPFSNFILTLLGLSI--- 297 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN---PYYIPILYLFLFCISSIFLL 352 ++ + H + + ++F + ++ Y L +F + + FL Sbjct: 298 --SSKKGEPAHNFIMGIILAFIYIFCTEISKVYSTKDYIPSYLSVWLPNGIFGMITFFLY 355 Query: 353 MIKKK 357 + + Sbjct: 356 WNRNR 360 >gi|300703336|ref|YP_003744938.1| permease [Ralstonia solanacearum CFBP2957] gi|299070999|emb|CBJ42308.1| putative permease, predicted YjgP/YjgQ family [Ralstonia solanacearum CFBP2957] Length = 401 Score = 92.4 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 44/395 (11%), Positives = 114/395 (28%), Gaps = 41/395 (10%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M +E Y R I F+ ++ + +L + V +L PT Sbjct: 7 MPVYEKYFARQIYGVFVFILFAVLALFIFFDMLSELGSVVGRYTTLIAFFH-VMLQAPTR 65 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + V + M +E I G + + +A+ L++ ++ Sbjct: 66 VYEVIPVAALISAIYVFSQMASQSEFTIFRVAGLDTRGALLSLFKIALPLALVTYVFGEF 125 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-----------LYIKISKYNPNNT 169 I PK +++ +A A + ++ + ++ + P+ T Sbjct: 126 IGPKSEQFAQKVRLEALGATVSAEFRSGVWVKDRGPARPDGSGGEVTRFVNVGSLQPDQT 185 Query: 170 LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRK------------------ 211 ++ + I + + Q+ L+D Sbjct: 186 IRSLRIYEFDADYRLSSIRVAQQARYQGHQSWELDDVTETHFVEFPRKAGAAMPQDNRQA 245 Query: 212 SPISKDISIMKFKSYTLQTESANSS--------TIVLKANDQNLSFLLNPNPNNPNYRPE 263 P + D F+ + ++++ ++ + L + + Sbjct: 246 VPGAPDALAPDFRGEQTKLPKQEMRSELTPQILSVLMVTPERMATLDLFQYIRHLRDNKQ 305 Query: 264 LLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFS 323 + Y K++ ++ +++ A R +F + + + Sbjct: 306 DTQRYEIALWKKVVYPFTVLVMMALALPFAYL--HARAGAVGLKVFGGIMLGLSFQLVNN 363 Query: 324 YIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 H N + I + + + +I ++ Sbjct: 364 LFSHVGLLN-TWPAIFTAIVPGALYLAVALIALRW 397 >gi|167835784|ref|ZP_02462667.1| hypothetical protein Bpse38_04783 [Burkholderia thailandensis MSMB43] Length = 365 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 51/340 (15%), Positives = 119/340 (35%), Gaps = 18/340 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ I +++ + +S + +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTIMLTSMMIRIVGYAASGEVNPKDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M+ + VLT +++E+++ +G S LIKP+ A + I + + Sbjct: 62 MILVGTLFVSILFVLTRWYKDSEMVVWLASGVSLTRLIKPIGVFATPIVILIAFFAFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P K + A+ Q S L F + + + + + + + Q Sbjct: 122 PWSNQQSKLIKARFQQRDEVSLLAPGQFRESAANHRVFFIEKMSPDQAKVQNVFVTTTEQ 181 Query: 183 THKIY----YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + ++ + I+L +G + P + IM+F+ Y ++ +S + Sbjct: 182 GKVNVVVSQTGHTETMKNGDRFIVLENGRRYDGVPGQPNFKIMEFERYGVKIQSKQIVSQ 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 L NP N +EF R L + +++I A Sbjct: 242 PTTTGTSTPDLLRNPTNQNL-----------AEFAWRAGLPLIAINLMILAIPLAY---Q 287 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 +R + + +++ I + + ++E+ + Sbjct: 288 NPRRGRTVNLVMAVLIYLTYSNLLNVVQSQMERGKIAFGL 327 >gi|326316898|ref|YP_004234570.1| permease YjgP/YjgQ family protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373734|gb|ADX46003.1| permease YjgP/YjgQ family protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 365 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 40/365 (10%), Positives = 110/365 (30%), Gaps = 8/365 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPT 59 MK+ I R + L + + + ++ + V ++ L IP+ Sbjct: 1 MKTIRGLIYREALAAVGFVTLGFLALFFFFDMVDELRYVGRVQAYQMSHALLYVSLGIPS 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 L + P + T V+ +++E I+ +G ++ +L L + + F + Sbjct: 61 HLYELLPITVLIGTIFVMARFAQSSEFTIMRTSGLGPWRALRTLLVLGLGFVMLTFTVGD 120 Query: 120 IIEPKCRS-TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 + P + T + + D + + + + + + I + Sbjct: 121 YLAPATDRLAQLVRARYLGQITTGATGAWLKERQGDRSVAVNVRALRHDGGMSNVRIFEF 180 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + + + + + + + + S+ + Sbjct: 181 DGDGRLASTLQAAAGEFGTDAWELSDVKRSVFHRRGEAEAHVERLQESRFRWPTHISADM 240 Query: 239 VLK---ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 V D+ + L + + + Y EF +++ L ++ ++S+ A Sbjct: 241 VAASLLKPDRMATIDLFQYIRHLESNGQAAQKYEIEFWRKVFYPLSCLVMVVLSLPFAYL 300 Query: 296 RALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFL--FCISSIFLL 352 + ISF + F Y + +P+ + F Sbjct: 301 HFRSGGIAGYVFGGVMAGISFFLLNNVFGYAGNLQNWSPWLTAAAPGIIYSLLSLGAFGW 360 Query: 353 MIKKK 357 ++ ++ Sbjct: 361 LVLRR 365 >gi|282878370|ref|ZP_06287162.1| putative membrane protein [Prevotella buccalis ATCC 35310] gi|281299556|gb|EFA91933.1| putative membrane protein [Prevotella buccalis ATCC 35310] Length = 410 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 37/353 (10%), Positives = 103/353 (29%), Gaps = 4/353 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPTV 60 + + YI+R +++ S I+ IA V + ++ + I+ +P Sbjct: 51 RRIDWYIIRKFIGTYIYSIALIIAIAIVFDFNENLSKFTEYHAPARAIIFDYYANFVPYY 110 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +P + + + N+E++ + +G S L++P + +L++ + Sbjct: 111 SNLFSPLFVFIAVIFFTSKLAGNSEIIAMLASGISFKRLMRPYMLSCVLIASLSYYLSAS 170 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + + + + N G + + Sbjct: 171 VIPHGTVIRHNFESLYRNSRKQTAADNVQLQVGKGVIAYIQHYDNKTKRGYGFSLDKFEN 230 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + A D + + + + + + + +V Sbjct: 231 KKLVSHMTAMEIQYDTIADSKYHWNVTGWKIRQLKGLREHITSGADLDTLIQMEPTDLVY 290 Query: 241 KANDQNLS---FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 Q L + + + Y+ E+HKR+ I +I + ++ Sbjct: 291 SKGQQETFTSAELKDYISKQVDRGSSNVVQYQVEYHKRIASSFASFILTIIGFSLSARKR 350 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 + S+ + + P + +F + + F Sbjct: 351 KGGMGLYLGLGLALSSLYILLQTVSATFAINANAPPILAAWIPNIIFALVAYF 403 >gi|299065987|emb|CBJ37168.1| putative permease, predicted YjgP/YjgQ family [Ralstonia solanacearum CMR15] Length = 401 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 52/395 (13%), Positives = 117/395 (29%), Gaps = 41/395 (10%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I F+ ++ + +L + V +L PT Sbjct: 7 MQVYEKYFARQIYGVFVFILFAVLALFVFFDMLSELGSVVGRYTTLIAFFH-VMLQAPTR 65 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + V + M +E I G + + +A+ L++ +I Sbjct: 66 VYEVIPVAALISAIYVFSQMASQSEFTIFRVAGLDTRRALLSLFKIALPLALVTYIFGEF 125 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-----------LYIKISKYNPNNT 169 I PK +++ +A A S ++ + ++ + P+ T Sbjct: 126 IGPKSEQFAQKVRLEALGATVSSGFRSGVWVKDRGPARPDGSGGEVTRFVNVGTLQPDQT 185 Query: 170 LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKS----------------- 212 +QG+ I + + Q LND R Sbjct: 186 IQGLRIYEFDTDYRLSSIRVAQQARYQGHQHWELNDVTETRFIEFPRHAGGATPQDSKQA 245 Query: 213 -PISKDISIMKFKSYTLQTESANSS--------TIVLKANDQNLSFLLNPNPNNPNYRPE 263 P + D F+ + + ++++ D+ + L + + Sbjct: 246 VPGAPDALAPDFRGEQTRLPKQDMRSELTPQILSVLMVTPDRMATLDLFQYIRHLRDNKQ 305 Query: 264 LLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFS 323 + Y K++ ++ +S+ A R +F + + + Sbjct: 306 DTQRYEIALWKKVVYPFTVLVMMALSLPFAYL--HARAGAVGLKVFGGIMLGLSFQLVNN 363 Query: 324 YIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 H N + I L + + ++ ++ Sbjct: 364 LFSHVGLLN-TWPAIFTAILPGALYLAVALVALRW 397 >gi|85709345|ref|ZP_01040410.1| predicted permease [Erythrobacter sp. NAP1] gi|85688055|gb|EAQ28059.1| predicted permease [Erythrobacter sp. NAP1] Length = 365 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 52/355 (14%), Positives = 116/355 (32%), Gaps = 2/355 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTV 60 +S LY+ + L + +V + + +L + ++K + IP + Sbjct: 9 RSLTLYLAKMFVVRILAVLVMLVLVLMALDLLGSTGKILEPEGNGQAEIIKYASLRIPQL 68 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P+ + T L ++N+N+E++ + G S ++ P+L A ++++ F Sbjct: 69 IARFLPYSVLLATLITLVTLNQNSEVVAMKAAGLSAHQVLAPLLLTAAVVALISFAFNER 128 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + ST+K A + + D D + S + + V Sbjct: 129 VVTRANSTLKAWEAVEYGPIPEQSGVRANVYLTDGDNILTASSLIGSGEDIELDNVTWYS 188 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 I Q + A R S + + Sbjct: 189 RAPGGIISEQIKATGATYAAPGWRLENPKRFDVGSATTEPIDDVVVGEGLTPEQIDLQSV 248 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + Q+ L + + R+++ RL+ L ++ L+ VAA A Sbjct: 249 DPDAQSFWEL-SETIDAYEAAGRRTSEMRAKWWHRLSGPLSALLMPLLGSVAAFGLARSG 307 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 Q I ++L ++ V + + P ++ F + ++I+ Sbjct: 308 QLFVRAVIGMALGFAYFVVDNAALAMGSFGGYPPFLAAWAPFFLFLLVGETVLIR 362 >gi|325124204|gb|ADY83727.1| hypothetical protein BDGL_003141 [Acinetobacter calcoaceticus PHEA-2] Length = 350 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 52/339 (15%), Positives = 114/339 (33%), Gaps = 14/339 (4%) Query: 18 MSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVL 77 M + I ++++ + + +IL I GY +P L ++ P F + V Sbjct: 1 MVISLLTLIMMGGRLIKYFGVAAQGRLDASILFSIIGYRLPEFLTLILPLGFFIGLMLVF 60 Query: 78 TSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQ 137 + + E+ +++ +G SR L + ++ + ++ +F + + P ++L+ Sbjct: 61 GRLYVDHEMAVLNGSGVSRHQLARLLIPMTLVYMVFQSVLMLWMTPWGLREFEKLTTTQA 120 Query: 138 LALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLD 197 + F + F S L+ IF + + Sbjct: 121 VRTGFDLVRPREFISSGPYTIYAGSLSEDRKNLKDIFFYQRAAKEDKPDVMILAKEATRV 180 Query: 198 R------QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLL 251 + L G + P + +F+SY L+ E+ + + L Sbjct: 181 EVANDTANVVDLVQGRRYEIFPGQPKYTQAEFQSYRLRLENDKDVKFESGDVEALSTTKL 240 Query: 252 NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFIS 311 N+P RSE RL VI ++S+ ++ + ++ P Sbjct: 241 FSKTNDPV--------IRSELGWRLFGPFTIVIALMLSVALSEVSPRQGRYYRLIPAIFI 292 Query: 312 LSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 S + I K E + + P + + +++F Sbjct: 293 FSSLIVLMIAIKTRISKEELDIWAYPAVLVVYGVAAALF 331 >gi|148255227|ref|YP_001239812.1| putative permease [Bradyrhizobium sp. BTAi1] gi|146407400|gb|ABQ35906.1| putative permease [Bradyrhizobium sp. BTAi1] Length = 365 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 50/352 (14%), Positives = 109/352 (30%), Gaps = 11/352 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTV 60 + Y S + I + ++ ++ + S ++ S ++ + S + +P + Sbjct: 6 NTLGRYFAGRFLVSAVGVFASIFVLLVLVDYIEMVRKTSGLASASALMVAETSLFRVPQL 65 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + PFC + +++R EL++ G S I P L AI+L + N Sbjct: 66 LEKMMPFCVLIGAMTCYLALSRRLELVVARAAGVSAWQFIAPALASAIVLGLMATTLYNP 125 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + R K++ A+ A +++ F L+ N V Sbjct: 126 MSANLRELSKRMEAELFGAAPGGGVQDASGFWLNQ--INPDGSVIINAARSEQQGVRLTG 183 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL----QTESANSS 236 + + ++ + L DG+ KS + T A Sbjct: 184 LTLFRFDTEKHFKDRIEAREATLEDGQWVFKSVRRFSLDAPPVDEPTFILPTSLTPAQVR 243 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + + YR ++HK + Q +++ + Sbjct: 244 NSFSTPETVSFWQLPS-YIRSSESSGFATAGYRLQYHKLIAQPFLLAAMVMLAASVSL-- 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 R + + F ++ S + + + PI+ +L Sbjct: 301 RFFRMGGVQKMVLSGVGAGFLLY-VLSKVTEDLSKAALMDPIVAAWLPVFVG 351 >gi|329907053|ref|ZP_08274545.1| hypothetical protein IMCC9480_3108 [Oxalobacteraceae bacterium IMCC9480] gi|327547110|gb|EGF31984.1| hypothetical protein IMCC9480_3108 [Oxalobacteraceae bacterium IMCC9480] Length = 376 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 46/360 (12%), Positives = 127/360 (35%), Gaps = 18/360 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ + R + + + I + +++ + + + +L + G+ +P Sbjct: 2 IFQRALRRELISTAGAVFTTLFTITITVMLIKILGQAAGGKVASEDVLALIGFAALNYMP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + V+T +++E+++ +G S I VL + + + + + Sbjct: 62 VILILTTFISVLLVVTRSYQDSEMVVWFASGLSLTRWIPTVLSCGLPVVLVIALLSFYAT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRL-DDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + + + + + F + + + V++ Sbjct: 122 PWANRSSSEFRERFEKRADIAKVAPGKFQESASSNRVFFVEGVTGDAMNVRNVFVNTVRD 181 Query: 182 QTHKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 I ++ G + ++L++G + + +D +M+F+SY + SA + Sbjct: 182 GKSSIVVSKEGRTEVDANGDKFLVLSNGRRYEGTLDERDFQLMEFESYGVLISSAVPGLM 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 ++ + L NP+ N E RL+ L + L++I + Sbjct: 242 ADLSSRSMSTMALLANPDGFNQG---------ELLWRLSLPLMCLFLMLLAIPLGF---V 289 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN--PYYIPILYLFLFCISSIFLLMIKK 356 + + + I+L + S + + QN ++ + + ++ I LL + Sbjct: 290 NPRGGRSANLIIALLLFVFYSNMISLMQAAVAQNRLGVWLAWWPVHVLAMAVIALLFSWR 349 >gi|283833700|ref|ZP_06353441.1| permease YjgP/YjgQ [Citrobacter youngae ATCC 29220] gi|291071386|gb|EFE09495.1| permease YjgP/YjgQ [Citrobacter youngae ATCC 29220] Length = 356 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 63/360 (17%), Positives = 137/360 (38%), Gaps = 17/360 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ E YI+ + R + F++FI + + + ++ T +L +L I Y + Sbjct: 1 MRLIERYIMFEVSRLVAIIVGFLIFIFAIYSAQRYLTDAANGTLALTAVLAIVFYKVIIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L ++ +E+ + G+S + L K V++ AI L I + + Sbjct: 61 LEMLLPVGLYVSVGIALGQLHAESEITALLAAGSSPLRLYKTVMYFAIPLGILVTLLSMF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P I +L ++Q L S+L F D I + +P+ ++ + Sbjct: 121 GRPWAYMQIYRLEQQSQSELDISHLRARKFNVNDHGHMILAATISPDTGHLTDMLIYTPS 180 Query: 181 TQTHKIYYAQSGSIDLDRQ---AIILNDGEVHRKSPISKD-ISIMKFKSYTLQTESANSS 236 T ++ A G I ++ L+ G +R + + F+ +Q + + Sbjct: 181 ENTSSLFRAHCGDITNPSPLTPSVALHSGTSYRLDHHNGQGDNGQIFQRLNIQLKPLMQN 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 I + + + +P + +E R+++ + ++ L+++ R Sbjct: 241 PITRRKASSMTALRTSTDPGDT-----------AELQWRISRGINALLMALLAVSV--SR 287 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 RQ + I +SL + + G IP ++L + ++I + Sbjct: 288 VKPRQGRFSTLIPLSLLFTCIFYGGNVCRTLVANGALPVIPGVWLVQILMLFGVGMLIVR 347 >gi|113868947|ref|YP_727436.1| permease [Ralstonia eutropha H16] gi|113527723|emb|CAJ94068.1| predicted permease [Ralstonia eutropha H16] Length = 388 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 54/388 (13%), Positives = 124/388 (31%), Gaps = 34/388 (8%) Query: 1 MKSF---ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLI 57 MK E Y R + F ++ + +L + V ++ + + L Sbjct: 1 MKILRVYERYFGRLVYGVFAFILFAVLSLFVFFDMLNELENV-NNQYTSLVALFHVLLQA 59 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 PT + V P + V + + +E I G + + + LA+ L+I FI Sbjct: 60 PTRVYEVLPIAVLISAIYVFSQLASQSEYTIFRVAGLNTRQALFSLFKLAVPLAIVTFIF 119 Query: 118 ENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD----------LYIKISKYNPN 167 I P+ +++ +A A S ++ + D ++ ++ P+ Sbjct: 120 GEFIAPRAEQYAQKIKLEAIGATVSSGFRSGVWVKDRDKDAATGGGEITRFVNVAGLRPD 179 Query: 168 NTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSP-------------- 213 T+ GI + + ++ Q L R Sbjct: 180 QTITGITMYEFDPQYRLRMIRVAQEGRYQGGQLWELQGVNETRFIELASPAQGAKPARDS 239 Query: 214 --ISKDISIMKFKSYTLQTE-SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRS 270 +KF T+ +E + +++L ++ + L + + + Y Sbjct: 240 LAPDFRAEQVKFPRVTMHSELTPQILSVLLVTPERMSTLDLFRYIRHLRDNKQDTQRYEI 299 Query: 271 EFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIE 330 F K++ L + +++ A A I L +SF + + + Sbjct: 300 AFWKKVIYPLTLFVMMALALPFAYLHARAGAVGVKVFGGIMLGLSFHLSNTLFSHVGLLH 359 Query: 331 QNPYYIPILYLFLFCISSIFLLMIKKKY 358 + PI+ + + + ++ ++ Sbjct: 360 ---TWPPIISALVPGTLYLMVALLALRW 384 >gi|72382010|ref|YP_291365.1| putative permease [Prochlorococcus marinus str. NATL2A] gi|72001860|gb|AAZ57662.1| unclassified ABC-type transport system permease [Prochlorococcus marinus str. NATL2A] Length = 395 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 53/375 (14%), Positives = 125/375 (33%), Gaps = 20/375 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQ-ILQRINLVSSSTESLNILLKISGYLIPTVL 61 + +IL + S ++ + I I + ++ ++I +P+ + Sbjct: 24 LLDRWILFELLPPLFFSIAAFTVVSLSVGVIFDLIRKIVEIGLPFSVAIQILLLKLPSFV 83 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + T S+N N+E+ + + G S LI P L L+I +S FI N I Sbjct: 84 VISFPMAMLLSTLLAYGSLNDNSEIKALKSIGISVYRLILPGLILSIFMSYMTFIFNNNI 143 Query: 122 EPKCRSTIKQLSAKAQLALTFSYL-------------EENLFFRLDDDLYIKISKYNPNN 168 P + + A + + + ++ + ++ + + Sbjct: 144 VPSTNKNAEIILANSLGRSFANEQGEDIIFSKKGEILDPYSSYKKNGVTHLFYAWKFIDG 203 Query: 169 TLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 + + ++D ++ A+ G + D+ +G++ SP + + KF S+ Sbjct: 204 QMLDVTVIDFSKLGFTQMLKAKKGIWNSDKNNWEFFEGDILTLSPDGSN-TRTKFLSFLY 262 Query: 229 QTESA--NSSTIVLKANDQNLSFLLNPNP-NNPNYRPELLETYRSEFHKRLTQWLFPVIF 285 + N + + AND NL + + + +++T + +F Sbjct: 263 PLGTELTNIAQLPKDANDMNLGEANTAMKLYQSSGNIKEARRMKVRIQEKITLPIACSVF 322 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC 345 LI R + +S+ + + + Sbjct: 323 ALIGCSFGVM--QKRGGGRSQSFGLSIILILIYYILSFSFSSLGVKGIINPFFAAWSPVF 380 Query: 346 ISSIFLLMIKKKYTK 360 +S + + K+ +K Sbjct: 381 LSMLGGGFLLKQASK 395 >gi|187929751|ref|YP_001900238.1| permease YjgP/YjgQ family protein [Ralstonia pickettii 12J] gi|309781533|ref|ZP_07676269.1| membrane protein [Ralstonia sp. 5_7_47FAA] gi|187726641|gb|ACD27806.1| permease YjgP/YjgQ family protein [Ralstonia pickettii 12J] gi|308919946|gb|EFP65607.1| membrane protein [Ralstonia sp. 5_7_47FAA] Length = 372 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 47/363 (12%), Positives = 119/363 (32%), Gaps = 18/363 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + L ++ +++ + + ++ + N +L + G L Sbjct: 2 IFEQALRRELSFTAGAVFLVLLTFMLTTLVIRILGMAANGEANPNDVLLLIGLATLGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT +++E+++ +G S I+PVL ++ + + + Sbjct: 62 ILLCATLFISVLLVLTRWYKDSEMVVWFTSGISLTDFIRPVLRFSLPFIVLVALLALFGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + + S + F Y+ + + + + Q Sbjct: 122 PWANQQSALFRDRFEQRDVLSMISAGRFIEPAHGNYVLFIEGVDSGMKHARNLFVANAEQ 181 Query: 183 THKIY----YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + ++ + ++L+ G + +P D I++F Y ++ + Sbjct: 182 DKIGVAVAKTGEFKTMPNGDRFVVLDKGRRYEGTPGKLDYRIVEFDKYGVKVANKPPQAD 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + L +P N E R+ L + F LI+I A + Sbjct: 242 ANLPTKSRSTKDLLADPTPENLG---------ELVWRIGLPLLALNFVLIAIPLAY---V 289 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMIKK 356 + + P+ ++ I + + + ++ + L LL + Sbjct: 290 NPRLGRYTPMIFAVLIYLTYSNLLNLSQAWVSQGKMNVFMAWWPIHLAAFICAVLLFRFR 349 Query: 357 KYT 359 Y+ Sbjct: 350 HYS 352 >gi|300870020|ref|YP_003784891.1| putative permease [Brachyspira pilosicoli 95/1000] gi|300687719|gb|ADK30390.1| putative permease, YjgP/YjgQ family [Brachyspira pilosicoli 95/1000] Length = 356 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 50/353 (14%), Positives = 114/353 (32%), Gaps = 2/353 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+L+ F+ S + V + + + +++ + E++ + P Sbjct: 1 MKKLNSYLLKEFLSMFVGSLILFVILVTIADLSSKLSYYTEHPENMKYFITYHAARTPHN 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P +T VL + +N E+L + N+G S P+ + I L + L Sbjct: 61 LYYLFPIALMFSSTYVLGTFVKNKEMLAVQNSGISLFKFSSPIFIIVIALCLGLIGFWQF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + + + Y F ++ +Y + +N L IV ++ Sbjct: 121 VAAPMNKISFEANDLGRGHKKGEYTGSLNIFGANNYIYFIENFNFNDNYLTNTVIVKLKE 180 Query: 181 TQ-THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + S + + + G + + K+IS+ + +Y L + Sbjct: 181 DGAIDMRISSPSVRWNDNEKKWYAETGILAEFT-DKKNISVKEITNYPLDVLERPEHFMN 239 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 A D T ++FH R++ I L++ + + Sbjct: 240 RPALDSMSLTEEMHWIKLRKEVNLNTNTLETDFHYRISYCFSGFIIVLLASLFSKFSTQS 299 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 + + + + + + F + NP+ + +F Sbjct: 300 VLVVSLVMVIMVALVYYSILMMFRSMGDGGNMNPFIAAWMPNIIFAGLCFLAF 352 >gi|149371725|ref|ZP_01891141.1| hypothetical protein SCB49_09980 [unidentified eubacterium SCB49] gi|149355352|gb|EDM43912.1| hypothetical protein SCB49_09980 [unidentified eubacterium SCB49] Length = 338 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 41/341 (12%), Positives = 104/341 (30%), Gaps = 6/341 (1%) Query: 20 CLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTS 79 L + I + + ++I+ + + N + ++ P + + Sbjct: 1 MLLFIPIGITVHLAEKIDKILDNEVPFNAVAIYFLEFTVYFANLLFPLFLFLSVIWFTSK 60 Query: 80 MNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLA 139 + NTE++ ++G S ++P + A ++ + + P + + + K + Sbjct: 61 LANNTEVIAFLSSGVSYYRFLRPFMIGATIIFVLGLGLTLYLAPLASTGYNEFTYKYLVR 120 Query: 140 LTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQ 199 D+D +N+ + + + A + Sbjct: 121 KKDRDKGNIFRQINDNDYIYVSYFNTLDNSGSHFTLEHFEEEKLVYKISANRIRYNEKDS 180 Query: 200 AIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPN 259 L + + T + + + + A N S L + Sbjct: 181 TYTLQSYKKRTIGVNDDILESRASLDTTFSFKLEDLTPVKYIAETLNYSKLNSYIEQEKE 240 Query: 260 YRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVF 319 + Y E +KR + I +I++ ++ R+ + I + I Sbjct: 241 RGSSYINRYVLEKYKRFSIPFSVFILTIIAVSV---SSVKRRGGMGANLAIGIGIGMIFV 297 Query: 320 W---GFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + F + + + +P +F I +I+LL K+ Sbjct: 298 FFDKIFGTLAQQSDFSPLVATWFPNVIFAILAIYLLRNAKR 338 >gi|183219955|ref|YP_001837951.1| hypothetical protein LEPBI_I0537 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910079|ref|YP_001961634.1| permease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167774755|gb|ABZ93056.1| Permease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778377|gb|ABZ96675.1| Conserved hypothetical protein; putative membrane protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 378 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 40/361 (11%), Positives = 119/361 (32%), Gaps = 10/361 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 ++ + Y+ ++F+ + + + + + + + + SS + + + Y +P+++ Sbjct: 19 RTLDRYLFFDFFKTFIGTLIMLTSMIVIYKFTDVMKYLVSSKVNQSHVYLHVLYSLPSMV 78 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 V V+ + N EL+ + G S + +I P+LF I++ + + + I+ Sbjct: 79 DQVVAPALMFSVCFVIGQFSVNKELVAMMVAGVSFMRIITPILFFGIVIWLVMTLFGQIV 138 Query: 122 EPKCRSTIKQLSAKA---QLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 + + L + ++ + I + + + Sbjct: 139 VIPANKNAQIQFSIMAKGSNRLIDFVYQLHIKGKKGFYYVYWIDEKENTIKGGFNYFEIT 198 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--S 236 D +Q + +L D E R + + +S K+ T + S Sbjct: 199 PDGYPTYTVSSQKAKFIPSPHSWVLYDAEEVRFNENLELVSRTKYAEKTYDFPEDLAYFS 258 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + N L + + + + H + L + + A Sbjct: 259 KPIRNPEEMNFFELADE-IQSRITKGIPFRNVIVQQHMAFSMPLMSFVVVTLG---ALAG 314 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP-YYIPILYLFLFCISSIFLLMIK 355 A+ ++ + + +++++ + S E +++ ++ + + Sbjct: 315 AITKRSAGVASLGLTIAVVLLYYILNSTAKTLAENGALPIWIGMWITPVIFTTAAYYLYR 374 Query: 356 K 356 K Sbjct: 375 K 375 >gi|124267132|ref|YP_001021136.1| putative transmembrane protein [Methylibium petroleiphilum PM1] gi|124259907|gb|ABM94901.1| putative transmembrane protein [Methylibium petroleiphilum PM1] Length = 363 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 54/362 (14%), Positives = 134/362 (37%), Gaps = 15/362 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ + R + RSF + + I+ I + +++ + + + + + + GY+ LP Sbjct: 2 LFDSTLRRDLARSFGATLVVIMTIVITMFLIRTLGQAAGGSVAAQDVALLLGYVALENLP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + + LT M R++E++I +G + + PVL L L + + + + Sbjct: 62 TILSLSLFIAVVTTLTRMYRDSEMVIWFASGVGLLRFVPPVLRLTAPLLLLVALLALFVW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRL-DDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P I +L + Q + + F D I + + V R Sbjct: 122 PWGNRQIAELKDRYQRRSDVARVAPGQFQSSADGKRTFFIERDTGEGNIARNVFVLERKP 181 Query: 182 QTHKIYYAQSGSIDLDR--QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA-NSSTI 238 + + A++G I++D + ++L G+ + + + + + +F SY + A +S Sbjct: 182 DSESVTSARTGRIEMDGDQRFVVLESGQRNDINLATGERKLAQFDSYRVLAGEAVSSGAD 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 L ++ LL + + E R+ + + L+ I A Sbjct: 242 NLPPKARSTWDLLT----------QPSNRHFGELAWRIGLAVGGINLVLLGIGLAGGNPR 291 Query: 299 VRQRKKIHPIFISLSISF-GVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ + F + +++ + + +++ F ++ L ++ Sbjct: 292 RAGSWNLLFALLAFVVYFNLLNLSQAWVASGKLEIGIVLLLIHGGSFVLAVSLLWWRERG 351 Query: 358 YT 359 + Sbjct: 352 AS 353 >gi|283833699|ref|ZP_06353440.1| putative permease [Citrobacter youngae ATCC 29220] gi|291071385|gb|EFE09494.1| putative permease [Citrobacter youngae ATCC 29220] Length = 360 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 44/362 (12%), Positives = 123/362 (33%), Gaps = 6/362 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNIFSRYLIRYVFIGFAAAAGILLPLFTTFNLINELDDVSPGGYRWPQAVIVVLMTLPRN 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++ EL I +TG S + L +++ L +++ Sbjct: 61 LIDLSPFIALLGGIAGLGHLSKTMELTAIRSTGLSIFKIAMITLTAGVMIIALLAVTDEW 120 Query: 121 IEPK-CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 I + ++ + + + N+ + D + I + N GI I R Sbjct: 121 IAAPLQQHALRIRTTAMAQDPNADHQKNNMLWARRGDAFATIKSLDAKNQPVGIEIFHYR 180 Query: 180 DT-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 YA+ G + + + +G ++ ++ + + + + + + Sbjct: 181 PDLSLETYIYAEKGRVLKNGTWTL--EGVYEKRWLDGRETTEVHKQQQWKSIFTRINLEM 238 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + L + + +R ++L + L + L++I ++ Sbjct: 239 LTMPAGSFSIKQLRSYISYLQDTGQPSIEFRVALWQKLGRPLLTLAMMLLAIPFTF--SI 296 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 R + + + + + I++ + + L I L++ ++ Sbjct: 297 PRSPGIGSRLAMGVIVGLLTYISDQIIVNIGILFDLQVQLTVLCPPVALLIIALILVSRF 356 Query: 359 TK 360 + Sbjct: 357 NR 358 >gi|300718281|ref|YP_003743084.1| permease [Erwinia billingiae Eb661] gi|299064117|emb|CAX61237.1| Putative permease [Erwinia billingiae Eb661] Length = 356 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 61/370 (16%), Positives = 140/370 (37%), Gaps = 24/370 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E YI I R ++ F+V + + + ++ T +L ++ + Y + Sbjct: 1 MSLIERYITVEIRRLVMVIVGFLVVMFASYSAQRYLTDAANGTLALQVVFDVVCYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + T L + ++E+ I G S + L K VLFLAI L++ + + Sbjct: 61 LEMLLPVGLYVATAVALGQLYTDSEITAIFAAGASPVRLYKAVLFLAIPLAVVVTLLSLY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P I +L ++Q L S+L+ N F + S+ +P + ++ SR Sbjct: 121 GRPWAYGNIYRLEQQSQSVLDVSHLQANKFNVNGSGRMVMASRIDPASHQLTDALIYSRS 180 Query: 181 TQTHKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + +Y A S + ++ L +G + ++ + S + + S Sbjct: 181 GKNTNLYRAHSVVVTDPSPATPSVNLRNGTAYVLDREGAQDNMQHYHSLNIALKPFIESQ 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 V + + + +P + ++E R ++ L ++ L++I Sbjct: 241 EVRRKSAPVADLWCSSDPAD-----------KAELQWRESRGLSTLLMVLLAIPL---SR 286 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFL---- 351 ++ + + + +F+G + + P + + L ++ + Sbjct: 287 TKPRQGRYATLLPLTLLFTAIFYGGNVCRTLVANGSLPAIPGVWLVPLVMLTGLAFCLAR 346 Query: 352 -LMIKKKYTK 360 + +K+++ Sbjct: 347 DFSLLRKFSR 356 >gi|319793491|ref|YP_004155131.1| permease yjgp/yjgq family protein [Variovorax paradoxus EPS] gi|315595954|gb|ADU37020.1| permease YjgP/YjgQ family protein [Variovorax paradoxus EPS] Length = 379 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 51/358 (14%), Positives = 129/358 (36%), Gaps = 14/358 (3%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 + + + RSF + + +V I + +++ + L S + + + + Y + +P + Sbjct: 7 LRKELSRSFGATLVVLVTIVMTMMLIRTLGLASKGSVNPQEVFLVMAYTVLGYMPTILSL 66 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 + L+ M R++E++I ++G ++P+ A + I + + + P S Sbjct: 67 SLFIAIVGTLSRMYRDSEMVIWFSSGRGLADFVEPLFRFAWPVLILIAVMALVGWPWANS 126 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 + + + + F + I K P+ + + + Sbjct: 127 QTMGMRQQYEQRSDIERVTPGEFRESSGRMRVFFIDKDTPDGATATNVFIWAIERGLQIT 186 Query: 187 YYAQSGSIDLDRQAIILNDGEVHRKSPI---SKDISIMKFKSYTLQTESANSSTIVLKAN 243 A+SG I+ L R + + I +FK+Y + ++ +T Sbjct: 187 TSARSGRIEDVGPNRFLMLSNGQRLERPLLPTSGLKISEFKTYGTRAGGSSDATANTTPP 246 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI-VAADKRALVRQR 302 + L + + E R+ L + F L+++ V++ + R Sbjct: 247 RARTTLSLLRDRSTAALG---------ELGWRIGMLLAAINFVLLALTVSSVNPRVGRSG 297 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + +F + + G S+I ++ +L+ +F I+ +L + + + Sbjct: 298 NLLFALFAFVIYYNLLNLGQSWISSGRYGMGTFMLLLHGGVFLIAVAWLGLRNNNWAR 355 >gi|300690718|ref|YP_003751713.1| permease, predicted YjgP/YjgQ family [Ralstonia solanacearum PSI07] gi|299077778|emb|CBJ50416.1| putative permease, predicted YjgP/YjgQ family [Ralstonia solanacearum PSI07] Length = 398 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 44/396 (11%), Positives = 111/396 (28%), Gaps = 43/396 (10%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M +E Y R I F+ ++ + +L + V +L PT Sbjct: 4 MPVYEKYFARQIYGVFVFILFAVLALFIFFDMLSELGSVVGRYTTLIAFFH-VMLQAPTR 62 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + V + M +E I G + + +A+ L++ ++ Sbjct: 63 VYEVIPVAALISAIYVFSQMASQSEFTIFRVAGLDTRRALLSLFKIALPLALVTYVFGEF 122 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-----------LYIKISKYNPNNT 169 I PK +++ +A A + ++ + ++ + P+ T Sbjct: 123 IGPKSEQFAQKVRLEALGATVSAEFRSGVWVKDRGPARPDGSGGEVTRFVNVGSLQPDQT 182 Query: 170 LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKS----------------- 212 ++ + + + + Q LND R Sbjct: 183 IRNLRVYEFDADYRLSSIRVAQQASYQGHQRWELNDVTETRFIEFPRQAGAATPQDSKQA 242 Query: 213 ----------PISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRP 262 + + + + + S +++ + L + Sbjct: 243 VPGAPDALAPDFRGEQTKLPKQEMRSELTPQILSVLMVTPDRMATLDLFQ-YIRHLRDNK 301 Query: 263 ELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGF 322 + + Y K++ ++ +S+ A R +F + + Sbjct: 302 QDTQRYEIALWKKVVYPFTVLVMMALSLPFAYL--HARAGAVGLKVFGGIMLGLSFQLVN 359 Query: 323 SYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + H N + I L + + ++ ++ Sbjct: 360 NLFSHVGLLN-TWPAIFTAILPGALYLAVALVALRW 394 >gi|294670275|ref|ZP_06735168.1| permease, YjgP/YjgQ family [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308012|gb|EFE49255.1| permease, YjgP/YjgQ family [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 370 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 46/360 (12%), Positives = 133/360 (36%), Gaps = 21/360 (5%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 ++ + + + + I+ + Q + + + +++ + + G+ + P++ Sbjct: 7 FVKELTFTAIGIFVVILAVLVSTQAINLLGRAADGRVAVDAVAALIGFWTLGMTPLLLVL 66 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 + T VLT R++E+ + + G S ++PVL A+ + + + + P Sbjct: 67 TAYISTLTVLTRFWRDSEMSVWLSCGLSLRQWVRPVLSFALPFAALVAAMQLSVLPWAEL 126 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDD---DLYIKISKYNPNNTLQGIFIVDSRDTQTH 184 ++ + + S +E F L +Y + + ++ +F+ + D Sbjct: 127 RSREFAEILKQKQELSMVEAGEFRTLGKKNGRVYFVGTFDTGSGIMKNLFLREQDDKGRE 186 Query: 185 KIYYAQSGSI--DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE-SANSSTIVLK 241 I +A+ G +++ + L G + P D + + F+ L + + Sbjct: 187 NIIFAKEGRFSLTDNKRTLELTQGYRYGGIPGEADYNQVSFEHLNLIISATPKIINPIDH 246 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + L+ +R+E RL+ L +I ++++ + Sbjct: 247 RRTIPTAKLI----------GSDNPQHRAELMWRLSLPLAALILSILAVPL---SYFNPR 293 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQN--PYYIPILYLFLFCISSIFLLMIKKKYT 359 + I ++ G +++ + IE + ++ L + + +++ +L+ + Sbjct: 294 TGHTYNILFAIGFFLIYQNGLTFLRNAIENSKLGFWTGFLPIHIIMLAAAVILLRVRSMP 353 >gi|302383688|ref|YP_003819511.1| permease YjgP/YjgQ family protein [Brevundimonas subvibrioides ATCC 15264] gi|302194316|gb|ADL01888.1| permease YjgP/YjgQ family protein [Brevundimonas subvibrioides ATCC 15264] Length = 381 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 49/364 (13%), Positives = 107/364 (29%), Gaps = 15/364 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPT 59 + E Y+L +G+S ++ I + +I ++ + S S +L + P Sbjct: 20 LGRIERYVLLQLGKSLAVALGVISALVMLIDFVEISRGLGSDTDLSGVRILGLMLIKSPA 79 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 V+ + PF F T +NR +EL+ + G S + P A+ + Sbjct: 80 VIVQLLPFVFLFGTLAAFVGLNRRSELIAMRAAGVSAWRFVLPAAGAALAAGVLTVTVIG 139 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQG-----IF 174 + ++ + A+ E + + + + F Sbjct: 140 PLAASGDGMFQRERGRISGAVGGGEQEAIWLREGEGQRQMVVRAARQDRANARLLDVTFF 199 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKS--PISKDISIMKFKSYTLQTES 232 I + + + L+ G ++ + L + Sbjct: 200 IYATDPEGRRAFTERIDAA------SASLSAGRWRLVDAVGAQTGQRATRYSTLDLPSSL 253 Query: 233 ANSSTIVLKANDQNLSFLLNP-NPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 A+ A Q+ F P YR + L+ L +++ Sbjct: 254 ADDEAFERFARPQSTPFWSLPGQIQRIEAAGFSSTAYRLRLQQLLSTPLAFAAMTILAAA 313 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + + + ++ + L +F FS + E P +I + + F Sbjct: 314 FSLRLMRLGDLARMAVAAVVLGFAFFFLNQFSAAMGSAEVVPPFIAAWLPAVLTALAAFT 373 Query: 352 LMIK 355 L+ Sbjct: 374 LLFY 377 >gi|89900899|ref|YP_523370.1| permease YjgP/YjgQ [Rhodoferax ferrireducens T118] gi|89345636|gb|ABD69839.1| permease YjgP/YjgQ [Rhodoferax ferrireducens T118] Length = 373 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 50/355 (14%), Positives = 129/355 (36%), Gaps = 13/355 (3%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 I + + RSF + + + + + +++ + S + + + ++ + GY + +P + Sbjct: 7 IRKELARSFGATLIVLATVVMTMTLIRTLGQASRGSFNPSDVMLVMGYTVLAYMPTILTM 66 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 + L+ M R++E++I ++G L+ P+ A + + + ++ P Sbjct: 67 SLFIAIIATLSRMYRDSEMVIWFSSGKGLAALLGPLFRFAWPVLLVVAALALLVLPWSNQ 126 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRL-DDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 I+ L + + +E F + K + + + I Sbjct: 127 RIETLKDQYEKRGDIERIEPGQFQESAGGKRVFFVEKDATGKQAGNNVFIATNEDGKETI 186 Query: 187 YYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAND 244 A+ G I+ + ++L++G+ + D+ I +F+ Y ++ S + Sbjct: 187 TSARRGRIETIGQDRFLMLSNGQRLESVLGTSDLKISEFEEYGIKVGKDVLSGSNYVPIN 246 Query: 245 QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA-ADKRALVRQRK 303 + L N PN +E R+ L + F +I I + R Sbjct: 247 TQPTLALFKNQTLPN---------LAELSWRIGLILAAINFVIIGIAVSGVNPRVGRSAN 297 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + +F + + G S+I +++ +++ + ++L + Sbjct: 298 LVFSLFAFVLYYNLLSLGQSWIASGKFTFGWFLAVVHGGALVLGILWLAKGHNNW 352 >gi|300703337|ref|YP_003744939.1| permease [Ralstonia solanacearum CFBP2957] gi|299071000|emb|CBJ42309.1| putative permease, predicted YjgP/YjgQ family [Ralstonia solanacearum CFBP2957] Length = 372 Score = 91.6 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 46/364 (12%), Positives = 114/364 (31%), Gaps = 20/364 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + L ++ +++ + + ++ S N +L + G L Sbjct: 2 IFEQALRRELSFTAGAVFLVLLTFMLTTLVIRILGMAANGEASPNDVLLLIGLATLGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT +++E+++ G S I+PVL ++ + + + Sbjct: 62 ILLCATLFISVLLVLTRWYKDSEMVVWFTAGLSLTDFIRPVLRFSLPFVVLVALLALFGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + + S + F Y+ + + + Sbjct: 122 PWANQQSALFRDRFEQRDVLSMISAGRFIEPAHGNYVLFIEGVDAGMKHARNLFVANAEA 181 Query: 183 THKIY----YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT-ESANSST 237 + + + ++L+ G + +P D I++F Y ++ Sbjct: 182 DKIGVALAKTGEFKTSPNGDRYVLLDKGRRYEGTPGQLDYRIVEFDRYGVKVASKPPQVD 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 L + + LL+ E R+ L + F LI++ A Sbjct: 242 ANLPTKSRPTTELLS----------NPTPENLGELVWRIGLPLLALNFVLIAVPLAY--- 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMIK 355 + + + P+ ++ I + + + + + L LL Sbjct: 289 VNPRLGRYTPMIFAVLIYLTYSNLLNLSQAWVAQGKMNAMLAWWPIHLLAFVCAVLLFRF 348 Query: 356 KKYT 359 + Y+ Sbjct: 349 RHYS 352 >gi|206602447|gb|EDZ38928.1| Putative permease, YjgP/YjgQ family [Leptospirillum sp. Group II '5-way CG'] Length = 378 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 52/360 (14%), Positives = 120/360 (33%), Gaps = 7/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+ + F++ L +V + Q L +NL+ + S+ +L++ + P Sbjct: 1 MKIIHRYLFLELLPPFVIGLLVLVVLILTQQTLMIMNLLVNKGLSIPTVLRLVMMIFPQF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P +T + + E+ + +G L+ P++ A L + F Sbjct: 61 LTMIIPVSVLAASTATFNRLASDGEITALKASGIGLSRLLWPLVLFAFLGYVGSFYMSLK 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 E +++++ + + +F D I + + + +QG+FI Sbjct: 121 AEETQGMSLQEMISTVLKKKMSLGIRPQVFNNFMDRFVIYVDRMPTFSRMQGVFIYQEGK 180 Query: 181 TQTH-KIYYAQSGSIDLDRQAIILNDGEVHRKS--PISKDISIMKFKSYTLQTESANSST 237 ++ + A+ GS+ + ++ + ++F SY L ++ Sbjct: 181 GKSPSTVIMAREGSLLNEENGRPGIRIQLRSGTLLQGGAAQQFVRFSSYDLTIFGKSAGA 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 L + L + +K T +IF + I Sbjct: 241 TEKSP----TIQELEKKIGRSSKPDVSLLRELEDRYKNYTYPFSCLIFAFLGIPFGIYAK 296 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + S+ + + ++ + P+ ++ FLL++ K Sbjct: 297 RSGKLAGFVFATASVIFFYILNTVDDLMVARRLLKPFVASLIPDLALGAVMGFLLIMVFK 356 >gi|118594056|ref|ZP_01551403.1| permease YjgP/YjgQ [Methylophilales bacterium HTCC2181] gi|118439834|gb|EAV46461.1| permease YjgP/YjgQ [Methylophilales bacterium HTCC2181] Length = 372 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 42/358 (11%), Positives = 119/358 (33%), Gaps = 6/358 (1%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ + R + + L + L + I + + + + + + + + + +P Sbjct: 2 LFKKSLTRELFFTSLSTILVLSGIVVAQRAVIVFRFAARGSIPNDAIDTVLVFNLLKHMP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + L+ +++E++I ++G +LIKP++ + I + I Sbjct: 62 LLLSLTVFITILITLSRWYKDSEMIIWFSSGLGLYSLIKPIILFCFPIIILIASLSLYIS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ + + + F + I + + + I Sbjct: 122 PWAVQKAEEYKTGLKSRDEIATITPGTFKESKSNNRIFYIEGFSSLGSKVKNIFIQSMQN 181 Query: 183 THKIYYA----QSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + + I+L +G + SK+ S F Y + E + + Sbjct: 182 GKLGVIVSNEGERIEDNNNNNYIVLKNGRRYEGIANSKEFSTTTFDEYGILMEKTPKNNL 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + A + N + + +E R++ L + ++I + Sbjct: 242 NVGAKA-GIIEATPTLALIFNQNDSNRKQFLAELMWRISLPLSTIFLIFLAIPLSFINNR 300 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + + + + + F G + + + P ++ L + L F L+ ++ Sbjct: 301 TGRSFN-MIVAVFIFVIYNNFLGIFQSLISVGKIPLWLGFLPVHLVFGLVAFYLLHRR 357 >gi|299133713|ref|ZP_07026907.1| permease YjgP/YjgQ family protein [Afipia sp. 1NLS2] gi|298591549|gb|EFI51750.1| permease YjgP/YjgQ family protein [Afipia sp. 1NLS2] Length = 360 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 49/355 (13%), Positives = 110/355 (30%), Gaps = 9/355 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSST-ESLNILLKISGYLIPTV 60 + Y R + L L I + ++ ++ + SS S ++ + S + +P + Sbjct: 4 TTLARYFARRFIIASLAVFLGIFLLLVLVDYIEMVRRTSSIPTASAIMVAETSLFRVPQL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + PFC + + +++R+ EL++ G S I P L A+L+ + + N Sbjct: 64 LEKLMPFCILIGAMSCYLALSRSLELVVARAAGISAWQFITPALVAALLMGVLATVVYNP 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISK--YNPNNTLQGIFIVDS 178 I + K++ AK +E++ ++ + IS T V Sbjct: 124 ISAAMQERSKEMEAKLFSNGGVQNVEQSWINQVTSEGQSIISAALSQNQGTRLSGVTVFR 183 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + +L+ L +H + + K+ A Sbjct: 184 FNPDGSFRDRIDANEANLEPGEWRLGGARIHSMTAAPVIQDNLLLKT---NLTPAQVRNS 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + L + YR ++ K L + L++ + Sbjct: 241 FATPETVSFWQL-PGYIQSSASSGLATAGYRLQYQKLLARPFLLASMVLVAAAVSL--RF 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 R + ++ F ++ + Y C+ + + Sbjct: 298 FRFGGVQKMVLSGVAAGFLLYVLSKVTEDLSKAELMYPLAAAWLPVCVGGLTGFL 352 >gi|209885475|ref|YP_002289332.1| permease YjgP/YjgQ [Oligotropha carboxidovorans OM5] gi|209873671|gb|ACI93467.1| permease YjgP/YjgQ [Oligotropha carboxidovorans OM5] Length = 364 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 47/354 (13%), Positives = 114/354 (32%), Gaps = 6/354 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSST-ESLNILLKISGYLIPTV 60 + Y R + L I + ++ ++ + SS S ++ + S + +P + Sbjct: 8 TTLARYFARRFIVASCAVFLGIFLLLVLVDYIEMVRRTSSIPTASAFMVAQTSLFRVPQL 67 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + PFC + + +++R+ EL++ G S I P L A+++ I ++ N Sbjct: 68 LERLMPFCILIGAMSCYLALSRSLELVVARAAGISAWQFITPALVSALVMGILATVAYNP 127 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I + K++ A+ + ++ ++ + IS N + V Sbjct: 128 ISAAMQERSKEMEAQLFSNGGVQDVAQSWINQVTSEGQSIISAALSQNQGTRLSGVTVFR 187 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + + D + + G S + I F + + Sbjct: 188 FNPDGSFRDRIDARDANLEPGQWRLGGARIYSMTAAPIPHDSFL-LSTNLTPSQVRNSFA 246 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + L + YR ++ K L + L++ + R Sbjct: 247 TPETVSFWQL-PEYIRSSQSSGLATAGYRLQYQKLLARPFLLASMVLVAAAVSL--RFFR 303 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + ++ F ++ S + + + P+ +L + + Sbjct: 304 FGGVQKMVLSGVAAGFLLY-VLSKVTEDLSKAELMHPLAAAWLPVCVGGLIGFL 356 >gi|17547136|ref|NP_520538.1| hypothetical protein RSc2417 [Ralstonia solanacearum GMI1000] gi|17429438|emb|CAD16124.1| putative permease transmembrane protein [Ralstonia solanacearum GMI1000] Length = 401 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 52/396 (13%), Positives = 117/396 (29%), Gaps = 41/396 (10%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I F+ ++ + +L + V +L PT Sbjct: 7 MQVYEKYFARQIYGVFVFILFAVLALFIFFDMLSELGSVVGRYTTLIAFFH-VMLQAPTR 65 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + V + M +E I G + + +A+ L++ ++ Sbjct: 66 VYEVIPVAALISAIYVFSQMASQSEFTIFRVAGLDTRRALLSLFKIALPLALVTYVFGEF 125 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-----------LYIKISKYNPNNT 169 I PK +++ +A A S ++ + ++ + PN T Sbjct: 126 IGPKSEQFAQKVRLEALGATVSSGFRSGVWVKDRGPARPDGSGGEVTRFVNVGTLQPNQT 185 Query: 170 LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKS----------------- 212 +QG+ I + + Q LND R Sbjct: 186 IQGLRIYEFDANYRLSSIRVAQQARYQGHQHWELNDVTETRFIEFPRHAGAATPQDSKQA 245 Query: 213 -PISKDISIMKFKSYTLQTESANSS--------TIVLKANDQNLSFLLNPNPNNPNYRPE 263 P + D F+ + + ++++ D+ + L + + Sbjct: 246 VPGAPDALAPDFRGEQTRLPKQDMRSELTPQILSVLMVTPDRMATLDLFQYIRHLRDNKQ 305 Query: 264 LLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFS 323 + Y K++ ++ +S+ A R +F + + + Sbjct: 306 DTQRYEIALWKKVVYPFTVLVMMALSLPFAYL--HARAGAVGLKVFGGIMLGLSFQLVNN 363 Query: 324 YIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYT 359 H N + I L + + ++ ++ Sbjct: 364 LFSHVGLLN-TWPAIFTAILPGALYLAVALVALRWA 398 >gi|194364315|ref|YP_002026925.1| permease YjgP/YjgQ family protein [Stenotrophomonas maltophilia R551-3] gi|194347119|gb|ACF50242.1| permease YjgP/YjgQ family protein [Stenotrophomonas maltophilia R551-3] Length = 360 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 47/356 (13%), Positives = 122/356 (34%), Gaps = 14/356 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L +SFL + + ++ ++ ++ + ++ +L G Sbjct: 1 MLKLDRYLLGDFVQSFLATLIVLLVVSVGGVLVDILGNIADGRLPAKLLFSQLGLQFIAY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP++ P + + + R++E+ +I G L++P+L L + + + Sbjct: 61 LPLILPLALMLGLLLAVARLYRDSEMAVITAIGVGPKRLLRPLLMLVLPVVALVGACSLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +Q+ +A ++ + LE F L + + +S +P+ T G + + Sbjct: 121 LGPWAGRVAEQMIIEANRSVLMAGLEPGRFTPLPNGGVVYLSSISPDGTRLGRVFLQRQK 180 Query: 181 TQTHKIYYAQSGSIDLDRQAII---LNDGEVHRKSPISK-DISIMKFKSYTLQTESANSS 236 ++ A G + + L+DG D + F + + Sbjct: 181 DDRLEVVSAAGGRMFFEGARQRFLELDDGHQVEGPVAGGLDYRLATFARNDVALPDGAQT 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + +++ H+RL L + F L+++ Sbjct: 241 RTENDPELMPTTKLF----------GDARPEAQAQLHRRLAPPLIALAFALLTVPLGRSS 290 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 ++ ++ ++ + + + S I + +I++ Sbjct: 291 PRQQRYGRMMLALLAYMVGTNLMFIGSGWIATGKIPAALGLWWLTLPLLGLAIWMY 346 >gi|313668051|ref|YP_004048335.1| hypothetical protein NLA_7130 [Neisseria lactamica ST-640] gi|313005513|emb|CBN86949.1| conserved hypothetical integral membrane protein [Neisseria lactamica 020-06] Length = 392 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 45/365 (12%), Positives = 144/365 (39%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ +++ + + + + ++ + Q + + + +++ +L + G+ I + P Sbjct: 23 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWIIGMTP 82 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ ++ + + + + Sbjct: 83 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWVM 142 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD---LYIKISKYNPNNTLQGIFIVDSR 179 P ++ + + S +E F L +Y + + ++ +F+ + Sbjct: 143 PWAELRSREYAEILKQKQELSLVEAGRFNTLGKRNGRVYFVETFDTESGIMKNLFLREQD 202 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANSS 236 I +A+ G S++ +++A+ L DG + +P D + + F+ +L + Sbjct: 203 KNGNDNIIFAKEGNFSLNNNKRALELRDGYRYSGTPGKADYNRVSFRHLSLIISTTPKLI 262 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + L+ +++E R++ + ++ ++A Sbjct: 263 DPVSHRRTIPTAQLI----------GSSNPQHQAELMWRISLTVSVLLLC---LLAVPLS 309 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMI 354 + + I I++ + G + + + + +++ +L + + + +L+ Sbjct: 310 YFNPRGGHTYNILIAIGLFLIYQNGLTLLFEAVENGKIHFWLGLLPMHIIMFAVALILLR 369 Query: 355 KKKYT 359 + Sbjct: 370 VRSMP 374 >gi|160898976|ref|YP_001564558.1| permease YjgP/YjgQ family protein [Delftia acidovorans SPH-1] gi|160364560|gb|ABX36173.1| permease YjgP/YjgQ family protein [Delftia acidovorans SPH-1] Length = 369 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 46/370 (12%), Positives = 120/370 (32%), Gaps = 14/370 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVS---SSTESLNILLKISGYLI 57 M+ + R I + L + + + ++ + V + + L I Sbjct: 1 MRVLRNLLYRDIIAAVGYVTLAFLALFFFFDLVDELRWVGRGGDNGYQITHALLFVVLRI 60 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 P+ L + P + T V+ +++E I+ +G ++ ++ L + + F + Sbjct: 61 PSHLYELMPITVLIGTIYVMARFAQSSEFTIMRTSGMGPWLALRTLMVLGLGFVLATFGT 120 Query: 118 ENIIEPKCRST-IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + + P + + + + D + I + + I Sbjct: 121 GDYLAPAAENAGQNIRAIHLAQLSRGATGAWLKERQGDHSIAINVRAIRGPGDFSNVRIF 180 Query: 177 DSRDTQT-HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKS-----YTLQT 230 D +AQ+ + D ++ L E R + ++ + + Sbjct: 181 DFDGQGRISAQIHAQAAQVSEDGESWTLQGVEASRLKAKADAGMVLLREKEDSLVWKTGI 240 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 + S +LK + + L + + + Y EF +++ + ++ ++++ Sbjct: 241 SAEMVSAALLKPDRMSTISLFQ-YVRHLEANGQAAQKYEIEFWRKVFYPMSCLVMVVLAL 299 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 A + ISF + F YI +P+ L+ + S+ Sbjct: 300 PFAYLHFRSGGIAAYVFGGVMAGISFFLLNNVFGYIGTLQTWSPWLTAAAPGLLYSLLSL 359 Query: 350 --FLLMIKKK 357 F ++ ++ Sbjct: 360 TAFTWLVLRR 369 >gi|224825295|ref|ZP_03698400.1| permease YjgP/YjgQ family protein [Lutiella nitroferrum 2002] gi|224602216|gb|EEG08394.1| permease YjgP/YjgQ family protein [Lutiella nitroferrum 2002] Length = 366 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 50/358 (13%), Positives = 124/358 (34%), Gaps = 16/358 (4%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 F+ + R + + + + ++ I Q + + + + + + G+ + P+ Sbjct: 3 FQKSLTRELTFTAVSVFVVLLAILVTTQTINLLGRAAEGRIANEAVAALIGFWTLGLFPL 62 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 + + VLT + R+ E+ + +G S +KPVL A+ L+I + IS +I P Sbjct: 63 LLILTVFISVLVVLTRLWRDHEMAVWLASGVSLKDWVKPVLRFAVPLAILVGISSLLIGP 122 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + + S + +F + + I ++ Sbjct: 123 WAEQRSHEYAEILKQHEDVSAISPGIFKESHSSRRVYFVENFSGKNGSAANIFMQDMSKG 182 Query: 184 HK-IYYAQSGSIDLDRQAI---ILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +A+SG I + Q +L +G + +P D + +F Y++ Sbjct: 183 KVASIFAKSGRIVTNEQGERLLLLENGRRYVGNPGEADYEVAEFARYSVVINDQPQFIPS 242 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + S L + + ++E R++ + V+ L++I Sbjct: 243 GNSRQTMTSAALALSDKAGD---------KAELGWRVSMPISTVVLALLAIPL---SYFN 290 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + + ++L F + + + Q+ + + + L M+ + Sbjct: 291 PRSGHTYNLLLALLAYFVYQNALTLCRNWVLQDRLSAYAMLAPHMLMLLVALGMLAYR 348 >gi|34498370|ref|NP_902585.1| hypothetical protein CV_2915 [Chromobacterium violaceum ATCC 12472] gi|34104224|gb|AAQ60583.1| conserved hypothetical protein [Chromobacterium violaceum ATCC 12472] Length = 368 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 48/334 (14%), Positives = 109/334 (32%), Gaps = 17/334 (5%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 F+ + R + + L + ++ I Q + + + + + + G+ P+ Sbjct: 3 FQKSLTRELTLTALGVFVVLLAIIVSTQAINLLGRAAEGQIANEAVTALIGFWTLGFFPV 62 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 + + VLT R+ E+++ + G S + P++ + L+I + + P Sbjct: 63 LMILTVFVSVLVVLTRTWRDHEMVVWLSAGLSLRDWVWPIMRFTLPLAILIAGVTLFVGP 122 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD-TQ 182 + + + S + +F + + I Sbjct: 123 WADQRSQDYAEIIKRREEISAISPGVFKESASSSKVYFIENYSGLHSAATNIFMQDMTDG 182 Query: 183 THKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST-I 238 +A+ G I + ++L DG+ + P D I +FK YT + + T Sbjct: 183 KVSTIFAKHGYISIKPDGERVLVLEDGKRYVGEPGQADYQIGEFKRYTASLGDSQAVTGP 242 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 S LL YR+E RL+ + ++ ++A Sbjct: 243 ASNRQSIPTSVLL---------AGSGNPEYRAELAWRLSMPISCILLA---LLALPLSYY 290 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN 332 + + + +L F G + + + Q+ Sbjct: 291 NPRSGHTYNLLFALLAFFVYQNGLTLTRNWVGQD 324 >gi|241663806|ref|YP_002982166.1| permease YjgP/YjgQ family protein [Ralstonia pickettii 12D] gi|240865833|gb|ACS63494.1| permease YjgP/YjgQ family protein [Ralstonia pickettii 12D] Length = 372 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 50/363 (13%), Positives = 118/363 (32%), Gaps = 18/363 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + L ++ +++ + + ++ + N +L + G L Sbjct: 2 IFEQALRRELSFTAGAVFLVLLTFMLTTLVIRILGMAANGEANPNDVLLLIGLATLGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT +++E+++ +G S I+PVL ++ + + + Sbjct: 62 ILLCATLFISVLLVLTRWYKDSEMVVWFTSGISLTDFIRPVLRFSLPFILLVALLALFGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + + S + F Y+ + N + + Q Sbjct: 122 PWANQQSALFRDRFEQRDVLSMISAGRFIEPAHGNYVLFIEGVDNGMKHARNVFVANAEQ 181 Query: 183 THKIYYAQS----GSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 ++ + I+L+ G + +P D I++F Y ++ + Sbjct: 182 DKIGVAMAKTGEFKTMPNGDRFIVLDKGRRYEGTPGKLDYRIVEFDKYGVKVANKPPQAD 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + L NP N E R+ L + F LI+I A + Sbjct: 242 ANLPTKSRSTKDLLANPTPENLG---------ELVWRIGLPLLALNFVLIAIPLAY---V 289 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMIKK 356 + + P+ ++ I + + + ++ + L LL + Sbjct: 290 NPRLGRYTPMIFAVLIYLTYSNLLNLSQAWVSQGKMNVFMAWWPIHLAAFICAVLLFRFR 349 Query: 357 KYT 359 Y+ Sbjct: 350 HYS 352 >gi|114326913|ref|YP_744070.1| permease [Granulibacter bethesdensis CGDNIH1] gi|114315087|gb|ABI61147.1| permease [Granulibacter bethesdensis CGDNIH1] Length = 404 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 37/365 (10%), Positives = 109/365 (29%), Gaps = 22/365 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y++R I R F+ + + ++ + ++++ + L Sbjct: 40 IIQTYLIREIMRPFVPVLAVLAGLFGSFSAAGFLSDAVNGLLPTGSIIQMVSLKVLIALE 99 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + +N + E+ + + + VL L + +++ + Sbjct: 100 VLIPISLYLSVLLAFGRLNSDQEITAMAALRVQPERIWRIVLSLCLAMAVVVGALSLFAR 159 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEE-NLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + LS +A ++L +E + + I + V Sbjct: 160 PWAYARLHALSDQAHVSLNTDAMEAGTFYIGPKGNRVIFFTHRQGPEEPASGVFVQLWSP 219 Query: 182 QTHKIYYAQSGSI-----DLDRQAIILNDGEVHRKS-PISKDISIMKFKSYTLQTESANS 235 +I A+ + I+L+D ++R + + ++ L + + Sbjct: 220 DRMEIISARQAMTLRPASPDAKSQILLSDAHIYRFNRSGEGNDEVLDAAETVLDIQPNKA 279 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 A LL +E R + + + L+ ++ Sbjct: 280 DAAAYSAVATASRLLL----------GSPSPADIAELQWRFSTPVSTL---LLGLLGIPM 326 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLM 353 ++ + ++ F + + + P I ++ + +L+ Sbjct: 327 SRSKPRQSRYARFGAAILAYFSYYLLCTSARTWVQHGVVPAIPGIWWVPALLGVVLLILL 386 Query: 354 IKKKY 358 ++ Sbjct: 387 YGPRW 391 >gi|59711021|ref|YP_203797.1| inner membrane protein [Vibrio fischeri ES114] gi|59479122|gb|AAW84909.1| conserved inner membrane protein [Vibrio fischeri ES114] Length = 344 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 43/335 (12%), Positives = 102/335 (30%), Gaps = 22/335 (6%) Query: 28 WVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELL 87 + + + S ++L + G +P + ++ P + + +E+ Sbjct: 1 MSQKFISVLADASDGDIPGGLILSLVGLNMPAMGLLMLPLSIFIGILLTFGRLYAESEIT 60 Query: 88 IIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFS-YLE 146 +++ TG LI+ L+LA++ + + P + QL + + Sbjct: 61 VMNATGMGNSILIRAALYLALITGAAATFNSLWLSPWSQEKTTQLMETVESDAGVDLLQK 120 Query: 147 ENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD-------TQTHKIYYAQSGSIDLDRQ 199 D + I + N + I ++ + RQ Sbjct: 121 GQFQRSPDGKAVVFIDDISNKNGKELRHIFLAQPVPHDSLRPSVLVADKGVVKELKDGRQ 180 Query: 200 AIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPN 259 + L DG + P D FKSY + + L+ Sbjct: 181 VLELQDGTRYEGIPTRLDYLESNFKSYEVLIGQKEVKEKRRDWDAIPTLDLM-------- 232 Query: 260 YRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVF 319 ++E R++ + L+++V A+ ++ + + ++ + F Sbjct: 233 --KRPELEAKAELQWRISL---IICIPLLTMVVVPLSAVNPRQGRFAKLGPAVLLYLAYF 287 Query: 320 WGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFLLM 353 S IE I L+ + + +++ Sbjct: 288 LSLSAGKSAIEDGGLAPSIGLWAINATLLLVGIVL 322 >gi|53803848|ref|YP_114530.1| hypothetical protein MCA2100 [Methylococcus capsulatus str. Bath] gi|53757609|gb|AAU91900.1| conserved hypothetical protein [Methylococcus capsulatus str. Bath] Length = 339 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 44/345 (12%), Positives = 106/345 (30%), Gaps = 21/345 (6%) Query: 24 VFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRN 83 + I + L + + + + + G + L + P + VL M R+ Sbjct: 1 MTIVVSRKFLAILARAIEGEVATDTIFTLLGLKVVVTLASLLPASVFLSVLMVLGRMYRD 60 Query: 84 TELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFS 143 E+ + G + + + +L A + + P ++L +K + Sbjct: 61 NEMTVFACAGVGPLRIYRSILLFAGPVCVLGAFLSLQAMPWSERLSQELISKDEKGADVR 120 Query: 144 YLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLD---RQA 200 ++ F + ++ + SR I A+SG ++++ Sbjct: 121 GIKAGRFNEFSQGDVVLYAEQLNTDKTMSRVFAQSRRGDETGIVIAESGHMEINDAGDHF 180 Query: 201 IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNY 260 ++LN+G ++ P D + +F++Y ++ S L ++ + Sbjct: 181 VVLNNGRRYQGVPGRADFVLNEFQAYGVRINPPEGSQAA----------LKREAADSLHL 230 Query: 261 RPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGV-- 318 +E +RL L L+++ A + + + I Sbjct: 231 WMSGRPRELAELQRRLAVPLGTFTLTLLAVPIA---RTSPRGGVWGNLISAFLIYIIYEN 287 Query: 319 ---FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 K+ Y I + L S + ++ + Sbjct: 288 LQKISQGLLATGKLSVWTSYAGIYAVMLLATSVLLARNSGWRWVR 332 >gi|162146456|ref|YP_001600915.1| hypothetical protein GDI_0632 [Gluconacetobacter diazotrophicus PAl 5] gi|209543541|ref|YP_002275770.1| permease YjgP/YjgQ family protein [Gluconacetobacter diazotrophicus PAl 5] gi|161785031|emb|CAP54575.1| putative membrane protein [Gluconacetobacter diazotrophicus PAl 5] gi|209531218|gb|ACI51155.1| permease YjgP/YjgQ family protein [Gluconacetobacter diazotrophicus PAl 5] Length = 363 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 46/363 (12%), Positives = 125/363 (34%), Gaps = 13/363 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+LR IG+ + + ++ + S N +L + + L Sbjct: 2 IIRNYLLREIGKPLAAMLGVCMALFASYSAADFLSEAVNGLLSTNTILALVTLKLLIGLE 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L ++ N+E+ + + +++ V+ LA ++I + + + Sbjct: 62 VLVPVSLYLSIVLALGALYGNSEITALHALRVTPGMILRHVMTLAAGVAIVVGLLSLFVR 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEE-NLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + LS AQL+L ++ + + I +++ T V R Sbjct: 122 PWAYHQLHNLSKSAQLSLDVDAMQAGTFYVVQNGARVIFLTEREGPGTPARDIFVQVRRA 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 +T +I +A+ G D + + + + + I Sbjct: 182 KTTQIIHAELGYPMTDEGKQ-----SDVYVRLKNAHVYDIGRQPGVSD-KVLTVREITQD 235 Query: 242 ANDQNLSFLLNPNPNNPNYR--PELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 N + L + P+ + +EF RL+ + ++ ++++ A Sbjct: 236 PNRHSTEPLGYSSIAAPSLQLAASHAPADVAEFQWRLSTPITTMLLAMLAVPLA---RGR 292 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKI-EQNPYYIPILYLFLFCISSIFLLMIKKKY 358 ++ + + ++ I F + ++ + +P ++ ++ + M++ + Sbjct: 293 PRQNRYGKLGAAILIFFVYYLLYTSARTWVQHGMVAAMPGIWWAPALLAVLTGFMLRDQI 352 Query: 359 TKI 361 + Sbjct: 353 PAL 355 >gi|330813916|ref|YP_004358155.1| putative permease YjgP/YjgQ family protein [Candidatus Pelagibacter sp. IMCC9063] gi|327487011|gb|AEA81416.1| putative permease YjgP/YjgQ family protein [Candidatus Pelagibacter sp. IMCC9063] Length = 358 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 62/355 (17%), Positives = 139/355 (39%), Gaps = 9/355 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 Y + I RS+ + F+ W+ Q + + L++ S+++ + Y +P ++ Sbjct: 4 NKLNNYFIAEILRSYAFVLATLSFLIWIAQSARFLYLITDMGLSMSVYVPYILYQLPKIV 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + F + + N E+ I +G S+ T++ +L ++++ + F + Sbjct: 64 SQMMLISFLISLFISIIKFQNNKEMEIYWLSGVSKKTIVWTILKISLVPTFVAFFLYIYL 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + A ++ + +++N F +L + + + + L+ +++ + Sbjct: 124 APMTGLISRNILANSEFTFVNALVKKNNFNSPFRNLTVYVGENDNRGNLEKVYLF---EN 180 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 I ++ + L DG +H+K+ K I ++ T+ ++ T K Sbjct: 181 NKTIIAKQGKVLNVDNKNYLQLIDGFIHQKNKNGKIQIIKFEETLYDFTKYKSNLTTYPK 240 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 +++L +L N NN + + E HKR+ + LF I L+ + Sbjct: 241 LQERSLLWLFNELKNNRKEKNNTI----FEIHKRIFKPLFIPIIALLCCFILYGN--NEK 294 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + F S+S F +I N ++ LY F C+ I + K Sbjct: 295 FNLVKLRFSIFSLSVLFIIFFEILISLSSSNIFFQYFLYSFPMCVGIIIYFFLHK 349 >gi|146340303|ref|YP_001205351.1| putative permease [Bradyrhizobium sp. ORS278] gi|146193109|emb|CAL77120.1| putative permease [Bradyrhizobium sp. ORS278] Length = 365 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 51/354 (14%), Positives = 106/354 (29%), Gaps = 15/354 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTV 60 + Y S + I + ++ ++ + S ++ S ++ + S + +P + Sbjct: 6 NTLGRYFAGRFLVSAVGVFASIFLLLVLVDYIEMVRRTSGLASASALMVAETSLFRVPQL 65 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + PFC + +++R EL++ G S I P L AI+L + N Sbjct: 66 LEKMMPFCVLIGAMTCYLALSRRLELVVARAAGVSAWQFIAPALASAIVLGLMATTLYNP 125 Query: 121 IEPKCRSTIKQLSAKAQLALT------FSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF 174 + R K++ A+ + S N + L G+ Sbjct: 126 MSANLRELSKRMEAELFGSAPGGGVQDASGFWLNQLNPDGSVIINAARSEQQGVRLTGLT 185 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + K + D Q + V R S + + F T A Sbjct: 186 LFRFDTKNRFKDRIEAREASLEDGQWVF---KSVRRFSLDAPPVDEPTFILPT-TLTPAQ 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + L + + YR ++HK + Q +++ + Sbjct: 242 VRNSFSTPETVSFWQLPS-YIRSSESSGFATAGYRLQYHKLIAQPFLLAAMVMLAASVSL 300 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 R + + F ++ S + + + PI +L Sbjct: 301 --RFFRMGGVQKMVLSGVGAGFLLY-VLSKVTEDLSKAALMDPIAAAWLPVFVG 351 >gi|42526554|ref|NP_971652.1| hypothetical protein TDE1044 [Treponema denticola ATCC 35405] gi|41816747|gb|AAS11533.1| membrane protein, putative [Treponema denticola ATCC 35405] Length = 357 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 49/356 (13%), Positives = 112/356 (31%), Gaps = 2/356 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y+L+ +F+++ LF + + + + I + ++K+ IP Sbjct: 1 MKLLQRYLLKLFIPTFVVAMLFFILLLQLGDLFANIVAYLQNGAQFKDIVKVMWLYIPKC 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + ++ EL I + G S P+L L S+ + E+ Sbjct: 61 IAYSVPLAILFAGSYTMGNLYAQNELTSIFSAGISLGRFTLPLLVLGFFFSVGMIFFEDN 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + K QLS K ++ + + +N N + RD Sbjct: 121 VVIKYFYEKTQLSKKLLQEEESLDTQDLVILSELGKIVYTADYFNAENQTLANAYIIVRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + +S + + + EV+R + + + +E + L Sbjct: 181 EDGNLSLVIKSSHMVWNEDRWTTDSAEVYRFDEKNSVSCLNNIPDNIILSEPPANFQKNL 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + D+ S++H+R + I SI + Sbjct: 241 SSVDEMRISEAKEFIAALKKNGLPYYEALSKYHRRFSFPFTIFIVLFFSISLG--GKFKK 298 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + +F + ++ + + + +F S + + ++KK Sbjct: 299 NILLMSILFSLGIATLFYVTEMVTMLSAKWEYISPLAGAWTPIFIFSILSIFLLKK 354 >gi|83594405|ref|YP_428157.1| permease YjgP/YjgQ [Rhodospirillum rubrum ATCC 11170] gi|83577319|gb|ABC23870.1| permease YjgP/YjgQ [Rhodospirillum rubrum ATCC 11170] Length = 366 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 46/354 (12%), Positives = 115/354 (32%), Gaps = 15/354 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 ++ YI R + + + L + + + +++ S ++++L+++ Y +P L Sbjct: 5 RTLTTYIARTYLTALVGATLVVGALLMLFDVIEITRRSGSKAIGIDVVLEMALYHLPMSL 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PF F + + R++EL++I G S + PV+ + ++L I N + Sbjct: 65 QSALPFVFMGGAVMIFWKLARSSELVVIRAAGLSVWQFLAPVIAVVVVLGIANVTLLNPL 124 Query: 122 EPKCRSTIKQLSAKAQLALTFS--------YLEENLFFRLDDDLYIKISKYNPNNTLQGI 173 + +++ A + +L EN + + + + G+ Sbjct: 125 AAHLYTKYERMDAGMDSGVANPLALSDGGLWLRENNPEGQVVMHAQGVRQVDNALRMTGV 184 Query: 174 FIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 I + + + + ++ + + + Sbjct: 185 TIFRYGPDRRFESRIDAETAGLREGALVLTSVVTTYPGRVG----ERAETLEVPSNLTLP 240 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + L +R +H + L + L+ V + Sbjct: 241 KIQDSFSPPETVSFWEL-PAFITFFEAAGFSAHAHRLHWHSLIASPLLLIAMVLMGAVFS 299 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCIS 347 K + R + I +++ FGVF+ FS I + + + L + + Sbjct: 300 LKPSQ-RSVNWLFRIVGAVAAGFGVFF-FSKITYTLGLSQTLPVNLAAWSPALV 351 >gi|225619415|ref|YP_002720641.1| Permease [Brachyspira hyodysenteriae WA1] gi|225214234|gb|ACN82968.1| Permease [Brachyspira hyodysenteriae WA1] Length = 356 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 109/357 (30%), Gaps = 4/357 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+L+ F S L V + + + R++ + E +N + P Sbjct: 1 MKKLNAYLLKEFLSFFFGSLLLFVVLVTIADLSSRLSFYTEHPELINYFITYHLARAPHN 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P +T VL + +N E+L I+N+G S P+ + I L +FL Sbjct: 61 TYYIFPVALMFSSTYVLGTFVKNKEMLAIENSGISLFKFSMPMFIIVIGLCLFLVFFWEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + + S F ++ LY + + +Q IV D Sbjct: 121 VAAPLNKVSFAANDAMRGREQVSKSGPWQLFGGNNHLYFIETYFYKEQYMQNTIIVKLDD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + + + +K+I + K +Y L Sbjct: 181 DGGIQFRVSSPHIQWNNEDRKWYVMDGILTTFSENKEIKVEKVNNYPLDLLERPEHFYGR 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 D + ++ H R++ I L++ + + Sbjct: 241 PPLDAMSLSEESHIIKLQKEVNMNTSKLETDLHYRISYCFSGFIIVLLASLFSKFSTQS- 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + + I +++ + + + + ++ I L ++ K Sbjct: 300 ---VLVVSLVMVIIVALLYYSILMVFRSMGEAGDINAFIAAWMPNIIFAILCILAFK 353 >gi|56479504|ref|YP_161093.1| hypothetical protein ebA7173 [Aromatoleum aromaticum EbN1] gi|56315547|emb|CAI10192.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1] Length = 359 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 43/362 (11%), Positives = 121/362 (33%), Gaps = 18/362 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F + R +S + + I + +++ + + + +L + G+ + LP Sbjct: 2 IFSRALQREFFQSAAGVFVALFAILITVVLIRLLGQAAGGRLPSDAVLALIGFGSLSRLP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V + L+ R++E+++ +G I+PVL A+ + + + + Sbjct: 62 IVLSLTVFIAVLLSLSRSYRDSEMVVWFASGLPLTAFIRPVLRFALPIVLTIAAVTLFVA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRL-DDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + A+ S + +F + + V + Sbjct: 122 PWAQLKSAEYQARIDSRNDASRIAPGVFRESVGAQRVFFVETGAGEDGKVRNVFVSTEKD 181 Query: 182 QTHKIYYAQSGSIDLD---RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + GS+ D + ++L G + P S + +++F Y++ E ++ Sbjct: 182 GRLDVIVSAEGSLRTDAEGDRFVVLEKGRRYEGEPGSPEYRVLEFDRYSVLVEEREAAGP 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + + LL + E R+ + ++ ++A + Sbjct: 242 ASRTSTTPTLELL----------ADPTPRKLGELLGRIGMPVAALLLA---LMAIPLSFV 288 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-PYYIPILYLFLFCISSIFLLMIKKK 357 + + + + ++ S + Q + ++L + ++ LM ++ Sbjct: 289 NPRAGRANNLLFAILTYLVYSNAISVFQAWVSQGRLRFELAVWLPHVVVLAVLALMFYRR 348 Query: 358 YT 359 Sbjct: 349 LA 350 >gi|94311741|ref|YP_584951.1| permease YjgP/YjgQ [Cupriavidus metallidurans CH34] gi|93355593|gb|ABF09682.1| predicted permease [Cupriavidus metallidurans CH34] Length = 387 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 51/385 (13%), Positives = 118/385 (30%), Gaps = 32/385 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + +E Y R I F ++ + +L + V SL PT Sbjct: 4 LSVYERYFARLIYGVFAFILFAVLALFVFFDMLSELESVQGKYTSLIAFFH-VMLEAPTR 62 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + V + + +E I G + + + LA+ L++ FI Sbjct: 63 IYEVLPIAVLISAIYVFSQLASQSEYTIFRVAGLNTRQALFSLFKLAVPLALATFIFGEF 122 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-----------LYIKISKYNPNNT 169 I P +++ +A A S ++ + D ++ + P+ + Sbjct: 123 IGPAAEQYAQKIKLEAIGATVSSGFRSGVWVKDRDREPEEKGAGEITRFVNVQGLRPDQS 182 Query: 170 LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSP--------------IS 215 + G+ I + ++ Q+ LND R Sbjct: 183 ITGVTIYEFDKDYRLRVIRVAKEGKYQGGQSWQLNDVNETRFIELRDGQPAANRDALAPD 242 Query: 216 KDISIMKFKS--YTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFH 273 ++F + + S ++++ + + L + + + Y F Sbjct: 243 FRGEQVQFPNILMHSELTPQILSVLLVQPENMSTVNLFR-YIRHLRDNKQDTQRYEIAFW 301 Query: 274 KRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP 333 K++ L + +++ A A I L +SF + + + Sbjct: 302 KKVVYPLTLFVMVALALPFAYLHARAGAVGVKVFGGIMLGLSFHLSNTLFSHVGLLH--- 358 Query: 334 YYIPILYLFLFCISSIFLLMIKKKY 358 + PI+ + + + + ++ Sbjct: 359 TWPPIVSALVPGTLYLMIALGALRW 383 >gi|197336301|ref|YP_002155170.1| permease YjgP/YjgQ family protein [Vibrio fischeri MJ11] gi|197317791|gb|ACH67238.1| permease YjgP/YjgQ family protein [Vibrio fischeri MJ11] Length = 344 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 43/335 (12%), Positives = 102/335 (30%), Gaps = 22/335 (6%) Query: 28 WVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELL 87 + + + S ++L + G +P + ++ P + + +E+ Sbjct: 1 MSQKFISVLADASDGDIPGGLILSLVGLNMPAMGLLMLPLSIFIGILLTFGRLYAESEIT 60 Query: 88 IIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFS-YLE 146 +++ TG LI+ L+LA++ + + P + QL + + Sbjct: 61 VMNATGMGNSILIRAALYLALITGAAATFNSLWLSPWSQEKTTQLMETVESDAGVDLLQK 120 Query: 147 ENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD-------TQTHKIYYAQSGSIDLDRQ 199 D + I + N + I ++ + RQ Sbjct: 121 GQFQRSPDGKAVVFIDDISNKNGKELRHIFLAQPVPHDSLRPSVLVADKGVVKELKDGRQ 180 Query: 200 AIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPN 259 + L DG + P D FKSY + + L+ Sbjct: 181 VLELQDGTRYEGIPTRLDYLESNFKSYEVLIGQKEVKEKRRDWDAIPTLDLM-------- 232 Query: 260 YRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVF 319 ++E R++ + L+++V A+ ++ + + ++ + F Sbjct: 233 --KRPELEAKAELQWRISL---IICIPLLTMVVVPLSAVNPRQGRFAKLGPAVLLYLAYF 287 Query: 320 WGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFLLM 353 S IE I L+ + + +++ Sbjct: 288 LSLSAGKSAIEDGGLAPSIGLWAINATLLLVGIIL 322 >gi|325285312|ref|YP_004261102.1| permease YjgP/YjgQ family protein [Cellulophaga lytica DSM 7489] gi|324320766|gb|ADY28231.1| permease YjgP/YjgQ family protein [Cellulophaga lytica DSM 7489] Length = 341 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 56/344 (16%), Positives = 123/344 (35%), Gaps = 8/344 (2%) Query: 19 SCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLT 78 L V I ++ + ++I + + +L+ I + ++ P + + Sbjct: 1 MLLLFVPIGVMLDLAEKIAKMVRNEAPTLEILEYYMNFIIYIGSLLFPIFLFLSIIFFTS 60 Query: 79 SMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQL 138 + NTE++ I ++G S ++P A +++I +F+ I PK + K Sbjct: 61 KLASNTEIVAILSSGVSFGRFLRPYFMGATIIAILMFVMAMFIVPKASLDYHEFIFKYLK 120 Query: 139 ALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI--VDSRDTQTHKIYYAQSGSIDL 196 N++ +L+++ ++ IS ++PN L F+ D + A S Sbjct: 121 KGKKFQETTNIYNQLNENEFLYISSFDPNRQLGSNFVLEHFDNDDKLAYKLTASSIRWIP 180 Query: 197 DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPN 256 L + I + + + + A +N+ L + Sbjct: 181 KDTIYRLTGFTSRTVKGNVEVIEKKSRLDTIFDFKIDDLTPVSYVAETKNIFELNKFIED 240 Query: 257 NPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISF 316 + TY +KR + I LI++ ++ R+ + + I+F Sbjct: 241 QRKKGASNINTYVMAKYKRWALPVSAFILTLIAVSV---SSIKRRGGMGLNLAFGIVIAF 297 Query: 317 GVFW---GFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + F+ + K +P I+ +F I ++LL K+ Sbjct: 298 VYIFFDRVFAILAEKAGLSPLIAIIIPNAIFAIIGLYLLKNAKR 341 >gi|320537761|ref|ZP_08037684.1| hypothetical protein HMPREF9554_02438 [Treponema phagedenis F0421] gi|320145384|gb|EFW37077.1| hypothetical protein HMPREF9554_02438 [Treponema phagedenis F0421] Length = 356 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 44/356 (12%), Positives = 113/356 (31%), Gaps = 1/356 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y+L+ + L++ LF + + + + + ++ L +L++ + P Sbjct: 1 MKILQRYLLQIFFPTALVAILFFILLLEIGDLFANLPTYLTNGVGLAPILQVMYFYFPKC 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + ++ EL + +G TL+ P++ L + S+ +F E+ Sbjct: 61 ISFAMPLGVLFAGAYTMGTLYARNELTSVFASGMPIWTLVLPLVILGFIFSVGMFFFEDR 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + +L+AK + + ++ + Y+ + R Sbjct: 121 VVIHTQYKKNRLTAKLLETDKDLSTNDIVVLSENNKIIYSAEVYDAETKNLLNLQIIVRT 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + A L V+ S + K + N + Sbjct: 181 DDGEIEKVVTTAVAIWEGDAWELTKPAVYIFSKNGQIQFTDKLAAKEFTEAPENFQRNIT 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 ++ ++S +++++R + + S+ + Sbjct: 241 SIDELSVSE-AATYIQKLKRTGRPYTEELAQYYRRFSFPFTIFLVLFFSVSVGGRFRKNI 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + ++ + + +P +L +F SIFLL K Sbjct: 300 LLMSLLFSLLIATVYYVTEMVTMLLAKWEYISPLAGALLPFLIFTSLSIFLLRHAK 355 >gi|218885480|ref|YP_002434801.1| permease YjgP/YjgQ family protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756434|gb|ACL07333.1| permease YjgP/YjgQ family protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 379 Score = 90.8 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 45/340 (13%), Positives = 104/340 (30%), Gaps = 9/340 (2%) Query: 27 AWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTEL 86 + + LQ L L + + YL P + +V P + M+ + EL Sbjct: 16 VLIGRGLQLRELFLGLDLGLADAVLLFVYLTPFFMLLVVPVACMLSVFLTFLRMSTDREL 75 Query: 87 LIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLE 146 + + G S ++ L +L ++ + + + ++ Sbjct: 76 VALKAGGVSLYQMLAAPLLFCVLCTLLTLGISLQGLAWGMANFRATVMDIANSRARVVVQ 135 Query: 147 ENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR-DTQTHKIYYAQSGSIDLDRQAI--IL 203 +F + L + + +P + IV+ R + A +G+I D + Sbjct: 136 PGVFNKDIPGLTLFARQVDPADNRLSQVIVEDRSREDSTLTILAPTGAIATDEARGELLF 195 Query: 204 NDGEVHRKSPISKDISIMKFKSY----TLQTESANSSTIVLKANDQNLSFLLNPNPNNPN 259 + +S++ F Y L +K + + L ++ Sbjct: 196 RLQNGRLYKTEGQQVSVLGFGEYVVRIDLGLMFKGLDLGRVKPKELSWEQLRALPLDDGK 255 Query: 260 YR--PELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFG 317 +LL E HKR ++ GL ++ A + ++ + + + + Sbjct: 256 GNVDDKLLRKVAVEVHKRWVFPAACLVLGLFAMPLACAFEGLHRQFGVVLALLMFLVYYS 315 Query: 318 VFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + P LF + ++ L + + Sbjct: 316 LLSFGLTTGEAGTIAPEVGLWTPNVLFLGAGLWGLRLAAR 355 >gi|319788014|ref|YP_004147489.1| permease YjgP/YjgQ family protein [Pseudoxanthomonas suwonensis 11-1] gi|317466526|gb|ADV28258.1| permease YjgP/YjgQ family protein [Pseudoxanthomonas suwonensis 11-1] Length = 361 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 50/364 (13%), Positives = 128/364 (35%), Gaps = 15/364 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+LR +SFL + + ++ ++ ++ + ++ +LL G + Sbjct: 1 MPKLDRYLLRDFVQSFLATLIVLLTVSLGGVLVDVLGEIADGGLPARLLLSQLGLQLLVY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP+V P + + + R++E+ +++ G L++P+L + + + + + Sbjct: 61 LPLVLPLALMLGLMLAVARLYRDSEMAVLNAVGVGPKRLLRPLLMAVVPVVVAVGMCSLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFR-LDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P + T + +A +L + LE F + + I + + + Sbjct: 121 LGPWAQRTAANMIEQANRSLIVAGLEPGRFTSLPNGGGIVYIDGMSEDGRTLQGVFLQRE 180 Query: 180 DTQTHKIYYAQSGSIDLD---RQAIILNDGEVHRKSPISK-DISIMKFKSYTLQTESANS 235 + A++GS++ + + L DG D +M++ + Sbjct: 181 RDGRVDVVTARTGSLEFGGDRDRFLRLADGRRLEGPLEQGLDFRLMRYAVNEVALPDRAE 240 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 L N + +E H RLT L + F L+++ A Sbjct: 241 ERADDDPAIAPTLSLFN----------DGRPAAIAELHGRLTPPLMALAFALLTVPLARS 290 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 ++ ++ F++ + + + ++ + +I+L + Sbjct: 291 SPRQQRYGRLMLGFLAYLVGLNLMFIGVRMLADGKLPAPVGLWWLTLPLMALAIWLYLRD 350 Query: 356 KKYT 359 + Sbjct: 351 GRLP 354 >gi|325473492|gb|EGC76687.1| membrane protein [Treponema denticola F0402] Length = 357 Score = 90.4 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 49/356 (13%), Positives = 112/356 (31%), Gaps = 2/356 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + Y+L+ +F+++ LF V + + + I + ++K+ IP Sbjct: 1 MRLLQRYLLKLFIPTFVVAMLFFVLLLQLGDLFANIVAYLQNGAQFKDIVKVMWLYIPKC 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + ++ EL I + G S P+L L S+ + E+ Sbjct: 61 IAYSVPLAILFAGSYTMGNLYAQNELTSIFSAGISLGRFTLPLLVLGFFFSVGMIFFEDN 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + K QLS K ++ + + +N N + RD Sbjct: 121 VVIKYFYEKTQLSKKLLQEEESLDTQDLVILSELGKIVYTADYFNAENQTLANAYIIVRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + +S + + + EV+R + + + +E + L Sbjct: 181 EDGNLSLVIKSSHMVWNEDRWTTDSAEVYRFDEKNSVSCLNNIPDNIILSEPPANFQKNL 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + D+ S++H+R + I SI + Sbjct: 241 SSVDEMRISEAKEFIAALKKNGLPYYEALSKYHRRFSFPFTIFIVLFFSISLG--GKFKK 298 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + +F + ++ + + + +F S + + ++KK Sbjct: 299 NILLMSILFSLGIATLFYVTEMVTMLSAKWEYISPLAGAWTPIFIFSILSVYLLKK 354 >gi|260434859|ref|ZP_05788829.1| unclassified ABC-type transport system permease [Synechococcus sp. WH 8109] gi|260412733|gb|EEX06029.1| unclassified ABC-type transport system permease [Synechococcus sp. WH 8109] Length = 387 Score = 90.4 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 42/331 (12%), Positives = 108/331 (32%), Gaps = 20/331 (6%) Query: 32 ILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDN 91 + + + + + I ++ IP L P M + V T ++ N EL + + Sbjct: 46 MFELVRQMVDKNLPITIAAQVLFLSIPRWLAFSVPIGTLMASLFVFTRLSANNELTALRS 105 Query: 92 TGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFF 151 G + +I + L++ +++F F +++ P+ + + + E++ + Sbjct: 106 LGITTKRMISAAIALSMAMTLFSFFLNDVVVPRSERYAEVNLKRGLGQAIANKTGEDIIY 165 Query: 152 RLDDDLYI-------------KISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDR 198 S + ++ + ++D + ++ A + D+ Sbjct: 166 PRFGRRTGIDGKSADRGLLQLFYSWKFQDGEMKDVTVLDFSRSGITQLLRADRAIWNDDQ 225 Query: 199 QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST--IVLKANDQNLSFLLNPNPN 256 DG + + + + FK Y +SA I A + ++ L Sbjct: 226 TGWDFLDGHILTLTA-NGSSTKADFKRYLYPLDSAPQRLAGIEEDAVNMTVAEALQAQRL 284 Query: 257 NPNYRP-ELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSIS 315 + R ++ T + ++FGL + R + + + Sbjct: 285 YEESGSIKEARKIRVRIQEKFTVPMACLVFGLFGATLGAQPTYRTSRSFSFVLTLGI--- 341 Query: 316 FGVFWGFSYIIHKIEQNPYYIPILYLFLFCI 346 +++ + + PIL +L + Sbjct: 342 IAIYYVIGFSFSSLGVKGTLSPILAAWLPVV 372 >gi|222085452|ref|YP_002543982.1| permease protein [Agrobacterium radiobacter K84] gi|221722900|gb|ACM26056.1| permease protein [Agrobacterium radiobacter K84] Length = 361 Score = 90.4 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 51/354 (14%), Positives = 117/354 (33%), Gaps = 11/354 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTV 60 + Y + L L + + ++I + ++ ++ I L ++ +P + Sbjct: 4 STLGRYFFTRYIITTLWFFLGVTSLVYLIDFSETAGRLAGLPGYTVKIGLLMTAVRLPFI 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + PF VL ++NR EL+I G S + P + A + + ++ N Sbjct: 64 MQQTVPFIALFVGMTVLIALNRRRELVIARAAGISVWQFMTPFVVGAFCVGLLTMLALNP 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD---DLYIKISKYNPNNTLQGIFIVD 177 + + + + A + ++ + R D D+ I N T + Sbjct: 124 VAAWGQRQAETMEADLRGDPSYRNTLSIPWLRQSDGKSDIIIGAKAVLDNGTTLMNVVFI 183 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 D+Q + I + S L+ +LN + + + S Sbjct: 184 HFDSQGNIILRQDAQSAKLENGYWLLNSVVER---APGEIPAHKSTTQVRTNLKQDFVSE 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + L N + ++FH L+Q V LI+ + K + Sbjct: 241 RLAQPETIAFYDLSNR-IAIAKSFGISTKALETQFHSLLSQPFLLVAMTLIAATVSLKFS 299 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 Q + + + +S V + + ++ + P + ++ I ++ Sbjct: 300 RFNQSR---SVILGGILSGFVLYVVTVLVKAFGSSGVVPPFVATWIPVIVALAF 350 >gi|152973138|ref|YP_001338284.1| putative transmembrane protein, transport [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238892750|ref|YP_002917484.1| putative transport system transmembrane component [Klebsiella pneumoniae NTUH-K2044] gi|262045294|ref|ZP_06018319.1| inner membrane protein YjgP [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|290512174|ref|ZP_06551541.1| transmembrane protein yjgP [Klebsiella sp. 1_1_55] gi|330016471|ref|ZP_08308444.1| lipopolysaccharide export system permease protein LptF [Klebsiella sp. MS 92-3] gi|150957987|gb|ABR80017.1| putative transmembrane protein, transport [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238545066|dbj|BAH61417.1| putative transport system transmembrane component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259037350|gb|EEW38596.1| inner membrane protein YjgP [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|289775169|gb|EFD83170.1| transmembrane protein yjgP [Klebsiella sp. 1_1_55] gi|328528832|gb|EGF55775.1| lipopolysaccharide export system permease protein LptF [Klebsiella sp. MS 92-3] Length = 365 Score = 90.4 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 53/361 (14%), Positives = 124/361 (34%), Gaps = 19/361 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G IP + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPTNLVLSLLGLGIPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ LIK + LA+ ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLIKAAMILALFTGAVAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + D + + N +F+ R Sbjct: 122 PWSSRHQDEVLAEAKANPGMAALAQGQFQQASDGNAVMFIESVNGNRFHDVFLAQLRPKG 181 Query: 183 T--HKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + + Q + LN G + + +D I F +Y S Sbjct: 182 NARPSVVVADSGELSQQKDGSQVVTLNKGTRFEGTAMLRDFRITDFNNYQAIIGHQAVSA 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 ++ L + R+E H R T I L+ Sbjct: 242 DPDDTEQMDMRTLW----------KTHTDRARAELHWRFTLVATVFIMALM---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ ++ + ++ + F + I + P ++++ + L ++ Sbjct: 289 VNPRQGRVLSMLPAMLLYLVFFLLQTSIKSNGGK-GKMDPAIWMWAINLLYFALAVLLNL 347 Query: 358 Y 358 + Sbjct: 348 W 348 >gi|52842836|ref|YP_096635.1| permease [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629947|gb|AAU28688.1| permease [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 333 Score = 90.4 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 42/344 (12%), Positives = 111/344 (32%), Gaps = 22/344 (6%) Query: 28 WVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELL 87 Q +Q +N +S + +++K+ +P ++ ++ P F + + +E+ Sbjct: 1 MSNQFIQYLNRAASGSIPGFVIMKLLMLELPNLMGLLLPLGFYVALLLAYGRLYAESEMT 60 Query: 88 IIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEE 147 ++ G L+K +A ++ + + I P +L + + Sbjct: 61 VLRACGYGPRQLLKHSFAMATVVLVVVAIVMIWASPVIAVERIKLIRSTGIKTLIQTIMP 120 Query: 148 NLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYY---------AQSGSIDLDR 198 F ++ I + + Q I ++ + + Sbjct: 121 GRFHAINSGQQIFYVQSMNRDHSQAEQIFMAKHSVQDNRLLWDVLWADKAFAEVNPQTGE 180 Query: 199 QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNP 258 + I+L +G+ ++ P D I +F SY + + + A L N ++ Sbjct: 181 EYIVLQNGKEYQGVPGHADYQIAEFASYKSKLPNPTV-VMHDDARTAKTRDLWPLNNHDL 239 Query: 259 NYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGV 318 +E R++ L + L+++ + + K + ++ I Sbjct: 240 KKA--------AELQWRISIPLMVLTLTLVAVPL---SRVSPRSGKYSKLLPAIIIYIFY 288 Query: 319 FWGFSYIIHKIEQN-PYYIPILYLFLFCISSIFLLMIKKKYTKI 361 I + ++ ++ + +L I + K+ Sbjct: 289 ANFMFVSRDAIATGKIPWWIGMWWVHVAVAILGILFIWRNQVKL 332 >gi|73542370|ref|YP_296890.1| permease YjgP/YjgQ [Ralstonia eutropha JMP134] gi|72119783|gb|AAZ62046.1| permease YjgP/YjgQ [Ralstonia eutropha JMP134] Length = 383 Score = 90.4 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 53/361 (14%), Positives = 122/361 (33%), Gaps = 23/361 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 ++ +E Y R + F+ ++ + +L + V + + I PT Sbjct: 4 LRVYERYFARQVYGVFVFILFAVLSLFVFFDLLSELENV-NGKYTSLIAFVHVLLQAPTR 62 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + V + + +E I G + + + LA+ L++ FI Sbjct: 63 IYEVLPIAVLISAIYVFSQLASQSEYTIFRVAGLNTRQALFSLFKLAVPLALITFIFGEF 122 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD--------LYIKISKYNPNNTLQG 172 I P+ +++ +A A S ++ + D ++ ++ P+ T+ G Sbjct: 123 IGPRAEQFAQKIKLEAIGATVSSGFRSGVWVKDRDKDPAGGEITRFVNVAGLRPDQTITG 182 Query: 173 IFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSP-------------ISKDIS 219 I + + ++ Q+ +L+D R S Sbjct: 183 ITVYEFDAQYRLRVIRVVKEGRYQGAQSWLLSDVNETRFSELRQPGTASRDGLAPEFRAE 242 Query: 220 IMKFKSYTLQTE-SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQ 278 ++F S T+ +E + +++L ++ + L + + + Y F K++ Sbjct: 243 QVRFPSVTMHSELTPQILSVLLVTPERMSTLDLFRYIRHLRDNKQDTQRYEIAFWKKVVY 302 Query: 279 WLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 L + +++ A A I L +SF + + + P + Sbjct: 303 PLTLFVMMALALPFAYLHARAGAVGVKVFGGIMLGLSFHLSNTLFSHVGLLHTWPPIVSA 362 Query: 339 L 339 L Sbjct: 363 L 363 >gi|288937433|ref|YP_003441492.1| permease YjgP/YjgQ family protein [Klebsiella variicola At-22] gi|288892142|gb|ADC60460.1| permease YjgP/YjgQ family protein [Klebsiella variicola At-22] Length = 365 Score = 90.4 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 52/361 (14%), Positives = 125/361 (34%), Gaps = 19/361 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G IP + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPTNLVLSLLGLGIPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ LIK + LA+ ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLIKAAMILALFTGAVAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + D + + N +F+ R Sbjct: 122 PWSSRHQDEVLAEAKANPGMAALAQGQFQQASDGNAVMFIESVNGNRFHDVFLAQLRPKG 181 Query: 183 T--HKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + + Q + LN G + + +D I F +Y ++ Sbjct: 182 NARPSVVVADSGELSQQKDGSQVVTLNKGTRFEGTAMLRDFRITDFNNYQAIIGHQAVTS 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 ++ L + R+E H R T I L+ Sbjct: 242 DPDDTEQMDMRTLWQT----------HTDRARAELHWRFTLVATVFIMALM---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ ++ + ++ + F + I + P ++++ + L ++ Sbjct: 289 VNPRQGRVLSMLPAMLLYLVFFLLQTSIKSNGGK-GKMDPAIWMWAINLLYFALAVLLNL 347 Query: 358 Y 358 + Sbjct: 348 W 348 >gi|300023218|ref|YP_003755829.1| permease YjgP/YjgQ family protein [Hyphomicrobium denitrificans ATCC 51888] gi|299525039|gb|ADJ23508.1| permease YjgP/YjgQ family protein [Hyphomicrobium denitrificans ATCC 51888] Length = 364 Score = 90.4 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 48/359 (13%), Positives = 119/359 (33%), Gaps = 10/359 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSST-ESLNILLKISGYLIPTVL 61 + YI R + + + + ++I ++ + + LL+I+ +P + Sbjct: 6 TLTRYIARMFIVAIVTTLTVCALLIFMIDFVELLRMAGKYGAVPGTTLLRIALLRLPAYI 65 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + F + + + L +NR +EL ++ G S + P LF+ + + IF N + Sbjct: 66 EFLIGFAVLVGSISALIYLNRKSELAVMRAGGMSVWQFLGPGLFVGLAVGIFAMAVFNPL 125 Query: 122 EPKCRS-----TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + R+ K +A L D + + + + +V Sbjct: 126 ASRGRATSEKLYAKAFGNEANLLRAQGGGSWIRQNGADGESVLGAAAASNQGLTLTGVLV 185 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + D + H +GS +L L D V R + +Y ++ Sbjct: 186 FAYDREGHFSERIDAGSAELKDGYWELQDAWVTRLGQEPEKFKSYLLSTYLTPDRVQDAL 245 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + +L L+ + E R ++ L + + + L++ + + Sbjct: 246 GTVFSISFWDLPELIQA----ADKAKLSTERLRVQYQSLLVRPMLCLAMVLLAATVSLRS 301 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + + + F + + I P ++ + ++ +++ Sbjct: 302 FRSGGIQTMVATGMIGGVGFFLLSEIARQIGIAGLAPAWVAAWMPVVLVLAISTTVLLH 360 >gi|78212778|ref|YP_381557.1| permease [Synechococcus sp. CC9605] gi|78197237|gb|ABB35002.1| possible permease [Synechococcus sp. CC9605] Length = 386 Score = 90.1 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 42/331 (12%), Positives = 115/331 (34%), Gaps = 20/331 (6%) Query: 32 ILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDN 91 + + + + + I +++ + IP L P M + V T ++ N+EL + + Sbjct: 45 MFELVRQMVDKNLPITIAVQVLLFSIPRWLAFSVPIGTLMASLFVFTRLSANSELTALRS 104 Query: 92 TGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFF 151 G + + +I L L++++++F F+ +++ P+ + + ++ S ++ + Sbjct: 105 LGITTVRMISAALALSMVMTLFTFVLNDVVVPRSQRYAEVTLKRSLGRSLASETGRDIIY 164 Query: 152 RLDDDLYI-------------KISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDR 198 + S+ + + + ++D + ++ A + D+ Sbjct: 165 PRFGTRFDSDGEEDGKGLNQLFYSRKFQDGEMADVTVLDFTRSGFTQMLRADRAIWNEDQ 224 Query: 199 QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST--IVLKANDQNLSFLLNPNPN 256 + DG++ + + F Y S I A + ++ L Sbjct: 225 ASWDFLDGQILTL-AANGSSTKADFDRYVYPLGSGPVRLAGIEKDAVNMTVAEALQAQRL 283 Query: 257 NPNYRP-ELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSIS 315 + R ++ T + ++FGL + + R + + + Sbjct: 284 YEEAGSIKEARKIRVRIQEKFTVPMACLVFGLFGATLGAQPSYRSSRSFSFVLTLGI--- 340 Query: 316 FGVFWGFSYIIHKIEQNPYYIPILYLFLFCI 346 V++ + + PIL +L + Sbjct: 341 IAVYYVIGFSFSSLGVKGTLPPILAAWLPVM 371 >gi|206577932|ref|YP_002240777.1| putative permease [Klebsiella pneumoniae 342] gi|206566990|gb|ACI08766.1| putative permease [Klebsiella pneumoniae 342] Length = 365 Score = 90.1 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 53/356 (14%), Positives = 120/356 (33%), Gaps = 17/356 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G IP + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPTNLVLSLLGLGIPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ LIK + LA+ ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLIKAAMILALFTGAVAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + D + + N +F+ R Sbjct: 122 PWSSRHQDEVLAEAKANPGMAALAQGQFQQASDGNAVMFIESVNGNRFHDVFLAQLRPKG 181 Query: 183 T--HKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + + Q + LN G + + +D I F +Y ++ Sbjct: 182 NARPSVVVADSGELSQQKDGSQVVTLNKGTRFEGTAMLRDFRITDFNNYQAIIGHQAVTS 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 ++ L + R+E H R T I L+ + + Sbjct: 242 DPDDTEQMDMRTLWQT----------HTDRARAELHWRFTLVATVFIMALMVVPLSVVNP 291 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 RQ + + + L S + + ++ ++ +L+ Sbjct: 292 --RQGRVLSMLPAMLLYLVFFLLQTSIKSNGGKGKMDLAIWMWAINLLYFALAVLL 345 >gi|332969352|gb|EGK08377.1| YjgP/YjgQ family permease [Kingella kingae ATCC 23330] Length = 370 Score = 90.1 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 51/365 (13%), Positives = 137/365 (37%), Gaps = 20/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ ++ + ++ I Q + + +S + +++ + + G+ + + P Sbjct: 2 IYKKQFIKETTLVAIGIFSVVLAILLFTQGVNMLGRAASGSVAIDAVGALIGFWVLGMTP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT R++E+ I ++G IKPVL A+ L++ + + + Sbjct: 62 LLLVLTAYISILTVLTRYWRDSEMAIWLSSGLGLKQWIKPVLTFALPLAMLVAAMQLFVL 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFR---LDDDLYIKISKYNPNNTLQGIFIVDSR 179 P ++ + S +E+ F ++ +Y + +FI + Sbjct: 122 PNAELRSREYGELLKQKQNLSLIEQGTFAELGKQNNRVYFVEQFDAEVGEMSRLFIREVD 181 Query: 180 DTQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + +AQSG + +R+ ++L +G + + D + F+ L +A Sbjct: 182 EKGRDSVVFAQSGHMKLEADNRRVLVLQNGYRYTGNAGQGDFEQVSFQELQLVINTAPKL 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + S N Y++E R++ + ++ L++I Sbjct: 242 IEPINHRRTIPSQ---------NLIGSDNPQYQAELMWRISLPITVILLSLLAIPI---S 289 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMI 354 + + + +++ G + + + + P++ +L + + + IF+LM Sbjct: 290 YFNPRTGNSYHVVVAVGFFLFYQNGLTLLRDAVEDGKIPFWAGLLPMHIIMAACIFVLMK 349 Query: 355 KKKYT 359 + Sbjct: 350 MRSMP 354 >gi|319762860|ref|YP_004126797.1| permease yjgp/yjgq family protein [Alicycliphilus denitrificans BC] gi|330824940|ref|YP_004388243.1| permease YjgP/YjgQ family protein [Alicycliphilus denitrificans K601] gi|317117421|gb|ADU99909.1| permease YjgP/YjgQ family protein [Alicycliphilus denitrificans BC] gi|329310312|gb|AEB84727.1| permease YjgP/YjgQ family protein [Alicycliphilus denitrificans K601] Length = 364 Score = 90.1 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 37/343 (10%), Positives = 117/343 (34%), Gaps = 16/343 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ I + + RSF + + ++ + + +++ + S + + + ++ + G+ + L Sbjct: 2 LFDSSIRKELARSFGATLVVLITVVMTMMLIRVLGQASRGSVAPSDVMLVMGFTVLGQLS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + + L+ M R++E++I + G ++L+ P+L + + + + ++ Sbjct: 62 TILSLSLFVTVVGTLSRMYRDSEMVIWFSAGRGLLSLLAPLLRFSWPIMLAIAALSLVVW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P I++L + + + F + + + + + + + Sbjct: 122 PWANRQIQELKTQYEQRSDVDRVAPGQFQESSNGSRVFFIDKDTPDANAASNVFIATNEA 181 Query: 183 THKIYYAQ---SGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + I + +L++G+ + I +F Y +S + S Sbjct: 182 HRETITSAQSARIEIRNGERLALLHNGQRLETMLDKPGLRISEFTEYGTLIDSGSQSDPE 241 Query: 240 LK-ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 ++ L + +++E RL + F ++ + A Sbjct: 242 AGAIKTRDTWDL----------ARDPSPRHQAELGWRLGLAFAALNFVVLGLAVAIVNPR 291 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL 341 + + + + + + I +P + Sbjct: 292 AGRSTSLAFALFAFMVYYNLMTVGQAWIGAGRFG--LVPFMLA 332 >gi|93004884|ref|YP_579321.1| permease YjgP/YjgQ [Psychrobacter cryohalolentis K5] gi|92392562|gb|ABE73837.1| permease YjgP/YjgQ [Psychrobacter cryohalolentis K5] Length = 428 Score = 90.1 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 46/393 (11%), Positives = 118/393 (30%), Gaps = 53/393 (13%) Query: 11 CIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFA 70 + + + F+V + ++++ + + + +L I GY +P L ++ P F Sbjct: 4 QVASTTALVLGFLVVMMLGGRLIRYFGIAAEGNLDIGLLFTIIGYNLPYFLELILPLAFF 63 Query: 71 METTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIK 130 + V + + E+ +I+ +G SR L + + L + L + + +P + + Sbjct: 64 IALMLVFGRLYVDQEMAVINASGVSRGRLGRLMTPLILALFVGEAALSIVGKPWGVRSSE 123 Query: 131 QLSAKAQLALTFSYLEENLFFRLDDDLYI------------------------------- 159 + + L F + N F + Sbjct: 124 NVWQQQALTSAFDLIRPNQFISSGNYHLYVGSLSDDKKQLQDVILIQSEPEKKGSGAKNN 183 Query: 160 -------------KISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAII---- 202 + N + + + + I A+ + + Sbjct: 184 TAKNSAMDLENNIDVETTEQLNIPELPTALANNNISKDTITLAKRAEQVDTGNSGVTQLD 243 Query: 203 LNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAND-QNLSFLLNPNPNNPNYR 261 L G + S + + F Y + ++ I + Q + L N Sbjct: 244 LFQGRRYEVGAGSLKYNQVGFDRYRITLTESSKEVITEDNIETQAIGPLWQAATGNAQVG 303 Query: 262 PELLETYRS-EFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFW 320 E RL+ +I ++++ A + ++ + +F S+ + Sbjct: 304 SNNAMRAAQGELGYRLSLPWLMIIAPMLAVPLA---QVRPRQGRWLRLFPSILLFVSCAL 360 Query: 321 GFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 G + + + + + + ++ L M Sbjct: 361 GIISLKNAVGKGSVSVWAYAWLILGFMALALYM 393 >gi|124025509|ref|YP_001014625.1| putative permease [Prochlorococcus marinus str. NATL1A] gi|123960577|gb|ABM75360.1| possible permease [Prochlorococcus marinus str. NATL1A] Length = 395 Score = 90.1 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 58/368 (15%), Positives = 132/368 (35%), Gaps = 19/368 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQ-ILQRINLVSSSTESLNILLKISGYLIPTVL 61 + +IL + S ++ + I I + ++ ++I +P+ + Sbjct: 24 LLDRWILFELLPPLFFSIAAFTVVSLSVGVIFDLIRKIVEIGLPFSVAIQILLLKLPSFI 83 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + T S+N N+E+ + + G S +I P L L+I +S FI N I Sbjct: 84 VISFPMAMLLSTLLAYGSLNDNSEIKALKSIGISVYRIILPGLILSIAMSYMTFIFNNNI 143 Query: 122 EPKCRSTIKQLSAKAQLALTFSYL-------------EENLFFRLDDDLYIKISKYNPNN 168 P + + A + + + ++ + ++ + + Sbjct: 144 VPNTNKNAEIILANSLGRSFANEQGEDIIFSKKGEILDPYSSYKKNGVTHLFYAWKFIDG 203 Query: 169 TLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 + + ++D ++ A+ G + D+ +G++ SP + + KF S+ Sbjct: 204 QMLDVTVIDFSKLGFTQMLKAKKGIWNSDKNNWEFFEGDILTLSPDGSN-TRTKFLSFLY 262 Query: 229 QTESA--NSSTIVLKANDQNLSFLLNPNP-NNPNYRPELLETYRSEFHKRLTQWLFPVIF 285 + N + + +ND NL + + + ++ T + +F Sbjct: 263 PLGTELTNIAQLPKDSNDMNLGEANTAMKLYQSSGNIKEARRMKVRIQEKFTLPIACSVF 322 Query: 286 GLISIVAADKRAL-VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 LI + + + I + I + + + FS + K NP++ +FL Sbjct: 323 ALIGCSFGVMQKSGGGRSQSFGLSIILILIYYILSFSFSSLGVKGIINPFFAAWSPVFLS 382 Query: 345 CISSIFLL 352 + FLL Sbjct: 383 MLGGGFLL 390 >gi|27379217|ref|NP_770746.1| permease [Bradyrhizobium japonicum USDA 110] gi|27352368|dbj|BAC49371.1| bll4106 [Bradyrhizobium japonicum USDA 110] Length = 363 Score = 90.1 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 48/359 (13%), Positives = 117/359 (32%), Gaps = 13/359 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTV 60 + Y + L I + ++ ++ + S ++ S ++ + S + +P + Sbjct: 4 NTLGRYFAGRFVVAALGVFASIFLLLVLVDYIEMVRKTSGLASASAIMVAETSLFRVPQL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L +TPFC + +++R EL++ G S I P L A+L+ + ++ N Sbjct: 64 LEKLTPFCMLIGAMTCYLALSRRLELVVARAAGVSAWQFISPALGSALLIGVIATVAYNP 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFR-----LDDDLYIKISKYNPNNTLQGIFI 175 + R K++ A+ + +++ F D I ++ Sbjct: 124 MSANLRELSKRMEAELFGSAPGGGIQDASGFWLNQVTNDGQTIINAARSEQQGVRLTGLT 183 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + DT+ H ++ +L+ I + + +++ + A Sbjct: 184 LFRFDTEQHFKERVEAREAELEVGQWIFRNVRRFSLDGPPIEQAVLAIPTT---LTEAQV 240 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + L + + YR ++HK L Q +++ + Sbjct: 241 RNSFSTPETVSFWQLPS-YIRSSESSGFATAGYRLQYHKLLAQPFLLAAMVMLAASVSL- 298 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R + + F ++ S + + + PI +L + + Sbjct: 299 -RFFRMGGVQKMVLSGVGAGFLLY-VLSKVTEDLSKAELMHPIAAAWLPVVVGGLTGFL 355 >gi|291614865|ref|YP_003525022.1| permease YjgP/YjgQ family protein [Sideroxydans lithotrophicus ES-1] gi|291584977|gb|ADE12635.1| permease YjgP/YjgQ family protein [Sideroxydans lithotrophicus ES-1] Length = 377 Score = 90.1 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 46/360 (12%), Positives = 119/360 (33%), Gaps = 19/360 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F ++R + L+ ++ I Q+++ + S +++ +L + G+ LP Sbjct: 20 IFYWALVREFASTGLLVSSILLGIVVFTQLIRLLGESVSGMLAVDGVLAMLGFTSLNYLP 79 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + L+ R++E+++ +G I+PVL AI +++ + + ++ Sbjct: 80 VLLSISLFLSVLLTLSRSYRDSEMVVWFTSGIGLTRWIRPVLGYAIPVTLLIALLSLVLS 139 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P S + + S +F + + + + I Sbjct: 140 PWALSKADEFKRRLDSRDDVSAATPGVFRESKQADRVFFLEDVDSQKKRVGNIFVQSTQN 199 Query: 183 THKIYYAQSGSID----LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + +++ +G + P D I++F+ Y ++ E A Sbjct: 200 GKEGTMVAKEGYQETAPNGDRFLVMLNGTRYEGIPGRADFRIVEFERYAMRIEPAELRED 259 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + + +LL SE R+ L +I ++A + Sbjct: 260 LPHLQAFSTLYLL----------QNPTAWNLSELEWRIGLPLSALILS---LLAIPLSYV 306 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMIKK 356 + + + ++ I S + + +L + L + +L + Sbjct: 307 NPRAGRSLNLIAAMVIYMFYNNMISVTNSWVARGKISPSAGLLGIHLLMFGVMLVLFYHR 366 >gi|329894347|ref|ZP_08270217.1| putative permease [gamma proteobacterium IMCC3088] gi|328923143|gb|EGG30466.1| putative permease [gamma proteobacterium IMCC3088] Length = 353 Score = 90.1 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 35/337 (10%), Positives = 99/337 (29%), Gaps = 5/337 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + Y+ + + + L +V + + ++ + + ++ + + L +P Sbjct: 1 MRLLDRYVGMQVIYATCLVLLVLVGLDALSALIDELQDLKAN-YTFSKALLYVAASVPAR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + L + +EL++I G S L++ ++ ++ + + I Sbjct: 60 IVELAPIGILIGVLVALGQLASTSELVVIRGAGLSSWHLLRILMKPVLVFAGLMLIMGEF 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + PK + A A ++ R + + Sbjct: 120 VVPKSEQFGEAERALALSNKGSITGRYGMWNREGRHFIHFNAVQAGGVIYGVTLFTFDDN 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + H+ A + +L + + + + S + + L Sbjct: 180 WRLHESMSANRATFQRAG--WLLENVQRTQVNSWGSQTSEHTTLLWETDLTPDLLAMESL 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 +++ L + Y ++LTQ L + L+++ Sbjct: 238 SPERLSINGLFQ-YSQYLKQQGLESADYEVAAWRKLTQPLAIFVLVLVAMGFIFGPLRDG 296 Query: 301 QRKKIHPIFISLSISF-GVFWGFSYIIHKIEQNPYYI 336 I + + F + + +P Sbjct: 297 TLGLRVFIGTLVGLVFKISQDVVASVTIVYGISPALA 333 >gi|154253776|ref|YP_001414600.1| permease YjgP/YjgQ family protein [Parvibaculum lavamentivorans DS-1] gi|154157726|gb|ABS64943.1| permease YjgP/YjgQ family protein [Parvibaculum lavamentivorans DS-1] Length = 363 Score = 90.1 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 37/338 (10%), Positives = 95/338 (28%), Gaps = 15/338 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTVL 61 + Y+ R L++ + + ++I++++ + + + +++ I+ +P + Sbjct: 6 TLSRYLGRQFLGVVLLTFGVFIVLIFMIELVELLRRSADKPDVTFGLVVTIALMEVPRIG 65 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PF ++RN EL++ G S I P L +A ++ F+ N + Sbjct: 66 AQTLPFAVLFGGMAAFLRLSRNNELVVARAAGVSVWQFIAPALAVAFVIGAFVTTVFNPV 125 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFR------LDDDLYIKISKYNPNNTLQGIFI 175 + +QL +K + + + + Sbjct: 126 SATLTTRAEQLESKYLSRQASFVAVSANGLWLRQADSTGQSVVHALRMDDGFRLRRVTIF 185 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + + + A + + L D V + Sbjct: 186 LYDQGNRFSGRIDAATARLRPG--YWELADVWVMM---DGEQSRKYDTYRQETSLTQKQI 240 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + + L + Y+ FH+ L LI+ + Sbjct: 241 EESFAREESISFWELPH-FIATAEAAGFSARRYQIYFHQLLATPALLCTMVLIAAAFSL- 298 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP 333 + R + + + F +++ + I Sbjct: 299 -RVTRMGGLLQMVLGGIFSGFLIYFLGNLAIALGLSGI 335 >gi|187922983|ref|YP_001894625.1| permease YjgP/YjgQ family protein [Burkholderia phytofirmans PsJN] gi|296162275|ref|ZP_06845069.1| permease YjgP/YjgQ family protein [Burkholderia sp. Ch1-1] gi|187714177|gb|ACD15401.1| permease YjgP/YjgQ family protein [Burkholderia phytofirmans PsJN] gi|295887429|gb|EFG67253.1| permease YjgP/YjgQ family protein [Burkholderia sp. Ch1-1] Length = 382 Score = 89.7 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 41/375 (10%), Positives = 109/375 (29%), Gaps = 25/375 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRIYERYFARQIYLTFIFILFAFSGLFFFFDLINELNSVGHGNYKFQYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + I L + ++ + Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEYTIFRVSGLATNQALRSLLKIGIPLVLLTYLIGEV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRL---------DDDLYIKISKYNPNNTLQ 171 + P +++ +A + S E ++ + ++ + + P+ T+ Sbjct: 121 VGPYTDQLSERVRLEALGSSVSSNFESGVWVKDTLTARADGEQVTRFVNVGELKPDATIS 180 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRK-----------SPISKDISI 220 + I + L + ++ Sbjct: 181 NVRIYEFDSKFRLSNVRTAKSGKYQPPGHWQLTGVTDTQLIDVPPPPGTPADALNPVYRA 240 Query: 221 MKFKSYTLQTE---SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLT 277 + + +++L + D+ F L + + + Y ++L Sbjct: 241 KEVAVPEYSLRSELTPQILSVLLVSPDRMSMFNLFRYIQHLTENHQDTQRYEIALWRKLL 300 Query: 278 QWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP 337 + ++S+ A R +F + + + H N + P Sbjct: 301 YPFAVFVMLVLSLPFAYL--HTRAGVVGMKVFGGIMLGMSFQLFNTLFSHIGTLNTWPAP 358 Query: 338 ILYLFLFCISSIFLL 352 + + + L Sbjct: 359 LTAATPGLVYLVLGL 373 >gi|149927924|ref|ZP_01916174.1| YjgP/YjgQ like transporter [Limnobacter sp. MED105] gi|149823363|gb|EDM82596.1| YjgP/YjgQ like transporter [Limnobacter sp. MED105] Length = 401 Score = 89.7 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 41/374 (10%), Positives = 110/374 (29%), Gaps = 27/374 (7%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y + ++ + V + ++ ++ +S S +P + + P Sbjct: 14 YFRSELYKAISFVMVAFVGLFAFFDLIAEVDRLSLPGTSWFYYFVAVLLGLPARVYEIAP 73 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + + L + ++EL + G S +++K ++ +A + + + + P Sbjct: 74 IAALIGSIYALVQLAASSELTAMRAAGLSTTSMLKMLVRIAAGVVVITVLFGEAVAPLAE 133 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDD---------DLYIKISKYNPNNTLQGIFIVD 177 + AKA + R S L+ + Sbjct: 134 RAAVPMRAKALGYEVDRDFRSGYWMRDTYSAPDAESRVRFVNFDSFNKDGELLKLEYYEL 193 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRK---------------SPISKDISIMK 222 +++ A+S D D L + V R + + + ++ Sbjct: 194 DPESRIRAWVRAESAKFDPDSGDWELRNVLVQRYFDEAVSNANAARAGLTIQASEFESLE 253 Query: 223 FKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFP 282 +T + + ++ + + L N + + + + F K++ Sbjct: 254 TMRWTSNLSPELLTGLFVRPDRMSAWQLYNYSKF-LSSNLQATDNIDLAFAKKIMYPFAI 312 Query: 283 VIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY--IPILY 340 +I +IS+ A + + + F + + + P + + Sbjct: 313 LIMMMISLPFAYLHFRSGSVSVKVFAGVMIGVGFHLVNNLFSHLSMVASFPPFVSAALPS 372 Query: 341 LFLFCISSIFLLMI 354 L F + L + Sbjct: 373 LLGFVVGMGALWWV 386 >gi|91782194|ref|YP_557400.1| membrane protein, YjgP/YjgQ like [Burkholderia xenovorans LB400] gi|91686148|gb|ABE29348.1| membrane protein, YjgP/YjgQ like protein [Burkholderia xenovorans LB400] Length = 382 Score = 89.7 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 41/375 (10%), Positives = 109/375 (29%), Gaps = 25/375 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRIYERYFARQIYLTFIFILFAFSGLFFFFDLINELNSVGHGNYKFQYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + I L + ++ + Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEYTIFRVSGLATNQSLRSLLKIGIPLVLLTYLIGEV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRL---------DDDLYIKISKYNPNNTLQ 171 + P +++ +A + S E ++ + ++ + + P+ T+ Sbjct: 121 VGPYTDQLSERVRLEALGSSVSSNFESGVWVKDTLTARADGEQVTRFVNVGELKPDATIS 180 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRK-----------SPISKDISI 220 + I + L + ++ Sbjct: 181 NVRIYEFDSKFRLSNVRTAKSGKYQPPGHWQLTGVTDTQLIDVPPPPGTPADALNPVYRA 240 Query: 221 MKFKSYTLQTE---SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLT 277 + + +++L + D+ F L + + + Y ++L Sbjct: 241 KEVAVPEYSLRSELTPQILSVLLVSPDRMSMFNLFRYIQHLTENHQDTQRYEIALWRKLL 300 Query: 278 QWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP 337 + ++S+ A R +F + + + H N + P Sbjct: 301 YPFAVFVMLVLSLPFAYL--HTRAGVVGMKVFGGIMLGMSFQLFNTLFSHIGTLNTWPAP 358 Query: 338 ILYLFLFCISSIFLL 352 + + + L Sbjct: 359 LTAATPGLVYLVLGL 373 >gi|78486087|ref|YP_392012.1| permease YjgP/YjgQ [Thiomicrospira crunogena XCL-2] gi|78364373|gb|ABB42338.1| YjgP/YjgQ family protein [Thiomicrospira crunogena XCL-2] Length = 370 Score = 89.7 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 58/372 (15%), Positives = 126/372 (33%), Gaps = 18/372 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E Y+ R + L+ + ++ I + + +I VS ++ + +P Sbjct: 2 MNLIERYLGRVLVSHTLLVLMVLLIILGFSEFMIQIGKVSDD-YTVAKGAMYTVLKLPVY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + T L S+ + EL I+ TG S + V+ A +L + + Sbjct: 61 GYEIFPVALLIGTLIGLGSLANHAELTILRVTGWSIRRIFFAVMKSAFILWVCAAVIGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P S K++ +A ++ + R + YI + + + + I D Sbjct: 121 VAPASESYAKKMRGEALHKNFSIGSTDDFWMRDG-ERYIHVGRVISDTQFYDVTIYSLED 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILND--------GEVHRKSPISKDISIMKFKSYT----- 227 Q + +A + +L ++ SP K ++FK Y Sbjct: 180 GQLSEQVHANTARYSEKEGQWVLYSLNRKVLDWQKMPALSPDRKTWKKLQFKQYDEVEGA 239 Query: 228 --LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIF 285 L T+ ++ ++ L + + E Y+ F ++L + Sbjct: 240 VDLPVSPTLLQTLHVETRYMGITDLFS-YISFLEENGLDAEAYKLAFWRKLAMPFVILGM 298 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC 345 + + + I + +SF + + + Q P + + Sbjct: 299 IALVFPLIFGSQRQVSIGQRIFVGIMIGMSFHLLNQIFGNLSVVYQLPAIMGAFLPSIVL 358 Query: 346 ISSIFLLMIKKK 357 +S+ FLLM + + Sbjct: 359 MSAAFLLMRRLR 370 >gi|183600430|ref|ZP_02961923.1| hypothetical protein PROSTU_04001 [Providencia stuartii ATCC 25827] gi|188020226|gb|EDU58266.1| hypothetical protein PROSTU_04001 [Providencia stuartii ATCC 25827] Length = 365 Score = 89.7 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 57/357 (15%), Positives = 134/357 (37%), Gaps = 19/357 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + + + + +++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFVLMLIFFSQKSIDILGAAVQGNIPSDLVLPLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + + +E+ ++ G + L+K L LA L ++ + + Sbjct: 62 LILPLSLFLGLLMTYSKLYTESEITVMHACGLGKSVLVKAALVLATLTALVAIGNIAWML 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +Q+ A A+ + + E F D + N + +F+ R T Sbjct: 122 PWSSQYQEQVLADAKANPGLAAMVEGQFKTTKDRNIVLYIGDVKGNDFKNVFLAQLRATN 181 Query: 183 --THKIYYAQSGSIDLD---RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + D RQ ++L++G + + + +D I FK+Y + S Sbjct: 182 EQRPSVVVADSGYMREDADGRQIVVLDEGTRYEGTALLRDFRITDFKNYQAVIDHKPSDA 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + +N+ L N + N +EFH RLT V+ L+ Sbjct: 242 RNDRVEQKNMLQLWKANDFDSN----------AEFHWRLTIVFSVVVMALM---VVPLSE 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI-PILYLFLFCISSIFLLM 353 + ++ ++ + ++ + F S + + E+ ++ ++ +++ Sbjct: 289 VNPRQGRVLSMLPAMLLYLIFFLLQSTLRNSAEKGDVDPKYAMWAVNLGYLALAIIL 345 >gi|291279033|ref|YP_003495868.1| hypothetical protein DEFDS_0631 [Deferribacter desulfuricans SSM1] gi|290753735|dbj|BAI80112.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1] Length = 344 Score = 89.7 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 55/353 (15%), Positives = 124/353 (35%), Gaps = 13/353 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ E Y+L+ + FL+ LF +FI + +I+ L+ + + ++ IP+ Sbjct: 1 MRITEKYVLKELVPVFLVGNLFFIFILLIDKIVDLSELILAKNVPFFFVAELIIAYIPSF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + V ++ ++EL+ + + G + + KP + L + + + Sbjct: 61 LVITIPTSTLLSALIVYGRLSDDSELVAMKSLGADKYNIFKPSILLGFISLVLALLMSLY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + PK + + ++ + +EN + + K N G+ I++ +D Sbjct: 121 LMPKGNDFAIERLMQISKYVSINDFKENELYTEIPGFVLYTDKRVDKNKFLGLIIINKKD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + + L++G + + S ++FKS+ + + Sbjct: 181 HIVIQAKKGEIVNTTEGSLVFNLDNGVL--IDTKGEIPSKLEFKSFVVNVPIITEKKFDV 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + N + E KR +I + V + Sbjct: 239 RNERLMS-------IRNLINHLNKSNIIKFELSKRFALPFASIIMAIFGAVV---GSFFH 288 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKI-EQNPYYIPILYLFLFCISSIFLL 352 + K + +S+ I + I NPY + +F I ++LL Sbjct: 289 RGGKAFGLSVSIIIVLIYNTLLLLSQNLINMLNPYLAAWVANIIFIILLVYLL 341 >gi|300690719|ref|YP_003751714.1| permease, predicted YjgP/YjgQ family [Ralstonia solanacearum PSI07] gi|299077779|emb|CBJ50417.1| putative permease, predicted YjgP/YjgQ family [Ralstonia solanacearum PSI07] Length = 372 Score = 89.7 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 47/361 (13%), Positives = 117/361 (32%), Gaps = 19/361 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + L ++ +++ + + ++ S N +L + G L Sbjct: 2 IFEQALRRELSFTAGAVFLVLLTFMLTTLVIRILGMAANGEASPNDVLLLIGLATLGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT +++E+++ G S I+PVL ++ + + + Sbjct: 62 ILLCATLFISVLLVLTRWYKDSEMVVWFTAGISLTDFIRPVLRFSLPFVVLVALLALFGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + + S + F Y+ + + + Q Sbjct: 122 PWANQQSALFRDRFEQRDVLSMISAGRFIEPAHGNYVLFIEGVDAGMKHARNLFVANAAQ 181 Query: 183 THKIY----YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT-ESANSST 237 + + + ++L+ G + +P D I++F Y ++ + Sbjct: 182 DKIGVALAKTGEFKTSPNGDRYVLLDKGRRYEGTPGQLDYRIVEFDRYGVKVASKPPQAD 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 L + + LL E R+ L + F LI+I A Sbjct: 242 ANLPTKSRPTTELL----------ANPTPENMGELVWRIGLPLLALNFVLIAIPLAY--- 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + + P+ ++ I + + Q +L + +++ M+ + Sbjct: 289 VNPRLGRYTPMIFAVLIYLTYSNLLNLSQAWVAQ-GKMNAMLAWWPIHLAAFVCAMLLFR 347 Query: 358 Y 358 + Sbjct: 348 F 348 >gi|254521723|ref|ZP_05133778.1| permease YjgP/YjgQ family protein [Stenotrophomonas sp. SKA14] gi|219719314|gb|EED37839.1| permease YjgP/YjgQ family protein [Stenotrophomonas sp. SKA14] Length = 360 Score = 89.7 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 48/356 (13%), Positives = 124/356 (34%), Gaps = 14/356 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L +SFL + + ++ ++ ++ + ++ +L G Sbjct: 1 MLKLDRYLLGDFVQSFLATLIVLLVVSVGGVLVDILGNIADGRLPAKLLFSQLGLQFIAY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP++ P + + + R++E+ +I G L++P+L L + + + + Sbjct: 61 LPLILPLALMLGLLLAIARLYRDSEMAVITAIGVGPKRLLRPLLMLVVPVVLLVGACSLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P +Q+ +A ++ + LE F L + + +S +P+ T G + + Sbjct: 121 LGPWAGRVAEQMIIEANRSVLMAGLEPGRFTPLPNGGVVYLSSISPDGTELGKVFMQRQK 180 Query: 181 TQTHKIYYAQSGSIDLDRQAII---LNDGEVHRK-SPISKDISIMKFKSYTLQTESANSS 236 ++ A G + + L+DG + D + F + + Sbjct: 181 DDRIEVVSAAGGRMFFEGARQRFLELDDGHQVEGPAAGGLDYRLATFARNDVALPDGAQT 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 L+ + +++ H+RL L + F L+++ Sbjct: 241 RTEDDPELMPTLQLI----------GDGRPQAQAQLHRRLAPPLIALAFALLTVPLGRSS 290 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 ++ ++ ++ + + + S I + SI++ Sbjct: 291 PRQQRYGRMMLALMAYMVGTNLMFIGSGWIATGKIPAALGLWWLTLPLLALSIWMY 346 >gi|257454351|ref|ZP_05619614.1| permease YjgP/YjgQ family protein [Enhydrobacter aerosaccus SK60] gi|257448254|gb|EEV23234.1| permease YjgP/YjgQ family protein [Enhydrobacter aerosaccus SK60] Length = 357 Score = 89.7 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 40/358 (11%), Positives = 105/358 (29%), Gaps = 6/358 (1%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + + + + + V L + + + + L+ Y P L Sbjct: 2 ILSRYVKKQALFAMTGAIIGLWLLKVVFDYLAELQDL-NDHYNYLDALRFIAYSAPRDLL 60 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 PF + L + +EL +I G SR ++ V+ AI+ I + + Sbjct: 61 DYMPFGTLLGAVVGLGLLANTSELTVIQAAGISRFKIVGWVMQPAIIFVIIRLLLGQYVV 120 Query: 123 PKCR---STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 P +K A+ + ++ D K N + Sbjct: 121 PTSNQLAHQVKHDKPLLSSAINGYWDKQANRIINIDHANTKGELKNIKVWQLDDNAHIQQ 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 Q + + D + ++ + ++ + + L E + + Sbjct: 181 VLQADTGSFVSQNTADKTSGWQLQQIKQLTIAADGHSQLTTIPTMTLQLPIEPSAIYLLT 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 ++ +++ L + + F K+L + L++ Sbjct: 241 RSPDNMSVTEL-WQHQQLLAKDKRRSLEHEVAFWKKLLAPFAMLSLVLVACSFVFGSLRN 299 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + I + + F + + ++ L + +++ + +I+ K Sbjct: 300 QSLGYRIVIALLFGLVFSYLQDLVGFVSLSTGFSPFF-MVLLPIIASAALGVYLIRNK 356 >gi|152981611|ref|YP_001354150.1| hypothetical protein mma_2460 [Janthinobacterium sp. Marseille] gi|151281688|gb|ABR90098.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 376 Score = 89.7 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 44/362 (12%), Positives = 120/362 (33%), Gaps = 21/362 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ + R + + + I + +++ + + + + ++ + G+ LP Sbjct: 2 IFQRALRRDLLSTAGAVFTTLFTITITVTLIRILGQAAGGKIASSDVVALLGFSALNYLP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + V+T +++E+++ +G S I+PVL + + + + Sbjct: 62 ILLNLTGFVAVLLVVTRSYQDSEMVVWFASGLSLAKWIQPVLMFGLPIVTLTAVLSLFLT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + + + F + + ++ + I S Sbjct: 122 PWSNEQSAVYKERYANREDIARVSPGKFQESSSSDRVFFVEGVSGDSTKVKNIFVSSVLN 181 Query: 183 THKIYYAQSG----SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + ++++ G + P D +M+F Y + + + + + Sbjct: 182 GKTSVVVAKEGTVEIDQAGDKFLVMHQGRRYDGIPTQSDFELMEFDRYGVLVATQSKALV 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + + L N NN N E R++ L ++ L++I + Sbjct: 242 GDTSARATSTKELLSNRNNFNDG---------EILWRVSLPLMGILLMLLAIPLGF---V 289 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-----PYYIPILYLFLFCISSIFLLM 353 + + + I+L + S+ + QN + P+ + L ++ F Sbjct: 290 NPRGGRSANLLIALFLFVFYSNMLSFAQATVVQNRSTLMLAWWPVHLVALIVVAVFFTWR 349 Query: 354 IK 355 +K Sbjct: 350 LK 351 >gi|167470530|ref|ZP_02335234.1| putative permease [Yersinia pestis FV-1] Length = 337 Score = 89.3 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 51/345 (14%), Positives = 119/345 (34%), Gaps = 19/345 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFSQKLVRILGAAVDGEIPTNVVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ +++ G + +LI L LA+ S I+ + Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMNACGMGKKSLIMAALILALFTSGLAAINTIWLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + A+ + + L F +D +F+ R Sbjct: 122 PWSSKHQDVVLNDAKANPSLAALGGGQFKSSNDGNSALFIGNVAGKEFNRVFLAQLRPNG 181 Query: 183 THK-----IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + Q +ILN G + + + +D I F Y Sbjct: 182 NQRPSVVVADSGHMSELPDGSQMVILNKGTRYEGTALLRDFRITDFVDYQAVIGHKQVQQ 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 A+ ++ L + R+EFH RLT + VI L+ Sbjct: 242 SSNGADQMSMKELWRSQEPDA----------RAEFHWRLTLIVSVVIMALL---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 + ++ ++ + ++ + F S + K + P+++++ Sbjct: 289 VNPRQGRVLSMLPAMLLYLIFFLLQSSLRSKAGK-GQLDPLVWMW 332 >gi|170692023|ref|ZP_02883187.1| permease YjgP/YjgQ family protein [Burkholderia graminis C4D1M] gi|170143307|gb|EDT11471.1| permease YjgP/YjgQ family protein [Burkholderia graminis C4D1M] Length = 382 Score = 89.3 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 38/375 (10%), Positives = 109/375 (29%), Gaps = 25/375 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R + +F+ + + ++ +N V + P+ Sbjct: 1 MRIYERYFARQVYLTFIFILFAFSGLFFFFDLINELNSVGHGNYKFQYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + I L ++ + Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEYTIFRVSGLATNQALRSLLKIGIPLVFLTYLIGEV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRL---------DDDLYIKISKYNPNNTLQ 171 + P +++ +A + S + ++ + ++ + + P+ T+ Sbjct: 121 VGPYTDQLSERVRLEALGSSVSSNFQSGVWVKDTLTARADGEQVTRFVNVGELKPDATIS 180 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRK-----------SPISKDISI 220 + I + + L + ++ Sbjct: 181 NVRIYEFDSKFRLSNVRIAKSGVYQPPGHWQLTGVTDTQLIDVPPPSGTPADALNPVYRA 240 Query: 221 MKFKSYTLQTE---SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLT 277 + + +++L + D+ F L + + + Y +++ Sbjct: 241 RQVALPEYSLRSELTPQILSVLLVSPDRMSMFNLFRYIQHLTENHQDTQRYEIALWRKVL 300 Query: 278 QWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP 337 + ++S+ A R +F + + + H N + P Sbjct: 301 YPFAVFVMLVLSLPFAYL--HTRAGVVGMKVFGGIMLGMSFQLFNTLFSHIGTLNTWPAP 358 Query: 338 ILYLFLFCISSIFLL 352 + + + L Sbjct: 359 LTAATPGLVYLVLGL 373 >gi|149907704|ref|ZP_01896451.1| hypothetical protein PE36_07442 [Moritella sp. PE36] gi|149809374|gb|EDM69303.1| hypothetical protein PE36_07442 [Moritella sp. PE36] Length = 361 Score = 89.3 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 49/354 (13%), Positives = 125/354 (35%), Gaps = 20/354 (5%) Query: 13 GRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAME 72 +S + + I Q + ++ V + N+++++ Y +P + ++ P + Sbjct: 1 MKSQVAVLFILSLIFVSQQFVALLSKVMTGALPANLVMEMLLYTMPALGTLILPVSLFIG 60 Query: 73 TTNVLTSMNRNTELLIIDNTGTSR-ITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQ 131 + +E++I+ G + L+ +L ++ + + F + ++ Sbjct: 61 ILFAHGRLYAESEMVILTACGYTPSRILMSSLLLSSVTIGLVAFNAFIYAPTAEEGRVQL 120 Query: 132 LSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV--DSRDTQTHKIYYA 189 L + + + + Y+ + +L+ IFI S++ + I A Sbjct: 121 LENVDADVGLATLKQGRFESLDGGLAVVYVESYDSDKSLRKIFIAKSPSQEGERPSIVLA 180 Query: 190 QSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 G+++ D Q + L+ G + +D I+ F Y + + + S K Sbjct: 181 DKGNVESDDNGSQWLKLSQGLRYEGELSQRDFRIVDFSEYRVFIQEQDVSERGRKTKALP 240 Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 S L N N ++ E R+ Q V L++++ + ++ + Sbjct: 241 TSELWNSNEF----------EHKVELQWRIAQ---VVAIPLLTLLVVPLAMVNPRQGRYA 287 Query: 307 PIFISLSISFGVFWGFSYIIHKIE-QNPYYIPILYLFLFCISSIFLLMIKKKYT 359 +F +L + F S I + + ++ + + + Y+ Sbjct: 288 KLFPALLMFLTYFMLLSAARSAILDEKLPLVFGFWIVHLGVLILAIWFNLANYS 341 >gi|292486865|ref|YP_003529735.1| inner membrane protein YjgP [Erwinia amylovora CFBP1430] gi|292900738|ref|YP_003540107.1| permease [Erwinia amylovora ATCC 49946] gi|291200586|emb|CBJ47717.1| putative permease [Erwinia amylovora ATCC 49946] gi|291552282|emb|CBA19319.1| Inner membrane protein yjgP [Erwinia amylovora CFBP1430] Length = 366 Score = 89.3 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 49/345 (14%), Positives = 125/345 (36%), Gaps = 19/345 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGEIPTNLVLTLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G + L+K + L + ++ ++ + Sbjct: 62 LILPLSLFLAILMTLGRLYTESEITVMHACGLGKSVLVKAAMILMLFTALLAALNVGWLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+ + L F + D + + NT + +F+ R Sbjct: 122 PWSARYQNEVMQNAKANPGAAALAAGQFQQSADGQSVLFIENVKGNTFRNVFLAQLRPKG 181 Query: 183 T--HKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G ++ Q + L+ G + + +D I FK+Y + Sbjct: 182 NARPSVVVAEQGRMEQRVDGSQIVTLDSGTRFEGTALLRDFRITDFKNYQAIIGHQAVTL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + +L L + + + +RSE H RLT +I L+ Sbjct: 242 DPNDSEQMSLDTLWHSDKPD----------FRSELHWRLTLVFSVLIMALM---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 + ++ ++ + ++ + F S + + P + ++ Sbjct: 289 VNPRQGRVLSMLPAMLLYLVFFLLQSSLRSSGGK-GRIDPAVAMW 332 >gi|296125162|ref|YP_003632414.1| permease YjgP/YjgQ family protein [Brachyspira murdochii DSM 12563] gi|296016978|gb|ADG70215.1| permease YjgP/YjgQ family protein [Brachyspira murdochii DSM 12563] Length = 356 Score = 89.3 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 48/357 (13%), Positives = 108/357 (30%), Gaps = 4/357 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+L+ F S L V + + + R++ + E +N + P Sbjct: 1 MKKLNAYLLKEFLSFFFGSLLLFVVLVTIADLSSRLSFYTEHPELINYFITYHLARAPHN 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P +T VL + +N E+L I+N+G S P+ + I+L + L Sbjct: 61 TYYIFPVALMFASTYVLGTFVKNKEMLAIENSGISLFKFSMPMFVIVIMLCLILVFFWQF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + + S F ++ LY + + + ++ D Sbjct: 121 VAAPLNKVSFAANDAMRGNKQASKSGPWQLFGGNNYLYFIDTYFYQEQYMTNTILLKMND 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 K + + + +K+I + + +Y L Sbjct: 181 DGGIKFRISSPYIQWNNDDKKWYVKNGILTTFSENKEIEVKEINNYPLDVLERPEHFYGR 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 D ++ H R++ I L++ + + Sbjct: 241 PLLDSMSLTEEAHIIKLQKEVNMNTSRLETDLHYRISYCFSGFIIVLLASLFSKFSTQS- 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + + I +++ I + + P + ++ I L ++ K Sbjct: 300 ---VLVVSLVMVIIVALLYYSILMIFRSMGEAGNMNPFIAAWMPNIIFAILCILAFK 353 >gi|297171530|gb|ADI22528.1| predicted permeases [uncultured Oceanospirillales bacterium HF0500_09M11] gi|297182284|gb|ADI18453.1| predicted permeases [uncultured Oceanospirillales bacterium HF4000_13G19] Length = 353 Score = 89.3 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 47/357 (13%), Positives = 97/357 (27%), Gaps = 4/357 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y R + L IV + + + + + L+ +P Sbjct: 1 MTLLKRYFWRSVLLPSLAIVAIIVGLDCLFSFIYELE-FLRGGYQVMQALQFVLTTVPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 P + T L M + EL +I G S + + VL I L + Sbjct: 60 FHEYLPMAILLGTLIGLGLMANSGELSVIRAAGVSTLQVSWMVLRPVIFLMLLSIPVGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + E + R D+ + + D Sbjct: 120 LAPYTEQVAQSNRSLQEGGGEALRSEYGFWHREGDEFIHINTVQPNGVLYGLTRYRFNDD 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 Q + + + D L + + R + + S +VL Sbjct: 180 HQLEESQFVERALYQGD--HWTLQNIQGTRFGDDRTETYTEGGGRWDTSLTPQLLSIVVL 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + ++ L N + Y F ++L + LI+I Sbjct: 238 EPRRLAMAKLWN-YTRYMKEQGLQSADYMLAFWQKLLMPAATIGMVLIAISFIFGPLREV 296 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I ++F F + + + + L C+ L+++ + Sbjct: 297 TMGLRMAAGIVAGLTFNYGQQFFGHLSLVFRTEPLLAAGLPPLLCLVLGIWLLLRVR 353 >gi|15806095|ref|NP_294799.1| hypothetical protein DR_1075 [Deinococcus radiodurans R1] gi|6458807|gb|AAF10648.1|AE001958_2 conserved hypothetical protein [Deinococcus radiodurans R1] Length = 394 Score = 89.3 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 46/385 (11%), Positives = 109/385 (28%), Gaps = 36/385 (9%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 Y+ R + L L I I+ S ++++ + GY +P L Sbjct: 15 TRLTRYVTRELLPPLLAGTLLFTAILSFGYFF--ISSQWLSGVPVSLIARWIGYQLPDTL 72 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 V P + T MN EL+ + G + +P + +L++ + Sbjct: 73 VKVLPMAVVLMTVVAFGRMNTERELVAVQAGGIGLGRVTRPAAVVGLLVTALSVWLSLWV 132 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + L A S L +QG+ + Sbjct: 133 APRANVETRGLYWDALTGAGLSQLVGKTVDLGQGLTLAMQGYDAGARQMQGVRVEKWDKD 192 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDI--SIMKFKSYTLQTESANSSTIV 239 + + + + + L +V+R + + + +V Sbjct: 193 NFRQGMVVFADAGKFEGNQLSLTGYQVYRVDYAAAAALSGVADNDPAAFREAVQKVFPLV 252 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETY---------------------------RSEF 272 D+N + L+ + + + R Sbjct: 253 QVPEDRNAALNLDTGLSRKQTLAQYADAIGADAEGWPELITKLTAPGVPQSERDAARVNL 312 Query: 273 HKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN 332 +++L ++ L ++ A + + ++L I+ + FS + Sbjct: 313 NRKLALPFANLVLVLAALPFALRFGRT----LGVSLGVALVIAVAYYLLFSVGLTLAGLL 368 Query: 333 PYYIPI-LYLFLFCISSIFLLMIKK 356 P + ++L + L ++++ Sbjct: 369 PGLPELGVWLANIVFALGGLWLLRR 393 >gi|222148152|ref|YP_002549109.1| hypothetical protein Avi_1542 [Agrobacterium vitis S4] gi|221735140|gb|ACM36103.1| conserved hypothetical protein [Agrobacterium vitis S4] Length = 362 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 50/356 (14%), Positives = 114/356 (32%), Gaps = 12/356 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTES-LNILLKISGYLIPT 59 + + Y L+ + + + I ++I + S + +S L + ++ +P Sbjct: 3 LNTLSRYFLKRYAITVFWFVIGVAAIIFLIDFSEVSGRFSDNEQSSLFGVFLLTLMRLPL 62 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 +L PF L ++NR +EL+I G S + P L A +L + N Sbjct: 63 LLQQTVPFIALFSGMVTLITLNRRSELVIARAAGISVWQFMFPFLLGAFMLGCATSLLIN 122 Query: 120 IIEPKCRST----IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI 175 + + + S + + + + +D I + + TL + Sbjct: 123 PLAALGQKQAATLEAEYSDPGKASNNKNSVPWMRQITGKEDTIIGATSVLEDGTLLMQAV 182 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 D Q + + L +L D + + + + Sbjct: 183 FIHFDGQGRITSRQDARTAKLQDGYWLLKDVVE---TKPGETPKRETSAQVSTNLKQEFV 239 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + + + L +Y + ++FH L+ V LI+ + K Sbjct: 240 QERLAQPDTVAFYELSQKIAVAKSY-GVSTKNLETQFHTLLSTPFLFVAMTLIAATVSLK 298 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + Q + + + IS V + + ++ + P + ++ I + L Sbjct: 299 FSRFNQSR---SVILGGIISGFVLYVATVLVKAFGSSGVVPPFVATWVPVIVATAL 351 >gi|163854870|ref|YP_001629168.1| hypothetical protein Bpet0565 [Bordetella petrii DSM 12804] gi|163258598|emb|CAP40897.1| conserved hypothetical protein [Bordetella petrii] Length = 392 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 46/371 (12%), Positives = 115/371 (30%), Gaps = 25/371 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M++ Y+ R I RS + L ++ + ++ ++ V S+ LL + +PT Sbjct: 1 MRTARRYLAREIYRSCAVVLLALLGLFTFFALVDDLDNVGDK-FSMLALLYMQALALPTR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L + + EL+I+ +G S + L++ + + + L I + Sbjct: 60 LYDLLPIGLLIGAILALAGLAQRNELVILRVSGVSGMRLLRMLWLITLPLMIGASLLSEF 119 Query: 121 IEPKCRSTIKQLSAKAQ-----LALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI 175 + P + S + + Y + + N Sbjct: 120 VTPAAEIKSGEASLMFRGKASGTRMDSGYWFKEPTRDGGTRIINIAKLLADGNVEGVTLY 179 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSP--------------ISKDISIM 221 Q + A +G+ D+ +L + ++ + Sbjct: 180 EFKPGLQLTTMSTAATGAFTRDKL--VLKNVVETHIDDRAAQALADAKPPRTPPASVTKL 237 Query: 222 KFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLF 281 + VL +L+ LL+ + ++ ++++ Sbjct: 238 PQRELDTTLSPERLLARVLTPERMSLNTLLD-YIDYLHHNQLDAGRQVVALWRKVSYPFT 296 Query: 282 PVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL 341 ++ I+ R+ +FI + + G F ++ + + + L Sbjct: 297 LLVMITIAAPIGFM--QTRRGGVGAKVFIGILLGVGFFMLNQLALNVGMLSRWPPWLTAL 354 Query: 342 FLFCISSIFLL 352 +++ L Sbjct: 355 GPNVGATLLAL 365 >gi|163792837|ref|ZP_02186813.1| Predicted permease [alpha proteobacterium BAL199] gi|159181483|gb|EDP65995.1| Predicted permease [alpha proteobacterium BAL199] Length = 365 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 41/355 (11%), Positives = 100/355 (28%), Gaps = 16/355 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + YI R L + I+ I +++ +++ + S +L++++ +P + Sbjct: 6 TLSTYIGRQFVFWVLGTFAAIMAIVFLLDLIELLRRGSGKDGAHFGVLVEMAALKLPNMG 65 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF + T + R EL++ G S + P + +A+LL N I Sbjct: 66 QQILPFAVLFGSMLAFTRLTRTNELVVARAAGISVWQFLMPAIAVALLLGALKVGVVNPI 125 Query: 122 EPKCRSTIKQLSAKAQLALTFSYL-------EENLFFRLDDDLYIKISKYNPNNTLQGIF 174 + L S++ + ++ + L + Sbjct: 126 SSVMTARFNVLEDTILRNRVDSFMTVGQGGLWIRERTESGQHVVHALAARQNDAELANVL 185 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 ++ + + + + + N Sbjct: 186 VIRFGHNDEFLERIDARTARLGAGYWEL----HDTVVTSVKGRPDQRGSIRIPTRLTIQN 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + L +R +H L L + LI+ + Sbjct: 242 IQDSFASPETMSFWEL-PGFIRILENAGFSAVKHRLYWHALLASPLLLIAMVLIAATFSL 300 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 L R+ + L F +++ S I+ + + +L + ++ Sbjct: 301 --RLTRRGGTLLWASSGLFTGFLLYFM-SDIVFALGLSARIPEVLAAWTPATVTM 352 >gi|126640321|ref|YP_001083305.1| hypothetical protein A1S_0228 [Acinetobacter baumannii ATCC 17978] gi|332874943|ref|ZP_08442794.1| permease, YjgP/YjgQ family [Acinetobacter baumannii 6014059] gi|332736886|gb|EGJ67862.1| permease, YjgP/YjgQ family [Acinetobacter baumannii 6014059] Length = 341 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 48/330 (14%), Positives = 110/330 (33%), Gaps = 14/330 (4%) Query: 27 AWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTEL 86 ++++ + + +IL I GY +P L ++ P F + V + + E+ Sbjct: 1 MMGGRLIKYFGVAAQGRLDASILFSIIGYRLPEFLTLILPLGFFIGLMLVFGRLYVDHEM 60 Query: 87 LIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLE 146 +++ +G SR L + ++ + ++ + + + P ++L+ + F + Sbjct: 61 AVLNGSGVSRHQLARLLIPMTLVYMVCQSVLMLWMTPWGLREFEKLTTTQAVRTGFDLVR 120 Query: 147 ENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDR------QA 200 F S L+ IF + + Sbjct: 121 PREFISSGPYTIYAGSLSEDRKNLKDIFFYQRAAKEGKPDVMILAKEATRVEVANDTANV 180 Query: 201 IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNY 260 + L G + P + +F+SY L+ E+ + + L N+P Sbjct: 181 VDLVQGRRYEIFPGQPKYTQAEFQSYRLRLENDKDVKFESGDVEALSTSKLFSKANDPV- 239 Query: 261 RPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFW 320 RSE RL +I ++S+ ++ + ++ P + + Sbjct: 240 -------VRSELGWRLFGPFTIIIALMLSVALSEVSPRQGRYYRLIPSIFIFASLIVLMI 292 Query: 321 GFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 I K E + + P+ L +++F Sbjct: 293 AIKTRISKGELDIWAYPVALLVYAIAAALF 322 >gi|218460846|ref|ZP_03500937.1| putative permease protein [Rhizobium etli Kim 5] Length = 362 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 44/353 (12%), Positives = 114/353 (32%), Gaps = 10/353 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + Y R + + IA+++ + +S ++ + ++ +P +L Sbjct: 5 TLSRYFFRRYLATTAWFLIGASAIAFLLDFSETAGRMSGLPGYTIGGGIVMTAVRLPLIL 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PF VL +NR EL++ G S + P + ++ L + + N + Sbjct: 65 QQTIPFVALFVGMTVLIGLNRKYELVVTRAAGISVWQFMFPFVAGSLALGVLTTTALNPL 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 + + + + + + + G +VD+ Sbjct: 125 AAWGQRQALLVESDWRGENAVLRKAPQIPWLRQISGRDDVIIGAQTVQENGTKLVDAVLI 184 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + + D L DG + + + + ++Q + V + Sbjct: 185 HFDS---SGRVIMRQDAATAKLEDGYWQLNGVVERKPGEIPLRKASVQLRTNLKQDFVQE 241 Query: 242 ---ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 A + F L+ + ++F+ L+Q L V LI+ + K + Sbjct: 242 RLTAPETIGFFDLSNRIAAAKSFGISTKALETQFNSLLSQPLLLVAMTLIAATVSLKFSR 301 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 Q + + + +S + + + ++ + P + ++ + ++ L Sbjct: 302 FNQSR---SVILGGILSGFMLYVITVLVKAFGSSGVVPPFVATWIPVVVALAL 351 >gi|144900091|emb|CAM76955.1| permease YjgP/YjgQ family [Magnetospirillum gryphiswaldense MSR-1] Length = 367 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 44/354 (12%), Positives = 106/354 (29%), Gaps = 8/354 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSST-ESLNILLKISGYLIPTVL 61 + YI R +F I+ + ++ I++ I + + L+ ++ +P ++ Sbjct: 6 TLSAYIGRQFLLAFASVLAVILGVVFLFDIIELIRRAAGRGDLGVFNLVAMALLKLPQMM 65 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 V PF + + R EL++ + G S + PVL L L + + N + Sbjct: 66 HTVLPFAVMIGAMVAFWRLTRTHELVVARSAGISAWQFLTPVLVLVAGLGVIELTAFNPM 125 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 +++ + L T + + L + + + + Q + ++ R Sbjct: 126 AATMYGRFQKMEDEILLGKTSALDVSEMGLWLREGDAQRQIVLHADQVQQELLTLNLRGV 185 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKS----PISKDISIMKFKSYTLQTESANSST 237 + + + L + L DG + K + Sbjct: 186 HVFVLNAEEHFTRRLSAASGRLADGVLELTDVWEMEGGKSSVHHPALKLATELTLERVHD 245 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L +R F L+ L L++ V + + Sbjct: 246 NFASPETMSFWQL-PAFITFFEKAGFAATKHRMHFQSLLSSPLLYCAMVLVAAVFSLRP- 303 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + + + + F+ II+ + L + + + + Sbjct: 304 -NMRAGGLLMRVGGGVAAGFGIYFFNKIIYAFGLSATLPQGLAAWSPALVAGLI 356 >gi|323525103|ref|YP_004227256.1| permease YjgP/YjgQ family protein [Burkholderia sp. CCGE1001] gi|323382105|gb|ADX54196.1| permease YjgP/YjgQ family protein [Burkholderia sp. CCGE1001] Length = 382 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 40/375 (10%), Positives = 109/375 (29%), Gaps = 25/375 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R + +F+ + + ++ +N V + P+ Sbjct: 1 MRIYERYFARQVYLTFIFILFAFSGLFFFFDLINELNSVGHGNYKFQYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + I L ++ + Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEYTIFRVSGLATNQALRSLLKIGIPLVFLTYLIGEV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRL---------DDDLYIKISKYNPNNTLQ 171 I P +++ +A + S + ++ + ++ + + P+ T+ Sbjct: 121 IGPYTDQLSERVRLEALGSSVSSNFQSGVWVKDTLTARADGEQVTRFVNVGELRPDATIS 180 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRK-----------SPISKDISI 220 + I + + L + ++ Sbjct: 181 NVRIYEFDSKFRLSNVRIAKSGVYQPPGHWQLTGVTDTQLIDVPPPSGTPADALNPVYRA 240 Query: 221 MKFKSYTLQTE---SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLT 277 + + +++L + D+ F L + + + Y ++L Sbjct: 241 KQVVLPEYSLRSELTPQILSVLLVSPDRMSMFNLFRYIQHLTENHQDTQRYEIALWRKLL 300 Query: 278 QWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP 337 + ++S+ A R +F + + + H N + P Sbjct: 301 YPFAVFVMLVLSLPFAYL--HTRAGVVGMKVFGGIMLGMSFQLFNTLFSHIGTLNTWPAP 358 Query: 338 ILYLFLFCISSIFLL 352 + + + L Sbjct: 359 LTAATPGLVYLVLGL 373 >gi|298369121|ref|ZP_06980439.1| permease, YjgP/YjgQ family [Neisseria sp. oral taxon 014 str. F0314] gi|298283124|gb|EFI24611.1| permease, YjgP/YjgQ family [Neisseria sp. oral taxon 014 str. F0314] Length = 371 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 40/365 (10%), Positives = 140/365 (38%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ ++ + + + + ++ + Q + + + +++ + + G+ + + P Sbjct: 2 IYQRNFIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAVDAVAALVGFWVIGMTP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ ++ + + + + Sbjct: 62 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFALLIAVMQLWVM 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFF---RLDDDLYIKISKYNPNNTLQGIFIVDSR 179 P ++ + + S +E F + D +Y + + ++ +F+ + Sbjct: 122 PWAELRSREYAEILKQKQELSLVEAGEFNSLGKRSDRVYFVETFDTESGIMKNLFLRELD 181 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANSS 236 I +A+ G ++ +++ + L +G + P D + + F+ ++ + Sbjct: 182 KNGNDNIIFAKEGNFALTDNKRTLELRNGYRYSGKPGRADYNQVSFEHLSMIISTTPKIV 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + L Y++E RL+ + ++ ++++ Sbjct: 242 DPIAHRRTIPTAKLF----------GSDNPQYQAELMWRLSLPISVLLLSMLAVPL---S 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMI 354 + + I I++ + G +++ + + ++ +L + + I +L+ Sbjct: 289 YFNPRTGHTYNILIAIGMFLIYQNGLTFLRDAVEDGKIHFWFGMLPMHILMIVIAVVLLR 348 Query: 355 KKKYT 359 + Sbjct: 349 VRSMP 353 >gi|310766279|gb|ADP11229.1| Putative permease [Erwinia sp. Ejp617] Length = 366 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 50/341 (14%), Positives = 119/341 (34%), Gaps = 15/341 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGEIPTNLVLTLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G + L+K + L + ++ ++ + Sbjct: 62 LILPLSLFLAILMTLGRLYTESEITVMHACGLGKSVLVKAAMILMLFTALLAAVNVGWLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+ + L F + D + + +T +F+ R Sbjct: 122 PWSSRYQNEVMQNAKANPGAAALAAGQFQQSGDGQSVLFIENVKGSTFSNVFLAQLRPKG 181 Query: 183 T--HKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + AQ G ++ Q + L+ G + + +D I FK+Y + Sbjct: 182 NARPSVVVAQQGHMEQRVDGSQIVTLDSGTRFEGTALLRDFRITDFKNYQAIIGHQAVTL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + +L L + + + +RSE H RLT +I L+ + + Sbjct: 242 DPNDSEQMSLDTLWHSDKPD----------FRSELHWRLTLVFSVLIMALMVVPLSVVNP 291 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 + + P + + F + K +P Sbjct: 292 RQGRVLSMLPAMLLYLVFFLLQSSLRSSGSKGRIDPAIAMW 332 >gi|53718605|ref|YP_107591.1| putative permease [Burkholderia pseudomallei K96243] gi|167814687|ref|ZP_02446367.1| putative permease protein [Burkholderia pseudomallei 91] gi|167909936|ref|ZP_02497027.1| putative permease protein [Burkholderia pseudomallei 112] gi|52209019|emb|CAH34959.1| putative permease protein [Burkholderia pseudomallei K96243] Length = 383 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 44/381 (11%), Positives = 113/381 (29%), Gaps = 28/381 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRLYERYFARQIYVTFIFVLFAFSGLFFFFDLISELNSVGHGNYKFGYAVLRVALQAPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ ++ + + + I ++ Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLVKIGVPIVIATYLIGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF---------FRLDDDLYIKISKYNPNNTLQ 171 I P +++ +A + + ++ ++ + +P++T+ Sbjct: 121 IGPYSDQLSERVRLEALGSSVSTNFASGVWVKDTLTARDNGEPVTRFVNVGTLSPDSTIS 180 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT---- 227 + I + + +L D + + ++ + + + Sbjct: 181 DVRIYEFDSKFNLQNVRIAKRGHYQPPGHWLLTDVTDTQLTSLAGNGTASPVDTLNPVYR 240 Query: 228 ------------LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKR 275 S +++ +L L + + + Y ++ Sbjct: 241 AQQVTLPQYSLRSDLTPQILSVLLVSPERMSLFNLFR-YIQHLKENQQDTQRYDIALWRK 299 Query: 276 LTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY 335 L + ++S+ A I L +SF +F I + N + Sbjct: 300 LLYPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLFNTLFSHIGTL--NTWP 357 Query: 336 IPILYLFLFCISSIFLLMIKK 356 P+ CI L K Sbjct: 358 APLTAALPGCIYLALGLFALK 378 >gi|84622418|ref|YP_449790.1| hypothetical protein XOO_0761 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188578607|ref|YP_001915536.1| putative permease, YjgP/YjgQ family [Xanthomonas oryzae pv. oryzae PXO99A] gi|58425052|gb|AAW74089.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|84366358|dbj|BAE67516.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188523059|gb|ACD61004.1| putative permease, YjgP/YjgQ family [Xanthomonas oryzae pv. oryzae PXO99A] Length = 360 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 126/357 (35%), Gaps = 15/357 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L +SFL + + ++ ++ ++ + ++ +LL G Sbjct: 1 MPKLDRYLLSDFTQSFLATLIVLLVVSVGGVLVDILGNIADGRIPARLLLSQVGLQFVAY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP++ P + L + R++E+ +I G +++P+L L + + + + + Sbjct: 61 LPIILPLALMLGLLLALARLYRDSEMAVITAIGVGPTRMLRPLLMLVVPVVVVIGLCSLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P T + + A ++ + LE F L D + + + + G + + Sbjct: 121 LGPWASRTAEAMLEDANRSVLMAGLESGQFTPLSDGGVVYMQTISADGKGLGKIFLQRQQ 180 Query: 181 TQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISK--DISIMKFKSYTLQTESANS 235 + A G++ + + L+DG D +MKF S + Sbjct: 181 NDRIDVVTADRGALFFEGKTDRYLHLDDGYRTEGPAGGATLDYRLMKFASSDIALPDRTR 240 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + LL+ + R++ H+RL L + F ++++ + Sbjct: 241 LHDANDPEVMWTTQLLS----------DERPAARAQLHERLAPPLLALAFAMLTLPLSRS 290 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 ++ +I F++ + + + I + +++ Sbjct: 291 APRQQRYGRIMLAFLAYMVGTNLMIVGTQWIANGKAPAALGLWWLTLPLLAVAVWAY 347 >gi|148261610|ref|YP_001235737.1| permease YjgP/YjgQ family protein [Acidiphilium cryptum JF-5] gi|326405100|ref|YP_004285182.1| permease YjgP/YjgQ family protein [Acidiphilium multivorum AIU301] gi|146403291|gb|ABQ31818.1| permease YjgP/YjgQ family protein [Acidiphilium cryptum JF-5] gi|325051962|dbj|BAJ82300.1| permease YjgP/YjgQ family protein [Acidiphilium multivorum AIU301] Length = 376 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 39/345 (11%), Positives = 87/345 (25%), Gaps = 12/345 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTE-SLNILLKISGYLIPTVL 61 + LYI R + + + I + L + + + + +L + +P + Sbjct: 12 TLSLYIGRRFLGAVVAMQAGLTAIGALFDFLDLLRQSADKPQATFWRMLALEVLRVPWLG 71 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF + + R++EL++ TGTS + + A L+ + + + I Sbjct: 72 MQILPFAVLLGGIFAFWRLTRSSELVVARATGTSVWQFLAVPVAGAALIGVLATTAGSPI 131 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 + + L + + + L + + T Sbjct: 132 SAIMFARAEVLYSTYLGVDSGPLSLQGGQLWLRQADDAGGKGGIAILHADAVHLHGKVLT 191 Query: 182 QTHKIYYAQSGSIDLDRQAI----ILNDGEVH----RKSPISKDISIMKFKSYTLQTESA 233 H + L + L G R + + Sbjct: 192 TGHITVLRLTAQTTLQERIEAARGQLEPGGWRLESARILTPDGEPRAVSALRIPTTLTVG 251 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + + L + F L L L++ A Sbjct: 252 RVQESFASPSALSFWAL-PGFIRLLRRSGFSATQHELAFQSLLALPLLCATMVLVA--AG 308 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 R+ I I + F +F + + + Sbjct: 309 FSMRPSRRGGAIQMIGAGVGCGFLLFMLSEVAAQLGKSGALPVGL 353 >gi|225619709|ref|YP_002720966.1| permease YjgP/YjgQ [Brachyspira hyodysenteriae WA1] gi|225214528|gb|ACN83262.1| permease YjgP/YjgQ [Brachyspira hyodysenteriae WA1] Length = 417 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 59/418 (14%), Positives = 127/418 (30%), Gaps = 61/418 (14%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YI+ FL LF FI + + + I L+ ++ L + L++ Y++P Sbjct: 1 MKKINKYIILETIGPFLAGILFFTFIFVIQLLPELIRLIVNNGAPLFMSLEVFVYMLPFN 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P M + ++ + E++++ G + + P++ L + IF N+ Sbjct: 61 IAITIPMSILMASIIGYGRLSSDNEIIVMRALGFPHMRIYMPIIILGVFTFIFSLFFNNV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I + + L + + + F + D SKY + ++ + I D Sbjct: 121 IMSESNYRYRALISYMVNIKPSIAVGKLEFSDIPDMGLSIGSKYADDTSMSNVVIYDRS- 179 Query: 181 TQTHKIYYAQSGSIDLDRQAI-----ILNDGEVHRKSPISKDIS-IMKFKSYTLQT--ES 232 T ++ A+ G + L DG V + F S + Sbjct: 180 -DTKRVITAKYGLWKNNEANAQVVTLTLYDGVVQEMPGYGFISNDYTVFDSMDINIVRNV 238 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLET------------------------- 267 + S+ + ++ + + Sbjct: 239 STLSSHERGLREMPAWKIMEKINQTKIDADKSVNEQINGMIVNAYNNIDTNAVSITSFSN 298 Query: 268 -------------------------YRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 Y EFHK ++ + LI + Sbjct: 299 EYIQTNSAELTSLREKAMEEAVPYFYYVEFHKFISIPAACLFMVLIGAPLGIVGKRSGKG 358 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 I + I + + I + +P I + + + + LMI+ +++ Sbjct: 359 FGFGLSVIVVVIYYLLITAAELIAGGKKVSP-LIAMWFPNIVLAAMGSFLMIRSFFSR 415 >gi|167645642|ref|YP_001683305.1| permease YjgP/YjgQ family protein [Caulobacter sp. K31] gi|167348072|gb|ABZ70807.1| permease YjgP/YjgQ family protein [Caulobacter sp. K31] Length = 354 Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 52/356 (14%), Positives = 108/356 (30%), Gaps = 11/356 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK +LY+LR +G L + L + I ++ +L+ + +L + P + Sbjct: 1 MKI-QLYVLRTVGTRVLGAGLILFSILQILDLLEVTTDIIDRGLGTAGVLYYAALRSPRL 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + + R ++ + TG S ++ L + L+ F I Sbjct: 60 VEQVAPLATLAGGLFAFSQLARENAIIAMRATGISAYRIVGMALPVVFLVMALDFSCAQI 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P+ + +A + FR DDL I TL + I Sbjct: 120 IAPRTDP-VLADWWQATTPAAERKVPGPRSFRAGDDLVIAAGASADGGTLNAVKIYRRDK 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + L + R ++ S+ + + Sbjct: 179 IGRLIERIEAPSASYNSGGGWTLAKPVIVRFKGEQVNVVPAAQLSWPSPLHRQDVQALFA 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + + + Y + F ++ L+S A Sbjct: 239 DSPVPTAATARRALLS--GGGDRPAAFYETRFLSAFAGPFAALVMLLLSAPVALANFRSG 296 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF----LFCISSIFLL 352 Q + ++ + F V G ++ + + PIL ++ +F +++ L Sbjct: 297 QGAGLLAGGLAAGLLFLVVNG---MLSALGEGGSLSPILAVWGGPVIFAALAVYAL 349 >gi|148556806|ref|YP_001264388.1| permease YjgP/YjgQ family protein [Sphingomonas wittichii RW1] gi|148501996|gb|ABQ70250.1| permease YjgP/YjgQ family protein [Sphingomonas wittichii RW1] Length = 400 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 52/359 (14%), Positives = 126/359 (35%), Gaps = 11/359 (3%) Query: 5 ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 + Y+ R I L + + + + ++L+ + V S ++++ ++ LIP + + Sbjct: 8 DRYVARLIATPLLATLVIAAMLLTLDKMLRLFDFVVSEGGPVSVVWRMLANLIPEYMSLG 67 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P + + ++EL + G S L++ + A+ L++ I+P Sbjct: 68 IPIGLMLGCLLAFRKLALSSELDVFRAVGMSYGRLLRVPYYYAVALALLNLAIVGFIQPY 127 Query: 125 CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS-KYNPNNTLQGIFIVDSRDTQT 183 R + L + + + ++ F +L + I++ L GIF++ Sbjct: 128 SRYAYEGLRFELRSGALGASIKVGEFTKLGKRMTIRVESSREGGRELSGIFVMTESKDGK 187 Query: 184 HKIYYAQSGSI----DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS--- 236 A+ G D D + L G + +P K+ +++F + L + Sbjct: 188 SLAVTAEHGQFLATDDPDTIILRLQKGVLVHDAPQFKEPRVLQFVGHDLPIDLPKMEAFR 247 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + + L+ + + +RSEFH RL + + ++++ A Sbjct: 248 QRGGRDLEMTMPELV-VTAHQATTPAKQRAQFRSEFHFRLVEVATMFLLPMLALALAVPP 306 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 R + + I + L++ +++ M + Sbjct: 307 K--RSSSALGVFLSIVMIVTQHKINEYAASVAALGRIDPLIALWVPFLAFAALVWWMYR 363 >gi|332286756|ref|YP_004418667.1| hypothetical protein PT7_3503 [Pusillimonas sp. T7-7] gi|330430709|gb|AEC22043.1| hypothetical protein PT7_3503 [Pusillimonas sp. T7-7] Length = 392 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 42/356 (11%), Positives = 114/356 (32%), Gaps = 23/356 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M++ Y+ + I RS ++ + ++ + +++ ++ +S+ +L L + +PT Sbjct: 1 MRTARRYLAKEIYRSTIVVLMALIGLFTFFALIEELDNLSNQ-FTLLNLFYMQALALPTT 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L + + EL+I+ +G S + L+ + + I L F+ I Sbjct: 60 LYDLLPIGLLIGAILALAGLAQRNELVILRVSGVSGMKLLTMLWIVTIPLVFGAFLLSEI 119 Query: 121 IEPKCRSTIKQLSAKAQLA----LTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 I P + S S I I + + + I + Sbjct: 120 ITPAAEIKSSEASLTLLGKAGGGRLNSGYWFKESDEQGGTRIINIGQLKSSGNVADITLY 179 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPIS--------------KDISIMK 222 + + ++ + ++L D + + S + + Sbjct: 180 EFK-NGQELATFSTAKQGQFADGTLVLGDVKQTSINADSLSTLANAVQPDTPLTRLETLP 238 Query: 223 FKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFP 282 ++ +L ++ LL+ + + +++ Sbjct: 239 ERTLKTSLTPERLIARILTPERMSIRVLLD-YIDYLENNNLQTDRQIVALWRKMAYPFTL 297 Query: 283 VIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 ++ I+ + R+ +F+ + + G F ++ N + + Sbjct: 298 LVMITIAAPISFM--QTRRGGVGSKVFVGILLGVGFFMLNQLALNVGMLNQWAPWV 351 >gi|307946742|ref|ZP_07662077.1| permease [Roseibium sp. TrichSKD4] gi|307770406|gb|EFO29632.1| permease [Roseibium sp. TrichSKD4] Length = 364 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 42/356 (11%), Positives = 108/356 (30%), Gaps = 13/356 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTV 60 ++ +Y +S L L + ++ +L+ + ++ + IS +P + Sbjct: 5 RTLAIYFSARFFKSILGLFLLAAVLIFLFDVLELVRRGGDQEGFTVVRVALISILRVPLL 64 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V PF + +++R EL++ +G S P + + +++ ++ N Sbjct: 65 LEQVIPFAVLFGSILAFVTLSRALELVVARASGISVWQFAAPAVVVGLIIGTLSVVAYNP 124 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-----LYIKISKYNPNNTLQGIFI 175 + + + +A + L+ + D + + T Sbjct: 125 LAVWLQHRSDEAAAGLFGSEQSFLLQTTQDVWVRQDGLDGESVLLAKQLLDGGTRLLDVT 184 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + + D + ++ + L Q L D V+ + + +Y + Sbjct: 185 IFAFDKEGSFKERVEAATARLGDQIWFLEDVTVYTTERDPQQYGRYEVSTY---LTATEV 241 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + + L Y ++ L + L +I+ + Sbjct: 242 RESIGSPESISFWSLPR-FIELARNAGLPAYRYTLQYQTLLARPLLLTAMIIIAAAVSL- 299 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + R I + F ++ S + PI+ + I + + Sbjct: 300 -RVSRFGGLGSMILGGIVAGFVLY-VLSELAKDFGGAGIVPPIVAAWAPGIFGVLM 353 >gi|146328919|ref|YP_001210037.1| hypothetical protein DNO_1153 [Dichelobacter nodosus VCS1703A] gi|146232389|gb|ABQ13367.1| conserved hypothetical membrane protein [Dichelobacter nodosus VCS1703A] Length = 349 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 44/356 (12%), Positives = 110/356 (30%), Gaps = 10/356 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 ++ +I R I ++ +F++ I +++Q + + + ++L I +P + Sbjct: 3 TLYDRHIARIITAHIIIVLIFLLGIDFLVQSAEESDNIGRGNYHFWLMLSILLLNVPARI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + T L +N+ EL +I +G SR+ L L +A L L + Sbjct: 63 VEFMPAAVLVGTITALGQLNKQQELTVIRTSGISRLRLSLSGLMIAFFLGCALIVLAEYG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 ++ + L A D+ +YI I R Sbjct: 123 VAPAQNRAQWLHHHALNTTAPQTDHGIWLRDGDNIVYIGA----FQADGSLEKIRFYRPH 178 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + + + + ++ + S S I+ + + A + ++ Sbjct: 179 EHDLEIQESQRATFMQTHWQLDDNRALCIGSQSSMPITPTT--HWQNRILPATIAQLMQL 236 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 N L L + + +R+ + + ++++ R+ Sbjct: 237 KNAYTLRELY-TITGFLRAHQLNDQQMSLKLWQRIFLPITTITMVILALPCVFN---TRR 292 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + I + + + + + + L I ++ L + + Sbjct: 293 DGNGARLVIGILLGASYYVVQGIVTKLGLLLHWSTALSALLPILIFALPPLFLLTR 348 >gi|332524894|ref|ZP_08401081.1| putative transmembrane protein [Rubrivivax benzoatilyticus JA2] gi|332108190|gb|EGJ09414.1| putative transmembrane protein [Rubrivivax benzoatilyticus JA2] Length = 358 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 46/348 (13%), Positives = 114/348 (32%), Gaps = 13/348 (3%) Query: 10 RCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCF 69 R + R+F + + I+ I + +++ I + + ++ + GY+ LP + Sbjct: 3 RELARTFGATLVVILTIVLTMFLIRTIGQAAGGVVAPQDVVLLLGYVALGHLPTMLALSL 62 Query: 70 AMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTI 129 + L M R++E++I G ++PVL + + + + + P Sbjct: 63 FVAVVVTLGRMYRDSEMVIWFAGGIGLSRFVRPVLRTSWPVLLVIAALLLFVWPWGNRNS 122 Query: 130 KQLSAKAQLALTFSYLEE-NLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYY 188 +L + + S + D I + + ++ +T + Sbjct: 123 LELRQRYEQRSDLSRVTPGVFQTSSDGSRVFFIERDTREGADARNVFIVAQTGETESVTS 182 Query: 189 AQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 A+SG ++ D + ++L G+ + + + + F++Y + + + + Sbjct: 183 ARSGRLERDGDDRFVVLERGQRNDVDLKTGEKAQSSFETYRVLADEKRAREAERQPPKAM 242 Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 + L +P PN E R L+ I A + Sbjct: 243 DTLDLLQDPTRPNQG---------ELTWRFGLLTGAGNMLLLGIGLAATNPRRASNWNLL 293 Query: 307 PIFISLSISFGVFWGFSYIIHKIEQN-PYYIPILYLFLFCISSIFLLM 353 + + F + + + +++ F I+ L Sbjct: 294 LALLGFVVYFNLINLSQAWVASGRLGMGAALAVVHGSAFAIALGLLWW 341 >gi|88810478|ref|ZP_01125735.1| permease YjgP/YjgQ [Nitrococcus mobilis Nb-231] gi|88792108|gb|EAR23218.1| permease YjgP/YjgQ [Nitrococcus mobilis Nb-231] Length = 357 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 37/319 (11%), Positives = 106/319 (33%), Gaps = 19/319 (5%) Query: 30 IQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLII 89 ++++ + +S N+L + G L V P F + + + R++E+ + Sbjct: 23 NRLIRFLADAASGDIPANLLFTLLGLKALANLGTVLPASFFLAIVMAMGRLYRDSEMAAL 82 Query: 90 DNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENL 149 G L + +L LA+ L++ + + P T +++ A+AQ + + Sbjct: 83 AACGVGPRELCRALLLLAVPLALLVGYLSLVFGPWAEGTAQRIVAEAQQSNRLQGVRPGR 142 Query: 150 FFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDR----QAIILND 205 F L + + + + A ++D + ++L + Sbjct: 143 FLDLGAGSAVAYVASIDAEGIMHGIFARAEQDGQPVLIAAARARREVDPETGARFLVLLN 202 Query: 206 GEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELL 265 G+ ++ P + +++F + L + + + L + Sbjct: 203 GQRYQGVPGQRAWRVIRFGQHGLSLGGSEPAQFSAARDGLTSWQLWH----------SED 252 Query: 266 ETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYI 325 ++ RL+ L ++ L ++ + + + ++ + F Sbjct: 253 RAAWAQLQWRLSMPLVTLVLTLFALPL---SKSAPRDGRYAKLLSAVLVYVLYFNLLKVA 309 Query: 326 IHKI--EQNPYYIPILYLF 342 + + P + + ++ Sbjct: 310 QGLLSQGRYPVGLGLWWVH 328 >gi|189500558|ref|YP_001960028.1| permease YjgP/YjgQ family protein [Chlorobium phaeobacteroides BS1] gi|189495999|gb|ACE04547.1| permease YjgP/YjgQ family protein [Chlorobium phaeobacteroides BS1] Length = 441 Score = 88.5 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 78/427 (18%), Positives = 140/427 (32%), Gaps = 73/427 (17%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YIL+ FL S + I+FI + + + + + ++ ++ + + Sbjct: 1 MKILYRYILKEHIGPFLFSFITILFILTLQFVTRFFDRFAGKDLGFIVIAELISLQVAWM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + T ++ ++E+ ++ G S L+ PVL A LL+ L NI Sbjct: 61 VVLALPMAVLVATLIAFGNLANSSEMTVMRAGGVSLYRLVFPVLVAAALLTGILERFNNI 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKY-NPNNTLQGIFIVDSR 179 + P+ K L A L EN F L D I + + + NTL+GI I + Sbjct: 121 VLPEANYQAKVLLRDITRAKPTFGLTENAFSGLVDGYSILVREEGSDPNTLEGITIYERG 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAII----LNDGEVHRKSPISK--------DISIMKFKSYT 227 + + A+SG I L +G++H+ K + F S Sbjct: 181 SNEDKAVITAESGHIAFTADYHYLILTLFNGQMHKMQGQGKEEYRVMTFEKHRFVFSSTG 240 Query: 228 LQTESANSSTIVLKANDQNLSFL----------------------------LNPNPNNPN 259 E + I + + L +N P Sbjct: 241 YGFERTEGNEIRRGDRELSAEQLFGMGMKFRKRMLDATVLIDKSIEREQKAINARSVQPE 300 Query: 260 YRPELLETY----RSEFHKRLTQWLFPV---------------------------IFGLI 288 R + Y ++E KR+ + L V F I Sbjct: 301 NRGAESDRYAGINKAEAEKRVDKMLVAVDREIEHIEQSQGMYNKYMVEFHKKYALSFACI 360 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILYLFLFCIS 347 V V ++ I LS+ F + +W + K+ P + ++L Sbjct: 361 VFVLVGAPLGVLAKRGGFGIGAGLSLLFFILYWALLIMGEKLSDRGLLDPGISMWLANAV 420 Query: 348 SIFLLMI 354 + + I Sbjct: 421 MLLIGFI 427 >gi|241203948|ref|YP_002975044.1| permease YjgP/YjgQ family protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857838|gb|ACS55505.1| permease YjgP/YjgQ family protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 362 Score = 88.5 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 41/354 (11%), Positives = 114/354 (32%), Gaps = 12/354 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + Y R + + + I++++ + +S ++ + ++ +P +L Sbjct: 5 TLSRYFFRRYLVTTGWFLIGVSAISFLLDFSETAGRMSGLPGYTIGGGVLMTAVRLPLIL 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PF VL +NR EL++ G S + P + +++L + + N + Sbjct: 65 QQTVPFIALFVGMTVLIGLNRKYELVVTRAAGISVWQFMFPFIAGSLVLGLLTMAALNPL 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLD----DDLYIKISKYNPNNTLQGIFIVD 177 + + + + + + DD+ I + T ++ Sbjct: 125 AAWGQRQALLVESDWRGENAVLRKAPQIPWLRQISGRDDVIIGAQTVQESGTKLIDAVLI 184 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 D+ I + + L+ LN+ + + + Sbjct: 185 HFDSSGQVILRQDAATAKLEDGYWQLNNVVERK---PGEIPVRKASVQLRTNLKQDFVQE 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L N ++ + ++F+ L+Q L V I+ + K + Sbjct: 242 RLTAPETIGFFDLSNRIAAAKSF-GISTKALETQFNSLLSQPLLLVAMTFIAATVSLKFS 300 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 Q + + + +S + + + ++ + P + ++ + ++ L Sbjct: 301 RFNQSR---SVILGGILSGFMLYVITVLVKAFGSSGVVPPFVATWIPVVVALAL 351 >gi|327188011|gb|EGE55241.1| putative permease protein [Rhizobium etli CNPAF512] Length = 362 Score = 88.5 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 42/353 (11%), Positives = 109/353 (30%), Gaps = 10/353 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + Y R + + IA+++ + +S ++ + ++ +P +L Sbjct: 5 TLSRYFFRRYLATTGWFLIGASAIAFLLDFSETAGRMSGLPGYTIGGGIVMTAVRLPLIL 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PF VL +NR EL++ G S + P + ++ L + + N + Sbjct: 65 QQTIPFVALFVGMTVLIGLNRKYELVVTRAAGISVWQFMFPFIAGSLALGVLTTTALNPL 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 + + + + + + D Sbjct: 125 AAWGQRQALLVESDWRGENAVLRKAPQIPWLRQ---ISGRDDVIIGAQTVQENGTKLIDA 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + + D L DG + + + + ++Q + V + Sbjct: 182 VLIHFDSSGRVILRQDAATAKLEDGYWQLNGVVERKPGEIPLRKASVQLRTNLKQDFVQE 241 Query: 242 ---ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 A + F L+ + ++F+ L+Q L V LI+ + K + Sbjct: 242 RLTAPETIGFFDLSNRIAAAKSFGISTKALETQFNSLLSQPLLLVAMTLIAATVSLKFSR 301 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 Q + + + +S + + + ++ + P + ++ + ++ L Sbjct: 302 FNQSR---SVILGGILSGFMLYVITVLVKAFGSSGVVPPFVATWIPVVVALAL 351 >gi|86357091|ref|YP_468983.1| putative permease protein [Rhizobium etli CFN 42] gi|86281193|gb|ABC90256.1| putative permease protein [Rhizobium etli CFN 42] Length = 362 Score = 88.5 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 42/353 (11%), Positives = 110/353 (31%), Gaps = 10/353 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + Y R + + IA+++ + +S ++ + ++ +P +L Sbjct: 5 TLSRYFFRRYLATTGWFLIGASAIAFLLDFSETAGRMSGLPGYTIGGGIVMTAVRLPLIL 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PF VL +NR EL++ G S + P + +++L + + N + Sbjct: 65 QQTIPFVALFVGMTVLIGLNRKYELVVTRAAGISVWQFMFPFIAGSLVLGVLTTTALNPL 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 + + + + + + D Sbjct: 125 AAWGQRQALLVESDWRGENAVLRKAPQIPWLRQ---ISGRDDVIIGAQTVQENGTKLIDA 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + + D L DG + + + + ++Q + V + Sbjct: 182 VLIHFDSSGRVILRQDAATAKLEDGYWQLNGVVERKPGEIPLRKASVQLRTNLKQDFVQE 241 Query: 242 ---ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 A + F L+ + ++F+ L+Q L V LI+ + K + Sbjct: 242 RLTAPETIGFFDLSNRIAAAKSFGISTKALETQFNSLLSQPLLLVAMTLIAATVSLKFSR 301 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 Q + + + +S + + + ++ + P + ++ + ++ L Sbjct: 302 FNQSR---SVILGGILSGFMLYVITVLVKAFGSSGVVPPFVATWIPVVVALAL 351 >gi|292572537|gb|ADE30452.1| Putative permease [Rickettsia prowazekii Rp22] Length = 377 Score = 88.5 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 66/363 (18%), Positives = 156/363 (42%), Gaps = 11/363 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y ++ I ++ + I W+ QIL+ + L + + ++PT+ Sbjct: 18 MLLYRKYFIKNILPLLIIVTFSVTSIVWITQILKLLYLF-DKGIKVIDFFNLVVLVLPTL 76 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + + ++ +L+I+ +G + I L P L++A+ + + + + Sbjct: 77 LFILLPIITVIAVLYIYNNLKVERQLIILQTSGVNNIQLALPALYVALTIMLLAYYISST 136 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P +K + S +EE F ++ ++ + I K N + GI I D+R+ Sbjct: 137 ILPLSHINLKSRLNFIKNNYISSMIEEKTFNKITKNITVFIDKKLTGNIMNGIIIFDNRN 196 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI-SKDISIMKFKSYTLQTESANSSTIV 239 + +A SG++++ I + R+ + +++ + F S ++ ++ +S T Sbjct: 197 ADNPSVVFAGSGTLNIYGNNPIFELNKGLRQEYDANGNLTQLTFDSLMIKLQNNSSLTSQ 256 Query: 240 L-----KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 +AN+ +S LL P+ + + +E H+R+ L+ + +++ Sbjct: 257 RTQNNKEANEYYISELLTPSHDLVITKKI---KLIAEAHQRIIWPLYNFVLPCLALAVFL 313 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + ++ + +F +L++ F F + + +N +I Y L +I L ++ Sbjct: 314 RYPYSKKTTFMPVLFSALTVLFVTAIHF-ILQNFASKNLDFIFACYFNLLVALTIGLYLL 372 Query: 355 KKK 357 K Sbjct: 373 VHK 375 >gi|121595376|ref|YP_987272.1| permease [Acidovorax sp. JS42] gi|120607456|gb|ABM43196.1| permease YjgP/YjgQ family protein [Acidovorax sp. JS42] Length = 355 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 45/330 (13%), Positives = 108/330 (32%), Gaps = 5/330 (1%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y+ R +G L+ L I + V+++L V + ++ +P L M P Sbjct: 8 YLRRRVGTQILVLLLVITALMQVLELLDVTTDVLKRDQGFIGIVYYGLLRLPAELVMALP 67 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + T L +M RN E+ + G S + L+ +L LA +L++ F+ + + P Sbjct: 68 PAVLLGTLMALANMARNLEIATMRTAGLSMMRLLGYLLPLAAVLAVAQFVLSDHVLPPAE 127 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 + +K+ A + + + + +P+ + RD + Sbjct: 128 NGLKEWW----SASAPADDTPTKRWAHTSGGTVSMESTSPDGRRLIDVRLYVRDDRGLIQ 183 Query: 187 YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 + D Q + + +++ + + + + + Sbjct: 184 SRLTATEAQWDGQVWRFKGVNEFVYGDRRVERIQVAERAWDTNLRPEDVLRLDVARPNLS 243 Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 + +L + Y+S ++ L + L+++ A Sbjct: 244 TA-MLAEVIAGTRTGTQPHRYYQSVLYRSYAAPLAIFVMLLLALPTAVSLPRGTGGGSRM 302 Query: 307 PIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 + + L + F + G + + P + Sbjct: 303 AMALILGLGFLLCDGIVAALGLAARWPPLV 332 >gi|126441903|ref|YP_001058063.1| hypothetical protein BURPS668_1013 [Burkholderia pseudomallei 668] gi|126221396|gb|ABN84902.1| putative membrane protein [Burkholderia pseudomallei 668] Length = 383 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 44/381 (11%), Positives = 113/381 (29%), Gaps = 28/381 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRLYERYFARQIYVTFIFVLFAFSGLFFFFDLISELNSVGHGNYKFGYAVLRVALQAPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ ++ + + + I ++ Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLVKIGVPIVIATYLIGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF---------FRLDDDLYIKISKYNPNNTLQ 171 I P +++ +A + + ++ ++ + +P++T+ Sbjct: 121 IGPYSDQLSERVRLEALGSSVSTNFASGVWVKDTLTARDNGEPVTRFVNVGTLSPDSTIS 180 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT---- 227 + I + + +L D + + ++ + + + Sbjct: 181 DVRIYEFDSKFNLQNVRIAKRGHYQPPGHWLLTDVTDTQLTSLAGNGAASPVDTLNPVYR 240 Query: 228 ------------LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKR 275 S +++ +L L + + + Y ++ Sbjct: 241 AQQVTLPQYSLRSDLTPQILSVLLVSPERMSLFNLFR-YIQHLKENQQDTQRYDIALWRK 299 Query: 276 LTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY 335 L + ++S+ A I L +SF +F I + N + Sbjct: 300 LLYPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLFNTLFSHIGTL--NTWP 357 Query: 336 IPILYLFLFCISSIFLLMIKK 356 P+ CI L K Sbjct: 358 APLTAALPGCIYLALGLFALK 378 >gi|238028370|ref|YP_002912601.1| permease [Burkholderia glumae BGR1] gi|237877564|gb|ACR29897.1| Permease, putative [Burkholderia glumae BGR1] Length = 363 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 58/364 (15%), Positives = 125/364 (34%), Gaps = 16/364 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ I +++ + +S S +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTIMLTSMMIRIVGYAASGQVSPKDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M+ + VLT R++E+++ +G S LI+P+ + + + + + Sbjct: 62 MILVGTLFVSILFVLTRWYRDSEMVVWLASGVSLTRLIRPIGVFSTPIVLLIAFFAFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P K + A+ Q S L F + + + + + + Q Sbjct: 122 PWSNQQSKLIKARFQQRDEVSLLAPGQFRESTATHRVFFIEKMSPDQARVQNVFVTTTEQ 181 Query: 183 THKIY----YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + + I+L +G + P + IM+F+ Y ++ +S T Sbjct: 182 GKVNIVVSQTGRVETEKNGDRFIVLENGRRYDGVPGQPNFKIMQFERYGVKIQSKQVVTQ 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD-KRA 297 + L L +P N +EF R L + +++I A Sbjct: 242 PTTTSTSTLELLRDPTKENL-----------AEFAWRAGLPLIAINLMILAIPLAYQNPR 290 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 R + + I L+ S + S I + +L+L + I + + + Sbjct: 291 RGRTVNLVMAVLIYLTYSNLLNVVQSQIERGKLPFGVGLVVLHLVVAGIVAFLFWLRVRN 350 Query: 358 YTKI 361 I Sbjct: 351 RPLI 354 >gi|307728895|ref|YP_003906119.1| permease YjgP/YjgQ family protein [Burkholderia sp. CCGE1003] gi|307583430|gb|ADN56828.1| permease YjgP/YjgQ family protein [Burkholderia sp. CCGE1003] Length = 382 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 40/375 (10%), Positives = 109/375 (29%), Gaps = 25/375 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRIYERYFARQIYLTFIFILFAFSGLFFFFDLINELNSVGHGNYKFQYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + I L ++ + Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEYTIFRVSGLATNQALRSLLKIGIPLVFLTYLIGEV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRL---------DDDLYIKISKYNPNNTLQ 171 I P +++ +A + S + ++ + ++ + + P+ T+ Sbjct: 121 IGPYTDQLSERVRLEAMGSSVSSNFKSGVWVKDTLTARADGEQVTRFVNVGELKPDATIS 180 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRK-----------SPISKDISI 220 + I + + L + ++ Sbjct: 181 NVRIYEFDSKFRLSNVRIAQSGVYQPPGHWRLTGVTDTQLIDVPPPAGTPADALNPVYRA 240 Query: 221 MKFKSYTLQTE---SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLT 277 + + +++L + D+ F L + + + Y +++ Sbjct: 241 KQVVLPEYSLRSELTPQILSVLLVSPDRMSMFNLFRYIQHLTENHQDTQRYEIALWRKVL 300 Query: 278 QWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP 337 + ++S+ A R +F + + + H N + P Sbjct: 301 YPFAVFVMLVLSLPFAYL--HTRAGVVGMKVFGGIMLGMSFQLFNTLFSHIGTLNTWPAP 358 Query: 338 ILYLFLFCISSIFLL 352 + + + L Sbjct: 359 LTAATPGLVYLVLGL 373 >gi|116251334|ref|YP_767172.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841] gi|115255982|emb|CAK07063.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae 3841] Length = 362 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 40/353 (11%), Positives = 110/353 (31%), Gaps = 10/353 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + Y R + + + I++++ + +S ++ + ++ +P +L Sbjct: 5 TLSRYFFRRYLVTTGWFLIGVSAISFLLDFSETAGRMSGLPGYTIGGGVLMTAVRLPLIL 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PF VL +NR EL++ G S + P + ++ L + + N + Sbjct: 65 QQTVPFIALFVGMTVLIGLNRKYELVVTRAAGISVWQFMFPFIAGSLALGLLTMAALNPL 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 + + + + + + D Sbjct: 125 AAWGQRQALLVESDWRGENAVLRKAPQIPWLRQ---ISGRDDVIIGAQTVQENGTKLIDA 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + + D L DG + + + + + ++Q + V + Sbjct: 182 VLIHFDSSGQVILRQDAATAKLEDGYWQLNTVVERKPGEIPVRKASVQLRTNLKQDFVQE 241 Query: 242 ---ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 A + F L+ + ++F+ L+Q L V I+ + K + Sbjct: 242 RLTAPETIGFFDLSNRIAAAKSFGISTKALETQFNSLLSQPLLLVAMTFIAATVSLKFSR 301 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 Q + + + +S + + + ++ + P + ++ + ++ L Sbjct: 302 FNQSR---SVILGGILSGFMLYVITVLVKAFGSSGVVPPFVATWIPVVVALAL 351 >gi|299065988|emb|CBJ37169.1| putative permease, predicted YjgP/YjgQ family [Ralstonia solanacearum CMR15] Length = 372 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 48/364 (13%), Positives = 116/364 (31%), Gaps = 20/364 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + L ++ +++ + + ++ S N +L + G L Sbjct: 2 IFEQALRRELSFTAGAVFLVLLTFMLTTLVIRILGMAANGEASPNDVLLLIGLAALGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT +++E+++ G S I+PVL ++ + + + Sbjct: 62 ILLCATLFISVLLVLTRWYKDSEMVVWFTAGLSLTDFIRPVLRFSLPFVVLVGLLALFGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + + S + F Y+ + + + Q Sbjct: 122 PWANQQSALFRDRFEQRDVLSMISAGRFIEPAHGNYVLFIEGVDAGMKHARNLFVANAEQ 181 Query: 183 THKIY----YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT-ESANSST 237 + + + ++L+ G + +P D I++F Y ++ + Sbjct: 182 DKIGVALAKTGEFKAGPNGDRYVVLDKGRRYEGTPGQLDYRIVEFDRYGVKVANKPPQAD 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 L + + LL+ E R+ L + F LI+I A Sbjct: 242 ANLPTKSRPTTELLS----------NPTPENLGELVWRIGLPLLALNFVLIAIPLAY--- 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMIK 355 + + + P+ ++ I + + + + + L LL Sbjct: 289 VNPRLGRYTPMIFAVLIYLTYSNLLNLSQAWVAQGKMSAMLAWWPIHLAAFVCAALLFRF 348 Query: 356 KKYT 359 + Y+ Sbjct: 349 RHYS 352 >gi|254503227|ref|ZP_05115378.1| putative permease, YjgP/YjgQ family [Labrenzia alexandrii DFL-11] gi|222439298|gb|EEE45977.1| putative permease, YjgP/YjgQ family [Labrenzia alexandrii DFL-11] Length = 364 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 47/356 (13%), Positives = 114/356 (32%), Gaps = 13/356 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTV 60 ++ +Y ++ L LF + ++ +L+ + S ++ + IS +P + Sbjct: 5 RTLSVYFSGRFIKAILGLFLFAAVLLFLFDVLELVRRGSDREGFTVMRVAYISLLRVPLL 64 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V PF +++R EL++ G S P + + + L IF N Sbjct: 65 LEQVIPFTVLFGAIAAFVTLSRALELVVTRAAGISVWQFSTPAVLVGLFLGIFSITVYNP 124 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-----LYIKISKYNPNNTLQGIFI 175 + ++ +A A L+ + + D ++ S+ N T Sbjct: 125 AAVYLQQKSEEAAAGLFGADQTFLLQSSGEVWVRQDGLDGESVLRASQLLDNGTRLLRVT 184 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 V + D ++ L + L++ V+ + S+ + ++ + Sbjct: 185 VFTFDEDGTFRERIEAEQARLGNETWYLDNAIVYTTENDPQSYSVYQISTF---LTATEV 241 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + + L + Y ++ L + L + LI+ + Sbjct: 242 RESIGSPESISFWNLPR-FIDLARNAGLPAYRYNLQYQSLLARPLLLIAMILIAAAVSL- 299 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + R I + F ++ + + P++ + I + + Sbjct: 300 -KVSRFGGLGRMILGGILSGFVLY-VLTELAKDFGGAGIVPPLVAAWAPGIFGVLM 353 >gi|94500485|ref|ZP_01307016.1| predicted Permease [Oceanobacter sp. RED65] gi|94427275|gb|EAT12254.1| predicted Permease [Oceanobacter sp. RED65] Length = 340 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 37/328 (11%), Positives = 104/328 (31%), Gaps = 17/328 (5%) Query: 32 ILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDN 91 ++ +N + + Y P L ++ P F + V M+ E+ ++ Sbjct: 1 MVIHLNKAVAGIIPPEAVFYTILYNSPGFLQLILPLGFYISILLVYGRMHSENEMTVLYA 60 Query: 92 TGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFF 151 TG + + + ++ + + + P + + + Q FS++ F Sbjct: 61 TGFGPKQVFRITMAPVTVMMLLIGFLSLYLAPTAADKLDRYLQEQQQESEFSFVTPGRFN 120 Query: 152 RLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILN--DGEVH 209 L + + + + V D + + +D + + L +G+ Sbjct: 121 ALGKGGEKVSYAEDLSADRKQMQQVFMADGNVLLLAESGQQFVDPNSGSRYLELNNGKRF 180 Query: 210 RKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYR 269 P + M F Y ++ + + + LL+ Y+ Sbjct: 181 SGVPGDPNFEAMSFDRYAVKIAEESDVAKKARYEAVSTMELLD----------REHRVYK 230 Query: 270 SEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI 329 + H R+ ++ I +++ + ++ + + ++ + + + Sbjct: 231 ARLHYRIGLFILVPIIVIMAFPL---SHVKPRQGRYGKMLPAVVLYMVYYTTLITARKWM 287 Query: 330 --EQNPYYIPILYLFLFCISSIFLLMIK 355 P ++ + +L +S +LM Sbjct: 288 EQGDTPEWLGLWWLHGIFLSIGLMLMYW 315 >gi|320352233|ref|YP_004193572.1| permease YjgP/YjgQ family protein [Desulfobulbus propionicus DSM 2032] gi|320120735|gb|ADW16281.1| permease YjgP/YjgQ family protein [Desulfobulbus propionicus DSM 2032] Length = 360 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 46/358 (12%), Positives = 121/358 (33%), Gaps = 4/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YIL R+ M + + +I ++I+ +S +++ IP + Sbjct: 1 MILLYRYILAHFLRNLGMIMASFITLYLLIDFFEKIDNFLEKGKSFSLIATFFFANIPFI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVL-FLAILLSIFLFISEN 119 + +++P C + L +N + EL+ + G + P++ +FL + + Sbjct: 61 IDLMSPVCILLAGVVTLGVLNHSNELIALKACGIPLKKITVPIIGAALACTLLFLAMDQY 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 ++ T + + + + + ++ + + S+ +P L F Sbjct: 121 VLPKTIAVTNQIWNKEIKGKVPLGIYRNGRYYYRGQEGFYSFSRPDPQKNLFKNFSYTVW 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 D + + ++ L +G++ + + + F + + V Sbjct: 181 DKEHAANTLIAAEIAVWNKGVWTLRNGQIQK-AAGGDRFATQVFTNRRINFPETPDDFFV 239 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 LS + E ++F+ R++ L + L+ + Sbjct: 240 PAYRSMELSLVQLYKETQHTRSEEERSKAWADFYGRISYTLLGLPLLLLGLPLLLLVYRK 299 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN--PYYIPILYLFLFCISSIFLLMIK 355 R I +S ++F + ++ + + + P + + L F L+++ Sbjct: 300 WGRDLSLAIPVSCGMAFLCWGVYTTLQSLAKASYIPPLAAAISVHLLVGCVGFFLLLR 357 >gi|315185938|gb|EFU19702.1| permease YjgP/YjgQ family protein [Spirochaeta thermophila DSM 6578] Length = 361 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 42/361 (11%), Positives = 108/361 (29%), Gaps = 5/361 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + L F + + V I +I + + + + +L + +P Sbjct: 1 MRIITRFALSWFLPLFFAALVSFVTILELIDLFTNLVAYIDADLTTFQILHLQLLYLPKC 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P L S++ + EL+ + G S + P + +L S F E + Sbjct: 61 VTYSLPIATLFAVAFSLGSLHASNELIALFGAGISLYRFVLPFVVCGLLFSGAYFFIEEL 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + ++L A + + + ++ L + +Y+ + +V +D Sbjct: 121 LAIPSLTQKQELMAILMGRTSPTQVVNVTLVGEENRLVVHTRRYDDRSRTITRVLVYEKD 180 Query: 181 TQ--THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + A+ G+ D +++ +L + ++ F+ Sbjct: 181 EEGAFASRIEAERGTWDPEQREWVLQRVRRY-IRDEEGNLKEESFEKLRTDLGEIQPEDF 239 Query: 239 VLKANDQNLSFLLNP--NPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + + L ++++KR++ I L++ A + Sbjct: 240 LQTRHSIDKMTLAEAGRWIQTLKRAGLPYREALTDYYKRISFAFTSFIVALLASSVAGRF 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + + P L + +F SI Sbjct: 300 KANALLLSLLLSLSIGVSYYVFQMVTTLFAKLGYLPPVVGAWLPVLVFFSGSILFFKYIA 359 Query: 357 K 357 + Sbjct: 360 R 360 >gi|123966805|ref|YP_001011886.1| putative permease [Prochlorococcus marinus str. MIT 9515] gi|123201171|gb|ABM72779.1| possible permease [Prochlorococcus marinus str. MIT 9515] Length = 386 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 47/376 (12%), Positives = 120/376 (31%), Gaps = 25/376 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQ-ILQRINLVSSSTESLNILLKISGYLIPTVL 61 + +I+ + + ++ + + I + + I LKI +P L Sbjct: 10 LIDKWIISKLIPILFFAISAFTIVSLSVGVMFDLIRKIVEYGLPIFIALKIFFLSLPGFL 69 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + +++ N+E+L + + G + ++ P L LA+ ++ F + + Sbjct: 70 VIAFPMSVLLSCLLTYGNLSSNSEILALKSLGVNNFRVVLPSLLLAVFMTFLTFTFSDNL 129 Query: 122 EPKCRS-----------------TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKY 164 P + + ++ +I ++ Sbjct: 130 VPISNRLAADLLQNSMGKSMRTERGRYNISFSKYGSIVDSNTNKPIDGASHLTHIFYARR 189 Query: 165 NPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK 224 T+ I ++D T + AQ+G D + + N+G++ + +S + F Sbjct: 190 FLKKTMYDITVIDFSKKGTKILITAQNGVFDEELSSWQFNNGKIM-ATEDEGSVSTIIFD 248 Query: 225 SYTLQTESANSS--TIVLKANDQNLSFLLNPNPNNPNYRP-ELLETYRSEFHKRLTQWLF 281 +Y ++ S I L AN+ +S + + ++++T + Sbjct: 249 TYIYPLDNGPSKLAEIPLDANNMTISQARKAQKMYEMSGNTKESRKMKVRIYEKMTLPMS 308 Query: 282 PVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL-Y 340 ++F LI + K IS+ + F + + Sbjct: 309 CIVFALIGSTLGI--KQNIRSSKSQGFGISIILIFLYYLTCFVFSSMGVIGILTPFFAAW 366 Query: 341 LFLFCISSIFLLMIKK 356 + + ++ + Sbjct: 367 IPVLMFLGFGTFLLWR 382 >gi|326796829|ref|YP_004314649.1| permease YjgP/YjgQ family protein [Marinomonas mediterranea MMB-1] gi|326547593|gb|ADZ92813.1| permease YjgP/YjgQ family protein [Marinomonas mediterranea MMB-1] Length = 369 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 58/359 (16%), Positives = 121/359 (33%), Gaps = 19/359 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + S L ++ I + + + + S L I G+ +P+ + Sbjct: 2 RLFRYLAKEVLVSTAGVTLILLLIILSGRFVNYLGRAAEGKMSFEFLFIILGFHVPSFIQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M+ P F + + E+ I+ ++G S++ L L +A LL++ + Sbjct: 62 MILPLAFFLSLLLAYGRLYIENEMSILFSSGISKVKLTVYTLGIAGLLTLTSAFVNFWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + + F +++ F S + IF+ D Sbjct: 122 PYSEYQAELARQEQDQLTAFDFIQPGRFQGRGQQTTYVASFTPEEGWMNNIFLSDFVRKN 181 Query: 183 TH----KIYYAQSGSIDLDR----QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + + I L+ +I DG + +P + + IM+F +Y ++ E Sbjct: 182 GRDIPVQTIAKNAEQIRLETEGGLNYLIFKDGVRYEGTPGAANYRIMEFDTYAIRLEDKA 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 TI KA + L N Y +E H R+ + I +I + + Sbjct: 242 PGTI-DKAYAVPTTALFN----------SDNPKYIAELHWRIALVIMIPILAIIGVSLSQ 290 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + K+ P + + + G+ + K + + F I + L + Sbjct: 291 VNPRQGRFFKMLPAILLMIVYLGLLIWGKTALEKGKIPLHLGLWWAHGTFAIIAYLLFL 349 >gi|17547135|ref|NP_520537.1| hypothetical protein RSc2416 [Ralstonia solanacearum GMI1000] gi|17429437|emb|CAD16123.1| putative permease transmembrane protein [Ralstonia solanacearum GMI1000] Length = 372 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 48/364 (13%), Positives = 116/364 (31%), Gaps = 20/364 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + L ++ +++ + + ++ S N +L + G L Sbjct: 2 IFEQALRRELSFTAGAVFLVLLTFMLTTLVIRILGMAANGEASPNDVLLLIGLAALGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT +++E+++ G S I+PVL ++ + + + Sbjct: 62 ILLCATLFISVLLVLTRWYKDSEMVVWFTAGLSLTDFIRPVLRFSLPFVVLVGLLALFGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + + S + F Y+ + + + Q Sbjct: 122 PWANQQSALFRDRFEQRDVLSMISAGRFIEPAHGNYVLFIEGVDAGMKHARNLFVANAEQ 181 Query: 183 THKIY----YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT-ESANSST 237 + + + ++L+ G + +P D I++F Y ++ + Sbjct: 182 DKIGVALAKTGEFKAGPNGDRYVVLDKGRRYEGTPGQLDYRIVEFDRYGVKVANKPPQAD 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 L + + LL+ E R+ L + F LI+I A Sbjct: 242 ANLPTKSRPTTELLS----------NPTPENMGELVWRIGLPLLALNFVLIAIPLAY--- 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMIK 355 + + + P+ ++ I + + + + + L LL Sbjct: 289 VNPRLGRYTPMIFAVLIYLTYSNLLNLSQAWVAQGKMSAMLAWWPIHLAAFVCAGLLFRF 348 Query: 356 KKYT 359 + Y+ Sbjct: 349 RHYS 352 >gi|187479476|ref|YP_787501.1| permease [Bordetella avium 197N] gi|115424063|emb|CAJ50616.1| putative permease [Bordetella avium 197N] Length = 389 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 45/382 (11%), Positives = 127/382 (33%), Gaps = 25/382 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M++ Y+ R I RS + L ++ + ++ ++ V S+ LL + +PT Sbjct: 1 MRTARRYLAREIYRSCAVVLLALLGLFTFFALVDDLDNVGEK-FSMLALLYMQALALPTR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L + + EL+I+ +G S + L++ + + I + I + Sbjct: 60 LYDLLPIGLLIGAILALAGLAQRNELVILRVSGVSGMRLMRMLWVVTIPVMIGATLLSEF 119 Query: 121 IEPKCRSTIKQLSAKAQLA----LTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + P + + S R I I + ++ + + Sbjct: 120 VTPIAEIKSGEADLTFRGKAGGGRLNSGYWFKEPTRDGGTRIINIQTLLADGQVRDVTLY 179 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK--------------DISIMK 222 + + + + + D ++L+D R +P + ++ + Sbjct: 180 ELKPDLELESLSKAAKGVFTDGD-LLLSDVVQTRIAPEAAQALANAKQPPKPPAEVETLA 238 Query: 223 FKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFP 282 VL + + L++ + ++ + ++ Sbjct: 239 SLRLDTTLSPERLLARVLTPERMSAATLID-YIDYLHHNQLQADRQVVALWRKFVYPFTL 297 Query: 283 VIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--- 339 ++ I+ A + I I + ++F + S + + + P ++ L Sbjct: 298 LVMITIAAPIAFMQTRRGGVGAKVFIGILMGVAFFMVNQLSLNVGMLSRWPPWLTALGPN 357 Query: 340 -YLFLFCISSIFLLMIKKKYTK 360 + + ++ ++ + +++ Sbjct: 358 AAAMIVALGALVMMEYRHGFSR 379 >gi|332521048|ref|ZP_08397506.1| permease YjgP/YjgQ family protein [Lacinutrix algicola 5H-3-7-4] gi|332043141|gb|EGI79338.1| permease YjgP/YjgQ family protein [Lacinutrix algicola 5H-3-7-4] Length = 340 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 43/340 (12%), Positives = 99/340 (29%) Query: 18 MSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVL 77 M L + I + + ++I + L L ++ P + Sbjct: 1 MMILLFIPIGITVHLAEKIGKILDREAPLGETLIYFLDFTIYFAHLLFPLFLFLSVIWFT 60 Query: 78 TSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQ 137 + + NTE++ ++G S ++P L A ++++F + + P K Sbjct: 61 SKLANNTEVIAFLSSGVSFTRFLRPYLIGATIVAMFSILLGLYLAPVASKGFNDFQYKYL 120 Query: 138 LALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLD 197 L D ++ S T + + + A + + Sbjct: 121 KRKNNQAQSNVLKQINDKEIIYVSSFDPIKKTGLNFSLEHFENNKMTYKISAANIRYIEE 180 Query: 198 RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNN 257 L +++I + K E + A S L Sbjct: 181 DSIYRLRSYLKRNVGENEDELAIERKKDTIFSFELEDLVPEEYIAETLRYSELTRFIERE 240 Query: 258 PNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFG 317 + Y+ E +++ + + I +I++ + K+ + + Sbjct: 241 EKRGSSNIGRYKLELYRKWSLPVSVFILTIIAVAVSSKKRRGGMGVNLAFGICIAMVFVF 300 Query: 318 VFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 F + + + +P F+F I + LL K+ Sbjct: 301 FDKIFGTMAAQSDFSPLIAVWFPNFIFGILAAILLYNAKR 340 >gi|332851503|ref|ZP_08433500.1| permease, YjgP/YjgQ family [Acinetobacter baumannii 6013150] gi|332866797|ref|ZP_08437201.1| permease, YjgP/YjgQ family [Acinetobacter baumannii 6013113] gi|332729956|gb|EGJ61287.1| permease, YjgP/YjgQ family [Acinetobacter baumannii 6013150] gi|332734405|gb|EGJ65525.1| permease, YjgP/YjgQ family [Acinetobacter baumannii 6013113] Length = 341 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 47/330 (14%), Positives = 110/330 (33%), Gaps = 14/330 (4%) Query: 27 AWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTEL 86 ++++ + + +IL I GY +P L ++ P F + V + + E+ Sbjct: 1 MMGGRLIKYFGVAAQGRLDASILFSIIGYRLPEFLTLILPLGFFIGLMLVFGRLYVDHEM 60 Query: 87 LIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLE 146 +++ +G +R L + ++ + ++ + + + P ++L+ + F + Sbjct: 61 AVLNGSGVNRHQLARLLIPMTLVYMVCQSVLMLWMTPWGLREFEKLTTTQAVRTGFDLVR 120 Query: 147 ENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDR------QA 200 F S L+ IF + + Sbjct: 121 PREFISSGPYTIYAGSLSEDRKNLKDIFFYQRAAKEGKPDVMILAKEATRVEVANDTANV 180 Query: 201 IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNY 260 + L G + P + +F+SY L+ E+ + + L N+P Sbjct: 181 VDLVQGRRYEIFPGQPKYTQAEFQSYRLRLENDKDVKFESGDVEALSTSKLFSKANDPV- 239 Query: 261 RPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFW 320 RSE RL +I ++S+ ++ + ++ P + + Sbjct: 240 -------VRSELGWRLFGPFTIIIALMLSVALSEVSPRQGRYYRLIPSIFIFASLIVLMI 292 Query: 321 GFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 I K E + + P+ L +++F Sbjct: 293 AIKTRISKGELDIWAYPVALLVYAIAAALF 322 >gi|259907066|ref|YP_002647422.1| Putative permease [Erwinia pyrifoliae Ep1/96] gi|224962688|emb|CAX54143.1| Putative permease [Erwinia pyrifoliae Ep1/96] gi|283476866|emb|CAY72714.1| Inner membrane protein yjgP [Erwinia pyrifoliae DSM 12163] Length = 366 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 50/345 (14%), Positives = 123/345 (35%), Gaps = 19/345 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGEIPTNLVLTLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G + L+K + L + ++ ++ + Sbjct: 62 LILPLSLFLAILMTLGRLYTESEITVMHACGLGKSVLVKAAMILMLFTALLAAVNVGWLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+ + L F + D + + NT +F+ R Sbjct: 122 PWSSRYQNEVMQNAKANPGAAALAAGQFQQSGDGQSVLFIENVKGNTFSNVFLAQLRPKG 181 Query: 183 T--HKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + AQ G ++ Q + L+ G + + +D I FK+Y + Sbjct: 182 NARPSVVVAQQGHMEQRVDGSQIVTLDSGTRFEGTALLRDFRITDFKNYQAIIGHQAVTL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + +L L + + + +RSE H RLT +I L+ Sbjct: 242 DPNDSEQMSLDTLWHSDKPD----------FRSELHWRLTLVFSVLIMALM---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 + ++ ++ + ++ + F S + P + ++ Sbjct: 289 VNPRQGRVLSMLPAMLLYLVFFLLQSSMRSS-GSKGRIDPAIAMW 332 >gi|312170934|emb|CBX79193.1| Inner membrane protein yjgP [Erwinia amylovora ATCC BAA-2158] Length = 366 Score = 87.7 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 49/345 (14%), Positives = 124/345 (35%), Gaps = 19/345 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGEIPTNLVLTLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G + L+K + L + ++ ++ + Sbjct: 62 LILPLSLFLAILMTLGRLYTESEITVMHACGLGKSVLVKAAMILMLFTALLAALNVGWLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+ + L F + D + + NT + +F+ R Sbjct: 122 PWSARYQNEVMQNAKANPGAAALAAGQFQQSADGQSVLFIENVKGNTFRNVFLAQLRPKG 181 Query: 183 T--HKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G ++ Q + L+ G + + +D I FK+Y + Sbjct: 182 NARPSVVVAEQGRMEQRVDGSQIVTLDSGTRFEGTALLRDFRITDFKNYQAIIGHQAVTL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + +L L + + +RSE H RLT +I L+ Sbjct: 242 DPNDSEQMSLDTLWHSGKPD----------FRSELHWRLTLVFSVLIMALM---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 + ++ ++ + ++ + F S + + P + ++ Sbjct: 289 VNPRQGRVLSMLPAMLLYLVFFLLQSSLRSSGGK-GRIDPAVAMW 332 >gi|53725612|ref|YP_102445.1| hypothetical protein BMA0670 [Burkholderia mallei ATCC 23344] gi|67640814|ref|ZP_00439608.1| permease YjgP/YjgQ family protein [Burkholderia mallei GB8 horse 4] gi|76811145|ref|YP_332584.1| hypothetical protein BURPS1710b_1173 [Burkholderia pseudomallei 1710b] gi|121600496|ref|YP_993650.1| hypothetical protein BMASAVP1_A2341 [Burkholderia mallei SAVP1] gi|124384824|ref|YP_001028888.1| hypothetical protein BMA10229_A2944 [Burkholderia mallei NCTC 10229] gi|126449595|ref|YP_001081199.1| hypothetical protein BMA10247_1655 [Burkholderia mallei NCTC 10247] gi|126453481|ref|YP_001065300.1| hypothetical protein BURPS1106A_1020 [Burkholderia pseudomallei 1106a] gi|134281127|ref|ZP_01767836.1| putative membrane protein [Burkholderia pseudomallei 305] gi|167003638|ref|ZP_02269424.1| putative membrane protein [Burkholderia mallei PRL-20] gi|167718521|ref|ZP_02401757.1| hypothetical protein BpseD_05832 [Burkholderia pseudomallei DM98] gi|167737553|ref|ZP_02410327.1| hypothetical protein Bpse14_05780 [Burkholderia pseudomallei 14] gi|167823141|ref|ZP_02454612.1| hypothetical protein Bpseu9_05658 [Burkholderia pseudomallei 9] gi|167844705|ref|ZP_02470213.1| hypothetical protein BpseB_05393 [Burkholderia pseudomallei B7210] gi|167893240|ref|ZP_02480642.1| hypothetical protein Bpse7_05710 [Burkholderia pseudomallei 7894] gi|167901697|ref|ZP_02488902.1| hypothetical protein BpseN_05420 [Burkholderia pseudomallei NCTC 13177] gi|167917973|ref|ZP_02505064.1| hypothetical protein BpseBC_05418 [Burkholderia pseudomallei BCC215] gi|217419559|ref|ZP_03451065.1| putative membrane protein [Burkholderia pseudomallei 576] gi|226194459|ref|ZP_03790057.1| putative membrane protein [Burkholderia pseudomallei Pakistan 9] gi|237811280|ref|YP_002895731.1| permease YjgP/YjgQ family protein [Burkholderia pseudomallei MSHR346] gi|242314384|ref|ZP_04813400.1| putative membrane protein [Burkholderia pseudomallei 1106b] gi|254177658|ref|ZP_04884313.1| putative membrane protein [Burkholderia mallei ATCC 10399] gi|254181441|ref|ZP_04888038.1| putative membrane protein [Burkholderia pseudomallei 1655] gi|254190840|ref|ZP_04897347.1| putative membrane protein [Burkholderia pseudomallei Pasteur 52237] gi|254196385|ref|ZP_04902809.1| putative membrane protein [Burkholderia pseudomallei S13] gi|254199347|ref|ZP_04905713.1| putative membrane protein [Burkholderia mallei FMH] gi|254205663|ref|ZP_04912015.1| putative membrane protein [Burkholderia mallei JHU] gi|254259902|ref|ZP_04950956.1| putative membrane protein [Burkholderia pseudomallei 1710a] gi|254357821|ref|ZP_04974094.1| putative membrane protein [Burkholderia mallei 2002721280] gi|52429035|gb|AAU49628.1| membrane protein, putative [Burkholderia mallei ATCC 23344] gi|76580598|gb|ABA50073.1| membrane protein, putative [Burkholderia pseudomallei 1710b] gi|121229306|gb|ABM51824.1| putative membrane protein [Burkholderia mallei SAVP1] gi|124292844|gb|ABN02113.1| putative membrane protein [Burkholderia mallei NCTC 10229] gi|126227123|gb|ABN90663.1| putative membrane protein [Burkholderia pseudomallei 1106a] gi|126242465|gb|ABO05558.1| putative membrane protein [Burkholderia mallei NCTC 10247] gi|134247433|gb|EBA47518.1| putative membrane protein [Burkholderia pseudomallei 305] gi|147748943|gb|EDK56017.1| putative membrane protein [Burkholderia mallei FMH] gi|147753106|gb|EDK60171.1| putative membrane protein [Burkholderia mallei JHU] gi|148026948|gb|EDK84969.1| putative membrane protein [Burkholderia mallei 2002721280] gi|157938515|gb|EDO94185.1| putative membrane protein [Burkholderia pseudomallei Pasteur 52237] gi|160698697|gb|EDP88667.1| putative membrane protein [Burkholderia mallei ATCC 10399] gi|169653128|gb|EDS85821.1| putative membrane protein [Burkholderia pseudomallei S13] gi|184211979|gb|EDU09022.1| putative membrane protein [Burkholderia pseudomallei 1655] gi|217396863|gb|EEC36879.1| putative membrane protein [Burkholderia pseudomallei 576] gi|225933544|gb|EEH29533.1| putative membrane protein [Burkholderia pseudomallei Pakistan 9] gi|237504053|gb|ACQ96371.1| permease YjgP/YjgQ family protein [Burkholderia pseudomallei MSHR346] gi|238521609|gb|EEP85059.1| permease YjgP/YjgQ family protein [Burkholderia mallei GB8 horse 4] gi|242137623|gb|EES24025.1| putative membrane protein [Burkholderia pseudomallei 1106b] gi|243060864|gb|EES43050.1| putative membrane protein [Burkholderia mallei PRL-20] gi|254218591|gb|EET07975.1| putative membrane protein [Burkholderia pseudomallei 1710a] Length = 383 Score = 87.7 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 44/381 (11%), Positives = 113/381 (29%), Gaps = 28/381 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRLYEKYFARQIYVTFIFVLFAFSGLFFFFDLISELNSVGHGNYKFGYAVLRVALQAPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ ++ + + + I ++ Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLVKIGVPIVIATYLIGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF---------FRLDDDLYIKISKYNPNNTLQ 171 I P +++ +A + + ++ ++ + +P++T+ Sbjct: 121 IGPYSDQLSERVRLEALGSSVSTNFASGVWVKDTLTARDNGEPVTRFVNVGTLSPDSTIS 180 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT---- 227 + I + + +L D + + ++ + + + Sbjct: 181 DVRIYEFDSKFNLQNVRIAKRGHYQPPGHWLLTDVTDTQLTSLAGNGTASPVDTLNPVYR 240 Query: 228 ------------LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKR 275 S +++ +L L + + + Y ++ Sbjct: 241 AQQVTLPQYSLRSDLTPQILSVLLVSPERMSLFNLFR-YIQHLKENQQDTQRYDIALWRK 299 Query: 276 LTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY 335 L + ++S+ A I L +SF +F I + N + Sbjct: 300 LLYPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLFNTLFSHIGTL--NTWP 357 Query: 336 IPILYLFLFCISSIFLLMIKK 356 P+ CI L K Sbjct: 358 APLTAALPGCIYLALGLFALK 378 >gi|319789793|ref|YP_004151426.1| permease YjgP/YjgQ family protein [Thermovibrio ammonificans HB-1] gi|317114295|gb|ADU96785.1| permease YjgP/YjgQ family protein [Thermovibrio ammonificans HB-1] Length = 359 Score = 87.7 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 69/351 (19%), Positives = 114/351 (32%), Gaps = 18/351 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YI I R +S +F+ + + V S L + +P Sbjct: 1 MKVLHRYIAFEITRVAALSSALFLFVILMDRASTIAETVLGKGVSFLDFLSVLAKGLPAF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L +V P F + V MN N EL + G S L KPV L ++ S+ F S Sbjct: 61 LGIVIPMSFVLSVVIVFIGMNSNNELTAAKSCGISLKELSKPVFLLGLIFSLLSFYSLMF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + PK +K+ + + E F + + K P L F+ + Sbjct: 121 LAPKSNVAMKRELEELLRKKITLSITEKRFSSNFPGVTFYVEKLYPEKGLLVNFMASLQK 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIIL--NDGEVHRKSPIS-KDISIMKFKSYTLQTESANSST 237 + + + G + + L DG K+ +KFKSYT++ Sbjct: 181 KEKLVTAFGRRGFLRTKGDTVFLDIEDGSAQVVDWKKPKEFKFIKFKSYTVELYKFTRKE 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 A + L LL R KR +I G+I A Sbjct: 241 RFKAAKYKTLFQLLKERDKEA----------RVAVVKRTALAFASLIVGIIGFSIAVS-- 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 + + + ISL + + +++ + P+L L + Sbjct: 289 -IPRGSIGVGVLISLLLIVLYYILYTFSKKVALKTGQ--PLLALLPDVVFG 336 >gi|167580135|ref|ZP_02373009.1| hypothetical protein BthaT_18420 [Burkholderia thailandensis TXDOH] Length = 383 Score = 87.7 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 44/381 (11%), Positives = 114/381 (29%), Gaps = 28/381 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRLYEKYFARQIYVTFIFVLFAFSGLFFFFDLISELNSVGHGNYKFGYAVLRVALQAPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ ++ + + + I ++ Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLVKIGVPIVIATYLIGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF---------FRLDDDLYIKISKYNPNNTLQ 171 I P +++ +A + + ++ ++ + +P++T+ Sbjct: 121 IGPYSDQLSERVRLEALGSSVSTNFASGVWVKDTLTARDNGEPVTRFVNVGTLSPDSTIS 180 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT---- 227 + I + + +L D + + ++ + + + Sbjct: 181 DVRIYEFDSKFNLQNVRIAKSGRYQPPGHWLLTDVTDTQLTNLAGNGATAPNDTLNPVYR 240 Query: 228 ------------LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKR 275 S +++ +L L + + + Y ++ Sbjct: 241 AQQVTLPQYSLRSDLTPQILSVLLVSPERMSLFNLFR-YIQHLKENQQDTQRYDIALWRK 299 Query: 276 LTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY 335 L ++ ++S+ A I L +SF +F I + N + Sbjct: 300 LLYPFAVLVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLFNTLFSHIGTL--NTWP 357 Query: 336 IPILYLFLFCISSIFLLMIKK 356 P+ CI L K Sbjct: 358 APLTAALPGCIYLALGLFALK 378 >gi|260576762|ref|ZP_05844747.1| permease YjgP/YjgQ family protein [Rhodobacter sp. SW2] gi|259021014|gb|EEW24325.1| permease YjgP/YjgQ family protein [Rhodobacter sp. SW2] Length = 364 Score = 87.7 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 50/356 (14%), Positives = 106/356 (29%), Gaps = 11/356 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + LYI R L L I +I L ++ +S SL ++ +P+ L Sbjct: 2 TLSLYIARRFVWLLLGIILGFATILLLIDSLDQLRRLSGQGISLGQATLLAAMNMPSSLY 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + + + R++EL+++ +G S + + + A+L N + Sbjct: 62 RILPLLMILAAITLFMGLARSSELVVVRASGRSGLRFLATPVLAALLFGAVAVAVLNPLV 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFR-----LDDDLYIKISKYNPNNTLQGIFIVD 177 L +K + D I ++ N + T Sbjct: 122 AATLKRYDTLLSKYAQDGESVLSINDDGLWLRQGGPDGQTVIHAARANADGTELFSVTFL 181 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKF--KSYTLQTESANS 235 S D ++ L A L D + + + + S + Sbjct: 182 SFDAAGLPSARTEAREARLGDGAWALVDAKTWPLNLANPEASAARETGTRLPSDLTRDAI 241 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 ++ L + ++R L L LI+ A Sbjct: 242 RDSFGTPAAISIWNLPS-YIAGLERAGFSARSHRVWLQTELALPLLLAAMVLIA--AGFT 298 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 R K + ++L FG+F+ ++ + +N + + +++ Sbjct: 299 MRPTRSGKTGTYVLLALLGGFGIFFLRNFAQ-VLGENGQIPIAMAAWSPPAAAVLF 353 >gi|159043738|ref|YP_001532532.1| permease YjgP/YjgQ family protein [Dinoroseobacter shibae DFL 12] gi|157911498|gb|ABV92931.1| permease YjgP/YjgQ family protein [Dinoroseobacter shibae DFL 12] Length = 365 Score = 87.7 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 47/361 (13%), Positives = 103/361 (28%), Gaps = 9/361 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + + Y R SFL + W+ ++ + +SS L ++ +P + Sbjct: 2 TLQWYFARRFVMSFLSMLGIFAGLIWMTDTVESLRSLSSDDFGLQEAAALALLQLPATIY 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 V P + T + M R +EL++ G S I + + +A L+ N I Sbjct: 62 EVIPLIMVLATITLFLKMARTSELIVTRAAGRSAIRSLIAPVIVAGLIGGIGISVLNPIV 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFR-----LDDDLYIKISKYNPNNTLQGIFIVD 177 ++ + + T + + + I + + T+ Sbjct: 122 AATSRIAEETRDEVRGRATSVLALSSEGLWLRQAAPEGQIVIHAAGASLGGTILYDVTFL 181 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKS---PISKDISIMKFKSYTLQTESAN 234 D I + +L A L +V + + + Sbjct: 182 RFDADALPIERVAASRAELVPGAWDLTGVKVWDLTGRLNPEAGVRTSAWMQVPSDLTLDQ 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + + L + ++R H L +F V LI Sbjct: 242 IRDSFGDPSAIPIWEL-PAFIDQLEAAGFAALSHRVWLHTELASPVFLVAMVLIGAAFTM 300 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + + + + L S F+ ++ + + P + L + L++ Sbjct: 301 RHTRFGRTGLMVLFAVLLGFSMYFLKSFAQVLGEAGKIPVLAAAWFPPLAGVFLSLALLL 360 Query: 355 K 355 Sbjct: 361 H 361 >gi|254418566|ref|ZP_05032290.1| putative permease, YjgP/YjgQ family [Brevundimonas sp. BAL3] gi|196184743|gb|EDX79719.1| putative permease, YjgP/YjgQ family [Brevundimonas sp. BAL3] Length = 378 Score = 87.7 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 57/357 (15%), Positives = 117/357 (32%), Gaps = 7/357 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPT 59 + E Y+L RS ++ I + +I ++ V S S +L + P+ Sbjct: 16 LGRIERYVLIQQLRSLGVALAVISALVMLIDFVEVSRGVGSDQDLSALRILGLVALKSPS 75 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 V+ + PF F T +NR +EL+ + G S + P +A++L + Sbjct: 76 VIVQLLPFVFLFGTLAAYIGLNRRSELVAMRAAGVSAWRFVLPAAGMALVLGVLTVTVLG 135 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + ++ A+ + + ++ R DD I + + + + Sbjct: 136 PLASAGDGLWQRERARISGTAPGASSNDAIWLREGDDQRQMIIRAGRQDRANARLLDVTF 195 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDI--SIMKFKSYTLQTESANSST 237 T + S +D ++ L+ G + I + + S L + A+ Sbjct: 196 FIYTTDAEGNRDFSERIDARSAALSAGRWRLTDAVGASIGQRAVTYSSLDLLSSLADEEA 255 Query: 238 IVLKANDQNLSFLLNPN-PNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 A Q+ F PN YR F + L L +++ + Sbjct: 256 FERFARPQSTPFWSLPNQIKRIEDAGFASTAYRLRFQQLLVTPLVFAAMSILAAAFSL-- 313 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 L+R ++ + F F+ + + P + +L I + Sbjct: 314 RLMRLGDLAKMSVAAVVLGFAFFF-LNQFSSAMGSAEVVPPFVAAWLPPILTALAAF 369 >gi|52425604|ref|YP_088741.1| hypothetical protein MS1549 [Mannheimia succiniciproducens MBEL55E] gi|52307656|gb|AAU38156.1| unknown [Mannheimia succiniciproducens MBEL55E] Length = 366 Score = 87.7 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 44/357 (12%), Positives = 122/357 (34%), Gaps = 19/357 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + +S + ++ I + Q+++ + ++ +++L + G +P + Sbjct: 2 ILTRYLTKEVFKSQVAILFILLLIFFSQQLVRVLGSAANGNVPADLVLSLLGLGMPAMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P C + + +E+ ++ G + L+K L L++L + + + Sbjct: 62 LMLPLCLFIAILLTFGRLYAESEISVMRACGVGQRILVKVALGLSVLTAALAAYNVLWVS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P Q+ A+ S L F +D ++ +N + I++ +++ Sbjct: 122 PWAIQKQGQIVEDARANPNMSALSAGQFMTSNDSDFVLFIDNIKDNKISNIYLFQTKEKG 181 Query: 183 T--HKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A++G + Q + L + + S D I F Y N + Sbjct: 182 NSKPSVIVAENGELQSLPNGDQILSLQNSQRVEGSAALPDFRITNFTEYQAYLGHRNVDS 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++E + R++ L + L+++ Sbjct: 242 DENETT----------ELPLAELLALKTPAAKAELNWRISLILAVPLMALLAVPL---SK 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-PYYIPILYLFLFCISSIFLLM 353 + ++ + I +L + F S + ++ L + +++ Sbjct: 289 VNPRQGRFAKILPALLLYLIYFLLQSSLKSAGGAGKLDAGLLMPLVNLFFLLLGIML 345 >gi|15604701|ref|NP_221219.1| hypothetical protein RP871 [Rickettsia prowazekii str. Madrid E] gi|6831726|sp|Q9ZC95|Y871_RICPR RecName: Full=Uncharacterized protein RP871 gi|3861396|emb|CAA15295.1| unknown [Rickettsia prowazekii] Length = 360 Score = 87.7 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 66/363 (18%), Positives = 156/363 (42%), Gaps = 11/363 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y ++ I ++ + I W+ QIL+ + L + + ++PT+ Sbjct: 1 MLLYRKYFIKNILPLLIIVTFSVTSIVWITQILKLLYLF-DKGIKVIDFFNLVVLVLPTL 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + + ++ +L+I+ +G + I L P L++A+ + + + + Sbjct: 60 LFILLPIITVIAVLYIYNNLKVERQLIILQTSGVNNIQLALPALYVALTIMLLAYYISST 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P +K + S +EE F ++ ++ + I K N + GI I D+R+ Sbjct: 120 ILPLSHINLKSRLNFIKNNYISSMIEEKTFNKITKNITVFIDKKLTGNIMNGIIIFDNRN 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI-SKDISIMKFKSYTLQTESANSSTIV 239 + +A SG++++ I + R+ + +++ + F S ++ ++ +S T Sbjct: 180 ADNPSVVFAGSGTLNIYGNNPIFELNKGLRQEYDANGNLTQLTFDSLMIKLQNNSSLTSQ 239 Query: 240 L-----KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 +AN+ +S LL P+ + + +E H+R+ L+ + +++ Sbjct: 240 RTQNNKEANEYYISELLTPSHDLVITKKI---KLIAEAHQRIIWPLYNFVLPCLALAVFL 296 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + ++ + +F +L++ F F + + +N +I Y L +I L ++ Sbjct: 297 RYPYSKKTTFMPVLFSALTVLFVTAIHF-ILQNFASKNLDFIFACYFNLLVALTIGLYLL 355 Query: 355 KKK 357 K Sbjct: 356 VHK 358 >gi|157368808|ref|YP_001476797.1| permease YjgP/YjgQ family protein [Serratia proteamaculans 568] gi|157320572|gb|ABV39669.1| permease YjgP/YjgQ family protein [Serratia proteamaculans 568] Length = 364 Score = 87.4 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 53/356 (14%), Positives = 131/356 (36%), Gaps = 19/356 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + +++ + N++L + +P + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFCQNLVRVLGDAVDGDVPTNLVLSLLALGVPKMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + ++E+ ++ G + TLI + LA+ S+ + + Sbjct: 62 LILPLSLFLGLLMTLGRLYTDSEITVMHACGLGKRTLIIAAMVLALFTSVIAAANVFWVG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + ++A+ + + L E F D + +T +F+ R Sbjct: 122 PWASRYQDVVVSEAKANPSIAGLAEGQFKTSQDGNAVLFIGNVKGSTFNNVFLAQLRPNG 181 Query: 183 T--HKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G I+ + Q + L+ G + + +D I F Y + Sbjct: 182 NQRPSVVVAEHGQINQMKDGSQVVTLDKGTRFEGTALLRDFRITDFNDYKAVVGHRAVTV 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +A ++ LL + + R+EFH RLT L VI L+ Sbjct: 242 DGNQAEQMSMKTLLASDDPDA----------RAEFHWRLTLVLSVVIMALL---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + ++ ++ + ++ + F + + + P+++L++ + + + Sbjct: 289 VNPRQGRVLSMLPAILLYLIFFLLQTSLRSNGGK-GKLDPMVWLWVVNAAYFAIAL 343 >gi|114797170|ref|YP_760296.1| putative permease [Hyphomonas neptunium ATCC 15444] gi|114737344|gb|ABI75469.1| putative permease [Hyphomonas neptunium ATCC 15444] Length = 391 Score = 87.4 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 50/363 (13%), Positives = 121/363 (33%), Gaps = 15/363 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y++R F + + + + ++++ +VS S + + LIP L Sbjct: 4 RLDRYLIRSFLGMFAGLTVLAMALLLLERLIRITEIVSGSGSAFASASLLVANLIPHYLN 63 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P F + + ++R+ E++ + G S ++ P + +++L+ + ++ Sbjct: 64 LALPGAFLISMILTIDRLSRSGEIVALMAAGVSLYRIVLPFVQFSLVLAAASLLISGFLQ 123 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P R + +++ Q S +E F + D+ + P L FI++S Sbjct: 124 PLSRYSYREIVYNLQHQSVLSVFQEQKFVQYDNRIIWT-DSVLPGGRLGQTFILESEPDG 182 Query: 183 THKIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE----SANS 235 + SG I I L G + + L + Sbjct: 183 ARTLLTGGSGKLREIRAGEWEITLLGGAGASYRDADPPEEYDRIEYGELSWPVIAETGQY 242 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + L LL + FH R ++ + LI+I+ Sbjct: 243 RARGGDERELFLPELLAK-AGAAMPGDIAPAVAAATFHDRTSRAALLLAMPLIAIILGLN 301 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF--CISSIFLLM 353 + + + + + GV Y + + + P + + +++ + + Sbjct: 302 LG---RVARSSGVVLGILFLLGVQKVLEYTLVQTSE-GVIPPWMGFWPIVVVVAAASIFL 357 Query: 354 IKK 356 ++ Sbjct: 358 FRR 360 >gi|94495766|ref|ZP_01302346.1| permease YjgP/YjgQ [Sphingomonas sp. SKA58] gi|94425154|gb|EAT10175.1| permease YjgP/YjgQ [Sphingomonas sp. SKA58] Length = 402 Score = 87.4 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 62/360 (17%), Positives = 132/360 (36%), Gaps = 14/360 (3%) Query: 5 ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 + Y+ R I L + + + + ++L + V++ ++++ ++ ++P L + Sbjct: 6 DRYLARLIAVPMLGTLVIAAMLLVLDKMLSLFDFVAAEGGPVSVVWRMLANMLPEYLSLG 65 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P + + ++EL ++ G S L++ AI L++ F ++P Sbjct: 66 IPIGLMLGILLAFRKLAMSSELDVMRAVGLSYGRLLRVPYMYAIALALINFGIVGFVQPL 125 Query: 125 CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKI-SKYNPNNTLQGIFIVDSRDTQT 183 R + L + + + ++ F L + ++I + LQGIF+ + Sbjct: 126 SRHAYEALRFELRSGALGASIKVGEFTNLGKRMTLRIERSRDQGRNLQGIFVRATSRDGQ 185 Query: 184 HKIYYAQSGSIDLDRQ----AIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 A G+ L DG + +P K I+ F S+ L + + Sbjct: 186 SVAVTAAQGTFLATDDPDVIIFRLRDGVLVNDAPKYKTPRILSFSSHDLPIDLPQIESFR 245 Query: 240 LKANDQ--NLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ND+ + L+ N P+L R+ FH R+ + V L+ + A Sbjct: 246 GRDNDREKTIPELVVIGKNQA-TPPKLRNEVRANFHFRMVE---VVFMLLLPLAALAFAI 301 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF--LFCISSIFLLMIK 355 ++ +F+S+ Y + PI+ L+ S + L M Sbjct: 302 PPKRSTSALGVFLSIVFIVTYHKVNQY-GESVGALGKIDPIIALWGPFLLASGLVLWMYH 360 >gi|313674336|ref|YP_004052332.1| permease yjgp/yjgq family protein [Marivirga tractuosa DSM 4126] gi|312941034|gb|ADR20224.1| permease YjgP/YjgQ family protein [Marivirga tractuosa DSM 4126] Length = 549 Score = 87.4 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 42/268 (15%), Positives = 95/268 (35%), Gaps = 7/268 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + ILR FL++ +VFI +L+ + ++ ++ Y + Sbjct: 1 MKKIDKLILRSFIGPFLITFFVVVFILLTQYMLKYFDDFVGKDLGFSVFAELIAYFSINM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 P+ P + + ++ + EL I + G S + +++P+ + LS ++ S N Sbjct: 61 TPIAFPLAVLLSSLMTFGNLGEHFELTAIKSAGISLVRVLRPLFVFVVCLSAVVYYSNNF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTL-QGIFIVDSR 179 I PK L + ++E F+ IK +K ++ + I + Sbjct: 121 IVPKANLEAYSLLYDIKQKKPSIDIKEGAFYGGIPGYSIKANKKYDDDKSLGDLIIYNHS 180 Query: 180 DTQTHKIYYAQSGSIDLD-----RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 D + + ++ + L DG+ + + +K + + + Sbjct: 181 DRKGNTEIILADSALMYTILGDKYLVMELFDGKSYTEEEANKPQEPSNYVRNIFK-HNKV 239 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRP 262 ++ ++ L + N N Sbjct: 240 VFSLASFEMERTDKELFSSNRLMKNENE 267 Score = 48.5 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 17/115 (14%), Positives = 44/115 (38%), Gaps = 8/115 (6%) Query: 251 LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFI 310 L R + Y E + +L+Q + ++ LI A A++++ P+ + Sbjct: 418 LKGENRRIENRKFEINVYSIEANSKLSQAVACIVMFLIG---APLGAIIKKGGLGFPVIV 474 Query: 311 SLSISFGVFWGFSYIIHKIEQNPYYIPILYLF--LFCISSIFLLMIK--KKYTKI 361 S+ F V + + K+ + ++ F + L ++ + +++ Sbjct: 475 SILF-FIVSYVINTTGIKLGRAGDISNFWAVWASNFVLLPFGLFFLRQARNDSRL 528 >gi|83720791|ref|YP_441377.1| hypothetical protein BTH_I0821 [Burkholderia thailandensis E264] gi|167618241|ref|ZP_02386872.1| hypothetical protein BthaB_18181 [Burkholderia thailandensis Bt4] gi|257139950|ref|ZP_05588212.1| hypothetical protein BthaA_12230 [Burkholderia thailandensis E264] gi|83654616|gb|ABC38679.1| membrane protein, putative [Burkholderia thailandensis E264] Length = 383 Score = 87.4 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 44/381 (11%), Positives = 113/381 (29%), Gaps = 28/381 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRLYEKYFARQIYVTFIFVLFAFSGLFFFFDLISELNSVGHGNYKFGYAVLRVALQAPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ ++ + + + I ++ Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLVKIGVPIVIATYLIGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF---------FRLDDDLYIKISKYNPNNTLQ 171 I P +++ +A + + ++ ++ + +P++T+ Sbjct: 121 IGPYSDQLSERVRLEALGSSVSTNFASGVWVKDTLTARDNGEPVTRFVNVGTLSPDSTIS 180 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT---- 227 + I + + +L D + + ++ + + + Sbjct: 181 DVRIYEFDSKFNLQNVRIAKSGRYQPPGHWLLTDVTDTQLTNLAGNGATAPNDTLNPVYR 240 Query: 228 ------------LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKR 275 S +++ +L L + + + Y ++ Sbjct: 241 AQQVTLPQYSLRSDLTPQILSVLLVSPERMSLFNLFR-YIQHLKENQQDTQRYDIALWRK 299 Query: 276 LTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY 335 L + ++S+ A I L +SF +F I + N + Sbjct: 300 LLYPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLFNTLFSHIGTL--NTWP 357 Query: 336 IPILYLFLFCISSIFLLMIKK 356 P+ CI L K Sbjct: 358 APLTAALPGCIYLALGLFALK 378 >gi|297172254|gb|ADI23232.1| predicted permeases [uncultured nuHF2 cluster bacterium HF0770_13K08] Length = 351 Score = 87.4 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 119/355 (33%), Gaps = 14/355 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K YI R F++ V ++ V + V + +S L+ + L+P +L Sbjct: 4 KIISKYIASEFNRYFMLFLGAFVLMSLVGNFFGNLADVFTDWQSFLKFLQETALLLPLLL 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 ++ P + T +S+N+N ELL I ++G L PVL ++ L++ F + S+N + Sbjct: 64 ELIIPITVLLATIATYSSLNKNAELLAIRSSGIGGWRLAFPVLAVSALIASFAYFSQNYM 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 T + A+L L+ ++ N + I + + Sbjct: 124 YTWMHQTWVKQENSARL--------PPLWKVGEEQSIYYFGNRQHNGRISSITSFNWKQI 175 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + + + I +D + + + + ++ + I + Sbjct: 176 PFQLLGRTAIERGEQQNNSWIFHDIQKYIFQDENLRLEHVEQWRIETEKLPTVPFDIPIS 235 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + Q L L + + Y ++ I LI + + R+ Sbjct: 236 PHHQPLLDLYENTLK-LQSEGQDVTRYWVAIFQKTAYPFQIFIMVLIGL--GLSASYNRR 292 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF--LFCISSIFLLMI 354 + IS + +FW + I + P + ++ L ++ Sbjct: 293 GMAAESLAISCLLGI-LFWILNQITMAVGGAGLIFPFFAAWSGNIIFLALALWLL 346 >gi|261364965|ref|ZP_05977848.1| permease, YjgP/YjgQ family [Neisseria mucosa ATCC 25996] gi|288566762|gb|EFC88322.1| permease, YjgP/YjgQ family [Neisseria mucosa ATCC 25996] Length = 371 Score = 87.4 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 42/365 (11%), Positives = 146/365 (40%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ ++ + + + + ++ + Q + + + +++ +L + G+ + + P Sbjct: 2 IYQRNFIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ +I + + + + Sbjct: 62 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAILIAVMQLWVM 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFF---RLDDDLYIKISKYNPNNTLQGIFIVDSR 179 P ++ + + S +E F + + +Y + + ++ +F+ + Sbjct: 122 PWAELRSREYAEILKQKQELSMVEAGEFNSLGKRNGRVYFVETFDTESGIMKNLFLREQD 181 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANSS 236 I +A+ G S++ +++ + L +G + +P D + + F++ +L + Sbjct: 182 KNGNDNIIFAKEGNFSLNDNKRTLDLRNGYRYSGTPGKADYNRVSFQNLSLIISTTPKLI 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V S L+ +++E R++ + ++ ++A Sbjct: 242 DPVSHRRTIPTSQLI----------GSSNPQHQAELMWRISLTVSVLLLC---LLAVPLS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMI 354 + + I +++ + G +++ + + + +++ +L + + + +L+ Sbjct: 289 YFNPRSGHTYNILVAIGLFLIYQNGLTFLRNAVEDGKIHFWLGLLPMHIIMFAIAVVLLR 348 Query: 355 KKKYT 359 + Sbjct: 349 VRSMP 353 >gi|190891135|ref|YP_001977677.1| permease [Rhizobium etli CIAT 652] gi|190696414|gb|ACE90499.1| putative permease protein [Rhizobium etli CIAT 652] Length = 362 Score = 87.4 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 42/353 (11%), Positives = 109/353 (30%), Gaps = 10/353 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + Y R + + IA+++ + +S ++ + ++ +P +L Sbjct: 5 TLSRYFFRRYVATTGWFLIGASAIAFLLDFSETAGRMSGLPGYTIGGGIVMTAVRLPLIL 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PF VL +NR EL++ G S + P + ++ L + + N + Sbjct: 65 QQTIPFVALFVGMTVLIGLNRKYELVVTRAAGISVWQFMFPFIAGSLALGVLTTTALNPL 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 + + + + + + D Sbjct: 125 AAWGQRQALLVESDWRGENAVLRKAPQIPWLRQ---ISGRDDVIIGAQTVQENGTKLIDA 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + + D L DG + + + + ++Q + V + Sbjct: 182 VLIHFDSSGRVILRQDAATAKLEDGYWQLNGVVERKPGEIPLRKASVQLRTNLKQDFVQE 241 Query: 242 ---ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 A + F L+ + ++F+ L+Q L V LI+ + K + Sbjct: 242 RLTAPETIGFFDLSNRIAAAKSFGISTKALETQFNSLLSQPLLLVAMTLIAATVSLKFSR 301 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 Q + + + +S + + + ++ + P + ++ + ++ L Sbjct: 302 FNQSR---SVILGGILSGFMLYVITVLVKAFGSSGVVPPFVATWIPVVVALAL 351 >gi|163759135|ref|ZP_02166221.1| putative permease [Hoeflea phototrophica DFL-43] gi|162283539|gb|EDQ33824.1| putative permease [Hoeflea phototrophica DFL-43] Length = 345 Score = 87.4 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 50/341 (14%), Positives = 110/341 (32%), Gaps = 10/341 (2%) Query: 14 RSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTVLPMVTPFCFAME 72 +FL CL I+ I ++ + +S++ ++ L +S +PT+L PF + Sbjct: 1 MTFLTYCLAILVIILLVDFNESGRRLSAAPEYTVTTGLLVSALRVPTILQAAIPFVVLIA 60 Query: 73 TTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS--TIK 130 + L +NR EL++ G S + P++ +L+ N Sbjct: 61 SIATLLQLNRKYELVVARAAGISAWQFLAPLVAANLLIGFIAVAGLNTFAASAMQWAETI 120 Query: 131 QLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQ 190 + A + D + T D + + Sbjct: 121 IVERNLGSAQSSDSAPWLRQRTEQGDTVLGARASAAGGTRLSGATFFLFDEDQNIKERLE 180 Query: 191 SGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFL 250 + + L +L + R S+ + ++ S ++ + + L Sbjct: 181 AETAVLGDGEWVLTNVRRIR---GSEPVEQVESASVPTSLKAEFVGESLTSPDTVPFFEL 237 Query: 251 LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFI 310 + ++ +Y +FH+ + Q LI+ + + VR + + I Sbjct: 238 RDKIAVAKSF-GLSATSYEMQFHRLVAQPALLAAMTLIAAIVSL--KFVRFGQSLTVILG 294 Query: 311 SLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + F ++ S +I PI+ +L + + L Sbjct: 295 GILAGFVLYVV-SELIQAFANAGTIPPIVAAWLPVLVASAL 334 >gi|145641036|ref|ZP_01796617.1| predicted permease [Haemophilus influenzae R3021] gi|145274197|gb|EDK14062.1| predicted permease [Haemophilus influenzae 22.4-21] Length = 336 Score = 87.4 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 44/324 (13%), Positives = 116/324 (35%), Gaps = 15/324 (4%) Query: 33 LQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNT 92 ++ + ++ +++ + G +PT+ ++ P C + + +E+ ++ Sbjct: 1 MRVLGAAANGNVPADLVFSLLGLGMPTMAQLMLPLCLFIAILLTFGRLYAESEITVMRAC 60 Query: 93 GTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFR 152 G + L+K L +++L + + + P + A+ T L F Sbjct: 61 GVGQRILVKVALIMSLLTAGIAAYNALWLSPWAIQKQVNMVEDAKANPTVGVLSSGQFIS 120 Query: 153 LDDDLYIKISKYNPNNTLQGIFIVDSRDTQ--THKIYYAQSGSI---DLDRQAIILNDGE 207 +++ + +N ++ +++ + + A+ G + Q + L + + Sbjct: 121 TNNNNVVLFIDKIKDNQIRNVYLFQMTPQKQTKPSVITAEKGELIALPNGDQVLNLKNTK 180 Query: 208 VHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLET 267 + + D I F Y ++ + + LS L++ + ++ Sbjct: 181 RVEGTSVLPDFRITHFDEYQAYLGYQSAENTNDEVAELTLSQLIDLDSSSA--------- 231 Query: 268 YRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH 327 ++E H R+T L + LI++ + + KI P + I F + F Sbjct: 232 -KAELHWRITLILAVPLMALIAVPLSRVNPRQGRFAKILPALLLYLIYFLLQSSFKSAGS 290 Query: 328 KIEQNPYYIPILYLFLFCISSIFL 351 + + L F + ++ L Sbjct: 291 AGKLEAELLIPLVNIGFFLLAVVL 314 >gi|255066291|ref|ZP_05318146.1| permease, YjgP/YjgQ family [Neisseria sicca ATCC 29256] gi|255049501|gb|EET44965.1| permease, YjgP/YjgQ family [Neisseria sicca ATCC 29256] Length = 371 Score = 87.4 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 41/365 (11%), Positives = 146/365 (40%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ ++ + + + + ++ + Q + + + +++ +L + G+ + + P Sbjct: 2 IYQRNFIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ ++ + + + + Sbjct: 62 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFALLIAVMQLWVM 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFF---RLDDDLYIKISKYNPNNTLQGIFIVDSR 179 P ++ + + S +E F + + +Y + + ++ +F+ + Sbjct: 122 PWAELRSREYAEILKQKQELSMVEAGEFNSLGKRNGRVYFVETFDTESGIMKNLFLREQD 181 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANSS 236 I +A+ G S++ +++ + L +G + +P D + + F++ +L + Sbjct: 182 KNGNDNIIFAKEGNFSLNDNKRTLDLRNGYRYSGTPGKADYNRVSFQNLSLIISTTPKLI 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V S L+ +++E R++ + ++ ++A Sbjct: 242 DPVSHRRTIPTSQLI----------GSSNPQHQAELMWRISLTVSVLLLC---LLAVPLS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMI 354 + + I +++ + G +++ + + + +++ +L + + + +L+ Sbjct: 289 YFNPRSGHTYNILVAIGLFLIYQNGLTFLRNAVEDGKIHFWLGLLPMHIIMFAIAVVLLR 348 Query: 355 KKKYT 359 + Sbjct: 349 VRSMP 353 >gi|261345122|ref|ZP_05972766.1| inner membrane protein YjgP [Providencia rustigianii DSM 4541] gi|282566810|gb|EFB72345.1| inner membrane protein YjgP [Providencia rustigianii DSM 4541] Length = 365 Score = 87.4 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 52/357 (14%), Positives = 129/357 (36%), Gaps = 19/357 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + + + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFVLLLIFFSQMSIDILGAAVQGNIPSNLVLPLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + + +E+ ++ G + L+K L LA+L ++ + + Sbjct: 62 LILPLSLFLGLLMTYSKLYTESEITVMHACGLGKNVLVKAALVLAVLTALVAIANITWML 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +Q+ A+ + + E F D+ ++ N + +F+ R Sbjct: 122 PWSSQYKEQVLGDAKANPGLAAMVEGQFKTTKDNNFVLYIGEVKGNDFKNVFLAQLRTAN 181 Query: 183 --THKIYYAQSGSIDLD---RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + D RQ ++L+ G + + + +D I F +Y + + Sbjct: 182 EQRPSVVVADSGYMKEDANGRQVVVLDQGTRYEGTALLRDFRITDFMNYQAVVDHRTTEV 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 K + + L N +EFH RLT V+ L+ Sbjct: 242 RTDKVEQKTMMQLWNG----------NDPEINAEFHWRLTIVFSVVVMALM---VVPLSE 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI-PILYLFLFCISSIFLLM 353 + ++ ++ + ++ + F S + + ++ ++ ++ +++ Sbjct: 289 VNPRQGRVLSMIPAMLLYLIFFLLQSTLRNSADKGDIDPKYAMWAVNLGYLALAIVL 345 >gi|167561902|ref|ZP_02354818.1| hypothetical protein BoklE_05005 [Burkholderia oklahomensis EO147] gi|167569154|ref|ZP_02362028.1| hypothetical protein BoklC_04865 [Burkholderia oklahomensis C6786] Length = 382 Score = 87.4 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 47/380 (12%), Positives = 114/380 (30%), Gaps = 27/380 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRVYEKYFARQIYVTFVFVLFAFSGLFFFFDLIGELNSVGHGNYKFGYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + V M N+E I +G + ++ +L + + + I ++ Sbjct: 61 FYEIIPVAALISSIYVFAQMAANSEFTIFRVSGLATNQALRSLLKIGVPIVIATYLIGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF---------FRLDDDLYIKISKYNPNNTLQ 171 I P +++ +A + + ++ ++ + + +P++T+ Sbjct: 121 IGPYSDQLSERVRLEALGSSVSTNFASGVWVKDTLTARDNGEPVTRFVNVGQLSPDSTIS 180 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK--------------- 216 + I + + +L D + + +S Sbjct: 181 DVRIYEFDSKFNLQNVRIAKRGRYQPPGHWLLTDVTDTQLTNVSGAGGQPADALNPVYRA 240 Query: 217 DISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRL 276 + S S +++ +L L + + + Y ++L Sbjct: 241 RQVTLPQYSLRSDLTPQILSVLLVSPERMSLFNLFR-YIQHLKENQQDTQRYDIALWRKL 299 Query: 277 TQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 + ++S+ A I L +SF +F I + N + Sbjct: 300 LYPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLFNTLFSHIGTL--NTWPA 357 Query: 337 PILYLFLFCISSIFLLMIKK 356 P+ CI L K Sbjct: 358 PLTAALPGCIYLALGLFALK 377 >gi|87198521|ref|YP_495778.1| permease YjgP/YjgQ [Novosphingobium aromaticivorans DSM 12444] gi|87134202|gb|ABD24944.1| permease YjgP/YjgQ [Novosphingobium aromaticivorans DSM 12444] Length = 414 Score = 87.4 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 57/368 (15%), Positives = 134/368 (36%), Gaps = 19/368 (5%) Query: 1 MKSF---ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLI 57 MK + YI R + L + + + ++L+ + V++ ++++ K+ L+ Sbjct: 1 MKLLTATDRYIARLVFVPMLSVFVLAASLLILDKMLKLFDFVATQGGPVSVVFKMLANLL 60 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 P + P + + ++EL ++ G S L++ AI L+ + Sbjct: 61 PEYASLAIPLGLMLGILFAFRKLAMSSELDVMRAVGLSYTRLLRVPYMFAIALAALNLLI 120 Query: 118 ENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS-KYNPNNTLQGIFIV 176 + ++P R +QL + + + + F L D +++ + L+GIF Sbjct: 121 VSYLQPLSRYYYEQLQFELRSGALGASIRVGEFNSLQDRTALRVDASRDEGRDLRGIFAR 180 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAI-----ILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 + A+ G +R++ L DG++ + P ++ F S+ L + Sbjct: 181 IQTANGQVMVISAREGRFFANRESPDTVILRLTDGQIVQDGPGIASPRVLSFASHDLPID 240 Query: 232 SANSSTIVLK---ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 + + L LL N+ Y E+ ++ + RL + V+ L+ Sbjct: 241 LPRIEQFRQRGDADREYFLPELLQIGWND-RYSEEIRNQSKASLNYRLVE---VVMMFLL 296 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSY---IIHKIEQNPYYIPILYLFLFC 345 ++A ++ +F+S+ + Y + +P +F Sbjct: 297 PLLAVALAVPPKRSTSALGVFLSIVLVVAYHKVNQYGQDVAALGRMDPVIALWGPFVVFA 356 Query: 346 ISSIFLLM 353 +++ Sbjct: 357 ALIVWMYW 364 >gi|71899265|ref|ZP_00681427.1| permease YjgP/YjgQ [Xylella fastidiosa Ann-1] gi|71730998|gb|EAO33067.1| permease YjgP/YjgQ [Xylella fastidiosa Ann-1] Length = 385 Score = 87.4 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 43/368 (11%), Positives = 117/368 (31%), Gaps = 13/368 (3%) Query: 1 MKSF----ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYL 56 MK F + Y+ R + + L++ L ++ + V + + + S + Y Sbjct: 18 MKLFPCLHDRYVARAVVATVLLTWLVLLGLDVVNGFASEVRDIGKGSYSFGHAIAYIAYT 77 Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 +P + P + L + +EL + G SR L V+ + + + + + Sbjct: 78 VPRRAYTLFPTAAVIGMLLGLGQLAATSELTALRALGVSRKRLSLSVMMVIGMGTGLMAL 137 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI- 175 + + P ++ L A A+ + + F+ + ++++ G + Sbjct: 138 TGETLGPWAQAQADILKASAKYKSDMTGARYSGFWAREGEVFLNARSGEEKRLDSGGIML 197 Query: 176 ------VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ 229 + ++ ++ + IL + S + + Sbjct: 198 ILHDVRLYQLAADGRLQSMTRAARVEHHQDVWILQQVQRDTFSERGVQRETFHSLPWRSR 257 Query: 230 TESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 + A + + K + ++ L+ + + ++ R + + L + Sbjct: 258 LDPAALAAGLAKPRNLSVHELVQ-SIEYRRRNHLDARDFEGQYWSRWFYPINVLALCLAA 316 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 I + K + I ++SF + F I + + Y L + Sbjct: 317 IPFSFGLLRSGGMGKRTFLGILFALSFWMLQMFFERIASVLK-LNYQIFYLLPPMVMLCG 375 Query: 350 FLLMIKKK 357 + +++ Sbjct: 376 SYWLFRRQ 383 >gi|197105169|ref|YP_002130546.1| hypothetical protein PHZ_c1706 [Phenylobacterium zucineum HLK1] gi|196478589|gb|ACG78117.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1] Length = 367 Score = 87.4 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 46/362 (12%), Positives = 108/362 (29%), Gaps = 13/362 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPT 59 + E Y++ + + I + +IQ ++ + V + + + ++ P+ Sbjct: 4 LGRLERYVMGRMLAGVGAALAVISAVILLIQFVELSSQVGTRADVGASGIFALTLLRAPS 63 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ ++ PFCF +NR +EL+ + G S I P LA +L + N Sbjct: 64 LIQILLPFCFLFGGIGAFVGLNRKSELVAMRAAGVSAWRFILPSAALAAILGVLAVAVLN 123 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQ-------G 172 + + A+ ++ + D+ I I + Sbjct: 124 PFAAALNARFEAERARLMENYLGDRPQDVWIRQGDERTQIVIHAKDRETVAGAVVLKGVS 183 Query: 173 IFIVDSRDTQTHKIYYA-QSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 +FI + + ++ L L D S + +S + Sbjct: 184 VFIYEKTPRGAPEFRRRLEAAEARLMPGFWRLRDVREAGVGESSIRSESLSIRS---TLD 240 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 + + L YR F + L + +++ Sbjct: 241 AEAAMERFASPEAIAFWRL-PAAIRLTEQAGFSAAGYRLRFQQLLATPVLFAAMTVLAAA 299 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + + + + ++L F F+ + K + P + L + + Sbjct: 300 FSLRLVRLGGLAGLAGAGVALGFVMFFFNQFAGALAKADILPLFAAAWAPTLVALLAGVT 359 Query: 352 LM 353 L+ Sbjct: 360 LL 361 >gi|94987323|ref|YP_595256.1| permease [Lawsonia intracellularis PHE/MN1-00] gi|94731572|emb|CAJ54935.1| predicted permeases [Lawsonia intracellularis PHE/MN1-00] Length = 366 Score = 87.4 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 46/351 (13%), Positives = 114/351 (32%), Gaps = 7/351 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+++ + L++ + + + + +R++ + S I+L Y P Sbjct: 1 MSLLFRYLIKNNTKILLLTLTIGIGVYILTDLFERLDNFIEAHTSTKIILTYFIYKTPFA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + PF F + T L M + EL+ + G S + ++ ++ FI Sbjct: 61 IAQILPFIFLISTVIQLCIMAKKKELIALQAGGISFTRIASIIIIASLFWGTIQFIFSEY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I C Q+ + S + D + + I+ P++T G Sbjct: 121 IGTACGRKSLQIWQEYVHNQHKSKTILKDIWFTDKNWIVSINTLKPDDTGSGFSAYLLDK 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + S + IL V + S+++ ++ +E+ Sbjct: 181 NGLTIEKIIWALSFSIHNNEWILKKVAVSEPALYSQEMLQELTLTFNQSSETLKFIQNNN 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + L + +E ++ +H +L+ V+ L++ Sbjct: 241 APQQLSFWEL-RETIHKLERSGSNVELLKTSWHTKLSYSFSLVVMALLATTIVAW----- 294 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + I+ + ++ + I + PI+ ++ + + + Sbjct: 295 -KNNIYIAIAFSLLYTFIYNALNTIGISLGNKGIISPIIGAWIANLVIMSV 344 >gi|269121332|ref|YP_003309509.1| permease YjgP/YjgQ family protein [Sebaldella termitidis ATCC 33386] gi|268615210|gb|ACZ09578.1| permease YjgP/YjgQ family protein [Sebaldella termitidis ATCC 33386] Length = 360 Score = 87.4 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 51/361 (14%), Positives = 116/361 (32%), Gaps = 9/361 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YIL + F++ L + I + + + + +L + Y +P + Sbjct: 1 MNKLDRYILINYIKGFILGMLMFLLIFLLAESINVTGWIMEDKFTLKDSMVYIKYGLPEI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + + ++ M + E+ + G S + + + L+S+F Sbjct: 61 LVNTAPLGILLGSLLSISKMAQRLEITAVKTAGISFRRFVLFPILFSALVSVFTVYISIN 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT---LQGIFIVD 177 I P+ +++ + + E + D + N ++GI IVD Sbjct: 121 ILPEANKMKREMKDRKLKEDDQTKKNEKKDVYIKLDKNRMLYASYVNKNKNLMEGIMIVD 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + S S + Q+ I + G + + + + L+ Sbjct: 181 FHENLNGIKSIYVSPSATYNSQSKIWDFGSLKELDVEKNMENEILSSEFQLRATPNEILE 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +KA + L L + SE + RL+ I I + K Sbjct: 241 DQVKAKELTLKELREKSVYYSRV-GANTNDLFSELYNRLSFTFASFIMSFIGLSLGSKYV 299 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--FCISSIFLLMIK 355 + I +S+ I + + + + + + +L ++ + + + Sbjct: 300 ---RGGAAINIGLSVLIGYSYYGISTMLRSMGPVVSVFPLYITAWLTNIVFFALGVYLFR 356 Query: 356 K 356 K Sbjct: 357 K 357 >gi|294637821|ref|ZP_06716093.1| inner membrane protein YjgP [Edwardsiella tarda ATCC 23685] gi|291089020|gb|EFE21581.1| inner membrane protein YjgP [Edwardsiella tarda ATCC 23685] Length = 366 Score = 87.0 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 52/345 (15%), Positives = 130/345 (37%), Gaps = 19/345 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + V + N++ + G IP + Sbjct: 2 IIIRYLVRETFKSQVAILFILLLIFFCQKMVRILGAVVNGDIPTNLVFSLLGLGIPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G + LIK + LA + + Sbjct: 62 LILPLSLFLGLLMTLGRLYTESEITVMHACGLGKSVLIKAAMVLAFFTGALALANAFWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L E F D Y+ + +F+ R + Sbjct: 122 PWSSLHSDEVMAEAKANPGLASLAEGQFQPSQDGNYVLFVGNVKDKKFHDVFLAQLRPSG 181 Query: 183 --THKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q ++L+ G + + + +D I F Y+ ++ Sbjct: 182 SQRPSVVVADSGHLVEMKDGGQKVVLDSGTRYEGTAMLRDFRITDFVDYSALIGHKSTML 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 A+ ++S L + + ++R+EFH RLT ++ L+ Sbjct: 242 DPNNADQASMSALWHSDE----------PSFRAEFHWRLTLVFSVLVMALM---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 + ++ ++ + ++ + F S + + P+++++ Sbjct: 289 VNPRQGRVLSMLPAMLLYLIFFLLQSSLRSNGGK-GKLDPMIWMW 332 >gi|312795337|ref|YP_004028259.1| hypothetical protein RBRH_03151 [Burkholderia rhizoxinica HKI 454] gi|312167112|emb|CBW74115.1| Hypothetical membrane spanning protein [Burkholderia rhizoxinica HKI 454] Length = 365 Score = 87.0 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 51/362 (14%), Positives = 124/362 (34%), Gaps = 21/362 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 E + R + + L ++ + +++ + +S ++ + G + + + Sbjct: 2 ILERSLQRELAYTAGAVFLVLLTLVLTTMMIRIVGFAASGQIDPRDVVVLIGLTMISYVA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VLT R++E+++ + G S LIKP+ A + + + + Sbjct: 62 VMLIATLFVSILFVLTRWYRDSEMVVWLSCGVSLTRLIKPIATFAAPIVVLIAFFAFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P K + + Q S L F + + + + + + + Sbjct: 122 PWANEQSKLIRERFQQRDEVSLLAPGQFRESAANHRVFFIEKMSPDQGRVENVFVTSTEN 181 Query: 183 THKIY----YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + ++L +G + P D IM+F Y ++ +S Sbjct: 182 GKVNVVVSKTGHTEIHPNGDRFVVLENGRRYDGEPGKPDFRIMEFARYGVKIQSRQLVNR 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + + L PNP + +EF R L + L++I A Sbjct: 242 PTTTSLPTATLLREPNPTHL-----------AEFAWRAGLPLTALNLMLLAIPLAY---Q 287 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN--PYYIPILYLFLFC-ISSIFLLMIK 355 +R + + +++ I + + IEQ + +L L + +F+ ++ Sbjct: 288 NPRRGRTINLVLAVLIYLTYSNLMNLVQAWIEQGKVAFVPGLLGLHVIVSAIVVFVFWLR 347 Query: 356 KK 357 + Sbjct: 348 VR 349 >gi|261377636|ref|ZP_05982209.1| permease, YjgP/YjgQ family [Neisseria cinerea ATCC 14685] gi|269146390|gb|EEZ72808.1| permease, YjgP/YjgQ family [Neisseria cinerea ATCC 14685] Length = 371 Score = 87.0 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 42/365 (11%), Positives = 146/365 (40%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ ++ + + + + ++ + Q + + + +++ +L + G+ + + P Sbjct: 2 IYQRNFIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ +I + + + + Sbjct: 62 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAILIAVMQLWVM 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFF---RLDDDLYIKISKYNPNNTLQGIFIVDSR 179 P ++ + + S +E F + + +Y + + ++ +F+ + Sbjct: 122 PWAELRSREYAEILKQKQELSMVEAGEFNSLGKRNGRVYFVETFDTESGIMKNLFLREQD 181 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANSS 236 I +A+ G S++ +++ + L +G + +P D + + F++ +L + Sbjct: 182 KNGKDNIIFAKEGNFSLNDNKRTLDLRNGYRYSGTPGKADYNRVSFQNLSLIISTTPKLI 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V S L+ +++E R++ + ++ ++A Sbjct: 242 DPVSHRRTIPTSQLI----------GSSNPQHQAELMWRISLTVSVLLLC---LLAVPLS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMI 354 + + I +++ + G +++ + + + +++ +L + + + +L+ Sbjct: 289 YFNPRSGHTYNILVAIGLFLIYQNGLTFLRNAVEDGKIHFWLGLLPMHIIMFAIAVVLLR 348 Query: 355 KKKYT 359 + Sbjct: 349 VRSMP 353 >gi|262341159|ref|YP_003284014.1| putative YjgP/YjgQ family permease [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272496|gb|ACY40404.1| putative YjgP/YjgQ family permease [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 359 Score = 87.0 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 52/362 (14%), Positives = 120/362 (33%), Gaps = 11/362 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESL-NILLKISGYLIPT 59 MK + YI+R + +F+ + + ++ VI I QR++ + ++ S+ L+ Y Sbjct: 1 MKILDRYIIRNLLITFIFITVSLQLLSVVIDISQRMHRLENNQGSIKKALIFYYPYWSIW 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + +P + + + N+E+ I ++G S LI P L AI++ + Sbjct: 61 LANTFSPISVFLSVIFFTSKLENNSEITAILSSGISLNRLIVPYLISAIMIGTVSLLINY 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLF---FRLDDDLYIKISKYNPNNTLQGIFIV 176 P Q + L+ + E ++ + YI I ++ + F+ Sbjct: 121 YFLPMANKKKNQFHYQYLLSSRYKNKYEKNQTISTQISKNEYIFIRNFSRKKNIGKEFVY 180 Query: 177 DSRDTQTHKIYYAQSGSI-DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + + ++ +L+D +K Sbjct: 181 QKFNGKKLIYILKSKNIFGYKKKKIYVLSDYRETTIKKNYDFFIKGDYKIKKFSFTPEEL 240 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 A N+ L + + + + +E+++R + IF ++ Sbjct: 241 LPEEYIAETMNIYEL--KKFIDIEKKNRNVNIHLNEYYQRTSLPFSTFIFTILGFSL--- 295 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + + I + F +F+ I+ + ++L + I L Sbjct: 296 -SSKKSETGYNIILGIVLAVFYIFFMEITKIYSTKDTIPSYLSVWLPNVLLGIIALFFYW 354 Query: 356 KK 357 K Sbjct: 355 KN 356 >gi|261401002|ref|ZP_05987127.1| permease, YjgP/YjgQ family [Neisseria lactamica ATCC 23970] gi|269209119|gb|EEZ75574.1| permease, YjgP/YjgQ family [Neisseria lactamica ATCC 23970] Length = 371 Score = 87.0 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 44/365 (12%), Positives = 143/365 (39%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ +++ + + + + ++ + Q + + + +++ +L + G+ I + P Sbjct: 2 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWIIGMTP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ ++ + + + + Sbjct: 62 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWVM 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD---LYIKISKYNPNNTLQGIFIVDSR 179 P ++ + + S +E F L +Y + + ++ +F+ + Sbjct: 122 PWAELRSREYAEILKQKQELSLVEAGRFNTLGKRNGRVYFVETFDTESGIMKNLFLREQD 181 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANSS 236 I +A+ G S++ +++ + L DG + +P D + + F+ +L + Sbjct: 182 KNGNDNIIFAKEGNFSLNDNKRTLELRDGYRYSGTPGKADYNRVSFRHLSLIISTTPKLI 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + L+ +++E R++ + ++ ++A Sbjct: 242 DPVSHRRTIPTAQLI----------GSSNPQHQAELMWRISLTVSVLLLC---LLAVPLS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMI 354 + + I I++ + G + + + + +++ +L + + + +L+ Sbjct: 289 YFNPRGGHTYNILIAIGLFLIYQNGLTLLFEAVENGKIHFWLGLLPMHIIMFAVALILLR 348 Query: 355 KKKYT 359 + Sbjct: 349 VRSMP 353 >gi|260062764|ref|YP_003195844.1| hypothetical protein RB2501_14279 [Robiginitalea biformata HTCC2501] gi|88784332|gb|EAR15502.1| hypothetical protein RB2501_14279 [Robiginitalea biformata HTCC2501] Length = 559 Score = 87.0 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 49/295 (16%), Positives = 94/295 (31%), Gaps = 21/295 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + YIL+ +F S + ++FI I I+ ++ + I+ K YL+P + Sbjct: 1 MRILDQYILKRFLTNFFSSFVILMFIFIFQTIWLFIDDLAGKGLDIIIIGKFLFYLMPNL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 V P + + + N E + +G S + P++ LL F N Sbjct: 61 TEKVLPLTVLLSSILTFGAFAENYEFAAMKASGISLQRSMLPLIVFVSLLGFVTFYFANT 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P I L + + E +F + KY N+ ++ + Sbjct: 121 VIPISEQKIYNLRRNIATLKPAAVITEGVFSDFEGKNIKVDRKYGENDRFLENVVIHEKS 180 Query: 181 T--QTHKIYYAQSGSIDLDRQAII----LNDGEVHR--KSPISKDISIMKFKSYTLQTES 232 + + A +G + + I L DG + + F T Sbjct: 181 NLQRNTTVIKAATGELISGEGSDIIQLVLRDGHYYHEMTQASGSNQRTHPFAKADFDTYI 240 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRS------EFHKRLTQWLF 281 N + L + N R + + R+ E + R+ Sbjct: 241 MNIALPDN-------MEDLEADRNVETDRMKNVSRLRTDIDSIREHNFRVAAAFS 288 Score = 53.1 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 12/104 (11%), Positives = 37/104 (35%), Gaps = 6/104 (5%) Query: 255 PNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSI 314 + + H + L +I + A A++R+ P+ +++ + Sbjct: 428 REELELSYKRYNRHILSLHNKFALALSCIILFFVG---APLGAIIRKGGLGLPMVVAIVL 484 Query: 315 SFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMIKK 356 F ++ F + + P+L +L + + + + ++ Sbjct: 485 -FLAYYFFGVFSNNYAKEGNIPPVLGAWLPTMIMLPLGVWLTRR 527 >gi|258544322|ref|ZP_05704556.1| membrane protein [Cardiobacterium hominis ATCC 15826] gi|258520402|gb|EEV89261.1| membrane protein [Cardiobacterium hominis ATCC 15826] Length = 350 Score = 87.0 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 59/354 (16%), Positives = 127/354 (35%), Gaps = 7/354 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y+LR I + L++ F++ + +++QI + + +L ILL ++P Sbjct: 1 MTRFDRYLLRTILATSLIALAFLLAVDYIVQISVDADDLGQGNYTLAILLLQLLLVLPEK 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + TP + T L + E+ ++ G SR+ L + + A+++ + ++ Sbjct: 61 LLLYTPAAVLIGTIMGLGQLAAQNEIAVVRAAGISRLRLARAGIAFALIVGVLNIVNGET 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ + L +A L + E + + +I I NP+ +L I Sbjct: 121 LAPQLADRSRLLRNQA-LGQSSDPGREQGIWLKQQNTHIHIGALNPDGSLARIRSYY--- 176 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + I +++ L + R + +S+ + Sbjct: 177 SDADSITISEADRATWQAPDWQLENPRAWRTRADKTERLTAP-ESWQNGATPQALHALSA 235 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + + L L + + +RL L L+++ A Sbjct: 236 VKSAETLRELYTLTRF-MAANGLNHQQQSLKLWQRLLTPLTTAAMVLLALPFTFGNARSG 294 Query: 301 QRKKIHPIFISLSISFGVFWGFSY-IIHKIEQNPYYIPILYLFLFCISSIFLLM 353 Q+ I L +++ V G + + P L + +F + + LLM Sbjct: 295 QQGTRLVTGILLGVAYYVISGVIANLALLLHWPPLLGAALPILIFTLPPLILLM 348 >gi|94311740|ref|YP_584950.1| permease YjgP/YjgQ [Cupriavidus metallidurans CH34] gi|93355592|gb|ABF09681.1| predicted permease [Cupriavidus metallidurans CH34] Length = 372 Score = 87.0 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 39/360 (10%), Positives = 119/360 (33%), Gaps = 17/360 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ + R + + L ++ +++ + + ++ S N +L + G L Sbjct: 2 IFQQALRRELAYTAGAVFLVMLTFMLTSLVIRILGMAANGKASPNDVLMLIGLATIGYLS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT +++E+++ ++G S LIKPVL A + + Sbjct: 62 ILLSATLFISTLIVLTRWYKDSEMVVWFSSGVSLRDLIKPVLQFAAPFFVMALLLGLFAW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + + S + F + Y+ + + + + Sbjct: 122 PWANQQSALFRDRFEQRGVLSMIASGRFIEPANGNYVLFIEGIDADMKHARNVFVANAES 181 Query: 183 THKIYYAQSG----SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 ++ + +++ G + P + I++F Y ++ ++ Sbjct: 182 GKIGVALAHQGQFETMPNGDRLVVMEHGRRYAGIPGQLNYRIVEFDKYAVKVDNKPQDAA 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + + + + E R++ + F +I+I A + Sbjct: 242 ADLPT---------KSRDTIDLIRDPTRENLGELLWRISLPILAFNFVMIAIPLAY---V 289 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + + P+ ++ + + + + ++ + ++ ++ ++ +Y Sbjct: 290 NPRLGRYTPLVFAV-LIYLTYSNLINLAQAWVRSGAMSFWMAIWPIHLAVFLCALVMFRY 348 >gi|167835783|ref|ZP_02462666.1| hypothetical protein Bpse38_04778 [Burkholderia thailandensis MSMB43] Length = 383 Score = 87.0 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 45/381 (11%), Positives = 115/381 (30%), Gaps = 28/381 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRLYEKYFARQIYVTFIFVLFAFSGLFFFFDLISELNSVGHGNYKFGYAVLRVALQAPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ ++ + + + I ++ Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLVKIGVPIVIATYLIGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF---------FRLDDDLYIKISKYNPNNTLQ 171 I P +++ +A + + ++ ++ + K +P++T+ Sbjct: 121 IGPYSDQLSERVRLEALGSSVSTNFASGVWVKDTLTARDNGEPVTRFVNVGKLSPDSTIS 180 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT---- 227 + I + + +L D + + ++ + + + + Sbjct: 181 DVRIYEFDSRFNLQNVRIAKSGRYQPPGHWLLTDVTDTQLTSLAGNGATSPADTLSPVYR 240 Query: 228 ------------LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKR 275 S +++ +L L + + + Y ++ Sbjct: 241 AQQVTLPQYSLRSDLTPQILSVLLVSPERMSLFNLFR-YIQHLKENQQDTQRYDIALWRK 299 Query: 276 LTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY 335 L + ++S+ A I L +SF +F I + N + Sbjct: 300 LLYPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLFNTLFSHIGTL--NTWP 357 Query: 336 IPILYLFLFCISSIFLLMIKK 356 P+ CI L K Sbjct: 358 APLTAALPGCIYLALGLFALK 378 >gi|241761653|ref|ZP_04759740.1| permease YjgP/YjgQ family protein [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260754018|ref|YP_003226911.1| permease YjgP/YjgQ family protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283856464|ref|YP_163128.2| permease YjgP/YjgQ family protein [Zymomonas mobilis subsp. mobilis ZM4] gi|241373961|gb|EER63494.1| permease YjgP/YjgQ family protein [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258553381|gb|ACV76327.1| permease YjgP/YjgQ family protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283775468|gb|AAV90017.2| permease YjgP/YjgQ family protein [Zymomonas mobilis subsp. mobilis ZM4] Length = 403 Score = 87.0 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 42/365 (11%), Positives = 121/365 (33%), Gaps = 13/365 (3%) Query: 1 MKS---FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLI 57 M+ + Y++R I + + + + + ++L+ + V++ ++++ ++ ++ Sbjct: 1 MRIFNAIDRYLIRLITVPLVTTLIVSAMLMVLDKMLKLFDFVANQGGPVSVVWRMLANML 60 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 P + + P + + +EL + G S L++ A ++ Sbjct: 61 PEYMSLGIPIGLTLGILLAFRKLALQSELDVFRAVGISYSRLLRIPYIFAFFFALVNLAI 120 Query: 118 ENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD 177 IEP + L + + + ++ F +L + +++ + Sbjct: 121 VGYIEPYSHYAYEDLRYELRSGALGAAIKVGEFTKLGTHMTLRVEGSQDSGRNLSGIFGT 180 Query: 178 SRDTQTHKI--YYAQSGSIDLDRQAII----LNDGEVHRKSPISKDISIMKFKSYTLQTE 231 S + + + A +G + LN G + P ++ F+++ + + Sbjct: 181 SENPENGQKLTVTADNGRFMPSDDPNVILLRLNHGLLIHNRPDFTTPRVLTFENHDMPIK 240 Query: 232 SANSST---IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 + + L+ L + + +L ++ H RL + + ++ Sbjct: 241 LPAVESFRGRDGNQQEMTLTELFF-ILHQKHLPKKLRNQLQANLHFRLVEVATMFLLPML 299 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 ++ A + + L + I + NP + L LF + Sbjct: 300 ALTLAIPPKRSTSSLGVFLSILILVTDHKLNQYCQTIGGLGKINPVLMMWLPFILFSLLV 359 Query: 349 IFLLM 353 + Sbjct: 360 WRMYY 364 >gi|119899193|ref|YP_934406.1| hypothetical protein azo2903 [Azoarcus sp. BH72] gi|119671606|emb|CAL95519.1| conserved hypothetical membrane protein [Azoarcus sp. BH72] Length = 359 Score = 87.0 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 44/362 (12%), Positives = 120/362 (33%), Gaps = 18/362 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F +LR ++ + + I I +++ + + + +L + G+ T +P Sbjct: 2 IFRRALLREFSQTAAAVFVALFAILVTIVLIRLLGQAAGGGVPSDAVLALIGFGALTEMP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V + L+ R++E+++ +G I PVL A+ + + + Sbjct: 62 VVLTLTLFVAVLLTLSRSYRDSEMVVWFASGVPLTAWIGPVLRFALPVVAVIAGMTLFLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + + + + +F + + + + S + Sbjct: 122 PWAHMKNAEYRERLESRDDTQRVAPGVFRESAGSRRVFFVEVGAGEDGRVRNVFVSDENG 181 Query: 183 THKI-YYAQSGSIDLD---RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 A G + D + ++L G + P + + +M F+ Y++Q E+ ++ Sbjct: 182 DRLSVIAAAEGYLKTDEEGNRFVVLEKGRRYDGKPGTPEYRVMSFERYSVQIEAKQAAAQ 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 ++ + LL + E R+ L ++ ++A + Sbjct: 242 PQRSRARPTEELLR----------SPDDRNLGELAGRVGTPLAALLLA---LLAIPLSFV 288 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-PYYIPILYLFLFCISSIFLLMIKKK 357 + + + + +++ + + Q + + L + + LM K+ Sbjct: 289 NPRAGRTNNLLVAILTYLIYSNAITIGQAWVAQGRLRFELAVLLPHLVVLGLLALMFYKR 348 Query: 358 YT 359 Sbjct: 349 LA 350 >gi|330818019|ref|YP_004361724.1| Permease, putative [Burkholderia gladioli BSR3] gi|327370412|gb|AEA61768.1| Permease, putative [Burkholderia gladioli BSR3] Length = 363 Score = 87.0 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 58/367 (15%), Positives = 128/367 (34%), Gaps = 22/367 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 FE + R + + + ++ I +++ + +S S +L + G + L Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTIMLTSMMIRIVGYAASGQVSPKDVLVLIGLTVIGYLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M+ + VLT +++E+++ +G S LIKP+ A + + + + Sbjct: 62 MILVGTLFVSILFVLTRWYKDSEMVVWLASGVSLTRLIKPIGVFATPIILLIAFFAFVGW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P K + A+ Q S L F + + + + + Q Sbjct: 122 PWSNQQSKLIKARFQQRDEVSLLAPGQFRESPSTNRVFFIEKMSADQAAVQNVFVTTTEQ 181 Query: 183 THKIY----YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + + I+L +G + P + IM+F+ Y ++ +S T Sbjct: 182 GKVNVVVSQTGHTETAQNGDRFIVLENGRRYDGVPGQPNFKIMQFERYGVKIQSKQVVTQ 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + L L +P N +EF R+ L + +++I A Sbjct: 242 PTTTSTPTLDLLRDPTDENL-----------AEFAWRVGLPLIAINLMILAIPLAY---Q 287 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI----PILYLFLFCISSIFLLMI 354 +R + + +++ I + + +IE+ +L+L + I + M Sbjct: 288 NPRRGRTVNLVMAVLIYLTYSNLLNVMQSQIERGKIPFGVGLVVLHLVVAGIVAFLFWMR 347 Query: 355 KKKYTKI 361 + I Sbjct: 348 VRNRPLI 354 >gi|325132745|gb|EGC55428.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M6190] Length = 396 Score = 87.0 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 41/365 (11%), Positives = 141/365 (38%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ +++ + + + + ++ + Q + + + +++ +L + G+ + + P Sbjct: 27 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTP 86 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ ++ + + + + Sbjct: 87 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWVI 146 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFF---RLDDDLYIKISKYNPNNTLQGIFIVDSR 179 P ++ + + S +E F + + +Y + + ++ +F+ + Sbjct: 147 PWAELRSREYAEILKQKQELSLVEAGEFNSLGKRNGRVYFVETFDTESGIMKNLFLREQD 206 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANSS 236 I +A+ G S++ +++ + L G + +P D + + F+ L + Sbjct: 207 KNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTTPKLI 266 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + L+ +++E R++ + ++ ++A Sbjct: 267 DPVSHRRTIPTAQLI----------GSSNPQHQAELMWRISLTVSVLLLC---LLAVPLS 313 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMI 354 + + I I++ + G + + + + +++ +L + + +L+ Sbjct: 314 YFNPRSGHTYNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFVIAIVLLR 373 Query: 355 KKKYT 359 + Sbjct: 374 VRSMP 378 >gi|83313005|ref|YP_423269.1| permease [Magnetospirillum magneticum AMB-1] gi|82947846|dbj|BAE52710.1| Predicted permease [Magnetospirillum magneticum AMB-1] Length = 367 Score = 87.0 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 47/355 (13%), Positives = 100/355 (28%), Gaps = 7/355 (1%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTVL 61 YI R +F L I+ I + +++ I + + +L ++ + +P +L Sbjct: 6 IMSGYIGRQFASAFATVLLVILGIILLFDVIELIRRAAGRPELGITPILLMAFFKLPQML 65 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF + + + R EL++ G S I PVL +A + IF + N + Sbjct: 66 HTILPFAVMIGSMVCFWRLTRTHELVVARAAGISVWQFITPVLAVAGIFGIFEITTFNPM 125 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 ++L + ++ + L + + Q ++ RD Sbjct: 126 AAAMYGRYERLQDELLATKASAFDISEVGLWLREPHENGEMVVHSETVRQDGLVLHIRDA 185 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVH----RKSPISKDISIMKFKSYTLQTESANSST 237 + ++ L DG K + Q Sbjct: 186 HFFLYDRPDHFHQRISAESATLVDGAFEVRRAWVMEGGKPSVFKEQMHIPTQLTLDRIHD 245 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L +R L + L++ V + + Sbjct: 246 NFASPETLSFWQL-PGFIRFFERAGFTANKHRLYLQSLLASPVLYCGMVLMAAVFSLRPN 304 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 R + I ++ F V++ I + + + L Sbjct: 305 T-RSGGLLARIGAGVAAGFAVYFFSKVIYALGLSATLPQTLAAWTPPLFAGLIGL 358 >gi|281356604|ref|ZP_06243095.1| permease YjgP/YjgQ family protein [Victivallis vadensis ATCC BAA-548] gi|281316731|gb|EFB00754.1| permease YjgP/YjgQ family protein [Victivallis vadensis ATCC BAA-548] Length = 419 Score = 87.0 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 47/419 (11%), Positives = 114/419 (27%), Gaps = 62/419 (14%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YILR + + L V + + + + I+ + S +L+ GY +P Sbjct: 1 MPKLDGYILREFLIKYSVLLLVFVILFILSDVYRDISDFLEAKASYRSILQYLGYKLPGN 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + + + +N E+ + +G S + + ++++ Sbjct: 61 VRFILPISMLLGCMWTMATFGKNMEITAMRASGVSLFRCGGSIFVVGLIVTAVNIYFNEA 120 Query: 121 IEPKCRSTIKQL-------SAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI 173 + P +++ Q LT+ ++ + + + T Sbjct: 121 LVPYTERRAEEIRSEVADGRKYVQNLLTYRSTDQQRHWLFKTFTTDEAQQNVTVKTFWTD 180 Query: 174 FIVDS---------------------------------------RDTQTHKIYYAQSGSI 194 ++D ++A S Sbjct: 181 GMIDDIVLGAGDAEFDALIRQMFRLKADRILALSREERAKEIRKELKGRKVDFFANRVSY 240 Query: 195 DLDRQAIILNDGEVHRKSPISKD----------------ISIMKFKSYTLQTESANSSTI 238 D ++A +DG + + F + + Sbjct: 241 DAGKKAWTFSDGNFTSYDRNDETKFEASRGTSTMHDPQPYKSIVFNEKEIPEAPDDIMNS 300 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + + +D + + N N + Y + F+ RL + + I A K Sbjct: 301 IKEKDDLPTLVIWDLVRRNDNMPDRVYSIYMTVFYYRLAFPWACFLAVFLGIPLATKNER 360 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I + + V F + NP + + F + ++ + Sbjct: 361 TGSLMAIITAVGIIIVYIVVAQVFLVLGKGGILNPVFAGLAPTLAFIGCGAYRILHDRN 419 >gi|288958014|ref|YP_003448355.1| hypothetical protein AZL_011730 [Azospirillum sp. B510] gi|288910322|dbj|BAI71811.1| hypothetical protein AZL_011730 [Azospirillum sp. B510] Length = 364 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 43/355 (12%), Positives = 108/355 (30%), Gaps = 13/355 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTE-SLNILLKISGYLIPTVL 61 + YI R F + + ++ I ++ ++ + + + ++++++ +P + Sbjct: 6 TLSRYIGRQFIFWFCLLMVILLAIVLLLDTVELLRRAGTKPHVTFGLVVEMALLKLPEIG 65 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILL-----SIFLFI 116 + PF + R+ EL++ G S + PV+F A + ++ + Sbjct: 66 QQIFPFVILFAGMFTFWRLTRSAELVVARAVGVSAWQFLMPVMFAAAAIGVVKVTLVNPV 125 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 I + + L ++ + +I NP +V Sbjct: 126 GAVFIAKYDQLQDRYLKLQSSSLNISRSGLWLRQTNETEQFFIHAELVNPATFELSNVVV 185 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 D + + + S L + L D + KD + + + + A Sbjct: 186 FLFDADQNYLARVDAPSAVLRERKWELQDA---ILNRAKKDPEKLDSYTIPTELDMATIE 242 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + +R + L Q + L + + Sbjct: 243 ESFAPPETISFWELPR-FIHTLETTGFPAVRHRLHYQSLLAQPFLFLAMVLFAAAFSL-- 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 L R+ + + + F +F ++ + I+ + S+ L Sbjct: 300 RLPRRGGTMAMVTGGVLTGFVLFVMTD-VVRTFGMSETIPIIMAAWSPAGISLLL 353 >gi|149186432|ref|ZP_01864745.1| predicted permease [Erythrobacter sp. SD-21] gi|148830021|gb|EDL48459.1| predicted permease [Erythrobacter sp. SD-21] Length = 365 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 44/356 (12%), Positives = 111/356 (31%), Gaps = 6/356 (1%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + Y+ + L + +V + ++ +L + + LLK + +P ++ Sbjct: 10 TLTRYLAKLFVVRILAVLVMLVLVLMMLDLLSNSGKILAVEGNGQGELLKYASLRVPQLI 69 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P+ + T L ++N+N+E++ + G S ++ P+L A+++ F+ + Sbjct: 70 QRFLPYSVLLATLISLVTLNQNSEVIAMKAAGLSAHQVLAPLLLTALVVGGVSFVFNERV 129 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT--LQGIFIVDSR 179 + +T+K A + + D + ++ + R Sbjct: 130 VTRATATLKAWDAADWGPVPEESSVRANVYLADGSNVLTAAQLTGSGDAIRMRDVTWYRR 189 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + + L + + R + S Sbjct: 190 SPEGTIVEQVDAARATYAGPGWRLEN--IERFEVAAAASSTGDSLVVGEGLTPDQIDLAK 247 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + + L + R+++ +L+ L + L+ VAA A Sbjct: 248 IDPDAVPFWEL-GERIDAFEDAGRRTGEMRAKWWHKLSGPLSSFLMPLLGAVAAFGLARS 306 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 Q I ++L ++ V + + P + F ++I+ Sbjct: 307 GQLFVRALIGMALGFAYFVVDNAALAMGNFGGYPPLLAAWAPFFLFALIGETVLIR 362 >gi|212710411|ref|ZP_03318539.1| hypothetical protein PROVALCAL_01472 [Providencia alcalifaciens DSM 30120] gi|212686831|gb|EEB46359.1| hypothetical protein PROVALCAL_01472 [Providencia alcalifaciens DSM 30120] Length = 365 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 51/357 (14%), Positives = 127/357 (35%), Gaps = 19/357 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + + + + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFVLLLIFFSQKSIDILGAAVQGNIPSNLVLPLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + + +E+ ++ G + L+K L LA L ++ + + Sbjct: 62 LILPLSLFLGLLMTYSKLYTESEITVMHACGLGKSVLVKAALVLAALTALVAVANITWML 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +Q+ A A+ + + E F D ++ N + +F+ R Sbjct: 122 PWSSQYQEQVLADAKANPGLAAMVEGQFKTTKDGNFVLYIGEVKGNDFKNVFLAQLRTAN 181 Query: 183 --THKIYYAQSGSIDLDRQ---AIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + D ++L+ G + + + +D I F +Y + + Sbjct: 182 EQRPSVVVADSGYMKEDEYGRQMVVLDQGTRYEGTAMLRDFRITDFVNYQAVVDHKATDV 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 K + + L N + +EFH RLT V+ L+ Sbjct: 242 STDKVEQKTMMQLWNED----------NPEVNAEFHWRLTIVFSVVVMALM---VVPLSE 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI-PILYLFLFCISSIFLLM 353 + ++ ++ + ++ + F S + + ++ ++ + +++ Sbjct: 289 VNPRQGRVLSMIPAMLLYLIFFLLQSTLRNSADKGDIDPKYAMWAVNLGYLLLAVIL 345 >gi|309378516|emb|CBX22869.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 371 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 45/365 (12%), Positives = 144/365 (39%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ +++ + + + + ++ + Q + + + +++ +L + G+ I + P Sbjct: 2 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWIIGMTP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ ++ + + + + Sbjct: 62 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWVM 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD---LYIKISKYNPNNTLQGIFIVDSR 179 P ++ + + S +E F L +Y + + ++ +F+ + Sbjct: 122 PWAELRSREYAEILKQKQELSLVEAGRFNTLGKRNGRVYFVETFDTESGIMKNLFLREQD 181 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANSS 236 I +A+ G S++ +++A+ L DG + +P D + + F+ +L + Sbjct: 182 KNGNDNIIFAKEGNFSLNNNKRALELRDGYRYSGTPGKADYNRVSFRHLSLIISTTPKLI 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + L+ +++E R++ + ++ ++A Sbjct: 242 DPVSHRRTIPTAQLI----------GSSNPQHQAELMWRISLTVSVLLLC---LLAVPLS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMI 354 + + I I++ + G + + + + +++ +L + + + +L+ Sbjct: 289 YFNPRGGHTYNILIAIGLFLIYQNGLTLLFEAVENGKIHFWLGLLPMHIIMFAVALILLR 348 Query: 355 KKKYT 359 + Sbjct: 349 VRSMP 353 >gi|308451108|ref|XP_003088547.1| hypothetical protein CRE_17759 [Caenorhabditis remanei] gi|308246904|gb|EFO90856.1| hypothetical protein CRE_17759 [Caenorhabditis remanei] Length = 341 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 51/338 (15%), Positives = 113/338 (33%), Gaps = 19/338 (5%) Query: 27 AWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTEL 86 Q+++R + +ILL I G+ +P L ++ P F + V + + E+ Sbjct: 1 MMGGQLIKRFGQAAMGRVDPSILLSIIGFRLPEFLTLILPLGFFIGLMLVFGRLYVDHEM 60 Query: 87 LIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLE 146 +++ +G SRI + + ++ L ++ + + P +QL + + F + Sbjct: 61 AVLNGSGISRIQVARLLIPLTVIYLCVQSVLMIWMSPWGIRQYEQLISTQAVRTGFDLVR 120 Query: 147 ENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAII---- 202 F S L+ IF + + + A Sbjct: 121 PREFISSGAYTIYAGSLSEDRKNLKDIFFYQRAEKEGKPDVMILAKEATRIEIANETASV 180 Query: 203 --LNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAND-QNLSFLLNPNPNNPN 259 L +G + P + S +F+SY L+ E+ + + + LL Sbjct: 181 VDLVEGRRYEIYPGTPKYSQTEFQSYRLRLENNKEAKFESDEVEGLSFGKLLE------- 233 Query: 260 YRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVF 319 SE RL ++ +++ + ++ + +F +L I + Sbjct: 234 --NRNDPVVASELGWRLFVPFSIIVALMLATALC---EVSPRQGRYLKLFPALLIFASLI 288 Query: 320 WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I +I ++ + L + L +K+ Sbjct: 289 VALMAIRTRISKDEVGVWAYPAVLLFYAVAAALFSRKQ 326 >gi|71901306|ref|ZP_00683403.1| permease YjgP/YjgQ [Xylella fastidiosa Ann-1] gi|71728926|gb|EAO31060.1| permease YjgP/YjgQ [Xylella fastidiosa Ann-1] Length = 385 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 42/368 (11%), Positives = 115/368 (31%), Gaps = 13/368 (3%) Query: 1 MKSF----ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYL 56 MK F + Y+ R + + L++ L ++ + V + + + S + Y Sbjct: 18 MKLFPCLHDRYVARAVVATVLLTWLVLLGLDVVNGFASEVRDIGKGSYSFGHAIAYIAYT 77 Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 +P + P + L + +EL + G SR V+ + + + + + Sbjct: 78 VPRRAYTLFPTAAVIGMLLGLGQLAATSELTALRALGVSRTRSSLSVMMMIGMGTGLMVL 137 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI- 175 + + P ++ L A A+ + + F+ + ++++ G + Sbjct: 138 TGETLGPWAQAQADILKASAKYKSDMTGARYSGFWAREGEVFLNARSGEEKRLDSGGIML 197 Query: 176 ------VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ 229 + ++ ++ + IL + S + + Sbjct: 198 ILHDVRLYQLAADGRLQSMTRAARVEHHQDVWILQQVQRDTFSERGVQRETFHSLPWRSR 257 Query: 230 TESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 + A + + K + + L+ + + ++ R + + L + Sbjct: 258 LDPAALAAGLAKPRNLSAHELVQ-SIEYRRRNHLDARDFEGQYWSRWFYPINVLALCLAA 316 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 I + K + I ++SF + F I + + Y L + Sbjct: 317 IPFSFGLLRSGGMGKRTFLGILFALSFWMLQMFFERIASVLK-LNYQIFYLLPPMVMLCG 375 Query: 350 FLLMIKKK 357 + +++ Sbjct: 376 SYWLFRRQ 383 >gi|325136763|gb|EGC59363.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M0579] gi|325208502|gb|ADZ03954.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis NZ-05/33] Length = 396 Score = 86.6 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 41/365 (11%), Positives = 141/365 (38%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ +++ + + + + ++ + Q + + + +++ +L + G+ + + P Sbjct: 27 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTP 86 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ ++ + + + + Sbjct: 87 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWVI 146 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFF---RLDDDLYIKISKYNPNNTLQGIFIVDSR 179 P ++ + + S +E F + + +Y + + ++ +F+ + Sbjct: 147 PWAELRSREYAEILKQKQELSLVEAGGFNSLGKRNGRVYFVETFDTESGIMKNLFLREQD 206 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANSS 236 I +A+ G S++ +++ + L G + +P D + + F+ L + Sbjct: 207 KNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTTPKLI 266 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + L+ +++E R++ + ++ ++A Sbjct: 267 DPVSHRRTIPTAQLI----------GSSNPQHQAELMWRISLTVSVLLLC---LLAVPLS 313 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMI 354 + + I I++ + G + + + + +++ +L + + +L+ Sbjct: 314 YFNPRSGHTYNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFVIAIVLLR 373 Query: 355 KKKYT 359 + Sbjct: 374 VRSMP 378 >gi|161870424|ref|YP_001599597.1| hypothetical protein NMCC_1472 [Neisseria meningitidis 053442] gi|161595977|gb|ABX73637.1| conserved hypothetical protein [Neisseria meningitidis 053442] Length = 432 Score = 86.6 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 41/365 (11%), Positives = 141/365 (38%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ +++ + + + + ++ + Q + + + +++ +L + G+ + + P Sbjct: 63 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTP 122 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ ++ + + + + Sbjct: 123 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWVI 182 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFF---RLDDDLYIKISKYNPNNTLQGIFIVDSR 179 P ++ + + S +E F + + +Y + + ++ +F+ + Sbjct: 183 PWAELRSREYAEILKQKQELSLVEAGGFNSLGKRNGRVYFVETFDTESGIMKNLFLREQD 242 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANSS 236 I +A+ G S++ +++ + L G + +P D + + F+ L + Sbjct: 243 KNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTTPKLI 302 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + L+ +++E R++ + ++ ++A Sbjct: 303 DPVSHRRTIPTAQLI----------GSSNPQHQAELMWRISLTVSVLLLC---LLAVPLS 349 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMI 354 + + I I++ + G + + + + +++ +L + + +L+ Sbjct: 350 YFNPRSGHTYNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFVIAIVLLR 409 Query: 355 KKKYT 359 + Sbjct: 410 VRSMP 414 >gi|315223351|ref|ZP_07865210.1| YjgP/YjgQ family permease [Capnocytophaga ochracea F0287] gi|314946682|gb|EFS98671.1| YjgP/YjgQ family permease [Capnocytophaga ochracea F0287] Length = 495 Score = 86.6 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 53/304 (17%), Positives = 109/304 (35%), Gaps = 22/304 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI+ +FL + +V I I I+ ++ L I+ K Y IP + Sbjct: 1 MKILDRYIITQFLTNFLGALSILVLIFVFHTIFTYIDELAGRGLELWIIFKFLIYFIPQL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P++ P + + + N E + +G S + +++P++ L LLS+ F N Sbjct: 61 IPIIMPLAVVIASIMTFGAFAENYEFAAMKASGISLMRVMRPLIILMALLSLGTFFLANN 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + L + + E +F + +D+ IK+ K +N ++ + Sbjct: 121 VIPVAYREVYTLRSNIAKVKPAMAIAEGVFSNIGEDISIKVGKKRGDNDEFLENVLIHKK 180 Query: 181 TQTHKIYYAQSG--------SIDLDRQAIILNDGEVHRKSPISKD-------ISIMKFKS 225 T + + + +IL DG + + + + FK Sbjct: 181 TPDKVNRTVINAKRGELKSSKTNSNFLQLILEDGTYYEDIKTNSYEAQQKEPFAKVYFKK 240 Query: 226 YTLQTE-------SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQ 278 Y + + + N T N+ L + + + Y + +R Sbjct: 241 YIINLDLSHLNNVNFNEKTDATTYRMMNVGQLNYAIDSLRTDFKQNITDYGNNMFRRTGF 300 Query: 279 WLFP 282 + P Sbjct: 301 SVAP 304 Score = 41.9 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 12/95 (12%), Positives = 38/95 (40%), Gaps = 4/95 (4%) Query: 255 PNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSI 314 ++ YR +L+ + + + + ++ A A +R+ P+ I++ + Sbjct: 361 QSDLEYRYKLMNLHILNLSDKFALTVACFVLFFVA---APLGAFIRKGGIGMPLVIAMIL 417 Query: 315 SFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 ++ ++ + I +N P L ++ + + Sbjct: 418 FLAYYFIGMFMKN-IAENNTINPALAPWIPALILL 451 >gi|295689677|ref|YP_003593370.1| permease YjgP/YjgQ family protein [Caulobacter segnis ATCC 21756] gi|295431580|gb|ADG10752.1| permease YjgP/YjgQ family protein [Caulobacter segnis ATCC 21756] Length = 367 Score = 86.6 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 42/359 (11%), Positives = 100/359 (27%), Gaps = 7/359 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPT 59 M E Y+L+ + + + + + +I + V + + LL ++ P Sbjct: 4 MGMLERYVLKRSMSALVGALAVLGAMVMLIAFVDIARNVGTRADVNFFQLLYLTVLQAPA 63 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + ++ PF F T +NR +EL+ + G S I P + ++ + N Sbjct: 64 TILVLAPFVFLFGTMWAFVELNRRSELIAMRAAGVSAWRFIMPAATASFVIGLLTITLLN 123 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI-----F 174 + + + + + DD I I + + Sbjct: 124 PLTTAMTARFETERDHMMNGYLNNAPRGTWLRQGDDKTQIVIRARGRDMIDGSVRLRGVS 183 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + + + + + + R R++ S + Sbjct: 184 LFVYTLNKKGVMDFTRRIEANEARLEPGFWRLTGVREATPGAGAIRSDSLSIPSNLDDRT 243 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 +S L L ++ + L L +++ + Sbjct: 244 ASERFNTPQAVALWRL-PATIKRAEDAGFSAAPFKLRLQQDLATPLLFSAMSVLAAAFSL 302 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + + + ++L F F + K + I + I + F L+ Sbjct: 303 RLMRLGGLAALAGSGVALGFGFFFFNELCSTLGKADVLAPSIAAWTPPIVAILAGFTLL 361 >gi|16125935|ref|NP_420499.1| hypothetical protein CC_1690 [Caulobacter crescentus CB15] gi|221234698|ref|YP_002517134.1| hypothetical protein CCNA_01761 [Caulobacter crescentus NA1000] gi|13423101|gb|AAK23667.1| conserved hypothetical protein [Caulobacter crescentus CB15] gi|220963870|gb|ACL95226.1| hypothetical membrane spanning protein [Caulobacter crescentus NA1000] Length = 368 Score = 86.6 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 41/361 (11%), Positives = 94/361 (26%), Gaps = 11/361 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPT 59 M E Y+L+ + + + + + +I + V + S LL ++ P Sbjct: 5 MGMLERYVLKRTMGALVGALAVLSAMVMLIAFVDIARNVGTRADASFLRLLYLTILQAPA 64 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + ++ PF F T +NR +EL+ + G S I P + ++ + N Sbjct: 65 TILVLAPFIFLFGTMWAFVELNRRSELIAMRAAGISAWRFIMPAAASSFVIGLLTITLLN 124 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI------ 173 + + + + + + DD I I + Sbjct: 125 PLTTAMTAKFETERDRTMNGYLKEAPKGTWLRQGDDKTQIVIRARARELVDGSVRLRGVS 184 Query: 174 -FIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 F+ + G S S + Sbjct: 185 LFVYTLNAKGVMDFTRRIEANEARLEPGFWRLSGVREATPGAGAIRSDS--LSIPSNLDD 242 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 +S L L ++ + L L +++ Sbjct: 243 RTASERFNTPQAVALWRL-PATIQRTADAGFSAVPFKLRLQQDLATPLLFAAMSVLAAAF 301 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 + + + + ++L F F + + + ++ + F L Sbjct: 302 SLRLMRLGGLAMLAGSGVALGFGFFFFNELCSTLGRADVLAPFVAAWTPPTVALLVGFTL 361 Query: 353 M 353 + Sbjct: 362 L 362 >gi|307824319|ref|ZP_07654545.1| permease YjgP/YjgQ family protein [Methylobacter tundripaludum SV96] gi|307734699|gb|EFO05550.1| permease YjgP/YjgQ family protein [Methylobacter tundripaludum SV96] Length = 357 Score = 86.6 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 49/357 (13%), Positives = 114/357 (31%), Gaps = 3/357 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R I + L++ L ++ + + ++ + L + P+V Sbjct: 1 MNVLTGYIVREILKGSLVATLLLLTLFNLFTFSDQLKDLGKGHYGLTEIFYYLALTSPSV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + +L +M N EL+ + G S + +I+ V+ ++L + + Sbjct: 61 FYELMPASALLGSLFILGAMGNNRELIAMRAAGLSILGIIRAVMLAGLILVVVSILVGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A + + + +I + K + L I I + D Sbjct: 121 VAPVAERAAQMIKVNAVDEGRVVMNVKYGLWLREGKKFINVRKMQDDGNLADISIYELDD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + ++ Q L + S S + + +V+ Sbjct: 181 QRRLRYSIHAEKAVFQGNQQWKLEGIKQSGISIDQMTASNQNEQIWQSTVAPDLLDIVVV 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 A+D ++ L + + + F R+ L ++ L+S + R Sbjct: 241 NAHDLSMYDL-AMYVDFLKDNHQKSHEFELAFWGRVVNPLVVLVMLLVSAPFVI--GVKR 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + I + I G + H P++ + L + Sbjct: 298 GINVGGRMMIGVVIGMGFNIIDKIVGHLGLIYDLNPPLMAVTPSLTVLALALFALSR 354 >gi|87306756|ref|ZP_01088903.1| hypothetical protein DSM3645_10492 [Blastopirellula marina DSM 3645] gi|87290935|gb|EAQ82822.1| hypothetical protein DSM3645_10492 [Blastopirellula marina DSM 3645] Length = 380 Score = 86.2 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 51/363 (14%), Positives = 113/363 (31%), Gaps = 33/363 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M++ + Y++ + + F + L V + V + +I+L + Y +P + Sbjct: 1 MRTIQTYVVWEVFKIFFLCLLATVLLMVVGGGVNE---GLKKGLPPSIILGMMPYFVPEM 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P C V M+ + E++ + + G + I +I PVL LS F ++ Sbjct: 58 LRFTIPGCLLFSICTVFGRMSASNEIVALKSAGINPIEIIWPVLVATYALSFVTFGLYDV 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 R + ++ ++ L T + +++ + ++ V + + Sbjct: 118 CAGWSRPNMHRIIIQS-LDDTAYSMLRTQKSFSMQGFSVRVKGVDDRRLIEPFITVQTPN 176 Query: 181 TQTHKIYYAQSGSIDLDRQAIILN---DGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 A+ ++ + + L + + F Q + + Sbjct: 177 GGPEFTLTAEEAELESNPETGALQVVCRNSFMEYGDGTNFSQVEPFVHQITQLGTLDQDL 236 Query: 238 IVLKANDQNLS----------FLLNPNPNNPNYRP-------------ELLETYRSEFHK 274 L LL N + + L ++E + Sbjct: 237 NSASPAALTLRHIPAQIAREAKLLEDTINALHIGGDPEAIAYAAEGHQKRLWRLQAERQR 296 Query: 275 RLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY 334 RL+ L F + I A R R + F+ GV++ + ++ Sbjct: 297 RLSNGLGCFCFACVGIPVAMWR---RTSDNVTTFFLCFLPILGVYYPLLVTGETMARDGV 353 Query: 335 YIP 337 P Sbjct: 354 LAP 356 >gi|301628860|ref|XP_002943564.1| PREDICTED: lipopolysaccharide export system permease protein lptG-like [Xenopus (Silurana) tropicalis] Length = 350 Score = 86.2 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 43/353 (12%), Positives = 103/353 (29%), Gaps = 30/353 (8%) Query: 32 ILQRINLVSS--STESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLII 89 ++ + VS L+ L +P L + P + T V+ + +++E I+ Sbjct: 1 MIDELRWVSRAPGGYQLSHALLTVVLRLPNYLYELLPISVLIGTIYVMARLAQSSEFTIM 60 Query: 90 DNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS--TIKQLSAKAQLALTFSYLEE 147 +G ++ +L L F + + P + ++ QL + Sbjct: 61 RTSGMGPGRALRMLLVLGCAFVALTFAMGDYVAPMANRAGQMLKVRYLGQLTTGATGGWL 120 Query: 148 NLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQS-------------GSI 194 L + + P+ + GI I D D + Sbjct: 121 KERKDDGHSLAVNVRALGPDGQMIGIRIFDFDDQGRLSAQLQAASAQVAQTAQTAQTAED 180 Query: 195 DLDRQAIILNDGEVHRKSPISKDISIMKF-----KSYTLQTESANSSTIVLKANDQNLSF 249 D +L + R D + ++ + + S +LK Sbjct: 181 AADAPGWVLTQAQQRRFVLRGADQAHVEQTDSASMRWPTGITAEMVSAALLKPERMPTIE 240 Query: 250 LLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIF 309 L ++ + + Y EF +++ L ++ ++++ A R +F Sbjct: 241 LFQ-YISHLEANGQSAQKYEIEFWRKVFYPLSCLVMVVLALPFAYL--HFRSGGLAAYVF 297 Query: 310 ISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCI-----SSIFLLMIKKK 357 + F + + + + I + F ++ ++ Sbjct: 298 GGVMAGISFFLLNTVSGYAGTLQNWSPWLTAAAPGLIYSAASLAAFGWLVLRR 350 >gi|296315184|ref|ZP_06865125.1| permease, YjgP/YjgQ family [Neisseria polysaccharea ATCC 43768] gi|296837908|gb|EFH21846.1| permease, YjgP/YjgQ family [Neisseria polysaccharea ATCC 43768] Length = 371 Score = 86.2 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 43/365 (11%), Positives = 144/365 (39%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ +++ + + + + ++ + Q + + + +++ +L + G+ + + P Sbjct: 2 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ ++ + + + + Sbjct: 62 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWVI 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFF---RLDDDLYIKISKYNPNNTLQGIFIVDSR 179 P ++ + + S +E F + + +Y + + ++ +F+ + Sbjct: 122 PWAELRSREYAEILKQKQELSLVEAGEFNSLGKRNGRVYFVETFNTESGIMKNLFLREQD 181 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANSS 236 I +A+ G S++ +++ + L+DG + +P D + + F+ +L + Sbjct: 182 KNGNDNIIFAKEGNFSLNDNKRTLDLHDGYRYSGTPGKADYNRVSFQHLSLIISTTPKLI 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + L+ +R+E R++ + ++ ++A Sbjct: 242 DPVSHRRTIPTAQLI----------GSSNPQHRAELMWRISLTVSVLLLC---LLAVPLS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMI 354 + + I I++ + G + + + + +++ +L + + +L+ Sbjct: 289 YFNPRSGHTYNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFVIAIVLLR 348 Query: 355 KKKYT 359 + Sbjct: 349 VRSMP 353 >gi|71275897|ref|ZP_00652180.1| permease YjgP/YjgQ [Xylella fastidiosa Dixon] gi|170729352|ref|YP_001774785.1| hypothetical protein Xfasm12_0116 [Xylella fastidiosa M12] gi|71163274|gb|EAO12993.1| permease YjgP/YjgQ [Xylella fastidiosa Dixon] gi|167964145|gb|ACA11155.1| conserved hypothetical protein [Xylella fastidiosa M12] Length = 368 Score = 86.2 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 43/368 (11%), Positives = 117/368 (31%), Gaps = 13/368 (3%) Query: 1 MKSF----ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYL 56 MK F + Y+ R + + L++ L ++ + V + + + S + Y Sbjct: 1 MKLFPCLHDRYVARAVVATVLLTWLVLLGLDVVNGFASEVRDIGKGSYSFGHAIAYIAYT 60 Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 +P + P + L + +EL + G SR L V+ + + + + + Sbjct: 61 VPRRAYTLFPTAAVIGMLLGLGQLAATSELTALRALGVSRKRLSLSVMMVIGMGTGLMAL 120 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI- 175 + + P ++ L A A+ + + F+ + ++++ G + Sbjct: 121 TGETLGPWAQAQADILKASAKYKSDMTGARYSGFWAREGEVFLNARSGEEKRLDSGGIML 180 Query: 176 ------VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ 229 + ++ ++ + IL + S + + Sbjct: 181 ILHDVRLYQLAADGRLQSMTRAARVEHHQDVWILQQVQRDTFSERGVQRETFHSLPWRSR 240 Query: 230 TESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 + A + + K + ++ L+ + + ++ R + + L + Sbjct: 241 LDPAALAAGLAKPRNLSVHELVQ-SIEYRRRNHLDARDFEGQYWSRWFYPINVLALCLAA 299 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 I + K + I ++SF + F I + + Y L + Sbjct: 300 IPFSFGLLRSGGMGKRTFLGILFALSFWMLQMFFERIASVLK-LNYQIFYLLPPMVMLCG 358 Query: 350 FLLMIKKK 357 + +++ Sbjct: 359 SYWLFRRQ 366 >gi|15836745|ref|NP_297433.1| hypothetical protein XF0140 [Xylella fastidiosa 9a5c] gi|9104926|gb|AAF82953.1|AE003867_7 conserved hypothetical protein [Xylella fastidiosa 9a5c] Length = 368 Score = 86.2 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 43/368 (11%), Positives = 116/368 (31%), Gaps = 13/368 (3%) Query: 1 MKSF----ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYL 56 MK F + Y+ R + + L++ L ++ + V + + + S + Y Sbjct: 1 MKLFPCLHDRYVARAVVATVLLTWLVLLGLDVVNAFASEVRDIGKGSYSFGHAIAYIAYT 60 Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 +P + P + L + +EL + G SR L V+ + + + + + Sbjct: 61 VPRRAYTLFPTAAVIGMLLGLGQLAATSELTALRALGVSRKRLSLSVMMMIGMGTGLMAL 120 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI- 175 + + P ++ L A A+ + + F+ + ++++ G + Sbjct: 121 TGETLGPWAQAQADILKASAKYQSDMTGARYSGFWAREGEVFLNARSGEEKRLDSGGIML 180 Query: 176 ------VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ 229 + ++ ++ + IL + S + + Sbjct: 181 ILHDVRLYQLAADGRLQSMTRAARVEHHQDVWILQQVQRDTFSERGVQRETFHSLPWRSR 240 Query: 230 TESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 + A + + K + + L+ + + ++ R + + L + Sbjct: 241 LDPAALAAGLAKPRNLSAHELVQ-SIEYRRRNHLDARDFEGQYWSRWFYPVNVLALCLAA 299 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 I + K + I ++SF + F I + + Y L + Sbjct: 300 IPFSFGLLRSGGMGKRTFLGILFALSFWMLQMFFERIASVLK-LNYQIFYLLPPMVMLGG 358 Query: 350 FLLMIKKK 357 + +++ Sbjct: 359 SYWLFRRQ 366 >gi|317051997|ref|YP_004113113.1| permease YjgP/YjgQ family protein [Desulfurispirillum indicum S5] gi|316947081|gb|ADU66557.1| permease YjgP/YjgQ family protein [Desulfurispirillum indicum S5] Length = 356 Score = 86.2 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 55/361 (15%), Positives = 122/361 (33%), Gaps = 11/361 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M LY R ++ +V + V+ I+ ++ + S + G + Sbjct: 1 MTLL-LYTFRQYLHIIFLAMAVLVALYGVVDIIGNLDDFA--HLSSLQIAYYVGATLLIG 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L +TP + T +T++ N E+ I+ + G S + PVL + F+ Sbjct: 58 LYHLTPAIMLIATVMYITTIGVNNEMKIMLSAGISLKKISLPVLVFVSCAAGAHFLLGEQ 117 Query: 121 IEPKCRSTIKQ-LSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + + + +A+ S + + + D N + V+ Sbjct: 118 VFQHIKPEVDALQKYEARQQRPPSAIIAGNLWVRNYDGTSFARIRRFNMENNLLLGVEIY 177 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + I S ++ I +G V R + +++ +S + ++ + Sbjct: 178 TVREGMIQEYVSADHGSLQEGRIHLEGVVIR-NFMTQQVSRLPEHQVEFTGIMESTKASI 236 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + + L + + Y SE +R++ L ++ L++I Sbjct: 237 KPLEEYSSRELAS-DIAILREAGHPSHLYVSELLRRVSYSLAIIVLSLVAIPLGVTGE-- 293 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKI---EQNPYYIPILYLFLFCISSIFLLMIKK 356 R+ KI + + L ++ F S + +PY P + +F +FL + Sbjct: 294 RKSGKIFSVTVGLLVAMVYFIVDSLAMTLGKGDAISPYIAPFIANGVFLGLFVFLYSRHR 353 Query: 357 K 357 Sbjct: 354 N 354 >gi|226951739|ref|ZP_03822203.1| permease YjgP/YjgQ-like protein [Acinetobacter sp. ATCC 27244] gi|226837529|gb|EEH69912.1| permease YjgP/YjgQ-like protein [Acinetobacter sp. ATCC 27244] Length = 340 Score = 86.2 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 48/338 (14%), Positives = 108/338 (31%), Gaps = 16/338 (4%) Query: 28 WVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELL 87 Q+++ + +LL I Y +P L ++ P F + V + + E+ Sbjct: 1 MGGQLIKIFGRAAQGRLDGGVLLSIIAYRLPEFLTLILPLGFFIGLMLVFGRLYVDHEMA 60 Query: 88 IIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEE 147 +++ +G SR L + +L + + I + + L + F + Sbjct: 61 VLNGSGVSRNQLTRLLLPMTAVFLIVQAVLMCWGASAGIRGYQSLMQTQAVRAGFDLVRP 120 Query: 148 NLFFRLDDDLYIKISKYNPNNTLQGIFIVD--SRDTQTHKIYYAQSG---SIDLDRQAII 202 F S L+ IF R+ + ++ A+ I+ D +++ Sbjct: 121 KEFISSGSYTIYAGSLSEDRKNLKDIFYYYKSDREDKPDQMILAKEATRVEIENDTASVV 180 Query: 203 -LNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYR 261 L G + P + +F+SY L+ E+ + + L ++ R Sbjct: 181 DLVQGRRYEIYPNQPRYTQAEFQSYRLRLENDKDVNFESEDVEALSMSKLWQKRDDFVVR 240 Query: 262 PELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWG 321 E R+ V+ +++ ++ RQ + I + + Sbjct: 241 G--------ELGWRIFGPFVMVVALFLAVALSEVSP--RQGRYYRLIPAIFIFASLIVLM 290 Query: 322 FSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYT 359 + ++ + L + L K+K Sbjct: 291 IAIKTRISKEELDIWAYPAVLLIYGIAAALFTRKQKLA 328 >gi|241760314|ref|ZP_04758409.1| permease, YjgP/YjgQ family [Neisseria flavescens SK114] gi|319637672|ref|ZP_07992438.1| hypothetical protein HMPREF0604_00061 [Neisseria mucosa C102] gi|241319192|gb|EER55670.1| permease, YjgP/YjgQ family [Neisseria flavescens SK114] gi|317400827|gb|EFV81482.1| hypothetical protein HMPREF0604_00061 [Neisseria mucosa C102] Length = 371 Score = 86.2 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 44/365 (12%), Positives = 142/365 (38%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ ++ + + + + ++ + Q + + + +++ +L + G+ + + P Sbjct: 2 IYQRNFIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ +I + + + + Sbjct: 62 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAILIAVMQLWVM 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD---LYIKISKYNPNNTLQGIFIVDSR 179 P ++ + + S +E F L +Y + + ++ +F+ + Sbjct: 122 PWAELRSREYAEILKQKQELSLVEAGEFNNLGKRNGRVYFVETFDTESGIMKNLFLREQD 181 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANSS 236 I +A+ G S+ +++ + L DG + +P D + + F+ +L + Sbjct: 182 KNGNDNIVFAKEGNFSLTDNKRTLELRDGYRYSGTPGKADYNRVSFQHLSLIISTTPKLI 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + L+ +++E R++ + ++ ++A Sbjct: 242 DPVSHRRTIPTAQLI----------GSSNPQHQAELMWRISLTVSVLLLC---LLAVPLS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMI 354 + + I I++ + G +++ + + + +++ +L + + +L+ Sbjct: 289 YFNPRSGHTYNILIAIGLFLVYQNGLTFLRNAVEDGKIHFWLGLLPMHIIMFVIAVVLLR 348 Query: 355 KKKYT 359 + Sbjct: 349 VRSMP 353 >gi|319789792|ref|YP_004151425.1| permease YjgP/YjgQ family protein [Thermovibrio ammonificans HB-1] gi|317114294|gb|ADU96784.1| permease YjgP/YjgQ family protein [Thermovibrio ammonificans HB-1] Length = 354 Score = 86.2 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 55/352 (15%), Positives = 105/352 (29%), Gaps = 6/352 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + Y+ + F ++ + + VI + N+VS S +P Sbjct: 3 KKLDRYVFSEGVKFFFLTLTTFLTLFAVIDFVSHFNMVSKVGAS--GAAAYILGRLPLYG 60 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 V P + T L+ + +EL + G S P++ L +L S+ + + Sbjct: 61 VRVIPIATLIATMVTLSRFSETSELTVARALGISTYRFSAPLVILGVLASVASVAVQETL 120 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLE-ENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P +++ KA +T + ++F+ ++ + P N + Sbjct: 121 LPAGLKRATEIALKAGEEVTNGPQKVPGVWFKDRAGDFVFFWELLPKNKRAERVSIIKVK 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + +I +L + V + + + L V Sbjct: 181 DFSPTGRIDAEEAIYKGGGRWLLREVFVRDFKELKS--TEKETLPINLGVSVKELLLSVN 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 L L R E + +L L PVI +I I + Sbjct: 239 NPEAMGLLELFLTIKRLSKLN-YDTNYLRVELYSKLALGLLPVITAIIGIPFGVYNPRNK 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 + + I + + F + P Y L LF +FLL Sbjct: 298 KGYTVLLAAIIVVSMWITVSLFLSLGKSEVLPPLYAAFAPLLLFGAVGLFLL 349 >gi|315500013|ref|YP_004088816.1| permease yjgp/yjgq family protein [Asticcacaulis excentricus CB 48] gi|315418025|gb|ADU14665.1| permease YjgP/YjgQ family protein [Asticcacaulis excentricus CB 48] Length = 379 Score = 86.2 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 43/358 (12%), Positives = 95/358 (26%), Gaps = 8/358 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSST-ESLNILLKISGYLIPTVL 61 YI+ + + + + I ++I ++ + S ++ + P ++ Sbjct: 21 RLTTYIITRCLMAIGTALVVVSSIIFLIDYVEISKSLGQRGDLSSLQIVGLLMLKSPNII 80 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 ++ PF F T + +NR +EL+ + G S + P +A +L + Sbjct: 81 LVLLPFAFLFGTLSAFVGLNRRSELIAMRAAGMSAWRFVLPAAGMAAILGALTVTVLSPA 140 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 + +A+ + T + E + D I + + I + Sbjct: 141 ATVLADQYDRFAAQQSQSDTRAKTGEIYLRQGDGKQQTVIHAREQSEDGRLIDASFWTFS 200 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVH----RKSPISKDISIMKFKSYTLQTESANSST 237 ID +L G R S + S + Sbjct: 201 LDEAEIPRFLTRIDASEA--VLRPGTWQLKSARVSKPGETTLYYNTLSIGSNLSPERAFN 258 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 N L Y ++ L L + + + Sbjct: 259 RFAAPQSTNFWQL-PGTIAQIESSGFSAAGYVLRLNQLLATPLMFAAMTALGAAFSLRLM 317 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + ++ I L + K E P ++ + L++ Sbjct: 318 RIGGLARLTLSGIVLGFMVFFLNQLCGSLGKAEVIPAFLAGWATPFAAFLTAMTLLVY 375 >gi|269140438|ref|YP_003297139.1| putative permease [Edwardsiella tarda EIB202] gi|267986099|gb|ACY85928.1| putative permease [Edwardsiella tarda EIB202] gi|304560231|gb|ADM42895.1| Predicted permease [Edwardsiella tarda FL6-60] Length = 366 Score = 86.2 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 53/354 (14%), Positives = 136/354 (38%), Gaps = 19/354 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + V + N++ + G IP + Sbjct: 2 IIIRYLVRETFKSQVAILFILLLIFFCQKMVRILGAVVNGDIPTNLVFSLLGLGIPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA + ++ + Sbjct: 62 LILPLSLFLGLLMTLGRLYTESEITVMHACGLSKAVLVKAAMALAFITGALALVNAFWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L E F D Y+ + +F+ R + Sbjct: 122 PWSSLHSDEVMAEARANPGLASLAEGQFQPSQDGNYVLFVGNVKDKKFHNVFLAQLRPSG 181 Query: 183 --THKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + + Q ++L+ G + + + +D I F Y+ ++ Sbjct: 182 SQRPSVVVADSGHLVEMKDGAQKVVLDSGTRYEGTAMLRDFRITDFVDYSAIIGHKSAML 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 A+ ++S L + ++R+EFH RLT ++ L+ Sbjct: 242 DPNNADQASMSALWH----------SQEPSFRAEFHWRLTLVFSVIVMALM---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + ++ ++ + ++ + F S + ++ P+++++ + L Sbjct: 289 VNPRQGRVLSMLPAMLLYLIFFLLQSSLRSNGGKD-KLDPMIWMWGVNGLYLLL 341 >gi|330874292|gb|EGH08441.1| hypothetical protein Pgy4_05802 [Pseudomonas syringae pv. glycinea str. race 4] Length = 328 Score = 86.2 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 44/320 (13%), Positives = 103/320 (32%), Gaps = 26/320 (8%) Query: 49 LLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAI 108 + I G+ +P L ++ P + + +E+ ++ TG S+ L+ + A Sbjct: 1 MFLIMGFRLPGFLQVILPLGLFLGILMAYGRLYLESEMTVLAATGMSQQRLLAITMGPAT 60 Query: 109 LLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFF--RLDDDLYIKISKYNP 166 L+ + + + P+ + L K F L F R + Sbjct: 61 LVGLLVAWLSFSLAPQGATQFSLLINKQDAMTEFDTLVPGRFQALRDGTRITYTKELSED 120 Query: 167 NNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQ---------AIILNDGEVHRKSPISKD 217 + L G+FI + R + + + +IL +G + +P + D Sbjct: 121 RSQLAGVFISEKRMSGDKSKDNGITVLVAEKGHQEVRPNGSRFLILENGYRYDGNPGAAD 180 Query: 218 ISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLT 277 ++K+ +Y S + S L+ +E R++ Sbjct: 181 YRVIKYDTYGAMLPKPEISEEITDREAIPTSELI----------GNPAPRSVAELQWRIS 230 Query: 278 QWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYY 335 L I L++I + ++ + + ++ + + + + P Sbjct: 231 LPLSVFIVTLMAIPL---SRVNPRQGRYLKLLPAILLYMSYLAILISVRSSLEKGKLPLS 287 Query: 336 IPILYLFLFCISSIFLLMIK 355 + + ++ +S LL Sbjct: 288 LGMWWVHGIYLSIGLLLFYW 307 >gi|256820290|ref|YP_003141569.1| permease YjgP/YjgQ family protein [Capnocytophaga ochracea DSM 7271] gi|256581873|gb|ACU93008.1| permease YjgP/YjgQ family protein [Capnocytophaga ochracea DSM 7271] Length = 495 Score = 86.2 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 51/304 (16%), Positives = 110/304 (36%), Gaps = 22/304 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI+ +FL + +V I I I+ ++ L I+ K Y IP + Sbjct: 1 MKILDRYIITQFLTNFLGALSILVLIFVFHTIFTYIDELAGRGLELWIIFKFLIYFIPQL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P++ P + + + N E + +G S + +++P++ L LLS+ F N Sbjct: 61 IPIIMPLAVVIASIMTFGAFAENYEFAAMKASGISLMRVMRPLIILMALLSLGTFFLANN 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + L + + E +F + +D+ IK+ K +N ++ + Sbjct: 121 VIPVAYREVYTLRSNIAKVKPAMAIAEGVFSNIGEDISIKVGKKRGDNDEFLENVLIHKK 180 Query: 181 TQTHKIYYAQSG--------SIDLDRQAIILNDGEVHRKSPISKD-------ISIMKFKS 225 T + + + +IL DG + + + + FK Sbjct: 181 TPDKVNRTVINAKRGELKSSKTNSNFLQLILEDGTYYEDIKTNSYEAQQKEPFAKVYFKK 240 Query: 226 YTLQTESANSSTIVLKAND-------QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQ 278 Y + + ++ + + N+ L + + + Y + +R Sbjct: 241 YIINLDLSHLNNVDFNEKTDATTYRMMNVGQLNYAIDSLRTDFKQNITDYGNNMFRRTGF 300 Query: 279 WLFP 282 + P Sbjct: 301 SVAP 304 Score = 41.5 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 12/95 (12%), Positives = 38/95 (40%), Gaps = 4/95 (4%) Query: 255 PNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSI 314 ++ YR +L+ + + + + ++ A A +R+ P+ I++ + Sbjct: 361 QSDLEYRYKLMNLHILNLSDKFALTVACFVLFFVA---APLGAFIRKGGIGMPLVIAMIL 417 Query: 315 SFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 ++ ++ + I +N P L ++ + + Sbjct: 418 FLAYYFIGMFMKN-IAENNTINPALAPWIPALILL 451 >gi|317046771|ref|YP_004114419.1| permease YjgP/YjgQ family protein [Pantoea sp. At-9b] gi|316948388|gb|ADU67863.1| permease YjgP/YjgQ family protein [Pantoea sp. At-9b] Length = 396 Score = 86.2 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 56/371 (15%), Positives = 127/371 (34%), Gaps = 23/371 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 32 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGEIPTNLVLTLLGLGVPEMAQ 91 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G + L+K + L +L SI I+ + Sbjct: 92 LILPLSLFLAILMTLGRLYTESEITVMHACGLGKSVLVKSAMILMLLTSIVAAINVIWLG 151 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +++ A+ + L F D + + NT +F+ R Sbjct: 152 PWSSRYQDEVTQNAKANPGAAALAAGQFQTSSDGNAVLFVEDVRGNTFGNVFLAQLRPKG 211 Query: 183 T--HKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + L+ G + + +D I F Y + Sbjct: 212 NARPSVVLADSGHMEQRPDGSQIVTLDKGTRFEGTAMLRDFRITDFVDYKALIGYKQAVL 271 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 A ++ L T+ +E + RLT +I L+ + + Sbjct: 272 DPNDAEQADMRSLW----------QSNDPTFTAELNWRLTLVFSVLIMALMVVPLSVVNP 321 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLL--- 352 + + P + I F + K + +P + + +L + L Sbjct: 322 RQGRVLSMLPAMLLYLIFFLLQSSLKSNSAKGKFDPTLWMWVVNFAYLALAVGLNLWDTV 381 Query: 353 ---MIKKKYTK 360 I+ ++++ Sbjct: 382 PMRRIRARFSR 392 >gi|51474040|ref|YP_067797.1| hypothetical protein RT0862 [Rickettsia typhi str. Wilmington] gi|51460352|gb|AAU04315.1| conserved hypothetical protein (possible transmembrane protein) [Rickettsia typhi str. Wilmington] Length = 360 Score = 86.2 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 66/363 (18%), Positives = 157/363 (43%), Gaps = 11/363 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y ++ I ++ + I W+ QIL+ + L + + ++P + Sbjct: 1 MLLYRKYFIKNILPLLIIVTFSVTSIVWITQILKLLYLF-DKGIKVIDFFNLVVLVLPIL 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++ P + + ++ +L+I+ +G + I L P L++A+ + +F + + Sbjct: 60 LFILLPVITVISVLYIYNNLKVERQLIILQASGVNNIQLALPALYVALTVMLFAYYISST 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P +K + + S +EE F ++ ++ + I K N + GI I D+R+ Sbjct: 120 ILPLSHINLKSRLSFIKNNYISSMIEEKTFNKITKNITVFIDKKLAGNIMNGIIIFDNRN 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI-SKDISIMKFKSYTLQTESANS---- 235 I +A SG++++ I + R+ + +++ + F S ++ ++ +S Sbjct: 180 ADKPSIVFAGSGTLNIHGNNPIFELNKGLRQEYDVNGNLTQLTFDSLMIKLQNDSSLASQ 239 Query: 236 -STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + +AN+ +S LL P+ + + +E H+R+ L+ + +++ Sbjct: 240 RTQHNKEANEYYISELLTPSHDLVITKKI---KLIAEAHQRIIWPLYNFVLPCLALAVFL 296 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + ++ I +F +L++ V + + +N +I Y L +I L ++ Sbjct: 297 RYPYSKKTTFIPVLFSALTV-LLVTAIHFILQNFASKNLDFIFACYFNLLVALTIGLYLL 355 Query: 355 KKK 357 +K Sbjct: 356 VRK 358 >gi|261379717|ref|ZP_05984290.1| permease, YjgP/YjgQ family [Neisseria subflava NJ9703] gi|284797387|gb|EFC52734.1| permease, YjgP/YjgQ family [Neisseria subflava NJ9703] Length = 371 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 43/365 (11%), Positives = 143/365 (39%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ ++ + + + + ++ + Q + + + +++ +L + G+ + + P Sbjct: 2 IYQRNFIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ +I + + + + Sbjct: 62 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAILIAVMQLWVM 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFF---RLDDDLYIKISKYNPNNTLQGIFIVDSR 179 P ++ + + S +E F + + +Y + + ++ +F+ + Sbjct: 122 PWAELRSREYAEILKQKQELSLVEAGEFNSLGKRNGRVYFVETFDTESGIMKNLFLREQD 181 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANSS 236 I +A+ G S+ +++ + L DG + +P D + + F+ +L + Sbjct: 182 KNGNDNIVFAKEGNFSLTDNKRTLELRDGYRYSGTPGKADYNRVSFQHLSLIISTTPKLI 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + L+ +++E R++ + ++ ++A Sbjct: 242 DPVSHRRTIPTAQLI----------GSSNPQHQAELMWRISLTVSVLLLC---LLAVPLS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMI 354 + + I I++ + G +++ + + + +++ +L + + +L+ Sbjct: 289 YFNPRSGHTYNILIAIGLFLVYQNGLTFLRNAVEDGKIHFWLGLLPMHIIMFVIAVVLLR 348 Query: 355 KKKYT 359 + Sbjct: 349 VRSMP 353 >gi|171913020|ref|ZP_02928490.1| permease YjgP/YjgQ family protein [Verrucomicrobium spinosum DSM 4136] Length = 385 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 56/384 (14%), Positives = 123/384 (32%), Gaps = 33/384 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS--TESLNILLKISGYLIP 58 ++ F+ YI R + S L L + + + + + + + + L + + Y+IP Sbjct: 3 LRIFDRYIWRQVSSSTLTGVLVLTGVMVLGNVFKEMERLLGDTASLPLMAVAQFITYVIP 62 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 L P+ V M+ + E+ + TG S + V L+I +S ++ Sbjct: 63 YSLIFTIPWALLTAILLVFGRMSADNEMTALRMTGMSMPRICAAVFALSIFMSGVCYLVN 122 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 + P ++ IK+L L + I + N I + Sbjct: 123 VELAPLAKTKIKRLFYDLALDDPAVLFQPGKVLDRFPGYRIFTQEREGNKLKNVEII-QT 181 Query: 179 RDTQTHKIYYAQSGSIDLD----RQAIILNDGEVHRKSP--------------ISKDISI 220 + + A+ + + + L + V Sbjct: 182 NLGRAERYIRAKRAEVVVTPGVTDFQLHLRNATVETGGGEADAASAGGEVNIMNDLQFLY 241 Query: 221 MKFKSYTLQTESANSSTIVLKANDQNLSFLLNP------NPNNPNYRPELLETYRSEFHK 274 M + T T + ++ ++ S L + + + +L+ R+E Sbjct: 242 MGDTAITFPLSKLKEKTERVTSSMKDTSALWSEVNTGISSVDGQPLSEKLISVSRTELSM 301 Query: 275 RLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY 334 R + L ++F L+ I QR++ F I + F ++ + + P Sbjct: 302 RYSFSLAAIVFTLVGIPLGITA----QRRETSIGFALSLIVAVSYMVFVIFVNGLNERPS 357 Query: 335 YIP--ILYLFLFCISSIFLLMIKK 356 P ++++ + M K Sbjct: 358 VYPHLLMWIPNLIFIGVGSRMFYK 381 >gi|58040480|ref|YP_192444.1| hypothetical protein GOX2052 [Gluconobacter oxydans 621H] gi|58002894|gb|AAW61788.1| Hypothetical transmembrane protein [Gluconobacter oxydans 621H] Length = 393 Score = 85.8 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 54/367 (14%), Positives = 132/367 (35%), Gaps = 22/367 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y+L + F ++ L ++ + ++L + ++S+ SL + + L+P Sbjct: 16 ILDRYLLTQMAPPFAIALLAMLIALLLERLLSLFDYLASAGSSLGTCIALLTDLLPHYFG 75 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + + M+ N E+ + S + + +P + + +LL I+ Sbjct: 76 IALPAALCIAVFLTIRGMSDNNEIDALQAGRVSLMRISRPFMIVGLLLGAASVFLYGYIQ 135 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTL-QGIFIVDSRDT 181 P R + A+ +L+ +F + + T + +FI + Sbjct: 136 PVARYDYRAGFYFAEHTGWAPHLQAGMFASTSSKAVMTADSVSHAGTRLRRVFIREVNAN 195 Query: 182 QTHKIYYAQSGSIDLDRQAII----LNDGE-----VHRKSPISKDISIMKFKSYTLQTES 232 I A++G++ + + L +GE P ++ + + + Sbjct: 196 GVAHIITARTGALTISEKTRSTRLDLWNGEIVDDPFQATKPHKPTVTHFEHVVRVIDRPN 255 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYR--PELLETYRSEFHKRLTQWLFPVIFGLISI 290 +S A+++ L+ L ++ Y T R+E R+ + + +++ Sbjct: 256 KETSFRSRGADERELT--LFELAHDLRYGLPGIEYRTLRAEMDFRMARAIAIPFIPPLAV 313 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF----LFCI 346 A +R+K I++++ F H + L ++ LFC+ Sbjct: 314 ALAISA----RRRKSVWGLIAVAVILIGFDQTLMFGHSLASTGRLPIWLAIWVPELLFCV 369 Query: 347 SSIFLLM 353 + L+ Sbjct: 370 GCLAALL 376 >gi|256829583|ref|YP_003158311.1| permease YjgP/YjgQ family protein [Desulfomicrobium baculatum DSM 4028] gi|256578759|gb|ACU89895.1| permease YjgP/YjgQ family protein [Desulfomicrobium baculatum DSM 4028] Length = 392 Score = 85.8 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 66/367 (17%), Positives = 129/367 (35%), Gaps = 21/367 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + + + +G +S + + + ++LQ +L + L+K+ YL P L Sbjct: 6 LLQRELFKEMGIVASISLGGFLSLILLGRLLQLRDLFMGQGVTFFDLVKLFTYLSPFFLI 65 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M+ P + M + EL+ + G S L+ L L +L S Sbjct: 66 MLIPVSCMLGVFLTFLRMGADRELISLRAGGVSLWPLLPAPLLLCLLCSALTVWISLSGI 125 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSRDT 181 + + T ++ +F L + + +P + L +F++DS + Sbjct: 126 SWGMDNFRNTVVELARNKTSVNVQPGVFNTSFPGLTVYARQSDPGSGALLDVFVLDSSRS 185 Query: 182 QTHKIYYAQSGSIDLD----RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS- 236 +T A G I+ D + + L DG V+R ++S++ F+SY L + Sbjct: 186 KTRATIVAPLGRIESDSERGQVFVRLEDGHVYR--EQGGELSVISFESYILSLDMTRLLG 243 Query: 237 --TIVLKANDQNLSFLLNPNPNNPNYRP--ELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + KA + L + E HKR + ++ G Sbjct: 244 GFELKDKAPKEMSWDDLRTLKGDGFEDRSVNFQRRVDIELHKRFSLPAACIVLG----FF 299 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF-----CIS 347 A A Q K I+ +F +++ F + + P L L+L + Sbjct: 300 ALPLAFFFQGMKRQFGLIACLGTFFLYYVFLSGGMALAEGGIIAPALALWLPNVVFMLAA 359 Query: 348 SIFLLMI 354 I + ++ Sbjct: 360 GIGMWLV 366 >gi|124006213|ref|ZP_01691048.1| putative permease, YjgP/YjgQ family [Microscilla marina ATCC 23134] gi|123988137|gb|EAY27795.1| putative permease, YjgP/YjgQ family [Microscilla marina ATCC 23134] Length = 491 Score = 85.8 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 48/285 (16%), Positives = 105/285 (36%), Gaps = 20/285 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + +L+ F+++ +VFI V Q+LQ ++ S + ++ Y + Sbjct: 1 MKKIDKLVLQSFFGPFILTLSVLVFIFLVQQLLQYLDEFMGKGLSYLVFAELVFYFSLHI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +PMV P + + ++ + EL + ++G S I ++ P+ + + ++ F N Sbjct: 61 IPMVLPLATLLASLITFGNLGEHHELTAMKSSGISLIRVLTPLFMVVVCFAVVSFWFNNS 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I PK L + ++E F+ + IK++ P+ I+ Sbjct: 121 IVPKANLDAYSLLYDIRQTKPALDIKEGAFYGGIPNYSIKVNHKFPDGRTLKDVIIYDHS 180 Query: 181 T--QTHKIYYAQSGSIDLDRQAII----LNDGEVH-------------RKSPISKDISIM 221 ++ A SG + + L G + S M Sbjct: 181 GRRGNKQVILADSGQMYTFDKGNFLAFELFKGVRYHELPTREGARPSEEFLKSKFKHSKM 240 Query: 222 KFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLE 266 F + ++ + + +N++ L N + ++ + + LE Sbjct: 241 IFSLESFNMDTTDKNLFKSNKIMRNVTEL-NKDIDSLTRKRKDLE 284 >gi|238785038|ref|ZP_04629035.1| Inner membrane protein yjgP [Yersinia bercovieri ATCC 43970] gi|238714079|gb|EEQ06094.1| Inner membrane protein yjgP [Yersinia bercovieri ATCC 43970] Length = 364 Score = 85.8 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 56/361 (15%), Positives = 124/361 (34%), Gaps = 19/361 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFSQKLVRILGAAVDGEIPTNLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G + +LI L LA+ S ++ + Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGMGKKSLILAALILALGTSALAAVNTIWLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+ + + L F D +F+ R Sbjct: 122 PWSSKHQDEVLNDARANPSLAALAGGQFKSSTDGNSALFIGNVTGKEFNRVFLAQLRPNG 181 Query: 183 T--HKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q +ILN G + + + +D I F Y Sbjct: 182 NQRPSVVVADSGHMTERPDGSQVVILNKGTRYEGTALLRDFRITDFVDYQAIIGHQEVQQ 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 A + L N + R+EFH RLT + VI L+ Sbjct: 242 NSNVAEQMTMKQLWRSNEADA----------RAEFHWRLTLIVSVVIMALL---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ ++ + ++ + F S + N P+L+++ + + +I Sbjct: 289 VNPRQGRVLSMLPAMLLYLIFFLLQSSLRSNAG-NGKLDPLLWMWTVNGVYLAIAVILNL 347 Query: 358 Y 358 + Sbjct: 348 W 348 >gi|325110017|ref|YP_004271085.1| permease YjgP/YjgQ family protein [Planctomyces brasiliensis DSM 5305] gi|324970285|gb|ADY61063.1| permease YjgP/YjgQ family protein [Planctomyces brasiliensis DSM 5305] Length = 392 Score = 85.8 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 52/394 (13%), Positives = 124/394 (31%), Gaps = 44/394 (11%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI + R F M I + + + Q+ S + +++I Y++ ++ Sbjct: 1 MKLLQRYITMELFRVFAMVLTGISVLLVFVGVFQQ---ASENGLGAMEVIQILPYVLYSL 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP+ P + T V M + EL G + ++LI P L + +LS+ + + Sbjct: 58 LPITIPATMLLTVTVVYGRMAGDQELTAARAAGINLLSLIWPSLLMGAMLSVLALLLTDQ 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P I++ + L + F + + TL I + D Sbjct: 118 VIPWSIQKIQETVLVKMEKIFLDQLRADHQFVESNQGLAITVIDVQDKTLIKPTIRYTPD 177 Query: 181 TQTHKIYYAQSGSIDLD-RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 A+S I + ++ + + ++ + Y + Sbjct: 178 NGQIFTIQAESARIRFNIQERTAWIKIVGGYINMDDGHGAWIREEEYPFPLPMVDKQPKA 237 Query: 240 LKANDQNLSFLLNPNPNNPNYR-----------------------------------PEL 264 + +S L + + Sbjct: 238 RHMAVKEISEELEEITATRRQQESHRVLARSSHLLTGHFEQLAMSSFVELVQQQHVDNQR 297 Query: 265 LETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSY 324 ++ +E+H R F L+ + +A +R+ + F+ +++ Sbjct: 298 VDRLSTEYHSRFALAGSCFFFVLVGSPFSIMQA---KRQFLTSFFMVFMPIVFLYYPVVM 354 Query: 325 IIHKIEQNPYYIP--ILYLFLFCISSIFLLMIKK 356 + +N P ++++ I + ++++ Sbjct: 355 LAMNQSKNGMVPPESVMWIANVATGVIGIYLLRR 388 >gi|240113703|ref|ZP_04728193.1| hypothetical protein NgonM_09082 [Neisseria gonorrhoeae MS11] gi|268599771|ref|ZP_06133938.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11] gi|268583902|gb|EEZ48578.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11] Length = 396 Score = 85.8 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 43/365 (11%), Positives = 141/365 (38%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ +++ + + + + ++ + Q + + + +++ +L + G+ + + P Sbjct: 27 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTP 86 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ +I + + + + Sbjct: 87 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAILIAVMQLWVI 146 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD---LYIKISKYNPNNTLQGIFIVDSR 179 P ++ + + S +E F L +Y + + ++ +F+ + Sbjct: 147 PWAELRNREYAEILKQKQELSLVEAGEFNNLGKRNGRVYFVETFDTESGIMKNLFLREQD 206 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANSS 236 I +A+ G S++ +++ + L G + +P D + + F+ L + Sbjct: 207 KNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTTPKLI 266 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + + L+ +++E R++ + ++ ++A Sbjct: 267 DPVSHRRTISTAQLI----------GSSNPQHQAELMWRISLTVSVLLLC---LLAVPLS 313 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMI 354 + + I I++ + G + + + + +++ +L + + +L+ Sbjct: 314 YFNPRSGHTYNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFVIAIVLLR 373 Query: 355 KKKYT 359 + Sbjct: 374 VRSMP 378 >gi|325971215|ref|YP_004247406.1| permease YjgP/YjgQ family protein [Spirochaeta sp. Buddy] gi|324026453|gb|ADY13212.1| permease YjgP/YjgQ family protein [Spirochaeta sp. Buddy] Length = 361 Score = 85.8 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 40/365 (10%), Positives = 112/365 (30%), Gaps = 9/365 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI+R I ++ + + + + ++ + S ++ K++ P Sbjct: 1 MKVIDRYIIRSIASVAFVTLMLCTLMLLSVDLFANLDSYLTRKVSYLMIAKLTLLYTPEA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + L+ + N EL+ + +G S ++ P+L + LS F F Sbjct: 61 VLFALGPALLFSASFFLSQLQANNELICLMGSGLSYRRIVIPILMFGLALSTFQFGFSEY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTL--QGIFIVDS 178 + + + + + +Y+ Q + ++ Sbjct: 121 VHIPLSKEREVQEDSLFGLRSTYDNRNITLRDPEGAYVVHARQYSDREKRLAQVMLVLID 180 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 A + ++ L + + + + + + + S Sbjct: 181 EKGSLKSRIDAPWAYWEEEKGIWRLEQARNQQVDSSLLVLHQTEEQVLYVDSFTLQPSFF 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETY---RSEFHKRLTQWLFPVIFGLISIVAADK 295 +ND L Y ++F KRL L P++ I+ Sbjct: 241 RNVSNDIKTMELRTAYHYLQRIAELDPNRYPQLATDFAKRLLDSLNPLVMLFIACAI--- 297 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + ++ + I+ +++ + + + P+ + + I + + + + Sbjct: 298 -SYKYKKNVLLFSIITSLGIAVIYYVVQMVTLIMAKQAVIGPLWGMAIPMIVIVCIALAE 356 Query: 356 KKYTK 360 + + Sbjct: 357 RAAIR 361 >gi|118590093|ref|ZP_01547496.1| permease YjgP/YjgQ [Stappia aggregata IAM 12614] gi|118437065|gb|EAV43703.1| permease YjgP/YjgQ [Stappia aggregata IAM 12614] Length = 364 Score = 85.8 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 46/356 (12%), Positives = 108/356 (30%), Gaps = 13/356 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTV 60 ++ LY ++ L LF + ++ +L+ + S+ + IS +P + Sbjct: 5 RTLSLYFSGRFLKAILGLFLFAAVLIYLFDVLELVRRGGDREGFSVLRVAMISALRVPLL 64 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V PF +++R EL++ +G S P + + I+L I N Sbjct: 65 LEQVIPFTVLFGAIAAFVTLSRALELVVARASGISVWQFSLPAILVGIILGILSITVYNP 124 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-----LYIKISKYNPNNTLQGIFI 175 + +++A + L+ + + D + + TL Sbjct: 125 AAVWFQQKSDEVAAGLFGSEQSFLLQSSNDVWVRQDGLDGESVLLAKQLLEGGTLLRGVT 184 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + + D ++ L Q L + V+ + + ++ + Sbjct: 185 IFTFDKDGTFRERIEADEARLGDQIWYLENAIVYTTEQDPQPYGQYQISTF---LTATEV 241 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + + L Y ++ L + L V LI+ + Sbjct: 242 RESIGSPESISFWNLPR-FIELARNAGLPAYRYNLQYQTLLARPLLLVAMILIAAAVSL- 299 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + R I + F ++ + + P++ + I + + Sbjct: 300 -KVSRFGGLGSMILGGILSGFVLY-VLTELAKDFGGAGIVPPLVAAWAPGIFGVLM 353 >gi|34581065|ref|ZP_00142545.1| hypothetical protein [Rickettsia sibirica 246] gi|28262450|gb|EAA25954.1| unknown [Rickettsia sibirica 246] Length = 338 Score = 85.8 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 61/341 (17%), Positives = 145/341 (42%), Gaps = 11/341 (3%) Query: 23 IVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNR 82 + I W+ QIL+ + L + + ++PT+L ++ P + + ++ Sbjct: 1 MTSIVWITQILKLLYLF-DKGIKVMDFFSLIVLVLPTLLFILLPVIMVITVIYIYNNLKV 59 Query: 83 NTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTF 142 +L+I+ +G + + L P L++A+++ + + + I P +K + Sbjct: 60 ERQLIILQTSGVNNVQLALPALYVALIVMLLAYYISSNILPLSHINLKSRLNFIKNNYIS 119 Query: 143 SYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAII 202 S +EE F ++ D+ + I K + N + G+ I D+R+ + +A SG++++ + I Sbjct: 120 SMIEEKTFNKVTKDITVFIDKKSAGNIMNGVIIFDNRNADNPSVVFAGSGTLNIYDNSPI 179 Query: 203 LNDGEVHRKSPI-SKDISIMKFKSYTLQTESANS-----STIVLKANDQNLSFLLNPNPN 256 + R+ + +++ + F S ++ ++ N + +AN+ +S LL P + Sbjct: 180 FELNKGIRQEYDVNGNLTQLTFDSLMIKLQNDNPLVSQRTKHNKEANEYYISELLAPPHD 239 Query: 257 NPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISF 316 + +E H+R+ L+ + +++ + R++ P+ S Sbjct: 240 LAITKKI---KLIAEAHQRIIWPLYNFVLPFVALAVFLRYPY-RKKTTFMPVLFSALTVL 295 Query: 317 GVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 V + + +N +I Y L +I L + +K Sbjct: 296 LVTSIHFILQNFASKNLDFIFACYFNLVIALTIGLYLFVRK 336 >gi|209548670|ref|YP_002280587.1| permease YjgP/YjgQ family protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534426|gb|ACI54361.1| permease YjgP/YjgQ family protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 362 Score = 85.8 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 42/353 (11%), Positives = 116/353 (32%), Gaps = 10/353 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + Y R + + + I++++ + +S ++ + ++ +P +L Sbjct: 5 TLSRYFFRRYMVTMGWFLIGVSAISFLLDFSETAGRMSGLPGYTIGGGILMTAVRLPLIL 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PF VL +NR EL++ G S + P + +++L + + N + Sbjct: 65 QQTVPFIALFVGMTVLIGLNRKYELVVTRAAGISVWQFMFPFIAGSLILGLLTMTALNPL 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 + + + + + + + G ++D+ Sbjct: 125 AAWGQRQALLVESDWRGENAVLRKAPQIPWLRQISGRDDVIIGAHTVQENGTKLIDAVLI 184 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + + D L DG + + + + + ++Q + V + Sbjct: 185 HFDS---SGQVILRQDAATAKLEDGYWQLNNVVERKPGEIPMRKASVQLRTNLKQDFVQE 241 Query: 242 ---ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 A + F L+ + ++F+ L+Q L V I+ + K + Sbjct: 242 RLTAPETIGFFDLSNRIAAAKSFGISTKALETQFNSLLSQPLLLVAMTFIAATVSLKFSR 301 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 Q + + + +S + + + ++ + P + ++ I ++ L Sbjct: 302 FNQSR---SVILGGILSGFMLYVITVLVKAFGSSGVVPPFVATWIPMIVALAL 351 >gi|170718034|ref|YP_001785074.1| permease YjgP/YjgQ family protein [Haemophilus somnus 2336] gi|168826163|gb|ACA31534.1| permease YjgP/YjgQ family protein [Haemophilus somnus 2336] Length = 367 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 49/357 (13%), Positives = 115/357 (32%), Gaps = 19/357 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + RS + ++ + + Q+++ + S +++ + +PT+ Sbjct: 2 ILIRYLTKEVFRSQIAILSILLLLFFSQQLVRVLGSASVGKIPADLVFALLSLGMPTMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P C + + +E+ ++ G + L+ L L++L + + + Sbjct: 62 LIFPLCLFIAILLTFGRLYAESEITVMRACGVGQRILVGVALILSLLTAGLATYNVFYLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIKISKYNPNNTLQGIFIVDSRDT 181 P QL A+ T L F + + D+ + I++ N Sbjct: 122 PWAMQKQIQLIDDAKANPTMGALASGQFVNVGNTDVVLFINEIKNNQIQDIYVFQMENKK 181 Query: 182 QTHKIYYAQS----GSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 ++ Q + L + + S + D I F Y + + Sbjct: 182 NQKPSVTVAETGQLKALPNGDQVLSLENSQRVEGSALLPDFRITHFDQYQAYLDYKTTDK 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + +L L+N ++E H RLT I LI++ Sbjct: 242 DTSETEILSLKELIN----------SKSPAAKAELHWRLTLIFAVPIMALIAVPL---SR 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-PYYIPILYLFLFCISSIFLLM 353 + ++ + I +L + F S + + L + +L+ Sbjct: 289 VNPRQGRFAKILPALLLYLIYFLLQSSLKSAGASGKIEAHIFMPLVSIFFLFLAVLL 345 >gi|262277384|ref|ZP_06055177.1| putative permease, YjgP/YjgQ family [alpha proteobacterium HIMB114] gi|262224487|gb|EEY74946.1| putative permease, YjgP/YjgQ family [alpha proteobacterium HIMB114] Length = 360 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 46/323 (14%), Positives = 102/323 (31%), Gaps = 5/323 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 Y + F++ L + + W Q + + LV+ +++ K + P +L Sbjct: 4 NKVYRYFFIEFFKLFILINLSLSLLIWFTQAARLLELVTDYGNPISVYAKYLLLIYPKIL 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 F + + + + EL I +G S+ + + +++ I+ I I Sbjct: 64 DNTFLLSFIISLFFLYSKFETDNELQIYWLSGISKFKIHQLCIYIGIVSLIINLSFSIFI 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + ++ L + ++E F L + + K N ++GIFI Sbjct: 124 APWSSYQGRMILGNSKFTLINAVVKEKNFNSPLKGLTVYVEKNNKQGNIEGIFIY----- 178 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + + A+ G + D L + ++ +KF++ Sbjct: 179 EKTRTITAEKGEVLSDENGSYLKLINGTTQEKTGSKVNFLKFQNTIFDFSKYQIKNTTAP 238 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + + L N +N R E + R+ + +I + Sbjct: 239 KYSERNLYWLINNLDNKKISKARKIELREEINSRIIKPFMILILTSLISFLIFTNNENIN 298 Query: 302 RKKIHPIFISLSISFGVFWGFSY 324 KK S+ + Sbjct: 299 SKKFKFYIYCFSVLGIILNEILV 321 >gi|225075102|ref|ZP_03718301.1| hypothetical protein NEIFLAOT_00101 [Neisseria flavescens NRL30031/H210] gi|224953586|gb|EEG34795.1| hypothetical protein NEIFLAOT_00101 [Neisseria flavescens NRL30031/H210] Length = 373 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 43/365 (11%), Positives = 145/365 (39%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ ++ + + + + ++ + Q + + + +++ +L + G+ + + P Sbjct: 2 IYQRNFIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ +I + + + + Sbjct: 62 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAILIAVMQLWVM 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFF---RLDDDLYIKISKYNPNNTLQGIFIVDSR 179 P ++ + + S +E F + + +Y + + ++ +F+ + Sbjct: 122 PWAELRSREYAEILKQKQELSLVEAGEFNSLGKRNGRVYFVETFDTESGIMKNLFLREQD 181 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANSS 236 I +A+ G S++ +++ + L +G + +P D + + F++ +L + Sbjct: 182 KNGNDNIIFAKEGNFSLNDNKRTLDLRNGYRYSGTPGRADYNRVSFQNLSLIISTTPKLI 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V S L+ +++E R++ + ++ ++A Sbjct: 242 DPVSHRRTIPTSQLI----------GSSNPQHQAELMWRISLTVSVLLLC---LLAVPLS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMI 354 + + I I++ + G +++ + + + +++ +L + + +L+ Sbjct: 289 YFNPRSGHTYNILIAIGLFLIYQNGLTFLRNAVEDGKIHFWLGLLPMHIIMFVIAVVLLR 348 Query: 355 KKKYT 359 + Sbjct: 349 VRSMP 353 >gi|238023199|ref|ZP_04603625.1| hypothetical protein GCWU000324_03126 [Kingella oralis ATCC 51147] gi|237865582|gb|EEP66722.1| hypothetical protein GCWU000324_03126 [Kingella oralis ATCC 51147] Length = 368 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 48/365 (13%), Positives = 137/365 (37%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + ++ + + ++ I Q + + + +++ + + G+ + P Sbjct: 2 IYHRQFIKETTLTAIAIFFVVLAILVFTQGINMLGRAADGRVAVDAVTTLIGFWTLGMTP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ I ++G I+PVL A+ L++ + + + Sbjct: 62 LLLVLTAYISTLTVLTRYWRDSEMAIWLSSGLGLKKWIRPVLTFALPLAVLVATMQISVL 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD---DLYIKISKYNPNNTLQGIFIVDSR 179 P ++ + + S ++ F L +Y + N ++ +FI D Sbjct: 122 PWAEYRSREYAEILKQKQNLSLVQAGTFSELGKKDGRVYFVETFDTDNGIMKNLFIRDID 181 Query: 180 DTQTHKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT-ESANSS 236 +T + +A+ G D +++ ++L +G + D + F+ L + Sbjct: 182 ETGRDSVVFAKEGRFDLSNNKRTLVLTNGYRYSGIAGRGDFDQVSFQELNLIINTTPKVV 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + L+ Y++E R++ + ++ L++I Sbjct: 242 DPIDHRRTIPTAQLI----------GSSNPQYQAELMWRVSLPITVLLLSLLAIPL---S 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMI 354 + + + +++ G + + + + +++ +L + L I+ I++L+ Sbjct: 289 YFNTRSGNSYHVLLAVGFFLVYQNGLTLLRDAVEDGKINFWLGLLPMHLLMIACIWVLLR 348 Query: 355 KKKYT 359 + Sbjct: 349 MRSMP 353 >gi|78188415|ref|YP_378753.1| hypothetical protein Cag_0437 [Chlorobium chlorochromatii CaD3] gi|78170614|gb|ABB27710.1| conserved hypothetical protein [Chlorobium chlorochromatii CaD3] Length = 443 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 50/296 (16%), Positives = 101/296 (34%), Gaps = 14/296 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YIL+ F + + IV + + + ++++ + Sbjct: 1 MTILDRYILKKQIAPFFFAFITIVALLQLQFFSTFAERFIGKGITFVAIVELLALQSAWM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + ++ +E+ + +G S ++ PV+ +++LLS + N+ Sbjct: 61 VSFALPMAVLVAVVMSFGTLTTTSEMTVCRASGISLYRVMVPVIVVSLLLSFTVERFNNV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 + P+ K L A+ + L E F L D + + + + L+G+ I D Sbjct: 121 LLPQANYQAKSLMAEIARSKPAFGLTEQAFSTLVDGYSMYVRSSDERHGELRGVVIHDMT 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAII----LNDGEVHRK-SPISKDISIMKFKSYTLQTESAN 234 + A G ++ L +G +H+ P M F+ Y ES+ Sbjct: 181 RPEYRTTITATRGRVEFTPDYQYLVMTLRNGAIHQLQQPEKSGYRSMNFERYRFVFESSL 240 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 S N + L EF +R L V L+++ Sbjct: 241 SGFTPSSGNRM--------RADANELSAGELHAIGLEFRRREAVALLHVQAPLVAL 288 Score = 48.8 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 34/91 (37%), Gaps = 8/91 (8%) Query: 265 LETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSY 324 Y + +HK+ + L V+F L+ R+ ISL F ++W Sbjct: 344 YNRYMAAYHKKYSLSLACVVFVLVGAPLGVLA---RRGGFGVGAAISLLF-FVLYWMLMI 399 Query: 325 IIHKIEQNPYYIPILYLF----LFCISSIFL 351 K+ + P++ ++ + + + L Sbjct: 400 SGEKMAERGVLDPMIAMWMADGVMALIGVGL 430 >gi|157829182|ref|YP_001495424.1| hypothetical protein A1G_07385 [Rickettsia rickettsii str. 'Sheila Smith'] gi|157801663|gb|ABV76916.1| hypothetical protein A1G_07385 [Rickettsia rickettsii str. 'Sheila Smith'] Length = 338 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 60/341 (17%), Positives = 148/341 (43%), Gaps = 11/341 (3%) Query: 23 IVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNR 82 + I W+ QIL+ + L + + ++PT+L ++ P + + ++ Sbjct: 1 MTSIVWITQILKLLYLF-DKGIKVMDFFSLIVLVLPTLLFILLPVIMVITVIYIYNNLKV 59 Query: 83 NTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTF 142 +L+I+ +G + + L P L++A+++ + + + I P +K + Sbjct: 60 ERQLIILQASGVNNVQLALPALYVALIVMLLAYYISSTILPLSHINLKSRLNFIKNNYIS 119 Query: 143 SYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAII 202 S +EE F ++ D+ + I K + N + G+ I D+R+ + +A SG++++ + I Sbjct: 120 SMIEEKTFNKVTKDITVFIDKKSAGNIMNGVIIFDNRNADNPSVVFAGSGTLNIYDNSPI 179 Query: 203 LNDGEVHRKSPI-SKDISIMKFKSYTLQTESANS-----STIVLKANDQNLSFLLNPNPN 256 + R+ + +++ + F S ++ ++ N + +AN+ +S LL P + Sbjct: 180 FELNKGIRQEYDVNGNLTQLTFDSLMIKLQNDNPLVSQRTKHNKEANEYYISELLAPPHD 239 Query: 257 NPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISF 316 + +E H+R+ L+ + +++ + ++ + +F +L++ Sbjct: 240 LAITKKI---KLIAEAHQRIIWPLYNFVLPFVALAVFLRYPYSKKTTFMPVLFSALTVLL 296 Query: 317 GVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 F + + +N +I Y L +I L + +K Sbjct: 297 VTSIHF-ILQNFASKNLDFIFACYFNLVIALTIGLYLFVRK 336 >gi|296122759|ref|YP_003630537.1| permease YjgP/YjgQ family protein [Planctomyces limnophilus DSM 3776] gi|296015099|gb|ADG68338.1| permease YjgP/YjgQ family protein [Planctomyces limnophilus DSM 3776] Length = 394 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 54/398 (13%), Positives = 121/398 (30%), Gaps = 44/398 (11%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YIL + + F +S + + +L+I ++IPT+ Sbjct: 2 MPLLQRYILVDLLKVFAVSAAGFTLLLVFAGVYVE---AKEHGLGPMQILQILPFIIPTL 58 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP P + V ++ + E++ G I+++ P L ++LSIF + + Sbjct: 59 LPFTIPTALLLTVCVVYGRLSGDQEIIAAKAAGIHIISVLWPAFLLGVVLSIFTLVITDQ 118 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF-FRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P I++ A A + F L+ D L I + F Sbjct: 119 MIPWSMKRIQRTIAMAVEDIFFDVLKAQNQLNLRDQGLSITVMDVRDRTLYMPTFRYMRG 178 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDIS-IMKFKSYTLQTESANSSTI 238 + DLDR +++ + + P + ++ + + + Sbjct: 179 NKPVTVQAKEARLRFDLDRDVVVMEFKDGYISLPDDANTRVRFRYDAREFPLPNRSQKAK 238 Query: 239 VLKANDQNL-----------------------SFLLNPNPNNPNYRPELLETYRS----- 270 + + L + + + + + Y+ Sbjct: 239 SRDMTSREILAETRAMATGDATATRQLAIEAALILASGDFDRFGEKEFAVSRYQVDEERN 298 Query: 271 -------EFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFS 323 E H R++ F L+ A A + + V++ S Sbjct: 299 RSMKLTTELHNRISMAFGCFFFVLVGAPFAVYMAKNQF---LTSFLFCFVPILVVYYPLS 355 Query: 324 YIIHKIEQNPYYIPILYLFLF-CISSIFLLMIKKKYTK 360 + + + P ++L ++ L I ++ + Sbjct: 356 MMAQNLSKVGKVDPSWAVWLPNGALTLGFLYIIRQLAR 393 >gi|311747143|ref|ZP_07720928.1| membrane protein [Algoriphagus sp. PR1] gi|126578851|gb|EAZ83015.1| membrane protein [Algoriphagus sp. PR1] Length = 604 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 48/269 (17%), Positives = 101/269 (37%), Gaps = 8/269 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + IL FL++ L + FI + +L+ + + I +++ Y + ++ Sbjct: 1 MKKLDKLILGSFIGPFLLTFLVVDFILLTVNMLKYFDEIFGKGLDFWIYMELISYFVISI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 PM P + + ++ + EL I ++G S I ++ + I+LS ++S N Sbjct: 61 SPMALPLAVLLSSLMTFGNLGEHFELTAIKSSGISLIRAMRSIGVFVIVLSFAAYLSNNH 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + PK L ++ ++E +F+ IK++K + L+ I I D Sbjct: 121 LVPKVNLKTFSLLYDIRMKSPALDIKEGVFYNGIPGYSIKVNKKLDDVRLKDIIIYDHTG 180 Query: 181 TQTHKIYYAQ-----SGSIDLDRQAIILNDGEVHRKSPISKDI--SIMKFKSYTLQTESA 233 Q + + + L +G + + S+ I + F + + Sbjct: 181 VQGNLNVTLADSGRMETFFNDSYMRLTLYNGINYSEERQSRGIAEKPVNFSRGEFE-TNV 239 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRP 262 ++ D+ L + N N Sbjct: 240 IVFSLDAFQMDRTPEDLWSTNRAIKNISG 268 Score = 51.5 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 48/121 (39%), Gaps = 8/121 (6%) Query: 245 QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKK 304 +NL + + Y ++++ TQ ++ +I A A++++ Sbjct: 463 RNLKNSFDVKKAQIDTDEREYRRYEISWYQKYTQAFACIVMFMIG---APLGAIIKKGGL 519 Query: 305 IHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMIK--KKYTK 360 P+ IS+ I F V++ + K + P++ + C+ L +K +K + Sbjct: 520 GMPVLISI-IFFIVYYMLTMTGEKWAKEGIIDPLIGTWFSNLCLIPFGLFFLKQARKDAR 578 Query: 361 I 361 + Sbjct: 579 L 579 >gi|330720162|gb|EGG98555.1| putative Permease [gamma proteobacterium IMCC2047] Length = 323 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 44/313 (14%), Positives = 101/313 (32%), Gaps = 5/313 (1%) Query: 41 SSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLI 100 +L +P + ++TP + + L + N+EL ++ G S + Sbjct: 11 EGDYGTPEVLMYVLMTVPKRIYVITPLAVLIGSLLGLGMLANNSELTVMRAVGMSVARIS 70 Query: 101 KPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIK 160 + A+L + + P + + A A+ + ++ D ++ Sbjct: 71 WAAIKPALLFVAAALLIGEFVVPHSENYAQSQRALAESRGEAVS-SKYGYWHRGGDTFMH 129 Query: 161 ISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISI 220 + P L G+ + D + + +A+ D +L + S + Sbjct: 130 FNAVLPGGVLYGVTQYEYDDKKLTRSLFAEKAIFQGD--HWVLKQIKHSYLSDTQVEAGE 187 Query: 221 MKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWL 280 + + +V+ D ++ L + N + + Y F K++ Q Sbjct: 188 DLTLRWDTELTPEVLKVVVVDPADLSIMGL-HTYTNYLKEQELDAKRYLLAFWKKVLQPF 246 Query: 281 FPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI-EQNPYYIPIL 339 V+ L+++ I L + F F + P + I+ Sbjct: 247 AIVVMVLVALSCIFGPLRSVTMGYRVFAGIILGVVFRYIEDFLGPASIVFGFEPVFASIM 306 Query: 340 YLFLFCISSIFLL 352 + +F I++ LL Sbjct: 307 PIAIFAIAAAVLL 319 >gi|182413838|ref|YP_001818904.1| permease YjgP/YjgQ family protein [Opitutus terrae PB90-1] gi|177841052|gb|ACB75304.1| permease YjgP/YjgQ family protein [Opitutus terrae PB90-1] Length = 369 Score = 85.1 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 40/369 (10%), Positives = 95/369 (25%), Gaps = 13/369 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M ++ ++LR + V + V + + L +P Sbjct: 1 MNLYDRHLLREWLAILGLVLCATVGLLLVQVLYDDFRDLRELGARGLDLWMYLFVTVPMY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L +V P + VL ++R E + G S + + PV + + + Sbjct: 61 LALVLPLALLVSLMFVLGKLHRANEFTALRAAGVSLLRITAPVWIVGMFACGLSWWLNTT 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEEN---------LFFRLDDDLYIKISKYNPNNTLQ 171 + P L + + + + D ++ Sbjct: 121 VVPWSVDESAALRDTMRFRKESNLMPPDRVSAVYSVGFDNPRADRMWFFNRYSKWTQKAY 180 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDIS----IMKFKSYT 227 G+ + + + + + +G P + ++ + Sbjct: 181 GVTVSIMDEHRRELQRIVAEQAWFEAERGWTFRNGRELTFRPDTGELESTVPFTERVEAQ 240 Query: 228 LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGL 287 + + I K D +L L Y + + L P+I Sbjct: 241 FREDPKLMLLIDRKPTDLSLPQLRRLIDYYAIEENPKGTPYAVRYFGLVADTLAPLIVIA 300 Query: 288 ISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCIS 347 I+I A V + + + S + K +P + + Sbjct: 301 IAIPFAVTGVRVNAAIGVSKSIGLFMLYYIFSNIASALAAKQLVDPMTAAWVPNIGMALV 360 Query: 348 SIFLLMIKK 356 + + + + Sbjct: 361 AGWFFVRLR 369 >gi|292493019|ref|YP_003528458.1| permease YjgP/YjgQ family protein [Nitrosococcus halophilus Nc4] gi|291581614|gb|ADE16071.1| permease YjgP/YjgQ family protein [Nitrosococcus halophilus Nc4] Length = 374 Score = 85.1 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 43/348 (12%), Positives = 118/348 (33%), Gaps = 20/348 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + YIL+ + + L ++ I I+ ++ + + +L +S Y L Sbjct: 8 RIVDRYILKELSLNVTAITLVLLLIFGGIRFIRFLGQATEGKVPGETILALSTYEAIGAL 67 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 ++ P + VL M ++E++++ G SR L++ VL ++L+I + + Sbjct: 68 VLLLPLAAFLAVILVLGRMANDSEIVVLFACGISRGHLLRVVLAFGLVLAIGVGCISLYL 127 Query: 122 EPKCRST-IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + + A T + N + + R+ Sbjct: 128 GPLASAEGYRLKQEAILAAETSGLVAGNFKKTKGGQWVFYAESLTEDRLGMRNVFIQVRE 187 Query: 181 TQTHKIYYAQSGSIDLD----RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 ++ + G + D + +IL +G + I I +F+ + + + + Sbjct: 188 PTQKILFRSSRGRLQTDGITGDKHLILEEGYRYDLVGNDVGIRISRFERHGILVKKGGAQ 247 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 ++ L +E R++ + ++ ++++ A Sbjct: 248 EFRIRHKTLPTLTLWEM----------GAPKDIAEVQWRVSMPIATLLLVMLAVPLA--- 294 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLF 342 L ++ + + ++ + + + E P + + ++ Sbjct: 295 RLEPRQGRYAGLVPAVLVYVIYSNMLGISRNWVEHEVIPASLGLWWVH 342 >gi|193214339|ref|YP_001995538.1| permease YjgP/YjgQ family protein [Chloroherpeton thalassium ATCC 35110] gi|193087816|gb|ACF13091.1| permease YjgP/YjgQ family protein [Chloroherpeton thalassium ATCC 35110] Length = 455 Score = 85.1 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 44/232 (18%), Positives = 97/232 (41%), Gaps = 6/232 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YIL+ F+ +VF+ + + + ++ +N+++++ I + Sbjct: 1 MTILTRYILKSHIGPFVFGFATVVFVFLMQFLARYLDRFVGKGLEMNVIIELIVLQIAWM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + T +M ++E+ I +G S + ++ P++ +L+ + NI Sbjct: 61 AVLAAPMAVLISTLMTFGNMVNSSEMTAIRASGISLLRIMIPIIVAGAILTYLMERFNNI 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 + P+ K L A LEEN+F + I K + + + G+ I D+R Sbjct: 121 VLPEANHQAKVLLMDISRAKPSFGLEENVFSDMIRGYTILARKTDEKSSNIAGVTIYDNR 180 Query: 180 DTQTHKIYYAQSGSIDLD----RQAIILNDGEVHRK-SPISKDISIMKFKSY 226 ++ + + A SG + + L GE+H +P + + F+++ Sbjct: 181 NSTRNVVITADSGFFEFTSDLRNMIMTLKHGEMHELVNPENHSYRRVNFETH 232 Score = 51.9 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 35/98 (35%), Gaps = 6/98 (6%) Query: 259 NYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGV 318 N L+ Y E HK+ + F + + R+ +SL I F + Sbjct: 350 NSNTRLINKYLVEVHKKYAIPFACLFFVFVGVPLGVLA---RRGGFGIGAGLSL-IFFLL 405 Query: 319 FWGFSYIIHKIEQNPYYIPILYLF--LFCISSIFLLMI 354 +W F K+ P + ++ IS I +++ Sbjct: 406 YWVFLIGGEKLADRDIVSPAIAMWMGNVVISVIGAVLL 443 >gi|188583149|ref|YP_001926594.1| permease YjgP/YjgQ family protein [Methylobacterium populi BJ001] gi|179346647|gb|ACB82059.1| permease YjgP/YjgQ family protein [Methylobacterium populi BJ001] Length = 362 Score = 84.7 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 43/349 (12%), Positives = 98/349 (28%), Gaps = 11/349 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTVL 61 + Y R+ L L + + + + ++ + S S ++ +++ Y P V Sbjct: 6 TLGRYFAWRFVRTILGVFLTVFALVYTLDFVELLRRAGDSEGASTGLMAQLALYRTPAVA 65 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 V PF + L ++R EL++ G S ++P F+A+ + + N + Sbjct: 66 ESVLPFAVLFGSMAALLQLSRKLELVVARAAGISAWQFLQPGAFVALAIGALAIGAYNPL 125 Query: 122 EPKCRSTIKQLSAKA---QLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 + ++ AK +D I+ T V Sbjct: 126 SAALKQRSSEIEAKIFAKSTKAGTGKDLWLRQRSVDGQAIIRAETAVEGTTTLAGVTVFQ 185 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 D ++ L L D V + + + + + Sbjct: 186 FDDAGVFTAQIEAARATLHDGWWELRDVRVLTRD---EPPESHEVYLVASTLDPSQIRQR 242 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 L + YR ++ L L + L++ + Sbjct: 243 FTPPESVPFWQLPETIARHERA-GLDATRYRLQYDVLLATPLLYLAMVLVAATVSL--RF 299 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCIS 347 R + +S F ++ + + + P + + + Sbjct: 300 FRFGGVGKLVLGGVSAGFVLYVARQVMEG-LGASGMVAPTVAAWFPAVV 347 >gi|28198044|ref|NP_778358.1| hypothetical protein PD0108 [Xylella fastidiosa Temecula1] gi|182680671|ref|YP_001828831.1| permease YjgP/YjgQ family protein [Xylella fastidiosa M23] gi|28056104|gb|AAO28007.1| conserved hypothetical protein [Xylella fastidiosa Temecula1] gi|182630781|gb|ACB91557.1| permease YjgP/YjgQ family protein [Xylella fastidiosa M23] gi|307579132|gb|ADN63101.1| permease YjgP/YjgQ family protein [Xylella fastidiosa subsp. fastidiosa GB514] Length = 368 Score = 84.7 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 43/368 (11%), Positives = 116/368 (31%), Gaps = 13/368 (3%) Query: 1 MKSF----ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYL 56 MK F + Y+ R + + L++ L ++ + V + + + S + Y Sbjct: 1 MKLFPCLHDRYVARAVVATVLLTWLVLLGLDVVNGFASEVRDIGKGSYSFGHAIAYIAYT 60 Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 +P + P + L + +EL + G SR L V+ + + + + + Sbjct: 61 VPRRAYTLFPTAAVIGMLLGLGQLAATSELTALRALGVSRTRLSLSVMMMIGMGTGLMVL 120 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI- 175 + + P ++ L A A+ + + F+ + ++++ G + Sbjct: 121 TGETLGPWAQAQADILKASAKYKSDMTGARYSGFWAREGEVFLNARSGEEKRLDSGGIML 180 Query: 176 ------VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ 229 + ++ ++ + IL + S + + Sbjct: 181 ILHDVRLYQLAADGRLQSMTRAARVEHHQDVWILQQVQRDTFSERGVQRETFDSLPWRSR 240 Query: 230 TESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 + A + + K + + L+ + + ++ R + + L + Sbjct: 241 LDPAVLAAGLAKPRNLSAHELVQ-SIEYRRRNHLDARDFEGQYWSRWFYPVNVLALCLAA 299 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 I + K + I ++SF + F I + + Y L + Sbjct: 300 IPFSFGLLRSGGMGKRTFLGILFALSFWMLQMFFERIASVLK-LNYQIFYLLPPMVMLCG 358 Query: 350 FLLMIKKK 357 + +++ Sbjct: 359 SYWLFRRQ 366 >gi|113460662|ref|YP_718728.1| permease [Haemophilus somnus 129PT] gi|112822705|gb|ABI24794.1| conserved permease [Haemophilus somnus 129PT] Length = 367 Score = 84.7 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 49/357 (13%), Positives = 114/357 (31%), Gaps = 19/357 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + RS + ++ + + Q+++ + S +++ + +PT+ Sbjct: 2 ILIRYLTKEVFRSQIAILSILLLLFFSQQLVRVLGSASVGKIPADLVFALLSLGMPTMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P C + + +E+ ++ G + L+ L L++L + + + Sbjct: 62 LIFPLCLFIAILLTFGRLYAESEITVMRACGVGQRILVGVALILSLLTAGLATYNVFYLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIKISKYNPNNTLQGIFIVDSRDT 181 P QL A+ T L F + + D+ + I++ N Sbjct: 122 PWAMQKQIQLIDDAKANPTMGALASGQFVNVGNTDVVLFINEIKNNQIQDIYVFQMENKK 181 Query: 182 QTHKIYYAQS----GSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + Q + L + + S + D I F Y + + Sbjct: 182 NQKPSVTVAETGQLKVLPNGDQVLSLENSQRVEGSALLPDFRITHFDQYQAYLDYKTTDK 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + +L L+N ++E H RLT I LI++ Sbjct: 242 DTSETEILSLKELIN----------SKSPAAKAELHWRLTLIFAVPIMALIAVPL---SR 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-PYYIPILYLFLFCISSIFLLM 353 + ++ + I +L + F S + + L + +L+ Sbjct: 289 VNPRQGRFAKILPALLLYLIYFLLQSSLKSAGASGKIEAHIFMPLVSIFFLFLAVLL 345 >gi|186476978|ref|YP_001858448.1| permease YjgP/YjgQ family protein [Burkholderia phymatum STM815] gi|184193437|gb|ACC71402.1| permease YjgP/YjgQ family protein [Burkholderia phymatum STM815] Length = 382 Score = 84.7 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 45/375 (12%), Positives = 111/375 (29%), Gaps = 25/375 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R + +F+ + + ++ +N V + P+ Sbjct: 1 MRIYEKYFARQVYLTFVFILFAFSGLFFFFDLINELNSVGHGNYKFQYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + I L ++ + Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEYTIFRVSGLATNQALRSLLKIGIPLVFLTYLIGEV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRL---------DDDLYIKISKYNPNNTLQ 171 + P +++ +A + S E ++ + ++ + + P+ T+ Sbjct: 121 VGPYTDQLSERVRLEALGSSVSSNFESGVWVKDTLTARADGEQVTRFVNVGQLQPDATIS 180 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRK-----------SPISKDISI 220 + I + +L D + ++ Sbjct: 181 NVRIYEFDSKFRLSNVRIAKSGKYQPPGHWLLTDVTDTQLIDVAQDASKPADALNPVYRA 240 Query: 221 MKFKSYTLQTE---SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLT 277 + + +++L A ++ F L + + + Y ++L Sbjct: 241 KQAALPEYSLRSELTPQILSVLLVAPERMSMFNLFRYIQHLTENHQDTQRYEIALWRKLL 300 Query: 278 QWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP 337 + ++S+ A I L +SF +F H N + P Sbjct: 301 YPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLFNTLF--SHIGNLNTWPAP 358 Query: 338 ILYLFLFCISSIFLL 352 + I + L Sbjct: 359 LTAATPALIYLVLGL 373 >gi|319793490|ref|YP_004155130.1| permease yjgp/yjgq family protein [Variovorax paradoxus EPS] gi|315595953|gb|ADU37019.1| permease YjgP/YjgQ family protein [Variovorax paradoxus EPS] Length = 369 Score = 84.7 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 45/370 (12%), Positives = 121/370 (32%), Gaps = 15/370 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSST---ESLNILLKISGYLI 57 MK+ I ++ L + + + + + V L L+ Sbjct: 1 MKTIRRLIYVEALKAVAFVTLGFLCLFFFFDFVDELQSVGKPESLAYGPMQALIYVTLLV 60 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 P+ L + P + V+ + +++E I+ +G ++ +L L + I F Sbjct: 61 PSHLYELLPITVLIGCIFVMARLAQSSEYTILRTSGLGPWRALRTLLLLGVGFVILTFAI 120 Query: 118 ENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS---KYNPNNTLQGIF 174 + I P T + L ++ Q + D++ ++ + Sbjct: 121 GDYIAPLSERTGQLLKSRYQGTYSLVGNTGAWLKEKRDNVSYAVNVLSISRDGSLKNARI 180 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRK----SPISKDISIMKFKSYTLQT 230 + K +S I A+ + + + + + + Sbjct: 181 FEFDANGYVSKQLVVKSARILDGHWALADIEKQDYDTRSAADKARIVTTEIPQMDWPTSL 240 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 + S +L+ + + L + + + + + Y EF +++ L ++ ++++ Sbjct: 241 TAEMVSVALLRPDRMSTIDLFD-YIRHLDANGQTAQRYEIEFWRKVFYPLSCLVMVVLAL 299 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYY---IPILYLFLFCI 346 A + + ISF + F Y+ + +P+ P L + + Sbjct: 300 PFAYLHFRQAGITTYVFGGVMIGISFFLLNNVFGYLGNLSNWSPWLTAAAPGLIYSVMSL 359 Query: 347 SSIFLLMIKK 356 ++ L++++ Sbjct: 360 TAFSWLVLRR 369 >gi|239815706|ref|YP_002944616.1| permease YjgP/YjgQ family protein [Variovorax paradoxus S110] gi|239802283|gb|ACS19350.1| permease YjgP/YjgQ family protein [Variovorax paradoxus S110] Length = 369 Score = 84.7 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 48/369 (13%), Positives = 124/369 (33%), Gaps = 13/369 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSST---ESLNILLKISGYLI 57 MK+ I ++ L + + + + + + L LI Sbjct: 1 MKTIRRLIYVEALKAVAFVTLGFLSLFFFFDFVDELQSIGRPESLAYGPAQALIYVTLLI 60 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 P+ L + P + V+ + +++E I+ +G ++ +L L + F Sbjct: 61 PSHLYELLPITVLIGCIFVMARLAQSSEYTILRTSGLGPWRALRTLLLLGVGFVFLTFAI 120 Query: 118 ENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT---LQGIF 174 + I P T + L ++ Q + + +++ ++ + Sbjct: 121 GDYIAPASERTGQLLKSRYQGSYSLVGNTGAWLKEKRENVSYAVNVLSIARDGSLKNARI 180 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + K A S I D + + + + ++ I+ K L + Sbjct: 181 FEFDANGYVRKQLVASSARIFDDHWQLSDVELQDYETRISAEKARIVTTKVPQLDWPTTL 240 Query: 235 SSTIVLKA---NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 +S +V A D+ + L + + + Y +F +++ L ++ ++++ Sbjct: 241 TSEMVSVALLRPDRMGTLDLFDYIRHLEANGQTAQRYEIQFWRKVFYPLSCLVMVVLALP 300 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYY---IPILYLFLFCIS 347 A + + ISF + F Y+ + +P+ P L + ++ Sbjct: 301 FAYLHFRQAGITTYVFGGVMIGISFFLLNNVFGYLGNLSNWSPWLTAAAPGLIYSVMSLA 360 Query: 348 SIFLLMIKK 356 + L++++ Sbjct: 361 AFSWLVLRR 369 >gi|268683689|ref|ZP_06150551.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679] gi|268623973|gb|EEZ56373.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679] Length = 384 Score = 84.7 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 43/365 (11%), Positives = 141/365 (38%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ +++ + + + + ++ + Q + + + +++ +L + G+ + + P Sbjct: 15 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTP 74 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ +I + + + + Sbjct: 75 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAILIAVMQLWVI 134 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD---LYIKISKYNPNNTLQGIFIVDSR 179 P ++ + + S +E F L +Y + + ++ +F+ + Sbjct: 135 PWAELRNREYAEILKQKQELSLVEAGEFNNLGKRNGRVYFVETFDTESGIMKNLFLREQD 194 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANSS 236 I +A+ G S++ +++ + L G + +P D + + F+ L + Sbjct: 195 KNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTTPKLI 254 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + + L+ +++E R++ + ++ ++A Sbjct: 255 DPVSHRRTISTAQLI----------GSSNPQHQAELMWRISLTVSVLLLC---LLAVPLS 301 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMI 354 + + I I++ + G + + + + +++ +L + + +L+ Sbjct: 302 YFNPRSGHTYNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFVIAIVLLR 361 Query: 355 KKKYT 359 + Sbjct: 362 VRSMP 366 >gi|254445062|ref|ZP_05058538.1| putative permease, YjgP/YjgQ family [Verrucomicrobiae bacterium DG1235] gi|198259370|gb|EDY83678.1| putative permease, YjgP/YjgQ family [Verrucomicrobiae bacterium DG1235] Length = 388 Score = 84.7 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 54/383 (14%), Positives = 111/383 (28%), Gaps = 31/383 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQIL-QRINLVSSSTESLNILLKISGYLIPT 59 M YIL+ + S + S F+ + ++ +NL++ ++ +++ L P Sbjct: 1 MTLIHRYILKNVFVSCMASVAMFAFLILTMSLVKDMLNLLAEGQLTVGAFFRLTKLLFPF 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 V P F + ++ E+ + G S I L V LAIL + + Sbjct: 61 VFVYALPMGFITGALLTMGRLSAENEITSLRAAGVSVIRLSSSVFLLAILGTTASLVVNF 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 P ++ +Q ++ E F + I + K + Sbjct: 121 YYGPLAKTEYRQELKNTIQTNPLGFIVEKTFVKDFTGSVIYVGKKEAEMLYDVWIWKLNS 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN----- 234 ++Q A+ G + L F++ SA Sbjct: 181 ESQVTTFARAEKGRFAFLENSAELQLDAEGVTIEYRDAEDPENFRTRNFYPASAAKFPFS 240 Query: 235 --------SSTIVLKANDQNLSFLLNPNPNNP-----------NYRPELLETYRSEFHKR 275 T+ K L + L + FHK Sbjct: 241 FSLEKILGKETLARKLTWMTFDELQGEIRKYEGIAATATGAVREEALDNLLKAKMVFHKN 300 Query: 276 LTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY 335 + F I+I K + +++ + I + + +++ I +E P Sbjct: 301 FAMGFAVLSFACIAIPLGLKTS---RKETSANLGIGVGMG-LLYYLAMISIEWLEGRPDL 356 Query: 336 IP--ILYLFLFCISSIFLLMIKK 356 P + ++ S + + Sbjct: 357 RPELLFWIPNLAYQSFGAWLFIR 379 >gi|239815707|ref|YP_002944617.1| permease YjgP/YjgQ family protein [Variovorax paradoxus S110] gi|239802284|gb|ACS19351.1| permease YjgP/YjgQ family protein [Variovorax paradoxus S110] Length = 379 Score = 84.7 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 50/351 (14%), Positives = 128/351 (36%), Gaps = 14/351 (3%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 + + + RSF + + +V I + +++ + L S + + + + + Y + +P + Sbjct: 7 LRKELSRSFGATLVVLVTIVMTMMLIRTLGLASKGSVNPSEVFLVMAYTVLGYMPTILSL 66 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 + L+ M R++E++I ++G ++P+ A + + + + + P S Sbjct: 67 SLFIAIVGTLSRMYRDSEMVIWFSSGRGLADFVEPLFRFAWPVLVLIAVMALLGWPWANS 126 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 + A+ + + F + I K P+ + + + Sbjct: 127 QTIGMRAQYEGRSDIERVTPGEFRESSGRMRVFFIDKDTPDGATATNVFIWAVERGLQIT 186 Query: 187 YYAQSGSIDLDRQAIILNDGEVHRKSPI---SKDISIMKFKSYTLQTESANSSTIVLKAN 243 A+SG I+ L R + + I +F++Y + + + Sbjct: 187 TSARSGRIENVGNNRFLMLSNGQRLERPLLPTAGLKISEFETYGTRAGGTSDFSADNTPA 246 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI-VAADKRALVRQR 302 + L P + ++ E R+ L + F L+++ V++ + R Sbjct: 247 RAKPTLQLLREPGDASHG---------ELAWRIGMLLAAINFVLLALTVSSVNPRVGRSG 297 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + +F + + G S+I ++ +L+ + I +LL+ Sbjct: 298 NLLFALFAFVVYYNMLNLGQSWISSGRFSMGSFMLLLHGGVLLIGVAWLLL 348 >gi|114797396|ref|YP_760970.1| YjgP/YjgQ permease [Hyphomonas neptunium ATCC 15444] gi|114737570|gb|ABI75695.1| putative permease, YjgP/YjgQ family [Hyphomonas neptunium ATCC 15444] Length = 373 Score = 84.7 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 49/370 (13%), Positives = 114/370 (30%), Gaps = 18/370 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTV 60 + YILR ++ ++ +I +++++ + +L L++S +P + Sbjct: 5 SRIQRYILRECLSGLVLVLGILLLAILMIDVVEQMRTIGGDVEITLLDALRLSLMKLPMI 64 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + PF T T +NR +EL II +G S + PV+ L + L IF ++ N Sbjct: 65 IEQTLPFALLAATMMAFTRLNRRSELSIIRASGLSAWRFLTPVIVLGVALGIFSSLALNP 124 Query: 121 IEPKCRSTIKQLS-------AKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI 173 + + + + + ++ + + L Sbjct: 125 LAARLSQSFEAERARLLDVGREVVQVAETGVWLRQGDDSSQYVIHARRVEDGGRTLLDVK 184 Query: 174 FIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL----Q 229 I + R + + +D + +LN+G ++ + + + TL Sbjct: 185 IIEEQRLYNGRQPTNDFAFVRRIDAEKAVLNEGFWQLENLVENLPNQAPERRATLAIPTS 244 Query: 230 TESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 ++ N L Y + LI Sbjct: 245 LDAVRLLDEYASPNTVGFWELPR-FIFETRAAGLDTSRYTMRLFTLTATPVLFTAMALIG 303 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF--LFCIS 347 +A L R + + + G+++ F+ + ++ + + Sbjct: 304 ALACL--RLQRLGGTSRLLATGVLAAIGLYF-FTQFSSSLGSTGAAPAVVAAWSPPLFVL 360 Query: 348 SIFLLMIKKK 357 + L I + Sbjct: 361 FVSLAFIAYR 370 >gi|78186598|ref|YP_374641.1| hypothetical protein Plut_0723 [Chlorobium luteolum DSM 273] gi|78166500|gb|ABB23598.1| conserved hypothetical protein [Chlorobium luteolum DSM 273] Length = 442 Score = 84.7 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 51/330 (15%), Positives = 114/330 (34%), Gaps = 23/330 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL+ + F ++ L I+F+ + + L+++ + Sbjct: 1 MKIIDRYILKSLVGPFFLAFLTIMFVLILQFFANFADRFIGRGIDFMSLIELLALQSAWM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + S+ +E+ + +G S L+ PV+ + LLS+ + N+ Sbjct: 61 VGLAAPMAVLIGVVMAFGSLTTTSEMTVFRASGLSLYRLMLPVVIVGFLLSLLVERFNNV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 ++P+ + + L + A + EN F L D I + + ++ I I D+ Sbjct: 121 VQPQVKYKARSLMSDIAKAKPTFGITENAFSPLVDGYSILVQHADEKTGSIGDIIIYDAT 180 Query: 180 DTQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISK--------DISIMKFKSYT 227 + A+ G ID ++L+DG++H D F+S Sbjct: 181 RKDYRSVITAKDGVIDFSADGRYLVMMLSDGQIHEVQVPGHRLYRKMEFDRHRFVFESTG 240 Query: 228 LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPV--IF 285 ++ + ++ + LL+ ++++ + Sbjct: 241 FGFSRSSENRARSGGHELSARELLSVAEEYRQQ--------VEVAERKISMPIDMFEQAI 292 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSIS 315 L++ A VR + + Sbjct: 293 SLVAPSNAVNYPEVRGGSNVRAVTAVAGYI 322 Score = 53.5 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 13/87 (14%), Positives = 29/87 (33%), Gaps = 4/87 (4%) Query: 265 LETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSY 324 Y +E+HK+ +F LI R+ +SL F ++W Sbjct: 343 YNRYMAEYHKKYALAFACFVFVLIGAPLGVLA---RRGGFGIGAVLSLLF-FVLYWVLMI 398 Query: 325 IIHKIEQNPYYIPILYLFLFCISSIFL 351 + + P + +++ + + Sbjct: 399 TGENMAEWGVLPPAVAIWMADVVIAVI 425 >gi|330818020|ref|YP_004361725.1| hypothetical protein bgla_1g31620 [Burkholderia gladioli BSR3] gi|327370413|gb|AEA61769.1| hypothetical protein bgla_1g31620 [Burkholderia gladioli BSR3] Length = 382 Score = 84.7 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 50/377 (13%), Positives = 116/377 (30%), Gaps = 26/377 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + + + G P+ Sbjct: 1 MRLYEKYFARQIYLTFVFVLFAFSGLFFFFDLISELNSVGHGSYNFGYAVLRVGLQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + + L I ++ Sbjct: 61 FYEIIPVATLISAIYVFAQMAANSEFTIFRVSGLATNRALRSLLKIGVPLVIVTYLIGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF---------FRLDDDLYIKISKYNPNNTLQ 171 I P +++ +A + S + ++ ++ + +P++T+ Sbjct: 121 IGPYTDQLSERVRLEALGSSVSSNFQSGVWVKDTLTARDNGEPVTRFVNVGTLSPDSTIS 180 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI---------------SK 216 + I + + +L D + SPI Sbjct: 181 NVRIYEFDSKFQLQNVRIAKSGRYAPPGHWLLTDVTDTQLSPIVPAPNTPKDALNPVYRS 240 Query: 217 DISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRL 276 + M S S +++ ++ L + + + Y ++L Sbjct: 241 EQVSMPQYSLRSDLTPQILSVLLVSPERMSIFNLFR-YIQHLRENQQDTQRYDIALWRKL 299 Query: 277 TQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-Y 335 + ++S+ A I L +SF +F I + P Sbjct: 300 LYPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLFNTLFSHIGTLNTWPAPL 359 Query: 336 IPILYLFLFCISSIFLL 352 L ++ +F L Sbjct: 360 TAALPGLIYLALGLFGL 376 >gi|118602490|ref|YP_903705.1| permease YjgP/YjgQ family protein [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567429|gb|ABL02234.1| permease YjgP/YjgQ family protein [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 371 Score = 84.7 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 49/366 (13%), Positives = 131/366 (35%), Gaps = 27/366 (7%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 Y++R + + + I + + Q++ I S + LL + G + + Sbjct: 16 SILARYLMRNVSVLLSVVFIVISLVVFGNQLVLIIKETSKEGIPIADLLPLVGLNMIRDV 75 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 ++ + ++ + + +E +++++ G + + L I++ IF+FI ++ Sbjct: 76 VLILSLSLLLAIILSVSKLYKASEAIVMNSLGLGDKHFMVFIQPLVIVIVIFIFILTTVV 135 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKY----NPNNTLQGIFIVD 177 P + + +++ FS++++N F ++ + + + I Sbjct: 136 VPWSKQQRGLIMERSENTPEFSFIKKNEFQEFKNNDIVFYASKVSDADNAKEQNMEEIFI 195 Query: 178 SRDTQTHKIYYAQSGS-----IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT-- 230 + + + + + L +G + P +K+ I+ FK Y LQ Sbjct: 196 YTLVNNEPVITLAKQAQKYTNFNTNSVYLRLKNGTRYHGFPSNKNKKILNFKLYDLQIID 255 Query: 231 -ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 + S + V K ++ LL N +EF R++Q L +I ++ Sbjct: 256 GKMQKSISTVTKVESKSTFELLFSNKLTE----------IAEFQWRISQPLSILILSVLG 305 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCIS 347 + + K + + + + + ++ + + ++ L + Sbjct: 306 V---LLGKTSPRSGKNLGVLVGVVMFIVYNNVLLIAKSTLERGESSPIVGLWWVHLVMLL 362 Query: 348 SIFLLM 353 IF+ Sbjct: 363 LIFIFY 368 >gi|238028371|ref|YP_002912602.1| hypothetical protein bglu_1g28320 [Burkholderia glumae BGR1] gi|237877565|gb|ACR29898.1| Hypothetical protein bglu_1g28320 [Burkholderia glumae BGR1] Length = 382 Score = 84.7 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 50/377 (13%), Positives = 114/377 (30%), Gaps = 26/377 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + + P+ Sbjct: 1 MRLYEKYFARQIYLTFIFVLFAFSGLFFFFDLISELNSVGHGAYNFGYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + + L I ++ Sbjct: 61 FYEIIPVATLISAIYVFAQMAANSEFTIFRVSGLATNQALRSLLKIGVPLVIVTYLIGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF---------FRLDDDLYIKISKYNPNNTLQ 171 I P +++ +A + S ++ ++ + +P++T+ Sbjct: 121 IGPYTDQLSERVRLEALGSSVSSNFASGVWVKDTLTARDNGEPVTRFVNVGTLSPDSTIS 180 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDIS------------ 219 + I + + +L D + +PI D Sbjct: 181 NVRIYEFDSKFQLQNVRIAKSGRYAPPGHWLLTDVTDTQLTPIPPDSHAPKDALNPVYRS 240 Query: 220 ---IMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRL 276 M S S +++ ++ L + + +TY ++L Sbjct: 241 EQVSMPQYSLRSDLTPQILSVLLVSPERMSIFNLFR-YIQHLRENQQDTQTYDIALWRKL 299 Query: 277 TQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-Y 335 + ++S+ A I L +SF +F I + P Sbjct: 300 LYPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLFNTLFSHIGTLNTWPAPL 359 Query: 336 IPILYLFLFCISSIFLL 352 L ++ +F L Sbjct: 360 TAALPALIYLALGLFAL 376 >gi|293393093|ref|ZP_06637408.1| inner membrane protein YjgP [Serratia odorifera DSM 4582] gi|291424239|gb|EFE97453.1| inner membrane protein YjgP [Serratia odorifera DSM 4582] Length = 393 Score = 84.3 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 56/356 (15%), Positives = 132/356 (37%), Gaps = 19/356 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + +++ + N++L + +P + Sbjct: 31 IIIRYLVRETLKSQIAILFILLLIFFCQNLVRVLGDAVDGDVPTNLVLSLLALGVPKMAQ 90 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G + TLI + LA+L S+ + I Sbjct: 91 LILPLSLFLGLLMTLGRLYTESEITVMHACGLGKRTLIIAAMVLALLTSLVAAANVFWIG 150 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P S ++ A+A+ + + L E F D + NT +F+ R Sbjct: 151 PWASSHQDEVIAEAKANPSIAGLAEGQFQPSQDGNAVLFVGNVKGNTFNNVFLAQLRPNG 210 Query: 183 THK--IYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + A+ G I+ + Q + L+ G + + +D I F Y + Sbjct: 211 NQRPSVVVAEHGQINQMKDGSQVVTLDKGTRFEGTALLRDFRITDFSDYKAVVGHRAVAM 270 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +A ++ L + R+EFH RLT V L++++ Sbjct: 271 DNTQAEQMSMLTLWQSDDQEA----------RAEFHWRLTL---VVSVVLMALLVVPLSV 317 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + ++ ++ + ++ + F + + + P+L+++L + + Sbjct: 318 VNPRQGRVLSMLPAILLYLIFFLLQTSLRSNAGK-GKLDPMLWIWLVNAVYFAIAL 372 >gi|297620918|ref|YP_003709055.1| putative permease, YjgP/YjgQ family [Waddlia chondrophila WSU 86-1044] gi|297376219|gb|ADI38049.1| putative permease, YjgP/YjgQ family [Waddlia chondrophila WSU 86-1044] Length = 371 Score = 84.3 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 44/363 (12%), Positives = 102/363 (28%), Gaps = 11/363 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+L + + + + + L I + + + + + IP +LP Sbjct: 4 IIWRYLLSQYFKVMGLCVAAFIAVLLTSR-LDEIAHFAVLSPTPALAAQFILLQIPYILP 62 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + + ++ ++++ EL + G S + P+LF ++L++ F + + Sbjct: 63 IVIPVSCLISSILLVQRLSKSHELTAFRSCGISLKDFLTPILFSSVLVAFINFYIISELS 122 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + + L + + + + Q Sbjct: 123 TYSHYQTIIWKEELRSTNPLHLLRNKHLMGAKGGFFNSLGDSKLGKNAGEVILALPNKNQ 182 Query: 183 THKIYYAQSGSIDLDRQA---IILNDGEVHRKSPISKDI----SIMKFKSYTLQTESANS 235 + + I D + + P S D + K K+ T Sbjct: 183 SRITLFLAKELISDDNFFEGTDVTMITAMPSGDPDSFDHLLVENAAKTKTLTDDFSQLMK 242 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETY---RSEFHKRLTQWLFPVIFGLISIVA 292 ND L + SE +R + F L+ + Sbjct: 243 QKQWKIGNDYLTMEQLLAKLYEEQANGFSVNDINCCYSEIIRRFSLGFSAFSFTLMGLAF 302 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 + KKI + + + + + I +L + +S+ L Sbjct: 303 GISISRTHSLKKILWVVLLAGGYITTLFIGKSAGQNLSLSLALYTIPHLLIISLSAAVLY 362 Query: 353 MIK 355 + Sbjct: 363 RVN 365 >gi|163853055|ref|YP_001641098.1| permease YjgP/YjgQ family protein [Methylobacterium extorquens PA1] gi|218531865|ref|YP_002422681.1| permease YjgP/YjgQ family protein [Methylobacterium chloromethanicum CM4] gi|240140388|ref|YP_002964867.1| putative permease [Methylobacterium extorquens AM1] gi|254562992|ref|YP_003070087.1| permease [Methylobacterium extorquens DM4] gi|163664660|gb|ABY32027.1| permease YjgP/YjgQ family protein [Methylobacterium extorquens PA1] gi|218524168|gb|ACK84753.1| permease YjgP/YjgQ family protein [Methylobacterium chloromethanicum CM4] gi|240010364|gb|ACS41590.1| putative permease [Methylobacterium extorquens AM1] gi|254270270|emb|CAX26266.1| putative permease [Methylobacterium extorquens DM4] Length = 362 Score = 84.3 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 42/349 (12%), Positives = 97/349 (27%), Gaps = 11/349 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + Y R+ L L + + + + ++ + S ++ +++ Y P V Sbjct: 6 TLGRYFAWRFVRTILGVFLTVFALVYTLDFVELLRRAGDAEGASPGLMAQLALYRTPAVA 65 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 V PF + L ++R EL++ G S ++P F+A+ + + N + Sbjct: 66 ESVLPFAVLFGSMAALLQLSRKLELVVARAAGISAWQFLQPGAFVALAIGALAIGAYNPL 125 Query: 122 EPKCRSTIKQLSAKA---QLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 + ++ AK +D I+ T V Sbjct: 126 SAALKQRSSEIEAKIFAKSTKAGTGKDLWLRQRSIDGQAIIRAETAVEGTTTLAGVTVFQ 185 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 D ++ L L D V + + + + + Sbjct: 186 FDEAGAFAAQLEAARATLHDGWWELRDVRVLTRD---EPPESHEVYLVASTLDPSQIRQR 242 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 L + YR ++ L L + L++ + Sbjct: 243 FTPPESVPFWQLPETIARHERA-GLDATRYRLQYDVLLATPLLYLAMVLVAATVSL--RF 299 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCIS 347 R + +S F ++ + + + P + + + Sbjct: 300 FRFGGVGKLVLGGVSAGFVLYVARQVMEG-LGASGMVAPTVAAWFPAVV 347 >gi|325527103|gb|EGD04518.1| putative permease [Burkholderia sp. TJI49] Length = 382 Score = 84.3 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 43/380 (11%), Positives = 107/380 (28%), Gaps = 27/380 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRLYEKYFARQIYVTFVFILFAFSGLFFFFDLISELNSVGHGNYKFGYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + + L I ++ Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLLKIGVPLVIVTYLIGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF---------FRLDDDLYIKISKYNPNNTLQ 171 + P +++ +A A S + ++ ++ + +P++T+ Sbjct: 121 VGPYADQLSERVRLQALGASVSSNFQSGVWVKDTLAARENGEQVTRFVNVGSLSPDSTIS 180 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPIS---------------K 216 + I + + +L +PI Sbjct: 181 NVRIYEFDSKFQLQNVRIAQKGSYEPPGHWLLKGVTETELTPIKPIAGQPADALNPVYRS 240 Query: 217 DISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRL 276 + S +++ ++ L + + + Y ++L Sbjct: 241 QQVTLPEYRLRSDLTPQILSVLLVSPERMSIINLFR-YIQHLRENQQDTQRYDIALWRKL 299 Query: 277 TQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 + ++S+ A R +F + + + H N + Sbjct: 300 LYPFAVFVMLVLSLPFAYL--HTRAGVVGVKVFGGIMLGMSFQLLNTLFSHIGTLNTWPA 357 Query: 337 PILYLFLFCISSIFLLMIKK 356 P+ I L K Sbjct: 358 PLTAATPGLIYLALGLFALK 377 >gi|189220202|ref|YP_001940842.1| permease [Methylacidiphilum infernorum V4] gi|189187060|gb|ACD84245.1| Predicted permease [Methylacidiphilum infernorum V4] Length = 405 Score = 84.3 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 58/371 (15%), Positives = 124/371 (33%), Gaps = 14/371 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRI-NLVSSSTESLNILLKISGYLIPT 59 M++ ++ + ++ L++ + F + + + +L+ ++ L I +K+ LIP Sbjct: 34 MRTIYKFLFLELFKNSLITTSILTFFLVIANAFRDLSDLLVNNEVPLWISVKLLVSLIPF 93 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 VL P+ + + M+++ EL + + G S ++ PV++ A+L S+ F Sbjct: 94 VLTFTLPWGLLVAVILLFGKMSQDRELTALKSAGISLGAIMAPVIWFALLYSVLSFAINA 153 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 I PK R K++ + L S+ + N D + + Sbjct: 154 YIGPKSRHAFKEIFSDVMLHNPLSFFKSNKTIDQFDGFRLYATNRIGARLEDVYIWETDA 213 Query: 180 DTQTHKIYYAQSGSIDLD----RQAIILNDGEVHRKSPISKDI-------SIMKFKSYTL 228 D + + A I+ D R + L + ++ S Y + Sbjct: 214 DLRPLRSIRASEAEIEPDLAHQRILLTLWNARQEERNVSDPQNVKLVMPGSRATQLPYEI 273 Query: 229 QTESANSSTIVLKANDQNLSFLLNPNP--NNPNYRPELLETYRSEFHKRLTQWLFPVIFG 286 V K+ + + + + +EF KRL L F Sbjct: 274 SLAQLFDRLTVRKSIGLSTLDEIGRSIVAADLFGFTSNPTPVLTEFQKRLAFSLSCFTFV 333 Query: 287 LISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCI 346 L+ A + + + + + + + K P I L +F Sbjct: 334 LVGAPLAIQVQRKETSIGVALSLLIVLSYYVIVLLAEALKAKTNLFPELIIWLPNIIFQS 393 Query: 347 SSIFLLMIKKK 357 +L+ + Sbjct: 394 LGFWLIWRVNR 404 >gi|87121690|ref|ZP_01077577.1| hypothetical protein MED121_19119 [Marinomonas sp. MED121] gi|86162941|gb|EAQ64219.1| hypothetical protein MED121_19119 [Marinomonas sp. MED121] Length = 368 Score = 84.3 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 39/362 (10%), Positives = 112/362 (30%), Gaps = 22/362 (6%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 + + + S + ++ I + + + + + L I G+ IP+ L ++ P Sbjct: 1 MAKEVLVSTMAVSFILLLIIASGRFVSYLGRAAEGKMTFEFLFIILGFHIPSFLQIIIPL 60 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 F + + E+ I+ G S++ L L +A++ ++ + P Sbjct: 61 SFFLALLLAYGRLYIENEMSILFACGISKVKLTFYTLGIALIATLVNASISLWLAPTSEY 120 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI------VDSRDT 181 + A+ F +L+ F + ++ +FI Sbjct: 121 QSQLAKAEQDQLTVFDFLQPGRFQGKGFNTTYVAEITPEEGWMKDVFISNTSKVEGKNIP 180 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 +A+ ++ ++ +G P D I +F +Y + + Sbjct: 181 TQTLASHAEQIQLEGGDTYLVFKNGTRFEGVPGQLDYRITQFDTYAV-LLDEKGELSIED 239 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + + S + + N +E+ R++ + I +I + + Sbjct: 240 PSTKPSSEIWRSDDLNEQ----------AEWQWRISLVIMIPILAIIGTSL---SQVNPR 286 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMIKKKYT 359 + + + ++ + + + + P + ++ + L Sbjct: 287 QGRFFKMLPAILLMILYLGLLIWGRTSLEKGRIPSSFGLWWVHILFGLIAAFLFSLFNEI 346 Query: 360 KI 361 ++ Sbjct: 347 RL 348 >gi|268594204|ref|ZP_06128371.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268595873|ref|ZP_06130040.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|293399673|ref|ZP_06643825.1| hypothetical protein NGNG_01868 [Neisseria gonorrhoeae F62] gi|268547593|gb|EEZ43011.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268549661|gb|EEZ44680.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|291609924|gb|EFF39047.1| hypothetical protein NGNG_01868 [Neisseria gonorrhoeae F62] Length = 384 Score = 84.3 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 43/365 (11%), Positives = 141/365 (38%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ +++ + + + + ++ + Q + + + +++ +L + G+ + + P Sbjct: 15 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTP 74 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ +I + + + + Sbjct: 75 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAILIAVMQLWVI 134 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD---LYIKISKYNPNNTLQGIFIVDSR 179 P ++ + + S +E F L +Y + + ++ +F+ + Sbjct: 135 PWAELRSREYAEILKQKQELSLVEAGEFNNLGKRNGRVYFVETFDTESGIMKNLFLREQD 194 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANSS 236 I +A+ G S++ +++ + L G + +P D + + F+ L + Sbjct: 195 KNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTTPKLI 254 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + + L+ +++E R++ + ++ ++A Sbjct: 255 DPVSHRRTISTAQLI----------GSSNPQHQAELMWRISLTVSVLLLC---LLAVPLS 301 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMI 354 + + I I++ + G + + + + +++ +L + + +L+ Sbjct: 302 YFNPRSGHTYNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFVIAIVLLR 361 Query: 355 KKKYT 359 + Sbjct: 362 VRSMP 366 >gi|240127075|ref|ZP_04739736.1| hypothetical protein NgonS_00198 [Neisseria gonorrhoeae SK-93-1035] gi|268685430|ref|ZP_06152292.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035] gi|268625714|gb|EEZ58114.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035] Length = 371 Score = 84.3 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 43/365 (11%), Positives = 142/365 (38%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ +++ + + + + ++ + Q + ++ + +++ +L + G+ + + P Sbjct: 2 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLDRAADGRVAIDAVLALVGFWVIGMTP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ +I + + + + Sbjct: 62 LLLVLTAFISTLTVLTCYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAILIAVMQLWVI 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD---DLYIKISKYNPNNTLQGIFIVDSR 179 P ++ + + S +E F L +Y + + ++ +F+ + Sbjct: 122 PWAELRSREYAEILKQKQELSLVEAGEFNNLGKRNGRVYFVETFDTESGIMKNLFLREQD 181 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE-SANSS 236 I +A+ G S++ +++ + L G + +P D + + F+ L + Sbjct: 182 KNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTTPKLI 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + + L+ +++E R++ + ++ ++A Sbjct: 242 DPVSHRRTISTAQLI----------GSSNPQHQAELMWRISLTVSVLLLC---LLAVPLS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMI 354 + + I I++ + G + + + + +++ +L + + +L+ Sbjct: 289 YFNPRSGHTYNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFVIAIVLLR 348 Query: 355 KKKYT 359 + Sbjct: 349 VRSMP 353 >gi|296448501|ref|ZP_06890381.1| permease YjgP/YjgQ family protein [Methylosinus trichosporium OB3b] gi|296254000|gb|EFH01147.1| permease YjgP/YjgQ family protein [Methylosinus trichosporium OB3b] Length = 387 Score = 84.3 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 48/364 (13%), Positives = 112/364 (30%), Gaps = 12/364 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y+ R I S + + + +L + + +L PTV+ Sbjct: 3 RLLFTYLARRILFSMAVVQFALSVPVVLSYLLYTLTPAA---IRAGLLAPALIGTTPTVV 59 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + T M+ + ++ S ++ +P + A + + + N+I Sbjct: 60 YITLPMAIGVATALEFARMSSEGMIAVLYALRLSVWSVCRPAIVCAGAMVLIGYGLANLI 119 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD- 180 P ++ + + L LE F+ D+ L + + V Sbjct: 120 APHYAGALQDVINVVRNTLNHRMLEPARFYTFDNGLKTLYLERWETPDIAVNLFVRQLSL 179 Query: 181 -TQTHKIYYAQSGSIDLDRQAIIL--NDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A +IL + G + + S ++ I F Y + S + Sbjct: 180 AKNQEETITAARAEFRRTPSGVILALSHGSIQTRPFDSTEVRIAGFDEYAMALPMQGSES 239 Query: 238 I----VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + + L N + L + +E KR L+++ Sbjct: 240 LPARSWRGVYEMGPLEFL-GNWSVARLDRRLSGEWAAEAAKRFGMPALSFAHTLLAMALV 298 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 V R+ F+ +++ + + + +P Y +L + + + Sbjct: 299 LTFGNVTGRRGASSSFVMIAVPATHIFFLVALETLLRADPRYAILLAALICVEIATAATL 358 Query: 354 IKKK 357 I ++ Sbjct: 359 ISRR 362 >gi|297565836|ref|YP_003684808.1| permease YjgP/YjgQ family protein [Meiothermus silvanus DSM 9946] gi|296850285|gb|ADH63300.1| permease YjgP/YjgQ family protein [Meiothermus silvanus DSM 9946] Length = 378 Score = 84.3 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 50/377 (13%), Positives = 111/377 (29%), Gaps = 31/377 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+LR I F + + +L R V + LL+ G IP + Sbjct: 1 MTRIDRYLLREILPPFFFGIFLYIALIAFSNLLARAQWV--GGVPVTSLLQWIGLQIPFI 58 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 P + + ++R ELL++ G S + + +L A L+ F Sbjct: 59 FTQTLPLATLLGVLIGYSRLSRENELLVMQAGGISVLRTARWILLGAAALAGFSLYLSER 118 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + T D + Y+ + + Sbjct: 119 VVPWANQQTAVVWWDKVATGTSGLGWLTGRDLKIGDYLLLFDSYDNAHQEIVNVRLQQWK 178 Query: 181 TQTHKIYYAQSGSIDLDRQAII-----------LNDGEVHRKSPISKDISIMKFKSYTLQ 229 QT + +A+ G ++ + + L + + + + + + Sbjct: 179 GQTLSVVFAERGRLENYQLKLRGFRLYTLDLAKLPVPDFQSLDEVEQYLPQLVRAQNVSR 238 Query: 230 TESANSSTIVLKANDQ-------------NLSFLLNPNPNNPNYRPELLETYRSEFHKRL 276 A+ + + DQ NP P R H L Sbjct: 239 DPQASLVITLPQNRDQLVANFAGGGFENPYPPSHWWRRLQNPTLTPTEAREARVNLHSAL 298 Query: 277 TQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 L ++ +++ A +RA + ++L ++ + S + + + Sbjct: 299 AVSLANLVILFLALPVAARRASSP----AVALGLALGLTIAYYAVLS-LGKLMALSGLIP 353 Query: 337 PILYLFLFCISSIFLLM 353 L ++ + ++ + Sbjct: 354 AELGVWSANLLAVAVAF 370 >gi|15677420|ref|NP_274576.1| hypothetical protein NMB1570 [Neisseria meningitidis MC58] gi|304387021|ref|ZP_07369276.1| YjgP/YjgQ family permease [Neisseria meningitidis ATCC 13091] gi|7226817|gb|AAF41923.1| conserved hypothetical protein [Neisseria meningitidis MC58] gi|304338893|gb|EFM04992.1| YjgP/YjgQ family permease [Neisseria meningitidis ATCC 13091] gi|316983818|gb|EFV62798.1| conserved hypothetical protein [Neisseria meningitidis H44/76] gi|325140780|gb|EGC63294.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis CU385] gi|325199831|gb|ADY95286.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis H44/76] Length = 371 Score = 84.3 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 41/365 (11%), Positives = 142/365 (38%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ +++ + + + + ++ + Q + + + +++ +L + G+ + + P Sbjct: 2 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ ++ + + + + Sbjct: 62 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWVI 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFF---RLDDDLYIKISKYNPNNTLQGIFIVDSR 179 P ++ + + S +E F + + +Y + + ++ +F+ + Sbjct: 122 PWAELRSREYAEILKQKQELSLVEAGEFNSLGKRNGRVYFVETFDTESGIMKNLFLREQD 181 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANSS 236 I +A+ G S++ +++ + L G + +P D + + F+ L + Sbjct: 182 KNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTTPKLI 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + L+ +++E R++ + ++ ++A Sbjct: 242 DPVSHRRTIPTAQLI----------GSSNPQHQAELMWRISLTVSVLLLC---LLAVPLS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMI 354 + + I I++ + G + + + + +++ +L + + + +L+ Sbjct: 289 YFNPRSGHTYNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFAVALILLR 348 Query: 355 KKKYT 359 + Sbjct: 349 VRSMP 353 >gi|119383652|ref|YP_914708.1| permease YjgP/YjgQ family protein [Paracoccus denitrificans PD1222] gi|119373419|gb|ABL69012.1| permease YjgP/YjgQ family protein [Paracoccus denitrificans PD1222] Length = 373 Score = 84.3 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 50/361 (13%), Positives = 107/361 (29%), Gaps = 20/361 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R R +M I ++I I+++I S L+ +S I Sbjct: 2 ILSTYVARRFLRMLVMIAAIFGAILFLIDIVEQIRRFSDENIGLSGAAGLSLLNITASFY 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + + +++R++EL+ I +G S I ++ A L + N + Sbjct: 62 SILPLITVLAGIALFLNLSRSSELVAIRASGRSGIRVLAAPAVTAALAGMLAVAVLNPVV 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD--------------DLYIKISKYNPNN 168 A+ + + + L + I+ S+ +P+ Sbjct: 122 AATTKRYDDAVAQMRSGGGQTVSVGDNAVWLRQALPTRNGNGDETSGQVVIRASRASPDA 181 Query: 169 TLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 T T + + L + A L D + + + + L Sbjct: 182 TTLYDATFMVFAPDTGPTRRIDAATARLTQGAWELTDIKEWPLTQPNPETMARTAPRLEL 241 Query: 229 --QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFG 286 +A + + L + ++ F L + L Sbjct: 242 PTDLTAARIRDSFGRPEAIPVWQL-PAFIKGLERAGFSAQRHKVWFQMELARPLLLAAMI 300 Query: 287 LISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCI 346 +I A +R R+ + + G+F+ + + + N P L + I Sbjct: 301 --AIAAVFTMRHMRGRRMGLLVLGAFGCGIGLFFLRN-LAQVLGDNGGIPPALAGWAPPI 357 Query: 347 S 347 Sbjct: 358 V 358 >gi|254251664|ref|ZP_04944982.1| hypothetical protein BDAG_00856 [Burkholderia dolosa AUO158] gi|124894273|gb|EAY68153.1| hypothetical protein BDAG_00856 [Burkholderia dolosa AUO158] Length = 382 Score = 84.3 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 43/380 (11%), Positives = 107/380 (28%), Gaps = 27/380 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRLYEKYFARQIYVTFVFILFAFSGLFFFFDLISELNSVGHGNYKFGYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + + L I ++ Sbjct: 61 FYEIIPVATLISAIYVFAQMAANSEFTIFRVSGLATNQALRSLLKIGVPLVIVTYLIGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF---------FRLDDDLYIKISKYNPNNTLQ 171 + P +++ +A A S + ++ ++ + +P++T+ Sbjct: 121 VGPYADQLSERVRLQALGASVSSNFQSGVWVKDTLAARENGEHVTRFVNVGSPSPDSTIS 180 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPIS---------------K 216 + I + + +L +PI Sbjct: 181 NVRIYEFDSKFQLRNVRIAQSGRYEPPGHWLLTGVTETELTPIKPVAGQPADALSPVYRS 240 Query: 217 DISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRL 276 + S +++ ++ L + + + Y ++L Sbjct: 241 QQVTLPEYRLRSDLTPQILSVLLVSPERMSIVNLFR-YIQHLRENQQDTQRYDIALWRKL 299 Query: 277 TQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 + ++S+ A R +F + + + H N + Sbjct: 300 LYPFAVFVMLVLSLPFAYL--HTRAGVVGVKVFGGIMLGMSFQLLNTLFSHIGTLNTWPA 357 Query: 337 PILYLFLFCISSIFLLMIKK 356 P+ I L K Sbjct: 358 PLTAATPGLIYLALGLFALK 377 >gi|294678215|ref|YP_003578830.1| permease YjgP/YjgQ family protein [Rhodobacter capsulatus SB 1003] gi|294477035|gb|ADE86423.1| permease YjgP/YjgQ family protein [Rhodobacter capsulatus SB 1003] Length = 366 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 42/316 (13%), Positives = 105/316 (33%), Gaps = 12/316 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + LYI R G++FL+ + ++I+++++I + + +L+ ++ +P+ L Sbjct: 2 TLSLYIARRFGQAFLIVAGAFWGVLFLIEMVEQIRRLDPARGALSDAAHLAALSVPSTLY 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + + R++EL++I G S + ++ + +A+L+ + L N I Sbjct: 62 TIFPLVVMLSGVVAFLGLARSSELVVIRAAGRSALRMLLAPVTVALLIGVLLVAVGNPIV 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYL------EENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 +++ + + + I + N + T Sbjct: 122 SATSKRAEEIEGQLRAEGRQTVSIGREGLWMRQGTADGGQAVIHAMRGNADATALYQVTF 181 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVH---RKSPISKDISIMKFKSYTLQTESA 233 D + + + S L A +L++ + R + +D + + S + Sbjct: 182 LLFDAKAGPVRRIDAASAWLTPGAWVLSEAKDWPLGRSTNPERDATRAQTISLPSTLTAE 241 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + + + + L + L Q L L++ A Sbjct: 242 SIADSFGAPSAMPIWEL-PGFIRALEAAGFSARRHIVWLQVELAQPLMLAAMVLVA--AG 298 Query: 294 DKRALVRQRKKIHPIF 309 R + Sbjct: 299 FTMRPARFGGTGGRVM 314 >gi|168464639|ref|ZP_02698542.1| putative permease [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195632768|gb|EDX51222.1| putative permease [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 366 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 49/354 (13%), Positives = 128/354 (36%), Gaps = 19/354 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ I ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKTVLVKAAMVLALFTGILAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + + + + + +F+ R Sbjct: 122 PWSSKHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFHDVFLAQIRPKG 181 Query: 183 T--HKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F++Y + Sbjct: 182 NARPSVVVADSGHLTQLRDGSQVVTLNKGTRFEGTALLRDFRITDFQNYQAIIGHQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L N + + R+E H R+T + L+ Sbjct: 242 DPNDTDQMDMRTLWNTDND----------RARAELHWRITLVFTVFMMALM---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + ++ ++ + ++ + F + I + P+++++ + + L Sbjct: 289 VNPRQGRVLSMLPAMLLYLLFFLIQTSIKSNGGK-GKLDPVIWMWAVNLIYLAL 341 >gi|238798772|ref|ZP_04642243.1| Inner membrane protein yjgP [Yersinia mollaretii ATCC 43969] gi|238717404|gb|EEQ09249.1| Inner membrane protein yjgP [Yersinia mollaretii ATCC 43969] Length = 364 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 57/361 (15%), Positives = 126/361 (34%), Gaps = 19/361 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFSQKLVRILGAAVDGEIPTNLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G + +LI L LA+ S ++ + Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGMGKKSLIMAALILALGTSALAAVNTIWLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+ + + L F D +F+ R Sbjct: 122 PWSSKHQDEVLNDARANPSLAALAGGQFKSSTDGNSALFIGNVTGKEFNRVFLAQLRPNG 181 Query: 183 T--HKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q +ILN G + + + +D I F Y Sbjct: 182 NQRPSVVVADSGHMTERPDGSQVVILNKGTRYEGTALLRDFRITDFVDYQAIIGHQEVQQ 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 A + L N + R+EFH RLT + VI L+ A Sbjct: 242 NSNVAEQMTMKQLWRSNEADA----------RAEFHWRLTLIVSVVIMALL---VVPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ ++ + ++ + F S + N P+L+++ + + + +I Sbjct: 289 VNPRQGRVLSMLPAMLLYLIFFLLQSSLRSNAG-NGKLDPLLWMWTVNGTYLAIAVILNL 347 Query: 358 Y 358 + Sbjct: 348 W 348 >gi|261392198|emb|CAX49712.1| conserved hypothetical integral membrane protein [Neisseria meningitidis 8013] Length = 371 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 42/365 (11%), Positives = 141/365 (38%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ +++ + + + + ++ + Q + + + +++ +L + G+ I + P Sbjct: 2 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWIIGMTP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ ++ + + + + Sbjct: 62 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWVI 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFF---RLDDDLYIKISKYNPNNTLQGIFIVDSR 179 P ++ + + S +E F + + +Y + + ++ +F+ + Sbjct: 122 PWAELRSREYAEILKQKQELSLVEAGEFNSLGKRNGRVYFVETFDTESGIMKNLFLREQD 181 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANSS 236 I +A+ G S++ +++ + L G + +P D + + F+ L + Sbjct: 182 KNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTTPKLI 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + L+ +++E R++ + ++ ++A Sbjct: 242 DPVSHRRTIPTAQLI----------GSSNPQHQAELMWRISLTVSVLLLC---LLAVPLS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMI 354 + + I I++ + G + + + + +++ +L + + +L+ Sbjct: 289 YFNPRSGHTYNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFVIAIVLLR 348 Query: 355 KKKYT 359 + Sbjct: 349 VRSMP 353 >gi|238921310|ref|YP_002934825.1| hypothetical protein NT01EI_3454 [Edwardsiella ictaluri 93-146] gi|238870879|gb|ACR70590.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 366 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 54/364 (14%), Positives = 140/364 (38%), Gaps = 19/364 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + V + N++ + G IP + Sbjct: 2 IIIRYLVRETVKSQVAILFILLLIFFCQKMVRILGAVVNGDIPTNLVFSLLGLGIPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA + ++ + Sbjct: 62 LILPLSLFLGLLMTLGRLYTESEITVMHACGLSKAVLVKAAMVLAFITGALALVNAFWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L E F D Y+ + Q +F+ R + Sbjct: 122 PWSSLHSDEVMAEARANPGLASLAEGQFQSSQDGNYVLFVGNVKDKKFQNVFLAQLRPSG 181 Query: 183 --THKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + + Q ++L+ G + + + +D I F Y+ ++ Sbjct: 182 SQRPSVVVADSGHLVEMKDGAQKVVLDSGTRYEGTAMLRDFRITDFVDYSAIIGHKSAML 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 A+ ++ L + ++R+EFH RLT ++ L+ Sbjct: 242 DPNNADQASMEALWH----------SQEPSFRAEFHWRLTLVFSVIVMALM---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ ++ + ++ + F S + ++ P+++++ + L ++ Sbjct: 289 VNPRQGRVLSMLPAMLLYLIFFLLQSSLRSNGGKD-KLDPMIWMWAVNGFYLLLAVVLNL 347 Query: 358 YTKI 361 + I Sbjct: 348 WDTI 351 >gi|161505034|ref|YP_001572145.1| hypothetical protein SARI_03165 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160866381|gb|ABX23004.1| hypothetical protein SARI_03165 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 366 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 49/354 (13%), Positives = 128/354 (36%), Gaps = 19/354 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ I ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMVLALFTGILAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + + + + + +F+ R Sbjct: 122 PWSSKHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFHDVFLAQIRPKG 181 Query: 183 T--HKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F++Y + Sbjct: 182 NARPSVVVADSGHLTQLRDGSQVVTLNKGTRFEGTALLRDFRITDFQNYQAIIGHQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L N + + R+E H R+T + L+ Sbjct: 242 DPNDTDQMDMRTLWNTD----------SDRARAELHWRITLVFTVFMMALM---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + ++ ++ + ++ + F + I + P+++++ + + L Sbjct: 289 VNPRQGRVLSMLPAMLLYLLFFLIQTSIKSNGGK-GKLDPVIWMWTVNLIYLAL 341 >gi|94984156|ref|YP_603520.1| permease YjgP/YjgQ [Deinococcus geothermalis DSM 11300] gi|94554437|gb|ABF44351.1| permease YjgP/YjgQ [Deinococcus geothermalis DSM 11300] Length = 352 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 43/358 (12%), Positives = 107/358 (29%), Gaps = 16/358 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + +LR + R + + + + + ++ + L + G + P L Sbjct: 7 TLTRSVLREVLRWYAAGVALFLILQLTDALSTTVGVLLLYHATPLEALSVFGAIAPDKLN 66 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + ++EL + G S + L+ P+ +L+ + F++ + Sbjct: 67 RSLVLAVPFAVLLTFGRLQGDSELKAMFAAGVSPLRLVWPLAVPFVLVGVLAFVNTGYVV 126 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + + + + ++N F L+ + + + Sbjct: 127 PGGLARWDRAWYTIYGTVPPAPSQDNYTFAPPGALFY-AGRVRNGAESGVAQLDGVLIER 185 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + AQSG D + ++D + R + ++ + ++ A Sbjct: 186 GGETVTAQSGIWDTQARTWTVSDAWITRPGQDPRQVAG-----PLVFPQTDTLRPPQPPA 240 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + L + PE + R P++F L++ V Sbjct: 241 AQVSTPVLRARLAADEYATPEQRRVDEHQLATRYADPCTPIVFALVAGVVGLLLR----- 295 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL----FCISSIFLLMIKK 356 F + + VF+ ++ + P L +L F + + L + Sbjct: 296 -NRAGAFAATLLVILVFYVLWTTAPQLARVGALPPTLAAWLPNIVFFLVAAALAWRLR 352 >gi|325134627|gb|EGC57267.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M13399] Length = 371 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 41/365 (11%), Positives = 142/365 (38%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ +++ + + + + ++ + Q + + + +++ +L + G+ + + P Sbjct: 2 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ ++ + + + + Sbjct: 62 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWVI 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFF---RLDDDLYIKISKYNPNNTLQGIFIVDSR 179 P ++ + + S +E F + + +Y + + ++ +F+ + Sbjct: 122 PWAELRSREYAEILKQKQELSLVEAGGFNSLGKRNGRVYFVETFDTESGIMKNLFLREQD 181 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANSS 236 I +A+ G S++ +++ + L G + +P D + + F+ L + Sbjct: 182 KNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTTPKLI 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + L+ +++E R++ + ++ ++A Sbjct: 242 DPVSHRRTIPTAQLI----------GSSNPQHQAELMWRISLTVSVLLLC---LLAVPLS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMI 354 + + I I++ + G + + + + +++ +L + + + +L+ Sbjct: 289 YFNPRSGHTYNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFAVALILLR 348 Query: 355 KKKYT 359 + Sbjct: 349 VRSMP 353 >gi|317153284|ref|YP_004121332.1| permease YjgP/YjgQ family protein [Desulfovibrio aespoeensis Aspo-2] gi|316943535|gb|ADU62586.1| permease YjgP/YjgQ family protein [Desulfovibrio aespoeensis Aspo-2] Length = 380 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 44/356 (12%), Positives = 100/356 (28%), Gaps = 8/356 (2%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 Y+++ + I + + R++ + +L IP ++ Sbjct: 10 LGRYLIQQNLYLMSICLTVGTCIYLLSDVFDRLDDFIKAGLGAETILFYFFVKIPLIVSQ 69 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 + P F + L + R+ E+L + G S IK L A+ S+ + Sbjct: 70 LMPAIFLLALVLQLGILTRSKEMLALRAGGVSFAWFIKFFLIYAMFWSLGQLAFSQFLGV 129 Query: 124 KC-RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + + +L+FR + + Y + + + + Sbjct: 130 FGEYEANRIWKEDVRKKQLDELTITDLWFRDGPFIVLAREAYPGKSRASDVVVYEFATDN 189 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 I + +D L D + +F S ++ + + Sbjct: 190 QELIRILTAKKAMIDDNGWGLLDVHELDTRTFVSVTRLSQFLSVRQNLKAYAAVELKGDT 249 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 L L +E R+ +H + + F + + + Sbjct: 250 AQLPLLELSRAIEK-LEESGSNVEILRTIWHTKWSY-----AFSIAVMALLALALVTFSE 303 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 I SL + F V +G + + P + +L L ++ + Sbjct: 304 NIYANIGFSLILIF-VQYGVHAVGATAGEQAVLPPFVAAWLGNFVMAALAGMRLAW 358 >gi|254491489|ref|ZP_05104668.1| putative permease, YjgP/YjgQ family [Methylophaga thiooxidans DMS010] gi|224462967|gb|EEF79237.1| putative permease, YjgP/YjgQ family [Methylophaga thiooxydans DMS010] Length = 344 Score = 83.9 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 38/344 (11%), Positives = 119/344 (34%), Gaps = 20/344 (5%) Query: 25 FIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNT 84 I + + + + +++ + G L ++ P + L M+ + Sbjct: 3 LIYISTRFARYLADAAVGNMPADVIFSLLGLSSLGALSILLPIGAFLAVMLTLGRMSSDN 62 Query: 85 ELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSY 144 EL ++ G S +++ V+ + +++ + + + P S +L +A+++ + Sbjct: 63 ELTVMAACGISTSRVMRNVMLFSGTIALMVAVLSLFVVPDVMSDRYELQTRAKMSANTTG 122 Query: 145 LEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYY-----AQSGSIDLDRQ 199 L F D + S+ N + + + + + + Sbjct: 123 LIAGSFKESGDGDWTFYSEGLSANKQFMENVFIEIEGKDKPLIFRSETGHFEIDAVTGNK 182 Query: 200 AIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPN 259 ++L G + + +D +I +F S++L E ++ + + LL Sbjct: 183 FLVLEKGYRYEGNAGDQDFTIAQFASHSLLVEKGDAGEVRERHKAMPTGELLE------- 235 Query: 260 YRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVF 319 +E R + L ++ L+++ A ++ + ++ + Sbjct: 236 ---RGSARDIAEVQWRTSAALMTLLLCLMAMPLA---NAGPRQGRYAGFVPAVLLYIVYS 289 Query: 320 WGFSYIIHKIEQN--PYYIPILYLFLFCISSIFLLMIKKKYTKI 361 + + P + +++ + + + +L+ ++K ++ Sbjct: 290 NLLGVNRAWVAKGDLPTWFGGIWVHVLMLGVLLILLNRQKLRRL 333 >gi|16763279|ref|NP_458896.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29144758|ref|NP_808100.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|62182905|ref|YP_219322.1| putative permease [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161617773|ref|YP_001591738.1| hypothetical protein SPAB_05636 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167551265|ref|ZP_02345020.1| putative permease [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168232819|ref|ZP_02657877.1| putative permease [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168234609|ref|ZP_02659667.1| putative permease [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168244032|ref|ZP_02668964.1| putative permease [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168262478|ref|ZP_02684451.1| putative permease [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168821096|ref|ZP_02833096.1| putative permease [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194445077|ref|YP_002043718.1| putative permease [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194450320|ref|YP_002048502.1| permease [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194468992|ref|ZP_03074976.1| putative permease [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194736994|ref|YP_002117399.1| putative permease [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197250300|ref|YP_002149398.1| putative permease [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197262941|ref|ZP_03163015.1| putative permease [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198242439|ref|YP_002218342.1| putative permease [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200386849|ref|ZP_03213461.1| putative permease [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204927295|ref|ZP_03218497.1| putative permease [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205355210|ref|YP_002229011.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207859604|ref|YP_002246255.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213022334|ref|ZP_03336781.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] gi|213427635|ref|ZP_03360385.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213618569|ref|ZP_03372395.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213650368|ref|ZP_03380421.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|238910634|ref|ZP_04654471.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289824526|ref|ZP_06544085.1| putative permease [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25309681|pir||AF1061 probable inner membrane protein STY4817 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16505587|emb|CAD06939.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29140397|gb|AAO71960.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|62130538|gb|AAX68241.1| putative permease [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161367137|gb|ABX70905.1| hypothetical protein SPAB_05636 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194403740|gb|ACF63962.1| putative permease [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194408624|gb|ACF68843.1| putative permease, YjgP/YjgQ family [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194455356|gb|EDX44195.1| putative permease [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194712496|gb|ACF91717.1| putative permease [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197214003|gb|ACH51400.1| putative permease [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197241196|gb|EDY23816.1| putative permease [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197291917|gb|EDY31267.1| putative permease [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197936955|gb|ACH74288.1| putative permease [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199603947|gb|EDZ02492.1| putative permease [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204323960|gb|EDZ09155.1| putative permease [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205274991|emb|CAR40065.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205323849|gb|EDZ11688.1| putative permease [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205332944|gb|EDZ19708.1| putative permease [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205337037|gb|EDZ23801.1| putative permease [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205342368|gb|EDZ29132.1| putative permease [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205348722|gb|EDZ35353.1| putative permease [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206711407|emb|CAR35786.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|320088910|emb|CBY98668.1| Lipopolysaccharide export system permease protein lptF [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|322615642|gb|EFY12562.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618702|gb|EFY15591.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322621885|gb|EFY18735.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627610|gb|EFY24401.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322630916|gb|EFY27680.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637865|gb|EFY34566.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642323|gb|EFY38929.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322643902|gb|EFY40450.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322651022|gb|EFY47407.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322656725|gb|EFY53013.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659851|gb|EFY56094.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322661938|gb|EFY58154.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322666314|gb|EFY62492.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322672733|gb|EFY68844.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676163|gb|EFY72234.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680647|gb|EFY76685.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684459|gb|EFY80463.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322717408|gb|EFZ08979.1| putative permease [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323194204|gb|EFZ79401.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323197349|gb|EFZ82489.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201533|gb|EFZ86597.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206047|gb|EFZ91009.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213058|gb|EFZ97860.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215429|gb|EGA00173.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323219413|gb|EGA03898.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227717|gb|EGA11871.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323228887|gb|EGA13016.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323236501|gb|EGA20577.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239998|gb|EGA24045.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323241955|gb|EGA25984.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323247896|gb|EGA31833.1| lipopolysaccharide ABC transporter permease LptF [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251466|gb|EGA35337.1| lipopolysaccharide ABC transporter permease LptF [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258168|gb|EGA41845.1| lipopolysaccharide ABC transporter permease LptF [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323263686|gb|EGA47207.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323265718|gb|EGA49214.1| lipopolysaccharide ABC transporter permease LptF [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270162|gb|EGA53610.1| lipopolysaccharide ABC transporter permease LptF [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326630368|gb|EGE36711.1| putative permease [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 366 Score = 83.9 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 49/354 (13%), Positives = 128/354 (36%), Gaps = 19/354 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ I ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMVLALFTGILAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + + + + + +F+ R Sbjct: 122 PWSSKHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFHDVFLAQIRPKG 181 Query: 183 T--HKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F++Y + Sbjct: 182 NARPSVVVADSGHLTQLRDGSQVVTLNKGTRFEGTALLRDFRITDFQNYQAIIGHQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L N + + R+E H R+T + L+ Sbjct: 242 DPNDTDQMDMRTLWNTDND----------RARAELHWRITLVFTVFMMALM---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + ++ ++ + ++ + F + I + P+++++ + + L Sbjct: 289 VNPRQGRVLSMLPAMLLYLLFFLIQTSIKSNGGK-GKLDPVIWMWAVNLIYLAL 341 >gi|16767724|ref|NP_463339.1| permease [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167991268|ref|ZP_02572367.1| putative permease [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|16423044|gb|AAL23298.1| putative permease [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|205330408|gb|EDZ17172.1| putative permease [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|261249567|emb|CBG27434.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267996823|gb|ACY91708.1| putative permease [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301160963|emb|CBW20497.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312915575|dbj|BAJ39549.1| putative permease [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|323132816|gb|ADX20246.1| putative permease [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332991288|gb|AEF10271.1| putative permease [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 366 Score = 83.9 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 49/354 (13%), Positives = 128/354 (36%), Gaps = 19/354 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ I ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMVLALFTGILAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + + + + + +F+ R Sbjct: 122 PWSSKHQDEVLAEAKANPGMAALAQGQFQQATNGNSVLFIESVDGSDFHDVFLAQIRPKG 181 Query: 183 T--HKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F++Y + Sbjct: 182 NARPSVVVADSGHLTQLRDGSQVVTLNKGTRFEGTALLRDFRITDFQNYQAIIGHQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L N + + R+E H R+T + L+ Sbjct: 242 DPNDTDQMDMRTLWNTDND----------RARAELHWRITLVFTVFMMALM---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + ++ ++ + ++ + F + I + P+++++ + + L Sbjct: 289 VNPRQGRVLSMLPAMLLYLLFFLIQTSIKSNGGK-GKLDPVIWMWAVNLIYLAL 341 >gi|325267813|ref|ZP_08134463.1| YjgP/YjgQ family permease [Kingella denitrificans ATCC 33394] gi|324980694|gb|EGC16356.1| YjgP/YjgQ family permease [Kingella denitrificans ATCC 33394] Length = 374 Score = 83.9 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 51/367 (13%), Positives = 136/367 (37%), Gaps = 23/367 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ L+ + + + I+ I Q + + + +++ + + G+ + + P Sbjct: 2 IYQRQFLKETTITAIAVFVVILAILVFTQGITLLGRAAGGNVAIDAVGTLIGFWVLNLAP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ I ++G +KPV+ A+ L + + + + + Sbjct: 62 LLLVLTAYISTLTVLTRYWRDSEMAIWLSSGLGLRQWVKPVMTFALPLMLLIAVLQIFVL 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD---DLYIKISKYNPNNTLQGIFIVDSR 179 P ++ + + S +E+ F L +Y L +F+ + Sbjct: 122 PWAELRSREYAELLKQKQNLSLVEQGKFTELGKKNGRIYFVEQFDAHAGQLNHLFLREIG 181 Query: 180 DTQTHKIYYAQSGSID----LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT-ESAN 234 D +++ +A+SG + ++L++G + + D + FK L T + Sbjct: 182 DDGKNQVIFAESGQFTLEGSDQHRTLVLHNGYRYLGNAGQGDFEQIAFKELRLATNTTPK 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + + N LL +++E R++ + V+ ++I Sbjct: 242 LANPIDHRNTIPTIQLLR----------SKDPVHQAELMWRISLPITVVVLCWLAIPI-- 289 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYI--IHKIEQNPYYIPILYLFLFCISSIFLL 352 + + + +++ +++ K + ++ +L + I +LL Sbjct: 290 -SYFNPRSGNSYHVLVAVGFFLVYQNSLTWVYGAMKSGKISFWPALLSVHGLTILCAWLL 348 Query: 353 MIKKKYT 359 M + Sbjct: 349 MRVRSLP 355 >gi|193212373|ref|YP_001998326.1| permease YjgP/YjgQ family protein [Chlorobaculum parvum NCIB 8327] gi|193085850|gb|ACF11126.1| permease YjgP/YjgQ family protein [Chlorobaculum parvum NCIB 8327] Length = 440 Score = 83.9 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 43/234 (18%), Positives = 83/234 (35%), Gaps = 6/234 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK F+ YIL+ +F + + I+ + + + + + + I+ ++ + Sbjct: 1 MKIFDRYILKTHLGTFFFAFVTIMSVFILSFVTKFLERLIGKGLDFGIIAEVVLLQSAWM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + T + ++EL ++ G S L+ PVL A+ LS+ + N+ Sbjct: 61 VGFAVPMAVLVTTVMAFGVLTNSSELTVMRAGGISIYRLVAPVLLAALALSLMMERYNNV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 + P+ L A L++N F + I + L+ I + D Sbjct: 121 LMPEANYRANALFADITRLKPALGLDKNAFSDMIKGYSIMARDVDNKTGELRDIVLYDRA 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAII----LNDGEVHRKS-PISKDISIMKFKSYTL 228 + A G I+ L DG++H P M F Sbjct: 181 QPDVRTVILAARGKIEFTPDNTHLVLTLEDGQIHELRLPAMDRYRTMSFSKNRY 234 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 36/108 (33%), Gaps = 6/108 (5%) Query: 251 LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFI 310 LN E Y E+HK+ + ++F ++ R+ + Sbjct: 327 LNVQLKQMQQHREDYRKYMIEYHKKYSLAFACLVFAMVGAPLGVMA---RRGGFGAGAAL 383 Query: 311 SLSISFGVFWGFSYIIHKIEQNPYYIPI--LYLFLFCISSIFLLMIKK 356 SL F ++W KI P ++L ++ L M+ + Sbjct: 384 SLFF-FVLYWVLMIGGEKIADQGLLSPAVSVWLPNAILTCAGLFMLYR 430 >gi|13476525|ref|NP_108095.1| hypothetical protein mll7865 [Mesorhizobium loti MAFF303099] gi|14027286|dbj|BAB54240.1| mll7865 [Mesorhizobium loti MAFF303099] Length = 360 Score = 83.9 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 42/354 (11%), Positives = 96/354 (27%), Gaps = 13/354 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + Y + L ++ + ++I + + + + ISG +P ++ Sbjct: 4 TLGRYFFFRYVTITIWFFLGLLALVFLIDFTELSGRTTGLPGFTYGTAVAISGLRMPMIM 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PF L S+NR EL+I + G S + P A+L N + Sbjct: 64 LQTVPFVGLFSAMATLVSLNRRYELVIARSAGVSAWQFLLPCCIGALLFGFVSVGLINPL 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIK----ISKYNPNNTLQGIFIVD 177 S +Q+ + + + + + + + Sbjct: 124 AAHAFSLSEQIETQLRSGKSNTVSADAAPWIRQKTSTGDTIIGARAILNQGLEMSDAVFF 183 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 D Q + + + L L D + R + I + Sbjct: 184 VLDQQGNIVERKDAAHAYLRDGYWELQDVKTFR----NGTIQPSASDRVPTNLKPEFVQE 239 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + L + +F + V LI+ A Sbjct: 240 RLARPETIPFYDL-PGKIEVARSFGLKANAFAMQFDSLVALPFLLVAMTLIA--ATVSMR 296 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 R + I + F ++ S ++ + + ++ + ++F Sbjct: 297 FARMGQSATMILGGVVAGFLLYVV-SVLVKAFGVAGFVPTAIAAWVPVVVAMFF 349 >gi|297624270|ref|YP_003705704.1| permease YjgP/YjgQ family protein [Truepera radiovictrix DSM 17093] gi|297165450|gb|ADI15161.1| permease YjgP/YjgQ family protein [Truepera radiovictrix DSM 17093] Length = 353 Score = 83.9 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 54/360 (15%), Positives = 116/360 (32%), Gaps = 10/360 (2%) Query: 1 MKSFEL--YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIP 58 M L Y+LR +L+ + + + + +L ++ ++ Y +P Sbjct: 1 MSRLRLAGYLLRETAGLYLLGVAAFCLLLSIDTLTVWAGYLIQQNATLGVIARLMLYQLP 60 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 L + P + +++EL G ++L+ P+L +L+S+ ++ Sbjct: 61 LFLHLSLPVAAVFAVLLATGRLAKDSELKAAYALGVPPLSLLWPLLGFGVLISVAALLNN 120 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-D 177 +EP+ + +L A A + + ++ FR + LY + Sbjct: 121 GYLEPRGQIAEDELVASFFNARPSAETQRDVSFRQEGGLYYAARIRADTFDRTRAELSGV 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 +Y A G+ D + L + EV R + + + TL + Sbjct: 181 LVYGDDGTLYSAPYGTWDSEVNTWTLEEVEVLR-----EGEAPRLEPTLTLPFTLQADAG 235 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 L A + L + + H+RL VIF LI+ Sbjct: 236 ASLSAAENLTLSELYARIEAGRRAGQSVRGDLFNLHRRLADASSAVIFVLIAGALGLHLR 295 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + L F ++ + +P L + + L +++ + Sbjct: 296 --GRSAGFGWTIVLLVCFFALWTLSESFFEQGVLSPVVAAWLTTGVVGLIGGALALVRLR 353 >gi|56416250|ref|YP_153325.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197365173|ref|YP_002144810.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56130507|gb|AAV80013.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197096650|emb|CAR62265.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 366 Score = 83.9 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 49/354 (13%), Positives = 128/354 (36%), Gaps = 19/354 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ I ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMVLALFTGILAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + + + + + +F+ R Sbjct: 122 PWSSKHQDEVLAEAKATPGMAALAQGQFQQATNGSSVLFIESVDGSDFHDVFLAQIRPKG 181 Query: 183 T--HKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F++Y + Sbjct: 182 NARPSVVVADSGHLTQLRDGSQVVTLNKGTRFEGTALLRDFRITDFQNYQAIIGHQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L N + + R+E H R+T + L+ Sbjct: 242 DPNDTDQMDMRTLWNTDND----------RARAELHWRITLVFTVFMMALM---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + ++ ++ + ++ + F + I + P+++++ + + L Sbjct: 289 VNPRQGRVLSMLPAMLLYLLFFLIQTSIKSNGGK-GKLDPVIWMWAVNLIYLAL 341 >gi|121635227|ref|YP_975472.1| hypothetical protein NMC1490 [Neisseria meningitidis FAM18] gi|254805325|ref|YP_003083546.1| putative permease [Neisseria meningitidis alpha14] gi|120866933|emb|CAM10693.1| conserved integral membrane hypothetical protein [Neisseria meningitidis FAM18] gi|254668867|emb|CBA06967.1| putative permease [Neisseria meningitidis alpha14] gi|254669825|emb|CBA04193.1| conserved hypothetical protein [Neisseria meningitidis alpha153] gi|254672903|emb|CBA07222.1| conserved hypothetical protein [Neisseria meningitidis alpha275] gi|325138630|gb|EGC61189.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis ES14902] gi|325142745|gb|EGC65120.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis 961-5945] gi|325198680|gb|ADY94136.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis G2136] Length = 371 Score = 83.9 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 41/365 (11%), Positives = 141/365 (38%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ +++ + + + + ++ + Q + + + +++ +L + G+ + + P Sbjct: 2 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ ++ + + + + Sbjct: 62 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWVI 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFF---RLDDDLYIKISKYNPNNTLQGIFIVDSR 179 P ++ + + S +E F + + +Y + + ++ +F+ + Sbjct: 122 PWAELRSREYAEILKQKQELSLVEAGEFNSLGKRNGRVYFVETFDTESGIMKNLFLREQD 181 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANSS 236 I +A+ G S++ +++ + L G + +P D + + F+ L + Sbjct: 182 KNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTTPKLI 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + L+ +++E R++ + ++ ++A Sbjct: 242 DPVSHRRTIPTAQLI----------GSSNPQHQAELMWRISLTVSVLLLC---LLAVPLS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMI 354 + + I I++ + G + + + + +++ +L + + +L+ Sbjct: 289 YFNPRSGHTYNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFVIAIVLLR 348 Query: 355 KKKYT 359 + Sbjct: 349 VRSMP 353 >gi|21673570|ref|NP_661635.1| hypothetical protein CT0740 [Chlorobium tepidum TLS] gi|21646682|gb|AAM71977.1| membrane protein, putative [Chlorobium tepidum TLS] Length = 452 Score = 83.9 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 49/265 (18%), Positives = 101/265 (38%), Gaps = 13/265 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK F+ YIL+ +F + + I+F+ + + Q + + I+L++ + Sbjct: 11 MKIFDRYILKEHLGTFFFAFVTIMFVFILTFLTQFLERLIGKGLDFRIILEVVALQSAWM 70 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + T +S+ ++EL ++ G S L+ PVL A+ LS+ + N+ Sbjct: 71 VGLAVPMAVLVSTVMAFSSLTNSSELTVMRAGGISIYRLVAPVLLAALALSLMMERFNNV 130 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 + P+ L A +++N F + I + + L+ I + D Sbjct: 131 LMPEANYKANALFADITRMKPGLGIDKNAFSDVIQGYSIMVRDIDNETGELRDIVLYDRG 190 Query: 180 DTQTHKIYYAQSGSIDLDRQAII----LNDGEVHRKSPISKD--------ISIMKFKSYT 227 + A G I + L DG++H S + D + F + Sbjct: 191 RPDVRTVIMAARGRIQFSQDYSHLVLTLEDGQIHELSLPAMDRYRKMVFARNRYVFDATG 250 Query: 228 LQTESANSSTIVLKANDQNLSFLLN 252 E + + + + + LL+ Sbjct: 251 YGFERTDDGKRRRGSKELSAAELLS 275 Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 17/106 (16%), Positives = 32/106 (30%), Gaps = 6/106 (5%) Query: 253 PNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISL 312 E Y E+HK+ + V+F +I + Sbjct: 341 ERIGQMRENRESFYNYMIEYHKKYSLAFACVVFAMIGAPLGVMA----RHGGFGAGAALS 396 Query: 313 SISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMIKK 356 F ++W KI + +P + +L ++ L MI + Sbjct: 397 LFFFVLYWVLLIGGEKIAERGLLLPAISVWLPNVVLAVTGLFMIYR 442 >gi|145588806|ref|YP_001155403.1| permease YjgP/YjgQ family protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047212|gb|ABP33839.1| permease YjgP/YjgQ family protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 384 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 48/375 (12%), Positives = 120/375 (32%), Gaps = 24/375 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 +E Y+ R I +F +V + IL + V +L + L P+ + Sbjct: 8 IYERYLARQIYAAFGFILFALVALFLFFDILSELGSV-QGQYTLALALLHVLLKAPSRIS 66 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + + V + +E I+ G + + +++ L + + Sbjct: 67 EIIPIAGLIGSIYVFAMLASQSEFTILRIAGLDVKRGLITLGKISLPLIVLTLVMSEWAG 126 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD------------LYIKISKYNPNNTL 170 P + +Q+ KA + S + ++ + Y+ + K +N + Sbjct: 127 PYTEAKSEQIRMKALGSSYSSQFKTGVWVKDRLRDEDGSGPVRPGVRYVNVGKVEKDNEI 186 Query: 171 QGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRK------SPISKDISIMKFK 224 + I + + D + + +LND R P++ S Sbjct: 187 RDIRMYEFNDVYNLLSIRSAVSGHFDETGIWVLNDVTETRFKEIKQTDPLNPVFSAQTLT 246 Query: 225 SYTLQTE---SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLF 281 L E + +++L + ++ L ++ + ++ + F K++ Sbjct: 247 HPILTLESEVTPQILSVLLISPEKMSILSLGRFIDHLQENKQDVQRHSIAFWKKVVYPFT 306 Query: 282 PVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL 341 + +++ A VR +F + + S + + + + L Sbjct: 307 IFVMLALALPFAYL--KVRAGSVGIKVFGGIMLGMSFQLFNSLFSNVGMLSAWPAFMTAL 364 Query: 342 FLFCISSIFLLMIKK 356 + + LM + Sbjct: 365 TPPLLYFLLALMGLR 379 >gi|254436833|ref|ZP_05050327.1| putative permease, YjgP/YjgQ family [Octadecabacter antarcticus 307] gi|198252279|gb|EDY76593.1| putative permease, YjgP/YjgQ family [Octadecabacter antarcticus 307] Length = 364 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 41/338 (12%), Positives = 96/338 (28%), Gaps = 12/338 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y R +F + + +I +++++ SL +L++S +P++L Sbjct: 2 ILHRYFARRFAWTFTATFGGFFVLMLLIDLVEQLRR-YGGEASLGDMLQLSLLKLPSLLY 60 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + T + R++EL++ G S + + L + +++ N + Sbjct: 61 DILPLIMVLATVATFLGLARSSELIVSRAAGRSALRALVAPLIVTVIIGAITIGVFNPLV 120 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFR-----LDDDLYIKISKYNPNNTLQGIFIVD 177 + + + I+ N + T Sbjct: 121 AATSKEFEARKTTLRSDAPSVLAISENGLWLRQGDDNSQTVIRAGGANLDGTQLQDVTFI 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI---SKDISIMKFKSYTLQTESAN 234 H ++ + +L A L D +V +I + Sbjct: 181 RFSKTGHPTRRIEAATANLTIGAWDLTDAKVWPLVGNRVAESVATIHTTLRIPSTLTADE 240 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + + L + ++ L Q F + LI A Sbjct: 241 IRDSFGVPSSIAIWEL-PAFIDRLEVAGFSATRHQVWLQMELAQPAFLLAMVLIG--AGF 297 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN 332 R + + ++ I F +F+ ++ E Sbjct: 298 TMRHQRGGRTGVMVLAAILICFALFFLRNFAQILGENG 335 >gi|311104770|ref|YP_003977623.1| hypothetical protein AXYL_01570 [Achromobacter xylosoxidans A8] gi|310759459|gb|ADP14908.1| hypothetical protein AXYL_01570 [Achromobacter xylosoxidans A8] Length = 367 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 39/362 (10%), Positives = 128/362 (35%), Gaps = 8/362 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ ++ I + ++ + + +++ + + ++++ ++ T Sbjct: 1 MSLFKRSVVSEITSHAGVVFSTLLIVWLSVLLVRLLGEAAGGNIGADVVVVLAALSTITA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP + + +T R +E+++ +G S ++PVL +AI +++ + + Sbjct: 61 LPTILAVSVFIAVLTTVTRNYRESEMVVWFASGLSLADWLRPVLRVAIPVALAVAGLTLV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P I + + + S + F + ++ + + + + Sbjct: 121 AAPWAYRQIGEYHERFEQRSDLSKVTAGQFAESSGGNRVFFAEDPLTPSDELGNVFAREN 180 Query: 181 TQTHKIYYAQSGS----IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 S + + + ++L +G + P + +I ++ F Y L+ ES + Sbjct: 181 GPEWLSVLTASKAHSETMPNGDRFLVLGEGHRYDLKPGTPEIRLVHFDKYGLRLESKSGG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V +A + + P + + S+ R++ L + L++I Sbjct: 241 DPVAEA--RANAERSAKARTTPQLIADNTNSSWSQVMWRISLPLAALNLALLAIPLGAVN 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + + + + + I + + ++ ++++ + ++ + Sbjct: 299 PRLGRSGDLLIAGLVGLLYMNLINLSRAWISNGKLSFGL--GVWAIHAAVAALTVFLLMR 356 Query: 357 KY 358 + Sbjct: 357 RL 358 >gi|238755186|ref|ZP_04616532.1| Inner membrane protein yjgP [Yersinia ruckeri ATCC 29473] gi|238706633|gb|EEP99004.1| Inner membrane protein yjgP [Yersinia ruckeri ATCC 29473] Length = 364 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 48/364 (13%), Positives = 129/364 (35%), Gaps = 19/364 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFSQKLVRVLGAAVDGEIPTNLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ G + LI L L++L S ++ + Sbjct: 62 LILPLSLFLGLLMTYGKLYTESEITVMHACGLGKRPLIIAALILSMLTSGLAAVNAIWLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+ + + L E F D + Q +F+ R + Sbjct: 122 PWSSKHQDEVLNDARANPSLAALVEGQFQSSQDGNAVLFVGSVSGKEFQRVFLAQLRPSD 181 Query: 183 THK-----IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + Q ++LN G + + + +D I F Y + Sbjct: 182 NQRPSVVVADKGHMAERPDGSQVVLLNQGTRYEGTALLRDFRITDFTDYQAVIGHQVAQQ 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +++ L + + + R+EFH RLT + VI ++ Sbjct: 242 DNNIVEQMSMAALWHSSEQDA----------RAEFHWRLTLIVSVVIMAML---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ ++ + ++ + F S + + P++++++ + + L ++ Sbjct: 289 VNPRQGRVLSMLPAMLLYLIFFLLQSSLRSNGAK-GKLDPMVWIWVVNGAYLALALVLNL 347 Query: 358 YTKI 361 + + Sbjct: 348 WDSL 351 >gi|213963082|ref|ZP_03391340.1| permease YjgP/YjgQ family protein [Capnocytophaga sputigena Capno] gi|213954166|gb|EEB65490.1| permease YjgP/YjgQ family protein [Capnocytophaga sputigena Capno] Length = 508 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 51/297 (17%), Positives = 113/297 (38%), Gaps = 22/297 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI+ ++FL + ++ I I I+ ++ L I+ K Y IP + Sbjct: 1 MKIIDRYIITQFLKNFLGALSILILIFVFHTIFTYIDELAGRGLELWIIFKFLIYFIPQL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P++ P + + S + E + +G S + +++P++ L LLSI F N Sbjct: 61 IPIIMPLAVVIASIMTFGSFAESYEFAAMKASGISLMRVMRPLIILMALLSIGTFFLANN 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + L + + E +F + +D+ IK+ K + +N ++ + Sbjct: 121 VIPVAYREVYTLRSNIAKVKPAMAIAEGVFSNIGEDISIKVGKKSGDNDQFLESVLIHKK 180 Query: 181 TQTHKIYYA--------QSGSIDLDRQAIILNDGEVHRKSPISKDISI-------MKFKS 225 T +S + + +IL DG + + + + FK Sbjct: 181 TPDRVNRTVINAKRGELKSAKSNPNFLQLILEDGTYYEDIKTNTYETQQKMPFAKVHFKK 240 Query: 226 YTLQTESANSSTIVLK-------ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKR 275 Y + + ++ + + N++ L + + + + Y + +R Sbjct: 241 YVINLDLSHLNNVDFNEKSDATTYRMMNVNQLDYAIDSLRSDFKQNITDYGNNMFRR 297 Score = 38.8 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 11/95 (11%), Positives = 33/95 (34%), Gaps = 4/95 (4%) Query: 255 PNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSI 314 ++ YR +L+ + + + + ++ +R+ P+ + I Sbjct: 363 QSDLEYRYKLMNLHIMNLSDKFALTIACFVLFFVAAPLGAL---IRKGGIGLPLVFA-MI 418 Query: 315 SFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 F ++ + I +N P L ++ + + Sbjct: 419 LFLSYYFIGMFMKNIAENNTINPALAPWIPALILM 453 >gi|218768538|ref|YP_002343050.1| conserved integral membrane hypothetical protein [Neisseria meningitidis Z2491] gi|121052546|emb|CAM08886.1| conserved integral membrane hypothetical protein [Neisseria meningitidis Z2491] gi|308389704|gb|ADO32024.1| hypothetical protein NMBB_1799 [Neisseria meningitidis alpha710] gi|319410787|emb|CBY91172.1| conserved hypothetical integral membrane protein [Neisseria meningitidis WUE 2594] gi|325128631|gb|EGC51500.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis N1568] gi|325130631|gb|EGC53374.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis OX99.30304] gi|325144870|gb|EGC67158.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M01-240013] gi|325201754|gb|ADY97208.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M01-240149] gi|325204534|gb|ADY99987.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M01-240355] gi|325205695|gb|ADZ01148.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M04-240196] Length = 371 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 41/365 (11%), Positives = 141/365 (38%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ +++ + + + + ++ + Q + + + +++ +L + G+ + + P Sbjct: 2 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ ++ + + + + Sbjct: 62 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWVI 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFF---RLDDDLYIKISKYNPNNTLQGIFIVDSR 179 P ++ + + S +E F + + +Y + + ++ +F+ + Sbjct: 122 PWAELRSREYAEILKQKQELSLVEAGGFNSLGKRNGRVYFVETFDTESGIMKNLFLREQD 181 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANSS 236 I +A+ G S++ +++ + L G + +P D + + F+ L + Sbjct: 182 KNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTTPKLI 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + L+ +++E R++ + ++ ++A Sbjct: 242 DPVSHRRTIPTAQLI----------GSSNPQHQAELMWRISLTVSVLLLC---LLAVPLS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMI 354 + + I I++ + G + + + + +++ +L + + +L+ Sbjct: 289 YFNPRSGHTYNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFVIAIVLLR 348 Query: 355 KKKYT 359 + Sbjct: 349 VRSMP 353 >gi|107023406|ref|YP_621733.1| permease YjgP/YjgQ [Burkholderia cenocepacia AU 1054] gi|105893595|gb|ABF76760.1| permease YjgP/YjgQ [Burkholderia cenocepacia AU 1054] Length = 382 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 43/380 (11%), Positives = 107/380 (28%), Gaps = 27/380 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRLYEKYFARQIYITFVFILFAFSGLFFFFDLISELNSVGHGNYKFGYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + + L I ++ Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLLKIGVPLVIVTYLIGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF---------FRLDDDLYIKISKYNPNNTLQ 171 + P +++ +A A S + ++ ++ + +P++T+ Sbjct: 121 VGPYADQLSERVRLQALGASVSSNFQSGVWVKDTLAARENGEQVTRFVNVGSLSPDSTIS 180 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPIS---------------K 216 + I + + +L +PI Sbjct: 181 NVRIYEFDSKFQLQNVRIAQTGRYEPPGHWLLKGVTETELTPIKPITGQPADALNPVYRS 240 Query: 217 DISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRL 276 + S +++ ++ L + + + Y ++L Sbjct: 241 QQVSLPEYRLHSDLTPQILSVLLVSPERMSIINLFR-YIQHLRENQQDTQRYDIALWRKL 299 Query: 277 TQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 + ++S+ A R +F + + + H N + Sbjct: 300 LYPFAVFVMLVLSLPFAYL--HTRAGVVGVKVFGGIMLGMSFQLLNTLFSHIGTLNTWPA 357 Query: 337 PILYLFLFCISSIFLLMIKK 356 P+ I L K Sbjct: 358 PLTAATPGLIYLALGLFALK 377 >gi|291045045|ref|ZP_06570753.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|291011048|gb|EFE03045.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] Length = 384 Score = 83.5 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 43/365 (11%), Positives = 140/365 (38%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ +++ + + + + ++ + Q + + + +++ +L + G+ + + P Sbjct: 15 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTP 74 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I PV+ A+ +I + + + + Sbjct: 75 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWISPVMQFAVPFAILIAVMQLWVI 134 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD---LYIKISKYNPNNTLQGIFIVDSR 179 P ++ + + S +E F L +Y + + ++ +F+ + Sbjct: 135 PWAELRSREYAEILKQKQELSLVEAGEFNNLGKRNGRVYFVETFDTESGIMKNLFLREQD 194 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANSS 236 I +A+ G S++ +++ + L G + +P D + + F+ L + Sbjct: 195 KNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTTPKLI 254 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + + L+ +++E R++ + ++ ++A Sbjct: 255 DPVSHRRTISTAQLI----------GSSNPQHQAELMWRISLTVSVLLLC---LLAVPLS 301 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMI 354 + + I I++ + G + + + + +++ +L + + +L+ Sbjct: 302 YFNPRSGHTYNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFVIAIVLLR 361 Query: 355 KKKYT 359 + Sbjct: 362 VRSMP 366 >gi|209519257|ref|ZP_03268059.1| permease YjgP/YjgQ family protein [Burkholderia sp. H160] gi|209500337|gb|EEA00391.1| permease YjgP/YjgQ family protein [Burkholderia sp. H160] Length = 382 Score = 83.5 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 43/375 (11%), Positives = 112/375 (29%), Gaps = 25/375 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRIYERYFARQIYLTFVFILFAFSGLFFFFDLINELNSVGHGNYKFQYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + I L I ++ + Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEYTIFRVSGLATNRALRSLLKIGIPLVIVTYLIGEV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRL---------DDDLYIKISKYNPNNTLQ 171 + P +++ +A + + + ++ + ++ + + P+ T+ Sbjct: 121 VGPYTDQLSERVRLEALGSSVSTNFQSGVWVKDTLTERADGEQVTRFVNVGELRPDATIS 180 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRK-----------SPISKDISI 220 + I + +L + ++ Sbjct: 181 NVRIYEFDSKFRLSNVRIAQSGRYQPPGHWLLTGVTDTQLLDVAPAPGTPADALNPVYRA 240 Query: 221 MKFKSYTLQTE---SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLT 277 + + +++L + D+ F L + + + Y ++L Sbjct: 241 TQVTLPEYSLRSELTPQILSVLLVSPDRMSMFNLFRYIQHLTENHQDTQRYEIALWRKLL 300 Query: 278 QWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP 337 + ++S+ A I L +SF +F I + N + P Sbjct: 301 YPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLFNTLFSHIGTL--NTWPAP 358 Query: 338 ILYLFLFCISSIFLL 352 + + + L Sbjct: 359 LTAATPGLVYLVLGL 373 >gi|85709344|ref|ZP_01040409.1| predicted permease [Erythrobacter sp. NAP1] gi|85688054|gb|EAQ28058.1| predicted permease [Erythrobacter sp. NAP1] Length = 417 Score = 83.5 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 53/361 (14%), Positives = 122/361 (33%), Gaps = 11/361 (3%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI R + L + + ++L+ + V+ + ++ K+ G LIP + Sbjct: 8 IDRYIFRLVIVPMLGVFALAASLLLLDKMLRLFDFVAVEGGPIGVVFKMLGALIPEYASL 67 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + + ++EL + G S L++ + ++L I+P Sbjct: 68 AIPLGLLLGVLLAFRKLATSSELDTMRAVGLSYWRLLRVPYAITLVLVAVNIALVFYIQP 127 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTL-QGIFIVDSRDTQ 182 R +Q+ + + + ++ F L D + ++I + + GIF S Sbjct: 128 VSRYYYEQMEYELRSGALGASIKVGEFTTLADRMALRIERSEDDGQRLIGIFARVSNSRD 187 Query: 183 THKIYYAQSGSID---LDRQAIILNDGEVHRK-SPISKDISIMKFKSYTLQTESANSSTI 238 A+ GS D IIL E S+ ++ F + L + Sbjct: 188 QVLSISAREGSFMATTDDPDTIILRLTEGTIVQDTGSETPRVLSFSRHDLPIDLPAVEEF 247 Query: 239 VLK---ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + + + L LL + + + ++ F+ R + + ++ L+++ A Sbjct: 248 RARGEASREYILPELLR-IGWSEQAEEDERDAVQAAFNYRTVEVVMMLLMPLLAVALAIP 306 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + I + + I +P L+ +++ + M Sbjct: 307 PKRSTSALGVFVSIILVVAYHKINQYGEDIAALGRIDPIIA--LWGPFCAFAALIIWMYY 364 Query: 356 K 356 + Sbjct: 365 R 365 >gi|238793061|ref|ZP_04636690.1| Inner membrane protein yjgP [Yersinia intermedia ATCC 29909] gi|238727661|gb|EEQ19186.1| Inner membrane protein yjgP [Yersinia intermedia ATCC 29909] Length = 364 Score = 83.5 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 53/354 (14%), Positives = 123/354 (34%), Gaps = 19/354 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFSQKLVRILGAAVDGEIPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G + +LI L LA+ S ++ + Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGMGKKSLIMAALILALFTSALAAVNTIWLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+ + + L F D +F+ R Sbjct: 122 PWSSKHQDEVLNDARANPSLAALAGGQFKSSTDGNSALFIGNVTGREFNRVFLAQLRPNG 181 Query: 183 T--HKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q +ILN G + + + +D I F Y Sbjct: 182 NQRPSVVVADSGHMTERPDGSQVVILNKGTRYEGTALLRDFRITDFVDYQAIIGHQEVQQ 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 A ++ L N + R+EFH RLT + +I L+ Sbjct: 242 NNNVAEQMSMKQLWRANQPDT----------RAEFHWRLTLIVSVIIMALL---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + ++ ++ + ++ + F S + N P +++++ + + + Sbjct: 289 VNPRQGRVLSMLPAMLLYLIFFLLQSSLRSNAG-NGKLDPFIWMWIVNGAYLAV 341 >gi|240122360|ref|ZP_04735316.1| hypothetical protein NgonP_00185 [Neisseria gonorrhoeae PID332] gi|240125094|ref|ZP_04737980.1| hypothetical protein NgonSK_02547 [Neisseria gonorrhoeae SK-92-679] gi|254494457|ref|ZP_05107628.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291] gi|268680947|ref|ZP_06147809.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332] gi|226513497|gb|EEH62842.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291] gi|268621231|gb|EEZ53631.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332] Length = 371 Score = 83.5 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 43/365 (11%), Positives = 141/365 (38%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ +++ + + + + ++ + Q + + + +++ +L + G+ + + P Sbjct: 2 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ +I + + + + Sbjct: 62 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAILIAVMQLWVI 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD---LYIKISKYNPNNTLQGIFIVDSR 179 P ++ + + S +E F L +Y + + ++ +F+ + Sbjct: 122 PWAELRNREYAEILKQKQELSLVEAGEFNNLGKRNGRVYFVETFDTESGIMKNLFLREQD 181 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANSS 236 I +A+ G S++ +++ + L G + +P D + + F+ L + Sbjct: 182 KNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTTPKLI 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + + L+ +++E R++ + ++ ++A Sbjct: 242 DPVSHRRTISTAQLI----------GSSNPQHQAELMWRISLTVSVLLLC---LLAVPLS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMI 354 + + I I++ + G + + + + +++ +L + + +L+ Sbjct: 289 YFNPRSGHTYNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFVIAIVLLR 348 Query: 355 KKKYT 359 + Sbjct: 349 VRSMP 353 >gi|171463872|ref|YP_001797985.1| permease YjgP/YjgQ family protein [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193410|gb|ACB44371.1| permease YjgP/YjgQ family protein [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 386 Score = 83.5 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 58/377 (15%), Positives = 125/377 (33%), Gaps = 24/377 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 +E Y+ + I +F +V + IL + LV T +L + L + P+ + Sbjct: 8 IYERYLAKQIYAAFGFILFALVALFLFFDILSELGLV-QGTYTLPLALLHALLKAPSRIS 66 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + + V + +E I+ G + + ++I L I I Sbjct: 67 EIIPIAGLIGSIYVFAMLASQSEFTILRIAGLDVKRGLIALTKISIPLIALTLIMSEWIG 126 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD------------LYIKISKYNPNNTL 170 P + Q+ KA + S ++ + Y+ + K + +N + Sbjct: 127 PYTEAKSDQIRMKAMGSAYSSQFRTGVWVKDRLRDEDGSGPVRPGVRYVNVGKVDKDNEI 186 Query: 171 QGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRK------SPISKDISIMKFK 224 + I + + DT + + +LND R P++ S F Sbjct: 187 RNIRMYEFDDTYHLLSIRSAVSGQFDETGVWVLNDVTETRFKETKQSDPLNPVFSAQTFT 246 Query: 225 SYTLQTE---SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLF 281 + E + +++L + ++ L ++ + + F K++ Sbjct: 247 RPIVTLESEVTPQILSVLLISPEKMSIMSLGRFISHLRENKQDAHRHSIAFWKKVVYPFT 306 Query: 282 PVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL 341 + +++ A + I L +SF +F + + P I L Sbjct: 307 IFVMLTLALPFAYLKVRAGSVGIKVFGGIMLGMSFQLFNSLFSNVGLLGSWPALITALTP 366 Query: 342 FL--FCISSIFLLMIKK 356 L F ++ L + K Sbjct: 367 PLLYFLLALAGLRWVSK 383 >gi|197105523|ref|YP_002130900.1| hypothetical protein PHZ_c2060 [Phenylobacterium zucineum HLK1] gi|196478943|gb|ACG78471.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1] Length = 351 Score = 83.5 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 36/355 (10%), Positives = 100/355 (28%), Gaps = 13/355 (3%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 LY+ R L + +V I ++ +L + + + +P ++ Sbjct: 3 LGLYLFRLAFGRILAALAVLVGILQILDLLDVTTEILDRELGAQGVAYYALLRLPRLVEQ 62 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + + + + + +TG S + L A L++ + + P Sbjct: 63 AAPLAVLAGSLFAFAKLAGESAVTAMRSTGISAYRITLLALPAAALVAAAQLVIGMAVAP 122 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + + + +++ D + + + I Sbjct: 123 RTDAALTRWWQ--ATTPREEVKPQDVITFRVGDDIVSARPSADAQRMSEVVIYRRDGAGR 180 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 A ++ D+ A L S + ++T A+ + + Sbjct: 181 LVQRTAADAAVY-DQGAWRLIAPRFEAISEGEVQTGAAESMTWTRSLRPADVRALQSGGS 239 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 + + + Y ++ H+ ++ ++ A AL R Sbjct: 240 TISAAEARRAL--HGGVSVRPKTYYDTQLHRAWAAPAACLV----MLLLAAPAALANFRG 293 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF----LFCISSIFLLMI 354 + + + +F F + ++ +L + +F + L+ Sbjct: 294 GGTTLMVQCLAAGLLFLVFDGAFTALGESGAAPAMLAAWGAPVIFGALGVTALLY 348 >gi|33603373|ref|NP_890933.1| hypothetical protein BB4399 [Bordetella bronchiseptica RB50] gi|33577497|emb|CAE34762.1| putative membrane protein [Bordetella bronchiseptica RB50] Length = 422 Score = 83.5 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 48/371 (12%), Positives = 115/371 (30%), Gaps = 24/371 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M++ Y+ R I RS + L ++ + ++ ++ V S+ L + +PT Sbjct: 31 MRTARRYLAREIYRSCAVVLLALLGLFTFFALVDDLDNVGDK-FSMLALFYMQALALPTR 89 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L + + EL+I+ +G S + L+ + + I L I + Sbjct: 90 LYDLLPIGLLIGAILALAGLAQRNELVILRVSGVSGMRLLGMLWVITIPLMIGATLLSEF 149 Query: 121 IEPKCRSTIKQLSAKAQLA----LTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + P + + S + I I + ++ + + Sbjct: 150 VTPAAEIKSGEADLTFRGKAGGGRLNSGYWFKEPTPQNGTRIINIKTLLADGQVKDVTLY 209 Query: 177 DSRDT-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKS------------PISKDISIMKF 223 + R + ++ A +G +L D R P + K Sbjct: 210 EFRSDLEMTALWTAPNGRFSRGDL--VLTDVSETRIDEHAPSALADAKQPKEPPARVTKV 267 Query: 224 KSYTLQTESANSSTI-VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFP 282 L T + + + ++ + L + + ++L Sbjct: 268 PELKLDTTLSPERLLARVLTPERMSALTLVDYIEYLRHNQLQYDRQVVALWRKLVYPFTL 327 Query: 283 VIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 ++ I+ R+ +FI + + G F + + + + P + Sbjct: 328 LVMITIAAPIGFM--QTRRGGVGAKVFIGILLGVGFF-MLNQLALNVGMLSRWPPWITAL 384 Query: 343 LFCISSIFLLM 353 + ++ L Sbjct: 385 GPNLGALLLAF 395 >gi|260596296|ref|YP_003208867.1| lipopolysaccharide ABC transporter permease LptF [Cronobacter turicensis z3032] gi|260215473|emb|CBA27590.1| Lipopolysaccharide export system permease protein lptF [Cronobacter turicensis z3032] Length = 370 Score = 83.5 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 52/345 (15%), Positives = 127/345 (36%), Gaps = 19/345 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPTNLVLALLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+L I ++ Sbjct: 62 LILPLSLFLALLMTLGRLYTESEITVMHACGLSKAVLVKAAMVLALLTGIIAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + D + + + + +F+ R Sbjct: 122 PWSSRHQDEVLAEAKANPGMAALAQGQFQQATDGNAVLFIESVDGSKFKDVFLAQLRPKG 181 Query: 183 T--HKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I FK Y + Sbjct: 182 NARPSVVVADSGELSQRKDGSQVVTLNQGTRFEGTAMLRDFRITDFKDYQAIIGHQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 A ++ L + + R+EFH RLT ++ L+ Sbjct: 242 DPDDAEQMDMQTLWQADSKSA----------RAEFHWRLTLVFAVIVMALM---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 + ++ ++ + ++ + F + + + P+++++ Sbjct: 289 VNPRQGRVLSMLPAMLLYLIFFLLQTSLRSNGAK-GKLDPLIWMW 332 >gi|311281181|ref|YP_003943412.1| permease YjgP/YjgQ family protein [Enterobacter cloacae SCF1] gi|308750376|gb|ADO50128.1| permease YjgP/YjgQ family protein [Enterobacter cloacae SCF1] Length = 366 Score = 83.1 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 57/354 (16%), Positives = 131/354 (37%), Gaps = 19/354 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGEIPTNLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ I ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILALFTGIVAALNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + D + + + +F+ R Sbjct: 122 PWSSRHQDEVLAEAKANPGMAALAQGQFQQASDGNSVLFIESVDGKKFRDVFLAQIRTKG 181 Query: 183 T--HKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG+I + Q + LN+G + + +D + FK+Y S Sbjct: 182 NARPSVVVADSGNITQQKDGSQVVHLNEGTRFEGTAMLRDFRVTDFKNYQAIIGHQTVSL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 N+ L N + N R+E H RLT I L+ Sbjct: 242 DPSDTEQMNMLTLWNTDTNGA----------RAELHWRLTLVATVFIMALM---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + ++ ++ + ++ + VF+ I + P++++++ + L Sbjct: 289 VNPRQGRVLSMLPAMLLY-LVFFLLQTSIRSNGEKGKLDPMVWMWVVNLLYFAL 341 >gi|295675784|ref|YP_003604308.1| permease YjgP/YjgQ family protein [Burkholderia sp. CCGE1002] gi|295435627|gb|ADG14797.1| permease YjgP/YjgQ family protein [Burkholderia sp. CCGE1002] Length = 382 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 44/375 (11%), Positives = 112/375 (29%), Gaps = 25/375 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRIYERYFARQIYLTFVFILFAFSGLFFFFDLINELNSVGHGNYKFQYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + + L I ++ + Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEYTIFRVSGLATNRALRSLLKIGVPLVIVTYLIGEV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRL---------DDDLYIKISKYNPNNTLQ 171 + P +++ +A + S + ++ + ++ + + P+ T+ Sbjct: 121 VGPYTDQLSERVRLEALGSSVSSNFQSGVWVKDTLTERADGEQVTRFVNVGELRPDATIS 180 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRK-----------SPISKDISI 220 + I + +L + ++ Sbjct: 181 NVRIYEFDSKFRLSNIRIAQSGRYQPPGHWLLTGVTDTQLLDVARAPGTPADALNPVYRA 240 Query: 221 MKFKSYTLQTE---SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLT 277 + + +++L + D+ F L + + + Y K++ Sbjct: 241 NQVTLPEYSLRSELTPQILSVLLVSPDRMSMFNLFRYIQHLTENHQDTQRYEIALWKKVL 300 Query: 278 QWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP 337 + ++S+ A I L +SF +F I + N + P Sbjct: 301 YPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLFNTLFSHIGTL--NTWPAP 358 Query: 338 ILYLFLFCISSIFLL 352 + I + L Sbjct: 359 LTAATPGLIYLVLGL 373 >gi|170697654|ref|ZP_02888742.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria IOP40-10] gi|170137402|gb|EDT05642.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria IOP40-10] Length = 382 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 44/380 (11%), Positives = 107/380 (28%), Gaps = 27/380 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRLYEKYFARQIYVTFVFILFAFSGLFFFFDLISELNSVGHGNYKFGYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + I L I ++ Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLLKIGIPLVIITYMIGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF---------FRLDDDLYIKISKYNPNNTLQ 171 + P +++ +A A S + ++ ++ + +P++T+ Sbjct: 121 VGPYADQLSERVRLQALGASVSSNFQSGVWVKDTLAARENGEQVTRFVNVGNLSPDSTIS 180 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPIS---------------K 216 + I + + +L +PI Sbjct: 181 NVRIYEFDSKFQLQNVRIAQTGRYEPPGHWLLKGVTETELTPIKPISGAPADALNPVYRS 240 Query: 217 DISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRL 276 + S +++ ++ L + + + Y ++L Sbjct: 241 QQVTLPEYRLRSDLTPQILSVLLVSPERMSIINLFR-YIQHLRENQQDTQRYDIALWRKL 299 Query: 277 TQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 + ++S+ A R +F + + + H N + Sbjct: 300 LYPFAVFVMLVLSLPFAYL--HTRAGVVGVKVFGGIMLGMSFQLLNTLFSHIGTLNTWPA 357 Query: 337 PILYLFLFCISSIFLLMIKK 356 P+ I L K Sbjct: 358 PLTAATPGLIYLALGLFALK 377 >gi|294012648|ref|YP_003546108.1| putative permease [Sphingobium japonicum UT26S] gi|292675978|dbj|BAI97496.1| putative permease [Sphingobium japonicum UT26S] Length = 407 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 57/357 (15%), Positives = 126/357 (35%), Gaps = 8/357 (2%) Query: 5 ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 + Y+ R I L + + + + ++L + V++ ++++ ++ ++P L + Sbjct: 6 DRYLARLIALPMLGTLVISAMLLVLDKMLSLFDFVAAEGGPVSVVWRMLANMMPEYLSLG 65 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P + + ++EL ++ G S L++ AI L++ F ++P Sbjct: 66 IPIGLMLGILLAFRKLALSSELDVMRAVGLSYGRLLRVPYMFAIALALLNFGIVGFVQPL 125 Query: 125 CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKY-NPNNTLQGIFIVDSRDTQT 183 R + L + + + ++ F L + ++I + + LQGIF+ Sbjct: 126 SRHAYEALRFELRSGALGASIKVGEFTNLGKRMTLRIERSLDEGRNLQGIFVRAVGKDGQ 185 Query: 184 HKIYYAQSGSI----DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 A G D D L DG + +P K I+ F S+ L + Sbjct: 186 TVAVTAAQGEFLATDDPDTIIFRLRDGVLVNDAPKYKSPRILSFSSHDLPIDLPQIERFR 245 Query: 240 LKANDQN-LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + D+ L ++P +L R+ FH R+ + ++ L ++ A Sbjct: 246 GRDVDREKTIPELVTIGHDPATPEKLRNEIRANFHFRMVEVAMMLLLPLAALAFAIPPKR 305 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + + V + +P L+ + + L M Sbjct: 306 STSALGVFLSIVFIVTYHKVNEYGQGVGSLGRIDPIIA--LWGPFLLFAGLILWMYH 360 >gi|59801587|ref|YP_208299.1| hypothetical protein NGO1228 [Neisseria gonorrhoeae FA 1090] gi|194097861|ref|YP_002000906.1| hypothetical protein NGK_0281 [Neisseria gonorrhoeae NCCP11945] gi|239998342|ref|ZP_04718266.1| hypothetical protein Ngon3_02533 [Neisseria gonorrhoeae 35/02] gi|240014487|ref|ZP_04721400.1| hypothetical protein NgonD_07553 [Neisseria gonorrhoeae DGI18] gi|240016933|ref|ZP_04723473.1| hypothetical protein NgonFA_07151 [Neisseria gonorrhoeae FA6140] gi|240079727|ref|ZP_04724270.1| hypothetical protein NgonF_00199 [Neisseria gonorrhoeae FA19] gi|240117144|ref|ZP_04731206.1| hypothetical protein NgonPID_01570 [Neisseria gonorrhoeae PID1] gi|240121009|ref|ZP_04733971.1| hypothetical protein NgonPI_04421 [Neisseria gonorrhoeae PID24-1] gi|268602832|ref|ZP_06136999.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] gi|59718482|gb|AAW89887.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090] gi|193933151|gb|ACF28975.1| Conserved hypothetical protein [Neisseria gonorrhoeae NCCP11945] gi|268586963|gb|EEZ51639.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] gi|317163631|gb|ADV07172.1| hypothetical protein NGTW08_0198 [Neisseria gonorrhoeae TCDC-NG08107] Length = 371 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 43/365 (11%), Positives = 141/365 (38%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ +++ + + + + ++ + Q + + + +++ +L + G+ + + P Sbjct: 2 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I+PV+ A+ +I + + + + Sbjct: 62 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAILIAVMQLWVI 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD---LYIKISKYNPNNTLQGIFIVDSR 179 P ++ + + S +E F L +Y + + ++ +F+ + Sbjct: 122 PWAELRSREYAEILKQKQELSLVEAGEFNNLGKRNGRVYFVETFDTESGIMKNLFLREQD 181 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANSS 236 I +A+ G S++ +++ + L G + +P D + + F+ L + Sbjct: 182 KNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTTPKLI 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + + L+ +++E R++ + ++ ++A Sbjct: 242 DPVSHRRTISTAQLI----------GSSNPQHQAELMWRISLTVSVLLLC---LLAVPLS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMI 354 + + I I++ + G + + + + +++ +L + + +L+ Sbjct: 289 YFNPRSGHTYNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFVIAIVLLR 348 Query: 355 KKKYT 359 + Sbjct: 349 VRSMP 353 >gi|33598433|ref|NP_886076.1| hypothetical protein BPP3926 [Bordetella parapertussis 12822] gi|33574562|emb|CAE39209.1| putative membrane protein [Bordetella parapertussis] Length = 422 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 47/372 (12%), Positives = 115/372 (30%), Gaps = 26/372 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M++ Y+ R I RS + L ++ + ++ ++ V S+ L + +PT Sbjct: 31 MRTARRYLAREIYRSCAVVLLALLGLFTFFALVDDLDNVGDK-FSMLALFYMQALALPTR 89 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L + + EL+I+ +G S + L+ + + I L I + Sbjct: 90 LYDLLPIGLLIGAILALAGLAQRNELVILRVSGVSGMRLLGMLWVITIPLMIGATLLSEF 149 Query: 121 IEPKCRSTIKQLSAKAQLA----LTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + P + + S + I I + ++ + + Sbjct: 150 VTPAAEIKSGEADLTFRGKAGGGRLNSGYWFKEPTPQNGTRIINIKTLLADGQVKDVTLY 209 Query: 177 DSRDT-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK--------------DISIM 221 + R + ++ A +G +L D R + ++ + Sbjct: 210 EFRSDLEMTALWTAPNGRFSRGDL--VLTDVSETRIDEHAPSALADAKQPKELPARVTKV 267 Query: 222 KFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLF 281 VL + L++ + + ++L Sbjct: 268 PELKLDTTLSPERLLARVLTPERMSALTLVD-YIEYLRHNQLQYDRQVVALWRKLVYPFT 326 Query: 282 PVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL 341 ++ I++ A R+ +FI + + G F + + + + P + Sbjct: 327 LLVM--ITVAAPIGFMQTRRGGVGAKVFIGILLGVGFF-MLNQLALNVGMLSRWPPWITA 383 Query: 342 FLFCISSIFLLM 353 + ++ L Sbjct: 384 LGPNLGALLLAF 395 >gi|116690488|ref|YP_836111.1| permease YjgP/YjgQ family protein [Burkholderia cenocepacia HI2424] gi|170733809|ref|YP_001765756.1| permease YjgP/YjgQ family protein [Burkholderia cenocepacia MC0-3] gi|116648577|gb|ABK09218.1| permease YjgP/YjgQ family protein [Burkholderia cenocepacia HI2424] gi|169817051|gb|ACA91634.1| permease YjgP/YjgQ family protein [Burkholderia cenocepacia MC0-3] Length = 382 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 43/380 (11%), Positives = 107/380 (28%), Gaps = 27/380 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRLYEKYFARQIYITFVFILFAFSGLFFFFDLISELNSVGHGNYKFGYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + + L I ++ Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLLKIGVPLVIVTYLIGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF---------FRLDDDLYIKISKYNPNNTLQ 171 + P +++ +A A S + ++ ++ + +P++T+ Sbjct: 121 VGPYADQLSERVRLQALGASVSSNFQSGVWVKDTLAARENGEQVTRFVNVGSLSPDSTIS 180 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPIS---------------K 216 + I + + +L +PI Sbjct: 181 NVRIYEFDSKFQLQNVRIAQTGRYEPPGHWLLKGVTETELTPIKPITGQPADALNPVYRS 240 Query: 217 DISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRL 276 + S +++ ++ L + + + Y ++L Sbjct: 241 QQVSLPEYRLRSDLTPQILSVLLVSPERMSIINLFR-YIQHLRENQQDTQRYDIALWRKL 299 Query: 277 TQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 + ++S+ A R +F + + + H N + Sbjct: 300 LYPFAVFVMLVLSLPFAYL--HTRAGVVGVKVFGGIMLGMSFQLLNTLFSHIGTLNTWPA 357 Query: 337 PILYLFLFCISSIFLLMIKK 356 P+ I L K Sbjct: 358 PLTAATPGLIYLALGLFALK 377 >gi|320335464|ref|YP_004172175.1| permease YjgP/YjgQ family protein [Deinococcus maricopensis DSM 21211] gi|319756753|gb|ADV68510.1| permease YjgP/YjgQ family protein [Deinococcus maricopensis DSM 21211] Length = 379 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 43/383 (11%), Positives = 104/383 (27%), Gaps = 35/383 (9%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + L I + ++L+ G +P L Sbjct: 2 ILTRYVTRELLPPLLAGTALFTAILSFGYFFVSSQWL--KNVPPGLILQWIGAQVPDTLV 59 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 V P + + EL+ + + G S + +P +A L+++ + Sbjct: 60 KVLPMGVVLMVVVAFGRLATERELIAVQSGGISLGRVARPATVIAALVAVLAVWLSLWVA 119 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P+ + L + L + + G+ + Sbjct: 120 PRLNVEARGLYWDTLTGGGLTTLSGRTTDLGGGLTLYLGGYDSATRRMTGVRVQQWDKDN 179 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKS-----PISKDISIMKFKSYTLQTESANSST 237 + + + L D V+R + + + +T Sbjct: 180 AELGTLVFARDGTFENNQLQLRDYAVYRVNFAAVRDLEAVSDDPSKLRSAIGDVFTAVNT 239 Query: 238 IVLKANDQNLSFLLNPNPNNPNY-----------------------RPELLETYRSEFHK 274 K L L+ Y + + R + ++ Sbjct: 240 PPNKDATLTLDTGLSRKETLARYADAIGADSEGWPQLITKLTAPGVKAADRQAARVDLNR 299 Query: 275 RLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY 334 +L + ++ L ++ A + R + I+L I+ + F I P Sbjct: 300 KLALPIGNLVLVLAALPFALR----YGRTLGTSLGIALLIAVAYYLLFFVGIAVANMLPA 355 Query: 335 YIPI-LYLFLFCISSIFLLMIKK 356 + ++L +++ L ++++ Sbjct: 356 LPELGVWLANLVFAALGLTLLRR 378 >gi|300905894|ref|ZP_07123627.1| hypothetical protein HMPREF9536_03886 [Escherichia coli MS 84-1] gi|301304160|ref|ZP_07210276.1| hypothetical protein HMPREF9347_02760 [Escherichia coli MS 124-1] gi|300402363|gb|EFJ85901.1| hypothetical protein HMPREF9536_03886 [Escherichia coli MS 84-1] gi|300840573|gb|EFK68333.1| hypothetical protein HMPREF9347_02760 [Escherichia coli MS 124-1] gi|315256878|gb|EFU36846.1| putative permease [Escherichia coli MS 85-1] Length = 344 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 45/360 (12%), Positives = 119/360 (33%), Gaps = 18/360 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + +L+ + + + + ++ S N + + Sbjct: 181 DLSLESYIYARSATIKDDKTWVLHGVNHKKWLNGKETLETLDNLAWQSAFTSMNLEELSM 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ L N + + + + L+++ Sbjct: 241 PGNTFSVRQL-NHYIHYLQETGQ---------------PILTLAMILLAVPFTFTAPRSP 284 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + + + + + + +++ P+ L L + L + Y + Sbjct: 285 --GMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYWYDR 342 >gi|121591520|ref|ZP_01678785.1| inner membrane protein YjgP [Vibrio cholerae 2740-80] gi|121546628|gb|EAX56818.1| inner membrane protein YjgP [Vibrio cholerae 2740-80] Length = 277 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 43/281 (15%), Positives = 90/281 (32%), Gaps = 15/281 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + ++ + S +++L I G +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASDGEIPTSMILSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LA++ + + + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + L + + L++ F R D + N L +F+ Sbjct: 122 PWSQDKEAHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLYNVFVAQLAPRD 181 Query: 183 THK-----IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + + RQ I L DG + P D I F SY + Sbjct: 182 SILPSVMFSHSGDVKELSDGRQIITLYDGTRYEGVPTRVDYMITNFDSYDGLIGQREVKS 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQ 278 LLN ++E R++ Sbjct: 242 AERDWEALPTLSLLN----------NADRRAQAELQWRISL 272 >gi|254247470|ref|ZP_04940791.1| hypothetical protein BCPG_02268 [Burkholderia cenocepacia PC184] gi|124872246|gb|EAY63962.1| hypothetical protein BCPG_02268 [Burkholderia cenocepacia PC184] Length = 382 Score = 83.1 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 43/380 (11%), Positives = 107/380 (28%), Gaps = 27/380 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRLYEKYFARQIYITFVFILFAFSGLFFFFDLISELNSVGHGNYKFGYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + + L I ++ Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLAANQALRSLLKIGVPLVIVTYLIGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF---------FRLDDDLYIKISKYNPNNTLQ 171 + P +++ +A A S + ++ ++ + +P++T+ Sbjct: 121 VGPYADQLSERVRLQALGASVSSNFQSGVWVKDTLAARENGEQVTRFVNVGSLSPDSTIS 180 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPIS---------------K 216 + I + + +L +PI Sbjct: 181 NVRIYEFDSKFQLQNVRIAQTGRYEPPGHWLLKGVTETELTPIKPITGQPADALNPVYRS 240 Query: 217 DISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRL 276 + S +++ ++ L + + + Y ++L Sbjct: 241 QQVSLPEYRLRSDLTPQILSVLLVSPERMSIINLFR-YIQHLRENQQDTQRYDIALWRKL 299 Query: 277 TQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 + ++S+ A R +F + + + H N + Sbjct: 300 LYPFAVFVMLVLSLPFAYL--HTRAGVVGVKVFGGIMLGMSFQLLNTLFSHIGTLNTWPA 357 Query: 337 PILYLFLFCISSIFLLMIKK 356 P+ I L K Sbjct: 358 PLTAATPGLIYLALGLFALK 377 >gi|307294585|ref|ZP_07574427.1| permease YjgP/YjgQ family protein [Sphingobium chlorophenolicum L-1] gi|306879059|gb|EFN10277.1| permease YjgP/YjgQ family protein [Sphingobium chlorophenolicum L-1] Length = 406 Score = 83.1 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 57/357 (15%), Positives = 127/357 (35%), Gaps = 8/357 (2%) Query: 5 ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 + Y+ R I L + + + + ++L + V++ ++++ ++ ++P L + Sbjct: 6 DRYLARLIALPMLGTLVISAMLLVLDKMLSLFDFVAAEGGPVSVVWRMLANMMPEYLSLG 65 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P + + ++EL ++ G S L++ AI L++ F ++P Sbjct: 66 IPIGLMLGILLAFRKLAMSSELDVMRAVGLSYGRLLRVPYMYAIALALLNFGIVGFVQPL 125 Query: 125 CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKY-NPNNTLQGIFIVDSRDTQT 183 R + L + + + ++ F L + ++I + + LQGIF+ Sbjct: 126 SRHAYEALRFELRSGALGASIKVGEFTNLGKRMTLRIERSLDEGRNLQGIFVRAMGKDGQ 185 Query: 184 HKIYYAQSGSI----DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 A G D D L DG + +P K I+ F S+ L + Sbjct: 186 TVAVTAAQGEFLATDDPDTIIFRLRDGVLVNDAPKYKSPRILSFSSHDLPIDLPQIEKFR 245 Query: 240 LKANDQN-LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + D+ L ++P +L R+ FH R+ + ++ L ++ A Sbjct: 246 GRDVDREKTIPELVMIGHDPGTPDKLRNEIRANFHFRMVEVAMMLLLPLAALAFAIPPKR 305 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + + V + + +P L+ + + L M Sbjct: 306 STSALGVFLSIVFIVTYHKVNEYGQGVGSLGKIDPIIA--LWGPFLLFAGLILWMYH 360 >gi|291060242|gb|ADD72977.1| putative permease, YjgP/YjgQ family [Treponema pallidum subsp. pallidum str. Chicago] Length = 372 Score = 83.1 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 51/355 (14%), Positives = 118/355 (33%), Gaps = 7/355 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK ++Y+L F + + I I IL + S+ + L+KI IP Sbjct: 1 MKILQVYMLDMFLPIFFLVLVCASMILDAIDILVNLTQFISNGYRFSSLVKIWYVSIPHY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P T + + E L I G S +++ P L+I +F +N Sbjct: 61 VLLCCPLSVLFAATYTVRILYVQNEFLAIHFGGLSFFSIVGPWFGFMCFLAIGIFAFDNS 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + +S ++ A+ + + + D + Y+ + +V ++ Sbjct: 121 VVVVSQSKKDEIIARTVSYAQGNSENDVVASSFDGKIISIAGAYHRGQKVLVDMLVIMKN 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + ++ + + +L V+ + K + S+ L+ Sbjct: 181 SNGTIQKLIEAHTAHWQKDRWVLIKPVVYTITHEMKLMVSEYLDSFELREPLELFDHQDF 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 ++ + + Y + F+K+ L I +S + ++ Sbjct: 241 LTKGMSI-QKIKETLHTLKYASKPHRELSIRFYKKFYFPLTMCIMLCLSF---LTGSFLK 296 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQ---NPYYIPILYLFLFCISSIFLL 352 +R I IF S+ ++ + I + +P++ + F ++ Sbjct: 297 KRSLIMYIFCSVVLASAYYVVEMTSIVCAREEYFSPFWGVFFPVLTFLFLIFYVW 351 >gi|170746989|ref|YP_001753249.1| permease YjgP/YjgQ family protein [Methylobacterium radiotolerans JCM 2831] gi|170653511|gb|ACB22566.1| permease YjgP/YjgQ family protein [Methylobacterium radiotolerans JCM 2831] Length = 363 Score = 83.1 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 47/349 (13%), Positives = 108/349 (30%), Gaps = 12/349 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + Y R+ L + + + + + ++ + S ++ ++S Y P V Sbjct: 7 TLGRYFAARFLRTVLGVFVTVFALVYTLDFVELLRRAGEAQGASAGLMAQLSLYRTPAVA 66 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 V PF + L ++R EL++ G S ++P LF+A+ L N + Sbjct: 67 EGVLPFAVLFGSMAALLQLSRKLELVVARAAGISAWQFLQPGLFVALALGALAVGVYNPV 126 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRL---DDDLYIKISKYNPNNTLQGIFIVDS 178 + ++ AK T + ++L+ R D + ++ T V + Sbjct: 127 SAMLKQRSTEIEAKIFAKSTKASSGKDLWIRQKGLDGEAILRAETAVEGTTTLAGVSVFT 186 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 D + L L+D ++ D F +Y + + Sbjct: 187 FDAAGKFAEQLVAARAMLHDGYWELSDVR-----VLTPDAPPESFDTYLIASNLDPGQVR 241 Query: 239 VLKANDQNLSFLLNP-NPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +++ F P YR ++ + + V +++ + Sbjct: 242 QRFTPPESVPFWQLPTTIARTERAGLDATRYRLQYDVLWARPVLFVAMVIVAATVSL--R 299 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCI 346 R + ++ F ++ + P+ F + Sbjct: 300 FFRFGGVGKLVLGGVAAGFALYVVRQVMEGLGASGLVAAPVAAWFPAVV 348 >gi|238760356|ref|ZP_04621497.1| Inner membrane protein yjgP [Yersinia aldovae ATCC 35236] gi|238701416|gb|EEP93992.1| Inner membrane protein yjgP [Yersinia aldovae ATCC 35236] Length = 364 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 52/361 (14%), Positives = 124/361 (34%), Gaps = 19/361 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFSQKLVRILGAAVDGEIPTNLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G + +LI L LAI+ S ++ + Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGMGKKSLIMAALVLAIVTSALAAVNTIWLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + A+ + + L F D +F+ R Sbjct: 122 PWSSKHQDDVLNDARANPSLAALAGGQFKSSTDGNAALFIGNVNGKEFNRVFLAQLRPNG 181 Query: 183 T--HKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A G + Q ++LN G + + + +D I F Y Sbjct: 182 NQRPSVVVADRGHMTERPNGSQVVVLNKGTRYEGTALLRDFRITDFVDYQAIIGHQEVQQ 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L + + R+EFH RLT + +I L+ A Sbjct: 242 NNNVVEQMTMKQLWSSDEPEA----------RAEFHWRLTLIVSVIIMALL---VVPLSA 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ ++ + ++ + F S + N P+++++ + + + +I Sbjct: 289 VNPRQGRVLSMLPAMLLYLIFFLLQSSLRSNAG-NGKLDPLIWMWAVNGTYLAIAVILNL 347 Query: 358 Y 358 + Sbjct: 348 W 348 >gi|283786943|ref|YP_003366808.1| permease [Citrobacter rodentium ICC168] gi|282950397|emb|CBG90045.1| putative permease [Citrobacter rodentium ICC168] Length = 366 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 49/375 (13%), Positives = 136/375 (36%), Gaps = 31/375 (8%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ LIK + LA+ I ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLIKAAMILALFTGIIAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + + + + + + +F+ R Sbjct: 122 PWSSKHQDEVLAEAKANPGMAALAQGQFQQASNGSSVLFIESVDGSDFKDVFLAQIRPKG 181 Query: 183 T--HKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F++Y + Sbjct: 182 NARPSVVVADSGHLTQLRDGSQVVTLNKGTRFEGTALLRDFRITDFQNYQAIIGHQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L + + R+E H R+T + L+ Sbjct: 242 DPNDTDQMDMRTLWTTD----------TDRARAELHWRITLIFTVFMMALM---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM---- 353 + ++ ++ + ++ + F + + + P+++++L + + L + Sbjct: 289 VNPRQGRVLSMLPAMLLYLMFFLIQTSLKSNGGK-GKLDPVIWMWLVNLLYLALAIGLNL 347 Query: 354 --------IKKKYTK 360 ++ ++++ Sbjct: 348 WDTVPVRRLRARFSR 362 >gi|206561016|ref|YP_002231781.1| putative permease [Burkholderia cenocepacia J2315] gi|198037058|emb|CAR52979.1| putative permease protein [Burkholderia cenocepacia J2315] Length = 382 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 43/380 (11%), Positives = 107/380 (28%), Gaps = 27/380 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRLYEKYFARQIYITFIFILFAFSGLFFFFDLISELNSVGHGNYKFGYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + + L I ++ Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLLKIGVPLVIVTYLIGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF---------FRLDDDLYIKISKYNPNNTLQ 171 + P +++ +A A S + ++ ++ + +P++T+ Sbjct: 121 VGPYADQLSERVRLQALGASVSSNFQSGVWVKDTLAARENGEQVTRFVNVGSLSPDSTIS 180 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPIS---------------K 216 + I + + +L +PI Sbjct: 181 NVRIYEFDSKFQLQNVRIAQTGRYEPPGHWLLKGVTETELTPIKPISGQPADALNPVYRS 240 Query: 217 DISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRL 276 + S +++ ++ L + + + Y ++L Sbjct: 241 QQVSLPEYRLRSDLTPQILSVLLVSPERMSIINLFR-YIQHLRENQQDTQRYDIALWRKL 299 Query: 277 TQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 + ++S+ A R +F + + + H N + Sbjct: 300 LYPFAVFVMLVLSLPFAYL--HTRAGVVGVKVFGGIMLGMSFQLLNTLFSHIGTLNTWPA 357 Query: 337 PILYLFLFCISSIFLLMIKK 356 P+ I L K Sbjct: 358 PLTAATPGLIYLALGLFALK 377 >gi|312879634|ref|ZP_07739434.1| permease YjgP/YjgQ family protein [Aminomonas paucivorans DSM 12260] gi|310782925|gb|EFQ23323.1| permease YjgP/YjgQ family protein [Aminomonas paucivorans DSM 12260] Length = 337 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 45/341 (13%), Positives = 113/341 (33%), Gaps = 14/341 (4%) Query: 24 VFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRN 83 + + + + +LV SL +++++ Y +P V+ + P + ++ N Sbjct: 1 MLLVAGNLLFKIADLVIQRGVSLGVVVRLFLYYLPGVVVLTIPMGSLLAALLGFGRLSAN 60 Query: 84 TELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFS 143 E++ + G + +++PV++ ++L+S+ + P L + T Sbjct: 61 VEIVALKAAGVAFQRIVRPVIWASLLVSLGSMALNETLVPLAERAAVNLLRYEVMQETPP 120 Query: 144 YLEENLFFR-----LDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDR 198 +E +F + + + + I + + + + +I A G Sbjct: 121 LFKERIFLKEEKDGHLKRVIYINRMRPRSGKMADILVQEFEEDRLSRIIAAPRGEWVRGE 180 Query: 199 QAIILNDGEVHRKSPISKDISIMKFKSY--TLQTESANSSTIVLKANDQNLSFLLNPNPN 256 + DG+V K + F+ L T L NL + + Sbjct: 181 WW--IEDGKVFEVDAQGKVRLLFTFRKQGLQLHLNPKEVETQSLDPQQMNLFQM-RDSIR 237 Query: 257 NPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISF 316 + R + RL V+ L+ A + ++ + +S+ I F Sbjct: 238 RLEEQGADATRLRVLLNLRLAVPWASVVLALVGAAA---GSRPQRSSSSVGLGLSVVIVF 294 Query: 317 GVFWGFSYIIHKIEQN-PYYIPILYLFLFCISSIFLLMIKK 356 + S+ E + + + + ++++ Sbjct: 295 FYYVTLSFCQSLGEASYLPAVVAAWFPNLIFLVLGGFLVRR 335 >gi|78067268|ref|YP_370037.1| YjgP/YjgQ like transporter [Burkholderia sp. 383] gi|77968013|gb|ABB09393.1| YjgP/YjgQ like transporter [Burkholderia sp. 383] Length = 382 Score = 82.7 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 43/380 (11%), Positives = 107/380 (28%), Gaps = 27/380 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRLYEKYFARQIYVTFVFILFAFSGLFFFFDLISELNSVGHGNYKFGYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + + L I ++ Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLLKIGVPLVIITYLIGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF---------FRLDDDLYIKISKYNPNNTLQ 171 + P +++ +A A S + ++ ++ + +P++T+ Sbjct: 121 VGPYADQLSERVRLQALGASVSSNFQSGVWVKDTLAARENGEQVTRFVNVGSLSPDSTIS 180 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPIS---------------K 216 + I + + +L +PI Sbjct: 181 NVRIYEFDSKFQLRNVRIAQTGRYEPPGHWLLKGVTETELTPIKPISGQPADALNPVYRS 240 Query: 217 DISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRL 276 + S +++ ++ L + + + Y ++L Sbjct: 241 QQVSLPEYRLRSDLTPQILSVLLVSPERMSIINLFR-YIQHLRENQQDTQRYDIALWRKL 299 Query: 277 TQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 + ++S+ A R +F + + + H N + Sbjct: 300 LYPFAVFVMLVLSLPFAYL--HTRAGVVGVKVFGGIMLGMSFQLLNTLFSHIGTLNTWPA 357 Query: 337 PILYLFLFCISSIFLLMIKK 356 P+ I L K Sbjct: 358 PLTAATPGLIYLALGLFALK 377 >gi|157157059|ref|YP_001465770.1| putaitve permease [Escherichia coli E24377A] gi|157079089|gb|ABV18797.1| putaitve permease [Escherichia coli E24377A] Length = 366 Score = 82.7 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 49/361 (13%), Positives = 131/361 (36%), Gaps = 19/361 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ +I ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + + + + + + +F+ R Sbjct: 122 PWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKG 181 Query: 183 T--HKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F+ Y + Sbjct: 182 NARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L N + + R+E + R+T + L+ Sbjct: 242 DPNDTDQMDMRTLWNTDTD----------RARAELNWRITLVFTVFMMALM---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ ++ + ++ + F + + + P L+++ + + L +I Sbjct: 289 VNPRQGRVLSMLPAMLLYLLFFLIQTSLKSNGGK-GKLDPTLWMWTVNLIYLALAIILNL 347 Query: 358 Y 358 + Sbjct: 348 W 348 >gi|62260254|gb|AAX77892.1| unknown protein [synthetic construct] Length = 395 Score = 82.7 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 54/358 (15%), Positives = 120/358 (33%), Gaps = 12/358 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 E Y + I +F LFI+ I +++ S ++ ++K IP + Sbjct: 28 ILEKYYNKDIVNTFTSITLFIISIVSANLLIRLFQEAYSQGLGIDSIVKFVILTIPENVS 87 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + N E+ + G + + ++K L + L+I I+ + Sbjct: 88 LVAPIAIFLAIVICFGKYFANNEMFVTIAGGITWMQIVKNTLKPVVALTIITLITVMYLN 147 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + T+ A S + + + D I I + N ++ Sbjct: 148 PLSKQTLDIYRASLSAKALLSSITDQKIIKAPDGKIIYIGNKSGNTLSDVFLYQNTPQDG 207 Query: 183 THKIYYAQSGSIDLDRQAII--LNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 +K+ A + I D+ A + ++ K+ + + S K + Sbjct: 208 EYKVMTAPTAKIVSDKTAAYIDFMNVNIYTKNSQNSEYSYDNAKKAIYTIFDNSDRDYNH 267 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 D+ L Y++EF R+ + ++ S++A L Sbjct: 268 DRVDR----LYMHTLIENFNDKNNGTAYKAEFLGRINNAISVIVS---SLLALALCRLRP 320 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMIKK 356 ++ K + S+ + ++ + I+ + N + +L + + I+K Sbjct: 321 RQNKYAKLLPSVVV-LAIYLCTNMFINTLMANSSVPVWIGFWLPHIFFTIFAVRTIRK 377 >gi|270265132|ref|ZP_06193395.1| permease YjgP/YjgQ family protein [Serratia odorifera 4Rx13] gi|270041066|gb|EFA14167.1| permease YjgP/YjgQ family protein [Serratia odorifera 4Rx13] Length = 364 Score = 82.7 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 48/356 (13%), Positives = 130/356 (36%), Gaps = 19/356 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + +++ + N++L + +P + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFCQNLVKVLGDAVDGNVPTNLVLSLLALGVPKMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + ++E+ ++ G + TLI + LA++ S ++ Sbjct: 62 LILPLSLFLGLLMTLGRLYTDSEITVMHACGLGKRTLIIAAMVLALITSAVAAVNVFWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + ++A+ + + L E F D + +T +F+ R Sbjct: 122 PVASRYQDVVISEAKANPSIAGLAEGQFKPSQDGNAVLFIGNVKGSTFNDVFLAQLRPNG 181 Query: 183 T--HKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G I+ Q + L+ G + + +D I F Y + Sbjct: 182 NQRPSVVVAERGKINQLKDGSQVVTLDKGTRFEGTALLRDFRITDFNDYKAVVGHRAVAI 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +A ++ L + + R+EFH RLT + +++++ Sbjct: 242 DGNQAEQMSMQALWQSDDPDA----------RAEFHWRLTL---VLSVAIMALLVVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + ++ ++ + ++ + F + + + P+++L++ + + + Sbjct: 289 VNPRQGRVLSMLPAILLYLIFFLLQTSLRSNGGK-GKLDPMIWLWVVNAAYFAIAL 343 >gi|171316729|ref|ZP_02905941.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria MEX-5] gi|171098079|gb|EDT42894.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria MEX-5] Length = 382 Score = 82.7 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 43/380 (11%), Positives = 104/380 (27%), Gaps = 27/380 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRLYEKYFARQIYVTFVFILFAFSGLFFFFDLISELNSVGHGNYKFGYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + I L I ++ Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLLKIGIPLVIITYLIGEF 120 Query: 121 IEPKCRSTIKQLSAKA---------QLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQ 171 + P +++ +A Q + ++ + +P++T+ Sbjct: 121 VGPYADQLSERVRLQALGASVSSNFQSGVWVKDTLAAHENGEQVTRFVNVGNLSPDSTIS 180 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPIS---------------K 216 + I + + +L +PI Sbjct: 181 NVRIYEFDSKFQLQNVRIAQTGRYEPPGHWLLTGVTETELTPIKPISGAPADALNPVYRS 240 Query: 217 DISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRL 276 + S +++ ++ L + + + Y ++L Sbjct: 241 QQVTLPEYRLRSDLTPQILSVLLVSPERMSIINLFR-YIQHLRENQQDTQRYDIALWRKL 299 Query: 277 TQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 + ++S+ A R +F + + + H N + Sbjct: 300 LYPFAVFVMLVLSLPFAYL--HTRAGVVGVKVFGGIMLGMSFQLLNTLFSHIGTLNTWPA 357 Query: 337 PILYLFLFCISSIFLLMIKK 356 P+ I L K Sbjct: 358 PLTAATPGLIYLALGLFALK 377 >gi|46143410|ref|ZP_00135308.2| COG0795: Predicted permeases [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208575|ref|YP_001053800.1| hypothetical protein APL_1103 [Actinobacillus pleuropneumoniae L20] gi|307246019|ref|ZP_07528101.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307248123|ref|ZP_07530151.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307250354|ref|ZP_07532303.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307252738|ref|ZP_07534629.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307255000|ref|ZP_07536818.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307257154|ref|ZP_07538926.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307259436|ref|ZP_07541161.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307261582|ref|ZP_07543250.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307263771|ref|ZP_07545377.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|126097367|gb|ABN74195.1| hypothetical protein APL_1103 [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|306852954|gb|EFM85177.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306855300|gb|EFM87475.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306857629|gb|EFM89736.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306859770|gb|EFM91792.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306861873|gb|EFM93849.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306864316|gb|EFM96227.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306866372|gb|EFM98235.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306868705|gb|EFN00514.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306870892|gb|EFN02630.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 343 Score = 82.7 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 49/338 (14%), Positives = 112/338 (33%), Gaps = 15/338 (4%) Query: 26 IAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTE 85 + + Q++ +N S +++L + G +P + + P + L +E Sbjct: 1 MFFSQQLITVLNSAVSGKVPTDLVLSLLGLGMPALAQFMLPLSLFVALLLTLGRFYAESE 60 Query: 86 LLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYL 145 + ++ G + L K FL+I + + + P + ++ A+A+ FS L Sbjct: 61 ITVMRACGIGKSLLTKVAFFLSIFTTALAVYNVFWLTPWAINKQSEMLAEAKSNPRFSAL 120 Query: 146 EENLFFRLDDDLYIKISKYNPNNTLQGIFIVD--SRDTQTHKIYYAQSGSID---LDRQA 200 F + + N N L I++ + + A+SG + Q Sbjct: 121 SAGQFMTAGGYVLFIENINNEQNKLNDIYVFQPDQQKKNRPSVVVAESGQLQGLPNGDQI 180 Query: 201 IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNY 260 + L + + + D I F SY + + + + L+ Sbjct: 181 LTLENSTRYEGTANVADFRISHFDSYQAYLGYQDVDSNEKLVQRADFNKLM--------- 231 Query: 261 RPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFW 320 + ++E R L + L+++ + + K+ P + I F + Sbjct: 232 -ADQSNEAKAELQWRFALILAVPLMALLAVPMSSVNPRQGRFAKVIPAVLLYLIYFLLQS 290 Query: 321 GFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + + + L F I ++ + K+ Sbjct: 291 SLKSSGASGKLDATLLMPLVSIAFFILAMVMNFWDTKW 328 >gi|307824320|ref|ZP_07654546.1| permease YjgP/YjgQ family protein [Methylobacter tundripaludum SV96] gi|307734700|gb|EFO05551.1| permease YjgP/YjgQ family protein [Methylobacter tundripaludum SV96] Length = 383 Score = 82.7 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 48/339 (14%), Positives = 110/339 (32%), Gaps = 16/339 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + + R+ L IV I Q ++ ++ S L+ + G Sbjct: 23 TVLDKMVALDLLRTLLAVWSVIVVIIVSRQFIRILDRAVEGQVSNQTLMTVLGLKTIIAS 82 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P M VL M R+ E+ + + G T+ + + L LS+ + Sbjct: 83 AAFLPAALFMAVLMVLGRMYRDQEMSAVASAGGGAGTVYRSIFLLVFPLSVLSAGLSFYV 142 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + +++L + + + + F + + ++ V R Sbjct: 143 SPWAEAMMEELMHQDKESADLRGIAAGKFSEYSQGDLVFYVEKIDDDKTMHEVFVQHRQG 202 Query: 182 QTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 I A+ G + D + I+L +GE + P + + + +F Y ++ E+ S+ Sbjct: 203 DRLAIINAEVGRLRDLPDGRYIVLENGERIQGQPGTVNYVLEQFTEYAVRMETKESAANF 262 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 K + + + + N+ +E +R + + L+S +A + Sbjct: 263 GKESVASGTLASSGQIND-----------IAELQRRFSIP---MGIVLLSFIAVPLAQMS 308 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 + + + I F + + Sbjct: 309 PRGGVYGNMLVGFLIYFSYGNFIRVSQSWVMNQTIPAWL 347 >gi|218692648|ref|YP_002400860.1| hypothetical protein ECED1_5114 [Escherichia coli ED1a] gi|218430212|emb|CAR11213.2| conserved hypothetical protein; putative inner membrane protein [Escherichia coli ED1a] gi|324005134|gb|EGB74353.1| putative inner membrane protein [Escherichia coli MS 57-2] Length = 366 Score = 82.7 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 49/361 (13%), Positives = 132/361 (36%), Gaps = 19/361 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ +I ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + + + + + + +F+ R Sbjct: 122 PWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKG 181 Query: 183 T--HKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F+ Y + Sbjct: 182 NARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++S L N + + R+E + R+T + L+ Sbjct: 242 DPNDTDQMDMSTLWNTDTD----------RARAELNWRITLVFTVFMMALM---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ ++ + ++ + F + + + P L+++ + + L ++ Sbjct: 289 VNPRQGRVLSMLPAMLLYLLFFLIQTSLKSNGGK-GKLDPTLWMWTVNLIYLALAIVLNL 347 Query: 358 Y 358 + Sbjct: 348 W 348 >gi|187250532|ref|YP_001875014.1| permease YjgP/YjgQ family protein [Elusimicrobium minutum Pei191] gi|186970692|gb|ACC97677.1| Permease YjgP/YjgQ family protein [Elusimicrobium minutum Pei191] Length = 364 Score = 82.7 bits (202), Expect = 9e-14, Method: Composition-based stats. Identities = 67/361 (18%), Positives = 128/361 (35%), Gaps = 6/361 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 Y+++ + FL + +VFI +++ ++ NL + + + K L+P V Sbjct: 4 NIISKYMIKNLLTFFLGALFVLVFIFFMMHFIKLFNLAMTFGADMLWVFKTLVKLVPDVF 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P F + L +M+ N E++ + G S + KP+ A+ L + +F N I Sbjct: 64 SLCAPMAFQLAVLLTLGNMSENGEIIALRAAGFSFKEITKPLFIFALFLFLVIFSFTNWI 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 PK + + + LE F + D S N + + +++ D+ Sbjct: 124 TPKNTKSFLDARNNVRGRIGKVILEPKTFMEIGDWSLYMESLDPKTNLMSQVRLLNKNDS 183 Query: 182 QTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPIS-KDISIMKFKSYTLQTESANSST 237 + I D + L DG++ R S I FKSY + + Sbjct: 184 ANYTTKINALSGIVNVTSDYVGLKLFDGQMQRVSSEDPSKIMAANFKSYHVTFPLVRAKE 243 Query: 238 IVLKANDQNLSFLL-NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 L+ + L+ + + L ++ +V + + Sbjct: 244 RRLREEEFTTPQLIARIYSGELTDKERAEHKTNVAMRQVLALSPLVLVLLSCPLVFSFGK 303 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + I I LS + G S + K E Y+ P L + I S +L + Sbjct: 304 RANKAWGMLWSIVIVLSFYMLLMAGVS-LGKKYEIAAYFAPFLPIAAGLIVSRYLWKTRL 362 Query: 357 K 357 K Sbjct: 363 K 363 >gi|296114025|ref|YP_003627963.1| putative ABC transporter permease protein YjgP/YjgQ [Moraxella catarrhalis RH4] gi|295921719|gb|ADG62070.1| putative ABC transporter permease protein YjgP/YjgQ [Moraxella catarrhalis RH4] gi|326566094|gb|EGE16251.1| putative ABC transporter permease protein YjgP/YjgQ [Moraxella catarrhalis BC1] gi|326572162|gb|EGE22158.1| putative ABC transporter permease protein YjgP/YjgQ [Moraxella catarrhalis BC7] gi|326573712|gb|EGE23670.1| putative ABC transporter permease protein YjgP/YjgQ [Moraxella catarrhalis O35E] Length = 369 Score = 82.7 bits (202), Expect = 9e-14, Method: Composition-based stats. Identities = 44/373 (11%), Positives = 109/373 (29%), Gaps = 18/373 (4%) Query: 1 MK--SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIP 58 MK Y++R + + + + + V L ++ +S T +L L Y P Sbjct: 1 MKSWILPKYVIRSALLAMAGAVVGLWLVQMVFAYLAELDNISE-TYTLTDALLFILYRSP 59 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 L P + L + ++EL+++ G S ++ + A++ + Sbjct: 60 YFLVQFIPTGTLLGAVIGLGLLANHSELIVMRAAGMSIYRIVSWAMLPAVIFVVISLGVN 119 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 + P + A + D+ + Y N G Sbjct: 120 QFVLPTANQHAAAIRADTIYDKLITIDGYWSVNHDGDNQDVVYISYADNEGGLGEVKRYQ 179 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-----------DISIMKFKSYT 227 + L + ++N + +S + + K T Sbjct: 180 LKDGQLITALKAKSGVYLPQSDDVMNAQKARYTWQLSGIDEIGIGTSQVQQAHSEGKILT 239 Query: 228 LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGL 287 L + + + D +LS L + ++ + F ++L + L Sbjct: 240 LPIAPTDVYLLTKEPEDLSLSSLY-AHRQLMAHQGTRSLRHELAFWQKLLSPFAVLSLVL 298 Query: 288 ISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCIS 347 ++ R + + ++L + ++ L +S Sbjct: 299 VASSFVFGSL--RSQGLGLRVVLALLTGLLFSYLTDLTGFVALATGLSPLLMALVPIVLS 356 Query: 348 SI-FLLMIKKKYT 359 ++ + ++ +K + Sbjct: 357 AMAGMYLLNRKSS 369 >gi|241668815|ref|ZP_04756393.1| hypothetical protein FphipA2_08605 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254877347|ref|ZP_05250057.1| permease [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254843368|gb|EET21782.1| permease [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 360 Score = 82.7 bits (202), Expect = 9e-14, Method: Composition-based stats. Identities = 53/358 (14%), Positives = 120/358 (33%), Gaps = 12/358 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 E Y + I +F LFI+ I +++ S ++ ++K IP + Sbjct: 2 ILEKYYNKDIVNTFTSITLFIISIVSANLLIRLFQQAYSQGLGIDSIIKFVILTIPGNVS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + N E+ + G + + ++K + L+I F++ I Sbjct: 62 LVAPIAIFLAIVICFGKYFANNEMFVTLAGGVTWMQIVKNTMKPVYALTIITFLTVMYIN 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + T A S + ++ + D I I + N + + ++ Sbjct: 122 PLSKQTQDIYQASLTAKALLSSITDDKIIKTTDGKVIYIKSKSGNTLKDVFLYMATDNSD 181 Query: 183 THKIYYAQSGSIDLDRQAII--LNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 +K+ A + D+ A +D ++ K P + + + K+ + Sbjct: 182 EYKVVTAPVAEVITDKGAAYVDFHDAHIYTKEPKTSEYTYDTAKNAIYTIFDTSDRDYNH 241 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 D+ L + R EF R+ + ++ S++A L Sbjct: 242 DKVDR----LYMHTLIENFTDKDDGTVSRGEFFGRINNSISVIVA---SLLALALCRLRP 294 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMIKK 356 ++ K + S+ + V+ + ++ + + +L + I+K Sbjct: 295 RQNKYAKLLPSVVV-LAVYLCSNMFVNTLMTGGKLPVWIGLWLPHIFFIIYAIRTIRK 351 >gi|146313281|ref|YP_001178355.1| permease YjgP/YjgQ family protein [Enterobacter sp. 638] gi|145320157|gb|ABP62304.1| permease YjgP/YjgQ family protein [Enterobacter sp. 638] Length = 366 Score = 82.4 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 52/354 (14%), Positives = 126/354 (35%), Gaps = 19/354 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGEIPTNLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ I ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMVLALFTGIVAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + D + + + +F+ R Sbjct: 122 PWSSKHQDEVLAEAKANPGMAALAQGQFQQASDGSSVLFIESVDGSRFNDVFLAQIRTKG 181 Query: 183 T--HKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F++Y N + Sbjct: 182 NARPSVVVADSGQLAQRKDGSQVVTLNKGTRFEGTALLRDFRITDFQNYQAVVGHQNVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 ++ L+N + R+E H RLT + L+ Sbjct: 242 DPTDTEQMDMRTLINTD----------TNRARAELHWRLTLVFTVFMMALM---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + ++ ++ + ++ + F + I + P+++ + + L Sbjct: 289 VNPRQGRVLSMLPAMLLYLVYFLLQTSIKSNGGK-GKIDPMIWTWAVNGLYLLL 341 >gi|134296647|ref|YP_001120382.1| permease YjgP/YjgQ family protein [Burkholderia vietnamiensis G4] gi|134139804|gb|ABO55547.1| permease YjgP/YjgQ family protein [Burkholderia vietnamiensis G4] Length = 382 Score = 82.4 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 43/380 (11%), Positives = 107/380 (28%), Gaps = 27/380 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRLYEKYFARQIYVTFVFILFAFSGLFFFFDLISELNSVGHGNYKFGYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M ++E I +G + ++ +L + + L I ++ Sbjct: 61 FYEIIPVAALISAIYVFAQMAASSEFTIFRVSGLATNQALRSLLKIGVPLVIITYLIGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF---------FRLDDDLYIKISKYNPNNTLQ 171 + P +++ +A A S + ++ ++ + +P++T+ Sbjct: 121 VGPYADQLSERVRLQALGASVSSNFQSGVWVKDTLAARENGEQVTRFVNVGSLSPDSTIS 180 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPIS---------------K 216 + I + + +L +PI Sbjct: 181 NVRIYEFDSKFQLQNVRIAQTGRYEPPGHWLLKGVTETELTPIKPIAGQPADALNPVYRS 240 Query: 217 DISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRL 276 + S +++ +L L + + + Y ++L Sbjct: 241 QQVSLPEYRLRSDLTPQILSVLLVSPERMSLINLFR-YIQHLRENQQDTQRYDIALWRKL 299 Query: 277 TQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 + ++S+ A R +F + + + H N + Sbjct: 300 LYPFAVFVMLVLSLPFAYL--HTRAGVVGVKVFGGIMLGMSFQLLNTLFSHIGTLNTWPA 357 Query: 337 PILYLFLFCISSIFLLMIKK 356 P+ I L K Sbjct: 358 PLTAATPGLIYLALGLFALK 377 >gi|240116444|ref|ZP_04730506.1| hypothetical protein NgonPID1_09463 [Neisseria gonorrhoeae PID18] gi|260441666|ref|ZP_05795482.1| hypothetical protein NgonDG_11382 [Neisseria gonorrhoeae DGI2] gi|268602116|ref|ZP_06136283.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18] gi|268586247|gb|EEZ50923.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18] Length = 371 Score = 82.4 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 43/365 (11%), Positives = 140/365 (38%), Gaps = 21/365 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ +++ + + + + ++ + Q + + + +++ +L + G+ + + P Sbjct: 2 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMTP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + T VLT R++E+ + + G + I PV+ A+ +I + + + + Sbjct: 62 LLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWISPVMQFAVPFAILIAVMQLWVI 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD---LYIKISKYNPNNTLQGIFIVDSR 179 P ++ + + S +E F L +Y + + ++ +F+ + Sbjct: 122 PWAELRSREYAEILKQKQELSLVEAGEFNNLGKRNGRVYFVETFDTESGIMKNLFLREQD 181 Query: 180 DTQTHKIYYAQSG--SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES-ANSS 236 I +A+ G S++ +++ + L G + +P D + + F+ L + Sbjct: 182 KNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTTPKLI 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V + + L+ +++E R++ + ++ ++A Sbjct: 242 DPVSHRRTISTAQLI----------GSSNPQHQAELMWRISLTVSVLLLC---LLAVPLS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMI 354 + + I I++ + G + + + + +++ +L + + +L+ Sbjct: 289 YFNPRSGHTYNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFVIAIVLLR 348 Query: 355 KKKYT 359 + Sbjct: 349 VRSMP 353 >gi|110598486|ref|ZP_01386757.1| permease YjgP/YjgQ [Chlorobium ferrooxidans DSM 13031] gi|110339936|gb|EAT58440.1| permease YjgP/YjgQ [Chlorobium ferrooxidans DSM 13031] Length = 435 Score = 82.4 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 60/283 (21%), Positives = 109/283 (38%), Gaps = 14/283 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL+ FL + + I+F+ + + + + ++++ + Sbjct: 1 MKIIDRYILKSHVGPFLFAFITILFVLILQFFASFADRFIGRGIAFSAIVELIILQSAWM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + S+ N+E+ ++ +G S L+ PVL +A+LLS+ + NI Sbjct: 61 VGLAAPMAVLIAVVMAFGSLTTNSEMTVLRASGISLYRLMFPVLCVALLLSLCVERFNNI 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 + P K L A L+EN F L D I + + + ++G+ I D Sbjct: 121 VLPLANYHAKSLMVDIARAKPAFGLKENAFSTLVDGYSILVREADDQSKEIRGVVIYDRS 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILN----DGEVHRK-SPISKDISIMKFKSYTLQTESAN 234 + A+ G+I+ L DGE+H+ P + + FK Y ES+ Sbjct: 181 RPNFTTMETAERGTIEFSGDFQYLVMTLLDGEIHQVKQPAHQVYRNLSFKKYRFVFESSG 240 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLT 277 AN + L + EF KR+ Sbjct: 241 FGFARTSANRLRTG--------DSELSARELLSIGDEFQKRIA 275 Score = 51.5 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 41/105 (39%), Gaps = 6/105 (5%) Query: 251 LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFI 310 L+ + + + Y + +HK+ + L +F L+ R+ + Sbjct: 322 LDAERQSISANRSMYNRYMAAYHKKYSLSLACFVFVLVGAPLGVLA---RRGGFGVGAGM 378 Query: 311 SLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--FCISSIFLLM 353 SL F ++W I + P+L ++L IS+I +L+ Sbjct: 379 SLLF-FVLYWMLMISGETIAERGLLDPMLSMWLGNIVISAIGILL 422 >gi|332296606|ref|YP_004438529.1| permease YjgP/YjgQ family protein [Thermodesulfobium narugense DSM 14796] gi|332179709|gb|AEE15398.1| permease YjgP/YjgQ family protein [Thermodesulfobium narugense DSM 14796] Length = 365 Score = 82.4 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 49/356 (13%), Positives = 109/356 (30%), Gaps = 9/356 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K F YIL+ F L + + ++ I LV+ + S K++ +P + Sbjct: 7 KLFWSYILKDFLPFFFFGLLAFSGLMLAGESMRTIKLVADNQGSFLTGAKLAACGLPYSI 66 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + ++ ++ N EL+ + + G S P + + I+ S F + + Sbjct: 67 AFAFPMATLLGVLMAVSRISSNWELVALRSAGLSIFKFSLPFIIIGIIFSTVSFFTFEKL 126 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFF---RLDDDLYIKISKYNPNNTLQGIFIVDS 178 + + AK + + LF +I +K T+ + Sbjct: 127 AYPLLDKSRYIIAKDLKKELNTERQNVLFKLPPDSPQPKFIIFAKDYKPATMSLQDVYIQ 186 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST- 237 S + + + G + S + + F+ + + Sbjct: 187 EFDNEFLKRTIYSSELSFTGNRWVASKGLSYEFSKDGIIVGRLDFEKLIVPLGVLPQTVK 246 Query: 238 --IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 K D + LL+ N+ + + + + +L+ F I + Sbjct: 247 ALPTKKPRDMSFFELLSYLSNSKDIVDKS---LYVDLYNKLSLPFACFAFACIGVAFGIA 303 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 ++ + +F F+ + + P+ L I IF+ Sbjct: 304 SERKSSAIGFGIAITTVLFYYLIFSLFTTLGYMSYLPPFIASFGADILITIFGIFM 359 >gi|152998004|ref|YP_001342839.1| permease YjgP/YjgQ family protein [Marinomonas sp. MWYL1] gi|150838928|gb|ABR72904.1| permease YjgP/YjgQ family protein [Marinomonas sp. MWYL1] Length = 371 Score = 82.4 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 48/360 (13%), Positives = 119/360 (33%), Gaps = 23/360 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + + S L ++ + + + ++ + L I GY +P+ + Sbjct: 4 RLFRYLAKEVLVSTAGVTLILLLVILSGRFSFYLGRIADGKMTFEFLFVILGYHVPSFVQ 63 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M+ P F + + E+ ++ ++G S++ L L +A L+ + + Sbjct: 64 MILPLAFFLALLLSFGRLYIENEMSVLFSSGISKVKLAGYTLGIAFLVGLVSASINFWLA 123 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + S F +L F S Q R Sbjct: 124 PYSEYKAAEASQAQNQLSAFDFLIPGRFEGSGQRTTYIDSFTKEGWMNQIFLSDVVRKKD 183 Query: 183 THKIYYAQSGSI-------DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 T+ + + + ++ ++ +G + P + + I +F +Y ++ ES + Sbjct: 184 TNIPIQTFAANAEQIRISSEDNQNYLVFKNGTRYEGKPGTANYRITQFDTYAIRMESKD- 242 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 +I+ QN L+N + + E R++ L I +I + Sbjct: 243 ESIIDDPYTQNTLSLINSDKLLE----------KVELQWRISLVLIIPILAIIGLSL--- 289 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLM 353 + ++ + + ++ + + + + P + + ++ I LL Sbjct: 290 SQVNPRQGRFFKMLPAILLMILYIALLIWGRTSLEKGKLPIQLGLWWIHGIFILIAALLF 349 >gi|227357023|ref|ZP_03841394.1| inner membrane protein [Proteus mirabilis ATCC 29906] gi|227162826|gb|EEI47786.1| inner membrane protein [Proteus mirabilis ATCC 29906] Length = 343 Score = 82.4 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 49/343 (14%), Positives = 124/343 (36%), Gaps = 19/343 (5%) Query: 24 VFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRN 83 + I + ++++ + N+++ + IP + ++ P + + + Sbjct: 1 MLIFFSQKLVEILGAAVEGNIPTNLVVSLLWLGIPEMAQLILPLSLFLGLLMTYSKLYVE 60 Query: 84 TELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFS 143 +E+ +++ G + L++ L L++L S+ + + P +Q+ A+ + + Sbjct: 61 SEITVMNACGIGKKALVQAALLLSLLTSVLAAGNVVWLIPWSSVHQEQVLEDAKANPSLA 120 Query: 144 YLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR--DTQTHKIYYAQSGS---IDLDR 198 L E F D + N Q +F+ R Q + A G + Sbjct: 121 ALMEGQFKMSSDRNMVLYLGSVKGNQFQDVFLAQLRPTQNQRPSVVVADKGYTKELPNGN 180 Query: 199 QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNP 258 Q ++L++G + + + +D I F Y S+ + + ++ L + Sbjct: 181 QVVVLSEGTRYEGTAVLRDFRITDFTDYQAVIGHRESTISRNRVEQKTMNELWH------ 234 Query: 259 NYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGV 318 +EFH RLT VI L+ + ++ ++ + ++ + Sbjct: 235 ----STEPESIAEFHWRLTLIFSVVIMALM---VVPLSEVNPRQGRVLSMLPAMLLYLVF 287 Query: 319 FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTKI 361 F S + E+ P++ ++ L ++ + + Sbjct: 288 FLLQSSLRSSGEK-GKVDPLIAMWTVNGIYFALALLLNAWDTL 329 >gi|161524005|ref|YP_001579017.1| permease YjgP/YjgQ family protein [Burkholderia multivorans ATCC 17616] gi|189351234|ref|YP_001946862.1| YjgP/YjgQ-like transporter [Burkholderia multivorans ATCC 17616] gi|160341434|gb|ABX14520.1| permease YjgP/YjgQ family protein [Burkholderia multivorans ATCC 17616] gi|189335256|dbj|BAG44326.1| YjgP/YjgQ-like transporter [Burkholderia multivorans ATCC 17616] Length = 382 Score = 82.4 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 44/380 (11%), Positives = 106/380 (27%), Gaps = 27/380 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRLYEKYFARQIYVTFVFILFAFSGLFFFFDLISELNSVGHGNYKFGYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + + L I ++ Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLLKIGVPLVIVTYLIGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF---------FRLDDDLYIKISKYNPNNTLQ 171 + P +++ +A A S + ++ ++ + P++T+ Sbjct: 121 VGPYADQLSERVRLQALGASVSSNFQSGVWVKDTLAARENGEQVTRFVNVGSLAPDSTIS 180 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPIS---------------K 216 + I + K +L +PI Sbjct: 181 NVRIYEFDAKFQLKNVRIAQTGRYEPPGHWLLKGVTETELTPIQPIAGQAPDALNPVYRS 240 Query: 217 DISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRL 276 + S +++ ++ L + + + Y ++L Sbjct: 241 QQVSLPEYRLRSDLTPQILSVLLVSPERMSIINLFR-YIQHLRENHQDTQRYDIALWRKL 299 Query: 277 TQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 + ++S+ A R +F + + + H N + Sbjct: 300 LYPFAVFVMLVLSLPFAYL--HTRAGVVGVKVFGGIMLGMSFQLLNTLFSHIGTLNTWPA 357 Query: 337 PILYLFLFCISSIFLLMIKK 356 P+ I L K Sbjct: 358 PLTAATPGLIYLALGLFALK 377 >gi|149196258|ref|ZP_01873313.1| permease YjgP/YjgQ [Lentisphaera araneosa HTCC2155] gi|149140519|gb|EDM28917.1| permease YjgP/YjgQ [Lentisphaera araneosa HTCC2155] Length = 358 Score = 82.4 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 50/352 (14%), Positives = 113/352 (32%), Gaps = 5/352 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 YI+R + F+ +FI ++ + ++ + + ++ LIP Sbjct: 4 SILSRYIMRSMLLPFVCCICGFIFIFFIANVQDDLSDMLKLDNT-KDIIIYYFLLIPDKF 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + T +S+NRN E++ + + G S L P+ ++L+ I L++S + Sbjct: 63 TYIAPMSLLLATIYCFSSLNRNHEVIAMRSAGLSLTKLSAPIYLFSVLVGISLYLSSQYL 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 EP CR +L+ +A+ F +S NN + + Sbjct: 123 EPYCRLKTFELNTRAESMDRSHEFHIFTAFDGKQKRKWAVSSDEDNNFSAIQILEYDENN 182 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI---SKDISIMKFKSYTLQTESANSSTI 238 + A SG + + S K + ++ + S I Sbjct: 183 NLTREIEALSGEF-NSEIGWNFKNVSIAEFSEDHRIKKIEKHDNYLRNDIKDDPIILSNI 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 +++ + + + + + + + +I L+ I A Sbjct: 242 DELKGTPSIAQIKSELNSGRPVDTKRKAFLETRQYSLIFSPFSCLIGVLLGIPLATSSQR 301 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 + + + + F+ + P + F+F +F Sbjct: 302 SPGMSAASRAIGIMLVYYIINSAFTNLGRNDILPPMMAAGIGTFIFISFGLF 353 >gi|115352568|ref|YP_774407.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria AMMD] gi|172061427|ref|YP_001809079.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria MC40-6] gi|115282556|gb|ABI88073.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria AMMD] gi|171993944|gb|ACB64863.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria MC40-6] Length = 382 Score = 82.4 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 45/380 (11%), Positives = 107/380 (28%), Gaps = 27/380 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRLYEKYFARQIYVTFIFILFAFSGLFFFFDLISELNSVGHGNYKFGYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + I L I ++ Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLLKIGIPLVIITYLIGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF---------FRLDDDLYIKISKYNPNNTLQ 171 + P +++ +A A S + ++ ++ + +P++T+ Sbjct: 121 VGPYADQLSERVRLQALGASVSSNFQSGVWVKDTLAARENGEQVTRFVNVGNLSPDSTIS 180 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPIS---------------K 216 + I + + +L +PI Sbjct: 181 NVRIYEFDSKFQLQNVRIAQTGRYEPPGHWLLTGVTETELTPIKPISGAPADALNPVYRS 240 Query: 217 DISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRL 276 + S +++ +L L + + + Y ++L Sbjct: 241 QQVTLPEYRLRSDLTPQILSVLLVSPERMSLINLFR-YIQHLRENQQDTQRYDIALWRKL 299 Query: 277 TQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 + ++S+ A R +F + + + H N + Sbjct: 300 LYPFAVFVMLVLSLPFAYL--HTRAGVVGVKVFGGIMLGMSFQLLNTLFSHIGTLNTWPA 357 Query: 337 PILYLFLFCISSIFLLMIKK 356 P+ I L K Sbjct: 358 PLTAATPGLIYLALGLFALK 377 >gi|326565139|gb|EGE15330.1| putative ABC transporter permease protein YjgP/YjgQ [Moraxella catarrhalis 103P14B1] gi|326572842|gb|EGE22827.1| putative ABC transporter permease protein YjgP/YjgQ [Moraxella catarrhalis CO72] gi|326574664|gb|EGE24600.1| putative ABC transporter permease protein YjgP/YjgQ [Moraxella catarrhalis 101P30B1] Length = 369 Score = 82.4 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 44/373 (11%), Positives = 107/373 (28%), Gaps = 18/373 (4%) Query: 1 MK--SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIP 58 MK Y++R + + + + + V L ++ +S T +L L Y P Sbjct: 1 MKSWILPKYVIRSALLAMAGAVVGLWLVQMVFAYLAELDNISE-TYTLTDALLFILYRSP 59 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 L P + L + ++EL+++ G S ++ + A++ Sbjct: 60 YFLVQFIPTGTLLGAVIGLGLLANHSELIVMRAAGMSIYRIVSWAMLPAVIFVAISLGVN 119 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 + P + A + D + Y N G Sbjct: 120 QFVLPTANQYATAIRADTIYDKLITIDGYWSVNHDGDSQDVVYISYADNEGGLGEVKRYQ 179 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-----------DISIMKFKSYT 227 + L + ++N + +S + + K T Sbjct: 180 LKDGQLIAALKAKSGVYLPQSDDVMNAQKARYTWQLSGIDEIGIGTSQVQQAHSEGKILT 239 Query: 228 LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGL 287 L + + + D +LS L + ++ + F ++L + L Sbjct: 240 LPIAPTDVYLLTKEPEDLSLSSLY-AHRQLMAHQGTRSLRHELAFWQKLLSPFAVLSLVL 298 Query: 288 ISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCIS 347 ++ R + + ++L + ++ L +S Sbjct: 299 VASSFVFGSL--RSQGLGLRVVLALLTGLLFSYLTDLTGFVALATGLSPLLMALVPIVLS 356 Query: 348 SI-FLLMIKKKYT 359 ++ + ++ +K + Sbjct: 357 AMAGMYLLNRKSS 369 >gi|319778586|ref|YP_004129499.1| Permease-like protein [Taylorella equigenitalis MCE9] gi|317108610|gb|ADU91356.1| Permease-like protein [Taylorella equigenitalis MCE9] Length = 384 Score = 82.0 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 46/378 (12%), Positives = 130/378 (34%), Gaps = 20/378 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ + I R+ + + ++ + + ++ + ++ ++ ++L + + +PT Sbjct: 1 MKTARKLLSHEIYRTCSLVLVVLLGLFTFFETIEEFDKINEI-YTVWVMLALQAFQLPTR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + + L ++ + EL+I+ +G S L+ + ++A+ + + + + Sbjct: 60 LYDILPIGLLIGSVVALANLAQRNELVILRVSGLSSRKLLFMLWWIALPIIVLATLLSEV 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS-----KYNPNNTLQGIFI 175 I P + ++ + F ++ K + +F Sbjct: 120 ITPWADQKVSAINMAVLGKKSNQLNSGYWFREPVSSNTYRVINLTNLKNDGEIENIKVFE 179 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPIS------------KDISIMKF 223 S D Q ++ A++G+++ + + V + + ++ Sbjct: 180 YSSIDNQFKRLLSAETGTLENNELELTNVVQTVSLVDINKILNDEHDPVLKVSNSNKLEK 239 Query: 224 KSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPV 283 LK + + LL+ + + ++L+ + Sbjct: 240 IKLKTSLTQDRLLATELKPDRMSTLKLLD-YIDYLKENQLEHNKHVVALWRKLSYPFALI 298 Query: 284 IFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLF 342 + ++ + I I L I F + S + + + P +I L Sbjct: 299 VMITLATPLGFIQTRKGGVGAKIFIGILLGIVFFMVNQLSLNMGMLSKLPAWITATLPNI 358 Query: 343 LFCISSIFLLMIKKKYTK 360 + I +I+ L + ++ K Sbjct: 359 IAMILAIYALYMIERKPK 376 >gi|218551558|ref|YP_002385350.1| hypothetical protein EFER_4343 [Escherichia fergusonii ATCC 35469] gi|218359100|emb|CAQ91761.1| conserved hypothetical protein; putative inner membrane protein [Escherichia fergusonii ATCC 35469] gi|324112114|gb|EGC06092.1| inner membrane protein yjgP [Escherichia fergusonii B253] Length = 366 Score = 82.0 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 50/356 (14%), Positives = 126/356 (35%), Gaps = 17/356 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ I I+ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKGVLVKAAMILALFTGIVAAINVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + + + + + + +F+ R Sbjct: 122 PWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSAVLFIESVDGSDFKDVFLAQIRPKG 181 Query: 183 T--HKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F+ Y + Sbjct: 182 NARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + +++ L N + + R+E + RLT + L+ + + Sbjct: 242 DPNDTDQMDMTTLWNTD----------SDRARAELNWRLTLIFTVFMMALMVVPLSVVNP 291 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + + P + + F + K + +P ++ ++ + + Sbjct: 292 RQGRVLSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLW--MWTVNLIYLALAIAL 345 >gi|319784424|ref|YP_004143900.1| permease YjgP/YjgQ family protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170312|gb|ADV13850.1| permease YjgP/YjgQ family protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 360 Score = 82.0 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 41/354 (11%), Positives = 93/354 (26%), Gaps = 13/354 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + Y + + ++ + ++I + + + + ISG +P ++ Sbjct: 4 TLGRYFFFRYVTITIWFFIGLLALVFLIDFTELSGRTTGLPGFTYGTAVAISGLRMPMIM 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLF----IS 117 PF L S+NR EL+I + G S + P A+L + Sbjct: 64 LQTVPFVGLFSAMATLVSLNRRYELVIARSAGVSAWQFLLPCCIGALLFGVLSVGVINPL 123 Query: 118 ENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD 177 QL + ++ D I + Sbjct: 124 AAHAFSWSEQIETQLRSGKSNTVSADAAPWIRQKTSSGDTIIGARAILNQGLEMADVVFF 183 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 D Q + + + L L D + + + I + Sbjct: 184 ILDPQGNIVERKDAARAFLRDGYWELQDVKTFQ----NGTIQASATDRVPTNLKPEFVQE 239 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + L + +F + V LI+ A Sbjct: 240 RLARPETIPFYDL-PGKIEVARSFGLKANAFAMQFDSLVALPFLLVAMTLIA--ATVSMR 296 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 R + I + F ++ S ++ + ++ ++ + ++F Sbjct: 297 FARMGQSATMILGGIIAGFLLYVV-SVLVKAFGVAGFVPTVVAAWVPVMVAMFF 349 >gi|146329237|ref|YP_001210036.1| hypothetical protein DNO_1152 [Dichelobacter nodosus VCS1703A] gi|146232707|gb|ABQ13685.1| conserved hypothetical membrane protein [Dichelobacter nodosus VCS1703A] Length = 349 Score = 82.0 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 60/357 (16%), Positives = 134/357 (37%), Gaps = 12/357 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F Y++R I FL + ++ I + ++ + SL + ++ + ++ Sbjct: 5 IFYRYMMREISALFLAITMILLTIIISFRFSSLLSRALDGSVSLAAIGQLLIFQTANIVV 64 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + + L+ + + E+ + G S+ L++P+L+L + L++ L I+ + Sbjct: 65 ILLPVAFILASVMTLSRLYGDCEINALFAGGCSKKHLMQPILYLVLPLAVILVINTLYLL 124 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P QL A+++ +S+ N F L+ + N FI+ D Sbjct: 125 PHVFERWDQLMAQSRQEALYSFFTPNQFQHLNAHNTLYTGDKINNGF--QPFIIIQNDNN 182 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + + +++ G I ++ L+ + ++ F+ ++ L Sbjct: 183 EYSMLWSKRGEIQKNQPEHFLH------LTQGNRAAWRDDFQPQNCLFSQFAHGSLHLSQ 236 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + + L + +R+EF KRL L VIF + A R + Sbjct: 237 SPPSAQQRLRSIATGALNQSL---AHRAEFQKRLNPALAVVIFSFAVPLLAHTRPRQGRY 293 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYT 359 +++ P FI I + + + Q P+ I + I + + + Sbjct: 294 QRLLPAFILFGIYINLLDIALKMFSR-GQIPFLIGGWGIHFAAAFIIAIYWQRARKP 349 >gi|228472915|ref|ZP_04057672.1| permease [Capnocytophaga gingivalis ATCC 33624] gi|228275497|gb|EEK14274.1| permease [Capnocytophaga gingivalis ATCC 33624] Length = 477 Score = 82.0 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 48/295 (16%), Positives = 106/295 (35%), Gaps = 20/295 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL +F+ S L I+ I I ++ + S +++K ++P + Sbjct: 1 MKILDRYILSRFIFNFISSFLIIMVIFIFQTIWLYVDELVGRGLSFLVVIKFIALMLPNL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P++ P + + L + + EL + +G S + + ++ +LLSI +F + N Sbjct: 61 IPLILPLTVVLSSIMTLGAFGESYELAAMKASGVSLLKATRMLILFMVLLSIGVFFTFNN 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS-- 178 ++P L + + + +F + D K N ++ Sbjct: 121 LQPWSNRKFVALRDSIKNKQPSLAISQGIFNNVQDFSIKVAKKTGENEQYLHDIVIHKVG 180 Query: 179 RDTQTHKIYYAQSGSIDLDRQAI-----ILNDGEVHRKSPISKDISIMKFKSYTLQT--- 230 + T + A++G + ++ IL DG + K F +T Sbjct: 181 INGDTRTVIKAKNGELSGHKKGSDVLQLILKDGSYYEDVYNDKSDITFPFVKAKFETHVL 240 Query: 231 ----------ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKR 275 + + + N+S L + + + + + F++R Sbjct: 241 NIDISALNADITYDENAERDYYKTMNISQLSHALDSIVQNYQQETKDFGENFYRR 295 Score = 43.8 bits (101), Expect = 0.037, Method: Composition-based stats. Identities = 15/105 (14%), Positives = 45/105 (42%), Gaps = 6/105 (5%) Query: 251 LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFI 310 L+ N +N Y+ +L+ YR ++ + + ++ A A++R+ P+ + Sbjct: 349 LDNNKDNVEYQQKLINVYRLTLSDKIALAITCFVLFFVA---APLGAIIRKGGIGMPLVV 405 Query: 311 SLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--FCISSIFLLM 353 ++ + F ++ + + N P + ++ F + + + + Sbjct: 406 AIGL-FLSYYFSGLLTKNMATNGNINPYIAPWVPTFFLLPLGVYL 449 >gi|221199306|ref|ZP_03572350.1| putative membrane protein [Burkholderia multivorans CGD2M] gi|221205792|ref|ZP_03578807.1| putative membrane protein [Burkholderia multivorans CGD2] gi|221174630|gb|EEE07062.1| putative membrane protein [Burkholderia multivorans CGD2] gi|221180591|gb|EEE12994.1| putative membrane protein [Burkholderia multivorans CGD2M] Length = 382 Score = 82.0 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 44/380 (11%), Positives = 106/380 (27%), Gaps = 27/380 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRLYEKYFARQIYVTFVFILFAFSGLFFFFDLISELNSVGHGNYKFGYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + + L I ++ Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLLKIGVPLVIVTYLIGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF---------FRLDDDLYIKISKYNPNNTLQ 171 + P +++ +A A S + ++ ++ + P++T+ Sbjct: 121 VGPYADQLSERVRLQALGASVSSNFQSGVWVKDTLAARENGEQVTRFVNVGSLAPDSTIS 180 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI---------------SK 216 + I + K +L +PI Sbjct: 181 NVRIYEFDAKFQLKNVRIAQTGRYEPPGHWLLKGVTETELTPIRPIAGQAPDALNPVYRS 240 Query: 217 DISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRL 276 + S +++ ++ L + + + Y ++L Sbjct: 241 QQVSLPEYRLRSDLTPQILSVLLVSPERMSIINLFR-YIQHLRENHQDTQRYDIALWRKL 299 Query: 277 TQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 + ++S+ A R +F + + + H N + Sbjct: 300 LYPFAVFVMLVLSLPFAYL--HTRAGVVGVKVFGGIMLGMSFQLLNTLFSHIGTLNTWPA 357 Query: 337 PILYLFLFCISSIFLLMIKK 356 P+ I L K Sbjct: 358 PLTAATPGLIYLALGLFALK 377 >gi|195940457|ref|ZP_03085839.1| permease YjgP/YjgQ family protein [Escherichia coli O157:H7 str. EC4024] Length = 366 Score = 82.0 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 53/375 (14%), Positives = 133/375 (35%), Gaps = 31/375 (8%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGEIPTNLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ I ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMVLALFTGIVAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + D + + N +F+ R Sbjct: 122 PTSSRHQDEVLAEAKANPGLAALAQGQFQQATDGNSVLFIESVDGNRFNDVFLAQLRPKG 181 Query: 183 T--HKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F++Y + Sbjct: 182 NARPSVVVADSGQLAQRKDGSQVVTLNKGTRFEGTAMLRDFRITDFQNYQAIIGHQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 ++ L+N + + R+E H R+T + L+ Sbjct: 242 DPTDTEQMDMRTLMNTDTD----------RARAELHWRITLVFTVFMMALM---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF------LFCISSIFL 351 + ++ ++ + ++ + F + I + P+++ + L + L Sbjct: 289 VNPRQGRVLSMLPAMLLYLVFFLLQTSIKSNGGK-GKIDPMIWTWVVNGLYLLLAVGLNL 347 Query: 352 L------MIKKKYTK 360 ++ ++T+ Sbjct: 348 WDTVPVRRLRARFTR 362 >gi|313680974|ref|YP_004058713.1| permease yjgp/yjgq family protein [Oceanithermus profundus DSM 14977] gi|313153689|gb|ADR37540.1| permease YjgP/YjgQ family protein [Oceanithermus profundus DSM 14977] Length = 377 Score = 82.0 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 54/382 (14%), Positives = 103/382 (26%), Gaps = 33/382 (8%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YILR + L+S L V + + + +L GY +P VL Sbjct: 3 TILDRYILREVVPVLLVSALLYVAVFLFGFFYVGSRWL--DGAPVLKVLTWLGYHVPGVL 60 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 V P M +L G S + L++PVL L LL+ F + Sbjct: 61 VQVLPMAVVSAVVIPFGRMATEGAVLATQAGGVSLVRLLRPVLLLGFLLAGFSLYLSENV 120 Query: 122 EPKCRSTIKQLSAKAQLA---------------------LTFSYLEENLFFRLDDDLYIK 160 P+ + ++ Y + K Sbjct: 121 VPESNARVRGYWYDELTTPGHGLYRLRGKTVPLGNGIELFFSGYDWAHRAMTGVRLQLWK 180 Query: 161 ISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDI 218 + +G++ ++IY +ID + L +S Sbjct: 181 DRQVTVIFADRGVYQGRDLKLTGYRIYTVDYAAIDGLLNASDAQLPARLQQVFKNVSVPR 240 Query: 219 SIMKFKSYTLQTESANSSTIVLKANDQNLSFL--LNPNPNNPNYRPELLETYRSEFHKRL 276 S + + + + L +P P FH +L Sbjct: 241 SEEASTTIKVGLSRDEALANFADPLAADTLSLSEAWQRYTDPKLAPADRTDAGLAFHSKL 300 Query: 277 TQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 L V+ LIS+ A + I++ ++ + + Sbjct: 301 ALPLANVVLVLISLPFAVYYGRSPGLSMGMSVMIAVG-----YYLVFLLARSMGGLGMLP 355 Query: 337 PILYLFLF-CISSIFLLMIKKK 357 P L + + + + ++ Sbjct: 356 PALAAWGANLLFAFVGWRLIRR 377 >gi|51245020|ref|YP_064904.1| hypothetical protein DP1168 [Desulfotalea psychrophila LSv54] gi|50876057|emb|CAG35897.1| unknown protein [Desulfotalea psychrophila LSv54] Length = 362 Score = 82.0 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 55/363 (15%), Positives = 126/363 (34%), Gaps = 8/363 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+L + FL + + +I ++ + + + + L++++K + IP + Sbjct: 1 MHLLNRYLLGQFFKFFLTVAAGFIALYLLIDFFEKFDNFTEAGKPLSVVIKYFLFSIPAI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLS-IFLFISEN 119 + + P + L +N + EL + G +I+P++ ++ +F+ ++ Sbjct: 61 VDQLGPILILLSGVISLGVLNSSNELTALKAGGLPLRAIIRPIIIGGGAVTLLFMASAQW 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV--D 177 I+ T Q + N ++ + + + N L F Sbjct: 121 ILPSTVAVTNDIWIEGVQGKTPVGIVRNNRYYYHGQEGFYSFAWKNNKEYLFANFSYSSW 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGE-VHRKSPISKDISIMKFKSYTLQTESANSS 236 ++ ++ A S S D + + +L G ++S S + + + Sbjct: 181 DKEYGLKEMISATSASWDAKQNSWLLKGGVLQQQESRGSYTTTTFTSRKFHFPETPEAFR 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 T ++++LS LL NN E F R++ L + L + Sbjct: 241 TPQHAESERSLSALLKGALNNQIA--FEAEEAWGLFLGRISYILLGLPLLL-LGLPILLL 297 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL-LMIK 355 + + K + + W + + + P L FL I L L + Sbjct: 298 SYQKWGKDLSIAIPASCTMAFSAWAVWGALQSLAIAGKFSPWLAAFLIHAIFITLGLYLL 357 Query: 356 KKY 358 +++ Sbjct: 358 RRF 360 >gi|254374090|ref|ZP_04989572.1| permease YjgP/YjgQ family protein [Francisella novicida GA99-3548] gi|151571810|gb|EDN37464.1| permease YjgP/YjgQ family protein [Francisella novicida GA99-3548] Length = 360 Score = 82.0 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 56/358 (15%), Positives = 123/358 (34%), Gaps = 12/358 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 E Y + I +F LFI+ I +++ S ++ ++K IP + Sbjct: 2 ILEKYYNKDIVNTFTSITLFIISIVSANLLIRLFQEAYSQGLGIDSIVKFVILTIPENVS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + N E+ + G + + ++K L + L+I I+ + Sbjct: 62 LVAPIAIFLAIVICFGKYFANNEMFVTLAGGITWMQIVKNTLKPVVALTIITLITVMYLN 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + T+ A S + + + D I I + N ++ Sbjct: 122 PLSKQTLDIYKASLSAKALLSSITDQKIIKAPDGKIIYIGNKSGNTLSDVFLYQNTPQDG 181 Query: 183 THKIYYAQSGSIDLDRQAII--LNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 +K+ A + I D+ A + ++ K+ + + S K + Sbjct: 182 EYKVMTAPTAKIVSDKTAAYIDFMNVNIYTKNSQNSEYSYDNAKKAIYTIFDNSDRDYNH 241 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 D+ L N N+ Y++EF R+ + ++ S++A L Sbjct: 242 DRVDRLYMHTLIENFNDKA----NGTAYKAEFFGRINNAISVIVS---SLLALALCRLRP 294 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMIKK 356 ++ K + S+ + ++ + I+ + N + +L + + I+K Sbjct: 295 RQNKYAKLLPSVVV-LAIYLCTNMFINTLMANGSVPVWIGFWLPHIFFTIFAVRTIRK 351 >gi|209749454|gb|ACI73034.1| hypothetical protein ECs5238 [Escherichia coli] Length = 366 Score = 82.0 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 48/361 (13%), Positives = 132/361 (36%), Gaps = 19/361 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ +I ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + + L + F + + + + + + +F+ R Sbjct: 122 PWSSRHQDEVLAEAKANPSMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKG 181 Query: 183 T--HKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F+ Y + Sbjct: 182 NARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L N + + R+E + R+T + L+ Sbjct: 242 DPNDTDQMDMRTLWNTDTD----------RARAELNWRITLVFTVFMMALM---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ ++ + ++ + F + + + P L+++ + + L ++ Sbjct: 289 VNPRQGRVLSMLPAMLLYLLFFLIQTSLKSNGGK-GKLDPTLWMWTVNLIYLALAIVLNL 347 Query: 358 Y 358 + Sbjct: 348 W 348 >gi|156935580|ref|YP_001439496.1| hypothetical protein ESA_03444 [Cronobacter sakazakii ATCC BAA-894] gi|156935598|ref|YP_001439514.1| hypothetical protein ESA_03463 [Cronobacter sakazakii ATCC BAA-894] gi|156533834|gb|ABU78660.1| hypothetical protein ESA_03444 [Cronobacter sakazakii ATCC BAA-894] gi|156533852|gb|ABU78678.1| hypothetical protein ESA_03463 [Cronobacter sakazakii ATCC BAA-894] Length = 370 Score = 82.0 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 53/345 (15%), Positives = 126/345 (36%), Gaps = 19/345 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPTNLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+L I ++ Sbjct: 62 LILPLSLFLALLMTLGRLYTESEITVMHACGLSKAVLVKAAMVLALLTGIVAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + D + + + +F+ R Sbjct: 122 PWSSRHQDEVLAEAKANPGMAALAQGQFQQATDGNAVLFIESVNGSKFNDVFLAQLRPKG 181 Query: 183 T--HKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I FK Y + Sbjct: 182 NARPSVVVADSGELSQRKDGSQVVTLNQGTRFEGTAMLRDFRITDFKDYKAIIGHQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 A ++ L N + R+EFH RLT ++ L+ Sbjct: 242 DPDDAEQMDMKTLWQANSKSA----------RAEFHWRLTLVFAVIVMALM---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 + ++ ++ + ++ + F + + + P+++++ Sbjct: 289 VNPRQGRVLSMLPAMLLYLIFFLLQTSLRSNGAK-GKLDPLIWMW 332 >gi|86131956|ref|ZP_01050553.1| predicted permease YjgP/YjgQ family [Dokdonia donghaensis MED134] gi|85817778|gb|EAQ38952.1| predicted permease YjgP/YjgQ family [Dokdonia donghaensis MED134] Length = 552 Score = 82.0 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 74/188 (39%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI ++FL ++FI + + I ++ +++LK + +P++ Sbjct: 1 MKILDRYIFFTFVKTFLSIFTILMFIFVLQSVWLYIQELAGRDLDFDVILKFLLFAMPSL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + +V P + + + N E + +TG S +K V+F I L I F+ N Sbjct: 61 VTLVLPLSVLLTSIMTFGNFAENYEFAAMKSTGISLQRAMKSVIFFIIFLGIASFLFANY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + L + F + DD +++++ + +V + Sbjct: 121 VIPASQYEFRNLRNNIGKMKPAMLIRSGQFNEVGDDFNMRVAEKYGDRDQYLRDVVIHQK 180 Query: 181 TQTHKIYY 188 + Y Sbjct: 181 EKGRLGNY 188 Score = 45.8 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 17/149 (11%), Positives = 48/149 (32%), Gaps = 4/149 (2%) Query: 209 HRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETY 268 ++ + + I + + + + K+N N + + L + Sbjct: 307 YQGNVKQQSAEIKEAILDNYEIKDRVRILEIAKSNISNTIADIENRKKILKIDVKRLSKF 366 Query: 269 RSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHK 328 H++ ++ + A A++R+ PI I + + + + + Sbjct: 367 EISLHEKYVLGFSCILLFFVG---APLGAIIRKGGLGLPIVIGVVLFLTFHFIGIFAKNS 423 Query: 329 IEQNPYYIPIL-YLFLFCISSIFLLMIKK 356 E N I +L F + + + + + Sbjct: 424 AEDNSISPFIASWLSTFILFPLGVYLTYR 452 >gi|296104924|ref|YP_003615070.1| permease YjgP/YjgQ family protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059383|gb|ADF64121.1| permease YjgP/YjgQ family protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 359 Score = 82.0 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 56/365 (15%), Positives = 130/365 (35%), Gaps = 23/365 (6%) Query: 9 LRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFC 68 +R +S L ++ I + ++++ + N++L + G IP + ++ P Sbjct: 1 MRETLKSQLAILFILLLIFFCQKLVKILGAAVDGEIPTNLVLSLLGLGIPEMAQLILPLS 60 Query: 69 FAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRST 128 + L + +E+ ++ G S+ L+K + LA+ I ++ P Sbjct: 61 LFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILALFTGIVAAVNVMWAGPMSSRH 120 Query: 129 IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT--HKI 186 ++ A+A+ + L + F + D + + + +F+ R + Sbjct: 121 QDEVLAEAKANPGMAALAQGQFQQATDGNSVLFIESVDGSKFNDVFLAQLRTKGNARPSV 180 Query: 187 YYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 A SG + Q + LN G + + +D I F++Y + Sbjct: 181 VVADSGQLAQRKDGSQVVTLNKGTRFEGTAMLRDFRITDFQNYQAIIGHQAVALDPTDTE 240 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 ++ L N + + R+EFH R+T + LI + + + Sbjct: 241 QMDMRTLWNTDTD----------RARAEFHWRITLVFTVFMMALIVVPLSVVNPRQGRVL 290 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM--------IK 355 + P + I F + K + +P L+ + ++ L + I+ Sbjct: 291 SMLPAMLLYLIYFLLQTSIRSNGAKGKLDPMVWTWFVNSLYILLALGLNLWDTVPVRRIR 350 Query: 356 KKYTK 360 ++++ Sbjct: 351 ARFSR 355 >gi|162148705|ref|YP_001603166.1| permease [Gluconacetobacter diazotrophicus PAl 5] gi|209545528|ref|YP_002277757.1| permease YjgP/YjgQ family protein [Gluconacetobacter diazotrophicus PAl 5] gi|161787282|emb|CAP56876.1| putative permease [Gluconacetobacter diazotrophicus PAl 5] gi|209533205|gb|ACI53142.1| permease YjgP/YjgQ family protein [Gluconacetobacter diazotrophicus PAl 5] Length = 377 Score = 82.0 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 44/361 (12%), Positives = 106/361 (29%), Gaps = 13/361 (3%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 Y+ R + L + ++ + ++ +L+++ + + L L P +L Sbjct: 17 LTRYLTRELAGRILTAGAILLALMEILALLEQLTPILERHQGLRGALYFMALHAPLLLGS 76 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 + P + + +L M +E+ I+ G + L++ +L + L + + ++ + P Sbjct: 77 IFPLAVLIGSLVMLVHMTTASEIAILRAAGLTTPALVRLMLPAVLGLGLAATLIDDQVTP 136 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + + F+ + + G+ V RD Sbjct: 137 RAELALARWWNLTDPHPEAGR----SFWFRSGTTLVDVGYVAQGGRELGMVDVYGRDGSG 192 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 A G D P + + + L+ + Sbjct: 193 RLSRVAHLGGAHYANGEWTGTDARGLTVLPSEVIPAPAEPAAEAAGPMRGLGWPAGLRPD 252 Query: 244 DQ-----NLSFL----LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 D + L + + + R+ R L ++ L++I Sbjct: 253 DMVRLSMDTPPLAASTMVAMMRDRAPSTQPPAALRTALLGRALTPLTFMVMLLLAIPVVY 312 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R + + + F VF G + P L + ++ LM+ Sbjct: 313 IPPRSGTRSWLPVWCLGAGLLFVVFQGLLQALGNAGSLPALAATLPGIVIFTFAVSALML 372 Query: 355 K 355 + Sbjct: 373 R 373 >gi|49474100|ref|YP_032142.1| hypothetical protein BQ04620 [Bartonella quintana str. Toulouse] gi|49239604|emb|CAF25961.1| Hypothetical transmembrane protein [Bartonella quintana str. Toulouse] Length = 364 Score = 82.0 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 46/356 (12%), Positives = 105/356 (29%), Gaps = 14/356 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVS-SSTESLNILLKISGYLIPTVL 61 + Y + I +A++I + + +S + + IS IP ++ Sbjct: 5 TLGRYFFVRYLKMTCYFFGSIFVLAFLIDFTENSSRLSYLPSYTAKDAFLISVLRIPFIM 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF +L S+NR EL++ + G S + P F A L +F + N + Sbjct: 65 QQLIPFIALFSAMAMLISLNRKCELVVTRSIGVSAWQFLMPACFGAFLFGLFSILLVNPL 124 Query: 122 EPKCRSTIKQLSAKAQL------ALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI 175 S ++++ + + + D I Sbjct: 125 AAWGFSQAEKMTTEWRSNNVLTSFHNTRIIPWLTQRTNSDRTTIGAKSITDQGLSLIDAT 184 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + + + L +L +G +++ + + + K+ + Sbjct: 185 FVQYNDNATVKNWINTRKATLTNGVWLLTNGTIYKIGHPPEKFTEFQIKT---NLKPEFL 241 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + + L + + + LI+ + Sbjct: 242 TERLANPATIPFYQL-PKKIMIARSFGYSANNFDMYLQSLIALPALLIAMTLIAATVSL- 299 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 R + IF + F ++ S ++ Y PI+ + I ++FL Sbjct: 300 -NFTRFGQSGTLIFGGVIAGFTLY-VISVLVQAFGNAGYMPPIIAAWTPVIIALFL 353 >gi|33591556|ref|NP_879200.1| hypothetical protein BP0325 [Bordetella pertussis Tohama I] gi|33571198|emb|CAE40702.1| putative membrane protein [Bordetella pertussis Tohama I] gi|332380956|gb|AEE65803.1| hypothetical protein BPTD_0320 [Bordetella pertussis CS] Length = 392 Score = 82.0 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 48/371 (12%), Positives = 115/371 (30%), Gaps = 24/371 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M++ Y+ R I RS + L ++ + ++ ++ V S+ L + +PT Sbjct: 1 MRTARRYLAREIYRSCAVVLLALLGLFTFFALVDDLDNVGDK-FSMLALFYMQALALPTR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L + + EL+I+ +G S + L+ + + I L I + Sbjct: 60 LYDLLPIGLLIGAILALAGLAQRNELVILRVSGVSGMRLLGMLWVITIPLMIGATLLSEF 119 Query: 121 IEPKCRSTIKQLSAKAQLA----LTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + P + + S + I I + ++ + + Sbjct: 120 VTPAAEIKSGEADLTFRGKTGGGRLNSGYWFKEPTPQNGTRIINIKTLLADGQVKDVTLY 179 Query: 177 DSRDT-QTHKIYYAQSGSIDLDRQAIILNDGEVHRKS------------PISKDISIMKF 223 + R + ++ A +G +L D R P + K Sbjct: 180 EFRSDLEMTALWTAPNGRFSRGDL--VLTDVSETRIDEHAPSALADAKQPKEPPARVTKV 237 Query: 224 KSYTLQTESANSSTI-VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFP 282 L T + + + ++ + L + + ++L Sbjct: 238 PELKLDTTLSPERLLARVLTPERMSALTLVDYIEYLRHNQLQYDRQVVALWRKLVYPFTL 297 Query: 283 VIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 ++ I+ R+ +FI + + G F + + + + P + Sbjct: 298 LVMITIAAPIGFM--QTRRGGVGAKVFIGILLGVGFF-MLNQLALNVGMLSRWPPWITAL 354 Query: 343 LFCISSIFLLM 353 + ++ L Sbjct: 355 GPNLGALLLAF 365 >gi|88800548|ref|ZP_01116110.1| predicted Permease [Reinekea sp. MED297] gi|88776693|gb|EAR07906.1| predicted Permease [Reinekea sp. MED297] Length = 350 Score = 82.0 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 48/359 (13%), Positives = 122/359 (33%), Gaps = 18/359 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y+ I + F+ L ++ + +I + + + S N L + G+ +P +L Sbjct: 2 TLYRYLYGQIMKPFVFMTLVLLILLIATEISDTLTKILTGQFSDNALWVVIGFQVPILLQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P F + L +++++E I+ G S L++ +L A L ++ L ++ N Sbjct: 62 EILPAAFFLACLTTLHRLSQDSERAILHAIGISDGDLLRFLLVFAALPAMLLVLALNHYI 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 +L QL + + + F + N+ Q + V + Sbjct: 122 TPKAQENLELYVTEQLNRPITDIIDANSFYNIGAINATFYAARNNSQTQSLEDVFTIAKS 181 Query: 183 THKIYYAQSGSID----LDRQAIILNDGEVHRKSPISKD-ISIMKFKSYTLQTESANSST 237 + + + Q +GE + S + + +F L+ E +++ Sbjct: 182 QSSYTVTAAKEVRTQGAENAQYFQFFEGEQTQFSFDESEPLQTQRFGMMQLRIEEDGNAS 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + N L + R L+ +F + ++V Sbjct: 242 PWQRRNALTSFELAKSEDRHDQLT----------LISRFATSLYLPLFCIWAVVLT---R 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + K+ + + + + + + + + ++ I + F + + L+ + Sbjct: 289 FKPRSAKVGAMALGIVLYILTNFAYRTLHGAVGRSDLSILFQPWWFFVVLGVIALITLR 347 >gi|15804853|ref|NP_290894.1| hypothetical protein Z5873 [Escherichia coli O157:H7 EDL933] gi|15834492|ref|NP_313265.1| hypothetical protein ECs5238 [Escherichia coli O157:H7 str. Sakai] gi|16132083|ref|NP_418682.1| lipopolysaccharide export ABC permease of the LptBFGC export complex [Escherichia coli str. K-12 substr. MG1655] gi|26251170|ref|NP_757210.1| hypothetical protein c5362 [Escherichia coli CFT073] gi|30065452|ref|NP_839623.1| hypothetical protein S4489 [Shigella flexneri 2a str. 2457T] gi|56480551|ref|NP_709940.2| hypothetical protein SF4228 [Shigella flexneri 2a str. 301] gi|82546486|ref|YP_410433.1| hypothetical protein SBO_4179 [Shigella boydii Sb227] gi|89110977|ref|AP_004757.1| conserved inner membrane protein [Escherichia coli str. K-12 substr. W3110] gi|91213817|ref|YP_543803.1| hypothetical protein UTI89_C4868 [Escherichia coli UTI89] gi|110644620|ref|YP_672350.1| putative membrane protein YjgP [Escherichia coli 536] gi|117626605|ref|YP_859928.1| hypothetical protein APECO1_2133 [Escherichia coli APEC O1] gi|157163736|ref|YP_001461054.1| putative permease [Escherichia coli HS] gi|168749567|ref|ZP_02774589.1| putative permease [Escherichia coli O157:H7 str. EC4113] gi|168754843|ref|ZP_02779850.1| putative permease [Escherichia coli O157:H7 str. EC4401] gi|168760516|ref|ZP_02785523.1| putative permease [Escherichia coli O157:H7 str. EC4501] gi|168766552|ref|ZP_02791559.1| putative permease, YjgP/YjgQ family [Escherichia coli O157:H7 str. EC4486] gi|168774017|ref|ZP_02799024.1| putative permease [Escherichia coli O157:H7 str. EC4196] gi|168782788|ref|ZP_02807795.1| putative permease [Escherichia coli O157:H7 str. EC4076] gi|168784911|ref|ZP_02809918.1| putative permease, YjgP/YjgQ family [Escherichia coli O157:H7 str. EC869] gi|168797841|ref|ZP_02822848.1| putative permease [Escherichia coli O157:H7 str. EC508] gi|170021731|ref|YP_001726685.1| permease YjgP/YjgQ family protein [Escherichia coli ATCC 8739] gi|170083700|ref|YP_001733020.1| inner membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|170681521|ref|YP_001746665.1| putative permease [Escherichia coli SMS-3-5] gi|191170651|ref|ZP_03032203.1| putative permease [Escherichia coli F11] gi|193063666|ref|ZP_03044754.1| putative permease, YjgP/YjgQ family [Escherichia coli E22] gi|193069837|ref|ZP_03050787.1| putative permease [Escherichia coli E110019] gi|195937287|ref|ZP_03082669.1| inner membrane protein [Escherichia coli O157:H7 str. EC4024] gi|208807252|ref|ZP_03249589.1| putative permease [Escherichia coli O157:H7 str. EC4206] gi|208812743|ref|ZP_03254072.1| putative permease [Escherichia coli O157:H7 str. EC4045] gi|208819114|ref|ZP_03259434.1| putative permease [Escherichia coli O157:H7 str. EC4042] gi|209395855|ref|YP_002273806.1| putative permease [Escherichia coli O157:H7 str. EC4115] gi|209921758|ref|YP_002295842.1| hypothetical protein ECSE_4567 [Escherichia coli SE11] gi|215489603|ref|YP_002332034.1| conserved inner membrane protein [Escherichia coli O127:H6 str. E2348/69] gi|217324429|ref|ZP_03440513.1| putative permease [Escherichia coli O157:H7 str. TW14588] gi|218556808|ref|YP_002389722.1| hypothetical protein ECIAI1_4492 [Escherichia coli IAI1] gi|218561419|ref|YP_002394332.1| hypothetical protein ECS88_4848 [Escherichia coli S88] gi|218698009|ref|YP_002405676.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli 55989] gi|218707867|ref|YP_002415386.1| hypothetical protein ECUMN_4793 [Escherichia coli UMN026] gi|227886685|ref|ZP_04004490.1| inner membrane protein [Escherichia coli 83972] gi|237703936|ref|ZP_04534417.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|238903362|ref|YP_002929158.1| conserved inner membrane protein [Escherichia coli BW2952] gi|253775116|ref|YP_003037947.1| permease YjgP/YjgQ family protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254164186|ref|YP_003047296.1| inner membrane protein [Escherichia coli B str. REL606] gi|254796281|ref|YP_003081118.1| inner membrane protein [Escherichia coli O157:H7 str. TW14359] gi|256019913|ref|ZP_05433778.1| conserved inner membrane protein [Shigella sp. D9] gi|260847092|ref|YP_003224870.1| inner membrane protein [Escherichia coli O103:H2 str. 12009] gi|260871013|ref|YP_003237415.1| inner membrane protein [Escherichia coli O111:H- str. 11128] gi|261225380|ref|ZP_05939661.1| conserved inner membrane protein [Escherichia coli O157:H7 str. FRIK2000] gi|261255367|ref|ZP_05947900.1| inner membrane protein [Escherichia coli O157:H7 str. FRIK966] gi|291285673|ref|YP_003502491.1| Inner membrane protein yjgP [Escherichia coli O55:H7 str. CB9615] gi|293402886|ref|ZP_06646983.1| lipopolysaccharide export system permease lptF [Escherichia coli FVEC1412] gi|293407981|ref|ZP_06651821.1| conserved hypothetical protein [Escherichia coli B354] gi|293417761|ref|ZP_06660383.1| lipopolysaccharide export system permease lptF [Escherichia coli B185] gi|293476564|ref|ZP_06664972.1| lipopolysaccharide export system permease lptF [Escherichia coli B088] gi|297519576|ref|ZP_06937962.1| Inner membrane protein yjgP [Escherichia coli OP50] gi|298378412|ref|ZP_06988296.1| lipopolysaccharide export system permease lptF [Escherichia coli FVEC1302] gi|300818514|ref|ZP_07098723.1| putative inner membrane protein [Escherichia coli MS 107-1] gi|300821368|ref|ZP_07101516.1| putative inner membrane protein [Escherichia coli MS 119-7] gi|300899411|ref|ZP_07117666.1| putative inner membrane protein [Escherichia coli MS 198-1] gi|300906109|ref|ZP_07123828.1| putative inner membrane protein [Escherichia coli MS 84-1] gi|300923939|ref|ZP_07139949.1| putative inner membrane protein [Escherichia coli MS 182-1] gi|300950209|ref|ZP_07164150.1| putative inner membrane protein [Escherichia coli MS 116-1] gi|300957116|ref|ZP_07169357.1| putative inner membrane protein [Escherichia coli MS 175-1] gi|300972386|ref|ZP_07171919.1| putative inner membrane protein [Escherichia coli MS 45-1] gi|300988161|ref|ZP_07178581.1| putative inner membrane protein [Escherichia coli MS 200-1] gi|301024383|ref|ZP_07188071.1| putative inner membrane protein [Escherichia coli MS 69-1] gi|301050053|ref|ZP_07196965.1| putative inner membrane protein [Escherichia coli MS 185-1] gi|301304686|ref|ZP_07210794.1| putative inner membrane protein [Escherichia coli MS 124-1] gi|301643391|ref|ZP_07243441.1| putative inner membrane protein [Escherichia coli MS 146-1] gi|306815521|ref|ZP_07449670.1| Inner membrane protein yjgP [Escherichia coli NC101] gi|307140956|ref|ZP_07500312.1| Inner membrane protein yjgP [Escherichia coli H736] gi|309792902|ref|ZP_07687330.1| putative inner membrane protein [Escherichia coli MS 145-7] gi|331645010|ref|ZP_08346127.1| inner membrane protein YjgP [Escherichia coli H736] gi|331650394|ref|ZP_08351466.1| inner membrane protein YjgP [Escherichia coli M605] gi|331656095|ref|ZP_08357083.1| inner membrane protein YjgP [Escherichia coli M718] gi|331660842|ref|ZP_08361774.1| inner membrane protein YjgP [Escherichia coli TA206] gi|331665930|ref|ZP_08366824.1| inner membrane protein YjgP [Escherichia coli TA143] gi|331671402|ref|ZP_08372200.1| inner membrane protein YjgP [Escherichia coli TA280] gi|331680399|ref|ZP_08381058.1| inner membrane protein YjgP [Escherichia coli H591] gi|331681281|ref|ZP_08381918.1| inner membrane protein YjgP [Escherichia coli H299] gi|332281053|ref|ZP_08393466.1| conserved hypothetical protein [Shigella sp. D9] gi|84027984|sp|P0AFA0|LPTF_ECO57 RecName: Full=Lipopolysaccharide export system permease protein lptF gi|84027985|sp|P0AF99|LPTF_ECOL6 RecName: Full=Lipopolysaccharide export system permease protein lptF gi|84027986|sp|P0AF98|LPTF_ECOLI RecName: Full=Lipopolysaccharide export system permease protein lptF gi|84027987|sp|P0AFA1|LPTF_SHIFL RecName: Full=Lipopolysaccharide export system permease protein lptF gi|12519273|gb|AAG59460.1|AE005658_2 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933] gi|26111602|gb|AAN83784.1|AE016771_295 Hypothetical protein yjgP [Escherichia coli CFT073] gi|537103|gb|AAA97158.1| ORF_o366 [Escherichia coli str. K-12 substr. MG1655] gi|1790712|gb|AAC77218.1| lipopolysaccharide export ABC permease of the LptBFGC export complex [Escherichia coli str. K-12 substr. MG1655] gi|13364716|dbj|BAB38661.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai] gi|30043716|gb|AAP19435.1| hypothetical protein S4489 [Shigella flexneri 2a str. 2457T] gi|31323180|gb|AAP43524.1| YjgP [Escherichia coli B] gi|56384102|gb|AAN45647.2| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|81247897|gb|ABB68605.1| conserved hypothetical protein [Shigella boydii Sb227] gi|85677008|dbj|BAE78258.1| conserved inner membrane protein [Escherichia coli str. K12 substr. W3110] gi|91075391|gb|ABE10272.1| hypothetical protein UTI89_C4868 [Escherichia coli UTI89] gi|110346212|gb|ABG72449.1| putative membrane protein YjgP [Escherichia coli 536] gi|115515729|gb|ABJ03804.1| conserved hypothetical protein [Escherichia coli APEC O1] gi|157069416|gb|ABV08671.1| putative permease [Escherichia coli HS] gi|169756659|gb|ACA79358.1| permease YjgP/YjgQ family protein [Escherichia coli ATCC 8739] gi|169891535|gb|ACB05242.1| conserved inner membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|170519239|gb|ACB17417.1| putative permease [Escherichia coli SMS-3-5] gi|187770319|gb|EDU34163.1| putative permease [Escherichia coli O157:H7 str. EC4196] gi|188016154|gb|EDU54276.1| putative permease [Escherichia coli O157:H7 str. EC4113] gi|188999811|gb|EDU68797.1| putative permease [Escherichia coli O157:H7 str. EC4076] gi|189357793|gb|EDU76212.1| putative permease [Escherichia coli O157:H7 str. EC4401] gi|189364084|gb|EDU82503.1| putative permease, YjgP/YjgQ family [Escherichia coli O157:H7 str. EC4486] gi|189368987|gb|EDU87403.1| putative permease [Escherichia coli O157:H7 str. EC4501] gi|189374999|gb|EDU93415.1| putative permease, YjgP/YjgQ family [Escherichia coli O157:H7 str. EC869] gi|189379426|gb|EDU97842.1| putative permease [Escherichia coli O157:H7 str. EC508] gi|190908875|gb|EDV68462.1| putative permease [Escherichia coli F11] gi|192930653|gb|EDV83259.1| putative permease, YjgP/YjgQ family [Escherichia coli E22] gi|192956891|gb|EDV87344.1| putative permease [Escherichia coli E110019] gi|208727053|gb|EDZ76654.1| putative permease [Escherichia coli O157:H7 str. EC4206] gi|208734020|gb|EDZ82707.1| putative permease [Escherichia coli O157:H7 str. EC4045] gi|208739237|gb|EDZ86919.1| putative permease [Escherichia coli O157:H7 str. EC4042] gi|209157255|gb|ACI34688.1| putative permease [Escherichia coli O157:H7 str. EC4115] gi|209749448|gb|ACI73031.1| hypothetical protein ECs5238 [Escherichia coli] gi|209749450|gb|ACI73032.1| hypothetical protein ECs5238 [Escherichia coli] gi|209749452|gb|ACI73033.1| hypothetical protein ECs5238 [Escherichia coli] gi|209749456|gb|ACI73035.1| hypothetical protein ECs5238 [Escherichia coli] gi|209915017|dbj|BAG80091.1| conserved hypothetical protein [Escherichia coli SE11] gi|215267675|emb|CAS12133.1| conserved inner membrane protein [Escherichia coli O127:H6 str. E2348/69] gi|217320650|gb|EEC29074.1| putative permease [Escherichia coli O157:H7 str. TW14588] gi|218354741|emb|CAV01804.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli 55989] gi|218363577|emb|CAR01234.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli IAI1] gi|218368188|emb|CAR05996.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli S88] gi|218434964|emb|CAR15905.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli UMN026] gi|222036033|emb|CAP78778.1| Inner membrane protein yjgP [Escherichia coli LF82] gi|226901848|gb|EEH88107.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|227836258|gb|EEJ46724.1| inner membrane protein [Escherichia coli 83972] gi|238860249|gb|ACR62247.1| conserved inner membrane protein [Escherichia coli BW2952] gi|242379781|emb|CAQ34608.1| LptF, subunit of LptABCFG ABC transporter [Escherichia coli BL21(DE3)] gi|253326160|gb|ACT30762.1| permease YjgP/YjgQ family protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253976089|gb|ACT41760.1| conserved inner membrane protein [Escherichia coli B str. REL606] gi|253980245|gb|ACT45915.1| conserved inner membrane protein [Escherichia coli BL21(DE3)] gi|254595681|gb|ACT75042.1| conserved inner membrane protein [Escherichia coli O157:H7 str. TW14359] gi|257762239|dbj|BAI33736.1| inner membrane protein [Escherichia coli O103:H2 str. 12009] gi|257767369|dbj|BAI38864.1| inner membrane protein [Escherichia coli O111:H- str. 11128] gi|281181359|dbj|BAI57689.1| conserved hypothetical protein [Escherichia coli SE15] gi|281603540|gb|ADA76524.1| hypothetical protein SFxv_4611 [Shigella flexneri 2002017] gi|290765546|gb|ADD59507.1| Inner membrane protein yjgP [Escherichia coli O55:H7 str. CB9615] gi|291321017|gb|EFE60459.1| lipopolysaccharide export system permease lptF [Escherichia coli B088] gi|291429801|gb|EFF02815.1| lipopolysaccharide export system permease lptF [Escherichia coli FVEC1412] gi|291430479|gb|EFF03477.1| lipopolysaccharide export system permease lptF [Escherichia coli B185] gi|291472232|gb|EFF14714.1| conserved hypothetical protein [Escherichia coli B354] gi|294490862|gb|ADE89618.1| putative permease [Escherichia coli IHE3034] gi|298280746|gb|EFI22247.1| lipopolysaccharide export system permease lptF [Escherichia coli FVEC1302] gi|300298211|gb|EFJ54596.1| putative inner membrane protein [Escherichia coli MS 185-1] gi|300305971|gb|EFJ60491.1| putative inner membrane protein [Escherichia coli MS 200-1] gi|300316134|gb|EFJ65918.1| putative inner membrane protein [Escherichia coli MS 175-1] gi|300356989|gb|EFJ72859.1| putative inner membrane protein [Escherichia coli MS 198-1] gi|300396609|gb|EFJ80147.1| putative inner membrane protein [Escherichia coli MS 69-1] gi|300402052|gb|EFJ85590.1| putative inner membrane protein [Escherichia coli MS 84-1] gi|300410965|gb|EFJ94503.1| putative inner membrane protein [Escherichia coli MS 45-1] gi|300419817|gb|EFK03128.1| putative inner membrane protein [Escherichia coli MS 182-1] gi|300450449|gb|EFK14069.1| putative inner membrane protein [Escherichia coli MS 116-1] gi|300526257|gb|EFK47326.1| putative inner membrane protein [Escherichia coli MS 119-7] gi|300528918|gb|EFK49980.1| putative inner membrane protein [Escherichia coli MS 107-1] gi|300840036|gb|EFK67796.1| putative inner membrane protein [Escherichia coli MS 124-1] gi|301078221|gb|EFK93027.1| putative inner membrane protein [Escherichia coli MS 146-1] gi|305851183|gb|EFM51638.1| Inner membrane protein yjgP [Escherichia coli NC101] gi|307556431|gb|ADN49206.1| putative membrane protein YjgP [Escherichia coli ABU 83972] gi|307629337|gb|ADN73641.1| Inner membrane protein yjgP [Escherichia coli UM146] gi|308123188|gb|EFO60450.1| putative inner membrane protein [Escherichia coli MS 145-7] gi|309704765|emb|CBJ04116.1| putative permease [Escherichia coli ETEC H10407] gi|312948914|gb|ADR29741.1| inner membrane protein [Escherichia coli O83:H1 str. NRG 857C] gi|315255620|gb|EFU35588.1| putative inner membrane protein [Escherichia coli MS 85-1] gi|315288386|gb|EFU47784.1| putative inner membrane protein [Escherichia coli MS 110-3] gi|315293628|gb|EFU52980.1| putative inner membrane protein [Escherichia coli MS 153-1] gi|315298978|gb|EFU58232.1| putative inner membrane protein [Escherichia coli MS 16-3] gi|320639018|gb|EFX08664.1| lipopolysaccharide ABC transporter permease LptF [Escherichia coli O157:H7 str. G5101] gi|320644388|gb|EFX13453.1| lipopolysaccharide ABC transporter permease LptF [Escherichia coli O157:H- str. 493-89] gi|320649705|gb|EFX18229.1| lipopolysaccharide ABC transporter permease LptF [Escherichia coli O157:H- str. H 2687] gi|320655102|gb|EFX23063.1| lipopolysaccharide ABC transporter permease LptF [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320660608|gb|EFX28069.1| lipopolysaccharide ABC transporter permease LptF [Escherichia coli O55:H7 str. USDA 5905] gi|320665535|gb|EFX32581.1| lipopolysaccharide ABC transporter permease LptF [Escherichia coli O157:H7 str. LSU-61] gi|323380352|gb|ADX52620.1| permease YjgP/YjgQ family protein [Escherichia coli KO11] gi|323935383|gb|EGB31731.1| inner membrane protein yjgP [Escherichia coli E1520] gi|323950670|gb|EGB46548.1| inner membrane protein yjgP [Escherichia coli H252] gi|323955547|gb|EGB51311.1| inner membrane protein yjgP [Escherichia coli H263] gi|323965650|gb|EGB61104.1| inner membrane protein yjgP [Escherichia coli M863] gi|323975396|gb|EGB70497.1| inner membrane protein yjgP [Escherichia coli TW10509] gi|324013725|gb|EGB82944.1| putative inner membrane protein [Escherichia coli MS 60-1] gi|324019238|gb|EGB88457.1| putative inner membrane protein [Escherichia coli MS 117-3] gi|324118822|gb|EGC12714.1| inner membrane protein yjgP [Escherichia coli E1167] gi|331035985|gb|EGI08223.1| inner membrane protein YjgP [Escherichia coli H736] gi|331040788|gb|EGI12946.1| inner membrane protein YjgP [Escherichia coli M605] gi|331046449|gb|EGI18539.1| inner membrane protein YjgP [Escherichia coli M718] gi|331051884|gb|EGI23923.1| inner membrane protein YjgP [Escherichia coli TA206] gi|331056981|gb|EGI28975.1| inner membrane protein YjgP [Escherichia coli TA143] gi|331071247|gb|EGI42604.1| inner membrane protein YjgP [Escherichia coli TA280] gi|331071862|gb|EGI43198.1| inner membrane protein YjgP [Escherichia coli H591] gi|331081502|gb|EGI52663.1| inner membrane protein YjgP [Escherichia coli H299] gi|332103405|gb|EGJ06751.1| conserved hypothetical protein [Shigella sp. D9] Length = 366 Score = 82.0 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 48/361 (13%), Positives = 131/361 (36%), Gaps = 19/361 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ +I ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + + + + + + +F+ R Sbjct: 122 PWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKG 181 Query: 183 T--HKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F+ Y + Sbjct: 182 NARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L N + + R+E + R+T + L+ Sbjct: 242 DPNDTDQMDMRTLWNTDTD----------RARAELNWRITLVFTVFMMALM---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ ++ + ++ + F + + + P L+++ + + L ++ Sbjct: 289 VNPRQGRVLSMLPAMLLYLLFFLIQTSLKSNGGK-GKLDPTLWMWTVNLIYLALAIVLNL 347 Query: 358 Y 358 + Sbjct: 348 W 348 >gi|85374866|ref|YP_458928.1| permease [Erythrobacter litoralis HTCC2594] gi|84787949|gb|ABC64131.1| predicted permease [Erythrobacter litoralis HTCC2594] Length = 365 Score = 81.6 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 40/321 (12%), Positives = 101/321 (31%), Gaps = 5/321 (1%) Query: 37 NLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSR 96 +++ LL +G +P ++ P+ + T L ++N+N+E++ + G S Sbjct: 45 EILAVEGNGQGELLTYAGLRVPQLVQRFLPYSVLLATIITLIALNQNSEVIAMKAAGLSA 104 Query: 97 ITLIKPVLFLAILLSIFLFISENIIEPKCRS--TIKQLSAKAQLALTFSYLEENLFFRLD 154 ++ P+L A L+++ F + + + + + + Sbjct: 105 HQVLAPLLLTAGLVALVSFGFNERVVTRATATLKAWEATEFGAVPPDSDVKANVYITDGT 164 Query: 155 DDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI 214 + L + + G R ++ S L + Sbjct: 165 NILTARTVAGTGADIRLGDVTWYRRAPTGQIAEQVRAVSASFVDPGWQLEN--PQSFDIT 222 Query: 215 SKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHK 274 + + + + A + + L + ++ R+++ Sbjct: 223 TANTTTSEAMVVGEGLTPAQIELEAIDPDAVPFWRLGSA-IDSYEAIGRRTAELRAKWWH 281 Query: 275 RLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY 334 +L+ L + L+ VAA A Q I + L ++ V + + P Sbjct: 282 KLSGPLSAFLMPLLGAVAAFGLARSGQLFIRAVIGMGLGFAYFVVDNAALAMGSFGGYPP 341 Query: 335 YIPILYLFLFCISSIFLLMIK 355 ++ FL + ++I+ Sbjct: 342 FLAAWAPFLLFLLVGETVLIR 362 >gi|118602882|ref|YP_904097.1| permease YjgP/YjgQ family protein [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567821|gb|ABL02626.1| permease YjgP/YjgQ family protein [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 360 Score = 81.6 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 121/357 (33%), Gaps = 1/357 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI++ + L + I L+ + + + ++ + K IP V Sbjct: 1 MKILDRYIVKTMAFYTSAVMLVWLGIYAFFNFLEEVTFIGQANYTVFEVTKYVISDIPAV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + + + L + ++L++I + G S + + V+ A++ + + Sbjct: 61 VYSYSSVIILLGSLLALGHLASTSQLVVIRSAGVSIMQISNIVVRAALMFIAIVIFIGEL 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + L AKA ++ + + + ++ + I Sbjct: 121 VTPITIEYAESLRAKALGENITFKNQQGFWLKDSELFIHVKKNFDGKSFQDVTLIKLRAP 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 I ++ S + D + + K S F+ Y++Q L Sbjct: 181 DTLDSIVHSDSAISNGDNLELSQSIHYQFGKDGNLTTFSENNFEKYSVQVSFNKKLIENL 240 Query: 241 KANDQNLSFL-LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 K + + LS L + + E +KRL + + + L S++ Sbjct: 241 KKDPRELSTWHLYQQIRFLTINHLAADIFEVEIYKRLMKPITLIAMILFSMLFVFGSLRD 300 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 K + + +S+ F + ++ +++ L + ++ L+ KK Sbjct: 301 ASLGKNIFLGLMMSLFFELASRIGGVLSLRFDYNHFLSASIPTLLMLVFVWALLKKK 357 >gi|312795336|ref|YP_004028258.1| hypothetical protein RBRH_03152 [Burkholderia rhizoxinica HKI 454] gi|312167111|emb|CBW74114.1| Hypothetical membrane spanning protein [Burkholderia rhizoxinica HKI 454] Length = 382 Score = 81.6 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 43/379 (11%), Positives = 111/379 (29%), Gaps = 25/379 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y+ + + +F + + ++ +N V + + P+ Sbjct: 1 MRLYERYLAKQVYLTFAFILFAFSGLFFFFDLISELNAVGHGNYKFSYAVLRVMLQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M ++E I +G S + +L + + + + F+ I Sbjct: 61 FYEIIPVAALISAIYVFAQMAASSEFTIFRVSGLSTHRALGSLLKIGVPIVVLTFVIGEI 120 Query: 121 IEPKCRSTIKQLS---------AKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQ 171 I P +++ + Q + ++ + + P+ T+ Sbjct: 121 IGPYTDQLSERVRLEALGSSVSSNFQSGVWVKDTVPGNGATAQVTRFVNVGELKPDATIS 180 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHR--------------KSPISKD 217 + I + + +L + +P+ K Sbjct: 181 NVRIYEFDSQFRLADVRTAQSGRYMRPGQWLLKGVTETQLHDVAPAAATAKDVLNPVYKS 240 Query: 218 ISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLT 277 + + + +++L A D+ L + + + Y +++ Sbjct: 241 AQVSMPEYPMRSELTPQILSVLLVAPDRMSMTNLFSYVQHLRENHQDAQRYVIALWRKVL 300 Query: 278 QWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP 337 ++ ++S+ A I L +SF +F I + N + P Sbjct: 301 YPFAVLVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLFNTLFSHIGTL--NTWPAP 358 Query: 338 ILYLFLFCISSIFLLMIKK 356 + I L + Sbjct: 359 LTAATPGLIYLALGLFALR 377 >gi|194437844|ref|ZP_03069939.1| putative permease [Escherichia coli 101-1] gi|256025197|ref|ZP_05439062.1| hypothetical protein E4_17633 [Escherichia sp. 4_1_40B] gi|260858413|ref|YP_003232304.1| inner membrane protein [Escherichia coli O26:H11 str. 11368] gi|301325194|ref|ZP_07218718.1| putative inner membrane protein [Escherichia coli MS 78-1] gi|331671169|ref|ZP_08372002.1| inner membrane protein YjgP [Escherichia coli TA271] gi|194423340|gb|EDX39332.1| putative permease [Escherichia coli 101-1] gi|257757062|dbj|BAI28564.1| inner membrane protein [Escherichia coli O26:H11 str. 11368] gi|300847955|gb|EFK75715.1| putative inner membrane protein [Escherichia coli MS 78-1] gi|323945994|gb|EGB42032.1| inner membrane protein yjgP [Escherichia coli H120] gi|323970485|gb|EGB65744.1| inner membrane protein yjgP [Escherichia coli TA007] gi|331061758|gb|EGI33684.1| inner membrane protein YjgP [Escherichia coli TA271] Length = 366 Score = 81.6 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 48/361 (13%), Positives = 131/361 (36%), Gaps = 19/361 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ +I ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + + + + + + +F+ R Sbjct: 122 PWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKG 181 Query: 183 T--HKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F+ Y + Sbjct: 182 NARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L N + + R+E + R+T + L+ Sbjct: 242 DPNDTDQMDMCTLWNTDTD----------RARAELNWRITLVFTVFMMALM---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ ++ + ++ + F + + + P L+++ + + L ++ Sbjct: 289 VNPRQGRVLSMLPAMLLYLLFFLIQTSLKSNGGK-GKLDPTLWMWTVNLIYLALAIVLNL 347 Query: 358 Y 358 + Sbjct: 348 W 348 >gi|118497255|ref|YP_898305.1| membrane protein of unknown function [Francisella tularensis subsp. novicida U112] gi|194323557|ref|ZP_03057334.1| putative permease, YjgP/YjgQ family [Francisella tularensis subsp. novicida FTE] gi|208779048|ref|ZP_03246394.1| putative permease, YjgP/YjgQ family [Francisella novicida FTG] gi|254372628|ref|ZP_04988117.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. novicida GA99-3549] gi|118423161|gb|ABK89551.1| conserved membrane protein of unknown function [Francisella novicida U112] gi|151570355|gb|EDN36009.1| permease YjgP/YjgQ family protein [Francisella novicida GA99-3549] gi|194322412|gb|EDX19893.1| putative permease, YjgP/YjgQ family [Francisella tularensis subsp. novicida FTE] gi|208744848|gb|EDZ91146.1| putative permease, YjgP/YjgQ family [Francisella novicida FTG] Length = 360 Score = 81.6 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 54/358 (15%), Positives = 120/358 (33%), Gaps = 12/358 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 E Y + I +F LFI+ I +++ S ++ ++K IP + Sbjct: 2 ILEKYYNKDIVNTFTSITLFIISIVSANLLIRLFQEAYSQGLGIDSIVKFVILTIPENVS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + N E+ + G + + ++K L + L+I I+ + Sbjct: 62 LVAPIAIFLAIVICFGKYFANNEMFVTLAGGITWMQIVKNTLKPVVALTIITLITVMYLN 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + T+ A S + + + D I I + N ++ Sbjct: 122 PLSKQTLDIYRASLSAKALLSSITDQKIIKAPDGKIIYIGNKSGNTLSDVFLYQNTPQDG 181 Query: 183 THKIYYAQSGSIDLDRQAII--LNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 +K+ A + I D+ A + ++ K+ + + S K + Sbjct: 182 EYKVMTAPTAKIVSDKTAAYIDFMNVNIYTKNSQNSEYSYDNAKKAIYTIFDNSDRDYNH 241 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 D+ L Y++EF R+ + ++ S++A L Sbjct: 242 DRVDR----LYMHTLIENFNDKTNGTAYKAEFFGRINNAISVIVS---SLLALALCRLRP 294 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMIKK 356 ++ K + S+ + ++ + I+ + N + +L + + I+K Sbjct: 295 RQNKYAKLLPSVVV-LAIYLCTNMFINTLMANGSVPVWIGFWLPHIFFTIFAVRTIRK 351 >gi|114798132|ref|YP_760297.1| putative permease [Hyphomonas neptunium ATCC 15444] gi|114738306|gb|ABI76431.1| putative permease [Hyphomonas neptunium ATCC 15444] Length = 351 Score = 81.6 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 47/361 (13%), Positives = 112/361 (31%), Gaps = 15/361 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 Y+ + L++ +V + V+ L + + + ++ +P + Sbjct: 3 SRLSRYLSWLFLQRLLVTVFALVALLGVLDALSNADKLPA-GAGFEGQMRYMWLRLPALF 61 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + F F + S+ R EL+ I G S ++ ++ + L ++ + + Sbjct: 62 DRIVVFAFLLAALLTYASLIRRNELVAISAAGISVFGQMRTLIPVVFLTAVAAAFIIDTV 121 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P ++ L EE + + K L GI I + Sbjct: 122 GPPASRSLLAWLGPEALQEDAQVPEELWLSDGKFLIEL---KSMQAEELTGITIFERNAE 178 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + D + G+ + + M F +T + ++ Sbjct: 179 GAVVAITTAETARPADGGWALSGTGQRR---FDGEPPTDMTF--WTSPQTPESLQLLLSP 233 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 D +S L+ + + Y R L V F L+++ + R+ Sbjct: 234 PRDLAISNLIALSEMRGS-GSRPSGAYELWALNRFLLPLTAVGFLLLAVPVM--QVYGRR 290 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMIKKKYT 359 + +++ F + I+ + +N PIL L + + + + ++ Sbjct: 291 SNADIAVAAGVAVGFF-YMVVDGILKTLAENGSISPILAVALPILALFLGSMWLALEREI 349 Query: 360 K 360 + Sbjct: 350 R 350 >gi|329850878|ref|ZP_08265723.1| hypothetical protein ABI_37970 [Asticcacaulis biprosthecum C19] gi|328841193|gb|EGF90764.1| hypothetical protein ABI_37970 [Asticcacaulis biprosthecum C19] Length = 380 Score = 81.6 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 47/362 (12%), Positives = 111/362 (30%), Gaps = 16/362 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTV 60 E YIL+ F + + + + +I ++ V++ +L + P+ Sbjct: 19 SRLETYILQTCVAMFASALMVVSALILLINYVEISRSVAARADLGGLEVLVMLFQRSPSA 78 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ PF F + ++NR +EL+ + G S + P A I N Sbjct: 79 ILILLPFAFLFGSLFAFVNLNRRSELIAMRAAGVSAWRFVLPATVSAFAFGILTIGVLNP 138 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP------NNTLQGIF 174 + + ++ A+ E + D D + I + + Sbjct: 139 VASHLQDVYERKVVAAEAFAPTDPAEAIYLRQGDSDRQVVIRADGQASAQIGHLRGVTFW 198 Query: 175 IVDSRDTQTHKIYYAQSGS-IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 I + L + L D + ++ +++ TL + Sbjct: 199 IFTTDRRGAPSFIERVDAREAILRPGSWQLKDAREYTLDKPAQFYNVL-----TLSSNLD 253 Query: 234 NSSTIVLKANDQNLSFLLNP-NPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 A+ Q++ F P +Y + H+ L+ L + V Sbjct: 254 PQKAFKRYASTQSVPFWRLPGLIRQNQISGFSTTSYELKLHQLLSTPLMFAAMTALGAVF 313 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 + L+R + +S+ F +F+ + + + ++ + + Sbjct: 314 SL--RLMRLGGLTILVTSGVSLGFVIFFVNQLFASMGKADVIPAALAGWSPAVLAMLGAM 371 Query: 353 MI 354 + Sbjct: 372 TL 373 >gi|16125408|ref|NP_419972.1| hypothetical protein CC_1156 [Caulobacter crescentus CB15] gi|221234151|ref|YP_002516587.1| hypothetical protein CCNA_01214 [Caulobacter crescentus NA1000] gi|13422474|gb|AAK23140.1| hypothetical protein CC_1156 [Caulobacter crescentus CB15] gi|220963323|gb|ACL94679.1| hypothetical membrane spanning protein [Caulobacter crescentus NA1000] Length = 406 Score = 81.6 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 54/328 (16%), Positives = 108/328 (32%), Gaps = 11/328 (3%) Query: 37 NLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSR 96 +++S S+ + +++ L+P L + P F + V+ ++ +E+ + +G S Sbjct: 47 DVLSQSSARFGYVAQLAANLVPHYLGLALPVAFFVALFIVIVKLSDGSEIDALLASGQSL 106 Query: 97 ITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD 156 + P + + +LLS+F I ++P R + + A A L F Sbjct: 107 ERIAAPFVAVGVLLSVFSIIVFGYMQPYSRYAYRAVMHAAVNAGWNGRLAGGAFIDDKGS 166 Query: 157 LYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQ----AIILNDGEVHRKS 212 L S L +FI +I A S + +D + L DG Sbjct: 167 LLTADSADIAGQRLTRVFIRRLDAKGQEEIITAASADLKMDPDGKTITMDLRDGRRIAHD 226 Query: 213 PISKDISIMKFKSYTLQTESAN----SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETY 268 + F S T QT + + + L + + T Sbjct: 227 AYGT-YRNLAFTSLTTQTPLSAAAVLLRDRGGDERELTMGELRREAKSPDPVVSK--GTL 283 Query: 269 RSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHK 328 SEF+ RL + F L++ + + + L + Sbjct: 284 LSEFYGRLARAAFLPFLPLLAFPLGLASKRGNRAPGLIMAGLLLLAFQHSLLLGQGMAKA 343 Query: 329 IEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + + + LF S++L + + Sbjct: 344 GKADAFAAIWIPFTLFAALSVWLFVGSR 371 >gi|238787644|ref|ZP_04631442.1| Inner membrane protein yjgP [Yersinia frederiksenii ATCC 33641] gi|238724431|gb|EEQ16073.1| Inner membrane protein yjgP [Yersinia frederiksenii ATCC 33641] Length = 364 Score = 81.6 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 53/364 (14%), Positives = 127/364 (34%), Gaps = 19/364 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFSQKLVRILGAAVDGEIPTNLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G + +LI L LA++ S ++ + Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGMGKKSLIMAALILALVTSALAAVNTIWLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+ + + L F D +F+ R Sbjct: 122 PWSSKHQDEVLTDARANPSLAALAGGQFKSSTDGNSALFIGNVSGKEFNRVFLAQLRPNG 181 Query: 183 T--HKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q +ILN G + + + +D I F Y Sbjct: 182 NQRPSVVVADSGHMTERPDGSQVVILNKGTRYEGTALLRDFRITDFVDYQTIIGHQEVQQ 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 A + L + + R+EFH RLT + VI L+ Sbjct: 242 DNSVAEQMTMRQLWHATEPDA----------RAEFHWRLTLIVSVVIMALL---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ ++ + ++ + F + + + P+++L+ + + L ++ Sbjct: 289 VNPRQGRVLSMLPAMLLYLIFFLLQTSLRSNASK-GKLDPLVWLWAVNGAYLALAVLLNL 347 Query: 358 YTKI 361 + + Sbjct: 348 WDSL 351 >gi|194426540|ref|ZP_03059094.1| putative permease [Escherichia coli B171] gi|300928087|ref|ZP_07143635.1| putative inner membrane protein [Escherichia coli MS 187-1] gi|194415279|gb|EDX31547.1| putative permease [Escherichia coli B171] gi|300463884|gb|EFK27377.1| putative inner membrane protein [Escherichia coli MS 187-1] gi|323940179|gb|EGB36373.1| inner membrane protein yjgP [Escherichia coli E482] Length = 366 Score = 81.6 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 49/361 (13%), Positives = 131/361 (36%), Gaps = 19/361 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ +I I+ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAINVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + + + + + + +F+ R Sbjct: 122 PWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKG 181 Query: 183 T--HKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F+ Y + Sbjct: 182 NARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L N + + R+E + R+T + L+ Sbjct: 242 DPNDTDQMDMRTLWNTDTD----------RARAELNWRITLVFTVFMMALM---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ ++ + ++ + F + + + P L+++ + + L ++ Sbjct: 289 VNPRQGRVLSMLPAMLLYLLFFLIQTSLKSNGGK-GKLDPTLWMWTVNLIYLALAIVLNL 347 Query: 358 Y 358 + Sbjct: 348 W 348 >gi|251791280|ref|YP_003006001.1| permease YjgP/YjgQ family protein [Dickeya zeae Ech1591] gi|247539901|gb|ACT08522.1| permease YjgP/YjgQ family protein [Dickeya zeae Ech1591] Length = 370 Score = 81.6 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 51/361 (14%), Positives = 133/361 (36%), Gaps = 19/361 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETFKSQVAILFILLLIFFCQKLVRILGAAVDGDIPTNLVLSLLGLGVPQMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ G S+ L+K L L++L + + + Sbjct: 62 LILPLSLFLGLLMTFGRLYAESEITVMHACGLSKSVLLKAALLLSLLTASLATANVLWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV--DSRD 180 P ++ A+A+ + L E F + D + + + +F+ R+ Sbjct: 122 PWSSRHQDEVLAQARANPGMASLAEGQFQQTQDGNSVLFVGKVNSGDFERVFLAQLHPRE 181 Query: 181 TQTHKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A G++ Q + L+ G + + + +D I F +Y + Sbjct: 182 NTRPSVVVADRGTVAARGDGSQVVTLSKGTRYEGTAMLRDFRITDFINYQAIVGYQPVAV 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +L L + R+EFH RLT L ++ ++ Sbjct: 242 DPSNVEQMSLKTLWESSDIAA----------RAEFHWRLTLILSVLVMAVM---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ ++ + ++ + F S + + P+++++L + + L +I Sbjct: 289 VNPRQGRVLSMLPAMLLYLVFFLLQSSLRSNAGK-GKLDPMVWMWLTNLVYLALAVILNL 347 Query: 358 Y 358 + Sbjct: 348 W 348 >gi|323960302|gb|EGB55943.1| inner membrane protein yjgP [Escherichia coli H489] Length = 366 Score = 81.6 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 48/361 (13%), Positives = 131/361 (36%), Gaps = 19/361 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ +I ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + + + + + + +F+ R Sbjct: 122 PWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKG 181 Query: 183 T--HKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F+ Y + Sbjct: 182 NARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L N + + R+E + R+T + L+ Sbjct: 242 DPNDTDQMDMRTLWNTDTD----------RARAELNWRITLVFTVFMMALM---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ ++ + ++ + F + + + P L+++ + + L ++ Sbjct: 289 VNPRQGRVLSMLPAMLLYLLFFLIQTSLKSNGGK-GKLDPTLWMWTVNLIYLALAIVLNL 347 Query: 358 Y 358 + Sbjct: 348 W 348 >gi|332876989|ref|ZP_08444742.1| permease, YjgP/YjgQ family [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332685097|gb|EGJ57941.1| permease, YjgP/YjgQ family [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 491 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 52/304 (17%), Positives = 113/304 (37%), Gaps = 22/304 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL +FL + +V I I I+ ++ L I+ K Y IP + Sbjct: 1 MKILDRYILTQFLTNFLGALSILVLIFVFHTIFTYIDELAGRGLELWIIGKFLIYFIPQL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P++ P + + + N E + +G S + ++ P++ L LLSI F N Sbjct: 61 IPIIMPLAVVISSIMTFGAFAENYEFAAMKASGISLMRVMLPLIVLMALLSIGTFFLANN 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + L + + E +F + +D+ IK++K + +N ++ + Sbjct: 121 VIPVAYREVYTLRSNIAKVKPAMAISEGVFSNIGEDISIKVAKKSGDNDQFLHNVLIHKK 180 Query: 181 TQTHKIYYA--------QSGSIDLDRQAIILNDGEVHRKSPISKD-------ISIMKFKS 225 T ++ + + +IL DG + + + + F+ Sbjct: 181 TPDRVNRTVIFAKKGELKTAKTNSNFLQLILEDGTYYEDIKTNSYEAQERLPFAKVHFQK 240 Query: 226 YTLQTESANSSTIVLKAND-------QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQ 278 Y + + ++ + + N+ L + + + Y + +R Sbjct: 241 YIINLDLSHLNNVDFNEKTDATTYRMMNVGQLGYAIDSLRTDFKQNITDYGNNMFRRTGF 300 Query: 279 WLFP 282 ++ P Sbjct: 301 YIAP 304 Score = 40.8 bits (93), Expect = 0.38, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 36/98 (36%), Gaps = 4/98 (4%) Query: 252 NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFIS 311 N+ YR +L+ + + + + ++ A A +R+ P+ ++ Sbjct: 356 EYRQNDLEYRYKLMNLHILNLSDKFALTVACFVLFFVA---APLGAFIRKGGIGLPLVVA 412 Query: 312 LSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 I F ++ + I +N P L ++ + + Sbjct: 413 -MIVFLAYYFIGMFMKNIAENNTINPALAPWIPALILL 449 >gi|188495933|ref|ZP_03003203.1| putative permease [Escherichia coli 53638] gi|188491132|gb|EDU66235.1| putative permease [Escherichia coli 53638] Length = 366 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 48/361 (13%), Positives = 131/361 (36%), Gaps = 19/361 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ +I ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + + + + + + +F+ R Sbjct: 122 PWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKG 181 Query: 183 T--HKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F+ Y + Sbjct: 182 NARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGYQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L N + + R+E + R+T + L+ Sbjct: 242 DPNDTDQMDMRTLWNTDTD----------RARAELNWRITLVFTVFMMALM---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ ++ + ++ + F + + + P L+++ + + L ++ Sbjct: 289 VNPRQGRVLSMLPAMLLYLLFFLIQTSLKSNGGK-GKLDPTLWMWTVNLIYLALAIVLNL 347 Query: 358 Y 358 + Sbjct: 348 W 348 >gi|82779327|ref|YP_405676.1| hypothetical protein SDY_4285 [Shigella dysenteriae Sd197] gi|81243475|gb|ABB64185.1| conserved hypothetical protein [Shigella dysenteriae Sd197] Length = 366 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 48/361 (13%), Positives = 131/361 (36%), Gaps = 19/361 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ +I ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAIILAVFTAIVAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + + + + + + +F+ R Sbjct: 122 PWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKG 181 Query: 183 T--HKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F+ Y + Sbjct: 182 NARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L N + + R+E + R+T + L+ Sbjct: 242 DPNDTDQMDMRTLWNTDTD----------RARAELNWRITLVFTVFMMALM---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ ++ + ++ + F + + + P L+++ + + L ++ Sbjct: 289 VNPRQGRVLSMLPAMLLYLLFFLIQTSLKSNGGK-GKLDPTLWMWTVNLIYLALAIVLNL 347 Query: 358 Y 358 + Sbjct: 348 W 348 >gi|167646491|ref|YP_001684154.1| permease YjgP/YjgQ family protein [Caulobacter sp. K31] gi|167348921|gb|ABZ71656.1| permease YjgP/YjgQ family protein [Caulobacter sp. K31] Length = 367 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 42/358 (11%), Positives = 95/358 (26%), Gaps = 12/358 (3%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTVLP 62 E Y+L+ S + + + +I + V + LL ++ P + Sbjct: 7 IERYVLKKTLGSLAAALAVVSVLVMLIAFVDISKSVGTRAEVGFGELLFLTVLQAPATIL 66 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++TPF F T +NR +EL+ + G S I P A ++ + N + Sbjct: 67 LLTPFIFLFGTLGAFVGLNRRSELIAMRAAGVSAWRFIMPAAVAAFVMGLLTLTLLNPLT 126 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQ-------GIFI 175 + + S + + DD + I + +F+ Sbjct: 127 AAMSAQFETSRNAMMENYLKSAPKGLWLRQGDDKTQVVIRARARDQINGAVRLRGVSLFV 186 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + + G S + + + Sbjct: 187 YAVQPNGALQFSQRIEADEARLEPGFWQLSGVRVAMPGAGAIRSETY--TLPSNLDDRTA 244 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 S + L + +R + L L +++ + + Sbjct: 245 SERFSNPQAIAVWRLPETIKRTEAAGFSSI-PFRLRLQQVLATPLLFAAMSVLAAAFSLR 303 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGF-SYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 + + ++L +F F + P + ++ + LL Sbjct: 304 LMRLGGLAGLAGAGVTLGFAFFFFNELCGALGKADVLTPAMAAWTPPIVALLAGLTLL 361 >gi|74314740|ref|YP_313159.1| hypothetical protein SSON_4446 [Shigella sonnei Ss046] gi|254037284|ref|ZP_04871361.1| conserved hypothetical protein [Escherichia sp. 1_1_43] gi|300916357|ref|ZP_07133099.1| putative inner membrane protein [Escherichia coli MS 115-1] gi|300935933|ref|ZP_07150886.1| putative inner membrane protein [Escherichia coli MS 21-1] gi|73858217|gb|AAZ90924.1| conserved hypothetical protein [Shigella sonnei Ss046] gi|226840390|gb|EEH72392.1| conserved hypothetical protein [Escherichia sp. 1_1_43] gi|284924431|emb|CBG37556.1| putative permease [Escherichia coli 042] gi|300416317|gb|EFJ99627.1| putative inner membrane protein [Escherichia coli MS 115-1] gi|300458869|gb|EFK22362.1| putative inner membrane protein [Escherichia coli MS 21-1] Length = 366 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 48/361 (13%), Positives = 130/361 (36%), Gaps = 19/361 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ +I ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + + + + + + +F+ R Sbjct: 122 PWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKG 181 Query: 183 T--HKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F+ Y Sbjct: 182 NARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVVL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L N + + R+E + R+T + L+ Sbjct: 242 DPNDTDQMDMRTLWNTDTD----------RARAELNWRITLVFTVFMMALM---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ ++ + ++ + F + + + P L+++ + + L ++ Sbjct: 289 VNPRQGRVLSMLPAMLLYLLFFLIQTSLKSNGGK-GKLDPTLWMWTVNLIYLALAIVLNL 347 Query: 358 Y 358 + Sbjct: 348 W 348 >gi|319955107|ref|YP_004166374.1| permease yjgp/yjgq family protein [Cellulophaga algicola DSM 14237] gi|319423767|gb|ADV50876.1| permease YjgP/YjgQ family protein [Cellulophaga algicola DSM 14237] Length = 493 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 43/294 (14%), Positives = 99/294 (33%), Gaps = 13/294 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + Y+L +F S ++ I I I+ ++ + I+LK Y++P + Sbjct: 1 MRILDRYLLSRFLYNFFSSFAILMLIFVFQTIWLFIDDLAGRGLDVMIILKFLFYIMPNL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + + S+ N E + +G S ++P++ +L + +F N Sbjct: 61 MEKVLPLTVLLASILTFGSIAENYEFAAMKASGISLQRSMRPLIIFVCILGVVVFYFANS 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFR-LDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P I L + + E F ++ +K+ + +N ++ R Sbjct: 121 VIPASEQKIYNLRKNIGQVKPSTAIVEGAFSDLEGTNMNMKVDRKYGDNDRFLENVIIHR 180 Query: 180 DTQTHKIYYAQSGSIDL-------DRQAIILNDGEVHR-----KSPISKDISIMKFKSYT 227 + D ++L DG + KS ++ K Sbjct: 181 KSDNSINNTVIKAKTGELVSSEGSDILKLVLRDGHYYEDITKKKSTENRKYPFAKSSFEI 240 Query: 228 LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLF 281 S V D++++ N + ++ + ++ ++ Sbjct: 241 YTINQDISKLDVNLEEDRSVTTDKMKNVMRLIKDADSIKKNNLIIVETFSKSIY 294 Score = 48.1 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 21/179 (11%), Positives = 64/179 (35%), Gaps = 10/179 (5%) Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL-QTESANSSTIVLKA 242 K Y ++G+ + + L++ S + + F + + + +L A Sbjct: 290 SKSIYNRAGAFAILSKKDSLDNANFKPLSKDALLLQKAMFDTLNIVSLYPEYQKSQILNA 349 Query: 243 NDQNLSFLL---NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + +L + + R ++ + HK+ L ++ + A A++ Sbjct: 350 AKNTTTNILASIRSKKDELDKRYKIYNMHIVSLHKKFALGLSCIVLFFVG---APLGAII 406 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF--LFCISSIFLLMIKK 356 R+ P+ +++ + F ++ ++ PI+ + + + + + K+ Sbjct: 407 RKGGLGVPMVVAILL-FLTYYFIGVFSENYAKDGNMSPIIGAWTSTLIMLPLGVFLTKR 464 >gi|313672806|ref|YP_004050917.1| permease yjgp/yjgq family protein [Calditerrivibrio nitroreducens DSM 19672] gi|312939562|gb|ADR18754.1| permease YjgP/YjgQ family protein [Calditerrivibrio nitroreducens DSM 19672] Length = 345 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 58/351 (16%), Positives = 132/351 (37%), Gaps = 14/351 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YIL I F++S +F +FI +++ +LV S I+++ + +P+ Sbjct: 1 MNKLSKYILEEIYPIFIISNIFFIFILLFDKVVDLTDLVFSKNVPTIIIIETFIFYLPSF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + ++ + EL+++ + G S ++L+KP ++ IL ++ F++ Sbjct: 61 MMVTIPTSALLAVMTAHNRLSSDAELVVMKSLGLSPMSLLKPTIYFGILATLLAFLTSFY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + ++ ++EN F++ + I + K +N I ++D + Sbjct: 121 LLPYGNKYAIYNLKRTVEYVSLKDIKENEFYKEIPSIAIYVKKKVDDNKFLQITLIDEKG 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 A A++ + + ++FK + ++ + Sbjct: 181 GSL---ITAAEADAYQKFGAVVFDLKNGAIIQGKNDRYGKIEFKKFYFVVNVDSNLNREI 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K+ + R Y+ EF KR+ +I L+ + + Sbjct: 238 KSERFMFM-------DELISRFNDGYIYKFEFSKRVALPFSTLIMALLGL---NMGVFFH 287 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQ-NPYYIPILYLFLFCISSIF 350 + + I+L I F + + NPY+ P + +F S+ Sbjct: 288 RANRSINWIIALGIIFSYNVIMFMSENLAGKINPYFAPWIANTIFAFLSLI 338 >gi|269467941|gb|EEZ79676.1| permease [uncultured SUP05 cluster bacterium] Length = 373 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 45/359 (12%), Positives = 118/359 (32%), Gaps = 21/359 (5%) Query: 9 LRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFC 68 +R + + I + + Q++ IN ++ LL + + + +P++ Sbjct: 1 MRNVLVMLSAVFIIIGLVVFGNQLVLVINQSLKEGIPVSDLLPLISFKMIRDVPLILSLS 60 Query: 69 FAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRST 128 + ++ + +++E +++++ G + + + I + IF+ P + Sbjct: 61 LFLAIILSVSRLYKDSEAIVMNSLGLGDKQFMLFIQPIVIAIFIFILFLTTYAVPWSKHQ 120 Query: 129 IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP------NNTLQGIFIVDSRDTQ 182 + + + A FS+++E F D + + ++ IFI + + Sbjct: 121 RNMVMDRTENASEFSFIKEGEFQEFKDGDVVFYASKVKAGGELGQQEMEEIFIYTLSNDE 180 Query: 183 THKIYYAQSGSIDLD---RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + Q+ + L DG + P + I+ F Y L+ + Sbjct: 181 SIITLAKQANKYTDGITKSVYLRLKDGTRYHGFPGDTNKKILNFDLYDLKIIDGDKEKTK 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + ++ SE RL+Q + +I I+ Sbjct: 241 DTIVKVEGQDTFDLFRSDGLKE-------VSELQWRLSQPISVLILS---ILGILLGKSS 290 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY--YIPILYLFLFCISSIFLLMIKK 356 + K + + + +EQ + + ++ L + IF+ + + Sbjct: 291 PRGGKNLGVLFGVVVFILYNNALLVAKSNLEQGSVHPIVGLWWVHLLMVLIIFIFYLYR 349 >gi|326388615|ref|ZP_08210208.1| permease YjgP/YjgQ [Novosphingobium nitrogenifigens DSM 19370] gi|326206866|gb|EGD57690.1| permease YjgP/YjgQ [Novosphingobium nitrogenifigens DSM 19370] Length = 356 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 45/344 (13%), Positives = 107/344 (31%), Gaps = 2/344 (0%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRIN-LVSSSTESLNILLKISGYLIPTVLPMVT 65 YI R + L +V + ++ +L ++++ LL+ P ++ Sbjct: 4 YIARLFAVRIVAVLLMLVLVLQMLDLLSESGHILAAKGNGQMELLRYGMLRTPQLVSRFL 63 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P+ + T L ++N+N+E++ + G S ++ P+ ++ S+F F + + Sbjct: 64 PYSVLLATIITLMTLNQNSEVIAMKAAGLSAHQVLAPLFLVSAAASVFTFTFNERVVVRS 123 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHK 185 +T+K A+ ++ + D + + T + V Sbjct: 124 TATLKAWQDVDYGAVPTDSDVKSNVWLQDGPNIVFAKTISGRGTATRMSEVSWYRRDPTG 183 Query: 186 IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQ 245 + + S ++ + I D+ Sbjct: 184 VVTEIVHAPLATYTHPGWRFDHPTSFDVQSAALTTLPGPKVYASGVEPTQIIIRKTDADR 243 Query: 246 NLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKI 305 L+ + ++ +++ L V+ L+ VAA A + Sbjct: 244 ESITQLSQSIAEIQAAGYRTNELDGKWWHKISGPLSAVLMPLLGSVAAFGLARSGKLFVR 303 Query: 306 HPIFISLSI-SFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 I ++L F V + + +P+ LF + Sbjct: 304 AVIGMALGFAYFVVDNAALAMGNFGGYSPFLAAWSPFLLFLLIG 347 >gi|251771423|gb|EES52002.1| permease YjgP/YjgQ family protein [Leptospirillum ferrodiazotrophum] Length = 377 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 57/370 (15%), Positives = 121/370 (32%), Gaps = 13/370 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+ + F +S L +V + Q L +NL+ + S+ + ++ + P Sbjct: 1 MKIIHRYLFLELLTPFFLSLLVLVILLLTQQALLIMNLLVNKGLSVETVFRLLSMIFPQF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P +T + + E++ +G S L+ P+ A + F Sbjct: 61 LSMIIPVSVLTASTATFHRLASDGEIIAFKASGISLSRLLLPLFLFAAIGFGTNFYLSLK 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD-SR 179 +++ L + ++ F I + K + + G+FI + Sbjct: 121 AMETQGLSLQDLLVRVFQKKLSLAIKPQSFNNFMGRFIIYVEKMPTLSHIDGVFIYQKEK 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVH-RKSPISKDISIMKFKSYTLQTESANSSTI 238 T + +AQSG I +R L H ++F SY L ++ Sbjct: 181 KTGPRTVIFAQSGEILNERHPPGLRLKLSHGTFFQEGSAQQYIRFGSYDLTITGHHTDDS 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + ++ + +P+ P L +K T F + I Sbjct: 241 IRVK---SIDEIRAEIARSPSPDPSLFRALEDR-YKNYTYPFSCFFFAFLGIPYGIYTMR 296 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM----- 353 + +++ + + + ++ K +P + + LL Sbjct: 297 SGRLAGFVFATVTVILFYMMNTIDDLMVSKRLLSPAAAALAPDIVLAALMTALLFMVFHE 356 Query: 354 --IKKKYTKI 361 +K + +I Sbjct: 357 VDVKSRLPRI 366 >gi|194336947|ref|YP_002018741.1| permease YjgP/YjgQ family protein [Pelodictyon phaeoclathratiforme BU-1] gi|194309424|gb|ACF44124.1| permease YjgP/YjgQ family protein [Pelodictyon phaeoclathratiforme BU-1] Length = 441 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 56/286 (19%), Positives = 105/286 (36%), Gaps = 7/286 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL+ SFL + + I+F+ + + ++++ + Sbjct: 1 MKIIDRYILKAHVGSFLFAFVTIIFVLILQFFATFADRFMGKGIGFTAMVELILLQSAWM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + S+ +E+ + +G S L+ PVL +LLS+F+ N+ Sbjct: 61 VGLAAPMAVLVSVVMAFGSLTTTSEMTVFRASGISLYRLMMPVLLAGLLLSLFVERFNNV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSR 179 + P+ K L + L EN F L D I + + + L+GI I D+ Sbjct: 121 VLPEANYYAKSLMVDIARSKPAFGLAENAFSTLVDGYSIFVRSTDEHSKELRGIVIYDAS 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAII----LNDGEVHRK-SPISKDISIMKFKSYTLQTESAN 234 + + A+ G+ID L +GE+H+ P K M F+ + ES+ Sbjct: 181 RSDYKTMVTAEKGTIDFSGDDHYLVMTLFNGEIHQVRQPDHKSYRNMSFQKHRFVFESSG 240 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWL 280 + + + + KR+ L Sbjct: 241 FGFSRSSESRMRSGD-GELSAKELITIGDEFRKRIAASEKRIQMPL 285 Score = 51.5 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 34/98 (34%), Gaps = 4/98 (4%) Query: 251 LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFI 310 L+ N + Y + +HK+ L +F L+ R+ I Sbjct: 328 LDGELKNIEANRNMYNRYMAAYHKKYALSLACFVFVLVGAPLGVLA---RRGGFGVGAAI 384 Query: 311 SLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 SL + F ++W KI + P++ ++L Sbjct: 385 SLFL-FVLYWMLMISGEKIAERGILDPMISMWLANAVM 421 >gi|167585748|ref|ZP_02378136.1| permease YjgP/YjgQ family protein [Burkholderia ubonensis Bu] Length = 382 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 43/358 (12%), Positives = 102/358 (28%), Gaps = 25/358 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ FE Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRLFEKYFARQIYVTFVFILFAFSGLFFFFDLISELNSVGHGNYKFGYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + + L I ++ Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLLKIGVPLVIVTYLIGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF---------FRLDDDLYIKISKYNPNNTLQ 171 + P +++ +A A S + ++ ++ + +P++T+ Sbjct: 121 VGPYADQLSERVRLQALGASVSSNFQSGVWVKDTLAARDNGEQVTRFVNVGSLSPDSTIS 180 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPIS---------------K 216 + I + + +L +PI Sbjct: 181 NVRIYEFDSKFQLQNVRIAQTGRYEAPGHWLLTGVTETELTPIKPIGGQPADALNPVYRS 240 Query: 217 DISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRL 276 + S +++ +L L + + + Y ++L Sbjct: 241 QQVTLPEFRLRSDLTPQILSVLLVSPERMSLINLFR-YIQHLKENQQDTQRYDIALWRKL 299 Query: 277 TQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY 334 + ++S+ A I L +SF + I + P Sbjct: 300 LYPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLLNTLFSHIGTLNTWPA 357 >gi|218702964|ref|YP_002410593.1| hypothetical protein ECIAI39_4734 [Escherichia coli IAI39] gi|218372950|emb|CAR20831.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli IAI39] Length = 366 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 49/361 (13%), Positives = 132/361 (36%), Gaps = 19/361 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + S N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDSDIPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ +I ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + + + + + + +F+ R Sbjct: 122 PWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKG 181 Query: 183 T--HKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F+ Y + Sbjct: 182 NARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L N + + R+E + R+T + L+ Sbjct: 242 DPNDTDQMDMRTLWNTDTD----------RARAELNWRITLVFTVFMMALM---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ ++ + ++ + F + + + P L+++ + + L ++ Sbjct: 289 VNPRQGRVLSMLPAMLLYLLFFLIQTSLKSNGGK-GKLDPTLWMWTVNLIYLALAIVLNL 347 Query: 358 Y 358 + Sbjct: 348 W 348 >gi|88703588|ref|ZP_01101304.1| Predicted permease YjgP/YjgQ family protein [Congregibacter litoralis KT71] gi|88702302|gb|EAQ99405.1| Predicted permease YjgP/YjgQ family protein [Congregibacter litoralis KT71] Length = 362 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 52/353 (14%), Positives = 117/353 (33%), Gaps = 26/353 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLF-IVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPT 59 MK Y+ + L + I + ++ + +S + ILL + Y +P Sbjct: 1 MK-LRGYLAGDVLGHTLAVSSVLL-AIILTGRFVKYLAEAASGKLAAEILLPVMFYRLPG 58 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 L ++ P + + +E++I+ G L L A+L+ + + Sbjct: 59 FLELLLPLGLFIGILMSYGRLYVESEMVILSACGVGPAKLASFTLAPALLIMLVVAGLSL 118 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 ++ P+ + + L Q L F DD + + + + Sbjct: 119 LVTPQGVARSEALLNDPQALQGLQLLAAGRFQPRGDDGTVTYAADIDPEAGELDQVFLYA 178 Query: 180 DTQTHKI------YYAQSGSIDLDRQAII----LNDGEVHRKSPISKDISIMKFKSYTLQ 229 A+ GS+ +D ++ + L DG +P D I++F ++ + Sbjct: 179 PEDRTADTEVAGVTVARRGSVVVDPESGVRYLELRDGYRFSGTPGRADYRIVRFGTFGQR 238 Query: 230 TESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 S + + + LL+ + R+ H RL+ L + L++ Sbjct: 239 LPDTPSMARSEPVDAKPTAALLDSDNAED----------RAALHWRLSVALMVPVVALLA 288 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 + +R + + +L + + + I + + +YL Sbjct: 289 LSL---SKTNHRRGRYIKLAPALLLHLSYLFALASIRTSVAEGDAPAYQMYLL 338 >gi|89891367|ref|ZP_01202873.1| permease YjgP/YjgQ [Flavobacteria bacterium BBFL7] gi|89516398|gb|EAS19059.1| permease YjgP/YjgQ [Flavobacteria bacterium BBFL7] Length = 481 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 86/255 (33%), Gaps = 9/255 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL ++FL + I+FI + I I ++ + + K Y IP + Sbjct: 1 MKILDRYILTSFIKTFLSVFIVIMFILILQAIWLYIKDLAGKDLDMITIAKFMMYTIPVI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+ P + + V +M N E + + G S ++ ++ + L + F N Sbjct: 61 VPLALPLSIILASIMVFGNMAENYEFAAMKSNGISLQRAMRSLMIVVGTLGVTSFFFANT 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P L + + F +L D K ++ ++ Sbjct: 121 VIPWGHFKQGNLRRNIVNSKPAMAIGVGNFNQLGDINIKVDQKTGDRGQYLDNVLIHKKN 180 Query: 181 TQTHKIYYAQ-------SGSIDLDRQAIILNDGEVHR--KSPISKDISIMKFKSYTLQTE 231 + + Y S+ + ++L DG + ++ F T Sbjct: 181 PKRNGNYTVIKSKKGELKSSLKSNIIQLVLTDGNYYDDLFPENAQKRRSSPFVRSYFDTY 240 Query: 232 SANSSTIVLKANDQN 246 + N L D N Sbjct: 241 TLNVDVSGLNNTDLN 255 Score = 41.9 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 16/108 (14%), Positives = 38/108 (35%), Gaps = 6/108 (5%) Query: 251 LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFI 310 LN + + + + E K+ +I I A A++R+ P+ I Sbjct: 346 LNNRLFQLSEESKRIAKHEIEIQKKFVLGAACIILFFIG---APLGAIIRKGGMGLPLVI 402 Query: 311 SLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--FCISSIFLLMIKK 356 + ++ F + + K + L ++ I + +L+ + Sbjct: 403 A-TLFFLTYHFINIFAEKSAVEGAFPTWLGAWMGTLIIFPLGILLTYR 449 >gi|226355960|ref|YP_002785700.1| permease YjgP/YjgQ [Deinococcus deserti VCD115] gi|226317950|gb|ACO45946.1| putative permease YjgP/YjgQ; putative membrane protein [Deinococcus deserti VCD115] Length = 381 Score = 81.2 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 50/387 (12%), Positives = 108/387 (27%), Gaps = 38/387 (9%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+ + L L + ++ L ++ + Y +P Sbjct: 1 MTRLTRYVTAELIPPLLAGTLLFTAVLSFGYFFISSQWLA--GVPLGLVSRWIAYQVPDT 58 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V P + T M+ EL+ + + G + +PV +A L++ Sbjct: 59 LVKVFPMAIVLMTVVAFGRMSTERELVAVQSGGIGLGRVARPVALVAGLVTALALWLSLW 118 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I PK + L A S L S + L+G+ + Sbjct: 119 IAPKANVETRGLYWDALTGAGLSQLVGKTVDLGGGLTLALASYDSATRELRGVRVEKWNA 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKS----------PISKDISIMKFKSYTLQT 230 + + + + L+ +V+ P + ++ + + Sbjct: 179 DAPRRATLIFADKGTFENNQLALSGYQVYTVDYEAASELNRVPENDPLAFREAVQNVFPS 238 Query: 231 ESANSSTIVLKANDQNLS--------------------FLLNPNPNNPNYRPELLETYRS 270 T D LS L+ P + + R Sbjct: 239 VVIPEKTTDTLKVDTGLSRKQTLAQYADAIGADSEGWPELITALTA-PGVKASERQAARV 297 Query: 271 EFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIE 330 +++L ++ L ++ A + + I+L I+ + F + Sbjct: 298 NLNRKLALPFANLVLALSALPFALRFGRT----LGVSLGIALLIAVAYYLLFFVGLTVAS 353 Query: 331 QNPYYI-PILYLFLFCISSIFLLMIKK 356 P ++L + L M+++ Sbjct: 354 AMPAVPEVGVWLANIVFAVAGLWMLRR 380 >gi|317051998|ref|YP_004113114.1| permease YjgP/YjgQ family protein [Desulfurispirillum indicum S5] gi|316947082|gb|ADU66558.1| permease YjgP/YjgQ family protein [Desulfurispirillum indicum S5] Length = 342 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 48/353 (13%), Positives = 126/353 (35%), Gaps = 19/353 (5%) Query: 5 ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 + Y+LR F + + I +++ + SL L +++ +P+ + Sbjct: 6 QRYLLRECFFYFFAALASLSLIMASNSLIRMGSSTLEKGISLMSLAQLTLLSLPSTAFIT 65 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P + + +++NR+ E++I+ + G S ++K +LF + +++ + ++ P Sbjct: 66 IPVSALIAAMALSSALNRSNEMVILYSAGISPFGIMKVILFASTVITGIAIANSFVLAPL 125 Query: 125 CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTH 184 I+ + A +++ + +F +L D L D Q Sbjct: 126 ASKQIQHVYADMAENVSYRVILPGVFNKLGDTTLFYY-------HLGREGFHDVMVAQGD 178 Query: 185 KIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAND 244 + A+SGS+ ++++L + S +F + + E+A S Sbjct: 179 LVLSARSGSLVQGDESMVLLL-RDGTIVDARQGQSFTRFAVHEIPLETAVDSLR------ 231 Query: 245 QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKK 304 L + R E HKR + ++FG++ + + + Sbjct: 232 -----LSYSMMSVEQLRQLKGSKAILEIHKRYALSVSTLLFGVLGFMLGARGGRSGKGAS 286 Query: 305 IHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + + + + + + P + + + ++F+ ++ Sbjct: 287 VLTSLMVVLAFYLIRAIGVHSMDAGLIAPQQVEWIGPGVMAAVTVFVYFRFRR 339 >gi|167626384|ref|YP_001676884.1| hypothetical protein Fphi_0162 [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167596385|gb|ABZ86383.1| conserved membrane protein of unknown function [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 360 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 53/358 (14%), Positives = 121/358 (33%), Gaps = 12/358 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 E Y + I +F LFI+ I +++ S ++ ++K IP + Sbjct: 2 ILEKYYNKDIVNTFTSITLFIISIVSANLLIRLFQQAYSQGLGIDSIIKFVILTIPGNVS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + N E+ + G + + ++K + L+I F++ I Sbjct: 62 LVAPIAIFLAIVICFGKYFANNEMFVTLAGGVTWMQIVKNTMKPVYALTIITFLTVMYIN 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + T A S + ++ + D I I + N + + ++ Sbjct: 122 PLSKQTQDIYQASLTAKALLSSITDDKIIKTTDGKVIYIKSKSGNTLKDVFLYMATDNSD 181 Query: 183 THKIYYAQSGSIDLDRQAII--LNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 +K+ A + +D+ A +D ++ K P + + + K+ + Sbjct: 182 EYKVVTAPVAEVIIDKGAAYVDFHDAHIYTKEPKTYEHTYDTAKNAIYTIFDTSDRDYNH 241 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 D+ L + R EF R+ + ++ S++A L Sbjct: 242 DKVDR----LYMHTLIENFTDKDDGTVSRGEFFGRINNSISVIVA---SLLALALCRLRP 294 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMIKK 356 ++ K + S+ + V+ + ++ + + +L + I+K Sbjct: 295 RQNKYAKLLPSVVV-LAVYLCSNMFVNTLMTGGKLPVWIGLWLPHIFFIIYAIRTIRK 351 >gi|238750167|ref|ZP_04611670.1| Inner membrane protein yjgP [Yersinia rohdei ATCC 43380] gi|238711711|gb|EEQ03926.1| Inner membrane protein yjgP [Yersinia rohdei ATCC 43380] Length = 364 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 55/361 (15%), Positives = 125/361 (34%), Gaps = 19/361 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFSQKLVRILGAAVDGEIPTNLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G + +LI L LA+ S ++ + Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGMGKKSLIIAALILAVATSALAAVNTIWLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+ + + L F +D +F+ R Sbjct: 122 PWSSKHQDEVLNDARANPSLAALAGGQFKSSNDGSSALFIGNVSGKEFNRVFLAQLRPNG 181 Query: 183 T--HKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + + +D I F Y Sbjct: 182 NQRPSVIVADSGHMTERPDGSQVVTLNKGTRYEGTALLRDFRITDFVDYQAIIGHKEVQQ 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 A N+ L N + R+EFH RLT + VI L+ Sbjct: 242 NNTVAEQMNMKQLWRSNEPDA----------RAEFHWRLTLIVSVVIMALL---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ ++ + ++ + F S + + P+++++ + L +I Sbjct: 289 INPRQGRVLSMLPAMLLYLIFFLLQSSLRSNA-SSGKLDPLVWMWTVNGVYLALAVILNL 347 Query: 358 Y 358 + Sbjct: 348 W 348 >gi|297565136|ref|YP_003684108.1| permease YjgP/YjgQ family protein [Meiothermus silvanus DSM 9946] gi|296849585|gb|ADH62600.1| permease YjgP/YjgQ family protein [Meiothermus silvanus DSM 9946] Length = 346 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 46/361 (12%), Positives = 112/361 (31%), Gaps = 19/361 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+ R +G + L IV + + + + ++ + + +P Sbjct: 1 MSPLDRYLWREVGAAVLGGLAVIVLAFIGGYLYEVLAPLLQRGADPWVVAQYLAFRVPDA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P VL+ M +EL G S + ++ P+L LA +L I + Sbjct: 61 LVRGLPIAMLFALLLVLSRMGEESELKAFLAGGISPLRVLFPLLLLAAVLFISGVLIGES 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I PK + + L +A + L F + + + + I Sbjct: 121 IAPKATQSGQSLLRQAVFQKPRALLAPGSTFTDAYGRILYVGQADEGGIGGVRVITAEE- 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 S + ++L G S+ ++ +F+ T+ + Sbjct: 180 -------ILLSERAHFEGGQLVLEGGSRVTY-AGSRPRTVARFERGTVPLVEL-AQDAPG 230 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + L+ L + + ++++ + V A + Sbjct: 231 GLSALTLAELHSRIRQY-RQSGLPYHAELTAYYRKWAEPAAAFA----FTVFAVGLSFFL 285 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF----LFCISSIFLLMIKK 356 + + + + ++ + + + P+L + L+ ++ LL + + Sbjct: 286 LGGSRNLGMVGVVVLTFFYYATWSVGRIMGEAGALPPLLAAWGPGTLYAVAGAVLLGVGR 345 Query: 357 K 357 + Sbjct: 346 R 346 >gi|238761816|ref|ZP_04622790.1| Inner membrane protein yjgP [Yersinia kristensenii ATCC 33638] gi|238699930|gb|EEP92673.1| Inner membrane protein yjgP [Yersinia kristensenii ATCC 33638] Length = 364 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 53/361 (14%), Positives = 125/361 (34%), Gaps = 19/361 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFSQKLVRILGAAVDGEIPTNLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G + +LI L LA++ S ++ + Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGMGKKSLIMAALILALITSALASVNTIWLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+ + + L F D +F+ R Sbjct: 122 PWSSKHQDEVLNDARANPSLAALAGGQFKSSTDGNSALFIGNVTGKEFNRVFLAQLRPNG 181 Query: 183 T--HKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q +ILN G + + + +D I F Y Sbjct: 182 NQRPSVVVADSGHMIERPDGSQVVILNKGTRYEGTALLRDFRITDFVDYQAIIGHQEVQQ 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 A + L + N + R+EFH RLT + +I L+ Sbjct: 242 NNNVAEQMTMKQLWDSNKPDA----------RAEFHWRLTLIVSVIIMALL---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ ++ + ++ + F S + P+++++ + + +I Sbjct: 289 VNPRQGRVLSMLPAMLLYLIFFLLQSSLRSNA-SGGKLDPLIWMWAVNGVYLAVAVILNL 347 Query: 358 Y 358 + Sbjct: 348 W 348 >gi|328675790|gb|AEB28465.1| Permease YjgP/YjgQ family protein [Francisella cf. novicida 3523] Length = 360 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 54/358 (15%), Positives = 119/358 (33%), Gaps = 12/358 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 E Y + I +F LFI+ I +++ S ++ + K IP + Sbjct: 2 ILEKYYNKDIVNTFTSITLFIISIVSANLLIRLFQEAYSQGLGIDSIAKFVILTIPENVS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + N E+ + G + + ++K L + L+I I+ + Sbjct: 62 LVAPIAIFLAIIICFGKYFANNEMFVTLAGGITWMQIVKNTLKPVVALTIITLITVMYLN 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + T+ A S + + + D I IS + N ++ Sbjct: 122 PLSKQTLDIYRASLSAKALLSSITDKKIIKAPDGKIIYISNKSGNTLSDVFLYQNTPQDG 181 Query: 183 THKIYYAQSGSIDLDRQAII--LNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 +K+ A + I D+ A D ++ K+ + + S K + Sbjct: 182 EYKVMTAPTAKIVSDKTAAYIDFMDVNIYTKNSQNSEYSHDNAKKAIYTIFDNSDRDYNH 241 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 D+ L + +++EF R+ + ++ S++A L Sbjct: 242 DRVDR----LYMHTLIENFNDKDNGTAFKAEFFGRINNAISVIVS---SLLALALCRLRP 294 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMIKK 356 ++ K + S+ + ++ + I+ + + +L + I+K Sbjct: 295 RQNKYAKLLPSVVV-LAIYLCTNMFINTLMTTGSMPVWIGFWLPHIFFIIFAVRTIRK 351 >gi|331007486|ref|ZP_08330657.1| putative permease [gamma proteobacterium IMCC1989] gi|330418710|gb|EGG93205.1| putative permease [gamma proteobacterium IMCC1989] Length = 362 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 46/364 (12%), Positives = 107/364 (29%), Gaps = 9/364 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ YI R S L+ L I + + +++ + ++ + L IP+ Sbjct: 1 MRLLNAYIFRTTVVSILVVLLVITALDILAKLIDELGNLT-PAYTFAEALIYVVLAIPSS 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 PF + L S+ +EL+++ G S + L VL + + + Sbjct: 60 FYQYMPFAGLVGGLVGLGSLASTSELVVMRAAGVSLLRLTWAVLKPVLWFIAAMLVFAEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + + + + L++ + N L G+ D Sbjct: 120 VIPVSDQYAESRRSALLQGGNTALSAKGGVWNREGTLFMHFNSVQANGKLLGVTRYQYDD 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKS-------YTLQTESA 233 Q + ++ N E S + + + Sbjct: 180 KQRLTLASFAETALYTADGWREENVVETRFLDAQSSSDKEALITTATYPSRPWQTELSPN 239 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + +V ++ ++ L + + Y + ++ Q L + L++I Sbjct: 240 LLTILVQDTDNLAITKLYD-YAQYLEKQNLDNGKYLLAYWGKVLQPLVIISLVLVAISFI 298 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + + I F + + +L LFC L+ Sbjct: 299 FGPLREVTMGYRIFTGVVVGIVFQLTQKLLGPASLLYGISPLFAVLLPILFCFGVGLFLL 358 Query: 354 IKKK 357 + + Sbjct: 359 ARTR 362 >gi|319408319|emb|CBI81972.1| conserved membrane hypothetical protein [Bartonella schoenbuchensis R1] Length = 363 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 45/355 (12%), Positives = 110/355 (30%), Gaps = 13/355 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + Y ++ L I +A +I + ++S + L IS +P ++ Sbjct: 5 TLGRYFFVRYIKTTCYFVLSIFILALLIDFTENSGRLASLPHYTAKGALLISALRVPFIM 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF +L S+N+ EL++ + G S + P A L +F + N + Sbjct: 65 QQLFPFIALFSAMTMLISLNKKFELVVARSIGVSAWQFLIPACLGAFLFGLFSILFINPL 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-----LYIKISKYNPNNTLQGIFIV 176 S +++ A+ + + + +N L I Sbjct: 125 AAWGSSQAEKMIAEWRSNNVQTSINKNRIPWLTQHTNLGTTTIGARSITQQGLSLIDATF 184 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + L A +L +G +++ + + + + K+ + + Sbjct: 185 VQYNDNATVKNWIHAKQATLTNDAWLLTNGTIYKTGYVPEKFTEFRIKT---NLKPEFLT 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L ++ + + V LI+ + Sbjct: 242 EYLADPATIPFYKLPRKISAARSF-GYSANKFDMYLQSLIALPALLVAMTLIAATVSL-- 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 R + I + F ++ S ++ Y P++ + + ++F Sbjct: 299 KFTRFGQSKALILGGVIAGFMLY-VISVLVQAFGNAGYIPPVIAAWTPVVIALFF 352 >gi|296283031|ref|ZP_06861029.1| permease [Citromicrobium bathyomarinum JL354] Length = 365 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 40/350 (11%), Positives = 107/350 (30%), Gaps = 6/350 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTV 60 ++ LY+ + + +V + ++ +L + + L + +P + Sbjct: 9 RTLTLYLAKMFSLRIFAVLVMLVLVLMMLDLLSNSGQILEVPGNTEADLWLYASLRVPML 68 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P+ + T L ++N+N+E++ + G S ++ P++ A+L++ F Sbjct: 69 IQRFLPYSVLLATIITLVTLNQNSEVIAMKAAGLSAHQVLAPLIVTALLVAGISFAFNER 128 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNP--NNTLQGIFIVDS 178 + + + + A AL + + D + Y+ Sbjct: 129 VVTRATAQLTAWEATEFGALPDKPKSKGSIYLEDGQNILTARSYSGGGPAPTLRDVTYYR 188 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 R + + + + + ++ + A Sbjct: 189 RSPTAEITQKVDAPMAVHGPDGWAMQN--PSVFTVGTASLAQPSQLTVAPGITPATIELQ 246 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + Q L + E + + +++ L V+ ++ VA A Sbjct: 247 EIDPTTQPFWQLGSSIEAY-RQAGRDTEELEANYWHKISGPLAAVLMPILGAVAGFGLAR 305 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 Q I ++L ++ V + + P ++ FL + Sbjct: 306 SGQLFMRALIGMALGFAYFVIDNAALAMGDFGGYPPFLAAWAPFLLFLMI 355 >gi|56708376|ref|YP_170272.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110670846|ref|YP_667403.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis FSC198] gi|134302361|ref|YP_001122330.1| YjgP/YjgQ permease [Francisella tularensis subsp. tularensis WY96-3418] gi|224457506|ref|ZP_03665979.1| YjgP/YjgQ permease [Francisella tularensis subsp. tularensis MA00-2987] gi|254370999|ref|ZP_04987002.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis FSC033] gi|254875199|ref|ZP_05247909.1| permease yjgP/yjgQ family protein [Francisella tularensis subsp. tularensis MA00-2987] gi|56604868|emb|CAG45952.1| Permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110321179|emb|CAL09335.1| Permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis FSC198] gi|134050138|gb|ABO47209.1| putative permease YjgP/YjgQ family [Francisella tularensis subsp. tularensis WY96-3418] gi|151569240|gb|EDN34894.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis FSC033] gi|254841198|gb|EET19634.1| permease yjgP/yjgQ family protein [Francisella tularensis subsp. tularensis MA00-2987] gi|282159995|gb|ADA79386.1| putative permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis NE061598] Length = 360 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 52/356 (14%), Positives = 112/356 (31%), Gaps = 8/356 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 E Y + I +F LFI+ I +++ S ++ ++K IP + Sbjct: 2 ILEKYYNKDIVNTFTSITLFIISIVSANLLIRLFQEAYSQGLGIDSIVKFVILTIPENVS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + N E+ + G + + ++K L + L+I I+ + Sbjct: 62 LVAPIAIFLAIVICFGKYFANNEMFVTIAGGITWMQIVKNTLKPVVALTIITLITVMYLN 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + T+ A S + + + D I I + N ++ Sbjct: 122 PLSKQTLDIYRASLSAKALLSSITDQKIIKAPDGKIIYIGNKSGNTLSDVFLYQNTPQDG 181 Query: 183 THKIYYAQSGSIDLDRQAII--LNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 +K+ A + I D+ A + ++ K+ + + S K + Sbjct: 182 EYKVMTAPTAKIVSDKTAAYIDFMNVNIYTKNSQNSEYSYDNAKKAIYTIFDNSDRDYNH 241 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 D+ L Y++EF R+ + ++ + A R R Sbjct: 242 DRVDR----LYMHTLIENFNDKNNGTAYKAEFLGRINNAISVIVSS--LLALALCRLRPR 295 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 Q K + + ++ + + +L + + I+K Sbjct: 296 QNKYAKLLPSVVVLAIYLCTNMFINTLMANSSVPVWIGFWLPHIFFTIFAVRTIRK 351 >gi|88802489|ref|ZP_01118016.1| hypothetical protein PI23P_07865 [Polaribacter irgensii 23-P] gi|88781347|gb|EAR12525.1| hypothetical protein PI23P_07865 [Polaribacter irgensii 23-P] Length = 351 Score = 80.8 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 48/351 (13%), Positives = 107/351 (30%), Gaps = 6/351 (1%) Query: 13 GRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLK-ISGYLIPTVLPMVTPFCFA 70 +FL + L ++ IA I + ++I+ ++ +L I P Sbjct: 1 MVTFLFTLLILIPIAIAIDVSEKIDNFLEHPNLGISEVLNDYYINFIIYYSNTFMPLALF 60 Query: 71 METTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK---CRS 127 + + ++ NTE++ I N S + P A L+++ + + PK R Sbjct: 61 IAVILFTSKLSSNTEIIAITNAKVSFTRFLYPYFIGASLVTLLSLAMNHYVVPKSSKIRK 120 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF-IVDSRDTQTHKI 186 ++ + N +L D YI I +N N + F + Sbjct: 121 GFEKKYINSSKQSNALKYVSNFSLQLTDSTYIFIRSFNTANNMGYDFNSETYDGIKLISK 180 Query: 187 YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 + + + L I + + A + Sbjct: 181 LSSDNIMYNPKDSTFTLTGWRKRLIYEKRDRIFSGNKLDTVFNFSTKDLVYKSAFAQEMP 240 Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 LL + + L Y EF+KR + + I +I++ + ++ + Sbjct: 241 SGELLKYINISKKRGVKNLNAYLVEFYKRTSLPIASYILTIIAVGLSFRKKRGGTGVNLA 300 Query: 307 PIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + + + + +F + +I+L + +K Sbjct: 301 IGVGIMFLYVFFMKVGEVLGSVAGVDSLAYVWIPNIIFGVVAIYLYLNGRK 351 >gi|261342656|ref|ZP_05970514.1| inner membrane protein YjgP [Enterobacter cancerogenus ATCC 35316] gi|288315304|gb|EFC54242.1| inner membrane protein YjgP [Enterobacter cancerogenus ATCC 35316] Length = 366 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 56/371 (15%), Positives = 130/371 (35%), Gaps = 23/371 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVKILGAAVDGEIPTNLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ I ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMVLALFTGIIAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + D + + N +F+ R Sbjct: 122 PASSRHQDEVLAEAKANPGLAALAQGQFQQASDGNSVLFIESVDGNRFNDVFLAQLRPKG 181 Query: 183 T--HKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F++Y + Sbjct: 182 NARPSVVVADSGQLSQRKDGSQVVTLNKGTRFEGTAMLRDFRITDFQNYQAIVGHQTVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 N+ L+ + + R+E H R+T + L+ + + Sbjct: 242 DPTDTEQMNMRTLIATD----------SDRARAELHWRITLVFTVFMMALMVVPLSVVNP 291 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY--LFLFCISSIFLL--- 352 + + P + + F + K + +P + L+L + L Sbjct: 292 RQGRVLSMLPAMLLYLVFFLLQTSIKSNGGKGKIDPAIWTWVVNGLYLLLAVGLNLWDTV 351 Query: 353 ---MIKKKYTK 360 I+ ++T+ Sbjct: 352 PVRRIRARFTR 362 >gi|145219916|ref|YP_001130625.1| permease YjgP/YjgQ family protein [Prosthecochloris vibrioformis DSM 265] gi|145206080|gb|ABP37123.1| permease YjgP/YjgQ family protein [Chlorobium phaeovibrioides DSM 265] Length = 441 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 46/264 (17%), Positives = 89/264 (33%), Gaps = 13/264 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL+ F + L I+F+ + + L+++ + Sbjct: 1 MKLIDRYILKAHVGPFFFAFLTIIFVLILQFFASFADRFIGRGIGFGALVELIALQSAWM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + ++ +E+ + +G S L+ P+L ++LS F+ N+ Sbjct: 61 VGLAAPMAVLIAVVMAFGALTTTSEMTVFRASGVSLYRLMIPILLAGLVLSFFVERFNNV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 ++P + L A + EN F L D I + K + + I I DS Sbjct: 121 VQPLANYQARSLMDDIVKAKPNFGITENAFSPLVDGYSILVRKSDERTGGIGDIIIYDST 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAII----LNDGEVHRKSPISKDI--------SIMKFKSYT 227 + A+ G I L +GE+H + F+S Sbjct: 181 RPDFRSVITAEEGRISFSDDGGYLLLTLRNGEIHEVQQPDYRLYRKMSFQQHRYVFESTG 240 Query: 228 LQTESANSSTIVLKANDQNLSFLL 251 ++ + + LL Sbjct: 241 FGFSRSDDRRNRAGGKELSAKELL 264 Score = 49.2 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 13/101 (12%), Positives = 29/101 (28%), Gaps = 4/101 (3%) Query: 251 LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFI 310 L N + ++ + +E+HK+ F L+ +R I Sbjct: 328 LQSELTNRDVNQGMVNRFMAEYHKKYALAFACFFFVLVGAPLGILA----RRGGFGIGAI 383 Query: 311 SLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 F ++W K+ P +++ + Sbjct: 384 LSLFFFVLYWILMIAGEKMAVRGVLEPWAAIWMADAVMAAI 424 >gi|291514071|emb|CBK63281.1| Predicted permeases [Alistipes shahii WAL 8301] Length = 500 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 43/239 (17%), Positives = 96/239 (40%), Gaps = 6/239 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ +L+ +++ ++F+ + + + I+ + S I++++ Y + + Sbjct: 1 MKTIHRLVLKSYLGPMVLTFFIVMFVLMMNIVWRYIDELVGKGLSAGIIIELMTYFMANM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +PM P + + ++ N ELL + + G S + + KP++ L L+S+ F N Sbjct: 61 IPMGLPLSMLLAAIMTMGNLGENYELLAMKSAGMSLVQITKPLIILVSLVSVGSFFIGNN 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + ++ LFF D++ I++S P+ L ++ Sbjct: 121 LVPNANKKLFSTLYDIRQQKQALEFQDGLFFNGIDNMSIRVSHQEPDTHLLHDVLIYDNR 180 Query: 181 --TQTHKIYYAQSGSIDLDRQAII----LNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 A SG I L L GE + ++ S+ + + +T + Sbjct: 181 AANGNMNTIVADSGYIRLSDDKKYLLVTLFHGETYEQTRNSQWFTKSALRHHTFDLQKQ 239 Score = 42.3 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 20/150 (13%), Positives = 53/150 (35%), Gaps = 6/150 (4%) Query: 210 RKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQ--NLSFLLNPNPNNPNYRPELLET 267 +D + + + + +A N + + + L Sbjct: 307 SLQVDKRDFRDLLATDSVIMLPTRERERVWNQARTLAKNSRNMFAFDESTAKEALNQLYR 366 Query: 268 YRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH 327 + E+HK+++ + +IF LI A A++R+ P+ +S+ + Sbjct: 367 SKVEWHKKMSLPVSILIFFLIG---APLGAIIRKGGLGLPVVVSVIFFVIYYMISLSGEK 423 Query: 328 KIEQNPY-YIPILYLFLFCISSIFLLMIKK 356 ++ + + ++L F ++ I + + K Sbjct: 424 LAKEGNWEAVYGMWLSTFILTPIAIYLTYK 453 >gi|91214820|ref|ZP_01251793.1| putative permease [Psychroflexus torquis ATCC 700755] gi|91187247|gb|EAS73617.1| putative permease [Psychroflexus torquis ATCC 700755] Length = 516 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 32/192 (16%), Positives = 65/192 (33%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL ++FL ++ I + + + I + L I+ + +L+P + Sbjct: 1 MKILDRYILVSFVKTFLSVFTILMLIFILQSVWRFIEEFAGKDIDLEIISRFLLFLLPNL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +PMV P + + S E + + G S ++ ++ +LL F N Sbjct: 61 IPMVLPLTILLTSIMTFGSFAEQYEFAAMKSAGISLQRAMRSLIVFILLLGAVTFYFANT 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + E F + + K P+ I+ + Sbjct: 121 VIPYAEGKVLNMRKNIAQVKPSLAIIEGAFNDMGNINIKVNKKSGPDGRNLDDVIIHKKS 180 Query: 181 TQTHKIYYAQSG 192 Y Sbjct: 181 ENRVGNYTVIKA 192 Score = 46.9 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 13/113 (11%), Positives = 38/113 (33%), Gaps = 6/113 (5%) Query: 246 NLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKI 305 +++ + N + LL H + +I + A A++R+ Sbjct: 374 SITPQIISKKNQFKRKEILLNKIEMAMHSKYALPFACIILFFVG---APLGAIIRKGGLG 430 Query: 306 HPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMIKK 356 P+ I++ + + + + + P L +L + + + + + Sbjct: 431 LPMVIAVIVFLTYHFIGLFAGNSA-EGGSLSPFLGSWLSTIILFPLSIYLTYR 482 >gi|332297891|ref|YP_004439813.1| permease YjgP/YjgQ family protein [Treponema brennaborense DSM 12168] gi|332180994|gb|AEE16682.1| permease YjgP/YjgQ family protein [Treponema brennaborense DSM 12168] Length = 366 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 44/360 (12%), Positives = 115/360 (31%), Gaps = 5/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+ R F+ + F + ++++L + S+ ++++ +P Sbjct: 11 MTLLS-YLYRRFMPVFIGALSFFSLVLILVELLMNLWQFISAQVPAADIVRVMLLYVPKT 69 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P ++ VL+ EL + +G S P+L +++LS F+F E+ Sbjct: 70 VSFALPLAILFASSYVLSDFYAKNELTAVFASGVSLFRFTLPLLVFSVVLSAFMFFFEDR 129 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + +L K + + + K Y+ + R+ Sbjct: 130 VVVPAYAQKTELQQKLLNQEKSKNNDRIVVIAERGAVVYKADFYDDQASRLFTLYAVVRN 189 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ S + + L+ + + + L TE + Sbjct: 190 GDKSLRAVLRADSAVWNGSSWTLSGAVQYTMRGDTLIAEDPDPEITALLTEPPETFRNNT 249 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + + + + S+++K+ + I ++ R Sbjct: 250 VSVETVTASEARSYITHLRRAGLPTAEALSQYYKKFSFPFVVFIVV---FLSVGLSGKTR 306 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + + + + + + F+ + + + Y P+ + I IFL + K+ + Sbjct: 307 KNVLLISLVLCIGAAVA-FYVTQMVTMLLAKFGYISPLAGAWFPVILFIFLSGVLLKFAR 365 >gi|283778149|ref|YP_003368904.1| permease [Pirellula staleyi DSM 6068] gi|283436602|gb|ADB15044.1| permease YjgP/YjgQ family protein [Pirellula staleyi DSM 6068] Length = 395 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 51/397 (12%), Positives = 119/397 (29%), Gaps = 47/397 (11%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M ++ I + F ++ + + ++ + Q+ L +L++ Y++P Sbjct: 1 MPVIVRQVVWDILQWFTIAIVSLTVFMMLVFVGQQARL---YGLGALAILRLIPYILPNA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P V M+ + E++ I + G S + ++ P L LA LLS+ ++ Sbjct: 58 LAFAVPGSILFTVCVVYGRMSSDNEVVAIKSMGISPMVVVWPSLALAFLLSLVAVWLNDV 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + ++++ ++ + + I + ++ I + Sbjct: 118 AFSWGVTGMRRVVLQSVEEIC-YGMLRTQRSYSGPTFQIIVKDVEGRKLIRPIMTFSENN 176 Query: 181 TQTHKIYYAQSGSIDLD-----------------------------RQAIILNDGEVHRK 211 A + + + I L D R Sbjct: 177 DMPAFTLRATEAELRSNLQRNTLVVVLTDCEIDFSNGARVSSPGIVEREIKLEDATHKRV 236 Query: 212 SPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLL------------NPNPNNPN 259 S ++ S ++ + + + + L+ P Sbjct: 237 GGDSPTNLPLRQISSEVELQEIEITKLEQSLAAETGMNLMTGNFFELSPDAWQPKKKKLE 296 Query: 260 YRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVF 319 L R+E +R + + F +I A F+ + I + F Sbjct: 297 TARTRLYRLRTEPWRRWSNGFACLAFVMIGTPLAITLRNSDWMSTFGRCFLPILIGYYPF 356 Query: 320 WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 F+ K P Y +++ +++ +IKK Sbjct: 357 LAFALEKAKSGDLPPYS--IWIANIACAAVGYWLIKK 391 >gi|262341091|ref|YP_003283946.1| putative YjgP/YjgQ family permease [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272428|gb|ACY40336.1| putative YjgP/YjgQ family permease [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 381 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 69/371 (18%), Positives = 147/371 (39%), Gaps = 19/371 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +LY++R F + I + + +I+ ++ ++ I++K Y +++ Sbjct: 5 KKLDLYMIRLFITPFFIIFSTIFAVFMIQFFWSQIDELTGKNINILIIIKFVFYFGISII 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P+VTP + + ++ N EL+ I ++G S ++KP+L + +LSI L+ ++ Sbjct: 65 PLVTPISLLLTSIITFGHLSENQELIAIKSSGISLFRVMKPILGITCILSIGLYFFSDLA 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 PK K+L K L+E +F L D +IKI + ++ Sbjct: 125 IPKAIKQAKKLGYKISSTHPSFKLKEGIFVNLLPDFFIKIDRKKNQQLHNIFIFFYDKNL 184 Query: 182 QTHKIYYAQSGSIDLDRQAII----LNDGEVHRKSPISKDISI--MKFKSYTLQTESANS 235 + I + I Q+ L +G ++ ++ + S ++F + + Sbjct: 185 LVNTILSQKGFFIPNKDQSEFIQFKLINGILYSENTNKEQSSYQIVQFDTLIQNFQIPFY 244 Query: 236 STIVLKANDQN---------LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFG 286 I + ++ ++ L + L + E K+ T + +I Sbjct: 245 EEIKNLDDYESYNTQNLIQKINLLKKEKSKHQKENIHKLAKLQLELQKKFTFPVTCIIMF 304 Query: 287 LISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFC 345 L A A++R+ +P I+L+I + + +K+E+ Y I ++ F Sbjct: 305 LTG---APLGAIIRKGGIGYPTMIALAIFIIYYTLLTITQNKVEKVEIYPWIGAWIPNFI 361 Query: 346 ISSIFLLMIKK 356 + + M K Sbjct: 362 FFPVSIWMTYK 372 >gi|42526553|ref|NP_971651.1| hypothetical protein TDE1043 [Treponema denticola ATCC 35405] gi|41816746|gb|AAS11532.1| membrane protein, putative [Treponema denticola ATCC 35405] gi|325473491|gb|EGC76686.1| membrane protein [Treponema denticola F0402] Length = 377 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 57/369 (15%), Positives = 125/369 (33%), Gaps = 10/369 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K+ +Y+ + + F++S LF FI +V QIL + S +L + Y +P ++ Sbjct: 9 KTIFVYVFKELLLYFIVSFLFFFFIFFVNQILLMAEEILSKKAPTKDVLLLLFYSLPFII 68 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P+ + T L + + E + ++ G S ++ PV L + +S+ FI+ +I+ Sbjct: 69 ATTAPYAALIGTLMCLGRFSADHEFISMNALGISTSFILIPVFALGVFVSVGSFITNDIL 128 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ ++ + LE R ++ + + + + I R Sbjct: 129 IPRGTIKFNEVLYNIASSTPALELESYSVKRNENSIVVSGLIKDNSIHDLLIIDSSQRGA 188 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRK------SPISKDISIMKFKSYTLQTESANS 235 + DR I+ + R + D+ + +Y + + Sbjct: 189 KRFLSSSQTDVKKSNDRSIIMQLEMLNPRLLNLDLNNRSKFDVVYGESITYNVLAKDVAP 248 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRP----ELLETYRSEFHKRLTQWLFPVIFGLISIV 291 I D+ S+ L + LL Y E H++ + F L++ Sbjct: 249 KFISSSGPDKMTSYDLIKDIKQKKEAGDTSPRLLNIYIMELHRKFSVPFGAFFFVLLAFA 308 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + Q + + G + + N +++ + Sbjct: 309 ISRAGKTYDQSTGFIVGLLISVAYWAFLIGGQMLCLESGLNINGALVMWFPNVLLVICTA 368 Query: 352 LMIKKKYTK 360 ++ K+ K Sbjct: 369 VIAIKRLLK 377 >gi|227821475|ref|YP_002825445.1| permease YjgP/YjgQ family protein [Sinorhizobium fredii NGR234] gi|227340474|gb|ACP24692.1| permease YjgP/YjgQ family protein [Sinorhizobium fredii NGR234] Length = 360 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 47/353 (13%), Positives = 117/353 (33%), Gaps = 8/353 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPT 59 + + Y + + + I + ++I + + +S+ +++ L ++ + IPT Sbjct: 3 LSTLGRYFFKRYIVTTFWFLVGIFALIFIIDFSELASRMSALPHYTVSGALLMTTFRIPT 62 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 +L PF L S+NR EL++ G S ++P + A L+ + ++ N Sbjct: 63 ILQQTVPFVALFSAMAALISLNRRYELVVTRAAGISVWQFLRPFVLGAFLVGVLAVVALN 122 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + + L A+ + + ++ D I + N + V Sbjct: 123 PLAAWGTKRAEALEAEWGSSRSAQSSSIPWLRQIYDGTDTIIGARSVQNGGTELINVTVI 182 Query: 180 DTQTHKIYYAQS-GSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + L +G + + ++ ++ Sbjct: 183 HFDPQGTITLRQDAKSAKLEDGYWLLNGVTESGN--GRLPRRLETVQLRTNLKADFVQER 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + KA+ L + + ++ H L+ L V LI+ + K + Sbjct: 241 LAKADSIQFFDLPHK-IEVARSFGFSTDAMETQLHSLLSLPLLLVAMTLIAACVSLKFSR 299 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 Q + + + +S V + + ++ + P + +L + ++ L Sbjct: 300 FNQSR---SVILGGILSGFVLYVVTVLVKAFGSSGIVPPFVAAWLPVVVAMAL 349 >gi|328948913|ref|YP_004366250.1| permease YjgP/YjgQ family protein [Treponema succinifaciens DSM 2489] gi|328449237|gb|AEB14953.1| permease YjgP/YjgQ family protein [Treponema succinifaciens DSM 2489] Length = 356 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 52/356 (14%), Positives = 109/356 (30%), Gaps = 1/356 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+L+ F+ + +F V + + + + S S + I Y IP Sbjct: 1 MKLVF-YMLKRFFPVFIGAVMFFVLVLCLTDLFMNLWNYISKNVSSRDVALILIYYIPKA 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P T +L+ ELL + +G S P+L +A+ +S LFI E+ Sbjct: 60 VWYAVPIAMLFATAYMLSDFYARNELLAVFASGISLFKFSVPLLTVAVAMSFALFIFEDN 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I S QL + + ++ K +N V R Sbjct: 120 IVVPSFSKKTQLQESVLSKEKSLNNSKIVIMAEGGNVIYKADFFNNKAESLSKLYVLFRT 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + L + ++ + +++ + E + Sbjct: 180 EDKKPDAVVYAQKAFWKNNSWKLENAVEYKFQDENFLACVLEKRLEERLLEPPETFRNNT 239 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + ++ + + +S ++K+ + I ++I + K Sbjct: 240 ISVERVNTKEAREYIEHLEKAGLPSAEEKSVYYKKYSFPFVVFIVVFLAIGLSGKTRKNV 299 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + ++ + + + P + + LF I S LL K Sbjct: 300 LLVSLAMSITAVVLFYVFQMVTMLMAKFQAIPPLFGAWSPVVLFIIISCVLLKYAK 355 >gi|218672883|ref|ZP_03522552.1| putative permease protein [Rhizobium etli GR56] Length = 340 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 43/342 (12%), Positives = 110/342 (32%), Gaps = 10/342 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + Y R + + + I++++ + +S ++ + ++ +P +L Sbjct: 5 TLSRYFFRRYLATTGWFLIGVSAISFLLDFSETAGRMSGLPGYTIGGGIVMTAVRLPLIL 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PF VL +NR EL++ G S + P + ++ L + + N + Sbjct: 65 QQTIPFIALFVGMTVLIGLNRKYELVVTRAAGISVWQFMFPFIAGSLALGLLTMTALNPL 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 + + + + + + + G +VD+ Sbjct: 125 AAWGQRQALLVESDWRGENAVLRKAPQIPWLRQISGRDDVIIGAQTVQENGTKLVDAVLI 184 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + + D L DG + + + + ++Q + V + Sbjct: 185 HFDS---SGRVILRQDAATAKLEDGYWQLNGVVERKPGEIPLRKASVQLRTNLKQDFVQE 241 Query: 242 ---ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 A + F L+ + ++F+ L+Q L V LI+ + K + Sbjct: 242 RLTAPETIGFFDLSNRIAAAKSFGISTKALETQFNSLLSQPLLLVAMTLIAATVSLKFSR 301 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY 340 Q + P+ + +S + + + ++ + P + Sbjct: 302 FNQSR---PVILGGILSGFMLYVITVLVKAFGSSGVVPPFVA 340 >gi|123440874|ref|YP_001004865.1| hypothetical protein YE0501 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|332160137|ref|YP_004296714.1| hypothetical protein YE105_C0513 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|122087835|emb|CAL10621.1| putative membrane protein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|318607297|emb|CBY28795.1| putative permease [Yersinia enterocolitica subsp. palearctica Y11] gi|325664367|gb|ADZ41011.1| hypothetical protein YE105_C0513 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330859699|emb|CBX70035.1| lipopolysaccharide export system permease protein lptF [Yersinia enterocolitica W22703] Length = 364 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 52/361 (14%), Positives = 126/361 (34%), Gaps = 19/361 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFSQKLVRILGAAVDGEIPTNLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G + +LI L LA++ S ++ + Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGMGKKSLIMAALILALVTSALAAVNTIWLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+ + + L F D +F+ R Sbjct: 122 PWSSKHQDEVLNDARANPSLAALAGGQFKSSTDGNSALFIGNVTGKEFNRVFLAQLRPNG 181 Query: 183 T--HKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q +ILN G + + + +D I F Y Sbjct: 182 NQRPSVVVADSGYMTERPDGSQVVILNKGTRYEGTALLRDFRITDFVDYQAIIGHQEVQQ 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 A+ + L + + R+EFH RLT + ++ L+ Sbjct: 242 NNNAADQMTMKQLWRSHQPDA----------RAEFHWRLTLIVSVIVMALL---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ ++ + ++ + F S + + P ++++ + + L +I Sbjct: 289 VNPRQGRVLSMLPAMLLYLIFFLLQSSLRSNA-SSGKLDPSIWMWAVNGAYLALAVILNL 347 Query: 358 Y 358 + Sbjct: 348 W 348 >gi|325267812|ref|ZP_08134462.1| YjgP/YjgQ family permease [Kingella denitrificans ATCC 33394] gi|324980693|gb|EGC16355.1| YjgP/YjgQ family permease [Kingella denitrificans ATCC 33394] Length = 353 Score = 80.4 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 41/360 (11%), Positives = 115/360 (31%), Gaps = 7/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y++ + + L ++ + I +L + ++ + P Sbjct: 1 MKLLSRYLIIRLTVMSAYALLALLALYNFIDLLS--EKTGIGNYTFWHAVQFTLLQTPAR 58 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + L+ ++ N+EL ++ +G I ++ + + ++ + Sbjct: 59 AYLLMPLATLIGGLLALSQLSSNSELAVMKTSGWHISRFIGTIVQFSFIFAVITVLLGEW 118 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P+ S + + A+ S + D + I P+ TL I I Sbjct: 119 IAPQLSSYADNMKSTARSGQLSSTRN--GVWIKQPDSMVYIGSMLPDKTLLDISIWHYTP 176 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ D+ L + + + + + + + + T + +++ Sbjct: 177 QFRLTEAIHAEKAVMRDQTWQ-LQNVQSSKITEERVIVQKQPARDWHMNTTNQLMDVLLV 235 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K + S L + Y + +L + ++ L+++ Sbjct: 236 KPEQMSFSALTQ-YIGYLKKNNQQTLAYDVAWWNKLVYPVATMVMALVALAFTPVSGRNH 294 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 I L + F ++ P ++ + L + + + +I ++ + Sbjct: 295 NLGLKLFGGIGLGLLFFFTGRLFGFSAQLYGVPAFLSAV-LPTALFACLAVFLIYRQEKR 353 >gi|240850231|ref|YP_002971624.1| putative permease, YjgP/YjgQ family [Bartonella grahamii as4aup] gi|240267354|gb|ACS50942.1| putative permease, YjgP/YjgQ family [Bartonella grahamii as4aup] Length = 363 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 44/355 (12%), Positives = 103/355 (29%), Gaps = 13/355 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTVL 61 + Y + I +A +I + +SS + +S IP ++ Sbjct: 5 TLGRYFFIRYLKITCYFWGSIFVLALLIDFTENSGRLSSIPHHTAKDAFFLSVLRIPFIM 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF L S+N+ EL++ + G S + P A LL +F + N + Sbjct: 65 QQLIPFIALFSAMATLISLNKKLELVVTRSIGVSAWQFLMPACLGAFLLGLFSILLINPL 124 Query: 122 EPKCRSTIKQLSAKAQLAL-----TFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 S ++ + + + + I Sbjct: 125 AAWGFSQAEKKMTEWRNNNVLTPLHNTDIHWLTQRTNLGRTTIGAKFITDQGLSLLDATF 184 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + L + +L +G +++ + ++++ K+ + + Sbjct: 185 VQYNDNATVKNWINTPKATLTNGSWLLTNGTIYKIGHPPEKFTVLQIKT---NLKPEFLT 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + F + V LI+ + Sbjct: 242 ERLANPATIPFYQL-PKKIMIARSFGYSANNFDMYFQSLIALPALLVAMTLIAATVSL-- 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 R + I + F ++ S ++ Y PI+ + + ++FL Sbjct: 299 NFTRFGQSRTLILGGVIAGFMLY-VISVLVQAFGNAGYIPPIIAAWTPVVIALFL 352 >gi|156502931|ref|YP_001428996.1| putative permease, YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|156253534|gb|ABU62040.1| putative permease, YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica FTNF002-00] Length = 360 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 52/356 (14%), Positives = 112/356 (31%), Gaps = 8/356 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 E Y + I +F LFI+ I +++ S ++ ++K IP + Sbjct: 2 ILEKYYNKDIVNTFTSITLFIISIVSANLLIRLFQEAYSQGLGIDSIVKFVILTIPENVS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + N E+ + G + + ++K L + L+I I+ + Sbjct: 62 LVAPIAIFLAIIICFGKYFANNEMFVTIAGGITWMQIVKNTLKPVVALTIITLITVMYLN 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + T+ A S + + + D I I + N ++ Sbjct: 122 PLSKQTLDIYRASLSAKALLSSITDQKIIKAPDGKIIHIGNKSGNTLSDVFLYQNTPQDG 181 Query: 183 THKIYYAQSGSIDLDRQAII--LNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 +K+ A + I D+ A + ++ K+ + + S K + Sbjct: 182 EYKVMTAPTAKIVSDKTAAYIDFMNVNIYTKNSQNSEYSYDNAKKAIYTIFDNSDRDYNH 241 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 D+ L Y++EF R+ + ++ + A R R Sbjct: 242 NRVDR----LYMHTLIENFNDKNNGTAYKAEFLGRINNAISVIVSS--LLALALCRLRPR 295 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 Q K + + ++ + + +L + + I+K Sbjct: 296 QNKYAKLLPSVVVLAIYLCTNMFINTLMANSSVPVWIGFWLPHIFFTIFAVRTIRK 351 >gi|327398771|ref|YP_004339640.1| permease YjgP/YjgQ family protein [Hippea maritima DSM 10411] gi|327181400|gb|AEA33581.1| permease YjgP/YjgQ family protein [Hippea maritima DSM 10411] Length = 348 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 65/357 (18%), Positives = 128/357 (35%), Gaps = 13/357 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K + YIL+ + SF++S I + + +++ +L+ S +LLKI GY + + Sbjct: 2 LKKLDRYILKSLIVSFVISFFVIAVVMLIGDLVKLYDLLFGKGSSFIVLLKILGYTVVFL 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + V + ++ N+E+ I + G S + P ++ + +FLF S Sbjct: 62 LAFIVPMALTIAINYVYSDLSNNSEITAIRSCGISLFRVYFPAFLFSVAVFVFLFYSIAF 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + PK R + + AK ++ L+ N+F+ D + + L+ +F Sbjct: 122 VAPKARLSYRVEIAKTFRNKVYAALKPNMFYDKVDGVMWIKNLSPDKKHLKDVFFAQKG- 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 KI+ A+ G I+ V SP F Y L + Sbjct: 181 ----KIFLAKKGDFKDIPSGILAEFFNVKMYSPSKSGFEYGSFDRYELAFLTGRGYFKPN 236 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K N + +SF Y + +K ++ + LI+ + Sbjct: 237 KNNTRFMSF----GEVVNYYSKSKSKDALYRINKIVSMSMSVFALSLIAFSFGITFSRSG 292 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ F +F+ + + +YL + KK Sbjct: 293 KSAG----IVASLFLFFMFYIILMLSESLCDATGNPYFIYLPNVVAFVFGSYIFYKK 345 >gi|168704909|ref|ZP_02737186.1| hypothetical protein GobsU_35554 [Gemmata obscuriglobus UQM 2246] Length = 366 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 43/363 (11%), Positives = 102/363 (28%), Gaps = 13/363 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSST----ESLNILLKISGYL 56 M + + L RS+++ + +V + VI + ++ + S + G Sbjct: 1 MTAIDRMFLWTFFRSYIIVLISLVGLFIVIDLFTHLDAFVNKPGGFVASARHITYYYGNR 60 Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 +P + F + + M RN ELL + + G I+PV A + + Sbjct: 61 VPEYFDLFGNFVTLIAGAFTVAWMQRNNELLPLLSAGVPTRRAIRPVFLGAAVTLALGPL 120 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 ++ + P+ + A S + + Sbjct: 121 NQEFLIPEVADALTSQRDDPDQAKAQSLMGAYDS--SGIHFEGLAGFRKDKLVKKMCVTF 178 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQ------AIILNDGEVHRKSPISK-DISIMKFKSYTLQ 229 AQ + +L D + +++++ + ++ Sbjct: 179 PEHSRSGMVHLTAQEAVFRPKQGDDPLTGGWLLTDATPDTFTGEIPLNLTVLGTGRFFVK 238 Query: 230 TESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 + A+ + + + + P FH R+T+ L ++ + Sbjct: 239 VQDADYDAVCRGGAWYIYAATSDLQTMLVDPEPRRRGKLAVLFHTRVTRPLVGMVMVVFG 298 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 + I + +F Y+ + P L + LF ++ Sbjct: 299 LAVILGNPNRHVIISSGLCLIVSAATFLFVIACKYLGDQDVLPPPLAAWLPVILFGPPAL 358 Query: 350 FLL 352 Sbjct: 359 VAF 361 >gi|226357374|ref|YP_002787114.1| membrane protein; permease [Deinococcus deserti VCD115] gi|226319364|gb|ACO47360.1| putative membrane protein; putative permease [Deinococcus deserti VCD115] Length = 368 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 54/373 (14%), Positives = 134/373 (35%), Gaps = 22/373 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK FE Y+L I + + ++ + + + + I + + ++ ++ +P Sbjct: 1 MKRFERYVLAEILPLLVGALASVIVLFVLAALQEVIAPLLAKGARPLLVARVLALNVPEA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 P T L+ ++ ++EL +G L +PVL L + +++ F+ Sbjct: 61 AARALPIALMFATLLGLSRLSSDSELKAALASGIPARRLYRPVLLLGLGVTVLAFLIGEG 120 Query: 121 IEPKCRSTIKQLSAKAQLALT-------FSYLEENLFFRLDDDLYIKISKYNPNNTLQGI 173 + P+ + +++ + ++L R I + + L+ + Sbjct: 121 LLPRTKIEERKVKQEIVFDNPRVIGLGAQEPGGQSLVLRDALGRAISVGEVRAGGELRDL 180 Query: 174 FIVDSRDTQTHKI-YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE- 231 IV + + A+ G + + L G+ + ++I+ F+ TL + Sbjct: 181 RIVTMQGGSVPREVITAREGRLKSGSNVLELQGGQRVTYQ-DGRPVTILSFERGTLPVQD 239 Query: 232 ---SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 ++ LKAN L LL + + + + H++ + L + Sbjct: 240 VQADLDTGGKALKANYLPLRELLARTNSYRQQHIQAPAEFTA-LHQKFAEPLAALALAFF 298 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL----FLF 344 ++ A Q + + +L ++F + +S + +N +L + Sbjct: 299 AVSLAV---FTFQSGRDLGLVWALLLAFAYYATWSVF-RIMGENGAIPGVLAAYAPDLIA 354 Query: 345 CISSIFLLMIKKK 357 ++ LL + + Sbjct: 355 VVAGAVLLKLAGR 367 >gi|307129163|ref|YP_003881179.1| hypothetical protein Dda3937_01299 [Dickeya dadantii 3937] gi|306526692|gb|ADM96622.1| conserved inner membrane protein [Dickeya dadantii 3937] Length = 372 Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 50/354 (14%), Positives = 130/354 (36%), Gaps = 19/354 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETFKSQVAILFILLLIFFCQKLVRILGAAVDGDIPTNLVLSLLGLGVPAMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ G S+ L+K L L++L + F + + Sbjct: 62 LILPLSLFLGLLMTFGRLYAESEITVMHACGLSKGVLLKAALLLSLLTASFAAANVLWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV--DSRD 180 P ++ A+A+ + L E F + D + + + +F+ R+ Sbjct: 122 PWSSRHQDEVLAEARANPGMASLAEGQFQQTQDGNSVLFVGKANGSDFERVFLAQLHPRE 181 Query: 181 TQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A G++ Q + L+ G + + + +D I F Y + Sbjct: 182 NTRPSVVVADRGTVTARGDGSQVVTLSKGTRYEGTAMLRDFRITDFIDYQAIIGYQPVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L + R+EFH RLT L ++ ++ Sbjct: 242 DPNNVDQMDMQTLWRSSDIAA----------RAEFHWRLTLILSVLVMAIM---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + ++ ++ + ++ + F S + + P+++++L + L Sbjct: 289 VNPRQGRVLSMLPAMLLYLVFFLLQSSLRSNAGK-GKLDPLVWMWLTNLGYFAL 341 >gi|187931969|ref|YP_001891954.1| hypothetical protein FTM_1332 [Francisella tularensis subsp. mediasiatica FSC147] gi|187712878|gb|ACD31175.1| conserved hypothetical protein [Francisella tularensis subsp. mediasiatica FSC147] Length = 360 Score = 80.0 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 52/356 (14%), Positives = 113/356 (31%), Gaps = 8/356 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 E Y + I +F LFI+ I +++ S ++ ++K IP + Sbjct: 2 ILEKYYNKDIVNTFTSITLFIISIVSANLLIRLFQEAYSQGLGIDSIVKFVILTIPENVS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + N E+ + G + + ++K L + L+I I+ + Sbjct: 62 LVAPIAIFLAIVICFGKYFANNEMFVTIAGGITWMQIVKNTLKPVVALTIITLITVMYLN 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + T+ A S + + + D I I + N ++ Sbjct: 122 PLSKQTLDIYRASLSAKALLSSITDQKIIKAPDGKIIYIGNKSGNILSDVFLYQNTPQDG 181 Query: 183 THKIYYAQSGSIDLDRQAII--LNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 +K+ A + I D+ A + ++ K+ + + S K + Sbjct: 182 EYKVMTAPTAKIVSDKTAAYIDFMNVNIYTKNSQNSEYSYDNAKKAIYTIFDNSDRDYNH 241 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 D+ L Y++EF R+ + ++ + A R R Sbjct: 242 DRVDR----LYMHTLIENFNDKNNGTAYKAEFLGRINNAISVIVSS--LLALALCRLRPR 295 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 Q K + + ++ + ++ +L + + I+K Sbjct: 296 QNKYAKLLPSVVVLAIYLCTNMFINTLMANRSVPVWIGFWLPHIFFTIFAVRTIRK 351 >gi|312113657|ref|YP_004011253.1| permease YjgP/YjgQ family protein [Rhodomicrobium vannielii ATCC 17100] gi|311218786|gb|ADP70154.1| permease YjgP/YjgQ family protein [Rhodomicrobium vannielii ATCC 17100] Length = 363 Score = 80.0 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 49/354 (13%), Positives = 110/354 (31%), Gaps = 7/354 (1%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ + + L + + + + ++ + + S L I+ IP + Sbjct: 9 RYMAKRFAITILGVFFVTLLLIFFVDFVEVLRSGARKDVSAGTLALITLLRIPIFAELTL 68 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 PF + T S++R +EL I+ G S ++P L +AI +F N + Sbjct: 69 PFAILIGTIAAFLSLSRTSELTIMRAAGLSVWQFVQPALIVAIFFGVFAVTVYNPVASAM 128 Query: 126 RSTIKQLSAKA----QLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 ++ +++ A+ + T L D I +K + + L + + Sbjct: 129 KAKSEKIQAEIFQSEKSFATSRGTGSWLRQESVDGPTILHAKTSADRGLTLAGVTLLQFD 188 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 ++ Y + RQ +G + + S + F S A + Sbjct: 189 PANRFYEQIQANKAELRQGYWRLEGVIVQSSGDAVRRYDEYFVSTY--LGPAQIMNSLGS 246 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + L Y + L + + LI+ + K + Sbjct: 247 LETLSFWDL-PGFIAFAGKAGLPTRQYELQHQLFLARPILMAAMVLIAATCSLKAFRFGK 305 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + ++ F +F S + P + L + +++ Sbjct: 306 IQTMVLTGLTGGFGFFIFSELSRKVGASGLVPVTVAAWGPALVALLLSATVLLY 359 >gi|254514079|ref|ZP_05126140.1| permease YjgP/YjgQ family protein [gamma proteobacterium NOR5-3] gi|219676322|gb|EED32687.1| permease YjgP/YjgQ family protein [gamma proteobacterium NOR5-3] Length = 362 Score = 79.7 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 47/319 (14%), Positives = 100/319 (31%), Gaps = 23/319 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + L ++ I + ++ + +S + ILL + Y +P L Sbjct: 2 RLRSYLGSDVLGHTLAVSSVLLAIILTGRFVKYLAEAASGKLAAEILLPVMFYRLPGFLE 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E++I+ G L + L A L+ + + I Sbjct: 62 LLLPLGLFIGILMSYGRLYVESEMVILSACGVGPAKLARFTLAPAFLIMLIVAGLSLFIT 121 Query: 123 PK--CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ RS +A L D + L+ +F+ + Sbjct: 122 PQGAARSEALLNDPQALQGLQLLAAGRFQPRGDDGTVTYAADIDPEAGDLRQVFLYAPKS 181 Query: 181 TQTHKIY----YAQSGSIDLDR----QAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 + A+ GS+ +D + + L+ G +P D ++ F + Sbjct: 182 ADDERAVAGVTVARRGSVVVDEATGARYLELSHGYRFSGTPGRADYRVVSFGQFGQLLPE 241 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 S + + LL R+ H RL+ L I L+++ Sbjct: 242 EPSMARSEPVDAKPTRQLLE----------SRDPEDRAALHWRLSVALMVPIVALLALSL 291 Query: 293 ADKRALVRQRKKIHPIFIS 311 +R + + + Sbjct: 292 ---SKTNHRRGRYIKLAPA 307 >gi|165976525|ref|YP_001652118.1| permease [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|165876626|gb|ABY69674.1| predicted permease [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 334 Score = 79.7 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 44/325 (13%), Positives = 106/325 (32%), Gaps = 19/325 (5%) Query: 35 RINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGT 94 +N S +++L + G +P + + P + L +E+ ++ G Sbjct: 1 MLNSAVSGKVPTDLVLSLLGLGMPALAQFMLPLSLFVALLLTLGRFYAESEITVMRACGI 60 Query: 95 SRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLD 154 + L K FL+I + + + P + ++ A+A+ FS L F Sbjct: 61 GKSLLTKVAFFLSIFTTALAVYNVFWLTPWAINKQSEMLAEAKSNPRFSALSAGQFMTAG 120 Query: 155 DDLYIKISKYNPNNTLQGIFIVD--SRDTQTHKIYYAQSGSID---LDRQAIILNDGEVH 209 + + N N L I++ + + A+SG + Q + L + + Sbjct: 121 GYVLFIENINNEQNKLNDIYVFQPDQQKKNRPSVVVAESGQLQGLPNGDQILTLENSTRY 180 Query: 210 RKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYR 269 + D I F SY + + + + L+ + + Sbjct: 181 EGTANVADFRISHFDSYQAYLGYQDVDSNEKLVQRADFNKLM----------ADQSNEAK 230 Query: 270 SEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI 329 +E R L + L+++ ++ ++ + + ++ + F S + Sbjct: 231 AELQWRFALILAVPLMALLAV---PMSSVNPRQGRFAKVIPAVLLYLIYFLLQSSLKSSG 287 Query: 330 EQN-PYYIPILYLFLFCISSIFLLM 353 ++ L + ++M Sbjct: 288 ASGKLDATLLMPLVSIAFFILAMVM 312 >gi|331674536|ref|ZP_08375296.1| putative permease [Escherichia coli TA280] gi|331068630|gb|EGI40025.1| putative permease [Escherichia coli TA280] Length = 356 Score = 79.7 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 68/365 (18%), Positives = 143/365 (39%), Gaps = 18/365 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + I QL ++Q L L F D+ I + +N ++ + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 +I+ A+S + ++ ++L++G + +D + +++ L + S Sbjct: 181 ANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQSP 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 V + + P + +E R ++ L ++ ++A Sbjct: 241 NVKRKAKSVTELARSAFPAD-----------HAELQWRQSRGLTALLMA---LLAISLSR 286 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIKK 356 + ++ + + + +F+G + IP L+L + L+++ + Sbjct: 287 VKPRQGRFSTLLPLTLLFVAIFYGGDVCRTLVANGAIPLIPGLWLVPVLMLMGLLMLVAR 346 Query: 357 KYTKI 361 ++ + Sbjct: 347 DFSLL 351 >gi|171059277|ref|YP_001791626.1| permease YjgP/YjgQ family protein [Leptothrix cholodnii SP-6] gi|170776722|gb|ACB34861.1| permease YjgP/YjgQ family protein [Leptothrix cholodnii SP-6] Length = 364 Score = 79.7 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 52/362 (14%), Positives = 125/362 (34%), Gaps = 18/362 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ + + + RSF + + I+ I + +++ + + S ++ + GY LP Sbjct: 2 LFDSTLRKELSRSFGGTLIVILTIVLTMMLIRTLGQAALGRVSPQDVVLLLGYTSLGHLP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + + + LT M ++E+ I +G S ++PV+ + F+ + Sbjct: 62 TMLCLSLFVAVVSTLTRMYGDSEMTIWFASGVSLTRFVRPVVRFGTPIVFFVAALLLFVW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIKISKYNPNNTLQGIFIVDSRDT 181 P I +L + + S + F + I K +P+ + + Sbjct: 122 PWSNRNISELRGRYEQRSDLSRVAPGQFQTSSNGQRVFFIDKQSPDAGTGRNIFILDQRV 181 Query: 182 QTHKIYYAQSGSID-----LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + AQ+G ID + ++L++G + +I +F Y+++ + Sbjct: 182 DRESVTSAQTGRIDLPDADDTHRRLVLDNGARTDLDLKGETRTISRFDQYSIRISEKALT 241 Query: 237 TIVLKAN-DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 I ++ LL R+E R+ L + L+ + A Sbjct: 242 RIDEPPPKARSSFDLLL----------SSDPKVRAELAWRVGMVLGGINLMLLGLGLAQG 291 Query: 296 RALVRQRKKIHPIFISLSISF-GVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + +S + F + +++ + ++ +F + + L Sbjct: 292 GPRSGSGWTLLLALLSFVVYFNLISLSQAWVASARLSLGTALASVHGGVFVLCAALLWWR 351 Query: 355 KK 356 + Sbjct: 352 VR 353 >gi|328949932|ref|YP_004367267.1| permease YjgP/YjgQ family protein [Marinithermus hydrothermalis DSM 14884] gi|328450256|gb|AEB11157.1| permease YjgP/YjgQ family protein [Marinithermus hydrothermalis DSM 14884] Length = 335 Score = 79.7 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 46/353 (13%), Positives = 105/353 (29%), Gaps = 21/353 (5%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 Y+LR + +L+ L + + + + L +L+I Y +P L + Sbjct: 2 LGRYLLREVLPPYLLGTLLFIALITTDLLASLSGVFLRQGTPLVEVLQIVLYRMPFTLGI 61 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P L R++EL + +G S + L+ +L L+ +++ + + ++P Sbjct: 62 ALPLGLVFAILIGLARWVRDSELKAMYASGVSPLRLLPVLLGLSAVVAGGVLFNAAWLKP 121 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + +QL + S + N + + ++ P+ G + Sbjct: 122 EAHARYEQLLYRVYYGTVPSGVLSNQAYAPEGLGVYFAARIYPDGQGGGRLENVRVVEPS 181 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 ++ A G +L D +R +P ++ +S A Sbjct: 182 GALWSAARGVWQ--DARWVLEDA--YRINPDGT----VETRSRVPLPFPAQFVPPTTSYE 233 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 L L +P R +R + ++ V Sbjct: 234 ALPLGELRELARVDPEA--------RFPLQRRYADAFGVIALAWLAGVVGLGLREA---- 281 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + FG F ++ +L + ++ Sbjct: 282 -AWAFVAVVLLIFGYFVLWTLAAQLARFALVGAYGAWLPNAVYFLLAAWGTRR 333 >gi|89256769|ref|YP_514131.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica LVS] gi|115315160|ref|YP_763883.1| hypothetical protein FTH_1434 [Francisella tularensis subsp. holarctica OSU18] gi|167010910|ref|ZP_02275841.1| hypothetical protein Ftulh_09393 [Francisella tularensis subsp. holarctica FSC200] gi|254368060|ref|ZP_04984080.1| hypothetical protein FTHG_01381 [Francisella tularensis subsp. holarctica 257] gi|254369660|ref|ZP_04985670.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica FSC022] gi|89144600|emb|CAJ79919.1| Permease YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica LVS] gi|115130059|gb|ABI83246.1| conserved hypothetical protein [Francisella tularensis subsp. holarctica OSU18] gi|134253870|gb|EBA52964.1| hypothetical protein FTHG_01381 [Francisella tularensis subsp. holarctica 257] gi|157122619|gb|EDO66748.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica FSC022] Length = 360 Score = 79.7 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 52/356 (14%), Positives = 112/356 (31%), Gaps = 8/356 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 E Y + I +F LFI+ I +++ S ++ ++K IP + Sbjct: 2 ILEKYYNKDIVNTFTSITLFIISIVSANLLIRLFQEAYSQGLGIDSIVKFVILTIPENVS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + N E+ + G + + ++K L + L+I I+ + Sbjct: 62 LVAPIAIFLAIIICFGKYFANNEMFVTIAGGITWMQIVKNTLKPVVALTIITLITVMYLN 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + T+ A S + + + D I I + N ++ Sbjct: 122 PLSKQTLDIYRASLSAKALLSSITDQKIIKAPDGKIIYIGNKSGNTLSDVFLYQNTPQDG 181 Query: 183 THKIYYAQSGSIDLDRQAII--LNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 +K+ A + I D+ A + ++ K+ + + S K + Sbjct: 182 EYKVMTAPTAKIVSDKTAAYIDFMNVNIYTKNSQNSEYSYDNAKKAIYTIFDNSDRDYNH 241 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 D+ L Y++EF R+ + ++ + A R R Sbjct: 242 NRVDR----LYMHTLIENFNDKNNGTAYKAEFLGRINNAISVIVSS--LLALALCRLRPR 295 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 Q K + + ++ + + +L + + I+K Sbjct: 296 QNKYAKLLPSVVVLAIYLCTNMFINTLMANSSVPVWIGFWLPHIFFTIFAVRTIRK 351 >gi|226329629|ref|ZP_03805147.1| hypothetical protein PROPEN_03539 [Proteus penneri ATCC 35198] gi|225202815|gb|EEG85169.1| hypothetical protein PROPEN_03539 [Proteus penneri ATCC 35198] Length = 343 Score = 79.7 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 49/343 (14%), Positives = 125/343 (36%), Gaps = 19/343 (5%) Query: 24 VFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRN 83 + I + ++++ + N+++ + IP + ++ P + + + Sbjct: 1 MLIFFSQKLVEILGAAVEGNIPTNLVVSLLWLGIPEMAQLILPLSLFLGLLMTYSKLYVE 60 Query: 84 TELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFS 143 +E+ +++ G + L++ L L++L S + + P +Q+ A+ + + Sbjct: 61 SEITVMNACGIGKKALVQAALLLSLLTSALAAGNVIWLIPWSSVHQEQVLEDAKANPSLA 120 Query: 144 YLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR--DTQTHKIYYAQSGS---IDLDR 198 L E F D + N Q +F+ R Q + A G + Sbjct: 121 ALMEGQFKMSSDRNMVLYLGSVKGNQFQDVFLAQLRPTQDQRPSVVVADKGYTKELPNGN 180 Query: 199 QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNP 258 Q ++L++G + + + +D I F Y S+ + + +S L + Sbjct: 181 QIVVLSEGTRYEGTAVLRDFRITDFNDYQAVIGHRESTINRNRVEQKTMSELWH------ 234 Query: 259 NYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGV 318 +EFH RLT VI ++ + ++ ++ + ++ + V Sbjct: 235 ----SNETESIAEFHWRLTLIFSVVIMAVM---VVPLSEVNPRQGRVLSMLPAMLLY-LV 286 Query: 319 FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTKI 361 F+ +H + P++ ++ + L ++ + + Sbjct: 287 FFLLQSSLHSNGEKGKVDPLIAMWSVNGVYLALAILLNVWDTL 329 >gi|194426241|ref|ZP_03058796.1| putative permease, YjgP/YjgQ family [Escherichia coli B171] gi|194415549|gb|EDX31816.1| putative permease, YjgP/YjgQ family [Escherichia coli B171] gi|195183222|dbj|BAG66767.1| putative permease [Escherichia coli O111:H-] Length = 285 Score = 79.7 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 46/281 (16%), Positives = 103/281 (36%), Gaps = 1/281 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F Y++R + F + ++ + ++ ++ VS + + +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L ++PF + L +++N+EL I +TG S + L IL ++ L + Sbjct: 61 LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + Q+ + A + N+ + + ++ + N G+ I RD Sbjct: 121 VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + Y + D + IL+ + + + I+ ++ S N + + Sbjct: 181 DLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLEILDNLAWQSTFTSMNLEELSM 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLF 281 N ++ L N N + YR ++L +F Sbjct: 241 PGNSFSVRQL-NHYINYLQETGQPSSEYRLALWEKLGHPIF 280 >gi|328948914|ref|YP_004366251.1| permease YjgP/YjgQ family protein [Treponema succinifaciens DSM 2489] gi|328449238|gb|AEB14954.1| permease YjgP/YjgQ family protein [Treponema succinifaciens DSM 2489] Length = 447 Score = 79.3 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 58/354 (16%), Positives = 117/354 (33%), Gaps = 12/354 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 YI + + FL+ +F + +V QIL + +N +LK+ Y +P V+ Sbjct: 81 NILVRYIAKELLLYFLICFVFFFVVFFVNQILLLAETILKKRVPINSVLKLILYCLPNVI 140 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PF + L + + E+LI +G ++K VL + +L+S+F FI + Sbjct: 141 SQSAPFATLVGFLMCLGRLVTDNEILIFRASGQRYSLILKSVLAMGLLISVFSFIMNDYF 200 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLY-------IKISKYNPNNTLQGIF 174 P +L + ++ LE R++D +S ++ + Sbjct: 201 LPIGTLKYNRLFKQIIVSNPAIELESKSIKRMNDSTLVIGNVSKNNVSDIVLFDSEKDGV 260 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + + G I + K+ + IS K + +S Sbjct: 261 QRIIMAGNSDVKKSSTPGVIMQLDMNSPIVLSLDKSKTENYESISAEK-LRLNIFEDSII 319 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYR---PELLETYRSEFHKRLTQWLFPVIFGLISIV 291 SS+ + L+ + L T+ E +K+ + F L++ Sbjct: 320 SSSNGTSPREMTSWDLIKRIKKMKQENSSTKKRLNTFILECNKKFSVPFGSFFFALLAFP 379 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC 345 A + I LS+ + + + +++ F Sbjct: 380 LALIFGKKDGQTLGLIFGIILSVLYWSATIIGQMFGIRGGYNGFW-MMWTPNFV 432 >gi|328544012|ref|YP_004304121.1| permease YjgP/YjgQ [polymorphum gilvum SL003B-26A1] gi|326413756|gb|ADZ70819.1| Permease YjgP/YjgQ [Polymorphum gilvum SL003B-26A1] Length = 363 Score = 79.3 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 44/355 (12%), Positives = 105/355 (29%), Gaps = 13/355 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSST-ESLNILLKISGYLIPTVL 61 + LY R ++ L L + ++ +L+ + S+ + IS +P +L Sbjct: 5 TLTLYFSRRFLKAILGLFLLAAVLIFLFDVLELLRRAGERGDFSVLRITLISLLRVPLLL 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 V PF +++R EL++ G S P + +A+++ + N + Sbjct: 65 EQVLPFAVLFGAIWAFVTLSRALELVVARAAGISVWQFGAPAVLVALIIGLVSVTLYNPM 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-----LYIKISKYNPNNTLQGIFIV 176 + +++A L+ + D + + + + Sbjct: 125 AVWMQERSNEVAAGIFGTEETFLLQTTNAVWIRQDGLDGESVLNAEQLLDHGERLLGVTI 184 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + D ++ L Q L D V+ + + +Y Sbjct: 185 FTFDRAGSFQERIEAREARLRNQFWHLKDVIVYTTESDPQRYGTYEVSTY---LTPTEVR 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + L + Y ++H L + L + LI+ + Sbjct: 242 ESIGAPESISFWNLPR-FIELASRAGLPAYRYTLQYHSLLARPLLLLAMVLIAAAVSL-- 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + R I + F ++ S + P++ + + + Sbjct: 299 RVSRFGGLGGMILGGIIAGFVLY-VLSELGRDFGGAGIVPPLVAAWAPGAFGVLM 352 >gi|320451334|ref|YP_004203430.1| hypothetical protein TSC_c22790 [Thermus scotoductus SA-01] gi|320151503|gb|ADW22881.1| hypothetical membrane spanning protein [Thermus scotoductus SA-01] Length = 336 Score = 79.3 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 53/353 (15%), Positives = 110/353 (31%), Gaps = 20/353 (5%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 Y+L+ + +L+ L V + + ++ S + + K+ Y +P L + Sbjct: 2 LGRYVLKEVLVPYLVGVLLFVALLTFDLLSSLSGVLLSRGAGVEAIAKLILYRLPWTLSL 61 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P L + R +EL G L+KP+ LA+L+S F ++ + P Sbjct: 62 ALPLGLVFAILVGLARLIRQSELKAAYAAGVPPWALLKPLALLALLVSFFNLVNLAELRP 121 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 K Q A+ + L + ++ Q + Sbjct: 122 KALEAYDQHLARLLYGEGGLSGVLRKQLYAAEGLGVYYAEEVRPEVGQNRLYGIRVVDER 181 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 +IY Q G D + G V + F + ES S Sbjct: 182 GRIYSGQEGVWDKEGWHFR---GYVLEGGKPKPFAGTLPFPTQFRPKESLGSRDPYDSTT 238 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 + L R ++ + R ++RL L GL++ Sbjct: 239 LRELWE-----------RSQVEPSARFALYRRLADALGGFFLGLVAAALGLSFRE----- 282 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 F+S+ + ++ + ++ + + +L +++ L + + Sbjct: 283 -AAWAFLSIVLLIFGYYVLWTLSAQLARYDVNPLLAFLPNAFFAALGLYLTWR 334 >gi|301325676|ref|ZP_07219137.1| conserved hypothetical protein [Escherichia coli MS 78-1] gi|300847531|gb|EFK75291.1| conserved hypothetical protein [Escherichia coli MS 78-1] gi|323966511|gb|EGB61944.1| permease YjgP/YjgQ family protein [Escherichia coli M863] gi|327251764|gb|EGE63450.1| hypothetical protein ECSTEC7V_3616 [Escherichia coli STEC_7v] Length = 356 Score = 79.3 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 68/365 (18%), Positives = 143/365 (39%), Gaps = 18/365 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + I QL ++Q L L F D+ I + +N ++ + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDVLIYTST 180 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 +I+ A+S + ++ ++L++G + +D + +++ L + S Sbjct: 181 ANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQSP 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 V + + P + +E R ++ L ++ ++A Sbjct: 241 NVKRKAKSVTELARSAFPAD-----------HAELQWRQSRGLTALLMA---LLAISLSR 286 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIKK 356 + ++ + + + +F+G + IP L+L + L+++ + Sbjct: 287 VKPRQGRFSTLLPLTLLFVAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMGLLMLVAR 346 Query: 357 KYTKI 361 ++ + Sbjct: 347 DFSLL 351 >gi|110634109|ref|YP_674317.1| permease YjgP/YjgQ [Mesorhizobium sp. BNC1] gi|110285093|gb|ABG63152.1| permease YjgP/YjgQ [Chelativorans sp. BNC1] Length = 359 Score = 79.3 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 45/351 (12%), Positives = 103/351 (29%), Gaps = 9/351 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + Y R + + + + +++ + + + L ++ +P ++ Sbjct: 5 TLGRYFFRRYAVITAWNFIGVAALVYIVTFTEITGRAGDLEGFTTSWALGLAALQLPIIM 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PF + L S+NR EL+I G S + P+ F A + + + N I Sbjct: 65 QQAVPFIGLVAAIATLISLNRKYELVIARAAGISAWQFLTPIAFGAFVFGLLTVLVLNPI 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI-VDSRD 180 + ++ + L A + A T + +E + D I + V Sbjct: 125 AARAFASAQMLEATVRGADTSNNAKERWIKQRTDQGETIIGADAALAGGTELVRPVFFII 184 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + S L L D + + + + Sbjct: 185 GDDRIAERLDAASAFLRDGYWELVDVVRRQ---GGNAPEKIATARVPTNLKPEFVGQELT 241 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + ++ L + + + H +T V LI+ A R Sbjct: 242 DPDAVSIFAL-PGMIETAHSFGLRANAFAMQLHSLITLPPLLVAMTLIA--ATVSMRFTR 298 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + I + F ++ S ++ + P + + + ++F Sbjct: 299 MGQSATVILGGVVAGFLLY-VSSVLVRAFGDAGFVPPPIAAWTPVMVAMFF 348 >gi|189485655|ref|YP_001956596.1| permease YjgP/YjgQ family protein [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287614|dbj|BAG14135.1| permease YjgP/YjgQ family protein [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 361 Score = 79.3 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 46/361 (12%), Positives = 118/361 (32%), Gaps = 8/361 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YI + + FL + I + + ++ ++ NL + ++L +P Sbjct: 1 MKILYKYITKIFVKIFLFTTAVIALVGIISELFRQTNLYIDNKTPFYLILIHLLSDMPWW 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + L +++N E+ I G + +I + ++ F + Sbjct: 61 LIQALPISALLALLFALGDLSKNNEITAIKAAGINISRIIILFFIMGFVIGTGDFAIKEF 120 Query: 121 IEPKC--RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 I PK + + + + +L + I I N + V+ Sbjct: 121 IVPKTSLYNKAIEKEKIQKEKINIKTEFYSLIVPALSNTRITIDHLNTEENVMKNIAVEK 180 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + + + + +L +G + + + + + + + + + + Sbjct: 181 YSDKFKIEHLILAEVGIWENDSWLLKNGIIRNFNANFWNETYFEQYNSNIHIKPEHMAMA 240 Query: 239 VLKA-NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + L N + R + R ++ +I I A Sbjct: 241 IQDVNYETMNMHALKKYINQLRLFGQTTVRERIILNIRFAAVYAYIVVMMIGIPFAIGFE 300 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--FCISSIFLLMIK 355 + + ++ ++ ++WG I + +N P + +L S+I + ++ Sbjct: 301 NKLGKILSSTLAMTAAL---IYWGTQAITKSLGENLILSPFIAAWLPNLIFSAIGIYLLI 357 Query: 356 K 356 K Sbjct: 358 K 358 >gi|300824070|ref|ZP_07104191.1| conserved hypothetical protein [Escherichia coli MS 119-7] gi|331669797|ref|ZP_08370642.1| putative permease [Escherichia coli TA271] gi|331679054|ref|ZP_08379726.1| putative permease [Escherichia coli H591] gi|300523460|gb|EFK44529.1| conserved hypothetical protein [Escherichia coli MS 119-7] gi|324119792|gb|EGC13672.1| permease YjgP/YjgQ family protein [Escherichia coli E1167] gi|331062710|gb|EGI34624.1| putative permease [Escherichia coli TA271] gi|331073119|gb|EGI44442.1| putative permease [Escherichia coli H591] Length = 356 Score = 79.3 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 68/365 (18%), Positives = 143/365 (39%), Gaps = 18/365 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + I QL ++Q L L F D+ I + +N ++ + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 +I+ A+S + ++ ++L++G + +D + +++ L + S Sbjct: 181 ANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQSP 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 V + + P + +E R ++ L ++ ++A Sbjct: 241 NVKRKAKSVTELARSAFPAD-----------HAELQWRQSRGLTALLMA---LLAISLSR 286 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIKK 356 + ++ + + + +F+G + IP L+L + L+++ + Sbjct: 287 VKPRQGRFSTLLPLTLLFIAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMGLLMLVAR 346 Query: 357 KYTKI 361 ++ + Sbjct: 347 DFSLL 351 >gi|88703587|ref|ZP_01101303.1| Predicted permease YjgP/YjgQ family protein [Congregibacter litoralis KT71] gi|88702301|gb|EAQ99404.1| Predicted permease YjgP/YjgQ family protein [Congregibacter litoralis KT71] Length = 352 Score = 79.3 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 58/355 (16%), Positives = 111/355 (31%), Gaps = 4/355 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ Y+ R + S L+ L IV I + + + S++ + + +P Sbjct: 1 MRKLNRYVARTVWLSILLVLLVIVGIDGLSAFIDESD-SRSASYGFAEIGRYVMLTMPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + PF + L + +EL+++ G S L VL A+++++F F+ Sbjct: 60 VYEFIPFAALIGALIGLGQLASTSELVVMRAAGISNGRLAWMVLKQALVIAVFGFLLGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I PK + A A+ A E+ ++ R + + N D Sbjct: 120 IAPKAEQQAQSGRAIARYAGRQVDTEQGIWRRDGAVFFHVQAIAPDNEVFGVTAYEFEED 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + +A SG D + L D + S + S + Sbjct: 180 GWMQRALFADSGRY--DGEGWRLRDVQSSEFSRDRVRKASAPALFLPSNITPKILSLENV 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + L L++ + E + + ++L Q LI+I Sbjct: 238 APSQLTLVDLVD-YAAFLRSQGEDVADFELATWRKLMQPAAVAALVLIAISFVFGPLRDG 296 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + I F + + P L L C+ L+ K Sbjct: 297 TLGFRIFAGVMVGILFQLSQDLLGPASLVFGFPPLYAALAPVLSCVLVGLYLLRK 351 >gi|323978945|gb|EGB74025.1| permease YjgP/YjgQ family protein [Escherichia coli TW10509] Length = 356 Score = 79.3 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 68/365 (18%), Positives = 144/365 (39%), Gaps = 18/365 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSVQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + I QL ++Q L L F D+ I + +N ++ + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDVLIYTST 180 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 +I+ A+S + ++ ++L++G + +D + +++ L + S Sbjct: 181 ANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQSP 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 V + + P + +E R ++ L ++ ++A Sbjct: 241 NVKRKAKSVTELARSAFPAD-----------HAELQWRQSRGLTALLMA---LLAISLSR 286 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIKK 356 + ++ + + + +F+G + IP L+L + L+++ + Sbjct: 287 VKPRQGRFSTLLPLTLLFVAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMGLLMLVAR 346 Query: 357 KYTKI 361 ++ + Sbjct: 347 DFSLL 351 >gi|193067274|ref|ZP_03048242.1| putative permease, YjgP/YjgQ family [Escherichia coli E110019] gi|209920456|ref|YP_002294540.1| hypothetical protein ECSE_3265 [Escherichia coli SE11] gi|218555554|ref|YP_002388467.1| hypothetical protein ECIAI1_3129 [Escherichia coli IAI1] gi|218696689|ref|YP_002404356.1| hypothetical protein EC55989_3396 [Escherichia coli 55989] gi|260857120|ref|YP_003231011.1| hypothetical protein ECO26_4088 [Escherichia coli O26:H11 str. 11368] gi|260869742|ref|YP_003236144.1| hypothetical protein ECO111_3809 [Escherichia coli O111:H- str. 11128] gi|293449328|ref|ZP_06663749.1| hypothetical protein ECCG_02359 [Escherichia coli B088] gi|300815538|ref|ZP_07095762.1| conserved hypothetical protein [Escherichia coli MS 107-1] gi|192959231|gb|EDV89666.1| putative permease, YjgP/YjgQ family [Escherichia coli E110019] gi|209913715|dbj|BAG78789.1| conserved hypothetical protein [Escherichia coli SE11] gi|218353421|emb|CAU99487.1| conserved hypothetical protein; putative membrane protein [Escherichia coli 55989] gi|218362322|emb|CAQ99944.1| conserved hypothetical protein; putative membrane protein [Escherichia coli IAI1] gi|257755769|dbj|BAI27271.1| conserved predicted membrane protein [Escherichia coli O26:H11 str. 11368] gi|257766098|dbj|BAI37593.1| conserved predicted membrane protein [Escherichia coli O111:H- str. 11128] gi|291322418|gb|EFE61847.1| hypothetical protein ECCG_02359 [Escherichia coli B088] gi|300531467|gb|EFK52529.1| conserved hypothetical protein [Escherichia coli MS 107-1] gi|320201894|gb|EFW76469.1| Permease Ygh-P1, YjgP/YjgQ family [Escherichia coli EC4100B] gi|323173775|gb|EFZ59404.1| hypothetical protein ECLT68_2093 [Escherichia coli LT-68] gi|323178689|gb|EFZ64265.1| hypothetical protein ECOK1180_2421 [Escherichia coli 1180] gi|323183569|gb|EFZ68966.1| hypothetical protein ECOK1357_3349 [Escherichia coli 1357] gi|323946693|gb|EGB42714.1| YjgP/YjgQ permease [Escherichia coli H120] gi|324018177|gb|EGB87396.1| hypothetical protein HMPREF9542_03232 [Escherichia coli MS 117-3] Length = 356 Score = 79.3 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 68/365 (18%), Positives = 143/365 (39%), Gaps = 18/365 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + I QL ++Q L L F D+ I + +N ++ + Sbjct: 121 GRPWAYTQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 +I+ A+S + ++ ++L++G + +D + +++ L + S Sbjct: 181 ANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQSP 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 V + + P + +E R ++ L ++ ++A Sbjct: 241 NVKRKAKSVTELARSAFPAD-----------HAELQWRQSRGLTALLMA---LLAISLSR 286 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIKK 356 + ++ + + + +F+G + IP L+L + L+++ + Sbjct: 287 VKPRQGRFSTLLPLTLLFIAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMGLLMLVAR 346 Query: 357 KYTKI 361 ++ + Sbjct: 347 DFSLL 351 >gi|215488306|ref|YP_002330737.1| predicted permease [Escherichia coli O127:H6 str. E2348/69] gi|215266378|emb|CAS10815.1| predicted permease [Escherichia coli O127:H6 str. E2348/69] Length = 356 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 68/365 (18%), Positives = 143/365 (39%), Gaps = 18/365 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + I QL ++Q L L F D+ I + +N ++ + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKQFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 +I+ A+S + ++ ++L++G + +D + +++ L + S Sbjct: 181 ANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQSP 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 V + + P + +E R ++ L ++ ++A Sbjct: 241 NVKRKAKSVTELARSAFPAD-----------HAELQWRQSRGLTALLMA---LLAISLSR 286 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIKK 356 + ++ + + + +F+G + IP L+L + L+++ + Sbjct: 287 VKPRQGRFSTLLPLTLLFVAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMGLLMLVAR 346 Query: 357 KYTKI 361 ++ + Sbjct: 347 DFSLL 351 >gi|194333657|ref|YP_002015517.1| permease YjgP/YjgQ family protein [Prosthecochloris aestuarii DSM 271] gi|194311475|gb|ACF45870.1| permease YjgP/YjgQ family protein [Prosthecochloris aestuarii DSM 271] Length = 444 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 49/238 (20%), Positives = 95/238 (39%), Gaps = 6/238 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL+ FL + L I+F+ + I L ++ ++ I + Sbjct: 1 MKIVDRYILKAHAAPFLFAFLTIIFVFTLQFFSLFIARFVGKGLDLLVISELILLQISWM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + T ++ +E+ ++ + G S +I PVL A +L+ + N+ Sbjct: 61 VVLAVPMAVLVSTLMAFGNLTNRSEIAVMRSGGLSMSRVILPVLIAASVLAFLVERFNNV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 + P+ K L L EN F D I + +P++ L+G+ I + Sbjct: 121 VLPEANYQAKMLLRDITKTKPSFGLTENAFSSFIDGYSILVRDIDPDSGELRGVTIYEGT 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAII----LNDGEVHR-KSPISKDISIMKFKSYTLQTES 232 + A++GSI + + L +GE+H ++ +M F + S Sbjct: 181 RDDYSTVITAETGSISFTQDSHYLIMELYNGEIHEMIMNTKEEYRLMSFSRHRFVFSS 238 Score = 53.9 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 11/107 (10%), Positives = 29/107 (27%) Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 + L+ + + + + Y E+HK+ +IF L+ Sbjct: 327 MLEELDASIDRISADRRMYNKYMVEYHKKYALSFACIIFVLVGAPLGVLAKRGGFGVGAG 386 Query: 307 PIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + + + ++ + +P + L L Sbjct: 387 LALAFFVLYWALLILGEHLADRNLLHPGFAMWLANILMAFIGGVAYW 433 >gi|157147734|ref|YP_001455052.1| hypothetical protein CKO_03538 [Citrobacter koseri ATCC BAA-895] gi|157084939|gb|ABV14617.1| hypothetical protein CKO_03538 [Citrobacter koseri ATCC BAA-895] Length = 366 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 47/354 (13%), Positives = 127/354 (35%), Gaps = 19/354 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G SR L+K + LA+ + ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSRAVLVKAAMVLALFTGVVAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + + + + + + +F+ R Sbjct: 122 PWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSAVLFIESVDGSDFKDVFLAQIRPKG 181 Query: 183 T--HKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F++Y + Sbjct: 182 NARPSVVVADSGHLTQLRDGSQVVTLNKGTRFEGTALLRDFRITDFQNYQAIIGHQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L + R+E H R+T + L+ Sbjct: 242 DPNDTDQMDMRTLWQTD----------TNRARAELHWRITLVFTVFMMALM---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + ++ ++ + ++ + F + + + P+++++ + + L Sbjct: 289 VNPRQGRVLSMLPAMLLYLLFFLLQTSLKSNGGK-GKLDPVIWMWAVNLIYLAL 341 >gi|313157781|gb|EFR57192.1| permease, YjgP/YjgQ family [Alistipes sp. HGB5] Length = 500 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 43/234 (18%), Positives = 97/234 (41%), Gaps = 6/234 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ +L+ +++ ++F+ + + + I+ + S I++++ Y + + Sbjct: 1 MKTIHKLVLKAYLGPMVLTFFIVMFVLMMNIVWRYIDELVGKGLSAGIIIELMTYFMANM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+ P + + ++ N ELL + + G S I + KP++ L L+S+ F N Sbjct: 61 IPLGLPLAMLLAAIMTMGNLGENYELLAMKSAGMSLIRITKPLIILVSLISVGSFFIGNN 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + ++ LFF D++ I++S+ P L ++ Sbjct: 121 LVPYANKKVFSILYDIRQQKQSLEFQDGLFFNGIDNMSIRVSRQEPETHLLHDVLIYDNR 180 Query: 181 --TQTHKIYYAQSGSIDLDRQAII----LNDGEVHRKSPISKDISIMKFKSYTL 228 A SG I L L +GE + ++ S+ + K + + Sbjct: 181 AANGDMNTIVADSGYIRLSDDKKYLLVTLFNGETYEQTRSSQWFTQSKLRHHIF 234 Score = 42.3 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 29/253 (11%), Positives = 74/253 (29%), Gaps = 4/253 (1%) Query: 105 FLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKY 164 +L + L + + + + + + +K Sbjct: 204 YLLVTLFNGETYEQTRSSQWFTQSKLRHHIFEKQDQVIPMEGFAMGRTDANQFSNSQTKN 263 Query: 165 NPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK 224 + ++ T + Y R +L + R Sbjct: 264 INELQHDIDSLEKMVNSATTRSYEPLLKEQIFSRDNSVLPQPDSLRIDKSRFRDMAAMDS 323 Query: 225 SYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVI 284 TLQ + +N + + + + L + E+HK+++ + +I Sbjct: 324 IATLQMREKERVWNQARTLAKNSRNMFSFDESAAKEALNQLYRSKVEWHKKMSLPVSIMI 383 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFL 343 F LI A A++R+ P+ +S+ + ++ + + ++L Sbjct: 384 FVLIG---APLGAIIRKGGLGLPVVVSIIFFVIYYIISLSGEKLAKEGSWDAVYGMWLST 440 Query: 344 FCISSIFLLMIKK 356 F ++ I + + K Sbjct: 441 FILTPIAIYLTYK 453 >gi|296115280|ref|ZP_06833920.1| permease YjgP/YjgQ family protein [Gluconacetobacter hansenii ATCC 23769] gi|295978183|gb|EFG84921.1| permease YjgP/YjgQ family protein [Gluconacetobacter hansenii ATCC 23769] Length = 372 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 113/357 (31%), Gaps = 15/357 (4%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y+ R + ++ I+ + V+ +L+ + + S L+ +L + +P + P Sbjct: 19 YLTRELLSKIFITAAVIIALMEVLALLEEVTEIMSRHLGLSGVLYYAVIRLPLLFGNAMP 78 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + L + + E+ I+ G S L + L + L + + ++ + P R Sbjct: 79 LAVLIGALITLVQLTSSNEISIMRAAGLSTAGLFRLFLPAVLGLGVLCVVVDDQVAP--R 136 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ---- 182 S I Q A + + +++FR L + L + + D Sbjct: 137 SEIAQARWWNSTAPAPNGVTRDVWFRTGMTLVNIGGVAHGGRELHDVTVYRRDDEGALQK 196 Query: 183 ----THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 Y+ S D +L+ V + + + S Sbjct: 197 VIHLPTVRYFINRWSGVPDHALTVLSPTRVEDVALQDDTRLTLDWPRALTPDVLLQMSEN 256 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + + L N P + + +E R+ L + L++I Sbjct: 257 TPLSIMTMVRVLHNAFP-----SSQSPAFFMTEILGRIMLPLTFTVMLLLAIPVVYIPPR 311 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 R + + + F VF G + P + + + I + ++++ Sbjct: 312 AGARSWLPVWCLGAGLVFVVFQGLLRALGNAGTLPSVVAVFVGIVIFILGVVTVLLR 368 >gi|261416539|ref|YP_003250222.1| permease YjgP/YjgQ family protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372995|gb|ACX75740.1| permease YjgP/YjgQ family protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326800|gb|ADL26001.1| putative membrane protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 478 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 50/254 (19%), Positives = 106/254 (41%), Gaps = 6/254 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+L+ + FL S I F+ V +++ ++ V S + +L+I + +L Sbjct: 2 ILVRYVLKELIGPFLASLFGITFLFVVDFLVKILDNVLSKGLPTSTVLEIFVLNLAWMLS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + + M+ + E+ + G S ++L++PVL +A+LLS+ + + N + Sbjct: 62 LSIPMAVLVASLMTFGRMSGDQEITAVKAAGISPLSLMRPVLLVALLLSVLMVVFNNWVL 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSRDT 181 P+ +L +++ + + +++ +P + TL GI I + Sbjct: 122 PEANHRSVELMNAVSRKKPHVFIDAGRLITQFPGVQLWVNRIDPVSGTLYGIQIFEMEKK 181 Query: 182 QTHKIYYAQSGSIDLDRQ----AIILNDGEVHRKSPISKD-ISIMKFKSYTLQTESANSS 236 +I YA S S+D + L GE H P D ++F S L ++ + Sbjct: 182 GAPRIVYADSASMDYVDNGATLMLRLRSGETHLVDPDDSDNYFRIRFFSQDLAMQNVDDR 241 Query: 237 TIVLKANDQNLSFL 250 + ++ + Sbjct: 242 LERRSRSYRSDREM 255 Score = 50.8 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 15/99 (15%), Positives = 30/99 (30%), Gaps = 2/99 (2%) Query: 263 ELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGF 322 + Y E HK+ + IF LI I I + G Sbjct: 344 KRAAQYMVEIHKKFSTAFACFIFVLIGAPLGIMARKGGIGTGILYSLAFFVIYWICLIGG 403 Query: 323 SYIIHKIEQNPYYIPILYLFLFCISSIFL--LMIKKKYT 359 + ++ +P + + I L M++ +++ Sbjct: 404 ENLADRLIVSPELAMWISNIIIGAVGILLTRAMVRDRFS 442 >gi|326567797|gb|EGE17901.1| putative ABC transporter permease protein YjgP/YjgQ [Moraxella catarrhalis 12P80B1] Length = 369 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 43/373 (11%), Positives = 108/373 (28%), Gaps = 18/373 (4%) Query: 1 MK--SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIP 58 MK Y++R + + + + + V L ++ +S T +L L Y P Sbjct: 1 MKSWILPKYVIRSALLAMAGAVVGLWLVQMVFAYLAELDNISE-TYTLTDALLFILYRSP 59 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 L P + L + ++EL+++ G S ++ + A++ Sbjct: 60 YFLVQFIPTGTLLGAVIGLGLLANHSELIVMRAAGMSIYRIVSWAMLPAVIFVAISLGVN 119 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 + P + A + D+ + Y N G Sbjct: 120 QFVLPTANQHAATIRADTIYDKLITIDGYWSVNHDGDNQDVVYISYADNEGGLGEVKRYQ 179 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-----------DISIMKFKSYT 227 + L + ++N + +S + + K T Sbjct: 180 LKDGQLIAALKAKSGVYLPQSDDVMNAQKARYTWQLSGIDEIGIGTSQVQQAHSEGKILT 239 Query: 228 LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGL 287 L + + + D +LS L + ++ + F ++L + L Sbjct: 240 LPIAPTDVYLLTKEPEDLSLSSLY-AHRQLMAHQGTRSLRHELAFWQKLLSPFAVLSLVL 298 Query: 288 ISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCIS 347 ++ + + + + F + + ++ L +S Sbjct: 299 VASSFVFGSLRSQGLALRVVLALLTGLLFSYLTDLTGFVALA--TGLSPLLMALVPIVLS 356 Query: 348 SI-FLLMIKKKYT 359 ++ + ++ +K + Sbjct: 357 AMAGMYLLNRKSS 369 >gi|110643219|ref|YP_670949.1| putative permease [Escherichia coli 536] gi|170683865|ref|YP_001745245.1| YjgP/YjgQ permease [Escherichia coli SMS-3-5] gi|194436786|ref|ZP_03068886.1| putative permease, YjgP/YjgQ family [Escherichia coli 101-1] gi|218706607|ref|YP_002414126.1| hypothetical protein ECUMN_3464 [Escherichia coli UMN026] gi|256024434|ref|ZP_05438299.1| hypothetical protein E4_13749 [Escherichia sp. 4_1_40B] gi|293406597|ref|ZP_06650523.1| conserved hypothetical protein [Escherichia coli FVEC1412] gi|298382336|ref|ZP_06991933.1| conserved hypothetical protein [Escherichia coli FVEC1302] gi|300900317|ref|ZP_07118496.1| conserved hypothetical protein [Escherichia coli MS 198-1] gi|312968688|ref|ZP_07782897.1| conserved hypothetical protein [Escherichia coli 2362-75] gi|331684626|ref|ZP_08385218.1| putative permease [Escherichia coli H299] gi|110344811|gb|ABG71048.1| putative permease [Escherichia coli 536] gi|170521583|gb|ACB19761.1| putative permease, YjgP/YjgQ family [Escherichia coli SMS-3-5] gi|194424268|gb|EDX40255.1| putative permease, YjgP/YjgQ family [Escherichia coli 101-1] gi|218433704|emb|CAR14621.1| conserved hypothetical protein; putative membrane protein [Escherichia coli UMN026] gi|291426603|gb|EFE99635.1| conserved hypothetical protein [Escherichia coli FVEC1412] gi|298277476|gb|EFI18992.1| conserved hypothetical protein [Escherichia coli FVEC1302] gi|300356207|gb|EFJ72077.1| conserved hypothetical protein [Escherichia coli MS 198-1] gi|312286906|gb|EFR14817.1| conserved hypothetical protein [Escherichia coli 2362-75] gi|331078241|gb|EGI49447.1| putative permease [Escherichia coli H299] Length = 356 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 68/365 (18%), Positives = 143/365 (39%), Gaps = 18/365 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + I QL ++Q L L F D+ I + +N ++ + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 +I+ A+S + ++ ++L++G + +D + +++ L + S Sbjct: 181 ANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQSP 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 V + + P + +E R ++ L ++ ++A Sbjct: 241 NVKRKAKSVTELARSAFPAD-----------HAELQWRQSRGLTALLMA---LLAISLSR 286 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIKK 356 + ++ + + + +F+G + IP L+L + L+++ + Sbjct: 287 VKPRQGRFSTLLPLTLLFVAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMGLLMLVAR 346 Query: 357 KYTKI 361 ++ + Sbjct: 347 DFSLL 351 >gi|326559486|gb|EGE09909.1| putative ABC transporter permease protein YjgP/YjgQ [Moraxella catarrhalis 7169] gi|326568201|gb|EGE18283.1| putative ABC transporter permease protein YjgP/YjgQ [Moraxella catarrhalis BC8] Length = 369 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 43/373 (11%), Positives = 108/373 (28%), Gaps = 18/373 (4%) Query: 1 MK--SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIP 58 MK Y++R + + + + + V L ++ +S T +L L Y P Sbjct: 1 MKSWILPKYVIRSALLAMAGAVVGLWLVQMVFAYLAELDNISE-TYTLTDALLFILYRSP 59 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 L P + L + ++EL+++ G S ++ + A++ Sbjct: 60 YFLVQFIPTGTLLGAVIGLGLLANHSELIVMRAAGMSIYRIVSWAMLPAVIFVAISLGVN 119 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 + P + A + D+ + Y N G Sbjct: 120 QFVLPTANQHAAAIRADTIYDKLITIDGYWSVNHDGDNQDVVYISYADNEGGLGEVKRYQ 179 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-----------DISIMKFKSYT 227 + L + ++N + +S + + K T Sbjct: 180 LKDGQLIAALKAKSGVYLPQSDDVMNAQKARYTWQLSGIDEIGIGTSQVQQAHSEGKILT 239 Query: 228 LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGL 287 L + + + D +LS L + ++ + F ++L + L Sbjct: 240 LPIAPTDVYLLTKEPEDLSLSSLY-AHRQLMAHQGTRSLRHELAFWQKLLSPFAVLSLVL 298 Query: 288 ISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCIS 347 ++ + + + + F + + ++ L +S Sbjct: 299 VASSFVFGSLRSQGLALRVVLALLTGLLFSYLTDLTGFVALA--TGLSPLLMALVPIVLS 356 Query: 348 SI-FLLMIKKKYT 359 ++ + ++ +K + Sbjct: 357 AMAGMYLLNRKSS 369 >gi|114328862|ref|YP_746019.1| hypothetical protein GbCGDNIH1_2198 [Granulibacter bethesdensis CGDNIH1] gi|114317036|gb|ABI63096.1| hypothetical membrane spanning protein [Granulibacter bethesdensis CGDNIH1] Length = 370 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 41/363 (11%), Positives = 102/363 (28%), Gaps = 23/363 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTVL 61 + YI R + L+ + + + + ++ + ++ S ++ I+ +P + Sbjct: 6 TLSSYITRVFLAAALVVLVALTLLVGLFDFIELLRRAATKPDVSFGLVSTIAALRLPWMS 65 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF + + R++EL++ G S + + A LL + + + Sbjct: 66 ITILPFAVLLGGIGAFWRLTRSSELVVARAAGISAWQFLALPVGAAALLGMLAMTVISPL 125 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFR-------------LDDDLYIKISKYNPNN 168 S +QL + N Sbjct: 126 SSVMLSRAEQLDNTYLRTSGGPMRLAGGQLWLRQSDPGLDPHGVSIIHAMQVAAHKNSLQ 185 Query: 169 TLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 + + + A + + + +L++ V R S + + Sbjct: 186 ASSITVFRLDSEDRLVQRIEAATARLVSGQ--WVLDNARVLRPSHLPDPPHTV---EIPT 240 Query: 229 QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 + + L + + +R F L L L+ Sbjct: 241 DLTVRRIQESFASPDTLSFWSLPD-FIRLLDRSGFSSLRHRLRFQSLLALPLLCATMALV 299 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 + A R+ I ++ F +F S + + Q+ +L + ++ Sbjct: 300 A--AGFSMRPSRRGGVAKMIGSGVAAGFCLFVV-SKVAEEFGQSGTVPVVLAAWAPSVAG 356 Query: 349 IFL 351 + L Sbjct: 357 LML 359 >gi|271498968|ref|YP_003331993.1| permease YjgP/YjgQ family protein [Dickeya dadantii Ech586] gi|270342523|gb|ACZ75288.1| permease YjgP/YjgQ family protein [Dickeya dadantii Ech586] Length = 372 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 49/361 (13%), Positives = 132/361 (36%), Gaps = 19/361 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETFKSQVAILFILLLIFFCQKLVRILGAAVDGDIPTNLVLSLLGLGVPQMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ G S+ L+K L LA+L + + + Sbjct: 62 LILPLSLFLGLLMTFGRLYAESEITVMHACGLSKNVLLKAALVLALLTASLATANVLWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV--DSRD 180 P ++ A+A+ + L E F + D + + +F+ R+ Sbjct: 122 PWSSRHQDEVLAEARANPGMASLAEGQFQQTQDGNSVLFVGKVNGGDFERVFLAQLHPRE 181 Query: 181 TQTHKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A G++ Q + L+ G + + + +D I F +Y + Sbjct: 182 NTRPSVVVADKGTVAARGDGSQVVTLSKGTRYEGTAMLRDFRITDFINYQAIVGYQQVAV 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L + R+EFH RLT + +++++ Sbjct: 242 DPTNVEQMSFKTLWRSSDIAA----------RAEFHWRLTLIFSVL---MMAVMVVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ ++ + ++ + F S + + P+++++L + + L ++ Sbjct: 289 VNPRQGRVLSMLPAMLLYLVFFLLQSSLRSNAGK-GKLDPMVWMWLTNLVYLSLAVLLNL 347 Query: 358 Y 358 + Sbjct: 348 W 348 >gi|328950000|ref|YP_004367335.1| permease YjgP/YjgQ family protein [Marinithermus hydrothermalis DSM 14884] gi|328450324|gb|AEB11225.1| permease YjgP/YjgQ family protein [Marinithermus hydrothermalis DSM 14884] Length = 378 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 51/382 (13%), Positives = 109/382 (28%), Gaps = 39/382 (10%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YILR F L V + + +L R + L++ Y +P V Sbjct: 1 MTRLDRYILREAFPPFAFGLLLYVGLILLSNLLGRAQWLV--GVEFWGLVRWLWYQVPFV 58 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + T ++R ELL+I G + + + A +L Sbjct: 59 LNQTLPVAVLLATLLAYGRLSRENELLVIQAGGLPLLRTARWLFVAAFVLVGVSLYMSET 118 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ L + + ++Y+ ++ Sbjct: 119 LIPRANERAAVLWWDELTSKGNGLARLAGQDVPVGPYRLFFARYDYRTKEMVGVRLELWQ 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKF---KSYTLQTESANSST 237 +T + +A G ++ +R L + + + + F + Sbjct: 179 GETLAVIFADRGRLEENR----LRLVNFRQYTLDLTRLPLPDFASLEEAEQHLRRLVRMQ 234 Query: 238 IVLKANDQNLSFLLNPNPNNPNYR-------------------------PELLETYRSEF 272 V + + L+ LL + + P R +F Sbjct: 235 NVARDPSRTLTVLLPKTRSQLLAQHGGGGFEDANPISYWYERIQKTVNSPREHLEARVQF 294 Query: 273 HKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN 332 H L ++ ++++ A R+ F I ++ + + N Sbjct: 295 HSMLAVPFANLVVLVLALPIAV-----RKAGSTGLAFGYSLIVTIGYYLVFTLGKLLALN 349 Query: 333 PYYIPILYLFLFCISSIFLLMI 354 P L + + ++ L + Sbjct: 350 GVVPPELGAWGANLLALGLAWV 371 >gi|319898730|ref|YP_004158823.1| hypothetical protein BARCL_0559 [Bartonella clarridgeiae 73] gi|319402694|emb|CBI76240.1| conserved membrane protein of unknown function [Bartonella clarridgeiae 73] Length = 363 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 42/355 (11%), Positives = 109/355 (30%), Gaps = 13/355 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLV-SSSTESLNILLKISGYLIPTVL 61 + Y + L + + +I + + + ++ IS IP ++ Sbjct: 5 TLGRYFFVLYLKKICYFLLGVFILTLLIDFTENSSRLELLPHYTVKGAFLISLLRIPFIM 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF +L S+N+ EL++ + G S + P F A LL +F + N + Sbjct: 65 QQLFPFIALFSAMTMLISLNQKLELVVARSIGISAWQFLMPACFGAFLLGLFSILFVNPL 124 Query: 122 EPKCRSTIKQLSAKAQLAL-----TFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 S +++ A + + + + I I Sbjct: 125 AAWSSSQAEKMIAAWRSNNIEISTSNTRIPWLTQQTNLGRTTIGAKSITHQGLSLIDAIF 184 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + L A +L +G +++ + + ++ K++ + + Sbjct: 185 VQYNENATVKNWINTKKATLTNGAWLLTNGTIYKIGQTPEKFTELRLKTH---LKPEFLT 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L + + + V LI+ + K Sbjct: 242 EHLADPVTIPFYKLPEK-IAVARSFGYSANKFDMHLQSLIASPILLVAMTLIAATVSLK- 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + + + + I+ + + S ++ Y PI+ ++ + ++ Sbjct: 300 --FTRFGQSRTLILGGVIAGFILYVISVLVRSFGNAGYIPPIIAAWVPVVVALSF 352 >gi|126031979|gb|ABN71555.1| putative permease [uncultured bacterium] Length = 365 Score = 78.9 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 45/348 (12%), Positives = 109/348 (31%), Gaps = 2/348 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTV 60 ++ YI + + L +V + ++ +L + S S L +P + Sbjct: 9 RTLTRYIAKLFVVRVVGVLLMLVLVLQMLDLLSESGKILSQPGNSEAQLWTYVSLRLPQL 68 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P+ + T L ++N+N+E++ + G S ++ P+L A+ +S + Sbjct: 69 VARFLPYSALLATIITLATLNQNSEVVAMKAAGLSAHQVLAPLLLTALGVSATSLAFNEL 128 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + + +K A + + D + + + + + + V Sbjct: 129 VVTRSSAALKAWQAVDYGVVPRGSAGRTNVYTRDGNDILTAASVSGEGSAMRLVGVTFYR 188 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + S + + S + S + Sbjct: 189 RDVNGAIREKIVSPRANFAQPGWRLEQPVAFDVASVQQKPIAPLVVARAVTPVQVSISTI 248 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 A+ QN+ L + ++ +L+ L + L+ +AA A Sbjct: 249 DADGQNIVQLGR-SIAALKANGRRTSELEGKWWHKLSGPLSAALMPLLGAIAAFGLARSG 307 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 Q + ++L ++ V + + P I FL + Sbjct: 308 QLLIRAVLGMALGFTYFVVDNAALAMGNFGGYPPLIAAWAPFLLFLLI 355 >gi|325282729|ref|YP_004255270.1| permease YjgP/YjgQ family protein [Deinococcus proteolyticus MRP] gi|324314538|gb|ADY25653.1| permease YjgP/YjgQ family protein [Deinococcus proteolyticus MRP] Length = 347 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 44/356 (12%), Positives = 97/356 (27%), Gaps = 9/356 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YIL + + ++M L V + + + L Y +PT+ Sbjct: 1 MSRLTRYILLDVLKWYVMGFLLFVVLQMTDVLSLTAGAFLDYNATPQQALSTLLYNLPTL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M ++E+ + G ++L+ P+ +L+ F + Sbjct: 61 LNRSLVLAVPFAVLLSFGRMQGDSEIKAMYAAGVRPLSLVWPLALPFLLVGALTFWNSGW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + E + + L+ + Q + Sbjct: 121 VAPWANARWYDAWYDIYGMTPEPPTREMYAYSEGETLFY-AGRVASGEEPQQALLSGVMV 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + ++ A SG+ + Q L G + + S L ++ Sbjct: 180 QRGGEVITADSGTWNTATQTWTLT-GAWVTRPGETPQPSA-----EPLTFVQKDTLAPPR 233 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 DQ L +P + T + R VIF + Sbjct: 234 PEADQLSRAELRAELADPTLQGAERRTLEHQLAGRTADSFTAVIFA--LAAGLLGLLMPG 291 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + + + + + + + P + L +F + + L + Sbjct: 292 RAWAFAAVLLVVVVYYVPWTLGPQLAAGGALTPALVAWLPNLIFIVLAAALAWRLR 347 >gi|24114288|ref|NP_708798.1| hypothetical protein SF3027 [Shigella flexneri 2a str. 301] gi|30064335|ref|NP_838506.1| hypothetical protein S3228 [Shigella flexneri 2a str. 2457T] gi|24053444|gb|AAN44505.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|30042592|gb|AAP18316.1| hypothetical protein S3228 [Shigella flexneri 2a str. 2457T] gi|281602371|gb|ADA75355.1| putative permease [Shigella flexneri 2002017] gi|313648098|gb|EFS12544.1| hypothetical protein SF2457T_3698 [Shigella flexneri 2a str. 2457T] gi|332752656|gb|EGJ83041.1| hypothetical protein SFK671_3614 [Shigella flexneri K-671] gi|332753042|gb|EGJ83426.1| hypothetical protein SF434370_3221 [Shigella flexneri 4343-70] gi|332765462|gb|EGJ95680.1| hypothetical protein SF293071_3544 [Shigella flexneri 2930-71] gi|332999939|gb|EGK19522.1| hypothetical protein SFK218_4003 [Shigella flexneri K-218] gi|333014895|gb|EGK34240.1| hypothetical protein SFK304_3820 [Shigella flexneri K-304] Length = 356 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 68/365 (18%), Positives = 142/365 (38%), Gaps = 18/365 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + I QL ++Q L L F D+ I + +N ++ + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 +I+ A S + ++ ++L++G + +D + +++ L + S Sbjct: 181 ANRTRIFRAGSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQSP 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 V + + P + +E R ++ L ++ ++A Sbjct: 241 NVKRKAKSVTELARSAFPAD-----------HAELQWRQSRGLTALLMA---LLAISLSR 286 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIKK 356 + ++ + + + +F+G + IP L+L + L+++ + Sbjct: 287 VKPRQGRFSTLLPLTLLFIAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMGLLILVAR 346 Query: 357 KYTKI 361 ++ + Sbjct: 347 DFSLL 351 >gi|319404055|emb|CBI77643.1| conserved membrane hypothetical protein [Bartonella rochalimae ATCC BAA-1498] Length = 363 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 44/357 (12%), Positives = 112/357 (31%), Gaps = 13/357 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + Y ++ L + + +I + + ++ + IS IP ++ Sbjct: 5 TLGRYFFMLYLKTVCFFLLGVFILVLLIDFTENSSKLALLPHYTAKGAFLISLLRIPLIM 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF +L S+N+ EL++ + G S + P F A L +F + N + Sbjct: 65 QQLFPFIALFSAITMLISLNKKLELVVARSIGISAWQFLAPACFGAFLFGLFSILFINPL 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-----LYIKISKYNPNNTLQGIFIV 176 S K++ A+ + + L + + + Sbjct: 125 AAWSSSQAKKMIAEWRSNSAQISTTDTRIPWLTQHTNLGRITVGAKSIIYQDLSLIDATF 184 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + L A +L +G +++ + + ++ K++ Sbjct: 185 VQYNENATVKNWINTKKATLTDGAWLLTNGTIYKIGQTPEKFTELRIKTHLKPEFLTEYL 244 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 T + L + + + V LI+ + K Sbjct: 245 TDPITIPFYTLP----KKIAVARSLGYSANKFDMHLQSLIALPMLLVAMTLIAATVSLK- 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + + + + + I+ + + S ++ Y PI+ ++ I ++F + Sbjct: 300 --IPRFGQSRTLILGGVIAGFILYVISMLVQSFGNAGYIPPIIAAWVPVIVALFFAI 354 >gi|237729198|ref|ZP_04559679.1| YjgP [Citrobacter sp. 30_2] gi|226908927|gb|EEH94845.1| YjgP [Citrobacter sp. 30_2] Length = 366 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 48/361 (13%), Positives = 130/361 (36%), Gaps = 19/361 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ SI ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMVLALFTSIIAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + + + + + + +F+ R Sbjct: 122 PWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSNFKDVFLAQIRPKG 181 Query: 183 T--HKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F+ Y + Sbjct: 182 NARPSVVVADSGHLTQMRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + N+ L + + R+E R+T + L+ Sbjct: 242 DPNDTDQMNMRTLWTTDTD----------RARAELTWRITLVFTVFMMALM---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ ++ + ++ + F + + + P+ +++ ++ + L ++ Sbjct: 289 VNPRQGRVLSMLPAMLLYLLFFLVQTSLKSNGGK-GKLDPVFWMWTVNLAYLALAIVLNL 347 Query: 358 Y 358 + Sbjct: 348 W 348 >gi|307718797|ref|YP_003874329.1| permease YjgP/YjgQ family protein [Spirochaeta thermophila DSM 6192] gi|306532522|gb|ADN02056.1| permease YjgP/YjgQ family protein [Spirochaeta thermophila DSM 6192] Length = 361 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 45/361 (12%), Positives = 109/361 (30%), Gaps = 5/361 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + L FL + L V I +I + + + + +L + +P Sbjct: 1 MRVITRFALSWFLPLFLAALLSFVTILELIDLFTNLVAYIDADLTTFQILHLQLLYLPKC 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P L S++ + EL+ + G S + P + +L S F E + Sbjct: 61 VTYSLPIATLFAVAFSLGSLHASNELIALFGAGISLYRFVLPFVVCGLLFSGAYFFIEEL 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + ++L A + + + ++ L + +Y+ + +V +D Sbjct: 121 LAIPSLTQKQELMAILMGRTSPTQVVNVTLVGEENRLVVHTRRYDDRSHTITRVLVYEKD 180 Query: 181 TQTH--KIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + A+ G+ D D++ +L + ++ F+ Sbjct: 181 EEGEFASRIEAERGTWDPDQREWVLQRVRRY-IRDEEGNLKEESFEKLRTDLGEIQPEDF 239 Query: 239 VLKANDQNLSFLLNP--NPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + + L ++++KR++ I L++ A + Sbjct: 240 LQTRHSIDKMTLAEAGRWIQTLKRAGLPYREALTDYYKRISFAFTSFIVALLATSVAGRF 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + + P L + +F SI Sbjct: 300 KANALLLSLLLSLSIGVSYYVFQMVTTLFAKLGYLPPVVGAWLPVLVFFSGSILFFKYIA 359 Query: 357 K 357 + Sbjct: 360 R 360 >gi|26249548|ref|NP_755588.1| hypothetical protein c3717 [Escherichia coli CFT073] gi|170018761|ref|YP_001723715.1| permease YjgP/YjgQ family protein [Escherichia coli ATCC 8739] gi|254162934|ref|YP_003046042.1| hypothetical protein ECB_02856 [Escherichia coli B str. REL606] gi|300916913|ref|ZP_07133616.1| conserved hypothetical protein [Escherichia coli MS 115-1] gi|300923637|ref|ZP_07139665.1| hypothetical protein HMPREF9548_01830 [Escherichia coli MS 182-1] gi|300950816|ref|ZP_07164702.1| conserved hypothetical protein [Escherichia coli MS 116-1] gi|300958361|ref|ZP_07170502.1| hypothetical protein HMPREF9547_04075 [Escherichia coli MS 175-1] gi|301643654|ref|ZP_07243695.1| conserved hypothetical protein [Escherichia coli MS 146-1] gi|307139670|ref|ZP_07499026.1| hypothetical protein EcolH7_16283 [Escherichia coli H736] gi|312972759|ref|ZP_07786932.1| conserved hypothetical protein [Escherichia coli 1827-70] gi|331643681|ref|ZP_08344812.1| putative permease [Escherichia coli H736] gi|26109956|gb|AAN82161.1|AE016766_249 Hypothetical protein c3717 [Escherichia coli CFT073] gi|169753689|gb|ACA76388.1| permease YjgP/YjgQ family protein [Escherichia coli ATCC 8739] gi|242378536|emb|CAQ33322.1| ybl136 [Escherichia coli BL21(DE3)] gi|253974835|gb|ACT40506.1| conserved hypothetical protein [Escherichia coli B str. REL606] gi|253978990|gb|ACT44660.1| conserved hypothetical protein [Escherichia coli BL21(DE3)] gi|284923007|emb|CBG36099.1| putative permease [Escherichia coli 042] gi|300314945|gb|EFJ64729.1| hypothetical protein HMPREF9547_04075 [Escherichia coli MS 175-1] gi|300415883|gb|EFJ99193.1| conserved hypothetical protein [Escherichia coli MS 115-1] gi|300420078|gb|EFK03389.1| hypothetical protein HMPREF9548_01830 [Escherichia coli MS 182-1] gi|300449911|gb|EFK13531.1| conserved hypothetical protein [Escherichia coli MS 116-1] gi|301078038|gb|EFK92844.1| conserved hypothetical protein [Escherichia coli MS 146-1] gi|309703416|emb|CBJ02755.1| putative permease [Escherichia coli ETEC H10407] gi|310332701|gb|EFP99914.1| conserved hypothetical protein [Escherichia coli 1827-70] gi|323936015|gb|EGB32310.1| permease YjgP/YjgQ family protein [Escherichia coli E1520] gi|323941918|gb|EGB38097.1| permease YjgP/YjgQ family protein [Escherichia coli E482] gi|331037152|gb|EGI09376.1| putative permease [Escherichia coli H736] gi|332344939|gb|AEE58273.1| conserved hypothetical protein [Escherichia coli UMNK88] Length = 356 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 68/365 (18%), Positives = 143/365 (39%), Gaps = 18/365 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + I QL ++Q L L F D+ I + +N ++ + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 +I+ A+S + ++ ++L++G + +D + +++ L + S Sbjct: 181 ANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLIDHQGRDDNEQIYRNLQLHLNPLDQSP 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 V + + P + +E R ++ L ++ ++A Sbjct: 241 NVKRKAKSVTELARSVFPAD-----------HAELQWRQSRGLTALLMA---LLAISLSR 286 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIKK 356 + ++ + + + +F+G + IP L+L + L+++ + Sbjct: 287 VKPRQGRFSTLLPLTLLFIAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMGLLMLVAR 346 Query: 357 KYTKI 361 ++ + Sbjct: 347 DFSLL 351 >gi|157156628|ref|YP_001464444.1| YjgP/YjgQ permease [Escherichia coli E24377A] gi|256019096|ref|ZP_05432961.1| hypothetical protein ShiD9_09279 [Shigella sp. D9] gi|332280199|ref|ZP_08392612.1| YjgP/YjgQ permease [Shigella sp. D9] gi|157078658|gb|ABV18366.1| putative permease, YjgP/YjgQ family [Escherichia coli E24377A] gi|332102551|gb|EGJ05897.1| YjgP/YjgQ permease [Shigella sp. D9] Length = 356 Score = 78.5 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 68/365 (18%), Positives = 144/365 (39%), Gaps = 18/365 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + I QL ++Q L L F D+ I + +N ++ + Sbjct: 121 GRPWAYTQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 +I+ A+S + ++ ++L++G + +D + +++ L + + S Sbjct: 181 ANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLKPLDQSP 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 V + + P + +E R ++ L ++ ++A Sbjct: 241 NVKRKAKSVTELARSAFPAD-----------HAELQWRQSRGLTALLMA---LLAISLSR 286 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIKK 356 + ++ + + + +F+G + IP L+L + L+++ + Sbjct: 287 IKPRQGRFSTLLPLTLLFIAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMGLLMLVAR 346 Query: 357 KYTKI 361 ++ + Sbjct: 347 DFSLL 351 >gi|222034703|emb|CAP77445.1| hypothetical protein LF82_488 [Escherichia coli LF82] gi|312947541|gb|ADR28368.1| hypothetical protein NRG857_14790 [Escherichia coli O83:H1 str. NRG 857C] Length = 356 Score = 78.5 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 68/365 (18%), Positives = 142/365 (38%), Gaps = 18/365 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYASVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + I QL ++Q L L F D+ I + +N ++ + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 +I+ A+S + ++ ++L++G + +D + +++ L + S Sbjct: 181 ANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQSP 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 V + + P + +E R ++ L ++ ++A Sbjct: 241 NVKRKAKSVTELARSAFPAD-----------HAELQWRQSRGLTALLMA---LLAISLSR 286 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIKK 356 + ++ + + + +F+G + IP L+L + L+++ + Sbjct: 287 VKPRQGRFSTLLPLTLLFIAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMGLLMLVAR 346 Query: 357 KYTKI 361 ++ + Sbjct: 347 DFSLL 351 >gi|332754457|gb|EGJ84823.1| hypothetical protein SF274771_3587 [Shigella flexneri 2747-71] Length = 356 Score = 78.5 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 68/365 (18%), Positives = 142/365 (38%), Gaps = 18/365 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + I QL ++Q L L F D+ I + +N ++ + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 +I+ A S + ++ ++L++G + +D + +++ L + S Sbjct: 181 ANRTRIFRAGSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQSP 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 V + + P + +E R ++ L ++ ++A Sbjct: 241 NVKRKAKSVTELARSAFPAD-----------HAELQWRQSRGLTALLMA---LLAISLSR 286 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIKK 356 + ++ + + + +F+G + IP L+L + L+++ + Sbjct: 287 VKPRQGRFSTLLPLTLLFIAIFYGCDVCRTLVANGAIPLIPGLWLVPGLMLMGLLILVAR 346 Query: 357 KYTKI 361 ++ + Sbjct: 347 DFSLL 351 >gi|330994315|ref|ZP_08318243.1| Lipopolysaccharide export system permease protein lptG [Gluconacetobacter sp. SXCC-1] gi|329758782|gb|EGG75298.1| Lipopolysaccharide export system permease protein lptG [Gluconacetobacter sp. SXCC-1] Length = 369 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 44/353 (12%), Positives = 105/353 (29%), Gaps = 7/353 (1%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y+ R + + + +V + ++ +L+++ + L +L + +P + P Sbjct: 16 YLSREMMGKVFATAVIVVSLMEILSLLEQVTEIMHRHLGLTGVLYYAVMRLPLLFCNAMP 75 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + L M + E+ I+ G S LIK L I L I + + + P+ Sbjct: 76 IAVLIGALLALVQMTTSNEIAIMRAAGLSTPGLIKLFLPTTIALGILCGLVNDQVTPRTE 135 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 + +D + I + R + K+ Sbjct: 136 QA-LAQWWNVTTPGAIAEAHNYWVRSGNDLISIHFLGSGASVLGDVTVYHRDRQSLLQKV 194 Query: 187 YYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + +L+ R + + + + + Sbjct: 195 TTLDTARYVHGHWYGTPTRMLSVISPTRIDLLDVPPGQSIRLDWPDTLTPGYITQLTIS- 253 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 Q++S +L+ + + +E R+ L + L+++ R Sbjct: 254 FTQSISTMLDEEAGRL-PSSQSPSFFLTEILGRIMLPLTFTVMLLLAVPVVYIPPRAGIR 312 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + + F VF G + P + I L I + ++++ Sbjct: 313 SWLPVWCLGAGLLFVVFQGLLRALGNAGTLPSLMAIFVGILIFILGVITVLLR 365 >gi|302338546|ref|YP_003803752.1| permease YjgP/YjgQ family protein [Spirochaeta smaragdinae DSM 11293] gi|301635731|gb|ADK81158.1| permease YjgP/YjgQ family protein [Spirochaeta smaragdinae DSM 11293] Length = 360 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 63/355 (17%), Positives = 117/355 (32%), Gaps = 3/355 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK +L +LR +S +F F+ ++++ + + +L +L S P Sbjct: 1 MKKLDLMVLRAFFHILFLSLMFFSFVVVLVELFSNLWRYLQNDAALAEILFTSLLYYPKA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P L S N ELL + ++G S + P++ L+ LLS+ + + Sbjct: 61 ITLALPPSILFAIAFTLGSYQANNELLALFSSGVSLLRFTVPIIVLSALLSVGSYFFQEY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + + L+ + + + + KI YN N V RD Sbjct: 121 LVIPKSAQKQILTDRLSGRSSVGNNNNVVILSGEGRFLYKIDYYNAKNRSLTGVSVLIRD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 +Q + +S D + + K ++ F +Y S + S+ Sbjct: 181 SQGNFTKRIESEWAQCDESGEWVFHRVRLFEVLSDKRVTEQFFLTYRNPELSESPSSFRK 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEF---HKRLTQWLFPVIFGLISIVAADKRA 297 + N R E Y E ++R + L P+I L+SI + Sbjct: 241 QIGSVNELQRKEAQVWIERLRKSGSERYHKELTAYYERFSFSLTPLIVALLSISLSGYFK 300 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 + I + + P LF S+FLL Sbjct: 301 KNILLMSLLSSVIVSVLYYVSEMVLVLFAQLGIIRPITGAWTSALLFLCISLFLL 355 >gi|153004269|ref|YP_001378594.1| permease YjgP/YjgQ family protein [Anaeromyxobacter sp. Fw109-5] gi|152027842|gb|ABS25610.1| permease YjgP/YjgQ family protein [Anaeromyxobacter sp. Fw109-5] Length = 360 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 39/362 (10%), Positives = 101/362 (27%), Gaps = 13/362 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R +F+ + +V I + + + +L++ V+ Sbjct: 2 ILFGYVARRTLNAFVGALAGVVAIFLAVDFVDNSAAFTGPGW-APAVLELYVNKAAVVVR 60 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 V P + +++ R E + G L PV+ + +L L + ++ Sbjct: 61 QVAPAAMILGAGIAVSTFRRTREYTAMRAVGLGPWRLAVPVVAVTLLAGGALLLVHDLWG 120 Query: 123 PKCRSTIKQLSAKAQLALTFSYL----EENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 + +++ A E + D + + Sbjct: 121 VEAAQRAEEIQALRFGRGGDRRRFEAAREPKRWFRGGDGRRVYHLRGTSPEGGFAHVTVL 180 Query: 179 RDTQTHKIYYAQSG-SIDLDRQAIILNDGEVHRKSPISK-DISIMKFKSYTLQTESANSS 236 ++ ++ + + +L E P + + Y + Sbjct: 181 EVSEAFRLVRRVDAERMRPEGDRWLLEHVEDRTFLPDGTVRVERAASRRYDFPEPPDAFA 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + LL+ + + E + RL V + A Sbjct: 241 VVPGRPTQMRWQTLLSQ-IGIRRRLGLPVAELQLERYNRLAYPFAGV--PGAMLALALAL 297 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF--LFCISSIFLLMI 354 R+ + S+ +S +FWG + + + + P + + + L + Sbjct: 298 RRNRKGHIAAALVESVGVS-LLFWGTQGVTWAMGLSGHVAPWVAAWAPNLVFLVVGALAV 356 Query: 355 KK 356 ++ Sbjct: 357 RR 358 >gi|291284363|ref|YP_003501181.1| Permease YjgP/YjgQ family protein precursor [Escherichia coli O55:H7 str. CB9615] gi|301017325|ref|ZP_07182089.1| conserved hypothetical protein [Escherichia coli MS 69-1] gi|331654591|ref|ZP_08355591.1| putative permease [Escherichia coli M718] gi|331664594|ref|ZP_08365500.1| putative permease [Escherichia coli TA143] gi|290764236|gb|ADD58197.1| Permease YjgP/YjgQ family protein precursor [Escherichia coli O55:H7 str. CB9615] gi|300400298|gb|EFJ83836.1| conserved hypothetical protein [Escherichia coli MS 69-1] gi|320656364|gb|EFX24271.1| Permease YjgP/YjgQ family protein precursor [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661735|gb|EFX29143.1| Permease YjgP/YjgQ family protein precursor [Escherichia coli O55:H7 str. USDA 5905] gi|320666886|gb|EFX33862.1| Permease YjgP/YjgQ family protein precursor [Escherichia coli O157:H7 str. LSU-61] gi|331047973|gb|EGI20050.1| putative permease [Escherichia coli M718] gi|331058525|gb|EGI30506.1| putative permease [Escherichia coli TA143] Length = 356 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 68/365 (18%), Positives = 143/365 (39%), Gaps = 18/365 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + I QL ++Q L L F D+ I + +N ++ + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 +I+ A+S + ++ ++L++G + +D + +++ L + S Sbjct: 181 ANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQSP 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 V + + P + +E R ++ L ++ ++A Sbjct: 241 NVKRKAKSVTELARSVFPAD-----------HAELQWRQSRGLTALLMA---LLAISLSR 286 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIKK 356 + ++ + + + +F+G + IP L+L + L+++ + Sbjct: 287 VKPRQGRFSTLLPLTLLFIAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMGLLMLVAR 346 Query: 357 KYTKI 361 ++ + Sbjct: 347 DFSLL 351 >gi|218665831|ref|YP_002426599.1| YjgP/YjgQ family protein [Acidithiobacillus ferrooxidans ATCC 23270] gi|218518044|gb|ACK78630.1| YjgP/YjgQ family protein [Acidithiobacillus ferrooxidans ATCC 23270] Length = 373 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 63/362 (17%), Positives = 133/362 (36%), Gaps = 11/362 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + ++R + SFL++ L ++ I + Q+ Q + V+S L+I+L++ G +PT+ Sbjct: 1 MTRIRMQVVRNLTISFLLTSLVVLAILAIGQLTQLLRQVASGQLPLSIILRLLGLALPTL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L MV P F V +++ R+ E++ I +TGT L+ PV +A + I Sbjct: 61 LVMVLPLAFFFAVYLVFSNLYRSNEMVAIRSTGTGLSGLLPPVAVVAACVFCLELILSLS 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + ++ S + A + L+ F L I + + N+ + I S Sbjct: 121 WAPGAQRELQSESVRLANAAAEAMLQPGSFTNLPGGRVIYVGQAVGKNSHRFQEIFLSVA 180 Query: 181 TQTHKIY----YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 Y + ++L DG+ + P ++ F Y + ++ ++ Sbjct: 181 QGGQLDMATAAYGEVKPAQDGALTLVLVDGQRYLGQPGKAGFKVLSFARYRVLLDNQDTG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + + L + SE RL L + + Sbjct: 241 GAEPGGINWSSASLPQLVR---QLHGTGMRFAVSELEWRLLWPLALPLLA--LLAIPLAY 295 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIH--KIEQNPYYIPILYLFLFCISSIFLLMI 354 + R + + + + V Y+ P + +L++ L ++ Sbjct: 296 SEPRGGGRAAGMLVGILFLLAVNNIVVYVKEHMMNGSMPIFPGLLWVLLLILAVAAYAFF 355 Query: 355 KK 356 ++ Sbjct: 356 RR 357 >gi|237745416|ref|ZP_04575896.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] gi|229376767|gb|EEO26858.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] Length = 347 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 38/327 (11%), Positives = 119/327 (36%), Gaps = 16/327 (4%) Query: 32 ILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDN 91 +++ + + + + ++ + G+ +P++ + V+T +++E+++ Sbjct: 3 LIRILGQAAKGRVASDDVMALIGFTSLNYMPIILILTGFVSVLLVVTRSYQDSEMVVWFA 62 Query: 92 TGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFF 151 +G S ++PV+ A+ + + + + P + + + + + F Sbjct: 63 SGLSLTRWLRPVMEFALPIVVLVTLLGFFATPWAYRQSAEYRERFEKREDIARISPGKFQ 122 Query: 152 RLDD-DLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQ---AIILNDGE 207 + K + + + ++S +Q+G+++ + + ++L DG Sbjct: 123 ESAAAQRVFFVEKMSEDLSKVKNVFINSSRNGKITTVVSQNGTLETNEKGEKFVVLEDGI 182 Query: 208 VHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLET 267 + ++P D IM+F+ YT TI + + L + + Sbjct: 183 RYDETPDQSDFRIMEFEKYTAYIAPKGEVTISDISTRSMTTLELVTDTTSKKLG------ 236 Query: 268 YRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH 327 E R+ + L++I + + + + I++ + S+I Sbjct: 237 ---ELVWRIGLPFMATLLMLLAIPLGF---VNPRAGRSFNLIIAVLLYMTYSNLSSFIQA 290 Query: 328 KIEQNPYYIPILYLFLFCISSIFLLMI 354 + Q + + L ++ ++++ Sbjct: 291 YVAQQKLAFGLAWWPLHLSVALVIVLL 317 >gi|153007032|ref|YP_001381357.1| permease YjgP/YjgQ family protein [Anaeromyxobacter sp. Fw109-5] gi|152030605|gb|ABS28373.1| permease YjgP/YjgQ family protein [Anaeromyxobacter sp. Fw109-5] Length = 358 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 44/362 (12%), Positives = 103/362 (28%), Gaps = 9/362 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y R +F+ S +V I + + + + +L++ V+ Sbjct: 2 ILFRYAARRTFAAFVGSLAGVVAIFLAVDFVDNSASFTGPGW-IPAVLELYANKTAVVVR 60 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 V P + +++ R E + G L PV + +L L + ++ Sbjct: 61 QVAPAAMVLGAAIAVSTFRRTREYTAMRALGLGPWRLAGPVAAVTLLAGAALVVVHDVWG 120 Query: 123 PKCR---STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + I+ + E +FR D I + V + Sbjct: 121 VEATARAEEIRATRFSRGVRQFQQAREPKRWFRSRDGRRIYHLGASLPGGGFARVTVLAV 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK-DISIMKFKSYTLQTESANSSTI 238 + + D A +L + + P + + Y + + Sbjct: 181 TPDFRLAGRIDAARMRPDGDAWMLEEVQDRTFLPDGSVRLERADSRRYEFPEPPEAFAVV 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + + L+ + E ++ E + R+ V + A Sbjct: 241 PGRPSQLRWRTLV-AQIAVRRHLGLATEEFQLERYDRVAYPFAGV--PGALLAVALALRR 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 R+ + S+ +S +FWG + + + P + + + L + + Sbjct: 298 NRKGHVSAALVESVGVS-LLFWGVQGVSFALGLSGRVAPWVAAWAPNALFLALGIAAVRR 356 Query: 359 TK 360 + Sbjct: 357 AR 358 >gi|319407067|emb|CBI80704.1| conserved membrane hypothetical protein [Bartonella sp. 1-1C] Length = 363 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 43/355 (12%), Positives = 112/355 (31%), Gaps = 13/355 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + Y ++ L + + +I + + ++ + IS IP ++ Sbjct: 5 TLGRYFFMLYLKTVCFFLLGVFILVLLIDFTENSSKLAFLPHYTAKGAFLISLLRIPLIM 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF +L S+N+ EL++ + G S + P F A L +F + N + Sbjct: 65 QQLFPFIALFSAITMLISLNKKLELVVARSIGISAWQFLAPACFGAFLFGLFSILFINPL 124 Query: 122 EPKCRSTIKQLSAKAQLAL-----TFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 +++ A+ + T + + + + + Sbjct: 125 AAWSSFQAEKMIAEWRSNNAQTSITGTRIPWLTQHTNLGRITVGAKSIIYQDLSLIDATF 184 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + L A +L +G +++ + + ++ K++ Sbjct: 185 VQYNENATVKNWINTKKATLTDGAWLLTNGTIYKIGQTPEKFTELRIKTHLKPEFLTEYL 244 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 T + NL + + + V LI+ + K Sbjct: 245 TDPITIPFYNLP----KKIAVARSLGYSANKFDMHLQSLIALPMLLVAMTLIAATVSLK- 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + + + + + I+ + + S ++ Y PI+ ++ I ++F Sbjct: 300 --IPRFGQSRTLILGGVIAGFILYVISMLVRSFGNAGYIPPIIAAWVPVIVALFF 352 >gi|167626385|ref|YP_001676885.1| hypothetical protein Fphi_0163 [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|241668816|ref|ZP_04756394.1| hypothetical protein FphipA2_08610 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254877348|ref|ZP_05250058.1| permease [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|167596386|gb|ABZ86384.1| conserved membrane protein of unknown function [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|254843369|gb|EET21783.1| permease [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 352 Score = 78.1 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 58/357 (16%), Positives = 128/357 (35%), Gaps = 9/357 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + YI + + SFL+ L + ++ L +++ + + S L+ I+ Y +P + Sbjct: 3 LNRIDRYIFKTVFSSFLIVSLIFCILFFIFTYLAQVSN-NDTGASNIELIIITIYQLPGI 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P C + L+ + N+E++++ + G S + K V+ + I+ SI + Sbjct: 62 LYTLLPACAMVGALMGLSLLANNSEIIVLRSFGRSTAQIAKGVVLVGIIGSIVTMVFGGY 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + + T +Y +L+ + D + GI ++D Sbjct: 122 IAPVLQK--------LADSNTVAYNTHDLWLKTPDGFMNISNIDPNEGKAYGIRKFITKD 173 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 Q ++ YA+ D A + N V + K I + + + + S + Sbjct: 174 NQVQEVRYAEKAEYVNDATANVFNVSVVTFPNKDVKHIDVKENVYKAIWSNPIPISVAKV 233 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + N + ++ +F + + Q L ++ L+S+ + Sbjct: 234 ITINDNDYLNFTQLTRYMLSNSQAKDSISLKFWQEIFQPLALMVLILLSVPLSIGSTRSS 293 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + +F + I I P + + + + L IK K Sbjct: 294 TLILKLLLGAFFGFAFFIINQIFGPIALILHLPTILGAAGPTVIALILLIYLFIKSK 350 >gi|291296584|ref|YP_003507982.1| permease YjgP/YjgQ family protein [Meiothermus ruber DSM 1279] gi|290471543|gb|ADD28962.1| permease YjgP/YjgQ family protein [Meiothermus ruber DSM 1279] Length = 377 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 53/372 (14%), Positives = 109/372 (29%), Gaps = 26/372 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YILR FL V + +L R + ++ S +LK +P Sbjct: 1 MTRLDRYILREAWPVFLFGLALYVGFGLISNLLPRAQWMGTAELS--SILKWLALQVPYA 58 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 P + + R ELL++ G S + +P L +LLS F Sbjct: 59 TVQAMPIAGLLAVMLAFGRLARENELLVMQAGGISVLRTARPFLLGGLLLSGFSLALSEW 118 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + ++ ++P ++ Sbjct: 119 VVPWANRATALVYWNELIPERTPQFNLVGRELTVGEYILRYEGFDPAKDEFQRVRLERWQ 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPIS-KDISIMKFKSYTLQTESANSSTIV 239 QT + AQ+ + Q I+L D V + + + + Sbjct: 179 NQTMTVILAQTARLQ--GQRIVLRDYRVFTLDFAQLPLPEFASLEQAEAGLQQIFRAQNI 236 Query: 240 LKANDQNLSFLLNPNPN---NPNYRPELLETYRSEFHKRLTQWLFPV------------- 283 + + L + + SE+ ++L P Sbjct: 237 GQPGAELTVRLSRSREDLEVQYAGGGFEVPVPLSEWWRKLQDPRTPPRELREAKAQWHAA 296 Query: 284 ----IFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL 339 + L+ +V A A+ R + ++L ++ + FS + + P L Sbjct: 297 IALALANLMVLVLALPVAVRRATSPGTALGLALVLTIAYYVAFS-AGKVLALSGPLPPEL 355 Query: 340 YLFLFCISSIFL 351 + + + + Sbjct: 356 AAWGANLLGVAV 367 >gi|54113843|gb|AAV29555.1| NT02FT0414 [synthetic construct] Length = 360 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 52/356 (14%), Positives = 111/356 (31%), Gaps = 8/356 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 E Y I +F LFI+ I +++ S ++ ++K IP + Sbjct: 2 ILEKYYNIDIVNTFTSITLFIISIVSANLLIRLFQEAYSQGLGIDSIVKFVILTIPENVS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + N E+ + G + + ++K L + L+I I+ + Sbjct: 62 LVAPIAIFLAIVICFGKYFANNEMFVTIAGGITWMQIVKNTLKPVVALTIITLITVMYLN 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + T+ A S + + + D I I + N ++ Sbjct: 122 PLSKQTLDIYRASLSAKALLSSITDQKIIKAPDGKIIYIGNKSGNTLSDVFLYQNTPQDG 181 Query: 183 THKIYYAQSGSIDLDRQAII--LNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 +K+ A + I D+ A + ++ K+ + + S K + Sbjct: 182 EYKVMTAPTAKIVSDKTAAYIDFMNVNIYTKNSQNSEYSYDNAKKAIYTIFDNSDRDYNH 241 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 D+ L Y++EF R+ + ++ + A R R Sbjct: 242 DRVDR----LYMHTLIENFNDKNNGTAYKAEFLGRINNAISVIVSS--LLALALCRLRPR 295 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 Q K + + ++ + + +L + + I+K Sbjct: 296 QNKYAKLLPSVVVLAIYLCTNMFINTLMANSSVPVWIGFWLPHIFFTIFAVRTIRK 351 >gi|304413752|ref|ZP_07395196.1| inner membrane component LptF of LptABCFG lipopolysaccharide transporter [Candidatus Regiella insecticola LSR1] gi|304283843|gb|EFL92237.1| inner membrane component LptF of LptABCFG lipopolysaccharide transporter [Candidatus Regiella insecticola LSR1] Length = 367 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 58/364 (15%), Positives = 133/364 (36%), Gaps = 19/364 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 YI++ +S + ++ I +++ ++ + +++L G +P + Sbjct: 2 IITKYIIKKTFKSQMAILFILLLIFISQKLIAILSETVNGEIPTHLILSFLGLGLPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P + M+ E+ ++ G S+ +LI L LA+ + I+ Sbjct: 62 LVLPLSLFLGLLITYGKMHTEREITVMHACGFSQNSLILVALILAMGTAALAAINTLWFM 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + ++ + T + L E F D + IF+ + Sbjct: 122 PWSVTYQGKILNDFRANPTLAALIEGQFQSSMDGKTVLFVGAVDGKKFDHIFLAQLQPDG 181 Query: 183 --THKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 I A++G I Q + L+ G + + + +D I FK+Y + + + Sbjct: 182 SRRPSIVIAENGYIAERPDGSQIVTLDKGTRYEGTALLRDFRITDFKNYQVTINPQSITQ 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L + RSEFH RLT +I L+++ Sbjct: 242 NTNTSEQMSIRSLWH----------SSHPDARSEFHWRLTLITSVIIMALLAVPL---SV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ + + ++ + F S + Q P+L+L++ + + L ++ K Sbjct: 289 VNPRQSRTLNMLPAILLYLIFFLLQSSLRSSTAQ-GKLDPLLWLWMVNGAYLALAIVLNK 347 Query: 358 YTKI 361 + + Sbjct: 348 WDSL 351 >gi|331648771|ref|ZP_08349859.1| putative permease [Escherichia coli M605] gi|330909041|gb|EGH37555.1| permease Ygh-P1, YjgP/YjgQ family [Escherichia coli AA86] gi|331042518|gb|EGI14660.1| putative permease [Escherichia coli M605] Length = 356 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 68/365 (18%), Positives = 143/365 (39%), Gaps = 18/365 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + I QL ++Q L L F D+ I + +N ++ + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 +I+ A+S + ++ ++L++G + +D + +++ L + S Sbjct: 181 ANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQSP 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 V + + P + +E R ++ L ++ ++A Sbjct: 241 NVKRKAKSVTELARSVFPAD-----------HAELQWRQSRGLTALLMA---LLAISLSR 286 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIKK 356 + ++ + + + +F+G + IP L+L + L+++ + Sbjct: 287 VKPRQGRFSTLLPLTLLFVAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMGLLMLVAR 346 Query: 357 KYTKI 361 ++ + Sbjct: 347 DFSLL 351 >gi|293412358|ref|ZP_06655081.1| conserved hypothetical protein [Escherichia coli B354] gi|291469129|gb|EFF11620.1| conserved hypothetical protein [Escherichia coli B354] Length = 356 Score = 77.7 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 68/365 (18%), Positives = 142/365 (38%), Gaps = 18/365 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + I QL ++Q L L F D+ I + +N ++ + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 +I+ A+S + ++ ++L++G + +D + ++ L + S Sbjct: 181 ANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRHLQLHLNPLDQSP 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 V + + P + +E R ++ L ++ ++A Sbjct: 241 NVKRKAKSVTELARSVFPAD-----------HAELQWRQSRGLTALLMA---LLAISLSR 286 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIKK 356 + ++ + + + +F+G + IP L+L + L+++ + Sbjct: 287 VKPRQGRFSTLLPLTLLFVAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLIGLLMLVAR 346 Query: 357 KYTKI 361 ++ + Sbjct: 347 DFSLL 351 >gi|260845740|ref|YP_003223518.1| hypothetical protein ECO103_3664 [Escherichia coli O103:H2 str. 12009] gi|257760887|dbj|BAI32384.1| conserved predicted membrane protein [Escherichia coli O103:H2 str. 12009] Length = 356 Score = 77.7 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 68/365 (18%), Positives = 142/365 (38%), Gaps = 18/365 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L ++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALYVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + I QL ++Q L L F D+ I + +N ++ + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 +I+ A+S + ++ ++L++G + +D + +++ L + S Sbjct: 181 ANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQSP 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 V + + P + +E R ++ L ++ ++A Sbjct: 241 NVKRKAKSVTELARSVFPAD-----------HAELQWRQSRGLTALLMA---LLAISLSR 286 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIKK 356 + ++ + + + +F+G + IP L+L + L+++ + Sbjct: 287 VKPRQGRFSTLLPLTLLFIAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMGLLMLVAR 346 Query: 357 KYTKI 361 ++ + Sbjct: 347 DFSLL 351 >gi|87198520|ref|YP_495777.1| permease YjgP/YjgQ [Novosphingobium aromaticivorans DSM 12444] gi|87134201|gb|ABD24943.1| permease YjgP/YjgQ [Novosphingobium aromaticivorans DSM 12444] Length = 366 Score = 77.7 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 44/355 (12%), Positives = 111/355 (31%), Gaps = 1/355 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRIN-LVSSSTESLNILLKISGYLIPTV 60 ++ +YI + + L +V + ++ +L ++++ LL +P + Sbjct: 9 RTLAIYIAKMFAVRIVAVLLMLVLVLQMLDLLSESGAVLAAPGNGQGELLTYVSLRMPQL 68 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P+ + T L ++N+N+E++ + G S ++ P+ +A S+ F Sbjct: 69 VSRFLPYSVLLATIITLMTLNQNSEVIAMKAAGLSAHQVLAPLFLVAAATSVVTFAFNER 128 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I + ST+K + ++ + D + + V Sbjct: 129 IVTRSTSTLKAWQDVDYGPIPVESATKSNVWLQDGPNILFARSVAGQGKAMHMTGVSWYR 188 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + E S + + ++ I Sbjct: 189 RDPTGMVTEIVTAPSASYANPGWRFREPVMFDVQSARKTALAASEVFAKSVEPVQVVISR 248 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 D L + ++ +++ L ++ L+ VAA A Sbjct: 249 VDADAESLTQLTGSLAAIRDAGFRTTELDGKWWHKISGPLSALLMPLLGAVAAFGLARSG 308 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 I ++L ++ VF + + P ++ F+ + ++I+ Sbjct: 309 HLFVRAVIGMALGFAYFVFDNAALAMGNFGAYPPFLAAWAPFVLFLLIGETVLIR 363 >gi|218701755|ref|YP_002409384.1| hypothetical protein ECIAI39_3475 [Escherichia coli IAI39] gi|227887687|ref|ZP_04005492.1| inner membrane protein [Escherichia coli 83972] gi|301019930|ref|ZP_07184065.1| conserved hypothetical protein [Escherichia coli MS 196-1] gi|218371741|emb|CAR19592.1| conserved hypothetical protein; putative membrane protein [Escherichia coli IAI39] gi|227835083|gb|EEJ45549.1| inner membrane protein [Escherichia coli 83972] gi|299882028|gb|EFI90239.1| conserved hypothetical protein [Escherichia coli MS 196-1] gi|307555075|gb|ADN47850.1| putative permease [Escherichia coli ABU 83972] Length = 356 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 67/365 (18%), Positives = 143/365 (39%), Gaps = 18/365 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G + L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGNPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + I QL ++Q L L F D+ I + +N ++ + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 +I+ A+S + ++ ++L++G + +D + +++ L + S Sbjct: 181 ANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQSP 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 V + + P + +E R ++ L ++ ++A Sbjct: 241 NVKRKAKSVTELARSAFPAD-----------HAELQWRQSRGLTALLMA---LLAISLSR 286 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIKK 356 + ++ + + + +F+G + IP L+L + L+++ + Sbjct: 287 VKPRQGRFSTLLPLTLLFVAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMGLLMLVAR 346 Query: 357 KYTKI 361 ++ + Sbjct: 347 DFSLL 351 >gi|193062108|ref|ZP_03043204.1| putative permease, YjgP/YjgQ family [Escherichia coli E22] gi|192932328|gb|EDV84926.1| putative permease, YjgP/YjgQ family [Escherichia coli E22] Length = 356 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 68/365 (18%), Positives = 143/365 (39%), Gaps = 18/365 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSSQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + I QL ++Q L L F D+ I + +N ++ + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 +I+ A+S + ++ ++L++G + +D + +++ L + S Sbjct: 181 ANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQSP 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 V + + P + +E R ++ L ++ ++A Sbjct: 241 NVKRKAKSVTELARSVFPAD-----------HAELQWRQSRGLTALLMA---LLAISLSR 286 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIKK 356 + ++ + + + +F+G + IP L+L + L+++ + Sbjct: 287 VKPRQGRFSTLLPLTLLFIAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMGLLMLVAR 346 Query: 357 KYTKI 361 ++ + Sbjct: 347 DFSLL 351 >gi|260221417|emb|CBA29959.1| hypothetical protein Csp_A14760 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 367 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 44/330 (13%), Positives = 118/330 (35%), Gaps = 17/330 (5%) Query: 31 QILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIID 90 + L + + + + I++ + + +P + + +V+T M R++E++I Sbjct: 33 RTLGEASRGTFNPADVLIIMGYTVL---SDMPTILSMSLFISVLSVVTRMYRDSEMVIWF 89 Query: 91 NTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLF 150 +G + L++P++ A + + + +I P S I+ L K + +E F Sbjct: 90 GSGRGLLGLVRPLMRFAWPVLVVILALAFLILPWSFSKIEDLRDKYDKRGDIARIEPGQF 149 Query: 151 FRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSG---SIDLDRQAIILNDGE 207 + + + + G + + + + + + ++L +G+ Sbjct: 150 QESGNGDRVFFIEKDSKGQQTGKNVFIATHEGNKETITSARSGTVEVMNGDKFLVLQNGQ 209 Query: 208 VHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLET 267 +S D+++ F+ Y + + ++S ++ + L P+ Sbjct: 210 RLERSSGKNDMTLSTFERYGARVGADDNSARDYAPSNAKTTLELVQTPSAL--------- 260 Query: 268 YRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH 327 + E R L I + AA + + F++ + F + + Sbjct: 261 HMGELSWRAGLALAAFNLIWIGLAAAGANPRAGRSTNLIFAFLAFVVYFNLLVLGKNWVE 320 Query: 328 KIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + IP+L + + +L + K+ Sbjct: 321 NGK--AELIPMLLQLHGGVFLLSMLWLAKR 348 >gi|163868027|ref|YP_001609231.1| hypothetical protein Btr_0826 [Bartonella tribocorum CIP 105476] gi|161017678|emb|CAK01236.1| hypothetical transmembrane protein [Bartonella tribocorum CIP 105476] Length = 363 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 44/355 (12%), Positives = 101/355 (28%), Gaps = 13/355 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + Y + I +A +I + + S + +S IP ++ Sbjct: 5 TLGRYFFIRYLKITCYFWGSIFVLALLIDFTENSGRLPSLPHYTAKDAFLLSVLRIPFIM 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF L S+N+ EL++ + G S + P A LL +F + N + Sbjct: 65 QQLIPFIALFSAMTTLISLNKKLELVVTRSIGVSAWQFLMPACLGAFLLGLFSILLINPL 124 Query: 122 EPKCRSTIKQLSAKAQLAL-----TFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 S +++ + + + + I Sbjct: 125 AAWGFSQAEKMMTEWRNNNVLTSLHNTRIHWLTQRTDLGRTTIGAKFITDQGFSLLDATF 184 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + L A L +G +++ + +++K K+ + + Sbjct: 185 VQYKDDATVKNWINTPKATLTHGAWFLTNGTIYKIGHPPEKFTVLKIKT---NLKPEFLT 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 ++ L + + V LI+ + Sbjct: 242 ERLVNPATIPFYQL-PKKIMIARSFGYSAHNFDMYLQSLIALPALLVAMTLIAATVSL-- 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 R + I + F ++ S ++ Y PI+ + + ++FL Sbjct: 299 NFTRFGQSRTLILGGVIAGFMLY-VISVLVQAFGNAGYIPPIIAAWTPVVIALFL 352 >gi|94984157|ref|YP_603521.1| permease YjgP/YjgQ [Deinococcus geothermalis DSM 11300] gi|94554438|gb|ABF44352.1| permease YjgP/YjgQ [Deinococcus geothermalis DSM 11300] Length = 367 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 57/373 (15%), Positives = 134/373 (35%), Gaps = 19/373 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK FE Y+L I + + ++ + + + I + + + ++ ++ +P Sbjct: 1 MKRFERYVLAEILPPLVGALGVVIVLLLLALLEGVIAPLLAKGANPLLVARLVALNVPEA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P L+ + ++E+ +G L +PVL LA L+++ F + Sbjct: 61 LAQGLPIALMFAALLGLSRLAADSEIKAALASGVPTSRLFRPVLLLAALVTLGTFAINEL 120 Query: 121 IEPKCRSTIKQLSAKAQLALT------FSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF 174 + + + ++ + + L + NL R + I + + P L+ + Sbjct: 121 LVTRAKVQVQSVQREIVLDNPRVIGLGTRDGQGNLVLRDALNRAISVGEALPGGELRDLR 180 Query: 175 IVDSRDTQTHKI-YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE-- 231 IV + + A+ G + + L DG+ ++ ++++ F +L + Sbjct: 181 IVTMQAGLPPREVITARRGRLKPGSNVLELEDGQRITFQ-DARPVTVLTFARGSLPVQDV 239 Query: 232 --SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 S LK L LL + + + + H++ + L + Sbjct: 240 QASFEGGDATLKPIYLPLRELLARMQTYRQQKVQAPADFTA-LHRKFAEPLAALALAFFV 298 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCIS 347 + A + + + +L +SF + +S + +N P+L Y Sbjct: 299 VSLAVFAF---RSGQNLGLVWALLLSFAYYATWSVF-RVMGENGAVPPVLAAYAPDLIAV 354 Query: 348 SIFLLMIKKKYTK 360 LL++ + + Sbjct: 355 LAGLLLLWRASRR 367 >gi|293416425|ref|ZP_06659064.1| permease YjgP/YjgQ family protein [Escherichia coli B185] gi|291431781|gb|EFF04764.1| permease YjgP/YjgQ family protein [Escherichia coli B185] Length = 356 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 67/347 (19%), Positives = 134/347 (38%), Gaps = 18/347 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + I QL ++Q L L F D+ I + +N ++ + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 +I+ A+S + ++ ++L++G + +D + +++ L + S Sbjct: 181 ANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQSP 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 V + + P + +E R ++ L ++ ++A Sbjct: 241 NVKRKAKSVTELARSVFPAD-----------HAELQWRQSRGLTALLMA---LLAISLSR 286 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFL 343 + ++ + + + +F+G + IP L+L Sbjct: 287 VKPRQGRFSTLLPLTLLFIAIFYGGDVCRTLVANGAIPLIPGLWLVP 333 >gi|194426331|ref|ZP_03058886.1| putative permease, YjgP/YjgQ family [Escherichia coli B171] gi|194415639|gb|EDX31906.1| putative permease, YjgP/YjgQ family [Escherichia coli B171] gi|195183223|dbj|BAG66768.1| putative permease [Escherichia coli O111:H-] Length = 356 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 68/365 (18%), Positives = 144/365 (39%), Gaps = 18/365 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSSQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + I QL ++Q L L F D+ I + + +N ++ + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILLQTVDQDNNRLTDALIYTST 180 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 +I+ A+S + ++ ++L++G + +D + +++ L + S Sbjct: 181 ANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQSP 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 V + + P + +E R ++ L ++ ++A Sbjct: 241 NVKRKAKSVTELARSVFPAD-----------HAELQWRQSRGLTALLMA---LLAISLSR 286 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIKK 356 + ++ + + + +F+G + IP L+L + L+++ + Sbjct: 287 VKPRQGRFSTLLPLTLLFIAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMGLLMLVAR 346 Query: 357 KYTKI 361 ++ + Sbjct: 347 DFSLL 351 >gi|126031980|gb|ABN71556.1| putative permease [uncultured bacterium] Length = 402 Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 54/370 (14%), Positives = 139/370 (37%), Gaps = 20/370 (5%) Query: 1 MKSF---ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLI 57 MK F + YI R + L + + + ++L+ + V++ ++++ ++ L+ Sbjct: 1 MKLFTSVDRYIFRLVAMPMLAVFVIAASLLVLDKMLKLFDFVATEGGPVSVVFRMLANLL 60 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 P + P + + ++EL ++ G L++ +A+ L+ + Sbjct: 61 PEYASLAIPIGLMLGILFAFRKLATSSELDVMRAVGLGYGRLLRVPFIMAVGLAGVNLVI 120 Query: 118 ENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIV 176 ++P R +QL + + + ++ F L D + ++I + L GIF+ Sbjct: 121 VGYLQPLSRYYYEQLQFELRSGALGASIKVGEFTTLKDKIALRIERSEDEGRKLMGIFVR 180 Query: 177 DSRDTQTHKIYYAQSGSI-----DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 + D A+ G + D L+DG++ + SP ++ F + L + Sbjct: 181 VADDQGQVLSVSAREGRFLALKDNPDTIVFRLSDGQIVQDSPG-VTPRVLTFSRHDLPID 239 Query: 232 SANSSTIVLK---ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 + + L LL N+ + R+ F+ R+ + + ++ Sbjct: 240 LPALERFRQRGGGEREYLLPELLRLGWNDEVPLTQ-RNINRANFNYRMVEVVMMLLLP-- 296 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSY--IIHKIEQNPYYIPILYLFLFCI 346 ++A ++ +F+S+ + Y I + ++ + + + Sbjct: 297 -LLAVALAVPPKRSTSALGVFVSIVMVVAYHKVNEYGQSIAALGKSGVLLAL-WGPFVVF 354 Query: 347 SSIFLLMIKK 356 +++ + M + Sbjct: 355 AAMIVWMYWR 364 >gi|283834896|ref|ZP_06354637.1| inner membrane protein YjgP [Citrobacter youngae ATCC 29220] gi|291069156|gb|EFE07265.1| inner membrane protein YjgP [Citrobacter youngae ATCC 29220] Length = 366 Score = 77.3 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 47/361 (13%), Positives = 128/361 (35%), Gaps = 19/361 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ SI ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMVLALFTSIIAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A A+ + L + F + + + + + +F+ R Sbjct: 122 PWSSRHQDEVLADAKANPGMAALAQGQFQQATNGSSVLFIESVDGSNFNDVFLAQIRPKG 181 Query: 183 T--HKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F++Y + Sbjct: 182 NARPSVVVADSGHLTQMRDGSQVVTLNKGTRFEGTALLRDFRITDFQNYQAIIGHQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L + + R+E R+T + L+ Sbjct: 242 DPNDTDQMDMRTLWKTDND----------RARAELTWRITLVFTVFMMALM---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ ++ + ++ + F + + + P+ +++ + + L ++ Sbjct: 289 VNPRQGRVLSMLPAMLLYLLFFLVQTSLKSNGGK-GKLDPVFWMWAVNLLYLALAIVLNL 347 Query: 358 Y 358 + Sbjct: 348 W 348 >gi|153827727|ref|ZP_01980394.1| conserved permease [Vibrio cholerae MZO-2] gi|149737798|gb|EDM52703.1| conserved permease [Vibrio cholerae MZO-2] Length = 256 Score = 77.0 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 34/249 (13%), Positives = 90/249 (36%), Gaps = 1/249 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I + + + V ++ +I+ ++++ V + L L IP + Sbjct: 3 KILDWYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGEGSYDLLQALLFVVLSIPRDV 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L ++ ++EL+++ G S++ + VL AI L I + + Sbjct: 63 EMFFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIIVTLLGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + + + + D + +I I+K + Sbjct: 123 APQAQ-KMARDMRAFATSGGAIMSVRTGVWARDANDFIFIAKVENEQLYGLNLWRFDENK 181 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + + +++ + + ++ + + I + + + + +K Sbjct: 182 KLSTVIFSEQVDYVANNEWLMKDAVLTRLVNDIEISKESLPEYRWRTSLAPDKLAVVTVK 241 Query: 242 ANDQNLSFL 250 + +L+ L Sbjct: 242 PEELSLTGL 250 >gi|319405492|emb|CBI79111.1| conserved membrane hypothetical protein [Bartonella sp. AR 15-3] Length = 363 Score = 77.0 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 44/355 (12%), Positives = 111/355 (31%), Gaps = 13/355 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTE-SLNILLKISGYLIPTVL 61 + Y ++ L + + +I + + ++ + IS P ++ Sbjct: 5 TLGRYFFMLYLKTTCCFLLGVFILVLLIDFTENFSKLALLPYYTAKGAFLISLLRTPLII 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF +L S+N+ EL+I + G S + P F A L +F + N + Sbjct: 65 QQLFPFIALFSAITMLISLNKRLELVIARSIGISAWQFLTPACFGAFLFGLFSILFINPL 124 Query: 122 EPKCRSTIKQLSAKAQLAL-----TFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 S +++ A + + + + I + Sbjct: 125 AAWSSSQSEKIVAAWRSNNNQISISNTRIPWLTQHTNLGRTTIGAKSIIHKDLSLIDATF 184 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + L A +L +G +++ K S ++ K++ + + Sbjct: 185 VQYNENATVKNWINTKKAMLTDGAWLLINGTIYKIGQPPKKFSELRIKTH---LKPEFLT 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + L + + + V LI+ + K Sbjct: 242 EYLAEPVTIPFYEL-PKKIAVARSFGYSANKFDMHLQSLIALPMLLVAMTLIAATVSLK- 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + + + + + I+ + + S ++ Y PI+ ++ I ++F Sbjct: 300 --IPRFGQSKTLILGGIIAGFILYVISMLVRSFGNAGYIPPIIAAWVPVIVALFF 352 >gi|91212394|ref|YP_542380.1| hypothetical protein UTI89_C3402 [Escherichia coli UTI89] gi|117625286|ref|YP_854458.1| putative permease [Escherichia coli APEC O1] gi|218560055|ref|YP_002392968.1| hypothetical protein ECS88_3362 [Escherichia coli S88] gi|218691271|ref|YP_002399483.1| hypothetical protein ECED1_3630 [Escherichia coli ED1a] gi|237706273|ref|ZP_04536754.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|91073968|gb|ABE08849.1| hypothetical protein UTI89_C3402 [Escherichia coli UTI89] gi|115514410|gb|ABJ02485.1| putative permease [Escherichia coli APEC O1] gi|218366824|emb|CAR04594.1| conserved hypothetical protein; putative membrane protein [Escherichia coli S88] gi|218428835|emb|CAR09636.1| conserved hypothetical protein; putative membrane protein [Escherichia coli ED1a] gi|226899313|gb|EEH85572.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|294492595|gb|ADE91351.1| putative permease, YjgP/YjgQ family [Escherichia coli IHE3034] gi|307625416|gb|ADN69720.1| hypothetical protein UM146_01455 [Escherichia coli UM146] gi|315288787|gb|EFU48185.1| conserved hypothetical protein [Escherichia coli MS 110-3] gi|323951497|gb|EGB47372.1| permease YjgP/YjgQ family protein [Escherichia coli H252] gi|323957869|gb|EGB53583.1| permease YjgP/YjgQ family protein [Escherichia coli H263] Length = 356 Score = 77.0 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 68/365 (18%), Positives = 142/365 (38%), Gaps = 18/365 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYASVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + I QL ++Q L L F D+ I + +N ++ + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 +I+ A+S + ++ ++L++G + +D + +++ L + S Sbjct: 181 ANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQSP 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 V + + P + +E R ++ L ++ ++A Sbjct: 241 NVKRKAKSVTELARSVFPAD-----------HAELQWRQSRGLTALLMA---LLAISLSR 286 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIKK 356 + ++ + + + +F+G + IP L+L + L+++ + Sbjct: 287 VKPRQGRFSTLLPLTLLFVAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMGLLMLVAR 346 Query: 357 KYTKI 361 ++ + Sbjct: 347 DFSLL 351 >gi|300905893|ref|ZP_07123626.1| hypothetical protein HMPREF9536_03885 [Escherichia coli MS 84-1] gi|301304161|ref|ZP_07210277.1| hypothetical protein HMPREF9347_02761 [Escherichia coli MS 124-1] gi|307310385|ref|ZP_07590033.1| permease YjgP/YjgQ family protein [Escherichia coli W] gi|300402362|gb|EFJ85900.1| hypothetical protein HMPREF9536_03885 [Escherichia coli MS 84-1] gi|300840574|gb|EFK68334.1| hypothetical protein HMPREF9347_02761 [Escherichia coli MS 124-1] gi|306909280|gb|EFN39775.1| permease YjgP/YjgQ family protein [Escherichia coli W] gi|315062299|gb|ADT76626.1| permease YjgP/YjgQ family protein [Escherichia coli W] gi|315256879|gb|EFU36847.1| putative permease [Escherichia coli MS 85-1] gi|323377116|gb|ADX49384.1| permease YjgP/YjgQ family protein [Escherichia coli KO11] Length = 356 Score = 77.0 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 68/365 (18%), Positives = 142/365 (38%), Gaps = 18/365 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + I QL ++Q L L F D+ I + +N ++ + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 +I+ A+S + ++ ++L++G + +D + +++ L S Sbjct: 181 ANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLVQSP 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 V + + P + +E R ++ L ++ ++A Sbjct: 241 NVKRKAKSVTELARSVFPAD-----------HAELQWRQSRGLTALLMA---LLAISLSR 286 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIKK 356 + ++ + + + +F+G + IP L+L + L+++ + Sbjct: 287 VKPRQGRFSTLLPLTLLFIAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMGLLMLVAR 346 Query: 357 KYTKI 361 ++ + Sbjct: 347 DFSLL 351 >gi|323188590|gb|EFZ73875.1| hypothetical protein ECRN5871_3009 [Escherichia coli RN587/1] gi|324005417|gb|EGB74636.1| hypothetical protein HMPREF9532_04927 [Escherichia coli MS 57-2] Length = 356 Score = 77.0 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 68/365 (18%), Positives = 142/365 (38%), Gaps = 18/365 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYASVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + I QL ++Q L L F D+ I + +N ++ + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 +I+ A+S + ++ ++L++G + +D + +++ L + S Sbjct: 181 ANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQSP 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 V + + P + +E R ++ L ++ ++A Sbjct: 241 NVKRKAKSVTELARSVFPAD-----------HAELQWRQSRGLTALLMA---LLAISLSR 286 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIKK 356 + ++ + + + +F+G + IP L+L + L+++ + Sbjct: 287 VKPRQGRFSTLLPLTLLFVAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMGLLMLVAR 346 Query: 357 KYTKI 361 ++ + Sbjct: 347 DFSLL 351 >gi|294084201|ref|YP_003550959.1| permease YjgP/YjgQ [Candidatus Puniceispirillum marinum IMCC1322] gi|292663774|gb|ADE38875.1| permease YjgP/YjgQ [Candidatus Puniceispirillum marinum IMCC1322] Length = 368 Score = 77.0 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 41/360 (11%), Positives = 110/360 (30%), Gaps = 11/360 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINL--VSSSTESLNILLKISGYLIPTV 60 + Y R L+ + I VIQ ++ + V+ S + ++ +P + Sbjct: 9 TLFRYFAFYYTRWILLCLFGLTVIISVIQSVELMRQKSVNKSDVEEISVSVLAMLNLPNI 68 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + ++ PF + T + N++ E ++ G S + PVL A+ + + + N Sbjct: 69 IEVILPFAVLIGTMLCFHAWNKSNEFVVTRGFGQSIWVSLSPVLVSALAIGVLFVMVINP 128 Query: 121 IEPKCRSTIKQLS-----AKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI 175 I + + + + I + Sbjct: 129 IGAVTSKRYNSQMATLNDDISNNLTISESGIWLRDMQDNVKIIINGDALDMKTAQISNPT 188 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + S + Q+ SI L + + DG + ++ + E+ + Sbjct: 189 IYSFVNGFELNWRVQAQSIQLTQMGWEVVDGIKWDSDGLQNELGTFIIPT---NLEAVDL 245 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + + ++ L + + F+K L V +I+ + Sbjct: 246 TRSGQSPHSISIYALPH-FITVLERAGLPTINHEIHFNKILAFPFLLVGISMIATRITVR 304 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 ++ K+ + ++ +F +++ P + + + +++ + Sbjct: 305 SINRGRQMKLVIKGLGIATCIFIFSYLMHVMGTSLTVPALVAGWTPAITVLLIGSIMLAR 364 >gi|293603258|ref|ZP_06685689.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] gi|292818347|gb|EFF77397.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] Length = 372 Score = 77.0 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 44/350 (12%), Positives = 98/350 (28%), Gaps = 25/350 (7%) Query: 22 FIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMN 81 ++ + ++ ++ V S+ LL + IPT L + P + L + Sbjct: 2 ALLGLFTFFALVDDLDNVGDK-FSMMALLYMQALAIPTRLYDLLPIGLLIGAILALAGLA 60 Query: 82 RNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLAL- 140 + EL+I+ +G S + L++ + + I L I + + P + + + Sbjct: 61 QRNELVILRVSGVSGMRLLRMLWVVTIPLMIGAALLSEYVTPWAEIKSGEANLMFRGKAG 120 Query: 141 ----TFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDL 196 Y + + +D + A +G Sbjct: 121 GDRLKSGYWFKEPTANGGMRIINIAELKGDGQVAGITLYEFKKDQTLTVLSTAPTGLFSH 180 Query: 197 DRQAIILNDGEVHRK------------SPISKDISIMKFKSYTLQ--TESANSSTIVLKA 242 +L D R P + S++K T+ + VL Sbjct: 181 GDL--VLKDVSETRLDNDAADALANARQPKNPPASVVKVPERTIDTTLSAERLLARVLTP 238 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 ++ LL+ ++L ++ I+ R+ Sbjct: 239 ERMSIVTLLD-YVEYLRDNQLQYGRQVVALWRKLAYPFTLLVMITIAAPIGLM--QTRRG 295 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 +FI + + G F ++ + + L + L Sbjct: 296 GVGAKVFIGILLGVGFFMLNQLALNVGMLGKWPSWLTALGPNIGAMALAL 345 >gi|306816677|ref|ZP_07450809.1| hypothetical protein ECNC101_08664 [Escherichia coli NC101] gi|305850242|gb|EFM50701.1| hypothetical protein ECNC101_08664 [Escherichia coli NC101] Length = 356 Score = 76.6 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 67/365 (18%), Positives = 145/365 (39%), Gaps = 18/365 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYASVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + I QL ++Q L L F D+ I + +N ++ + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 +I+ A+S + ++ ++L++G + +D + +++ L + + Sbjct: 181 ANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLD-QS 239 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +K ++++ L + +E R ++ L ++ ++A Sbjct: 240 ANVKRKAKSVTEL----------ARSVFPADHAELQWRQSRGLTALLMA---LLAISLSR 286 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIKK 356 + ++ + + + +F+G + IP L+L + L+++ + Sbjct: 287 VKPRQGRFSTLLPLTLLFVAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMGLLMLVAR 346 Query: 357 KYTKI 361 ++ + Sbjct: 347 DFSLL 351 >gi|315138812|dbj|BAJ45971.1| conserved inner membrane protein [Escherichia coli DH1] Length = 366 Score = 76.6 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 47/361 (13%), Positives = 130/361 (36%), Gaps = 19/361 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + LA+ +I ++ Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + L + F + + + + + + +F+ R Sbjct: 122 PWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKG 181 Query: 183 T--HKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A SG + Q + LN G + + +D I F+ Y + Sbjct: 182 NARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTAMLRDFRITDFQDYQAIIGHQAVAL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + ++ L N + + R+E + +T + L+ Sbjct: 242 DPNDTDQMDMRTLWNTDTD----------RARAELNWCITLVFTVFMMALM---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ ++ + ++ + F + + + P L+++ + + L ++ Sbjct: 289 VNPRQGRVLSMLPAMLLYLLFFLIQTSLKSNGGK-GKLDPTLWMWTVNLIYLALAIVLNL 347 Query: 358 Y 358 + Sbjct: 348 W 348 >gi|317401899|gb|EFV82506.1| permease [Achromobacter xylosoxidans C54] Length = 385 Score = 76.6 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 46/361 (12%), Positives = 125/361 (34%), Gaps = 6/361 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ ++ I + ++ + + +++ + + +++L ++ T Sbjct: 20 MSLFKRSVVSEITSHAGVVFSTLLIVWLSVLLVRLLGEAAGGNIGADVVLVLAALSTITA 79 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP + + +T R +E+++ +G S +KPVL +A+ ++I + + Sbjct: 80 LPTILAVSVFIAVLTTVTRNYRESEMVVWFASGLSLADWLKPVLRVAVPVAIAVAGLTLV 139 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P I + + + S + F + ++ T + + Sbjct: 140 AAPWAYRQIGEYHERFEQRSDLSKVTAGQFAESAGGNRVFFAEDPAKPTDELGNVFARET 199 Query: 181 TQTHKIYYAQSGS----IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 S + + + ++L +G + P + +I ++ F+ Y L+ ES Sbjct: 200 GPEWLSVLTASSAHSETLPNGDRFLVLGEGHRYDLKPGTPEIRLVHFEKYGLRLESKGGD 259 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 V +A + P + + S+ R++ L + L++I Sbjct: 260 DPVAEARAAAER--SSKARTTPQLMADNTSSSWSQVMWRISLPLAALNLALLAIPLGAVN 317 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + + + + + I + + + + + + FLLM + Sbjct: 318 PRLGRSGDLLIAGLVGLLYMNLINLSRAWISNGKLSFGVGTVAIHVVVAMFTAFLLMRRL 377 Query: 357 K 357 + Sbjct: 378 R 378 >gi|319941842|ref|ZP_08016164.1| hypothetical protein HMPREF9464_01383 [Sutterella wadsworthensis 3_1_45B] gi|319804775|gb|EFW01642.1| hypothetical protein HMPREF9464_01383 [Sutterella wadsworthensis 3_1_45B] Length = 379 Score = 76.6 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 40/360 (11%), Positives = 123/360 (34%), Gaps = 16/360 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ ++ + + I + +++ +N+ + + ++++ Y LP Sbjct: 2 IFKRSLIAELANLAGAVFTVLFTIVLAVAMVRFLNMAAGGSIEHGTVVQLVLYNALVNLP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTG-TSRITLIKPVLFLAILLSIFLFISENII 121 + + T L ++ E+++ ++G S ++ I+P + A+ + + + + +I Sbjct: 62 PLLAASLFIATLMTLMRSWQDNEMVVWFSSGGRSILSWIEPTVKFALPIVVVIALLSIVI 121 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFR-LDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P R+ +L + + F + + + D Sbjct: 122 SPWARAETDRLRNSVSAREDVNAIAPGRFIEAMGGKRVFFVESAEEGGNQVRNVFMAEGD 181 Query: 181 TQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G+I+ + ++L +G + S I++F SY ++ + Sbjct: 182 WGKESVVTAEKGTIEVNAEGDRYVVLGNGRRYEAQTDSGKTRIVEFGSYGVRLDIRIDRA 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 LL +P +++E R + ++ L++I + Sbjct: 242 FASTKTSSMPIALLIASP---------TPDHQAELLWRFSWPAAALLLALLAIPLSCTSP 292 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 R + ++ + +L + +Q + + + + +++ ++ Sbjct: 293 --RAGRSLNLLMAALVFILYLNALSIVETKIEQQALTFWSGYTVLNGSLLILTVVLFIRR 350 >gi|281180021|dbj|BAI56351.1| conserved hypothetical protein [Escherichia coli SE15] Length = 356 Score = 76.6 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 67/365 (18%), Positives = 145/365 (39%), Gaps = 18/365 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYASVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + I QL ++Q L L F D+ I + +N ++ + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 +I+ A+S + ++ ++L++G + +D + +++ L + + Sbjct: 181 ANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLD-QS 239 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +K ++++ L + +E R ++ L ++ ++A Sbjct: 240 ANVKRKAKSVTEL----------ARSVFPADHAELQWRQSRGLTALLMA---LLAISLSR 286 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIKK 356 + ++ + + + +F+G + IP L+L + L+++ + Sbjct: 287 VKPRQGRFSTLLPLTLLFVAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMGLLMLVAR 346 Query: 357 KYTKI 361 ++ + Sbjct: 347 DFSLL 351 >gi|188494208|ref|ZP_03001478.1| putative permease, YjgP/YjgQ family [Escherichia coli 53638] gi|188489407|gb|EDU64510.1| putative permease, YjgP/YjgQ family [Escherichia coli 53638] Length = 356 Score = 76.6 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 67/347 (19%), Positives = 134/347 (38%), Gaps = 18/347 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSSQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + I QL ++Q L L F D+ I + +N ++ + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 +I+ A+S + ++ ++L++G + +D + +++ L + S Sbjct: 181 ANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQSP 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 V + + P + +E R ++ L ++ ++A Sbjct: 241 NVKRKAKSVTELARSVFPAD-----------HAELQWRQSRGLTALLMA---LLAISLSR 286 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFL 343 + ++ + + + +F+G + IP L+L Sbjct: 287 VKPRQGRFSTLLPLTLLFVAIFYGGDVCRTLVANGAIPLIPGLWLVP 333 >gi|71891828|ref|YP_277557.1| putative transmembrane protein, transport [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71795934|gb|AAZ40685.1| putative transmembrane protein, transport [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 373 Score = 76.6 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 56/357 (15%), Positives = 133/357 (37%), Gaps = 14/357 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F YIL+ I R+ L+ + + + ++++ ++LV S S+ ++ G +P Sbjct: 2 IFTKYILKEIFRNQLIILTLLFLVCFCQKLIKMLSLVIDSGISIYLIFLCLGLNMPESGK 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ PF + ++ + E++ + + + I+ + F + +++ I+ + + Sbjct: 62 LLIPFSVFLSVLVTFYRLHAHNEIIAMYSCAVDKYIFIRSIFFFSGIVATCTMINISWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P C S +L K + + L E F L I S N L+ +F+ + + Sbjct: 122 PYCSSYQSKLLYKIKENINLVILSEKKFQPLATKYLILFSDSIQGNKLKNVFLSKTNPDK 181 Query: 183 THKI---YYAQSGSIDLDRQA---IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + GS+ + IIL G + + + ++ NS+ Sbjct: 182 DNSMFIIITSDQGSVCRNPDGSRLIILKKGTYYEIYNKCELCQDVLITDFSQYQMLINST 241 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 ++++ + R+E H RLT + + +I+ + Sbjct: 242 IKTFYEKNESVDHMFMH-----QLWRSNKSEMRAELHWRLTLLVSIFLMPMITTLLITVV 296 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + + +F+ + S + + N I +++ SI LL+ Sbjct: 297 SYNYLINLLVTVFLYIIFFIFHILLRSCV---LLDNINPIVWMWVINSIYLSIVLLL 350 >gi|157162460|ref|YP_001459778.1| YjgP/YjgQ permease [Escherichia coli HS] gi|157068140|gb|ABV07395.1| putative permease, YjgP/YjgQ family [Escherichia coli HS] Length = 356 Score = 76.6 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 67/347 (19%), Positives = 134/347 (38%), Gaps = 18/347 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSSQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + I QL ++Q L L F D+ I + +N ++ + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTKDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 +I+ A+S + ++ ++L++G + +D + +++ L + S Sbjct: 181 ANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQSP 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 V + + P + +E R ++ L ++ ++A Sbjct: 241 NVKRKAKSVTELARSVFPAD-----------HAELQWRQSRGLTALLMA---LLAISLSR 286 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFL 343 + ++ + + + +F+G + IP L+L Sbjct: 287 VKPRQGRFSTLLPLTLLFVAIFYGGDVCRTLVANGAIPLIPGLWLVP 333 >gi|300931864|ref|ZP_07147161.1| conserved hypothetical protein [Escherichia coli MS 187-1] gi|300460287|gb|EFK23780.1| conserved hypothetical protein [Escherichia coli MS 187-1] Length = 353 Score = 76.6 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 67/365 (18%), Positives = 144/365 (39%), Gaps = 21/365 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + I QL ++Q L L F D+ I + +N ++ + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 +I+ A+S + ++ ++L++G + +D + +++ L + + + Sbjct: 181 ANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLPLDQSPNVK 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 K +++ L +E R ++ L ++ ++A Sbjct: 241 RKAK----SVTEL----------ARSAFPADHAELQWRQSRGLTALLMA---LLAISLSR 283 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIKK 356 + ++ + + + +F+G + IP L+L + L+++ + Sbjct: 284 VKPRQGRFSTLLPLTLLFVAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMGLLMLVAR 343 Query: 357 KYTKI 361 ++ + Sbjct: 344 DFSLL 348 >gi|149178410|ref|ZP_01857000.1| hypothetical protein PM8797T_01869 [Planctomyces maris DSM 8797] gi|148842727|gb|EDL57100.1| hypothetical protein PM8797T_01869 [Planctomyces maris DSM 8797] Length = 392 Score = 76.6 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 57/397 (14%), Positives = 120/397 (30%), Gaps = 50/397 (12%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + Y+L + R F + + + + Q+ +S + ++LKI +++P++ Sbjct: 1 MRLLQRYVLFELLRVFTLMITVLTVLLVFVGAFQQ---ATSQGLGVILVLKILPFIVPSM 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP P + V + + E+ G + ++L+ P L LS+ I + Sbjct: 58 LPFTIPATLLLTVCVVYGRIAGDQEITAAKAAGINVLSLLWPSFILGGFLSLGSLILSDQ 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P I+ A + L N TL S Sbjct: 118 IIPWAEKNIENTIACELETIFLEKLRSQNQIHDPTSGISITVMGVRNKTLLVPTFRYSPP 177 Query: 181 TQTHKIYYAQSGSIDLD--RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + A+ +++ D Q +IL+ + H P F S T Sbjct: 178 NKKPVHLQAEEATLEFDLTNQQVILHISKGHIDFPGKPRF----FVEKDTFPFPLPSQTT 233 Query: 239 VLKANDQNL----SFLLNPNPN----------------------------------NPNY 260 + K ++ S L++ + + Sbjct: 234 MAKPRHMSVKSIKSELVDLSEKKNEFEFQRDIEVAMLLALGDFEHFQSPEVNTDLPQNQF 293 Query: 261 RPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFW 320 + + ++ R F L+ + A R++ + L I + Sbjct: 294 QEKRQNKLKTALSSRFALSCSCFFFVLVGCPFSI--AQARRQFLTSFFLVFLPILLFYYP 351 Query: 321 GFSYIIHKIEQNPYYIPI-LYLFLFCISSIFLLMIKK 356 I+ +Q L+ + + + M++K Sbjct: 352 IVLLAINLAKQGKIEPTWSLWAGNAGLLIVAIHMLRK 388 >gi|296137009|ref|YP_003644251.1| permease YjgP/YjgQ family protein [Thiomonas intermedia K12] gi|295797131|gb|ADG31921.1| permease YjgP/YjgQ family protein [Thiomonas intermedia K12] Length = 377 Score = 76.6 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 48/332 (14%), Positives = 110/332 (33%), Gaps = 5/332 (1%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 +L + R + R+F + + + + +++ + S S + + G + L Sbjct: 2 LLDLTLRREMSRNFGGAFTVLFTVVITLMLIRILGQASDGQASPQDVFLLIGLTALSYLQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V + T M ++E+ I TG R+ L+ VL + + + + Sbjct: 62 IVITLSLFLAVLLTFTRMWLDSEMTIWRTTGVGRLRLMVSVLRFSWPILLLIAALTLFAW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIKISKYNPNNTLQGIFIVDSRDT 181 P L + + S + F I K + + + Sbjct: 122 PWANQQSTALRIRFEQRSDISRVAPGQFRESASGKRVFFIDKGAQAGGVAHDIFIRDDTS 181 Query: 182 QTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + A+S + + ++L++G + +P + +I F S ++ ++ + V Sbjct: 182 GQTVLITARSAQVQRIDGQPFLVLSNGNRYAHTPGQANYTITSFDSLDMRLDATTGLSNV 241 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLE--TYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +++L PN N P + E RL L + L+++ A Sbjct: 242 ADNKTGPVNWLTQPNRNVPTEYLFNPAIPNWLGELSWRLGVPLSAALLALMALPLASGSV 301 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKI 329 + + + I F + I + Sbjct: 302 RTGRAGSLISAILVYLIYFNLLNVLQGWISEG 333 >gi|300973446|ref|ZP_07172202.1| conserved hypothetical protein [Escherichia coli MS 45-1] gi|300410788|gb|EFJ94326.1| conserved hypothetical protein [Escherichia coli MS 45-1] gi|315291260|gb|EFU50620.1| conserved hypothetical protein [Escherichia coli MS 153-1] Length = 356 Score = 76.6 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 67/347 (19%), Positives = 133/347 (38%), Gaps = 18/347 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYASVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + I QL ++Q L L F D+ I + +N ++ + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 +I+ A+S + ++ ++L++G + +D + +++ L + S Sbjct: 181 ANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQSP 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 V + + P + +E R ++ L ++ ++A Sbjct: 241 NVKRKAKSVTELARSVFPAD-----------HAELQWRQSRGLTALLMA---LLAISLSR 286 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFL 343 + ++ + + + +F+G + IP L+L Sbjct: 287 VKPRQGRFSTLLPLTLLFVAIFYGGDVCRTLVANGAIPLIPGLWLVP 333 >gi|241765203|ref|ZP_04763187.1| permease YjgP/YjgQ family protein [Acidovorax delafieldii 2AN] gi|241365132|gb|EER60004.1| permease YjgP/YjgQ family protein [Acidovorax delafieldii 2AN] Length = 365 Score = 76.6 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 55/361 (15%), Positives = 134/361 (37%), Gaps = 14/361 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ I + + RSF + + +V + + +++ + S + S + ++ + G+ + LP Sbjct: 2 LFDSSIRKELARSFGATLVVLVTVVMTMMLIRTLGQASRGSVSPSDVMLVMGFTVLGQLP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + VL+ M R++E++I + G I+L+ P+L A + + + + Sbjct: 62 IILSLSLFVAVVGVLSRMYRDSEMVIWFSGGRGLISLLPPLLRFAWPVMAVIALLSLGVW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + I++L + + + F + + + +T G I + Sbjct: 122 PWANAQIQELKTRYEQRSDIDRIAPGEFQESANGSRVFFIDKDAPDTQVGNNIFIAASNG 181 Query: 183 THKIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + I + +L+ G+ S + I +F Y + A++S Sbjct: 182 PKESVTSARSARLEIRQGERFALLSQGQRLESSSDHPGLKISEFVEYGTRIGGASASATE 241 Query: 240 LKA-NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA-DKRA 297 A + LL + +++E RL L + F ++ + A Sbjct: 242 ELAVKTRATHELLMQPA---------IPAFQAELGWRLGLALAAINFVILGLALASVNPR 292 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 R + + + + G S+I ++ +L+ ++ I L + Sbjct: 293 AGRSGSMLFALLAFVVYYNLMTLGQSWIGAGKLGLLSFMLLLHGGTLIMAGIILAIRHNH 352 Query: 358 Y 358 + Sbjct: 353 W 353 >gi|327398670|ref|YP_004339539.1| permease YjgP/YjgQ family protein [Hippea maritima DSM 10411] gi|327181299|gb|AEA33480.1| permease YjgP/YjgQ family protein [Hippea maritima DSM 10411] Length = 348 Score = 76.2 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 55/351 (15%), Positives = 119/351 (33%), Gaps = 13/351 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YI ++F +S F V + + ++ + + S+ ++ Y P + Sbjct: 1 MKKIHKYITIFFLKTFFISLAFFVLLFVLSDFFSNLSDIVGNGVSIKYIISYYVYYTPFI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + PF FA+ + L ++ E++++ ++G S + KPVLF +I++++ +F S+ + Sbjct: 61 IYFSLPFIFALSSLVSLGYLSSKNEIIVMRSSGLSIFKIAKPVLFFSIIVAVLMFASKEL 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I + F + + ++ N Sbjct: 121 IVNYGLEKASFVKHYYFKNKQFKLGWTKVGNMFIKVNGLNVTNNMAYNVTA----YRVDK 176 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + + II DG + + +S S Sbjct: 177 DFNRVEAIITAKRVKFKPKEIIFIDG--CSFNMPNFSQGRCFKDFKIKTNKSFYSLFSSS 234 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K + ++ L+ ++ + Y S R +I LIS V Sbjct: 235 KFKEPSIKSLVFSYKHSL-----DKDYYLSLIIHRFVYPFSCIILTLISFVFVL--KTNP 287 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 +R S S+ F V+ G +I + + P + + +F + + + Sbjct: 288 RRGGFVKNVFSSSLVFLVYIGSLELISSMGRYSMVDPNISIVIFILFWLSV 338 >gi|317494176|ref|ZP_07952592.1| inner membrane protein yjgP [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917949|gb|EFV39292.1| inner membrane protein yjgP [Enterobacteriaceae bacterium 9_2_54FAA] Length = 366 Score = 76.2 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 50/354 (14%), Positives = 129/354 (36%), Gaps = 19/354 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETFKSQIAILFILLLIFFCQKMVRILGAAVDGEIPTNLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E++++ G + LIK + LA + F ++ + Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEIVVMHACGLGKGVLIKTAMILAFITGAFALVNAFWVS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + + E F D Y+ + +F+ R Sbjct: 122 PWSSFHSDEVMAEAKANPGLASMVEGQFQPSKDGNYVLFVGDVKGKKFENVFLAQLRPNG 181 Query: 183 --THKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A +G + Q ++L+ G + + + +D I F +Y Sbjct: 182 TQRPSVVVADTGHMEGRPDGSQQVVLDTGTRYEGTALLRDFRITDFVNYEAVIGHQAVVL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 A+ + L + N + +R+EFH R+T + L+ Sbjct: 242 NPSNADQAPMQALWDSNEKD----------FRAEFHWRITLVFSVFVMALM---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + ++ ++ + ++ + F S + + P +++++ + L Sbjct: 289 VNPRQGRVLSMLPAMLLYLIFFLLQSSLRSNAAK-GKIDPFIWVWVVNGFYLLL 341 >gi|331659262|ref|ZP_08360204.1| putative permease [Escherichia coli TA206] gi|315297643|gb|EFU56920.1| conserved hypothetical protein [Escherichia coli MS 16-3] gi|331053844|gb|EGI25873.1| putative permease [Escherichia coli TA206] Length = 356 Score = 76.2 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 67/365 (18%), Positives = 145/365 (39%), Gaps = 18/365 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYASVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + I QL ++Q L L F D+ I + +N ++ + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 +I+ A+S + ++ ++L++G + +D + +++ L + + Sbjct: 181 ANRTRIFRARSVDVVDLSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLD-QS 239 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +K ++++ L + +E R ++ L ++ ++A Sbjct: 240 ANVKRKAKSVTEL----------ARSVFPADHAELQWRQSRGLTALLMA---LLAISLSR 286 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIKK 356 + ++ + + + +F+G + IP L+L + L+++ + Sbjct: 287 VKPRQGRFSTLLPLTLLFVAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMGLLMLVAR 346 Query: 357 KYTKI 361 ++ + Sbjct: 347 DFSLL 351 >gi|239809483|gb|ACS26209.1| unknown [uncultured bacterium] Length = 291 Score = 76.2 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 35/295 (11%), Positives = 94/295 (31%), Gaps = 8/295 (2%) Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 + P + L ++ ++EL I+ G S ++ V+ ++L I + + P Sbjct: 1 MLPMAALIGCLIGLGTLASSSELTIMRAAGVSLGRIVVAVMKPMLVLLIAGILIGEYVAP 60 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + AQ A + L+ R +++ + + + + Sbjct: 61 ATEDIAQARRSLAQGAGEAQSSKRGLWHRQENEFVHVNAVQPGGMLVGVTRYRFDDERRL 120 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 +A+ S D +L + ++ + + +Q T+V++ Sbjct: 121 LSSSFARRASYQAD--HWLLENISTTHFRGDHTEVVRTPQERWDVQLTPQLLGTVVMEPE 178 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 +++ L + + Y F ++ Q V L++I Sbjct: 179 ALSITGL-WRYIHYLGEQGLNNGRYWLAFWTKVLQPAVTVALVLLAISFIFGPLRSVTLG 237 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCIS--SIFLLMIKK 356 + + + F + ++ + P+L + L I ++++ Sbjct: 238 QRIFTGVVVGFVFRIIQDLLGPASQVFG---FSPLLAVVLPAGICALIGAWLLRR 289 >gi|225627183|ref|ZP_03785221.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] gi|225618018|gb|EEH15062.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] Length = 397 Score = 76.2 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 43/354 (12%), Positives = 102/354 (28%), Gaps = 12/354 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + Y + L L I +A ++ + + +++ ++ L +S +P ++ Sbjct: 40 TLGRYFFTRYVQITLYFLLGIFALALLLDFTENASRLANLPAYTVWAALGLSAMRVPFIM 99 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF L S+NR EL++ + G S + P F A+L + N + Sbjct: 100 QQMIPFVALFSAMATLISLNRKYELVVARSVGVSAWQFLLPACFGALLFGLATIFILNPL 159 Query: 122 EPKCRSTIK----QLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD 177 S + ++ + + I T Sbjct: 160 AAHGFSKAEEIAAMWKTGKVTDVSALRDPWLRQKTDEGETIIGAKSILNQGTTLADATFI 219 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 D Q + + + L L D ++ ++ + Q Sbjct: 220 QFDEQKNIKDRYDARTATLQDGYWELTDVMRF---ARGQEPQKLETFRISTQLRPEYVEE 276 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + L + + ++ L + LI+ + Sbjct: 277 KLASPETIPFTQLRHK-IEVARSFGYSANAFDMQYQSLLALPALLMAMTLIAATVSL--K 333 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 VR + I + F ++ S ++ + P + ++ + + F Sbjct: 334 FVRFGQSGAMILGGVIAGFVLYVV-SVLVKAFGDAGFVPPFVAAWVPVVIATFF 386 >gi|320195130|gb|EFW69759.1| Permease Ygh-P1, YjgP/YjgQ family [Escherichia coli WV_060327] Length = 356 Score = 76.2 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 68/365 (18%), Positives = 143/365 (39%), Gaps = 18/365 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P +L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYASVGVMLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + I QL ++Q L L F D+ I + +N ++ + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 +I+ A+S + ++ ++L++G + +D + +++ L + S Sbjct: 181 ANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLEHQGRDDNEQIYRNLQLHLNPLDQSP 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 V + + P + +E R ++ L ++ ++A Sbjct: 241 NVKRKAKSVTELARSVFPAD-----------HAELQWRQSRGLTALLMA---LLAISLSR 286 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIKK 356 + ++ + + + +F+G + IP L+L + L+++ + Sbjct: 287 VKPRQGRFSTLLPLTLLFVAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMGLLMLVAR 346 Query: 357 KYTKI 361 ++ + Sbjct: 347 DFSLL 351 >gi|94985285|ref|YP_604649.1| permease YjgP/YjgQ [Deinococcus geothermalis DSM 11300] gi|94555566|gb|ABF45480.1| permease YjgP/YjgQ [Deinococcus geothermalis DSM 11300] Length = 381 Score = 76.2 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 45/382 (11%), Positives = 112/382 (29%), Gaps = 28/382 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+ R + + L I I+ + ++ + GY +P Sbjct: 1 MTRLTRYVTRELLPPLVAGTLLFTAILSFGYFF--ISSQWLRGVPVGLIGQWIGYQLPDT 58 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V P + T + EL+ + + G + +PV +A L++ Sbjct: 59 LVKVLPMAVVLMTVVAFGRLATERELVAVQSGGIGLGQVARPVAVVAALVTALAVWLSLW 118 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ + L S + D+ LQ + + Sbjct: 119 VAPRANVETRGLYWDVLTGAGLSQVVGKTVDLGDNLTLWLGGYDAAGRKLQNVRVERWAK 178 Query: 181 TQ--THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + +A SG+ + +R ++ + ++ + + +T Sbjct: 179 DDPQRTTVIFADSGTFENNRLSLRGYQVYTVNYAAAARLARVPENDPAAFRTAVQEVFPN 238 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETY--RSEFHKRLTQWLFPVIFGL--------- 287 V+ D + + L+ + + + +E L L + Sbjct: 239 VVLPEDASSTLNLDTGLSRKQTIAQYADAIGADAEGWPELITKLTAPGVSVQERQDARVN 298 Query: 288 ----ISIVAA-------DKRALVRQRKKI-HPIFISLSISFGVFWGFSYIIHKIEQNPYY 335 +++ +R + + + I+L I+ + F + P Sbjct: 299 LNRKLALPFGNLVLALAALPFALRFGRTLGVSLGIALLIAVAYYLVFFVGLTLAGAFPRL 358 Query: 336 I-PILYLFLFCISSIFLLMIKK 356 ++L + + L ++++ Sbjct: 359 PEVGVWLANLVFAGLGLWLLRR 380 >gi|224586302|ref|YP_002640101.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224470830|gb|ACN48660.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 359 Score = 76.2 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 48/348 (13%), Positives = 126/348 (36%), Gaps = 19/348 (5%) Query: 9 LRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFC 68 +R +S L ++ I + ++++ + N++L + G +P + ++ P Sbjct: 1 MRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLS 60 Query: 69 FAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRST 128 + L + +E+ ++ G S+ L+K + LA+ I ++ P Sbjct: 61 LFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMVLALFTGILAAVNVMWAGPWSSKH 120 Query: 129 IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT--HKI 186 ++ A+A+ + L + F + + + + + +F+ R + Sbjct: 121 QDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFHDVFLAQIRPKGNARPSV 180 Query: 187 YYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 A SG + Q + LN G + + +D I F++Y + + Sbjct: 181 VVADSGHLTQLRDGSQVVTLNKGTRFEGTALLRDFRITDFQNYQAIIGHQAVALDPNDTD 240 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 ++ L N + + R+E H R+T + L+ + ++ Sbjct: 241 QMDMRTLWNTDND----------RARAELHWRITLVFTVFMMALM---VVPLSVVNPRQG 287 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 ++ + ++ + F + I + P+++++ + + L Sbjct: 288 RVLSMLPAMLLYLLFFLIQTSIKSNGGK-GKLDPVIWMWAVNLIYLAL 334 >gi|332998925|gb|EGK18516.1| hypothetical protein SFVA6_3890 [Shigella flexneri VA-6] Length = 356 Score = 76.2 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 68/365 (18%), Positives = 142/365 (38%), Gaps = 18/365 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + I QL ++Q L L F D+ I + +N ++ + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 +I+ A+S + ++ ++L++G + +D + +++ L + S Sbjct: 181 ANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQSP 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 V + + P + +E R ++ L ++ ++A Sbjct: 241 NVKRKAKSVTELARSAFPAD-----------HAELQWRQSRGLTALLMA---LLAISLSR 286 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIKK 356 + + + + + +F+G + IP L+L + L+++ + Sbjct: 287 VKPWQGRFSTLLPLTLLFIAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMGLLILVAR 346 Query: 357 KYTKI 361 ++ + Sbjct: 347 DFSLL 351 >gi|325278208|ref|ZP_08143701.1| permease YjgP/YjgQ family protein [Pseudomonas sp. TJI-51] gi|324096648|gb|EGB95001.1| permease YjgP/YjgQ family protein [Pseudomonas sp. TJI-51] Length = 241 Score = 76.2 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 31/242 (12%), Positives = 80/242 (33%), Gaps = 3/242 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + + L I+ +A + + + + S T ++ P Sbjct: 1 MAKLDRYIGQSVLLAILAVLGIILGLASLFAFIDEMGDL-SDTYTVMQAGYYVLLTAPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + L S+ ++EL I+ G S ++ V+ ++L + + Sbjct: 60 LYEMLPMAALIGCLIGLGSLASSSELTIMRAAGVSIGRIVWAVMKPMLVLMLVGLLIGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + AQ + ++ R ++ + L + Sbjct: 120 VAPVTENKAQADRSLAQGGGEAQSSKRGMWHRQGEEFVHINAVQPNGLLLGVTRYRFDSE 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + +A+ D +L+D ++ + + + +T++L Sbjct: 180 RKIQTSSFARRAQYTDD--HWLLSDVSTTFFRGDHTEVVKAPTERWDVSLTPQLLNTVIL 237 Query: 241 KA 242 Sbjct: 238 AP 239 >gi|293604027|ref|ZP_06686440.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] gi|292817631|gb|EFF76699.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] Length = 369 Score = 76.2 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 40/362 (11%), Positives = 124/362 (34%), Gaps = 8/362 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ ++ I + ++ + + +++ + + +++L ++ T Sbjct: 1 MSLFKRSVVSEITSHAGVVFSTLLIVWLSVLLVRLLGEAAGGNIGADVVLVLAALSTITA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP + + +T R +E+++ +G S +KPVL +A+ +++ + + Sbjct: 61 LPTILAVSIFIAVLTTVTRNYRESEMVVWFASGLSLADWLKPVLRVAVPVALAVAGLTLV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P I + + + S + F + S+ T + + Sbjct: 121 AAPWAYRQIGEYHERFEQRSDLSKVTAGQFAESSGGSRVFFSEDPVTPTDELGNVFARET 180 Query: 181 TQTHKIYYAQSGS----IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 S + + + ++L +G + P + +I ++ F Y L+ ES Sbjct: 181 GPEWLSVLTASSAHSETLPNGDRFLVLGEGHRYDLKPGTPEIRLVHFNKYGLRLESKAGG 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + +A + + ++ S+ R++ L + L++I Sbjct: 241 DPIAEARAAAER--SSKARTTMQLVEDNTDSSWSQVMWRISLPLAALNLALLAIPLGAVN 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + + + + + I + + ++ ++ + + ++ + Sbjct: 299 PRLGRSGDLLIAGLVGLLYMNLINLSRAWISNGK--LSFGVGVWAIHGAVALLTVFLLMR 356 Query: 357 KY 358 + Sbjct: 357 RL 358 >gi|255034852|ref|YP_003085473.1| permease YjgP/YjgQ family protein [Dyadobacter fermentans DSM 18053] gi|254947608|gb|ACT92308.1| permease YjgP/YjgQ family protein [Dyadobacter fermentans DSM 18053] Length = 498 Score = 76.2 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 39/276 (14%), Positives = 91/276 (32%), Gaps = 8/276 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + IL F+++ +VF+ + ++ I+ S ++ ++ + Sbjct: 1 MKKLDKLILTSFWGPFVITMSVVVFVFLMRIMIFYIDDFVSKDLNVMDYAQLFFFFSLIT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P P + + ++ EL I + G S + + P+ +A+ +S+F F + Sbjct: 61 VPTALPLAMLLSSLMAFGNLGEFFELTAIKSAGISVVRAMAPLFIVAVGISVFSFYFNDR 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P L + ++E +F+ IK+ + N + G+ I Sbjct: 121 VSPWANLKGYSLLYDIKTTKATLKIKEGIFYNDLPGYSIKVDEKLENGKMTGMVIYKHNS 180 Query: 181 T----QTHKIYYAQSGSIDLDRQAII----LNDGEVHRKSPISKDISIMKFKSYTLQTES 232 +I A SG + + L +G + S + S Sbjct: 181 RSYEFGNTEIILADSGRMYSINENRYLVIELYNGTRYTDEQGSASSRPVYISSPAGTQTP 240 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETY 268 ++ + + L + + + Sbjct: 241 YSNFNRQSFRHYRMTESLASFGMKRTDEGQFKYHEF 276 Score = 51.2 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 24/247 (9%), Positives = 68/247 (27%), Gaps = 4/247 (1%) Query: 114 LFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI 173 + + Q +F + ++ + ++ I Sbjct: 221 QGSASSRPVYISSPAGTQTPYSNFNRQSFRHYRMTESLASFGMKRTDEGQFKYHEFMKNI 280 Query: 174 FIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 + Y ++ Q + I I + + Sbjct: 281 SDLTHTADSLRTSYQETKKNLVSGSQQYYSYNYREGTDKTIKPGKWIDSLVTRPVSDSLK 340 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 KA ++ + + + + Y E H + TQ L +I LI A Sbjct: 341 KEILTNTKAASNSMLSYIKSQQDYLQTKLKDASKYELEKHHKYTQALSCLIMFLIG---A 397 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFLL 352 A++++ P+ +S+ ++ + +++ +P+ ++ + + Sbjct: 398 PLGAIIKKGGFGVPVLVSILFFILLYVLTNQGDKWVKEGLVAVPVGAWMANTILFLTGMY 457 Query: 353 MIKKKYT 359 I + + Sbjct: 458 FIDRARS 464 >gi|121595375|ref|YP_987271.1| permease [Acidovorax sp. JS42] gi|120607455|gb|ABM43195.1| permease YjgP/YjgQ family protein [Acidovorax sp. JS42] Length = 396 Score = 76.2 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 55/361 (15%), Positives = 125/361 (34%), Gaps = 17/361 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y +R L + ++ + ++L+ ++ +S+ S+ +L ++ L+P L Sbjct: 8 RLDRYAVRLFAVPLLTALATMLLATMLQRLLRLFDIAASTGASIASVLLLAADLVPHYLG 67 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P F M ++EL + TG S + P LA+ + +F ++ Sbjct: 68 LALPVAFTAAIFMAAARMGDDSELDAMLATGRSIARIAAPYFILALFVCVFNLYLFGRLQ 127 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P R + +EEN F + + ++ R Sbjct: 128 PLARYDYHVKMDAVLQTNWDAKIEENRFIDIAHGFSFSADRVEDGGRRFIGVFMERRQNG 187 Query: 183 THKIYYAQSGSIDLD----RQAIILNDGEVHRKSPISKDISIMKFKSY--TLQTESANSS 236 +I A G ++ + + + L DG R++P + Y A Sbjct: 188 IEEITTAVRGQLESNPDTRKMRLKLEDGLRVRQTPDGAIATTRFVDGYVEDFSKTRAPYR 247 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 A ++ L L + +EFH RL + L P++ ++A Sbjct: 248 DRGETATERTLPELWLAMCKTCDPDS------AAEFHSRLARALLPLLLP---LLALPLG 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF-LFCISSIFLLMIK 355 ++ ++ + + S++ + + ++ L ++ F + ++ L I Sbjct: 299 MASKRGRRTPGVVFA-SLALLLLNHTLQFGKSLAESGRLPAALAVWTPFLLFALLSLWIF 357 Query: 356 K 356 + Sbjct: 358 R 358 >gi|87306338|ref|ZP_01088485.1| hypothetical protein DSM3645_08402 [Blastopirellula marina DSM 3645] gi|87290517|gb|EAQ82404.1| hypothetical protein DSM3645_08402 [Blastopirellula marina DSM 3645] Length = 379 Score = 76.2 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 51/377 (13%), Positives = 107/377 (28%), Gaps = 30/377 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTE-----SLNILLKISGY 55 M + Y+L +SFL+ + + VI ++ E + IL Sbjct: 1 MYIIDRYLLTQFIKSFLIFFISFTGLYVVIDSFNNLDEFLRYGEQTGRGAFPILFDYYTP 60 Query: 56 LIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLF 115 I T M + +T + R+ E+ + G ++ +++PV+ L++I Sbjct: 61 RIFTFFNMTGGILTLIAAMFTVTWLQRHNEMTALMAAGITKERIVRPVIIAVGLIAILGA 120 Query: 116 ISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI 175 ++ + P+ + + + L + L+ D + + N F Sbjct: 121 LNREFVVPEYSDALSRNAQDW-LGESAKQLQPKYDNLTDVLISGNHTFANELRIEAPKFR 179 Query: 176 VDSRDTQTHKIYYAQSGSIDLDR---------------------QAIILNDGEVHRKSPI 214 + A + ++ DG V P Sbjct: 180 LPRSQPGVGTKINAVNAFFKPAEADRPSGYLLDEVTEPENLAEIPSLTDRDGSVFVLMPQ 239 Query: 215 SKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHK 274 + + + + L++ N R E H Sbjct: 240 DNAWLAPNQCFVVSELTFEQLTASREWRSSASTWALISALRNRSLDFG---ADVRVEIHS 296 Query: 275 RLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY 334 RLTQ + L+ + K + + + FGV + +P Sbjct: 297 RLTQPFLDMTLLLLGLPLVLKNDNRNVFVAVGLCGAVVVLFFGVTMASRGLGANYMVSPA 356 Query: 335 YIPILYLFLFCISSIFL 351 + L LF + ++ Sbjct: 357 FAAWFPLMLFVPFATYM 373 >gi|163856081|ref|YP_001630380.1| hypothetical protein Bpet1772 [Bordetella petrii DSM 12804] gi|163259809|emb|CAP42110.1| putative membrane protein [Bordetella petrii] Length = 397 Score = 76.2 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 49/360 (13%), Positives = 126/360 (35%), Gaps = 8/360 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ ++ I + +V + + +++ + + T +++L ++ + T Sbjct: 31 MSLFKRSVVAEITSHAGVVFSTLVVVWLSVLLVRLLGEAAGGTIGADVVLGLAAFSTITA 90 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP V + +T R +E+++ +G S ++PVL +AI ++ + + + Sbjct: 91 LPTVLAVSLFIAVLTTVTRNYRESEMVVWFASGLSLADWLRPVLRVAIPVAGLVAVLTLV 150 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIKISKYNPNNTLQGIFIVDSR 179 P I + + + S + F + + + G Sbjct: 151 ASPWAYRQIAEYRERFEQRSDLSKVTAGQFAESGEGQRVFFAEEPTQASDELGNVFARET 210 Query: 180 DTQTHKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + H + A S I + ++L G + P + +I ++ F Y ++ ES + Sbjct: 211 GPEWHSVMTASSARIETEPNGDRFLVLGRGHRYDLKPGTPEIRLVDFAKYGVRLESKSGD 270 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 I S P + S+ R++ L + L++I Sbjct: 271 PIAEARAAAERSSKARPTMQLVADDTDSS---WSQIMWRVSMPLAALNLALLAIPLGAVN 327 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + + + + + + S + P+ I + + ++ L++++ Sbjct: 328 PRLGRSGDLLIAGL-VGLLYMNVINLSRAWISSGKLPFGIGVWAVHAVVLALAGYLLMRR 386 >gi|86133416|ref|ZP_01051998.1| predicted permease YjgP/YjgQ family [Polaribacter sp. MED152] gi|85820279|gb|EAQ41426.1| predicted permease YjgP/YjgQ family [Polaribacter sp. MED152] Length = 483 Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 85/251 (33%), Gaps = 16/251 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL+ F+ + L ++F+ + + Q ++ S+ +LK Y + Sbjct: 1 MKILDKYILKSFLVPFIATFLIVLFVLVMQALWQAFENIAGKGISVIFILKFLYYTTLMI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P P + + L ++ N E + G S L++P+ LAI LS F+ N Sbjct: 61 IPQALPIGVLLSSIMALGNLGENYEFAAAKSAGVSLQRLVRPIGILAIALSGLNFLFLNN 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS-- 178 + P + L + L F IK + + Sbjct: 121 VFPYANLKQRNLYLNIKKKKPALALVPGSFNADIPGYQIKFDEKYGEEENLLKKVWIYDL 180 Query: 179 -RDTQTHKIYYAQSGSIDLDR----QAIILNDGEVHR---------KSPISKDISIMKFK 224 + K+ A+SG I + IL +G + S FK Sbjct: 181 TSNRGNQKVITAESGKIVTEEGSRYMTFILYNGNYYEEHVKSARTTIKRKKMAASSATFK 240 Query: 225 SYTLQTESANS 235 Y + ++ Sbjct: 241 EYEFNIDIGDT 251 Score = 44.2 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 15/107 (14%), Positives = 50/107 (46%), Gaps = 4/107 (3%) Query: 251 LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFI 310 +N N ++ + +++ Y +E++ R+ L VI I A +++R+ P+ + Sbjct: 348 INNNLDSIKWNRKMVNFYDTEYYNRVAFSLSCVILFFIG---APLGSIIRKGGFGLPMIL 404 Query: 311 SLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFLLMIKK 356 ++++ F+ ++ + E++ + ++ + + +L+ + Sbjct: 405 AIAVYVLYFFTNTFGKNLAEESSITSILGSWISAILMIPLAILLTNR 451 >gi|191172497|ref|ZP_03034037.1| putative permease, YjgP/YjgQ family [Escherichia coli F11] gi|300993119|ref|ZP_07180205.1| hypothetical protein HMPREF9553_04259 [Escherichia coli MS 200-1] gi|190907165|gb|EDV66764.1| putative permease, YjgP/YjgQ family [Escherichia coli F11] gi|300305134|gb|EFJ59654.1| hypothetical protein HMPREF9553_04259 [Escherichia coli MS 200-1] gi|324011925|gb|EGB81144.1| hypothetical protein HMPREF9533_04083 [Escherichia coli MS 60-1] Length = 356 Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 68/365 (18%), Positives = 145/365 (39%), Gaps = 18/365 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYASVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + I QL ++Q L L F D+ I + +N ++ + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 +I+ A+S + ++ ++L++G + +D + +++ L + + Sbjct: 181 ANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLD-QS 239 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +K ++++ L + +E R ++ L ++ ++A Sbjct: 240 ANVKRKAKSVTEL----------ARSVFPADHAELQWRQSRGLTALLMA---LLAISLSR 286 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIKK 356 L ++ + + + +F+G + IP L+L + L+++ + Sbjct: 287 LKPRQGRFSTLLPLTLLFVAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMGLLMLVAR 346 Query: 357 KYTKI 361 ++ + Sbjct: 347 DFSLL 351 >gi|121601841|ref|YP_988822.1| YjgP/YjgQ permease [Bartonella bacilliformis KC583] gi|120614018|gb|ABM44619.1| putative permease, YjgP/YjgQ family [Bartonella bacilliformis KC583] Length = 363 Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 54/351 (15%), Positives = 109/351 (31%), Gaps = 5/351 (1%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 Y R L +A++I ++ + ++S + L IS IP ++ Sbjct: 5 ILGRYFFIQYLRITCYFLLGAFILAFLIDFIENSSRLTSLPHYTTKGALLISFLRIPLIM 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF +L S+NR EL+I + G S + P F A L + N Sbjct: 65 QQLFPFIALFSAITMLISLNRKFELVIARSIGVSAWQFLMPACFGAFFLGLVAIFLFNPF 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 S +++ A+ + L + + + + + + Sbjct: 125 AAWGYSQAEKIIAEWHSNNVQTSLNNHRIPWFTQHTDLGTTTIGAKSITDEGLSLINAIF 184 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + I + + + + + KF + ++T Sbjct: 185 VQYNEDATIKNWIHAQKATLTNSAWFLTHGTIYKTGHIPEKFAEFWIETNLKPEFLTEYL 244 Query: 242 ANDQNLSFL-LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 A+ SF L + + V LI+ + K + Sbjct: 245 ADPATTSFYKLPKKIAVARSFGYSANKFDMYLQSLIALPALLVAMTLIAATVSLKFTRLE 304 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 Q K + +S I+ V + S ++ Y PI+ ++ I ++FL Sbjct: 305 QSGK---LILSGVIAGFVLYVISVLVRAFGNAGYIPPIIAAWVPVIIALFL 352 >gi|301168568|emb|CBW28158.1| putative transport-related membrane protein [Bacteriovorax marinus SJ] Length = 368 Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 52/371 (14%), Positives = 119/371 (32%), Gaps = 14/371 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M IL+ + F S + + + V I+ + ++ IP Sbjct: 1 MGILRKLILKEWFKFFAGSVIALFLLVSV---ANLISGFLRGNVTATEVMINHFIEIPGY 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P M + + + +EL I G SR I ++F +++++I F+ + Sbjct: 58 LNKIFPVSCLMASLFSINKLKTRSELTAIFAAGYSRKNYIIDLIFASLIVTIVQFMMTSY 117 Query: 121 IEPKCRSTIKQLSAKAQLALT--------FSYLEENLFFRLDDDLYIKISKYNPNNTLQG 172 I P +S + L +++ + S + + DD +I + YN Sbjct: 118 ISPFFKSQRENLISESTHKFSNLKSQGLRSSTIGSGKMWYRSDDYFIAFTNYNQIKKELY 177 Query: 173 IFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 + ++ + ++ I + + + K + Sbjct: 178 NVTLYKLSADSYLEEIQAMQKVYWEKGIWIGKNVIKLDGLNLKSFPKAEENKENIINLYE 237 Query: 233 ANSSTIVLKANDQNLSFL-LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 ++A+ L+ + L + + Y F+ + + +IF +++ V Sbjct: 238 TPEELRQIEADITILNIVKLWKYIDQLKTSGININEYMVLFYDKFANSIICIIFAILASV 297 Query: 292 AADKR--ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 + K I +F + + V+ + + + P F I I Sbjct: 298 SVFNPNRRSSSFGKNIAAVFFFTILYWLVYSYLIELGNNSKVPPIAATFTVPIAFTIILI 357 Query: 350 FLLMIKKKYTK 360 + +K K Sbjct: 358 VIFSRNRKLAK 368 >gi|134095577|ref|YP_001100652.1| hypothetical protein HEAR2400 [Herminiimonas arsenicoxydans] gi|133739480|emb|CAL62531.1| putative permease [Herminiimonas arsenicoxydans] Length = 347 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 42/315 (13%), Positives = 103/315 (32%), Gaps = 16/315 (5%) Query: 32 ILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDN 91 +++ + + + ++ + G+ LP++ M V+T +++E+++ Sbjct: 2 LIRILGQAAGGKVASADVVALIGFSALNYLPIILNLAGFMSVLLVVTRSYQDSEMVVWFA 61 Query: 92 TGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFF 151 +G S I PVL A+ + + + + P + + + F Sbjct: 62 SGLSLARWIPPVLVFALPIVVMTTLLSLFLTPWSNQQSAIYKERYANREDIARVSPGKFQ 121 Query: 152 RLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSG----SIDLDRQAIILNDGE 207 + + ++ + I S + ++++ G Sbjct: 122 ESSSSDRVFFVEGVAGDSSKVRNIFVSSVRNGKTSVVVAKEGTVEIDPAGDKFLVMHQGR 181 Query: 208 VHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLET 267 + P D +M+F Y + S + + + + + L N NN N Sbjct: 182 RYDGVPTQSDFQLMEFDRYGVLVASQSQALVGDTSARALTTQELLRNRNNFNDG------ 235 Query: 268 YRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH 327 E R++ L V+ L++I + + + + I+L + SY Sbjct: 236 ---ELLWRVSLPLMGVLLMLLAIPLGF---VNPRGGRSANLLIALFLFVFYSNMLSYAQA 289 Query: 328 KIEQNPYYIPILYLF 342 + QN + + Sbjct: 290 IVVQNRAAFMMAWWP 304 >gi|167645643|ref|YP_001683306.1| permease YjgP/YjgQ family protein [Caulobacter sp. K31] gi|167348073|gb|ABZ70808.1| permease YjgP/YjgQ family protein [Caulobacter sp. K31] Length = 409 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 50/363 (13%), Positives = 122/363 (33%), Gaps = 5/363 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + Y+LR + + V + ++L+ ++++S S+ + ++ L+P L Sbjct: 15 RLIDAYLLRLLVWPIVGCLGVTVIALLLERVLRLLDVLSQSSARFGYVTSLAANLVPHYL 74 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P F + V+T ++ +E+ + +G S + P + + + L +F I + Sbjct: 75 GLALPVAFFVALFIVITKLSDGSEIDALLASGQSLTRIAAPFVSVGVFLMVFSLIVFGYM 134 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 +P R + + +A A L F L L+ +FI Sbjct: 135 QPYSRYAYRAVMHEAINAGWNGKLNGGSFIDEPKLLMTADDADAAGQQLKRVFIRRLDVN 194 Query: 182 QTHKIYYAQSGSIDLDRQ----AIILNDGEVHRKSPISKDIS-IMKFKSYTLQTESANSS 236 ++ A + + D ++L +G+ + + + + A + Sbjct: 195 GNEEVITAATADLRADHDAKSVTMLLRNGQRIGVDARGAYRTLMFDQLTTQVPLAGAAAL 254 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 +++ L+ N T +E + RL + LF L++ Sbjct: 255 LRARGGDERELTLGELARQANTPNSVVPRATLLAELYGRLARALFLPFLPLLAFPLGLAA 314 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + + L + + P +F S+++ + + Sbjct: 315 KRGNRTPGLIIAGVLLLAFQHSLQLGQSLAESGKAMPLAAIGTPWLIFTGLSLWMFIGSR 374 Query: 357 KYT 359 K Sbjct: 375 KRP 377 >gi|49475338|ref|YP_033379.1| hypothetical protein BH05440 [Bartonella henselae str. Houston-1] gi|49238144|emb|CAF27352.1| Hypothetical transmembrane protein [Bartonella henselae str. Houston-1] Length = 365 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 44/357 (12%), Positives = 96/357 (26%), Gaps = 15/357 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + Y + I +A +I + +SS + IS IP ++ Sbjct: 5 TLGQYFFIRYLKMTCYFLGGIFVLALLIDFTENSGRLSSLPRYTAKDAFLISVLRIPFIM 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLF------ 115 + PF +L S+NR +EL++ + G S + P F A L +F Sbjct: 65 QQLIPFIALFSAMAMLISLNRKSELVVTRSIGISAWQFLMPACFGAFLFGLFSILLVNPL 124 Query: 116 -ISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF 174 + + + + +L + + I Sbjct: 125 AAWGFSQAERMMTEWRSKNNNVLTSLHNTRILWLTQRTHSGRTTIGAKSITDQGLSLIDA 184 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + + S L A +L DG +++ + Sbjct: 185 TFVQYNDNATIKNWINSRKATLINGAWLLTDGTIYKI---GHPPEKFSELQIQTTLKPEF 241 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + ++ L + + + LI+ V + Sbjct: 242 LTERLVNPATIPFYQLPTKIM-IARSFGYSANNFDMYLQSLIALPALLIAMTLIAAVVSL 300 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + + + + I+ + S ++ Y PI+ + ++FL Sbjct: 301 N---FTRFGQSKILILGGVIAGFSLYVISILVQAFGNAGYIPPIIAAWTPVFIALFL 354 >gi|332297890|ref|YP_004439812.1| permease YjgP/YjgQ family protein [Treponema brennaborense DSM 12168] gi|332180993|gb|AEE16681.1| permease YjgP/YjgQ family protein [Treponema brennaborense DSM 12168] Length = 381 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 54/369 (14%), Positives = 122/369 (33%), Gaps = 19/369 (5%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 LY+++ + F ++ +F + +V QIL V L +LK+ Y +P ++ Sbjct: 17 LILYLVKELLLYFFIAFVFFFMVFFVNQILLMAEDVLKKRVPLADVLKLISYSLPFIIAQ 76 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 PF + L M + E+LI+ G S ++ P L L + +SI F + + P Sbjct: 77 SAPFATLVGFLMCLGRMMSDNEILILRAAGKSFAVILVPALLLGLAISILSFFVNDYLLP 136 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + +L ++ E+ + + + I + IF Sbjct: 137 LGTISYNKLYRSILMSDPSIE-LESNSIKRTESATLVIGDVSGRTVSDLIFFDTDPQGTR 195 Query: 184 HKIYYAQSGSIDLDRQAIILNDGE-------VHRKSPISKDISIMKFKSYTLQTESANSS 236 I + ++ +++ + + D+ + + T S SS Sbjct: 196 RVIVSGTADIVNSQNPDVLMQLDMDNARVLFFDKTEKRNYDMMSAEQTRMNVFTSSLFSS 255 Query: 237 TIVLKANDQNLSFL---LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + + L + L Y E++K+ + + F L+++ A Sbjct: 256 SAYTNPREMTSYDLRTMIRNMKTQQEKSSLQLNMYELEYYKKFSLPFGSLFFALLAMPIA 315 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF-----CISS 348 + I + + ++ +W + ++L Sbjct: 316 ILFGKHNGQTIGLIIGLFICVA---YWAAMILGQTFGIREGLSGFWTMWLPDLCVGAAGC 372 Query: 349 IFLLMIKKK 357 F L++ ++ Sbjct: 373 AFYLVLVRR 381 >gi|294341186|emb|CAZ89587.1| putative permease YjgP/YjgQ [Thiomonas sp. 3As] Length = 377 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 48/332 (14%), Positives = 110/332 (33%), Gaps = 5/332 (1%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 +L + R + R+F + + + + +++ + S S + + G + L Sbjct: 2 LLDLTLRREMSRNFGGAFTVLFTVVITLMLIRILGQASDGQASPQDVFLLIGLTALSYLQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V + T M ++E+ I TG R+ L+ VL + + + + Sbjct: 62 IVITLSLFLAVLLTFTRMWLDSEMTIWRTTGVGRLRLMISVLRFSWPILLLIAALTLFAW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIKISKYNPNNTLQGIFIVDSRDT 181 P L + + S + F I K + + + Sbjct: 122 PWANQQSTALRIRFEQRSDISRVAPGQFRESASGKRVFFIDKGAQAGGVAHDIFIRDDTS 181 Query: 182 QTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + A+S + + ++L++G + +P + +I F S ++ ++ + V Sbjct: 182 GQTVLITARSAQVQRIDGQPFLVLSNGNRYAHTPGQANYTITSFDSLDMRLDATIGLSNV 241 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLE--TYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +++L PN N P + E RL L + L+++ A Sbjct: 242 ADNKTGPVNWLTQPNRNVPTEYLFNPAIPNWLGELSWRLGVPLSAALLALMALPLASGSV 301 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKI 329 + + + I F + I + Sbjct: 302 RTGRAGSLISAILVYLIYFNLLNVLQGWISEG 333 >gi|320335816|ref|YP_004172527.1| permease YjgP/YjgQ family protein [Deinococcus maricopensis DSM 21211] gi|319757105|gb|ADV68862.1| permease YjgP/YjgQ family protein [Deinococcus maricopensis DSM 21211] Length = 371 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 41/342 (11%), Positives = 96/342 (28%), Gaps = 13/342 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K Y+LR + +++ L + + I + ++ S + + +P + Sbjct: 25 LKKLAPYVLREVLPLYVVGALVFLLLTTTDLISGVVGILLSYHPTPRQAWLLYVTQVPRL 84 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + +++EL G + L P+L A L+ F+F + Sbjct: 85 LNQSLILAIPFAVLVGFGRLAKDSELKATAAGGVRPLNLAWPLLLPAALIGAFVFYNGAY 144 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ ++ + + D L+ S+ + Sbjct: 145 LTPQAQAQWNTAWFSVYRQAPPPPVTTTYTYAQDGTLFS-ASRVETPQGATVANLTGVLV 203 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + A +GS D + L G V R +F + + + Sbjct: 204 QTPTETITASTGSWDARAKTWTLPGGWVVRGDA-----RPAEFHTPRTFPQRDEIARPTP 258 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + L L + + TY+ +R + F + Sbjct: 259 PPAESTLPEL-RAELASGRLNVQERRTYQFNIARRYADAFTALGFAFAASALGLMVR--- 314 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 ++ F+ + ++ + P L + Sbjct: 315 ---NRAWAVTNVVFLILGFYIVWSTVPQLAGSGALPPNLAAW 353 >gi|88803032|ref|ZP_01118559.1| putative permease [Polaribacter irgensii 23-P] gi|88781890|gb|EAR13068.1| putative permease [Polaribacter irgensii 23-P] Length = 482 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 51/251 (20%), Positives = 89/251 (35%), Gaps = 16/251 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL+ FL + L ++F+ + + Q ++ S + +LK Y ++ Sbjct: 1 MKILDKYILKTFLGPFLATFLIVLFVLVMQLLWQTFENIAGKGISFSFILKFLYYTSLSI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P P + + L S+ N E ++G S L++P++FL +LLS F+ N Sbjct: 61 VPQAMPIAVLLSSIMALGSLGENYEFAAAKSSGISLQRLVRPLIFLTLLLSGINFLFLNN 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS-- 178 I P + L + L F IK + ++ Sbjct: 121 IFPYAILKQQNLYYNIKKKKPALALIPGSFNSDLPGYQIKFDEKYGEEKNLLKNVLIYDL 180 Query: 179 -RDTQTHKIYYAQSGSIDLDR----QAIILNDGEVHRK---------SPISKDISIMKFK 224 KI A+ G I + IL DG + + S FK Sbjct: 181 SSSKGNQKIITAKRGKIISEEGSRYMTFILYDGYYYEDHTKTTRSYSKKKNMPASQATFK 240 Query: 225 SYTLQTESANS 235 Y + ++ Sbjct: 241 EYEFNIDISDL 251 Score = 42.7 bits (98), Expect = 0.082, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 44/102 (43%), Gaps = 3/102 (2%) Query: 259 NYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGV 318 ++ + L + SE++ R+ +I I A +++R+ P+ ++++I Sbjct: 357 KWKRKTLNFFDSEYYGRIALSFSCLILFFIG---APLGSIIRKGGFGLPMILAIAIYVTY 413 Query: 319 FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 F+G + + E++ + + F + + ++ TK Sbjct: 414 FFGNTMGKNLAEESSISAVLGSWISAMVMIPFGIFLTRRATK 455 >gi|256420369|ref|YP_003121022.1| permease YjgP/YjgQ family protein [Chitinophaga pinensis DSM 2588] gi|256035277|gb|ACU58821.1| permease YjgP/YjgQ family protein [Chitinophaga pinensis DSM 2588] Length = 478 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 32/205 (15%), Positives = 85/205 (41%), Gaps = 1/205 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + +++ F+ + +F+ + + + I+ + +++++ Y + Sbjct: 1 MKKLDKLLIKTFMGPFVATFFVTLFVLVMQFLWKYIDDLVGKGLDTPVIIELITYTSANL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + + ++ + EL+ + ++G S ++P+L + +++I F+ N Sbjct: 61 VSLALPLAVLLSSIMTFGNLGESFELVALKSSGISLTRFMRPLLAVCTMIAILAFLFNNY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSR 179 P K L + ++ +F+ D IK+++ N T+ + I+D Sbjct: 121 AMPVANLRAKSLLYDITNSKPAFNIKAGVFYTDIPDYTIKVAEKEKDNKTIHQVMIIDHT 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILN 204 K+ A+ G++ L L Sbjct: 181 PGGGDKVILAEKGTMLLSADKRFLY 205 Score = 39.2 bits (89), Expect = 0.95, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 33/90 (36%), Gaps = 4/90 (4%) Query: 268 YRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH 327 ++ E+ ++ T ++ LI A +++R+ P+ ++ F Sbjct: 359 HKVEWQRKFTLAFSCIVMFLIG---APLGSIIRKGGLGTPLIFAVVFFVIFNIFFMVGEK 415 Query: 328 KIEQNPYY-IPILYLFLFCISSIFLLMIKK 356 ++ ++L + I + +I K Sbjct: 416 MARKDVMATWSGMWLSNIVLIPIAMFLIYK 445 >gi|313680814|ref|YP_004058553.1| permease yjgp/yjgq family protein [Oceanithermus profundus DSM 14977] gi|313153529|gb|ADR37380.1| permease YjgP/YjgQ family protein [Oceanithermus profundus DSM 14977] Length = 335 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 42/353 (11%), Positives = 104/353 (29%), Gaps = 21/353 (5%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + Y+LR I +L+ L + + + + S + + ++ Y +P L + Sbjct: 2 LQRYLLREILTPYLLGTLLFIGLVTTDLLSSLSGVFLSRGTTWTQVGELVLYRMPYTLGV 61 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P L R++EL + G + + L+ PVL LA ++ +++ ++P Sbjct: 62 ALPLGLVFAVLVALARWIRDSELKAVYAAGIAPVRLLAPVLGLAAFVAAVAWVNAGWVKP 121 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + ++ L + S + N + + P++ G T Sbjct: 122 EAQARYDDLIYEIYYGHAPSGVLTNAAYAPQGLGVYYARRVYPDDAGGGRLQGVRVVTPD 181 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 ++ A G +L + + + +F + Sbjct: 182 GAVWSADEGVW--KDANWVLKNAW------KTAPGARPEFWETIPLPFPSRFVEKKTTYE 233 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 ++ L +P R +R + + ++ V Sbjct: 234 SLPMAELRELAKVDPQA--------RFPLQRRHADAVGVIALAWLAAVVGLSLREA---- 281 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + FG + ++ +L ++ L ++ Sbjct: 282 -AWAFVAVVLLIFGYYVLWTLAAQLARFAVVGPYGAWLADVVYFALALAGTRR 333 >gi|309794091|ref|ZP_07688516.1| conserved hypothetical protein [Escherichia coli MS 145-7] gi|308122498|gb|EFO59760.1| conserved hypothetical protein [Escherichia coli MS 145-7] Length = 356 Score = 75.4 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 67/365 (18%), Positives = 142/365 (38%), Gaps = 18/365 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLLVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + I QL ++Q L L F D+ I + +N ++ + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 +I+ A+S + ++ ++L++G + +D + +++ L + S Sbjct: 181 ANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQSP 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 V + + P + +E R ++ L ++ ++A Sbjct: 241 NVKRKAKSVTELARSAFPAD-----------HAELQWRQSRGLTALLMA---LLAISLSR 286 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIKK 356 + ++ + + + +F+G + IP L+L + L+++ + Sbjct: 287 VKPRQGRFSTLLPLTLLFIAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMGLLMLVAR 346 Query: 357 KYTKI 361 ++ + Sbjct: 347 DFSLL 351 >gi|325279047|ref|YP_004251589.1| permease YjgP/YjgQ family protein [Odoribacter splanchnicus DSM 20712] gi|324310856|gb|ADY31409.1| permease YjgP/YjgQ family protein [Odoribacter splanchnicus DSM 20712] Length = 487 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 42/239 (17%), Positives = 91/239 (38%), Gaps = 6/239 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK +++L+ F+ + +F+ + + + I+ + ++ ++ Y+ T+ Sbjct: 1 MKKLHIFMLKSFIGPFVATFFISMFVLIMQFLWRMIDEIVGKGLEFTVIAELLIYVATTL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +PM P + + S+ N EL+ + + G S ++KP++ L I L++F F+ N Sbjct: 61 VPMALPLAVLLSSIMTFGSLGENYELIALKSAGISLYRIMKPLIILIICLTVFAFVFSNN 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF-IVDSR 179 I P L + +E +F + IKI K N + I + + Sbjct: 121 ILPVANLKFYSLLYDIRKQKPEMSFKEGIFTNDLEGYSIKIDKINKETGMMYNMLIYEHK 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAI-----ILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 D + + + +L +G + + S F L+ + Sbjct: 181 DGSGNYDVTKADSGMMISDAKSNLMELVLYNGHSYTDEGMKNPSSRKTFPFRRLKFDKE 239 Score = 46.5 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 18/131 (13%), Positives = 50/131 (38%), Gaps = 6/131 (4%) Query: 228 LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGL 287 E + + + + + + E + + E+H++ T IF Sbjct: 329 FDIEEQRRAVDNALQYAREVKQRNQDDLHYYVAQQENVIKSQLEWHRKFTLSFACFIFFF 388 Query: 288 ISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI--LYLFLFC 345 I A A++R+ P+ +S+ + F +++ S + + + P +++ F Sbjct: 389 IG---APLGAIIRKGGLGMPVVVSVLL-FIIYYIISMMGERSAREAVISPAAGMWISAFI 444 Query: 346 ISSIFLLMIKK 356 + + +++ K Sbjct: 445 LLPLGIILTYK 455 >gi|221211523|ref|ZP_03584502.1| putative membrane protein [Burkholderia multivorans CGD1] gi|221168884|gb|EEE01352.1| putative membrane protein [Burkholderia multivorans CGD1] Length = 326 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 36/322 (11%), Positives = 92/322 (28%), Gaps = 25/322 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +E Y R I +F+ + + ++ +N V + P+ Sbjct: 1 MRLYEKYFARQIYVTFIFILFAFSGLFFFFDLISELNSVGHGNYKFGYAVLRVALQTPSR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V M N+E I +G + ++ +L + + L I ++ Sbjct: 61 FYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLLKIGVPLVIVTYLIGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLF---------FRLDDDLYIKISKYNPNNTLQ 171 + P +++ +A A S + ++ ++ + P++T+ Sbjct: 121 VGPYADQLSERVRLQALGASVSSNFQSGVWVKDTLAARENGEQVTRFVNVGSLAPDSTIS 180 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPIS---------------K 216 + I + K +L +PI Sbjct: 181 NVRIYEFDAKFQLKNVRIAQTGRYEPPGHWLLKGVTETELTPIQPIAGQAPDALNPVYRS 240 Query: 217 DISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRL 276 + S +++ ++ L + + + Y ++L Sbjct: 241 QQVSLPEYRLRSDLTPQILSVLLVSPERMSIINLFR-YIQHLRENHQDTQRYDIALWRKL 299 Query: 277 TQWLFPVIFGLISIVAADKRAL 298 + ++S+ A Sbjct: 300 LYPFAVFVMLVLSLPFAYLHTR 321 >gi|242240955|ref|YP_002989136.1| permease YjgP/YjgQ family protein [Dickeya dadantii Ech703] gi|242133012|gb|ACS87314.1| permease YjgP/YjgQ family protein [Dickeya dadantii Ech703] Length = 366 Score = 75.0 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 51/354 (14%), Positives = 129/354 (36%), Gaps = 19/354 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETFKSQVAILFILLLIFFCQKLVRILGAAVDGEIPTNLVLSLLGLGVPQMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ G + L+K L LA+L + ++ + Sbjct: 62 LILPLSLFLGLLMTYGKLYAESEITVMHACGLGKSVLLKASLLLAVLTVLLAMVNVLWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV--DSRD 180 P ++ A+A+ + + E F + D + + IF+ R+ Sbjct: 122 PWSSRHQDEVLAEARANPGVASMVEGQFQQTQDGNSVLFVGNVSGQDFERIFMAQLHPRE 181 Query: 181 TQTHKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A G I + Q + LN G + + + +D I F +Y + + Sbjct: 182 NTRPSVVVADRGHIVARNDGAQIVTLNKGVRYEGTAMLRDFRITDFVNYQAVMGHQDVAI 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 ++ L + R+EFH RLT L +I ++ Sbjct: 242 DPTNVEQMDMKTLWS----------SPDIAARAEFHWRLTLVLSVLIMAVM---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + ++ ++ + ++ + F S + + P+++++L + + Sbjct: 289 INPRQGRVLSMLPAMLLYLVFFLLQSSLRSNASK-GKLDPLMWMWLTNLVYFGI 341 >gi|45658408|ref|YP_002494.1| hypothetical protein LIC12569 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45601651|gb|AAS71131.1| conserved hypothetical protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 631 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 61/191 (31%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + YILR I FL+S F + V+ + + I L LL GYL+ LP Sbjct: 131 ILDRYILREIFSPFLVSLAFFTMVYMVLALQKMIGLFVGKGVDPFRLLDYFGYLLANTLP 190 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M P M ++ ++E+ I + G S + L ++++ + + Sbjct: 191 MTIPMACLMSGIMAAGRLSGDSEITAIRSAGVSFPRIYINFLAFGFVMALLVGYLNFYLS 250 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P+ + + + + F + + + Q Sbjct: 251 PENTRKMNEFNKWILAYNPLLAITPGQFSGDKTQDLFEKRARTMYTEGMNSNTGELKGVQ 310 Query: 183 THKIYYAQSGS 193 + G+ Sbjct: 311 IREWEIFLEGN 321 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 36/98 (36%), Gaps = 1/98 (1%) Query: 259 NYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGV 318 ++L + E H+R+ + +IF IS + + L I F Sbjct: 491 QQGKKVLTDFNVEIHRRIAMPISCLIFFFISFPLGLVVKRSGKGMSFTLAVVFLMIYFTF 550 Query: 319 FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 F S I + + + P L + SI + MIK+ Sbjct: 551 FTLGSTISYNDKIPDWIGPWSANILIALLSINI-MIKR 587 >gi|198283963|ref|YP_002220284.1| permease YjgP/YjgQ family protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|198248484|gb|ACH84077.1| permease YjgP/YjgQ family protein [Acidithiobacillus ferrooxidans ATCC 53993] Length = 368 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 62/355 (17%), Positives = 131/355 (36%), Gaps = 11/355 (3%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 ++R + SFL++ L ++ I + Q+ Q + V+S L+I+L++ G +PT+L MV P Sbjct: 3 VVRNLTISFLLTSLVVLAILAIGQLTQLLRQVASGQLPLSIILRLLGLALPTLLVMVLPL 62 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 F V +++ R+ E++ I +TGT L+ PV +A + I P + Sbjct: 63 AFFFAVYLVFSNLYRSNEMVAIRSTGTGLSGLLPPVAVVAACVFCLELILSLSWAPGAQR 122 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 ++ S + A + L+ F L I + + N+ + I S Sbjct: 123 ELQSESVRLANAAAEAMLQPGSFTNLPGGRVIYVGQAVGKNSHRFQEIFLSVAQGGQLDM 182 Query: 188 ----YAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 Y + ++L DG+ + P ++ F Y + ++ ++ Sbjct: 183 ATAAYGEVKPAQDGALTLVLVDGQRYLGQPGKAGFKVLSFARYRVLLDNQDTGGAEPGGI 242 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 + + + L + SE RL L + + + R Sbjct: 243 NWSSASLPQLVR---QLHGTGMRFAVSELEWRLLWPLALPLLA--LLAIPLAYSEPRGGG 297 Query: 304 KIHPIFISLSISFGVFWGFSYIIH--KIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + + + V Y+ P + +L++ L ++ ++ Sbjct: 298 RAAGMLVGILFLLAVNNIVVYVKEHMMNGSMPIFPGLLWVLLLILAVAAYAFFRR 352 >gi|83945295|ref|ZP_00957644.1| hypothetical protein OA2633_00970 [Oceanicaulis alexandrii HTCC2633] gi|83851465|gb|EAP89321.1| hypothetical protein OA2633_00970 [Oceanicaulis alexandrii HTCC2633] Length = 367 Score = 75.0 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 40/363 (11%), Positives = 91/363 (25%), Gaps = 20/363 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTVL 61 Y+ + + + I + +I ++ + + S L +S P ++ Sbjct: 4 RLWRYLFIQTLIGLIGAAVIITAVILLIDFVETSRDIGTRVGISAFQALHLSLLKAPLLV 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PF +NR +EL+++ +G S ++ PV LA L ++ N + Sbjct: 64 QDTLPFIVLFGVLFTFFRLNRRSELIVMRASGYSAWRILAPVAILAALTGAISTLALNPL 123 Query: 122 EPKCRSTIKQLSA------------KAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT 169 + + + + + Sbjct: 124 GAASNARFEATREALFEGEGQSSGANQSGPIWLRETTATGYIMITAQQQGGDDATLTEPV 183 Query: 170 LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ 229 + + +S + A+ + + L + + + + + Sbjct: 184 FRQYVLSESGAPLLDRRITAERAEL--NGGFWSLTNAIEY---APGGQATELGDVALPTN 238 Query: 230 TESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 + L + Y +H L Q L V L+ Sbjct: 239 VGRQALFERARSPGAVSFWQL-PAVIASARDAGLSSLAYELRWHGLLAQPLMLVAAALMG 297 Query: 290 IVAAD-KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 I A L + I + + P LF ++ Sbjct: 298 IAATLRLHRLGGAAGFAAAGATAGFILYFSQELMLGLGASGAITPLTAAWTTPALFSLAG 357 Query: 349 IFL 351 +F Sbjct: 358 LFF 360 >gi|15639868|ref|NP_219318.1| hypothetical protein TP0883 [Treponema pallidum subsp. pallidum str. Nichols] gi|189026106|ref|YP_001933878.1| hypothetical protein TPASS_0883 [Treponema pallidum subsp. pallidum SS14] gi|3323200|gb|AAC26573.1| conserved hypothetical integral membrane protein [Treponema pallidum subsp. pallidum str. Nichols] gi|189018681|gb|ACD71299.1| hypothetical integral membrane protein [Treponema pallidum subsp. pallidum SS14] Length = 365 Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 47/344 (13%), Positives = 111/344 (32%), Gaps = 7/344 (2%) Query: 12 IGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAM 71 F + + I I IL + S+ + L+KI IP + + P Sbjct: 5 FLPIFFLVLVCASMILDAIDILVNLTQFISNGYRFSSLVKIWYVSIPHYVLLCCPLSVLF 64 Query: 72 ETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQ 131 T + + E L I G S +++ P L+I +F +N + +S + Sbjct: 65 AATYTVRILYVQNEFLAIHFGGLSFFSIVGPWFGFMCFLAIGIFAFDNSVVVVSQSKKDE 124 Query: 132 LSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQS 191 + A+ + + + D + Y+ + +V +++ ++ Sbjct: 125 IIARTVSYAQGNSENDVVASSFDGKIISIAGAYHRGQKVLVDMLVIMKNSNGTIQKLIEA 184 Query: 192 GSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLL 251 + + +L V+ + K + S+ L+ ++ + Sbjct: 185 HTAHWQKDRWVLIKPVVYTITHEMKLMVSEYLDSFELREPLELFDHQDFLTKGMSI-QKI 243 Query: 252 NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFIS 311 + Y + F+K+ L I +S + +++R I IF S Sbjct: 244 KETLHTLKYASKPHRELSIRFYKKFYFPLTMCIMLCLSF---LTGSFLKKRSLIMYIFCS 300 Query: 312 LSISFGVFWGFSYIIHKIEQ---NPYYIPILYLFLFCISSIFLL 352 + ++ + I + +P++ + F ++ Sbjct: 301 VVLASAYYVVEMTSIVCAREEYFSPFWGVFFPVLTFLFLIFYVW 344 >gi|149280024|ref|ZP_01886149.1| hypothetical protein PBAL39_24078 [Pedobacter sp. BAL39] gi|149229221|gb|EDM34615.1| hypothetical protein PBAL39_24078 [Pedobacter sp. BAL39] Length = 472 Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 39/240 (16%), Positives = 92/240 (38%), Gaps = 4/240 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + +L+ R F ++ ++FI + + + ++ + ++L++ Y Sbjct: 1 MKKIHVLLLKAFIRPFFVTFFIVMFILLMFFLFKYVDDLIGKGFEWYVILELMYYASAAN 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + ++ N EL+ I + G S + P+L L +SI F + Sbjct: 61 VSMALPLSILLSSIMTFGTLGENYELVAIKSAGISLQKAMMPLLVLITCISISSFFFSDY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + PK L + ++E +F + I++ K + ++ Sbjct: 121 MLPKANLKFGSLLWDIRNKKLSFLIKEGVFNSSIPNYSIRVDKKGADGVTLHNVMIYDHT 180 Query: 181 TQT--HKIYYAQSGSIDLDRQAII--LNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + KI A+ G + D + ++ L DG + +S + + ++ + + Sbjct: 181 SNNGIAKIIIAKEGKMASDDKYLLLKLKDGVRYEESSGKNASYNPRQELTRMRFKETDQK 240 Score = 43.8 bits (101), Expect = 0.046, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 35/92 (38%), Gaps = 4/92 (4%) Query: 257 NPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISF 316 + R + + + E+ K+ T ++ I A A++R+ P+ +++ F Sbjct: 350 DFEERTKNIIKVQIEYQKKFTLAFSCLLLFFIG---APLGAIIRKGGLGLPVVMAVVF-F 405 Query: 317 GVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 ++ S + K +P +L I Sbjct: 406 LIYHVISTVAEKSALTGTLLPFFGPWLAIIVL 437 >gi|148244955|ref|YP_001219649.1| permease [Candidatus Vesicomyosocius okutanii HA] gi|146326782|dbj|BAF61925.1| permease [Candidatus Vesicomyosocius okutanii HA] Length = 360 Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 48/339 (14%), Positives = 119/339 (35%), Gaps = 1/339 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK LYI++ + L+ L + + L + + ++ K IP V Sbjct: 1 MKILTLYIVKTMAFYTLIVMLVWIGVYSFFNFLDEVKFIGQYNYTVFEATKYIILNIPAV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + + + LT++ ++L+II ++G S + + V+++A++ + + + Sbjct: 61 MYSHSSVIILLGSLLALTNLASTSQLVIIRSSGVSIMQISNIVVWVALMFIAIIILIGEL 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + L +KA ++ + + + ++ + FI Sbjct: 121 VAPITTEYAECLRSKALEQNMTCRNQQEFWLKDNGLFIHVKKDFDAKSFQDITFIKLRAP 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 I Y+ + + + + + K+ S F+ Y++Q L Sbjct: 181 GVLDSIIYSDNATFNGNNLELNKPIHYQLSKNGELTTFSKNYFEKYSVQISFNQKLIKNL 240 Query: 241 KANDQNLSFL-LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 K + + LS L + + + E +KR + V L S++ Sbjct: 241 KKDPRKLSTWHLYKQMSFLTNNNLVADIVEIEIYKRFMMPVTLVAMILFSMLFVFGSLRD 300 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 K + + +S+ F + ++ +++ Sbjct: 301 ASLGKKIFLGLMMSLFFELASRIIGVLSLTFNYNHFLSA 339 >gi|24213806|ref|NP_711287.1| hypothetical protein LA_1106 [Leptospira interrogans serovar Lai str. 56601] gi|24194638|gb|AAN48305.1| hypothetical protein LA_1106 [Leptospira interrogans serovar Lai str. 56601] Length = 631 Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 61/191 (31%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + YILR I FL+S F + V+ + + I L LL GYL+ LP Sbjct: 131 ILDRYILREIFSPFLVSLAFFTMVYMVLALQKMIGLFVGKGVDPFRLLDYFGYLLANTLP 190 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M P M ++ ++E+ I + G S + L ++++ + + Sbjct: 191 MTIPMACLMSGIMAAGRLSGDSEITAIRSAGVSFPRIYINFLAFGFVMALLVGYLNFYLS 250 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P+ + + + + F + + + Q Sbjct: 251 PENTRKMNEFNKWILAYNPLLAITPGQFSGDKTQDLFEKRARTMYTEGMNSNTGELKGVQ 310 Query: 183 THKIYYAQSGS 193 + G+ Sbjct: 311 IREWEIFLEGN 321 Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 36/98 (36%), Gaps = 1/98 (1%) Query: 259 NYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGV 318 ++L + E H+R+ + +IF IS + + L I F Sbjct: 491 QQGKKVLTDFNVEIHRRIAMPISCLIFFFISFPLGLVVKRSGKGMSFTLAVVFLMIYFTF 550 Query: 319 FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 F S I + + + P L + SI + MIK+ Sbjct: 551 FTLGSTISYNDKIPDWIGPWSANILIALLSINI-MIKR 587 >gi|121730751|ref|ZP_01682851.1| conserved hypothetical protein [Vibrio cholerae V52] gi|121627676|gb|EAX60335.1| conserved hypothetical protein [Vibrio cholerae V52] Length = 289 Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 31/290 (10%), Positives = 93/290 (32%), Gaps = 2/290 (0%) Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + L ++ ++EL+++ G S++ + VL AI L I + + P+ + Sbjct: 1 MAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIIVTLLGEWGAPQAQ 60 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 + + + + D + +I I+K + + + Sbjct: 61 -KMARDMRAFATSGGAIMSVRTGVWARDANDFIFIAKVENEQLYGLNLWRFDENKKLSTV 119 Query: 187 YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 +++ + + ++ + + I + + + + +K + + Sbjct: 120 IFSEQVDYVANNEWLMKDAVLTRLVNDIEISKESLPEYRWRTSLAPDKLAVVTVKPEELS 179 Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 L+ L + + + Y +++TQ + + L+++ Sbjct: 180 LTGL-SDYVHYLKASEQDSSRYELALWRKVTQPISIAVMMLMALSFIFGPLRSVTMGARI 238 Query: 307 PIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + +F + F + + P L L ++ L+ +K Sbjct: 239 LSGVIAGFTFYISSEFFGPLSLVYGLPPLFGALAPSLVFLAIALGLLGRK 288 >gi|148560142|ref|YP_001258668.1| hypothetical protein BOV_0678 [Brucella ovis ATCC 25840] gi|148371399|gb|ABQ61378.1| conserved hypothetical protein [Brucella ovis ATCC 25840] Length = 362 Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 43/354 (12%), Positives = 102/354 (28%), Gaps = 12/354 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + Y + L L I +A ++ + + +++ ++ L +S +P ++ Sbjct: 5 TLGRYFFTRYVQITLYFLLGIFALALLLDFTENASRLANLPAYTVWAALGLSAMRVPFIM 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF L S+NR EL++ + G S + P F A+L + N + Sbjct: 65 QQMIPFVALFSAMATLISLNRKYELVVARSVGVSAWQFLLPACFGALLFGLATIFILNPL 124 Query: 122 EPKCRSTIK----QLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD 177 S + ++ + + I T Sbjct: 125 AAHGFSKAEEIAAMWKTGKVTDVSALRDPWLRQKTDEGETIIGAKSILNQGTTLADATFI 184 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 D Q + + + L L D ++ ++ + Q Sbjct: 185 QFDEQKNIKDRYDARTATLQDGYWELTDVMRF---ARGQEPQKLETFRISTQLRPEYVEE 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + L + + ++ L + LI+ + Sbjct: 242 KLASPETIPFTQLRHK-IEVARSFGYSANAFDMQYQSLLALPALLMAITLIAATVSL--K 298 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 VR + I + F ++ S ++ + P + ++ + + F Sbjct: 299 FVRFGQSGAMILGGVIAGFVLYVV-SVLVKAFGDAGFVPPFVAAWVPVVIATFF 351 >gi|110807999|ref|YP_691519.1| hypothetical protein SFV_4232 [Shigella flexneri 5 str. 8401] gi|110617547|gb|ABF06214.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401] Length = 345 Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 44/341 (12%), Positives = 124/341 (36%), Gaps = 19/341 (5%) Query: 23 IVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNR 82 ++ I + ++++ + N++L + G +P + ++ P + L + Sbjct: 1 MLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYT 60 Query: 83 NTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTF 142 +E+ ++ G S+ L+K + LA+ +I ++ P ++ A+A+ Sbjct: 61 ESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGM 120 Query: 143 SYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT--HKIYYAQSGS---IDLD 197 + L + F + + + + + + +F+ R + A SG + Sbjct: 121 AALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDG 180 Query: 198 RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNN 257 Q + LN G + + +D I F+ Y + + ++ L N + + Sbjct: 181 SQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVALDPNDTDQMDMRTLWNTDTD- 239 Query: 258 PNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFG 317 R+E + R+T + L+ + ++ ++ + ++ + Sbjct: 240 ---------RARAELNWRITLVFTVFMMALM---VVPLSVVNPRQGRVLSMLPAMLLYLL 287 Query: 318 VFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 F + + + P L+++ + + L ++ + Sbjct: 288 FFLIQTSLKSNGGK-GKLDPTLWMWTVNLIYLALAIVLNLW 327 >gi|268315816|ref|YP_003289535.1| permease YjgP/YjgQ family protein [Rhodothermus marinus DSM 4252] gi|262333350|gb|ACY47147.1| permease YjgP/YjgQ family protein [Rhodothermus marinus DSM 4252] Length = 481 Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 45/283 (15%), Positives = 96/283 (33%), Gaps = 13/283 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK L + FL ++F+ + +++ + + L ++L++ Y + + Sbjct: 1 MKRLHRMTLGMLPGPFLGWFGTLMFLLIMQFLIKYLPDLVGKGLPLGVILELISYNLAYM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + + + +I + G S L P+L + ++L+ + N+ Sbjct: 61 VVLAVPMATLIAMIMTFGRLAESNAYQVIKSAGISLPQLTWPLLIVGLVLTGAMMYFNNL 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTL-QGIFIVDSR 179 I P+ + L Q L+ +F+ + I + +P + + I D R Sbjct: 121 ILPEANHRARNLWIDIQRKKPGFQLQPGVFYDGIEGYSILVQHRDPETDSLRDVTIYDYR 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAI----ILNDGEVHRKS--PISKDISIMKFKSYTLQT--- 230 ++ H + AQ G + IL DGE HR + + F Y L+ Sbjct: 181 NSGEHAVLKAQRGLLQPIAGGRFIDLILEDGEFHRLRRLEGQERYERLAFARYRLRLDLS 240 Query: 231 ---ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRS 270 + + +L + R Sbjct: 241 DFVFTRSQEEGYRTDRTTPTPQMLALVDSMAAEVQRNRARIRQ 283 Score = 50.4 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 17/114 (14%), Positives = 37/114 (32%), Gaps = 6/114 (5%) Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + L + + + + YR E HK+ + + +IF LI + +R Sbjct: 338 QTRRLQTEIEDLQRSIQWTERRADRYRVEIHKKFSIAVACLIFVLIGMPLGL----SVRR 393 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI--LYLFLFCISSIFLLMI 354 + F +W K+ Y P ++L + + + + Sbjct: 394 GGLGLAGGLALAIFLFYWITLVQGEKLADRGYLTPWIGMWLPNLVMGLLGVALF 447 >gi|327396302|dbj|BAK13724.1| inner membrane protein YjgP [Pantoea ananatis AJ13355] Length = 308 Score = 74.3 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 42/304 (13%), Positives = 109/304 (35%), Gaps = 19/304 (6%) Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + ++ P + L + +E+ ++ G S+ L+K + L + S+ ++ Sbjct: 1 MAQLILPLSLFLAILMTLGRLYTESEITVMHACGLSKAVLVKAAMVLMLFTSVVAAVNVI 60 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P +Q++ A+ + L F D + + N +F+ R Sbjct: 61 WLGPWSSRYQEQVTQNAKANPGAAALAAGQFQTSSDGSAVLFLENVKGNQFGHVFLAQLR 120 Query: 180 DTQT--HKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + A SG ++ + Q + L+ G + + +D I F +Y Sbjct: 121 PKGNARPSVVLADSGHMEQKKDGSQIVTLDKGTRFEGTALLRDFRITDFTNYQAYVGYKQ 180 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 ++ + + LL+ +R+E H R+T ++ L+ Sbjct: 181 ATLDPNDVDQATFATLLS----------NKTPEFRAELHWRITLVFAVLVMALM---VVP 227 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + ++ ++ + ++ + F S + + P +++++ IS + L ++ Sbjct: 228 LSVVNPRQGRVLSMLPAMLLYLIFFLLQSSLRSSGAK-GRLDPAIWMWVVNISYLALAIV 286 Query: 355 KKKY 358 + Sbjct: 287 LNLW 290 >gi|120611822|ref|YP_971500.1| permease [Acidovorax citrulli AAC00-1] gi|120590286|gb|ABM33726.1| permease YjgP/YjgQ family protein [Acidovorax citrulli AAC00-1] Length = 365 Score = 74.3 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 44/334 (13%), Positives = 119/334 (35%), Gaps = 17/334 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ I + + RSF + + +V + + +++ + S + + + ++ + G+ + LP Sbjct: 2 LFDSSIRKELARSFGATLVVLVTVVMTMMLIRTLGQASRGSVNPSDVMLVMGFTVLGQLP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + + L M R +E++I +G + L+ P+L A + + + +I Sbjct: 62 TILTLSLFVAVVGTLARMYRESEMVIWFASGRGMLHLLPPLLRFAWPVILAIATLALLIW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P I+QL + + + F + + + Q + + + Sbjct: 122 PWANQQIQQLKVQYEQRSDVDRIAPGEFQESANGARVFFIDRETPDNQQATNVFIASNEH 181 Query: 183 THKIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + +++ +L+DG+ S + + +F Y + A SS+ Sbjct: 182 GRETVTSARSARLETRGNQRMALLSDGQRLETSLDKPGLKVSEFSEYGTRIGGAASSSSD 241 Query: 240 LKA-NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 A ++ + L +R+E R + F ++ + A + Sbjct: 242 DGAVKTRSTAQLF----------ASSDPVFRAELGWRFGLAFAALNFVVLGLAVA---SA 288 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN 332 + + + +L + ++ + + Sbjct: 289 NPRAARSTSLVFALFAFVVYYNLMTFGQNWVGAG 322 >gi|300312408|ref|YP_003776500.1| permease [Herbaspirillum seropedicae SmR1] gi|300075193|gb|ADJ64592.1| permease transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 376 Score = 74.3 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 37/341 (10%), Positives = 108/341 (31%), Gaps = 14/341 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ + R + + + I + +++ + + + ++ + G+ +P Sbjct: 2 IFQRALRRELTSTAGGVFTTLFTITLTVMLIKILGQAAGGQVASQDVIALIGFQSLNYMP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + V+T +++E+++ G S I PVL + + + Sbjct: 62 IILILTGFISVLLVMTRSYQDSEIVVWFACGMSLTRWIAPVLRFGWPIVALVAALSFVAT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLD--DDLYIKISKYNPNNTLQGIFIVDSRD 180 P + ++ + + + F + ++ + ++ IF+ Sbjct: 122 PWANQQSSEYRSRFEQREDIARVSPGKFQESAAANRIFFVEGISGDASKVRNIFVNTIGA 181 Query: 181 TQTHKIYYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + A+ G + +++N G + SP D I+ F+ Y L + + + Sbjct: 182 DGKNSVVVAKEGETVIDPDGEKFVVMNQGRRYDGSPGLPDFQIVDFERYGLLIGNQSQNA 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 A +++ L + R E R+ + L++I + Sbjct: 242 ----AGERSARAL-----QMNELVAKNDGYARGELLWRIALPFMALTLMLLAIPLSFVNP 292 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 + + + + F + + Sbjct: 293 RAGRSLGLLVALLLFVVYSNTVSVFQASVAQGRATFMMAWW 333 >gi|320539289|ref|ZP_08038959.1| putative conserved inner membrane protein [Serratia symbiotica str. Tucson] gi|320030681|gb|EFW12690.1| putative conserved inner membrane protein [Serratia symbiotica str. Tucson] Length = 396 Score = 74.3 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 53/356 (14%), Positives = 133/356 (37%), Gaps = 19/356 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + +++ + V N++L + +P + Sbjct: 34 IIIKYLVRETLKSQIAILFILLLIFFCQNLVRVLGDVVDGDVPTNLVLSLLLLGVPKMAQ 93 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ G + TLI + LAIL S ++ Sbjct: 94 LILPLSLFLGLLMTFGRLYTESEITVMHACGLGKRTLIIAAMILAILTSAVAAVNVFWAN 153 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P S + ++A+ + + L E F D + +T +F+ R Sbjct: 154 PIASSYQDVVVSEAKANPSIAGLVEGQFKPSQDGNAVVFIGNVKGSTFNNVFLAQLRTNG 213 Query: 183 --THKIYYAQSGSIDLDR---QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A+ G+I+ + Q + L+ G + + +D I F +Y + Sbjct: 214 TQRPSVVVAEHGNINPQKDGSQVVTLDKGTRFEGTALLRDFRITDFNNYKAVIGHRAVAV 273 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 ++ ++ L + + R+EFH RLT V L++++ Sbjct: 274 DNTQSEQMSMKTLWQSDDPDA----------RAEFHWRLTL---VVSVVLMALLVVPLSV 320 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + ++ ++ + ++ + F + + + PI++L+ ++ + + Sbjct: 321 VNPRQGRVLSMLPAILLYLIFFLLQTALRSNAGK-GKLDPIIWLWGVNVAYFAIAL 375 >gi|297565137|ref|YP_003684109.1| permease YjgP/YjgQ family protein [Meiothermus silvanus DSM 9946] gi|296849586|gb|ADH62601.1| permease YjgP/YjgQ family protein [Meiothermus silvanus DSM 9946] Length = 337 Score = 74.3 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 41/349 (11%), Positives = 96/349 (27%), Gaps = 20/349 (5%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + Y+LR + + L V + + ++ L+ +L++ Y +P L + Sbjct: 2 LQRYLLRETLGLYTVGILIFVGLLTTDLLSSLSGVLLRQNTPLSDVLQLVVYRLPYTLGI 61 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P L+ R +EL G +L+ P L L +++S +E ++P Sbjct: 62 ALPLGLVFSLLVTLSRWIRQSELKAAYAGGIPPRSLLWPALLLGVVVSGVALWNEGWVKP 121 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + ++ + L +S G++ Sbjct: 122 EAQARFDAV---------------QYRIYYGSQLSGVLSDKVYAPEGLGVYYAQRIYPDR 166 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 I+ + G KS ++ + Q Sbjct: 167 EGARLEGVRVIEPGGAIWSADRGRWLEKSWQLQNAYRVDPDGKVTQVSLQPLPFPARFVP 226 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 + S L + + + + R + L ++ ++IV Sbjct: 227 QSSSSGALTLRLPDLHAAARVDPSVRFTLARTYANALGALVLAWLAIVVGLSLRES---- 282 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 + + FG + ++ + N + +L + Sbjct: 283 -AWAFISIVGLIFGYYVLWTASAQFAKFNVWGAYGAWLPNLVYGLLAAW 330 >gi|17987546|ref|NP_540180.1| putative permeases [Brucella melitensis bv. 1 str. 16M] gi|225852206|ref|YP_002732439.1| permease YjgP/YjgQ family protein [Brucella melitensis ATCC 23457] gi|254693440|ref|ZP_05155268.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 3 str. Tulya] gi|256044379|ref|ZP_05447283.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 1 str. Rev.1] gi|256113222|ref|ZP_05454090.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 3 str. Ether] gi|256264286|ref|ZP_05466818.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 2 str. 63/9] gi|260563731|ref|ZP_05834217.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 1 str. 16M] gi|261213693|ref|ZP_05927974.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 3 str. Tulya] gi|265990797|ref|ZP_06103354.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 1 str. Rev.1] gi|265994633|ref|ZP_06107190.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 3 str. Ether] gi|17983249|gb|AAL52444.1| putative permeases [Brucella melitensis bv. 1 str. 16M] gi|225640571|gb|ACO00485.1| permease YjgP/YjgQ family protein [Brucella melitensis ATCC 23457] gi|260153747|gb|EEW88839.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 1 str. 16M] gi|260915300|gb|EEX82161.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 3 str. Tulya] gi|262765746|gb|EEZ11535.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 3 str. Ether] gi|263001581|gb|EEZ14156.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 1 str. Rev.1] gi|263094546|gb|EEZ18355.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 2 str. 63/9] gi|326408705|gb|ADZ65770.1| permease YjgP/YjgQ family protein [Brucella melitensis M28] gi|326538429|gb|ADZ86644.1| permease YjgP/YjgQ family protein [Brucella melitensis M5-90] Length = 362 Score = 74.3 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 44/354 (12%), Positives = 102/354 (28%), Gaps = 12/354 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + Y + L L I +A ++ + N +++ ++ L +S +P ++ Sbjct: 5 TLGRYFFTRYVQITLYFLLGIFALALLLDFTENANRLANLPAYTVWAALGLSAMRVPFIM 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF L S+NR EL++ + G S + P F A+L + N + Sbjct: 65 QQMIPFVALFSAMATLISLNRKYELVVARSVGVSAWQFLLPACFGALLFGLATIFILNPL 124 Query: 122 EPKCRSTIK----QLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD 177 S + ++ + + I T Sbjct: 125 AAHGFSKAEEIAAMWKTGKVTDVSALRDPWLRQKTDEGETIIGAKSILNQGTTLADATFI 184 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 D Q + + + L L D ++ ++ + Q Sbjct: 185 QFDEQKNIKDRYDARTATLQDGYWELTDVMRF---ARGQEPQKLETFRISTQLRPEYVEE 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + L + + ++ L + LI+ + Sbjct: 242 KLASPETIPFTQLRHK-IEVARSFGYSANAFDMQYQSLLALPALLMAMTLIAATVSL--K 298 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 VR + I + F ++ S ++ + P + ++ + + F Sbjct: 299 FVRFGQSGAMILGGVIAGFVLYVV-SVLVKAFGDAGFVPPFVAAWVPVVIATFF 351 >gi|153009929|ref|YP_001371144.1| permease YjgP/YjgQ family protein [Ochrobactrum anthropi ATCC 49188] gi|151561817|gb|ABS15315.1| permease YjgP/YjgQ family protein [Ochrobactrum anthropi ATCC 49188] Length = 362 Score = 74.3 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 42/354 (11%), Positives = 100/354 (28%), Gaps = 12/354 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + Y + L I ++ ++ + + +S+ S+ L +S +P ++ Sbjct: 5 TLGRYFFIRYVQITFYFLLGIFALSLLLDFTENASKLSNLPDYSVWAALGLSAMRVPFIM 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF L S+NR EL++ + G S + P F A L + N Sbjct: 65 QQMIPFVALFSAMATLISLNRKYELVVARSVGVSAWQFLLPACFGAFLFGLATIFILNPF 124 Query: 122 EPKCRSTIKQ----LSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD 177 + + ++ + + I Sbjct: 125 AAYGFAKADEIASTWKTGKVTDVSALRDPWLRQKTDEGETIIGAKSILDQGATLADATFI 184 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 D + + + + L L D R + + + F+ Q Sbjct: 185 QFDEKKNIKVRYDARTAQLKDGHWELTDVT--RFARGEEPQKMASFQ-IETQLRPEYVEE 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + + L + + ++ L + LI+ + Sbjct: 242 KLATPDTIPFTQLRHK-IEVARSFGYSANAFDMQYQSLLALPALLMAMTLIAATVSL--K 298 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 VR + I + F ++ S ++ + P + ++ + + F Sbjct: 299 FVRFGQSGAMILGGVIAGFMLYVV-SVLVKAFGNAGFVPPFVAAWVPVVIATFF 351 >gi|62289648|ref|YP_221441.1| hypothetical protein BruAb1_0705 [Brucella abortus bv. 1 str. 9-941] gi|82699576|ref|YP_414150.1| YjgP/YjgQ permease [Brucella melitensis biovar Abortus 2308] gi|189023898|ref|YP_001934666.1| permease [Brucella abortus S19] gi|254688958|ref|ZP_05152212.1| Predicted permease YjgP/YjgQ family protein [Brucella abortus bv. 6 str. 870] gi|254697092|ref|ZP_05158920.1| Predicted permease YjgP/YjgQ family protein [Brucella abortus bv. 2 str. 86/8/59] gi|254729988|ref|ZP_05188566.1| Predicted permease YjgP/YjgQ family protein [Brucella abortus bv. 4 str. 292] gi|256257206|ref|ZP_05462742.1| Predicted permease YjgP/YjgQ family protein [Brucella abortus bv. 9 str. C68] gi|260545600|ref|ZP_05821341.1| permease YjgP/YjgQ family protein [Brucella abortus NCTC 8038] gi|260754447|ref|ZP_05866795.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 6 str. 870] gi|260757666|ref|ZP_05870014.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 4 str. 292] gi|260761493|ref|ZP_05873836.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 2 str. 86/8/59] gi|260883476|ref|ZP_05895090.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 9 str. C68] gi|297248056|ref|ZP_06931774.1| YjgP/YjgQ family permease [Brucella abortus bv. 5 str. B3196] gi|62195780|gb|AAX74080.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941] gi|82615677|emb|CAJ10664.1| Predicted permease YjgP/YjgQ family [Brucella melitensis biovar Abortus 2308] gi|189019470|gb|ACD72192.1| Predicted permease YjgP/YjgQ family [Brucella abortus S19] gi|260097007|gb|EEW80882.1| permease YjgP/YjgQ family protein [Brucella abortus NCTC 8038] gi|260667984|gb|EEX54924.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 4 str. 292] gi|260671925|gb|EEX58746.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 2 str. 86/8/59] gi|260674555|gb|EEX61376.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 6 str. 870] gi|260873004|gb|EEX80073.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 9 str. C68] gi|297175225|gb|EFH34572.1| YjgP/YjgQ family permease [Brucella abortus bv. 5 str. B3196] Length = 362 Score = 74.3 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 44/354 (12%), Positives = 102/354 (28%), Gaps = 12/354 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + Y + L L I +A ++ + N +++ ++ L +S +P ++ Sbjct: 5 TLGRYFFTRYVQITLYFLLGIFALALLLDFTENANRLANLPAYTVWAALGLSAMRVPFIM 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF L S+NR EL++ + G S + P F A+L + N + Sbjct: 65 QQMIPFVALFSAMATLISLNRKYELVVARSVGVSAWQFLLPACFGALLFGLATIFILNPL 124 Query: 122 EPKCRSTIK----QLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD 177 S + ++ + + I T Sbjct: 125 AAHGFSKAEEIAAMWKTGKVTDVSALRDPWLRQKTDEGETIIGAKSILNQGTTLADATFI 184 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 D Q + + + L L D ++ ++ + Q Sbjct: 185 QFDEQKNIKDRYDARTATLQDGYWELTDVMRF---ARGQEPQKLETFRISTQLRPEYVEE 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + L + + ++ L + LI+ + Sbjct: 242 KLASPETIPFTQLCHK-IEVARSFGYSANAFDMQYQSLLALPALLMAMTLIAATVSL--K 298 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 VR + I + F ++ S ++ + P + ++ + + F Sbjct: 299 FVRFGQSGAMILGGVIAGFVLYVV-SVLVKAFGDAGFVPPFVAAWVPVVIATFF 351 >gi|291287414|ref|YP_003504230.1| permease YjgP/YjgQ family protein [Denitrovibrio acetiphilus DSM 12809] gi|290884574|gb|ADD68274.1| permease YjgP/YjgQ family protein [Denitrovibrio acetiphilus DSM 12809] Length = 361 Score = 74.3 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 53/361 (14%), Positives = 109/361 (30%), Gaps = 8/361 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F YI++ + ++ +F+ I + Q ++S S L+ P + Sbjct: 1 MTKFNKYIIKLFVQYTVIVQVFVAIITLIANTFQHTKMLSEYNISFMTLIVYDLMKTPYL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI--SE 118 L P + T V+ ++ +N EL+ + G L P + I LS+ L+ Sbjct: 61 LYTTMPMTIVISTMLVMVTLLKNNELIAYVSLGGKIRNLAYPFIVSGIFLSVLLYFSADV 120 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 + S +++ + D +I I+ +P Sbjct: 121 INPKIMLERERFAYENIKNRTFNVSGKLTDMWLKESDSSFININLMDPTEKKIIGITEYH 180 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + Y S + I + +V P+ + + +S Sbjct: 181 LNNNFQVDYIVTYDSAEYYEGKWIEKNKKVFAMDPVPVMTDSAEEVIQERELFDELTSLP 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 VL +L + + Y + +K L ++ L+ Sbjct: 241 VLSPKFLSLKE-VRRTAEIMKKQDINTAKYYLQLYKSYAHALSVIVIILVIFPLCI--GF 297 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC--ISSIFLLMIKK 356 R I SL F +W + + + P+ F+ + L +I + Sbjct: 298 NRNHSYIAVASKSLFTGFA-YWMLMASFQSLGKTGLFSPLAANFIPIGAFFILALALIYR 356 Query: 357 K 357 + Sbjct: 357 R 357 >gi|307312964|ref|ZP_07592592.1| permease YjgP/YjgQ family protein [Escherichia coli W] gi|306907132|gb|EFN37639.1| permease YjgP/YjgQ family protein [Escherichia coli W] gi|315063568|gb|ADT77895.1| conserved inner membrane protein [Escherichia coli W] Length = 359 Score = 73.9 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 47/355 (13%), Positives = 129/355 (36%), Gaps = 19/355 (5%) Query: 9 LRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFC 68 +R +S L ++ I + ++++ + N++L + G +P + ++ P Sbjct: 1 MRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLS 60 Query: 69 FAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRST 128 + L + +E+ ++ G S+ L+K + LA+ +I ++ P Sbjct: 61 LFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAGPWSSRH 120 Query: 129 IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT--HKI 186 ++ A+A+ + L + F + + + + + + +F+ R + Sbjct: 121 QDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKGNARPSV 180 Query: 187 YYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 A SG + Q + LN G + + +D I F+ Y + + Sbjct: 181 VVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVALDPNDTD 240 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 ++ L N + + R+E + R+T + L+ + ++ Sbjct: 241 QMDMRTLWNTDTD----------RARAELNWRITLVFTVFMMALM---VVPLSVVNPRQG 287 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 ++ + ++ + F + + + P L+++ + + L ++ + Sbjct: 288 RVLSMLPAMLLYLLFFLIQTSLKSNGGK-GKLDPTLWMWTVNLIYLALAIVLNLW 341 >gi|225024725|ref|ZP_03713917.1| hypothetical protein EIKCOROL_01611 [Eikenella corrodens ATCC 23834] gi|224942520|gb|EEG23729.1| hypothetical protein EIKCOROL_01611 [Eikenella corrodens ATCC 23834] Length = 370 Score = 73.9 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 37/346 (10%), Positives = 119/346 (34%), Gaps = 20/346 (5%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 ++ ++ + ++ + + ++ +Q ++ + + + + + + + ++P+ Sbjct: 3 YQRKFIKEVSQTAMGVFVLLLATLVAVQAVKLLGGAAGGKVAADAVATLVAFWTVALMPI 62 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 V + VL+ R++E+ + ++G S I+P++ A+ ++ + ++ P Sbjct: 63 VLILTAYISALTVLSRYWRDSEMAVWLSSGLSLYGWIRPLMAFAVPFALLTALVSMLVMP 122 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLD---DDLYIKISKYNPNNTLQGIFIVDSRD 180 + ++ + + S + +F +Y + +FI + Sbjct: 123 WADARSREFAEVLKRRQDTSMVRPGVFQEFGGSTPRVYFVEKFDAGSGEAANLFIREQNP 182 Query: 181 TQTHKIYYAQSGSID--LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT-ESANSST 237 + A+ G +++ + L +G + +P D + F+ L + Sbjct: 183 QGRDTLITAERGRFAEADNKRTLELFNGRRYSGTPGMADYDEVSFERLHLVVGTAPKLVQ 242 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + L R E R+T + +I ++A Sbjct: 243 RDIHRRTVPTAKLW----------GNTNPDLRGELMWRITMPVSVLILA---LLALPLSY 289 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-PYYIPILYLF 342 + + + + + ++ + G + + I P L + Sbjct: 290 MDNRSGRSYSLLSAIGMFLLYQNGLTLVRDGISSGKIPLWPGLIVP 335 >gi|325103111|ref|YP_004272765.1| permease YjgP/YjgQ family protein [Pedobacter saltans DSM 12145] gi|324971959|gb|ADY50943.1| permease YjgP/YjgQ family protein [Pedobacter saltans DSM 12145] Length = 476 Score = 73.9 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 44/291 (15%), Positives = 97/291 (33%), Gaps = 19/291 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK L I++ + F ++ ++F+ ++ + + I+ + ++L++ GY T Sbjct: 1 MKKIHLLIVKAFIKPFFVTFFIVMFVLLMLFLFKYIDDLIGKGFEWYVILQLLGYAAATN 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + ++ N EL+ I + G S + P+ + LSI FI + Sbjct: 61 VAMALPLAVLLSSIMTFGNLGENYELVAIKSAGISLQRAMAPLFIMVTGLSIAAFIFSDY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + L + +EE +F I++ + + + ++ Sbjct: 121 MLPVANLKMGSLLYDVRNQKAAFLIEEGVFNNSIPGYSIRVEQKDKDGKTLKDVVIYDHT 180 Query: 181 T--QTHKIYYAQSGSIDLDRQAIILNDGEVH-----------------RKSPISKDISIM 221 + A +G + L H R D ++ Sbjct: 181 KGSGNTNVLMADTGEMYKTDDEKYLVLVLKHGVRYEESAGQRTYNPRERLVRYKFDETMQ 240 Query: 222 KFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEF 272 KF + + + + NL L + + Y L + Sbjct: 241 KFDLSSFNFKREDENLFKNNYQMLNLKELDSAKLASIKYFDSLANDLFRQI 291 Score = 47.3 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 52/114 (45%), Gaps = 6/114 (5%) Query: 245 QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKK 304 +++ + +++ Y E++++ T + ++ I A A++R+ Sbjct: 341 RSVKETIETRSTETQDLFKVITRYIIEYNRKFTLSVSCLVLFFIG---APLGAIIRKGGL 397 Query: 305 IHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI--LYLFLFCISSIFLLMIKK 356 P+ +S+ I F ++ S I K+ ++ P+ +++ +F ++ + L + K Sbjct: 398 GLPVVVSV-IFFLIYHIISTIGEKMARDGTISPLLGMWIAIFVLTPLGLFLTYK 450 >gi|254713811|ref|ZP_05175622.1| hypothetical protein BcetM6_10740 [Brucella ceti M644/93/1] gi|254717131|ref|ZP_05178942.1| hypothetical protein BcetM_12059 [Brucella ceti M13/05/1] gi|261218946|ref|ZP_05933227.1| permease YjgP/YjgQ family protein [Brucella ceti M13/05/1] gi|261321555|ref|ZP_05960752.1| permease YjgP/YjgQ family protein [Brucella ceti M644/93/1] gi|260924035|gb|EEX90603.1| permease YjgP/YjgQ family protein [Brucella ceti M13/05/1] gi|261294245|gb|EEX97741.1| permease YjgP/YjgQ family protein [Brucella ceti M644/93/1] Length = 362 Score = 73.9 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 43/354 (12%), Positives = 102/354 (28%), Gaps = 12/354 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + Y + L L I +A ++ + + +++ ++ L +S +P ++ Sbjct: 5 TLGRYFFTRYVQITLYFLLGIFALALLLDFTENASRLANLPAYTVWAALGLSAMRVPFIM 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF L S+NR EL++ + G S + P F A+L + N + Sbjct: 65 QQMIPFVALFSAMATLISLNRKYELVVARSVGVSAWQFLLPACFGALLFGLATIFILNPL 124 Query: 122 EPKCRSTIK----QLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD 177 S + ++ + + I T Sbjct: 125 AAHGFSKAEEIAAMWKTGKVTDVSALRDPWLRQKTDEGETIIGAKSILNQGTTLADATFI 184 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 D Q + + + L L D ++ ++ + Q Sbjct: 185 QFDEQKNIKDRYDARTATLQDGYWELTDVMRF---ARGQEPQKLETFRISTQLRPEYVEE 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + L + + ++ L + LI+ + Sbjct: 242 KLASPETIPFTQLRHK-IEVARSFGYSANAFDMQYQSLLALPALLMAMTLIAATVSL--K 298 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 VR + I + F ++ S ++ + P + ++ + + F Sbjct: 299 FVRFGQSGAMILGGVIAGFVLYVV-SVLVKAFGDAGFVPPFVAAWVPVVIATFF 351 >gi|328949933|ref|YP_004367268.1| permease YjgP/YjgQ family protein [Marinithermus hydrothermalis DSM 14884] gi|328450257|gb|AEB11158.1| permease YjgP/YjgQ family protein [Marinithermus hydrothermalis DSM 14884] Length = 346 Score = 73.9 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 42/361 (11%), Positives = 115/361 (31%), Gaps = 19/361 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + E Y+LR +G L +V + + + + + + + + +P Sbjct: 1 MTTLERYLLREVGAYLLGGLTVVVLLLLGGVLFEVFAPLLARGADPLAVGQYLAHRVPEA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + L+ M ++EL ++ +G SR ++ +++ A LL++ F++ Sbjct: 61 LVRGLPIAYLFALLLALSRMAEDSELKVLLASGISRERVLLALVWFAALLALMGFVAGES 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ +Q+ +A LA + L+ FF + + + + + + Sbjct: 121 WVPQQLQKARQVLRQAILAKPRALLQPGTFFTDAYGRLVYVGRVKDDGIAEIRVLAPGEV 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + D + +F T+ Sbjct: 181 LTAASGAFVEGRLFLEDGMRVTFEGARPRTI---------ARFARGTMPLNELAFEPP-A 230 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + L+ L + + ++ + + F L ++ A Sbjct: 231 SVANLTLAEL-RARIQEFKRSGLPYHAEATAYWRKWAEPAATISFALFAVGLAFWML--- 286 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF----LFCISSIFLLMIKK 356 + + ++ + + + P++ + L+ +++ LL + + Sbjct: 287 -GGSRSLGMVGVVTLTFAYYATWSVFRIMGEQGALPPVIAAWGPNLLYALAAGVLLGVGR 345 Query: 357 K 357 + Sbjct: 346 R 346 >gi|255535566|ref|YP_003095937.1| hypothetical protein FIC_01427 [Flavobacteriaceae bacterium 3519-10] gi|255341762|gb|ACU07875.1| membrane protein, putative [Flavobacteriaceae bacterium 3519-10] Length = 484 Score = 73.9 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 45/293 (15%), Positives = 89/293 (30%), Gaps = 22/293 (7%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + Y+++ FL + FI V I ++ + S +LK+ YL V+ Sbjct: 3 KKLDGYVIKSFLGPFLFIFSVLFFIFVVNIIWIQLAQFTGKGLSYWEILKLLAYLSVKVV 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 +V P + + EL + G S ++ P+ ++I LS FLF+ N + Sbjct: 63 QLVLPLTILLSSIMTFGDFGERYELAAMKAAGISLTRIMMPLFVVSIALSFFLFLFSNNV 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + K + F + +K + N + + Sbjct: 123 IPDFQRKAKNMLYNIAATKPALNFSPGQFIQQIPGYSVKFDEITGENGENLTGVFIHKMA 182 Query: 182 Q---THKIYYAQSGSIDLDRQAI----ILNDGEVHRKSPISKDISIM------------- 221 + A+ G +L +G + ++ + D + Sbjct: 183 NSYENQQSIVAEKGKFVQADNRNYLKLVLYNGHIFEENIGNVDYNQRIKQPDQAIKFDTL 242 Query: 222 --KFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEF 272 F + ++ + I + QN L +L E Sbjct: 243 VSHFNISEIINKALEAEQITDDYSFQNFIELNTTIEKAKKENDNILRNLSDEL 295 Score = 37.3 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 13/105 (12%), Positives = 23/105 (21%) Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 L L + + +IF LI + Sbjct: 343 LKELNEGKKPQIKDLHSYNSRIIMYQQRIFAYSMTCLIFFLIGSSLGSIIRKGGLGLPVV 402 Query: 307 PIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + I + + + E NPY L + +L Sbjct: 403 IAIMVFIIFYILNLTVENMAWAGEMNPYLASWLPNMVLFPFGAWL 447 >gi|23501573|ref|NP_697700.1| hypothetical protein BR0686 [Brucella suis 1330] gi|161618655|ref|YP_001592542.1| permease YjgP/YjgQ family protein [Brucella canis ATCC 23365] gi|163842956|ref|YP_001627360.1| permease YjgP/YjgQ family protein [Brucella suis ATCC 23445] gi|254701469|ref|ZP_05163297.1| hypothetical protein Bsuib55_11506 [Brucella suis bv. 5 str. 513] gi|254704016|ref|ZP_05165844.1| hypothetical protein Bsuib36_08824 [Brucella suis bv. 3 str. 686] gi|254707610|ref|ZP_05169438.1| hypothetical protein BpinM_11731 [Brucella pinnipedialis M163/99/10] gi|254709807|ref|ZP_05171618.1| hypothetical protein BpinB_05956 [Brucella pinnipedialis B2/94] gi|256031298|ref|ZP_05444912.1| hypothetical protein BpinM2_11713 [Brucella pinnipedialis M292/94/1] gi|256060811|ref|ZP_05450971.1| hypothetical protein Bneo5_10662 [Brucella neotomae 5K33] gi|256159412|ref|ZP_05457190.1| hypothetical protein BcetM4_10688 [Brucella ceti M490/95/1] gi|256254706|ref|ZP_05460242.1| hypothetical protein BcetB_10505 [Brucella ceti B1/94] gi|256369121|ref|YP_003106629.1| permease YjgP/YjgQ family protein [Brucella microti CCM 4915] gi|260168437|ref|ZP_05755248.1| hypothetical protein BruF5_08723 [Brucella sp. F5/99] gi|260566735|ref|ZP_05837205.1| permease YjgP/YjgQ family protein [Brucella suis bv. 4 str. 40] gi|261221886|ref|ZP_05936167.1| permease YjgP/YjgQ family protein [Brucella ceti B1/94] gi|261315100|ref|ZP_05954297.1| permease YjgP/YjgQ family protein [Brucella pinnipedialis M163/99/10] gi|261317345|ref|ZP_05956542.1| permease YjgP/YjgQ family protein [Brucella pinnipedialis B2/94] gi|261324803|ref|ZP_05964000.1| permease YjgP/YjgQ family protein [Brucella neotomae 5K33] gi|261752012|ref|ZP_05995721.1| permease YjgP/YjgQ family protein [Brucella suis bv. 5 str. 513] gi|261754671|ref|ZP_05998380.1| permease YjgP/YjgQ family protein [Brucella suis bv. 3 str. 686] gi|261757899|ref|ZP_06001608.1| permease YjgP/YjgQ family protein [Brucella sp. F5/99] gi|265988383|ref|ZP_06100940.1| permease YjgP/YjgQ family protein [Brucella pinnipedialis M292/94/1] gi|265997849|ref|ZP_06110406.1| permease YjgP/YjgQ family protein [Brucella ceti M490/95/1] gi|294852048|ref|ZP_06792721.1| hypothetical protein BAZG_00964 [Brucella sp. NVSL 07-0026] gi|306845287|ref|ZP_07477863.1| hypothetical protein BIBO1_1972 [Brucella sp. BO1] gi|23347486|gb|AAN29615.1| conserved hypothetical protein [Brucella suis 1330] gi|161335466|gb|ABX61771.1| permease YjgP/YjgQ family protein [Brucella canis ATCC 23365] gi|163673679|gb|ABY37790.1| permease YjgP/YjgQ family protein [Brucella suis ATCC 23445] gi|255999281|gb|ACU47680.1| permease YjgP/YjgQ family protein [Brucella microti CCM 4915] gi|260156253|gb|EEW91333.1| permease YjgP/YjgQ family protein [Brucella suis bv. 4 str. 40] gi|260920470|gb|EEX87123.1| permease YjgP/YjgQ family protein [Brucella ceti B1/94] gi|261296568|gb|EEY00065.1| permease YjgP/YjgQ family protein [Brucella pinnipedialis B2/94] gi|261300783|gb|EEY04280.1| permease YjgP/YjgQ family protein [Brucella neotomae 5K33] gi|261304126|gb|EEY07623.1| permease YjgP/YjgQ family protein [Brucella pinnipedialis M163/99/10] gi|261737883|gb|EEY25879.1| permease YjgP/YjgQ family protein [Brucella sp. F5/99] gi|261741765|gb|EEY29691.1| permease YjgP/YjgQ family protein [Brucella suis bv. 5 str. 513] gi|261744424|gb|EEY32350.1| permease YjgP/YjgQ family protein [Brucella suis bv. 3 str. 686] gi|262552317|gb|EEZ08307.1| permease YjgP/YjgQ family protein [Brucella ceti M490/95/1] gi|264660580|gb|EEZ30841.1| permease YjgP/YjgQ family protein [Brucella pinnipedialis M292/94/1] gi|294820637|gb|EFG37636.1| hypothetical protein BAZG_00964 [Brucella sp. NVSL 07-0026] gi|306274446|gb|EFM56253.1| hypothetical protein BIBO1_1972 [Brucella sp. BO1] Length = 362 Score = 73.9 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 43/354 (12%), Positives = 102/354 (28%), Gaps = 12/354 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + Y + L L I +A ++ + + +++ ++ L +S +P ++ Sbjct: 5 TLGRYFFTRYVQITLYFLLGIFALALLLDFTENASRLANLPAYTVWAALGLSAMRVPFIM 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF L S+NR EL++ + G S + P F A+L + N + Sbjct: 65 QQMIPFVALFSAMATLISLNRKYELVVARSVGVSAWQFLLPACFGALLFGLATIFILNPL 124 Query: 122 EPKCRSTIK----QLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD 177 S + ++ + + I T Sbjct: 125 AAHGFSKAEEIAAMWKTGKVTDVSALRDPWLRQKTDEGETIIGAKSILNQGTTLADATFI 184 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 D Q + + + L L D ++ ++ + Q Sbjct: 185 QFDEQKNIKDRYDARTATLQDGYWELTDVMRF---ARGQEPQKLETFRISTQLRPEYVEE 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + L + + ++ L + LI+ + Sbjct: 242 KLASPETIPFTQLRHK-IEVARSFGYSANAFDMQYQSLLALPALLMAMTLIAATVSL--K 298 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 VR + I + F ++ S ++ + P + ++ + + F Sbjct: 299 FVRFGQSGAMILGGVIAGFVLYVV-SVLVKAFGDAGFVPPFVAAWVPVVIATFF 351 >gi|254669827|emb|CBA04201.1| conserved hypothetical protein [Neisseria meningitidis alpha153] Length = 210 Score = 73.9 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 24/201 (11%), Positives = 65/201 (32%), Gaps = 2/201 (0%) Query: 160 KISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDIS 219 K P++TL GI I D ++ + L + ++S Sbjct: 12 WALKSGPDHTLLGIKIWARNDKNELAEAVEADSAVLNSDGSWQLKNIRRSTLGEDKVEVS 71 Query: 220 IMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQW 279 I +++ + + +++K + ++ L + + Y + ++L Sbjct: 72 IAAEENWPISVKRNLMDVLLVKPDQMSVGELT-TYIRHLQNNSQNTRIYAIAWWRKLVYP 130 Query: 280 LFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL 339 + L++ + I L + F + F ++ P ++ Sbjct: 131 AAAWVMALVAFAFTPQTTRHGNMGLKLFGGICLGLLFHLAGRFFGFTSQLYGIPPFLAG- 189 Query: 340 YLFLFCISSIFLLMIKKKYTK 360 L + + + +I+K+ + Sbjct: 190 ALPTIAFALLAVWLIRKQEKR 210 >gi|258405420|ref|YP_003198162.1| permease YjgP/YjgQ family protein [Desulfohalobium retbaense DSM 5692] gi|257797647|gb|ACV68584.1| permease YjgP/YjgQ family protein [Desulfohalobium retbaense DSM 5692] Length = 395 Score = 73.9 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 56/360 (15%), Positives = 118/360 (32%), Gaps = 14/360 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + I + + F + + + V ++L+ L S +L L ++ YL P L Sbjct: 4 RRLSREIFKELVYVFSLCLGSFLALLLVGRLLKLRELFLSQDVALLDLGQLFLYLSPFFL 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 ++ P + M+ + EL+ + G S L+ L +L + Sbjct: 64 LLLLPIASMLSVFLTFLRMSTDRELVALRAAGLSLWQLLPVTLLFLLLCTAANIGIGIYG 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSRD 180 + T L+ +F + L I + + L +F+ D+ Sbjct: 124 VSWGMDNFRATILDMAKTRTQLVLQPGVFNQDFPGLTIFARQVDRETGDLSTVFVEDTSR 183 Query: 181 TQTHKIYYAQSGSIDLD----RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES--AN 234 Q A GS+ D + L +G ++R S + L + + Sbjct: 184 GQGAIGIVAPQGSLTTDTRKGQVVFSLRNGRLYRHDRDSASVLGFGEYRIALDLDKIISG 243 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELL---ETYRSEFHKRLTQWLFPVIFGLISIV 291 + + + + L++ + E HKRL L + G+ ++ Sbjct: 244 VELEEKRPKEMSWTRLMDYRHQADLAQTRDATFDRKVDVETHKRLALPLACLALGIFAMP 303 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 A +++ +SL + F V++ + + P + L+ I + L Sbjct: 304 LAALFEGLKRH---FGFLVSLGL-FLVYYALFSAGLSLGETGTLAPAIGLWAPNILFMGL 359 >gi|322834556|ref|YP_004214583.1| permease YjgP/YjgQ family protein [Rahnella sp. Y9602] gi|321169757|gb|ADW75456.1| permease YjgP/YjgQ family protein [Rahnella sp. Y9602] Length = 364 Score = 73.9 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 46/364 (12%), Positives = 131/364 (35%), Gaps = 19/364 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETFKSQFAILFILLLIFFCQKLVRVLGAAVDGDIPTNLVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + ++E+ ++ G + +L+ L LA+ S+F ++ + Sbjct: 62 LILPLSLFLGLLMTLGKLYTDSEITVMHACGLGKRSLVIAALVLALFTSVFAGVNAIWLS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++ A+A+ + + + E F + + + +F+ R Sbjct: 122 PWSSKHQDEVLAEAKANPSMAAMVEGQFQQAQNGNAVLFVGSVKGKEFHNVFLAQLRPNG 181 Query: 183 T--HKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A G + Q ++L+ G + + + +D + F Y Sbjct: 182 NQRPSVVVADKGHMLQRADGSQQVMLDKGTRYEGTALLRDFRVTDFTDYLAVIGHQAVQL 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +++ ++ L N R+E + RLT + I L+ Sbjct: 242 DPNQSDQMTMTQLWN----------SNEPEARAELNWRLTLIVSVFIMALL---VVPLSV 288 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + ++ ++ + ++ + F + + + P+L+++ + L ++ Sbjct: 289 VNPRQGRVLSMLPAILLYLIFFLLQTSLRSNGAK-GKLDPMLWMWGTNLLYFALALVLNA 347 Query: 358 YTKI 361 + + Sbjct: 348 WDTL 351 >gi|239831520|ref|ZP_04679849.1| permease YjgP/YjgQ family protein [Ochrobactrum intermedium LMG 3301] gi|239823787|gb|EEQ95355.1| permease YjgP/YjgQ family protein [Ochrobactrum intermedium LMG 3301] Length = 362 Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 43/354 (12%), Positives = 99/354 (27%), Gaps = 12/354 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + Y + L I ++ ++ + + +S+ S+ L +S +P ++ Sbjct: 5 TLGRYFFIRYVQITFYFLLGIFALSLLLDFTENASKLSNLPDYSVWAALGLSAMRVPFIM 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF L S+NR EL++ + G S + P F A L + N Sbjct: 65 QQMIPFVALFSAMATLISLNRKYELVVARSVGVSAWQFLLPACFGAFLFGLATIFILNPF 124 Query: 122 EPKCRSTIKQ----LSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD 177 + + ++ + + I Sbjct: 125 AAYGFAKADEIASTWKTGKTTDVSALRDPWLRQKTDEGETIIGAKSILDQGATLADATFI 184 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 D + + + L L D R + + + F+ Q Sbjct: 185 QFDEKKNIRERFDARRAQLRDGHWELTDVT--RFARGEEPQKMASFQ-IETQLRPEYVEE 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + + L + + ++ L + LI+ + Sbjct: 242 KLATPDTIPFTQLRHK-IEVARSFGYSANAFDMQYQSLLALPALLMAMTLIAATVSL--K 298 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 VR + I + F ++ S ++ + P + ++ I + F Sbjct: 299 FVRFGQSGAMILGGVIAGFMLYVV-SVLVKAFGNAGFVPPFVAAWVPVIIATFF 351 >gi|304392006|ref|ZP_07373948.1| permease [Ahrensia sp. R2A130] gi|303296235|gb|EFL90593.1| permease [Ahrensia sp. R2A130] Length = 372 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 38/361 (10%), Positives = 109/361 (30%), Gaps = 16/361 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + +Y+ + R+ + L F+ ++ +L+ + ++ I P + Sbjct: 5 TLSVYLAKNFLRNTMFVFLVFFFLIALVDMLELSRRTARIDDVGFFDVVSIVMLRAPVLS 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF + L +N+ EL++ +G S + P+ A ++ + + + N + Sbjct: 65 ENIVPFAVLFGASASLLLLNKRLELVVARASGVSVWQFLAPICAAAAVVGLVMGLIYNPL 124 Query: 122 EPKCRST-------IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF 174 + +++ + + T+++ D L ++ Sbjct: 125 SLRLQASSLSLEGVVFAKNTGVTSDTTWNFWTRIARPDGDMVLRAAVAAERGKKLSGVSL 184 Query: 175 IVDSRDTQTHKIYYAQSGSIDL----DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT 230 + +D + + A S + E + + ++ + Sbjct: 185 YLFDKDGKPEQRIDAASANFAEAVPGTDSLPNRYVLERANILTVGEKPKVVPVMVVPVSI 244 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 + A + L + E +++ +H L L V L++ Sbjct: 245 TAELLEIRQTSAERVSFWDL-DDQAELAERAGRPPEPFQTRWHSVLALPLLFVAMVLLAG 303 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 + R I + F ++ + ++ N P++ + Sbjct: 304 TVSLT--FARFGINGKRILTGVVAGFVLY-VLTKLVVTFGSNGLVSPVIAAWSPATVGSL 360 Query: 351 L 351 + Sbjct: 361 I 361 >gi|282892298|ref|ZP_06300694.1| hypothetical protein pah_c221o032 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281497889|gb|EFB40240.1| hypothetical protein pah_c221o032 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 361 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 40/341 (11%), Positives = 111/341 (32%), Gaps = 5/341 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 +E Y R + + F + + +I S+ + + Y + L Sbjct: 9 SIWERYFFREVVKLFCVFIGSFYGLYVLIDFSSHTTQFSTH-FQWSEIFSYYFYELIRRL 67 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 ++ PF + T L S++ N EL+ + +G S +L++P + + + ++ ++ + + Sbjct: 68 DVILPFALMLATIKTLCSLSTNNELVALMASGMSLKSLLRPFIIIGLFFTVLMYGNAEFL 127 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 PK + +KQ+ + + + DD + +Y + Sbjct: 128 LPKAQKGLKQIHDRHTSLKNKLENRGFVQHIILDDQTQILFQYYDEERQFFFDSYWIKSA 187 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 +++ + + + + S ++ + + + Sbjct: 188 DDIFRIKYLFPHLEVPLGRYVHHLTRNQN-DELVESASFVEKEFPQIYFNQKKLQETLSL 246 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 +Q+L+ L+ P+N E S F+ ++ + + + + + Sbjct: 247 PEEQSLTDLVQQLPHNNRISHEKEAQVVSHFYHKMALPWLCLFAVIAPAPFCVRFS---R 303 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 + I+ F+ + + PI ++ Sbjct: 304 GLPVFMIYACSIFGLITFYLTMDAALILAKRQVLDPIWAIW 344 >gi|121605070|ref|YP_982399.1| permease [Polaromonas naphthalenivorans CJ2] gi|120594039|gb|ABM37478.1| permease YjgP/YjgQ family protein [Polaromonas naphthalenivorans CJ2] Length = 373 Score = 73.5 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 46/315 (14%), Positives = 111/315 (35%), Gaps = 20/315 (6%) Query: 8 ILRCIGRSF---LMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 I + + R+F L+ ++ I I +++ + S + S ++ Y LP + Sbjct: 7 IRKELARAFGATLV---VLITIVMTIVLIRTLGQASRGSISPQDVMLYMAYSGLGRLPTI 63 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 + + LT M R++E+++ +G ++P+ A + + + + + P Sbjct: 64 LTISLFIAMVSTLTRMYRDSEMVVWFTSGQGLAGFLRPLFHFAWPVLLVITLMALFVWPW 123 Query: 125 CRSTIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIKISKYNPNNTLQGIFIVDSRDTQT 183 K + ++ Q + +F + I + + + + Sbjct: 124 TNQQTKDMQSRYQQRGDLDRITPGVFQESSSGNRVFFIDRDLAGEKASTNVFIAATEKGK 183 Query: 184 HKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN-SSTIVL 240 I AQSG I+ D + ++L++G+ + I FK Y ++T + Sbjct: 184 SSITTAQSGRIESRGDARFLMLSNGQRLENDLEKSALKISDFKEYGVKTNDSGLLGESAP 243 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 +A + L+ + + E RL L F +++ A Sbjct: 244 EAKLLSTRALI----------KDPTRSNLGELAWRLGLALSAFNFVFLAVALAKVNPRGG 293 Query: 301 QRKKIHPIFISLSIS 315 + + + ++ + Sbjct: 294 RSGNMMFVVLAFVVY 308 >gi|313205632|ref|YP_004044809.1| permease yjgp/yjgq family protein [Riemerella anatipestifer DSM 15868] gi|312444948|gb|ADQ81303.1| permease YjgP/YjgQ family protein [Riemerella anatipestifer DSM 15868] gi|315022637|gb|EFT35662.1| hypothetical protein RAYM_03529 [Riemerella anatipestifer RA-YM] gi|325334940|gb|ADZ11214.1| permease YjgP/YjgQ family protein [Riemerella anatipestifer RA-GD] Length = 484 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 45/267 (16%), Positives = 85/267 (31%), Gaps = 6/267 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K + YI++ FL + FI V I ++ + S + K+ Y+ +V Sbjct: 2 LKKLDRYIIKTFFGPFLFIFSVLFFIFLVNIIWIKLYQFTGKGLSPFEIGKLLFYMGVSV 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + MV P + + + EL + G S +++P++F+ LLSI LFI N Sbjct: 62 VNMVLPLTVLLSSIMTFGAFGERYELAAMKAAGISLFRIMRPLIFVVTLLSIILFIFSNN 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P K + + F +K K + N I+ ++ Sbjct: 122 VIPDFNRKAKNMLYNIAVTKPALNFTAGQFIGAIPGASVKFDKISGENGENLEGIIIHKE 181 Query: 181 ---TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + A G + L ++ S + + S Sbjct: 182 VNGNNPQQTIIAPKGKFVPAQNRNYLKLILYKGYVYEDENTSYNYNERTK---QPNKSIK 238 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPEL 264 ++S L+N Sbjct: 239 FDSLVAHFDVSELVNKAIEEEKITENY 265 Score = 38.8 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 31/347 (8%), Positives = 78/347 (22%), Gaps = 16/347 (4%) Query: 16 FLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTN 75 F+++ L I+ + ++ N + + + K + P + Sbjct: 106 FVVTLLSIILFIFSNNVIPDFNRKAKNMLYNIAVTKPALNFTAGQFIGAIP-----GASV 160 Query: 76 VLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAK 135 ++ + + P + F+ + Sbjct: 161 KFDKISGENGENLEGIIIHKEVNGNNPQQTIIAPKGKFVPAQNRNYLKLILYKGYVYEDE 220 Query: 136 AQLALTFSYLEENLFFRLDDDLYIKIS-------KYNPNNTLQGIFIVDSRDTQTHKIYY 188 ++ D L + D Sbjct: 221 NTSYNYNERTKQPNKSIKFDSLVAHFDVSELVNKAIEEEKITENYQFQTYLDINGSIAQL 280 Query: 189 AQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLS 248 + D + L + + K + + + + T +L Q ++ Sbjct: 281 EKEQKTRFDNISNELVAQNNFYVNYLDKSKNKKATQPFKIDTLKKEKKIEILYNAYQKIN 340 Query: 249 FLLNPNPNN----PNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKK 304 L +N + + L+ + +IF LI Sbjct: 341 TLKEDKKSNKDPELYEMLKQRSKMIMYQQRILSFSITCIIFFLIGSSLGSIIRKGGIGFP 400 Query: 305 IHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + + I + + + K + NPY L + I+ Sbjct: 401 VVIAIVIFIIFYVLNLTVENLSWKGKLNPYLAAWLPNLILAPLGIWF 447 >gi|58040479|ref|YP_192443.1| hypothetical protein GOX2051 [Gluconobacter oxydans 621H] gi|58002893|gb|AAW61787.1| Hypothetical transmembrane protein [Gluconobacter oxydans 621H] Length = 380 Score = 73.1 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 36/330 (10%), Positives = 101/330 (30%), Gaps = 1/330 (0%) Query: 10 RCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCF 69 R + FL+ +V + ++ +L++ + + +L + +P + + P F Sbjct: 30 RALLGRFLLCGAVLVSLLEILALLEKTTPILNRHLGFRGILTFAFLHLPALSIDILPLAF 89 Query: 70 AMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTI 129 + +LT M ++E+ + G S L + +L ++ I ++ + P C + + Sbjct: 90 MVGALFLLTQMTLSSEISALRAAGLSTPALYRLLLPAVLIAGIGGTCAQYWLVPACENAL 149 Query: 130 KQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYA 189 + E+ + + T + Sbjct: 150 TTWWNRTDPLAGQDGQPEDNILWFRAGPTLVRIGQIAQGGTFLRDVTIYHRDNTGLLTGT 209 Query: 190 QSGSIDLDRQAIILNDG-EVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLS 248 + ++ R DG + S +++ K S + + + + + Sbjct: 210 EHTNVLTYRDGQWHPDGAQDLSLSDDKSYVNVTKGDSTFVIPATPSVIMTLSQNGATVTP 269 Query: 249 FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPI 308 ++ + TYR + + + L+++ R + Sbjct: 270 AQVSAILHKGAPASLPRATYRMALFSGMILPVEIAVMLLLTLPVIYIPPRAGLRNPLPVY 329 Query: 309 FISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 ++ + F + G + P + + Sbjct: 330 VLAAGMGFVILQGMISALGNAGTLPAPLAV 359 >gi|119356768|ref|YP_911412.1| permease YjgP/YjgQ family protein [Chlorobium phaeobacteroides DSM 266] gi|119354117|gb|ABL64988.1| permease YjgP/YjgQ family protein [Chlorobium phaeobacteroides DSM 266] Length = 442 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 53/234 (22%), Positives = 90/234 (38%), Gaps = 6/234 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y+L+ F+ + + I+F+ + + LL++ + Sbjct: 1 MKIIDRYLLKSHIGPFIFAFITILFVLILQFFAVFSERLLGKGIGWMTLLELVVVQSAWM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + +M +E+ I +G S L+ PVL A LLS+ N+ Sbjct: 61 VSFTIPMAVLIAVVMAFGAMTNASEITIFRASGISLYRLMAPVLLAATLLSLVAERFNNV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN-TLQGIFIVDSR 179 + P+ K L A + L EN F L D I + + +P ++GI I D Sbjct: 121 VLPEANYKAKSLMADIVKSKPVFGLTENAFSTLIDGYSILVRQTDPETGAIRGIVIYDFT 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAII----LNDGEVHRK-SPISKDISIMKFKSYTL 228 I A+SG ++ L +GE+H P K+ M FK + Sbjct: 181 RPDFRTIVTAESGGVNFSSDYHYLIITLENGEIHEIQQPQHKEYRKMSFKKHRF 234 Score = 52.7 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 39/108 (36%), Gaps = 6/108 (5%) Query: 251 LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFI 310 L+ + + Y +E+HK+ ++F L+ R+ + Sbjct: 329 LDQELHRMESDTGMYNKYMAEYHKKYALAFACIVFALVGAPLGVLA---RRGGFGIGAGL 385 Query: 311 SLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--FCISSIFLLMIKK 356 SL F ++W K+ + P L ++L I I L ++ + Sbjct: 386 SLVF-FVLYWILMISGEKLAERGLLDPGLSMWLGNITIGFIGLFLLYR 432 >gi|121611822|ref|YP_999629.1| permease [Verminephrobacter eiseniae EF01-2] gi|121556462|gb|ABM60611.1| permease YjgP/YjgQ family protein [Verminephrobacter eiseniae EF01-2] Length = 372 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 50/336 (14%), Positives = 122/336 (36%), Gaps = 22/336 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ I + + RSF + + +V + + +++ + + + S + ++ + G+ + LP Sbjct: 2 LFDSSIRKELARSFGATLVVLVTVVMTMMLIRTLGQAARGSVSPSDVMLVMGFTVVGQLP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + + L+ M R++E++I +G +L++P+L A + + + + ++ Sbjct: 62 TIASLSLFIAVVGTLSRMYRDSEMVIWFASGRGLASLVRPLLRFAWPVMLVIAVLSLLVW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT-------LQGIFI 175 P + I+QL + + + F + + G I Sbjct: 122 PWANAQIQQLKTRYEQRSDIDRIAPGEFQESSNGNRVFFIDKGNPAPLAGNDAAQTGSNI 181 Query: 176 VDSRDTQTHKIYYAQSG---SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT-E 231 + + + + ++ +L+DG+ S + I +F Y + Sbjct: 182 FIAASDGRQESVTSARSARLQLQDGQRMAVLSDGQRLETSHDRPGLKISEFSEYVMHIGS 241 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 + + L + LL + L YR+E RL L + F L+ + Sbjct: 242 APPGAAEDLAVKTRATHELLL----------KSLPAYRAELGWRLGLVLAALNFVLLGLA 291 Query: 292 A-ADKRALVRQRKKIHPIFISLSISFGVFWGFSYII 326 + R + +F + + G S++ Sbjct: 292 VTSVNPRAARSTSMLFALFAFIVYYNLMTLGQSWVG 327 >gi|237747610|ref|ZP_04578090.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] gi|229378972|gb|EEO29063.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] Length = 357 Score = 72.7 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 40/337 (11%), Positives = 120/337 (35%), Gaps = 18/337 (5%) Query: 23 IVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNR 82 + I + +++ + + + + +L + G+ LP++ + V+T + Sbjct: 3 LFTITITMMLIRILGQAAKGRVASDDVLALLGFTSLNYLPIILILTGFVSVLLVVTRSYQ 62 Query: 83 NTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTF 142 ++E+++ +G S ++PV+ AI + + + + P + + + Sbjct: 63 DSEMVVWFASGLSLTRWLRPVIEFAIPIVVLVSLLGFFATPWAYRQSAEFRERFEKREDI 122 Query: 143 SYLEENLFFRLDD-DLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQ-- 199 + + F + K + + ++S ++ G+++ + + Sbjct: 123 ARISPGKFQESAAAQRVFFVEKMSDDLNKVKNVFINSTRNGNITTVVSKEGTVETNEKGE 182 Query: 200 -AIILNDGEVHRKSPISKDISIMKFKSYTLQT-ESANSSTIVLKANDQNLSFLLNPNPNN 257 I+L+DG + ++P IM F YT A+ S + A L+ ++ Sbjct: 183 KFIVLDDGIRYEETPDQSGFRIMDFDKYTAYIASKADMSGTNVSARSMTTMELMTDINSH 242 Query: 258 PNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFG 317 E R+ ++ ++ + + + + I++ + Sbjct: 243 KQG----------ELLWRIGLPFMAILLI---LLGIPLGFVNPRAGRSFNLIIAVLLYMT 289 Query: 318 VFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 S++ + Q + + L I ++ ++++ Sbjct: 290 YSNLLSFMQAYVVQKKIMFGLAWWPLHLIVALVIVLL 326 >gi|291296718|ref|YP_003508116.1| permease YjgP/YjgQ family protein [Meiothermus ruber DSM 1279] gi|290471677|gb|ADD29096.1| permease YjgP/YjgQ family protein [Meiothermus ruber DSM 1279] Length = 346 Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 39/342 (11%), Positives = 113/342 (33%), Gaps = 15/342 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+++ +G S L + +V + + + + + ++ + + +P Sbjct: 1 MSVLDRYLIKEVGASVLGALAVVVLALLGGALYEVLAPLLARGADPWVVSQYLAFRVPEA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P F VL+ M +EL + G S++ ++ P+L L LL + + + Sbjct: 61 LVRGAPLAFLFALLLVLSRMGEESELKAMLAGGVSKLRVLFPLLLLGTLLFVICLAAADS 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ + + +A L + L+ + + + + Q I Sbjct: 121 LVPRSLQQGQNVLRQAVLQKPRALLQPGTRLVDAYGRIVYVGEVSDAGIGQVRVITAEEI 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + ++ ++L+ G ++ ++ +F+ T+ + Sbjct: 181 LVAEQGRF--------EQGTLVLSQGMRVTY-GGARPRTVARFERATVPLVELSLEPPGG 231 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 ++ L + + H++ + F + ++ A Sbjct: 232 -LFSLTVAEL-RQRIAQYRAQGLPYHAELTALHRKWAEPAAVYSFAIFAVGLAFFLL--- 286 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 + + + +++ + + + PIL + Sbjct: 287 -GGSRSLGMLGVVVLTFIYYATWSVGRIMGEQGVLHPILAAW 327 >gi|254718822|ref|ZP_05180633.1| hypothetical protein Bru83_04670 [Brucella sp. 83/13] gi|265983807|ref|ZP_06096542.1| permease YjgP/YjgQ family protein [Brucella sp. 83/13] gi|306838744|ref|ZP_07471578.1| permease YjgP/YjgQ family protein [Brucella sp. NF 2653] gi|264662399|gb|EEZ32660.1| permease YjgP/YjgQ family protein [Brucella sp. 83/13] gi|306406146|gb|EFM62391.1| permease YjgP/YjgQ family protein [Brucella sp. NF 2653] Length = 362 Score = 72.7 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 43/354 (12%), Positives = 102/354 (28%), Gaps = 12/354 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + Y + L L I +A ++ + + +++ ++ L +S +P ++ Sbjct: 5 TLGRYFFTRYVQITLYFLLGIFALALLLDFTENASRLANLPAYTVWAALGLSAMRVPFIM 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF L S+NR EL++ + G S + P F A+L + N + Sbjct: 65 QQMIPFVALFSAMATLISLNRKYELVVARSVGVSAWQFLLPACFGALLFGLATIFILNPL 124 Query: 122 EPKCRSTIK----QLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD 177 S + ++ + + I T Sbjct: 125 AAHGFSKAEEIAAMWKTGKVTDVSALRDPWLRQKTDEGETIIGAKSILNQGTTLADATFI 184 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 D Q + + + L L D ++ ++ + Q Sbjct: 185 QFDKQKNIKDRYDARTATLQDGYWELTDVMRF---ARGQEPQKLETFRISTQLRPEYVEE 241 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + L + + ++ L + LI+ + Sbjct: 242 KLASPETIPFTQLRHK-IEVARSFGYSANAFDMQYQSLLALPALLMAMTLIAATVSL--K 298 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 VR + I + F ++ S ++ + P + ++ + + F Sbjct: 299 FVRFGQSGAMILGGVIAGFVLYVV-SVLVKAFSDAGFVPPFVAAWVPVVIATFF 351 >gi|301048205|ref|ZP_07195241.1| conserved hypothetical protein [Escherichia coli MS 185-1] gi|300299963|gb|EFJ56348.1| conserved hypothetical protein [Escherichia coli MS 185-1] Length = 356 Score = 72.7 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 66/347 (19%), Positives = 132/347 (38%), Gaps = 18/347 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++F + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFFFARYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYASVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + I QL ++Q L L F D+ I + +N ++ + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 +I+ A+S + ++ ++L++G + +D + +++ L + S Sbjct: 181 ANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQSP 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 V + + P + +E R ++ L ++ ++A Sbjct: 241 NVKRKAKSVTELARSVFPAD-----------HAELQWRQSRGLTALLMA---LLAISLSR 286 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFL 343 + ++ + + + +F+G + IP L+L Sbjct: 287 VKPRQGRFSTLLPLTLLFVAIFYGGDVCRTLVANGAIPLIPGLWLVP 333 >gi|153951328|ref|YP_001398257.1| hypothetical protein JJD26997_1188 [Campylobacter jejuni subsp. doylei 269.97] gi|152938774|gb|ABS43515.1| putative membrane protein [Campylobacter jejuni subsp. doylei 269.97] Length = 341 Score = 72.3 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 54/324 (16%), Positives = 116/324 (35%), Gaps = 14/324 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+L + L + I ++ +Q L SS S LLK+ G+++P + Sbjct: 1 MKLSLRYVLNQFLSTNLSIFFVLFAIVSMVFFIQLAKLTSSIEISFLDLLKLYGFMLPRI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P F + T L +++ E +++ G S + L K L +A L+S F+ + + Sbjct: 61 LIFTLPISFFISLTLALFRLSKENESIVLFTLGFSPMILAKFFLKIASLISAFMLVVALV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + F+Y + D + + + + ++ + Sbjct: 121 MTPIVFELQDNFVNYKSTQVKFNYKTGEFGQKFLDWMIFIEKQDSDKHENIIMYRPKHKA 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKS-PISKDISIMKFKSYTLQTESANSSTIV 239 ++ A+ + + + + + + I +F + + T+ + Sbjct: 181 GDKEQLIIAKEAHVQRKDDSFAFSLNQGKMYNFEQGQSIFSGEFDTLVVNTQFNTDNLQT 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 K + N+ N P+ + +T LFP+ L ++ Sbjct: 241 KKFYE---------YWNDLNENPQRAREFVI----YITIALFPLASTLFALCFGLVTYRY 287 Query: 300 RQRKKIHPIFISLSISFGVFWGFS 323 + +F ++I FG+ FS Sbjct: 288 EKGYVYLGMFGVIAIYFGLLSSFS 311 >gi|226357375|ref|YP_002787115.1| membrane protein; permease [Deinococcus deserti VCD115] gi|226319365|gb|ACO47361.1| putative membrane protein; putative permease [Deinococcus deserti VCD115] Length = 347 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 46/356 (12%), Positives = 101/356 (28%), Gaps = 12/356 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 ++LR + R + + + + + + + L + G ++PT+L Sbjct: 3 SILTRFVLREVLRWYAAGAALFLTLQMTDVLSTTVAKLLTYDPPLWKAVAAFGAILPTIL 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + M R++E I G ++L+ P+L ++ + + + Sbjct: 63 NRTLVLAVPFAILLAFSRMQRDSEFKAILAAGVRPLSLVWPLLAPFAVVGLIAGYNAGTL 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + +E+ F LY N + Sbjct: 123 VPAGLKQWDRAWYRIYEQTPPPPTQEHYTFAPAGALYYASRIVNAKGGDRAELTGVMVQR 182 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 A SG D + L + V R + + + + Sbjct: 183 GEET-LTATSGVWDAKARTWTLQNAWVVRPGQPPRQKTGALVLPQRDTLQPPPAEG---- 237 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + + L + Y+ + R+ + PV+F + A L+R Sbjct: 238 -KQLSNAQLRAGLKRELSPAQR--RDYQYQLATRVADPVTPVVFA---LAAGALGLLIRS 291 Query: 302 RKKIHPIFISLSISFGVFWGFS-YIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R + SF + W + + +P L F + + L + Sbjct: 292 RATAFAAVLVFIASFYILWSTAPQLARAGAMDPALAAWLPNLTFLLLAGVLAWRLR 347 >gi|297537470|ref|YP_003673239.1| permease [Methylotenera sp. 301] gi|297256817|gb|ADI28662.1| permease YjgP/YjgQ family protein [Methylotenera sp. 301] Length = 372 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 42/360 (11%), Positives = 116/360 (32%), Gaps = 19/360 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F +L + + + L ++ I + + L + + + I G+ I +P Sbjct: 2 LFRRSLLHELIATASGTFLILIGIVIAQRAGYLVQLAAKGVLPNDAITTILGFNIIRFMP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ + L+ R++E++I + G S + I+P+L A + + + + Sbjct: 62 LLLSLSLFLAILLTLSRWYRDSEMVIWFSAGLSITSWIRPILVFATPIVVIIAFLSLFVT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + ++ + + + + +F + + I Sbjct: 122 PWATNKVEDFRVQLESRDDLAAISPGVFKESAHADRVFFIESFDELGNIVKNIFVQSIQH 181 Query: 183 THKIYYAQSG----SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + +++ G + + + + S +F+ Y ++ E++ + Sbjct: 182 QKLGIIVAAQGSRLVEKNGDNFLLMEHGHRYEGARGTSEYSTTEFEKYAIRVEASEAKRE 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + L+ +E RL + +I ++A AL Sbjct: 242 PPSTQSISSRDLIM----------NKSNNNIAELQWRLAMPVSALILA---LLAIPLSAL 288 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN--PYYIPILYLFLFCISSIFLLMIKK 356 + + +++ I + I I Q I + + L + +F + ++ Sbjct: 289 DPRAGRSANFALAIVIYIIYNNLLNIIQAWIAQGKVSGIIGLWPIHLVFGTLVFYMFYRR 348 >gi|212212731|ref|YP_002303667.1| hypothetical membrane spanning protein [Coxiella burnetii CbuG_Q212] gi|212011141|gb|ACJ18522.1| hypothetical membrane spanning protein [Coxiella burnetii CbuG_Q212] Length = 372 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 48/342 (14%), Positives = 119/342 (34%), Gaps = 21/342 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + I + L + L ++ I Q + +N ++ ++ +++I +P +L Sbjct: 4 IVFRYLCKEILGTLLATTLILLIIFMTNQFVHYLNDAAAGKITVKAVMEIMSLQVPLLLG 63 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + L M + E++I+ G SR ++ ++ LA + + + +E Sbjct: 64 YLLPLGLFLGGLLALGRMAVDHEMVILTACGVSRAQIVGMLIVLATFIGVIVAWLMLSVE 123 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV------ 176 PK + ++ A + + F L + + + ++ + + + Sbjct: 124 PKMQWYRVKILKDAVATASLEKIVPGRFQPLSSNGQVFYAGGVNDHHQKMLNVFLAQSET 183 Query: 177 --DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + A S I+ +G + P +MKF Y ++ S Sbjct: 184 AGGKQRWDLVSADQAGEYSTAKGENFILFKNGFRYVGIPGELKYDVMKFGEYGIRLTSP- 242 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + I + + S L + + + +E R+ L +F L+ Sbjct: 243 AMDITGRVDAMPTSKLWHLHSKDLKAA--------AELQWRIAMPLSVWLFALL---IVP 291 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 ++ K + ++ I G + F ++ ++ Sbjct: 292 LSEANPRKGKFAQMLPAVLIYIG-YANFMFLGRTWIEDGVIS 332 >gi|23013662|ref|ZP_00053531.1| COG0795: Predicted permeases [Magnetospirillum magnetotacticum MS-1] Length = 312 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 87/304 (28%), Gaps = 8/304 (2%) Query: 54 GYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIF 113 +P +L + PF + + R EL++ G S I PVL +A + IF Sbjct: 3 FLKLPQMLHTILPFAVMIGAMVCFWRLTRTHELVVARAAGISAWQFITPVLAVAGMFGIF 62 Query: 114 LFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI 173 + N + S ++L + A + ++ + L + + Q Sbjct: 63 EITTFNPMAAAMYSRYERLQDELLAAKSSAFDISEVGLWLREPHDDGEMVVHSETVRQEG 122 Query: 174 FIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVH----RKSPISKDISIMKFKSYTLQ 229 ++ RD + + L DG K + Q Sbjct: 123 LVLHIRDAHFFLYDRPDHFYQRIAAETASLEDGAFEVRRAWVMEGGKPSVFKEKMRIPTQ 182 Query: 230 TESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 + L +R L + L++ Sbjct: 183 LTLDRIHDNFASPETLSFWQL-PGFIRFFERAGFTANKHRLYLQSLLASPVLYCGMVLMA 241 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF-LFCISS 348 V + + R + I ++ F V++ FS +I+ + + L + + Sbjct: 242 AVFSLRPNT-RSGGLLARIGGGVAAGFAVYF-FSKVIYALGLSATLPQTLAAWTPPLFAG 299 Query: 349 IFLL 352 + L Sbjct: 300 LIGL 303 >gi|93004885|ref|YP_579322.1| permease YjgP/YjgQ [Psychrobacter cryohalolentis K5] gi|92392563|gb|ABE73838.1| permease YjgP/YjgQ [Psychrobacter cryohalolentis K5] Length = 408 Score = 72.3 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 38/385 (9%), Positives = 114/385 (29%), Gaps = 30/385 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K Y+ + + + + + + V L ++ + + ++ ++ Y P Sbjct: 27 LKVLSRYVKLNALLAIIAAVIGLWALQLVFSYLSELDSL-DGSYTMGEAIRYIFYRSPYF 85 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + L + N+EL+++ G S ++ VL A++ + Sbjct: 86 LEQFIPTGALLGAVVGLGLLANNSELVVMRAAGISVYRIVSWVLQPAMIFVVLALFINQF 145 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF------ 174 + P +++++ +L S ++ +K + ++ L + Sbjct: 146 VLPYSNQLANEINSEDNSSLVTSVRGYWTVQPRFENTKDGSAKPDGSDILYIDYADVKGN 205 Query: 175 ------IVDSRDTQTHKIYYAQSGSIDLDR--------------QAIILNDGEVHRKSPI 214 + +A+ G LN+ + Sbjct: 206 IGQVKRWHLDNNGNLQTAIHAEGGKYIGREALVTASSKPSEQYRYEWQLNNMTKLMINQG 265 Query: 215 SKDISIMK-FKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFH 273 + + + +L + + +A D +L+ L L + F Sbjct: 266 FESSQAISPTDTLSLPFAPESVYLLTRQAEDLSLTQLYEHRQFMRQQGTRSLS-HELAFW 324 Query: 274 KRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP 333 ++L L + +++ + + + F + Sbjct: 325 QKLLSPLSILSLVIVACSFVFGSLRTHSLGLRIVVALLFGLLFSYVQDLVGFVSLATGFS 384 Query: 334 YYIPILYLFLFCISSIFLLMIKKKY 358 + ++ L + + + ++K++ Sbjct: 385 PLM-MVILPIIASALLGGYLLKRQM 408 >gi|33597808|ref|NP_885451.1| putative integral membrane protein [Bordetella parapertussis 12822] gi|33574237|emb|CAE38569.1| putative integral membrane protein [Bordetella parapertussis] Length = 370 Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 36/362 (9%), Positives = 124/362 (34%), Gaps = 8/362 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ ++ I + +V + + +++ + + + +++L ++ + T Sbjct: 1 MSLFKRSVVSEITSHAGVVFSTLVVVWLSVLLVRLLGEAAGGSIGADVVLGLAAFSTITA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP + + +T R +E+++ +G S ++PV +A+ +++ + + Sbjct: 61 LPTILAVSLFIAVLTTVTRNYRESEMVVWFASGLSLADWLRPVARVAVPIAMLVAALTLV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P I + + + S + F + ++ + + Sbjct: 121 ASPWAYRQIGEYRERFEQRSDLSKVTAGQFAESGRGDRVFFAEDPVRPGDELGAVFARSI 180 Query: 181 TQTHKIYYAQSGS----IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 S + + + ++L +G + P + +I ++ F Y ++ ES Sbjct: 181 DPEWLSVLTASNARSETLPNGDRFLVLGEGHRYDLKPGTPEIRLVNFDQYGVRLESKAGE 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + +A + + + ++ S+ R+ L + L++I Sbjct: 241 DPMAEARAAAER--FSKARSTMQLVQDNTDSSWSQIMWRVAMPLAALNLALLAIPLGAVN 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + + + + + I + + + ++ ++ + ++ + Sbjct: 299 PRLGRSGDLLIAGLVGLLYMNMINLSRAWISSGKIS--FSIGVWAVHAVVALLAAYLLMR 356 Query: 357 KY 358 + Sbjct: 357 RL 358 >gi|157164267|ref|YP_001466583.1| ribonuclease PH [Campylobacter concisus 13826] gi|112800701|gb|EAT98045.1| permease YjgP/YjgQ [Campylobacter concisus 13826] Length = 342 Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 58/360 (16%), Positives = 118/360 (32%), Gaps = 20/360 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+L +F + I ++ +Q + S S L K+ +++P V Sbjct: 1 MSRVNKYLLFNFLGTFASLFSTLFLIMSIVFFIQIARITSYIEISFGELFKLYSFMLPRV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V P F + L +++ E ++I G S + + L + +LS L + + Sbjct: 61 LLFVVPIAFFVSLAMTLFRLSKENESIVIFTLGGSPNKIARFFLAFSAILSAALLVIAIV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN--TLQGIFIVDS 178 + P + + + D + S+ N T + I + + Sbjct: 121 MIPIAAQLNANFIDYKKTVAKLNLKPTQFGQKFSDWMVYVGSESEDKNGTTYKDIVMFNP 180 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + ++ A++ I Q+I L+ E + FKS ++T + + Sbjct: 181 FVKDSQRLITAKNAKITNVNQSIELSLNEGKMYDIKDEIYHQSNFKSMKIRTAQSEEISD 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 V + + + +F + LFP+ L +I Sbjct: 241 VGSIKEYWM-------------EAASSNKRKKDFSTYVLVALFPLASTLFAISLGIVTYR 287 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + F L F + FS + I ++FL ++ I ++Y Sbjct: 288 YEKGMVYVGTFGVLFGYFTLIMLFSS-----KPALAIPLIFFVFLIAGVLLYKAKITRRY 342 >gi|260466947|ref|ZP_05813129.1| permease YjgP/YjgQ family protein [Mesorhizobium opportunistum WSM2075] gi|259029244|gb|EEW30538.1| permease YjgP/YjgQ family protein [Mesorhizobium opportunistum WSM2075] Length = 360 Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 43/359 (11%), Positives = 94/359 (26%), Gaps = 10/359 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 + Y + L ++ + ++I + + + + ISG +P ++ Sbjct: 4 TLGRYFFFRYVAITIWFFLGLLALVFLIDFTELSGRTTGLPGFTYGTAMAISGLRMPMIM 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PF L S+NR EL+I + G S + P A+L + N + Sbjct: 64 LQTVPFVGLFSAMATLVSLNRRYELVIARSAGVSAWQFLLPCCIGALLFGVVSVGIINPL 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD----DLYIKISKYNPNNTLQGIFIVD 177 S +Q+ + + + + + + D I + Sbjct: 124 AAHAFSLSEQIETQLRSGKSNTVSADAAPWIRQKTSSGDTIIGARAILNQGLEMSDAVFF 183 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 D Q + + L L D + R + I + Sbjct: 184 ILDQQGNIAERKDAVRAYLRDGYWELQDVKTFR----NGVIQSAANDRVPTNLKPEFVQE 239 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + L + +F + V LI+ + + A Sbjct: 240 RLARPETIPFYDL-PGKIEVARSFGLKANAFAMQFDSLVALPFLLVAMTLIAATVSMRFA 298 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + Q + + V P + + + ++ K Sbjct: 299 RMGQSATMILGGVVAGFLLYVVSVLVKAFGVAGFVPTAVAAWVPVVVAMFFGVTFLLYK 357 >gi|165919041|ref|ZP_02219127.1| putative permease [Coxiella burnetii RSA 334] gi|165917236|gb|EDR35840.1| putative permease [Coxiella burnetii RSA 334] Length = 370 Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 48/342 (14%), Positives = 119/342 (34%), Gaps = 21/342 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + I + L + L ++ I Q + +N ++ ++ +++I +P +L Sbjct: 2 IVFRYLCKEILGTLLATTLILLIIFMTNQFVHYLNDAAAGKITVKAVMEIMSLQVPLLLG 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + L M + E++I+ G SR ++ ++ LA + + + +E Sbjct: 62 YLLPLGLFLGGLLALGRMAVDHEMVILTACGVSRAQIVGMLIVLATFIGVIVAWLMLSVE 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV------ 176 PK + ++ A + + F L + + + ++ + + + Sbjct: 122 PKMQWYRVKILKDAVATASLEKIVPGRFQPLSSNGQVFYAGGVNDHHQKMLNVFLAQSET 181 Query: 177 --DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + A S I+ +G + P +MKF Y ++ S Sbjct: 182 AGGKQRWDLVSADQAGEYSTAKGENFILFKNGFRYVGIPGELKYDVMKFGEYGIRLTSP- 240 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + I + + S L + + + +E R+ L +F L+ Sbjct: 241 AMDITGRVDAMPTSKLWHLHSKDLKAA--------AELQWRIAMPLSVWLFALL---IVP 289 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 ++ K + ++ I G + F ++ ++ Sbjct: 290 LSEANPRKGKFAQMLPAVLIYIG-YANFMFLGRTWIEDGVIS 330 >gi|71064627|ref|YP_263354.1| hypothetical protein Psyc_0046 [Psychrobacter arcticus 273-4] gi|71037612|gb|AAZ17920.1| conserved hypothetical protein [Psychrobacter arcticus 273-4] Length = 402 Score = 72.0 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 40/385 (10%), Positives = 118/385 (30%), Gaps = 30/385 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K Y+ + + + + + + V L ++ + + ++ +K Y P Sbjct: 21 LKVLSRYVKLNALLAIIAAVIGLWALQLVFSYLSELDSL-DDSYTMGEAIKYIFYRSPYF 79 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + L + N+EL+++ G S ++ VL A++ + I Sbjct: 80 LEQFIPTGALLGAVIGLGLLANNSELVVMRAAGISVYRIVSWVLQPALIFVVLALIINQF 139 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF------ 174 + P ++++K +L S ++ +K + ++ L + Sbjct: 140 VLPHSNQLANEINSKGNSSLVTSVRGYWTVQPRFENTKRGTTKPDGSDILYIDYADVKGN 199 Query: 175 ------IVDSRDTQTHKIYYAQSGSIDLDR--------------QAIILNDGEVHRKSPI 214 + +A+ G LN+ + Sbjct: 200 IGQVKRWHLDNNGSLQTAIHAEGGQYIGREPLDTVSSKPSEQYRYEWQLNNMTKLMINQG 259 Query: 215 SKDISIMK-FKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFH 273 + + + +L + + +A D +L+ L + + + ++ F Sbjct: 260 FESSQAISPTDTLSLPFAPESVYLLTHQAEDLSLTQLY-EHRQFMRQQGQRSLSHELAFW 318 Query: 274 KRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP 333 ++L L + +++ + + + F + Sbjct: 319 QKLLSPLSILSLVIVACSFVFGSLRTHSLGLRIVVALLFGLLFSYVQDLVGFVSLATGFS 378 Query: 334 YYIPILYLFLFCISSIFLLMIKKKY 358 + ++ L + + + ++K++ Sbjct: 379 PLL-MVLLPIIASALLGEYLLKRQM 402 >gi|212218293|ref|YP_002305080.1| hypothetical membrane spanning protein [Coxiella burnetii CbuK_Q154] gi|212012555|gb|ACJ19935.1| hypothetical membrane spanning protein [Coxiella burnetii CbuK_Q154] Length = 372 Score = 71.6 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 48/342 (14%), Positives = 119/342 (34%), Gaps = 21/342 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + I + L + L ++ I Q + +N ++ ++ +++I +P +L Sbjct: 4 IVFRYLCKEILGTLLATTLILLIIFMTNQFIHYLNDAAAGKITVKAVMEIMSLQVPLLLG 63 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + L M + E++I+ G SR ++ ++ LA + + + +E Sbjct: 64 YLLPLGLFLGGLLALGRMAVDHEMVILTACGVSRAQIVGMLIVLATFIGVIVAWLMLSVE 123 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV------ 176 PK + ++ A + + F L + + + ++ + + + Sbjct: 124 PKMQWYRVKILKDAVATASLEKIVPGRFQPLSSNGQVFYAGGVNDHHQKMLNVFLAQSET 183 Query: 177 --DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + A S I+ +G + P +MKF Y ++ S Sbjct: 184 AGGKQRWDLVSADQAGEYSTAKGENFILFKNGFRYVGIPGELKYDVMKFGEYGIRLTSP- 242 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + I + + S L + + + +E R+ L +F L+ Sbjct: 243 AMDITGRVDAMPTSKLWHLHSKDLKAA--------AELQWRIAMPLSVWLFALL---IVP 291 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 ++ K + ++ I G + F ++ ++ Sbjct: 292 LSEANPRKGKFAQMLPAVLIYIG-YANFMFLGRTWIEDGVIS 332 >gi|255533443|ref|YP_003093815.1| permease YjgP/YjgQ family protein [Pedobacter heparinus DSM 2366] gi|255346427|gb|ACU05753.1| permease YjgP/YjgQ family protein [Pedobacter heparinus DSM 2366] Length = 480 Score = 71.6 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 39/224 (17%), Positives = 86/224 (38%), Gaps = 2/224 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK L +++ R F ++ ++FI ++ + + ++ + ++L++ Y Sbjct: 1 MKKIHLLLVKAFIRPFFVTFFIVMFILLMLFLFKYVDDLIGKGFEWYVILELMYYASAAN 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + ++ N EL+ I + G S + P+L L I L+I F+ Sbjct: 61 VSMALPLSILLSSIMTFGTLGENYELVAIKSAGVSLQKAMMPLLVLIIFLAISSFLFSEY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + PK L + ++E +F I++ K + ++ Sbjct: 121 MLPKANLKFGSLLWDIRNKKLSFLIKEGVFNNSIPGYSIRVDKKGSDGISLHNVMIYDHT 180 Query: 181 TQT--HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK 222 + KI A+SG + + ++L + R + S Sbjct: 181 SNNGIAKIIIAKSGKMSKNDDYLLLTLHDGVRYEESNGKSSSYN 224 Score = 40.4 bits (92), Expect = 0.48, Method: Composition-based stats. Identities = 15/103 (14%), Positives = 35/103 (33%), Gaps = 4/103 (3%) Query: 246 NLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKI 305 ++ + + R + EF K+ T ++ I A A++R+ Sbjct: 339 SILQTTSGRLQDHADRVRNIIKVEIEFQKKFTLAASCLLLFFIG---APLGAIIRKGGLG 395 Query: 306 HPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 P+ +++ F + + + K P ++L I Sbjct: 396 LPVVMAIVF-FLFYHIIATVSEKSATQGSLTPFFGMWLAFIIL 437 >gi|269213541|ref|ZP_06158032.1| permease, YjgP/YjgQ family [Neisseria cinerea ATCC 14685] gi|269146393|gb|EEZ72811.1| permease, YjgP/YjgQ family [Neisseria cinerea ATCC 14685] Length = 182 Score = 71.6 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 14/184 (7%), Positives = 57/184 (30%), Gaps = 2/184 (1%) Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 D ++ + + L + ++S +++ + + Sbjct: 1 MRNDKNELMQATEAESAVLNNDGSWQLKNIRRSTLGEDKVEVSTAAEETWPIAVKRNLMD 60 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 +++K + ++ L ++ + + Y + ++L + + L++ + Sbjct: 61 VLLVKPDQMSVGELT-TYISHLENNNQNTQIYAIAWWRKLVYPIAAWVMALVAFAFTPQT 119 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 I L + F ++ P ++ L + + + +I++ Sbjct: 120 TRHGNMGLKLFGGICLGLLFHFAGRLFGFTSQLYGVPPFLAG-ALPTIAFALLAVWLIRR 178 Query: 357 KYTK 360 + + Sbjct: 179 QEKR 182 >gi|326626150|gb|EGE32495.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 335 Score = 71.6 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 44/324 (13%), Positives = 115/324 (35%), Gaps = 19/324 (5%) Query: 33 LQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNT 92 ++ + N++L + G +P + ++ P + L + +E+ ++ Sbjct: 1 MRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHAC 60 Query: 93 GTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFR 152 G S+ L+K + LA+ I ++ P ++ A+A+ + L + F + Sbjct: 61 GLSKAVLVKAAMVLALFTGILAAVNVMWAGPWSSKHQDEVLAEAKANPGMAALAQGQFQQ 120 Query: 153 LDDDLYIKISKYNPNNTLQGIFIVDSRDTQT--HKIYYAQSGSI---DLDRQAIILNDGE 207 + + + + +F+ R + A SG + Q + LN G Sbjct: 121 ATNGSSVLFIESVDGSDFHDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNKGT 180 Query: 208 VHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLET 267 + + +D I F++Y + + ++ L N + + Sbjct: 181 RFEGTALLRDFRITDFQNYQAIIGHQAVALDPNDTDQMDMRTLWNTDND----------R 230 Query: 268 YRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH 327 R+E H R+T + L+ + ++ ++ + ++ + F + I Sbjct: 231 ARAELHWRITLVFTVFMMALM---VVPLSVVNPRQGRVLSMLPAMLLYLLFFLIQTSIKS 287 Query: 328 KIEQNPYYIPILYLFLFCISSIFL 351 + P+++++ + + L Sbjct: 288 NGGK-GKLDPVIWMWAVNLIYLAL 310 >gi|215919050|ref|NP_819829.2| putative permease [Coxiella burnetii RSA 493] gi|206583935|gb|AAO90343.2| hypothetical membrane spanning protein [Coxiella burnetii RSA 493] Length = 372 Score = 71.6 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 48/342 (14%), Positives = 119/342 (34%), Gaps = 21/342 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + I + L + L ++ I Q + +N ++ ++ +++I +P +L Sbjct: 4 IVFRYLCKEILGTLLATTLILLIIFMTNQFVHYLNDAAAGKITVKAVMEIMSLQVPLLLG 63 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + L M + E++I+ G SR ++ ++ LA + + + +E Sbjct: 64 YLLPLGLFLGGLLALGRMAVDHEMVILTACGVSRAQIVGMLIVLATFIGVIVAWLMLSVE 123 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV------ 176 PK + ++ A + + F L + + + ++ + + + Sbjct: 124 PKMQWYRVKILKDAVATASLEKIVPGRFQLLSSNGQVFYAGGVNDHHQKMLNVFLAQSET 183 Query: 177 --DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + A S I+ +G + P +MKF Y ++ S Sbjct: 184 AGGKQRWDLVSADQAGEYSTAKGENFILFKNGFRYVGIPGELKYDVMKFGEYGIRLTSP- 242 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + I + + S L + + + +E R+ L +F L+ Sbjct: 243 AMDITERVDAMPTSKLWHLHSKDLKAA--------AELQWRIAMPLSVWLFALL---IVP 291 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 ++ K + ++ I G + F ++ ++ Sbjct: 292 LSEANPRKGKFAQMLPAVLIYIG-YANFMFLGRTWIEDGVIS 332 >gi|321222551|gb|EFX47623.1| putative permease [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] Length = 335 Score = 71.6 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 44/324 (13%), Positives = 115/324 (35%), Gaps = 19/324 (5%) Query: 33 LQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNT 92 ++ + N++L + G +P + ++ P + L + +E+ ++ Sbjct: 1 MRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHAC 60 Query: 93 GTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFR 152 G S+ L+K + LA+ I ++ P ++ A+A+ + L + F + Sbjct: 61 GLSKAVLVKAAMVLALFTGILAAVNVMWAGPWSSKHQDEVLAEAKANPGMAALAQGQFQQ 120 Query: 153 LDDDLYIKISKYNPNNTLQGIFIVDSRDTQT--HKIYYAQSGSI---DLDRQAIILNDGE 207 + + + + +F+ R + A SG + Q + LN G Sbjct: 121 ATNGNSVLFIESVDGSDFHDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNKGT 180 Query: 208 VHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLET 267 + + +D I F++Y + + ++ L N + + Sbjct: 181 RFEGTALLRDFRITDFQNYQAIIGHQAVALDPNDTDQMDMRTLWNTDND----------R 230 Query: 268 YRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH 327 R+E H R+T + L+ + ++ ++ + ++ + F + I Sbjct: 231 ARAELHWRITLVFTVFMMALM---VVPLSVVNPRQGRVLSMLPAMLLYLLFFLIQTSIKS 287 Query: 328 KIEQNPYYIPILYLFLFCISSIFL 351 + P+++++ + + L Sbjct: 288 NGGK-GKLDPVIWMWAVNLIYLAL 310 >gi|310822423|ref|YP_003954781.1| hypothetical protein STAUR_5182 [Stigmatella aurantiaca DW4/3-1] gi|309395495|gb|ADO72954.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 373 Score = 71.6 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 38/365 (10%), Positives = 108/365 (29%), Gaps = 12/365 (3%) Query: 1 MK-SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPT 59 M+ + Y+ R R + ++ + V+ + R + + +L++ Sbjct: 1 MRGTLFRYVARLYARFAVGILAALLTVFLVVDFVDRSRAYTGEGW-VLAVLELYWNKALV 59 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ P + ++++ + E+ + +L PV +A+ + L + Sbjct: 60 TTQLLGPAALLLAAGAAVSTLRKRGEVTALRALTFGPASLYLPVGAVALAACLGLIAFDE 119 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSY-LEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 + + + +++ + + + + + + + I+ Sbjct: 120 RVVAQASRRVDEITTQRFNRWGDWRLYYTPKQWFRRGEHVFFLRSGSAQEGFRDVAILTL 179 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD-ISIMKFKSYTLQTESANSST 237 + L+ L SP + +S Y L + + Sbjct: 180 TADFKLARRLDADTMVPLEGNRWRLTGVVERSFSPDGRTAVSAAPEAEYDLGVPARSFLI 239 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + L L + Y + R + + L+++ A + Sbjct: 240 RPGRPEQMRLPEL-REQISARTEVGLDSRQYELALYNRFAYPMAGLPAALVAVGLALRP- 297 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL----FCISSIFLLM 353 R+ I L I+ + WG + + P L +L + + L + Sbjct: 298 -NRKGHLTVAIVEGLLIAMAM-WGLIVVSKTLVTTERMAPGLAAWLPSGVLVVVATVLWL 355 Query: 354 IKKKY 358 ++ + Sbjct: 356 RREGW 360 >gi|15639869|ref|NP_219319.1| hypothetical protein TP0884 [Treponema pallidum subsp. pallidum str. Nichols] gi|189026107|ref|YP_001933879.1| hypothetical protein TPASS_0884 [Treponema pallidum subsp. pallidum SS14] gi|3323201|gb|AAC26574.1| conserved hypothetical integral membrane protein [Treponema pallidum subsp. pallidum str. Nichols] gi|189018682|gb|ACD71300.1| hypothetical integral membrane protein [Treponema pallidum subsp. pallidum SS14] Length = 362 Score = 71.6 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 61/358 (17%), Positives = 130/358 (36%), Gaps = 15/358 (4%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y+ + + L+ L + +V +L + + S ++++ Y IP L VTP Sbjct: 2 YVCEVVFKHILVGVLCFFLVFFVNNVLLFAQTLLTKHVSAADVVRLLLYSIPAALIYVTP 61 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 F + + L + N ELL + G S LI P+L + + ++F+F+ +++ P Sbjct: 62 FAVLVGSLLGLGRLRNNLELLALQVLGVSPRFLIFPLLSIGLCSALFVFVFSDVVVPASF 121 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 ++Q+ + ++ E+ R + + + + + + Q + + S + Sbjct: 122 IRLRQVYWRVLSSVPSLGF-ESHTTRKHNGVILSVGEVFHSVMYQLLIVDKSDSRSLKVV 180 Query: 187 YYAQSGSIDLDRQAIILNDGEV-------HRKSPISKDISIMKFKSYTLQTESANSSTIV 239 +S Q + +R P D+ Y + T+ + Sbjct: 181 SSRKSVLESSADQTVPFTIRMHDPCMLIVYRTRPRICDLIYGGRADYHVHTQQTQPEYFM 240 Query: 240 L-KANDQNLSFLLNPN--PNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + L P + TY+ EF K+ + + V+F +S + Sbjct: 241 GLGPGGFSTCSLYREIQEKIKAKENPRHIATYQLEFQKKFSHPISVVLFIFLSFGLSTLS 300 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + Q K F+ I +W S ++ +P L L++ + F +I Sbjct: 301 NISSQGKG----FVGGLIVVLGYWIISIGGQELALRLSIVPSLALWIPNAALFFTALI 354 >gi|304321347|ref|YP_003854990.1| putative permease [Parvularcula bermudensis HTCC2503] gi|303300249|gb|ADM09848.1| predicted permease [Parvularcula bermudensis HTCC2503] Length = 364 Score = 71.6 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 39/341 (11%), Positives = 102/341 (29%), Gaps = 11/341 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPT 59 M Y+ + L L I I + +++ + ++ L+++ P Sbjct: 1 MTVTFGYLAKRTLGGVLGLLLVIWLIVVSVDLIEAMRDIARIPGAGPIAALRLTLLRTPQ 60 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ ++PF F T M R +E+ ++ G S LI P + LA+ + + + + Sbjct: 61 LILSLSPFIFLFGTLWAYGQMARMSEIAVLRAAGLSVWRLIFPPVILAVAAGLLIATTLD 120 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD------DLYIKISKYNPNNTLQGI 173 + + T + + +A+ + +L+ R ++ L + L+ + Sbjct: 121 PLAARLAETAQTVKNEARSGEEAAAKRPHLWLRQNEIGSDGIALLHAERYRENDPVLEEV 180 Query: 174 FIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESA 233 + ++ + ++ + + I + Sbjct: 181 TVWRRTQDGAFIERLDAPRALIDAQVLRLMQARRSTSIATTAPQIEAEIEVPVAIDLRLL 240 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + A+ ++ L +R +H + L +++ A Sbjct: 241 DQD--RQTADTLSVWAL-PETIRLMGDAGMTTTKFRLRYHALWSLPLKLAAMVILACAFA 297 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY 334 R + + + F +F E Sbjct: 298 LGMNA-RGGGTALLMGMGILAGFLLFILSELSAAIAEAAIV 337 >gi|205356326|ref|ZP_03223091.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni CG8421] gi|205345711|gb|EDZ32349.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni CG8421] Length = 341 Score = 71.6 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 54/324 (16%), Positives = 115/324 (35%), Gaps = 14/324 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+L + L + I ++ +Q L SS S LLK+ G+++P + Sbjct: 1 MKLSLRYVLNQFLSTNLSIFFVLFAIVSMVFFIQLAKLTSSIEISFLDLLKLYGFMLPRI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P F + T L +++ E +++ G S + L K L +A L+S F+ + + Sbjct: 61 LIFTLPISFFISLTLALFRLSKENESIVLFTLGFSPMILAKFFLKIASLISAFMLVVALV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + F+Y + D + + + ++ + Sbjct: 121 MIPIVFELQDNFVNYKSTQVKFNYKTGEFGQKFLDWMIFIEKQDSDKYENIIMYRPKHKA 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKS-PISKDISIMKFKSYTLQTESANSSTIV 239 ++ A+ + + + + + + I +F + + T+ + Sbjct: 181 DDKEQLIIAKEAHVQRKDDSFAFSLNQGKMYNFEQGQSIFSGEFDTLVVNTQFNTDNLQT 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 K + N+ N P+ + +T LFP+ L ++ Sbjct: 241 KKFYE---------YWNDLNENPQRAREFVI----YITIALFPLASTLFALCFGLVTYRY 287 Query: 300 RQRKKIHPIFISLSISFGVFWGFS 323 + +F ++I FG+ FS Sbjct: 288 EKGYVYLGMFGVIAIYFGLLSSFS 311 >gi|332284928|ref|YP_004416839.1| hypothetical protein PT7_1675 [Pusillimonas sp. T7-7] gi|330428881|gb|AEC20215.1| hypothetical protein PT7_1675 [Pusillimonas sp. T7-7] Length = 371 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 54/362 (14%), Positives = 121/362 (33%), Gaps = 8/362 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ ++ I + ++ + + +++ + ++ T N++ ++ + T Sbjct: 1 MSLFKRSVVSEIMSHAGVVFSTLLVVWLSVLLVRLLGEAANGTIGANVVFGLATFSSITA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP++ + +T R +E+++ +G S I+PVL A+ ++I + + + Sbjct: 61 LPVILSVSLFIAVLTTVTRNFRESEMVVWFASGLSLKDWIRPVLRCAVPVAIIIAVLTLV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFR-LDDDLYIKISKYNPNNTLQGIFIVDSR 179 P I + + + S + F D + N G I Sbjct: 121 ASPWAYRQISEYRQRFEQRSDLSKVTAGQFIETEDGARVFFAEEPNEPGEEMGNVIARVV 180 Query: 180 DTQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + A+S I + ++L DG + P D +M+F SY + ES S Sbjct: 181 TPEWLSVVTAESARIQTEENGDRFLVLTDGHRYDLKPDMPDFRLMEFDSYGFRLESNASE 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + S + P + + + + L + A Sbjct: 241 SSAEAVRRMAESQ-IKARPTLKLFTDDNDRALSQIMWRVALPLAALNLALLAIPLGAVNP 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 L R + + L + +I + L+L + + M+ + Sbjct: 300 RLGRSGDFLIAGLVGLLYMNLINLSRGWIGS---GQLNFGIGLWLVHAIFTGLMFYMMWR 356 Query: 357 KY 358 K Sbjct: 357 KL 358 >gi|153209375|ref|ZP_01947370.1| putative permease [Coxiella burnetii 'MSU Goat Q177'] gi|120575375|gb|EAX31999.1| putative permease [Coxiella burnetii 'MSU Goat Q177'] Length = 370 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 48/342 (14%), Positives = 119/342 (34%), Gaps = 21/342 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + I + L + L ++ I Q + +N ++ ++ +++I +P +L Sbjct: 2 IVFRYLCKEILGTLLATTLILLIIFMTNQFIHYLNDAAAGKITVKAVMEIMSLQVPLLLG 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + L M + E++I+ G SR ++ ++ LA + + + +E Sbjct: 62 YLLPLGLFLGGLLALGRMAVDHEMVILTACGVSRAQIVGMLIVLATFIGVIVAWLMLSVE 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV------ 176 PK + ++ A + + F L + + + ++ + + + Sbjct: 122 PKMQWYRVKILKDAVATASLEKIVPGRFQPLSSNGQVFYAGGVNDHHQKMLNVFLAQSET 181 Query: 177 --DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + A S I+ +G + P +MKF Y ++ S Sbjct: 182 AGGKQRWDLVSADQAGEYSTAKGENFILFKNGFRYVGIPGELKYDVMKFGEYGIRLTSP- 240 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + I + + S L + + + +E R+ L +F L+ Sbjct: 241 AMDITGRVDAMPTSKLWHLHSKDLKAA--------AELQWRIAMPLSVWLFALL---IVP 289 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 ++ K + ++ I G + F ++ ++ Sbjct: 290 LSEANPRKGKFAQMLPAVLIYIG-YANFMFLGRTWIEDGVIS 330 >gi|289678194|ref|ZP_06499084.1| permease YjgP/YjgQ [Pseudomonas syringae pv. syringae FF5] Length = 284 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 28/253 (11%), Positives = 68/253 (26%), Gaps = 18/253 (7%) Query: 108 ILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN 167 L + F L + +L S+ Sbjct: 24 WLSFSLAPQGATQFSLLINQQDAMTEFDTLVPGRFQALRDGTRITYTKELSEDRSQLAGV 83 Query: 168 NTLQGIFIVDSRDTQTHKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFK 224 + D + A+ G + +IL +G + +P + D ++K+ Sbjct: 84 FISEKRMSSDKSKDNGITVLVAEKGHQEVRPNGSRFLILENGYRYDGNPGAADYRVIKYD 143 Query: 225 SYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVI 284 +Y S + S L+ +E R++ L I Sbjct: 144 TYGAMLPKPEISEEITDREAIPTSELI----------GNPAPRSVAELQWRISLPLSVFI 193 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLF 342 L++I + ++ + + ++ + + + + P + + ++ Sbjct: 194 VTLMAIPL---SRVNPRQGRYLKLLPAILLYMSYLAILISVRSSLEKGKLPLSLGMWWVH 250 Query: 343 LFCISSIFLLMIK 355 +S LL Sbjct: 251 AIYLSIGLLLFYW 263 >gi|134302362|ref|YP_001122331.1| YjgP/YjgQ permease [Francisella tularensis subsp. tularensis WY96-3418] gi|134050139|gb|ABO47210.1| putative permease YjgP/YjgQ family [Francisella tularensis subsp. tularensis WY96-3418] Length = 351 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 46/357 (12%), Positives = 124/357 (34%), Gaps = 8/357 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI R + SFL+ + + ++ L +++ +++ + +++ + +P + Sbjct: 1 MNRIDRYIFRTVFSSFLIVSIIFCILFFIFTYLAQVSNNTANVSNFELIIN-TLIQLPGI 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P C + L+ + N+E++++ + G S + K V+ + ++ S+ + Sbjct: 60 LYTLLPACAMVGALMGLSLLANNSEIIVLRSFGRSTAQIAKGVILVGLIGSVTTMVFGGY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + + + + + + + +Q + + R Sbjct: 120 IAPILQRQVDTNMVTYNTHDLWFKTPDGFMNIANIEPTNGKAYGIRKFMVQDNKVREIRY 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ S ++ R+ I S K I I+ + + + S + Sbjct: 180 AESATYINDASANVFNIRKIIF-------PASDGQKHIDIVTNMTNAVWSNPLPISVAKV 232 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + N + + + ++ +F + + Q L +I L+++ + Sbjct: 233 ITINDNNYLNFSQLTSYMLSNSQAKDSISLKFWQEVFQPLSLMILILLAVPLSIGSTRSS 292 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + +F + I I P + + + + L IK K Sbjct: 293 TLILKLLLGAFFGFAFFIINQIFGPIALILHLPPILGAAGPTVIALILLIYLFIKSK 349 >gi|21230125|ref|NP_636042.1| hypothetical protein XCC0650 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769884|ref|YP_244646.1| hypothetical protein XC_3584 [Xanthomonas campestris pv. campestris str. 8004] gi|21111655|gb|AAM39966.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575216|gb|AAY50626.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] Length = 360 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 52/365 (14%), Positives = 131/365 (35%), Gaps = 15/365 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L +SFL + + ++ ++ ++ + ++ +LL G Sbjct: 1 MPKLDRYLLSDFTQSFLATLIVLLVVSVGGVLVDILGNIADGRIPARLLLSQVGLQFVAY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP++ P + L + R++E+ +I G +++P+L+L + + + + Sbjct: 61 LPIILPLALMLGLLLALARLYRDSEMAVITAIGIGPRRMLRPILWLVVPVVVVIGACSLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P T + + A ++ + LE F L + ++ +P+ G + + Sbjct: 121 LGPWASRTAELMLEDANRSVVMAGLESGKFTPLSGGGVVYLTTISPDGKGLGKVFMQRQK 180 Query: 181 TQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISK--DISIMKFKSYTLQTESANS 235 + A+ G++ + + L DG ++ D +M F S + Sbjct: 181 DDRIDVVTAERGAMFFEGKTDRYLRLEDGHRIEGPAGAQGLDYRLMTFASNDVALPDRTK 240 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + + L+ + R+E H+RL L + F L+++ + Sbjct: 241 AHDANDPEVMSTFKLI----------GDARPIARAELHRRLAPPLLALAFALLTLPLSRS 290 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 ++ +I F++ + + + I + SI+ Sbjct: 291 APRQQRYGRIMLAFLAYLVGTNLMIVGTQWIANGKVPGALGLWWLTLPLLAVSIWAYARD 350 Query: 356 KKYTK 360 + ++ Sbjct: 351 GRLSR 355 >gi|330874293|gb|EGH08442.1| hypothetical protein Pgy4_05807 [Pseudomonas syringae pv. glycinea str. race 4] Length = 213 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 30/214 (14%), Positives = 67/214 (31%), Gaps = 3/214 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + + L I+ + + + + + S T +L L P Sbjct: 1 MVKLDRYIGKSVLLAILAVLGIILGLVSLFAFIDEMGDI-SDTYTLADALSYVMLTAPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ ++EL I+ G S ++ V+ +LL + + Sbjct: 60 VYDTLPMAALIGCLIGLGTLASSSELTIMRAAGVSIGRIVWAVMKPMLLLMVAGVLVGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + AQ + L+ R ++ + L Sbjct: 120 VAPYAENQAQAARSLAQGSGDAQSARHGLWHRQGEEFIHINTVQPNGLMLGVTRYRFDDQ 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI 214 +A+ + D L D + Sbjct: 180 RHMLTSSFAKEANFKTD--YWELKDVSTTHFNDG 211 >gi|33602710|ref|NP_890270.1| putative integral membrane protein [Bordetella bronchiseptica RB50] gi|33577152|emb|CAE35709.1| putative integral membrane protein [Bordetella bronchiseptica RB50] Length = 370 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 36/362 (9%), Positives = 124/362 (34%), Gaps = 8/362 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ ++ I + +V + + +++ + + + +++L ++ + T Sbjct: 1 MSLFKRSVVSEITSHAGVVFSTLVVVWLSVLLVRLLGEAAGGSIGADVVLGLAAFSTITA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP + + +T R +E+++ +G S ++PV +A+ +++ + + Sbjct: 61 LPTILAVSLFIAVLTTVTRNYRESEMVVWFASGLSLADWLRPVARVAVPIAMLVAALTLV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P I + + + S + F + ++ + + Sbjct: 121 ASPWAYRQIGEYRERFEQRSDLSKVTAGQFAESGRGDRVFFAEDPVRPGDELGAVFARSI 180 Query: 181 TQTHKIYYAQSGS----IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 S + + + ++L +G + P + +I ++ F Y ++ ES Sbjct: 181 DPEWLSVLTASNARSETLPNGDRFLVLGEGHRYDLKPGTPEIRLVNFDQYGVRLESKAGE 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + +A + + + ++ S+ R+ L + L++I Sbjct: 241 DPMAEARAAAER--SSKARSTMQLVQDNTDSSWSQIMWRVAMPLAALNLALLAIPLGAVN 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + + + + + I + + + ++ ++ + ++ + Sbjct: 299 PRLGRSGDLLIAGLVGLLYMNMINLSRAWISSGKIS--FSIGVWAVHAVVALLAAYLLMR 356 Query: 357 KY 358 + Sbjct: 357 RL 358 >gi|291060243|gb|ADD72978.1| putative permease, YjgP/YjgQ family [Treponema pallidum subsp. pallidum str. Chicago] Length = 365 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 61/361 (16%), Positives = 131/361 (36%), Gaps = 15/361 (4%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 +Y+ + + L+ L + +V +L + + S ++++ Y IP L Sbjct: 2 LFVYVCEVVFKHILVGVLCFFLVFFVNNVLLFAQTLLTKHVSAADVVRLLLYSIPAALIY 61 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 VTPF + + L + N ELL + G S LI P+L + + ++F+F+ +++ P Sbjct: 62 VTPFAVLVGSLLGLGRLRNNLELLALQVLGVSPRFLIFPLLSIGLCSALFVFVFSDVVVP 121 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 ++Q+ + ++ E+ R + + + + + + Q + + S Sbjct: 122 ASFIRLRQVYWRVLSSVPSLGF-ESHTTRKHNGVILSVGEVFHSVMYQLLIVDKSDSRSL 180 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEV-------HRKSPISKDISIMKFKSYTLQTESANSS 236 + +S Q + +R P D+ Y + T+ Sbjct: 181 KVVSSRKSVLESSADQTVPFTIRMHDPCMLIVYRTRPRICDLIYGGRADYHVHTQQTQPE 240 Query: 237 TIVL-KANDQNLSFLLNPN--PNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + + L P + TY+ EF K+ + + V+F +S + Sbjct: 241 YFMGLGPGGFSTCSLYREIQEKIKAKENPRHIATYQLEFQKKFSHPISVVLFIFLSFGLS 300 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + Q K F+ I +W S ++ +P L L++ + F + Sbjct: 301 TLSNISSQGKG----FVGGLIVVLGYWIISIGGQELALRLSIVPSLALWIPNAALFFTAL 356 Query: 354 I 354 I Sbjct: 357 I 357 >gi|326316899|ref|YP_004234571.1| permease YjgP/YjgQ family protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373735|gb|ADX46004.1| permease YjgP/YjgQ family protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 365 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 47/334 (14%), Positives = 124/334 (37%), Gaps = 17/334 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ I + + RSF + + +V + + +++ + S + + + ++ + G+ + LP Sbjct: 2 LFDSSIRKELARSFGATLVVLVTVVMTMMLIRTLGQASRGSVNPSDVMLVMGFTVLGQLP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + + L M R +E++I +G + L+ P+L A + + + +I Sbjct: 62 TILTLSLFVAVVGALARMYRESEMVIWFASGRGMLHLLPPLLRFAWPVILAIATLALLIW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD-LYIKISKYNPNNTLQGIFIVDSRDT 181 P I++L + + + F + I + P+N + S + Sbjct: 122 PWANQQIQELKVQYEQRSDVDRIAPGEFQESANGARVFFIDRETPDNQQATNVFIASSEH 181 Query: 182 QTHKIYYAQSGSIDLDRQAI--ILNDGEVHRKSPISKDISIMKFKSYTLQTE-SANSSTI 238 + A+S ++ +L+DG+ + + + +F Y + +A+SS+ Sbjct: 182 GRETVTSARSARLETQGSQRMALLSDGQRLETTLDKPGLKVSEFTEYGTRVGGAASSSSD 241 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 ++ + L +R+E R L + F ++ + A + Sbjct: 242 DAAVKTRSTAQLF----------ASSDPVFRAELGWRFGLALAALNFVVLGLAVA---SA 288 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN 332 + + + +L + ++ + + Sbjct: 289 NPRAARSTSLVFALFAFVVYYNLMTFGQNWVGAG 322 >gi|110638188|ref|YP_678397.1| permease [Cytophaga hutchinsonii ATCC 33406] gi|110280869|gb|ABG59055.1| conserved hypothetical protein; possible permease [Cytophaga hutchinsonii ATCC 33406] Length = 483 Score = 71.2 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 40/204 (19%), Positives = 81/204 (39%), Gaps = 2/204 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +L +L+ F+++ + FI + IL+ I+ + S ++ Y +L Sbjct: 5 KRLDLLVLKAFFGPFILTVFVVTFIFLMQTILKYIDELVGKGLSYLDYAELMMYFSMNIL 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P+ P + + ++ + EL I ++G S I ++ P+ + ++ L+ N + Sbjct: 65 PVALPLAILLSSLMTFGNLGQFNELTAIKSSGISLIRVMVPIAIWVLGCTVGLYFFNNYV 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 PK L + L+ +F+ IKI + N++ I+ Sbjct: 125 VPKANLKAFSLLYDLRQKKPSLDLKPGVFYNGIPGYSIKIVQKFDNDSSIKGVIIYDHTQ 184 Query: 182 --QTHKIYYAQSGSIDLDRQAIIL 203 + A SGS+ L Q+ L Sbjct: 185 SRGNTDVIIADSGSMYLFNQSQYL 208 Score = 42.3 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 19/121 (15%), Positives = 46/121 (38%), Gaps = 8/121 (6%) Query: 245 QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKK 304 +++ L N + + + +++ TQ + + LI A A++++ Sbjct: 346 RSIKSYLQGNVERDERFIKEIHEFEVTKYQKFTQAVACFVLFLIG---APLGAIIKKGGL 402 Query: 305 IHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF----LFCISSIFLLMIKKKYTK 360 P+ I + I F ++ FS K + Y ++ + +F + K ++ Sbjct: 403 GIPVLICI-IFFIFYYVFSITGEKWTKEGVYPADFAMWFGNGILFCVGLFFMRQAKNDSR 461 Query: 361 I 361 I Sbjct: 462 I 462 >gi|323144743|ref|ZP_08079320.1| permease, YjgP/YjgQ family [Succinatimonas hippei YIT 12066] gi|322415494|gb|EFY06251.1| permease, YjgP/YjgQ family [Succinatimonas hippei YIT 12066] Length = 336 Score = 71.2 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 43/338 (12%), Positives = 110/338 (32%), Gaps = 18/338 (5%) Query: 32 ILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDN 91 +++ I+ + T ++I+ ++ Y +P + ++ P + L + ++E++++ + Sbjct: 1 MIRLISRAAVGTVPVDIITNLAAYAVPEIAMIMLPLTLFLACLITLGRICSDSEMVVMRS 60 Query: 92 TGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFF 151 G S ++ + LA SI + + P + + L + + F +E F Sbjct: 61 IGFSPANVMTIAMILAFFTSIVTAFNCIYLVPWASNAKETLMKQTENNPQFLPIESGKFS 120 Query: 152 RLDDDLYI--KISKYNPNNTLQGIFIVDSRDTQT--HKIYYAQSGSIDLDRQ---AIILN 204 + + + + V + + A +G + D + L+ Sbjct: 121 SMGGYNIYIENVEEKSDGEKNIANVFVMESPFANVGNSMTIADNGYLVHDENGVLWLELD 180 Query: 205 DGEVHRKSPISKDISIMKFKSYTLQTESANSS-TIVLKANDQNLSFLLNPNPNNPNYRPE 263 G + F + +NS + ++ LLN Sbjct: 181 KGSRFEVLTKDGTSNKAIFDKFRAPVAGSNSELQEDDSISSRDTFELLN----------S 230 Query: 264 LLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFS 323 + E RL+ I I+I + + ++ P + + + Sbjct: 231 GEKRGIVEAQWRLSPIFAVFILTFIAIPLSMVNPRQGRFARLMPAILIYASYYMFLLSCR 290 Query: 324 YIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTKI 361 +I+ Y + +F L + + + K+ Sbjct: 291 NMINSGSWPLYPGLFIVPVVFLFFVGIPLNLPRNFWKL 328 >gi|320537762|ref|ZP_08037685.1| hypothetical protein HMPREF9554_02439 [Treponema phagedenis F0421] gi|320145385|gb|EFW37078.1| hypothetical protein HMPREF9554_02439 [Treponema phagedenis F0421] Length = 377 Score = 71.2 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 54/368 (14%), Positives = 117/368 (31%), Gaps = 11/368 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K LY+ + + F + LF FI +V IL + S ++ + Y +P ++ Sbjct: 12 KILFLYLSKELLLYFFVCFLFFFFIFFVNNILLMAEDILSKHAPFKDVMLLMFYSLPMII 71 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PF + T + + E L ++ G S L+ PVL + + +SI F + +++ Sbjct: 72 ANSAPFAALVGTLMCIGRFFSDLEFLAMNALGVSMKFLLVPVLAVGLFISIVSFFTNDVL 131 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI-------KISKYNPNNTLQGIF 174 P ++++ + LE + + + I I + + + Sbjct: 132 LPASFIQLRKVYWDISTSTPALELESYSIKKNQNAVVISGLIKDGIIDELLIIDKGENKE 191 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 ++ I + I K L Sbjct: 192 SRILGGKKSELKKSTDPAVIMTLDMNEPQMLIIDGKDEKKYDSIVGKKIAYNVLAKNINP 251 Query: 235 SSTIVLKANDQNLSFLLNPN--PNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 L +D L N LL Y EFHK+ + + F ++ Sbjct: 252 VYFNALGPSDMTSYDLYKDIQTRKKNNEDKRLLNIYNMEFHKKFSIPFGALFFVFLAFGI 311 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 + + Q + + V G I + + + +++L + + + Sbjct: 312 SSVGKVHNQSVGFILGLLIAVAYWAVLMGGQEISLTFDVSGAF--MMWLPNILLLIVGGI 369 Query: 353 MIKKKYTK 360 ++ ++ + Sbjct: 370 LLGRRLFR 377 >gi|329114704|ref|ZP_08243462.1| Permease YjgP/YjgQ Family Protein [Acetobacter pomorum DM001] gi|326695970|gb|EGE47653.1| Permease YjgP/YjgQ Family Protein [Acetobacter pomorum DM001] Length = 358 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 30/353 (8%), Positives = 100/353 (28%), Gaps = 5/353 (1%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 Y+ + + +V + ++ +L++ + + +L + P +L Sbjct: 6 LLRYLSMALLTRVIFCGAVLVGLLEILALLEQTTPILQRHLGVQGILSFAAMRAPFLLAG 65 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + +LT M +E+ I+ G S L K ++ +++ + ++ + P Sbjct: 66 ALPLSVLIGALLMLTQMTLASEIAILRACGLSTFGLYKYLIPATLVIGFAGVVLDDQVTP 125 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + + + + N + I Sbjct: 126 RSEQALAAWWNRTDPHPENGHAFWFHDGNRIAHIGYTSDGGNMLAKVD---IYIRDTNGR 182 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKS-PISKDISIMKFKSYTLQTESANSSTIVLKA 242 + + + +L++ + + + ++ S+ + + Sbjct: 183 LQQILHAKSADYTHTRGWLLHNVDSITVEGEKTTRLPSVQNMSWDTSLHPWEFIRLSAEN 242 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + + +L + +R + ++ LI++ R Sbjct: 243 PPLSSTTILGMLQGRL-PSHTSPGFLEAGLLERFLRPASLLVLLLIALPTIYIPPRTGTR 301 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + + F + G + P I + + ++++ Sbjct: 302 SWVPVWCLGCGLLFIIVQGMLRAMGNAGLLPPAIATIPALIIFTLGAITVLLR 354 >gi|254468135|ref|ZP_05081541.1| permease YjgP/YjgQ [beta proteobacterium KB13] gi|207086945|gb|EDZ64228.1| permease YjgP/YjgQ [beta proteobacterium KB13] Length = 368 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 44/347 (12%), Positives = 117/347 (33%), Gaps = 14/347 (4%) Query: 11 CIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFA 70 + + L + L + I + + L S + +L I + + LP++ Sbjct: 10 ELFYNSLSTILILSGIVVAQRGVVVFRLASKGIIPNDSILTILVFSLIKYLPILLTLTLF 69 Query: 71 METTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIK 130 + L+ R++E++I ++G + I+P+LF ++ + + + + P + Sbjct: 70 LTILLTLSRWFRDSEMMIWFSSGLGLTSFIRPILFFSLPIILLIGFLSLYLSPWATQKSE 129 Query: 131 QLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQ 190 + A + + + F + + + + + + Sbjct: 130 EYKAGLKNRDELATISPGSFKESKSKDRVFYVEGFGDLGSKVKNVFVQSEQNGKLGIIVS 189 Query: 191 S-----GSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQ 245 + + + I+L G+ + + + + + +KF Y E I + + Sbjct: 190 NEGSRVSTSTDKDEYIVLKKGKRYEVNHENNNFTEIKFNDYGFLVERKLPPIIDVNQVEA 249 Query: 246 NLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKI 305 + LL +EF R++ L ++ +++I + + I Sbjct: 250 MPTALLLLT---------NTNREIAEFVWRVSLPLSGIVLIILAIPLSFINPRSGRSANI 300 Query: 306 HPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 + +I + I+ + NPY + L + +L+ Sbjct: 301 IIAIMIFAIYNNLMGVTQSYINLGKLNPYVGGAIVHVLIISIASYLM 347 >gi|330975728|gb|EGH75794.1| permease YjgP/YjgQ [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 243 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 34/242 (14%), Positives = 81/242 (33%), Gaps = 11/242 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + + ++ + ++ + +S +L I G+ +P L Sbjct: 2 IVFRYLSREVLLTLSAVSAVLLVFIMSGRFIKYLAQAASGALDPGVLFLIMGFRLPGFLQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ TG S+ L+ + A L+ + + + Sbjct: 62 VILPLGLFLGILMAYGRLYLESEMTVLAATGMSQQRLLAITMGPATLVGLLVAWLSFSLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFF--RLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + L + F L F R + + L G+FI + R Sbjct: 122 PQGATQFSLLINQQDAMTEFDTLVPGRFQALRDGTRITYTKELSEDRSQLAGVFISEKRM 181 Query: 181 TQTHKIYYAQSGSIDLDRQ---------AIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 + + + +IL +G + +P + D ++K+ +Y Sbjct: 182 SSDKSKDNGITVLVAEKGHQEVRPNGSRFLILENGYRYDGNPGAADYRVIKYDTYGAMLP 241 Query: 232 SA 233 Sbjct: 242 KP 243 >gi|161829745|ref|YP_001596892.1| putative permease [Coxiella burnetii RSA 331] gi|161761612|gb|ABX77254.1| putative permease [Coxiella burnetii RSA 331] Length = 370 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 48/342 (14%), Positives = 118/342 (34%), Gaps = 21/342 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + I + L + L ++ I Q + +N ++ ++ +++I P +L Sbjct: 2 IVFRYLCKEILGTLLATTLILLIIFMTNQFVHYLNDAAAGKITVKAVMEIMSLQAPLLLG 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + L M + E++I+ G SR ++ ++ LA + + + +E Sbjct: 62 YLLPLGLFLGGLLALGRMAVDHEMVILTACGVSRAQIVGMLIVLATFIGVIVAWLMLSVE 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV------ 176 PK + ++ A + + F L + + + ++ + + + Sbjct: 122 PKMQWYRVKILKDAVATASLEKIVPGRFQLLSSNGQVFYAGGVNDHHQKMLNVFLAQSET 181 Query: 177 --DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + A S I+ +G + P +MKF Y ++ S Sbjct: 182 AGGKQRWDLVSADQAGEYSTAKGENFILFKNGFRYVGIPGELKYDVMKFGEYGIRLTSP- 240 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + I + + S L + + + +E R+ L +F L+ Sbjct: 241 AMDITERVDAMPTSKLWHLHSKDLKAA--------AELQWRIAMPLSVWLFALL---IVP 289 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 ++ K + ++ I G + F ++ ++ Sbjct: 290 LSEANPRKGKFAQMLPAVLIYIG-YANFMFLGRTWIEDGVIS 330 >gi|326335584|ref|ZP_08201771.1| YjgP/YjgQ family permease [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692350|gb|EGD34302.1| YjgP/YjgQ family permease [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 481 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 48/299 (16%), Positives = 109/299 (36%), Gaps = 20/299 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL +F+ S L I+ I I I+ ++ S+ I++K ++P + Sbjct: 1 MKILDRYILSRFIFNFVSSFLIIILIFIFQTIWLYIDELAGKGLSIFIIIKFVALMLPNL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P++ P + + L + + EL + +G S + + ++ +LLSI +F + N Sbjct: 61 IPLILPLTVVLSSIMTLGAFGESYELAAMKASGVSLLKGTRTLILFMLLLSIGVFFTFNN 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 ++P L + + + +F + D K N ++ Sbjct: 121 LQPWSNRKAVALRDSIKNKQPSLAISQGIFNNVQDFSIKVEKKTGENGEFLHDIVIHKLG 180 Query: 181 TQ--THKIYYAQSGSIDLDRQAI-----ILNDGEVHRKSPISKDISIMKF-------KSY 226 + + A+ G + ++ IL DG + + F + Sbjct: 181 VDGLSRTVIKAKEGELSGHKKGSNVLQLILKDGTYYEDVKSANSDITFPFVKAKFQVHTL 240 Query: 227 TLQTESANSSTIVLKAND------QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQW 279 + S N+ ++ + N++ L + + + + + F++R Sbjct: 241 NIDISSLNTEVSYDESGERDYYKTMNINQLSHALDSIVTNYKQEAKDFGDNFYRRTGMP 299 Score = 47.7 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 48/110 (43%), Gaps = 6/110 (5%) Query: 246 NLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKI 305 +L L+ N +N Y+ +L+ YR F ++ + + ++ A A++R+ Sbjct: 347 SLINNLDNNKDNVEYQQKLINIYRLTFSDKIALAITCFVLFFVA---APLGAIIRKGGIG 403 Query: 306 HPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--FCISSIFLLM 353 P+ +++ + F ++ + + N P + ++ F + + + + Sbjct: 404 MPLVVAIGL-FLTYYFSGLLTKNMATNGNINPYIAPWIPTFFLLPLGIYL 452 >gi|33593405|ref|NP_881049.1| putative integral membrane protein [Bordetella pertussis Tohama I] gi|33572761|emb|CAE42691.1| putative integral membrane protein [Bordetella pertussis Tohama I] gi|332382814|gb|AEE67661.1| putative integral membrane protein [Bordetella pertussis CS] Length = 370 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 36/362 (9%), Positives = 123/362 (33%), Gaps = 8/362 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ ++ I + +V + + +++ + + + +++L ++ + T Sbjct: 1 MSLFKRSVVSEITSHAGVVFSTLVVVWLSVLLVRLLGEAAGGSIGADVVLGLAAFSTITA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP + + +T R +E+++ +G S ++PV +A+ +++ + + Sbjct: 61 LPTILAVSLFIAVLTTVTRNYRESEMVVWFASGLSLADWLRPVARVAVPIAMLVAALTLV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P I + + S + F + ++ + + Sbjct: 121 ASPWAYRQIGEYRELFEQRSDLSKVTAGQFAESGRGDRVFFAEDPVRPGDELGAVFARSI 180 Query: 181 TQTHKIYYAQSGS----IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 S + + + ++L +G + P + +I ++ F Y ++ ES Sbjct: 181 DPEWLSVLTASNARSETLPNGDRFLVLGEGHRYDLKPGTPEIRLVNFDQYGVRLESKAGE 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + +A + + + ++ S+ R+ L + L++I Sbjct: 241 DPMAEARAAAER--SSKARSTMQLVQDNTDSSWSQIMWRVAMPLAALNLALLAIPLGAVN 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + + + + + I + + + ++ ++ + ++ + Sbjct: 299 PRLGRSGDLLIAGLVGLLYMNMINLSRAWISSGKIS--FSIGVWAVHAVVALLAAYLLMR 356 Query: 357 KY 358 + Sbjct: 357 RL 358 >gi|149173512|ref|ZP_01852142.1| hypothetical protein PM8797T_22248 [Planctomyces maris DSM 8797] gi|148847694|gb|EDL62027.1| hypothetical protein PM8797T_22248 [Planctomyces maris DSM 8797] Length = 388 Score = 70.8 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 53/380 (13%), Positives = 123/380 (32%), Gaps = 33/380 (8%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLV----------------SSSTES 45 +F+ Y+L+ F++ + + V I+ S Sbjct: 6 TTFDRYLLKRYFHVFVIGFIATYGLYVVFDGFTNIDGFQAGAEKVSSNDLNGLEVDQNAS 65 Query: 46 ---LNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKP 102 L I+L+ Y M++P + V + M R+ EL + + G L P Sbjct: 66 TSLLWIMLEFYFYQSSLFFDMISPILSVLAGVVVFSLMVRHGELNPVLSAGIPTYRLAIP 125 Query: 103 VLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS 162 + I+++ + +++ +I P ++ + E ++ + Sbjct: 126 LAMATIIVNCVMCLNQEVIIPSIADKLQAERGDMAS---SAQFVEPVYDFSTRIMINGQE 182 Query: 163 KYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK 222 + ++ V S+ + +I + + +P +++ I + Sbjct: 183 VFLTEQKMKNAEFVLSKPMVHDFVTVKSDTAIYQTPTQTRPGGWLLKQATPSYQELEIAE 242 Query: 223 FKSYTLQTESANSSTI------VLKANDQNLSFLLN-----PNPNNPNYRPELLETYRSE 271 F +Q + + ++N S L++ NNP++ + + + Sbjct: 243 FAREIIQPGPEPNEIFIVTDVGCDQLCNRNFSSLISTSDLIARINNPSFSDLSIRKQKLD 302 Query: 272 FHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ 331 H RLT+ + +I LISI ++ I + FG+ F Y+ Sbjct: 303 LHSRLTRPIMNLIAVLISIPFVLRKESRSLILNIAICACVMGGLFGISQCFLYMGSTKLI 362 Query: 332 NPYYIPILYLFLFCISSIFL 351 +P + + + Sbjct: 363 SPDQAAWFPVITNGTLAAWF 382 >gi|283957186|ref|ZP_06374650.1| hypothetical protein C1336_000800059 [Campylobacter jejuni subsp. jejuni 1336] gi|283791362|gb|EFC30167.1| hypothetical protein C1336_000800059 [Campylobacter jejuni subsp. jejuni 1336] Length = 341 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 54/324 (16%), Positives = 114/324 (35%), Gaps = 14/324 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+L + L + I ++ +Q L SS S LLK+ G+++P + Sbjct: 1 MKLSLRYVLNQFLSTNLSIFFVLFAIVSMVFFIQLAKLTSSIEISFLDLLKLYGFMLPRI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P F + T L +++ E +++ G S + L K L +A L+S F+ + + Sbjct: 61 LIFTLPISFFISLTLALFRLSKENESIVLFTLGFSPMILAKFFLKIASLISAFMLVVALV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + F+Y + D + + + ++ + Sbjct: 121 MIPIVFELQDNFVNYKSTQVKFNYKTGEFGQKFLDWMIFIEKQDSDKYENIIMYRPKHKT 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKS-PISKDISIMKFKSYTLQTESANSSTIV 239 ++ A+ + + + + + + I +F + + T+ + Sbjct: 181 DDKEQLIIAKEAHVQRKDDSFAFSLNQGKMYNFEQGQSIFSGEFDTLVVNTQFNTDNLQT 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 K + N+ N P+ + T LFP+ L ++ Sbjct: 241 KKFYE---------YWNDLNENPQRAREFVI----YTTIALFPLASTLFALCFGLVTYRY 287 Query: 300 RQRKKIHPIFISLSISFGVFWGFS 323 + +F ++I FG+ FS Sbjct: 288 EKGYVYLGMFGVIAIYFGLLSSFS 311 >gi|301346207|ref|ZP_07226948.1| permease YjgP/YjgQ family protein [Acinetobacter baumannii AB056] Length = 201 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 26/186 (13%), Positives = 67/186 (36%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + + L+ + I ++++ + + +IL I GY +P L Sbjct: 2 IIRRYLVKQVVSTSLVVIALLTLIMMGGRLIKYFGVAAQGRLDASILFSIIGYRLPEFLT 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P F + V + + E+ +++ +G SR L + ++ + ++ + + + Sbjct: 62 LILPLGFFIGLMLVFGRLYVDHEMAVLNGSGVSRHQLARLLIPMTLVYMVCQSVLMLWMT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P ++L+ + F + F S L+ IF + Sbjct: 122 PWGLREFEKLTTTQAVRTGFDLVRPREFISSGPYTIYAGSLSEDRKNLKDIFFYQRAAKE 181 Query: 183 THKIYY 188 Sbjct: 182 GKPDVM 187 >gi|218679276|ref|ZP_03527173.1| permease YjgP/YjgQ family protein [Rhizobium etli CIAT 894] Length = 312 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 99/305 (32%), Gaps = 9/305 (2%) Query: 50 LKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAIL 109 + ++ +P +L PF VL +NR EL++ G S + P + ++L Sbjct: 3 ILMTAVRLPLILQQTVPFIALFVGMTVLIGLNRKYELVVTRAAGISVWQFMSPFIAGSLL 62 Query: 110 LSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT 169 L I + N + + + + + + + + Sbjct: 63 LGILTMTALNPLAAWGQRQALLVESDWRGENAVLRKAPQIPWLRQISGRDDVIIGAHTVQ 122 Query: 170 LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ 229 G ++D+ + D L DG + + + + + ++Q Sbjct: 123 ENGTKLIDAVLIHFDSS---GQVILRQDAATAKLEDGYWQLNNVVERKPGEIPVRKASVQ 179 Query: 230 TESANSSTIVLK---ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFG 286 + V + A + F L+ + ++F+ L+Q L V Sbjct: 180 LRTNLKQDFVQERLTAPETIGFFDLSNRIAAAKSFGISTKALETQFNSLLSQPLLLVAMT 239 Query: 287 LISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCI 346 I+ + K + Q + + + +S V + + ++ + P + ++ + Sbjct: 240 FIAATVSLKFSRFNQSR---SVILGGILSGFVLYVITVLVKAFGSSGVVPPFVATWIPVV 296 Query: 347 SSIFL 351 ++ L Sbjct: 297 VALAL 301 >gi|57237667|ref|YP_178915.1| hypothetical protein CJE0913 [Campylobacter jejuni RM1221] gi|86152068|ref|ZP_01070280.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 260.94] gi|86153259|ref|ZP_01071463.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni HB93-13] gi|121613133|ref|YP_001000511.1| hypothetical protein CJJ81176_0843 [Campylobacter jejuni subsp. jejuni 81-176] gi|157415093|ref|YP_001482349.1| hypothetical protein C8J_0773 [Campylobacter jejuni subsp. jejuni 81116] gi|167005447|ref|ZP_02271205.1| hypothetical protein Cjejjejuni_04350 [Campylobacter jejuni subsp. jejuni 81-176] gi|315124344|ref|YP_004066348.1| hypothetical protein ICDCCJ07001_795 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|57166471|gb|AAW35250.1| membrane protein, putative [Campylobacter jejuni RM1221] gi|85840853|gb|EAQ58103.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 260.94] gi|85842985|gb|EAQ60196.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni HB93-13] gi|87249473|gb|EAQ72433.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 81-176] gi|157386057|gb|ABV52372.1| hypothetical protein C8J_0773 [Campylobacter jejuni subsp. jejuni 81116] gi|307747735|gb|ADN91005.1| Putative membrane protein [Campylobacter jejuni subsp. jejuni M1] gi|315018066|gb|ADT66159.1| hypothetical protein ICDCCJ07001_795 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315058276|gb|ADT72605.1| Predicted permease YjgP/YjgQ family [Campylobacter jejuni subsp. jejuni S3] gi|315928910|gb|EFV08167.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 305] gi|315931165|gb|EFV10138.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 327] Length = 341 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 54/324 (16%), Positives = 114/324 (35%), Gaps = 14/324 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+L + L + I ++ +Q L SS S LLK+ G+++P + Sbjct: 1 MKLSLRYVLNQFLSTNLSIFFVLFAIVSMVFFIQLAKLTSSIEISFLDLLKLYGFMLPRI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P F + T L +++ E +++ G S + L K L +A L+S F+ + + Sbjct: 61 LIFTLPISFFISLTLALFRLSKENESIVLFTLGFSPMILAKFFLKIASLISAFMLVVALV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + F+Y + D + + + ++ + Sbjct: 121 MIPIVFELQDNFVNYKSTQVKFNYKTGEFGQKFLDWMIFIEKQDSDKYENIIMYRPKHKA 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKS-PISKDISIMKFKSYTLQTESANSSTIV 239 ++ A+ + + + + + + I +F + + T+ + Sbjct: 181 DDKEQLIIAKEAHVQRKDDSFAFSLNQGKMYNFEQGQSIFSGEFDTLVVNTQFNTDNLQT 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 K + N+ N P+ + T LFP+ L ++ Sbjct: 241 KKFYE---------YWNDLNENPQRAREFVI----YTTIALFPLASTLFALCFGLVTYRY 287 Query: 300 RQRKKIHPIFISLSISFGVFWGFS 323 + +F ++I FG+ FS Sbjct: 288 EKGYVYLGMFGVIAIYFGLLSSFS 311 >gi|283954397|ref|ZP_06371917.1| hypothetical protein C414_000220013 [Campylobacter jejuni subsp. jejuni 414] gi|283794014|gb|EFC32763.1| hypothetical protein C414_000220013 [Campylobacter jejuni subsp. jejuni 414] Length = 341 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 58/325 (17%), Positives = 117/325 (36%), Gaps = 16/325 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+L + L + I ++ +Q L SS S LLK+ G+++P + Sbjct: 1 MKLSLRYVLNQFLSTNLSIFFVLFTIVSMVFFIQLAKLTSSIQISFLDLLKLYGFMLPRI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P F + T L +++ E +++ G S + L K L +A L+S + + + Sbjct: 61 LIFTLPISFFISLTLALFRLSKENESIVLFTLGFSPMILAKFFLKIASLISALMLVVALV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + F+Y + D + + + ++ + Sbjct: 121 MIPIVFELQDNFVNYKSIQVKFNYKTGEFGQKFLDWMIFIEKQDSGKYENIIMYHPKHKA 180 Query: 181 TQTHKIYYAQSGSIDL--DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 ++ A+ + D A LN G+++ S +F + + T+ + Sbjct: 181 DDKEQLIIAKEAHVQRKDDGFAFSLNQGKMYNFDQGQSIFSG-EFDTLVVNTQFNTDNLQ 239 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 K + N+ N P+ + T LFP+ L ++ Sbjct: 240 TKKFYE---------YWNDLNENPQRAREFVIYA----TIALFPLASTLFALCFGLVTYR 286 Query: 299 VRQRKKIHPIFISLSISFGVFWGFS 323 + +F ++I FG+ FS Sbjct: 287 YEKGYVYLGMFGVIAIYFGLLSSFS 311 >gi|258542690|ref|YP_003188123.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-01] gi|256633768|dbj|BAH99743.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-01] gi|256636827|dbj|BAI02796.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-03] gi|256639880|dbj|BAI05842.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-07] gi|256642936|dbj|BAI08891.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-22] gi|256645991|dbj|BAI11939.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-26] gi|256649044|dbj|BAI14985.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-32] gi|256652031|dbj|BAI17965.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655088|dbj|BAI21015.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-12] Length = 364 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 30/352 (8%), Positives = 94/352 (26%), Gaps = 3/352 (0%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 Y+ + + +V + ++ +L++ + + +L + P +L Sbjct: 12 LLRYLSMALLTRVIFCGAVLVGLLEILALLEQTTPILQRHLGIQGILSFAAMRAPFLLAG 71 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + +LT M +E+ I+ G S L K ++ +++ + ++ + P Sbjct: 72 ALPLSVLIGALLMLTQMTLASEIAILRACGLSTFGLYKYLIPATLVIGFAGVVLDDQVTP 131 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + + + + N + I + Sbjct: 132 RSEQALAAWWNRTDPHPENGHAFWFHDGNRIAHIGYTSDGGNMLTKVD---IYIRDASGR 188 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 + + + +L++ + + + N Sbjct: 189 LQQILHAKSADYTHTRGWLLHNVDSITVEGEKTTRLPSVQDMGWDTSLHPWEFIRLSAEN 248 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 S + + +R + ++ LI++ R Sbjct: 249 PPLSSTTILGMLRGRLPSHTSPGFLEAGLLERFLRPASLLVLLLIALPTIYIPPRTGTRS 308 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + + F + G + P I + + ++++ Sbjct: 309 WVPVWCLGSGLLFIIVQGMLRAMGNAGLLPPAIATIPALIIFTLGAITVLLR 360 >gi|116330556|ref|YP_800274.1| permease [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116124245|gb|ABJ75516.1| Permease [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 606 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 31/213 (14%), Positives = 64/213 (30%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 YIL I FL++ F + V+ + + I L LL GYL+ LP Sbjct: 106 ILNRYILGEILSPFLVALAFFTMVYMVLALQKMIGLFVGKGVDPLRLLDYFGYLLANTLP 165 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M P M ++ ++E+ I + G S + L ++++ + + Sbjct: 166 MTIPMACLMSGIMAAGRLSGDSEITAIRSAGVSFPRIYINFLAFGFVMALVVAYLNFYLS 225 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P+ + + + + F + + Q Sbjct: 226 PENTRKMNEFNKWVLAYNPLLAITPGQFSGDKTQDLFEKRARTMYTDGMNSDTGQLKGVQ 285 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPIS 215 + G+ + ++ G I+ Sbjct: 286 IREWEIFLEGNEYFNLGGKMIPMGGSRIIQIIN 318 Score = 59.2 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 35/97 (36%) Query: 259 NYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGV 318 ++L + E H+R+ + +IF IS + + L I F Sbjct: 466 QQGKKVLTDFNVEIHRRIAMPISCLIFFFISFPLGLVVKRSGKGMSFTLAVVFLMIYFTF 525 Query: 319 FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 F S I + + + P L + SI +++ + Sbjct: 526 FTLGSTISYNDKVPDWIGPWSANILIALLSINIMIKR 562 >gi|188993099|ref|YP_001905109.1| Predicted YjgP/YjgQ family permease [Xanthomonas campestris pv. campestris str. B100] gi|167734859|emb|CAP53070.1| Predicted YjgP/YjgQ family permease [Xanthomonas campestris pv. campestris] Length = 360 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 52/365 (14%), Positives = 129/365 (35%), Gaps = 15/365 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L +SFL + + ++ ++ ++ + ++ +LL G Sbjct: 1 MPKLDRYLLSDFTQSFLATLIVLLVVSVGGVLVDILGNIADGRIPARLLLSQVGLQFVAY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP++ P + L + R++E+ +I G +++P+L+L + + + + Sbjct: 61 LPIILPLALMLGLLLALARLYRDSEMAVITAIGIGPRRMLRPILWLVVPVVVVIGACSLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P T + + A ++ + LE F L + ++ +P+ G + + Sbjct: 121 LGPWASRTAELMLEDANRSVVMAGLESGKFTPLSGGGVVYLTTISPDGKGLGKVFMQRQK 180 Query: 181 TQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPI--SKDISIMKFKSYTLQTESANS 235 + A+ G++ + + L DG D +M F S + Sbjct: 181 DDRIDVVTAERGAMFFEGKTDRYLRLEDGHRIEGPAGAQGLDYRLMTFASNDVALPDRTK 240 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + + L+ + R+E H+RL L + F L+++ + Sbjct: 241 AHDANDPEVMSTFKLI----------GDARPIARAELHRRLAPPLLALAFALLTLPLSRS 290 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 ++ +I F++ + + + I + SI+ Sbjct: 291 APRQQRYGRIMLAFLAYLVGTNLMIVGTQWIANGKVPGAVGLWWLTLPLLAVSIWAYARD 350 Query: 356 KKYTK 360 + ++ Sbjct: 351 GRLSR 355 >gi|218296306|ref|ZP_03497062.1| permease YjgP/YjgQ family protein [Thermus aquaticus Y51MC23] gi|218243378|gb|EED09908.1| permease YjgP/YjgQ family protein [Thermus aquaticus Y51MC23] Length = 336 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 41/340 (12%), Positives = 97/340 (28%), Gaps = 20/340 (5%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 Y+L+ + + + + + + + S +L + Y +P L + Sbjct: 2 LGRYVLKEVLLPYGVGVFLFMALLTFDLLSSLSGVFLSRGAGAEAILLLVLYRLPWTLSL 61 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P L+ + R++EL G + L+KP+L L++L+++ + + P Sbjct: 62 ALPLGLVFAILVGLSRLIRHSELKAAYAAGVPPLALLKPLLLLSLLVALVNLYNLAEVRP 121 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+ + + ++ Q + Sbjct: 122 RALEAYDRALARLLYGEGGPSGVLRRQVYALEGQGVYYAEEVVPEVGQNRLYGLRVVDEK 181 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 +IY A+ G D + + E + P + S Sbjct: 182 GRIYSAKEGVWDREGWQFLGYVLEEGKLKPFQGILPFPA-------LFRPKESLGSKDPY 234 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 D + L R + R H+RL L G + Sbjct: 235 DSSTLEELW-------QRARVEPAARFALHRRLADALGGFFLGFAAAALGLSLRE----- 282 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 F+ + + ++ + ++ + + +L Sbjct: 283 -AAWAFLGVVLLIFGYYVLWTLSAQLARYDVSPLLAHLPN 321 >gi|145637643|ref|ZP_01793298.1| predicted permease [Haemophilus influenzae PittHH] gi|145269166|gb|EDK09114.1| predicted permease [Haemophilus influenzae PittHH] Length = 195 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 21/185 (11%), Positives = 52/185 (28%), Gaps = 1/185 (0%) Query: 173 IFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 + K+ +A S D L + + +++ Sbjct: 11 YIYTFDQQHNLIKLKHANQASYSEDEAKWTLRQVNHSTITKDEIITTNHLSETWETSLTP 70 Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + L+ ++S L + + + + + F +++ Q + + L+++ Sbjct: 71 DKLGAVSLRPTSLSISGLYH-YISFLRETGQDVSRFELTFWRKIFQPVSVGVMMLLALSF 129 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 I + F V + P L L I I+ L Sbjct: 130 IFGSLRSVTAGARIVTGICVGFLFYVVNEILGQTSVVYGIPAIFGALIPSLLFIVMIWWL 189 Query: 353 MIKKK 357 + +K+ Sbjct: 190 LSRKR 194 >gi|34763637|ref|ZP_00144566.1| Hypothetical Membrane Spanning Protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27886690|gb|EAA23834.1| Hypothetical Membrane Spanning Protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 191 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 25/183 (13%), Positives = 52/183 (28%), Gaps = 6/183 (3%) Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 +++ ++ +I A+S D D I ++ ++ S Sbjct: 10 FETQISKPKEIITAKSAKFDTDEDKWIFSNVNIYNVDTKETVTKTEYKSDLYKDDPSNFI 69 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + L N E Y +E KR + I I + A Sbjct: 70 RASAEDPRMLTIKELKKTIKEQKNI-GEDTRIYLAELAKRYSFPFASFIVAFIGLSA--S 126 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLM 353 VR + + I + +G + S + N P + ++ I + Sbjct: 127 SKYVRGGRTTMNLVICVVAGYGYYLV-SGAFEAMSLNGIVNPFVASWIPNILYLIIGIYF 185 Query: 354 IKK 356 + + Sbjct: 186 MNR 188 >gi|313672807|ref|YP_004050918.1| permease yjgp/yjgq family protein [Calditerrivibrio nitroreducens DSM 19672] gi|312939563|gb|ADR18755.1| permease YjgP/YjgQ family protein [Calditerrivibrio nitroreducens DSM 19672] Length = 364 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 46/362 (12%), Positives = 113/362 (31%), Gaps = 5/362 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+LY L+ + R+F++ F+ I + ++ + + P Sbjct: 1 MNKFQLYFLKILIRNFIVVEAFVYIIYMFFMFFTQSKYIARYGATFKDIFIYDVMRSPVF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P F + + R TE+ + G S ++++K ++FL+ +S+ +F Sbjct: 61 VSQTLPVSFIVAVVVTFIILIRTTEITAYVSIGGSLLSILKVLIFLSFSVSLVMFFLTEF 120 Query: 121 IEPKCRST---IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD 177 + PK + K + + + + L + + + FI Sbjct: 121 VVPKSQVKSNDYKTKYIEKREEVRVTTLNNFWIKDKNSFIQVGTIDIINKKLFDIKFIDL 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + K+ Y ++ +L EV + + Sbjct: 181 DENGKIVKVRYISQADYIEGKKWSVLEYKEVDTTDVPKIVKEEKNLEQENDFFTKLVDVS 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD-KR 296 +V + + S + + + ++ ++ L V+ ++ + Sbjct: 241 LVSQPKELTFSE-IKKIVKFYKSKGLSYSRHMCYYYNKIANILNVVLLVIVVLPFLIDLS 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + + + F F + P++ L F+F F K+ Sbjct: 300 RGFSYVRAAGNGIVIIFLYFIAQSTFFSMGKSGVMPPFWSNFLGYFIFIAVGFFEYYRKR 359 Query: 357 KY 358 K Sbjct: 360 KL 361 >gi|116327644|ref|YP_797364.1| permease [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116120388|gb|ABJ78431.1| Permease [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 606 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 31/213 (14%), Positives = 64/213 (30%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 YIL I FL++ F + V+ + + I L LL GYL+ LP Sbjct: 106 ILNRYILGEILSPFLVALAFFTMVYMVLALQKMIGLFVGKGVDPLRLLDYFGYLLANTLP 165 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M P M ++ ++E+ I + G S + L ++++ + + Sbjct: 166 MTIPMACLMSGIMAAGRLSGDSEITAIRSAGVSFPRIYINFLAFGFVMALVVAYLNFYLS 225 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P+ + + + + F + + Q Sbjct: 226 PENTRKMNEFNKWVLAYNPLLAITPGQFSGDKTQDLFEKRARTMYTDGMNSDTGQLKGVQ 285 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPIS 215 + G+ + ++ G I+ Sbjct: 286 IREWEIFLEGNEYFNLGGKMIPMGGSRIIQIIN 318 Score = 59.2 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 35/97 (36%) Query: 259 NYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGV 318 ++L + E H+R+ + +IF IS + + L I F Sbjct: 466 QQGKKVLTDFNVEIHRRIAMPISCLIFFFISFPLGLVVKRSGKGMSFTLAVVFLMIYFTF 525 Query: 319 FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 F S I + + + P L + SI +++ + Sbjct: 526 FTLGSTISYNDKVPDWIGPWSANILIALLSINIMIKR 562 >gi|284799561|ref|ZP_06390218.1| permease, YjgP/YjgQ family [Neisseria subflava NJ9703] gi|284797389|gb|EFC52736.1| permease, YjgP/YjgQ family [Neisseria subflava NJ9703] Length = 195 Score = 70.0 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 17/189 (8%), Positives = 59/189 (31%), Gaps = 8/189 (4%) Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 I D ++ + L + ++S +++ + + Sbjct: 12 IWQRNDKNELTQAAEAESAVLNPDGSWQLKNIRRSILGEDKVEVSTAAEENWPISVKRNL 71 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 +++K + ++ L ++ + + Y + ++L + + L++ Sbjct: 72 MDVLLVKPDQMSVGELT-TYIDHLEKNNQNTQVYAIAWWRKLVYPVAAWVMALVAFAF-- 128 Query: 295 KRALVRQRKKIHPIFISLSISFGVFW---GFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 R +F + + + F + P+ L LF + ++ Sbjct: 129 TPQTTRHGNMGLKLFGGICLGLLFHFAGRLFGFTSQLYGVPPFLAGALPTVLFALLAV-- 186 Query: 352 LMIKKKYTK 360 +I+++ + Sbjct: 187 YLIRRQEKR 195 >gi|331001132|ref|ZP_08324763.1| permease, YjgP/YjgQ family [Parasutterella excrementihominis YIT 11859] gi|329569437|gb|EGG51215.1| permease, YjgP/YjgQ family [Parasutterella excrementihominis YIT 11859] Length = 384 Score = 70.0 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 49/362 (13%), Positives = 115/362 (31%), Gaps = 22/362 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + + + + + + I I +++ +N + +L++ Y LP Sbjct: 2 IYRKALTSELSNTAGGAFTVLFSIVVTIGLVRILNQTAGGRYDTGSILEVVAYTSLINLP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGT-SRITLIKPVLFLAILLSIFLFISENII 121 + + L R++E+ + + G S + I+PVL A+ + + + + Sbjct: 62 ALISLALFLAVFMTLNRYWRDSEMFVWFSAGGLSLTSWIRPVLRFALPVVLVVAACSIAV 121 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD--SR 179 P R+ ++ + S L F + + + ++ + Sbjct: 122 SPWSRAQVQAYRDRFAQKEDISKLSSGRFIEAKSGRQVFFLEGVDQEKGKVKTLLMVELK 181 Query: 180 DTQTHKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + G I + I+L+DG + P S+ F+ Y ++ +S+ S Sbjct: 182 KDGSRSVLVSDRGHIENKPNGDRYIVLDDGRKYDTKPSGLGASVSDFREYEIRMDSSPSE 241 Query: 237 T-IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 K N + L+ SE R++ L + ++A Sbjct: 242 VGANKKLNAMPIEDLI----------KRTDNRAASELFWRISWPLVALNLA---LLAIPL 288 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLM 353 + K + ++ I S I + LY+ + L Sbjct: 289 SYNNPRSMKYYGQTAAVLIFILYLNALSIFQTWITQGKVGILGATLYMNVPVAVLTTFLF 348 Query: 354 IK 355 + Sbjct: 349 YR 350 >gi|227536228|ref|ZP_03966277.1| YjgP/YjgQ family permease [Sphingobacterium spiritivorum ATCC 33300] gi|227243835|gb|EEI93850.1| YjgP/YjgQ family permease [Sphingobacterium spiritivorum ATCC 33300] Length = 494 Score = 70.0 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 39/274 (14%), Positives = 91/274 (33%), Gaps = 6/274 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK L IL+ + F+++ ++F+ ++ + + I+ + ++L++ GY Sbjct: 1 MKKIHLLILQSFIKPFIVTFCIVMFVLLMLFLFKYIDDLIGKGFEWYVILQLIGYQCAVQ 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + ++ + EL+ I G S + P+ L L S F+ + Sbjct: 61 MQMALPLSMLLSSIMTFGNLGESYELVAIKAAGVSLRKAMTPLFILVALFSAGSFLFSDY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + L + ++ +F I+ + + T+ ++ Sbjct: 121 ILPVVNLKMGSLLYDVRNKKADFLIKPGIFNNTIPGYAIRAKSKSKDGTVLNELMIYDHT 180 Query: 181 TQTHKI--YYAQSGSIDLDRQAII----LNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + + A+ G + L DG + +S S K + Sbjct: 181 SGSSSNNVLLAKEGFVQNSPDNNYMVLRLKDGIRYEESKGKDSKSYDPRKQFVRFQFKET 240 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETY 268 + + ++ L+ Y Sbjct: 241 EQKFDMGDFQMKRTDENLFKSHHAMLNLRQLKMY 274 Score = 46.1 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 50/112 (44%), Gaps = 7/112 (6%) Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 L N +R + + YR EFH++ T + ++ I A A++R+ Sbjct: 347 TETLGNKTLEYKAFRDKDI-RYRLEFHRKFTLAVSCLLLFGIG---APLGAIIRKGGLGL 402 Query: 307 PIFISLSISFGVFWGFSYIIHKIEQNPYYIPI--LYLFLFCISSIFLLMIKK 356 P+ +++ I F ++ S + K ++ P+ +++ + ++ + + + K Sbjct: 403 PVVMAI-IFFLIYHIISTVSEKAAKDASLAPMTGMWMAIIILTPLAIFLTYK 453 >gi|325917726|ref|ZP_08179914.1| putative permease [Xanthomonas vesicatoria ATCC 35937] gi|325536055|gb|EGD07863.1| putative permease [Xanthomonas vesicatoria ATCC 35937] Length = 360 Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 51/357 (14%), Positives = 129/357 (36%), Gaps = 15/357 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L +SFL + + ++ ++ ++ + ++ +LL G Sbjct: 1 MPKLDRYLLSDFTQSFLATLIVLLVVSVGGVLVDILGNIADGRIPARLLLSQVGLQFVAY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP++ P + L + R++E+ +I G +++P+L L + + I + + Sbjct: 61 LPIILPLALMLGLLLALARLYRDSEMAVITAIGVGPKRMLRPMLMLVVPVVIIIGLCSLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P T + + A ++ + LE F L + ++ + + G + + Sbjct: 121 LGPWASRTAETMLEDANRSVLMAGLESGKFTPLSGGGVVYLTTISADGKNLGKVFMQRQK 180 Query: 181 TQTHKIYYAQSGSID---LDRQAIILNDGEVHRK--SPISKDISIMKFKSYTLQTESANS 235 + A+ G++ + + L DG + + D +MKF S + Sbjct: 181 DDRLDVVTAERGAMFFEGKTDRYLRLEDGYRIEGPAAGDTLDYRLMKFASNDVALPDRTR 240 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + + LL+ + R++ H+RL L + F L+++ + Sbjct: 241 THDANDPEVMWTTQLLS----------DERPAARAQLHERLAPPLLALAFALLTLPLSRS 290 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 ++ +I F++ + + + I + +++ Sbjct: 291 APRQQRYGRIMLAFLAYMVGTNLMIVGTQWIANGKTPAALGLWWLTLPLLAVAVWAY 347 >gi|325499819|gb|EGC97678.1| hypothetical protein ECD227_3916 [Escherichia fergusonii ECD227] Length = 335 Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 45/326 (13%), Positives = 113/326 (34%), Gaps = 17/326 (5%) Query: 33 LQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNT 92 ++ + N++L + G +P + ++ P + L + +E+ ++ Sbjct: 1 MRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHAC 60 Query: 93 GTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFR 152 G S+ L+K + LA+ I I+ P ++ A+A+ + L + F + Sbjct: 61 GLSKGVLVKAAMILALFTGIVAAINVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQ 120 Query: 153 LDDDLYIKISKYNPNNTLQGIFIVDSRDTQT--HKIYYAQSGSI---DLDRQAIILNDGE 207 + + + + + +F+ R + A SG + Q + LN G Sbjct: 121 ATNGSAVLFIESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGT 180 Query: 208 VHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLET 267 + + +D I F+ Y + + +++ L N + + Sbjct: 181 RFEGTALLRDFRITDFQDYQAIIGHQAVALDPNDTDQMDMTTLWNTD----------SDR 230 Query: 268 YRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH 327 R+E + RLT + L+ + + + + P + + F + Sbjct: 231 ARAELNWRLTLIFTVFMMALMVVPLSVVNPRQGRVLSMLPAMLLYLLFFLIQTSLKSNGG 290 Query: 328 KIEQNPYYIPILYLFLFCISSIFLLM 353 K + +P ++ ++ + + Sbjct: 291 KGKLDPTLW--MWTVNLIYLALAIAL 314 >gi|300772186|ref|ZP_07082056.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC 33861] gi|300760489|gb|EFK57315.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC 33861] Length = 494 Score = 69.6 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 39/274 (14%), Positives = 91/274 (33%), Gaps = 6/274 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK L IL+ + F+++ ++F+ ++ + + I+ + ++L++ GY Sbjct: 1 MKKIHLLILQSFIKPFIVTFCIVMFVLLMLFLFKYIDDLIGKGFEWYVILQLIGYQCAVQ 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + ++ + EL+ I G S + P+ L L S F+ + Sbjct: 61 MQMALPLSMLLSSIMTFGNLGESYELVAIKAAGVSLRKAMTPLFILVALFSAGSFLFSDY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + L + ++ +F I+ + + T+ ++ Sbjct: 121 ILPVVNLKMGSLLYDVRNKKADFLIKPGIFNNTIPGYAIRAKSKSKDGTVLNELMIYDHT 180 Query: 181 TQTHKI--YYAQSGSIDLDRQAII----LNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + + A+ G + L DG + +S S K + Sbjct: 181 SGSSSNNVLLAKEGFVQNSPDNSYMVLKLKDGIRYEESKGKDSKSYDPRKQFVRFQFKET 240 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETY 268 + + ++ L+ Y Sbjct: 241 EQKFDMGDFQMKRTDENLFKSHHAMLNLRQLKMY 274 Score = 45.8 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 50/112 (44%), Gaps = 7/112 (6%) Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 L N +R + + YR EFH++ T + ++ I A A++R+ Sbjct: 347 TETLGNKTLEYKAFRDKDI-RYRLEFHRKFTLAVSCLLLFGIG---APLGAIIRKGGLGL 402 Query: 307 PIFISLSISFGVFWGFSYIIHKIEQNPYYIPI--LYLFLFCISSIFLLMIKK 356 P+ +++ I F ++ S + K ++ P+ +++ + ++ + + + K Sbjct: 403 PVVMAI-IFFLIYHIISTVSEKAAKDASLAPMTGMWMAIIVLTPLAIFLTYK 453 >gi|332662936|ref|YP_004445724.1| permease YjgP/YjgQ family protein [Haliscomenobacter hydrossis DSM 1100] gi|332331750|gb|AEE48851.1| permease YjgP/YjgQ family protein [Haliscomenobacter hydrossis DSM 1100] Length = 538 Score = 69.6 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 25/193 (12%), Positives = 67/193 (34%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K + ++ F+++ +F+ + + I+ ++ ++++ Y + Sbjct: 10 LKRIDELVITSFIPPFIVAFSVSLFVLLMQMLWIYIDDLAGKGLGFFTVIELLSYRAVSF 69 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +PM P + + ++ + + EL + + G S + +++P+L +I F + + Sbjct: 70 VPMALPLGILLSSVMLMGNFAEHYELSSMKSAGLSLVRIMRPMLIFSIFTVAFSWYCSDY 129 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P Q L+ +F I I K + I+ Sbjct: 130 LIPAANLKFGSRMWDIQQTKPALRLDVGVFNDDFQGFTIHIGKKMSDGRTIKDVIIYDHS 189 Query: 181 TQTHKIYYAQSGS 193 Y + Sbjct: 190 EANSGKYTVITAK 202 Score = 38.8 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 9/89 (10%), Positives = 22/89 (24%) Query: 263 ELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGF 322 E + ++ + + + IF I + + + + Sbjct: 415 ENRVKFIYDWQMKYSIAVVCFIFMFIGAPMGAIVRKGGFGYPLLVAIVFFMLFVILTIFC 474 Query: 323 SYIIHKIEQNPYYIPILYLFLFCISSIFL 351 I + Y L + I+L Sbjct: 475 RKIAETFVVSAYLAAWLPCLILMPLGIWL 503 >gi|86150264|ref|ZP_01068491.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni CF93-6] gi|88597526|ref|ZP_01100760.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 84-25] gi|218562454|ref|YP_002344233.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85839380|gb|EAQ56642.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni CF93-6] gi|88190118|gb|EAQ94093.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 84-25] gi|112360160|emb|CAL34954.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284926071|gb|ADC28423.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni IA3902] gi|315927714|gb|EFV07043.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 341 Score = 69.3 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 53/324 (16%), Positives = 113/324 (34%), Gaps = 14/324 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+L + L + I ++ +Q L SS S LLK+ G+++P + Sbjct: 1 MKLSLRYVLNQFLSTNLSIFFVLFAIVSMVFFIQLAKLTSSIEISFLDLLKLYGFMLPRI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P F + T L +++ E +++ G S + L K L +A L+S F+ + + Sbjct: 61 LIFTLPISFFISLTLALFRLSKENESIVLFTLGFSPMILAKFFLKIASLISAFMLVVALV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + F+Y + D + + + ++ + Sbjct: 121 MIPIVFELQDNFVNYKSTQVKFNYKTGEFGQKFLDWMIFIEKQDSDKYENIIMYRPKHKA 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKS-PISKDISIMKFKSYTLQTESANSSTIV 239 ++ A+ + + + + + + I +F + + T+ + Sbjct: 181 DDKEQLIIAKEAHVQRKDDSFAFSLNQGKMYNFEQGQSIFSGEFDTLVVNTQFNTDNLQT 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 K + N+ N + + T LFP+ L ++ Sbjct: 241 KKFYE---------YWNDLNENLQRAREFVI----YTTIALFPLASTLFALCFGLVTYRY 287 Query: 300 RQRKKIHPIFISLSISFGVFWGFS 323 + +F ++I FG+ FS Sbjct: 288 EKGYVYLGMFGVIAIYFGLLSSFS 311 >gi|301028100|ref|ZP_07191378.1| putative inner membrane protein [Escherichia coli MS 196-1] gi|312965942|ref|ZP_07780168.1| conserved hypothetical protein [Escherichia coli 2362-75] gi|299878817|gb|EFI87028.1| putative inner membrane protein [Escherichia coli MS 196-1] gi|312289185|gb|EFR17079.1| conserved hypothetical protein [Escherichia coli 2362-75] gi|313646462|gb|EFS10924.1| hypothetical protein SF2457T_5377 [Shigella flexneri 2a str. 2457T] gi|323171707|gb|EFZ57353.1| hypothetical protein ECLT68_3916 [Escherichia coli LT-68] gi|323176176|gb|EFZ61768.1| hypothetical protein ECOK1180_4866 [Escherichia coli 1180] gi|323181995|gb|EFZ67406.1| hypothetical protein ECOK1357_4673 [Escherichia coli 1357] gi|323189857|gb|EFZ75135.1| hypothetical protein ECRN5871_1644 [Escherichia coli RN587/1] gi|327250207|gb|EGE61926.1| hypothetical protein ECSTEC7V_5011 [Escherichia coli STEC_7v] gi|332083262|gb|EGI88493.1| hypothetical protein SB521682_5141 [Shigella boydii 5216-82] gi|332083699|gb|EGI88917.1| hypothetical protein SD15574_5322 [Shigella dysenteriae 155-74] gi|332087092|gb|EGI92226.1| hypothetical protein SB359474_4825 [Shigella boydii 3594-74] gi|332748941|gb|EGJ79364.1| hypothetical protein SFK671_4980 [Shigella flexneri K-671] gi|332749216|gb|EGJ79637.1| hypothetical protein SF434370_4579 [Shigella flexneri 4343-70] gi|332749777|gb|EGJ80190.1| hypothetical protein SF274771_5047 [Shigella flexneri 2747-71] gi|332763114|gb|EGJ93357.1| putative transmembrane possibly involved in transport conserved inner membrane protein [Shigella flexneri 2930-71] gi|333009259|gb|EGK28715.1| hypothetical protein SFK218_0006 [Shigella flexneri K-218] gi|333011251|gb|EGK30665.1| hypothetical protein SFK272_0204 [Shigella flexneri K-272] gi|333011932|gb|EGK31317.1| hypothetical protein SFK304_5276 [Shigella flexneri K-304] gi|333012148|gb|EGK31530.1| hypothetical protein SFK227_5241 [Shigella flexneri K-227] Length = 335 Score = 69.3 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 43/331 (12%), Positives = 118/331 (35%), Gaps = 19/331 (5%) Query: 33 LQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNT 92 ++ + N++L + G +P + ++ P + L + +E+ ++ Sbjct: 1 MRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHAC 60 Query: 93 GTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFR 152 G S+ L+K + LA+ +I ++ P ++ A+A+ + L + F + Sbjct: 61 GLSKAVLVKAAMILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQ 120 Query: 153 LDDDLYIKISKYNPNNTLQGIFIVDSRDTQT--HKIYYAQSGSI---DLDRQAIILNDGE 207 + + + + + +F+ R + A SG + Q + LN G Sbjct: 121 ATNGSSVLFIESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGT 180 Query: 208 VHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLET 267 + + +D I F+ Y + + ++ L N + + Sbjct: 181 RFEGTALLRDFRITDFQDYQAIIGHQAVALDPNDTDQMDMRTLWNTDTD----------R 230 Query: 268 YRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH 327 R+E + R+T + L+ + ++ ++ + ++ + F + + Sbjct: 231 ARAELNWRITLVFTVFMMALM---VVPLSVVNPRQGRVLSMLPAMLLYLLFFLIQTSLKS 287 Query: 328 KIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + P L+++ + + L ++ + Sbjct: 288 NGGK-GKLDPTLWMWTVNLIYLALAIVLNLW 317 >gi|255764469|ref|YP_003064807.2| putative permease protein [Candidatus Liberibacter asiaticus str. psy62] gi|254547820|gb|ACT56867.2| putative permease protein [Candidatus Liberibacter asiaticus str. psy62] Length = 361 Score = 69.3 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 46/356 (12%), Positives = 114/356 (32%), Gaps = 9/356 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSS-STESLNILLKISGYLIPTVL 61 Y + ++ L L + + +VI + + N + S++ ++ +P ++ Sbjct: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + PF + V ++NR +EL+I G S L+ P + +ILL IF + N I Sbjct: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Query: 122 EPKCRSTIKQLSAKAQLA---LTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 L + + + D++I K P N + F + Sbjct: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 D + I+ + + + L ++ + + + + Sbjct: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQY---GRIPIDKNSTTLNIPIKMDGFQKF 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 + ++ ++ + ++F+ + L V LI+ + Sbjct: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL--EF 298 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 R + + + F ++ + + + L ++ ++I Sbjct: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 >gi|187477637|ref|YP_785661.1| permease [Bordetella avium 197N] gi|115422223|emb|CAJ48747.1| putative permease [Bordetella avium 197N] Length = 372 Score = 69.3 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 40/360 (11%), Positives = 123/360 (34%), Gaps = 7/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ ++ I + +V + + +++ + + T +++L ++ + T Sbjct: 1 MSLFKRSVVSEITSHAGVVFSTLVVVWLSVLLVRLLGEAAGGTIGADVVLGLAAFSTITA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP + + +T R +E+++ +G S ++PVL +AI +++ + + Sbjct: 61 LPTILAVSLFIAVLTTVTRNYRESEMVVWFASGLSLADWVRPVLRVAIPVALMVAGLTLV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P I + + + S + F + ++ + + + Sbjct: 121 AAPWAYRQIGEYRERFEQRSDLSKVAAGQFAESGRGNRVFFAEDPVDPGDELGAVFARAI 180 Query: 181 TQTHKIYYAQSGS----IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + ++ + ++L+ G + P + ++ + F+ Y ++ ES Sbjct: 181 DPEWFSVLTAKSARGETLENGDRFLVLSKGHRYDLKPGTPEVRLTNFEEYGIRLESKGGE 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + A + S+ R++ L + L++I Sbjct: 241 DPIASARAAAERSSKARSTTQLMEDNTNSS--WSQVMWRVSLPLAALNLALLAIPLGAVN 298 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + + + + + I + P+ + + + + ++ L+ K+ Sbjct: 299 PRLGRSGDLLIAGLVGLLYINLINLSRAWISS-GKLPFGVGVSAIHIIVLAFTVFLLYKR 357 >gi|323157530|gb|EFZ43639.1| hypothetical protein ECEPECA14_0587 [Escherichia coli EPECa14] Length = 335 Score = 69.3 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 43/331 (12%), Positives = 118/331 (35%), Gaps = 19/331 (5%) Query: 33 LQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNT 92 ++ + N++L + G +P + ++ P + L + +E+ ++ Sbjct: 1 MRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHAC 60 Query: 93 GTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFR 152 G S+ L+K + LA+ +I ++ P ++ A+A+ + L + F + Sbjct: 61 GLSKAVLVKAAMILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQ 120 Query: 153 LDDDLYIKISKYNPNNTLQGIFIVDSRDTQT--HKIYYAQSGSI---DLDRQAIILNDGE 207 + + + + + +F+ R + A SG + Q + LN G Sbjct: 121 ATNGSSVLFIESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGT 180 Query: 208 VHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLET 267 + + +D I F+ Y + + ++ L N + + Sbjct: 181 RFEGTALLRDFRITDFQDYQAIIGHQAVALDPNDTDQMDMCTLWNTDTD----------R 230 Query: 268 YRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH 327 R+E + R+T + L+ + ++ ++ + ++ + F + + Sbjct: 231 ARAELNWRITLVFTVFMMALM---VVPLSVVNPRQGRVLSMLPAMLLYLLFFLIQTSLKS 287 Query: 328 KIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + P L+++ + + L ++ + Sbjct: 288 NGGK-GKLDPTLWMWTVNLIYLALAIVLNLW 317 >gi|323162060|gb|EFZ47932.1| hypothetical protein ECE128010_1825 [Escherichia coli E128010] gi|332346340|gb|AEE59674.1| conserved hypothetical protein [Escherichia coli UMNK88] Length = 335 Score = 68.9 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 44/331 (13%), Positives = 118/331 (35%), Gaps = 19/331 (5%) Query: 33 LQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNT 92 ++ + N++L + G +P + ++ P + L + +E+ ++ Sbjct: 1 MRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHAC 60 Query: 93 GTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFR 152 G S+ L+K + LA+ +I I+ P ++ A+A+ + L + F + Sbjct: 61 GLSKAVLVKAAMILAVFTAIVAAINVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQ 120 Query: 153 LDDDLYIKISKYNPNNTLQGIFIVDSRDTQT--HKIYYAQSGSI---DLDRQAIILNDGE 207 + + + + + +F+ R + A SG + Q + LN G Sbjct: 121 ATNGSSVLFIESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGT 180 Query: 208 VHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLET 267 + + +D I F+ Y + + ++ L N + + Sbjct: 181 RFEGTALLRDFRITDFQDYQAIIGHQAVALDPNDTDQMDMRTLWNTDTD----------R 230 Query: 268 YRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH 327 R+E + R+T + L+ + ++ ++ + ++ + F + + Sbjct: 231 ARAELNWRITLVFTVFMMALM---VVPLSVVNPRQGRVLSMLPAMLLYLLFFLIQTSLKS 287 Query: 328 KIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + P L+++ + + L ++ + Sbjct: 288 NGGK-GKLDPTLWMWTVNLIYLALAIVLNLW 317 >gi|255009764|ref|ZP_05281890.1| putative permease [Bacteroides fragilis 3_1_12] gi|313147551|ref|ZP_07809744.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313136318|gb|EFR53678.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 634 Score = 68.9 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 32/205 (15%), Positives = 84/205 (40%), Gaps = 2/205 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +++I++ F+ + +FI + + + ++ + +++L + Y +++ Sbjct: 5 KRLDIFIIKSFLLLFVGTFFICLFIFMMQFLWKYVDELVGKGLEMSVLAQFFFYSALSLV 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PM P + + + ELL + G S + +++P++ L + F +N+I Sbjct: 65 PMSLPLAVLLASLITFGNFGERFELLAMKAAGISLLKIMRPLIVLVFAICCVSFYFQNVI 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ ++ + L + + E +F+ D +K+ + + + I+ Sbjct: 125 GPRAQAKLGTLLISMKQKSPEVDIPEGVFYDEIDGYNLKVQRKDRKTGMLYDVIIYDFSN 184 Query: 182 Q--THKIYYAQSGSIDLDRQAIILN 204 +I A SG +++ L Sbjct: 185 NFDNARIIVADSGRLEMTADKQHLY 209 Score = 43.1 bits (99), Expect = 0.075, Method: Composition-based stats. Identities = 11/99 (11%), Positives = 38/99 (38%), Gaps = 4/99 (4%) Query: 259 NYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGV 318 + ++ E+H+++T L ++F I A ++R+ P+ +S+ Sbjct: 360 AQNDLSIRRHKIEWHRKITISLSCLLFFFIG---APLGGIIRKGGLGMPVIVSVFTFIIY 416 Query: 319 FWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFLLMIKK 356 + + + + + +++ ++ + + K Sbjct: 417 YIIDNTGYKMARDGKWIVWMGMWMSSAILAPLGYFLTYK 455 >gi|126640322|ref|YP_001083306.1| hypothetical protein A1S_0229 [Acinetobacter baumannii ATCC 17978] Length = 266 Score = 68.9 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 31/269 (11%), Positives = 84/269 (31%), Gaps = 3/269 (1%) Query: 89 IDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEEN 148 + + G S ++ V+ A+LL + F + P + + + +A Sbjct: 1 MRSVGISLWRIVGWVMRSALLLIVLSFALSEWVVPYTNEKAQSVKSHRSVAALGEVKGYW 60 Query: 149 LFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEV 208 + +Q + ++D + A+ G D Q + ++ Sbjct: 61 SREGQRFIYIDYANSQGNLRDIQ--VVDFNKDYHLQSLINAEQGKFIQDGQWTLQKASQM 118 Query: 209 HRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETY 268 + + ++ +S L + + L D + S L++ Y ++ +TY Sbjct: 119 DILTDGNSILNNHDQQSLGLALQPKYVHMVTLDPEDLSPSQLISFMRYMDEY-SQVPKTY 177 Query: 269 RSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHK 328 + F +++ + L++ + I + + + F F Sbjct: 178 QLAFWQKVASPFSLITLVLVACSFIFGPLRQQSMGFRLVIALFIGLGFYYLQDFLGYASL 237 Query: 329 IEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + +L + + L+ + + Sbjct: 238 VYAPSPAWFVLMPIILMFGAGSYLLYRAR 266 >gi|333010222|gb|EGK29655.1| hypothetical protein SFVA6_0010 [Shigella flexneri VA-6] Length = 335 Score = 68.9 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 43/331 (12%), Positives = 118/331 (35%), Gaps = 19/331 (5%) Query: 33 LQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNT 92 ++ + N++L + G +P + ++ P + L + +E+ ++ Sbjct: 1 MRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHAC 60 Query: 93 GTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFR 152 G S+ L+K + LA+ +I ++ P ++ A+A+ + L + F + Sbjct: 61 GLSKAVLVKAAMILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQ 120 Query: 153 LDDDLYIKISKYNPNNTLQGIFIVDSRDTQT--HKIYYAQSGSI---DLDRQAIILNDGE 207 + + + + + +F+ R + A SG + Q + LN G Sbjct: 121 ATNGSSVLFIESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGT 180 Query: 208 VHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLET 267 + + +D I F+ Y + + ++ L N + + Sbjct: 181 RFEGTALLRDFRITDFQDYQAIIGHQAVALDPNDTDQMDMRTLWNTDTD----------R 230 Query: 268 YRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH 327 R+E + R+T + L+ + ++ ++ + ++ + F + + Sbjct: 231 ARAELNWRITLVFTVFMMALM---VVPLSVVNPRQGRVLSMLPAMLLYLLFFLIQTSLKS 287 Query: 328 KIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + P L+++ + + L ++ + Sbjct: 288 NGGK-GKLDPTLWMWTVNLIYLALAIVLNLW 317 >gi|160885006|ref|ZP_02066009.1| hypothetical protein BACOVA_03003 [Bacteroides ovatus ATCC 8483] gi|156109356|gb|EDO11101.1| hypothetical protein BACOVA_03003 [Bacteroides ovatus ATCC 8483] Length = 632 Score = 68.9 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 85/205 (41%), Gaps = 2/205 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +++I++ F+ + +FI + + + ++ + ++++ + Y T++ Sbjct: 5 KKLDIFIVKSFLMLFIGTFFICLFIFMMQFLWRYVDELVGKGLEMSVMAQFFFYSALTLV 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P+ P + + + ELL + G S + +++P+ F L F +N++ Sbjct: 65 PVSLPLAVLLASLITFGNFGERYELLAMKAAGISLLKIMRPLAFFVCGLVGVSFYFQNVV 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P ++ + L + + E +F+ D +K++K N + ++ S Sbjct: 125 GPIAQAKLGTLILSMKQKSPELDIPEGVFYSEIKDYNLKVAKKNRKTGMLYDVLIYSMKD 184 Query: 182 QTH--KIYYAQSGSIDLDRQAIILN 204 +I YA SG +++ L Sbjct: 185 GFEKARIIYADSGRLEMTADKQHLW 209 Score = 45.4 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 14/129 (10%), Positives = 46/129 (35%), Gaps = 4/129 (3%) Query: 229 QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 + +N++ L + +++E+HK++T L ++F I Sbjct: 330 SLTQKQKVLSSAVSRAENVANDLGFKKFTMENNDYSIRKHKTEWHKKITISLSCLLFFFI 389 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCIS 347 A ++R+ P+ +S+ + + + + + + ++ ++ Sbjct: 390 G---APLGGIIRKGGLGMPVIVSVLVFIIYYIIDNTGYKMARDGKWIVWMGMWTSSAVLA 446 Query: 348 SIFLLMIKK 356 + + + K Sbjct: 447 PLGVFLTYK 455 >gi|294807984|ref|ZP_06766761.1| putative membrane protein [Bacteroides xylanisolvens SD CC 1b] gi|294444797|gb|EFG13487.1| putative membrane protein [Bacteroides xylanisolvens SD CC 1b] Length = 638 Score = 68.9 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 85/205 (41%), Gaps = 2/205 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +++I++ F+ + +FI + + + ++ + ++++ + Y T++ Sbjct: 11 KKLDIFIVKSFLMLFIGTFFICLFIFMMQFLWRYVDELVGKGLEMSVMAQFFFYSALTLV 70 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P+ P + + + ELL + G S + +++P+ F L F +N++ Sbjct: 71 PVSLPLAVLLASLITFGNFGERYELLAMKAAGISLLKIMRPLAFFVCGLVGVSFYFQNVV 130 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P ++ + L + + E +F+ D +K++K N + ++ S Sbjct: 131 GPIAQAKLGTLILSMKQKSPELDIPEGVFYSEIKDYNLKVAKKNRKTGMLYDVLIYSMKD 190 Query: 182 QTH--KIYYAQSGSIDLDRQAIILN 204 +I YA SG +++ L Sbjct: 191 GFEKARIIYADSGRLEMTADKQHLW 215 Score = 46.1 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 14/129 (10%), Positives = 46/129 (35%), Gaps = 4/129 (3%) Query: 229 QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 + +N++ L + +++E+HK++T L ++F I Sbjct: 336 SLTQKQKVISSAVSRAENVANDLGFKKFTMENNDYSIRKHKTEWHKKITISLSCLLFFFI 395 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCIS 347 A ++R+ P+ +S+ + + + + + + ++ ++ Sbjct: 396 G---APLGGIIRKGGLGMPVIVSVLVFIIYYIIDNTGYKMARDGKWIVWMGMWTSSAVLA 452 Query: 348 SIFLLMIKK 356 + + + K Sbjct: 453 PLGIFLTYK 461 >gi|299147702|ref|ZP_07040765.1| putative permease [Bacteroides sp. 3_1_23] gi|298513885|gb|EFI37771.1| putative permease [Bacteroides sp. 3_1_23] Length = 638 Score = 68.9 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 84/205 (40%), Gaps = 2/205 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +++I++ F+ + +FI + + + ++ + ++++ + Y T++ Sbjct: 11 KKLDIFIVKSFLMLFIGTFFICLFIFMMQFLWRYVDELVGKGLEMSVMAQFFFYSALTLV 70 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P+ P + + + ELL + G S + +++P+ F L F +N++ Sbjct: 71 PVSLPLAVLLASLITFGNFGERYELLAMKAAGISLLKIMRPLAFFVCGLVGVSFYFQNVV 130 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P ++ + L + + E +F+ D +K++K N + ++ + Sbjct: 131 GPIAQAKLGTLILSMKQKSPELDIPEGVFYSEIKDYNLKVAKKNRKTGMLYDVLIYNMKD 190 Query: 182 Q--THKIYYAQSGSIDLDRQAIILN 204 I YA SG +++ L Sbjct: 191 GFENAHIIYADSGRLEMTADKQHLW 215 Score = 45.4 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 14/129 (10%), Positives = 46/129 (35%), Gaps = 4/129 (3%) Query: 229 QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 + +N++ L + +++E+HK++T L ++F I Sbjct: 336 SLTQKQKVLSSAVSRAENVANDLGFKKFTMENNDYSIRKHKTEWHKKITISLSCLLFFFI 395 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCIS 347 A ++R+ P+ +S+ + + + + + + ++ ++ Sbjct: 396 G---APLGGIIRKGGLGMPVIVSVLVFIIYYIIDNTGYKMARDGKWIVWMGMWTSSAVLA 452 Query: 348 SIFLLMIKK 356 + + + K Sbjct: 453 PLGVFLTYK 461 >gi|206889444|ref|YP_002249741.1| putative permease, YjgP/YjgQ family [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741382|gb|ACI20439.1| putative permease, YjgP/YjgQ family [Thermodesulfovibrio yellowstonii DSM 11347] Length = 369 Score = 68.9 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 47/353 (13%), Positives = 116/353 (32%), Gaps = 14/353 (3%) Query: 9 LRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFC 68 ++ R+FL+ + + ++ ++++I+ S ++ Y IP + + PF Sbjct: 11 IKDFVRTFLVLLFSMSCLLSIVGLIEKIDDFMPYKPSTTFFIEYGLYSIPRYIFYLIPFV 70 Query: 69 FAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRST 128 + + + + R+ E LI+ +G L+KP L L I++SI FI ++P+ Sbjct: 71 TLVTSLFIFSIGVRSREFLILSVSGGRLRGLLKPFLILGIVISIVGFIFGEFLQPEFTKK 130 Query: 129 IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYY 188 + + + S +E D + + I ++ K Sbjct: 131 LNFMIEELTQKGKSSIQKELFVRAKDGTVIKIGKFSQQQKKADEVKIFIIKNDALIKRID 190 Query: 189 AQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLS 248 +Q I+ D+ L + V+ + + L+ A I K + ++ Sbjct: 191 SQEAEIEQDQWK--LKNSIVYDFVAGKVEKYDLMDYPLNLKISIAAFKDI-KKIEEFGIA 247 Query: 249 FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA---------ADKRALV 299 L+ ++ RL+ ++ + Sbjct: 248 ELIQKRKELKKVGLSNP-KIDTDISSRLSYNFVTFFMMILGMSLPLGAYEKFNFLFSKGK 306 Query: 300 RQRKKIHPIFISLSISF-GVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 I + + + ++W + + + P + ++ + F+ Sbjct: 307 GGSAAGGIITVGIGLVITIIYWLVYSLFMFMGYSKILPPFISPWITPLIFGFV 359 >gi|309784106|ref|ZP_07678748.1| conserved hypothetical protein [Shigella dysenteriae 1617] gi|308928099|gb|EFP73564.1| conserved hypothetical protein [Shigella dysenteriae 1617] Length = 335 Score = 68.9 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 43/331 (12%), Positives = 118/331 (35%), Gaps = 19/331 (5%) Query: 33 LQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNT 92 ++ + N++L + G +P + ++ P + L + +E+ ++ Sbjct: 1 MRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHAC 60 Query: 93 GTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFR 152 G S+ L+K + LA+ +I ++ P ++ A+A+ + L + F + Sbjct: 61 GLSKAVLVKAAIILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQ 120 Query: 153 LDDDLYIKISKYNPNNTLQGIFIVDSRDTQT--HKIYYAQSGSI---DLDRQAIILNDGE 207 + + + + + +F+ R + A SG + Q + LN G Sbjct: 121 ATNGSSVLFIESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGT 180 Query: 208 VHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLET 267 + + +D I F+ Y + + ++ L N + + Sbjct: 181 RFEGTALLRDFRITDFQDYQAIIGHQAVALDPNDTDQMDMRTLWNTDTD----------R 230 Query: 268 YRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH 327 R+E + R+T + L+ + ++ ++ + ++ + F + + Sbjct: 231 ARAELNWRITLVFTVFMMALM---VVPLSVVNPRQGRVLSMLPAMLLYLLFFLIQTSLKS 287 Query: 328 KIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + P L+++ + + L ++ + Sbjct: 288 NGGK-GKLDPTLWMWTVNLIYLALAIVLNLW 317 >gi|253564060|ref|ZP_04841517.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|251947836|gb|EES88118.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|301161640|emb|CBW21180.1| putative permease [Bacteroides fragilis 638R] Length = 636 Score = 68.9 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 32/205 (15%), Positives = 84/205 (40%), Gaps = 2/205 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +++I++ F+ + +FI + + + ++ + +++L + Y +++ Sbjct: 5 KRLDIFIIKSFLLLFVGTFFICLFIFMMQFLWKYVDELVGKGLEMSVLAQFFFYSALSLV 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PM P + + + ELL + G S + +++P++ L + F +N+I Sbjct: 65 PMSLPLAVLLASLITFGNFGERFELLAMKAAGISLLKIMRPLIVLVFAICCVSFYFQNVI 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ ++ + L + + E +F+ D +K+ + + + I+ Sbjct: 125 GPQAQAKLGTLLISMKQKSPEVDIPEGVFYDEIDGYNLKVQRKDRKTGMLYDVIIYDFSN 184 Query: 182 Q--THKIYYAQSGSIDLDRQAIILN 204 +I A SG +++ L Sbjct: 185 NFDNARIIVADSGRLEMTADKQHLY 209 Score = 43.1 bits (99), Expect = 0.065, Method: Composition-based stats. Identities = 11/98 (11%), Positives = 38/98 (38%), Gaps = 4/98 (4%) Query: 260 YRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVF 319 + ++ E+H+++T L ++F I A ++R+ P+ +S+ + Sbjct: 361 QNDFSIRKHKIEWHRKITISLSCLLFFFIG---APLGGIIRKGGLGMPVIVSVLTFIIYY 417 Query: 320 WGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFLLMIKK 356 + + + + +++ ++ + + K Sbjct: 418 IIDNTGYKMARDGKWIVWMGMWMSSAILAPLGYFLTYK 455 >gi|323166625|gb|EFZ52384.1| hypothetical protein SS53G_3091 [Shigella sonnei 53G] Length = 335 Score = 68.9 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 43/331 (12%), Positives = 117/331 (35%), Gaps = 19/331 (5%) Query: 33 LQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNT 92 ++ + N++L + G +P + ++ P + L + +E+ ++ Sbjct: 1 MRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHAC 60 Query: 93 GTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFR 152 G S+ L+K + LA+ +I ++ P ++ A+A+ + L + F + Sbjct: 61 GLSKAVLVKAAMILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQ 120 Query: 153 LDDDLYIKISKYNPNNTLQGIFIVDSRDTQT--HKIYYAQSGSI---DLDRQAIILNDGE 207 + + + + + +F+ R + A SG + Q + LN G Sbjct: 121 ATNGSSVLFIESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGT 180 Query: 208 VHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLET 267 + + +D I F+ Y + ++ L N + + Sbjct: 181 RFEGTALLRDFRITDFQDYQAIIGHQAVVLDPNDTDQMDMRTLWNTDTD----------R 230 Query: 268 YRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH 327 R+E + R+T + L+ + ++ ++ + ++ + F + + Sbjct: 231 ARAELNWRITLVFTVFMMALM---VVPLSVVNPRQGRVLSMLPAMLLYLLFFLIQTSLKS 287 Query: 328 KIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + P L+++ + + L ++ + Sbjct: 288 NGGK-GKLDPTLWMWTVNLIYLALAIVLNLW 317 >gi|260450919|gb|ACX41341.1| permease YjgP/YjgQ family protein [Escherichia coli DH1] Length = 359 Score = 68.9 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 46/355 (12%), Positives = 128/355 (36%), Gaps = 19/355 (5%) Query: 9 LRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFC 68 +R +S L ++ I + ++++ + N++L + G +P + ++ P Sbjct: 1 MRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLS 60 Query: 69 FAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRST 128 + L + +E+ ++ G S+ L+K + LA+ +I ++ P Sbjct: 61 LFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAGPWSSRH 120 Query: 129 IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT--HKI 186 ++ A+A+ + L + F + + + + + + +F+ R + Sbjct: 121 QDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKGNARPSV 180 Query: 187 YYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 A SG + Q + LN G + + +D I F+ Y + + Sbjct: 181 VVADSGHLTQLRDGSQVVTLNQGTRFEGTAMLRDFRITDFQDYQAIIGHQAVALDPNDTD 240 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 ++ L N + + R+E + +T + L+ + ++ Sbjct: 241 QMDMRTLWNTD----------TDRARAELNWCITLVFTVFMMALM---VVPLSVVNPRQG 287 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 ++ + ++ + F + + + P L+++ + + L ++ + Sbjct: 288 RVLSMLPAMLLYLLFFLIQTSLKSNGGK-GKLDPTLWMWTVNLIYLALAIVLNLW 341 >gi|237712765|ref|ZP_04543246.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262409745|ref|ZP_06086283.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|229447177|gb|EEO52968.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262352398|gb|EEZ01500.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|295084616|emb|CBK66139.1| Predicted permeases [Bacteroides xylanisolvens XB1A] Length = 632 Score = 68.9 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 85/205 (41%), Gaps = 2/205 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +++I++ F+ + +FI + + + ++ + ++++ + Y T++ Sbjct: 5 KKLDIFIVKSFLMLFIGTFFICLFIFMMQFLWRYVDELVGKGLEMSVMAQFFFYSALTLV 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P+ P + + + ELL + G S + +++P+ F L F +N++ Sbjct: 65 PVSLPLAVLLASLITFGNFGERYELLAMKAAGISLLKIMRPLAFFVCGLVGVSFYFQNVV 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P ++ + L + + E +F+ D +K++K N + ++ S Sbjct: 125 GPIAQAKLGTLILSMKQKSPELDIPEGVFYSEIKDYNLKVAKKNRKTGMLYDVLIYSMKD 184 Query: 182 QTH--KIYYAQSGSIDLDRQAIILN 204 +I YA SG +++ L Sbjct: 185 GFEKARIIYADSGRLEMTADKQHLW 209 Score = 46.1 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 14/129 (10%), Positives = 46/129 (35%), Gaps = 4/129 (3%) Query: 229 QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 + +N++ L + +++E+HK++T L ++F I Sbjct: 330 SLTQKQKVISSAVSRAENVANDLGFKKFTMENNDYSIRKHKTEWHKKITISLSCLLFFFI 389 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCIS 347 A ++R+ P+ +S+ + + + + + + ++ ++ Sbjct: 390 G---APLGGIIRKGGLGMPVIVSVLVFIIYYIIDNTGYKMARDGKWIVWMGMWTSSAVLA 446 Query: 348 SIFLLMIKK 356 + + + K Sbjct: 447 PLGIFLTYK 455 >gi|53711884|ref|YP_097876.1| hypothetical protein BF0593 [Bacteroides fragilis YCH46] gi|60680112|ref|YP_210256.1| putative permease [Bacteroides fragilis NCTC 9343] gi|52214749|dbj|BAD47342.1| conserved hypothetical protein [Bacteroides fragilis YCH46] gi|60491546|emb|CAH06298.1| putative permease [Bacteroides fragilis NCTC 9343] Length = 636 Score = 68.9 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 32/205 (15%), Positives = 84/205 (40%), Gaps = 2/205 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +++I++ F+ + +FI + + + ++ + +++L + Y +++ Sbjct: 5 KRLDIFIIKSFLLLFVGTFFICLFIFMMQFLWKYVDELVGKGLEMSVLAQFFFYSALSLV 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PM P + + + ELL + G S + +++P++ L + F +N+I Sbjct: 65 PMSLPLAVLLASLITFGNFGERFELLAMKAAGISLLKIMRPLIVLVFAICCVSFYFQNVI 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ ++ + L + + E +F+ D +K+ + + + I+ Sbjct: 125 GPQAQAKLGTLLISMKQKSPEVDIPEGVFYDEIDGYNLKVQRKDRKTGMLYDVIIYDFSN 184 Query: 182 Q--THKIYYAQSGSIDLDRQAIILN 204 +I A SG +++ L Sbjct: 185 NFDNARIIVADSGRLEMTADKQHLY 209 Score = 43.1 bits (99), Expect = 0.067, Method: Composition-based stats. Identities = 11/98 (11%), Positives = 38/98 (38%), Gaps = 4/98 (4%) Query: 260 YRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVF 319 + ++ E+H+++T L ++F I A ++R+ P+ +S+ + Sbjct: 361 QNDFSIRKHKIEWHRKITISLSCLLFFFIG---APLGGIIRKGGLGMPVIVSVLTFIIYY 417 Query: 320 WGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFLLMIKK 356 + + + + +++ ++ + + K Sbjct: 418 IIDNTGYKMARDGKWIVWMGMWMSSAILAPLGYFLTYK 455 >gi|265765250|ref|ZP_06093525.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|263254634|gb|EEZ26068.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] Length = 636 Score = 68.9 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 32/205 (15%), Positives = 84/205 (40%), Gaps = 2/205 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +++I++ F+ + +FI + + + ++ + +++L + Y +++ Sbjct: 5 KRLDIFIIKSFLLLFVGTFFICLFIFMMQFLWKYVDELVGKGLEMSVLAQFFFYSALSLV 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PM P + + + ELL + G S + +++P++ L + F +N+I Sbjct: 65 PMSLPLAVLLASLITFGNFGERFELLAMKAAGISLLKIMRPLIVLVFAICCVSFYFQNVI 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ ++ + L + + E +F+ D +K+ + + + I+ Sbjct: 125 GPQAQAKLGTLLISMKQKSPEVDIPEGVFYDEIDGYNLKVQRKDRKTGMLYDVIIYDFSN 184 Query: 182 Q--THKIYYAQSGSIDLDRQAIILN 204 +I A SG +++ L Sbjct: 185 NFDNARIIVADSGRLEMTADKQHLY 209 Score = 43.1 bits (99), Expect = 0.069, Method: Composition-based stats. Identities = 11/98 (11%), Positives = 38/98 (38%), Gaps = 4/98 (4%) Query: 260 YRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVF 319 + ++ E+H+++T L ++F I A ++R+ P+ +S+ + Sbjct: 361 QNDFSIRKHKIEWHRKITISLSCLLFFFIG---APLGGIIRKGGLGMPVIVSVLTFIIYY 417 Query: 320 WGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFLLMIKK 356 + + + + +++ ++ + + K Sbjct: 418 IIDNTGYKMARDGKWIVWMGMWMSSAILAPLGYFLTYK 455 >gi|312973921|ref|ZP_07788092.1| conserved hypothetical protein [Escherichia coli 1827-70] gi|310331455|gb|EFP98711.1| conserved hypothetical protein [Escherichia coli 1827-70] Length = 335 Score = 68.9 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 43/331 (12%), Positives = 119/331 (35%), Gaps = 19/331 (5%) Query: 33 LQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNT 92 ++ + N++L + G +P + ++ P + L + +E+ ++ Sbjct: 1 MRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHAC 60 Query: 93 GTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFR 152 G S+ L+K + LA+ +I ++ P ++ A+A+ + L + F + Sbjct: 61 GLSKAVLVKAAMILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQ 120 Query: 153 LDDDLYIKISKYNPNNTLQGIFIVDSRDTQT--HKIYYAQSGSI---DLDRQAIILNDGE 207 + + + + + +F+ R + A SG + Q + LN G Sbjct: 121 ATNGSSVLFIESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGT 180 Query: 208 VHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLET 267 + + +D I F++Y + + ++ L N + + Sbjct: 181 RFEGTALLRDFRITDFQNYQAIIGHQAVALDPNDTDQMDMRTLWNTDTD----------R 230 Query: 268 YRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH 327 R+E + R+T + L+ + ++ ++ + ++ + F + + Sbjct: 231 ARAELNWRITLVFTVFMMALM---VVPLSVVNPRQGRVLSMLPAMLLYLLFFLIQTSLKS 287 Query: 328 KIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + P L+++ + + L ++ + Sbjct: 288 NGGK-GKLDPTLWMWTVNLIYLALAIVLNLW 317 >gi|315922632|ref|ZP_07918872.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313696507|gb|EFS33342.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 632 Score = 68.9 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 84/205 (40%), Gaps = 2/205 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +++I++ F+ + +FI + + + ++ + ++++ + Y T++ Sbjct: 5 KKLDIFIVKSFLMLFIGTFFICLFIFMMQFLWRYVDELVGKGLEMSVMAQFFFYSALTLV 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P+ P + + + ELL + G S + +++P+ F L F +N++ Sbjct: 65 PVSLPLAVLLASLITFGNFGERYELLAMKAAGISLLKIMRPLAFFVCGLVGVSFYFQNVV 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P ++ + L + + E +F+ D +K++K N + ++ + Sbjct: 125 GPIAQAKLGTLILSMKQKSPELDIPEGVFYSEIKDYNLKVAKKNRKTGMLYDVLIYNMKD 184 Query: 182 Q--THKIYYAQSGSIDLDRQAIILN 204 I YA SG +++ L Sbjct: 185 GFENAHIIYADSGRLEMTADKQHLW 209 Score = 45.4 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 14/129 (10%), Positives = 46/129 (35%), Gaps = 4/129 (3%) Query: 229 QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 + +N++ L + +++E+HK++T L ++F I Sbjct: 330 SLTQKQKVLSSAVSRAENVANDLGFKKFTMENNDYSIRKHKTEWHKKITISLSCLLFFFI 389 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCIS 347 A ++R+ P+ +S+ + + + + + + ++ ++ Sbjct: 390 G---APLGGIIRKGGLGMPVIVSVLVFIIYYIIDNTGYKMARDGKWIVWMGMWTSSAVLA 446 Query: 348 SIFLLMIKK 356 + + + K Sbjct: 447 PLGVFLTYK 455 >gi|225848308|ref|YP_002728471.1| permease, YjgP/YjgQ family [Sulfurihydrogenibium azorense Az-Fu1] gi|225643577|gb|ACN98627.1| putative permease, YjgP/YjgQ family [Sulfurihydrogenibium azorense Az-Fu1] Length = 355 Score = 68.9 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 51/364 (14%), Positives = 118/364 (32%), Gaps = 12/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI + FL+ ++ +++++ + S + N++L +P Sbjct: 1 MKILDRYIYEKLTVYFLIVFPAFSLVSVFVELIEILRK--SKVQDFNLILIYILAKLPEN 58 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + V + ++ E+ I G S + ++ +I +S ++ + Sbjct: 59 FYYIVPISLIISAFVVANEIVKSREIYPILLNGISINYISTRIVIFSIFISFLQVLNLEV 118 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTL---QGIFIVD 177 + PK + K + L D I + + I ++ Sbjct: 119 LMPKSNKVYVETYQKLKNQPLEDEKAIAYNLWLRLDEKNFIYFDFFDLEKKVGKEIVLIS 178 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + +L E+ KS +S K + + Sbjct: 179 MDENFLPTNRWEAESFKVESNSLTLLRGKEITVKSIEDVKVSKFDEKKVYVSVDPEKIKK 238 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 ++ + +++ L NY + S+F+++L + P I + ++ Sbjct: 239 LIKEKKPVSITQLYKVAKIAQNY-GYDASYFWSKFYQKLATVISPFILTVFAVGFIW--- 294 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 ++ K + LS + N Y I + +S F LM K K Sbjct: 295 ---RKNKFITLAGFLSTVLYWYGTSIVSAIASVGNIPYYFIFSFDVLFLSIGFYLMFKTK 351 Query: 358 YTKI 361 + ++ Sbjct: 352 HPEL 355 >gi|169656684|ref|YP_001428997.2| putative permease YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|290954454|ref|ZP_06559075.1| putative permease YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica URFT1] gi|295312116|ref|ZP_06802927.1| putative permease YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica URFT1] gi|164551752|gb|ABU62041.2| putative permease YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica FTNF002-00] Length = 353 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 45/357 (12%), Positives = 125/357 (35%), Gaps = 8/357 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + YI R + SFL+ + + ++ L +++ +++ + +++ + +P + Sbjct: 3 LNRIDRYIFRTVFSSFLIVSIIFCILFFIFTYLAQVSNNTANVSNFELIIN-TLIQLPGI 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P C + L+ + N+E++++ + G S + K V+ + ++ S+ + Sbjct: 62 LYTLLPACAMVGALMGLSLLANNSEIIVLRSFGRSTAQIAKGVILVGLIGSVTTMVFGGY 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + + + + + + + +Q + + R Sbjct: 122 IAPILQRQVDTNMVTYNTHDLWFKTPDGFMNIANIEPTNGKAYGIRKFMVQDNKVREIRY 181 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ S ++ R+ I S K I+I+ + + + S + Sbjct: 182 AESATYINDASANVFNIRKIIF-------PASDGQKHINIVTNMTNAVWSNPLPISVAKV 234 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + N + + + ++ +F + + Q L +I L+++ + Sbjct: 235 ITINDNNYLNFSQLTSYMLSNSQAKDSISLKFWQEVFQPLSLMILILLAVPLSIGSTRSS 294 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + +F + I I P + + + + L IK K Sbjct: 295 TLILKLLLGAFFGFAFFIINQIFGPIALILHLPPILGAAGPTVIALILLIYLFIKSK 351 >gi|253572213|ref|ZP_04849617.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|298387973|ref|ZP_06997521.1| permease [Bacteroides sp. 1_1_14] gi|251838393|gb|EES66480.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|298259239|gb|EFI02115.1| permease [Bacteroides sp. 1_1_14] Length = 632 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 84/205 (40%), Gaps = 2/205 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +++I++ F+ + +FI + + + ++ + ++++ + Y T++ Sbjct: 5 KKLDIFIVKSFLMLFIGTFFICLFIFMMQFLWRYVDELVGKGLDMSVIAQFFFYSALTLV 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P+ P + + + ELL + G S + +++P+ F L F +N++ Sbjct: 65 PISLPLAILLASLITFGNFGERYELLAMKAAGISLLKIMRPLAFFVCGLVAVSFYFQNVV 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P ++ + L + + E +F+ D +KI+K N + ++ + Sbjct: 125 GPIAQTKLYTLIISMKQKSPELDIPEGVFYSEIPDYNLKIAKKNRKTGMMYDVLIYNLKD 184 Query: 182 Q--THKIYYAQSGSIDLDRQAIILN 204 I YA SG +++ L Sbjct: 185 GFENAHIIYADSGRMEMTADKQHLW 209 Score = 41.1 bits (94), Expect = 0.29, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 44/97 (45%), Gaps = 4/97 (4%) Query: 246 NLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKI 305 NLS +N + + E+HK++T L ++F I A ++R+ Sbjct: 347 NLSSDINFKSYTMGSHDYSMRKHEIEWHKKITISLSCLLFFFIG---APLGGIIRKGGLG 403 Query: 306 HPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 P+ +S+ + F +++ +K+ ++ ++ + ++ Sbjct: 404 MPVIVSVMV-FIIYYIIDNTGYKMARDGRWVVWMGVW 439 >gi|121730353|ref|ZP_01682711.1| bifunctional aspartokinase/homoserine dehydrogenase I (AKI-HDI) [Vibrio cholerae V52] gi|121627894|gb|EAX60475.1| bifunctional aspartokinase/homoserine dehydrogenase I (AKI-HDI) [Vibrio cholerae V52] Length = 233 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 81/230 (35%), Gaps = 5/230 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + ++ + VS +++L I G +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADVSDGEIPTSMILSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LA++ + + + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + L + + L++ F R D + N L +F+ Sbjct: 122 PWSQDKEAHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLYNVFVAQLAPRD 181 Query: 183 THK-----IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 + + + RQ I L DG + P D I F SY Sbjct: 182 SILPSVMFSHSGDVKELSDGRQIITLYDGTRYEGVPTRVDYMITNFDSYD 231 >gi|225849792|ref|YP_002730026.1| putative permease, YjgP/YjgQ family [Persephonella marina EX-H1] gi|225646703|gb|ACO04889.1| putative permease, YjgP/YjgQ family [Persephonella marina EX-H1] Length = 356 Score = 68.5 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 48/360 (13%), Positives = 121/360 (33%), Gaps = 14/360 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + Y+ + + L+ F+A + ++++ + + L Y +P Sbjct: 1 MRILDRYLYKKLTVYLLVVLPSFSFVAVLAELIEVLRKA--KQLDIYYLSLYILYQLPEK 58 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + + + + E+ I G S +L + + LS I+ + Sbjct: 59 VYYILPISAVIAFILLAKDLIESKEIYPILLNGISLKSLATKLFIFPLFLSFLQIINLEL 118 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLE---ENLFFRLDDDLYIKISKYNPNNTLQGIFIVD 177 I P + ++++ + + N + LD Y+ + N I Sbjct: 119 IMPTAKKEVEKVYSILKNRPPEEEKYLFAYNRWITLDSKSYMYFRFLDFNKREGKDLIFI 178 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 D + + + + ++I++ +G++ S + +FK++ + Sbjct: 179 QFDENYNPVLRIEGNRFKIKGRSILIQNGKIIDLS-DIFSFNYRRFKTFDFPVAVDIKNL 237 Query: 238 IVLKANDQNLSFL-LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 L + +S L L + Y S+F+ +L +I ++ R Sbjct: 238 KKLVKVKKPVSILQLYRSAVIAEKFGYPAGYYWSKFYSKLATVFSALILSIVVFPFLWSR 297 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + +FI+ + ++G ++I E + + L + K Sbjct: 298 KKDK-------LFIAFASIIVYWYGTAFIASMAESGAVPYITVLFVDLVYLMVGLFFLSK 350 >gi|330890526|gb|EGH23187.1| hypothetical protein PSYMO_17673 [Pseudomonas syringae pv. mori str. 301020] Length = 231 Score = 68.5 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 29/218 (13%), Positives = 68/218 (31%), Gaps = 2/218 (0%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + + ++ + ++ + +S +L I G+ +P L Sbjct: 2 IVFRYLSREVLLTLSAVSAVLLVFIMSGRFIKYLAQAASGALDPGVLFLIMGFRLPGFLQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ ++ TG S+ L+ + A L+ + + + Sbjct: 62 VILPLGLFLGILMAYGRLYLESEMTVLAATGMSQQRLLAITMGPATLVGLLVAWLSFSLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFF--RLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ + L K F L F R + + L G+FI + R Sbjct: 122 PQGATQFSLLINKQDAMTEFDTLVPGRFQALRDGTRITYTKELSEDRSQLAGVFISEKRM 181 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDI 218 + + + + +G Sbjct: 182 SGDKSKDNGITVLVAEKGHQEVRPNGSRFLILENGYRY 219 >gi|293369978|ref|ZP_06616545.1| putative membrane protein [Bacteroides ovatus SD CMC 3f] gi|292634896|gb|EFF53418.1| putative membrane protein [Bacteroides ovatus SD CMC 3f] Length = 638 Score = 68.5 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 85/205 (41%), Gaps = 2/205 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +++I++ F+ + +FI + + + ++ + ++++ + Y T++ Sbjct: 11 KKLDIFIVKSFLMLFIGTFFICLFIFMMQFLWRYVDELVGKGLEMSVMAQFFFYSALTLV 70 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P+ P + + + ELL + G S + +++P+ F L F +N++ Sbjct: 71 PVSLPLAVLLASLITFGNFGERYELLAMKAAGISLLKIMRPLAFFVCGLIGVSFYFQNVV 130 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P ++ + L + + E +F+ D +K++K N + ++ S Sbjct: 131 GPIAQAKLGTLILSMKQKSPELDIPEGVFYSEIKDYNLKVAKKNRKTGMLYDVLIYSMKD 190 Query: 182 QTH--KIYYAQSGSIDLDRQAIILN 204 +I YA SG +++ L Sbjct: 191 GFEKARIIYADSGRLEMTADKQHLW 215 Score = 45.8 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 14/129 (10%), Positives = 46/129 (35%), Gaps = 4/129 (3%) Query: 229 QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 + +N++ L + +++E+HK++T L ++F I Sbjct: 336 SLTQKQKVISSAVSRAENVANDLGFKKFTMENNDYSIRKHKTEWHKKITISLSCLLFFFI 395 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCIS 347 A ++R+ P+ +S+ + + + + + + ++ ++ Sbjct: 396 G---APLGGIIRKGGLGMPVIVSVLVFIIYYIIDNTGYKMARDGKWIVWMGMWTSSAVLA 452 Query: 348 SIFLLMIKK 356 + + + K Sbjct: 453 PLGIFLTYK 461 >gi|298483137|ref|ZP_07001317.1| permease [Bacteroides sp. D22] gi|298270654|gb|EFI12235.1| permease [Bacteroides sp. D22] Length = 632 Score = 68.5 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 85/205 (41%), Gaps = 2/205 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +++I++ F+ + +FI + + + ++ + ++++ + Y T++ Sbjct: 5 KKLDIFIVKSFLMLFIGTFFICLFIFMMQFLWRYVDELVGKGLEMSVMAQFFFYSALTLV 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P+ P + + + ELL + G S + +++P+ F L F +N++ Sbjct: 65 PVSLPLAVLLASLITFGNFGERYELLAMKAAGISLLKIMRPLAFFVCGLIGVSFYFQNVV 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P ++ + L + + E +F+ D +K++K N + ++ S Sbjct: 125 GPIAQAKLGTLILSMKQKSPELDIPEGVFYSEIKDYNLKVAKKNRKTGMLYDVLIYSMKD 184 Query: 182 QTH--KIYYAQSGSIDLDRQAIILN 204 +I YA SG +++ L Sbjct: 185 GFEKARIIYADSGRLEMTADKQHLW 209 Score = 45.8 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 14/129 (10%), Positives = 46/129 (35%), Gaps = 4/129 (3%) Query: 229 QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 + +N++ L + +++E+HK++T L ++F I Sbjct: 330 SLTQKQKVISSAVSRAENVANDLGFKKFTMENNDYSIRKHKTEWHKKITISLSCLLFFFI 389 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCIS 347 A ++R+ P+ +S+ + + + + + + ++ ++ Sbjct: 390 G---APLGGIIRKGGLGMPVIVSVLVFIIYYIIDNTGYKMARDGKWIVWMGMWTSSAVLA 446 Query: 348 SIFLLMIKK 356 + + + K Sbjct: 447 PLGIFLTYK 455 >gi|57167826|ref|ZP_00366966.1| conserved hypothetical integral membrane protein, putative [Campylobacter coli RM2228] gi|57020948|gb|EAL57612.1| conserved hypothetical integral membrane protein, putative [Campylobacter coli RM2228] Length = 341 Score = 68.5 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 51/345 (14%), Positives = 110/345 (31%), Gaps = 12/345 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+L + L + I ++ +Q L SS + LLK+ G+++P + Sbjct: 1 MKLALRYVLNQFLSTNLSIFFVLFTIVSMVFFIQLAKLTSSIEINFADLLKLYGFMLPRI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P F + T L ++R E +++ G S L K L +A L+S + I + Sbjct: 61 LIFTLPIAFFIALTLALFRLSRENESIVLFTLGFSPKILAKFFLKIAALVSALMLIIALV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + F+Y R + + + + ++ Sbjct: 121 MIPIVFELQDNFVNFKKTQVKFNYKTGEFGQRFLEWMIFIEKQESDRYENIIMYHPKRNI 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ A+ + + + + + + + N + Sbjct: 181 EDKEQLIIAKEATAQRNEDSFAFKLSNGKMYNFENGQTLFIGNFDKLIVNTQFNDQNLQT 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K + + L EF +T LFP+ L ++ Sbjct: 241 KKFYEYWNDLNTNPKRAK------------EFVIYVTIALFPLASTLFALSFGIVTYRYE 288 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC 345 + +F +++ FG+ FS + + + + Sbjct: 289 KGFIYFGMFGVIAVYFGLLSSFSQPPILACIGIFALSFIASIVCF 333 >gi|297517382|ref|ZP_06935768.1| hypothetical protein EcolOP_07050 [Escherichia coli OP50] Length = 340 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 60/349 (17%), Positives = 135/349 (38%), Gaps = 18/349 (5%) Query: 17 LMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNV 76 ++ F++FI + + ++ T +L+++L I Y + L M+ P + Sbjct: 1 MIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIALEMLLPVGLYVSVGVT 60 Query: 77 LTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKA 136 L M ++E+ I G S L K VL+LAI LSIF+ + P + I QL ++ Sbjct: 61 LGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMYGRPWAYAQIYQLEQQS 120 Query: 137 QLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDL 196 Q L L F D+ I + +N ++ + +I+ A+S + Sbjct: 121 QSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTSTANRTRIFRARSVDVVD 180 Query: 197 ---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNP 253 ++ ++L++G + +D + +++ L + S V + + Sbjct: 181 PSPEKPTVMLHNGTAYLIDHQGRDDNEQIYRNLQLHLNPLDQSPNVKRKAKSVTELARSV 240 Query: 254 NPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLS 313 P + +E R ++ L ++ ++A + ++ + + Sbjct: 241 FPAD-----------HAELQWRQSRGLTALLMA---LLAISLSRVKPRQGRFSTLLPLTL 286 Query: 314 ISFGVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIKKKYTKI 361 + +F+G + IP L+L + L+++ + ++ + Sbjct: 287 LFIAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMGLLMLVARDFSLL 335 >gi|153820564|ref|ZP_01973231.1| conserved permease [Vibrio cholerae NCTC 8457] gi|126508893|gb|EAZ71487.1| conserved permease [Vibrio cholerae NCTC 8457] Length = 236 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 30/199 (15%), Positives = 75/199 (37%), Gaps = 1/199 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I + + + V ++ +I+ ++++ V + L L IP + Sbjct: 3 KILDWYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGEGSYDLLQALLFVVLSIPRDV 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L ++ ++EL+++ G S++ + VL AI L I + + Sbjct: 63 EMFFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIIVTLLGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + + + + D + +I I+K + + Sbjct: 123 APQAQ-KMARDMRAFATSGGAIMSVRTGVWARDANDFIFIAKVENEHLYGLNLWRFDENK 181 Query: 182 QTHKIYYAQSGSIDLDRQA 200 + + +++ + + Sbjct: 182 KLSTVIFSEQVDYVANNEW 200 >gi|56708377|ref|YP_170273.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis SCHU S4] gi|89256770|ref|YP_514132.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica LVS] gi|110670847|ref|YP_667404.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis FSC198] gi|115315161|ref|YP_763884.1| hypothetical protein FTH_1435 [Francisella tularensis subsp. holarctica OSU18] gi|167010911|ref|ZP_02275842.1| hypothetical protein Ftulh_09398 [Francisella tularensis subsp. holarctica FSC200] gi|187931970|ref|YP_001891955.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. mediasiatica FSC147] gi|224457507|ref|ZP_03665980.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis MA00-2987] gi|254371000|ref|ZP_04987003.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis FSC033] gi|254875200|ref|ZP_05247910.1| permease yjgP/yjgQ family protein [Francisella tularensis subsp. tularensis MA00-2987] gi|56604869|emb|CAG45953.1| Permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis SCHU S4] gi|89144601|emb|CAJ79920.1| Permease YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica LVS] gi|110321180|emb|CAL09336.1| Permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis FSC198] gi|115130060|gb|ABI83247.1| conserved hypothetical protein [Francisella tularensis subsp. holarctica OSU18] gi|151569241|gb|EDN34895.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis FSC033] gi|187712879|gb|ACD31176.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. mediasiatica FSC147] gi|254841199|gb|EET19635.1| permease yjgP/yjgQ family protein [Francisella tularensis subsp. tularensis MA00-2987] gi|282159996|gb|ADA79387.1| hypothetical protein NE061598_09765 [Francisella tularensis subsp. tularensis NE061598] Length = 353 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 45/357 (12%), Positives = 124/357 (34%), Gaps = 8/357 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + YI R + SFL+ + + ++ L +++ +++ + +++ + +P + Sbjct: 3 LNRIDRYIFRTVFSSFLIVSIIFCILFFIFTYLAQVSNNTANVSNFELIIN-TLIQLPGI 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P C + L+ + N+E++++ + G S + K V+ + ++ S+ + Sbjct: 62 LYTLLPACAMVGALMGLSLLANNSEIIVLRSFGRSTAQIAKGVILVGLIGSVTTMVFGGY 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + + + + + + + +Q + + R Sbjct: 122 IAPILQRQVDTNMVTYNTHDLWFKTPDGFMNIANIEPTNGKAYGIRKFMVQDNKVREIRY 181 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ S ++ R+ I S K I I+ + + + S + Sbjct: 182 AESATYINDASANVFNIRKIIF-------PASDGQKHIDIVTNMTNAVWSNPLPISVAKV 234 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + N + + + ++ +F + + Q L +I L+++ + Sbjct: 235 ITINDNNYLNFSQLTSYMLSNSQAKDSISLKFWQEVFQPLSLMILILLAVPLSIGSTRSS 294 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + +F + I I P + + + + L IK K Sbjct: 295 TLILKLLLGAFFGFAFFIINQIFGPIALILHLPPILGAAGPTVIALILLIYLFIKSK 351 >gi|305432149|ref|ZP_07401315.1| conserved hypothetical integral membrane protein [Campylobacter coli JV20] gi|304444814|gb|EFM37461.1| conserved hypothetical integral membrane protein [Campylobacter coli JV20] Length = 341 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 51/345 (14%), Positives = 110/345 (31%), Gaps = 12/345 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+L + L + I ++ +Q L SS + LLK+ G+++P + Sbjct: 1 MKLALRYVLNQFLSTNLSIFFVLFTIVSMVFFIQLAKLTSSIEINFVDLLKLYGFMLPRI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P F + T L ++R E +++ G S L K L +A L+S + I + Sbjct: 61 LIFTLPIAFFIALTLALFRLSRENESIVLFTLGFSPKILAKFFLKIAALVSALMLIIALV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + F+Y R + + + + ++ Sbjct: 121 MIPIVFELQDNFVNFKKTQVKFNYKTGEFGQRFLEWMIFIEKQESDRYENIIMYHPKRNI 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ A+ + + + + + + + N + Sbjct: 181 EDKEQLIIAKEATAQRNEDSFAFKLSNGKMYNFENGQTLFIGNFDKLIVNTQFNDQNLQT 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K + + L EF +T LFP+ L ++ Sbjct: 241 KKFYEYWNDLNTNPKRAK------------EFVIYVTIALFPLASTLFALSFGIVTYRYE 288 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC 345 + +F +++ FG+ FS + + + + Sbjct: 289 KGFIYFGMFGVIAVYFGLLSSFSQPPILACIGIFALSFIASIVCF 333 >gi|257487385|ref|ZP_05641426.1| hypothetical protein PsyrptA_29198 [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 205 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 29/199 (14%), Positives = 64/199 (32%), Gaps = 1/199 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + YI + + + L I+ + + + + + S T +L L P Sbjct: 1 MVKLDRYIGKSVLLAILAVLGIILGLVSLFAFIDEMGDI-SDTYTLADALSYVMLTAPRR 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L ++ ++EL I+ G S ++ V+ +LL + + Sbjct: 60 VYDTLPMAALIGCLIGLGTLASSSELTIMRAAGVSIGRIVWAVMKPMLLLMVAGVLVGEY 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + AQ + L+ R D+ + L Sbjct: 120 VAPYAENQAQAARSLAQGSGDAQSARHGLWHRQGDEFIHINTVQPNGLMLGVTRYRFDDQ 179 Query: 181 TQTHKIYYAQSGSIDLDRQ 199 +A+ + D Sbjct: 180 RHMLTSSFAKEANFKTDYW 198 >gi|254457924|ref|ZP_05071351.1| permease YjgP/YjgQ [Campylobacterales bacterium GD 1] gi|207085317|gb|EDZ62602.1| permease YjgP/YjgQ [Campylobacterales bacterium GD 1] Length = 339 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 59/358 (16%), Positives = 128/358 (35%), Gaps = 19/358 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+ + FL + + IA VI +++ + +L ++K+ +++P + Sbjct: 1 MDRLRKYIINNLYMIFLSMFMPLFAIASVIFMIKLATYTAVIQLTLWDMVKLYLFVLPEI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P F + T L ++ + E++++ G +IK + A LLS L + + Sbjct: 61 LFYTLPLTFFIAATLSLFRLSTDNEMVVLFALGIHPKFIIKTLFKPAALLSALLMFNFLV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + F+ D L + N I+ +++ Sbjct: 121 LFPHATTLSSNFVSYKKSEAKFNLSASEFGHSFGDWLLYI--GKDNENETYSDVILFNKN 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + I A+ I D + L E S ++ S + F + + + Sbjct: 179 KKEEIIISAKRAEIINDAGILRLKLIEGEGYSYSKEEFSQIDFDTMYINDTMRTDLAVYR 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + LS + H +T L + F LIS+ +V Sbjct: 239 TPLEYWLSNDRKESKT----------------HMMITDTLLSL-FPLISLFLVVSIGVVH 281 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 R + I++ L + +++G + + K ++ +L I+ I +++ Sbjct: 282 VRHQKGRIYLYLFLGVLLYYGATLGLQKSLVYYTIPTVVITWLIVTYIIYKKNIVERF 339 >gi|254372627|ref|ZP_04988116.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. novicida GA99-3549] gi|151570354|gb|EDN36008.1| permease YjgP/YjgQ family protein [Francisella novicida GA99-3549] Length = 353 Score = 68.1 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 45/357 (12%), Positives = 124/357 (34%), Gaps = 8/357 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + YI R + SFL+ + + ++ L +++ +++ + +++ + +P + Sbjct: 3 LNRIDRYIFRTVFSSFLIVSIIFCILFFIFTYLAQVSNNTANVSNFELIIN-TLIQLPGI 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P C + L+ + N+E++++ + G S + K V+ + ++ S+ + Sbjct: 62 LYTLLPACAMVGALMGLSLLANNSEIIVLRSFGRSTAQIAKGVILVGLIGSVTTMVFGGY 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + + + + + + + +Q + + R Sbjct: 122 IAPILQRQVDTNMVTYNTHDLWFKTPDGFMNISNIEPTQGKAYGIRKFMVQDNKVREIRY 181 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ S ++ R+ I S K I I+ + + + S + Sbjct: 182 AESATYINDASANVFNIRKIIF-------PASDGQKHIDIVTNMTNAVWSNPIPISVAKV 234 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + N + + + ++ +F + + Q L +I L+++ + Sbjct: 235 ITINDNDYLNFSQLTSYMLSNSQAKDSISLKFWQEVFQPLSLMILILLAVPLSIGSTRSS 294 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + +F + I I P + + + + L IK K Sbjct: 295 TLILKLLLGAFFGFAFFIINQIFGPIALILHLPPILGAAGPTVIALILLIYLFIKSK 351 >gi|315617675|gb|EFU98281.1| conserved hypothetical protein [Escherichia coli 3431] Length = 335 Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 44/331 (13%), Positives = 118/331 (35%), Gaps = 19/331 (5%) Query: 33 LQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNT 92 ++ + S N++L + G +P + ++ P + L + +E+ ++ Sbjct: 1 MRILGAAVDSDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHAC 60 Query: 93 GTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFR 152 G S+ L+K + LA+ +I ++ P ++ A+A+ + L + F + Sbjct: 61 GLSKAVLVKAAMILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQ 120 Query: 153 LDDDLYIKISKYNPNNTLQGIFIVDSRDTQT--HKIYYAQSGSI---DLDRQAIILNDGE 207 + + + + + +F+ R + A SG + Q + LN G Sbjct: 121 ATNGSSVLFIESVDGSNFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGT 180 Query: 208 VHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLET 267 + + +D I F+ Y + + ++ L N + Sbjct: 181 RFEGTALLRDFRITDFQDYQAIIGHHAVALDPNDTDQMDMRTLWNTD----------TTR 230 Query: 268 YRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH 327 R+E + R+T + L+ + ++ ++ + ++ + F + + Sbjct: 231 ARAELNWRITLIFTVFMMALM---VVPLSVVNPRQGRVLSMLPAMLLYLLFFLIQTSLKS 287 Query: 328 KIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + P L+++ + + L ++ + Sbjct: 288 NGGK-GKLDPTLWMWTVNLIYLALAIVLNLW 317 >gi|291327104|ref|ZP_06127004.2| inner membrane protein YjgP [Providencia rettgeri DSM 1131] gi|291311564|gb|EFE52017.1| inner membrane protein YjgP [Providencia rettgeri DSM 1131] Length = 343 Score = 67.7 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 47/336 (13%), Positives = 121/336 (36%), Gaps = 19/336 (5%) Query: 24 VFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRN 83 + I + + + + N++L + G +P + ++ P + + + Sbjct: 1 MLIFFSQKSIDILGAAVQGNIPSNLVLPLLGLGVPEMAQLILPLSLFLGLLMTYSKLYTE 60 Query: 84 TELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFS 143 +E+ ++ G + L+K L LA++ ++ + + P +Q+ A A+ + Sbjct: 61 SEITVMHACGLGKSVLVKAALVLAVITAMVAVANITWMLPWSSQYQEQVLADAKANPGLA 120 Query: 144 YLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ--THKIYYAQSGSIDLDRQAI 201 + E F D Y+ + + +F+ R + A SG + D Sbjct: 121 AMVEGQFKTTKDGNYVLYIGDVKGSNFKNVFLAQLRAANEQRPSVVVADSGYMKEDPDGR 180 Query: 202 ---ILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNP 258 +LN+G + + + +D I F +Y + + T + +N+ L + Sbjct: 181 QVVVLNEGTRYEGTALLRDFRITDFVNYQAIVDHQTAETRSDRVEQKNMLQLWSE----- 235 Query: 259 NYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGV 318 +EFH RLT V+ L+ + ++ ++ + ++ + Sbjct: 236 -----NTPEVNAEFHWRLTIVFSVVVMALM---VVPLSEVNPRQGRVLSMLPAMLLYLIF 287 Query: 319 FWGFSYIIHKIEQNPYYI-PILYLFLFCISSIFLLM 353 F S + + ++ ++ + +++ Sbjct: 288 FLLQSTLRNSADKGDLDPRYTMWAVNVGYLILAIVL 323 >gi|260891451|ref|ZP_05902714.1| hypothetical protein GCWU000323_02662 [Leptotrichia hofstadii F0254] gi|260858834|gb|EEX73334.1| hypothetical protein GCWU000323_02662 [Leptotrichia hofstadii F0254] Length = 222 Score = 67.7 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 27/206 (13%), Positives = 59/206 (28%), Gaps = 9/206 (4%) Query: 159 IKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDI 218 I + N F++ ++ + + D I L + + Sbjct: 17 FYIDEVNNEKATAKNFLIINKRGNNPYPIVFLAENAKFDPGIIRLKKVKGYAFDKDGNSQ 76 Query: 219 SIMKFKSYTLQTES---ANSSTIVLKANDQNLSFLLNPNPNNPN--YRPELLETYRSEFH 273 ++ + + N + + N+ L N E + E + Sbjct: 77 VSALYQEQEIPITTFFRENKKEVKKSRKEMNIKELNEFYKQNIKNPEEKETALKAQVEIY 136 Query: 274 KRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP 333 +RL + + R+ + ISL + FG SY + +N Sbjct: 137 QRLIGPFAS---TFLCWLGVLLSVGHRRSGRGISFGISLIVIFGYIGMASYAKIMVLKNN 193 Query: 334 YYI-PILYLFLFCISSIFLLMIKKKY 358 +++ F + + + KKY Sbjct: 194 VPANIAMWVPNFVLFIMCIYFSIKKY 219 >gi|313203466|ref|YP_004042123.1| permease yjgp/yjgq family protein [Paludibacter propionicigenes WB4] gi|312442782|gb|ADQ79138.1| permease YjgP/YjgQ family protein [Paludibacter propionicigenes WB4] Length = 493 Score = 67.7 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 76/202 (37%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI + FLM+ L +FI + + + ++ + ++L + Y I +V+ Sbjct: 5 KKIDSYIFKRFITQFLMTFLICIFILLMQFLWKHVSELIGKGVGWSVLAEFFIYAIFSVV 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PM P + + ++ N EL + G S +I+P++ + + F N + Sbjct: 65 PMALPLAILLASLMTFGNLGENFELTAMKAAGISLFRIIRPLIIFISFVCVGAFFFSNYV 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P ++ + L + + F+ ++ I + + + S Sbjct: 125 LPVAQTKLYTLVISLKQKSPELDIPTGEFYSGIPNVQIYVKDKKDHILKNVMIYNFSGGF 184 Query: 182 QTHKIYYAQSGSIDLDRQAIIL 203 + ++ A SG + + Sbjct: 185 ENAEVTVADSGKVQFTEDKKYI 206 Score = 43.1 bits (99), Expect = 0.065, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 43/111 (38%), Gaps = 4/111 (3%) Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 +S + N + + + E H++ T +IF I A A++R+ Sbjct: 348 MSETVEYNKTMIGSQVTYITKHEIERHRKFTLSFACLIFFFIG---APLGAIIRKGGLGM 404 Query: 307 PIFISLSISFGVFWGFSYIIHKIEQNPYYIP-ILYLFLFCISSIFLLMIKK 356 P+ IS+ + + + +++ + ++L F + I + + K Sbjct: 405 PVVISVIMFIIYYIIDNTGYKMVKEGLWLSYQGMWLSSFVLLPIGIFLTYK 455 >gi|260642684|ref|ZP_05416897.2| putative permease [Bacteroides finegoldii DSM 17565] gi|260621031|gb|EEX43902.1| putative permease [Bacteroides finegoldii DSM 17565] Length = 632 Score = 67.7 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 85/205 (41%), Gaps = 2/205 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +++I++ F+ + +FI + + + ++ + ++++ + Y T++ Sbjct: 5 KKLDIFIVKSFFMLFIGTFFICLFIFMMQFLWRYVDELVGKGLEMSVMAQFFFYSALTLV 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P+ P + + + ELL + G S + +++P++F L F +N++ Sbjct: 65 PVSLPLAVLLASLITFGNFGERYELLAMKAAGISLLKIMRPLVFFVCGLVGVSFYFQNVV 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P ++ + L + + E +F+ D +KI+K + + ++ + Sbjct: 125 GPIAQAKLGTLILSMKQKSPELDIPEGVFYSEIPDYNLKIAKKDRKTGMLYDVLIYNLKD 184 Query: 182 Q--THKIYYAQSGSIDLDRQAIILN 204 I YA SG +++ L Sbjct: 185 GFENAHIIYADSGRLEMTADKQHLW 209 Score = 45.4 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 14/129 (10%), Positives = 46/129 (35%), Gaps = 4/129 (3%) Query: 229 QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 + +N++ L + +++E+HK++T L ++F I Sbjct: 330 PLTQKQKVISAALSRAENMASDLTFKSYTMESNDYSIRKHKTEWHKKITISLSCLLFFFI 389 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCIS 347 A ++R+ P+ +S+ + + + + + + ++ ++ Sbjct: 390 G---APLGGIIRKGGLGMPVIVSVLVFIIYYIIDNTGYKMARDGKWIVWMGMWTSSAVLA 446 Query: 348 SIFLLMIKK 356 + + + K Sbjct: 447 PLGIFLTYK 455 >gi|222110917|ref|YP_002553181.1| permease yjgp/yjgq family protein [Acidovorax ebreus TPSY] gi|221730361|gb|ACM33181.1| permease YjgP/YjgQ family protein [Acidovorax ebreus TPSY] Length = 363 Score = 67.7 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 41/341 (12%), Positives = 117/341 (34%), Gaps = 16/341 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ I + + R+F + + +V + + +++ + S + + + ++ + G+ + LP Sbjct: 2 LFDSSIRKELARTFGATLVVLVTVVMTMMLIRTLGQASRGSVNPSDVMLVMGFTVLGQLP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + + L+ M R++E++I + G ++L+ P+ + + + + ++ Sbjct: 62 TILSLSLFVTVVGALSRMYRDSEMVIWFSAGRGLMSLLAPLFRFSWPVMLTIAALSLVVW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIKISKYNPNNTLQGIFIVDSRDT 181 P I++L + + + F + I K P+ + + + Sbjct: 122 PWANRQIQELKTQYEQRSDVDRIAPGEFQESSNGSRVFFIDKDAPDANSASNVFIATNEP 181 Query: 182 QTHKIYYAQSGS--IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + AQS I + +L++G+ + + +F Y + + Sbjct: 182 NRETVTSAQSARLEIRNGERMALLSNGQRLETLRDKPGLRVSEFAEYGTLVGGGSQNDPE 241 Query: 240 L-KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 ++ L++ + +++E R+ L + F + A Sbjct: 242 AASIKTRDTWELVS----------DPQPRHQAELGWRIGMALAALNFV--VLGLAVAVVN 289 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL 339 R + +F + +P + Sbjct: 290 PRAGRSTSLVFALFAFVVYYNLMTVGQTWIGVGRLGLLPFM 330 >gi|170766592|ref|ZP_02901045.1| putative permease [Escherichia albertii TW07627] gi|170124030|gb|EDS92961.1| putative permease [Escherichia albertii TW07627] Length = 335 Score = 67.7 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 43/331 (12%), Positives = 117/331 (35%), Gaps = 19/331 (5%) Query: 33 LQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNT 92 ++ + N++L + G +P + ++ P + L + +E+ ++ Sbjct: 1 MRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHAC 60 Query: 93 GTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFR 152 G S+ L+K + LA+ +I ++ P ++ A+A+ + L + F + Sbjct: 61 GLSKAVLVKAAMILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQ 120 Query: 153 LDDDLYIKISKYNPNNTLQGIFIVDSRDTQT--HKIYYAQSGSI---DLDRQAIILNDGE 207 + + + + + +F+ R + A SG + Q + LN G Sbjct: 121 ATNGSSVLFIESVDGSNFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGT 180 Query: 208 VHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLET 267 + + +D I F+ Y + + ++ L N + Sbjct: 181 RFEGTALLRDFRITDFQDYQAIIGHQAVALDPNDTDQMDMRTLWNTD----------TTR 230 Query: 268 YRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH 327 R+E + R+T + L+ + ++ ++ + ++ + F + + Sbjct: 231 ARAELNWRITLIFNVFMMALM---VVPLSVVNPRQGRVLSMLPAMLLYLLFFLIQTSLKS 287 Query: 328 KIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + P L+++ + + L ++ + Sbjct: 288 NGGK-GKLDPTLWMWTVNLIYLVLAIVLNLW 317 >gi|121594280|ref|YP_986176.1| permease [Acidovorax sp. JS42] gi|120606360|gb|ABM42100.1| permease YjgP/YjgQ family protein [Acidovorax sp. JS42] Length = 363 Score = 67.7 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 41/341 (12%), Positives = 117/341 (34%), Gaps = 16/341 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 F+ I + + R+F + + +V + + +++ + S + + + ++ + G+ + LP Sbjct: 2 LFDSSIRKELARTFGATLVVLVTVVMTMMLIRTLGQASRGSVNPSDVMLVMGFTVLGQLP 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + + L+ M R++E++I + G ++L+ P+ + + + + ++ Sbjct: 62 TILSLSLFVTVVGALSRMYRDSEMVIWFSAGRGLMSLLAPLFRFSWPVMLTIAALSLVVW 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDD-DLYIKISKYNPNNTLQGIFIVDSRDT 181 P I++L + + + F + I K P+ + + + Sbjct: 122 PWANRQIQELKTQYEQRSDVDRIAPGEFQESSNGSRVFFIDKDAPDANSASNVFIATNEP 181 Query: 182 QTHKIYYAQSGS--IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + AQS I + +L++G+ + + +F Y + + Sbjct: 182 NRETVTSAQSARLEIRNGERMALLSNGQRLETLRDKPGLRVSEFAEYGTLVGGGSQNDPE 241 Query: 240 L-KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 ++ L++ + +++E R+ L + F + A Sbjct: 242 AASIKTRDTWELVS----------DPQPRHQAELGWRIGMALAALNFV--VLGLAVAVVN 289 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL 339 R + +F + +P + Sbjct: 290 PRAGRSTSLVFALFAFVVYYNLMTVGQTWIGVGRLGLLPFM 330 >gi|262382624|ref|ZP_06075761.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262295502|gb|EEY83433.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 658 Score = 67.7 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 30/183 (16%), Positives = 75/183 (40%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K ++L+ FLM+ +FI + + + I+ + + +L ++ Y ++ Sbjct: 5 KRLYTFMLQTFLPLFLMTFGICLFIVLMQFLWRYIDDMVGKGLGIPVLAEMFMYAALFLV 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PM P + + ++ ELL + + G S I +++P++ + +S+ F +N + Sbjct: 65 PMALPLAILLASLMTFGNLGERLELLAMKSAGVSLIHIMRPLIVTLLFVSVGAFFFQNNV 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + L + + E F++ + + K +P + L ++ Sbjct: 125 MPVVQVKLYTLLYSMRQKSPELDIPEGSFYKDIPGFNVYVKKKDPKDGLLKDVMIYDYSE 184 Query: 182 QTH 184 + Sbjct: 185 GFN 187 Score = 44.6 bits (103), Expect = 0.026, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 37/95 (38%), Gaps = 4/95 (4%) Query: 263 ELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGF 322 + + +E+HK+ T ++F I A A++R+ P+ IS+ + + Sbjct: 381 YKVRRHLTEWHKKFTVSFACIMFFFIG---APLGAIIRKGGLGVPVVISVILFIFYYIID 437 Query: 323 SYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIKK 356 + + ++L ++ + + + K Sbjct: 438 NMGFKMARDGVWDAWEGMWLSSVVLTPMGIFLTYK 472 >gi|225851251|ref|YP_002731485.1| putative permease, YjgP/YjgQ family [Persephonella marina EX-H1] gi|225646479|gb|ACO04665.1| putative permease, YjgP/YjgQ family [Persephonella marina EX-H1] Length = 337 Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 56/356 (15%), Positives = 112/356 (31%), Gaps = 19/356 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YI + I ++FL+ + Q+L +++ + K+ + + Sbjct: 1 MKILYRYITKNILKNFLVLIAVFSIVIVSSQLLHLPSVM--YHADITNFFKLLFLMNLSF 58 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L F F + T + +M N E+ + + G ++ LIKP++ +++++ I Sbjct: 59 LKFQLLFAFFLSTALLGFNMRENREIYAVYSAGITKGQLIKPLVVISLIIFTVSLIVSMF 118 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + ++E FF+L D++ I K N + Sbjct: 119 VVPYANRERAKFITLNIKRYFLDAVQEKNFFQLSDNVTIYTEKKEGNR------FENVFI 172 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + D L G + +I + + + E +I Sbjct: 173 YNRERGQTISAKEAFFDTTTFFLKKGYIQIPDEKGFNILRFESYRFNIDVEYLKKYSIED 232 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N L + S R+ LFP F I ++ + Sbjct: 233 YRNKDLLM--------IIKKSKKDKNRALSVLTDRI---LFPFPFLFIGVLGFMVGIKTQ 281 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + K L + F +I + ++ L SSI +K Sbjct: 282 KGKDSVIATTVLISIVYLVLNFYFIKLIGKGKIDPSVYAFVLLAYFSSITYYFYRK 337 >gi|315638467|ref|ZP_07893644.1| conserved hypothetical integral membrane protein [Campylobacter upsaliensis JV21] gi|315481458|gb|EFU72085.1| conserved hypothetical integral membrane protein [Campylobacter upsaliensis JV21] Length = 341 Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 50/345 (14%), Positives = 112/345 (32%), Gaps = 12/345 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YIL + L L + I ++ +Q NL SS S L K+ G+++P + Sbjct: 1 MKLIFKYILNQFLGTHLSIFLVLFGIVSMVFFIQIANLTSSIEISFLDLFKLYGFMLPRI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P F + T L +++ E ++ G + + + + L +A LS+ + + Sbjct: 61 LIFTLPLAFFVALTLALYRLSKENESVVFFTLGFTPLKMAQFFLKIATFLSVLMLGVALV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P K + + F+Y + D + + ++ S D Sbjct: 121 MIPIVYQLQKNFVDYKKTQIKFNYKTGEFGQKFLDWMIFIQDEKEGGYENIIMYHPKSTD 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ A+ +++ + + + + + + L + S + Sbjct: 181 NLKEQLIIAKEANLERSNEGFAFRLSAGKMYNFDADEALFIG-EFENLVVNTKFSDNLGQ 239 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 +N N + EF + LFP+ L ++ Sbjct: 240 TKAFYEYWDDINTNADKAR-----------EFVMYVCISLFPLASTLFALSFGIVTYRYE 288 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC 345 + +F +++ FG+ + + + Sbjct: 289 KGFIYLGMFGVIAVYFGLLSSLYKPPLLMSFLIFSFAFAASIICF 333 >gi|209363910|ref|YP_001424259.2| hypothetical membrane spanning protein [Coxiella burnetii Dugway 5J108-111] gi|207081843|gb|ABS76872.2| hypothetical membrane spanning protein [Coxiella burnetii Dugway 5J108-111] Length = 372 Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 48/342 (14%), Positives = 120/342 (35%), Gaps = 21/342 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ + I + L + L ++ I Q + +N ++ ++ +++I +P +L Sbjct: 4 IVFRYLCKEILGTLLATTLILLIIFMTNQFVHYLNDAAAGKITVKAVMEIMSLQVPLLLG 63 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + L M + E++I+ G SR ++ ++ LA + + + +E Sbjct: 64 YLLPLGLFLGGLFALGRMAVDHEMVILTACGVSRAQIVGMLIVLATFIGVIVAWLMLSVE 123 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV------ 176 PK + ++ A + + F L + + + ++ + + + Sbjct: 124 PKMQWYRVKILKDAVATASLEKIVPGRFQPLSSNGQVFYAGGVNDHHQKMLNVFLAQSET 183 Query: 177 --DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + A S I+ +G + P +MKF Y ++ S Sbjct: 184 AGGKQRWDLVSADQAGEYSTAKGENFILFKNGFRYVGIPGELKYDVMKFGEYGIRLTSP- 242 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + I + + S L + + + +E R+ L +F L+ + Sbjct: 243 AMDITGRVDAMPTSKLWHLHSKDLKAA--------AELQWRIAMPLSVWLFALLIVSL-- 292 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 ++ K + ++ I G + F ++ ++ Sbjct: 293 -SEANPRKGKFAQMLPAVLIYIG-YANFMFLGRTWIEDGVIS 332 >gi|183179747|ref|ZP_02957958.1| inner membrane protein YjgQ [Vibrio cholerae MZO-3] gi|183013158|gb|EDT88458.1| inner membrane protein YjgQ [Vibrio cholerae MZO-3] Length = 228 Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 19/206 (9%), Positives = 63/206 (30%), Gaps = 1/206 (0%) Query: 151 FRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHR 210 + D + +I I+K + + + +++ + + ++ + Sbjct: 23 WARDANDFIFIAKVENEQLYGLNLWRFDENKKLSTVIFSEQVDYVANNEWLMKDAVLTRL 82 Query: 211 KSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRS 270 + I + + + + +K + +L+ L + + + Y Sbjct: 83 VNDIEISKESLPEYRWRTSLAPDKLAVVTVKPEELSLTGL-SDYVHYLKASEQDSSRYEL 141 Query: 271 EFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIE 330 +++TQ + + L+++ + +F + F + + Sbjct: 142 ALWRKVTQPISIAVMMLMALSFIFGPLRSVTMGARILSGVIAGFTFYISSEFFGPLSLVY 201 Query: 331 QNPYYIPILYLFLFCISSIFLLMIKK 356 P L L ++ L+ +K Sbjct: 202 GLPPLFGALAPSLVFLAIALGLLGRK 227 >gi|118497254|ref|YP_898304.1| membrane protein of unknown function [Francisella tularensis subsp. novicida U112] gi|118423160|gb|ABK89550.1| conserved membrane protein of unknown function [Francisella novicida U112] Length = 353 Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 45/357 (12%), Positives = 124/357 (34%), Gaps = 8/357 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + YI R + SFL+ + + ++ L +++ +++ + +++ + +P + Sbjct: 3 LNRIDRYIFRTVFSSFLIVSIIFCILFFIFTYLAQVSNNTANVSNFELIIN-TLIQLPGI 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P C + L+ + N+E++++ + G S + K V+ + ++ S+ + Sbjct: 62 LYTLLPACAMVGALMGLSLLANNSEIIVLRSFGRSTAQIAKGVILVGLIGSVTTMVFGGY 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + + + + + + + +Q + + R Sbjct: 122 IAPILQRQVDTNMVTYNTHDLWFKTPDGFMNIANIEPTKGKAYGIRKFMVQDNKVREIRY 181 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ S ++ R+ I S K I I+ + + + S + Sbjct: 182 AESATYINDASANVFNIRKIIF-------PASDGQKHIDIVTNMTNAVWSNPIPISVAKV 234 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + N + + + ++ +F + + Q L +I L+++ + Sbjct: 235 ITINDNDYLNFSQLTSYMLSNSQAKDSISLKFWQEVFQPLSLMILILLAVPLSIGSTRSS 294 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + +F + I I P + + + + L IK K Sbjct: 295 TLILKLLLGAFFGFAFFIINQIFGPIALILHLPPILGAAGPTVIALILLIYLFIKSK 351 >gi|301308106|ref|ZP_07214060.1| putative permease [Bacteroides sp. 20_3] gi|300833576|gb|EFK64192.1| putative permease [Bacteroides sp. 20_3] Length = 651 Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 30/183 (16%), Positives = 75/183 (40%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K ++L+ FLM+ +FI + + + I+ + + +L ++ Y ++ Sbjct: 5 KRLYTFMLQTFLPLFLMTFGICLFIVLMQFLWRYIDDMVGKGLGIPVLAEMFMYAALFLV 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PM P + + ++ ELL + + G S I +++P++ + +S+ F +N + Sbjct: 65 PMALPLAILLASLMTFGNLGERLELLAMKSAGVSLIHIMRPLIVTLLFVSVGAFFFQNNV 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + L + + E F++ + + K +P + L ++ Sbjct: 125 MPVVQVKLYTLLYSMRQKSPELDIPEGSFYKDIPGFNVYVKKKDPKDGLLKDVMIYDYSE 184 Query: 182 QTH 184 + Sbjct: 185 GFN 187 Score = 44.2 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 37/95 (38%), Gaps = 4/95 (4%) Query: 263 ELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGF 322 + + +E+HK+ T ++F I A A++R+ P+ IS+ + + Sbjct: 381 YKVRRHLTEWHKKFTVSFACIMFFFIG---APLGAIIRKGGLGVPVVISVILFIFYYIID 437 Query: 323 SYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIKK 356 + + ++L ++ + + + K Sbjct: 438 NMGFKMARDGVWDAWEGMWLSSVVLTPMGIFLTYK 472 >gi|160871958|ref|ZP_02062090.1| permease [Rickettsiella grylli] gi|159120757|gb|EDP46095.1| permease [Rickettsiella grylli] Length = 376 Score = 67.3 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 50/364 (13%), Positives = 116/364 (31%), Gaps = 24/364 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + S L+ + I + + +N V+ + NIL K+ P L Sbjct: 2 ILFRYLTREVLTSLLLITSLLFLILISNEFVHYLNQVAYGKFAANILWKLIVLESPRFLA 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFL--FISENI 120 ++ PF + + + E+ +++ G S L + L LL + Sbjct: 62 ILLPFSLCLAILFTYGRLYADYEMTVLNACGFSLGQLTRLSLPFIFLLFFIVAGLSLWLS 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + L + ++T++ IF+ + Sbjct: 122 PSLLSYRNKLLTQTGIAIELQTLQPGRFQQTNQGHRIIYVEKVSTDHHTVKNIFLAQTSP 181 Query: 181 TQTHKIYYAQSG----------SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT 230 + + + + + +G+ ++ +P + I F++Y + Sbjct: 182 KEASQEITPWTILSAHRGYQTLNPHTKEPFFVAVNGKRYQGTPGQTEYYITAFQNYGIHI 241 Query: 231 ESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 ++T K + + L N +P + Y SE RL+ L ++ + Sbjct: 242 NLPRTTT-HKKQDTLSSMALWNASPPHKAC-------YFSELQWRLSAPLSILLLS---L 290 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 +A + ++ K + + I V+ + +N L L+ I Sbjct: 291 LAIPLSRVNPRQGKFLHVLPVIGIYI-VYLNLLLVGRDWIENGTISYTLGLWPIHGLLIL 349 Query: 351 LLMI 354 +++ Sbjct: 350 TILV 353 >gi|46446270|ref|YP_007635.1| hypothetical protein pc0636 [Candidatus Protochlamydia amoebophila UWE25] gi|46399911|emb|CAF23360.1| hypothetical protein pc0636 [Candidatus Protochlamydia amoebophila UWE25] Length = 360 Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 47/367 (12%), Positives = 128/367 (34%), Gaps = 18/367 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNI--LLKISGYLIPT 59 +E Y + + FL+ + + +I + + L I L++ +++ + Sbjct: 4 SIWERYFVSEFIKVFLLFLVCFYGLYVLIDYASHTSALPHHHIQLRIRELIRYYLFILAS 63 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 ++ P + + ++N + EL+ + G TL++P L +A+ L+++E Sbjct: 64 RAEILIPLALLIAFIKTVCTLNTHQELVALMAGGIKLKTLMRPFLMIALAFVCLLYLNEQ 123 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P ++ L + E + + +D + + + + + + Sbjct: 124 FVLPSTLKKLRHLENATKHQKKRQLPEITVKHVVLEDRSLLLYQNYDSEKEEFFDVYWIE 183 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ---TESANSS 236 + ++ + +++ + + + P + + + Y + Sbjct: 184 SIDS----IYRAKYLCPNKEIPVGYFVDHLLRQPNGELLQQQAYSQYEFKNLLFNQELLQ 239 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + +L + L+ L P+ E + F+ +L ++ L A Sbjct: 240 SAILDPDILPLTNLFFQQPSLFANLSEKESKIATAFYWKLLMPWLCLLAIL-----APAP 294 Query: 297 ALVRQRKKIHPIFISLSISFGV--FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + VR ++I FI + FG+ F+ + + PI + L I Sbjct: 295 SCVRFSRQIPIFFIYIYSLFGLIAFYMLMDAAQVLAKRQVLPPIWAIGLPFILVFSFY-- 352 Query: 355 KKKYTKI 361 ++ ++ Sbjct: 353 SYRFARL 359 >gi|297250818|ref|ZP_06934295.1| permease, YjgP/YjgQ family [Neisseria polysaccharea ATCC 43768] gi|296837906|gb|EFH21844.1| permease, YjgP/YjgQ family [Neisseria polysaccharea ATCC 43768] Length = 188 Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 20/189 (10%), Positives = 59/189 (31%), Gaps = 8/189 (4%) Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 I D ++ + L + ++S +S+ + + Sbjct: 5 IWQRNDKNELTQAAEAESAVLNTDGSWQLKNIRRSILGEDKVEVSTAAEESWPISVKRNL 64 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 +++K + ++ L + + + Y + ++L + + L++ Sbjct: 65 MDVLLVKPDQMSVGELT-TYIRHLQNNSQNTQIYAIAWWRKLVYPVAAWVMALVAFAF-- 121 Query: 295 KRALVRQRKKIHPIFISLSISFGVFW---GFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 R +F + + + F + P+ IL LF + ++ Sbjct: 122 TPQTTRHGNMGLKLFGGICLGLLFHFAGRLFGFAGQLYGVPPFLAGILPTALFALLAV-- 179 Query: 352 LMIKKKYTK 360 +I+K+ + Sbjct: 180 RLIRKQEKR 188 >gi|254374089|ref|ZP_04989571.1| hypothetical protein FTDG_00250 [Francisella novicida GA99-3548] gi|151571809|gb|EDN37463.1| hypothetical protein FTDG_00250 [Francisella novicida GA99-3548] Length = 353 Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 45/357 (12%), Positives = 124/357 (34%), Gaps = 8/357 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + YI R + SFL+ + + ++ L +++ +++ + +++ + +P + Sbjct: 3 LNRIDRYIFRTVFSSFLIVSIIFCILFFIFTYLAQVSNNTANVSNFELIIN-TLIQLPGI 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P C + L+ + N+E++++ + G S + K V+ + ++ S+ + Sbjct: 62 LYTLLPACAMVGALMGLSLLANNSEIIVLRSFGRSTAQIAKGVILVGLIGSVTTIVFGGY 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + + + + + + + +Q + + R Sbjct: 122 IAPILQRQVDTNMVTYNTHDLWFKTPDGFMNIANIEPTKGKAYGIRKFMVQDNKVREIRY 181 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ S ++ R+ I S K I I+ + + + S + Sbjct: 182 AESATYINDASANVFNIRKIIF-------PASDGQKHIDIVTNMTNAVWSNPIPISVAKV 234 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + N + + + ++ +F + + Q L +I L+++ + Sbjct: 235 ITINDNDYLNFSQLTSYMLSNSQAKDSISLKFWQEVFQPLSLMILILLAVPLSIGSTRSS 294 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + +F + I I P + + + + L IK K Sbjct: 295 TLILKLLLGAFFGFAFFIINQIFGPIALILHLPPILGAAGPTVIALILLIYLFIKSK 351 >gi|153808346|ref|ZP_01961014.1| hypothetical protein BACCAC_02640 [Bacteroides caccae ATCC 43185] gi|149129249|gb|EDM20465.1| hypothetical protein BACCAC_02640 [Bacteroides caccae ATCC 43185] Length = 638 Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 85/205 (41%), Gaps = 2/205 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +++I++ F+ + +FI + + + ++ + ++++ + Y T++ Sbjct: 11 KKLDIFIVKSFMMLFVGTFFICLFIFMMQFLWRYVDELVGKGLEMSVMAQFFFYSALTLV 70 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P+ P + + + ELL + G S + +++P++F L F +N++ Sbjct: 71 PVSLPLAVLLASLITFGNFGERYELLAMKAAGISLLKIMRPLVFFVCGLVGISFYFQNVV 130 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P ++ + L + + E +F+ D +KI+K N + ++ Sbjct: 131 GPIAQAKLGTLILSMKQKSPELDIPEGVFYSEIPDYNLKIAKKNRKTGMLYDVLIYDLKE 190 Query: 182 QTH--KIYYAQSGSIDLDRQAIILN 204 ++ YA SG +++ L Sbjct: 191 GFEKARVIYADSGRLEMTADKQHLW 215 Score = 44.2 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 14/112 (12%), Positives = 44/112 (39%), Gaps = 4/112 (3%) Query: 246 NLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKI 305 N++ L + +++E+HK++T L ++F I A ++R+ Sbjct: 353 NMASDLTFKSYTMETNDYAIRKHKTEWHKKITISLSCLLFFFIG---APLGGIIRKGGLG 409 Query: 306 HPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFLLMIKK 356 P+ +S+ + + + + + + ++ ++ + + + K Sbjct: 410 MPVIVSVLVFIIYYIIDNTGYKMARDGKWIVWMGMWTSSAVLAPLGIFLTYK 461 >gi|150010074|ref|YP_001304817.1| hypothetical protein BDI_3493 [Parabacteroides distasonis ATCC 8503] gi|256838884|ref|ZP_05544394.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|149938498|gb|ABR45195.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503] gi|256739803|gb|EEU53127.1| conserved hypothetical protein [Parabacteroides sp. D13] Length = 651 Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 30/183 (16%), Positives = 75/183 (40%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K ++L+ FLM+ +FI + + + I+ + + +L ++ Y ++ Sbjct: 5 KRLYTFMLQTFLPLFLMTFGICLFIVLMQFLWRYIDDMVGKGLGIPVLAEMFMYAALFLV 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PM P + + ++ ELL + + G S I +++P++ + +S+ F +N + Sbjct: 65 PMALPLAILLASLMTFGNLGERLELLAMKSAGVSLIHIMRPLIVTLLFVSVGAFFFQNNV 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + L + + E F++ + + K +P + L ++ Sbjct: 125 MPVVQVKLYTLLYSMRQKSPELDIPEGSFYKDIPGFNVYVKKKDPKDGLLKDVMIYDYSE 184 Query: 182 QTH 184 + Sbjct: 185 GFN 187 Score = 43.8 bits (101), Expect = 0.038, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 37/95 (38%), Gaps = 4/95 (4%) Query: 263 ELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGF 322 + + +E+HK+ T ++F I A A++R+ P+ IS+ + + Sbjct: 381 YKVRRHLTEWHKKFTVSFACIMFFFIG---APLGAIIRKGGLGVPVVISVILFIFYYIID 437 Query: 323 SYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIKK 356 + + ++L ++ + + + K Sbjct: 438 NMGFKMARDGVWDAWEGMWLSSVVLTPMGIFLTYK 472 >gi|114768925|ref|ZP_01446551.1| permease, YjgP/YjgQ family protein [alpha proteobacterium HTCC2255] gi|114549842|gb|EAU52723.1| permease, YjgP/YjgQ family protein [alpha proteobacterium HTCC2255] Length = 366 Score = 66.9 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 47/361 (13%), Positives = 116/361 (32%), Gaps = 8/361 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + +Y + SF+ L IV + + L +N ++ + L +S T L Sbjct: 2 TLAIYFGKRYLISFIRVFLSIVLLVLLFDFLTNLNRLNGIEAQIWNALILSLLRTTTYLS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + S++R+ E +++ +G S + + PV+ A L + + + Sbjct: 62 LAMPLIIMLSALAFSVSLSRSNEFIVLRASGVSALKGLFPVISSAFFLGLISIFMLDPLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSY------LEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 K K + + ++ N L + I Sbjct: 122 GKMIGYYNIKLDKLRSKEQSQVLINDNGYWMRQATLNGHQIIKAVNVSNNGQRLHQVTIF 181 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVH-RKSPISKDISIMKFKSYTLQTESANS 235 + + + + + + ++ N + K + I+ K K ++TE + Sbjct: 182 NYDENGLVTERFFSESAALGNNELLLTNAIKWSDTKIKKNPIIANEKIKKLKIKTEITPT 241 Query: 236 STIVLKANDQNLSFL-LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + A+ + +S +N + Y+S+ ++ + ++ ++ V Sbjct: 242 QLLDGYASPETISPWNMNKQIQKVKSSGFSVLKYQSKKMEQYARPFLFIVMVVLGTVFTL 301 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + + R + ++ F F + + + P I L L + Sbjct: 302 QNSRARNVGISVVLAVASGFFLHFFQNFCTTLGRSGEIPLIIATWSPILSIGLIAMTLFL 361 Query: 355 K 355 Sbjct: 362 H 362 >gi|32491207|ref|NP_871461.1| hypothetical protein WGLp458 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166414|dbj|BAC24604.1| yjgP [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 357 Score = 66.9 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 58/353 (16%), Positives = 118/353 (33%), Gaps = 3/353 (0%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ I +S + I + ++++ ++ +S I+ + IP ++ Sbjct: 2 IILKYLIKKILKSQFHILCILFLIFFCQKLVRILSSMSEELIPKKIIFFLLILYIPEIIK 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + V+ ++ + E++ I G IK +LFL +L+ F F++ I Sbjct: 62 LILPLSLFISIALVMQKLHNSNEIISIKTCGIGNECFIKVILFLNLLVMSFSFVNVMWIS 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + ++ + + L E F + D I + L+ IFIV Sbjct: 122 PLALNYKHKIISYNLSNIDKLKLNEKQFKFIKDKNIILFVDNIKDKNLKNIFIVKFILKN 181 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 Y + + + + + FKS S I L Sbjct: 182 KE---YIPVVFVSKHGSLYKDLLKNKNVINLNYGEYYEIDFKSNYFFIASFERYQIELFN 238 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 L + N +E Y+ E++ R+T +I +IS K+ Q Sbjct: 239 TFSRLKEPSSEYVYFKNLFNSCIEEYKLEYNWRITIVFSVLIMSIISFALNIKKLGSGQF 298 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + I F + + + + F++ SI L Sbjct: 299 FNLFLGIFFYLIFFISQTFIYSNHSLFKLHSIFFMWIINFIYIFFSIALYYNN 351 >gi|254369661|ref|ZP_04985671.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica FSC022] gi|157122620|gb|EDO66749.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica FSC022] Length = 353 Score = 66.9 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 46/357 (12%), Positives = 124/357 (34%), Gaps = 8/357 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + YI R + SFL+ + + ++ L +++ +++ + +++ + +P + Sbjct: 3 LNRIDRYIFRTVFSSFLIVSIIFCILFFIFTYLAQVSNNTANVSNFELIIN-TLIQLPGI 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P C + L+ + N+E++++ + G S + K V+ + ++ S+ + Sbjct: 62 LYTLLPACAMVGALMGLSLLANNSEIIVLRSFGRSTAQIAKGVILVGLIGSVTTMVFGGY 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + + + + + + + +Q + + R Sbjct: 122 IAPILQRQVDTNMVTYNTHDLWFKTPDGFMNIANIEPTNGKAYGIRKFMVQDNKVREIRY 181 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ S ++ R+ I S K I I+ + + + S + Sbjct: 182 AESATYINDASANVFNIRKIIF-------PASDGQKHIDIVTNMTNAVWSNPLPISVAKV 234 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + N + + + ++ +F + + Q L +I L+++ + Sbjct: 235 ITINDNNYLNFSQLTSYMLSNSQAKDSISLKFWQEVFQPLSLMILILLAVPLSIGSTRSS 294 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 I +F + I I P + + + + L IK K Sbjct: 295 TLILKLLIGAFFGFAFFIINQIFGPIALILHLPPILGAAGPTVIALILLIYLFIKSK 351 >gi|218679464|ref|ZP_03527361.1| putative permease protein [Rhizobium etli CIAT 894] Length = 138 Score = 66.9 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 52/124 (41%), Positives = 84/124 (67%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YILR +G+ FL++ L ++ I W Q+LQRINLV+ S +S+ K++ ++P++ Sbjct: 11 MKLLETYILRRVGQMFLVALLPVLAIIWTTQVLQRINLVTDSGQSIGSFAKLATMILPSI 70 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V PF + T LT+MN ++EL +ID G R LI+P+L LA ++S+F F +N+ Sbjct: 71 IPVVLPFALVIAITQTLTTMNNDSELTVIDAAGARRSVLIRPILLLAAVVSVFSFFVDNV 130 Query: 121 IEPK 124 +EP+ Sbjct: 131 VEPR 134 >gi|284036898|ref|YP_003386828.1| permease YjgP/YjgQ family protein [Spirosoma linguale DSM 74] gi|283816191|gb|ADB38029.1| permease YjgP/YjgQ family protein [Spirosoma linguale DSM 74] Length = 501 Score = 66.9 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 63/169 (37%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + +L F ++ ++FI + ++ I+ S L ++ Y Sbjct: 1 MKKIDKLVLGSFWGPFFLTLGVVIFIFLMRLLMFYIDEFVSKDLDLATFGRLLFYFALLT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P P + + ++ EL + + G S ++P+L +AI +S F F N Sbjct: 61 IPTALPLAVLLSSLMTFGNLGEFFELTALKSAGISLTRAMRPLLIVAIGISAFSFWFNNS 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT 169 + P L + A L+E +F+ IK+ + Sbjct: 121 VAPWANLKGYSLLYDIKTAKATLNLKEGIFYNDLPGYSIKVDRKIKAEK 169 Score = 48.1 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 41/104 (39%), Gaps = 4/104 (3%) Query: 254 NPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLS 313 N + + + Y+ E H + TQ + + LI A++++ P+ I++ Sbjct: 364 NVTYLTEKEKNVWRYQLETHHKFTQAISVFVMFLIGAS---MGAIIKKGGFGLPVLIAIV 420 Query: 314 ISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFLLMIKK 356 ++ + ++PI +L + LL++++ Sbjct: 421 FFIFLYVLTIAGDKYAKDGLLWVPIGAWLANIVLFPFGLLLMQR 464 >gi|57242354|ref|ZP_00370293.1| conserved hypothetical integral membrane protein, putative [Campylobacter upsaliensis RM3195] gi|57017034|gb|EAL53816.1| conserved hypothetical integral membrane protein, putative [Campylobacter upsaliensis RM3195] Length = 351 Score = 66.9 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 50/345 (14%), Positives = 112/345 (32%), Gaps = 12/345 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K YIL + L L + I ++ +Q NL SS S L K+ G+++P + Sbjct: 11 LKLIFKYILNQFLGTHLSIFLVLFGIVSMVFFIQIANLTSSIEISFLDLFKLYGFMLPRI 70 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P F + T L +++ E ++ G + + + + L +A LS+ + + Sbjct: 71 LIFTLPLAFFVALTLALYRLSKENESVVFFTLGFTPLKMAQFFLKIATFLSVLMLGVALV 130 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P K + + F+Y + D + + ++ S D Sbjct: 131 MIPIVYQLQKNFVDYKKTQIKFNYKTGEFGQKFLDWMIFIQDEKEGGYENIIMYHPKSTD 190 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ A+ +++ + E + + + + L + S + Sbjct: 191 NLKEQLIIAKEANLERSNEGFAFRLNEGKMYNFDGGEALFIG-EFENLVVNTKFSDNLGQ 249 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 +N N + EF + LFP+ L ++ Sbjct: 250 TKAFYEYWDDINTNADKAR-----------EFVMYVCISLFPLASTLFALSFGIVTYRYE 298 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC 345 + +F +++ FG+ + + + Sbjct: 299 KGFIYLGMFGVIAVYFGLLSSLYKPPLLMSFLIFSFAFAASIICF 343 >gi|298374434|ref|ZP_06984392.1| permease [Bacteroides sp. 3_1_19] gi|298268802|gb|EFI10457.1| permease [Bacteroides sp. 3_1_19] Length = 651 Score = 66.6 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 30/183 (16%), Positives = 75/183 (40%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K ++L+ FLM+ +FI + + + I+ + + +L ++ Y ++ Sbjct: 5 KRLYTFMLQTFLPLFLMTFGICLFIVLMQFLWRYIDDMVGKGLGIPVLAEMFMYAALFLV 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PM P + + ++ ELL + + G S I +++P++ + +S+ F +N + Sbjct: 65 PMALPLAILLASLMTFGNLGERLELLAMKSAGVSLIHIMRPLIVTLLFVSVGAFFFQNNV 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + L + + E F++ + + K +P + L ++ Sbjct: 125 MPVVQVKLYTLLYSMRQKSPELDIPEGSFYKDIPGFNVYVKKKDPKDGLLKDVMIYDYSE 184 Query: 182 QTH 184 + Sbjct: 185 GFN 187 Score = 43.8 bits (101), Expect = 0.040, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 37/95 (38%), Gaps = 4/95 (4%) Query: 263 ELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGF 322 + + +E+HK+ T ++F I A A++R+ P+ IS+ + + Sbjct: 381 YKVRRHLTEWHKKFTVSFACIMFFFIG---APLGAIIRKGGLGVPVVISVILFIFYYIID 437 Query: 323 SYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIKK 356 + + ++L ++ + + + K Sbjct: 438 NMGFKMARDGVWDAWEGMWLSSVVLTPMGIFLTYK 472 >gi|148244590|ref|YP_001219284.1| hypothetical protein COSY_0441 [Candidatus Vesicomyosocius okutanii HA] gi|146326417|dbj|BAF61560.1| hypothetical protein [Candidatus Vesicomyosocius okutanii HA] Length = 357 Score = 66.6 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 45/360 (12%), Positives = 120/360 (33%), Gaps = 21/360 (5%) Query: 9 LRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFC 68 +R + I + + Q++ + + LL + G+ + + + Sbjct: 1 MRNTLVILSAVFIVISLVVFGNQLVVVVKESLEEGIPVKDLLPLVGFNMIRDIVPILSLS 60 Query: 69 FAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRST 128 + + + +N+E +I+++ G + + + L I++ I + I ++ P + Sbjct: 61 LLLAIILSINKLYKNSEAVIMNSLGLNNKHFMVFIQPLVIVIVIVIVILTTVVVPWSKQQ 120 Query: 129 IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKY------NPNNTLQGIFIVDSRDTQ 182 + ++ FS+++E F + I + + ++GIFI + + Sbjct: 121 KDLIINHSKNISKFSFIKEREFQEFKNGDIIFFASKVSNFNNSKEQNMEGIFIYTFINNE 180 Query: 183 THKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 I Q+ + + L +G + + I+ F Y +Q N ++ Sbjct: 181 PVIILAKQAKKYTNLNTNSVYLRLKNGTNYHGFILDTKKKILNFNLYDIQIIDGNMKKLI 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 K + +EF R++Q L +I + + Sbjct: 241 SKVIKVESKSTFELFFSRKLTE-------IAEFQWRISQPLSILILSALGV---LLGRTS 290 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + + I + + + ++ I + ++ L + IF+ + Sbjct: 291 QNGGRNLGVLIGVVVFILYNNALLISKSVLERGESLPIIGLWWVHLVMLLLIFIFYSIRN 350 >gi|323137915|ref|ZP_08072990.1| permease YjgP/YjgQ family protein [Methylocystis sp. ATCC 49242] gi|322396918|gb|EFX99444.1| permease YjgP/YjgQ family protein [Methylocystis sp. ATCC 49242] Length = 388 Score = 66.6 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 50/363 (13%), Positives = 128/363 (35%), Gaps = 12/363 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y+ + +G L+ L + + +L ++ + +++ + PTV Sbjct: 3 RLLFSYLFKRVGFGVLIVQLALSVPVVLSYLLYQLPPAAVRG---GLVIPALVGITPTVA 59 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + T + M + ++ S ++ +P L LA + + + N I Sbjct: 60 YVTLPMAVGVATALEFSRMASEGMIAVLYALRLSAWSICRPALTLAAGIVVLGYALANFI 119 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL-YIKISKYNPNNTLQGIFIVDSRD 180 P + ++ + + +L L+ F+ D+ + + I ++ + +F+ Sbjct: 120 APHYATNMQDVLNVVRNSLNHRMLDAAHFYTFDNGVKTLYIERWVTPDLAANLFVRQLSI 179 Query: 181 TQTHKI-YYAQSGSIDLDRQAII--LNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + A + +I L++G + +S S D+ I F Y + S Sbjct: 180 EKMQEETITAARAEFRRNESGVIVALSNGSIQTRSLSSGDVRIANFDEYAMALPMQGSGG 239 Query: 238 IVLKANDQNLSFL----LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 + + + + L N + P L +R+E KR + L+++ Sbjct: 240 LPDR-GWRGVYELSAGAFLANYESAKGDPRQLGEWRAEAAKRFGVPALALAHTLLAMALV 298 Query: 294 DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + R+ I ++I + + + ++ +L + + + Sbjct: 299 LSFGNITGRRGAGGSLIIIAIPAAHIAFLVGLESLLRISGFFFLLLAGLALAEVGVSVWL 358 Query: 354 IKK 356 I + Sbjct: 359 IAR 361 >gi|297623245|ref|YP_003704679.1| permease YjgP/YjgQ family protein [Truepera radiovictrix DSM 17093] gi|297164425|gb|ADI14136.1| permease YjgP/YjgQ family protein [Truepera radiovictrix DSM 17093] Length = 374 Score = 66.6 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 50/364 (13%), Positives = 104/364 (28%), Gaps = 34/364 (9%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y+LR + L S L +A R+ + L +L +PT + Sbjct: 2 RLDRYLLRECLPALLFSLLLYSGLAVTSANFPRLQWII--GTPLWGMLGWLALQLPTAIV 59 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + + ELL + G + L P+L L +L + + Sbjct: 60 QTLPIALLLAVLLTFGRLAAANELLAVQAGGVALRRLSAPMLALGLLAAGCALAMNQWVL 119 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P+ + L + + + E L + + + L G+ + R Q Sbjct: 120 PRANVRVGALWWELTSGGSGLFRLERQSIPLGEFSLSFAATDRRTDDLFGVRLEAWRGRQ 179 Query: 183 THKIYYAQSGSIDLDRQAII-----------LNDG------------EVHRKSPISKDIS 219 A+ + L DG +H ++P Sbjct: 180 LSV-VLAERARFVEGGLELYGYQNAVLDVGSLRDGAGTPEAQLQALVRLHNRAPSPDAPL 238 Query: 220 IMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQW 279 + F + + D + N+P+ FH++L + Sbjct: 239 RITFAE---DVDELITRFSGGGFEDTRSVTRTLRDANDPSLSAAERRAAAVLFHRKLAEP 295 Query: 280 LFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL 339 + +++ A A R + ++L+ ++ + + Q L Sbjct: 296 FANLTLLAVALPLAVLHARSRSVAFGLSLAVTLA-----WYLLLTLGQLLAQAGVLPVWL 350 Query: 340 YLFL 343 L+ Sbjct: 351 GLWF 354 >gi|224418390|ref|ZP_03656396.1| permease [Helicobacter canadensis MIT 98-5491] gi|253827708|ref|ZP_04870593.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|313141921|ref|ZP_07804114.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|253511114|gb|EES89773.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|313130952|gb|EFR48569.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] Length = 355 Score = 66.6 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 45/358 (12%), Positives = 105/358 (29%), Gaps = 5/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F YI+ + F + + + +I +++ ++ + +S N+++ + Y Sbjct: 1 MTLFSRYIISLYLKYFFILFVSLECFFVLIDLVKYLDEL---PQSANLIVLLIFYDFVYA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + SM RN++ G S+ + P+ ++ L+++ + Sbjct: 58 SNFILPLSLVLAQIVLSISMLRNSQFTAFLALGYSKARIFLPIFIVSFLITLLFVLLNAT 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + + + L + L I N Sbjct: 118 PFAYAKERVDLIIERGYLGSYKNDLFIKYNENYIYFEKIFPLLKMAENVKVYEVFNKQVI 177 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 A I I K + I Sbjct: 178 KIIEAPKATFIEDKWKLEDARITTLDSNLEVGKNPLKIEEQKTYETLEGFKPKILDNIYE 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLF-PVIFGLISIVAADKRALV 299 K ++ L + + RS + + F P++ ++ + Sbjct: 238 KQGSVSIVDALEA-IWLLKKQGVNTQKLRSSLYALIFFPFFAPLVMVCLARFTPNSNRYA 296 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + + I +GVF+ FS + P IL + + + S++L + K Sbjct: 297 NIGGITLGMILGVLIVWGVFFSFSRLSMSGFLPPEVSIILPIGILGLVSLWLFLRLFK 354 >gi|330813915|ref|YP_004358154.1| putative permease YjgP/YjgQ family protein [Candidatus Pelagibacter sp. IMCC9063] gi|327487010|gb|AEA81415.1| putative permease YjgP/YjgQ family protein [Candidatus Pelagibacter sp. IMCC9063] Length = 375 Score = 66.6 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 44/366 (12%), Positives = 101/366 (27%), Gaps = 13/366 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTES--LNILLKISGYLIPT 59 Y + S L+ L ++ +I + + + + + ++ PT Sbjct: 7 SKLIYYFSKEFIFSLLLVFLVFFSLSLLINSVGELIYLKDKKLENVIWMATILTLAKTPT 66 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSR-----ITLIKPVLFLAILLSIFL 114 + ++ F F + +N E+ + G S+ I I + ++ Sbjct: 67 TIIELSIFIFLFSGILFFVKIQKNNEVNTMLLAGISKTLPILIPSIISFICGLFIIFFLT 126 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF 174 IS + + S + + L ++ N + Sbjct: 127 SISSASLNFYEQEKRIYSSNDNLIVMNKMGLWFMENTTSGYNIIRADKIEKNNFNILNNV 186 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHR-----KSPISKDISIMKFKSYTLQ 229 + + D + + S I ++++ LN +V + + + + S+ Sbjct: 187 TIYNLDQGFNFVKRYDSEKITINQKRWSLNKTQVTQEKKSLSDSKKDNDASLVEMSFDSS 246 Query: 230 TESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 + N + + N R E R +FHK L+ + L+S Sbjct: 247 ININDLKNYFTDVNTVSFWEMF-KTIKTLNSRGYSAEELRVKFHKYLSLPFYLFAMILVS 305 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 L + S + P I + I Sbjct: 306 TTFTMGANKQYNTFMYLFFGTILGVCIYFLNDLSISFGLSNKLPLAISVWSPVGLIIILS 365 Query: 350 FLLMIK 355 + +I+ Sbjct: 366 TINLIR 371 >gi|118474326|ref|YP_891923.1| YjgP/YjgQ permease [Campylobacter fetus subsp. fetus 82-40] gi|118413552|gb|ABK81972.1| putative permease, YjgP/YjgQ family [Campylobacter fetus subsp. fetus 82-40] Length = 341 Score = 66.6 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 50/352 (14%), Positives = 122/352 (34%), Gaps = 20/352 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+ +F + I ++ +Q + S S + LLK+ +++P + Sbjct: 1 MNKVNKYLFASFLSTFASLFATLFLIMSIVFFIQIARITSYIEISFSELLKLYLFMLPQI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P F + +++ E +++ G + +F++ ++S+ + I+ I Sbjct: 61 LLFTIPIGFFVSVAMSFFRLSKENESIVMFTLGQDPKNISNFFIFISFIVSVVMLINSLI 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR- 179 + P ++ + L+ + + + + + N++L+ IV Sbjct: 121 VMPIAQNLNDNFIEYKKTKLSLNIKPSEFGQKFGSWMVFIEKQNDNNDSLKYENIVMYDV 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + ++ +QSG I + L + +I +++ ++T ++ Sbjct: 181 SDENERLITSQSGDIKNQNSNLELILKKGKMYDIRDNKWNISSYENMVIRTLIKDNKNET 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + L ++ + + T + LFP+ + ++ Sbjct: 241 YSLKEY----WLKAFSDDKRAKDLSIYTLVA---------LFPLASVMFALSFGIVTYRY 287 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + IF L F F Q Y IPI+++ F S++ Sbjct: 288 EKGIIYFGIFGVLFAYFAFIMLF------ARQPIYAIPIIFIVSFVFSALTF 333 >gi|333029769|ref|ZP_08457830.1| permease YjgP/YjgQ family protein [Bacteroides coprosuis DSM 18011] gi|332740366|gb|EGJ70848.1| permease YjgP/YjgQ family protein [Bacteroides coprosuis DSM 18011] Length = 632 Score = 66.6 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 39/206 (18%), Positives = 82/206 (39%), Gaps = 2/206 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K + ++L+ G F+ + +FI + + + ++ + + +L + Y T+ Sbjct: 4 LKKLDKFVLKSFGLLFIATFFICLFIFMMQFLWRYVDDLVGKGLEMTVLGQFFFYSALTL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P P + + + ELL + G S +I+P++ LA+LL F+ +N Sbjct: 64 IPASLPLATLLASLITFGNFGERFELLAMKAAGISLFKIIRPLMILAVLLCGISFVFQNN 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I PK S + L + + E +F+ D I + + + L I+ Sbjct: 124 IGPKAFSKLTTLLISIRQKSPELDIPEGIFYDEIDGYNIFVKEKDRKTGLLYDVIIYEFS 183 Query: 181 TQ--THKIYYAQSGSIDLDRQAIILN 204 +I A +G + + L Sbjct: 184 EGFDNARIIVADTGQLAMTADKQYLY 209 Score = 43.8 bits (101), Expect = 0.036, Method: Composition-based stats. Identities = 15/128 (11%), Positives = 48/128 (37%), Gaps = 4/128 (3%) Query: 230 TESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS 289 + S + K + ++L+ + + + +H+++T ++F I Sbjct: 332 LKKKQSVLNLAKRDIESLATDWSFREVEVKNTDLQIRRHLMAWHEKITLSFACLVFFFIG 391 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISS 348 A +++R+ P+ IS+ I + + + + + I +++ ++ Sbjct: 392 ---APLGSIIRKGGLGMPVVISVLIFIIYYIINTMGSKMAREGEWIVWIGMWMSTLILAP 448 Query: 349 IFLLMIKK 356 + + K Sbjct: 449 VGGFLAYK 456 >gi|257457656|ref|ZP_05622823.1| conserved hypothetical protein [Treponema vincentii ATCC 35580] gi|257445042|gb|EEV20118.1| conserved hypothetical protein [Treponema vincentii ATCC 35580] Length = 300 Score = 66.6 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 37/287 (12%), Positives = 88/287 (30%), Gaps = 3/287 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y+L+ F+++ LF + + + + + + LL++ +P Sbjct: 1 MKILQRYLLQLFFPVFVITILFFILLLQLGDLFLNLAQYLQNQVRFVTLLRVMYLYLPKC 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P ++ + +M EL I +G L+ P++ LSI +F E+ Sbjct: 61 ISFAMPLSVLFASSYTMGNMYAKNELTSIFASGMPLTVLVAPLVLCGFALSIGMFYFEDR 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I + L + + + + Y+ N ++ R Sbjct: 121 ILIHFQRQKIALVNELLEPQQNLNSSDLVILSESGKIVYFADYYDDNRKELSNVLIVMRT 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + S + D ++ + + S + Sbjct: 181 ESGDVSTVIKGSSAQWQTDHWAITDKSIYTFTAENDVHYQDAIDEGLFSEPSETFQRNIT 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYR---SEFHKRLTQWLFPVI 284 ++ +++ N + + + + FH RL + L Sbjct: 241 SIDEMSIAQAKVFIDNLKKWACPTMNIFLNITAVFHFRLRRSLCCFS 287 >gi|320101899|ref|YP_004177490.1| permease YjgP/YjgQ family protein [Isosphaera pallida ATCC 43644] gi|319749181|gb|ADV60941.1| permease YjgP/YjgQ family protein [Isosphaera pallida ATCC 43644] Length = 507 Score = 66.6 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 82/206 (39%), Gaps = 7/206 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y++R + SF ++ L I I + ++ + + L+ +++I+ YLIP LP Sbjct: 6 ILQRYVIRQLLGSFALALLAISSIIVLFLVMAE---AAKAGLGLDQIVQIAPYLIPGTLP 62 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P T V + + E+ + G S T++ P + L+I+LS L+++ + + Sbjct: 63 YTVPVALLFSVTVVYGRLAGDNEITAVKAAGLSVWTVLWPCILLSIVLSGALYLAASHVI 122 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS---- 178 P+ +K++ ++L + + ++ I K + L Sbjct: 123 PEANHAVKRVIFSNYEQTFTTFLRRDRILNNPNWPFVIIVKDMEGDDLIAPVFKRRAKIN 182 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILN 204 A+ + D + ++ Sbjct: 183 GRDGFDLNIVAKRARLSFDMERAMVR 208 Score = 42.3 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 12/105 (11%), Positives = 32/105 (30%), Gaps = 5/105 (4%) Query: 252 NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFIS 311 N + +E R+ P F L+ A +R + Sbjct: 400 NRAFREYDDWDYYDRKLETEKQMRIALSCGPFFFALLGAPVGILFA---KRDYLSAFITC 456 Query: 312 LSISFGVFWGFSYIIHKIEQNPYYIPILYLF--LFCISSIFLLMI 354 +++ + + + + P++ L+ +S + L++ Sbjct: 457 FLPIILIYYPLTLLGINLGKEGVLDPMIALWMGNLTLSVLAGLVL 501 >gi|16125010|ref|NP_419574.1| hypothetical protein CC_0757 [Caulobacter crescentus CB15] gi|221233731|ref|YP_002516167.1| hypothetical protein CCNA_00794 [Caulobacter crescentus NA1000] gi|13421992|gb|AAK22742.1| conserved hypothetical protein [Caulobacter crescentus CB15] gi|220962903|gb|ACL94259.1| conserved membrane spanning protein [Caulobacter crescentus NA1000] Length = 397 Score = 66.6 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 42/260 (16%), Positives = 94/260 (36%), Gaps = 6/260 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + Y+LR + + + ++++ +L+S +TE L L ++ L P + Sbjct: 5 NTLDRYLLRRTLAPMSAVLISTMVAFLMERLMRSFDLLSQTTEGLRYLAELLVNLTPHYV 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P F + V+ +N+++E+ I +GTS P + + +LL + I + Sbjct: 65 GLTLPGGFFIGLFVVVNGLNKSSEIDAILASGTSLTRFTAPFVAMGVLLMVLSVILFGFV 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTL-QGIFIVDSRD 180 +P R + A+ A + D ++ + + + Q +FI Sbjct: 125 QPYSRYAYHAVLHAAENAGWNGDVRPKALLSAGSDFFLTADRTDASGRYLQQVFIRRIDP 184 Query: 181 TQTHKIYYAQSGSIDLDRQAII----LNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 I A S + + L +G + ++ F S ++ Sbjct: 185 NGREDILTAVSAVVHKNPADSHIALELTNGR-QISTVAGAQSYVVNFSRLMFDVPSGDAG 243 Query: 237 TIVLKANDQNLSFLLNPNPN 256 + L+ D + L+ Sbjct: 244 LLRLRGEDVSELTLIELARQ 263 >gi|326797997|ref|YP_004315816.1| permease YjgP/YjgQ family protein [Sphingobacterium sp. 21] gi|326548761|gb|ADZ77146.1| permease YjgP/YjgQ family protein [Sphingobacterium sp. 21] Length = 505 Score = 66.2 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 35/260 (13%), Positives = 91/260 (35%), Gaps = 6/260 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + +L+ + F+++ ++F+ ++ + + I+ + ++L++ Y Sbjct: 15 MKKVHVLVLKAFFKPFIVTFFIVMFVLLMLFLFKYIDDLIGKGFEWYVILELLWYASAAQ 74 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + M P + + ++ + EL+ I G S + P++ L L+SI F + Sbjct: 75 ISMAMPLAMLLSSIMTFGNLGESYELVAIKAAGISLRKAMMPLIILVSLISIGSFFFSDY 134 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + L + +++ +F I+ + + T+ I+ Sbjct: 135 ILPVTNLKMGSLLYDVRNKKADFLIKDGIFNNSIPGYSIRAKNKSKDGTVLYNLIIYQHG 194 Query: 181 T--QTHKIYYAQSGSIDLDRQAII----LNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + + A+ G + R L DG + ++ + + + Sbjct: 195 NISRGTNVLLAKEGVMYNSRDNNYMILKLKDGVRYEETTAGDRSYNPRQQFTRYYFDQTE 254 Query: 235 SSTIVLKANDQNLSFLLNPN 254 + + L + Sbjct: 255 QKFDMSTFQMKRTDEDLFKS 274 Score = 40.4 bits (92), Expect = 0.42, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 48/114 (42%), Gaps = 6/114 (5%) Query: 245 QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKK 304 + + +L+ + + Y E+HK+ T + ++ I A A++R+ Sbjct: 358 RYIKEVLDMKAKSDKDFDLSIVRYILEYHKKFTLAVSCLLLFSIG---APLGAIIRKGGL 414 Query: 305 IHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMIKK 356 P+ +++ I F ++ S + K + P+L + + ++ + + + K Sbjct: 415 GLPVVMAI-IFFLIYHIISTVAEKSAKEGNIDPVLGTWTAIIALTPLGIFLTYK 467 >gi|294508120|ref|YP_003572178.1| Conserved hypothetical protein containing permease domain [Salinibacter ruber M8] gi|294344448|emb|CBH25226.1| Conserved hypothetical protein containing permease domain [Salinibacter ruber M8] Length = 492 Score = 66.2 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 39/289 (13%), Positives = 107/289 (37%), Gaps = 14/289 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 ++ +LR + F ++F+ + +++ + ++ +++++++ Y + + Sbjct: 21 LRRLHWIVLRRLPGPFFGWLGTLMFLLLMQFLIRWLPEIAGKGIPVSVIVELIAYNLAYM 80 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + + + +I +TG S ++ P L +A LL + N+ Sbjct: 81 VVLAVPMSVLLAALMAFGELAESQYYTVIKSTGISFGQIVWPALVVAALLMGGMLYFNNV 140 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ +QL + + L +F+ +D I + P + Sbjct: 141 MLPEANHRARQLWSDIRGKRPGFELRPGIFYEDMEDYSILVQDRPPGTNKLIDVTIYDYT 200 Query: 181 TQTHKI--YYAQSGSIDLD----RQAIILNDGEVHRK-----SPISKDISIMKFKSYTLQ 229 + A+ G I+ R + L +GE+HR + S+ + F + ++ Sbjct: 201 QGRDRQAVIKAERGVIESSAGGARLTLTLRNGEMHRPLPPDANNQSERYERLTFDRHRIR 260 Query: 230 TESANSSTIVLKAND--QNLSFLLNPNPNNPNYRPELLETYR-SEFHKR 275 +N ++ + ++ + P + + R ++R Sbjct: 261 FTLSNVVFRRSESEETARSTRTMRTPRLLDTLDSLKTERDARYQTLYER 309 Score = 59.2 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 42/106 (39%), Gaps = 6/106 (5%) Query: 251 LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFI 310 + + ++ + +Y+ EF+K+ + L +IF ++ +R + I Sbjct: 365 IQNIRRDTEWQTRRIRSYQVEFYKKFSIALACLIFMVVGAPLGLAL----RRGGLATIGA 420 Query: 311 SLSISFGVFWGFSYIIHKIEQNPYYIPI--LYLFLFCISSIFLLMI 354 F ++W K+ + ++ P +++ +S L +I Sbjct: 421 VALGIFMLYWITLVQGEKLSERGFFPPWLGMWIANLLMSGAGLWLI 466 >gi|319760186|ref|YP_004124124.1| putative permease [Candidatus Blochmannia vafer str. BVAF] gi|318038900|gb|ADV33450.1| putative permease [Candidatus Blochmannia vafer str. BVAF] Length = 363 Score = 66.2 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 45/361 (12%), Positives = 123/361 (34%), Gaps = 5/361 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K ++YI + I S + L ++ ++ +I+++ + T S+ + + +P Sbjct: 3 KILDMYIKKSILSSISIVFLILISLSSIIRLIDGLRNFEKKTYSIIEIFFCTFLSLPKDF 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P + L + EL+I+ G S + V+ +++ + I + + Sbjct: 63 ELFLPISILLGGLLGLGVLEIRNELVIMKVFGLSYFQITFSVVKVSVFILILHIMLNEWL 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + + F + + +D++ ++ I N + G+ + Sbjct: 123 LPGSQYMLYIYQGHKEYNSYFFPEKNKNLWIIDNNGFVCIEYMPTTNNVFGVNLYYLTKD 182 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + + + +++ + + E++ + + S I Sbjct: 183 KKIEKIIYFKDATYINKSWFVSSAIELNFSDKTHIVNRTVFHYKWNTILTPDLLSIITTN 242 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 ++S L + N + + Y F ++ L +I +IS++ + ++ Sbjct: 243 PRVLSVSKLFSCIK-YFNGINQNSQYYELIFWNKILSPLTGMIMLIISLLYSFGPFSKKK 301 Query: 302 RKKIHPIFISLSISFGVFWGFS----YIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + F V F + + IP+L + I +F + + Sbjct: 302 IGFRLFFGSIIGFLFYVLHQFFDVFCVMHNIYPLVGSIIPVLLFIVINIVIVFYKISNFR 361 Query: 358 Y 358 + Sbjct: 362 F 362 >gi|298372198|ref|ZP_06982188.1| permease [Bacteroidetes oral taxon 274 str. F0058] gi|298275102|gb|EFI16653.1| permease [Bacteroidetes oral taxon 274 str. F0058] Length = 490 Score = 66.2 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 25/184 (13%), Positives = 61/184 (33%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +LY+LR +++ +F+ + I R++ + + + K Y Sbjct: 5 KKLDLYVLRQFMTLLVVTFFISLFVIVMQFIWLRLDDMMGKGIPIETMAKFFFYSSLAFT 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PM P + + +M EL+ + G S +++ ++ ++ I F N + Sbjct: 65 PMALPLAILLASLMTFGNMGERFELIAMKTAGISLFRIMRSLMIFIAMIVIGAFFYSNYV 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + L + + F+ + I + + ++ Sbjct: 125 IPMAQKRMWTLVYSFKDKALEIEIPVGEFYTGIRGVNIYARGRDTDKKAMTNVMIYDFTK 184 Query: 182 QTHK 185 Sbjct: 185 GFQS 188 >gi|88800547|ref|ZP_01116109.1| hypothetical protein MED297_15285 [Reinekea sp. MED297] gi|88776692|gb|EAR07905.1| hypothetical protein MED297_15285 [Reinekea sp. MED297] Length = 353 Score = 66.2 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 45/358 (12%), Positives = 111/358 (31%), Gaps = 5/358 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+++ + L I + +V I + T +L + + Sbjct: 1 MNIQNGYLVKQTSLMVSIVLLAIAGLLFVTGIADEAARRMTDTYTLQSAVIYKFSTLSAE 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + T + S N++ EL II + S L+ +L A++L ++ Sbjct: 61 VYEYIGVIVMLGTLITVASFNKHQELTIIQLSAASAPALLLRLLLPALILLPIVYGIGEF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P ++ +Q A + + + ++ Y+ + + L GI Sbjct: 121 AAPSWQNNAEQARALLRGEKNPTL---RGQWYKANNEYVNVEFISNETELTGITRFQMNP 177 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + ++ D +++N EV R + ++ + L Sbjct: 178 QKQLMAASYSKRAVYSDGSWVLINTIEVKRTERGFERKTMGISSWENAVFTPELVRNLAL 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 ++++ L L L R+ L + +++ A + Sbjct: 238 ESSNLTLPEL-WTQVRFRAEAGTLTPALERTLWNRVLFPLQYIGLMFVALAFAFGSFRQK 296 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + L + G+ + P + +L + + + ++K++Y Sbjct: 297 TIGDAAFKALVLGVISGLLIDTLSASLMVLAMPAFAAVL-VSNSLFTGLAFYLLKRRY 353 >gi|300871686|ref|YP_003786559.1| permease YjgP/YjgQ family protein [Brachyspira pilosicoli 95/1000] gi|300689387|gb|ADK32058.1| permease YjgP/YjgQ family protein [Brachyspira pilosicoli 95/1000] Length = 431 Score = 66.2 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 78/198 (39%), Gaps = 1/198 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI+ F+ LF FI + + + L+ ++ + L+I Y++P Sbjct: 1 MKKIKKYIILEAIGPFIAGVLFFTFIFVIQLLPELFKLILNNGAPIWTSLEIFVYMLPFN 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P M ++ + E++++ G S + + P++ L +F N+ Sbjct: 61 VAITIPMSILMAGIMGYGRLSSDNEIIVMRALGFSHMRIYAPIIILGFFTFLFSLFFNNV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + + L + + + F D+ + I Y +N ++ + Sbjct: 121 VMTESNYRYRALFSYIINIRPSIAVGKLEF-AYISDINLSIGAYYSDNNGMSNVVIYDGN 179 Query: 181 TQTHKIYYAQSGSIDLDR 198 +Q +I A+SG + Sbjct: 180 SQARRIITAKSGKWKNNE 197 Score = 45.4 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 23/239 (9%), Positives = 59/239 (24%), Gaps = 2/239 (0%) Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + L F +D N + + + + Sbjct: 192 KWKNNEANSKVITLTLYDGIVQEMPVYGFVSNDFTVFDAMDINIVRNVSKLNDHERGLRE 251 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK-SYTLQTESANSSTIVLK 241 + + ++ L + + S + I + + +AN S Sbjct: 252 IPAWEIRKKINTSMNNSLQTLTNQISNMISTAYSNSFITNIDGTTNIILTNANVSFSSFS 311 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + + + Y EFHK ++ + I + Sbjct: 312 NTYVTTNSAELDRLYKSTKKEAVPYFYYVEFHKFISIPAACLFMVFIGAPLGIVGKRSGR 371 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 I + + + + I + P ++ + + + LMI+ ++K Sbjct: 372 GFGFGLSVIVVVVYYILITVAEIIAGN-RKVPGFVAMWFPNIVLAVIGGFLMIRSFFSK 429 >gi|218264803|ref|ZP_03478497.1| hypothetical protein PRABACTJOHN_04207 [Parabacteroides johnsonii DSM 18315] gi|218221776|gb|EEC94426.1| hypothetical protein PRABACTJOHN_04207 [Parabacteroides johnsonii DSM 18315] Length = 655 Score = 66.2 bits (159), Expect = 9e-09, Method: Composition-based stats. Identities = 29/184 (15%), Positives = 72/184 (39%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K ++L+ FLM+ +FI + + + I+ + + +L ++ Y ++ Sbjct: 5 KRLYTFMLQTFLPLFLMTFGICLFIVLMQFLWRYIDDMVGKGLGIPVLAEMFMYAALFLV 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PM P + + ++ ELL + + G S + +++P++ ++SI F +N Sbjct: 65 PMALPLAILLASLMTFGNLGERLELLAMKSAGVSLVHIMRPLIITISMISIGAFFFQNYA 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + L + + E +F+ + + + L ++ Sbjct: 125 MPVVQVKLYTLLWSMRQKSPELDIPEGVFYSEITGFNVYVKHKDTETGLLRDMMIYDYSE 184 Query: 182 QTHK 185 +K Sbjct: 185 GFNK 188 Score = 48.5 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 35/293 (11%), Positives = 86/293 (29%), Gaps = 6/293 (2%) Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + + L + L++ G S +L K S+ Sbjct: 189 VSVMVADSGRLKTSADKMFLVLSLFNGESFRSLDKQSSTTGAKSSVPYQRETFKSRDILI 248 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 S + + ++ +N+ + + + N S K Sbjct: 249 EFDANFSRTDESFMQNQFMGKNMHDLQIFIDSVSVRLDSIQNVNAKNVYETSYKKTLKKP 308 Query: 187 YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAND-- 244 + ++ + N +K + +M F S +TI+ +A Sbjct: 309 QDIKQNNVKDEPNNDKSNTETTPEIQKTNKPVIVMNFDSLYQAENPGKKATILTRAKSSI 368 Query: 245 QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKK 304 +N+ + + +E+HK+ T ++F I A A++R+ Sbjct: 369 ENMKADYFFKAATIGDEAYRVRRHLTEWHKKFTLSFACMVFFFIG---APLGAIIRKGGL 425 Query: 305 IHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIKK 356 P+ IS+ + + + + ++L ++ + + + K Sbjct: 426 GMPVVISVILFIFYYIIDNIGFKMARDGVWEAWQGMWLSSAILAPLGIFLTYK 478 >gi|325971216|ref|YP_004247407.1| permease YjgP/YjgQ family protein [Spirochaeta sp. Buddy] gi|324026454|gb|ADY13213.1| permease YjgP/YjgQ family protein [Spirochaeta sp. Buddy] Length = 420 Score = 65.8 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 55/413 (13%), Positives = 120/413 (29%), Gaps = 56/413 (13%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 +I R SFL++ F FI ++ QIL + +L++ IP L Sbjct: 8 SLVYRHIGREYLLSFLVAFFFFFFIFFINQILLIAQRILLKQVDYFSVLQLVLLSIPQFL 67 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PF ++ V+ ++ N E+L I ++G S + P++ +++ S+ F++ + Sbjct: 68 LYTFPFSSLTASSMVIGDLSGNNEILAIRSSGISLKHVFIPIIIISLAFSMLTFLTADKA 127 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIK--------------------- 160 P ++L L L N + + + + Sbjct: 128 LPWSTKKYRELYTDLMRDLPTLELMANSTNTIANTVMVNKGVEGNTVHDIILFETSSVRG 187 Query: 161 -----ISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSI--DLDRQAIILNDGEVHRKSP 213 K + FI + G A + S Sbjct: 188 GQILSAPKAEVSLYDLQSFIYQLELDNPLILKSETQGGWALSKAESAQFFLNFSGQIASI 247 Query: 214 ISKDISIMKFKSYTLQTESANSSTIVLKAN--------DQNLSFLLNPNPNNPNYRPELL 265 S S + K + + K + +L+ L++ + + Sbjct: 248 ASALPSQLSIKELQQNIQEHKIALQAEKKRYQEKVQTLELSLAELVDKAKTDAEVSVSHI 307 Query: 266 ET--------------------YRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKI 305 E YR+E HK+ + ++ + R + Sbjct: 308 EELEVQLKQLKDQKPINFYYQYYRAELHKKYALSAACFMLVFLTFSLSFFRVKHGRLIGF 367 Query: 306 HPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + + + + + I + +P + L + L+ ++ Sbjct: 368 GLSMLVAVVYWYLLFFAQMQIFSLSISPALLIWSPNLLMFFGGLLFLLHARRL 420 >gi|289548597|ref|YP_003473585.1| permease YjgP/YjgQ family protein [Thermocrinis albus DSM 14484] gi|289182214|gb|ADC89458.1| permease YjgP/YjgQ family protein [Thermocrinis albus DSM 14484] Length = 351 Score = 65.8 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 117/357 (32%), Gaps = 11/357 (3%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YILR ++F +S ++ + + + + +SL I + +P Sbjct: 2 LQRYILRLYIKAFGLSSAVLLGTGVLYLTFETL--LVFRQKSLEIFFQYILLSLPVAFLY 59 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 ++P + T ++ + +I + G I L++PV+F +++LSI I P Sbjct: 60 LSPIVSWIALTMLIRFFIQRQLDRLIVSFGVPPIHLVRPVIFFSLVLSILHIYMSFQIYP 119 Query: 124 KCRSTIKQLSAKAQ--LALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 + ++ + + + T ++ + + + + + Sbjct: 120 SFQRSLYTIEKEYKKGKKDTLLIKDQWFALKDGEKVVYSHIGLADVSKGTAYDVFLLYTK 179 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + ++ ++ + D K M+ +N + K Sbjct: 180 EGSIEATLRASKAFWKGNSLFIPDAYYEDLEKGGKFYGPMEVS----FLSLSNIRPLASK 235 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + L++ Y +E +RL L P++ I A KR + + Sbjct: 236 LEHITFTELISVY-GMAERLGINRYAYLAEILRRLQLSLMPLLMVTIVARALLKRRSLVE 294 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 SL++ +I NP + + FL + L ++K + Sbjct: 295 GSLYGGF--SLALHMLSLNLIKITAEEIGVNPLWGLLPSFFLLMMVLRSLYDLEKGF 349 >gi|325919212|ref|ZP_08181261.1| putative permease [Xanthomonas gardneri ATCC 19865] gi|325550312|gb|EGD21117.1| putative permease [Xanthomonas gardneri ATCC 19865] Length = 360 Score = 65.8 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 51/357 (14%), Positives = 130/357 (36%), Gaps = 15/357 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L +SFL + + ++ ++ ++ + ++ +LL G Sbjct: 1 MPKLDRYLLSDFTQSFLATLIVLLVVSVGGVLVDILGNIADGRIPARLLLSQVGLQFVAY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP++ P + L + R++E+ +I G +++P+L L + + + + + Sbjct: 61 LPIILPLALMLGLLLALARLYRDSEMAVITAIGVGPRRMLRPILMLVVPVVVLIGLCSLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P T + + A ++ + LE F L + ++ + + G + + Sbjct: 121 LGPWASRTAETMLEDANRSVLMAGLESGKFTPLSGGGVVYLTTISADGKGLGKVFMQRQK 180 Query: 181 TQTHKIYYAQSGSIDLD---RQAIILNDGEVHRK--SPISKDISIMKFKSYTLQTESANS 235 + A+ G++ + + + L DG + + D +MKF S + + Sbjct: 181 DDRIDVVTAERGAMFFEGKANRYLRLEDGYRIEGPAAGNTLDYRLMKFASNDVALPDRSQ 240 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + LL+ + R++ H+RL L + F L+++ + Sbjct: 241 VHDANDPEVMWTTQLLS----------DERPAARAQLHERLAPPLLALAFALLTLPLSRS 290 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 ++ +I F++ + + + I + +I+ Sbjct: 291 APRQQRYGRIMLAFLAYMVGTNLMIVGTQWIANGKTPAALGLWWLTLPLLAVAIWAY 347 >gi|319956049|ref|YP_004167312.1| permease yjgp/yjgq family protein [Nitratifractor salsuginis DSM 16511] gi|319418453|gb|ADV45563.1| permease YjgP/YjgQ family protein [Nitratifractor salsuginis DSM 16511] Length = 372 Score = 65.8 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 38/361 (10%), Positives = 99/361 (27%), Gaps = 11/361 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K LYI R ++FL+ + + I LQ+ + N + + Y ++ Sbjct: 5 KRTFLYIARHYLKNFLILLIGLSLAVVFIDFLQQAQRLHGG---ANRKILYAFYTWEYMV 61 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 ++ P M S + + + G R ++ P L +L+ + + Sbjct: 62 ALIYPLVILMAMAWTQISFIYRNVFVSLFSFGFGRRQILIPFLASGVLIYLVFTGLQMTS 121 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 + + + + + NLFF+ +D + L I + + Sbjct: 122 FAYGQDRARMILHADRYKDALN----NLFFKYNDSFVYASRLDPLHKALLRGMIFEVKKN 177 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 Q + R + + + + K Sbjct: 178 QVVRTLRFDEARFHDGEWIAPRALVRSKRFDTEGELTGFEDKELKNMILLKGYRPKVFRK 237 Query: 242 ANDQNLSFLLN--PNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + L++ + + + ++ + ++ LF + +I Sbjct: 238 IYEGGTFSLVDSLAALHLLKKQGLSADKVKAILYNKVLTPLFALAMMVI--FFYRTPLYH 295 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYT 359 R +K L + + + + I ++ + ++ Sbjct: 296 RFVRKEQLWTALLGSALLTWALLFALFRLGMNGVIDPDLGQTLPILILILYAWRLDRRIR 355 Query: 360 K 360 + Sbjct: 356 R 356 >gi|330836570|ref|YP_004411211.1| permease YjgP/YjgQ family protein [Spirochaeta coccoides DSM 17374] gi|329748473|gb|AEC01829.1| permease YjgP/YjgQ family protein [Spirochaeta coccoides DSM 17374] Length = 427 Score = 65.8 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 62/422 (14%), Positives = 138/422 (32%), Gaps = 71/422 (16%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 YI++ SF ++ F FI +V QIL I V S+ +L + IP L Sbjct: 8 TLLRKYIVKEFLASFAVAFTFFFFIFFVNQILLLIQRVMVKNVSVADMLTLVVLSIPQFL 67 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PF + V+ + + E++ + ++G + PVL + I+LS+ FI +++ Sbjct: 68 IYTFPFSSLSAASMVIGEFSAHNEIIAMRSSGIPYRRIFSPVLVIGIVLSLLTFIVADML 127 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P ++ + + + + D + + +N + I + D+++T Sbjct: 128 LPFSSVRYQKEYREIMQKIPTLDVASYSSVTVGDKIIT--AGRVEDNIIHDIILFDAKET 185 Query: 182 QTHKIYYAQSGSIDLDRQAIILND--------GEVHRKSPISKDISIMKFKSYTLQTESA 233 + A+ G+I + EV P S +S + ++ Sbjct: 186 AEPRTISARQGTIFPGISQNLTYRLELENPVVLEVSSTDPSSWSLSSARTARLSVDFIDQ 245 Query: 234 NSSTIVLKANDQNLSFLLNP---------------------------------------- 253 + + L + L++ Sbjct: 246 SGALATLTPAQMSSRDLISAIEVRKQKINEQKQENLRLQNSLADELASVKAKAEDTDNGT 305 Query: 254 -------NPNNPNYRPELLETYRS----------EFHKRLTQWLFPVIFGLISIVAADKR 296 N + L+ Y+ E HK+L L ++ + Sbjct: 306 EKERLKTNARQLEQKITSLKNYKIEDFYYTYYRAELHKKLALSAACFCLILTALPISF-- 363 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFLLMIK 355 + + ++ +SL I+ ++ ++ KI + ++ + +I L + Sbjct: 364 -IKVRHGRLIGFGLSLLIACVYWFILFFMQLKIFDVSFSPGWLMWFPDVLVLAIGLAFLS 422 Query: 356 KK 357 ++ Sbjct: 423 RQ 424 >gi|183221200|ref|YP_001839196.1| putative permease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911291|ref|YP_001962846.1| permease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775967|gb|ABZ94268.1| Permease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779622|gb|ABZ97920.1| Putative permease; putative membrane protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 530 Score = 65.8 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 53/166 (31%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 +YIL+ I FL++ F I + I + I L LL GY+ L Sbjct: 38 SILRIYILKEILSPFLVALSFFTMIYMAVAIQKMIGLFVGKGVDFFRLLDYMGYVFGNTL 97 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PM P M ++ ++E+ + +G S + L L+++ + + Sbjct: 98 PMTIPMACLMSGIMAAGRLSGDSEITAMRASGVSFPYIYSNFLVFGFLMTLIVGYLNFYL 157 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN 167 P+ +K ++ F + Sbjct: 158 GPENTRKMKDFDNWIATYNPLLAIQPGQFSGDKTQDFFSEKGRTMY 203 Score = 53.9 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 34/106 (32%) Query: 250 LLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIF 309 L N + L + E HKR L IF +S + Sbjct: 387 LFTQLSELLNESKKTLTGFNVEIHKRFATPLSCQIFFFLSFPLGLVVKRSGKGMSFTLAV 446 Query: 310 ISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + L I + F S I +K + P + SI++++ + Sbjct: 447 VFLLIYYTFFIFGSGISYKENVPDWVGPWSANIVIATLSIYIMISR 492 >gi|283780133|ref|YP_003370888.1| permease [Pirellula staleyi DSM 6068] gi|283438586|gb|ADB17028.1| permease YjgP/YjgQ family protein [Pirellula staleyi DSM 6068] Length = 386 Score = 65.8 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 42/380 (11%), Positives = 99/380 (26%), Gaps = 39/380 (10%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTES-----LNILLKISGY 55 M + + Y+L R L+ + + + VI L ++ S+ E L ++ + Sbjct: 1 MTTIDRYVLTIFIRVLLICFVSLAGLFVVIDCLGNLDEFSNYGEKHAGGILGVIFEYYSA 60 Query: 56 LIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLF 115 + + +T + R EL + G S ++ V A ++++ Sbjct: 61 HVLGFFDRTIGLLAMVAAIFTVTWLQRTQELTALAAAGISPARAMRSVFIAAGIVALLGA 120 Query: 116 ISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI 175 + P+ R+ + + + + ++ + + Sbjct: 121 ANREFNLPQMRAKLGRNAQDWLGENSRRFVPKFDMRSDILISGASTVAKEQKIVAPNFLL 180 Query: 176 VDSRDTQTHKIYYAQSGSID----------LDRQAIILNDGEVHRKSPISKDISIMKFKS 225 D R Q + +I + + L G + + + Sbjct: 181 PDDRTEQLPVELVSWGRAIQAREALYQPATDEHPSGYLMRGVTQPLAVAQLSSVSLHNEP 240 Query: 226 YTLQ-----------------TESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETY 268 L + + L+ + Sbjct: 241 TILAPRDHRWLAPDECFVSSVVTFEQLAASNAWRQYLSTYELVTGLKT---RTIQPGADI 297 Query: 269 RSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHK 328 + H RL Q L + + L + + I + G F+ H Sbjct: 298 KVTLHARLVQPL----LDMTLLFLGLPLVLTKGNRNIFLAAAICLLLVGSFFIVVMTCHS 353 Query: 329 IEQNPYYIPILYLFLFCISS 348 + N P + +L + Sbjct: 354 LGSNYLLSPTMAAWLPLLIF 373 >gi|32473921|ref|NP_866915.1| permease [Rhodopirellula baltica SH 1] gi|32444458|emb|CAD74456.1| conserved hypothetical protein-putative permease [Rhodopirellula baltica SH 1] gi|327542994|gb|EGF29442.1| permease YjgP/YjgQ family protein [Rhodopirellula baltica WH47] Length = 398 Score = 65.8 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 48/398 (12%), Positives = 120/398 (30%), Gaps = 50/398 (12%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 IL I R F+++ + + + +I + + + +L++ + IP L Sbjct: 4 TRLTRTILFEILRIFVVALVVLTLLILLIAVGREL---FRKGLGAMAVLQLLPFAIPISL 60 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P V M + E+ + +G S + L++P + A LLS ++ Sbjct: 61 QHAVPATALFSVCCVYGRMAADGEISTVKASGISPLRLLQPAIVFAALLSPVAVYCSDMA 120 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 + +K++ + + + LE + + D I + + + + V + Sbjct: 121 VSWGKPGVKRVVLLSIEDIAYRLLERDHSYTSDHGFSIHVREIDGRRMISPRVTVRGKGD 180 Query: 182 QTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 A G + +D ++ + L D +V R + D + + Sbjct: 181 DAFT-VTASEGQLMMDEESLSLVLKLVDSQVIRGKGLQGDFYGEHQFEIPIGNALEETDV 239 Query: 238 IVLKANDQNLSFLLNP--------------------------------------NPNNPN 259 ++ L + N ++ Sbjct: 240 STRSPSELPLRLIRNERLRQRERTHAKIGELAAFTGFSLLTSRPAEIGGEKSSAIQSSLQ 299 Query: 260 YRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVF 319 L ++E +R + F L+ A + + V+ Sbjct: 300 SSRHRLTRLQTEPWRRWAEGFTCFFFVLVGAPLAIVAKTSDY---WTTFGMCFLPTILVY 356 Query: 320 WGFSYIIHKIEQNPYYIP-ILYLFLFCISSIFLLMIKK 356 + + + P +++ +S + +++I + Sbjct: 357 YPLYLLGLDQAKAGDMPPYGVWIGNVVLSGVGMMLIAR 394 >gi|154174487|ref|YP_001408138.1| permease YjgP/YjgQ [Campylobacter curvus 525.92] gi|153793102|gb|EAU00183.2| permease YjgP/YjgQ [Campylobacter curvus 525.92] Length = 342 Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 54/360 (15%), Positives = 108/360 (30%), Gaps = 20/360 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+L +F + I ++ +Q + S + LLK+ +++P V Sbjct: 1 MSRVNKYLLYNFLGTFASLFSTLFLIMSIVFFIQIARVTSYIEITFGELLKLYMFMLPRV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V P F + L +++ E ++I G+S ++ K L + LS L I + Sbjct: 61 LLFVVPIAFFVALAMTLFRLSKENESIVIFTLGSSPNSIAKFFLAFSAALSALLLIVAIV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI--KISKYNPNNTLQGIFIVDS 178 + P + + + D + + I + + Sbjct: 121 MIPIASELNSNFIDYKKTVAKLNLKPTQFGQKFSDWMVYVGSEGSDENGTIYKNIVMFNP 180 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + ++ AQ+ + + I L+ K FKS T++T + Sbjct: 181 FIKDSQRLIVAQNAKMINTKSNIELSLNNGKIYDMRGKVYHQSNFKSMTIRTAQSEKIND 240 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 V + L + + + + LFP+ L +I Sbjct: 241 VDSIKEYWL-------------EAKTSTKRKKDLSTYVLVALFPLATTLFAISFGIVTYR 287 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + F L F + S + F + I ++Y Sbjct: 288 YEKGAVYLGTFGILFGYFTLIMLLS-----PRPIIAIPGVFAAFFAAGVWFYKFKIMRRY 342 >gi|83816098|ref|YP_446193.1| hypothetical protein SRU_2087 [Salinibacter ruber DSM 13855] gi|83757492|gb|ABC45605.1| membrane protein, putative [Salinibacter ruber DSM 13855] Length = 473 Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 39/289 (13%), Positives = 107/289 (37%), Gaps = 14/289 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 ++ +LR + F ++F+ + +++ + ++ +++++++ Y + + Sbjct: 2 LRRLHWIVLRRLPGPFFGWLGTLMFLLLMQFLIRWLPEIAGKGIPVSVIVELIAYNLAYM 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + + + +I +TG S ++ P L +A LL + N+ Sbjct: 62 VVLAVPMSVLLAALMAFGELAESQYYTVIKSTGISFGQIVWPALVVAALLMGGMLYFNNV 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ +QL + + L +F+ +D I + P + Sbjct: 122 MLPEANHRARQLWSDIRGKRPGFELRPGIFYEDMEDYSILVQDRPPGTNKLIDVTIYDYT 181 Query: 181 TQTHKI--YYAQSGSIDLD----RQAIILNDGEVHRK-----SPISKDISIMKFKSYTLQ 229 + A+ G I+ R + L +GE+HR + S+ + F + ++ Sbjct: 182 QGRDRQAVIKAERGVIESSAGGARLTLTLRNGEMHRPLPPDANNQSERYERLTFDRHRIR 241 Query: 230 TESANSSTIVLKAND--QNLSFLLNPNPNNPNYRPELLETYR-SEFHKR 275 +N ++ + ++ + P + + R ++R Sbjct: 242 FTLSNVVFRRSESEETARSTRTMRTPRLLDTLDSLKTERDARYQTLYER 290 Score = 58.5 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 42/106 (39%), Gaps = 6/106 (5%) Query: 251 LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFI 310 + + ++ + +Y+ EF+K+ + L +IF ++ +R + I Sbjct: 346 IQNIRRDTEWQTRRIRSYQVEFYKKFSIALACLIFMVVGAPLGLAL----RRGGLATIGA 401 Query: 311 SLSISFGVFWGFSYIIHKIEQNPYYIPI--LYLFLFCISSIFLLMI 354 F ++W K+ + ++ P +++ +S L +I Sbjct: 402 VALGIFMLYWITLVQGEKLSERGFFPPWLGMWIANLLMSGAGLWLI 447 >gi|291279034|ref|YP_003495869.1| hypothetical protein DEFDS_0632 [Deferribacter desulfuricans SSM1] gi|290753736|dbj|BAI80113.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1] Length = 360 Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 58/359 (16%), Positives = 118/359 (32%), Gaps = 3/359 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK F Y+++ S + +FI+ I Q++Q +S +L IP Sbjct: 1 MKKFNKYLIKSYLNSLVAILIFILIIYTFFQVVQHTKYISRYNTPFLNILIYDLMKIPYS 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + + + +N EL+ + G + L + L + L + Sbjct: 61 IYQVFPVATSAAIVVTMLKLIKNNELIAYLSFGGRLRQIAVLFLSVNFLFFLILLYYSDA 120 Query: 121 IEPKCRS-TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 I PK K K L F+ D + I I N + + + Sbjct: 121 INPKIEKIRAKYKDEKIFFQKHTEKLTVTDFYFKDKESIISIDLINFDKKEFDGVTIYEK 180 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 D T I + L D ++ I + I + + Sbjct: 181 DKDTISIVKRAKKAKYLGNNIWEFQDFKIFDVKKIPTLLKIYDKYKLKSKILTKFIKIKP 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + + L + + E++R ++ ++ L ++ ++ + + Sbjct: 241 DEPKKLSFKEL-SRVIKVYESKGLSAESFRLIYYNKIAVPLILIVLTILLLPLTITISRS 299 Query: 300 RQRKKIHPIFISLSISF-GVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 Q K+ +S++I F + F + NP+ LF I + +L+ K++ Sbjct: 300 YQYIKVAAKSLSVTIIFWVSYSVFYSLGKNGVINPFLANFSLHILFFIFGMIILLSKER 358 >gi|78777193|ref|YP_393508.1| permease YjgP/YjgQ [Sulfurimonas denitrificans DSM 1251] gi|78497733|gb|ABB44273.1| permease YjgP/YjgQ [Sulfurimonas denitrificans DSM 1251] Length = 339 Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 124/358 (34%), Gaps = 19/358 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI + FL L + IA ++ +++ + ++ + K+ +++P + Sbjct: 1 MKIVQNYIRESVSILFLSIFLPLFSIASIVFLIKLATYTAVIQLTIFEMAKLFFFMLPEL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P F + T L ++ + E++++ G +IK VL A+ L L + + Sbjct: 61 LFYTLPISFFVAITLALFKLSNDNEIVVLFALGIRPKLIIKTVLKPALFLCAILLFNFFV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P ++ + + F+ + + L + N I+ ++ Sbjct: 121 LFPHAKTLSSNFISYKKSEAKFNLSASEFGHKFGEWLLYI--GKDNQNETYSDVILFNKK 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + A++ I D + L S + + + F++ + Sbjct: 179 QDEEVLIRAKNAQIINDSGILRLKLTSGEGYSYSDEKFTQINFETMFINDTMKTDLDKYE 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + L R + LFPV+ ++ A + Sbjct: 239 TPMEYWLPE-------------APSSKKRKMLISNILFSLFPVLSIFLAATIGIVHARHQ 285 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + K +F+ + + ++ + + I + + + + +L ++ +I K+ Sbjct: 286 KGKIYLFMFLGIIL----YYTLAVTLQLIIGSYALLVLAFGWLLGTYILYKKIIVAKF 339 >gi|289663727|ref|ZP_06485308.1| YjgP/YjgQ family permease [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 360 Score = 65.0 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 51/357 (14%), Positives = 126/357 (35%), Gaps = 15/357 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L +SFL + + ++ ++ ++ + ++ +LL G Sbjct: 1 MPKLDRYLLSDFTQSFLATLIVLLVVSVGGVLVDILGNIADGRIPARLLLSQVGLQFVAY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP++ P + L + R++E+ +I G +++P+L L + + + + + Sbjct: 61 LPIILPLALMLGLLLALARLYRDSEMAVITAIGVGPKRMLRPMLMLVVPVVVVIGLCSLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P T + + A ++ + LE F L + + + + G + + Sbjct: 121 LGPWASRTAEAMLEDANRSVLMAGLESGQFTPLSGGGVVYMQTISADGKGLGKVFMQRQQ 180 Query: 181 TQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISK--DISIMKFKSYTLQTESANS 235 + A G++ + + L+DG D +MKF S + Sbjct: 181 NDRINVVTADRGAMFFEGKTDRYLRLDDGYRTEGPAGGATLDYRLMKFASSDIALPDRTR 240 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + LL+ + T R++ H+RL L + F L+++ + Sbjct: 241 VHDANDPEVMWTTQLLS----------DERPTARAQLHERLAPPLLALAFALLTLPLSRS 290 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 ++ +I F++ + + + I + +++ Sbjct: 291 APRQQRYGRIMLAFLAYMVGTNLMIVGTQWIANGKTPAALGLWWLTLPLLAVAVWAY 347 >gi|167856193|ref|ZP_02478930.1| hypothetical protein HPS_08256 [Haemophilus parasuis 29755] gi|167852682|gb|EDS23959.1| hypothetical protein HPS_08256 [Haemophilus parasuis 29755] Length = 308 Score = 65.0 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 40/297 (13%), Positives = 96/297 (32%), Gaps = 15/297 (5%) Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + ++ P + L +E+ ++ G + L+K LFL+I + + Sbjct: 1 MAQLMLPLSLFIALLLTLGRFYAESEITVMRACGVGQSLLVKAALFLSIFTTAVAVYNVF 60 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + P + ++ A+A+ F+ L F + + + +F + + Sbjct: 61 WLTPWAINKQSEMLAEAKANPRFAALAAGQFMSAGGYVLFIDNIKDNTINDIYVFQPEQQ 120 Query: 180 DTQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + A+SG + Q + L + + +P + D I F +Y + Sbjct: 121 KKNKPSVVVAKSGELQGLPNGDQMLNLTNSTRYEGTPQTADFRISHFDNYNAYLGYQDVD 180 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + + LL+ ++E RL L + L+++ + Sbjct: 181 SDEKLVQRADFQKLLSE----------TSPEAQAELQWRLALILSVPLMALLAVPMSSVN 230 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + K+ P + I F + + N ++ + + L+ Sbjct: 231 PRQGRFAKLLPALLLYLIYFLLQSSLKSAGASGKLNVSL--LMPMVSVAFLVLGTLL 285 >gi|148651872|ref|YP_001278965.1| permease YjgP/YjgQ family protein [Psychrobacter sp. PRwf-1] gi|148570956|gb|ABQ93015.1| permease YjgP/YjgQ family protein [Psychrobacter sp. PRwf-1] Length = 449 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 32/384 (8%), Positives = 93/384 (24%), Gaps = 33/384 (8%) Query: 3 SFEL--YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 F Y L+ +V + + + I ++ ++ S+ ++ Sbjct: 69 IFYRSPYFLQQFM-PTGALLGAVVGLGLLANNSELI-VMRAAGLSIYRIVGWVLQPAFIF 126 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + + + + + + + TL +S Sbjct: 127 VILALLINQFILPQSNVKASQIRKPDTALLASVNGYWTLQNAPTEAGSTTDNKEGLSSEQ 186 Query: 121 I----------EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTL 170 +K+ A LT + + Sbjct: 187 AHNIIFIDYADANGNIGEVKRWHLDADNNLTAVSKATGGTYVPSLQQGQDKPVVAAQDQS 246 Query: 171 QGIFIVDSRDTQTHKIYYAQSGSIDL-----DRQAIILNDGEVHRKSPISKDISIM---- 221 + + + A +I ++ A L D + ++ Sbjct: 247 DSLANYQWQLDNVTTLKVADKAAILESDTLGNQPAAQLTDTQATSVDSDQSGQAMALTSQ 306 Query: 222 --------KFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFH 273 L ++ + +A D +L+ L N + L + F Sbjct: 307 PLVAKQAESTDVINLPISPSSVYLLTRRAEDLSLTQLYEHKRFNASQGTRSL-EHEVAFW 365 Query: 274 KRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP 333 ++L + +++ + I + F + + P Sbjct: 366 QKLLSPFSVLSLVIVACSFVFGSLRTHSLGLRIVVAIIFGLLFSYIQDLTSFVSLATGAP 425 Query: 334 YYIPILYLFLFCISSIFLLMIKKK 357 + ++ L + + +I+++ Sbjct: 426 PLL-MVLLPIIGSGLLGFYLIRRQ 448 Score = 59.2 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 31/198 (15%), Positives = 59/198 (29%), Gaps = 1/198 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y+ + + L + L + + V L + + S + L Y P L Sbjct: 19 RIISRYVKKNALFAMLFAVLGLWALQMVFAYLAELEDI-SDAYTYVDALTYIFYRSPYFL 77 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + L + N+EL+++ G S ++ VL A + I + I Sbjct: 78 QQFMPTGALLGAVVGLGLLANNSELIVMRAAGLSIYRIVGWVLQPAFIFVILALLINQFI 137 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ Q+ L L + +K ++ I Sbjct: 138 LPQSNVKASQIRKPDTALLASVNGYWTLQNAPTEAGSTTDNKEGLSSEQAHNIIFIDYAD 197 Query: 182 QTHKIYYAQSGSIDLDRQ 199 I + +D D Sbjct: 198 ANGNIGEVKRWHLDADNN 215 >gi|85374865|ref|YP_458927.1| permease [Erythrobacter litoralis HTCC2594] gi|84787948|gb|ABC64130.1| predicted permease [Erythrobacter litoralis HTCC2594] Length = 437 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 53/359 (14%), Positives = 124/359 (34%), Gaps = 11/359 (3%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI R + + + + ++L+ + V+ + ++ K+ G LIP + Sbjct: 32 IDRYIFRLTIVPMMAVFVLAASLLLLDKMLRLFDFVAVEGGPIGVVFKMLGALIPEYASL 91 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + + ++EL ++ G L++ + +L I+P Sbjct: 92 AIPLGLLLGILFAFRKLATSSELDVLRAVGMGYGRLLRVPYIITAILVAVNVALVFYIQP 151 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN-NTLQGIFIVDSRDTQ 182 R +QL + + + ++ F L D + ++I + N L+GIF S D Sbjct: 152 ISRYYYEQLEYELRSGALGASIKVGEFTTLADRMALRIEESEDNGRNLKGIFARVSNDKG 211 Query: 183 THKIYYAQSGSI-----DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 A+ GS D + L DG + + ++ ++ F + L + Sbjct: 212 QVLSISAREGSFLATTDSSDTIILRLTDGTIVQ-DTGNQTPRVLSFTRHDLPIDLPAIEQ 270 Query: 238 IVLK---ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + + L LL+ ++ + + ++ F+ RL + + + L+++ A Sbjct: 271 FRQRGDAEREYILPELLSIGWSDTESEAK-RDASQASFNFRLVEVVMMWLLPLLALSLAI 329 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + + + V + +P LF +++ Sbjct: 330 PPKRSTSALGVFVSIVMVVSYHKVNQYGEDVAALGRVDPIVALWGPFVLFAALILWMFW 388 >gi|166713424|ref|ZP_02244631.1| hypothetical protein Xoryp_18795 [Xanthomonas oryzae pv. oryzicola BLS256] Length = 360 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 125/357 (35%), Gaps = 15/357 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L +SFL + + ++ ++ ++ + ++ +LL G Sbjct: 1 MPKLDRYLLSDFTQSFLATLIVLLVVSVGGVLVDILGNIADGRIPARLLLSQVGLQFVAY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP++ P + L + R++E+ +I G +++P+L L + + + + + Sbjct: 61 LPIILPLALMLGLLLALARLYRDSEMAVITAIGVGPTRMLRPLLMLVVPVVVIIGLCSLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P T + + A ++ + LE F L + + + + G + + Sbjct: 121 LGPWASRTAEAMLEDANRSVLMAGLESGQFTPLSGGGVVYMQTISADGKGLGKVFMQRQQ 180 Query: 181 TQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISK--DISIMKFKSYTLQTESANS 235 + A G++ + + L+DG D +MKF S + Sbjct: 181 NDRIDVVTADRGALFFEGKTDRYLRLDDGYRTEGPAGGATLDYRLMKFASSDIALPDRTR 240 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + LL+ + R++ H+RL L + F L+++ + Sbjct: 241 LHDGNDPEVMWTTQLLS----------DERPAARAQLHERLAPPLLALAFALLTLPLSRS 290 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 ++ +I F++ + + + I + +++ Sbjct: 291 APRQQRYGRIMLAFLAYMVGTNLMIVGTQWIANGKTPAALGLWWLTLPLLAVAVWAY 347 >gi|78049236|ref|YP_365411.1| YjgP/YjgQ family permease [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325925501|ref|ZP_08186892.1| putative permease [Xanthomonas perforans 91-118] gi|78037666|emb|CAJ25411.1| putative YjgP/YjgQ family permease [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325544093|gb|EGD15485.1| putative permease [Xanthomonas perforans 91-118] Length = 360 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 51/357 (14%), Positives = 127/357 (35%), Gaps = 15/357 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L +SFL + + ++ ++ ++ + ++ +LL G Sbjct: 1 MPKLDRYLLSDFTQSFLATLIVLLVVSVGGVLVDILGNIADGRIPARLLLSQVGLQFVAY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP++ P + L + R++E+ +I G +++P+L L + + + + + Sbjct: 61 LPIILPLALMLGLLLALARLYRDSEMAVITAIGVGPRRMLRPMLMLVVPVVVVIGLCSLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P T + + A ++ + LE F L + + + + G + + Sbjct: 121 LGPWASRTAEAMLEDANRSVLMAGLESGQFTPLSGGGVVYLQTISADGKGLGKVFMQRQQ 180 Query: 181 TQTHKIYYAQSGSID---LDRQAIILNDGEVHRK--SPISKDISIMKFKSYTLQTESANS 235 + A G++ + + L+DG S + D +MKF S + Sbjct: 181 NDRIDVVTADRGAMFFEGKTDRYLRLDDGYRTEGPASGATLDYRLMKFASSDIALPDRTR 240 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + LL+ + R++ H+RL L + F L+++ + Sbjct: 241 VHDANDPEVMWTTQLLS----------DERPAARAQLHERLAPPLLALAFALLTLPLSRS 290 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 ++ +I F++ + + + I + +++ Sbjct: 291 APRQQRYGRIMLAFLAYMVGTNLMIVGTQWIANGKTPAALGLWWLTLPLLAVAVWAY 347 >gi|222823976|ref|YP_002575550.1| permease, YjgP/YjgQ family [Campylobacter lari RM2100] gi|222539198|gb|ACM64299.1| putative permease, YjgP/YjgQ family [Campylobacter lari RM2100] Length = 341 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 55/363 (15%), Positives = 111/363 (30%), Gaps = 26/363 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK Y+ + L + I ++ +Q + S SL L ++ YL+P Sbjct: 1 MKLIYKYLFNQFLNTMLSLFFTLFTIVSIVFFIQLAKITSYVEISLLELFQLYIYLLPKA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P F + T ++R E ++ G S + + +A +LS F+ + + Sbjct: 61 LAFTLPISFFIALTLSFYRLSRENESTVLFALGISPKFIASFFMKIAGVLSAFMLVVVLV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P +++ + R + L ++ N I ++ Sbjct: 121 FIPISFELFDNFVDYKKISTKINIKTGEFGQRYGEWLVFINTQDENNVYKNIIMYHPKKN 180 Query: 181 TQTHKIYYAQSGSIDLDRQ---AIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + S ++ + +LN G+ + + IS K + S + +T Sbjct: 181 EDDKEQIILASEGKLENQNGIVSFVLNQGKAYEFKEENWHISSFKNLLIKSKLYSKDLNT 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 +L+ Y LFP+ L ++ Sbjct: 241 KHFYDYWSDLNTSKEKAKEFVIYT---------------LIALFPLASVLFALSFGIVTY 285 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + IF + F + F P + + +F+ +S KK Sbjct: 286 RYEKGFAYFGIFAVIFAYFTLLVSFY--------KPPLLAVGVIFILFLSISAFYFKKKI 337 Query: 358 YTK 360 +K Sbjct: 338 LSK 340 >gi|163756953|ref|ZP_02164060.1| putative permease [Kordia algicida OT-1] gi|161323072|gb|EDP94414.1| putative permease [Kordia algicida OT-1] Length = 639 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 38/242 (15%), Positives = 83/242 (34%), Gaps = 13/242 (5%) Query: 24 VFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRN 83 + I + + I ++ ++ K Y P ++P+V P + + + Sbjct: 1 MCIFILQTVWLFIGELAGKGLDAGVIFKFLLYTTPKLIPLVLPLSILVSSIMTFGRFAES 60 Query: 84 TELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFS 143 E + +TG S ++ ++ ++L + F N + P L Sbjct: 61 YEFAAMKSTGISLQRAMRSLIIFIVILGVGTFFFSNSVIPWSEFKQYNLRKNLAKKKPAL 120 Query: 144 YLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSI------DLD 197 + E +F + + +KY N+ L I+ + +S D D Sbjct: 121 AIGEGVFNDIGNINIKVDNKYGDNDQLLDKVIIHQKSNDKKNRIVMKSKKGELKSSPDSD 180 Query: 198 RQAIILNDGEVHRKSPISKDISIMK-------FKSYTLQTESANSSTIVLKANDQNLSFL 250 ++L DG + + S+++ F Y + + + + + L A D N + Sbjct: 181 ILQMVLFDGNRYEDVKSNDPKSVLRMQHAKVSFDKYIMNVDLRDINKVDLDATDYNTYKM 240 Query: 251 LN 252 N Sbjct: 241 FN 242 >gi|288925668|ref|ZP_06419600.1| putative permease [Prevotella buccae D17] gi|288337606|gb|EFC75960.1| putative permease [Prevotella buccae D17] Length = 638 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 33/222 (14%), Positives = 82/222 (36%), Gaps = 2/222 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +++I + G F+ + F+ + + + I+ + S+ +L + Y+ ++ Sbjct: 5 KKLDIFIAKQFGLLFVGTFFICQFVLMMQFLWRYIDELIGKGLSMEVLAQFFWYMSLMLV 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P P + + ++ ++EL I G S + + ++F+ +++ F +N I Sbjct: 65 PQALPLAILLSSLITFGNLGESSELTAIKAAGISLMQTFRSLIFITVVVMGCSFYFQNNI 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN--NTLQGIFIVDSR 179 P+ I QL + + E +F+ + + + K N + + Sbjct: 125 GPQANMKITQLLISMKQKSPELEIPEGIFYDGIPNCNLYVQKKNVKTGKLYGIMIYRMTN 184 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIM 221 + I A SG + + L + + + Sbjct: 185 SYEDAAIILADSGMLQSTAEKKHLVLTLWSGEWFENMQSQEL 226 Score = 37.7 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 36/98 (36%), Gaps = 6/98 (6%) Query: 261 RPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFW 320 ++ + E + T +IF I A A++R+ P+ +S+ + F V++ Sbjct: 364 GDRIIRQHEIEAINKFTLAFSCLIFFFIG---APLGAIIRKGGLGVPVIVSV-LVFIVYY 419 Query: 321 GFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMIKK 356 +++ + + L + + + K Sbjct: 420 ILDNTGYRMARGGMWAVWFGKGLAPAVLIPLAAFVTYK 457 >gi|30468062|ref|NP_848949.1| probable permease YjgP/YjgQ family [Cyanidioschyzon merolae strain 10D] gi|30409162|dbj|BAC76111.1| probable permease YjgP/YjgQ family [Cyanidioschyzon merolae strain 10D] Length = 329 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 38/352 (10%), Positives = 92/352 (26%), Gaps = 31/352 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M FE YI + FL + + + + L + + SL++ +I + Sbjct: 1 MTIFEQYIWSHLWTPFLYALSACLALTFSAGALVDVMRQITQGLSLDMACQILCLQLVLS 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P N +L+ + +G +KP L ++ + Sbjct: 61 IHLGLPASCVFGGIFA----YANLDLMALRTSGIGVARWLKPSLIFGCMVGWLAWQWNEW 116 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P ++ +L + Q + K + + + Sbjct: 117 ALPLANYSLHKLQDQIQN-----------QITSKALVNQINHKLIYVKEWKPLHMNHCVM 165 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + ID D I ++ + T + Sbjct: 166 WDSEMNQLWMAKQIDWDGARWIAKQVVHYQWDDQFQLQLQSHVAKMEWPTAWISQQQWQP 225 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + L + + Y +++ + + LI A Sbjct: 226 MWMNVQT---LKCYKQVAEFNKHIAIRY----YQKYAFPISCGLLHLIGSSLASVSKKG- 277 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 FI I ++ F + + ++ ++ ++ F+L Sbjct: 278 --------FILSLIVLFGYYLFGFGCEALAESSQMSALMAGWMPVAGLFFVL 321 >gi|154491977|ref|ZP_02031603.1| hypothetical protein PARMER_01608 [Parabacteroides merdae ATCC 43184] gi|154088218|gb|EDN87263.1| hypothetical protein PARMER_01608 [Parabacteroides merdae ATCC 43184] Length = 655 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 29/184 (15%), Positives = 72/184 (39%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K ++L+ FLM+ +FI + + + I+ + + +L ++ Y ++ Sbjct: 5 KRLYTFMLQTFLPLFLMTFGICLFIVLMQFLWRYIDDMVGKGLGIPVLAEMFMYAALFLV 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PM P + + ++ ELL + + G S + +++P++ ++SI F +N Sbjct: 65 PMALPLAILLASLMTFGNLGERLELLAMKSAGVSLVHIMRPLIITISIISIGAFFFQNYA 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + L + + E +F+ + + + L ++ Sbjct: 125 MPVVQVKLYTLLWSMRQKSPELDIPEGVFYSEITGFNVYVKHKDTETGLLRDMMIYDYSE 184 Query: 182 QTHK 185 +K Sbjct: 185 GFNK 188 Score = 47.3 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 34/293 (11%), Positives = 86/293 (29%), Gaps = 6/293 (2%) Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + + L + L++ G S +L K S+ Sbjct: 189 VSVMVADSGRLKTSADKMFLVLSLFNGESFRSLDKQPSTAGTKSSVPYQRETFKSRDILI 248 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 S + + ++ +N+ + + + N S K Sbjct: 249 EFDANFSRTDESFMQNQFMGKNMHDLQIFIDSVSVRLDSIQNVNAKNVYETSYKKTLKKP 308 Query: 187 YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI--VLKAND 244 + ++ D + + + + +M F S +TI K++ Sbjct: 309 QDIKQNNVKDDSNSEKSDTKTTLETPKTDEPVIVMNFDSLYQAENPGKKATILTRAKSSI 368 Query: 245 QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKK 304 +N+ + + +E+HK+ T ++F I A A++R+ Sbjct: 369 ENMKADYFFKAATIGDEAYRVRRHLTEWHKKFTLSFACMVFFFIG---APLGAIIRKGGL 425 Query: 305 IHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIKK 356 P+ IS+ + + + + ++L ++ + + + K Sbjct: 426 GMPVVISVILFIFYYIIDNIGFKMARDGVWEAWQGMWLSSAILAPLGIFLTYK 478 >gi|303258296|ref|ZP_07344303.1| permease YjgP/YjgQ [Burkholderiales bacterium 1_1_47] gi|302859049|gb|EFL82133.1| permease YjgP/YjgQ [Burkholderiales bacterium 1_1_47] Length = 364 Score = 64.3 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 49/343 (14%), Positives = 110/343 (32%), Gaps = 22/343 (6%) Query: 22 FIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMN 81 + I I +++ +N + +L++ Y LP + + L Sbjct: 1 MLFSIVVTIGLVRILNQTAGGRYDTGSILEVVAYTSLINLPALISLALFLAVFMTLNRYW 60 Query: 82 RNTELLIIDNTGT-SRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLAL 140 R++E+ + + G S + I+PVL A+ + + + + P R+ ++ + Sbjct: 61 RDSEMFVWFSAGGLSLTSWIRPVLRFALPVVLVVAACSIAVSPWSRAQVQAYRDRFAQKE 120 Query: 141 TFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS--RDTQTHKIYYAQSGSI---D 195 S L F + + + ++ + + + + G I Sbjct: 121 DISKLSSGRFIEAKSGRQVFFLEGVDQEKGKVKTLLMVELKKDGSRSVLVSDRGHIENKP 180 Query: 196 LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST-IVLKANDQNLSFLLNPN 254 + I+L+DG + P S+ F+ Y ++ +S+ S K N + L+ Sbjct: 181 NGDRYIVLDDGRKYDTKPSGLGASVSDFREYEIRMDSSPSEVGANKKLNAMPIEDLI--- 237 Query: 255 PNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSI 314 SE R++ L + ++A + K + ++ I Sbjct: 238 -------KRTDNRAASELFWRISWPLVALNLA---LLAIPLSYNNPRSMKYYGQTAAVLI 287 Query: 315 SFGVFWGFSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMIK 355 S I + LY+ + L + Sbjct: 288 FILYLNALSIFQTWITQGKVGILGATLYMNVPVAVLTTFLFYR 330 >gi|294664573|ref|ZP_06729915.1| YjgP/YjgQ family permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292605657|gb|EFF48966.1| YjgP/YjgQ family permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 360 Score = 64.3 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 51/357 (14%), Positives = 127/357 (35%), Gaps = 15/357 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L +SFL + + ++ ++ ++ + ++ +LL G Sbjct: 1 MPKLDRYLLSDFTQSFLATLIVLLVVSVGGVLVDILGNIADGRIPARLLLSQVGLQFVAY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP++ P + L + R++E+ +I G +++P+L L + + + + + Sbjct: 61 LPIILPLALMLGLLLALARLYRDSEMAVITAIGVGPRRMLRPMLMLVVPVVVVIGLCSLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P T + + A ++ + LE F L + + + + G + + Sbjct: 121 LGPWASRTAEAMLEDANRSVLMAGLESGQFTPLSGGGVVYLQTISADGKGLGKVFMQRQQ 180 Query: 181 TQTHKIYYAQSGSID---LDRQAIILNDGEVHRK--SPISKDISIMKFKSYTLQTESANS 235 + A G++ + + L+DG S + D +MKF S + Sbjct: 181 NDRIDVVTADRGAMFFEGKTDRYLRLDDGYRTEGPASGATLDYRLMKFASSDIALPDRTR 240 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + LL+ + R++ H+RL L + F L+++ + Sbjct: 241 VHDANDPEVMWTTQLLS----------DERPAARAQLHERLAPPLLALAFALLTLPLSRS 290 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 ++ +I F++ + + + I + +++ Sbjct: 291 APRQQRYGRIMLAFLAYMVGTNLMIVGTQWIANGKTPAALGLWWLTLPLLAVAVWAY 347 >gi|21244280|ref|NP_643862.1| hypothetical protein XAC3555 [Xanthomonas axonopodis pv. citri str. 306] gi|21109928|gb|AAM38398.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 360 Score = 64.3 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 52/357 (14%), Positives = 127/357 (35%), Gaps = 15/357 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L +SFL + + ++ ++ ++ + ++ +LL G Sbjct: 1 MPKLDRYLLSDFTQSFLATLIVLLVVSVGGVLVDILGNIADGRIPARLLLSQVGLQFVAY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP++ P + L + R++E+ +I G +++P+L L + + + + + Sbjct: 61 LPIILPLALMLGLLLALARLYRDSEMAVITAIGVGPRRMLRPMLMLVVPVVVVIGLCSLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P T K + A ++ + LE F L + + + + G + + Sbjct: 121 LGPWASRTAKAMLEDANRSVLMAGLESGQFTPLSGGGVVYLQTISADGKGLGKVFMQRQQ 180 Query: 181 TQTHKIYYAQSGSID---LDRQAIILNDGEVHRK--SPISKDISIMKFKSYTLQTESANS 235 + A G++ + + L+DG S + D +MKF S + Sbjct: 181 NDRIDVVTADRGAMFFEGKTDRYLRLDDGYRTEGPASGATLDYRLMKFASSDIALPDRTR 240 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + LL+ + R++ H+RL L + F L+++ + Sbjct: 241 VHDANDPEVMWTTQLLS----------DERPAARAQLHERLAPPLLALAFALLTLPLSRS 290 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 ++ +I F++ + + + I + +++ Sbjct: 291 APRQQRYGRIMLAFLAYMVGTNLMIVGTQWIANGKTPAALGLWWLTLPLLAVAVWAY 347 >gi|315606454|ref|ZP_07881469.1| conserved hypothetical protein [Prevotella buccae ATCC 33574] gi|315251860|gb|EFU31834.1| conserved hypothetical protein [Prevotella buccae ATCC 33574] Length = 638 Score = 64.3 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 33/222 (14%), Positives = 82/222 (36%), Gaps = 2/222 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +++I + G F+ + F+ + + + I+ + S+ +L + Y+ ++ Sbjct: 5 KKLDIFIAKQFGLLFVGTFFICQFVLMMQFLWRYIDELIGKGLSMEVLAQFFWYMSLMLV 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P P + + ++ ++EL I G S + + ++F+ +++ F +N I Sbjct: 65 PQALPLAILLSSLITFGNLGESSELTAIKAAGISLMQTFRSLIFITVVVMGCSFYFQNNI 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN--NTLQGIFIVDSR 179 P+ I QL + + E +F+ + + + K N + + Sbjct: 125 GPQANMKITQLLISMKQKSPELEIPEGIFYDGIPNCNLYVQKKNVKTGKLYGIMIYRMTN 184 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIM 221 + I A SG + + L + + + Sbjct: 185 SYEDAAIILADSGMLQSTAEKKHLVLTLWSGEWFENMQSQEL 226 Score = 37.3 bits (84), Expect = 3.6, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 36/98 (36%), Gaps = 6/98 (6%) Query: 261 RPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFW 320 ++ + E + T +IF I A A++R+ P+ +S+ + F V++ Sbjct: 364 GDRIIRQHEIEAINKFTLAFSCLIFFFIG---APLGAIIRKGGLGVPVIVSV-LVFIVYY 419 Query: 321 GFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMIKK 356 +++ + + L + + + K Sbjct: 420 ILDNTGYRMARGGMWAVWFGKGLAPAVLIPLAAFVTYK 457 >gi|294625211|ref|ZP_06703852.1| YjgP/YjgQ family permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292600485|gb|EFF44581.1| YjgP/YjgQ family permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 360 Score = 64.3 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 51/357 (14%), Positives = 126/357 (35%), Gaps = 15/357 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L +SFL + + ++ ++ ++ + ++ +LL G Sbjct: 1 MPKLDRYLLSDFTQSFLATLIVLLVVSVGGVLVDILGNIADGRIPARLLLSQVGLQFVAY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP++ P + L + R++E+ +I G +++P+L L + + + + + Sbjct: 61 LPIILPLALMLGLLLALARLYRDSEMAVITAIGVGPRRMLRPMLMLVVPVVVVIGLCSLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P T + A ++ + LE F L + + + + G + + Sbjct: 121 LGPWASRTADAMLEDANRSVLMAGLESGQFTPLSGGGVVYLQTISADGKGLGKVFMQRQQ 180 Query: 181 TQTHKIYYAQSGSID---LDRQAIILNDGEVHRK--SPISKDISIMKFKSYTLQTESANS 235 + A G++ + + L+DG S + D +MKF S + Sbjct: 181 NDRIDVVTADRGAMFFEGKTDRYLRLDDGYRTEGPASGATLDYRLMKFASSDIALPDRTR 240 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + LL+ + R++ H+RL L + F L+++ + Sbjct: 241 VHDANDPEVMWTTQLLS----------DERPAARAQLHERLAPPLLALAFALLTLPLSRS 290 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 ++ +I F++ + + + I + +++ Sbjct: 291 APRQQRYGRIMLAFLAYMVGTNLMIVGTQWIANGKTPAALGLWWLTLPLLAVAVWTY 347 >gi|329943108|ref|ZP_08291882.1| hypothetical protein G5Q_0787 [Chlamydophila psittaci Cal10] gi|332287690|ref|YP_004422591.1| conserved hypothetical membrane protein [Chlamydophila psittaci 6BC] gi|313848264|emb|CBY17265.1| conserved hypothetical membrane protein [Chlamydophila psittaci RD1] gi|325506627|gb|ADZ18265.1| conserved hypothetical membrane protein [Chlamydophila psittaci 6BC] gi|328814655|gb|EGF84645.1| hypothetical protein G5Q_0787 [Chlamydophila psittaci Cal10] gi|328914943|gb|AEB55776.1| YjgP/YjgQ family protein [Chlamydophila psittaci 6BC] Length = 357 Score = 64.3 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 44/362 (12%), Positives = 119/362 (32%), Gaps = 16/362 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M ++ ++ L ++ I+ + + + ++ ++ +L+++ Y IP + Sbjct: 1 MPILWKVLIFRYLKTVTFCTLSLICISIISSLQEIVSYIA-KDVPYPTVLRLTAYQIPYL 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP + P + + ++ N ++ + +G S+ + PVL ++ + F + + Sbjct: 60 LPFILPISCFISAFTLFRGLSDNNQITFLKASGASQAIITFPVLMVSCAICCVNFYTCSE 119 Query: 121 IEPKCRSTIKQLSAKAQLALTF---SYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD 177 + CR + A + L++ R+ + N + + Sbjct: 120 LASICRFQTCKEIANMAMTSPTLLLQTLQKKESNRIFITVDHCAKSKFDNVIIALKRDKE 179 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKF-KSYTLQTESANSS 236 + K + + + +++ + S + ++ +S Sbjct: 180 IANVGLIKTIIPDVANDTVQARGVVMISKLPSTLTDQRSSNSKEYYIETLDEMLIPKITS 239 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 T+ + P + TY E +R+ L + +V + Sbjct: 240 TLFAGKSYMKTRTDYLPWKQ--LVKQSFSRTYLPETLRRIGIGLLCITLTYSGMVLGTYK 297 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R+ ++ IF + + + + P L LF+F +++ K Sbjct: 298 PRFRKSITLYCIFPVIDLILLI---------VGKNTSSLFPALMLFIFPQVVSWIVFAIK 348 Query: 357 KY 358 Y Sbjct: 349 AY 350 >gi|224534155|ref|ZP_03674735.1| permease, YjgP/YjgQ family [Borrelia spielmanii A14S] gi|224514580|gb|EEF84894.1| permease, YjgP/YjgQ family [Borrelia spielmanii A14S] Length = 355 Score = 63.9 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 43/355 (12%), Positives = 111/355 (31%), Gaps = 1/355 (0%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + ++ I +FL L + + + + + S +L I +P Sbjct: 2 KIDKLFVKSIILTFLSMNLLFMILIMLGDLFVNLLNYLEKNISFKDILYIYYLYLPKAFS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 F +N++ +++ E++ + + G S +++P++ +++ +S+ LF +N + Sbjct: 62 DGVALSFLFAISNLIGNLSMRNEIIGLFSCGVSLTRILRPIILISVFISVILFFFDNYLV 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + L + S + + IK + N + I+ + Sbjct: 122 IDTVAKRDLLIKNSVGNSGSSDKTIIIRDLAREIYNIKSYDIDENTFSNLMIIIKDSKDE 181 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 Y ++ + V I ++ + + ++ E T++L + Sbjct: 182 FQTRYDINKAKWKDNKWKLYGVREFVKVGRKIKENAYDVLDGTGIIKLEPDYIRTVMLSS 241 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + + L+N + + R+ ++ A Sbjct: 242 KALSFTKLVN-WISFLKSERLNYSDALFDLLNRVFFSFRLMLLSFTVGFIALALKKNIFI 300 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + FS++ N Y F I + F+ I +K Sbjct: 301 LSLLNSIAFAVVYVISIVIFSFLADLGYLNIYMASSFTTIFFLIINFFVYRIVRK 355 >gi|167752154|ref|ZP_02424281.1| hypothetical protein ALIPUT_00396 [Alistipes putredinis DSM 17216] gi|167660395|gb|EDS04525.1| hypothetical protein ALIPUT_00396 [Alistipes putredinis DSM 17216] Length = 492 Score = 63.9 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 43/278 (15%), Positives = 98/278 (35%), Gaps = 12/278 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK+ +L+ +++ I+F+ + + + I+ + ++++ Y + Sbjct: 1 MKTIYKLVLKSYLGPMVLTFFIIMFVLMMNVLWRYIDELVGKGLDPGTIIELLCYATINM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +PM P + + ++ N ELL + + G S +++P+L + +L++ F N Sbjct: 61 IPMALPLATLLAAIMTMGNLGENYELLAMKSAGMSLPKIMRPLLVVVSILAVGSFFIANN 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + ++ LFF D + I++ N L ++ Sbjct: 121 LVPYANKKFFRTIYDIRQMNQTLEFQDGLFFNGIDGMSIRVGHQNQETGLLTDVLIYDNR 180 Query: 181 T--QTHKIYYAQSGSIDLDRQAIILN----DGEVHRKSPISKDISIMKFKSYTLQTESAN 234 A SG I L L +GE + ++ S Sbjct: 181 NASGNMTTTVADSGYIRLSDDKRFLEITLFNGERYEQTRNSSQWYNKSSLQRNKFELQKA 240 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEF 272 + +I + + L N N + + + + E Sbjct: 241 NISISGFEMQRTDADLFN------NAQTKNISELQYEI 272 Score = 53.1 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 28/132 (21%), Positives = 55/132 (41%), Gaps = 6/132 (4%) Query: 227 TLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFG 286 TL S + + +N + + + + L + E+HK+L + +IF Sbjct: 328 TLDLRSKDRIWSQAVSAARNSRSMFSFDESQAKNALNQLYRSKVEWHKKLALPVTIIIFF 387 Query: 287 LISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLF 344 LI A A+VR+ PI IS+ I F +++ S K+ + + +L F Sbjct: 388 LIG---APLGAIVRRGGLGMPIVISV-IFFVIYYIISSSGEKMAKEGTWEAFYGTWLSAF 443 Query: 345 CISSIFLLMIKK 356 ++ + + + K Sbjct: 444 VLAPVAIYLTYK 455 >gi|62185346|ref|YP_220131.1| hypothetical protein CAB733 [Chlamydophila abortus S26/3] gi|62148413|emb|CAH64180.1| conserved hypothetical membrane protein [Chlamydophila abortus S26/3] Length = 357 Score = 63.9 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 43/362 (11%), Positives = 116/362 (32%), Gaps = 16/362 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M ++ ++ L ++ I+ + + + ++ ++ +L+++ Y IP + Sbjct: 1 MPILWKVLIFRYLKTVTFCTLSLICISIISSLQEIVSYIA-KDVPYPTVLRLTAYQIPYL 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP + P + ++ ++ N ++ + +G S+ + PVL ++ + F + + Sbjct: 60 LPFILPISCFISAFSLFRGLSDNNQITFLKASGASQAIITFPVLMVSCAICCVNFYTCSE 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIK---ISKYNPNNTLQGIFIVD 177 + CR + A + L+ + N + Sbjct: 120 LASICRFQTCKEIANMAMTSPTLLLQTLQKKESNRIFITVDHCAKSKFDNVITALKRDKE 179 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKF-KSYTLQTESANSS 236 + K + + + +++ + S + ++ +S Sbjct: 180 IANVGLIKTIIPDVANDTVQARGVVMISKLPSTLTDQCSSHSKEYYIETLDEMLIPKITS 239 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 T+ + P + TY E +R+ L + +V + Sbjct: 240 TLFAGKSYMKTRTDYLPWKQ--LVKQSFSHTYLPETLRRIGIGLLCITLTYSGMVLGTYK 297 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R+ ++ IF + + + + P L LF+F +++ K Sbjct: 298 PRFRKSITLYCIFPVMDLILLI---------VGKNTSSLFPALTLFIFPQVISWIVFAIK 348 Query: 357 KY 358 Y Sbjct: 349 AY 350 >gi|320088912|emb|CBY98670.1| Lipopolysaccharide export system permease protein lptG [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 220 Score = 63.9 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 24/208 (11%), Positives = 55/208 (26%), Gaps = 2/208 (0%) Query: 150 FFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVH 209 + + ++ + + + YA S D + + L+ + Sbjct: 13 WAKDGNNFVYIERVKGDEELAGISIYAFNDQRRLQSVRYAASAKFDPEHKVWRLSQVDES 72 Query: 210 RK-SPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETY 268 +P S ++ + L + ++S L N + Y Sbjct: 73 DLQNPKQITGSQTVSGTWKTNLTPDKLGVVALDPDALSISGLHN-YVKYLKSSGQDAGRY 131 Query: 269 RSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHK 328 + ++ Q L + L+++ IS F V + Sbjct: 132 QLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPMGVRVVTGISFGFVFYVLDQIFGPLTL 191 Query: 329 IEQNPYYIPILYLFLFCISSIFLLMIKK 356 + P + L LM++K Sbjct: 192 VYGIPPIVGALLPSASFFLISLWLMLRK 219 >gi|255012652|ref|ZP_05284778.1| hypothetical protein B2_02000 [Bacteroides sp. 2_1_7] Length = 641 Score = 63.9 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 73/177 (41%) Query: 8 ILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 +L+ FLM+ +FI + + + I+ + + +L ++ Y ++PM P Sbjct: 1 MLQTFLPLFLMTFGICLFIVLMQFLWRYIDDMVGKGLGIPVLAEMFMYAALFLVPMALPL 60 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 + + ++ ELL + + G S I +++P++ + +S+ F +N + P + Sbjct: 61 AILLASLMTFGNLGERLELLAMKSAGVSLIHIMRPLIVTLLFVSVGAFFFQNNVMPVVQV 120 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTH 184 + L + + E F++ + + K +P + L ++ + Sbjct: 121 KLYTLLYSMRQKSPELDIPEGSFYKDIPGFNVYVKKKDPKDGLLKDVMIYDYSEGFN 177 Score = 44.2 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 37/95 (38%), Gaps = 4/95 (4%) Query: 263 ELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGF 322 + + +E+HK+ T ++F I A A++R+ P+ IS+ + + Sbjct: 371 YKVRRHLTEWHKKFTVSFACIMFFFIG---APLGAIIRKGGLGVPVVISVILFIFYYIID 427 Query: 323 SYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIKK 356 + + ++L ++ + + + K Sbjct: 428 NMGFKMARDGVWDAWEGMWLSSVVLTPMGIFLTYK 462 >gi|111115643|ref|YP_710261.1| hypothetical protein BAPKO_0861 [Borrelia afzelii PKo] gi|110890917|gb|ABH02085.1| hypothetical protein BAPKO_0861 [Borrelia afzelii PKo] Length = 355 Score = 63.5 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 41/355 (11%), Positives = 108/355 (30%), Gaps = 1/355 (0%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + ++ I +FL L + + + + + SL + I +P Sbjct: 2 KIDKLFVKSIILTFLSMNLIFMILIILGDLFVNLLNFLEKNISLKDIFYIYYLYLPKAFS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 F +N++ +++ E++ + + G +++P++ +++ +S+ LF +N + Sbjct: 62 DGVALSFLFAISNLIGNLSMRNEIIGLFSCGVPLTRILRPIILISVFISVVLFFFDNYLV 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + L + + + IK + N + I+ + Sbjct: 122 IDTVAKRDLLIKNSIGNNGSIDKTIIIRDLAREIYNIKSYDIDENAFSNLMIIIKDSKDE 181 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 Y ++ + V I ++ + + ++ E T++L + Sbjct: 182 FQTRYDINKAEWKDNKWKLYGIREFVKVGRKIKENAYDVLDGTGIIKLEPDYIRTVMLSS 241 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 N + L+N + + R+ ++ A Sbjct: 242 KALNFTKLIN-WISFLKSEHLNYSDALFDLLNRIFFSFRLMLLSFTVGFIALALKKNIFI 300 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + FS++ N Y F I + + I +K Sbjct: 301 LSLLNSIAFAVVYVISIVIFSFLADLGYLNIYVASSFTTIFFLIINFLVYRIVRK 355 >gi|313682233|ref|YP_004059971.1| permease yjgp/yjgq family protein [Sulfuricurvum kujiense DSM 16994] gi|313155093|gb|ADR33771.1| permease YjgP/YjgQ family protein [Sulfuricurvum kujiense DSM 16994] Length = 340 Score = 63.5 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 56/358 (15%), Positives = 129/358 (36%), Gaps = 18/358 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YIL + F L + IA VI +++ + +L+ + K+ +++P + Sbjct: 1 MDKLRRYILSNLSILFFSIFLPLFAIASVIFMIKLATYTAVIQITLSEMAKLYLFVVPEL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P F + L ++ + E++++ + G S + + + +L + LL L + Sbjct: 61 LFYTLPIAFVVGGALALYRLSNDNEMVVVFSLGISPLFVAR-ILAVPALLLSLLLFVNFV 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + I + + A L + F D + I+K +P + + G I+ ++ Sbjct: 120 VVTPYIKIISANFLEKKRAEAKFNLGASEFGHHFGDWMLFINKNDPQSRVFGDVILFNKS 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + A + + + L S + + M FK+ + + + + Sbjct: 180 MKDEILIKADKAELINKQGVLQLRLDNGVSYSYDNILLRTMLFKTGYINDKLSTDPMVYR 239 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 D + L +R +F LIS+ +V Sbjct: 240 NTLDYWTNNELRERKT-----------------QRFITNTLLSLFPLISVFLMIALGIVH 282 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 R + I++ L +S F+ + I + + ++L S + ++ ++ Sbjct: 283 ARHQKRWIYLWLFLSIVGFYAAAIITQQWLGFHTIWVVTLVWLIITYSFYKRLVGSRF 340 >gi|332708722|ref|ZP_08428694.1| putative permease [Lyngbya majuscula 3L] gi|332352576|gb|EGJ32144.1| putative permease [Lyngbya majuscula 3L] Length = 230 Score = 63.5 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 30/227 (13%), Positives = 72/227 (31%), Gaps = 14/227 (6%) Query: 4 FELYILRCIGRSFLMSCLFIVFI-AWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + YI + FL I V + + ++ S I ++ P + Sbjct: 1 MDRYIAAELIPPFLFGVGGFSSIGVAVGSLFDMVVKITELGLSWTIAAQVVLLKFPEFMS 60 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + T + ++ ++EL+ + + G S L+ P L L+++++ F+ +I Sbjct: 61 YALPISVLLATLIAYSRLSNDSELIALRSCGVSLYRLVAPALVLSLVVTGITFLFNELIV 120 Query: 123 PKCRS-------------TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNT 169 P ++ + N + ++ Sbjct: 121 PAANYQATITLEKALNQEKPAFDENGILYPEYQTFPQPNGTTTQTIKRLFYANGFDGQTM 180 Query: 170 LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK 216 + S + +KI ++S + + G ++ SP + Sbjct: 181 KDLTVLEWSNLGKLNKIILSESALWNSKQNTWDFFHGSIYFISPNTS 227 >gi|34557088|ref|NP_906903.1| hypothetical protein WS0675 [Wolinella succinogenes DSM 1740] gi|34482803|emb|CAE09803.1| conserved hypothetical protein [Wolinella succinogenes] Length = 345 Score = 63.5 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 42/356 (11%), Positives = 109/356 (30%), Gaps = 17/356 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + + Y+ + F + FI+ VI ++ + S L ++ Y +PT+ Sbjct: 1 MGNLKKYLFGSFAQLFFPIFAVLFFISSVILFIKIAGVTFVVKMSFGELFELYLYSLPTM 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P F + L +++ EL ++ + G + + L++L+S+FL + Sbjct: 61 IFFTIPVTFFSASVISLAKLSQEYELPVLFSLGIDPLRFSRLFFPLSLLVSLFLLLVSLA 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + ++ + +L + L + + + S D Sbjct: 121 LVPLSNEAYDRFLDHKKSSVNINLKPAEFGQKLGNWLVYVGDMDEGEKRYKEVVMFSSND 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 A+ ++ + L I + + ++ + L Sbjct: 181 LGRESFILAKEALVESMEGNLELKLFRGSAYFKEELHIKRVDYAQMLIRDSAFKEGGASL 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + + R + + LFP+ + + Sbjct: 241 GIM---------GYWKQALGGEKGSDKVRRKLSSSILISLFPLASLFFIPLLGIMHPRFQ 291 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + I+ I +G+ I N + ++L + + ++ Sbjct: 292 KNYSYFYVIIATGIFYGLV--------HIASNHLPLAGIFLIPLIWLGVGYGLYRR 339 >gi|213423383|ref|ZP_03356371.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 285 Score = 63.5 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 38/274 (13%), Positives = 97/274 (35%), Gaps = 19/274 (6%) Query: 83 NTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTF 142 +E+ ++ G S+ L+K + LA+ I ++ P ++ A+A+ Sbjct: 1 ESEITVMHACGLSKAVLVKAAMVLALFTGILAAVNVMWAGPWSSKHQDEVLAEAKANPGM 60 Query: 143 SYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT--HKIYYAQSGSI---DLD 197 + L + F + + + + + +F+ R + A SG + Sbjct: 61 AALAQGQFQQATNGSSVLFIESVDGSDFHDVFLAQIRPKGNARPSVVVADSGHLTQLRDG 120 Query: 198 RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNN 257 Q + LN G + + +D I F++Y + + ++ L N + + Sbjct: 121 SQVVTLNKGTRFEGTALLRDFRITDFQNYQAIIGHQAVALDPNDTDQMDMRTLWNTDND- 179 Query: 258 PNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFG 317 R+E H R+T + L+ + ++ ++ + ++ + Sbjct: 180 ---------RARAELHWRITLVFTVFMMALM---VVPLSVVNPRQGRVLSMLPAMLLYLL 227 Query: 318 VFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 F + I + P+++++ + + L Sbjct: 228 FFLIQTSIKSNGGK-GKLDPVIWMWAVNLIYLAL 260 >gi|157736891|ref|YP_001489574.1| hypothetical protein Abu_0640 [Arcobacter butzleri RM4018] gi|157698745|gb|ABV66905.1| conserved hypothetical membrane protein [Arcobacter butzleri RM4018] Length = 355 Score = 63.5 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 49/360 (13%), Positives = 105/360 (29%), Gaps = 12/360 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YIL+ +F++ + + I LQ + S N+ L Y Sbjct: 1 MSILSKYILKKYLINFIIVLISLELFFVGIDYLQNFKNI---PASANLQLLYILYNSFFT 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P L +N E + + G +R + PV+ ++I L I L + Sbjct: 58 LTLALPLSIVFGWIVTLVLFIKNNEFVAFNALGATRKNIFMPVVIVSISLLITLIFLQMT 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 K FS + ++F + ++ + I I + Sbjct: 118 PLAYSYEQ----KRKILNDEYFSNTKSDIFLKYNEYYVYFQKLLPLEKKAENIHIYKVKG 173 Query: 181 TQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + D+ ++N E + D+ KF + Sbjct: 174 DNLVETIIGEKAYFQNDKWYVVDVKVINKPENIDINNSKLDVRYEKFLHTLEGFKPKILD 233 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + +D ++ ++ + + R+ + +L F + ++ A Sbjct: 234 NVYESKSDFSIMDAVSALI-LLKDQGMNTQKIRTILYNQLIIPFFVIPILILVYSFASLN 292 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + K I ++ F+ + + I +L + KK Sbjct: 293 SRFFNMAKFVSFSIFGTLIVWGFFFLVFRLTSSGTVIPEISMLLTMFIWVIFSIYFYNKK 352 >gi|153820469|ref|ZP_01973136.1| membrane protein, putative [Vibrio cholerae NCTC 8457] gi|126508986|gb|EAZ71580.1| membrane protein, putative [Vibrio cholerae NCTC 8457] Length = 225 Score = 63.5 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 76/222 (34%), Gaps = 5/222 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + ++ + S +++L I G +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASDGEIPTSMILSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LA++ + + + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + L + + L++ F R D + N L +F+ Sbjct: 122 PWSQDKEAHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLYNVFVAQLAPRD 181 Query: 183 THK-----IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDIS 219 + + + RQ I L DG + P D Sbjct: 182 SILPSVMFSHSGDVKELSDGRQIITLYDGTRYEGVPTRVDYM 223 >gi|282879343|ref|ZP_06288087.1| putative membrane protein [Prevotella buccalis ATCC 35310] gi|281298540|gb|EFA90965.1| putative membrane protein [Prevotella buccalis ATCC 35310] Length = 635 Score = 63.5 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 28/204 (13%), Positives = 78/204 (38%), Gaps = 2/204 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +L+I + G F + F+ + + + ++++ S+ ++ + Y+ ++ Sbjct: 5 KKLDLFIAKQFGLLFAGTFFICQFVLMMQFLWRYVDVLIGKGLSMEVMAQFFWYMGLFLV 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P P + + ++ ++EL I + G S + + ++ +++++ F +N + Sbjct: 65 PQALPLAILLASLITFGNLGESSELTAIKSAGISTMRTFRSLIVISVVVCFCSFYFQNYV 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN--NTLQGIFIVDSR 179 P + QL + E +F+ + + + K + + + + Sbjct: 125 GPSANMKMAQLMISMSQKNPELEIPEGIFYDGIPNSNLYVQKKDMDTGKLYGIMIYRMTG 184 Query: 180 DTQTHKIYYAQSGSIDLDRQAIIL 203 + I A SG + L Sbjct: 185 SYEDQAIILADSGMLQTTADKKHL 208 Score = 36.5 bits (82), Expect = 6.2, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 37/110 (33%), Gaps = 7/110 (6%) Query: 251 LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFI 310 LN + LL + E + T L +IF I A A++R+ P+ + Sbjct: 353 LNFRSMITSDGDRLLREHYIEMINKFTLALTCIIFFFIG---APLGAIIRKGGLGIPVIV 409 Query: 311 SLSISFGVFWGFSYIIHKIEQNPYYI----PILYLFLFCISSIFLLMIKK 356 S+ + + + + + + + L ++S + Sbjct: 410 SVLVFIVYYLLDNTGYRMARGDMWTVEFGKGLAPAVLIPLASFVTYKANR 459 >gi|261879842|ref|ZP_06006269.1| conserved hypothetical protein [Prevotella bergensis DSM 17361] gi|270333501|gb|EFA44287.1| conserved hypothetical protein [Prevotella bergensis DSM 17361] Length = 642 Score = 63.5 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 81/222 (36%), Gaps = 2/222 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +++I R G FL + F+ + + + ++ + S+ IL + Y+ ++ Sbjct: 6 KKLDIFITRQFGLLFLGTFFICQFVLMMQFLWRFVDDLIGKGLSMEILAQFFWYMALMLV 65 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P P + + ++ ++EL I G S + + ++ + +++ + F +N I Sbjct: 66 PQAFPLAILLSSLITFGNLGESSELTAIKAAGISLMQSFRSLILITMIICLGSFYFQNNI 125 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN--NTLQGIFIVDSR 179 P + QL + + E +F+ + + + K + + ++ Sbjct: 126 GPMANMKLAQLLFSMKQKSPELEIPEGVFYDGIPNTNLYVQKKDVKTGKLYGIMIYRMTQ 185 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIM 221 + I A SG + L + + + Sbjct: 186 SYEDAAIILADSGMLQSTADKKHLLLSLWSGEWFENMQNQQL 227 >gi|325282782|ref|YP_004255323.1| permease YjgP/YjgQ family protein [Deinococcus proteolyticus MRP] gi|324314591|gb|ADY25706.1| permease YjgP/YjgQ family protein [Deinococcus proteolyticus MRP] Length = 402 Score = 63.1 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 29/232 (12%), Positives = 60/232 (25%), Gaps = 2/232 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YIL + L L + + + ++ + GY +P Sbjct: 1 MSRINRYILSELIPPLLAGVLLFTALLSFGYFFVSSQWL--QGVAPGLVAQWIGYQVPDT 58 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V P + T +N EL+ + + G +PV + +LL++ Sbjct: 59 LVKVLPMAAVLMTIVAFGRLNTERELVALQSGGIGLGQAGRPVALIGLLLALLSLWLSLW 118 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + PK + L S + LQ + Sbjct: 119 VAPKANVETRSLYWDVMTGSGLSSMAGRTLDLGGGLNVYWAGYDPATRKLQNVRAERWSK 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTES 232 ++ + + + L D + + + + Sbjct: 179 DDPKRVELVFAREGTFEDNLLRLTDYQAFTVNYAAAAELAAGAQQKQPDLPQ 230 >gi|47155054|emb|CAE85253.1| putative permease [Escherichia coli] Length = 227 Score = 63.1 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 53/222 (23%), Positives = 96/222 (43%), Gaps = 3/222 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + I QL ++Q L L F D+ I + +N ++ + Sbjct: 121 GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST 180 Query: 181 TQTHKIYYAQSGSIDL---DRQAIILNDGEVHRKSPISKDIS 219 +I+ A+S + ++ ++L++G + +D + Sbjct: 181 ANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDN 222 >gi|289806566|ref|ZP_06537195.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 219 Score = 63.1 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 26/200 (13%), Positives = 72/200 (36%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ + ++ + +P + + Sbjct: 7 LDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGNYDALGAGMYTLLSVPKDIQI 66 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 67 FFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAP 126 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+A + ++ L+ + ++ + + Sbjct: 127 QGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELAGISIYAFNDQRRL 186 Query: 184 HKIYYAQSGSIDLDRQAIIL 203 + YA S D + + L Sbjct: 187 QSVRYAASAKFDPEHKVWRL 206 >gi|257462588|ref|ZP_05626998.1| hypothetical protein FuD12_01969 [Fusobacterium sp. D12] Length = 270 Score = 63.1 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 38/271 (14%), Positives = 96/271 (35%), Gaps = 6/271 (2%) Query: 89 IDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEEN 148 +++ G ++KP+L+L F+ + I P+ ++ LS+K L+E Sbjct: 1 MNSIGMDIRAILKPILYLGFASMFFILFLQESIIPRSYIKLQYLSSKIAYENPVFQLKER 60 Query: 149 LFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEV 208 F ++ + I K + +GI I ++ T + + D +I+L Sbjct: 61 TFMNNLENYSLYIDKVGRDKHAKGILIFENDKKSTFPVVLVGHEAYWRD-SSIVLEKANF 119 Query: 209 HRKSPISKDISIMKFKSYTLQTES--ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLE 266 F+ ++ ++ ++ V + +++ LL + Sbjct: 120 ISFDEKGVRKLTGSFEDKRVELQAYFSDLKIKVKETEMMSIATLLQEMKGKTKEEKLI-- 177 Query: 267 TYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYII 326 Y+ E H++L V+ ++ + + ++ I +++ + + Sbjct: 178 -YKVEIHRKLALPFSSVMLSMLGVFLSIGHQRSGKKAGILVGILTIFFYISLLNIGIVLA 236 Query: 327 HKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + L L + L ++KK+ Sbjct: 237 NVGKIPILLGVWLPNLLLAALTYRLYLVKKR 267 >gi|319956628|ref|YP_004167891.1| permease yjgp/yjgq family protein [Nitratifractor salsuginis DSM 16511] gi|319419032|gb|ADV46142.1| permease YjgP/YjgQ family protein [Nitratifractor salsuginis DSM 16511] Length = 340 Score = 62.7 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 41/360 (11%), Positives = 128/360 (35%), Gaps = 22/360 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YIL +++L+ L + + +I ++Q L S L+++ GY++P + Sbjct: 1 MGKTRRYILWSFAKAYLLVFLPFLLVVSLIFVIQLSILSSRVNLEFRELVQLFGYMLPEI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 P N T + E + + + G + +++ ++ +L + L + + Sbjct: 61 FFYTVPLSLIAALANTFTRFSEENEFIALFSLGHTPGKVLRFMIPTLLLFTALLLVLSVM 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ + + ++A + N + ++ + + N+T + + + + Sbjct: 121 LYPQMKQK-LNHFKRQKIAEATLNISPNKLSQNFGSYHVFVESKDANDTYRNMVLFNQGT 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++++ A+ G + D + L ++ K + + ++ + N ++ Sbjct: 180 KGAYQLFIAREGRVANDGKRFTLTLRNGTGETSDPKKVENLHYRELDIYQYPRNVYQSIV 239 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + + L + + + FG+I+ + R Sbjct: 240 TSREYWKKALHDKGRRGKL------------LYLIFVSLTPILAFGIIAALTFYNPRYQR 287 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 +L++ + I Q +P+ + + ++ + +++++ + Sbjct: 288 SLSIAVIFITALAVY---------LPAAILQKSGSVPLFIALVIFLLALGIFLLRRRVLR 338 >gi|315636068|ref|ZP_07891325.1| conserved hypothetical protein [Arcobacter butzleri JV22] gi|315479637|gb|EFU70313.1| conserved hypothetical protein [Arcobacter butzleri JV22] Length = 355 Score = 62.7 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 49/360 (13%), Positives = 105/360 (29%), Gaps = 12/360 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YIL+ +F++ + + I LQ + S N+ L Y Sbjct: 1 MSILSKYILKKYLINFIIVLISLELFFVGIDYLQNFKNI---PASANLQLLYILYNSFFT 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P L +N E + + G +R + PV+ ++I L I L + Sbjct: 58 LTLALPLSIVFGWIVTLVLFIKNNEFVAFNALGATRKNIFMPVVIVSISLLITLIFLQMT 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 K FS + ++F + ++ + I I + Sbjct: 118 PLAYSYEQ----KRKILNDEYFSNTKSDIFLKYNEYYVYFQKLLPLEKKAENIHIYKVKG 173 Query: 181 TQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + D+ ++N E + D+ KF + Sbjct: 174 DNLVETIIGEKAYFQNDKWYVVDVKVINKPENIDINNSKLDVRYEKFLHTLEGFKPKILD 233 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + +D ++ ++ + + R+ + +L F + ++ A Sbjct: 234 NVYESKSDFSIMDAVSALI-LLKDQGMNTQKIRTILYNQLIIPFFVIPILILVYSFASLN 292 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + K I ++ F+ + + I +L + KK Sbjct: 293 SRFFNMAKFVSFSIFGTLIVWGFFFLVFRLTSSGTIIPEISMLLTMFIWMVFSIYFYNKK 352 >gi|217322882|ref|YP_002327178.1| hypothetical protein ABBFA_003302 [Acinetobacter baumannii AB307-0294] gi|213986547|gb|ACJ56846.1| hypothetical protein ABBFA_003302 [Acinetobacter baumannii AB307-0294] Length = 294 Score = 62.7 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 38/284 (13%), Positives = 89/284 (31%), Gaps = 16/284 (5%) Query: 74 TNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLS 133 V + + E+ +++ +G SR L + ++ + ++ + + + P ++L+ Sbjct: 1 MLVFGRLYVDHEMAVLNGSGVSRHQLARLLIPMTLVYMVCQSVLMLWMTPWGLREFEKLT 60 Query: 134 AKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGS 193 + F + F S L+ IF + + Sbjct: 61 TTQAVRTGFDLVRPREFISSGPYTIYAGSLSEDRKNLKDIFFYQRAAKEGKPDVMILAKE 120 Query: 194 IDLDR------QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAND-QN 246 + L G + P + +F+SY L+ E+ + + Sbjct: 121 ATRVEVANDTANVVDLVQGRRYEIFPGQPKYTQAEFQSYRLRLENDKDVKFESGDVEALS 180 Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 S L + RSE RL +I ++S+ ++ + ++ Sbjct: 181 TSKLFSKA---------NDPVVRSELGWRLFGPFTIIIALMLSVALSEVSPRQGRYYRLI 231 Query: 307 PIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 P + + I K E + + P+ L +++F Sbjct: 232 PSIFIFASLIVLMIAIKTRISKGELDIWAYPVALLVYAIAAALF 275 >gi|33519520|ref|NP_878352.1| putative inner membrane protein [Candidatus Blochmannia floridanus] gi|33517183|emb|CAD83565.1| putative inner membrane protein; predicted permease [Candidatus Blochmannia floridanus] Length = 360 Score = 62.7 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 45/355 (12%), Positives = 115/355 (32%), Gaps = 2/355 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 E YI + + + M L + ++ +I+++ + T S+ + I Sbjct: 5 NILERYIKKYVLLNIFMIFLIFISLSSIIRLVDELRNFQKQTYSVFEIFFCIFLNIIKDF 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + + L + EL+I+ G S + + V+ +I + + I + Sbjct: 65 ELFLSLSTLLGGVLGLGILELRNELIIMKVFGLSNLQINLSVIKTSIFIVLLYVIYNIWL 124 Query: 122 EPKCRS-TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + K F +NL+ + +I ++ L GI + + Sbjct: 125 LPYSQYLLCSHQHYKQYNVYLFPEKNKNLWLMDSGNSFIHVNYMLTTQDLLGINLYHFTE 184 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + K + +D + N E+ + + + A S I + Sbjct: 185 ERQLKRIIYIEKATYIDNSWSVSNINELEFVDKMQFLNRKILSYEWNTTLTPAILSMITV 244 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + ++S L+ + + + Y+ F ++ +F V+ I+++ + + Sbjct: 245 NPHFLSISKLI-CCIKYFDVLGQNSKYYQLIFWDKIFSPIFGVMMLTIALLYSYGPFYKK 303 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + F V I+ + + + L + + + + Sbjct: 304 KISFRLFFGGIIGFVFYVLHQIFEILSIVYNITPIVGSIILIMLFLMINTIFLRN 358 >gi|119953585|ref|YP_945795.1| hypothetical protein BT0808 [Borrelia turicatae 91E135] gi|119862356|gb|AAX18124.1| hypothetical protein BT0808 [Borrelia turicatae 91E135] Length = 355 Score = 62.3 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 35/352 (9%), Positives = 102/352 (28%), Gaps = 1/352 (0%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + + I +FL V + +I + + S++ ++ I +P Sbjct: 2 KVDKLFVNNISLTFLFMNFLFVILIVLIDLFTNLFNYLDHNLSISDIVYIYYLYLPKCFS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 F +N++ +++ E++ + + G S +++ ++ L++ +S+ LF +N + Sbjct: 62 DGLALSFLFAVSNLIGNLSMRNEIIGLFSCGISISRILRSIIMLSVFISVMLFFFDNYLV 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + + + + + IK + + I+ ++ Sbjct: 122 IDTIAKRDAFLKNSVGNQGANDRNIIIRDFAREIYNIKHYDIENDTIANLMIILKDQNDN 181 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 K Y R + + + + + + E ++L + Sbjct: 182 FKKRYDISKAEWIDSRWRLYGVREFSKIERDVIEKFHEVLDGRGIINLEPEYIKIVMLSS 241 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 N S L++ + R+ ++ + Sbjct: 242 KTLNFSKLIS-WIKALRREKLDYSEALFDLLSRIFFSFRLILLSFTVSFVSLALKKNIFI 300 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + + FS++ L LF + + + + Sbjct: 301 WSLLNSIAFAVVYVMSIMVFSFLADLGYLPIAVASSLPTILFIVINFIIYNL 352 >gi|254672902|emb|CBA07219.1| conserved hypothetical protein [Neisseria meningitidis alpha275] Length = 210 Score = 62.3 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 30/204 (14%), Positives = 68/204 (33%), Gaps = 2/204 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +IL + + + +L + +P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGKGSYGIWEMLGYTALKMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + +EL +I +G S L+ + + +I Sbjct: 61 AYELMPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLILSQFGFIFAIATVALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + A A + + + + I + + P++TL GI I D Sbjct: 121 VAPTLSQKAENIKAAAINGKISTGN--TGIWLKEKNSIINVREMLPDHTLLGIKIWARND 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILN 204 ++ + L Sbjct: 179 KNELAEAVEADSAVLNSDGSWQLK 202 >gi|255613816|ref|XP_002539536.1| Inner membrane protein yjgQ, putative [Ricinus communis] gi|223505146|gb|EEF22847.1| Inner membrane protein yjgQ, putative [Ricinus communis] Length = 283 Score = 62.3 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 37/284 (13%), Positives = 94/284 (33%), Gaps = 8/284 (2%) Query: 80 MNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLA 139 M ++EL+++ +G S T+ K +L + ++ ++ F+ II P +++ +A + Sbjct: 1 MASSSELIVMRTSGISLQTIAKMLLSIGLVFALVTFLIGEIIAPISEKMAQRIRIQATDS 60 Query: 140 LTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQ 199 + + L+ + + + + + I +A G + D Sbjct: 61 VVAQDFQSGLWIKDGSSFVNVATVMPDTSLVDIRIYDFDAQFRLRNISHADKGYFEDDHW 120 Query: 200 A--IILNDGEVHRKSPISKDISIMKFKSYTL-QTESANSSTIVLKANDQNLSFLLNPNPN 256 + KS + ++ FK ++L ++ ++ L Sbjct: 121 ILSNVTQTKMHTSKSAQNNSVTSQFFKQTKWESLIRPELLNVLLVLPEKMSAWNLYSFIQ 180 Query: 257 NPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISF 316 + + Y+ +L L ++ ++++ R IF + + Sbjct: 181 YLHQNGQRSTRYQVALWSKLVYPLACLVMVMLALPFGFL--QQRAGGISAKIFAGIFLGV 238 Query: 317 GVFWGFSYIIHKIEQN---PYYIPILYLFLFCISSIFLLMIKKK 357 +H N P I LF + + +L ++ Sbjct: 239 VYQIMNRVFVHLGVLNDWSPLVSAISPTLLFLAAGLGMLYYVER 282 >gi|325853208|ref|ZP_08171296.1| permease, YjgP/YjgQ family [Prevotella denticola CRIS 18C-A] gi|325484384|gb|EGC87307.1| permease, YjgP/YjgQ family [Prevotella denticola CRIS 18C-A] Length = 703 Score = 62.3 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 31/222 (13%), Positives = 86/222 (38%), Gaps = 2/222 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + +++I R G F + +F+ + + + ++ + S+++L + Y+ ++ Sbjct: 64 RKLDIFIARQFGMLFAGTFFISLFVLMMQFLWRYVDDLIGKGLSMDVLGQFFWYMSLMMV 123 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P P + + ++ ++EL I + G S + + ++ +++L++ F +N + Sbjct: 124 PQALPLAILLSSLISYGNLGESSELTAIKSAGISLVQSFRGLIVISVLIACGSFYFQNNV 183 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN--PNNTLQGIFIVDSR 179 P + I QL + + E +F+ + + + K + + + + Sbjct: 184 GPSAQKHIAQLLISMKQKSPELEIPEGIFYDGIPNTNLYVEKKDLKTGHLYNIMVYRMTD 243 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIM 221 + I A SG + + L + + M Sbjct: 244 SYEDQAIILADSGMLQSTAEKKHLVLNLWSGEWFENMRSQEM 285 >gi|149200566|ref|ZP_01877574.1| putative permease, YjgP/YjgQ family protein [Lentisphaera araneosa HTCC2155] gi|149136338|gb|EDM24783.1| putative permease, YjgP/YjgQ family protein [Lentisphaera araneosa HTCC2155] Length = 329 Score = 62.3 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 41/322 (12%), Positives = 90/322 (27%), Gaps = 25/322 (7%) Query: 55 YLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFL 114 L+P +L P + T V + M+ E+ + +G S ++ P + LA++ S L Sbjct: 1 MLLPKILAYAIPIASLVSVTLVFSRMSAENEITAMRASGISLWQIVNPAILLALVSSACL 60 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF 174 F P +T K + L+ ++L L K Sbjct: 61 FYLNMFAVPHLEATRKSMMKGELLSNPSTFLRGGTTIDLGKLSVEIGEKKEDGTLKDLRV 120 Query: 175 IVDSR-----------DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI--------- 214 I + + S +I+ I+ N+ E + Sbjct: 121 IEVDKATDIVSNQLLAQSGKIINTTENSFTIEFIDVIILDNNWEFLKNDKGENKSLSGVK 180 Query: 215 -----SKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYR 269 + + + + + L + + L + + N Sbjct: 181 VTRLPNANTTYTFYTNDELNSGNLRKRAKYLNIKEMIARLAVLKNKEQTKTVRREHTDLL 240 Query: 270 SEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI 329 +K L P+ F L+++ + + + I + + Sbjct: 241 YNLNKNLALSFSPLAFLLMALPFGLRSSRSETSIGLLISLIVMMTYYATILITGAFDKHT 300 Query: 330 EQNPYYIPILYLFLFCISSIFL 351 +P + L +F + + Sbjct: 301 AMHPEILVWLPNIIFQSLGLGM 322 >gi|317060239|ref|ZP_07924724.1| conserved hypothetical protein [Fusobacterium sp. D12] gi|313685915|gb|EFS22750.1| conserved hypothetical protein [Fusobacterium sp. D12] Length = 265 Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 37/259 (14%), Positives = 90/259 (34%), Gaps = 6/259 (2%) Query: 101 KPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIK 160 KP+L+L F+ + I P+ ++ LS+K L+E F ++ + Sbjct: 8 KPILYLGFASMFFILFLQESIIPRSYIKLQYLSSKIAYENPVFQLKERTFMNNLENYSLY 67 Query: 161 ISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISI 220 I K + +GI I ++ T + + D +I+L Sbjct: 68 IDKVGRDKHAKGILIFENDKKSTFPVVLVGHEAYWRD-SSIVLEKANFISFDEKGVRKLT 126 Query: 221 MKFKSYTLQTES--ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQ 278 F+ ++ ++ ++ V + +++ LL + Y+ E H++L Sbjct: 127 GSFEDKRVELQAYFSDLKIKVKETEMMSIATLLQEMKGKTKEEKLI---YKVEIHRKLAL 183 Query: 279 WLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 V+ ++ + + ++ I +++ + + + + Sbjct: 184 PFSSVMLSMLGVFLSIGHQRSGKKAGILVGILTIFFYISLLNIGIVLANVGKIPILLGVW 243 Query: 339 LYLFLFCISSIFLLMIKKK 357 L L + L ++KK+ Sbjct: 244 LPNLLLAALTYRLYLVKKR 262 >gi|239948137|ref|ZP_04699890.1| putative permease [Rickettsia endosymbiont of Ixodes scapularis] gi|239922413|gb|EER22437.1| putative permease [Rickettsia endosymbiont of Ixodes scapularis] Length = 233 Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 97/229 (42%), Gaps = 10/229 (4%) Query: 135 KAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSI 194 + S +EE F ++ D+ + I K + N + G+ I D+R+ + +A SG++ Sbjct: 7 FIKNNYISSMIEEKTFNKVTKDITVFIDKKSAGNIMNGVIIFDNRNADNPSVVFAGSGTL 66 Query: 195 DLDRQAIILNDGEVHRKSPI-SKDISIMKFKSYTLQTESANS-----STIVLKANDQNLS 248 ++ + I + R+ + +++ + F S ++ ++ N + +AN+ +S Sbjct: 67 NIYDNSPIFELNKGIRQEYDVNGNLTQLTFDSLMIKLQNDNPLVSQRTKHNKEANEYYIS 126 Query: 249 FLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPI 308 LL P + + +E H+R+ L+ + +++ + ++ + + Sbjct: 127 ELLAPPHDLAITKKI---KLIAEAHQRIIWPLYNFVLPFLALAVFLRYPYSKKTTFMPVL 183 Query: 309 FISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 F +L++ F + + +N +I Y L I L + +K Sbjct: 184 FSALTVLLVTSIHF-ILQNFASKNLDFIFACYSNLVIALMIGLYLFVRK 231 >gi|46446271|ref|YP_007636.1| hypothetical protein pc0637 [Candidatus Protochlamydia amoebophila UWE25] gi|46399912|emb|CAF23361.1| conserved hypothetical protein [Candidatus Protochlamydia amoebophila UWE25] Length = 383 Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 44/347 (12%), Positives = 94/347 (27%), Gaps = 25/347 (7%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y + + + I ++ L I ++ ++ +L + Y IP +LP Sbjct: 4 ILWRYSINHFLKIVFACVFAFISILLTMR-LDEIANFAALGAPISYILLFAFYQIPYILP 62 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + P + + + ++ EL + G + L+ P+L A L+IF F + + Sbjct: 63 IALPLSCLIASLIFVQRLSNTHELTALRACGFALKDLLAPILLTAAFLTIFNFWIVSEVA 122 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + L ++ + L RL + + Sbjct: 123 TQTHLQTNILKSELRSINPLLLLNNKHLMRLKGLYFDSLGPSRVGEMATDAVFAIPSQHH 182 Query: 183 THKIYYAQSG------SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + ++ + I MK + ++ S Sbjct: 183 QRINLFIAKQLKASSSIFTAQGATLLTTTSLNQENTFDDLLIENMKKSTTHVEDFSQILQ 242 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYR------------------PELLETYRSEFHKRLTQ 278 V N+ L L + SE KR + Sbjct: 243 KKVWTVNNDYLKLPLLLIRAQEQKQALRQAKLENKKPVIVKDLKGQFHKSLSEIAKRSSI 302 Query: 279 WLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYI 325 + F L+ + R+ K + + I + F+ + Sbjct: 303 AFAVISFTLMGTAFGMNISRQRKHKNLLIVIILTTFYLTTFFLAKGL 349 >gi|148651871|ref|YP_001278964.1| permease YjgP/YjgQ family protein [Psychrobacter sp. PRwf-1] gi|148570955|gb|ABQ93014.1| permease YjgP/YjgQ family protein [Psychrobacter sp. PRwf-1] Length = 494 Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 32/187 (17%), Positives = 72/187 (38%), Gaps = 1/187 (0%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + + + F+V + ++++ + + + +L I GY +P L Sbjct: 24 ILRRYMTRQVASTTALVLGFLVVLLLGGRMIRYFGIAAEGRLDVGLLFSIIGYNLPYFLE 83 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V P F + V + + E+ +++ +G SR L + ++ L ++L + + Sbjct: 84 LVLPLSFFIGLMLVFGRLYVDHEMAVLNGSGISRGRLARLIIPLILVLFVLEAGLSLYGK 143 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + + + L+ F + F D D ++ + N N T I+ Sbjct: 144 PWGVKNSESIWQQQSLSSAFDLIRPQTFINSD-DYHLYVGSMNDNKTELQDVILIQTAKD 202 Query: 183 THKIYYA 189 K Sbjct: 203 AAKSVKP 209 Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 19/173 (10%), Positives = 55/173 (31%), Gaps = 13/173 (7%) Query: 191 SGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK-ANDQNLSF 249 GS + + + L G + S S + F+ Y + + + + Q++ Sbjct: 288 KGSEESGKTQLDLFQGRRYEVGADSLVYSQIGFERYRISINQPPADVLTEENVTTQSVPA 347 Query: 250 LLNPNPNNPNYRP---------ELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 L + + + ++E RL ++ ++++ A + Sbjct: 348 LWKAATGQKVATKADGSTEPEPQQILSAQAELGYRLALPWLIILAPMLAVPLA---QVKP 404 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 ++ + + ++ I + + I + + L L + L + Sbjct: 405 RQGRWLRLLPAILIFTSCVLVIISLKNAITKGTLSVLSYPLVLIGFIVLALYL 457 >gi|55980367|ref|YP_143664.1| hypothetical protein TTHA0398 [Thermus thermophilus HB8] gi|55771780|dbj|BAD70221.1| conserved hypothetical protein [Thermus thermophilus HB8] Length = 336 Score = 61.9 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 44/353 (12%), Positives = 106/353 (30%), Gaps = 20/353 (5%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 Y+LR + +L+ + + ++ S + + Y +P L + Sbjct: 2 LGRYVLREVLVPYLVGVFLFAALLTFDLLSSLSGVLLSRGVGAREVGLLVLYRLPWTLSL 61 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P L + R +EL G + L++P++ LA+ +S+ ++ + P Sbjct: 62 ALPLGLVFAVLVGLAGLIRRSELKAAYAAGVPPLALLRPLVLLALAVSLLNLLNLAELRP 121 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + L + + L + ++ + Sbjct: 122 RSQEAYDGLLGRILYGEGGASGVLRRQVYAPPGLGVYFAEEVYPEPEGNRLRGVRVVDER 181 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 ++Y A+ G D + + E P + S + Sbjct: 182 GRVYSAEEGLWDEEGWRLKGYVVEGEEVRPFEGVLPFPARFRPKESLGSRD-------PY 234 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 D L R ++ R FH+RL L ++ + A AL + Sbjct: 235 DSTPLEELWA-------RAQVEPEARFAFHRRLADALGGLV------LGAAAAALGLSLR 281 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + F+ + + ++ + ++ + + YL ++ + + Sbjct: 282 EAAWAFLGVVLLIFGYYVLWTLAAQLARYDVSPLLAYLPDLFYGALAGALAWR 334 >gi|46198338|ref|YP_004005.1| hypothetical protein TTC0030 [Thermus thermophilus HB27] gi|46195960|gb|AAS80378.1| hypothetical membrane spanning protein [Thermus thermophilus HB27] Length = 336 Score = 61.9 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 44/353 (12%), Positives = 107/353 (30%), Gaps = 20/353 (5%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 Y+LR + +L+ + + ++ S + + Y +P L + Sbjct: 2 LGRYVLREVLVPYLVGVFLFAALLTFDLLSSLSGVLLSRGVGAREVGLLVLYRLPWTLSL 61 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P L + R +EL G + L++P++ LA+ +S+ ++ + P Sbjct: 62 ALPLGLVFAVLVGLAGLIRRSELKAAYAAGVPPLALLRPLVLLALAVSLLNLLNLAELRP 121 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + +L + + L + ++ + Sbjct: 122 RSQEAYDRLLGRILYGEGGASGVLRRQVYAPPGLGVYFAEEVYPEPEGNRLRGVRVVDER 181 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 ++Y A+ G D + + E P + S + Sbjct: 182 GRVYSAEEGLWDEEGWRLKGYVVEGEEVRPFEGVLPFPARFRPKESLGSRD-------PY 234 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 D L R ++ R FH+RL L ++ + A AL + Sbjct: 235 DSTPLEELWA-------RAQVEPEARFAFHRRLADALGGLV------LGAAAAALGLSLR 281 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + F+ + + ++ + ++ + + YL ++ + + Sbjct: 282 EAAWAFLGVVLLIFGYYVLWTLAAQLARYDVSPLLAYLPDLFYGALAGALAWR 334 >gi|296274436|ref|YP_003657067.1| permease YjgP/YjgQ family protein [Arcobacter nitrofigilis DSM 7299] gi|296098610|gb|ADG94560.1| permease YjgP/YjgQ family protein [Arcobacter nitrofigilis DSM 7299] Length = 339 Score = 61.6 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 59/356 (16%), Positives = 127/356 (35%), Gaps = 18/356 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y+L +F L + FI +I +++ ++ S T ++ L + Y +P ++ Sbjct: 2 KLKQYLLSQFSNTFFPIFLVLFFITSIIFLVRIASITSVITLNIFELGTLYAYNLPNIIF 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P F + L+ ++ EL+++ + G + ++K L + L+S+ L I + Sbjct: 62 YTMPISFFVAMVITLSKLSSEYELIVVTSFGLNPSNILKVFLPITFLISLSLLILSIGLI 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 PK + +Q+ + F+ + D L K + +F +++ T Sbjct: 122 PKTKYLSQQMINQKTKEANFNIKASEFGQKFGDWLIYISKKDDKLYEEVKLFKTENKGTD 181 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 I + D + IL DG+ I+ + +K + + S Sbjct: 182 QFIIAKNARLNNDAGNLSFILKDGKAFYFEQDK--INQIDYKVMHINDTLSESQITPFTN 239 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + +N + + + + ++ IF ISI R Sbjct: 240 AYEYWKERINSDGDIA----------------KFSFYVLTSIFPFISIYLVVAFGYFNPR 283 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + + IS +++ S + K I+ + I+ L +KK Y Sbjct: 284 YEKNRSVAYAVISVVMYYLISDPLTKSIGLLSIPSIIVFWTIMSYFIYKLTVKKVY 339 >gi|203284704|ref|YP_002222444.1| hypothetical protein BDU_816 [Borrelia duttonii Ly] gi|203288236|ref|YP_002223251.1| hypothetical protein BRE_819 [Borrelia recurrentis A1] gi|201084147|gb|ACH93738.1| uncharacterized conserved protein [Borrelia duttonii Ly] gi|201085456|gb|ACH95030.1| hypothetical protein BRE_819 [Borrelia recurrentis A1] Length = 402 Score = 61.6 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 38/352 (10%), Positives = 103/352 (29%), Gaps = 1/352 (0%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + + I +FL V + + +L + S+N ++ I +P Sbjct: 49 KVDKIFVNNILLTFLFMNFLFVILIVLFDLLTNLLNYLEHNLSINDIIYIYYLYLPKCFS 108 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 F +N+L +++ E++ + + G S +++ ++ L++ +S+ LF +N + Sbjct: 109 DGVALSFLFAVSNLLGNLSMRNEIIGLFSCGISIARILRSIIMLSVFVSVILFFFDNYLV 168 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + + + + IK + + I+ +D Sbjct: 169 VDTVAERDAFLKNNIGNQGANDRNIIIKDFAREIYNIKRFDVETHIITNLMIILKDQDDN 228 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 K Y + + + + + + + E I+L + Sbjct: 229 FKKRYDISKAEWVDSKWMLYGVREFYKVELDVIEKFYEVLDGENIVNLEPGYIKIIMLSS 288 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 N S L+ + + R+ ++ + Sbjct: 289 KTLNFSKLV-TWIGDLIKENLNYSDALFDLLNRIFFSFRLILLSFTVSFVSLFLKKNIFI 347 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 + + F+++ + + L LF I + + + Sbjct: 348 WSLLNSIAFAVVYVISIMVFNFLADLGYLSIFIASSLPTILFIIINFVIYNL 399 >gi|317503835|ref|ZP_07961845.1| conserved hypothetical protein [Prevotella salivae DSM 15606] gi|315665031|gb|EFV04688.1| conserved hypothetical protein [Prevotella salivae DSM 15606] Length = 632 Score = 61.6 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 33/209 (15%), Positives = 79/209 (37%), Gaps = 2/209 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +++I + G F+ + F+ + + + I+ + S+ ++ K Y+ ++ Sbjct: 5 KKLDIFIAKQFGMLFVGTFFICQFVLMMQFLWRYIDELIGKGLSMEVMAKFFWYMGLMLV 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P P + + ++ ++EL I G S + + ++ + I +S F+ +N I Sbjct: 65 PQALPLAILLSSLITFGNLGESSELTAIKAAGISLMQSFRSLIVITIFISGLSFVFQNNI 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN--PNNTLQGIFIVDSR 179 P+ + I QL Q + E +F+ + + + + + + Sbjct: 125 GPEANNKIAQLMISMQQKSPELEIPEGVFYDGIPNSNLYVQHKDLKTGKLYGVMIYRMTG 184 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEV 208 + I A SG + + L Sbjct: 185 SYEDQAIILADSGMLQSTAEKKHLVLTLW 213 >gi|307566095|ref|ZP_07628553.1| putative membrane protein [Prevotella amnii CRIS 21A-A] gi|307345283|gb|EFN90662.1| putative membrane protein [Prevotella amnii CRIS 21A-A] Length = 633 Score = 61.6 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 86/222 (38%), Gaps = 2/222 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +++I + G F+ + +F+ + + + ++ + ++++L + GY+ ++ Sbjct: 5 KKLDIFIAKQFGLLFVGTFFISLFVLMMQFLWRFVDDLIGKGLTIDVLAQFFGYMALMMV 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P P + + ++ ++EL I G S + ++ + IL+++ F +N I Sbjct: 65 PQALPLAVLLSSLMTYGNLGESSELTAIKAAGISLFQSFRGLIGITILITLLSFYFQNNI 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN--PNNTLQGIFIVDSR 179 P + + QL + + E +F+ + + K N + + + Sbjct: 125 APVAQKHLYQLIISMKQKSPELEIPEGVFYSGIPQTNLYVEKKNLKTGHLYNIMVYRMTD 184 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIM 221 + I A SG + + L + + + + Sbjct: 185 SYEDQAIILADSGMLQSTAEKKHLVLNLWNGEWFENMRDQEI 226 >gi|255349244|ref|ZP_05381251.1| putative membrane transport protein [Chlamydia trachomatis 70] gi|255503781|ref|ZP_05382171.1| putative membrane transport protein [Chlamydia trachomatis 70s] gi|255507462|ref|ZP_05383101.1| putative membrane transport protein [Chlamydia trachomatis D(s)2923] gi|289525885|emb|CBJ15367.1| putative membrane transport protein [Chlamydia trachomatis Sweden2] gi|296435471|gb|ADH17649.1| putative membrane transport protein [Chlamydia trachomatis E/150] gi|296439188|gb|ADH21341.1| putative membrane transport protein [Chlamydia trachomatis E/11023] Length = 354 Score = 61.6 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 41/348 (11%), Positives = 113/348 (32%), Gaps = 9/348 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M ++ ++ + L ++ I+ + + + ++ ++ + K++ Y IP + Sbjct: 1 MPILWKVLIFRYLKTTVFCTLSLICISIISSLQEIVSYIA-KDVPYATVFKVTAYQIPYL 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP + P + + ++ N ++ + +G S+ +I PVL + +L F F + + Sbjct: 60 LPFILPVSCFISAFTLFRKLSDNNQITFLKASGASQGMIIFPVLIASGVLCCFNFYTCSE 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKI---SKYNPNNTLQGIFIVD 177 + CR + A + L+ D N + + Sbjct: 120 LASICRFQTGKEIANIAMTSPALLLQTLQKKENDRIFIAIDHCGKSKFDNVIIALKHNQE 179 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + + + +++ + + + ++ ++T Sbjct: 180 ISNIGFIETIIPDVNKDSVQAKNVLVISKIPLFSEARTSNPNEFYLETLDEFLIPKITAT 239 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + P + + +E +R+ L + + Sbjct: 240 LFAGKSYMKTRTDYLPWKQLI----QDARLHLAEILRRIAIGLLCSTMTFSGLALGTYKP 295 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC 345 R+ I+ +F L++ F + G + I + P L +L Sbjct: 296 RFRKPVLIYALFPILNLIFLI-VGKNTIHPISAVMLFLFPQLLSWLIF 342 >gi|307721207|ref|YP_003892347.1| permease YjgP/YjgQ family protein [Sulfurimonas autotrophica DSM 16294] gi|306979300|gb|ADN09335.1| permease YjgP/YjgQ family protein [Sulfurimonas autotrophica DSM 16294] Length = 340 Score = 61.6 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 55/341 (16%), Positives = 120/341 (35%), Gaps = 14/341 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + YIL F+ L + IA VI +++ + S+ + K+ +++P + Sbjct: 1 MQRLQKYILNNFSALFMSIFLPLFVIASVIFLIKLSTYTAVIQLSIWEMGKLYLFVLPEI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P F + T L ++ + E+++I G ++K A +LS+ L + Sbjct: 61 LFYTLPITFFIAATLSLFKLSNDNEIIVIFALGIEPGFIVKTFFKPAFILSLLLAFDFLV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P K + + F+ D L + I + + + T +F+ + + Sbjct: 121 VSPHTTVLSKNFLSYKKSEAKFNLAASEFGNSFGDWL-LYIGEKDKDGTFSKVFLFNKKQ 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + A+ ++ D + L + S + S + FK+ + T Sbjct: 180 ENEEILIAAKRATVINDAGILRLKLMDGEGYSYSTNKFSQVNFKAMLINDTLKADLTTYK 239 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + LS E + K LFP+I + + + Sbjct: 240 QPLQYWLS-------------KENAGRKKHVLIKDTLLSLFPMITLFLIASIGIVQVRHQ 286 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL 341 + K +F+++ + +G+ G + + L Sbjct: 287 KSKVYLYLFLTIVLYYGMTIGLEKMFQYYTILVVTLSWLIA 327 >gi|312129693|ref|YP_003997033.1| permease yjgp/yjgq family protein [Leadbetterella byssophila DSM 17132] gi|311906239|gb|ADQ16680.1| permease YjgP/YjgQ family protein [Leadbetterella byssophila DSM 17132] Length = 453 Score = 61.6 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 48/298 (16%), Positives = 102/298 (34%), Gaps = 17/298 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + ++ F+++ +VFI + ++ + + K+ Y Sbjct: 1 MKKIDKLFVKSYIGPFVLTTAIVVFIFLMRFLMIYFPEFIGKNLDMMVFAKLFFYFTMMT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +PM P + T ++ +EL + + G LI P + L+I ++IF N Sbjct: 61 IPMSLPLATLLATLMCFGNLGEKSELTAMKSAGIPITRLIVPTMILSIFVAIFSIGYNNT 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P L + ++E +F+ IK+ K + IV + Sbjct: 121 VNPWANLKGWSLLYDIKTTKPALNIQEGIFYNQIPGYRIKVEKKVGDGQSLKNVIVYDHN 180 Query: 181 --TQTHKIYYAQSGSID----LDRQAIILNDGEVH----------RKSPISKDISIMKFK 224 + I A SG + + L +G + + + S + + F Sbjct: 181 TGSGNKNITVADSGRMYTINKESQLVFELYNGVNYSEGSSYNNMAQMTRYSFQKNKIVFL 240 Query: 225 SYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFP 282 + + + +++ L N ++ N + + +KRL + FP Sbjct: 241 LSSFGLKRSKEEDFTYHEYMKSIPEL-NEKIDSLNKQIRDKSGQQIIAYKRLDLYAFP 297 Score = 41.1 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 8/88 (9%), Positives = 28/88 (31%), Gaps = 3/88 (3%) Query: 270 SEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI 329 E ++T + LI +++++ P+ IS++ + Sbjct: 365 LERWNKVTTGFSCLAMFLIGASL---GSIIKRGGFGMPVLISIAFFILYYLLQQMGNKYA 421 Query: 330 EQNPYYIPILYLFLFCISSIFLLMIKKK 357 ++ + F + ++ ++ Sbjct: 422 KEGLISAVVGAWMPFSVLITIGALLMRR 449 >gi|312148449|gb|ADQ31108.1| putative permease, YjgP/YjgQ family [Borrelia burgdorferi JD1] Length = 355 Score = 61.6 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 42/355 (11%), Positives = 118/355 (33%), Gaps = 1/355 (0%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + ++ I +FL L + + + + + L +L I +P Sbjct: 2 KIDKLFIKSIILTFLSMNLLFMILIMLGDLFVNLLNYLEKNIGLKDILYIYYLYLPKAFS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 F +N++ +++ E++ + + G ++KP++ ++I +S+ LF +N + Sbjct: 62 DGVALSFLFAISNLIGNLSMRNEIIGLFSCGVPLTRILKPIILISIFISVVLFFFDNYLV 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + L + + + IK + N + I+ + Sbjct: 122 IDTIARRDVLVKNSIGDSRSGDKTIIIRDFAREIYNIKSYDIDENTFANLMIIIKDNKDE 181 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 Y ++ + V I ++ + + ++ T++L + Sbjct: 182 FQTRYDINKAEWKDNKWRLYGIREFVKVGKKIKENAYDVLDGTGIIKLAPDYIRTVMLSS 241 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 N + L+N R + + ++ + ++ + +A + + Sbjct: 242 KALNFTKLINWISFLKAERLNYSDAFFDLLNRIFFSFRLILLSFTVGFIALALKKNIFIL 301 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 ++ I ++ + F+++ + Y F I + F+ I +K Sbjct: 302 SLLNSIAFAVVYVISI-VIFNFLADLGYLHIYIASSFTTIFFLIINFFVYRIVRK 355 >gi|11465471|ref|NP_045138.1| hypothetical protein CycaCp121 [Cyanidium caldarium] gi|6466374|gb|AAF12956.1|AF022186_79 unknown [Cyanidium caldarium] Length = 397 Score = 61.6 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 57/372 (15%), Positives = 114/372 (30%), Gaps = 17/372 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y+ + + FL + VFI + + ++ SS L I L+I +P Sbjct: 23 TILDSYLFKSLVLPFLFCWVSFVFIELSVGCVNQLMSDLSSGLPLEISLQILLLYLPLYA 82 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P N + +LL + T S L + VL + + II Sbjct: 83 YFALPITSFFSGLISFRIKNYSNQLLGVYITSISFSRLFRSVLIFTSAICGTTWCISEII 142 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P ++++ L KA L S E + + K ++I Sbjct: 143 IPVSSNSLQVLHRKASLCARNSICSETSSGIFTNYYNSQSKKAPLKELKGVLYIKHFNHL 202 Query: 182 QTHKIYY-------------AQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTL 228 +++ Y A S D + + + + + + L Sbjct: 203 NAYQLIYLDFNNENLKQLFLADSAKFDHFSRNWLFENMHIFSFDYDKELFVDSFNINMNL 262 Query: 229 QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 S + N S + Y+ S+ ++L+ L+ F I Sbjct: 263 CNLSILDLKLNAVINKSQFSPFWMNAASIKMYKELSHLKTYSKSWRKLSLRLYQKYFTPI 322 Query: 289 SIVAA----DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 S + R + + FI + I+F + + I ++ Sbjct: 323 SSIFLYSTGALMGSFRYKTQYLSFFIGILIAFQFYLSTFVTESAVILGIIPIYFSFIVPT 382 Query: 345 CISSIFLLMIKK 356 ++ I LL++++ Sbjct: 383 SLTVILLLVLRR 394 >gi|15605574|ref|NP_220360.1| hypothetical protein CT839 [Chlamydia trachomatis D/UW-3/CX] gi|76789584|ref|YP_328670.1| permease [Chlamydia trachomatis A/HAR-13] gi|237803271|ref|YP_002888465.1| putative membrane transport protein [Chlamydia trachomatis B/Jali20/OT] gi|237805192|ref|YP_002889346.1| putative membrane transport protein [Chlamydia trachomatis B/TZ1A828/OT] gi|255311680|ref|ZP_05354250.1| putative membrane transport protein [Chlamydia trachomatis 6276] gi|255317981|ref|ZP_05359227.1| putative membrane transport protein [Chlamydia trachomatis 6276s] gi|3329310|gb|AAC68436.1| hypothetical protein CT_839 [Chlamydia trachomatis D/UW-3/CX] gi|76168114|gb|AAX51122.1| predicted permease [Chlamydia trachomatis A/HAR-13] gi|231273492|emb|CAX10408.1| putative membrane transport protein [Chlamydia trachomatis B/TZ1A828/OT] gi|231274505|emb|CAX11301.1| putative membrane transport protein [Chlamydia trachomatis B/Jali20/OT] gi|296436395|gb|ADH18569.1| putative membrane transport protein [Chlamydia trachomatis G/9768] gi|296437326|gb|ADH19496.1| putative membrane transport protein [Chlamydia trachomatis G/11222] gi|296438254|gb|ADH20415.1| putative membrane transport protein [Chlamydia trachomatis G/11074] gi|297140755|gb|ADH97513.1| putative membrane transport protein [Chlamydia trachomatis G/9301] gi|297748967|gb|ADI51513.1| Predicted permease [Chlamydia trachomatis D-EC] gi|297749847|gb|ADI52525.1| Predicted permease [Chlamydia trachomatis D-LC] Length = 354 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 41/348 (11%), Positives = 113/348 (32%), Gaps = 9/348 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M ++ ++ + L ++ I+ + + + ++ ++ + K++ Y IP + Sbjct: 1 MPILWKVLIFRYLKTTVFCTLSLICISIISSLQEIVSYIA-KDVPYATVFKVTAYQIPYL 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP + P + + ++ N ++ + +G S+ +I PVL + +L F F + + Sbjct: 60 LPFILPASCFISAFTLFRKLSDNNQITFLKASGASQGMIIFPVLIASGVLCCFNFYTCSE 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKI---SKYNPNNTLQGIFIVD 177 + CR + A + L+ D N + + Sbjct: 120 LASICRFQTGKEIANIAMTSPALLLQTLQKKENDRIFIAIDHCGKSKFDNVVIALKHNQE 179 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + + + +++ + + + ++ ++T Sbjct: 180 ISNIGFIETIIPDVNKDSVQAKNVLVISKIPLFSEARTSNPNEFYLETLDEFLIPKITAT 239 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + P + + +E +R+ L + + Sbjct: 240 LFAGKSYMKTRTDYLPWKQLI----QDARLHLAEILRRIAIGLLCSTMTFSGLALGTYKP 295 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC 345 R+ I+ +F L++ F + G + I + P L +L Sbjct: 296 RFRKPVLIYALFPILNLIFLI-VGKNTIHPISAVMLFLFPQLLSWLIF 342 >gi|262277385|ref|ZP_06055178.1| putative permease, YjgP/YjgQ family [alpha proteobacterium HIMB114] gi|262224488|gb|EEY74947.1| putative permease, YjgP/YjgQ family [alpha proteobacterium HIMB114] Length = 365 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 45/357 (12%), Positives = 104/357 (29%), Gaps = 4/357 (1%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLI---P 58 ++ Y+++ S ++ + + + +Q I S N LL++ P Sbjct: 7 RTLIKYLIKEFSFSLMIFTVIFSSLIILTTFIQEITFFQEKEVSDNFLLRMLLLTFIKSP 66 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 T++ + F F +N E++ I +G S + + L I + I Sbjct: 67 TLIINSSSFIFLFAGIFFYVKFMKNNEIVPISLSGFSMNFITLVPGIFSFFLGIVIIIIF 126 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 + I + + + + + + I + F Sbjct: 127 SPISSELSKYYESIKKNYSKNDNLIVMSATGIWIKEKK-NDNIYIIRADKLSGNDFAKLK 185 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + I+ D I+ N+ ++ + +S +I + + + Sbjct: 186 NISIYTFSMNKFKERINGDNGIIVKNNLKITPANLVSDVRNISLNSYTYISKINLENIKN 245 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 D + + N+ E +FHK L+ ++S K Sbjct: 246 YFVNADTFSIWSVKNALNDVRKMGYFGEEIIIKFHKYLSLPFLLFAMIVLSTFFTIKMNF 305 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + I I F+ S + K + P + + + ++I Sbjct: 306 TFNNFIYAFLGILTGIIVYFFYDLSIAVGKSGKLPLILSVWMPVILINVFSIYILIN 362 >gi|268679754|ref|YP_003304185.1| permease YjgP/YjgQ family protein [Sulfurospirillum deleyianum DSM 6946] gi|268617785|gb|ACZ12150.1| permease YjgP/YjgQ family protein [Sulfurospirillum deleyianum DSM 6946] Length = 341 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 53/360 (14%), Positives = 113/360 (31%), Gaps = 22/360 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+L+ G F + FI ++ ++ L + + L + YL+P Sbjct: 1 MNRTSRYLLKHFGALFSSLFFILFFITSIVFFIKITALTAIIQMNFLELGTLYIYLLPRT 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P F + L ++++ E +++ G + + + L LA LS+ L ++ + Sbjct: 61 LVYTLPITFFIALCITLFNLSKENETIVLFTLGYNPQKIARLFLLLATGLSLLLILNIFV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + F+ + L + + Sbjct: 121 LIPISKELNSNFIDYKKAEAKFNIKASEFGQKFSQWLVYIEKSDDQKHFSGVTLYQVPTP 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + ++ A + I+ + LN E +I + F+ + ++ + Sbjct: 181 NEDERLILANNALIENTDGKLRLNLEEGKIFEFKKNEIEQINFERMHINSQPKAGIGTIQ 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + +N E L LFP+ LI++ Sbjct: 241 SVKEYWNGVFVNSKRAY-------------ELAFFLLIALFPLASTLIALSIGIVTYRYN 287 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + +F ++ I F FS ++ L +F ++ I KY K Sbjct: 288 KGGIYIAMFATIFIYFAAATLFST---------WHPQSAPLVVFILTFFIAYRIYLKYIK 338 >gi|108760212|ref|YP_631129.1| hypothetical protein MXAN_2918 [Myxococcus xanthus DK 1622] gi|108464092|gb|ABF89277.1| putative membrane protein [Myxococcus xanthus DK 1622] Length = 371 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 39/362 (10%), Positives = 102/362 (28%), Gaps = 12/362 (3%) Query: 1 MK-SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPT 59 M+ + +Y+LR R L +V + V+ + R L + + ++ Y Sbjct: 1 MRGTLFIYVLRTYLRFALGILAGLVLVFVVVDFVDRAKLYTGPGW-VWDAAELYFYKAMM 59 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + + P + ++++ + E+ I L P+L + + + L + Sbjct: 60 SVQQLGPAALLLAAGTTVSALRKQGEVTAIRALTFGPSALYLPILVASFVACVGLVAFDE 119 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEE-NLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 + + +++ + + D + + Q + + Sbjct: 120 RVATYSGRRVDEITTQRFNKWGDWRFYYTPKQWFRRGDNIFFLRGGSAQEGFQDVSVFTV 179 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKS-PISKDISIMKFKSYTLQTESANSST 237 ++ + SG ++ L D + + Y L Sbjct: 180 TESFDLQRRLDASGMFPVEGMRWRLTDVVERTFDGEGKTSVRQLPEAEYDLGVAVTAFRI 239 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + S L + + + H R + L+ + A Sbjct: 240 RPGRPEQMRASELREQIVARRDV-GLATKQFELALHNRFAYPMAAFPAALLGVGLAL--R 296 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF----LFCISSIFLLM 353 R+ I L + + WG + + P + + L + + + + Sbjct: 297 ANRRGHLTAAIIEGLLTAVAM-WGLMMVCRTLVLTERLSPGVAAWTPTVLLGLIAGAVWL 355 Query: 354 IK 355 + Sbjct: 356 QR 357 >gi|28198043|ref|NP_778357.1| hypothetical protein PD0107 [Xylella fastidiosa Temecula1] gi|182680670|ref|YP_001828830.1| permease YjgP/YjgQ family protein [Xylella fastidiosa M23] gi|28056103|gb|AAO28006.1| conserved hypothetical protein [Xylella fastidiosa Temecula1] gi|182630780|gb|ACB91556.1| permease YjgP/YjgQ family protein [Xylella fastidiosa M23] gi|307579131|gb|ADN63100.1| permease YjgP/YjgQ family protein [Xylella fastidiosa subsp. fastidiosa GB514] Length = 361 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 36/256 (14%), Positives = 93/256 (36%), Gaps = 5/256 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L +SF+ + + ++ + ++ + ++ +LL G + Sbjct: 1 MPKLDRYLLSDFTQSFIATLIVLMLVGVGGVLVDILGSIADGHFPAKLLLSQLGLRFISY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP++ P + L + R++E+ +I + G ++ +L L + + + + + Sbjct: 61 LPLLLPLALMLGLLMSLGRLYRDSEMAVITSIGVGPGRMLPSILGLVLPVVVLIGVCSLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P T L +A ++ + LE F + D + +S + + T + S+ Sbjct: 121 LAPWANRTANDLLEQANRSIIMAGLEAGTFTPMPDGGVVYLSSLSSDGTKLNAVFMQSQK 180 Query: 181 TQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISK--DISIMKFKSYTLQTESANS 235 + A+ G + + + L DG+ + ++ F + Sbjct: 181 DDRIAVVTAKRGEMYVQGDKGRYLRLEDGQRVDGPADGAALNYRVLTFARNDALLPELSV 240 Query: 236 STIVLKANDQNLSFLL 251 + L+ Sbjct: 241 VYDSNHPDILPTFNLI 256 >gi|260910242|ref|ZP_05916919.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str. F0295] gi|260635746|gb|EEX53759.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str. F0295] Length = 630 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 36/261 (13%), Positives = 91/261 (34%), Gaps = 7/261 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +++I + G FL + +F+ + + + ++ + ++ +L + ++ ++ Sbjct: 5 KKLDIFICKQFGMLFLGTFFICLFVLMMQFLWRYVDELVGKGLTMEVLAQFFWWMALMMV 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P P + + +++ ++EL I + G S ++ + L+S+ F+ +N I Sbjct: 65 PQALPLAILLSSLITFGNLSESSELTAIKSAGISLTRTFSSLVVVCSLISVTSFVFQNNI 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN--NTLQGIFIVDSR 179 P + QL + + E +F+ + I + K + + S Sbjct: 125 GPYSTIKLSQLLISMKQKSPELGIPEGVFYDGIPNSNIYVQKKDNQTGKFYGIMIYRMSN 184 Query: 180 DTQTHKIYYAQSGSIDLDRQAII----LNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + +I A SG + + L +GE + E Sbjct: 185 SYEDSEIILADSGMLQTTAERKHLLLTLWNGEWFSNQSQEVGKNAAAPFRRETFLEKKTL 244 Query: 236 STIVLKANDQNLSFLLNPNPN 256 + + L + + Sbjct: 245 IDFNGD-FNMTDAELFSGDAR 264 Score = 40.0 bits (91), Expect = 0.57, Method: Composition-based stats. Identities = 12/93 (12%), Positives = 37/93 (39%), Gaps = 6/93 (6%) Query: 262 PELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWG 321 ++ ++ E +K+ L +IF I A ++R+ P+ +S+ + + Sbjct: 363 NRMIRQHKIEMYKKFLVSLSCLIFFFIG---APLGTIIRKGGLGIPVIVSVLVFIVYYIL 419 Query: 322 ---FSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + + + ++ +L + ++F+ Sbjct: 420 DNTGYQMARRGIWDVWFGELLATMVLTPLAVFV 452 >gi|15595153|ref|NP_212942.1| hypothetical protein BB0808 [Borrelia burgdorferi B31] gi|195941982|ref|ZP_03087364.1| hypothetical protein Bbur8_03794 [Borrelia burgdorferi 80a] gi|216264628|ref|ZP_03436620.1| putative permease, YjgP/YjgQ family protein [Borrelia burgdorferi 156a] gi|218249833|ref|YP_002375306.1| putative permease, YjgP/YjgQ family protein [Borrelia burgdorferi ZS7] gi|221217616|ref|ZP_03589085.1| permease, YjgP/YjgQ family [Borrelia burgdorferi 72a] gi|223889339|ref|ZP_03623926.1| permease, YjgP/YjgQ family [Borrelia burgdorferi 64b] gi|224533064|ref|ZP_03673669.1| permease, YjgP/YjgQ family [Borrelia burgdorferi WI91-23] gi|224533456|ref|ZP_03674049.1| permease, YjgP/YjgQ family [Borrelia burgdorferi CA-11.2a] gi|225549381|ref|ZP_03770353.1| permease, YjgP/YjgQ family [Borrelia burgdorferi 94a] gi|225550246|ref|ZP_03771205.1| permease, YjgP/YjgQ family [Borrelia burgdorferi 118a] gi|226321273|ref|ZP_03796801.1| permease, YjgP/YjgQ family [Borrelia burgdorferi Bol26] gi|2688753|gb|AAC67159.1| predicted coding region BB0808 [Borrelia burgdorferi B31] gi|215981101|gb|EEC21908.1| putative permease, YjgP/YjgQ family protein [Borrelia burgdorferi 156a] gi|218165021|gb|ACK75082.1| putative permease, YjgP/YjgQ family protein [Borrelia burgdorferi ZS7] gi|221192562|gb|EEE18780.1| permease, YjgP/YjgQ family [Borrelia burgdorferi 72a] gi|223885260|gb|EEF56363.1| permease, YjgP/YjgQ family [Borrelia burgdorferi 64b] gi|224512000|gb|EEF82396.1| permease, YjgP/YjgQ family [Borrelia burgdorferi WI91-23] gi|224513418|gb|EEF83776.1| permease, YjgP/YjgQ family [Borrelia burgdorferi CA-11.2a] gi|225369114|gb|EEG98568.1| permease, YjgP/YjgQ family [Borrelia burgdorferi 118a] gi|225370009|gb|EEG99450.1| permease, YjgP/YjgQ family [Borrelia burgdorferi 94a] gi|226233305|gb|EEH32056.1| permease, YjgP/YjgQ family [Borrelia burgdorferi Bol26] gi|312149740|gb|ADQ29811.1| putative permease, YjgP/YjgQ family [Borrelia burgdorferi N40] Length = 355 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 42/355 (11%), Positives = 118/355 (33%), Gaps = 1/355 (0%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + ++ I +FL L + + + + + L +L I +P Sbjct: 2 KIDKLFIKSIILTFLSMNLLFMILIMLGDLFVNLLNYLEKNIGLKDILYIYYLYLPKAFS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 F +N++ +++ E++ + + G ++KP++ ++I +S+ LF +N + Sbjct: 62 DGVALSFLFAISNLIGNLSMRNEIIGLFSCGVPLTRILKPIILISIFISVVLFFFDNYLV 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + L + + + IK + N + I+ + Sbjct: 122 IDTIARRDVLIKNSIGDSRSGDKTIIIRDFAREIYNIKSYDIDENTFANLMIIIKDNKDE 181 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 Y ++ + V I ++ + + ++ T++L + Sbjct: 182 FQTRYDINKAEWKDNKWRLYGIREFVKVGKKIKENAYDVLDGTGIIKLAPDYIRTVMLSS 241 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 N + L+N R + + ++ + ++ + +A + + Sbjct: 242 KALNFTKLINWISFLKAERLNYSDAFFDLLNRIFFSFRLILLSFTVGFIALALKKNIFIL 301 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 ++ I ++ + F+++ + Y F I + F+ I +K Sbjct: 302 SLLNSIAFAVVYVISI-VIFNFLADLGYLHIYIASSFTTIFFLIINFFVYRIVRK 355 >gi|218516795|ref|ZP_03513635.1| putative permease protein [Rhizobium etli 8C-3] Length = 102 Score = 61.2 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 38/92 (41%), Positives = 61/92 (66%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YILR +G+ FL++ L ++ I W Q+LQRINLV+ S +S+ K++ ++P++ Sbjct: 11 MKLLETYILRRVGQMFLVALLPVLAIIWTTQVLQRINLVTDSGQSIGSFAKLATMILPSI 70 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNT 92 +P+V PF + T LT+MN ++EL +ID Sbjct: 71 IPVVLPFALVIAITQTLTTMNNDSELTVIDAA 102 >gi|54113817|gb|AAV29542.1| NT02FT0415 [synthetic construct] Length = 353 Score = 60.8 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 43/339 (12%), Positives = 122/339 (35%), Gaps = 11/339 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + YI R + SFL+ + + ++ L +++ +++ + +++ + +P + Sbjct: 3 LNRIDRYIFRTVFSSFLIVSIIFCILFFIFTYLAQVSNNTANVSNFELIIN-TLIQLPGI 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P C + L+ + N+E++++ + G S + K V+ + ++ S+ + Sbjct: 62 LYTLLPACAMVGALMGLSLLANNSEIIVLRSFGRSTAQIAKGVILVGLIGSVTTMVFGGY 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + + + + + + + +Q + + R Sbjct: 122 IAPILQRQVDTNMVTYNTHDLWFKTPDGFMNIANIEPTNGKAYGIRKFMVQDNKVREIRY 181 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ S ++ R+ I S K I I+ + + + S + Sbjct: 182 AESATYINDASANVFNIRKIIF-------PASDGQKHIDIVTNMTNAVWSNPLPISVAKV 234 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + N + + + ++ +F + + Q L +I L+++ + Sbjct: 235 ITINDNNYLNFSQLTSYMLSNSQAKDSISLKFWQEVFQPLSLMILILLAVPLSIG---ST 291 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL 339 + + + + F+ + I I + PIL Sbjct: 292 RSSTLILKLLLGAFFGFAFFIINQIFGPIALILHLPPIL 330 >gi|213423382|ref|ZP_03356370.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 207 Score = 60.8 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 26/200 (13%), Positives = 72/200 (36%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ + ++ + +P + + Sbjct: 7 LDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGNYDALGAGMYTLLSVPKDIQI 66 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 67 FFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAP 126 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+A + ++ L+ + ++ + + Sbjct: 127 QGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELAGISIYAFNDQRRL 186 Query: 184 HKIYYAQSGSIDLDRQAIIL 203 + YA S D + + L Sbjct: 187 QSVRYAASAKFDPEHKVWRL 206 >gi|218661972|ref|ZP_03517902.1| putative permease protein [Rhizobium etli IE4771] Length = 115 Score = 60.8 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 43/103 (41%), Positives = 68/103 (66%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YILR +G+ FL++ L ++ I W Q+LQRINLV+ S +S+ K++ ++P++ Sbjct: 11 MKLLETYILRGVGQMFLVALLPVLAIIWTTQVLQRINLVTDSGQSIGSFAKLATMILPSI 70 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPV 103 +P+V PF + T LT+MN ++EL +ID G R LI+P+ Sbjct: 71 IPVVLPFALVIAITQTLTTMNNDSELTVIDAAGARRSILIRPI 113 >gi|188997596|ref|YP_001931847.1| permease YjgP/YjgQ family protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188932663|gb|ACD67293.1| permease YjgP/YjgQ family protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 356 Score = 60.8 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 47/361 (13%), Positives = 127/361 (35%), Gaps = 14/361 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ + YI + + L+ ++ +I++++ + T + L +P Sbjct: 1 MRILDAYIYKKLFVYLLIIFPSFSIVSALIELIEILKKA--KTIEFSTLTLYILTKLPEN 58 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + + + ++ E+ + G S + ++ +IL+ I I+ Sbjct: 59 AYYIIPISLIVASFMFINDSIKSREIYPVILNGISLNYISIRIIIFSILVVILQVINLET 118 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLE---ENLFFRLDDDLYIKISKYNPNNTLQGIFIVD 177 + PK + L K + ++ ++ ++ ++ ++ ++ N+ + I Sbjct: 119 VMPKTNQIYQTLYLKLKNQQEDEKVKGIAYKMWLKIGENQFLYFDFFDLNSKVGKKLIFI 178 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSP-ISKDISIMKFKSYTLQTESANSS 236 S D + + IY ++ + I +++G + + + + + K + + N Sbjct: 179 SFDKEFNPIYRLEAEDFKVSLDKIEVSNGRLIKINSLDNIIVEKFDKKILDINIDVENIK 238 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 I+L ++S L + + S+F+++L + P + + + Sbjct: 239 KIILAKKPVSISELY-KIASISQAYGYESYYFWSKFYEKLATVIAPFVLTVFILGFIWT- 296 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 I + ++G S I E ++ F I M+ Sbjct: 297 ------NNKLYITSGFLATVFYWYGTSLISAVAEVGNIPYFSIFFFDVVFLVIGFYMLNS 350 Query: 357 K 357 K Sbjct: 351 K 351 >gi|313680813|ref|YP_004058552.1| permease yjgp/yjgq family protein [Oceanithermus profundus DSM 14977] gi|313153528|gb|ADR37379.1| permease YjgP/YjgQ family protein [Oceanithermus profundus DSM 14977] Length = 346 Score = 60.8 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 48/342 (14%), Positives = 111/342 (32%), Gaps = 15/342 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+LR +G L +V + + + + + + + + + +P Sbjct: 1 MNTLSRYLLREVGAYLLGGLAVVVLLLLGGVLFEVLAPLLARGADPLSIGQYLAHRVPEA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + L+ M ++EL ++ +G R ++ ++ LL++ F++ Sbjct: 61 LVRGLPIAYLFALLLALSRMAEDSELKVLLASGIPRERVLGVLVGFGALLALVGFVAGES 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P+ Q+ +A LA + L+ FFR I + + + + + Sbjct: 121 WVPRELQRANQVLREAILAKPRALLQPGTFFRDAYGRTIYVGQVDGQGFGDVRVLSEGEV 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + + G + LD + DG R +I +F+ L E S Sbjct: 181 LTAKRGRF-EPGRLVLDAGMRVTFDGSRPR--------TITEFERGLLPLEDLAVSPP-T 230 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K D L+ L + + + ++ + V + A A Sbjct: 231 KPADLPLAELRRRIAEYKKF-GRPYHAEATAYWRKWAEPAASVA----FALFAVALAFWM 285 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 + + ++ + + + P + Sbjct: 286 LGGSRSLGMVGVVTLTFFYYATWSVFRIMGEQGVLAPWFAAW 327 >gi|228470134|ref|ZP_04055043.1| permease, YjgP/YjgQ family [Porphyromonas uenonis 60-3] gi|228308272|gb|EEK17127.1| permease, YjgP/YjgQ family [Porphyromonas uenonis 60-3] Length = 683 Score = 60.8 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 42/203 (20%), Positives = 87/203 (42%), Gaps = 1/203 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K ++++R LM+ L F+ + + Q I+ + + +LL++ Y VL Sbjct: 11 KIMYIFMVRSFLPLLLMTILICWFVVLMQFLWQHIDDLVGKGMDVGVLLEVIFYAGLYVL 70 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P P + + ++ ELL + + G ++KP++ L +++ LF+ + Sbjct: 71 PTAVPLGVLLASLMTFGNLGERLELLAMKSAGVPLSKIMKPLVILVTCIALGLFVYLDRG 130 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSRD 180 K + Q+ A+ A L + +FF D I + + +TL + I D + Sbjct: 131 VQKASVRVYQILFSARYARPELELPKGIFFNGIDGYSIYVGDKDVATSTLYNVMIYDLSE 190 Query: 181 TQTHKIYYAQSGSIDLDRQAIIL 203 + +I A +G + +D + L Sbjct: 191 QRAPRIILADTGRLLMDDSKLYL 213 Score = 44.2 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 36/89 (40%), Gaps = 6/89 (6%) Query: 270 SEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI 329 E H++ T + ++F + A A+VR+ P+ +++ + F +++ K+ Sbjct: 424 QEMHRKFTFPVACLLFFFVG---APLGAIVRKGGVGTPMVLAV-LIFIIYYVIDTFGLKM 479 Query: 330 EQNPYYIPI--LYLFLFCISSIFLLMIKK 356 + ++L I + + K Sbjct: 480 INSGQIPVWAGMWLSSAVILPLGAFLTYK 508 >gi|219684936|ref|ZP_03539877.1| permease, YjgP/YjgQ family [Borrelia garinii PBr] gi|219671674|gb|EED28730.1| permease, YjgP/YjgQ family [Borrelia garinii PBr] Length = 355 Score = 60.8 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 41/355 (11%), Positives = 109/355 (30%), Gaps = 1/355 (0%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + ++ I +FL L + + + + + +L I +P Sbjct: 2 KIDKLFVKSIILTFLSMNLLFMILIILGDLFVNLLSYLEKNIGFKDILYIYYLYLPKAFS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 F +N++ +++ E++ + + G S +++P++ +++ +S LF +N + Sbjct: 62 DGVALSFLFAISNLIGNLSMRNEIIGLFSCGVSLTRILRPIILISLFISFVLFFFDNYLV 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + L + S + + IK N N + + I+ + Sbjct: 122 IDTVARRDLLIKNSIGNSGSSDKTIIIRDLAREIYNIKSYDINENAFSKLMIIIKDSKDE 181 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 Y ++ + V I ++ + + ++ E T++L + Sbjct: 182 FQTRYDIDKAEWKDNKWRLYGIREFVKVGRKIKENAYDILDGTGIIKLEPDYIRTVMLSS 241 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 N + L+N + + R+ ++ A Sbjct: 242 KALNFTKLIN-WISFLKSEHLNYSDALFDLLNRVFFSFRLILLSFTVGFIALALKKNIFI 300 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + F+++ + Y F I + + I +K Sbjct: 301 LSLLNSIAFAVVYVISIVIFNFLADLGYLHIYVASSFTTVFFLIINFLVYRIVRK 355 >gi|237752465|ref|ZP_04582945.1| predicted protein [Helicobacter winghamensis ATCC BAA-430] gi|229375954|gb|EEO26045.1| predicted protein [Helicobacter winghamensis ATCC BAA-430] Length = 357 Score = 60.8 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 45/359 (12%), Positives = 118/359 (32%), Gaps = 13/359 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK F Y+ + F + + I +++ ++ + S S N+ + + Y Sbjct: 1 MKLFFRYVSFLYLKYFFYLFVSLECFFVAIDLVKFLDDLPS---SANLFILLLAYDFMYA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + +L ++ ++++ G ++I + P+ L+ +++ Sbjct: 58 SQFILPLSLILAQIVLLINLLKSSQFTAFLALGFAKIKIFYPIFLLSFCITLLFIALNAT 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + +LF + + + Y +G+ + + Sbjct: 118 PFAYAKER----VDLIIDQGFVGNYKSDLFVKYNQNYIYFKKIYPLLQRAEGVIVYEINP 173 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI---SKDISIMKFKSYTLQTESANSST 237 TQ +S + Q IL + + K+ ++ ++ Sbjct: 174 TQNSLTRIVESKMAQFNGQDWILENVTITTLDDNLELGKNPLKIQKETTYKTLHDFKPKI 233 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLE--TYRSEFHKRLTQWLF-PVIFGLISIVAAD 294 + Q +L+ + + R + L LF P+I +++ + Sbjct: 234 LDNIYEKQGSISILDAFEAFMLLKEQNANTQKVRGALYNLLFFPLFAPLIMICLAVFIPN 293 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + + + I++G+F+ FS + P + I+ +F ++S F Sbjct: 294 SNRYANFSLMTLAMILGVLITWGIFFSFSKLSISGFLQPEFSVIMPIFTLFLASSFCFY 352 >gi|166154183|ref|YP_001654301.1| putative membrane transport protein [Chlamydia trachomatis 434/Bu] gi|166155058|ref|YP_001653313.1| putative membrane transport protein [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335428|ref|ZP_07223672.1| putative membrane transport protein [Chlamydia trachomatis L2tet1] gi|165930171|emb|CAP03655.1| putative membrane transport protein [Chlamydia trachomatis 434/Bu] gi|165931046|emb|CAP06609.1| putative membrane transport protein [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 354 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 41/348 (11%), Positives = 113/348 (32%), Gaps = 9/348 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M ++ ++ + L ++ I+ + + + ++ ++ + K++ Y IP + Sbjct: 1 MPILWKVLIFRYLKTTVFCTLSLICISIISSLQEIVSYIA-KDVPYATVFKVTAYQIPYL 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP + P + + ++ N ++ + +G S+ +I PVL + +L F F + + Sbjct: 60 LPFILPASCFISAFTLFRKLSDNNQITFLKASGASQGMIIFPVLIASGVLCCFNFYTCSE 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKI---SKYNPNNTLQGIFIVD 177 + CR + A + L+ D N + + Sbjct: 120 LASICRFQTGKAIANIAMTSPALLLQTLQKKENDRIFIAIDHCGKSKFDNVIIALKHNQE 179 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + + + +++ + + + ++ ++T Sbjct: 180 ISNIGFIETIIPDVNKDSVQAKNVLVISKIPLFSEARTSNPNEFYLETLDEFLIPKITAT 239 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + P + + +E +R+ L + + Sbjct: 240 LFAGKSYMKTRTDYLPWKQLI----QDARLHLAEILRRIAIGLLCSTMTFSGLALGTYKP 295 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC 345 R+ I+ +F L++ F + G + I + P L +L Sbjct: 296 RFRKPVLIYALFPILNLIFLI-VGKNTIHPISAVMLFLFPQLLSWLIF 342 >gi|325268898|ref|ZP_08135523.1| hypothetical protein HMPREF9141_0732 [Prevotella multiformis DSM 16608] gi|324988870|gb|EGC20828.1| hypothetical protein HMPREF9141_0732 [Prevotella multiformis DSM 16608] Length = 640 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 31/222 (13%), Positives = 86/222 (38%), Gaps = 2/222 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + +++I R G F + +F+ + + + ++ + S+++L + Y+ ++ Sbjct: 5 RKLDIFIARQFGMLFAGTFFISLFVLMMQFLWRYVDDLIGKGLSVDVLGQFFWYMSLMMV 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P P + + ++ ++EL I + G S + + ++ +++L++ F +N + Sbjct: 65 PQALPLAILLSSLISYGNLGESSELTAIRSAGISLVQSFRGLIVISVLIACGSFYFQNNV 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN--PNNTLQGIFIVDSR 179 P + I QL + + E +F+ + + + K + + + + Sbjct: 125 GPSAQKHIAQLLISMKQKSPELEIPEGIFYDGIPNTNLYVEKKDLKTGHLYNIMVYRMTD 184 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIM 221 + I A SG + + L + + M Sbjct: 185 SYEDQAIILADSGMLQSTAEKKHLVLNLWSGEWFENMRSQEM 226 >gi|291296717|ref|YP_003508115.1| permease YjgP/YjgQ family protein [Meiothermus ruber DSM 1279] gi|290471676|gb|ADD29095.1| permease YjgP/YjgQ family protein [Meiothermus ruber DSM 1279] Length = 338 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 46/350 (13%), Positives = 98/350 (28%), Gaps = 21/350 (6%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 Y+LR +L+ L V + + + + ++++ Y +P L + Sbjct: 2 LPRYLLRETLSLYLLGVLLFVGLITFDLLSSLSGAFLRARTPVGEIVQMVAYRVPHTLGI 61 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P L R +EL G I PVL LA+ + + ++E ++P Sbjct: 62 ALPLGLVFALLVALARWIRQSELKAAYAAGIPPRVFIGPVLLLALAVGAVVLLNEGWLKP 121 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + L K S + + + P Q ++ Sbjct: 122 IAQERFEALQYKIYYGSEPSGVLTERTYTPQGLGIYYAQRIYPPPEGQ-------TGSRL 174 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 + +SG + + G ++ D S F+ + Sbjct: 175 EGVRVVESGGSVWSAERGVWVSGAWRLQNAYRVDPSGQIFQEAEHPLPFPVGVQPKAVSY 234 Query: 244 D-QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + + L +P + +R + V+ ++IV Sbjct: 235 EALRMPELHAVASADPAAQFP--------LARRYANAVGTVVLAWLAIVIGLSLRES--- 283 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 + + FG + F+ + +L + LL Sbjct: 284 --AWAFIAVVGLIFGYWTLFTLSAQFARFDLLGAYGAWLPNIVYGGLALL 331 >gi|289612795|emb|CBI60020.1| unnamed protein product [Sordaria macrospora] Length = 187 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 27/185 (14%), Positives = 71/185 (38%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M S + Y+ R I + L + + ++L+ + V++ ++++ ++ L+P Sbjct: 1 MPSIDRYMARLIAVPLFSTLLISAMLLVLDRMLRLFDFVAAEGGPVSVVWRMLANLLPEY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + + ++EL ++ G S L++ A +L+ Sbjct: 61 LGLGIPIGLMLGILLAFRKLATSSELDVMLGVGMSYWRLLRVPFIYATVLAAANLAIVGY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I+P R + L + + + ++ F +L + + ++I + + V + Sbjct: 121 IQPLARYNYEALRFELRTGALGASIKVGEFTKLGERMTLRIEESRDSGADLRGIFVQASR 180 Query: 181 TQTHK 185 Sbjct: 181 PDGQW 185 >gi|332976301|gb|EGK13158.1| permease YjgP/YjgQ [Psychrobacter sp. 1501(2011)] Length = 455 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 13/134 (9%), Positives = 42/134 (31%), Gaps = 2/134 (1%) Query: 224 KSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPV 283 +L + + +A D +L+ L + N + L + F ++L + Sbjct: 323 DVISLPISPNSVYLLTRRAEDLSLTQLYDHKQFNASQGTRSL-EHEVAFWQKLLSPFAIL 381 Query: 284 IFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 +++ + + + F + + + ++ L + Sbjct: 382 SLVIVACSFVFGSLRTHSLGLRIVVALIFGLLFSYIQDLTSFVSLATGASPLL-MVLLPI 440 Query: 344 FCISSIFLLMIKKK 357 + + +IK++ Sbjct: 441 IASALLGFYLIKRQ 454 Score = 55.4 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 29/190 (15%), Positives = 58/190 (30%), Gaps = 1/190 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K Y+ + L + L + + V L + + S + + L Y P L Sbjct: 19 KIISRYVKTNALFAMLFAVLGLWALQIVFAYLAELEDI-SDSYTYFDALTYILYKSPYFL 77 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 TP + L + N+EL+++ G S ++ VL A + I + Sbjct: 78 EQFTPTGALLGAVIGLGLLANNSELIVMRAAGLSIYRIVSWVLQPAFIFVILALGINQYV 137 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ Q+ L L + +N + + + + Sbjct: 138 LPETNLMANQIRKPDTALLASVNGYWTLQNAPAVGETAQKEGATGHNIIYIDYADANGNI 197 Query: 182 QTHKIYYAQS 191 K ++ Sbjct: 198 GKVKRWHLDK 207 >gi|260592583|ref|ZP_05858041.1| putative permease [Prevotella veroralis F0319] gi|260535353|gb|EEX17970.1| putative permease [Prevotella veroralis F0319] Length = 644 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 30/222 (13%), Positives = 84/222 (37%), Gaps = 2/222 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +++I + G F + +F+ + + + ++ + S+ +L + Y+ ++ Sbjct: 5 KKLDIFIAKQFGMLFAGTFFISLFVLMMQFLWRYVDDLIGKGLSMEVLGQFFWYMSLMMV 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P P + + ++ ++EL I + G S I + ++ ++++++ F +N I Sbjct: 65 PQALPLAILLSSLIAYGNLGESSELTAIKSAGISLIQSFRGLIVISVIIAGASFYFQNNI 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN--NTLQGIFIVDSR 179 P + + QL + + E +F+ + + + + + + + Sbjct: 125 GPMAQKNMAQLLISMRHKSPELEIPEGVFYDGIPQTNLYVERKDMKSGHLYNIMVYRMTD 184 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIM 221 + I A SG + + L + + M Sbjct: 185 SYEDQAIILADSGMLQSTAEKKHLVLNLWSGEWFENMRSQEM 226 Score = 37.3 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 15/106 (14%), Positives = 37/106 (34%), Gaps = 8/106 (7%) Query: 251 LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFI 310 L+ + +++ + EF + T L ++F I A A++R+ PI + Sbjct: 353 LDFKSMITSDGDKMIRQHEIEFINKFTISLICIVFFFIG---APLGAIIRKGGLGIPIIV 409 Query: 311 SLSISFGVFWGFSYIIHKIEQNPYYIPI-----LYLFLFCISSIFL 351 S+ + + + Q + I + + + + Sbjct: 410 SVLVFIVYYILDNTGYRMSRQGDWAIWFGRGLSMAVLVPMAAFFTY 455 >gi|240948566|ref|ZP_04752939.1| hypothetical protein AM305_06766 [Actinobacillus minor NM305] gi|240297074|gb|EER47645.1| hypothetical protein AM305_06766 [Actinobacillus minor NM305] Length = 309 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 45/297 (15%), Positives = 92/297 (30%), Gaps = 15/297 (5%) Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + ++ P + L +E+ ++ G + L K LFL+I + + Sbjct: 1 MAQLMLPLSLFIALLLTLGRFYAESEITVMRACGIGQGLLAKVALFLSIFTTALAVYNVF 60 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL--YIKISKYNPNNTLQGIFIVD 177 + P + +L A+A+ FS L F + I+ +F D Sbjct: 61 WLTPWAINKQSELLAEAKANPRFSALSAGQFMTAGGYVLFIDNINYDQNKLNDIYVFQPD 120 Query: 178 SRDTQTHKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + + A SG + Q + L + + + D I F++YT + Sbjct: 121 QQKKNRPSVIVADSGELKGLPNGDQILTLENSTRYEGTAKVADFRISHFENYTAYLGHQD 180 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + L + + R+E R I L+++ + Sbjct: 181 VDSD----------EKLVQRADWAKLVADKSPEARAELQWRFALIFATPIMALLAVPMSS 230 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + K+ P + I F + + +P + + F I I + Sbjct: 231 VNPRQGRFAKLLPALLLYLIYFLLQSTLKSSGASGKLDPTILMPVVSVAFLILGIVM 287 >gi|168701113|ref|ZP_02733390.1| hypothetical protein GobsU_16419 [Gemmata obscuriglobus UQM 2246] Length = 410 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 41/413 (9%), Positives = 114/413 (27%), Gaps = 60/413 (14%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + I + R FL+S + + V+ +Q+ + + SL L++ L+P++L Sbjct: 4 TTLNRMIFWELVRVFLLSLGSLTGLVLVVMSVQQASQL---GLSLAQLVRAVPLLVPSIL 60 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P+ P V + + E++ + G ++KP L L +L + + Sbjct: 61 PIAIPATTLFAACVVYGRLAHDNEVIALKAAGVHLFGIVKPTLLLGVLTTATTAALAHST 120 Query: 122 EPKCRSTIKQL-----SAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 P+ + + + + K + ++ Sbjct: 121 IPRTQQMFWDEILSDPEEVLYNMIRRDRCLRHPSLPNVLYVRDVEGKRLIDVVVKRRIKE 180 Query: 177 DSRDTQTHKIY-YAQSGSIDLDRQAIILNDGEVHR------KSPISKDISIMKFKSYTLQ 229 T + Y + + + + G + + S ++ + Sbjct: 181 KDPRTGAEVVMGYDMVARMHEAQLRVDVAAGTLSIEPDRLVIDGKNASGSAASSGAFVMD 240 Query: 230 TESANS-STIVLKANDQNLSFL-------------------------------------- 250 + + LK + L Sbjct: 241 LPDSVTGKEARLKTSTLTWDELPERAAGVAAKLDRITRERAARQAEINQMDPNLRANAQA 300 Query: 251 -LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIF 309 + + L ++E H R + ++F L+ + + + Sbjct: 301 QIEGYNFEIAGTTKQLRNLQAEVHARPALAVSCLVFALVGCPVGV---YLNRSDYLSTFM 357 Query: 310 ISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--FCISSIFLLMIKKKYTK 360 + + V++ + ++ L + + ++ +L+ + + Sbjct: 358 MCFLPTLLVYYPLLLAGTDMGKSGRLPMALGCWAADIVMGAVGVLLAWRLLRR 410 >gi|154174950|ref|YP_001408879.1| methionyl-tRNA formyltransferase [Campylobacter curvus 525.92] gi|112803667|gb|EAU01011.1| methionyl-tRNA formyltransferase [Campylobacter curvus 525.92] Length = 356 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 43/357 (12%), Positives = 99/357 (27%), Gaps = 4/357 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 + + Y+ +SFL+ + I +L + + + S N+ L G + + Sbjct: 3 LNLYARYVGWVYLKSFLIVFFALELFYVGIDLLTNLKDLPN---SANLQLLYVGLTLLSA 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P +M R+ EL+ G S+ LI P F+A+ ++ Sbjct: 60 VSYVMPISLVFALIISHINMVRSNELVSFYALGVSKNGLILPPFFIALAVTFLYVGLNCT 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 K ++ + + + + + S+ N + Sbjct: 120 PFAYAYDYQKSIAKNTSFSKSTTDSFLKFEGKFIYIKELSASQKNAKDVRIFDINGTDLL 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + T + + + R + + + + Sbjct: 180 STTFADGAKFKNNHWQLQDVNQTLLPKDLRLGQKGLSVQNFDELDALSGFKPKSIESANA 239 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + L++ +S F+ F L+ Sbjct: 240 ADGARFSIPDTLDFIFTFKNEGVELDSVKSAFYSLAIAPFFAPFLILVLYYHLPMTGRFF 299 Query: 301 QRKKIHPIFISLSISF-GVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 IF+ +++ GV + + P + +L + L I+LL + Sbjct: 300 NLAFASFIFVVITLVIWGVLFVLTRFAQSSVILPEFGIVLPVILLFAYGIYLLKTHR 356 >gi|15618904|ref|NP_225190.1| hypothetical protein CPn0996 [Chlamydophila pneumoniae CWL029] gi|15836527|ref|NP_301051.1| hypothetical protein CPj0996 [Chlamydophila pneumoniae J138] gi|16752031|ref|NP_445397.1| hypothetical protein CP0859 [Chlamydophila pneumoniae AR39] gi|4377325|gb|AAD19133.1| CT839 hypothetical protein [Chlamydophila pneumoniae CWL029] gi|7189771|gb|AAF38648.1| conserved hypothetical protein [Chlamydophila pneumoniae AR39] gi|8979369|dbj|BAA99203.1| CT839 hypothetical protein [Chlamydophila pneumoniae J138] Length = 357 Score = 60.4 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 49/364 (13%), Positives = 125/364 (34%), Gaps = 14/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M ++ ++ L ++ I+ + + + + ++ + +L++ Y IP + Sbjct: 1 MPILWKVLIFRYLKTAAFCTLSLICISIISSLQEIVAYIA-KDVPYDTVLRLMAYQIPYL 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP + P + ++ ++ N + + +G S+ ++ PVL ++ + F + + Sbjct: 60 LPFILPGSCFVSAFSLFRKLSDNNHMTFLRASGASQSIIMFPVLMVSGAICCLNFYTCSE 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + CR + A + L + +++ + + + + + Sbjct: 120 LASICRYQTCKEIANMAMTSPALLL--QTLQKKENNRIFIAVDHCAKSKFDNVIVALKGN 177 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPIS----KDISIMKFKSYTLQTESANSS 236 + + +S D + + D K P S S +F TL Sbjct: 178 NEISHVGIIKSIIPDTTKDTVKAKDVVFISKLPDSLTESSSPSSQRFYIETLDELLIPKI 237 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 T L A L + P + L ++ E +R+ + ++ + Sbjct: 238 TSTLFAGKSYLKTRTDYLPWKQLVKQSLKHSHLPETLRRVAIGFLCITLTYAGMILGIHK 297 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R+ I+L F + I+ K +N +L++F +S + Sbjct: 298 PRFRKS-------IALYFIFPILDLILLIVGKNTKNLPLAFMLFVFPQLVSWVVFAARAY 350 Query: 357 KYTK 360 + ++ Sbjct: 351 RESR 354 >gi|29840522|ref|NP_829628.1| YjgP/YjgQ family protein [Chlamydophila caviae GPIC] gi|29834871|gb|AAP05506.1| YjgP/YjgQ family protein [Chlamydophila caviae GPIC] Length = 357 Score = 60.4 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 37/362 (10%), Positives = 119/362 (32%), Gaps = 16/362 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M ++ ++ L ++ I+ + + + ++ ++ +L+++ Y IP + Sbjct: 1 MPILWKVLIFRYLKTVTFCTLSLICISIISSLQEIVSYIA-KDVPYLTVLRLTAYQIPYL 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP + P + + ++ N ++ + +G S+ + P+L ++ + F + + Sbjct: 60 LPFILPVSCFISAFALFRGLSDNNQITFLKASGASQGIITFPILMVSCAICCINFYTCSE 119 Query: 121 IEPKCRSTIKQLSAKAQLALTF---SYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD 177 + CR + A + L++ R+ + N + + Sbjct: 120 LASICRFQTCKEIANMAMTSPTLLLQTLQKKENNRIFITVDHCAKSKFDNVIIALKRDKE 179 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKF-KSYTLQTESANSS 236 + K + ++ + +++ + S + ++ +S Sbjct: 180 IANVGIIKTIIPDVANDTVEARDVVMISKLPSTLTEQHSSNSKEYYIETLDEMLIPKITS 239 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 T+ + P + + E +R++ L + +V + Sbjct: 240 TLFAGKSYMKTRTDYLPWKQ--LVKQSFSHAHLPETLRRISIGLLCITLTYSGMVLGTYK 297 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R+ ++ IF + + + + +P +F+ +++ + Sbjct: 298 PRFRKSITLYCIFPVMDLILLI---------VGKNTTTLLPAFMMFIIPQVITWIVFSIR 348 Query: 357 KY 358 Y Sbjct: 349 AY 350 >gi|288802960|ref|ZP_06408396.1| putative permease [Prevotella melaninogenica D18] gi|288334477|gb|EFC72916.1| putative permease [Prevotella melaninogenica D18] Length = 640 Score = 60.4 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 82/222 (36%), Gaps = 2/222 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +++I + G F+ + +F+ + + + ++ + S+++L + Y+ ++ Sbjct: 5 KKLDIFIAKQFGMLFMGTFFISLFVLMMQFLWRYVDDLIGKGLSMDVLGQFFWYMSLMMV 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P P + + ++ ++EL I G S I + ++ ++I ++ F +N + Sbjct: 65 PQALPLAILLSSLISYGNLGESSELTAIKAAGISLIQSFRGLIVVSIFIAFGSFYFQNNV 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN--PNNTLQGIFIVDSR 179 P I QL + + E +F+ + + K + + + + Sbjct: 125 GPIAHKHIAQLLISMKQKSPELEIPEGIFYDGIPQTNLYVEKKDLKTGHLYNIMVYRMTD 184 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIM 221 + I A SG + L + + M Sbjct: 185 SYEDQAIILADSGMLQSTADKKHLVLNLWSGEWFENMRSQEM 226 >gi|302345159|ref|YP_003813512.1| permease, YjgP/YjgQ family [Prevotella melaninogenica ATCC 25845] gi|302149884|gb|ADK96146.1| permease, YjgP/YjgQ family [Prevotella melaninogenica ATCC 25845] Length = 640 Score = 60.4 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 82/222 (36%), Gaps = 2/222 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +++I + G F+ + +F+ + + + ++ + S+++L + Y+ ++ Sbjct: 5 KKLDIFIAKQFGMLFMGTFFISLFVLMMQFLWRYVDDLIGKGLSMDVLGQFFWYMSLMMV 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P P + + ++ ++EL I G S I + ++ ++I ++ F +N + Sbjct: 65 PQALPLAILLSSLISYGNLGESSELTAIKAAGISLIQSFRGLIVVSIFIAFGSFYFQNNV 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN--PNNTLQGIFIVDSR 179 P I QL + + E +F+ + + K + + + + Sbjct: 125 GPIAHKHIAQLLISMKQKSPELEIPEGIFYDGIPQTNLYVEKKDLKTGHLYNIMVYRMTD 184 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIM 221 + I A SG + L + + M Sbjct: 185 SYEDQAIILADSGMLQSTADKKHLVLNLWSGEWFENMRSQEM 226 >gi|219685681|ref|ZP_03540495.1| permease, YjgP/YjgQ family [Borrelia garinii Far04] gi|219672797|gb|EED29822.1| permease, YjgP/YjgQ family [Borrelia garinii Far04] Length = 355 Score = 60.4 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 40/355 (11%), Positives = 108/355 (30%), Gaps = 1/355 (0%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + ++ I +FL L + + + + + +L I +P Sbjct: 2 KIDKLFVKSIILTFLSMNLLFMILIILGDLFVNLLSYLEKNIGFKDILYIYYLYLPKAFS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 F +N++ +++ E++ + + G S +++P++ +++ +S LF +N + Sbjct: 62 DGVALSFLFAISNLIGNLSMRNEIIGLFSCGVSLTRILRPIILISLFISFVLFFFDNYLV 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + L + + + IK N N + + I+ + Sbjct: 122 IDTVARRDLLIKNSIGNSGSIDQTIIIRDLAREIYNIKSYDINENAFSKLMIIIKDSKDE 181 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 Y ++ + V I ++ + + ++ E T++L + Sbjct: 182 FQTRYDIDKAEWKDNKWRLYGIREFVKVGRKIKENAYDILDGTGIIKLEPDYIRTVMLSS 241 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 N + L+N + + R+ ++ A Sbjct: 242 KALNFTKLIN-WISFLKSEHLNYSDALFDLLNRVFFSFRLILLSFTVGFIALALKKNIFI 300 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + F+++ + Y F I + + I +K Sbjct: 301 LSLLNSIAFAVVYVISIVIFNFLADLGYLHIYVASSFTTVFFLIINFLVYRIVRK 355 >gi|330997503|ref|ZP_08321352.1| permease, YjgP/YjgQ family [Paraprevotella xylaniphila YIT 11841] gi|329570534|gb|EGG52258.1| permease, YjgP/YjgQ family [Paraprevotella xylaniphila YIT 11841] Length = 633 Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 72/183 (39%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K ++++ + F+ + +FI + + + ++ + +L++L Y T++ Sbjct: 5 KKIDIFVFKAYSLLFVGTFFICLFIFLMQFMWRYVDELIGKGLTLDVLAHFFYYASLTLI 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PM P + + ++ ELL + G + +++P++ ILL I F +NI Sbjct: 65 PMSLPLAILLASLITFGNLGERFELLSMKAAGIPLVRILQPIIIFNILLCIGSFYFQNIT 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + L + + E +F+ I + K N + ++ S Sbjct: 125 GPEAQKKFYTLIYSMKQKSPELEIPEGIFYSEIPGYNIFVEKKGKENGMLYGVMIYSTTD 184 Query: 182 QTH 184 Sbjct: 185 GYE 187 Score = 46.1 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 24/143 (16%), Positives = 55/143 (38%), Gaps = 8/143 (5%) Query: 218 ISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRP--ELLETYRSEFHKR 275 + F + + + ++ A ++ + + T+ E+HK+ Sbjct: 316 RQTLNFDTLYSKLTVSQQQGVLRNAMQKSTIATNEYEFRGLISKDIDQSTRTHWVEWHKK 375 Query: 276 LTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY 335 T L + F I A A++R+ P+ IS++I F ++ + K+ ++ + Sbjct: 376 FTLSLACLFFFFIG---APLGAIIRKGGLGVPVVISVTI-FIFYYIINVSGEKMAKSGEW 431 Query: 336 IPIL--YLFLFCISSIFLLMIKK 356 IP +L + I + + K Sbjct: 432 IPWFGEWLSSMVLCPIGIFLTYK 454 >gi|33242365|ref|NP_877306.1| hypothetical protein CpB1034 [Chlamydophila pneumoniae TW-183] gi|33236876|gb|AAP98963.1| hypothetical protein CpB1034 [Chlamydophila pneumoniae TW-183] Length = 357 Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 49/364 (13%), Positives = 124/364 (34%), Gaps = 14/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M ++ ++ L ++ I+ + + + + ++ + +L++ Y IP + Sbjct: 1 MPILWKVLIFRYLKTAAFCTLSLICISIISSLQEIVAYIA-KDVPYDTVLRLMAYQIPYL 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP + P + ++ ++ N + + +G S+ ++ PVL ++ + F + + Sbjct: 60 LPFILPGSCFVSAFSLFRKLSDNNHMTFLRASGASQSIIMFPVLMVSGAICCLNFYTCSE 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + CR + A + L + +++ + + + + + Sbjct: 120 LASICRYQTCKEIANMAMTSPALLL--QTLQKKENNRIFIAVDHCAKSKFDNVIVALKGN 177 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPIS----KDISIMKFKSYTLQTESANSS 236 + + +S D + + D K P S S +F TL Sbjct: 178 NEISHVGIIKSIIPDTTKDTVKAKDVVFISKLPDSLTESSSPSSQRFYIETLDELLIPKI 237 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 T L A L + P + L + E +R+ + ++ + Sbjct: 238 TSTLFAGKSYLKTRTDYLPWKQLVKQSLKHPHLPETLRRVAIGFLCITLTYAGMILGIHK 297 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R+ I+L F + I+ K +N +L++F +S + Sbjct: 298 PRFRKS-------IALYFIFPILDLILLIVGKNTKNLPLAFMLFVFPQLVSWVVFAARAY 350 Query: 357 KYTK 360 + ++ Sbjct: 351 RESR 354 >gi|226329628|ref|ZP_03805146.1| hypothetical protein PROPEN_03538 [Proteus penneri ATCC 35198] gi|225202814|gb|EEG85168.1| hypothetical protein PROPEN_03538 [Proteus penneri ATCC 35198] Length = 232 Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 32/214 (14%), Positives = 81/214 (37%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI R I +S LM+ +V ++ +I+ + ++ V + + I + + Sbjct: 5 LDRYIGRTILQSILMTLFLLVSLSGIIKFVDQLRKVGQGDFTTLDAGIYAILNILKDVQI 64 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L ++ +EL+++ +G +R+ + V+ AI L + + P Sbjct: 65 FFPMAALLGALLGLGALATRSELVVMQASGFTRLQIAGSVMKTAIPLVLLTVLIGEWGAP 124 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + A+ + + ++ + + + N + D + Sbjct: 125 QGEQYARNYRAEKIMGNSLVSTNRGMWAKDGNQFIHINRIKSQNEMQGITLYDFNNDRKL 184 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKD 217 + YA S + D+D++ + R + +K Sbjct: 185 ETVRYASSATYDVDKKNVDAKTSRTIRLNQSTKK 218 >gi|332880892|ref|ZP_08448562.1| permease, YjgP/YjgQ family [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332681066|gb|EGJ53993.1| permease, YjgP/YjgQ family [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 633 Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 72/183 (39%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K ++++ + F+ + +FI + + + ++ + +L++L Y T++ Sbjct: 5 KKIDIFVFKAYSLLFVGTFFICLFIFMMQFMWRYVDELIGKGLTLDVLAHFFYYAGLTLI 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PM P + + ++ ELL + G I +++P++ ILL I F +N+ Sbjct: 65 PMSLPLAILLASLITFGNLGERFELLSMKAAGIPLIRILQPIIIFNILLCIGSFYFQNVT 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + L + + E +F+ I + K N + ++ S Sbjct: 125 GPEAQKKFYTLIYSMKQKSPELEIPEGIFYSEIPGYNIFVEKKGKENGMLYGVMIYSTTD 184 Query: 182 QTH 184 Sbjct: 185 GYE 187 Score = 46.1 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 56/149 (37%), Gaps = 8/149 (5%) Query: 212 SPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRP--ELLETYR 269 + F + Q + +I+ A ++ + + T+ Sbjct: 310 DSTKIARQTLNFDTLYSQLTVSQQQSILRNAMQKSTVATNEYEFRGLISKDIDQSTRTHW 369 Query: 270 SEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI 329 E+HK+ T L + F I A A++R+ P+ IS++I F ++ + K+ Sbjct: 370 VEWHKKFTLSLACLFFFFIG---APLGAIIRKGGLGVPVVISVTI-FIFYYIINVSGEKM 425 Query: 330 EQNPYYIPIL--YLFLFCISSIFLLMIKK 356 ++ ++P +L + I + + K Sbjct: 426 AKSGEWVPWFGEWLSSMVLCPIGIFLTYK 454 >gi|297620917|ref|YP_003709054.1| putative permease, YjgP/YjgQ family [Waddlia chondrophila WSU 86-1044] gi|297376218|gb|ADI38048.1| putative permease, YjgP/YjgQ family [Waddlia chondrophila WSU 86-1044] Length = 359 Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 40/360 (11%), Positives = 113/360 (31%), Gaps = 9/360 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRIN-LVSSSTESLNILLKISGYLIPTV 60 K +E Y ++ ++F + +I S + L+K Sbjct: 4 KIWERYFIKETLKTFFFISFCFYGLYVLIDYASHSGARHHQSMMEWSELIKFYANEWILR 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ PF + T L +N + EL+ + +G S +++P +FL +L ++ ++ + Sbjct: 64 ADVLVPFALMIATIRTLCDLNIHNELVALQASGISLKKILRPFIFLGLLFTLLIYANTEF 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + L + ++ + + D + ++ + Sbjct: 124 LLPNAMAASRHLRNQKEIQKNNKNKKFFVQHVGLKDGSTLLYQHYNFAERSFFDAYWVKS 183 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ---TESANSST 237 + S + + ++ P + I F+S + Sbjct: 184 FDEIWRFQHLSPYEQPPKGIGV----GHFQRMPDNTLHKIESFESRSFPEMKFNQKILLD 239 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + + +LS L P++ E + + F + + + Sbjct: 240 TLTPSRELSLSTLWKRLPHSKEIESEKEAEFAASFFHKSALPWLCFFAVIAPAPFCVRYG 299 Query: 298 LVRQRKKIHPIFISLSIS-FGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 I+ + + + + + I + +P + LF ++++ + + Sbjct: 300 RSHPIFFIYSLSLFFLVGSYLILNAALIISERQVLSPEVAIGVPFMLFSSTTLYRFLYRS 359 >gi|269302797|gb|ACZ32897.1| putative permease, YjgP/YjgQ family [Chlamydophila pneumoniae LPCoLN] Length = 357 Score = 60.0 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 49/364 (13%), Positives = 126/364 (34%), Gaps = 14/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M ++ ++ L ++ I+ + + + + ++ + +L++ Y IP + Sbjct: 1 MPILWKVLIFRYLKTAAFCTLSLICISIISSLQEIVAYIA-KDVPYDTVLRLMAYQIPYL 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP + P + ++ ++ N ++ + +G S+ ++ PVL ++ + F + + Sbjct: 60 LPFILPGSCFVSAFSLFRKLSDNNQMTFLRASGASQSIIMFPVLMVSGAICCLNFYTCSE 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + CR + A + L + +++ + + + + + Sbjct: 120 LASICRYQTCKEIANMAMTSPALLL--QTLQKKENNRIFIAVDHCAKSKFDNVIVALKGN 177 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPIS----KDISIMKFKSYTLQTESANSS 236 + + +S D + + D K P S S +F TL Sbjct: 178 NEISHVGIIKSIIPDTTKDTVKAKDVVFISKLPDSLTESSSPSSQRFYIETLDELLIPKI 237 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 T L A L + P + L ++ E +R+ + ++ + Sbjct: 238 TSTLFAGKSYLKTRTDYLPWKQLVKQSLKHSHLPETLRRVAIGFLCITLTYAGMILGIHK 297 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R+ I+L F + I+ K +N +L++F +S + Sbjct: 298 PRFRKS-------IALYFIFPILDLILLIVGKNTKNLPLAFMLFVFPQLVSWVVFAARAY 350 Query: 357 KYTK 360 + ++ Sbjct: 351 RESR 354 >gi|153822424|ref|ZP_01975091.1| conserved hypothetical protein [Vibrio cholerae B33] gi|126520067|gb|EAZ77290.1| conserved hypothetical protein [Vibrio cholerae B33] Length = 164 Score = 60.0 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 30/161 (18%), Positives = 65/161 (40%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + YI R I + + + V ++ +I+ ++++ V + L L IP + Sbjct: 3 KILDWYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGEGSYDLLQALLFVVLSIPRDV 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 M P + L ++ ++EL+++ G S++ + VL AI L I + + Sbjct: 63 EMFFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIIVTLLGEWG 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS 162 P+ + + + A A + ++ R +D Sbjct: 123 APQAQKMARDMRAFATSGGAIMSVRTGVWARDANDFIFIAK 163 >gi|269213540|ref|ZP_06158031.1| permease, YjgP/YjgQ family [Neisseria cinerea ATCC 14685] gi|269146392|gb|EEZ72810.1| permease, YjgP/YjgQ family [Neisseria cinerea ATCC 14685] Length = 181 Score = 60.0 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 19/158 (12%), Positives = 50/158 (31%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +I+ + + + + + + +P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEIINEVGDLGKGSYNGATMAQYVLMQMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + +EL +I +G S L+ + ++ +I Sbjct: 61 AYELMPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLVLSQFGLIFAIATAALGEW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLY 158 I P + + + A + Sbjct: 121 IAPVLSQKAENIKSTAINGKISTGNTGLWLKEKTASST 158 >gi|282860179|ref|ZP_06269254.1| putative membrane protein [Prevotella bivia JCVIHMP010] gi|282587068|gb|EFB92298.1| putative membrane protein [Prevotella bivia JCVIHMP010] Length = 633 Score = 60.0 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 86/222 (38%), Gaps = 2/222 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +++I + G F + +F+ + + + I+ + ++++L + GY+ ++ Sbjct: 5 KKLDIFIAKQFGMLFTGTFFISLFVLMMQFLWRSIDDLIGKGLTVDVLAQFFGYMALMLV 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P P + + ++ ++EL I + G S + ++ IL++I F +N + Sbjct: 65 PQALPLAVLLSSLMTYGNLGESSELTAIKSAGISLFQSFRGLIATTILITILSFYFQNNV 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN--NTLQGIFIVDSR 179 P + I QL + + E +F+ + + K + N + + + Sbjct: 125 APIAQKHIYQLLISMKQKSPELEIPEGVFYDGIPQTNLYVEKKDLNTGHLYNIMVYRMTD 184 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIM 221 + I A SG + + L + + + + Sbjct: 185 SYEDQAIILADSGMLQSTAEKKHLILNLWNGEWFENMRSQGI 226 >gi|307718798|ref|YP_003874330.1| hypothetical protein STHERM_c11120 [Spirochaeta thermophila DSM 6192] gi|306532523|gb|ADN02057.1| hypothetical protein STHERM_c11120 [Spirochaeta thermophila DSM 6192] Length = 424 Score = 60.0 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 25/178 (14%), Positives = 59/178 (33%), Gaps = 2/178 (1%) Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 R+ ++ + +R+ ++ H K S+ + TL + + + Sbjct: 246 RNPGPREMSSVDVYRVMKEREQVLEQKRRSHEKERDDLRRSVSRLYLTTLSLSNESIRSR 305 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 L + +L L L+ Y EFHK+ + + F L++I Sbjct: 306 FLGSLRSSLQRLRQKERITIE--DRTLQIYTLEFHKKFSIPFSCIPFVLLAIAIGLFNLK 363 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + +G+ + + +P L L + ++ L +++K Sbjct: 364 GGRAAGFGIGIFLSILYWGMLVAGQMLGLRTSFSPSLAMWLPNILITLVALTLFLVRK 421 Score = 53.9 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 56/420 (13%), Positives = 121/420 (28%), Gaps = 65/420 (15%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y+ I SF++S LF I + Q L + S L ++ + Y +P+++ Sbjct: 8 TLYRYVGEEIALSFVISFLFFFVIFLINQFLLMAEQILSKRAPLFDVILLIIYALPSIVA 67 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + PF +T ++ + E L G S + P++ ++LLS F++ + Sbjct: 68 ISVPFASLAAALMSITRLSSDNEFLAFQAGGISLVHAFLPMVVFSLLLSSVSFVANDYFL 127 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +L + LE + I I + + + I++ + Sbjct: 128 PLGTLNFAKLYRQILYTTPEIELESYAIKEYQN--TILIPGKVNQSHIDDLLIIEETEEG 185 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRK-----SPISKDISIMKFKSYTLQTESANSST 237 T + + + + L + S + +YT+ + N + Sbjct: 186 TRILQAREGDIVPGRNEKTALALELHDVFLSLVKREGDYEYSSAETLTYTILVKDINIAL 245 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSE----------------------FHKR 275 + + + + ++ E R Sbjct: 246 RNPGPREMSSVDVYRVMKEREQVLEQKRRSHEKERDDLRRSVSRLYLTTLSLSNESIRSR 305 Query: 276 LTQWL------------------------------FPVIFGLISIV--AADKRALVRQRK 303 L F + F I V A + Sbjct: 306 FLGSLRSSLQRLRQKERITIEDRTLQIYTLEFHKKFSIPFSCIPFVLLAIAIGLFNLKGG 365 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL---FCISSIFLLMIKKKYTK 360 + I + +S ++WG + + P L ++L L + +K + Sbjct: 366 RAAGFGIGIFLSI-LYWGMLVAGQMLGLRTSFSPSLAMWLPNILITLVALTLFLVRKVRR 424 >gi|282892297|ref|ZP_06300693.1| hypothetical protein pah_c221o031 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281497888|gb|EFB40239.1| hypothetical protein pah_c221o031 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 359 Score = 60.0 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 38/357 (10%), Positives = 102/357 (28%), Gaps = 23/357 (6%) Query: 22 FIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMN 81 V I + I ++ + + ++ IP +LP+V P + + ++ ++ Sbjct: 2 AFVAILLTTRF-DEIAHFAALGAAGSHIIWFIVSQIPYILPIVIPISSLIASLLLIQRLS 60 Query: 82 RNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALT 141 + EL + +G + ++ P+L A +++ F + + L + + Sbjct: 61 QTHELTALRASGWAIRDILYPILIAAAFIALLNFYIVSELATNSHLQASLLKKELRSINP 120 Query: 142 FSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSI------- 194 L R+ + + + Sbjct: 121 LLLLNNKHLMRVKGAYFHAMGNSRVGEFAKNALFAMPSKQNNRIQLMIAKSLHADSVLFI 180 Query: 195 -----------DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 + ++ E K+ + F+ + + +L Sbjct: 181 GNSVTNMTTLPVENGESFDHFVVENLEKTMTPIQDFSLIFQRNVFSLSNDHLKLSLLIYR 240 Query: 244 DQNLSFLL---NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + + L N + +E +R + + F L+ + R Sbjct: 241 MKEQALHLRQPNLLREEMKQLQKQQNRSYAEIIRRFSLAIAVFSFTLMGCAFGMNISRHR 300 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 K I+L++ + + + + I + + ++ L S F+L + Sbjct: 301 -SNKGVVFVIALAVFYLISYFTAKGIEHHLFSATLLYLIPHLLILGISSFILYRVSR 356 >gi|255322347|ref|ZP_05363493.1| ribonuclease PH [Campylobacter showae RM3277] gi|255300720|gb|EET79991.1| ribonuclease PH [Campylobacter showae RM3277] Length = 341 Score = 60.0 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 46/340 (13%), Positives = 106/340 (31%), Gaps = 12/340 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+ +F + I ++ +Q + S + L K+ +++P V Sbjct: 1 MDRTARYLFSNFLGTFASLFATLFLIMSIVFFIQIARITSYIEITFIELFKLYMFMLPRV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P F + + ++R E +++ G S + + K L ++ +SIFL ++ I Sbjct: 61 LLFTVPIAFFVSLALMFFRLSRENESIVLFTLGYSPVRIAKFFLIVSGAVSIFLIVTAII 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + + + + D + ++ + N + Sbjct: 121 LIPTAAELNSNFVSYKKTVAKLNLKTTEFGQKFSDWMVFIQNEKSDENGTLYEGVTLYSP 180 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + + L +L K +D S K T++ +A ++ Sbjct: 181 KEGAHRFVLAK-NARLTNNNAVLEFTLSEGKIYDMRDASWHKTDFGTMKISTAQEDSVAQ 239 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + ++ + F + LFP+ L ++ Sbjct: 240 TKSFVQYWQAMSEDKKRAKD-----------FATYVLIALFPLATTLFALSLGIVTYRYE 288 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY 340 + IF L F + FS + + + + Sbjct: 289 KGFVYFGIFGVLFGYFTLIMLFSSRVFIAIAAIFLLFFIA 328 >gi|296272453|ref|YP_003655084.1| permease YjgP/YjgQ family protein [Arcobacter nitrofigilis DSM 7299] gi|296096627|gb|ADG92577.1| permease YjgP/YjgQ family protein [Arcobacter nitrofigilis DSM 7299] Length = 356 Score = 59.6 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 52/361 (14%), Positives = 114/361 (31%), Gaps = 13/361 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ Y+LR R+F++ + + I LQ + V + S N+ L Y Sbjct: 1 MRIITKYLLRKFIRNFVIVLISLQIFFVGIDFLQNFDEVPN---SANLQLLYILYNSFFT 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + M + E++ + G + PV+ ++I+L + L + Sbjct: 58 LTLTLPLSLVFGWIITIVIMVKTNEMVASFSLGVGNRQIFMPVVNVSIILIVLLIGFQMT 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 K F+ + ++F + +D Y + I I D Sbjct: 118 PLAYSYE----YKEKILKNTYFTSSKSDIFVKYNDYFVYFKKLYPLQKYAEDIHIYKVVD 173 Query: 181 TQTHKIYYAQSGSIDLDRQAII-LNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + A+ +R ++ + + + + + + E + Sbjct: 174 DDIEEGIVAKKAYFQNNRWYVLDARITKKPKVIDWNNSKIEIHHEKFLYTLEGFKPKILD 233 Query: 240 LKANDQNLSFLLNPNPNNPNYRPE--LLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + +L+ + R+ + + L+ V ++ + Sbjct: 234 SVYESTSSFSILDAITALTLLNDQEVNTSKIRASLYYEIVAPLYFVPLIILIFSYTSFNS 293 Query: 298 LVRQRKKIHPIFISLSISF-GVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 K I+ ++ GVF+ NP + L +F I ++IKK Sbjct: 294 RFFNIGKFTSFSIAATLVIWGVFFMLHKFSSGGVINPEISIL--LPIFLWYIITYILIKK 351 Query: 357 K 357 + Sbjct: 352 Q 352 >gi|294674577|ref|YP_003575193.1| hypothetical protein PRU_1912 [Prevotella ruminicola 23] gi|294473775|gb|ADE83164.1| putative membrane protein [Prevotella ruminicola 23] Length = 662 Score = 59.6 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 30/222 (13%), Positives = 82/222 (36%), Gaps = 2/222 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +++I + G F+ + F+ + + + ++ + SL ++ + Y+ ++ Sbjct: 5 KKLDIFIAKQFGLLFVGTFFICQFVLMMQFLWRYVDELIGKGLSLEVMAQFFWYMGLMLM 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P P + + ++ ++EL I G S + + ++ +++L++ F +N++ Sbjct: 65 PQAFPLAILLSSLIAFGNLGESSELTAIKAAGISLMQAFRSLIIISVLMAGISFYFQNVV 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKY--NPNNTLQGIFIVDSR 179 P+ +L + + E +F+ I + K N + + Sbjct: 125 GPRANQDFYRLLLGMKQKSPELEIPEGVFYDGIPGSNIYVQKKDLNTGMLYGIMIYRMTG 184 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIM 221 + I A SG + + L + + + Sbjct: 185 SYEDQAIILADSGMMQSTAEKKHLLLTLYNGVWNENMRSQDL 226 >gi|288929933|ref|ZP_06423775.1| putative permease [Prevotella sp. oral taxon 317 str. F0108] gi|288328752|gb|EFC67341.1| putative permease [Prevotella sp. oral taxon 317 str. F0108] Length = 630 Score = 59.6 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 31/204 (15%), Positives = 79/204 (38%), Gaps = 2/204 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +++I + G FL + +F+ + + + ++ + ++ +L + ++ ++ Sbjct: 5 KKLDIFICKQFGMLFLGTFFICLFVLMMQFLWRYVDELVGKGLTIEVLAQFFWWMGLMMV 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P P + + ++ ++EL I + G S ++ ++ +S F+ +N I Sbjct: 65 PQALPLAILLSSLITFGNLGESSELTAIKSAGISLTRTFSSLVVVSCFISATSFVFQNNI 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN--NTLQGIFIVDSR 179 P + QL + + E +F+ + I + K + + S Sbjct: 125 GPYSTIKLSQLLVSMKQKNPELEIPEGVFYDGIPNSNIYVQKKDVKTGKFYGIMIYRMSN 184 Query: 180 DTQTHKIYYAQSGSIDLDRQAIIL 203 + +I A SG + + L Sbjct: 185 SYEDSEIILADSGMLQTTAEKQHL 208 Score = 42.3 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 13/93 (13%), Positives = 36/93 (38%), Gaps = 6/93 (6%) Query: 262 PELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWG 321 ++ ++ E +K+ L +IF I A ++R+ P+ +S+ + + Sbjct: 363 NRMIRQHKIEMYKKFVLSLSCLIFFFIG---APLGTIIRKGGLGIPVIVSVLVFIVYYIL 419 Query: 322 FSYIIHKIEQNPYYIP---ILYLFLFCISSIFL 351 + + + I +L + ++F+ Sbjct: 420 DNSGYQMARRGIWAIWFGELLATMVLVPLAVFV 452 >gi|237752929|ref|ZP_04583409.1| conserved hypothetical protein [Helicobacter winghamensis ATCC BAA-430] gi|229375196|gb|EEO25287.1| conserved hypothetical protein [Helicobacter winghamensis ATCC BAA-430] Length = 344 Score = 59.6 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 51/356 (14%), Positives = 131/356 (36%), Gaps = 13/356 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + ++ + + F L + FIA V+ ++ + S LL + Y +PT+L Sbjct: 2 RIKNFLFQSFAQVFFPIFLVLFFIASVVIFIRIAGVTFVVKISFLELLTLYFYTLPTMLF 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 V P F + L+ ++ + EL ++ G + ++K +A+L S+ LF+ I+ Sbjct: 62 FVIPLSFFVACVLGLSRLSFDYELPVLFALGMNPKKIVKIFFPIALLASVSLFVLSLILT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +Q + + ++ + +L + L N + + ++ +Q Sbjct: 122 PLSDIAYRQFLEERKSSIDVNLQAGEFGQKLGEWLVYVQKGKNSTYENIVLLSLQAKGSQ 181 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + +A+ +I + + + +S + + F L++ + + Sbjct: 182 KDGLVFAKQANIGNVDGVMEAHLSDGKIYRKVSDGVERISFDEMILRSAVDFTGDGSVGL 241 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + + + R L+ ++ +F LIS+ + R Sbjct: 242 VEYWNRAFYENSRQDKTKRN-------------LSMYVLLSLFPLISLFYFPFLGVKNPR 288 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + + + + GVF+ YI+ + + ++ + +++ + + Y Sbjct: 289 YQKNYTILQAMVVVGVFFALMYIVATYLPLAGMVLLPCIWGYIGYALYKHYVARFY 344 >gi|153824249|ref|ZP_01976916.1| permease YjgP/YjgQ family protein [Vibrio cholerae B33] gi|126518229|gb|EAZ75454.1| permease YjgP/YjgQ family protein [Vibrio cholerae B33] Length = 155 Score = 59.6 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 15/132 (11%), Positives = 41/132 (31%), Gaps = 1/132 (0%) Query: 225 SYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVI 284 + + + +K + +L+ L + + + Y +++TQ + + Sbjct: 24 RWRTSLAPDKLAVVTVKPEELSLTGL-SDYVHYLKASEQDSSRYELALWRKVTQPISIAV 82 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 L+++ + SF + F + + P L L Sbjct: 83 MMLMALSFIFGPLRSVTMGARILSGVIAGFSFYISSEFFGPLSLVYGLPPLFGALAPSLV 142 Query: 345 CISSIFLLMIKK 356 ++ L+ +K Sbjct: 143 FLAIALGLLGRK 154 >gi|325300373|ref|YP_004260290.1| permease YjgP/YjgQ family protein [Bacteroides salanitronis DSM 18170] gi|324319926|gb|ADY37817.1| permease YjgP/YjgQ family protein [Bacteroides salanitronis DSM 18170] Length = 636 Score = 59.6 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 78/205 (38%), Gaps = 2/205 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +++IL+ F + +FI + + + ++ + +NIL + Y T++ Sbjct: 5 KKLDIFILKSFLLLFAGTFFICLFIFMMQFLWRYVDELVGKGLEINILAQFFFYSGLTLI 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P+ P + + ELL + G + ++ PV+ L + FI +N I Sbjct: 65 PISLPLAILLAALMTFGNFGERYELLSMKAAGIPLLRIMCPVILFCAFLGLMSFIFQNEI 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + L + + E +F+ D I + + + ++ + Sbjct: 125 GPRAQKKLWTLLVSMKQKSPEVDIPEGVFYSEIDGYNIYVKHKDRETGMLKDVLIYNFSD 184 Query: 182 Q--THKIYYAQSGSIDLDRQAIILN 204 I +A+ G +++ L Sbjct: 185 GFENAHIIWAEEGKLEMTADKKHLY 209 Score = 37.3 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 20/137 (14%), Positives = 46/137 (33%), Gaps = 2/137 (1%) Query: 217 DISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRP--ELLETYRSEFHK 274 +++ + S S S+ + K ++ S L + + + ++RS++HK Sbjct: 315 NVAYINTDSIFNSMTSQEKSSTLSKTENRVSSLLSECEMKSFLTKDTDRNILSHRSDWHK 374 Query: 275 RLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY 334 ++T L +IF I + + I + + G + + E N Sbjct: 375 KITLSLACLIFFFIGAPLGAIIRKGGLGMPVVISVVIFVIYYIIDSGATRVGKSGEMNVA 434 Query: 335 YIPILYLFLFCISSIFL 351 + + F Sbjct: 435 LGTWMSTLVLAPLGAFF 451 >gi|327314112|ref|YP_004329549.1| permease [Prevotella denticola F0289] gi|326944181|gb|AEA20066.1| permease, YjgP/YjgQ family [Prevotella denticola F0289] Length = 645 Score = 59.6 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 31/222 (13%), Positives = 86/222 (38%), Gaps = 2/222 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + +++I R G F + +F+ + + + ++ + S+++L + Y+ ++ Sbjct: 6 RKLDIFIARQFGMLFAGTFFISLFVLMMQFLWRYVDDLIGKGLSMDVLGQFFWYMSLMMV 65 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P P + + ++ ++EL I + G S + + ++ +++L++ F +N + Sbjct: 66 PQALPLAILLSSLISYGNLGESSELTAIKSAGISLVQSFRGLIVISVLIACGSFYFQNNV 125 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN--PNNTLQGIFIVDSR 179 P + I QL + + E +F+ + + + K + + + + Sbjct: 126 GPSAQKHIAQLLISMKQKSPELEIPEGIFYDGIPNTNLYVEKKDLKTGHLYNIMVYRMTD 185 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIM 221 + I A SG + + L + + M Sbjct: 186 SYEDQAIILADSGMLQSTAEKKHLVLNLWSGEWFENMRSQEM 227 >gi|281423648|ref|ZP_06254561.1| putative permease [Prevotella oris F0302] gi|281402200|gb|EFB33031.1| putative permease [Prevotella oris F0302] Length = 637 Score = 59.6 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 32/209 (15%), Positives = 79/209 (37%), Gaps = 2/209 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +++I + G F+ + F+ + + + I+ + S+ I+ K Y+ ++ Sbjct: 10 KKLDIFIAKQFGMLFVGTFFICQFVLMMQFLWRYIDDLIGKGLSMEIMAKFFWYMGLMLV 69 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P P + + ++ ++EL I G S + + ++ + + +S F+ +N I Sbjct: 70 PQALPLAILLSSLIAFGNLGESSELTAIKAAGISLMQAFRSLIVITLFVSGVSFVFQNNI 129 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN--PNNTLQGIFIVDSR 179 P+ + I QL + + E +F+ + + + + + + Sbjct: 130 GPEANNKIAQLLMSMKQKSPELEIPEGIFYDGIPNSNLYVQHKDLKTGKLYGIMIYRMTG 189 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEV 208 + I A SG + + L Sbjct: 190 SYEDQAIILADSGMLQSTAEKKHLVLSLW 218 >gi|160887737|ref|ZP_02068740.1| hypothetical protein BACUNI_00139 [Bacteroides uniformis ATCC 8492] gi|317478670|ref|ZP_07937825.1| hypothetical protein HMPREF1007_00941 [Bacteroides sp. 4_1_36] gi|156862768|gb|EDO56199.1| hypothetical protein BACUNI_00139 [Bacteroides uniformis ATCC 8492] gi|316905181|gb|EFV26980.1| hypothetical protein HMPREF1007_00941 [Bacteroides sp. 4_1_36] Length = 633 Score = 59.6 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 29/205 (14%), Positives = 80/205 (39%), Gaps = 2/205 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K ++++L+ F+ + +FI + + + ++ + + +L + Y +++ Sbjct: 5 KKLDIFVLKSFCMLFMGTFFICLFIFMMQFLWRYVDEMVGKGLEMTVLAQFFFYSALSLV 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P P + + ELL + G S + +++P++ + F +N+I Sbjct: 65 PASLPLAILLAALITFGNFGERFELLAMKAAGISLLKIMRPLIIFICFICCVSFYFQNVI 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 PK ++ + L + + E +F+ D + + N + ++ + + Sbjct: 125 GPKAQTKLWTLLISMKQKSPEVDIPEGVFYDEIDGYNLYVKHKNRKTGMLYDVLIYNFEK 184 Query: 182 Q--THKIYYAQSGSIDLDRQAIILN 204 +I + SG +++ L Sbjct: 185 GFENAQIIKSDSGRLEMTADKQHLY 209 >gi|281422565|ref|ZP_06253564.1| putative permease [Prevotella copri DSM 18205] gi|281403389|gb|EFB34069.1| putative permease [Prevotella copri DSM 18205] Length = 632 Score = 59.6 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 24/183 (13%), Positives = 71/183 (38%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +++I + G F+ + F+ + + + I+ + +++++ + Y+ ++ Sbjct: 5 KKLDIFIAKQFGLLFMGTFFICQFVLMMQFLWRYIDELIGKGLTMDVMAQFFWYMGLMLV 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P P + + ++ ++EL I G S + + ++ + I++ F +N + Sbjct: 65 PQALPLAILLSSLMTFGNLGESSELTAIKAAGISLMQAFRSLIVITIIIMFGSFYFQNNV 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 PK + QL + + E +F+ + + + K + ++ Sbjct: 125 GPKSNMKLAQLLISMKQKSPELEIPEGIFYDGIPNCNLYVQKKDLKTGKLYGIMIYRMTD 184 Query: 182 QTH 184 Sbjct: 185 SYE 187 Score = 37.3 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 22/180 (12%), Positives = 50/180 (27%), Gaps = 6/180 (3%) Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPIS----KDISIMKFKSYTLQTESA 233 + D + Y G I L+ + G S K + F + + Sbjct: 273 NHDIDSLNQLYDSIGRIYLNEANVRFYGGAQRINKKDSLKEIKKGEKLIFDTLYNKLPQD 332 Query: 234 NSSTIVLKANDQNLSFLLNPNPNNPNYRP--ELLETYRSEFHKRLTQWLFPVIFGLISIV 291 V +A L + + + + ++ ++ E + T L +IF I Sbjct: 333 KKLMAVNQAQSTVQQELSDLDFKSMSTSDADYMIRQHKIEAINKFTLALSCLIFFFIGAP 392 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + + + F + + ++ L + +IF+ Sbjct: 393 LGAIIRKGGLGFPVVISVLVFIVFFILDNTGYRMSRSGMWAIWFGKGLAPAVLTPLAIFV 452 >gi|299141277|ref|ZP_07034414.1| permease [Prevotella oris C735] gi|298577237|gb|EFI49106.1| permease [Prevotella oris C735] Length = 632 Score = 59.2 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 32/209 (15%), Positives = 79/209 (37%), Gaps = 2/209 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +++I + G F+ + F+ + + + I+ + S+ I+ K Y+ ++ Sbjct: 5 KKLDIFIAKQFGMLFVGTFFICQFVLMMQFLWRYIDDLIGKGLSMEIMAKFFWYMGLMLV 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P P + + ++ ++EL I G S + + ++ + + +S F+ +N I Sbjct: 65 PQALPLAILLSSLIAFGNLGESSELTAIKAAGISLMQAFRSLIVITLFVSGVSFVFQNNI 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN--PNNTLQGIFIVDSR 179 P+ + I QL + + E +F+ + + + + + + Sbjct: 125 GPEANNKIAQLLMSMKQKSPELEIPEGIFYDGIPNSNLYVQHKDLKTGKLYGIMIYRMTG 184 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEV 208 + I A SG + + L Sbjct: 185 SYEDQAIILADSGMLQSTAEKKHLMLSLW 213 >gi|109947019|ref|YP_664247.1| hypothetical protein Hac_0413 [Helicobacter acinonychis str. Sheeba] gi|109714240|emb|CAJ99248.1| conserved hypothetical protein [Helicobacter acinonychis str. Sheeba] Length = 356 Score = 59.2 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 50/353 (14%), Positives = 119/353 (33%), Gaps = 11/353 (3%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 Y+ + + F L + FI+ ++ ++ ++ S L+++ Y +P + + Sbjct: 15 RYLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFIL 74 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 P F L+ ++ + ELL+ + G S + K + L+IL+S L + ++ P Sbjct: 75 PITFFAACALGLSRLSYDHELLVFFSLGVSPKKMTKAFVPLSILVSAILLVFSLVLIPTS 134 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHK 185 +S + + + + +L D L NN+ + + ++ Sbjct: 135 KSAYYGFLHQKKDKIDINIRVGEFGQKLGDWLVYV--DKAENNSYDNLVLFSNKSLSQES 192 Query: 186 IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQ 245 AQ G+I+ LN + H + + F+ L+ + + + Sbjct: 193 FILAQKGNINNQNGVFELNLYKGHAYFTQGDKMRKIDFEELHLRNKLKSFNANDASYLQG 252 Query: 246 NLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKI 305 + + + LFP+ + + + Sbjct: 253 TDYLGYWKRAFGKSANKSQKRRFSQA----ILVSLFPLASVFLIPLFGIANPRFKTNWSY 308 Query: 306 HPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + ++ I F + S + + +++ F +F I K+Y Sbjct: 309 FYVLGAVGIYFLMVHVISTDLFLMT-----FIFPFIWAFASYLLFRKFILKRY 356 >gi|296532232|ref|ZP_06894979.1| permease YjgP/YjgQ family protein [Roseomonas cervicalis ATCC 49957] gi|296267439|gb|EFH13317.1| permease YjgP/YjgQ family protein [Roseomonas cervicalis ATCC 49957] Length = 369 Score = 59.2 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 34/354 (9%), Positives = 92/354 (25%), Gaps = 12/354 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTVL 61 + YI R L + + + ++ + ++ ++ I+ +P V+ Sbjct: 6 TLSAYIARRFAGMALAMVAALAALVALFDFIELLRRAATRADAGFALVASIAALRLPYVV 65 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIK-PVLFLAILLSIFLFISENI 120 + PF + ++R +EL++ G S + + PVL + ++ + + + Sbjct: 66 LQILPFAVLLGGIVAFWRLSRASELVVARAAGVSAWSFLLGPVLVALAMGTLAITVVSPL 125 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + + A S L + D ++ + + Sbjct: 126 SAAMMARAERLDATYLRNATGLSSLAGGKLWLRQADESVEPGGVAILAGVPEVGRDGFLL 185 Query: 181 TQTHKIYY--AQSGSIDLDRQAIILNDGEVHRKS----PISKDISIMKFKSYTLQTESAN 234 + + L G + + Sbjct: 186 RGASLWRFSATDRPIGRAEAPLARLEPGAWVLQEAVSFGRDRQPLPAATLRLPTSLTPDR 245 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + + L +R FH L + + + A Sbjct: 246 IEETFASPDTLSFWAL-PGFIAVLESAGFSAVRHRLTFHS--LLSLPLLAAAMALLAAGF 302 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 R+ + + ++ F +F + + Q L + ++ Sbjct: 303 SMRHARRGGVGRMLGLGIAAGFALFL-LDKVAEEFGQAGTLPVALAAWAPSVAG 355 >gi|296120596|ref|YP_003628374.1| permease YjgP/YjgQ family protein [Planctomyces limnophilus DSM 3776] gi|296012936|gb|ADG66175.1| permease YjgP/YjgQ family protein [Planctomyces limnophilus DSM 3776] Length = 373 Score = 59.2 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 54/367 (14%), Positives = 118/367 (32%), Gaps = 18/367 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTES------LNILLKISG 54 M +F+ Y+L+ F + + + I +L+ ++ + +S L + G Sbjct: 1 MWTFDQYLLKNFFYVFFVCFVAAFGLVVTIDLLENLDEFMLNNQSGGALSLLVSIGTYYG 60 Query: 55 YLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFL 114 Y L + VL R+ EL + G +++ ++ +L++ L Sbjct: 61 YQAIFFLDRGGASLMVIAVMVVLVLFQRSGELHPMLAAGVPMYRVLRALMIGPVLVTAVL 120 Query: 115 FISENIIEPKCRSTIKQLSAKA-----QLALTFSYLEENLFFRLDDDLYIKISKYNPNNT 169 ++ ++ P Q+ + Y + L + Sbjct: 121 VANQELVVPVIAHAAHGGRGIQTGEGGQVEPIYDYSTKISINGEKVSLADSQLEGAQFVL 180 Query: 170 LQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHR--KSPISKDISIMKFKSYT 227 + + D + + ++ D I + +P ++I +S Sbjct: 181 PAPLIVHDLTIIRGTTAIFRKAAGQRPDGWVIFGAAPQFEELALTPRGQEIVRKVGRSGE 240 Query: 228 LQTESA----NSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPV 283 L S +N + S LL N Y P ++ + ++ H RLTQ L + Sbjct: 241 LFIASPVSCDQLFKRKSSSNYLSTSELL-GRIRNEAYGPLAVQKFVTQVHGRLTQPLINL 299 Query: 284 IFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 I L+S+ +R ++ I FG+ +Y+ +F+ Sbjct: 300 IAVLLSLPLLVRRESAGLVMDSGVCAVAQGILFGMMQLSAYLSTSGIIAADLAAWFPVFI 359 Query: 344 FCISSIF 350 + + Sbjct: 360 GGAMAAW 366 >gi|197105522|ref|YP_002130899.1| hypothetical protein PHZ_c2059 [Phenylobacterium zucineum HLK1] gi|196478942|gb|ACG78470.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1] Length = 386 Score = 58.9 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 55/329 (16%), Positives = 109/329 (33%), Gaps = 12/329 (3%) Query: 40 SSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITL 99 S S+E + +++ L+P + + P F + V+ MN+ +E+ + G S L Sbjct: 30 SESSERFTFVAQLAVNLVPHYVGLTLPAAFFIALIIVVNRMNQASEIDALLAAGVSLTRL 89 Query: 100 IKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYI 159 P L LA +LS I ++P R + + AQ A + E +DDL + Sbjct: 90 AAPYLVLAGVLSFLTLIVFGALQPYSRYAYRAVLHAAQNAGWSGQVPEGTIIAPNDDLIM 149 Query: 160 KISKYNPNNTL-QGIFIVDSRDTQTHKIYYAQSGSIDLD----RQAIILNDGEVHRKSPI 214 + + +FI ++ A + ++L DG+ R + Sbjct: 150 TTDQADAAGQRLTRVFIRRLTPEGREEVTTAGVAELRRTADGKNVTLMLKDGQQLRFNR- 208 Query: 215 SKDISIMKFKSYTLQTESANS----STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRS 270 + ++ F+ +T+Q + + NL L N ET + Sbjct: 209 RGEPELLSFEDFTMQLPLSGPARLLRARGGDERELNLFEL--AKKANDPQSVIPRETLLA 266 Query: 271 EFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIE 330 E + RL + L + L+++ + + I L + Sbjct: 267 ELYGRLARALALPLLPLLAVPLGLSAKRSGRAPGVIVGGILLLAFHHLIQLGQSFAETGR 326 Query: 331 QNPYYIPILYLFLFCISSIFLLMIKKKYT 359 + F + + +K Sbjct: 327 APAEAGVGIPFVAFAAICFTVFLTSRKRP 355 >gi|315185937|gb|EFU19701.1| permease YjgP/YjgQ family protein [Spirochaeta thermophila DSM 6578] Length = 424 Score = 58.9 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 23/177 (12%), Positives = 56/177 (31%), Gaps = 2/177 (1%) Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 R+ ++ + +R+ ++ H K S+ TL + + + Sbjct: 246 RNPGPREMSSVDVYRVMKEREQVLEQKRRSHEKERDDLRRSVSSLYLTTLSLSNESIRSR 305 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 L +L L L+ Y EFHK+ + + F L++I Sbjct: 306 FLGNLRSSLQRL--REKERIRIEDRTLQIYTLEFHKKFSIPFSCIPFVLLAIAIGLFNLK 363 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + +G+ + + +P + + + ++ L +I+ Sbjct: 364 GGRAAGFGIGIFLSIVYWGMLVAGQMLGLRTSFSPSLAMWVPNIIISLVALTLFLIR 420 Score = 51.9 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 40/274 (14%), Positives = 90/274 (32%), Gaps = 7/274 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y+ I SF++S LF I + Q L + S L ++ + Y +P+++ Sbjct: 8 TLYRYVGEEIALSFVISFLFFFVIFLINQFLLLAEQILSKRAPLFDVILLIIYALPSIVA 67 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + PF +T ++ + E L G S + P++ +LLS F++ + Sbjct: 68 ISVPFASLAAALMSITRLSSDNEFLAFQAGGISLLHAFLPMVVFGLLLSSVSFVANDYFL 127 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +L + LE + I I + + + I++ + Sbjct: 128 PLGTLNFAKLYRQILYTTPEIELESYAIKEYQN--TILIPGKVNQSHIDDLLIIEETEEG 185 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRK-----SPISKDISIMKFKSYTLQTESANSST 237 T + + + + L + S + +YT+ + N + Sbjct: 186 TRILQAREGDIVPGRNEKTALALELHDVFLSLVKREGDYEYSSAETLTYTILVKDINIAL 245 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSE 271 + + + + ++ E Sbjct: 246 RNPGPREMSSVDVYRVMKEREQVLEQKRRSHEKE 279 >gi|257465009|ref|ZP_05629380.1| hypothetical protein AM202_00770 [Actinobacillus minor 202] gi|257450669|gb|EEV24712.1| hypothetical protein AM202_00770 [Actinobacillus minor 202] Length = 309 Score = 58.9 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 43/297 (14%), Positives = 92/297 (30%), Gaps = 15/297 (5%) Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 + ++ P + L +E+ ++ G + L K LFL+I + + Sbjct: 1 MAQLMLPLSLFIALLLTLGRFYAESEITVMRACGIGQGLLAKVALFLSIFTTALAVYNVF 60 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL--YIKISKYNPNNTLQGIFIVD 177 + P + +L A+A+ FS L F + I+ +F D Sbjct: 61 WLTPWSINKQSELLAEAKANPRFSALSAGQFMTAGGYVLFIDNINYDQNKLNDIYVFQPD 120 Query: 178 SRDTQTHKIYYAQSGSI---DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + + A SG + Q + L + + + D I F++YT + Sbjct: 121 QQKKNRPSVIVADSGELKGLPNGDQILTLENSTRYEGTAKVADFRISHFENYTAYLGHQD 180 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD 294 + L + + ++E R + L+++ + Sbjct: 181 VDSD----------EKLVQRADWAKLVADKSPEAQAELQWRFALIFATPLMALLAVPMSS 230 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + K+ P + I F + + +P + + F I I + Sbjct: 231 VNPRQGRFAKLLPALLLYLIYFLLQSTLKSSGASGKLDPTILMPVVSVAFLILGIVM 287 >gi|153827723|ref|ZP_01980390.1| inner membrane protein YjgP [Vibrio cholerae MZO-2] gi|149737800|gb|EDM52705.1| inner membrane protein YjgP [Vibrio cholerae MZO-2] Length = 199 Score = 58.9 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 26/181 (14%), Positives = 65/181 (35%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + + + ++ + S +++L I G +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASDGEIPTSMILSIVGLNMPAMGL 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + + +E+ +++ TG LI+ L+LA++ + + + Sbjct: 62 LMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWLA 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + L + + L++ F R D + N L +F+ Sbjct: 122 PWSQDKEAHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLYNVFVAQLAPRD 181 Query: 183 T 183 + Sbjct: 182 S 182 >gi|268678855|ref|YP_003303286.1| permease YjgP/YjgQ family protein [Sulfurospirillum deleyianum DSM 6946] gi|268616886|gb|ACZ11251.1| permease YjgP/YjgQ family protein [Sulfurospirillum deleyianum DSM 6946] Length = 353 Score = 58.9 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 41/359 (11%), Positives = 112/359 (31%), Gaps = 9/359 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK FE YI++ ++FL+ + + + +L + S N+ + + + + Sbjct: 1 MKLFETYIIKNYLKNFLVIFIGLDLFYVGVDLLTNYKNIPD---SANLQILYALFQAMSA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P +M + EL+ + + ++ L++P+ +A++LS+ Sbjct: 58 INYVLPLSIVFAMIVTYFAMLKTNELICMYASSITKKALVRPLFGVALVLSLLHIGLNYT 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 L +++ + L + + K + Sbjct: 118 EFAYAYEYGSNLKKYNRISNSSEDLFIKHDQQYVYFKKLDPLKQVAYDVTIFDVESADVK 177 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + ++ I + + I + + + Sbjct: 178 RIIRAKMASFVKDVWWLKEVEITHKPSITSLDDKGFWIEKQETLQAMKNFKPKIMDNVYQ 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 ++ ++ + +S Q FP +S++ L+ Sbjct: 238 SDFSLSIRDGIDALRF-FETQGVNTSKIKSTL---FYQLFFPFFAPFLSVILFYNAPLMG 293 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP--ILYLFLFCISSIFLLMIKKK 357 + + S + + W +++ ++ N IP ++L + ++ I L K+ Sbjct: 294 RYFNTALVASSFAFVTLLVWSSLFLLSRLAINSVLIPEIAIFLPIVMLAFIALYFYVKR 352 >gi|269963274|ref|ZP_06177606.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269831989|gb|EEZ86116.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 235 Score = 58.9 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 16/162 (9%), Positives = 51/162 (31%), Gaps = 14/162 (8%) Query: 193 SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLN 252 + RQ I +++G + P + + KF Y + L+ Sbjct: 66 ELSDGRQIITMHEGTRYEGVPTRVEYMVTKFDQYEGVIGQREVKQKGRDWEAYPTADLI- 124 Query: 253 PNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISL 312 ++E R++ + L++++ A+ ++ + + ++ Sbjct: 125 ---------GHPDPEAQAELQWRISL-FVCI--PLLTMLVIPLSAVNPRQGRFAKMGPAI 172 Query: 313 SISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 I F S + ++ + ++ + + ++ Sbjct: 173 LIYLAYFLAISATKSAL-EDGAIPATIGMWPINAMLLIVAIL 213 >gi|51599060|ref|YP_073248.1| hypothetical protein BG0834 [Borrelia garinii PBi] gi|51573631|gb|AAU07656.1| hypothetical protein BG0834 [Borrelia garinii PBi] Length = 355 Score = 58.5 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 42/355 (11%), Positives = 110/355 (30%), Gaps = 1/355 (0%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ ++ I +FL L + + + + + +L I +P Sbjct: 2 KIDMLFVKSIILTFLSMNLLFMILIILGDLFVNLLSYLEKNIGFKDILYIYYLYLPKAFS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 F +N++ +++ E++ + + G S +++P++ +++ +S LF +N + Sbjct: 62 DGVALSFLFAISNLIGNLSMRNEIIGLFSCGVSLTRILRPIILISLFISFVLFFFDNYLV 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + L + S + + IK N N + I+ + Sbjct: 122 IDTVARRDLLIKNSIGNSRSSDKTIIIRDLAREIYNIKSYDINENAFSNLMIIIKDSKDE 181 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 Y ++ + V I ++ + + ++ E T++L + Sbjct: 182 FQTRYDIDKAEWKDNKWRLYGIREFVKVGRKIKENAYDILDGTGIIKLEPDYIRTVMLSS 241 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 N + L+N + + R+ ++ A Sbjct: 242 KALNFTKLIN-WISFLKSEHLNYSDALFDLLNRVFFSFRLILLSFTVGFIALALKKNIFI 300 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + F+++ + Y F I + F+ I +K Sbjct: 301 LSLLNSIAFAVVYVISIVIFNFLADLGYLHIYVASSFTTIFFLIINFFVYRIVRK 355 >gi|157165310|ref|YP_001466458.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Campylobacter concisus 13826] gi|112801662|gb|EAT99006.1| permease YjgP/YjgQ [Campylobacter concisus 13826] Length = 354 Score = 58.5 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 57/364 (15%), Positives = 107/364 (29%), Gaps = 14/364 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y+ +SFL+ L + I +L + + S N+ L G + Sbjct: 1 MKLYARYVGWVYIKSFLIVFLALELFYVGIDLLTNLKDL---PPSANLQLLYVGLTALSA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P + +M R+ EL+ G S+ LI P +A ++IF Sbjct: 58 ISYVLPLSLIFALIILHVNMVRSNELISFYALGISKNKLILPPFLIAFFVTIFYVGLNFT 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 FS + F + + + + I D Sbjct: 118 PFAYA----HDYQKSIAKNTAFSKSTNDSFLKFEGKFIYIKELNSAKQRANDVRIFDING 173 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 T +A + + + ++ + K KS L + Sbjct: 174 TDLLSTTFADHAKFKDNEWVLEDVNQTFLPQNLELGENGFSKVKSENLDALRGFKPKSIE 233 Query: 241 KANDQNLSFLLNPNPNNPNYRPEL----LETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 A S P+ N + L++ R+ F+ F LI Sbjct: 234 SAASVENSKFNIPDAINFIKTFKNEGIGLDSARTAFYNLAITPFFAPFLLLI---FYYHL 290 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + + + V WG +I+ K Q +P + + + I + Sbjct: 291 PVTGRFFNLALSTFIFVVITLVVWGLLFILTKFAQTSVILPEIGMVVPVILLFAYAIYLI 350 Query: 357 KYTK 360 K + Sbjct: 351 KSHR 354 >gi|170729351|ref|YP_001774784.1| hypothetical protein Xfasm12_0115 [Xylella fastidiosa M12] gi|167964144|gb|ACA11154.1| conserved hypothetical protein [Xylella fastidiosa M12] Length = 361 Score = 58.5 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 36/256 (14%), Positives = 93/256 (36%), Gaps = 5/256 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L +SF+ + + ++ + ++ + ++ +LL G + Sbjct: 1 MPKLDRYLLSDFTQSFIATLIVLMLVGVGGVLVDILGSIADGHFPAKLLLSQLGLRFISY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP++ P + L + R++E+ +I + G ++ +L L + + + + + Sbjct: 61 LPLLLPLALMLGLLLSLGRLYRDSEMAVITSIGVGPGRMLPSILGLVLPVVVLIGVCSLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P T L +A ++ + LE F + D + +S + + T + S+ Sbjct: 121 LAPWANRTANDLLEQANRSIIMAGLEAGTFTPMPDGGVVYLSSLSSDGTKLNAVFMQSQK 180 Query: 181 TQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISK--DISIMKFKSYTLQTESANS 235 + A+ G + + + L DG+ + ++ F + Sbjct: 181 DDRIAVVTAKRGEMYVQGDKGRYLRLEDGQRVDGPADGAALNYRVLTFARNDALLPELSV 240 Query: 236 STIVLKANDQNLSFLL 251 + L+ Sbjct: 241 VYDSNHPDILPTFNLI 256 >gi|254882243|ref|ZP_05254953.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|319643195|ref|ZP_07997823.1| hypothetical protein HMPREF9011_03424 [Bacteroides sp. 3_1_40A] gi|254835036|gb|EET15345.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|317385099|gb|EFV66050.1| hypothetical protein HMPREF9011_03424 [Bacteroides sp. 3_1_40A] Length = 632 Score = 58.5 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 31/215 (14%), Positives = 79/215 (36%), Gaps = 6/215 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +++IL+ F+ + +FI + + + ++ + +++L + Y T++ Sbjct: 5 KKLDIFILKSFLMLFIGTFFICLFIFMMQFLWRYVDELVGKGLEMSVLAQFFFYSALTLI 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P+ P + + ELL + G + +I+P++ L F +N+I Sbjct: 65 PLSLPLAILLAALMTFGNFGERYELLSMKAAGIPLLRIIRPLIIFCTFLCCTSFYFQNVI 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 PK + + L + + E +F+ + I + + + + ++ + Sbjct: 125 APKAQIKLLTLLVSMKQTSPELDIPEGVFYDEIEGYNIYVKQKDRETGMLKDVLIYNFSD 184 Query: 182 QTHKIYYAQ------SGSIDLDRQAIILNDGEVHR 210 + + D + L +GE Sbjct: 185 GFENAHIIWASEGKMEMTADKQHLYLHLYNGEQFE 219 Score = 42.7 bits (98), Expect = 0.091, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 38/95 (40%), Gaps = 4/95 (4%) Query: 263 ELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGF 322 + + +++HK++T L +IF I A A++R+ P+ +S+ I + Sbjct: 362 NNIRKHEADWHKKITLSLSCLIFFFIG---APLGAIIRKGGLGMPVVVSVLIFVIYYIID 418 Query: 323 SYIIHKIEQN-PYYIPILYLFLFCISSIFLLMIKK 356 S + + +++ ++ I K Sbjct: 419 SGATRVAKSGEMNMVLGVWMSTIVLAPIGAFFTYK 453 >gi|150002748|ref|YP_001297492.1| hypothetical protein BVU_0142 [Bacteroides vulgatus ATCC 8482] gi|149931172|gb|ABR37870.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482] Length = 632 Score = 58.5 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 31/215 (14%), Positives = 79/215 (36%), Gaps = 6/215 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +++IL+ F+ + +FI + + + ++ + +++L + Y T++ Sbjct: 5 KKLDIFILKSFLMLFIGTFFICLFIFMMQFLWRYVDELVGKGLEMSVLAQFFFYSALTLI 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P+ P + + ELL + G + +I+P++ L F +N+I Sbjct: 65 PLSLPLAILLAALMTFGNFGERYELLSMKAAGIPLLRIIRPLIIFCTFLCCTSFYFQNVI 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 PK + + L + + E +F+ + I + + + + ++ + Sbjct: 125 APKAQIKLLTLLVSMKQTSPELDIPEGVFYDEIEGYNIYVKQKDRETGMLKDVLIYNFSD 184 Query: 182 QTHKIYYAQ------SGSIDLDRQAIILNDGEVHR 210 + + D + L +GE Sbjct: 185 GFENAHIIWASEGKMEMTADKQHLYLHLYNGEQFE 219 Score = 42.7 bits (98), Expect = 0.091, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 38/95 (40%), Gaps = 4/95 (4%) Query: 263 ELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGF 322 + + +++HK++T L +IF I A A++R+ P+ +S+ I + Sbjct: 362 NNIRKHEADWHKKITLSLSCLIFFFIG---APLGAIIRKGGLGMPVVVSVLIFVIYYIID 418 Query: 323 SYIIHKIEQN-PYYIPILYLFLFCISSIFLLMIKK 356 S + + +++ ++ I K Sbjct: 419 SGATRVAKSGEMNMVLGVWMSTIVLAPIGAFFTYK 453 >gi|189501480|ref|YP_001957197.1| permease YjgP/YjgQ family protein [Candidatus Amoebophilus asiaticus 5a2] gi|189496921|gb|ACE05468.1| permease YjgP/YjgQ family protein [Candidatus Amoebophilus asiaticus 5a2] Length = 527 Score = 58.5 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 36/187 (19%), Positives = 72/187 (38%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + +L + F++ VFI + L + + + +++ Y Sbjct: 5 KRTDKIVLTPFIKLFILVLSVTVFIMLMQFFLIYFDELIGKDLGFWVYVQLFCYFGINAT 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PM P + + V S+ EL + + G I +++P+LFL LLSIF++ S I Sbjct: 65 PMAFPLATLVSSLMVFGSLGEQLELTALKSAGIPFIRILRPLLFLVTLLSIFVYFSNGYI 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 PK L + ++E +F+ D I++ + P+ ++ Sbjct: 125 VPKVTVKAHTLLYDLRKKKPSIAIKEGVFYNGIPDYSIRVERKLPDQKTLEDIVIYDHTK 184 Query: 182 QTHKIYY 188 ++ Sbjct: 185 NKGNVHM 191 Score = 43.4 bits (100), Expect = 0.059, Method: Composition-based stats. Identities = 19/128 (14%), Positives = 44/128 (34%), Gaps = 6/128 (4%) Query: 231 ESANSSTIVLKANDQ--NLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 + S I+ KA +Q L + + P N L+ ++ E +KR + + ++ LI Sbjct: 373 NNPKRSQIIQKALEQVKELRYKIQPYTNKITSVDRKLKEFQIEKNKRTSYAIGCILMLLI 432 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFLFCIS 347 +++ P+ IS + + + + I + + Sbjct: 433 GASLGAL---IKKGGFGIPLLISTVFILLYYMVDIFGTKWAKVDIIDTISGAWAPNIVLL 489 Query: 348 SIFLLMIK 355 L ++ Sbjct: 490 PFGLFFLR 497 >gi|294776418|ref|ZP_06741896.1| putative membrane protein [Bacteroides vulgatus PC510] gi|294449744|gb|EFG18266.1| putative membrane protein [Bacteroides vulgatus PC510] Length = 640 Score = 58.5 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 31/215 (14%), Positives = 79/215 (36%), Gaps = 6/215 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +++IL+ F+ + +FI + + + ++ + +++L + Y T++ Sbjct: 13 KKLDIFILKSFLMLFIGTFFICLFIFMMQFLWRYVDELVGKGLEMSVLAQFFFYSALTLI 72 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P+ P + + ELL + G + +I+P++ L F +N+I Sbjct: 73 PLSLPLAILLAALMTFGNFGERYELLSMKAAGIPLLRIIRPLIIFCTFLCCTSFYFQNVI 132 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 PK + + L + + E +F+ + I + + + + ++ + Sbjct: 133 APKAQIKLLTLLVSMKQTSPELDIPEGVFYDEIEGYNIYVKQKDRETGMLKDVLIYNFSD 192 Query: 182 QTHKIYYAQ------SGSIDLDRQAIILNDGEVHR 210 + + D + L +GE Sbjct: 193 GFENAHIIWASEGKMEMTADKQHLYLHLYNGEQFE 227 Score = 42.7 bits (98), Expect = 0.095, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 38/95 (40%), Gaps = 4/95 (4%) Query: 263 ELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGF 322 + + +++HK++T L +IF I A A++R+ P+ +S+ I + Sbjct: 370 NNIRKHEADWHKKITLSLSCLIFFFIG---APLGAIIRKGGLGMPVVVSVLIFVIYYIID 426 Query: 323 SYIIHKIEQN-PYYIPILYLFLFCISSIFLLMIKK 356 S + + +++ ++ I K Sbjct: 427 SGATRVAKSGEMNMVLGVWMSTIVLAPIGAFFTYK 461 >gi|303235938|ref|ZP_07322541.1| permease, YjgP/YjgQ family [Prevotella disiens FB035-09AN] gi|302483811|gb|EFL46803.1| permease, YjgP/YjgQ family [Prevotella disiens FB035-09AN] Length = 650 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 31/223 (13%), Positives = 84/223 (37%), Gaps = 2/223 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +++I + G F + + + + + + + ++ + S+++L + GYL + Sbjct: 20 KKLDIFIAKQFGMLFAGTFVISMVVLMMQSLWKYVDKLVGKGLSIDVLAEFFGYLGLMFV 79 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P P + + ++ ++EL I +G S + + ++ + ++I F +N I Sbjct: 80 PQALPLAILLSSLITFGNLGESSELTAIKASGISLVKSFRGLIVIISFITIGSFYFQNTI 139 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN--PNNTLQGIFIVDSR 179 P + I Q+ + + E +F+ + + + N + + + Sbjct: 140 APDAQKHIFQMILSMKQKSPELEIPEGIFYNGIPQTNLYVERKNLETGHLYNIMIYRMTD 199 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK 222 + I A SG + + L + + + + Sbjct: 200 SYEDQAIILADSGMLQSTAEKKHLVLNLWNGEWFENMRSQELS 242 >gi|15836744|ref|NP_297432.1| hypothetical protein XF0139 [Xylella fastidiosa 9a5c] gi|9104925|gb|AAF82952.1|AE003867_6 conserved hypothetical protein [Xylella fastidiosa 9a5c] Length = 361 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 36/256 (14%), Positives = 94/256 (36%), Gaps = 5/256 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L +SF+ + + ++ + ++ + ++ +LL G + Sbjct: 1 MPKLDRYLLSDFTQSFIATLIVLMLVGVGGVLVDILGSIADGHFPAKLLLSQLGLRFISY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP++ P + L + R++E+ +I + G ++ +L L + + + + + Sbjct: 61 LPLLLPLALMLGLLLSLGRLYRDSEMAVITSIGVGPGRMLPSILGLVLPVVVLIGVCSLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P T L +A ++ + LE F + D + +S + + T + S+ Sbjct: 121 LAPWANRTANDLLEQANRSIIMAGLEAGTFTPMPDGGVVYLSSLSSDGTKLNAVFMQSQK 180 Query: 181 TQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISK--DISIMKFKSYTLQTESANS 235 + A+ G + + + L DG+ + ++ F + + Sbjct: 181 DGRIAVVTAKRGEMYVQGDKGRYLRLEDGQRVDGPADGAALNYRVLTFARNDALLPALSV 240 Query: 236 STIVLKANDQNLSFLL 251 + L+ Sbjct: 241 VYDSNHPDILPTFNLI 256 >gi|329964131|ref|ZP_08301297.1| permease, YjgP/YjgQ family [Bacteroides fluxus YIT 12057] gi|328525651|gb|EGF52680.1| permease, YjgP/YjgQ family [Bacteroides fluxus YIT 12057] Length = 633 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 29/205 (14%), Positives = 81/205 (39%), Gaps = 2/205 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +++IL+ F+ + +FI + + + ++ + + +L + Y +++ Sbjct: 5 KKLDIFILKSFCMLFMGTFFICLFIFMMQFLWRYVDEMVGKGLEMTVLAQFFFYSALSLV 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P P + + ELL + G S + +++P++ + + F +N+I Sbjct: 65 PASLPLAILLAALITFGNFGERFELLAMKAAGISLLKIMRPLIIFICFICLVSFYFQNVI 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ ++ + L + + E +F+ D + + + + ++ + + Sbjct: 125 GPQAQTKLWTLLLSMKQKSPEVDIPEGVFYDEIDGYNLYVKHKDRKTGMLYDVLIYNFEK 184 Query: 182 Q--THKIYYAQSGSIDLDRQAIILN 204 +I A SG +++ L Sbjct: 185 GFENAQIIKADSGRLEMTADKQHLY 209 Score = 39.2 bits (89), Expect = 0.91, Method: Composition-based stats. Identities = 17/108 (15%), Positives = 48/108 (44%), Gaps = 6/108 (5%) Query: 251 LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFI 310 + + + L + + +H++LT L +IF I A ++R+ P+ + Sbjct: 352 WSFKSYSISQTDTSLRRHMTSWHEKLTLSLACLIFFFIG---APLGGIIRKGGLGMPVVV 408 Query: 311 SLSISFGVFWGFSYIIHKIEQNPYYIPILYLF--LFCISSIFLLMIKK 356 S+ + F V++ + +K+ ++ +I + ++ ++ + + K Sbjct: 409 SV-LIFIVYYIINNTGYKMARDGKWIVWMGMWTSTAILAPLGAFLTYK 455 >gi|189464158|ref|ZP_03012943.1| hypothetical protein BACINT_00494 [Bacteroides intestinalis DSM 17393] gi|189437948|gb|EDV06933.1| hypothetical protein BACINT_00494 [Bacteroides intestinalis DSM 17393] Length = 632 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 32/205 (15%), Positives = 82/205 (40%), Gaps = 2/205 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +++IL+ F+ + +FI + + + ++ + +++L + Y T++ Sbjct: 5 KKLDIFILKSFCTLFMGTFFICLFIFMMQFLWKYVDEMVGKGLEMSVLAQFFFYSALTLV 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P P + + ELL + G S + +++P++ I + F +N+I Sbjct: 65 PASLPLAILLAALITFGNFGERFELLAMKAAGISLLKIMRPLIVFIIFICGVSFYFQNVI 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 PK ++ + L + + E +F+ D + + N + ++ + + Sbjct: 125 GPKAQTKLWTLLISMKQKSPELDIPEGVFYDEIDGYNLYVKHKNRKTGMLYDVLIYNFEK 184 Query: 182 Q--THKIYYAQSGSIDLDRQAIILN 204 +I + SG +++ L Sbjct: 185 GFENAQIIKSDSGRLEMTADKQHLY 209 >gi|89898056|ref|YP_515166.1| hypothetical protein CF0249 [Chlamydophila felis Fe/C-56] gi|89331428|dbj|BAE81021.1| conserved hypothetical protein [Chlamydophila felis Fe/C-56] Length = 357 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 40/362 (11%), Positives = 116/362 (32%), Gaps = 16/362 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M ++ ++ L ++ I+ + + + ++ ++ +L+++ Y IP + Sbjct: 1 MPILWKVLIFRYLKTITFCTLSLICISIISSLQEIVSYIA-KDVPYPTVLRLTAYQIPYL 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP + P + + ++ N ++ + +G S +I P L ++ + F + + Sbjct: 60 LPFILPISCFISAFTLFRGLSDNNQITFLKASGASHGIIIFPALMVSCAICCINFYTCSE 119 Query: 121 IEPKCRSTIKQLSAKAQLALTF---SYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD 177 + CR + A + L++ R+ + N + + Sbjct: 120 LASICRFQTCKEIANMAMTSPTLLLQTLQKKENNRIFITVDHCAKSKFDNVIIALKRDQE 179 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI-SKDISIMKFKSYTLQTESANSS 236 + K + + + +++ + S + +S +S Sbjct: 180 IANVGIIKTIIPDVANDTVQAKNVVMISKLPSTLTDQHSSNSQEYYIESLNEMLIPKITS 239 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 T+ + P + + E +R+ L + +V + Sbjct: 240 TLFAGKSYMKTRTDYLPWKQ--LVKQSFSHAHLPETLRRIGIGLLCITLTYSGMVLGTYK 297 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R+ ++ +F + + + + P L LF+ +++ + Sbjct: 298 PRFRKPIILYCVFPVMDLILLI---------VGKNTNSLFPALMLFIVPQVISWIVFAIR 348 Query: 357 KY 358 Y Sbjct: 349 AY 350 >gi|288800724|ref|ZP_06406181.1| putative permease [Prevotella sp. oral taxon 299 str. F0039] gi|288332185|gb|EFC70666.1| putative permease [Prevotella sp. oral taxon 299 str. F0039] Length = 636 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 31/223 (13%), Positives = 81/223 (36%), Gaps = 2/223 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +++I++ G F+ + F+ + + + I+ + ++++L + Y+ ++ Sbjct: 5 KKLDIFIVKQFGLLFIGTFFICQFVLMMQFLWRYIDDLIGKGLTIDVLAQFFWYMGLMLV 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P P + + ++ ++EL I G S + + ++ + IL++ F +N I Sbjct: 65 PQALPLAILLSSLIAYGNLGESSELTAIKAAGISLMQSCRGLIVITILIAFSSFYFQNNI 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN--NTLQGIFIVDSR 179 P + QL + + + +F+ + I + K + + + Sbjct: 125 GPTANLKLAQLILSMRDKSPETQIPVGVFYDGIPNSNIYVQKKDNETGKLYGIMIYRMTG 184 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK 222 + I A SG + L + + Sbjct: 185 SYEDQAIILADSGMLQSTADRKHLLLSLWSGEWFENMQSQEFT 227 >gi|284799560|ref|ZP_06390217.1| permease, YjgP/YjgQ family [Neisseria subflava NJ9703] gi|284797388|gb|EFC52735.1| permease, YjgP/YjgQ family [Neisseria subflava NJ9703] Length = 181 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 18/128 (14%), Positives = 45/128 (35%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +I+ + + + + L + +P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEIINEVGDLGKGSYNGAKLGQYVLMQMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + +EL +I +G S L+ + ++ +I Sbjct: 61 AYELMPLAVLIGGLISLSQLASGSELTVIKASGMSTKKLLLILSQFGLIFAIATVALGEW 120 Query: 121 IEPKCRST 128 + P Sbjct: 121 VAPTLSQK 128 >gi|224536882|ref|ZP_03677421.1| hypothetical protein BACCELL_01758 [Bacteroides cellulosilyticus DSM 14838] gi|224521506|gb|EEF90611.1| hypothetical protein BACCELL_01758 [Bacteroides cellulosilyticus DSM 14838] Length = 632 Score = 58.1 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 35/230 (15%), Positives = 89/230 (38%), Gaps = 2/230 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +++IL+ F+ + +FI + + + ++ + +++L + Y T++ Sbjct: 5 KKLDIFILKSFCTLFMGTFFICLFIFMMQFLWKYVDEMVGKGLEMSVLAQFFFYSALTLV 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P P + + ELL + G S + +++P++ IL+ F +N+I Sbjct: 65 PASLPLAILLAALITFGNFGERFELLAMKAAGISLLKIMRPLIVFIILICGVSFYFQNVI 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 PK ++ + L + + E +F+ D + + N + ++ + + Sbjct: 125 GPKAQTKLWTLLISMKQKSPELDIPEGVFYDEIDGYNLYVKHKNRKTGMLYDVLIYNFEK 184 Query: 182 Q--THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ 229 +I + SG +++ L + + M K+ + Sbjct: 185 GFENAQIIKSDSGRLEMTADKQHLYLHLYSGEQFENLKSQNMNQKNVPYR 234 >gi|242310520|ref|ZP_04809675.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] gi|239522918|gb|EEQ62784.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] Length = 341 Score = 57.7 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 56/356 (15%), Positives = 123/356 (34%), Gaps = 16/356 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y+ + F + L + FIA V+ ++ + S LL + Y +P +L Sbjct: 2 RIKNYLFHSFSQIFFPTFLVLFFIASVVIFIRIAGVTFVVQISFLELLSLYFYTLPLMLF 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 V P F + L+ ++ + EL ++ G S +IK +A+L SI LFI I+ Sbjct: 62 FVIPLSFFVACALSLSRLSFDYELPVLFALGMSPNKIIKIFFPIALLASISLFILSLILT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +Q + + ++ + +L + L + + IV + Sbjct: 122 PLSDLAYRQFLEERKNSININLQAGEFGQKLGNWLVYV---KENHEDMSYKDIVLLSFGK 178 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + +A+ I + P I + FK+ L+ + S L Sbjct: 179 EGGLIFAKDAKIINKDGVMEAILDNGKIYRPDENAIEKIAFKTLILRNSITDISGQNLGV 238 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + + R L+ ++ +F +S+ + R Sbjct: 239 FEYWNRAFYENDRQRKTLRD-------------LSMYVLMSLFPFVSLYFFPLLGVKNPR 285 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + + + + GVF+ +Y++ + + ++ + +++ Y Sbjct: 286 YQRNHTILQSMLIIGVFYALTYLVANYLPLIGMVLLPIVWGLAGYFGYQRFVRRYY 341 >gi|212690931|ref|ZP_03299059.1| hypothetical protein BACDOR_00419 [Bacteroides dorei DSM 17855] gi|237712585|ref|ZP_04543066.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|237726895|ref|ZP_04557376.1| conserved hypothetical protein [Bacteroides sp. D4] gi|265752264|ref|ZP_06088057.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|212666163|gb|EEB26735.1| hypothetical protein BACDOR_00419 [Bacteroides dorei DSM 17855] gi|229435421|gb|EEO45498.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] gi|229453906|gb|EEO59627.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|263237056|gb|EEZ22526.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 632 Score = 57.7 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 31/215 (14%), Positives = 79/215 (36%), Gaps = 6/215 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +++IL+ F+ + +FI + + + ++ + +++L + Y T++ Sbjct: 5 KKLDIFILKSFLMLFIGTFFICLFIFMMQFLWRYVDELVGKGLEMSVLAQFFFYSALTLI 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P+ P + + ELL + G + +I+P++ L F +N+I Sbjct: 65 PLSLPLAILLAALMTFGNFGERYELLSMKAAGIPLLRIIRPLIIFCTFLCCTSFYFQNVI 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 PK + + L + + E +F+ + I + + + + ++ + Sbjct: 125 APKAQIKLLTLLVSMKQTSPELDIPEGVFYDEIEGYNIYVKQKDRETGMLKDVLIYNFSD 184 Query: 182 QTHKIYYAQ------SGSIDLDRQAIILNDGEVHR 210 + + D + L +GE Sbjct: 185 GFENAHIIWASEGKMEMTADKQHLYLHLYNGEQFE 219 Score = 42.7 bits (98), Expect = 0.083, Method: Composition-based stats. Identities = 17/132 (12%), Positives = 46/132 (34%), Gaps = 4/132 (3%) Query: 226 YTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIF 285 + + + ++L+ N + + +++HK++T + +IF Sbjct: 325 NSYTLAEKDKTLGSAADRTESLASEWNMKSYQTTDADNNIRKHEADWHKKITLSISCLIF 384 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-PYYIPILYLFLF 344 I A A++R+ P+ +S+ I + S + + +++ Sbjct: 385 FFIG---APLGAIIRKGGLGMPVVVSVLIFVIYYIIDSGATRVAKSGEMNMVLGVWMSTI 441 Query: 345 CISSIFLLMIKK 356 ++ I K Sbjct: 442 VLAPIGAFFTYK 453 >gi|152990851|ref|YP_001356573.1| hypothetical protein NIS_1107 [Nitratiruptor sp. SB155-2] gi|151422712|dbj|BAF70216.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2] Length = 338 Score = 57.7 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 55/358 (15%), Positives = 128/358 (35%), Gaps = 20/358 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y+ + SFL L + IA +I ++ ++L S SL L K+ ++ P + Sbjct: 1 MPKLLRYLGNHLYESFLSYFLPLFGIASLIFFIKIVSLTSIVQLSLVDLAKLYIFITPQI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P F + L ++ + E + + G S +++ + LA+LLS+ LFI + Sbjct: 61 LFFTIPVVFFIAAVTALHKLSFDYETIAFFSLGISPTKIMRYLTLLAVLLSLLLFIIAYM 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P+ + K + + + + + N L ++ + D Sbjct: 121 LIPQGKQLEKGFYRYKKTEANINLKPSEYGHKFGNWFVYV--QKKDKNNLFENVVLYNFD 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + ++ + D + + L + + + + + F L S + + Sbjct: 179 NEQERFITSKKATFDNSQYGLKLTLYDGNAYTYKKGILDQITFTKMDLFDTSTSYYFQYI 238 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 LN +L+ + ++ + A + Sbjct: 239 DPIHYWEKAFLNKQRAFDML-----------------FFLWIALLPVLGMPYAGMIGIHH 281 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 R +F+ + + +++GF++++ K + + L+ F +F I +Y Sbjct: 282 PRYHKGGVFLKVLFALFIYFGFAFLLSKTLYYYSLL-FMALWFFGGIYLFHKTIMSRY 338 >gi|317477113|ref|ZP_07936354.1| hypothetical protein HMPREF1016_03338 [Bacteroides eggerthii 1_2_48FAA] gi|316906656|gb|EFV28369.1| hypothetical protein HMPREF1016_03338 [Bacteroides eggerthii 1_2_48FAA] Length = 635 Score = 57.7 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 36/230 (15%), Positives = 89/230 (38%), Gaps = 2/230 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +++IL+ F+ + +FI + + + ++ + +N+L + Y T++ Sbjct: 5 KKLDIFILKSFCLLFMGTFFICLFIFMMQFLWKYVDEMVGKGLEMNVLAQFFFYSALTLV 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P P + + ELL + G S + +++P++F L+ F +N+I Sbjct: 65 PASLPLAILLAALITFGNFGERFELLAMKAAGISLLKIMRPLIFFISLICCVSFYFQNVI 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 PK ++ + L + + E +F+ D + + N + ++ + + Sbjct: 125 GPKAQTKLWTLLVSMKQKSPEVDIPEGVFYDEIDGYNLYVKHKNRETGMLYDVLIYNFEK 184 Query: 182 Q--THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQ 229 +I + SG +++ L + + M K+ + Sbjct: 185 GFENAQIIKSDSGRLEMTADKQHLYLHLYSGEQFENLKSQNMNQKNVPYR 234 >gi|300728391|ref|ZP_07061753.1| permease, YjgP/YjgQ family [Prevotella bryantii B14] gi|299774310|gb|EFI70940.1| permease, YjgP/YjgQ family [Prevotella bryantii B14] Length = 631 Score = 57.7 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 29/204 (14%), Positives = 77/204 (37%), Gaps = 2/204 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K ++++ + G F + F+ + + + ++ + + L + Y+ ++ Sbjct: 5 KKLDIFLAKQFGLLFAGTFFICQFVLMMQFLWRYVDDLIGKGIPMTALAQFFWYMGLMMV 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P P + + L ++ ++EL I G S + ++ ++ + ++ + F EN + Sbjct: 65 PQALPLAILLSSLITLGNLGESSELTAIKAAGISLLQALRSLIVITCIIMMASFYFENNL 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN--NTLQGIFIVDSR 179 P + QL + + E +F+ + I + K + + ++ Sbjct: 125 GPDANMKLSQLLISMKQKSPELEIPEGVFYDGIPNSNIYVQKKDLKSGKLYGIMIYRMTQ 184 Query: 180 DTQTHKIYYAQSGSIDLDRQAIIL 203 + I A SG + + L Sbjct: 185 SYEDAAIILADSGMMQSTAEKKHL 208 Score = 41.5 bits (95), Expect = 0.22, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 44/127 (34%), Gaps = 6/127 (4%) Query: 228 LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGL 287 L TE + A QN L + + + ++ E + T L +IF Sbjct: 330 LSTEQKQQTVASALAKAQNEMSDLEFKSLLTSDGDKNIRRHKIEMVNKFTVALSCLIFFF 389 Query: 288 ISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI---LYLFLF 344 I A A++R+ P+ IS+ + + + + + I L + Sbjct: 390 IG---APLGAIIRKGGLGVPVIISVLVFIIYYILDNSGFRMAREGIWAIWFGKGLAPGVL 446 Query: 345 CISSIFL 351 +IF+ Sbjct: 447 TPIAIFV 453 >gi|300778309|ref|ZP_07088167.1| permease YjgP/YjgQ family protein [Chryseobacterium gleum ATCC 35910] gi|300503819|gb|EFK34959.1| permease YjgP/YjgQ family protein [Chryseobacterium gleum ATCC 35910] Length = 485 Score = 57.7 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 44/283 (15%), Positives = 92/283 (32%), Gaps = 18/283 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K + YI++ F + FI V I ++ S +LK+ YL V Sbjct: 2 LKILDRYIIKTFFGPFFFIFSVLFFIFIVNIIWVQLGQFMGKGLSYWQILKLLFYLGVNV 61 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + MV P + + EL + G ++ P+L ++ L+I LF N Sbjct: 62 ISMVLPLTILLASIMSFGEFGERYELAAMKAAGIPLTRVMTPLLGISTALAIMLFFFSNN 121 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + K + F +K K I Sbjct: 122 IIPDFQKKAKNMLFNIAQTKPAINFTPGQFIDQIPGYMVKFDK-----------IYGENG 170 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++ + + ++Q+++ G+ + + ++ + + Sbjct: 171 ENIEGVFVHKKANAYENQQSVVAEKGKFVPAANKNYLKLVLYNGYVFEDAFAGKGDNVRQ 230 Query: 241 KANDQNL-------SFLLNPNPNNPNYRPELLETYRSEFHKRL 276 K DQ + F ++ N + ++ + YR + + +L Sbjct: 231 KQPDQAIKFDTLVSHFDISEIINKAIEKEQITDDYRFQTYNQL 273 >gi|285019432|ref|YP_003377143.1| permease [Xanthomonas albilineans GPE PC73] gi|283474650|emb|CBA17149.1| putative yjgp/yjgq family permease protein [Xanthomonas albilineans] Length = 361 Score = 57.7 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 98/256 (38%), Gaps = 5/256 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+LR +SF + + ++ ++ ++ + ++ +L G Sbjct: 1 MPKLDRYLLRDFFQSFSATLIVLLVVSVGGVLVDVLGNIADGRIPAKLLFSQLGLQFVVY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP++ P + L + R++E+ +I G L++P+L L + + + + Sbjct: 61 LPLILPLALMLGLLLALARLYRDSEMAVITAIGVGPRRLLRPILMLVVPVVTLVGLCSLW 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P T QL +A +L + LE F L D + +S + + T V + Sbjct: 121 LGPWADRTSDQLVNEANHSLLMAGLEAGRFTSLPDGSIVYVSTLSGDGTRLSKVFVQRQK 180 Query: 181 TQTHKIYYAQSGSIDLD---RQAIILNDGEVHR--KSPISKDISIMKFKSYTLQTESANS 235 + Q G++ + + + L DG + D +M+F + + ++ Sbjct: 181 DGRLDVVTGQRGAMFFEGKAERYLRLEDGYRFEGPLAGDGLDYRMMRFANNDVALSERSA 240 Query: 236 STIVLKANDQNLSFLL 251 + + L+ Sbjct: 241 ARKDDDPALLTTAALI 256 >gi|282880145|ref|ZP_06288865.1| putative membrane protein [Prevotella timonensis CRIS 5C-B1] gi|281306018|gb|EFA98058.1| putative membrane protein [Prevotella timonensis CRIS 5C-B1] Length = 635 Score = 57.7 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 28/183 (15%), Positives = 70/183 (38%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +++ + G F + F+ + + + ++ + S+ I+ + Y+ ++ Sbjct: 5 KKLDIFTAKQFGLLFAGTFFICQFVLMMQFLWRYVDDLIGKGLSMEIMAQFFWYMGLFLV 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P P + + ++ N+EL I ++G S +P++ L I +S F +N + Sbjct: 65 PQALPLAVLLSSLITFGNLGENSELTAIKSSGISMFRTFQPLISLTIFISFSSFYFQNYV 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 PK + QL + + E +F+ + + + K + ++ Sbjct: 125 GPKANMKLAQLILSMKQKSPELEIPEGIFYDGIPNSNLYVQKKDVETGKLYGIMIYRMTG 184 Query: 182 QTH 184 Sbjct: 185 SYE 187 Score = 38.4 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 22/136 (16%), Positives = 44/136 (32%), Gaps = 12/136 (8%) Query: 221 MKFKSYTLQTESANSSTIVLKANDQNLSFL--LNPNPNNPNYRPELLETYRSEFHKRLTQ 278 F + + + ++ A S + LN + ++L +R E + T Sbjct: 321 FVFDTIYNKLSNDQKINVMNMALSNIQSEISELNFQSMITSDGDKMLREHRIEMIGKFTL 380 Query: 279 WLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY---- 334 L +IF I A A++R+ PI IS+ + + + + Sbjct: 381 ALTCLIFFFIG---APLGAIIRKGGLGFPIIISVLVFIIYYIFENTGYRMARSGIWTVNF 437 Query: 335 ---YIPILYLFLFCIS 347 P + + L Sbjct: 438 GKGLAPAVLIPLAAFV 453 >gi|237756215|ref|ZP_04584779.1| putative membrane protein [Sulfurihydrogenibium yellowstonense SS-5] gi|237691625|gb|EEP60669.1| putative membrane protein [Sulfurihydrogenibium yellowstonense SS-5] Length = 336 Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 52/353 (14%), Positives = 115/353 (32%), Gaps = 23/353 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y+++ ++FL+ I Q+L + + ++ K+ + + Sbjct: 1 MKILDKYLIKLFFKNFLLLIGLFSLIITSSQLLHLPSFA--YSMNIIDFSKLLFLIDISF 58 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + F F + V S+ E+ + + G S+ L+KPV + ++ I F+ + Sbjct: 59 IKYQLLFAFFISWLLVGISLRDKNEIYAVYSAGISKKQLLKPVFIMTVIFVIIAFVFSTV 118 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + + + F +++D++ + + K + + Sbjct: 119 IVPSANRERYKFLTYKVKSYILENVSPKNFSKINDNVSVYVEKK------EKNTFYNILI 172 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 Y + +IL DG + S S D + +++L ++ Sbjct: 173 YNASSGYLITAKEGMFISNNLILKDGYIQLPSGKSFDTIKYEKYTFSLDVSYIKEISMQD 232 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + E S R + + G I + Sbjct: 233 -----------FKTKDLLRLAVEEDSKALSILADRFYFAIPFMFLGFIGF----LSGINT 277 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 R K + ++S+S G Y + IE+ P + + L I + + Sbjct: 278 YRSKETLLTFAVSLSIGYMVLNYYFLKIIEKVPVLFFVYPIVLVAIFYLVYKL 330 >gi|149373007|ref|ZP_01891963.1| hypothetical protein SCB49_11577 [unidentified eubacterium SCB49] gi|149354367|gb|EDM42934.1| hypothetical protein SCB49_11577 [unidentified eubacterium SCB49] Length = 515 Score = 57.3 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 44/275 (16%), Positives = 97/275 (35%), Gaps = 23/275 (8%) Query: 24 VFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRN 83 +FI + I I+ ++ ++I+LK + P ++ +V P + + V Sbjct: 1 MFIFILQGIWLYISELAGKDLDISIVLKFLWFYSPRIVTLVLPLSILVTSLMVFGGFAER 60 Query: 84 TELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFS 143 E + +TG S ++ + +LL I F N + P + L Q Sbjct: 61 YEFAAMKSTGISLQRAMRSLSVFILLLGITAFFFSNNVIPYSEYKWQNLRRNIQQFKPSM 120 Query: 144 YLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT-----QTHKIYYAQSGSIDLDR 198 + F ++ D+L IK+++ + N ++ R + A+ G + + Sbjct: 121 VIAAGQFNQIGDELNIKVAEKSGENGEFLEGVIIHRKDMKKPSNNLIVTIAEKGELTSEE 180 Query: 199 QAI----ILNDGEVHRKSPISKDISIMK-------FKSYTLQTESA-------NSSTIVL 240 + IL +G +++ + F+ YT+ + + + Sbjct: 181 GSNTLSLILKNGYDYQELIEKDYKKQHREPYVKTYFEEYTINIDLTALNAKDVDQENNIS 240 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKR 275 N N+ L + + + LE + + R Sbjct: 241 NQNMYNIGELATEIDSLSDAYSKNLEQFAENMYHR 275 Score = 48.8 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 11/105 (10%), Positives = 36/105 (34%), Gaps = 4/105 (3%) Query: 253 PNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISL 312 + R L Y H+++ +I I A A++R+ P+ +++ Sbjct: 327 AKKEDSKNRVRKLNKYEIALHEKIVLGFACIILFFIG---APLGAIIRKGGMGLPMVVAV 383 Query: 313 SISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFLLMIKK 356 + + + + E + + ++ + + + + + Sbjct: 384 VLFLTYHFIGIFAKNSAEDGSIHPFLGTWISTLIMLPLSIWLTYR 428 >gi|15834847|ref|NP_296606.1| hypothetical protein TC0227 [Chlamydia muridarum Nigg] gi|270285013|ref|ZP_06194407.1| hypothetical protein CmurN_01133 [Chlamydia muridarum Nigg] gi|270289036|ref|ZP_06195338.1| hypothetical protein CmurW_01188 [Chlamydia muridarum Weiss] gi|301336411|ref|ZP_07224613.1| hypothetical protein CmurM_01210 [Chlamydia muridarum MopnTet14] gi|7190266|gb|AAF39099.1| conserved hypothetical protein [Chlamydia muridarum Nigg] Length = 354 Score = 57.3 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 40/360 (11%), Positives = 116/360 (32%), Gaps = 15/360 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M ++ ++ + L ++ I+ + + + ++ ++ + +++ Y IP + Sbjct: 1 MPILWKVLIFRYLKTTVFCTLSLICISIISSLQEIVSYIA-KDVPYATVFRVTAYQIPYL 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP + P + + ++ N ++ + +G S+ +I P+L + +L F F + + Sbjct: 60 LPFILPASCFISAFTLFRKLSDNNQITFLKASGASQGMIIFPILITSGILCCFNFYTCSE 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKI---SKYNPNNTLQGIFIVD 177 + CR + A + L+ D N + + Sbjct: 120 LASICRFQTGKEIANIAMTSPALLLQTLQKKENDRIFIAIDHCGKSKFDNVIIALKHNQE 179 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + + + +++ + + + ++ ++T Sbjct: 180 ISNIGFVETIIPDVNKDSVQAKNVLVISKVPLFSEARTSNPNEFYLETLDELFIPKITAT 239 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + P + + + +E +R+ L + + Sbjct: 240 LFAGKSYMKARTDYLPWKQLI----QDVHLHLAEILRRVAIGLLCSTMTFSGLALGTYKP 295 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 R+ + + + F V I+ K +P +L+LF +S + K Sbjct: 296 RFRK-------PVLIYVLFPVLNLIFLIVGKNTTHPISALMLFLFPQLLSWLIFSWRIYK 348 >gi|312885912|ref|ZP_07745544.1| permease YjgP/YjgQ family protein [Mucilaginibacter paludis DSM 18603] gi|311301719|gb|EFQ78756.1| permease YjgP/YjgQ family protein [Mucilaginibacter paludis DSM 18603] Length = 463 Score = 56.9 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 53/114 (46%), Gaps = 6/114 (5%) Query: 245 QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKK 304 ++L ++ P + ++L Y E+ K+ T ++ LI A A++R+ Sbjct: 327 RSLKDIVKPKGDTYIENDKILRRYLIEYQKKFTLSAACLVLFLIG---APLGAIIRKGGL 383 Query: 305 IHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMIKK 356 P+ IS+ F +++ S I K ++ P+L ++ +F ++ I L + K Sbjct: 384 GLPVVISVVF-FLIYYIISTIGEKSAKDGNISPVLGTWVAIFVLAPIGLFLSYK 436 Score = 51.5 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 66/163 (40%) Query: 24 VFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRN 83 +F+ ++ + + I+ + +L++ Y T + M P + + ++ N Sbjct: 1 MFVLLMLFLWKYIDDLIGKGFEWYTILELMMYASATNVAMALPLSVLLSSIMTYGTLGEN 60 Query: 84 TELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFS 143 EL+ I + G S + P++ + LS+ F + + P L A+ + S Sbjct: 61 YELVAIKSAGISLSRALYPMVIVVAALSVAAFAFSDYMLPVANLKFYSLLYDARKQKSAS 120 Query: 144 YLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 ++E +F +++ K +P+ L ++ R + + Sbjct: 121 LIKEGVFNNSFPGYSVRVQKKDPDGQLLHGVMIYERAGGSTSM 163 >gi|257461390|ref|ZP_05626486.1| ribonuclease PH [Campylobacter gracilis RM3268] gi|257441113|gb|EEV16260.1| ribonuclease PH [Campylobacter gracilis RM3268] Length = 343 Score = 56.9 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 51/326 (15%), Positives = 105/326 (32%), Gaps = 16/326 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+ SF + I ++ LQ + S + + L+K+ +++P + Sbjct: 1 MDRVQRYLFSNFVGSFASLFSTLFIIMSIVFFLQIARITSFIEINFSELVKLYLFMLPRI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P F + + L +++ E ++I G + ++ A L S+ L Sbjct: 61 LIFTVPIAFFVALSISLFRLSKENETIVIFTIGYATRKIVLFFGISAALCSLALLFVSLF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + +++ T + + D L S+ N + +V Sbjct: 121 MMPIAENLKDNFIDYKKISATLNIKSNEFGQKFSDWLVFIDSQENNGTSTLYKDLVLYNP 180 Query: 181 TQTH---KIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + ++ A+SG + + + + + +F+S TL+T+S + Sbjct: 181 GGSQDHERMIVARSGEFKNENASFSAMLHDGKIYTMGGDQWHVSEFESLTLRTQSDRNIR 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 E R EF LFP+ L ++ Sbjct: 241 GGGGVIGYWS-------------EMGGSEKRRKEFSIYTLVSLFPLASFLFALSLGIVTY 287 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFS 323 + IF L F + S Sbjct: 288 RYEKGFVYAGIFGVLFSYFALIMLLS 313 >gi|323344722|ref|ZP_08084946.1| hypothetical protein HMPREF0663_11482 [Prevotella oralis ATCC 33269] gi|323093992|gb|EFZ36569.1| hypothetical protein HMPREF0663_11482 [Prevotella oralis ATCC 33269] Length = 633 Score = 56.9 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 32/209 (15%), Positives = 78/209 (37%), Gaps = 2/209 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +++I + G F+ + F+ + + + I+ + S+ ++ + Y ++ Sbjct: 5 KKLDIFIAKQFGLLFIGTFFICQFVLMMQFLWKSIDELVGKGLSMEVMAQFFWYAGLMLV 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P P + + ++ ++EL I G S I + ++ ++I++S F +N + Sbjct: 65 PQALPLAILLSSLIAFGNLGESSELTAIKAAGISLIQAFRSLIIISIIISFSSFYFQNYV 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPN--NTLQGIFIVDSR 179 P I QL + + E +F+ + + + K + + + Sbjct: 125 GPTANMKIAQLWISMKQKSPELAIPEGIFYDGIPNSNLYVQKKDMETGKLYGIMIYRMTG 184 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEV 208 + I A SG + + L Sbjct: 185 SYEDQAIILADSGMLQSTAEKKHLVLTLW 213 Score = 38.1 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 35/100 (35%), Gaps = 7/100 (7%) Query: 261 RPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFW 320 +L+ +R E + T L +IF I A A++R+ P+ IS+ + + Sbjct: 363 GDKLIREHRIEMISKFTLALSCLIFFFIG---APLGAIIRKGGLGVPVIISVLVFIVYYI 419 Query: 321 GFSYIIHKIEQNPYYI----PILYLFLFCISSIFLLMIKK 356 + + I + L +++ K Sbjct: 420 LDNTGYRMARGGMWTIEFGKGLAPAVLIPLAAFVTYKANK 459 >gi|317014475|gb|ADU81911.1| hypothetical protein HPGAM_05615 [Helicobacter pylori Gambia94/24] Length = 345 Score = 56.9 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 120/352 (34%), Gaps = 11/352 (3%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y+ + + F L + FI+ ++ ++ ++ S L+++ Y +P + + P Sbjct: 5 YLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFILP 64 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 F L+ ++ + ELL+ + G S T+ K + L++L+S L + I+ P + Sbjct: 65 ITFFAACALGLSRLSYDHELLVFFSLGVSPKTMTKAFVPLSLLVSAILLVFSLILIPTSK 124 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 S + + + + +L D L NN+ + + ++ Sbjct: 125 SAYYGFLRQKKDKIDINIRAGEFGQKLGDWLVYV--DKTENNSYDNLVLFSNKSLSQESF 182 Query: 187 YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 AQ G+I+ LN H + + F+ L+ + + ++ Sbjct: 183 ILAQKGNINNQNGVFELNLYNGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYLQGT 242 Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 N + + LFP+ + + + Sbjct: 243 DYLGYWKKAFGKNANKNQKRRFSQA----ILVSLFPLASVFLIPLFGIANPRFKTNWSYF 298 Query: 307 PIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + ++ + F + S + + +++ F +F I K+Y Sbjct: 299 YVLGAVGVYFLMVHVISTDLFLMT-----FFFPFIWAFASYLLFRKFIVKRY 345 >gi|332976302|gb|EGK13159.1| permease YjgP/YjgQ [Psychrobacter sp. 1501(2011)] Length = 467 Score = 56.9 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 82/214 (38%), Gaps = 1/214 (0%) Query: 31 QILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIID 90 ++++ + + + +L I GY +P L +V P F + V + + E+ +++ Sbjct: 24 RMIRYFGIAAEGRLDVGLLFAIIGYNLPYFLELVLPLSFFIGLMLVFGRLYVDQEMAVLN 83 Query: 91 NTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLF 150 +G SR L + ++ +LL +F +P + + + L+ F + F Sbjct: 84 GSGISRGRLARLMIPFILLLFVFEAGLSLYGKPWGVRNSENIWQQQSLSSAFDLIRPQTF 143 Query: 151 FRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHR 210 D D ++ + N + T I+ Q ++ D+Q+ + + + Sbjct: 144 ISSD-DYHLYVGSMNDDRTELQDVILVQTADQGITGAKPDLTNLGADQQSQDSVNTDTAQ 202 Query: 211 KSPISKDISIMKFKSYTLQTESANSSTIVLKAND 244 +K + T+ + +T +A + Sbjct: 203 VDEQAKKPELSPKADKTITELTKPVATSSTEAQE 236 Score = 48.8 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 18/182 (9%), Positives = 50/182 (27%), Gaps = 23/182 (12%) Query: 192 GSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLL 251 GS D + L G + S + + F+ Y + I +L Sbjct: 257 GSDTGDTTQLDLFQGRRYEVGADSLVYNQVSFERYRISINQPPKDIITDDNVATQTLPVL 316 Query: 252 NPNP--------------------NNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 + + ++E RLT ++ ++++ Sbjct: 317 WQAATGQAAPVIDLSVDPTKASPVKTQKPDAQQVIAAQAELGYRLTLPWLIILAPMLAVP 376 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 A + ++ + + ++ I + + + + + L + + L Sbjct: 377 LA---QVRPRQGRWLRLLPAIIIYASCALVIISLKNSVTKGSVSVLSYPLTIIGFMVLAL 433 Query: 352 LM 353 + Sbjct: 434 YL 435 >gi|71064626|ref|YP_263353.1| hypothetical protein Psyc_0045 [Psychrobacter arcticus 273-4] gi|71037611|gb|AAZ17919.1| conserved hypothetical protein [Psychrobacter arcticus 273-4] Length = 416 Score = 56.9 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 26/168 (15%), Positives = 64/168 (38%) Query: 26 IAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTE 85 + ++++ + + +++L I GY +P L ++ P F + V + + E Sbjct: 1 MMLGGRLIRYFGIAAEGNLDISLLFTIIGYNLPYFLELILPLAFFIALMLVFGRLYVDQE 60 Query: 86 LLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYL 145 + +I+ +G SR L + + L + L + + +P + + + + L F + Sbjct: 61 MAVINASGISRGRLGRLMTPLILALFVGEAALSIVGKPWGVRSSENVWQQQALTSAFDLI 120 Query: 146 EENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGS 193 N F + S + LQ + ++ S + + Sbjct: 121 RPNQFISSGNYHLYVGSLSDDKKQLQDVILIQSEPEKKGSAVKNNTAK 168 Score = 56.5 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 21/155 (13%), Positives = 47/155 (30%), Gaps = 6/155 (3%) Query: 203 LNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAND-QNLSFLLNPNPNNPNYR 261 L G + S + + F Y + ++ I + Q + L N Sbjct: 232 LFQGRRYEVGAGSLKYNQVGFDRYRITLTESSKEVITEDNIETQAIGPLWQAATGNAQVG 291 Query: 262 PELLETYRS-EFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFW 320 E RL+ +I ++++ A + ++ + +F S+ + Sbjct: 292 SNNAMRAAQGELGYRLSLPWLMIIAPMLAVPLA---QVRPRQGRWLRLFPSILLFVSCVL 348 Query: 321 GFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 G + + + + Y +L L I Sbjct: 349 GIISLKNAVGK-GSVSVWAYAWLILGFMALALYIN 382 >gi|332290859|ref|YP_004429468.1| permease YjgP/YjgQ family protein [Krokinobacter diaphorus 4H-3-7-5] gi|332168945|gb|AEE18200.1| permease YjgP/YjgQ family protein [Krokinobacter diaphorus 4H-3-7-5] Length = 528 Score = 56.9 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 35/241 (14%), Positives = 88/241 (36%) Query: 24 VFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRN 83 +FI + + I ++ ++++K + +P+++ +V P + + + N Sbjct: 1 MFIFVLQSVWLYIQELAGRDLDFDVIIKFLLFAMPSLVTLVLPLSVLLTSIMTFGNFAEN 60 Query: 84 TELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFS 143 E + +TG S +K V++ I L+I F+ N I P + + L Sbjct: 61 YEFAAMKSTGISLQRAMKSVIYFVIFLAIGSFLFANHIIPASQIEFRNLRRNIGKLKPAM 120 Query: 144 YLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIIL 203 + F + +D ++++K + IV + + Y + + + + I Sbjct: 121 LIRSGQFNEITEDFNMRVAKKYGDRDQYLRDIVIHQAEKGRMGNYTVIIASEGELISSID 180 Query: 204 NDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPE 263 + + + + + K + E S + +LS L + ++ + Sbjct: 181 SPTLSLKLTDGNYYTEVQKKDYKERKKEPFAKSYFETYTLNIDLSELDAVDLDDKDINNS 240 Query: 264 L 264 Sbjct: 241 Y 241 Score = 47.3 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 15/112 (13%), Positives = 37/112 (33%), Gaps = 4/112 (3%) Query: 246 NLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKI 305 N L N + L + H++ ++ + A A++R+ Sbjct: 320 NTVADLENRKNKLKVDVKRLSKFEISLHEKYVLGFSCILLFFVG---APLGAIIRKGGLG 376 Query: 306 HPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL-YLFLFCISSIFLLMIKK 356 PI I + + + + + E N + +L F + + + + + Sbjct: 377 LPIVIGVVVFLTFHFIGIFAKNSAENNSISPFVASWLSTFILLPLGIYLTYR 428 >gi|71901308|ref|ZP_00683405.1| permease YjgP/YjgQ [Xylella fastidiosa Ann-1] gi|71728928|gb|EAO31062.1| permease YjgP/YjgQ [Xylella fastidiosa Ann-1] Length = 408 Score = 56.9 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 37/256 (14%), Positives = 94/256 (36%), Gaps = 5/256 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L +SF+ + + ++ + ++ + ++ +LL G + Sbjct: 48 MPKLDRYLLSDFTQSFIATLIVLMLVGVGGVLVDILGSIADGHFPAKLLLSQLGLRFISY 107 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP++ P + L + R++E+ +I + G ++ +L LA+ + + + + Sbjct: 108 LPLLLPLALMLGLLLSLGRLYRDSEMAVITSIGVGPGRMLPSILGLALPVVVLIGVCSLW 167 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P T L +A ++ + LE F + D + +S + + T + S+ Sbjct: 168 LAPWANRTANDLLEQANRSIIMAGLEAGTFTPMPDGGVVYLSSLSSDGTKLNAVFMQSQK 227 Query: 181 TQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISK--DISIMKFKSYTLQTESANS 235 + A+ G + + + L DG+ + ++ F + Sbjct: 228 DDRIAVVTAKRGEMYVQGDKGRYLRLEDGQRVDGPTDGAALNYRVLTFARNDALLPELSV 287 Query: 236 STIVLKANDQNLSFLL 251 + L+ Sbjct: 288 VYDSNHPDILPTFNLI 303 >gi|325108543|ref|YP_004269611.1| permease YjgP/YjgQ family protein [Planctomyces brasiliensis DSM 5305] gi|324968811|gb|ADY59589.1| permease YjgP/YjgQ family protein [Planctomyces brasiliensis DSM 5305] Length = 374 Score = 56.9 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 35/373 (9%), Positives = 96/373 (25%), Gaps = 22/373 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSST-------ESLNILLKIS 53 + FE + R + I+ + +I + ++ + + ++ I+ Sbjct: 2 LTIFERSVFRQFLFVNAVFLCVIMGLFTIIDLFDNVDDFVNHSGEGGFPVIAMKIVGYYG 61 Query: 54 GYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIF 113 + P + + + R ++ + G ++ P L + + Sbjct: 62 KMGLFIFDAAAVPMIA-ISLLTTMLMLKRKGQIKPFLSAGIPAYRVLTPALLCGVCVMTG 120 Query: 114 LFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI 173 L ++ I + + + + + Sbjct: 121 LKMANREILL-GNAVHHLHATRGKSQSQHRVAPRYDHASHILIDGWAVYPEASRIEQAAF 179 Query: 174 FIVDSRDTQTHKIYYAQSGSIDLDR----QAIILNDGEVHR----KSPISKDISIMKFKS 225 + A + +L E + + I + Sbjct: 180 VLPPEIAGNDMICLKAAEAKFYPKQGKRPSGWLLRQSEPKIDSIPLTEAGRQYVIRSRQP 239 Query: 226 YTLQTESANSSTIVLKAND----QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLF 281 + S S ++ KA + + LL +P H R+ + + Sbjct: 240 ENVFVVSDVSPDLIYKAKESSAFLSTRQLL-LRIRSPAIDSNTARDLEFNLHARIVEPVL 298 Query: 282 PVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL 341 + I+I ++ + L I + ++ P L L Sbjct: 299 TGLMVWIAIPLILRKESRGMIIAAGNCGLWLFIVIASTYAVRFMASGSLVTPVQAAWLPL 358 Query: 342 FLFCISSIFLLMI 354 +L +++L+ + Sbjct: 359 YLATPMAVWLVNL 371 >gi|198276083|ref|ZP_03208614.1| hypothetical protein BACPLE_02270 [Bacteroides plebeius DSM 17135] gi|198270895|gb|EDY95165.1| hypothetical protein BACPLE_02270 [Bacteroides plebeius DSM 17135] Length = 630 Score = 56.5 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 28/189 (14%), Positives = 72/189 (38%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K ++++L+ F + +FI + + + ++ + +N+L + T++ Sbjct: 5 KKLDIFVLKSFLLLFSGTFFICLFIFMMQFLWRYVDELVGKGLEINVLAQFFFLSALTLI 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P+ P + + ELL + G +I+PV+ + L + F +N+I Sbjct: 65 PLSLPLAILLAALMTFGNFGERYELLSMKAAGIPLFRIIRPVVLFCMFLGVMSFFFQNVI 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 PK + + L + + E +F+ + I + K + + + ++ + Sbjct: 125 GPKAQKELWTLLVSMKQKSPEVDIPEGVFYSDIEGYNIYVKKKDRDTGILKDVLIYNFSD 184 Query: 182 QTHKIYYAQ 190 + Sbjct: 185 GFENAHIIW 193 Score = 44.6 bits (103), Expect = 0.026, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 39/109 (35%), Gaps = 6/109 (5%) Query: 246 NLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKI 305 +L + + ++S++HK++T L +IF I A A++R+ Sbjct: 346 SLMSDWSMKSYMTREADNNIRRHQSDWHKKITLSLACIIFFFIG---APLGAIIRKGGLG 402 Query: 306 HPIFISLSISFGVFWGFSYI---IHKIEQNPYYIPILYLFLFCISSIFL 351 P+ IS+ I + S E N + + FL Sbjct: 403 MPVVISVLIFVLYYIIDSGATRVAKSGEMNIILGTWMSTIILAPLGGFL 451 >gi|307637757|gb|ADN80207.1| integral membrane protein [Helicobacter pylori 908] Length = 345 Score = 56.5 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 120/352 (34%), Gaps = 11/352 (3%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y+ + + F L + FI+ ++ ++ ++ S L+++ Y +P + + P Sbjct: 5 YLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFILP 64 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 F L+ ++ + ELL+ + G S T+ K + L++L+S L + I+ P + Sbjct: 65 ITFFAACALGLSRLSYDHELLVFFSLGVSPKTMTKAFVPLSLLVSAILLVFSLILIPTSK 124 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 S + + + + +L D L NN+ + + ++ Sbjct: 125 SAYYGFLRQKKDKIDINIRAGEFGQKLGDWLVYV--DKAENNSYDNLVLFSNKSLSQESF 182 Query: 187 YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 AQ G+I+ LN H + + F+ L+ + + ++ Sbjct: 183 ILAQKGNINNQNGVFELNLYNGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDATYLQGT 242 Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 N + + LFP+ + + + Sbjct: 243 DYLGYWKKAFGKNANKNQKRRFSQA----ILVSLFPLASVFLIPLFGIANPRFKTNWSYF 298 Query: 307 PIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + ++ + F + S + + +++ F +F I K+Y Sbjct: 299 YVLGAVGVYFLMVHVISTDLFLMT-----FFFPFIWAFISYLLFRKFILKRY 345 >gi|224026840|ref|ZP_03645206.1| hypothetical protein BACCOPRO_03597 [Bacteroides coprophilus DSM 18228] gi|224020076|gb|EEF78074.1| hypothetical protein BACCOPRO_03597 [Bacteroides coprophilus DSM 18228] Length = 631 Score = 56.5 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 30/215 (13%), Positives = 79/215 (36%), Gaps = 6/215 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K ++++L+ F + +FI + + + ++ + + +L + T++ Sbjct: 5 KKLDIFVLKSFLLLFAGTFFICLFIFMMQFLWRYVDELVGKGLEIKVLAQFFFLSALTLI 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P+ P + + ELL + G + +++PV+ +LL + F +N++ Sbjct: 65 PLSLPLAILLAALMTFGNFGERYELLSMKAAGIPLLRIMQPVILFCVLLGLTSFFFQNVV 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 PK + + L + + E +F+ D I + + + + ++ + Sbjct: 125 GPKAQKELWTLIVSMKQKSPEVDIPEGVFYSDIDGYNIYVKQKDRETGILKDVLIYNFSD 184 Query: 182 QTHKIYYAQSGS------IDLDRQAIILNDGEVHR 210 + + D + L +GE Sbjct: 185 GFENAHIIWAAEGKLELTADKQHLYLHLYNGEQFE 219 Score = 42.7 bits (98), Expect = 0.082, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 40/109 (36%), Gaps = 6/109 (5%) Query: 246 NLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKI 305 +LS + + +RS++HK++T L +IF I A A++R+ Sbjct: 346 SLSSDWSMKSYLTKETDANIRGHRSDWHKKITLSLACIIFFFIG---APLGAIIRKGGLG 402 Query: 306 HPIFISLSISFGVFWGFSYI---IHKIEQNPYYIPILYLFLFCISSIFL 351 P+ +S+ I + S E N + + FL Sbjct: 403 MPVVLSVLIFILYYIIDSGATRVAKSGEMNIILGTWMSTLVLAPLGGFL 451 >gi|152993423|ref|YP_001359144.1| hypothetical protein SUN_1840 [Sulfurovum sp. NBC37-1] gi|151425284|dbj|BAF72787.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1] Length = 341 Score = 56.5 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 55/354 (15%), Positives = 124/354 (35%), Gaps = 21/354 (5%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 YI ++FL + I ++ +++ +L + + LL + Y +P ++ P Sbjct: 7 YISSNFTKAFLTIFIPFFLIISLVYLVKISSLTAQIQINFLELLLLYSYSLPNIIFYTIP 66 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 F TN L ++++ EL+ + G +++ +L L IL S+ L + P + Sbjct: 67 LSFIAAVTNTLMKLSQDNELIALYALGLKAKKVLRSILLLGILFSVLLSTLSFLGIPISK 126 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 K + T + + L + D K + + I + + Sbjct: 127 QLYNAFKEKKKTEATLNIIPGKLGQKFGDYYIYVKEKDEKSKLFHDMVIYNRTKKDAEQF 186 Query: 187 YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 + ++ G ++ D+ L E + + + K+KS L+ + + + Sbjct: 187 FSSKQGQLNRDKLVASLLLKEGYGYTYTKNKLQQAKYKS--LEVFDSKQKYRFHFQDIVS 244 Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 L+ + + R+ + LF + LI I++ A + Sbjct: 245 YWALIKTDKH------------------RMGRALFYLFVSLIPILSVYLVAAFAMINPRY 286 Query: 307 PIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 S I F + I +E+ ++ L I ++ +K+ + Sbjct: 287 QANYSFIIIFSITLSLYLIASSLEKWGDIPALI-LTAIVIFIFGRVIFEKRVAR 339 >gi|154148833|ref|YP_001406853.1| permease YjgP/YjgQ [Campylobacter hominis ATCC BAA-381] gi|153804842|gb|ABS51849.1| permease YjgP/YjgQ [Campylobacter hominis ATCC BAA-381] Length = 353 Score = 56.5 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 42/352 (11%), Positives = 112/352 (31%), Gaps = 9/352 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK F+ YI + F++ + + F I +L + +S N+ L Sbjct: 1 MKIFQKYIGWTYFKYFVILFVALEFFYVGIDVLTNLKDF---PQSANLGLLYIAITAVAA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P +M RN E + G + +LI P +A+ ++ N Sbjct: 58 ITYTLPLSLVFALIIAKFNMIRNNEFISFFALGVPKNSLIIPPFLIALFITFGYISLNNT 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I + + + ++L + D + T + + +++ Sbjct: 118 IFV----KAVKFQKNITNFASLNENADDLLLKYDGNFIYMSKLNPKEKTAKDVIFLETNG 173 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKS-PISKDISIMKFKSYTLQTESANSSTIV 239 T ++ G + + + ++ + + KF+ + + + +TI Sbjct: 174 TNLISKAISKKGVYNDKKWLFSDVNTTFLPQNLRLGEQGLTYKFEKNAQKLNNFDPNTIK 233 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + + + ++ + + + + FP+ + ++ ++ Sbjct: 234 NVYDSSQTYTIYEAIKSIKTFKNQGINVQTLKAN-LFVMIFFPLFAPFMVLILYYYLPVI 292 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + + + + I WG +++ + N IP + + L Sbjct: 293 SRFFNLALLSFAFFIITLCVWGILFVLVRFSLNGVIIPEIGIILPIFVMFCY 344 >gi|15612083|ref|NP_223735.1| hypothetical protein jhp1018 [Helicobacter pylori J99] gi|4155611|gb|AAD06602.1| putative [Helicobacter pylori J99] Length = 345 Score = 56.5 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 50/352 (14%), Positives = 118/352 (33%), Gaps = 11/352 (3%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y+ + + F L + FI+ ++ ++ ++ S L+++ Y +P + + P Sbjct: 5 YLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFILP 64 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 F L+ ++ + ELL+ + G S + K + L++L+S L I+ P + Sbjct: 65 ITFFAACALGLSRLSYDHELLVFFSLGVSPKKMTKAFVPLSLLVSAILLAFSLILIPTSK 124 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 S + + + + +L D L NN+ + + ++ Sbjct: 125 SAYYGFLRQKKDKIDINIRAGEFGQKLGDWLVYV--DKTENNSYDNLVLFSNKSLSQESF 182 Query: 187 YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 AQ G+I+ LN H + + F+ L+ + + ++ Sbjct: 183 ILAQKGNINNQNGVFELNLYNGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYLQGT 242 Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 N + + LFP+ + + + Sbjct: 243 DYLGYWKKAFGKNANKNQKRRFSQA----ILVSLFPLASVFLIPLFGIANPRFKTNWSYF 298 Query: 307 PIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + ++ + F + S + + +++ F +F I K+Y Sbjct: 299 YVLGAVGVYFLMVHVISTDLFLMT-----FFFPFIWAFISYLLFRKFILKRY 345 >gi|208434987|ref|YP_002266653.1| hypothetical protein HPG27_1034 [Helicobacter pylori G27] gi|298735907|ref|YP_003728432.1| hypothetical protein HPB8_411 [Helicobacter pylori B8] gi|208432916|gb|ACI27787.1| hypothetical protein HPG27_1034 [Helicobacter pylori G27] gi|298355096|emb|CBI65968.1| conserved hypothetical protein [Helicobacter pylori B8] gi|317012864|gb|ADU83472.1| hypothetical protein HPLT_05405 [Helicobacter pylori Lithuania75] Length = 345 Score = 56.5 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 121/352 (34%), Gaps = 11/352 (3%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y+ + + F L + FI+ ++ ++ ++ S L+++ Y +P + + P Sbjct: 5 YLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFILP 64 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 F L+ ++ + ELL+ + G S T+ K + L++L+S L + I+ P + Sbjct: 65 ITFFAACALGLSRLSYDHELLVFFSLGVSPKTMTKAFVPLSLLVSAILLVFSLILIPTSK 124 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 S + + + + +L D L NN+ + + ++ Sbjct: 125 SAYYGFLRQKKDKIDINIRAGEFGQKLGDWLVYV--DKAENNSYDNLVLFSNKSLSQESF 182 Query: 187 YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 AQ G+I+ LN + H + + F+ L+ + + ++ Sbjct: 183 ILAQKGNINNQNGVFELNLYKGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYLQGT 242 Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 N + + LFP+ + + + Sbjct: 243 DYLGYWKKAFGKNANKNQKRRFSQA----ILVSLFPLASVFLIPLFGIANPRFKTNWSYF 298 Query: 307 PIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + ++ + F + S + + +++ F +F I K+Y Sbjct: 299 YVLGAVGVYFLMVHVISTDLFLMT-----FFFPFIWAFGSYLLFRKFILKRY 345 >gi|261838424|gb|ACX98190.1| integral membrane protein [Helicobacter pylori 51] Length = 345 Score = 56.5 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 121/352 (34%), Gaps = 11/352 (3%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y+ + + F L + FI+ ++ ++ ++ S L+++ Y +P + + P Sbjct: 5 YLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFILP 64 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 F L+ ++ + ELL+ + G S T+ K + L++L+S L + I+ P + Sbjct: 65 ITFFAACALGLSRLSYDHELLVFFSLGVSPKTMTKAFVPLSLLVSAILLVFSLILIPTSK 124 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 S + + + + +L D L NN+ + + ++ Sbjct: 125 SAYYGFLRQKKDKIDINIRAGEFGQKLGDWLVYV--DKAENNSYDNLVLFSNKSLSQESF 182 Query: 187 YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 AQ G+I+ LN + H + + F+ L+ + + ++ Sbjct: 183 ILAQKGNINNQNGVFELNLYKGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYLQGT 242 Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 N + + LFP+ + + + Sbjct: 243 DYLGYWKKAFGKNANKNQKRRFSQA----ILVSLFPLASVFLIPLFGIANPRFKTNWSYF 298 Query: 307 PIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + ++ + F + S + + +++ F +F I K+Y Sbjct: 299 YVLGAVGVYFLMVHVISTDLFLMT-----FFFPFIWAFVSYLLFRKFILKRY 345 >gi|304383499|ref|ZP_07365959.1| conserved hypothetical protein [Prevotella marshii DSM 16973] gi|304335309|gb|EFM01579.1| conserved hypothetical protein [Prevotella marshii DSM 16973] Length = 634 Score = 56.5 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 34/204 (16%), Positives = 82/204 (40%), Gaps = 2/204 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K +++I + G F+ + + F+ + + + ++++ +L IL + Y+ ++ Sbjct: 5 KKLDIFITKQFGLLFVGTFVICQFVLMMQFLWRWVDILIGKGLALEILAQFFWYMGLMLV 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P P + + V ++ ++EL I G S + + ++ L+ L++I F +N + Sbjct: 65 PQALPLAILLSSLIVFGNLGESSELTAIKAAGISLMQSFRSLILLSCLIAIGSFYFQNNV 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN--TLQGIFIVDSR 179 P+ S + L + + E +F+ + + K N + + + Sbjct: 125 GPEANSRLNVLIQSMRHKNPELEIPEGIFYDGIPQSNLYVQKKNRDTGVLYGIMIYRMTD 184 Query: 180 DTQTHKIYYAQSGSIDLDRQAIIL 203 + I A SG + L Sbjct: 185 SYEDAAIILADSGRLQTTADRKHL 208 Score = 36.1 bits (81), Expect = 7.7, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 34/94 (36%), Gaps = 6/94 (6%) Query: 261 RPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFW 320 +L+ + E + T L +IF I A A++R+ P+ IS+ + + Sbjct: 363 GDQLIREHDIEAISKFTLALSCLIFFFIG---APLGAIIRKGGLGVPVIISVLVYIIYYI 419 Query: 321 GFSYIIHKIEQNPYYIPI---LYLFLFCISSIFL 351 + + + L + SIF+ Sbjct: 420 LDNSGYRMARGGMWTVWFGKGLAPAVLIPLSIFI 453 >gi|254779645|ref|YP_003057751.1| hypothetical protein HELPY_1062 [Helicobacter pylori B38] gi|254001557|emb|CAX29575.1| Conserved hypothetical protein; putative membrane protein; putative signal peptide [Helicobacter pylori B38] Length = 345 Score = 56.5 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 121/352 (34%), Gaps = 11/352 (3%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y+ + + F L + FI+ ++ ++ ++ S L+++ Y +P + + P Sbjct: 5 YLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFILP 64 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 F L+ ++ + ELL+ + G S T+ K + L++L+S L + I+ P + Sbjct: 65 ITFFAACALGLSRLSYDHELLVFFSLGVSPKTMTKAFVPLSLLVSAILLVFSLILIPTSK 124 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 S + + + + +L D L NN+ + + ++ Sbjct: 125 SAYYGFLRQKKDKIDINIRAGEFGQKLGDWLVYV--DKAENNSYDNLVLFSNKSLSQESF 182 Query: 187 YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 AQ G+I+ LN + H + + F+ L+ + + ++ Sbjct: 183 ILAQKGNINNQNGVFELNLYKGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYLQGT 242 Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 N + + LFP+ + + + Sbjct: 243 DYLGYWKKAFGKNANKNQKRRFSQA----ILVSLFPLASVFLIPLFGIANPRFKTNWSYF 298 Query: 307 PIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + ++ + F + S + + +++ F +F I K+Y Sbjct: 299 YVLGAVGVYFLMVHVISTDLFLMT-----FFFPFIWAFASYLLFRKFILKRY 345 >gi|32266995|ref|NP_861027.1| hypothetical protein HH1496 [Helicobacter hepaticus ATCC 51449] gi|32263047|gb|AAP78093.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449] Length = 359 Score = 56.5 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 39/358 (10%), Positives = 106/358 (29%), Gaps = 12/358 (3%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 ++ + F + L + I +L+ ++ + S N+L+ Y L Sbjct: 2 IFRFVGVYYLKYFFIIFLGLEGFFLAIDMLKYVDELPD---SANLLILFLFYNGIFALTY 58 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + + + ++++L + G S+ ++ P+L ++ + Sbjct: 59 TLPISLVLCSILFYMAFLKSSQLTALMALGYSKRQILAPLLVISSVFIGGFIGLNTTSFA 118 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + + + L + + + + Sbjct: 119 YAKEYAESIIYQQNTQNARENLLLKSDNQYIFIRKLYPLLNEQARAEGIKVFTLDGEHKL 178 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPI---SKDISIMKFKSYTLQTESANSSTIVL 240 + AQ + + IL + + + + + + +S + Sbjct: 179 KNYHEAQEAFFENN--VWILKNVKSLEIASSLTLGEKALKITTSGEIEILKDFSSKVLET 236 Query: 241 KANDQNLSFLLNPNPNNPNYRPEL--LETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 A D+ + +++ + + + RS + L F + I+I++ +L Sbjct: 237 IAQDKPTASVIDAIASLRIAHKQNVSSDKIRSILYALLVIPFFVPLC--IAIISYYIPSL 294 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 R F+ + + V+ F + Y I L I + L + Sbjct: 295 PRYGNLTFISFVCIIGALAVWGLFFSLSQLSVAGLIYPEIGLLLPMGILFVVFLWHIR 352 >gi|325996358|gb|ADZ51763.1| integral membrane protein [Helicobacter pylori 2018] gi|325997946|gb|ADZ50154.1| hypothetical protein hp2017_1044 [Helicobacter pylori 2017] Length = 345 Score = 56.5 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 120/352 (34%), Gaps = 11/352 (3%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y+ + + F L + FI+ ++ ++ ++ S L+++ Y +P + + P Sbjct: 5 YLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFILP 64 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 F L+ ++ + ELL+ + G S T+ K + L++L+S L + I+ P + Sbjct: 65 ITFFAACALGLSRLSYDHELLVFFSLGVSPKTMTKAFVPLSLLVSAILLVFSLILIPTSK 124 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 S + + + + +L D L NN+ + + ++ Sbjct: 125 SAYYGFLRQKKDKIDINIRAGEFGQKLGDWLVYV--DKAENNSYDNLVLFSNKSLSQESF 182 Query: 187 YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 AQ G+I+ LN H + + F+ L+ + + ++ Sbjct: 183 ILAQKGNINNQNGVFELNLYNGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYLQGT 242 Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 N + + LFP+ + + + Sbjct: 243 DYLGYWKKAFGKNANKNQKRRFSQA----ILVSLFPLASVFLIPLFGIANPRFKTNWSYF 298 Query: 307 PIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + ++ + F + S + + +++ F +F I K+Y Sbjct: 299 YVLGAVGVYFLMVHVISTDLFLMT-----FFFPFIWAFISYLLFRKFILKRY 345 >gi|319779266|ref|YP_004130179.1| hypothetical protein TEQUI_1112 [Taylorella equigenitalis MCE9] gi|317109290|gb|ADU92036.1| hypothetical protein TEQUI_1112 [Taylorella equigenitalis MCE9] Length = 372 Score = 56.2 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 59/365 (16%), Positives = 125/365 (34%), Gaps = 8/365 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ ++ I + + ++ + + + + + +S +++L IS + T Sbjct: 1 MILFKRSVVSEILNNAGVVFSTLLIVWLSVLLARLLAQAASGIIGPDLVLGISAFSSITA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP++ + ++ R E+ + TG S + IKPVL +AI +S+ + I + Sbjct: 61 LPIILIVSLFISIITTVSRNYREQEMYVWFTTGVSLVDWIKPVLRIAIPVSVVIAILTIV 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P I++ + FS + + F D + + + NN + I Sbjct: 121 TSPWAYLQIEEYRQRYAQRSDFSKIVQGQFLETDAGARVFFIEPSENNNHEFGKIFAREV 180 Query: 181 TQTHKIYYAQSG-----SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 T+ + + + I L G + + + KF S T+ NS Sbjct: 181 TEEWISILNADYGDFKTNFETGERYIELGSGTRYDIRIGTPEFRASKFSSVTMNINQKNS 240 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 T + + L + S+ RL+ L + L+ I Sbjct: 241 YT-EEQIRTRALEKIKARPFTQLIKDNNSRSD--SQILWRLSLPLAALNLALLGIPLGSV 297 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + I + + + + + + +L LF ++FL K Sbjct: 298 NPRMGKSADIFMAALVGMLYMNLLNVMRGWVAAEQIGLWTGFVLVNGLFSALAVFLFWYK 357 Query: 356 KKYTK 360 + K Sbjct: 358 LRIRK 362 >gi|29347827|ref|NP_811330.1| hypothetical protein BT_2417 [Bacteroides thetaiotaomicron VPI-5482] gi|29339729|gb|AAO77524.1| putative permease [Bacteroides thetaiotaomicron VPI-5482] Length = 616 Score = 56.2 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 31/195 (15%), Positives = 75/195 (38%), Gaps = 6/195 (3%) Query: 12 IGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAM 71 +F + I + + + ++ + ++++ + Y T++P+ P + Sbjct: 3 FIGTFFICLF----IFMMQFLWRYVDELVGKGLDMSVIAQFFFYSALTLVPISLPLAILL 58 Query: 72 ETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQ 131 + + ELL + G S + +++P+ F L F +N++ P ++ + Sbjct: 59 ASLITFGNFGERYELLAMKAAGISLLKIMRPLAFFVCGLVAVSFYFQNVVGPIAQTKLYT 118 Query: 132 LSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ--THKIYYA 189 L + + E +F+ D +KI+K N + ++ + I YA Sbjct: 119 LIISMKQKSPELDIPEGVFYSEIPDYNLKIAKKNRKTGMMYDVLIYNLKDGFENAHIIYA 178 Query: 190 QSGSIDLDRQAIILN 204 SG +++ L Sbjct: 179 DSGRMEMTADKQHLW 193 Score = 41.5 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 44/97 (45%), Gaps = 4/97 (4%) Query: 246 NLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKI 305 NLS +N + + E+HK++T L ++F I A ++R+ Sbjct: 331 NLSSDINFKSYTMGSHDYSMRKHEIEWHKKITISLSCLLFFFIG---APLGGIIRKGGLG 387 Query: 306 HPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 P+ +S+ + F +++ +K+ ++ ++ + ++ Sbjct: 388 MPVIVSVMV-FIIYYIIDNTGYKMARDGRWVVWMGVW 423 >gi|188996313|ref|YP_001930564.1| permease YjgP/YjgQ family protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188931380|gb|ACD66010.1| permease YjgP/YjgQ family protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 336 Score = 56.2 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 50/353 (14%), Positives = 115/353 (32%), Gaps = 23/353 (6%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y+++ ++F++ I Q+L + + ++ K+ + + Sbjct: 1 MKILDKYLIKLFFKNFILLIGLFSLIITSSQLLHLPSFA--YSMNIIDFSKLLFLIDISF 58 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + F F + V S+ E+ + + G S+ L+KPV + ++ I F+ + Sbjct: 59 IKYQLLFAFFISWLLVGISLRDKNEIYAVYSAGISKKQLLKPVFIMTVIFVIIAFVFSTV 118 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I P + + + F +++D++ + + K + + Sbjct: 119 IVPSANRERYKFLTYKVKSYILENVSPKNFSKINDNVSVYVEKK------EKNTFYNILI 172 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 Y + +IL DG + S S D + +++L ++ Sbjct: 173 YNASNGYLITAKEGMFISNNLILKDGYIQLPSEKSFDTIKYEKYTFSLDVSYIKEISMQD 232 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + E S R F + F + + Sbjct: 233 -----------FRTKDLLKLAVEEDSKVLSILADRFY---FVIPFMFLGFIGFLSGINTY 278 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + K + ++S+S G Y + IE+ P + + L I + + Sbjct: 279 RS-KETLLTFAVSLSIGYMVLNYYFLKIIEKMPALFFVYPILLIVIFYLVYKL 330 >gi|317011287|gb|ADU85034.1| hypothetical protein HPSA_05295 [Helicobacter pylori SouthAfrica7] Length = 345 Score = 56.2 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 52/352 (14%), Positives = 119/352 (33%), Gaps = 11/352 (3%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y+ + + F L + FI+ ++ ++ ++ S L+++ Y +P + + P Sbjct: 5 YLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFILP 64 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 F L+ ++ + ELL+ + G S + K + L+IL+S L + I+ P + Sbjct: 65 ITFFAACALGLSRLSYDHELLVFFSLGVSPKKMAKAFVPLSILVSAILLVFSLILIPTSK 124 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 S + + + + +L D L NN+ + + ++ Sbjct: 125 SAYYGFLRQKKDKIDINIRAGEFGQKLGDWLVYV--DKAENNSYDNLVLFSNKSLSQESF 182 Query: 187 YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 AQ G+I+ LN H + + F+ L+ + + ++ Sbjct: 183 ILAQKGNINNKNGVFELNLYSGHAYFTQGDKMRKIDFEELHLRNKLKSFNSNDAAYLQGT 242 Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 N + + LFP+ + + + Sbjct: 243 DYLGYWKKAFGKNANKNQKRRFSQA----ILVSLFPLASVFLIPLFGIANPRFKTNWSYF 298 Query: 307 PIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + ++ I F + S + + +++ F +F I K+Y Sbjct: 299 YVLGAVGIYFLMVHVISTDLFLMT-----FFFPFIWAFASYLLFRKFILKRY 345 >gi|217034468|ref|ZP_03439880.1| hypothetical protein HP9810_890g13 [Helicobacter pylori 98-10] gi|216943070|gb|EEC22547.1| hypothetical protein HP9810_890g13 [Helicobacter pylori 98-10] gi|308062367|gb|ADO04255.1| hypothetical protein HPCU_05530 [Helicobacter pylori Cuz20] gi|317178605|dbj|BAJ56393.1| hypothetical protein HPF30_0296 [Helicobacter pylori F30] gi|332673892|gb|AEE70709.1| conserved hypothetical protein [Helicobacter pylori 83] Length = 345 Score = 56.2 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 50/352 (14%), Positives = 119/352 (33%), Gaps = 11/352 (3%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y+ + + F L + FI+ ++ ++ ++ S L+++ Y +P + + P Sbjct: 5 YLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFILP 64 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 F L+ ++ + ELL+ + G S + K + L++L+S L + I+ P + Sbjct: 65 ITFFAACALGLSRLSYDHELLVFFSLGVSPKKMTKAFVPLSLLVSAILLVFSLILIPTSK 124 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 S + + + + +L D L NN+ + + ++ Sbjct: 125 SAYYGFLRQKKDKIDINIRAGEFGQKLGDWLVYV--DKAENNSYDNLVLFSNKSLSQESF 182 Query: 187 YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 AQ G+I+ LN H + + F+ L+ + + ++ Sbjct: 183 ILAQKGNINNQNGVFELNLYSGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYLQGT 242 Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 N + + LFP+ + + + Sbjct: 243 DYLGYWKKAFGKNANKNQKRRFSQA----ILVSLFPLASVFLIPLFGIANPRFKTNWSYF 298 Query: 307 PIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + ++ + F + S + + +++ F +F I K+Y Sbjct: 299 YVLGAVGVYFLMVHVISTDLFLMT-----FFFPFIWAFVSYLLFRKFILKRY 345 >gi|108563456|ref|YP_627772.1| hypothetical protein HPAG1_1031 [Helicobacter pylori HPAG1] gi|107837229|gb|ABF85098.1| conserved hypothetical integral membrane protein [Helicobacter pylori HPAG1] Length = 345 Score = 56.2 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 120/352 (34%), Gaps = 11/352 (3%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y+ + + F L + FI+ ++ ++ ++ S L+++ Y +P + + P Sbjct: 5 YLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFILP 64 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 F L+ ++ + ELL+ + G S T+ K + L++L+S L + I+ P + Sbjct: 65 ITFFAACALGLSRLSYDHELLVFFSLGVSPKTMTKAFVPLSLLVSAILLVFSLILIPTSK 124 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 S + + + + +L D L NN+ + + ++ Sbjct: 125 SAYYGFLRQKKDKIDINIRAGEFGQKLGDWLVYV--DKAENNSYDNLVLFSNKSLSQESF 182 Query: 187 YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 AQ G+I+ LN H + + F+ L+ + + ++ Sbjct: 183 ILAQKGNINNQNGVFELNLYSGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYLQGT 242 Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 N + + LFP+ + + + Sbjct: 243 DYLGYWKKAFGKNANKNQKRRFSQA----ILVSLFPLASVFLIPLFGIANPRFKTNWSYF 298 Query: 307 PIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + ++ + F + S + + +++ F +F I K+Y Sbjct: 299 YVLGAVGVYFLMVHVISTDLFLMT-----FFFPFIWAFGSYLLFRKFILKRY 345 >gi|308184829|ref|YP_003928962.1| hypothetical protein HPSJM_05385 [Helicobacter pylori SJM180] gi|308060749|gb|ADO02645.1| hypothetical protein HPSJM_05385 [Helicobacter pylori SJM180] Length = 345 Score = 56.2 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 52/352 (14%), Positives = 121/352 (34%), Gaps = 11/352 (3%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y+ + + F L + FI+ ++ ++ ++ S L+++ Y +P + + P Sbjct: 5 YLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFILP 64 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 F L+ ++ + ELL+ + G S T+ K + L++L+S L + I+ P + Sbjct: 65 ITFFAACALGLSRLSYDHELLVFFSLGVSPKTMTKAFVPLSLLVSAILLVFSLILIPTSK 124 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 S + + + + +L D L NN+ + + ++ Sbjct: 125 SAYYGFLRQKKDKIDINIRAGEFGQKLGDWLVYV--DKAENNSYDNLVLFSNKSLSQESF 182 Query: 187 YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 AQ G+I+ LN + H + + F+ L+ + + ++ Sbjct: 183 ILAQKGNINNQNGVFELNLYKGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYLQGT 242 Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 N + + LFP+ + + + Sbjct: 243 DYLGYWKKAFGKNANKNQKRRFSQA----ILVSLFPLASVFLIPLFGIANPRFKTNWSYF 298 Query: 307 PIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + ++ I F + S + + +++ F +F I K+Y Sbjct: 299 YVLGAVGIYFLMVHVISTDLFLMT-----FFFPFIWAFISYLLFRKFILKRY 345 >gi|261839824|gb|ACX99589.1| hypothetical protein HPKB_1021 [Helicobacter pylori 52] gi|315586981|gb|ADU41362.1| conserved hypothetical protein [Helicobacter pylori 35A] gi|317182344|dbj|BAJ60128.1| hypothetical protein HPF57_1054 [Helicobacter pylori F57] Length = 345 Score = 56.2 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 120/352 (34%), Gaps = 11/352 (3%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y+ + + F L + FI+ ++ ++ ++ S L+++ Y +P + + P Sbjct: 5 YLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFILP 64 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 F L+ ++ + ELL+ + G S T+ K + L++L+S L + I+ P + Sbjct: 65 ITFFAACALGLSRLSYDHELLVFFSLGVSPKTMTKAFVPLSLLVSAILLVFSLILIPTSK 124 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 S + + + + +L D L NN+ + + ++ Sbjct: 125 SAYYGFLRQKKDKIDINIRAGEFGQKLGDWLVYV--DKAENNSYDNLVLFSNKSLSQESF 182 Query: 187 YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 AQ G+I+ LN H + + F+ L+ + + ++ Sbjct: 183 ILAQKGNINNQNGVFELNLYSGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYLQGT 242 Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 N + + LFP+ + + + Sbjct: 243 DYLGYWKKAFGKNANKNQKRRFSQA----ILVSLFPLASVFLIPLFGIANPRFKTNWSYF 298 Query: 307 PIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + ++ + F + S + + +++ F +F I K+Y Sbjct: 299 YVLGAVGVYFLMVHVISTDLFLMT-----FFFPFIWAFVSYLLFRKFILKRY 345 >gi|308183196|ref|YP_003927323.1| hypothetical protein HPPC_05300 [Helicobacter pylori PeCan4] gi|308065381|gb|ADO07273.1| hypothetical protein HPPC_05300 [Helicobacter pylori PeCan4] Length = 345 Score = 56.2 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 120/352 (34%), Gaps = 11/352 (3%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y+ + + F L + FI+ ++ ++ ++ S L+++ Y +P + + P Sbjct: 5 YLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFILP 64 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 F L+ ++ + ELL+ + G S + K + L++L+S L + I+ P + Sbjct: 65 ITFFAACALGLSRLSYDHELLVFFSLGVSPKKMTKAFVPLSLLVSAILLVFSLILIPTSK 124 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 ST + + + + +L D L NN+ + + ++ Sbjct: 125 STYYGFLRQKKDKIDINIRAGEFGQKLGDWLVYV--DKAENNSYDNLVLFSNKSLSQESF 182 Query: 187 YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 AQ G+I+ LN H + + F+ L+ + + ++ Sbjct: 183 ILAQKGNINNQNGVFELNLYNGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYLQGT 242 Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 N + + LFP+ + + + Sbjct: 243 DYLGYWKKAFGKNANKNQKRRFSQA----ILVSLFPLASVFLIPLFGIANPRFKTNWSYF 298 Query: 307 PIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + ++ + F + S + + +++ F +F I K+Y Sbjct: 299 YVLGAVGVYFLMVHVISTDLFLMT-----FFFPFIWAFGSYLLFRKFILKRY 345 >gi|294645356|ref|ZP_06723067.1| putative membrane protein [Bacteroides ovatus SD CC 2a] gi|292639294|gb|EFF57601.1| putative membrane protein [Bacteroides ovatus SD CC 2a] Length = 616 Score = 56.2 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 31/195 (15%), Positives = 76/195 (38%), Gaps = 6/195 (3%) Query: 12 IGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAM 71 +F + I + + + ++ + ++++ + Y T++P+ P + Sbjct: 3 FIGTFFICLF----IFMMQFLWRYVDELVGKGLEMSVMAQFFFYSALTLVPVSLPLAVLL 58 Query: 72 ETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQ 131 + + ELL + G S + +++P+ F L F +N++ P ++ + Sbjct: 59 ASLITFGNFGERYELLAMKAAGISLLKIMRPLAFFVCGLVGVSFYFQNVVGPIAQAKLGT 118 Query: 132 LSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTH--KIYYA 189 L + + E +F+ D +K++K N + ++ S +I YA Sbjct: 119 LILSMKQKSPELDIPEGVFYSEIKDYNLKVAKKNRKTGMLYDVLIYSMKDGFEKARIIYA 178 Query: 190 QSGSIDLDRQAIILN 204 SG +++ L Sbjct: 179 DSGRLEMTADKQHLW 193 Score = 46.9 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 14/129 (10%), Positives = 46/129 (35%), Gaps = 4/129 (3%) Query: 229 QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 + +N++ L + +++E+HK++T L ++F I Sbjct: 314 SLTQKQKVISSAVSRAENVANDLGFKKFTMENNDYSIRKHKTEWHKKITISLSCLLFFFI 373 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCIS 347 A ++R+ P+ +S+ + + + + + + ++ ++ Sbjct: 374 G---APLGGIIRKGGLGMPVIVSVLVFIIYYIIDNTGYKMARDGKWIVWMGMWTSSAVLA 430 Query: 348 SIFLLMIKK 356 + + + K Sbjct: 431 PLGIFLTYK 439 >gi|260174364|ref|ZP_05760776.1| hypothetical protein BacD2_21081 [Bacteroides sp. D2] Length = 616 Score = 56.2 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 30/195 (15%), Positives = 75/195 (38%), Gaps = 6/195 (3%) Query: 12 IGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAM 71 +F + I + + + ++ + ++++ + Y T++P+ P + Sbjct: 3 FIGTFFICLF----IFMMQFLWRYVDELVGKGLEMSVMAQFFFYSALTLVPVSLPLAVLL 58 Query: 72 ETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQ 131 + + ELL + G S + +++P+ F L F +N++ P ++ + Sbjct: 59 ASLITFGNFGERYELLAMKAAGISLLKIMRPLAFFVCGLVGVSFYFQNVVGPIAQAKLGT 118 Query: 132 LSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ--THKIYYA 189 L + + E +F+ D +K++K N + ++ + I YA Sbjct: 119 LILSMKQKSPELDIPEGVFYSEIKDYNLKVAKKNRKTGMLYDVLIYNMKDGFENAHIIYA 178 Query: 190 QSGSIDLDRQAIILN 204 SG +++ L Sbjct: 179 DSGRLEMTADKQHLW 193 Score = 46.1 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 14/129 (10%), Positives = 46/129 (35%), Gaps = 4/129 (3%) Query: 229 QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 + +N++ L + +++E+HK++T L ++F I Sbjct: 314 SLTQKQKVLSSAVSRAENVANDLGFKKFTMENNDYSIRKHKTEWHKKITISLSCLLFFFI 373 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCIS 347 A ++R+ P+ +S+ + + + + + + ++ ++ Sbjct: 374 G---APLGGIIRKGGLGMPVIVSVLVFIIYYIIDNTGYKMARDGKWIVWMGMWTSSAVLA 430 Query: 348 SIFLLMIKK 356 + + + K Sbjct: 431 PLGVFLTYK 439 >gi|90403464|dbj|BAE91930.1| hypothetical transmembrane protein [Brevundimonas diminuta] Length = 81 Score = 56.2 bits (133), Expect = 9e-06, Method: Composition-based stats. Identities = 13/77 (16%), Positives = 36/77 (46%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+ R IG + + + I + Q L ++ ++ +S+ +++K++ +P + Sbjct: 1 MTLIQRYLFRQIGLPIVAAVAALAGIGLLSQSLDQLEVIVERGQSVWVMVKLTLLALPQL 60 Query: 61 LPMVTPFCFAMETTNVL 77 + ++ P + L Sbjct: 61 IAVILPIGLFVGALIAL 77 >gi|145629199|ref|ZP_01784998.1| predicted permease [Haemophilus influenzae 22.1-21] gi|144978702|gb|EDJ88425.1| predicted permease [Haemophilus influenzae 22.1-21] Length = 270 Score = 56.2 bits (133), Expect = 9e-06, Method: Composition-based stats. Identities = 32/261 (12%), Positives = 87/261 (33%), Gaps = 19/261 (7%) Query: 99 LIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLY 158 ++K L +++L + + + P + A+ T L F +++ Sbjct: 1 MVKVALIMSLLTAGIAAYNALWLSPWAIQKQVNMVEDAKANPTVGVLSSGQFISTNNNNV 60 Query: 159 IKISKYNPNNTLQGIFIVDSRDTQ--THKIYYAQSGSI---DLDRQAIILNDGEVHRKSP 213 + +N ++ +++ + + A+ G + Q + L + + + Sbjct: 61 VLFIDKIKDNQIRNVYLFQMTPQKQTKPSVITAEKGELIALPNGDQVLNLKNTKRVEGTS 120 Query: 214 ISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFH 273 D I F Y ++ + + LS L++ + ++ ++E H Sbjct: 121 ALPDFRITHFDEYHAYLGYQSAENTNDEVAELTLSQLIDLDSSSA----------KAELH 170 Query: 274 KRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN- 332 R+T L + LI++ + ++ + I +L + F S Sbjct: 171 WRITLILAVPLMALIAVPL---SRVNPRQGRFAKILPALLLYLIYFLLQSSFKSAGSAGK 227 Query: 333 PYYIPILYLFLFCISSIFLLM 353 ++ L + +++ Sbjct: 228 LEAELLMPLVNIGFFLLAVVL 248 >gi|297380268|gb|ADI35155.1| Hypothetical protein HPV225_1109 [Helicobacter pylori v225d] gi|308063875|gb|ADO05762.1| hypothetical protein HPSAT_05215 [Helicobacter pylori Sat464] Length = 345 Score = 55.8 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 50/352 (14%), Positives = 119/352 (33%), Gaps = 11/352 (3%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y+ + + F L + FI+ ++ ++ ++ S L+++ Y +P + + P Sbjct: 5 YLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFILP 64 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 F L+ ++ + ELL+ + G S + K + L++L+S L + I+ P + Sbjct: 65 ITFFAACALGLSRLSYDHELLVFFSLGVSPKKMTKAFVPLSLLVSAILLVFSLILIPTSK 124 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 S + + + + +L D L NN+ + + ++ Sbjct: 125 SAYYGFLRQKKDKIDINIRAGEFGQKLGDWLVYV--DKAENNSYDNLVLFSNKSLSQESF 182 Query: 187 YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 AQ G+I+ LN H + + F+ L+ + + ++ Sbjct: 183 ILAQKGNINNQNGVFELNLYSGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYLQGT 242 Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 N + + LFP+ + + + Sbjct: 243 DYLGYWKKAFGKNANKNQKRRFSQA----ILVSLFPLASVFLIPLFGIANPRFKTNWSYF 298 Query: 307 PIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + ++ + F + S + + +++ F +F I K+Y Sbjct: 299 YVLGAVGVYFLMVHVISTDLFLMT-----FFFPFIWAFISYLLFRKFILKRY 345 >gi|213855151|ref|ZP_03383391.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 206 Score = 55.8 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 20/159 (12%), Positives = 55/159 (34%), Gaps = 14/159 (8%) Query: 193 SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLN 252 + Q + LN G + + +D I F++Y + + ++ L N Sbjct: 37 QLRDGSQVVTLNKGTRFEGTALLRDFRITDFQNYQAIIGHQAVALDPNDTDQMDMRTLWN 96 Query: 253 PNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISL 312 + + R+E H R+T + L+ + ++ ++ + ++ Sbjct: 97 TDND----------RARAELHWRITLVFTVFMMALM---VVPLSVVNPRQGRVLSMLPAM 143 Query: 313 SISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + F + I + P+++++ + + L Sbjct: 144 LLYLLFFLIQTSIKSNGGK-GKLDPVIWMWAVNLIYLAL 181 >gi|188994506|ref|YP_001928758.1| hypothetical protein PGN_0642 [Porphyromonas gingivalis ATCC 33277] gi|188594186|dbj|BAG33161.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC 33277] Length = 651 Score = 55.8 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 97/259 (37%), Gaps = 11/259 (4%) Query: 1 MKSF---ELYILRCIGRSFL----MSCLFIVFIAWVIQILQRINLVSSSTESLNILLKIS 53 MK LY+ + ++FL M+ F+ + + + ++ + S IL K+ Sbjct: 1 MKKLPVKRLYLF--MLQTFLPLLLMTFAICWFVVLMQFLWKYVDDMVGKGLSAIILSKML 58 Query: 54 GYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIF 113 Y T++PM P + + ++ ELL + + G ++KP+ F + ++ Sbjct: 59 FYAAMTLVPMALPLGVLLASLMTFGNLGERLELLAMKSAGVPLYRIMKPLFFSVVAIACG 118 Query: 114 LFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI 173 LFI +N + + + + A+ A + E F+ + ++K + + Sbjct: 119 LFIFQNDLMIQSQVKFYTILFSARRATPELEIPEGSFYNGIHGYNLFVAKKDRRTGMLHD 178 Query: 174 FIVDSRDTQT--HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 ++ +I A SG + +D L ++ + + + T Sbjct: 179 MMIYDHSQGFADARIIVADSGKLKMDEGKTFLTLMLHSGETFQNLRSQQTESNAPTPYMR 238 Query: 232 SANSSTIVLKANDQNLSFL 250 + ++ D N S + Sbjct: 239 ERFRTKEIVIPFDANFSLM 257 Score = 45.0 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 18/125 (14%), Positives = 45/125 (36%), Gaps = 5/125 (4%) Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + ++++ D + + + R + R E+H + T + +IF I Sbjct: 350 LEARSVMINRFDTYIGECMIMKESTAFERDRRISHMR-EWHTKFTYPVACLIFFFIG--- 405 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIFL 351 A A++R+ PI S+ + ++ + + + ++L F + Sbjct: 406 APLGAIIRKGGLGTPIVASVLFFVLYYMVDTFGVKMAKTEEWPVWLGMWLSTFVLVPFGF 465 Query: 352 LMIKK 356 + K Sbjct: 466 FLTYK 470 >gi|71275899|ref|ZP_00652182.1| permease YjgP/YjgQ [Xylella fastidiosa Dixon] gi|71899263|ref|ZP_00681425.1| permease YjgP/YjgQ [Xylella fastidiosa Ann-1] gi|71163276|gb|EAO12995.1| permease YjgP/YjgQ [Xylella fastidiosa Dixon] gi|71730996|gb|EAO33065.1| permease YjgP/YjgQ [Xylella fastidiosa Ann-1] Length = 408 Score = 55.8 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 36/256 (14%), Positives = 93/256 (36%), Gaps = 5/256 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L +SF+ + + ++ + ++ + ++ +LL G + Sbjct: 48 MPKLDRYLLSDFTQSFIATLIVLMLVGVGGVLVDILGSIADGHFPAKLLLSQLGLRFISY 107 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP++ P + L + R++E+ +I + G ++ +L L + + + + + Sbjct: 108 LPLLLPLALMLGLLLSLGRLYRDSEMAVITSIGVGPGRMLPSILGLVLPVVVLIGVCSLW 167 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P T L +A ++ + LE F + D + +S + + T + S+ Sbjct: 168 LAPWANRTANDLLEQANRSIIMAGLEAGTFTPMPDGGVVYLSSLSSDGTKLNAVFMQSQK 227 Query: 181 TQTHKIYYAQSGSID---LDRQAIILNDGEVHRKSPISK--DISIMKFKSYTLQTESANS 235 + A+ G + + + L DG+ + ++ F + Sbjct: 228 DDRIAVVTAKRGEMYVQGDKGRYLRLEDGQRVDGPADGAALNYRVLTFARNDALLPELSV 287 Query: 236 STIVLKANDQNLSFLL 251 + L+ Sbjct: 288 VYDSNHPDILPTFNLI 303 >gi|317180825|dbj|BAJ58611.1| hypothetical protein HPF32_1029 [Helicobacter pylori F32] Length = 345 Score = 55.8 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 120/352 (34%), Gaps = 11/352 (3%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y+ + + F L + FI+ ++ ++ ++ S L+++ Y +P + + P Sbjct: 5 YLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFILP 64 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 F L+ ++ + ELL+ + G S T+ K + L++L+S L + I+ P + Sbjct: 65 ITFFAACALGLSRLSYDHELLVFFSLGVSPKTMTKAFVPLSLLVSAILLVFSLILIPTSK 124 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 S + + + + +L D L NN+ + + ++ Sbjct: 125 SAYYGFLRQKKDKIDINIRAGEFGQKLGDWLVYV--DKAENNSYDNLVLFSNKSLSQESF 182 Query: 187 YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 AQ G+I+ LN H + + F+ L+ + + ++ Sbjct: 183 ILAQKGNINNQNGVFELNLYSGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYLQGT 242 Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 N + + LFP+ + + + Sbjct: 243 DYLGYWKKAFGKNANKNQKRRFSQA----ILVSLFPLASVFLIPLFGIANPRFKTNWSYF 298 Query: 307 PIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + ++ + F + S + + +++ F +F I K+Y Sbjct: 299 YVLGAVGVYFLMVHVISTDLFLMT-----FFFPFIWAFISYLLFRKFILKRY 345 >gi|297624271|ref|YP_003705705.1| permease YjgP/YjgQ family protein [Truepera radiovictrix DSM 17093] gi|297165451|gb|ADI15162.1| permease YjgP/YjgQ family protein [Truepera radiovictrix DSM 17093] Length = 359 Score = 55.8 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 39/347 (11%), Positives = 108/347 (31%), Gaps = 8/347 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQR--INLVSSSTESLNILLKISGYLIPT 59 + F LY++R I + ++ + +L + + ++ + Y IP+ Sbjct: 3 RRFSLYLVREILPLYAAGLTALLILLLGAFLLLEGVLADAVARGVGPALVARFLLYSIPS 62 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 M P +T +++++E+ G S + P+L L +L+S FI+ Sbjct: 63 AAAMGLPLALLFAALLGITRLSQDSEIKAGLLLGLSPRQFLTPILLLGLLVSTVSFINNE 122 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 ++ P ++ + + +E FF + + P ++ + ++ Sbjct: 123 LLAPWSYRRAQEALKDILVQSPETLIEAGSFFTDALGRSVYLGSIAPGGVVRDVTVIQPG 182 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 T + + + +G + + + L ++S+ Sbjct: 183 GTAGPSEVIRAESGVLDEAAGVWRLNGIRMLRYRDGRVVLDAPADEALLPVRGLSASS-- 240 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + L P+ + H++ + F L ++ Sbjct: 241 STPPELTRLPLRELFARLRGTNPQDAPAEWTALHRKFAEPSAAFAFALFALSIGLYS--- 297 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCI 346 R+ +S+ +++ + + + + +L Sbjct: 298 -FRRNFGLGLVSVLFLTFIYYATWSVSNLLGAQGTLPAAVAGWLPFA 343 >gi|213162832|ref|ZP_03348542.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 219 Score = 55.8 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 20/159 (12%), Positives = 55/159 (34%), Gaps = 14/159 (8%) Query: 193 SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLN 252 + Q + LN G + + +D I F++Y + + ++ L N Sbjct: 50 QLRDGSQVVTLNKGTRFEGTALLRDFRITDFQNYQAIIGHQAVALDPNDTDQMDMRTLWN 109 Query: 253 PNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISL 312 + + R+E H R+T + L+ + ++ ++ + ++ Sbjct: 110 TDND----------RARAELHWRITLVFTVFMMALM---VVPLSVVNPRQGRVLSMLPAM 156 Query: 313 SISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + F + I + P+++++ + + L Sbjct: 157 LLYLLFFLIQTSIKSNGGK-GKLDPVIWMWAVNLIYLAL 194 >gi|327405435|ref|YP_004346273.1| permease YjgP/YjgQ family protein [Fluviicola taffensis DSM 16823] gi|327320943|gb|AEA45435.1| permease YjgP/YjgQ family protein [Fluviicola taffensis DSM 16823] Length = 495 Score = 55.8 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 81/203 (39%), Gaps = 1/203 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK ++ ++ G F+++ + + + I+ + + +++++ Y+ + Sbjct: 1 MKKLTVFSIKSFGGPFVVTFFISMVMLIMQFTWVYIDDLMGKGLGVAVIIELMFYVSAGL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+ P + + L ++ N EL + ++G S +++P+ I+++ F N Sbjct: 61 IPLALPLAILLSSIMTLGNLAENNELTALKSSGLSLFRILRPLTQTVIVIATATFFFANY 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + Q L + + + IKI K +NT +GI I D + Sbjct: 121 VIPVANLKWHTIIYDIQETKVGMLLTPGSYTKEIEGYAIKI-KSGKDNTFKGITIHDYTN 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIIL 203 K A SG + L Sbjct: 180 PNVLKTVKADSGIVYKGDDGKYL 202 Score = 41.9 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 31/86 (36%), Gaps = 4/86 (4%) Query: 264 LLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFS 323 + Y+ EFH++ ++ + A A++R+ P+ I+ + F FS Sbjct: 380 NYDLYQIEFHRKFALSGAIIVLFFVG---APLGAIIRKGGFGAPVVIAALLFMVYFVLFS 436 Query: 324 YIIHKIEQN-PYYIPILYLFLFCISS 348 + N P ++L Sbjct: 437 VGQNLATSNDKILSPFWGMWLPTAVL 462 >gi|210135251|ref|YP_002301690.1| integral membrane protein [Helicobacter pylori P12] gi|210133219|gb|ACJ08210.1| integral membrane protein [Helicobacter pylori P12] Length = 345 Score = 55.8 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 121/352 (34%), Gaps = 11/352 (3%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y+ + + F L + FI+ ++ ++ ++ S L+++ Y +P + + P Sbjct: 5 YLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFILP 64 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 F L+ ++ + ELL+ + G S T+ K + L++L+S L + I+ P + Sbjct: 65 ITFFAACALGLSRLSYDHELLVFFSLGVSPKTMTKAFVPLSLLVSAILLVFSLILIPTSK 124 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 S + + + + +L D L NN+ + + ++ Sbjct: 125 SAYYGFLRQKKDKIDINIRAGEFGQKLGDWLVYV--DKAENNSYDNLVLFSNKSLSQESF 182 Query: 187 YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 AQ G+I+ LN + H + + F+ L+ + + ++ Sbjct: 183 ILAQKGNINNQNGVFELNLYKGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDTAYLQGT 242 Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 N + + LFP+ + + + Sbjct: 243 DYLGYWKKAFGKNANKNQKRRFSQA----ILVSLFPLASMFLIPLFGIANPRFKTNWSYF 298 Query: 307 PIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + ++ + F + S + + +++ F +F I K+Y Sbjct: 299 YVLGAVGVYFLMVHVISTDLFLMT-----FFFPFIWAFASYLLFRKFILKRY 345 >gi|15644990|ref|NP_207160.1| hypothetical protein HP0362 [Helicobacter pylori 26695] gi|2313464|gb|AAD07430.1| conserved hypothetical integral membrane protein [Helicobacter pylori 26695] Length = 345 Score = 55.8 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 119/352 (33%), Gaps = 11/352 (3%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y+ + + F L + FI+ ++ ++ ++ S L+++ Y +P + + P Sbjct: 5 YLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFILP 64 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 F L+ ++ + ELL+ + G S + K L++L+S L + I+ P + Sbjct: 65 ITFFAACALGLSRLSYDHELLVFFSLGVSPKKMTKVFAPLSLLVSAILLVFSLILIPTSK 124 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 ST + + + + +L D L NN+ + + ++ Sbjct: 125 STYYGFLRQKKDKIDINIRAGEFGQKLGDWLVYV--DKTKNNSYDNLVLFSNKSLSQESF 182 Query: 187 YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 AQ G+I+ LN H + + F+ L+ + + ++ Sbjct: 183 ILAQKGNINNQNGVFELNLYNGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYLQGT 242 Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 N + + LFP+ + + + Sbjct: 243 DYLGYWKKAFGKNANKNQKRRFSQA----ILVSLFPLASVFLIPLFGIANPRFKTNWSYF 298 Query: 307 PIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + ++ + F + S + + +++ F +F I K+Y Sbjct: 299 YVLGAVGVYFLMVHVISTDLFLMT-----FFFPFIWAFASYLLFRKFILKRY 345 >gi|188527872|ref|YP_001910559.1| hypothetical protein HPSH_05605 [Helicobacter pylori Shi470] gi|188144112|gb|ACD48529.1| hypothetical protein HPSH_05605 [Helicobacter pylori Shi470] Length = 345 Score = 55.8 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 50/352 (14%), Positives = 120/352 (34%), Gaps = 11/352 (3%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y+ + + F L + FI+ ++ ++ ++ S L+++ Y +P + + P Sbjct: 5 YLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFILP 64 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 F L+ ++ + ELL+ + G S + K + L++L+S L + I+ P + Sbjct: 65 ITFFAACALGLSRLSYDHELLVFFSLGVSPKKMTKAFVPLSLLVSAILLVFSLILIPTSK 124 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 S + + + + +L D L NN+ + + ++ Sbjct: 125 SAYYGFLRQKKDKIDINIRAGEFGQKLGDWLVYV--DKAENNSYDNLVLFSNKSLSQESF 182 Query: 187 YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 AQ G+I+ LN H + + F+ L+ + + ++ Sbjct: 183 ILAQKGNINNQNGVFELNLYSGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYLQGT 242 Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 N + + LFP+ + + + Sbjct: 243 DYLGYWKKAFGKNANKNQKRRFSQA----ILVSLFPLASVFLIPLFGIANPRFKTNWSYF 298 Query: 307 PIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + ++ + F + S + + +++ F +F +I K+Y Sbjct: 299 YVLGAVGVYFLMVHVISTDLFLMT-----FFFPFIWAFVSYLLFRKIILKRY 345 >gi|317009699|gb|ADU80279.1| hypothetical protein HPIN_05385 [Helicobacter pylori India7] Length = 345 Score = 55.8 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 120/352 (34%), Gaps = 11/352 (3%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y+ + + F L + FI+ ++ ++ ++ S L+++ Y +P + + P Sbjct: 5 YLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFILP 64 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 F L+ ++ + ELL+ + G S T+ K + L++L+S L + I+ P + Sbjct: 65 ITFFAACALGLSRLSYDHELLVFFSLGVSPKTMTKAFVPLSLLVSAILLVFSLILIPTSK 124 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 S + + + + +L D L NN+ + + ++ Sbjct: 125 SAYYGFLRQKKDKIDINIRAGEFGQKLGDWLVYV--DKAENNSYDNLVLFSNKSLSQESF 182 Query: 187 YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 AQ G+I+ LN H + + F+ L+ + + ++ Sbjct: 183 ILAQKGNINNQNGVFELNLYSGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYLQGT 242 Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 N + + LFP+ + + + Sbjct: 243 DYLGYWKKAFGKNANKNQKRRFSQA----VLVSLFPLASVFLIPLFGIANPRFKTNWSYF 298 Query: 307 PIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + ++ + F + S + + +++ F +F I K+Y Sbjct: 299 YVLGAVGVYFLMVHVISTDLFLMT-----FFFPFIWAFASYLLFRKFILKRY 345 >gi|187918662|ref|YP_001884228.1| hypothetical protein BH0808 [Borrelia hermsii DAH] gi|119861510|gb|AAX17305.1| hypothetical protein BH0808 [Borrelia hermsii DAH] Length = 355 Score = 55.8 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 38/352 (10%), Positives = 113/352 (32%), Gaps = 1/352 (0%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + + I +FL V + + + + S++ ++ I +P Sbjct: 2 KVDKLFVNNISLTFLFMNFLFVILIVLFDLFTNLFTYLDHNLSISDIIYIYYLYLPKCFS 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 F +N++ +++ E++ + + G S +++ ++ L++ +S+ LF +N + Sbjct: 62 DGLALSFLFAVSNLIGNLSMRNEIIGLFSCGISISRILRSIIMLSVFISVLLFFFDNYLV 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + + + + + + I+ + + I+ ++ Sbjct: 122 IDTVTKRDAFLKNSIGSKGANDRNIIIKDFAREIYNIRHYDIENDIIANLMIILKDQNDN 181 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 K Y R + + + + + + E I+L + Sbjct: 182 FKKRYDISKAEWTNSRWRLYGVREFSKVERDVIEKFHEVLDGGGIVNLEPEYIKIIMLSS 241 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 N S L++ + E F + + ++ + V+ + + Sbjct: 242 KTLNFSKLISWIGALRRENLDSSEALFDFFSRIFFSFRLILLSFTVGFVSFALKKNIFIW 301 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 ++ I ++ + FS++ + L LF I + + + Sbjct: 302 SLLNSIAFAVVYVISIM-VFSFLADLGYLPIFVASSLPTILFIIINFVVYNL 352 >gi|115379865|ref|ZP_01466928.1| hypothetical protein STIAU_7243 [Stigmatella aurantiaca DW4/3-1] gi|115363124|gb|EAU62296.1| hypothetical protein STIAU_7243 [Stigmatella aurantiaca DW4/3-1] Length = 315 Score = 55.8 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 30/283 (10%), Positives = 79/283 (27%), Gaps = 10/283 (3%) Query: 82 RNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALT 141 + E+ + +L PV +A+ + L + + + + +++ + Sbjct: 24 KRGEVTALRALTFGPASLYLPVGAVALAACLGLIAFDERVVAQASRRVDEITTQRFNRWG 83 Query: 142 FSY-LEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQA 200 + + + + + + I+ + L+ Sbjct: 84 DWRLYYTPKQWFRRGEHVFFLRSGSAQEGFRDVAILTLTADFKLARRLDADTMVPLEGNR 143 Query: 201 IILNDGEVHRKSPISKD-ISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPN 259 L SP + +S Y L + + + L L + Sbjct: 144 WRLTGVVERSFSPDGRTAVSAAPEAEYDLGVPARSFLIRPGRPEQMRLPEL-REQISART 202 Query: 260 YRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVF 319 Y + R + + L+++ A + R+ I L I+ + Sbjct: 203 EVGLDSRQYELALYNRFAYPMAGLPAALVAVGLALRP--NRKGHLTVAIVEGLLIAMAM- 259 Query: 320 WGFSYIIHKIEQNPYYIPILYLFL----FCISSIFLLMIKKKY 358 WG + + P L +L + + L + ++ + Sbjct: 260 WGLIVVSKTLVTTERMAPGLAAWLPSGVLVVVATVLWLRREGW 302 >gi|34540406|ref|NP_904885.1| hypothetical protein PG0598 [Porphyromonas gingivalis W83] gi|34396719|gb|AAQ65784.1| hypothetical protein PG_0598 [Porphyromonas gingivalis W83] Length = 651 Score = 55.8 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 97/259 (37%), Gaps = 11/259 (4%) Query: 1 MKSF---ELYILRCIGRSFL----MSCLFIVFIAWVIQILQRINLVSSSTESLNILLKIS 53 MK LY+ + ++FL M+ F+ + + + ++ + S IL K+ Sbjct: 1 MKKLPVKRLYLF--MLQTFLPLLLMTFAICWFVVLMQFLWKYVDDMVGKGLSAIILSKML 58 Query: 54 GYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIF 113 Y T++PM P + + ++ ELL + + G ++KP+ F + ++ Sbjct: 59 FYAAMTLVPMALPLGVLLASLMTFGNLGERLELLAMKSAGVPLYRIMKPLFFSVVAIACG 118 Query: 114 LFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGI 173 LFI +N + + + + A+ A + E F+ + ++K + + Sbjct: 119 LFIFQNDLMIQSQVKFYTILFSARRATPELEIPEGSFYNGIRGYNLFVAKKDRRTGMLHD 178 Query: 174 FIVDSRDTQT--HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 ++ +I A SG + +D L ++ + + + T Sbjct: 179 MMIYDHSQGFADARIIVADSGKLKMDEGKTFLTLMLHSGETFQNLRSQQTESNAPTPYMR 238 Query: 232 SANSSTIVLKANDQNLSFL 250 + ++ D N S + Sbjct: 239 ERFRTKEIVIPFDANFSLM 257 Score = 45.4 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 18/125 (14%), Positives = 45/125 (36%), Gaps = 5/125 (4%) Query: 233 ANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVA 292 + ++++ D + + + R + R E+H + T + +IF I Sbjct: 350 LEARSVMINRFDTYIGECMIMKESTAFERDRRISHMR-EWHTKFTYPVACLIFFFIG--- 405 Query: 293 ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIFL 351 A A++R+ PI S+ + ++ + + + ++L F + Sbjct: 406 APLGAIIRKGGLGTPIVASVLFFVLYYMVDTFGVKMAKTEEWPVWLGMWLSTFVLVPFGF 465 Query: 352 LMIKK 356 + K Sbjct: 466 FLTYK 470 >gi|317177843|dbj|BAJ55632.1| hypothetical protein HPF16_1035 [Helicobacter pylori F16] Length = 345 Score = 55.8 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 119/352 (33%), Gaps = 11/352 (3%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y+ + + F L + FI+ ++ ++ ++ S L+++ Y +P + + P Sbjct: 5 YLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFILP 64 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 F L+ ++ + ELL+ + G S + K + L++L+S L + I+ P + Sbjct: 65 ITFFAACALGLSRLSYDHELLVFFSLGVSPKKMTKAFVPLSLLVSAILLVFSLILIPTSK 124 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 S + + + + +L D L NN+ + + S+ Sbjct: 125 SAYYGFLRQKKDKIDINIRAGEFGQKLGDWLVYV--DKAENNSYDNLVLFSSKSLSQESF 182 Query: 187 YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 AQ G+I+ LN H + + F+ L+ + + ++ Sbjct: 183 ILAQKGNINNQNGVFELNLYSGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYLQGT 242 Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 N + + LFP+ + + + Sbjct: 243 DYLGYWEKAFGKNANKNQKRRFSQA----ILVSLFPLASVFLIPLFGIANPRFKTNWSYF 298 Query: 307 PIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + ++ + F + S + + +++ F +F I K+Y Sbjct: 299 YVLGAVGVYFLMVHVISTDLFLMT-----FFFPFIWAFISYLLFRKFILKRY 345 >gi|208435366|ref|YP_002267032.1| hypothetical protein HPG27_1421 [Helicobacter pylori G27] gi|208433295|gb|ACI28166.1| hypothetical protein HPG27_1421 [Helicobacter pylori G27] Length = 355 Score = 55.4 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 43/368 (11%), Positives = 104/368 (28%), Gaps = 23/368 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ + FL+ L + I L+ + + S N+++ Y I L Sbjct: 2 RLFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPD---SANMIILFFTYDILFALN 58 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + + ++ + + + G S+ ++ P+ +++ + Sbjct: 59 YTLPISLLLAMVLFYIAFIKSNQYTALLSIGFSKCQILSPIFLISLFFTAVYVGLNATPF 118 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + L K +L + I R Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYF------DKINPLLQKAQNIKVFRLKD 172 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHR-------KSPISKDISIMKFKSYTLQTESANS 235 YA++ + + IL+D ++ + + FK+ Sbjct: 173 KTLESYAEAKEAFFEDKYWILHDTTIYEMPSSFELGNNALNTTRLKTFKTLKNFRPKVLD 232 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + K LL+ + + P +S++ A Sbjct: 233 TIYQNKPAVSITDALLSLHALVRQNADTKKVRSFL-----YVFAILPFFVPFLSVLIAYF 287 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL--FLFCISSIFLLM 353 + + + + + + I V WG + + K + IP + + F ++ L Sbjct: 288 SPSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFVFLALSLWY 347 Query: 354 IKKKYTKI 361 KK ++ Sbjct: 348 FKKLNKRL 355 >gi|189461471|ref|ZP_03010256.1| hypothetical protein BACCOP_02127 [Bacteroides coprocola DSM 17136] gi|189431805|gb|EDV00790.1| hypothetical protein BACCOP_02127 [Bacteroides coprocola DSM 17136] Length = 635 Score = 55.4 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 78/215 (36%), Gaps = 6/215 (2%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K ++++L+ F + +FI + + + ++ + +N+L + Y T++ Sbjct: 5 KKLDIFVLKSFLLLFAGTFFICLFIFMMQFLWRYVDELVGKGLEINVLAQFFFYSGLTLI 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P+ P + + ELL + G + +I+PV+ + L F +NII Sbjct: 65 PLSLPLAILLAALMTFGNFGERYELLSMKAAGIPLLRIIRPVVLFCVFLGGISFFFQNII 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + L + + E +F+ D I + + L ++ + Sbjct: 125 GPRAQKQLWTLLVSMKQKSPEVDIPEGVFYSDIDGYNIYVKHKDRKTGLLKDILIYNFSD 184 Query: 182 QTHKIYYAQSGS------IDLDRQAIILNDGEVHR 210 + + D + L +GE Sbjct: 185 GFENAHIIWAAEGKLELTADKQHLFLHLYNGEQFE 219 Score = 41.9 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 40/109 (36%), Gaps = 6/109 (5%) Query: 246 NLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKI 305 +LS + + ++RS++HK++T L +IF I A A++R+ Sbjct: 346 SLSTDWDMKSFLTKDTDNSIRSHRSDWHKKITLSLACIIFFFIG---APLGAIIRKGGLG 402 Query: 306 HPIFISLSISFGVFWGFSYI---IHKIEQNPYYIPILYLFLFCISSIFL 351 P+ IS+ I + S E N + + F Sbjct: 403 MPVVISVLIFVIYYIIDSGATRVAKSGEMNIVLGTWMSTIVLAPLGAFF 451 >gi|254669826|emb|CBA04196.1| conserved hypothetical protein [Neisseria meningitidis alpha153] Length = 182 Score = 55.4 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 19/128 (14%), Positives = 44/128 (34%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +IL + + + +L + +P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGKGSYGIWEMLGYTALKMPAR 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + +EL +I +G S L+ + + +I Sbjct: 61 AYELMPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLILSQFGFIFAIATVALGEW 120 Query: 121 IEPKCRST 128 + P Sbjct: 121 VAPTLSQK 128 >gi|34558361|ref|NP_908176.1| permease [Wolinella succinogenes DSM 1740] gi|34484080|emb|CAE11076.1| conserved hypothetical protein-PREDICTED PEMEASE [Wolinella succinogenes] Length = 355 Score = 55.4 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 37/366 (10%), Positives = 110/366 (30%), Gaps = 16/366 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M ++ + F + L + I +L+ + S N+++ Y Sbjct: 1 MSLAFRFLGALYLKYFFILLLALETFFVGIDLLKFAEEL---PPSANLVVLFVVYDALYA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P + + + R EL + + G S+ + P+L +A+L + + Sbjct: 58 LNFILPIALVLAQILLFVVLLRTNELTALLSIGYSKRQITTPLLGIALLFTFGFIVLNAT 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + LF + D Y +G+ + Sbjct: 118 PFAYAKER----VDTILDQGYVGNFKRELFVKYHDSYIYFDKIYPLLQKAEGVKVYRLEG 173 Query: 181 TQTHKIYYAQSGSIDLDRQA----IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + A+ + +++ ++ + F Sbjct: 174 DRVAQWIEAKEARFVDNHWRLNEAMVMTIPSELTLGGSPLEVEKVDFMEVLEGFRPRILD 233 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLF-PVIFGLISIVAADK 295 +I + ++ + + + + + R + + F P+ L++ Sbjct: 234 SIYERHGAVSIIDAI-ESMSLLLEQQVNSQKIRGILYSLVLFPFFAPLCMVLVAYYMPIT 292 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + + + +G+F+ S + +P ++ + L+ ++F Sbjct: 293 MRYGNLAIIVFAAILGVLLFWGLFFALSRLSMSGFIHPEVSLLIPMILWTALALFFW--- 349 Query: 356 KKYTKI 361 ++ ++ Sbjct: 350 RRLARL 355 >gi|154148987|ref|YP_001406533.1| YjgP/YjgQ permease [Campylobacter hominis ATCC BAA-381] gi|153804996|gb|ABS52003.1| putative permease, YjgP/YjgQ family [Campylobacter hominis ATCC BAA-381] Length = 340 Score = 55.4 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 51/363 (14%), Positives = 109/363 (30%), Gaps = 28/363 (7%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M E Y+ +F + I +I LQ + S +L L K+ +++P + Sbjct: 1 MYRAEKYLFSNFLSTFASLFSTLFLIMSIIFFLQIARITSFVEINLYELTKLYLFMLPRI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P F + L +++ E +++ G S + + LFLA ++S+ + + Sbjct: 61 LIFTIPISFFVALAMSLFRLSKENETIVLFTLGYSSEKIARFFLFLAFIVSVSMLLISLF 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI---VD 177 + P + + +++ + + D L + N + Sbjct: 121 MMPLAENLKDNFVSYKKISANLNIKSSEFGQKFSDWLVFIDDQKETNTGSIYENLILYHP 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 T +I A SG I + L + K I F ++T + Sbjct: 181 KNKTSDERIILASSGEIANENSNFSLKLKNGKAYTNDEKKWHISYFDELIIRTVQKDKIK 240 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + + + LFP+ ++ Sbjct: 241 ENGGILGYW----------------KNEKNASKQLSIYVLVSLFPLASIYFAVSFGIVTY 284 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + IF L F + F+ + + L F + + ++K Sbjct: 285 RYEKGFIYIGIFGVLFCYFAMIMIFAK---------QPLLAIPLTFFIFLILSYIFYRQK 335 Query: 358 YTK 360 + Sbjct: 336 IAR 338 >gi|218508596|ref|ZP_03506474.1| putative permease protein [Rhizobium etli Brasil 5] Length = 239 Score = 55.0 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 21/161 (13%), Positives = 53/161 (32%), Gaps = 6/161 (3%) Query: 194 IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK---ANDQNLSFL 250 + D L DG + + + + ++Q + V + A + F Sbjct: 71 LRQDAATAKLEDGYWQLNGVVERKPGEIPLRKASVQLRTNLKQDFVQERLTAPETIGFFD 130 Query: 251 LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFI 310 L+ + ++F+ L+Q L V LI+ + R + I Sbjct: 131 LSNRIAAAKSFGISTKALETQFNSLLSQPLLLVAMTLIAATVSL--KFSRFNQSRSVILG 188 Query: 311 SLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + F ++ + ++ + P + ++ + ++ L Sbjct: 189 GILSGFMLY-VITVLVKAFGSSGVVPPFVATWIPVVVALAL 228 >gi|126664027|ref|ZP_01735021.1| hypothetical protein FBBAL38_12830 [Flavobacteria bacterium BAL38] gi|126623976|gb|EAZ94670.1| hypothetical protein FBBAL38_12830 [Flavobacteria bacterium BAL38] Length = 474 Score = 55.0 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 54/171 (31%) Query: 13 GRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAME 72 +F + + FI + I I ++ L + K + PT++PMV P + Sbjct: 1 MITFTTVFVILFFIFVLQGIWLFIAELAGKDLDLFTIFKFLTFYAPTIVPMVLPLSVLLA 60 Query: 73 TTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQL 132 S N E + ++G S +K + +L++ F N + P + L Sbjct: 61 AIMTFGSFAENYEFAAMKSSGISLQRAMKMLTITIGILALVSFFFANNVIPDAQFRFINL 120 Query: 133 SAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + E F + K N + ++ Sbjct: 121 RKDIVQQKPAMAIVEGQFNTIGTSNIKVDKKTGDNGEFLEGVTMHVKNNNM 171 Score = 45.0 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 22/246 (8%), Positives = 68/246 (27%), Gaps = 4/246 (1%) Query: 112 IFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQ 171 + E+I K + K+ ++ + + D S+ Sbjct: 200 YDGYYYEDIHPKKYEERKRLPFTKSSFKKYVINIDLTKLNQSNIDDGNVTSEKMLTIPEL 259 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTE 231 I + + + + + + K Sbjct: 260 SFTIDTLQKNYNKDVKSYAENIVTRNDNIFQKRQINSTTVQAKTIKKTAPKNIESLFNPT 319 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 + K+N + F + + + + + + + H++ ++ I Sbjct: 320 ELKQILEMAKSNATSSEFSIQSSKTDLEIKAKNIGYHWMAIHEKFVIAYACLLMFFIG-- 377 Query: 292 AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIF 350 A A++R+ PI ++ I + ++ E++ I ++ ++ Sbjct: 378 -APLGAIIRKGGLGLPIVFAMLIFIAFHFINTFGRKLAEESTITPFIGAWMSSIIMTPFA 436 Query: 351 LLMIKK 356 +L+ + Sbjct: 437 ILLTYR 442 >gi|15612456|ref|NP_224109.1| hypothetical protein jhp1391 [Helicobacter pylori J99] gi|4156011|gb|AAD06972.1| putative [Helicobacter pylori J99] Length = 355 Score = 55.0 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 41/367 (11%), Positives = 106/367 (28%), Gaps = 21/367 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ + FL+ L + I L+ + + S N+++ Y I L Sbjct: 2 RLFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPD---SANMIILFFTYDILFALN 58 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + + ++ + + + G S+ ++ P+ +++ + Sbjct: 59 YTLPISLLLAMVLFYITFIKSNQYTALLSIGFSKCQILSPIFLISLFFTAVYVGLNATPF 118 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + L K +L + I R Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYF------DKINPLLQKAQNIKVFRLKD 172 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVH------RKSPISKDISIMKFKSYTLQTESANSS 236 YA++ + + IL+D ++ + + + ++ Sbjct: 173 KTLESYAEAKEAFFEDKYWILHDTTIYEMPLSFELGANALNTTHLETFKTLKNFRPKVLD 232 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 TI +++ L + + + P +S++ A Sbjct: 233 TIYQNKPAVSITDALLSLHALVRQNADTKKVRSF----LYVFAILPFFVPFLSVLIAYFS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL--FLFCISSIFLLMI 354 + + + + + + I V WG + + K + IP + + F ++ L Sbjct: 289 PSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFVFLALSLWYF 348 Query: 355 KKKYTKI 361 KK ++ Sbjct: 349 KKLNKRL 355 >gi|126663513|ref|ZP_01734510.1| hypothetical protein FBBAL38_09194 [Flavobacteria bacterium BAL38] gi|126624461|gb|EAZ95152.1| hypothetical protein FBBAL38_09194 [Flavobacteria bacterium BAL38] Length = 132 Score = 55.0 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 22/135 (16%), Positives = 49/135 (36%), Gaps = 6/135 (4%) Query: 226 YTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIF 285 + E + + +V A + L + + TY F+K+ + + I Sbjct: 1 MSYNFEPDDLTPVVYVAETMTIGQLNSFINKERARGNGNINTYLVVFYKKFSLPISAFIL 60 Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFW---GFSYIIHKIEQNPYYIPILYLF 342 +I++ ++ R+ + I + I+F + F + K P+ Sbjct: 61 TIIAVAV---SSMKRRGGMGINLAIGIVIAFTFIFFDKVFGTLAEKSSIPPFLAVWFPNI 117 Query: 343 LFCISSIFLLMIKKK 357 +F I + +LL K+ Sbjct: 118 VFGILAAYLLRNAKR 132 >gi|319900104|ref|YP_004159832.1| permease YjgP/YjgQ family protein [Bacteroides helcogenes P 36-108] gi|319415135|gb|ADV42246.1| permease YjgP/YjgQ family protein [Bacteroides helcogenes P 36-108] Length = 633 Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 29/205 (14%), Positives = 82/205 (40%), Gaps = 2/205 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K ++++L+ F+ + +FI + + + ++ + + +L + Y T++ Sbjct: 5 KKLDIFVLKSFCMLFMGTFFICLFIFMMQFLWRYVDELIGKGLEMTVLAQFFFYSALTLV 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P+ P + + ELL + G S + +++ ++ L+S F +N+I Sbjct: 65 PVSLPLAILLAALITFGNFGERFELLAMKAAGISLLKIMRSLIVFIALVSCVSFYFQNVI 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ ++ + L + + E +F+ + + + + + ++ + + Sbjct: 125 GPQAQTKLWTLLLSMKQKSPEVDIPEGVFYDEIEGYNLYVKHKDRKTGMLYDVLIYNFEK 184 Query: 182 Q--THKIYYAQSGSIDLDRQAIILN 204 +I A SG +++ L Sbjct: 185 GFENAQIIKADSGKLEMTADKQHLY 209 >gi|317181181|dbj|BAJ58967.1| hypothetical protein HPF32_1385 [Helicobacter pylori F32] Length = 355 Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 41/367 (11%), Positives = 105/367 (28%), Gaps = 21/367 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ + FL+ L + I L+ + + S N+++ Y I L Sbjct: 2 RLFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPD---SANMIILFFTYDILFALN 58 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + + ++ + + + G S+ ++ P+ +++ + Sbjct: 59 YTLPISLLLAMVLFYIAFIKSNQYTALLSIGFSKCQILSPIFLISLFFTAVYVGLNATPF 118 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + L K +L + I R Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYF------DKINPLLQKAQNIKVFRLKD 172 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK------DISIMKFKSYTLQTESANSS 236 YA++ + + IL+D ++ + + + +K Sbjct: 173 KTLESYAEAKEAFFEDKYWILHDTTIYEMPLKFELGANALNTTHLKTFKTLKNFRPKVLD 232 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 TI +++ L + + + P +S++ A Sbjct: 233 TIYQNKPAVSITDALLSLHALVRQNADTKKVRSF----LYVFAILPFFVPFLSVLIAYFS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL--FLFCISSIFLLMI 354 + + + + + + I V WG + + K + IP + + ++ L Sbjct: 289 PSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFLVFLALSLWYF 348 Query: 355 KKKYTKI 361 KK ++ Sbjct: 349 KKLNKRL 355 >gi|332674268|gb|AEE71085.1| conserved hypothetical protein [Helicobacter pylori 83] Length = 355 Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 44/367 (11%), Positives = 110/367 (29%), Gaps = 21/367 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ + FL+ L + I L+ + + S N+++ Y I L Sbjct: 2 RLFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPD---SANMIILFFTYDILFALN 58 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + + ++ + + + G S+ ++ P+ +++ + Sbjct: 59 YTLPISLLLAMVLFYIAFIKSNQYTALLSIGFSKCQILSPIFLISLFFTAVYVGLNATPF 118 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + L K +L + I R Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYF------DKINPLLQKAQNIKVFRLKD 172 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVH------RKSPISKDISIMKFKSYTLQTESANSS 236 YA++ + + IL+D ++ + + + +K Sbjct: 173 KTLESYAEAKEAFFEDKYWILHDTTIYEMPLSFELGNNALNTTHLKTFKTLKNFRPKVLD 232 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 TI +++ L + + + + RS + P +S++ A Sbjct: 233 TIYQNKPAVSITDAL-LSLHALMRQNADTKKVRS---FLYVFAILPFFVPFLSVLIAYFS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL--FLFCISSIFLLMI 354 + + + + + + I V WG + + K + IP + + F ++ L Sbjct: 289 PSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFLFLALSLWYF 348 Query: 355 KKKYTKI 361 KK ++ Sbjct: 349 KKLNKRL 355 >gi|120436531|ref|YP_862217.1| permease [Gramella forsetii KT0803] gi|117578681|emb|CAL67150.1| permease [Gramella forsetii KT0803] Length = 459 Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 36/238 (15%), Positives = 81/238 (34%), Gaps = 13/238 (5%) Query: 24 VFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRN 83 +FI + I I ++ ++LK Y P ++P+V P + + S N Sbjct: 1 MFIFVLQTIWLYIGELAGKDLDAEVILKFLLYFSPKLVPLVLPLTILLTSIMTFGSFAEN 60 Query: 84 TELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFS 143 E + ++G S ++ + + +S F N + P L Sbjct: 61 YEFAAMKSSGISLGRAMRSLTVFIVFISFVAFFFANNVIPAAEFKSINLRKNIAQLKPAM 120 Query: 144 YLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT--QTHKIYYAQSGSI----DLD 197 + E +F + K N+ I+ + + A+ G + + D Sbjct: 121 AISEGIFNDIGTFNIKVEDKTGENDQYLTDVIIHQKKQTGGNTTVIKAKEGELVGSTESD 180 Query: 198 RQAIILNDGEVHR-------KSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLS 248 ++IL +G + +K + F Y + + ++ + + L+ + + Sbjct: 181 VLSLILKEGNYYDEIKPSDYDKRKNKPFTKSYFDEYVINIDLSDFNNVNLEDESYSST 238 Score = 48.1 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 8/104 (7%), Positives = 36/104 (34%), Gaps = 6/104 (5%) Query: 255 PNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSI 314 + + + H++ + ++ + A A++R+ PI +++ + Sbjct: 326 KQEFKRNVQQVNKFEIALHEKYALSIACIVLFFVG---APLGAIIRKGGIGLPIVVAILL 382 Query: 315 SFGVFWGFSYIIHKIEQNPYYIPILYLFL--FCISSIFLLMIKK 356 + + + ++ + +L F + + + + + Sbjct: 383 FLTYHFIGIFAKNSA-EDGSVPAFVATWLSTFIMLPLGIYLTYR 425 >gi|257459022|ref|ZP_05624141.1| permease YjgP/YjgQ [Campylobacter gracilis RM3268] gi|257443407|gb|EEV18531.1| permease YjgP/YjgQ [Campylobacter gracilis RM3268] Length = 348 Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 46/357 (12%), Positives = 96/357 (26%), Gaps = 10/357 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y + F + + + I +L + S S N L Sbjct: 1 MKLYVKYAALSYLKYFFILLIALECFYVGIDVLTNLKDFPS---SANTALLYIALTAAVA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + +M R+ EL+ G S+ LI P +A+ ++ + Sbjct: 58 LSYTLPLSLIFALILMGFNMIRSNELVSFYALGVSKNALIIPPFLIALAITASFIALNST 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 K L+ + E + + + N S Sbjct: 118 PFAYALKFQKNLTDLSPTGGDMFLKFEGKYIYIKALNGKNANDITIFNIGDNSVASRSHA 177 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + K S S + +S L+ +S V Sbjct: 178 SSGEYAGKIWHLRDVNTTTLPT------QLKLGGSGLKSKLSAQSEALKGFDPSSIASVY 231 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD-KRALV 299 ++ + +++ + T ++ + + LF + L+ Sbjct: 232 DTSNVYSIRDALRSIRTFSHQGVNISTIKASLYNMIFFPLFAPLAVLVLYYYLPVTGRFF 291 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 FI+ ++GV + P + I+ + + FL+ + Sbjct: 292 NLALLSFGFFIATLCAWGVLFVLIRFSLNGVIIPEFGIIVPIIALLGFAAFLVFKHR 348 >gi|317182703|dbj|BAJ60487.1| hypothetical protein HPF57_1413 [Helicobacter pylori F57] Length = 355 Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 43/368 (11%), Positives = 104/368 (28%), Gaps = 23/368 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ + FL+ L + I L+ + + S N+++ Y I L Sbjct: 2 RLFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPD---SANMIILFFTYDILFALN 58 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + + ++ + + + G S+ ++ P+ +++ + Sbjct: 59 YTLPISLLLAMVLFYIAFIKSNQYTALLSIGFSKCQILSPIFLISLFFTTVYVGLNATPF 118 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + L K +L + I R Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYF------DKINPLLQKAQNIKVFRLKD 172 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHR-------KSPISKDISIMKFKSYTLQTESANS 235 YA++ + + IL+D ++ + + FK+ Sbjct: 173 KTLESYAEAKEAFFEDKYWILHDTIIYEMPLSFELGNNALNTTHLKTFKTLKNFRPKVLD 232 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + K LL+ + + P +S++ A Sbjct: 233 TIYQNKPAVSITDALLSLHALVRQNADTKKVRSFL-----YVFAILPFFVPFLSVLIAYF 287 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL--FLFCISSIFLLM 353 + + + + + + I V WG + + K + IP + + F ++ L Sbjct: 288 SPSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFVFLALSLWY 347 Query: 354 IKKKYTKI 361 KK ++ Sbjct: 348 FKKLNKRL 355 >gi|254780008|ref|YP_003058115.1| putative permease; putative membrane protein [Helicobacter pylori B38] gi|254001921|emb|CAX30174.1| Putative permease; putative membrane protein [Helicobacter pylori B38] Length = 355 Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 44/367 (11%), Positives = 110/367 (29%), Gaps = 21/367 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ + FL+ L + I L+ + + S N+++ Y I L Sbjct: 2 RLFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPD---SANMIILFFTYDILFALN 58 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + S ++ + + + G S+ ++ P+ +++ + Sbjct: 59 YTLPISLLLAMVLFYISFIKSNQYTALLSIGFSKCQILSPIFLISLFFTAVYVGLNATPF 118 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + L K +L + I R Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYF------DKINPLLQKAQNIKVFRLKD 172 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVH------RKSPISKDISIMKFKSYTLQTESANSS 236 YA++ + + IL+D ++ + + + ++ Sbjct: 173 KTLESYAEAKEAFFEDKYWILHDTTIYEMPLSFELGANALNTTRLETFKTLKNFRPKVLD 232 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 TI +++ L + + + + RS + P +S++ A Sbjct: 233 TIYQNKPAVSITDAL-LSLHALMRQNADTKKVRS---FLYVFAILPFFVPFLSVLIAYFS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL--FLFCISSIFLLMI 354 + + + + + + I V WG + + K + IP + + F ++ L Sbjct: 289 PSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFVFLALSLWYF 348 Query: 355 KKKYTKI 361 KK ++ Sbjct: 349 KKLNKRL 355 >gi|308185268|ref|YP_003929401.1| hypothetical protein HPSJM_07640 [Helicobacter pylori SJM180] gi|308061188|gb|ADO03084.1| hypothetical protein HPSJM_07640 [Helicobacter pylori SJM180] Length = 355 Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 42/367 (11%), Positives = 105/367 (28%), Gaps = 21/367 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ + FL+ L + I L+ + + S N+++ Y I L Sbjct: 2 RLFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPD---SANMIILFFTYDILFALN 58 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + + ++ + + + G S+ ++ P+ +++ + Sbjct: 59 YTLPISLLLAMVLFYITFIKSNQYTALLSIGFSKCQILNPIFLISLFFTAVYVGLNATPF 118 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + L K +L + I R Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYF------DKINPLLQKAQNIKVFRLKD 172 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVH------RKSPISKDISIMKFKSYTLQTESANSS 236 YA++ + + IL+D ++ + + +K Sbjct: 173 KTLESYAEAKEAFFEDKYWILHDTTIYEMPLSFELGANALSTTRLKTFKTLKNFRPKVLD 232 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 TI +++ L + + + P +S++ A Sbjct: 233 TIYQNKPAVSITDALLSLHALVRQNADTKKVRSF----LYVFAILPFFVPFLSVLIAYFS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL--FLFCISSIFLLMI 354 + + + + + + I V WG + + K + IP + + F ++ L Sbjct: 289 PSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFVFLALSLWYF 348 Query: 355 KKKYTKI 361 KK ++ Sbjct: 349 KKLNKRL 355 >gi|216263568|ref|ZP_03435563.1| putative permease, YjgP/YjgQ family protein [Borrelia afzelii ACA-1] gi|215980412|gb|EEC21233.1| putative permease, YjgP/YjgQ family protein [Borrelia afzelii ACA-1] Length = 333 Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 37/334 (11%), Positives = 100/334 (29%), Gaps = 1/334 (0%) Query: 24 VFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRN 83 + + + + + SL + I +P F +N++ +++ Sbjct: 1 MILIILGDLFVNLLNFLEKNISLKDIFYIYYLYLPKAFSDGVALSFLFAISNLIGNLSMR 60 Query: 84 TELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFS 143 E++ + + G +++P++ +++ +S+ LF +N + + L + Sbjct: 61 NEIIGLFSCGVPLTRILRPIILISVFISVVLFFFDNYLVIDTVAKRDLLIKNSIGNNGSI 120 Query: 144 YLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIIL 203 + + IK + N + I+ + Y ++ + Sbjct: 121 DKTIIIRDLAREIYNIKSYDIDENAFSNLMIIIKDSKDEFQTRYDINKAEWKDNKWKLYG 180 Query: 204 NDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPE 263 V I ++ + + ++ E T++L + N + L+N + Sbjct: 181 IREFVKVGRKIKENAYDVLDGTGIIKLEPDYIRTVMLSSKALNFTKLIN-WISFLKSEHL 239 Query: 264 LLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFS 323 + R+ ++ A + + FS Sbjct: 240 NYSDALFDLLNRIFFSFRLMLLSFTVGFIALALKKNIFILSLLNSIAFAVVYVISIVIFS 299 Query: 324 YIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 ++ N Y F I + + I +K Sbjct: 300 FLADLGYLNIYVASSFTTIFFLIINFLVYRIVRK 333 >gi|295134703|ref|YP_003585379.1| permease [Zunongwangia profunda SM-A87] gi|294982718|gb|ADF53183.1| permease [Zunongwangia profunda SM-A87] Length = 407 Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 18/147 (12%), Positives = 47/147 (31%), Gaps = 9/147 (6%) Query: 215 SKDISIMKFKSYTLQTESANSSTIVLKANDQNLS---FLLNPNPNNPNYRPELLETYRSE 271 + FK L ++N S ++ + + L+ L Y Sbjct: 233 EESDKYKSFKHSILDNYNSNQSQRIVDDAIRTTNAAISHLSIKKQEFKQSSRRLNKYEIA 292 Query: 272 FHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ 331 H++ + ++ + A A++R+ P+ I++ I F + + Sbjct: 293 LHEKYVLAVACIVLFFVG---APLGAIIRKGGMGLPMVIAI-IIFLSYHFIGIFAKNSAE 348 Query: 332 NPYYIPILYLFL--FCISSIFLLMIKK 356 + P + +L + + + + Sbjct: 349 DGSISPFIATWLSTLIMLPLGIYFTYR 375 >gi|108563840|ref|YP_628156.1| hypothetical protein HPAG1_1415 [Helicobacter pylori HPAG1] gi|107837613|gb|ABF85482.1| hypothetical protein HPAG1_1415 [Helicobacter pylori HPAG1] Length = 355 Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 44/368 (11%), Positives = 104/368 (28%), Gaps = 23/368 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ + FL+ L + I L+ + + S N+++ Y I L Sbjct: 2 RLFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPD---SANMIILFFTYDILFALN 58 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + S ++ + + + G S+ ++ P+ +++ + Sbjct: 59 YTLPISLLLAMVLFYISFIKSNQYTALLSIGFSKCQILSPIFLISLFFTAVYVGLNATPF 118 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + L K +L + I R Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYF------DKINPLLQKAQNIKVFRLKD 172 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHR-------KSPISKDISIMKFKSYTLQTESANS 235 YA++ + + IL+D ++ + + FK+ Sbjct: 173 RTLESYAEAKEAFFEDKYWILHDTTIYEMPLKFELGTNALNATRLKTFKTLKNFRPKVLD 232 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + K LL+ + + P +S++ A Sbjct: 233 TIYQNKPAVSITDALLSLHALVRQNADTKKVRSFL-----YVFAILPFFVPFLSVLIAYF 287 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL--FLFCISSIFLLM 353 + + + + + + I V WG + + K + IP + + F ++ L Sbjct: 288 SPSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFIFLALSLWY 347 Query: 354 IKKKYTKI 361 KK ++ Sbjct: 348 FKKLNKRL 355 >gi|317014913|gb|ADU82349.1| hypothetical protein HPGAM_07880 [Helicobacter pylori Gambia94/24] Length = 355 Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 42/367 (11%), Positives = 107/367 (29%), Gaps = 21/367 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ + FL+ L + I L+ + + S N+++ Y I L Sbjct: 2 RLFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPD---SANMIILFFTYDILFALN 58 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + + ++ + + + G S+ ++ P+ F+++ + Sbjct: 59 YTLPISLLLAMVLFYITFIKSNQYTALLSIGFSKRQILNPIFFISLFFTAVYVGLNATPF 118 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + L K +L + I R Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYF------DKINPLLQKAQNIKVFRLKD 172 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVH------RKSPISKDISIMKFKSYTLQTESANSS 236 YA++ + + IL+D ++ + + + ++ Sbjct: 173 RTLESYAEAKEAFFEDKYWILHDTTIYEMPLSFELGANALNTTRLETFKTLKNFRPKVLD 232 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 TI +++ L + + + P +S++ A Sbjct: 233 TIYQNKPAVSITDALFSLHALVRQNADTKKVRSF----LYVFAILPFFVPFLSVLIAYFS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL--FLFCISSIFLLMI 354 + + + + + + I V WG + + K + IP + + F ++ L Sbjct: 289 PSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFLFLALSLWYF 348 Query: 355 KKKYTKI 361 KK ++ Sbjct: 349 KKLNKRL 355 >gi|207091759|ref|ZP_03239546.1| hypothetical protein HpylHP_01146 [Helicobacter pylori HPKX_438_AG0C1] Length = 355 Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 45/367 (12%), Positives = 110/367 (29%), Gaps = 21/367 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ + FL+ L + I L+ + + S N+++ Y I L Sbjct: 2 RLFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPD---SANMIILFFTYDILFALN 58 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + S ++ + + + G S+ ++ P+ +++ + Sbjct: 59 YTLPISLLLAMVLFYISFIKSNQYTALLSIGFSKCQILSPIFLISLFFTAVYVGLNATPF 118 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + L K +L + I R Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYF------DKINPLLQKAQNIKVFRLKD 172 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK------DISIMKFKSYTLQTESANSS 236 YA++ + + IL+D ++ + + + +K Sbjct: 173 KTLESYAEAKEAFFEDKYWILHDTTIYEMPLKFELGANALNATRLKTFKTLKNFRPKVLD 232 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 TI +++ L + + + + RS + P +S++ A Sbjct: 233 TIYQNKPAVSITDAL-LSLHALMRQNADTKKVRS---FLYVFAILPFFVPFLSVLIAYFS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL--FLFCISSIFLLMI 354 + + + + + + I V WG + + K + IP + + F ++ L Sbjct: 289 PSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFIFLALSLWYF 348 Query: 355 KKKYTKI 361 KK ++ Sbjct: 349 KKLNKRL 355 >gi|297250819|ref|ZP_06934296.1| permease, YjgP/YjgQ family [Neisseria polysaccharea ATCC 43768] gi|296837907|gb|EFH21845.1| permease, YjgP/YjgQ family [Neisseria polysaccharea ATCC 43768] Length = 181 Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 19/128 (14%), Positives = 45/128 (35%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M YI+R + + + L + + +I+ + + + + L + +P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEIINEVGNLGKGSYNGAKLGQYVLMQMPAH 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + P + L+ + +EL +I +G S L+ + ++ +I Sbjct: 61 AYELMPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLILSQFGLIFAIATAALGEW 120 Query: 121 IEPKCRST 128 I P Sbjct: 121 IAPALSQK 128 >gi|307638154|gb|ADN80604.1| Permease [Helicobacter pylori 908] gi|325996753|gb|ADZ52158.1| Permease [Helicobacter pylori 2018] gi|325998348|gb|ADZ50556.1| hypothetical protein hp2017_1432 [Helicobacter pylori 2017] Length = 355 Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 44/367 (11%), Positives = 111/367 (30%), Gaps = 21/367 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ + FL+ L + I L+ + + S N+++ Y I L Sbjct: 2 RLFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPD---SANMIILFFTYDILFALN 58 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + + ++ + + + G S+ ++ P+ F+++ + Sbjct: 59 YTLPISLLLAMVLFYITFIKSNQYTALLSIGFSKRQILNPIFFISLFFTAVYVGLNATPF 118 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + L K +L + I R Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYF------DKINPLLQKAQNIKVFRLKD 172 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVH------RKSPISKDISIMKFKSYTLQTESANSS 236 YA++ + + IL+D ++ + + + ++ Sbjct: 173 KTLESYAEAKEAFFEDKYWILHDTTIYEMPLSFELGANALNTTRLETFKTLKNFRPKVLD 232 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 TI +++ L + + + + RS + P +S++ A Sbjct: 233 TIYQNKPAVSITDAL-LSLHALMRQNADTKKVRS---FLYVFAILPFFVPFLSVLIAYFS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL--FLFCISSIFLLMI 354 + + + + + + I V WG + + K + IP + + F ++ L Sbjct: 289 PSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFLFLALSLWYF 348 Query: 355 KKKYTKI 361 KK ++ Sbjct: 349 KKLNKRL 355 >gi|288817926|ref|YP_003432273.1| hypothetical protein HTH_0610 [Hydrogenobacter thermophilus TK-6] gi|288787325|dbj|BAI69072.1| hypothetical protein HTH_0610 [Hydrogenobacter thermophilus TK-6] gi|308751524|gb|ADO45007.1| permease YjgP/YjgQ family protein [Hydrogenobacter thermophilus TK-6] Length = 352 Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 49/355 (13%), Positives = 113/355 (31%), Gaps = 6/355 (1%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 Y+L + F++ ++ I + + + L S NI + L+P Sbjct: 2 LGKYVLFFYIKLFIVVNAILLGIVSSYALAELLFLFKEK--SANIAISYLLNLLPISFFY 59 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 + PF + +L + LI+ + G S + + ++ + +S F I + P Sbjct: 60 LLPFSAVITMMILLKHIFSKKLDLIVQSFGVSPLKFLLNIILFLVFVSFFNLIMSFDVYP 119 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + + + + L + ++ +I ++ I ++ Sbjct: 120 ESNKNLYSIEKEFKKRQEVEDLIVRNAWFFKEESGERIYINFQFVDIKDGNIAGVFLVKS 179 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 K + I DR + + + + K +++ ++ + + Sbjct: 180 SKSNILEV--IQSDRGSWKGDIILLPIAKVWNIKEGNFVAKGISIKLFEIKNAQPIGEKV 237 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 + L + Y SE +R L P+ G+ + A KR + Sbjct: 238 EHISLHQLLLLYSLGKRVGLNYHLYLSEIIRRFLSSLSPIAIGITVMSYAIKRRSILAG- 296 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + + F + + NP Y Y+ L +S L + K + Sbjct: 297 -FLSFVPAFFFYWFSFVLTRFFSESVSFNPLYGLFAYIPLVILSLKGLYYLGKGF 350 >gi|319760185|ref|YP_004124123.1| putative permease [Candidatus Blochmannia vafer str. BVAF] gi|318038899|gb|ADV33449.1| putative permease [Candidatus Blochmannia vafer str. BVAF] Length = 371 Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 44/353 (12%), Positives = 109/353 (30%), Gaps = 11/353 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 YI++ + R+ L+ + + + ++++ + + + ++ IP + Sbjct: 2 ILIRYIIKEVFRNQLIILILLFLVCICQKLIKIVG--VDNPIPVYLIFLHLTLNIPELGK 59 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 +V PF + + + E+L + + +R +K + +I++ I I+ + Sbjct: 60 LVIPFSLFLSVFITCYRFHLHNEILAMYSCAINRFFFVKSIFLYSIIVFIISLINVMWLS 119 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P C + + L E F + + K N LQ IFIV Sbjct: 120 PYCEQLRYVTLSSINKNIYSIKLVEKKFLLMLSKHTVFFIKKIKNKNLQYIFIVKKNHHI 179 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 I + + + + S + + + + Sbjct: 180 NGSNVCV---IITANNGDVYNYSNNLKAITLKSGTYYEIHYDQLIFTNIYISDFSRYHTL 236 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETY------RSEFHKRLTQWLFPVIFGLISIVAADKR 296 D N+ + L + E + R T + +I +I+++ Sbjct: 237 IDYNMKSPQKGFKIVEHMTISQLICHDSLPEKYIELNWRFTLLVSIIIMPIIALLLVINI 296 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 + + I + + I + Y+ + + F I+ + Sbjct: 297 SNGYFLNFVLAISLYILFFMLHILLRFSITLDYRDSMLYMGGVNVIYFIIALL 349 >gi|325287934|ref|YP_004263724.1| permease YjgP/YjgQ family protein [Cellulophaga lytica DSM 7489] gi|324323388|gb|ADY30853.1| permease YjgP/YjgQ family protein [Cellulophaga lytica DSM 7489] Length = 478 Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 37/251 (14%), Positives = 81/251 (32%), Gaps = 6/251 (2%) Query: 24 VFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRN 83 + I I I ++ L I+ K Y +P+++ V P + + ++ N Sbjct: 1 MLIFIFQTIWLYIGDLAGKGLDLEIIGKFIFYFMPSLIDKVLPLTVVLSSILTFGTLAEN 60 Query: 84 TELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFS 143 E + +G S ++ ++ + L + F N + P I L + Sbjct: 61 YEFAAMKASGISLQRAMRTIIIFVLFLGVVAFFFANNVAPAAAHKIYNLKRNIGNVKPAA 120 Query: 144 YLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ--THKIYYAQSGSIDLDRQAI 201 + E +F + K N+ I+ + ++ + A+ G + + Sbjct: 121 IIAEGIFSDFEGMNIKVDKKSGENDRFLENIIIHKKSNNVISNVVIKAKKGELVSSEDSD 180 Query: 202 ----ILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNN 257 IL DG + + +K + + + +DQ+L N + Sbjct: 181 IVQLILKDGNYYEDVQSKNSKTKLKVPFAKAKFNEYIINIQLTDMSDQDLEEDRNVDTEK 240 Query: 258 PNYRPELLETY 268 L+ Sbjct: 241 MKKVSRLIVDI 251 Score = 50.8 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 7/106 (6%), Positives = 36/106 (33%), Gaps = 4/106 (3%) Query: 252 NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFIS 311 + + + + + H + +I + A A++R+ P+ I+ Sbjct: 344 SARKKELDIKYQRYNIHILALHSKYALAFSCIILFFVG---APLGAIIRKGGMGLPMVIA 400 Query: 312 LSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFLLMIKK 356 + + ++ ++ + + + ++ + + + + + Sbjct: 401 IILFLAYYFLGVFVGNSAKVGKIPPALAAWIPTLVMLPLGVFLTIR 446 >gi|308183601|ref|YP_003927728.1| hypothetical protein HPPC_07350 [Helicobacter pylori PeCan4] gi|308065786|gb|ADO07678.1| hypothetical protein HPPC_07350 [Helicobacter pylori PeCan4] Length = 355 Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 43/368 (11%), Positives = 103/368 (27%), Gaps = 23/368 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ + FL+ L + I L+ + + S N+++ Y I L Sbjct: 2 RLFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPD---SANMIILFFTYDILFALN 58 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + + ++ + + + G S+ ++ P+ +++ + Sbjct: 59 YTLPISLLLAMVLFYITFIKSNQYTALLSIGFSKCQILSPIFLISLFFTAVYVGLNATPF 118 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + L K +L + I R Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYF------DKINPLLQKAQNIKVFRLKD 172 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHR-------KSPISKDISIMKFKSYTLQTESANS 235 YA++ + IL+D ++ + + FK+ Sbjct: 173 KTLESYAEAKEAFFKDKYWILHDTTIYEMPLSFELGNNALNTTRLKTFKTLKNFRPKVLD 232 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + K LL+ + + P +S++ A Sbjct: 233 TIYQNKPAVSITDALLSLHALMRQNADTKKVRSFL-----YVFAILPFFVPFLSVLIAYF 287 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL--FLFCISSIFLLM 353 + + + + + + I V WG + + K + IP + + F ++ L Sbjct: 288 SPSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFLFLALSLWY 347 Query: 354 IKKKYTKI 361 KK ++ Sbjct: 348 FKKLNKRL 355 >gi|109948225|ref|YP_665453.1| hypothetical protein Hac_1758 [Helicobacter acinonychis str. Sheeba] gi|109715446|emb|CAK00454.1| conserved hypothetical protein [Helicobacter acinonychis str. Sheeba] Length = 355 Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 43/361 (11%), Positives = 98/361 (27%), Gaps = 9/361 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ + FL+ L + I L+ + + S N+++ Y I L Sbjct: 2 RLFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPD---SANMIILFFTYDILFALN 58 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + + ++ + + + G S+ ++KP+ F+++ + Sbjct: 59 YTLPISLLLAMVLFYITFIKSNQYTALLSIGFSKCQVLKPIFFISLFFTAIYVGLNATPF 118 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + L K +L I N + ++ Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYDDDYVYFGKIDPLLQKAQNIKVFRLKDKTLESY 178 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 G A I + + ++ TI Sbjct: 179 AEANEAFFEGKHWTLHDATIYSLPLNFDLGNNALSAMHLETFKTLKNFRPKVLDTIYQNK 238 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 ++ L + + + + P +S+ A + + Sbjct: 239 PAVSIMDALFSLHALVRQKADTKKVRSF----LYVFAILPFFVPFLSVFIAYFSPSLARY 294 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP--ILYLFLFCISSIFLLMIKKKYTK 360 + + + + I V WG + + K + IP + L F I L KK + Sbjct: 295 ENLALLGLKFIIITLVVWGLFFALGKFSISGILIPELGVLLPFFLFLIISLWYFKKLNKR 354 Query: 361 I 361 + Sbjct: 355 L 355 >gi|32491206|ref|NP_871460.1| hypothetical protein WGLp457 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166413|dbj|BAC24603.1| yjgQ [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 352 Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 53/334 (15%), Positives = 121/334 (36%), Gaps = 7/334 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + YI I ++ +++ ++ I+ +I+ ++I + +S S+ L+ +P + Sbjct: 4 ILDRYIRSLIFKTTIVALFILLTISGIIKFSEKIQSIDNSYISIFYLISTILLSVPKDIE 63 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 + + + +N EL+II+++G SRI + ++ I+ I I Sbjct: 64 EFFNISILIGILWSIGILEKNRELIIIESSGISRIKICILIIKTIIIFLFIYSIILEWII 123 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + K++ F + + ++ +I I K + +QGI+I + Sbjct: 124 P------IEKKIKSKYFFNFISENKKNLWIKINNNFILIKKIVDFDFIQGIYIYEFNKFN 177 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 K + +I +++ I+ + + + +I+ + YT + I+ Sbjct: 178 EIKYIKSSKYAIFKNKEWIMFDVKTIKFNNNKKIEINSFDKQIYTNIITPKEINLILFPT 237 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + ++S L + Y F ++ + +I +I + Sbjct: 238 EELSISELYFYIKFLKKNNLYYKKQYLV-FWNKIFSPISILIITIIILQLLFGILYSYDI 296 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 K ISL F + I P Y Sbjct: 297 KIKVVFVISLGFIFYFINNIFNSLIMIYDYPEYF 330 >gi|317178203|dbj|BAJ55992.1| hypothetical protein HPF16_1395 [Helicobacter pylori F16] Length = 355 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 43/368 (11%), Positives = 104/368 (28%), Gaps = 23/368 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ + FL+ L + I L+ + + S N+++ Y I L Sbjct: 2 RLFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPD---SANMIILFFTYDILFALN 58 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + + ++ + + + G S+ ++ P+ +++ + Sbjct: 59 YTLPISLLLAMVLFYIAFIKSNQYTALLSIGFSKCQILSPIFLISLFFTAVYVGLNATPF 118 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + L K +L + I R Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYF------DKINPLLQKAQNIKVFRLKD 172 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHR-------KSPISKDISIMKFKSYTLQTESANS 235 YA++ + + IL+D ++ + + FK+ Sbjct: 173 KTLESYAEAKEAFFEDKYWILHDTIIYEMPLSFELGNNALNATHLKTFKTLKNFRPKVLD 232 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + K LL+ + + P +S++ A Sbjct: 233 TIYQNKPAVSITDALLSLHALVRQNADTKKVRSFL-----YVFAILPFFVPFLSVLIAYF 287 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL--FLFCISSIFLLM 353 + + + + + + I V WG + + K + IP + + F ++ L Sbjct: 288 SPSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFVFLALSLWY 347 Query: 354 IKKKYTKI 361 KK ++ Sbjct: 348 FKKLNKRL 355 >gi|326562956|gb|EGE13238.1| putative ABC transporter permease protein YjgP/YjgQ [Moraxella catarrhalis 46P47B1] Length = 267 Score = 53.9 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 14/134 (10%), Positives = 42/134 (31%), Gaps = 4/134 (2%) Query: 227 TLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFG 286 TL + + + D +LS L + ++ + F ++L + Sbjct: 137 TLPIAPTDVYLLTKEPEDLSLSSLY-AHRQLMAHQGTRSLRHELAFWQKLLSPFAVLSLV 195 Query: 287 LISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCI 346 L++ R + + ++L + ++ L + Sbjct: 196 LVASSFVFGSL--RSQGLGLRVVLALLTGLLFSYLTDLTGFVALATGLSPLLMALVPIVL 253 Query: 347 SSI-FLLMIKKKYT 359 S++ + ++ +K + Sbjct: 254 SAMAGMYLLNRKSS 267 >gi|297380647|gb|ADI35534.1| Hypothetical protein HPV225_1517 [Helicobacter pylori v225d] gi|308064258|gb|ADO06145.1| hypothetical protein HPSAT_07215 [Helicobacter pylori Sat464] Length = 355 Score = 53.9 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 44/367 (11%), Positives = 110/367 (29%), Gaps = 21/367 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ + FL+ L + I L+ + + S N+++ Y I L Sbjct: 2 RLFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPD---SANMIILFFTYDILFALN 58 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + + ++ + + + G S+ ++ P+ +++ + Sbjct: 59 YTLPISLLLAMVLFYIAFIKSNQYTALLSIGFSKCQILSPIFLISLFFTTVYVGLNATPF 118 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + L K +L + I R Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYF------DKINPLLQKAQNIKVFRLKD 172 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK------DISIMKFKSYTLQTESANSS 236 YA++ + + IL+D ++ + + + +K Sbjct: 173 KTLESYAEAKEAFFEDKYWILHDTTIYEMPLSFELGANALNTTRLKTFKTLKNFRPKVLD 232 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 TI +++ L + + + + RS + P +S++ A Sbjct: 233 TIYQNKPAVSITDAL-LSLHALMRQNADTKKVRS---FLYVFAILPFFVPFLSVLIAYFS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL--FLFCISSIFLLMI 354 + + + + + + I V WG + + K + IP + + F ++ L Sbjct: 289 PSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFLFLALSLWYF 348 Query: 355 KKKYTKI 361 KK ++ Sbjct: 349 KKLNKRL 355 >gi|188528269|ref|YP_001910956.1| hypothetical protein HPSH_07675 [Helicobacter pylori Shi470] gi|188144509|gb|ACD48926.1| hypothetical protein HPSH_07675 [Helicobacter pylori Shi470] gi|308062762|gb|ADO04650.1| hypothetical protein HPCU_07550 [Helicobacter pylori Cuz20] Length = 355 Score = 53.9 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 44/367 (11%), Positives = 110/367 (29%), Gaps = 21/367 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ + FL+ L + I L+ + + S N+++ Y I L Sbjct: 2 RLFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPD---SANMIILFFTYDILFALN 58 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + + ++ + + + G S+ ++ P+ +++ + Sbjct: 59 YTLPISLLLAMVLFYIAFIKSNQYTALLSIGFSKCQILSPIFLISLFFTAVYVGLNATPF 118 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + L K +L + I R Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYF------DKINPLLQKAQNIKVFRLKD 172 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK------DISIMKFKSYTLQTESANSS 236 YA++ + + IL+D ++ + + + +K Sbjct: 173 KTLESYAEAKEAFFEDKYWILHDTTIYEMPLSFELGANALNTTRLKTFKTLKNFRPKVLD 232 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 TI +++ L + + + + RS + P +S++ A Sbjct: 233 TIYQNKPAVSITDAL-LSLHALMRQNADTKKVRS---FLYVFAILPFFVPFLSVLIAYFS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL--FLFCISSIFLLMI 354 + + + + + + I V WG + + K + IP + + F ++ L Sbjct: 289 PSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFLFLALSLWYF 348 Query: 355 KKKYTKI 361 KK ++ Sbjct: 349 KKLNKRL 355 >gi|153877760|ref|ZP_02004356.1| conserved hypothetical protein, membrane [Beggiatoa sp. PS] gi|152065776|gb|EDN65644.1| conserved hypothetical protein, membrane [Beggiatoa sp. PS] Length = 215 Score = 53.9 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 27/206 (13%), Positives = 60/206 (29%), Gaps = 3/206 (1%) Query: 148 NLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGE 207 F+ D +I + P+ I + + D Q + + + +L E Sbjct: 7 YGFWARDGHDFINVRTIFPDGGFGTISLYEFDDEQRLQALTYARTAYYQEG-KWLLKGVE 65 Query: 208 VHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLET 267 + S ++ ++ + +V+ + L N + Sbjct: 66 KNILSANQVTRQFLENVTWDAILKPELIKMVVISPYKLSSLGLYN-YIEYRQQNGQRTAQ 124 Query: 268 YRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISF-GVFWGFSYII 326 Y RL+ L V L++I + + L + F + S + Sbjct: 125 YELALWTRLSYPLVGVTMILLAIPFVFGSLRTVSIGQRILVGALLGVGFHMLNQAVSNMG 184 Query: 327 HKIEQNPYYIPILYLFLFCISSIFLL 352 +P L F + +I ++ Sbjct: 185 LVYGLHPAISAFLPPLAFLMLAIVMM 210 >gi|317010128|gb|ADU80708.1| hypothetical protein HPIN_07620 [Helicobacter pylori India7] Length = 355 Score = 53.9 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 42/367 (11%), Positives = 105/367 (28%), Gaps = 21/367 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ + FL+ L + I L+ + + S N+++ Y I L Sbjct: 2 RLFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPD---SANMIILFFTYDILFALN 58 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + + ++ + + + G S+ ++ P+ +++ + Sbjct: 59 YTLPISLLLAMVLFYIAFIKSNQYTALLSIGFSKCQILSPIFLISLFFTAVYVGLNATPF 118 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + L K +L + I R Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYF------DKINPLLQKAQNIKVFRLKD 172 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVH------RKSPISKDISIMKFKSYTLQTESANSS 236 YA++ + + IL+D ++ + + +K Sbjct: 173 KTLESYAEAKEAFFEDKYWILHDTTIYEMPLSFELGANALSTTRLKTFKTLKNFRPKVLD 232 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 TI +++ L + + + P +S++ A Sbjct: 233 TIYQNKPAVSITDALLSLHALVRQNADTKKVRSF----LYVFAILPFFVPFLSVLIAYFS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL--FLFCISSIFLLMI 354 + + + + + + I V WG + + K + IP + + F ++ L Sbjct: 289 PSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFVFLALSLWYF 348 Query: 355 KKKYTKI 361 KK ++ Sbjct: 349 KKLNKRL 355 >gi|317011633|gb|ADU85380.1| putative permease; putative membrane protein [Helicobacter pylori SouthAfrica7] Length = 355 Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 42/367 (11%), Positives = 106/367 (28%), Gaps = 21/367 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ + FL+ L + I L+ + + S N+++ Y I L Sbjct: 2 RLFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPD---SANMIILFFTYDILFALN 58 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + + ++ + + + G S+ ++ P+ F+++ + Sbjct: 59 YTLPISLLLAMVLFYIAFIKSNQYTALLSIGFSKRQILNPIFFISLFFTAVYVGLNATPF 118 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + L K +L + I R Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYF------DKINPLLQKAQNIKVFRLKD 172 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK------DISIMKFKSYTLQTESANSS 236 YA++ + + IL+D ++ + + ++ Sbjct: 173 KTLESYAEAKEAFFEDKYWILHDTTIYEMPLSFELGANALNTMRLETFKTLKNFRPKVLD 232 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 TI +++ L + + + P +S++ A Sbjct: 233 TIYQNKPAVSITDALFSLHALMRQNADTKKVRSF----LYVFAILPFFVPFLSVLIAYFS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL--FLFCISSIFLLMI 354 + + + + + + I V WG + + K + IP + + F ++ L Sbjct: 289 PSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFLFLALSLWYF 348 Query: 355 KKKYTKI 361 KK ++ Sbjct: 349 KKLNKRL 355 >gi|291277020|ref|YP_003516792.1| inner membrane protein OxaA [Helicobacter mustelae 12198] gi|290964214|emb|CBG40063.1| putative integral membrane protein [Helicobacter mustelae 12198] Length = 354 Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 46/353 (13%), Positives = 98/353 (27%), Gaps = 9/353 (2%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y+ R R L+ + I L+ ++ S S N+++ Y L P Sbjct: 4 YLGRQFFRFILIVFSALEIFFISIDSLKYLDQFPS---SANLIVLFFAYDFLYALNYTLP 60 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + T ++ ++ + G +R ++ PV F+++ + + Sbjct: 61 ISILLATIIFYLNLVKSNQYTAFLALGYTRKQILAPVFFISLTFTFLYVGLNATPFVYAQ 120 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 + + ++ L + N R + Sbjct: 121 ERAEAIMSQENFTNITEDLLVKYENNYVYFQKLYPLIKRAENIKVFELDKQGRLQSFAQA 180 Query: 187 YYAQS-GSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQ 245 A + + A I E ++S + TI Sbjct: 181 KDAIFLHNYWVLSHASISKVPEETTLGKAGLEVSEVDKLKILKGFRPKILDTIYQNKPSV 240 Query: 246 NLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKI 305 ++ + + E R+ + L P L SI+ + + + Sbjct: 241 SIIDAIQSLI-ILQNQDSNSEKIRAILY---AFILIPFFVPLTSIIIGFYAPTLSRYSNL 296 Query: 306 HPIFISLSISFGVFWGFSYIIHKIEQNPYYIP-ILYLFLFCISSIFLLMIKKK 357 + + V WG + K+ + P I+ L F + + L KK Sbjct: 297 ALLGFMFIVLALVIWGLFFAFGKLSISGLLPPEIMMLIPFGLLCVLSLFYFKK 349 >gi|210135665|ref|YP_002302104.1| hypothetical protein HPP12_1476 [Helicobacter pylori P12] gi|210133633|gb|ACJ08624.1| hypothetical protein HPP12_1476 [Helicobacter pylori P12] Length = 355 Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 39/364 (10%), Positives = 107/364 (29%), Gaps = 15/364 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ + FL+ L + I L+ + + S N+++ Y I L Sbjct: 2 RLFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPD---SANMIILFFTYDILFALN 58 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + + ++ + + + G S+ ++ P+ +++ + Sbjct: 59 YTLPISLLLAMVLFYITFIKSNQYTALLSIGFSKCQILSPIFLISLFFTAVYVGLNATPF 118 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + L K +L + I R Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYF------DKINPLLQKAQNIKVFRLKD 172 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRK---SPISKDISIMKFKSYTLQTESANSSTIV 239 YA++ + + IL+D ++ + + ++ + Sbjct: 173 KTLESYAEAKEAFFEDKYWILHDTTIYEMPLSFELGANALSTTRLKTFKTLKNFRPKVLD 232 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 ++ + + + + +T + + P +S++ A + Sbjct: 233 TIYQNKPAVSITDALLSLHALVRQNADTKKVRSF-LYVFAILPFFVPFLSVLIAYFSPSL 291 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL--FLFCISSIFLLMIKKK 357 + + + + + I V WG + + K + IP + + F ++ L KK Sbjct: 292 ARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFIFLALSLWYFKKL 351 Query: 358 YTKI 361 ++ Sbjct: 352 NKRL 355 >gi|163788154|ref|ZP_02182600.1| hypothetical protein FBALC1_07233 [Flavobacteriales bacterium ALC-1] gi|159876474|gb|EDP70532.1| hypothetical protein FBALC1_07233 [Flavobacteriales bacterium ALC-1] Length = 637 Score = 53.5 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 34/253 (13%), Positives = 80/253 (31%), Gaps = 7/253 (2%) Query: 24 VFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRN 83 +FI + + I ++ + + K Y +P ++P+V P + + V + N Sbjct: 1 MFIFVLQGVWLYIAELAGKDLDVAVTAKFIMYYMPKLIPLVVPLTVLLSSIMVFGNFAEN 60 Query: 84 TELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFS 143 E + +TG S ++ + + L I F N + P L Sbjct: 61 YEFAAMKSTGISLQRAMRSLSVFIVALGIGCFFFANNVIPWGEYNFYNLRRNIAKKKPAL 120 Query: 144 YLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT---QTHKIYYAQSGSIDLDRQA 200 + E F + + K N I+ + + + +++G + + Sbjct: 121 AIAEGQFNEIGNINIKVEEKSGDNGQFLKNVIIHEKSKTRGGNYTVIASKNGELKSSPDS 180 Query: 201 IILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNY 260 IL + ++ I+ + +S + +L L + + N+ Sbjct: 181 NILQL----ELTNGNRYQEIINKNRSKNKNLPHTNSYFDKYIINVDLEILNTGDLDEKNH 236 Query: 261 RPELLETYRSEFH 273 + + Sbjct: 237 TDRYSMLDVEQLN 249 Score = 51.5 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 14/104 (13%), Positives = 35/104 (33%), Gaps = 4/104 (3%) Query: 246 NLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKI 305 + +L+ N + +L + H + +I + +R+ Sbjct: 318 STRQILDSNKKTFEKKSIILNKHIIVLHDKFVLAFACIILFFVGAPLGAL---IRKGGLG 374 Query: 306 HPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 P+ I++ + F ++ F + + PIL +L + Sbjct: 375 LPMVIAIVL-FLTYYFFGIFAKNSAEKGSFSPILGSWLSTAIML 417 >gi|320088911|emb|CBY98669.1| Lipopolysaccharide export system permease protein lptG [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 158 Score = 53.5 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 20/145 (13%), Positives = 56/145 (38%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ + ++ + +P + + Sbjct: 7 LDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGNYDALGAGMYTLLSVPKDIQI 66 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + L + + +EL+++ +G +R+ + V+ AI L + + P Sbjct: 67 FFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAP 126 Query: 124 KCRSTIKQLSAKAQLALTFSYLEEN 148 + + A+A ++ Sbjct: 127 QGEQMARNYRAQAMYGGFAAFHPAR 151 >gi|145637644|ref|ZP_01793299.1| predicted permease [Haemophilus influenzae PittHH] gi|145269167|gb|EDK09115.1| predicted permease [Haemophilus influenzae PittHH] Length = 161 Score = 53.5 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 54/126 (42%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + + YI + I + + + +V ++ +I+ +++ V T + + +G IP + Sbjct: 3 NTLDRYIGKSILGTIFATLMTLVGLSAIIKFVEQFRSVGKGTYDIWQAVIFTGLTIPKDI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + L ++ +EL+I+ + G SR + V+ A+ L +F I Sbjct: 63 ETFFPMAALLGALIALGNLASRSELVIMQSAGFSRFKIGIAVMKTALPLVVFTVIIGEWG 122 Query: 122 EPKCRS 127 P+ Sbjct: 123 IPQTEQ 128 >gi|315585885|gb|ADU40266.1| conserved hypothetical protein [Helicobacter pylori 35A] Length = 355 Score = 53.5 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 44/367 (11%), Positives = 111/367 (30%), Gaps = 21/367 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ + FL+ L + I L+ + + S N+++ Y I L Sbjct: 2 RLFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPD---SANMIILFFTYDILFALN 58 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + + ++ + + + G S+ ++ P+ +++ ++ Sbjct: 59 YTLPISLLLAMVLFYIAFIKSNQYTALLSIGFSKCQILSPIFLISLFFTVVYVGLNATPF 118 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + L K +L + I R Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYF------DKINPLLQKAQNIKVFRLKD 172 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVH------RKSPISKDISIMKFKSYTLQTESANSS 236 YA++ + + IL+D ++ + + + +K Sbjct: 173 KTLESYAEAKEAFFEDKYWILHDTIIYEMPLSFELGNNALNATHLKTFKTLKNFRPKVLD 232 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 TI +++ L + + + + RS + P +S++ A Sbjct: 233 TIYQNKPAVSITDAL-LSLHALMRQNADTKKVRS---FLYVFAILPFFVPFLSVLIAYFS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL--FLFCISSIFLLMI 354 + + + + + + I V WG + + K + IP + + F ++ L Sbjct: 289 PSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFLFLALSLWYF 348 Query: 355 KKKYTKI 361 KK ++ Sbjct: 349 KKLNKRL 355 >gi|217033870|ref|ZP_03439294.1| hypothetical protein HP9810_870g2 [Helicobacter pylori 98-10] gi|216943633|gb|EEC23078.1| hypothetical protein HP9810_870g2 [Helicobacter pylori 98-10] Length = 355 Score = 53.5 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 44/367 (11%), Positives = 111/367 (30%), Gaps = 21/367 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ + FL+ L + I L+ + + S N+++ Y I L Sbjct: 2 RLFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPD---SANMIILFFTYDILFALN 58 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + + ++ + + + G S+ ++ P+ +++ + Sbjct: 59 YTLPISLLLAMVLFYIAFIKSNQYTALLSIGFSKCQILSPIFLISLFFTAVYVGLNATPF 118 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + L K +L + I R Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYF------DKINPLLQKAQNIKVFRLKD 172 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVH------RKSPISKDISIMKFKSYTLQTESANSS 236 YA++ + + IL+D ++ + + + +K Sbjct: 173 KTLESYAEAKEAFFEDKYWILHDTIIYEMPLSFELGNNALNATHLKTFKTLKNFRPKVLD 232 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 TI +++ L + + ++ + RS + P +S++ A Sbjct: 233 TIYQNKPAVSITDAL-LSLHALMHQNADTKKVRS---FLYVFAILPFFVPFLSVLIAYFS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL--FLFCISSIFLLMI 354 + + + + + + I V WG + + K + IP + + F ++ L Sbjct: 289 PSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFLFLALSLWYF 348 Query: 355 KKKYTKI 361 KK ++ Sbjct: 349 KKLNKRL 355 >gi|261838772|gb|ACX98538.1| hypothetical protein KHP_1349 [Helicobacter pylori 51] Length = 355 Score = 53.5 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 42/367 (11%), Positives = 106/367 (28%), Gaps = 21/367 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ + FL+ L + I L+ + + S N+++ Y I L Sbjct: 2 RLFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPD---SANMIILFFTYDILFALN 58 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + + ++ + + + G S+ ++ P+ +++ + Sbjct: 59 YTLPISLLLAMVLFYIAFIKSNQYTALLSIGFSKCQILSPIFLISLFFTAVYVGLNATPF 118 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + L K +L + I R Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYF------DKINPLLQKAQNIKVFRLKD 172 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK------DISIMKFKSYTLQTESANSS 236 YA++ + + IL+D ++ + + + +K Sbjct: 173 KTLESYAEAKEAFFEDKYWILHDTIIYEMPLSFELGANALNTTHLKTFKTLKNFRPKVLD 232 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 TI +++ L + + + P +S++ A Sbjct: 233 TIYQNKPAVSITDALLSLHALVRQNADTKKVRSF----LYVFAILPFFVPFLSVLIAYFS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL--FLFCISSIFLLMI 354 + + + + + + I V WG + + K + IP + + F ++ L Sbjct: 289 PSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFLFLALSLWYF 348 Query: 355 KKKYTKI 361 KK ++ Sbjct: 349 KKLNKRL 355 >gi|82523966|emb|CAI78777.1| predicted permease YjgP/YjgQ family [uncultured epsilon proteobacterium] Length = 356 Score = 53.5 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 42/360 (11%), Positives = 113/360 (31%), Gaps = 12/360 (3%) Query: 5 ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 YI + FL+ + ++ ++ +SS S N++L Y + M+ Sbjct: 4 FKYISFHYIKYFLIILIALMLFLVGFDYMENAGDLSS---SANLVLIYLVYKAFFAIDML 60 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P + + R+ L+ + G SR+ +++P + ++ + + Sbjct: 61 LPLSLVFAMVSTKIFLIRSNALVSFYSLGYSRVDVLRPFVVVSTSIIVIFISL---HALP 117 Query: 125 CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTH 184 S + S + + +LFF D +GI + + Sbjct: 118 SFSRADEYSNNIRKNAEYLSPTRDLFFTYKDQYVYFSKMLPLQERAEGIRVFSVINNSLQ 177 Query: 185 KIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAND 244 ++ A+S D I D + I ++ I+ + + Sbjct: 178 EVLVAKSAVYRDDYWHIKQADIIRKPIDLSFESSGIRVTSVEDMKILEGFRPKILDQVYE 237 Query: 245 QNLSFLLNPNPNN---PNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 ++F + + + + T + +K F +I + + Sbjct: 238 GKVNFTITDAIDAIFLLKNQNISVSTIKGALYKIFVYPFFVPCLVIIIFFFVP---ISPR 294 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTKI 361 + ++ + WG +++ ++ N + + + + M + ++ ++ Sbjct: 295 FLNVSLFSFGAILATLLVWGILFMLIELSNNKTIPSEIGVVAPIVILFLISMRQYRHYRL 354 >gi|313144652|ref|ZP_07806845.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] gi|313129683|gb|EFR47300.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] Length = 341 Score = 53.5 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 58/358 (16%), Positives = 126/358 (35%), Gaps = 17/358 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+ + F L + FIA V+ ++ S L + YLIP+ Sbjct: 1 MAMLKKYLFSSFAQIFFPFFLVLFFIASVVLLIDIAGRTYVVKMSFLDLGTLFMYLIPSS 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + P F ++ + + EL++ + G+ + +++ L + +L ++ LF+ I Sbjct: 61 LFFIIPITFFAALVLGISRLAYDYELMVCFSLGSKPLDMVRFFLPITLLATLVLFVFSFI 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P S K A+ + + + +L D L N Q + + Sbjct: 121 LLPLTTSASKNFVAQKKADIDVNIKPGEFGQKLGDWLVYV--DSVDNRKYQNLVLFSENG 178 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + AQSG + ++ LN ++I + + + +++ + Sbjct: 179 FEGDTFIVAQSGQTNNNQGLFELNLTSGKAYFAAPEEIKRVDYNTMSVRQNVSEPQ---- 234 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + L+ + ++L Q + +F L+SI + Sbjct: 235 ----LSGYDLIAYWKEAFSLESRQK-------LRKLAQAVMVSLFPLVSIFLIPLFGIAN 283 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 R + + + + S +++ YI I I L+ F ++ I + Y Sbjct: 284 PRFRSNMSYFYVIGSVALYFVLMYIASDNFALVGMISIPILWFFGGFFLYKKFIARFY 341 >gi|317179675|dbj|BAJ57463.1| hypothetical protein HPF30_1366 [Helicobacter pylori F30] Length = 355 Score = 53.1 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 42/367 (11%), Positives = 106/367 (28%), Gaps = 21/367 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ + FL+ L + I L+ + + S N+++ Y I L Sbjct: 2 RLFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPD---SANMIILFFTYDILFALN 58 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + + ++ + + + G S+ ++ P+ +++ + Sbjct: 59 YTLPISLLLAMVLFYIAFIKSNQYTALLSIGFSKCQILSPIFLISLFFTAVYVGLNATPF 118 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + L K +L + I R Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYF------DKINPLLQKAQNIKVFRLKD 172 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK------DISIMKFKSYTLQTESANSS 236 YA++ + + IL+D ++ + + + +K Sbjct: 173 KTLESYAEAKEAFFEDKYWILHDTIIYEMPLSFELGANALNATHLKTFKTLKNFRPKVLD 232 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 TI +++ L + + + P +S++ A Sbjct: 233 TIYQNKPAVSITDALLSLHALVRQNADTKKVRSF----LYVFAILPFFVPFLSVLIAYFS 288 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL--FLFCISSIFLLMI 354 + + + + + + I V WG + + K + IP + + F ++ L Sbjct: 289 PSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFLFLALSLWYF 348 Query: 355 KKKYTKI 361 KK ++ Sbjct: 349 KKLNKRL 355 >gi|255321867|ref|ZP_05363017.1| tRNA-I [Campylobacter showae RM3277] gi|255300971|gb|EET80238.1| tRNA-I [Campylobacter showae RM3277] Length = 353 Score = 53.1 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 50/361 (13%), Positives = 110/361 (30%), Gaps = 13/361 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+ + F++ + + I IL + + S N+ L G T Sbjct: 1 MNLYARYVGWLYFKYFVILFIALTLFYVGIDILTNLKDM---PASANLKLLYFGLTSLTA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P SM R+ EL+ G + LIKP ++A+ +++ Sbjct: 58 VNYVLPLALIFALITSKFSMIRSNELVSFYALGIDKNRLIKPPFYIALAITLIYVGLNFT 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + + L+ T ++F + + S + + + I D Sbjct: 118 PFAYAYEYGRNIVKLSNLSRTS----SDIFLKFEGKFVYMDSLNPISGEAKDVRIFDIDS 173 Query: 181 TQTHKIYYAQSGSIDLD----RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + +SG D ++A I+N + + DI + Sbjct: 174 SNLRSATFGESGKFIDDAWLLKEAKIVNLPQNIKLGEKGLDIKTPSGLKTLEGFKPKTIE 233 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD-K 295 + + + +S ++ + L + ++ + F LI Sbjct: 234 SASAENSAITISDAVDYILAFKDE-GIGLNSTKTTLYNLAFAPFFAPFMVLIIYYFLPVT 292 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 K I+ +G + +P +L + L + +L Sbjct: 293 GRFFNLALKSFIFTIASLCVWGALFVMMRFARNGVVSPEIGVLLPIILLGAYAFYLHFKS 352 Query: 356 K 356 + Sbjct: 353 R 353 >gi|126663512|ref|ZP_01734509.1| hypothetical protein FBBAL38_09189 [Flavobacteria bacterium BAL38] gi|126624460|gb|EAZ95151.1| hypothetical protein FBBAL38_09189 [Flavobacteria bacterium BAL38] Length = 156 Score = 53.1 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 57/135 (42%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YIL+ +F + + + I I + +++N + L +L G Sbjct: 1 MKIIDKYILKRYLVTFSVMLIMFIPIGITIDVSEKVNKMIEKKIPLTDILVYYGDFTVYF 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++ P + + + NTE++ I ++G S ++P ++ A+++SIF + Sbjct: 61 ANLLFPIFLFLSIIWFTSKLANNTEIIAILSSGISFARFLRPFIYGAVIVSIFALLMGFF 120 Query: 121 IEPKCRSTIKQLSAK 135 + P+ + Sbjct: 121 LIPQASKGFNDFRYQ 135 >gi|15646107|ref|NP_208289.1| hypothetical protein HP1498 [Helicobacter pylori 26695] gi|2314682|gb|AAD08544.1| predicted coding region HP1498 [Helicobacter pylori 26695] Length = 355 Score = 53.1 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 39/364 (10%), Positives = 107/364 (29%), Gaps = 15/364 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ + FL+ L + I L+ + + S N+++ Y I L Sbjct: 2 RLFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPD---SANMIILFFTYDILFALN 58 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + + ++ + + + G S+ ++ P+ +++ + Sbjct: 59 YTLPISLLLAMVLFYIAFIKSNQYTALLSIGFSKCQILSPIFLISLFFTAIYVGLNATPF 118 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + L K +L + I R Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYF------DKINPLLQKAQNIKVFRLKD 172 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRK---SPISKDISIMKFKSYTLQTESANSSTIV 239 YA++ + + IL+D ++ + + ++ + Sbjct: 173 KTLESYAEAKEAFFEDKYWILHDTTIYEMPLSFELGANALSTTRLKTFKTLKNFRPKVLD 232 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 ++ + + + + +T + + P +S++ A + Sbjct: 233 TIYQNKPAVSITDALLSLHALVRQNADTKKVRSF-LYVFAILPFFVPFLSVLIAYFSPSL 291 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL--FLFCISSIFLLMIKKK 357 + + + + + I V WG + + K + IP + + F ++ L KK Sbjct: 292 ARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFIFLALSLWYFKKL 351 Query: 358 YTKI 361 ++ Sbjct: 352 NKRL 355 >gi|261840174|gb|ACX99939.1| hypothetical protein HPKB_1402 [Helicobacter pylori 52] Length = 355 Score = 53.1 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 44/368 (11%), Positives = 104/368 (28%), Gaps = 23/368 (6%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ + FL+ L + I L+ + + S N+++ Y I L Sbjct: 2 RLFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPD---SANMIILFFTYDILFALN 58 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + + ++ + + + G S+ ++ P+ +++ + Sbjct: 59 YTLPISLLLAMVLFYIAFIKSNQYTALLSIGFSKCQILSPIFLISLFFTAIYVGLNATPF 118 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + L K +L + I R Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYF------DKINPLLQKAQNIKVFRLKG 172 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHR-------KSPISKDISIMKFKSYTLQTESANS 235 YA++ + + IL+D ++ + + FK+ Sbjct: 173 KTLESYAEAKEAFFEDKYWILHDTIIYEMPLSFELGNNALNTTRLKTFKTLKNFRPKVLD 232 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + K LL+ + + P +S++ A Sbjct: 233 TIYQNKPAVSITDALLSLHALVRQNADTKKVRSFL-----YVFAILPFFVPFLSVLIAYF 287 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL--FLFCISSIFLLM 353 + + + + + + I V WG + + K + IP + + F S+ L Sbjct: 288 SPSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFVFLSLSLWY 347 Query: 354 IKKKYTKI 361 KK ++ Sbjct: 348 FKKLNKRL 355 >gi|91204094|emb|CAJ71747.1| hypothetical protein kustc1002 [Candidatus Kuenenia stuttgartiensis] Length = 578 Score = 53.1 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 51/287 (17%), Positives = 93/287 (32%), Gaps = 16/287 (5%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + Y++R ++F S L + ++ ++Q + + L + ++ V Sbjct: 52 NILQRYVIREWFQTFWPSFLCFEILMFLGFVIQIL----HKGLDIIALKALIPHMFIQVA 107 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P P TT ++ + E++ I +G +I PVL + I+ S F + I Sbjct: 108 PYSIPSALLTATTLTYGRLSADREIIAIQASGIHLRKIITPVLVIGIIFSFFTLVLSAEI 167 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ IK L +A + L L + I I N I + D Sbjct: 168 LPRSLYQIKLLQERAINNILAGRLATFQKKVLMEPYQIYIGNVVDNINKDVTVIQYADDY 227 Query: 182 QTHKIYYAQSGSIDLDRQAII---LNDGEVHRKSPISKD--ISIMKFKSYTLQTESANSS 236 T I + + + I L GE + + + + F T + Sbjct: 228 VTDIIIAEEGSIEVNNEKNTIFLTLRKGEFIKPNYKKAEEVPRLGVFTETTFEIPMGKDK 287 Query: 237 TIVLKANDQNLSFLLNPNPN------NPNYRPELLETYRSEFHKRLT 277 + L N N P+ E R E ++L Sbjct: 288 -ADFSTKHMTIFQLFKYNNEIDRELANSKEIPDNFEEARVEASRKLA 333 Score = 49.2 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 40/118 (33%), Gaps = 12/118 (10%) Query: 244 DQNLSFLLNPNPN-----NPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 ++N+S LL + + +L HKR++Q L + F +I I K Sbjct: 455 EKNISVLLRKITSFESDLTLASKKKLRRKNDISIHKRISQALSCLSFIVIGIPLGIKLRS 514 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF----LFCISSIFLL 352 I +S I +++ + + + L+ + I I + Sbjct: 515 SH---LIIGFGVSFMIILFIYYPLMVTGSVLADDTLLPVVPVLWGANGILLIVGICIY 569 >gi|320101900|ref|YP_004177491.1| permease YjgP/YjgQ family protein [Isosphaera pallida ATCC 43644] gi|319749182|gb|ADV60942.1| permease YjgP/YjgQ family protein [Isosphaera pallida ATCC 43644] Length = 392 Score = 53.1 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 42/391 (10%), Positives = 113/391 (28%), Gaps = 37/391 (9%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLK----ISGYLI 57 + + +++++ +V + VI ++ + L +++ I Sbjct: 6 RILDRQRYWSFVKAYVICFSSLVGLYIVIHAFANVDEFGKAAPGLMGVVRAMGFYYLIRI 65 Query: 58 PTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFIS 117 + M +T M ++ +L+ + G S I+PVL ++L+S+ I+ Sbjct: 66 SQYYDQLCGVIAMMAAIFTVTFMQKDNQLVAMLAAGISTHRAIRPVLVCSVLVSLLAVIN 125 Query: 118 ENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD 177 + +I P+ ++ + +L ++ + Sbjct: 126 QELILPRFQTELSLKPDDDGKRPLPVSNLYDLNEIPIHGRKADRARRAMILNATLPIGLT 185 Query: 178 SRDTQTHKIYYAQSGSIDLD---RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 + + +L + + + K + L + Sbjct: 186 GTLRELEARDALHIPHDHPTAPLKGGWLLRGATISPPLEEDEVGPLKKLSRHELNGFPPS 245 Query: 235 SSTIVL--KANDQNLSFLLNPNPNNPNYRPELLETYR----------------------S 270 + + +++Q+ F N P+ Y Sbjct: 246 TLSQAELGGSDEQSYFFFTNITFEMLTRDPKEWMQYASSGQLIAALGDPSNAADHLAISI 305 Query: 271 EFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIE 330 + H+RL + + R + +L + +F+G ++ + Sbjct: 306 QLHQRLLRPFLSLALL---CAVLPSVLGGPNRNMFISLGYALGTT-ALFYGGLFLFQYLA 361 Query: 331 QNPYYIPILYLFLFCISSIFLLMIKKKYTKI 361 PI F ++F L+ +++ I Sbjct: 362 TRGAISPIDAA--FAPLAVFSLLAAMRWSAI 390 >gi|315122194|ref|YP_004062683.1| putative permease protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495596|gb|ADR52195.1| putative permease protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 321 Score = 53.1 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 34/318 (10%), Positives = 89/318 (27%), Gaps = 8/318 (2%) Query: 43 TESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKP 102 S + +S +P ++ PF + + V ++NR EL+I G S L+ P Sbjct: 6 GYSTSRGAMLSVTRLPLIIQQTIPFISLIVSMIVFFNLNRTNELVITRAVGVSIWQLLSP 65 Query: 103 VLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS 162 + LL +F + N + + + + + I Sbjct: 66 FTTGSFLLGMFTILVINPMAVSGEKMGISMVNNWRTHDQKTLEIIPWIHIENKKEDFFIG 125 Query: 163 KYNPNNTLQ--GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISI 220 F + + + I+ + + + I L + ++ Sbjct: 126 AKKILPEKNILEDFTFITVNKENDTIFRQDAHFAIVQKNNIYLKEVVEYKY---GALPVF 182 Query: 221 MKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWL 280 + + + + ++ + ++F+ ++ Sbjct: 183 KNSTILNIAIKMNYFQKFTEQFTSHSFYEIIKKVIFSHQSSVFRNYFSETQFYFMISIPF 242 Query: 281 FPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY 340 V LI+ + R + + + F ++ + + + Sbjct: 243 MLVAMTLIAAAVSL--EFNRSNQPRIIVTYGVCAGFMLYTIITLMKSFGKSGILLPFAAA 300 Query: 341 LFLFC-ISSIFLLMIKKK 357 L I + + ++ KK Sbjct: 301 LIPIISIICLSIFILLKK 318 >gi|307721571|ref|YP_003892711.1| permease YjgP/YjgQ family protein [Sulfurimonas autotrophica DSM 16294] gi|306979664|gb|ADN09699.1| permease YjgP/YjgQ family protein [Sulfurimonas autotrophica DSM 16294] Length = 358 Score = 52.7 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 44/356 (12%), Positives = 109/356 (30%), Gaps = 10/356 (2%) Query: 5 ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 YI + FL+ +V + +S S S N++L Y + + ++ Sbjct: 4 FKYISLHYIKYFLIILTALVLFVVGFDYMGSAEELSKS--SANLILIYLVYKSFSAIDIL 61 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P + + R+ L+ + G SR+ +++P +F++ + I Sbjct: 62 LPVALVFAMISTKIYLIRSNALVSFFSLGYSRVDVLRPFVFVSTAVIILFIALHAWS--- 118 Query: 125 CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTH 184 + ++ S + + +LFF + + I + + Sbjct: 119 NFARSEEFSRNIKKNAQYLSPTRDLFFAYKGKYIYFSKLLPLQESAKNIRVFSVENESLK 178 Query: 185 KIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAND 244 ++ A+S + I D I K+ L+ ++ + + Sbjct: 179 EVVVAKSARYIDNYWFIKRADIITKPDDLSLVSPGITVTKAKDLRILEGFRPKMLDQVYE 238 Query: 245 QNLSFLLN---PNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 ++F + + + + ++ +K F LI I+ VR Sbjct: 239 GKVNFTIKDAVDAIRLLDKQNINTDNIKAALYKIFIYPFFVP--CLIVIIFFFVPMSVRF 296 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 F ++ + + ++I I + I ++ + + Sbjct: 297 LNVSLFTFGAILATLLTWGILFFLIKLANNKVISSEIGIIVPVVILAVLAFLQWHR 352 >gi|222824356|ref|YP_002575930.1| hypothetical protein Cla_1363 [Campylobacter lari RM2100] gi|222539577|gb|ACM64678.1| conserved hypothetical integral membrane protein [Campylobacter lari RM2100] Length = 353 Score = 52.7 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 43/357 (12%), Positives = 98/357 (27%), Gaps = 5/357 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F YI +SF + + F I L N + S N+ L +L + Sbjct: 1 MNVFFRYISSLYLKSFFILFFSLTFFFVAIDFLVNFNKIPK---SANLELLYILFLTCSA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P + +M R+ E + + G S+ +I A+ Sbjct: 58 VSYILPLAIVFALILCVFNMIRSNEFVSLYALGLSKNQVIFYPFLWALFFCFVYIGLNFT 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + ++ + + + + + Sbjct: 118 PFAYANEYKSNIIKTGLVSREGGNVLIKYDNKFVYIEKTSTNSLYNVKIFDVKNLDIKQL 177 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 TQ K + +D + I + D + + + + ++V Sbjct: 178 TQAKKAQFNGQSWELIDVKTIKVPDKLIVSQEGLKIKDFKSIKGLENFSPKILERISLVE 237 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS-IVAADKRALV 299 ++S L + + T R+ + + F L+ Sbjct: 238 SDPSYSISDAL-ESILIFAKQDISTNTLRTSLYSLVFIPFFAPFLMLVIYYYFPITARFF 296 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 FIS+ ++G+ + + + P + +L +F+ + K Sbjct: 297 NLAFLAFVFFISVLSAWGLLFLLTRLSENEILLPEFGIMLPIFILICMGSWFYYKNK 353 >gi|223038562|ref|ZP_03608855.1| methionyl-tRNA formyltransferase [Campylobacter rectus RM3267] gi|222879964|gb|EEF15052.1| methionyl-tRNA formyltransferase [Campylobacter rectus RM3267] Length = 353 Score = 52.7 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 51/361 (14%), Positives = 108/361 (29%), Gaps = 13/361 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+ + F++ + + I IL + + S N+ L G T Sbjct: 1 MNLYARYVGWLYFKYFVILFVALTLFYVGIDILTNLKSM---PASANLKLLYFGLTSLTA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P SM R+ EL+ G + LIKP ++A+ ++ Sbjct: 58 VNYVLPLSLIFALIASEFSMIRSNELVSFYALGIDKNRLIKPPFYIALTITFVYVGLNFT 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + + L+ T ++F + + S + + + I D Sbjct: 118 PFAYAYEYGRNIVKLSNLSRTS----SDIFLKFEGKFVYMDSLNPISGEAKDVRIFDING 173 Query: 181 TQTHKIYYAQSGSIDLD----RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + S D +QA I+N + + DI + + Sbjct: 174 SNLRSATFGLSARFVDDLWLVKQAKIVNLPQNIKLGEKGLDIKRLGELKTLENFKPKTIE 233 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAAD-K 295 +++ +S ++ N L + ++ + F LI Sbjct: 234 NAAAESSAITISDAVDYIQAFKNE-GIGLNSVKTTLYNLAFSPFFAPFMVLIIYYFLPVT 292 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 K I+ +G + +P +L + L + +L Sbjct: 293 GRFFNLALKSFIFTIASLCVWGALFVMMRFARNGVISPEIGVLLPVILLGTYAFYLHFKA 352 Query: 356 K 356 + Sbjct: 353 R 353 >gi|260891452|ref|ZP_05902715.1| permease, YjgP/YjgQ family [Leptotrichia hofstadii F0254] gi|260858835|gb|EEX73335.1| permease, YjgP/YjgQ family [Leptotrichia hofstadii F0254] Length = 153 Score = 52.7 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 23/129 (17%), Positives = 49/129 (37%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + YI + + FI + I++ + + +S ++ Y IP V Sbjct: 1 MKIIDRYIYNSLFLPSIFGISIFTFIMMLNVIMEVMERLFASDLPFISIIDYLFYAIPGV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L P + V ++ E++ ++ +G +I+P I+L++ E Sbjct: 61 LVQTIPMGAFLGVMLVYGGLSETNEIVAMEGSGIGLFRIIRPAFIFGIILTLIGLGLEIY 120 Query: 121 IEPKCRSTI 129 + P+ Sbjct: 121 VNPRALKKY 129 >gi|13236182|gb|AAK16078.1|AF288080_5 YacA [Photorhabdus luminescens] Length = 146 Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 14/133 (10%), Positives = 37/133 (27%), Gaps = 1/133 (0%) Query: 225 SYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVI 284 + + + L + ++S L + Y+ K++ + Sbjct: 15 DWKTRLTPQKLGVVALDPDALSISGLYQ-YIKYLKQTEQESGXYQLNMWKKIFAPFSVAV 73 Query: 285 FGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 L+++ IS F V + + P + L Sbjct: 74 MMLMALSFIFGPLRTVLMGVRIITGISFGFLFYVLNEIFGPLSLVYSMPAVLAALLPSFL 133 Query: 345 CISSIFLLMIKKK 357 ++ L++K++ Sbjct: 134 FLTVSIYLLLKRQ 146 >gi|225848004|ref|YP_002728167.1| permease, YjgP/YjgQ family [Sulfurihydrogenibium azorense Az-Fu1] gi|225644087|gb|ACN99137.1| putative permease, YjgP/YjgQ family [Sulfurihydrogenibium azorense Az-Fu1] Length = 339 Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 55/357 (15%), Positives = 113/357 (31%), Gaps = 20/357 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YIL+ + F++ + Q+L N + +L L++ + + Sbjct: 1 MKILHRYILKNFFKKFIILIGLFSIVITSSQLLHLPNFA--YSMNLIDFLQLLVMIDISF 58 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L F F + V S+ N E+ + + G S+ L+KPV L + I Sbjct: 59 LKYQILFGFFIAWLLVGVSIRENNEIYAVYSLGVSQKELLKPVFITTTLFTALALIVSIT 118 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + ++ F ++++++ + + + Sbjct: 119 LIPYANQERSKFLTLKVKNYILESIQPKNFSKINENISVYTESK------ENSTLHKIII 172 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 Y + + ++L DG +H S S + + S++L T + Sbjct: 173 YNKSNKYLITAKEGIFFQDKVVLKDGYIHIPSEKSFSVIKYEKYSFSLDTSYVKEIPLED 232 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 Q ++ + + L++ L Sbjct: 233 YKTSQLINVFFSKEKDYQKAYSVLIDRIFFPIPFIFIG------------FIGFLLGLNF 280 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + K + + +SIS I IE+N + + L L + S L + KK Sbjct: 281 SKSKETLLSLVISISILYMVINYLFIRVIEKNTFISFVYLLVLILLFSGILRFVWKK 337 >gi|15807417|ref|NP_296150.1| hypothetical protein DR_2430 [Deinococcus radiodurans R1] gi|6460254|gb|AAF11980.1|AE002073_10 hypothetical protein DR_2430 [Deinococcus radiodurans R1] Length = 350 Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 44/357 (12%), Positives = 103/357 (28%), Gaps = 11/357 (3%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 ILR + + + ++ + + + + + + + ++PT+ Sbjct: 4 SILPRSILREVLKMYGAGLALLLALQFADTLSSTLGKAIAYRATASESATAFLAILPTIF 63 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 L+ + R++EL G ++L+ P+L L+ F + + Sbjct: 64 NRALVLSVPFAILLGLSRLQRDSELKAAFAAGIRPLSLVWPLLLPFTLVGALAFWNAGTV 123 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + +N + LY + Q + Sbjct: 124 VPAGLDRWDKTWYSIFNVPEKIPTRDNYTYAPPGALYY-AGRVTQAPQGQPAPLAGVMVQ 182 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + +Y A SGS + Q+ L+ V + + ++ + ++ Sbjct: 183 RGGVVYTANSGSWNTAAQSWTLDAPWV------TAPGERPRQQAGPVTLPQGDTLRPPPA 236 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 + + L + + Y + R P+ F + AA L+R Sbjct: 237 EAKKVSNAALRTALAGESLTEQERREYTYQLASRYADPFTPIAFA---LAAAVLGLLIRN 293 Query: 302 RKKIHPIFISLSISFGVFWGFS-YIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + I F V W + +P + +F + + L + Sbjct: 294 QAAALAAVIVFIAGFYVLWITMPQLARAGAVDPTLAAWVPSLIFLLLGLGLAWRVNR 350 >gi|217031844|ref|ZP_03437347.1| hypothetical protein HPB128_199g52 [Helicobacter pylori B128] gi|298735532|ref|YP_003728053.1| hypothetical protein HPB8_32 [Helicobacter pylori B8] gi|216946496|gb|EEC25098.1| hypothetical protein HPB128_199g52 [Helicobacter pylori B128] gi|298354717|emb|CBI65589.1| conserved hypothetical protein [Helicobacter pylori B8] Length = 355 Score = 51.9 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 41/364 (11%), Positives = 107/364 (29%), Gaps = 15/364 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ + FL+ L + I L+ + + S N+++ Y I L Sbjct: 2 RLFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPD---SANMIILFFTYDILFALN 58 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + S ++ + + + G S+ ++ P+ +++ + Sbjct: 59 YTLPISLLLAMVLFYISFIKSNQYTALLSIGFSKCQILSPIFLISLFFTAVYVGLNATPF 118 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + L K +L + I R Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYF------DEINPLLQKAQNIKVFRLKD 172 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRK---SPISKDISIMKFKSYTLQTESANSSTIV 239 YA++ + + IL+D ++ + + ++ + Sbjct: 173 KTLESYAEAKEAFFEDKYWILHDTTIYEMPLSFELGANALSTTRLKTFKTLKNFRPKVLD 232 Query: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 ++ + + + + +T + + P +S++ A + Sbjct: 233 TIYQNKPAVSITDALLSLHALVRQNADTKKVRSF-LYVFAILPFFVPFLSVLIAYFSPSL 291 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL--FLFCISSIFLLMIKKK 357 + + + + + I V WG + + K + IP + + F S+ L KK Sbjct: 292 ARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFLFLSLSLWYFKKL 351 Query: 358 YTKI 361 ++ Sbjct: 352 NKRL 355 >gi|224438206|ref|ZP_03659141.1| hypothetical protein HcinC1_09510 [Helicobacter cinaedi CCUG 18818] Length = 339 Score = 51.9 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 57/355 (16%), Positives = 125/355 (35%), Gaps = 17/355 (4%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + Y+ + F L + FIA V+ ++ S L + YLIP+ L Sbjct: 2 LKKYLFSSFAQIFFPFFLVLFFIASVVLLIDIAGRTYVVKMSFLDLGTLFMYLIPSSLFF 61 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 + P F ++ + + EL++ + G+ + +++ L + +L ++ LF+ I+ P Sbjct: 62 IIPITFFAALVLGISRLAYDYELMVCFSLGSKPLDMVRFFLPITLLATLVLFVFSFILLP 121 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 S K A+ + + + +L D L N Q + + + Sbjct: 122 LTTSASKNFVAQKKADIDVNIKPGEFGQKLGDWLVYV--DSVDNRKYQNLVLFSENGFEG 179 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 AQSG + ++ LN ++I + + + +++ + Sbjct: 180 DTFIVAQSGQTNNNQGLFELNLTSGKAYFAAPEEIKRVDYNTMSVRQNVSEPQ------- 232 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 + L+ + ++L Q + +F L+SI + R Sbjct: 233 -LSGYDLIAYWKEAFSLESRQK-------LRKLAQAVMVSLFPLVSIFLIPLFGIANPRF 284 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + + + + S +++ YI I I L+ F ++ I + Y Sbjct: 285 RSNMSYFYVIGSVALYFVLMYIASDNFALVGMISIPILWFFGGFFLYKKFIARFY 339 >gi|78776668|ref|YP_392983.1| permease YjgP/YjgQ [Sulfurimonas denitrificans DSM 1251] gi|78497208|gb|ABB43748.1| permease YjgP/YjgQ [Sulfurimonas denitrificans DSM 1251] Length = 359 Score = 51.9 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 48/362 (13%), Positives = 101/362 (27%), Gaps = 9/362 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 YI R F++ L +V + + S N+ L Y + Sbjct: 2 LVFKYITFHYIRYFIIILLALVLFLVGFDYMGNTEKL---DISANLFLIYVVYKTFYAID 58 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 M+ P + + R+ L+ + G SRI ++KP + +A + Sbjct: 59 MLLPLSLIFAMISTKIFLIRSNALVSFYSLGYSRIDILKPFVVVATAMITLFISL---HS 115 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + + + + + +LFF D + + I + D Sbjct: 116 ISNFARADEFAKNIRKNAQYLSPTRDLFFTYKDKFVYFSKLLPLQESAENIRVFSFVDNS 175 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 ++ A+ S D I + D + I + L+ ++ + Sbjct: 176 LKEVLVAKRASYRNDAWLIKMADIITKPDDISFDSLGIKVTQKDNLEILQGFRPKMLDQV 235 Query: 243 NDQNLSFLLNPNPNN---PNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 + ++F + + + +S +K F +I Sbjct: 236 YEGKVNFSIKDAIDAYWLLRDQNINTNIVKSALYKIFVYPFFVPSLVVIIFFFVPVSVRF 295 Query: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYT 359 I S+ F + + P + I+ L IK + + Sbjct: 296 LNVSLFSFAAIISSLMIWAFLFSLVELSNHKTIPSELGIVLPNLLLFLFALRQWIKYRTS 355 Query: 360 KI 361 I Sbjct: 356 PI 357 >gi|254672901|emb|CBA07216.1| predicted permease [Neisseria meningitidis alpha275] Length = 124 Score = 51.9 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 13/120 (10%), Positives = 38/120 (31%), Gaps = 2/120 (1%) Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K + ++ L + + Y + ++L + L++ + Sbjct: 7 KPDQMSVGELT-TYIRHLQNNSQNTRIYAIAWWRKLVYPAAAWVMALVAFAFTPQTTRHG 65 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 I L + F + F ++ P ++ L + + + +I+K+ + Sbjct: 66 NMGLKLFGGICLGLLFHLAGRFFGFTSQLYGIPPFLAG-ALPTIAFALLAVWLIRKQEKR 124 >gi|325954392|ref|YP_004238052.1| permease YjgP/YjgQ family protein [Weeksella virosa DSM 16922] gi|323437010|gb|ADX67474.1| permease YjgP/YjgQ family protein [Weeksella virosa DSM 16922] Length = 500 Score = 51.5 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 41/248 (16%), Positives = 88/248 (35%), Gaps = 1/248 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K + Y+L+ F + FI V Q ++ + ++ Y+ V+ Sbjct: 3 KKLDGYVLKTFIGPFFFIFSILFFIFIVQFAWQEMDKYVGKGLDWLTIGELIFYMGINVI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 +V P + + EL + +G S + ++ V L LLSI L+ + + Sbjct: 63 QLVLPLTILLGSIMTFGGFGERYELAAMKASGLSLVRILSSVFVLVALLSIGLYHFGDKM 122 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV-DSRD 180 P + +Q+ A + E +F +K+++ + +N+ + I + Sbjct: 123 MPYSQRKARQIMFSVIEAKPTLQITEGVFSNNIPGFSMKVNRVDGDNSEKLTDIFIHQQL 182 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ++T +I+ D II G + + + + F + N S Sbjct: 183 SKTVLDENGNDINIEQDPLTIIAEKGILQVDKHNPRFLKLELFDGISYTEPLKNKSYEQR 242 Query: 241 KANDQNLS 248 K + + Sbjct: 243 KRQENQTT 250 >gi|332828499|gb|EGK01199.1| hypothetical protein HMPREF9455_02391 [Dysgonomonas gadei ATCC BAA-286] Length = 684 Score = 51.5 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 37/250 (14%), Positives = 89/250 (35%), Gaps = 2/250 (0%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K ++++ F M+ + +FI + + + + + +++L ++ Y ++ Sbjct: 5 KRLYTFVIQTFLPVFAMTFVICLFIVLMQFLWRYVEDLVGKGLDISVLAELFLYAAFQLI 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PM P + + ++ ELL I +G S + +KP++ L +SI F +N Sbjct: 65 PMALPLSLLLASLMAFGNLGERLELLSIKASGVSLLKAMKPLIILVAFISIGAFFFQNEA 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + ++ L + + E F+ + + + K N + ++ Sbjct: 125 MPRIQVKLRALLWSIKQKSPELDIPEGSFYSDIPNYNLYVKKKNRETKMLHEVMIYDTSK 184 Query: 182 QTHKI--YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + S + L H + + + + S + A S Sbjct: 185 GFDNMAVIVCDSALMRGSEDKTFLLLNLYHGQQFANFRQADVNSTSSRNNNQFAPYSREN 244 Query: 240 LKANDQNLSF 249 K + + F Sbjct: 245 FKEKEVIIPF 254 Score = 44.2 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 45/97 (46%), Gaps = 6/97 (6%) Query: 262 PELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWG 321 + + + E H++ T +IF I A A++R+ P+ +S+++ F V++ Sbjct: 383 QKNIRFHEVERHRKFTLSFACLIFFFIG---APLGAIIRKGGLGMPVVVSVAL-FIVYYI 438 Query: 322 FSYIIHKIEQNPYYIPI--LYLFLFCISSIFLLMIKK 356 I +K+ ++ + ++L F + + + + K Sbjct: 439 IDNIGYKMARDGVWEAWQGMWLSSFALFPLGVFLTYK 475 >gi|163782091|ref|ZP_02177090.1| hypothetical protein HG1285_18199 [Hydrogenivirga sp. 128-5-R1-1] gi|159882623|gb|EDP76128.1| hypothetical protein HG1285_18199 [Hydrogenivirga sp. 128-5-R1-1] Length = 357 Score = 51.5 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 46/355 (12%), Positives = 103/355 (29%), Gaps = 13/355 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F+ Y+L + F V + + + + + +L + LK + YLIP Sbjct: 1 MNIFDRYLLLNFLKVFSAISFVSVGLIVLYSLTDFL--LGFKETNLEVGLKYTLYLIPLG 58 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +++ + + + + G S + + ++LS Sbjct: 59 FYILSSLLVNIALIVLFRRFFSKGVDFTVQSFGISPLRFSAVFVGFTLVLSSLFLFLNES 118 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFF---RLDDDLYIKISKYNPNNTLQGIFIVD 177 P + + + L E L+F Y+ I + + + Sbjct: 119 FLPGLFKRVWYIEKTYKKKQEIGRLVERLWFVKKTSFGKYYVYIGSLDVTSGKFAGLFML 178 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 ++ + S I ++ G + + +F S + + + Sbjct: 179 RVSSEGKVKEVVEGKSGRWSGNVIYVDRGSAYNFGEGYFVRELKEF-SLSAEIGISEIGL 237 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 K S L+N + Y SE R + P+ +V Sbjct: 238 FAEKIQHVKSSSLINLYLKGGKL-GLDTDRYISEVLYRGGMSMLPL------VVLLPLLR 290 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 + + + + +S + V W + + P L + + +LL Sbjct: 291 DLFRYRSLRAGMLSFLVHLVVGWMVAVSPKLLADKANLSPGYALIAYSLLVPYLL 345 >gi|330443789|ref|YP_004376775.1| YjgP/YjgQ family protein [Chlamydophila pecorum E58] gi|328806899|gb|AEB41072.1| YjgP/YjgQ family protein [Chlamydophila pecorum E58] Length = 357 Score = 51.5 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 45/350 (12%), Positives = 105/350 (30%), Gaps = 9/350 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M ++ ++ L + +I LQ I + + + +++ Y IP + Sbjct: 1 MPILWKVLIFRYLKTILFC-ASSLIFISIISSLQEIVVYIAKDVPYATVFRLAAYQIPYL 59 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP + P + + ++ N ++ + +G S+ +I P+L ++I + F + + Sbjct: 60 LPFILPASCFISAYTLFKGLSDNNQITFLRASGASQGIIIFPILTISIAICCANFYTCSE 119 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + CR + A ++ L+ + I+ + + IV + Sbjct: 120 LASICRYKSCKEIANMAMSSPPLLLQTLQKREDSR---VFIAVDHFAKSKFDNVIVALKR 176 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 T I + V+ S + + E+ I Sbjct: 177 DDTISDVGIIKAIIPDSEADTVQAKDVVYISKLPSSLSTPYTSPAQEYYIETVQELLIPK 236 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLET-----YRSEFHKRLTQWLFPVIFGLISIVAADK 295 + + +L+ Y E +R L IV Sbjct: 237 VTATLFSGKSFMKSRTDYLTWKQLVRQAFYRTYIPETLRRAAIGLLCFTLTYSGIVIGTY 296 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC 345 + R+ ++ F L + + + + I+ +F Sbjct: 297 KPRFRKTHFLYFTFPILDLVLLIVGKNTKTTFMAFMFFLFPQIISWLVFI 346 >gi|317013268|gb|ADU83876.1| hypothetical protein HPLT_07455 [Helicobacter pylori Lithuania75] Length = 355 Score = 51.5 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 40/361 (11%), Positives = 101/361 (27%), Gaps = 9/361 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ + FL+ L + I L+ + + S N+++ Y I L Sbjct: 2 RLFKFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPD---SANMIILFFTYDILFALN 58 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + + ++ + + + G S+ ++ P+ +++ + Sbjct: 59 YTLPISLLLAMVLFYIAFIKSNQYTALLSIGFSKCQILSPIFLISLFFTAVYVGLNATPF 118 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + L K +L I N + ++ Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYFDKINPLLQKAQNIKVFRLKDKTLESY 178 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + I + + +K TI Sbjct: 179 AEAKEAFFEYKYWILHDTTIYEMPLSFELGANALSTTRLKTFKTLKNFRPKVLDTIYQNK 238 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 +++ L + + + + RS + P +S++ A + + Sbjct: 239 PAVSITDAL-LSLHALMRQNADTKKVRS---FLYVFAILPFFVPFLSVLIAYFSPSLARY 294 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL--FLFCISSIFLLMIKKKYTK 360 + + + + I V WG + + K + IP + + F ++ L KK + Sbjct: 295 ENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFVFLALSLWYFKKLNKR 354 Query: 361 I 361 + Sbjct: 355 L 355 >gi|118474677|ref|YP_891476.1| permease YjgP/YjgQ [Campylobacter fetus subsp. fetus 82-40] gi|118413903|gb|ABK82323.1| permease YjgP/YjgQ [Campylobacter fetus subsp. fetus 82-40] Length = 353 Score = 51.5 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 45/351 (12%), Positives = 101/351 (28%), Gaps = 7/351 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK F Y + F++ + + I L + S I L ++ T Sbjct: 1 MKLFSKYTGLVYLKYFIIIFMALELFYIGIDTLTNLKDFPKSANLQLIYLSLTAL---TA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P +M R+ EL+ + G S+ TLI ++++++ + Sbjct: 58 VNYVLPISLVFALIVSKINMIRSNELVSFYSLGISKNTLILSPFIISLIITCLYIYLSST 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 R F+ ++F + ++ Y I I +++D Sbjct: 118 SFAYAR----DYQKSLINFQGFNKSSNSIFLKYENKFIYIDELYPAIGEANKIKIFETQD 173 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 A+ + + + D ++ L S + Sbjct: 174 GDIIGQITAKKAKFEDNSWKLFDVDIISLPPRLELNATGYIENTQKELLILSGFKPRTIE 233 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 N ++ + ++ + FP+ L+ ++ + Sbjct: 234 NIYQTNSNYSITDAIDSLRTLKNEGINLNKIKSTLYSLIFFPLFAPLMVLILYYYLPITG 293 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 + + I WG +++ + N IP + + L I Sbjct: 294 RFFNLALASFIYVIVTLCIWGVLFVLIRFSLNGVIIPEIGVILPIIILASF 344 >gi|305667079|ref|YP_003863366.1| hypothetical protein FB2170_12551 [Maribacter sp. HTCC2170] gi|88708012|gb|EAR00250.1| hypothetical protein FB2170_12551 [Maribacter sp. HTCC2170] Length = 482 Score = 51.5 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 43/233 (18%), Positives = 79/233 (33%), Gaps = 10/233 (4%) Query: 24 VFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRN 83 +FI I I+ ++ + I+ K YL+P + V P + + ++ N Sbjct: 1 MFIFIFQTIWLFIDDLAGKGLDIIIIGKFLFYLMPNLTEKVLPLTVLLSSILTFGTLAEN 60 Query: 84 TELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFS 143 E + +G S + ++ + L F N + P I L Sbjct: 61 YEFAAMKASGISLQRAMLSLIVFIVFLGGVTFYFANSVIPASEQKIYNLRRNIAKVKPAV 120 Query: 144 YLEENLFF-RLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ---THKIYYAQSGSIDLDRQ 199 + E +F D+ IK+ K + N + + T+ + A+SG + Sbjct: 121 AIVEGVFSDFEGADMNIKVDKKHGENDRFLENVTIHQKTKTKVNSTVIKAKSGELKSSET 180 Query: 200 AII----LNDGEVHRKSPISKD--ISIMKFKSYTLQTESANSSTIVLKANDQN 246 + I L DG +R P S + F +T + N D + Sbjct: 181 SDILQLVLYDGHYYRDLPKSSKKAKNKHPFAKADFETYTMNIDLSEFNNVDMD 233 Score = 46.1 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 22/136 (16%), Positives = 50/136 (36%), Gaps = 7/136 (5%) Query: 225 SYTLQTESANSSTIVLKANDQNLSFLLNPN---PNNPNYRPELLETYRSEFHKRLTQWLF 281 L ++ A N S +LN R E+ + HK+ L Sbjct: 319 ENILDLYQDWQRIQLMGAAQTNASNILNSIQGKKKEFENRYEIYNRHIISLHKKYALALS 378 Query: 282 PVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI-LY 340 VI + A A++R+ P+ I++ + ++ + + ++N + I + Sbjct: 379 CVILFFVG---APLGAIIRKGGIGLPMVIAIVLFLTYYFIGVFAENYAKKNEIHPIIGAW 435 Query: 341 LFLFCISSIFLLMIKK 356 L + + +++ K+ Sbjct: 436 LSTMIMLPLSIVLTKR 451 >gi|308189157|ref|YP_003933288.1| hypothetical protein Pvag_3723 [Pantoea vagans C9-1] gi|308059667|gb|ADO11839.1| Uncharacterized protein [Pantoea vagans C9-1] Length = 204 Score = 51.5 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 25/188 (13%), Positives = 69/188 (36%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S L ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGEVPTNLVLTLLGLGVPQMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ ++ G S+ L+K + L + S+ ++ + Sbjct: 62 LILPLSLFLAILMTLGRLYTESEITVMHACGLSKAVLVKAAMVLMLFTSVVAAVNVIWLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P +++ A+ + + F D + + N +F+ R Sbjct: 122 PWSSRYQDEVTQNAKANPGAAAMAAGQFQTSSDGSAVLFVEDVKGNNFGNVFLAQLRPKG 181 Query: 183 THKIYYAQ 190 + + Sbjct: 182 NARPSWCW 189 >gi|254458642|ref|ZP_05072066.1| permease YjgP/YjgQ [Campylobacterales bacterium GD 1] gi|207084408|gb|EDZ61696.1| permease YjgP/YjgQ [Campylobacterales bacterium GD 1] Length = 355 Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 40/358 (11%), Positives = 99/358 (27%), Gaps = 9/358 (2%) Query: 5 ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 YI + F + + +V + SS + S N++L Y + M+ Sbjct: 3 FKYISFHYLKYFSVILIALVMFLVGFD---YMENASSLSSSANLVLIYLVYKAFFAIDML 59 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P + R+ L+ + G SR+ ++KP + ++ + + Sbjct: 60 LPLSLIFAMITTKIFLIRSNALVSFYSLGYSRVDVLKPFVVVSTTIIVIFVSL---HAIP 116 Query: 125 CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTH 184 S + S + + ++LFF D +GI + ++ Sbjct: 117 SFSRADEFSNNIRKNAAYLSPTKDLFFTYKDKYIYFAQMLPLQERAEGIRVFSIKENSLK 176 Query: 185 KIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAND 244 ++ A+ + + I D + + I L ++ + + Sbjct: 177 EVLVAKEATYRNESWHIAQADVITKPDNMSFESKGIKVDHEKGLDILHGFRPKMLDQVYE 236 Query: 245 QNLSFLLNPNPNNPNY---RPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 ++F + + + + + +K F +I A Sbjct: 237 GKVNFTIKNAIDALLLLSDQNINTRSIKGALYKIFIYPFFVPCLVVIIFFFVPISARFLN 296 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYT 359 I ++ + + P ++ + K + Sbjct: 297 VSLFSFGAILATLLVWGILFMLIELSNNKTIPSEAGVVAPVVILFLIALRQWRKYRLA 354 >gi|298207835|ref|YP_003716014.1| hypothetical protein CA2559_06260 [Croceibacter atlanticus HTCC2559] gi|83850473|gb|EAP88341.1| hypothetical protein CA2559_06260 [Croceibacter atlanticus HTCC2559] Length = 456 Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 16/132 (12%), Positives = 42/132 (31%), Gaps = 6/132 (4%) Query: 227 TLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFG 286 E + N N+ L++ N+ L Y H++ I Sbjct: 297 EYDLEGKLRVVTLAFNNMTNVGNLIDTRENSLKQINIKLNKYEIALHEKYVLAFACFILF 356 Query: 287 LISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--F 344 + A A++R+ P+ I++ + + + + ++ P + +L Sbjct: 357 FVG---APLGAIIRKGGMGLPMVIAILLFLTYHFIGIFAKNSA-EDGSISPFIATWLSTI 412 Query: 345 CISSIFLLMIKK 356 + + + + Sbjct: 413 IMLPLGVYFTYR 424 Score = 50.0 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 39/250 (15%), Positives = 83/250 (33%), Gaps = 7/250 (2%) Query: 27 AWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTEL 86 + + I+ ++ I+LK+ ++ P ++P+V P + + + N E Sbjct: 1 MILQSVWLYISELAGRELDGFIILKLLSFVAPKLIPLVLPLTILVTSIMTFGNFAENYEF 60 Query: 87 LIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLE 146 + ++G S ++ ++ LSI F N + P+ L + + Sbjct: 61 AAMKSSGISLQRAMRGLIIFIAALSITAFFFANNVIPRAEFEFVNLRKNIAKLKPAAAIS 120 Query: 147 ENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT---QTHKIYYAQSGSIDLDRQAIIL 203 E +F + D K I+ ++ + + A G + + +L Sbjct: 121 EGMFNEIGDINIKVGEKSGDRGQYLTDVIIHKKNEKRAGNYTVIKANKGELISSEGSDVL 180 Query: 204 NDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPE 263 + + I +Q + S A + +LS L N + + NY Sbjct: 181 SLV----LRDGNYYDEIQSNDPKEIQKKPFAKSYFKEYAINVDLSTLNNVDMEDRNYTGG 236 Query: 264 LLETYRSEFH 273 SE Sbjct: 237 SNMLKISELQ 246 >gi|330890525|gb|EGH23186.1| hypothetical protein PSYMO_17668 [Pseudomonas syringae pv. mori str. 301020] Length = 146 Score = 50.8 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 15/138 (10%), Positives = 41/138 (29%), Gaps = 15/138 (10%) Query: 220 IMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQW 279 ++K+ +Y S + S L +E R++ Sbjct: 1 MIKYDTYGAMLPKPEISEEITDREAIPTSEL----------TGNPAPRSVAELQWRISLP 50 Query: 280 LFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI--EQNPYYIP 337 L I L++I + ++ + + ++ + + + + P + Sbjct: 51 LSVFIVTLMAIPL---SRVNPRQGRYLKLLPAILLYMSYLAILISVRSSLEKGKLPLSLG 107 Query: 338 ILYLFLFCISSIFLLMIK 355 + ++ +S LL Sbjct: 108 MWWVHGIYLSIGLLLFYW 125 >gi|15605868|ref|NP_213245.1| hypothetical protein aq_359 [Aquifex aeolicus VF5] gi|14916753|sp|O66685|Y359_AQUAE RecName: Full=Uncharacterized protein aq_359 gi|2983036|gb|AAC06646.1| putative protein [Aquifex aeolicus VF5] Length = 356 Score = 50.8 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 43/361 (11%), Positives = 105/361 (29%), Gaps = 8/361 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y+L FL V + + +L + + L ++P Sbjct: 2 LLDRYLLSRFLGIFLNVSFVSVLLVSLYALLDFLVGFKEKRTD--VALSYFLNILPLGFY 59 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ ++ L + L + + G S + PVL ++ LS + Sbjct: 60 YISFITLSISLILFLRKVFEKKMELTVQSFGISPLRFSLPVLLFSVFLSSTFLLGNEYAF 119 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNN--TLQGIFIVDSRD 180 PK + + + +N +F ++ N + Sbjct: 120 PKLLGNLWFIEKNYKKKQEVKGFIKNFWFIKKENEVKTYYHVGNLNLSDGSLFNFYTMKV 179 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + + + + K++ L Sbjct: 180 ERKNLNPLEVLKVFSGVWKDKEIFIRSGEIYDFEKGKREKVFNKTFKLGLSIKEVELFSE 239 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K + +LS + + ++ Y E R+ L PV + S+ K ++ Sbjct: 240 KIDFLSLSEIFFLMQKSKKV-GLNVDVYTGELFYRVMFSLSPVFISIFSLYLFFKHKVL- 297 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 ++ P F+ + + I+ + P ++ +FL + S+ + +K + Sbjct: 298 --SQVIPRFLVFIVILWLVILSPKILPQKANQPVLYSLIPIFLLILYSLKGVYDLRKGFR 355 Query: 361 I 361 + Sbjct: 356 V 356 >gi|229495721|ref|ZP_04389449.1| permease, YjgP/YjgQ family [Porphyromonas endodontalis ATCC 35406] gi|229317295|gb|EEN83200.1| permease, YjgP/YjgQ family [Porphyromonas endodontalis ATCC 35406] Length = 658 Score = 50.4 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 18/145 (12%), Positives = 46/145 (31%), Gaps = 8/145 (5%) Query: 213 PISKDISIMKFKSYTLQTESANSSTIVLKAND--QNLSFLLNPNPNNPNYRPELLETYRS 270 + S T + A++ N++ L ++ Sbjct: 338 EQGAKRQQITLDSLYRMASPEQLETALKNASEKLHNMTELATFWDGAYQAEAYNFRSHSQ 397 Query: 271 EFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIE 330 E H++ T + ++F I + +R+ P+ S+ + F V++ + + Sbjct: 398 ERHRKFTFPVACIVFFFIGVPLGAL---IRKGGIGMPMVASILL-FVVYYMIDTLGFNLS 453 Query: 331 QNPYYIPI--LYLFLFCISSIFLLM 353 N + ++ F + I + Sbjct: 454 YNGTWPTWLGMWFSTFILLPIGAFL 478 >gi|91204945|ref|YP_537300.1| putative permeases [Rickettsia bellii RML369-C] gi|91068489|gb|ABE04211.1| Putative permeases [Rickettsia bellii RML369-C] Length = 362 Score = 50.4 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 32/361 (8%), Positives = 99/361 (27%), Gaps = 8/361 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K+ Y+ + + F + ++ + + + + + + + Y +P + Sbjct: 4 LKTLSWYLAKLYFKCFFIILSILIGLLIISNLFDLLQKFKNMYVPFDFFWRFILYKVPYL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V+ L ++ +N EL I ++G ++ + ++L I N Sbjct: 64 LNQVSALISFTSMLFFLRNLTKNNELTAILSSGIHIWQVLIIPYIVTLILGIVFTTILNP 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS----KYNPNNTLQGIFIV 176 I L AK + + L K ++ + + I Sbjct: 124 IGALGLQKYDLLEAKLTKKTHNEAVISKSGLLFFEALNGKNQIIQTQFINISEKKLNNIT 183 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + + ++ + + + + Sbjct: 184 VLFIDNNNNFLKRIDALYGIIENKSLHLNRVKVFTKDSTEAHNNL---TIPTNLSVNSLV 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 ++ L + + Y+ ++K+L + + +++ + Sbjct: 241 NKFTHPEMVSIWKL-PKLIDELLNSGLPITNYQVYYYKQLFKPAMMIATIILASCFISLK 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 ++KI + + + IL + +++ Sbjct: 300 QRDNSQEKILILGLFSGFIVYSLSEILLKVLTYNNLSLIAAILLPSMLIFFISNFIILHY 359 Query: 357 K 357 K Sbjct: 360 K 360 >gi|157827727|ref|YP_001496791.1| putative permeases [Rickettsia bellii OSU 85-389] gi|157803031|gb|ABV79754.1| Putative permeases [Rickettsia bellii OSU 85-389] Length = 362 Score = 50.4 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 32/361 (8%), Positives = 99/361 (27%), Gaps = 8/361 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K+ Y+ + + F + ++ + + + + + + + Y +P + Sbjct: 4 LKTLSWYLAKLYFKCFFIILFILIGLLIISNLFDLLQKFKNMYVPFDFFWRFILYKVPYL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V+ L ++ +N EL I ++G ++ + ++L I N Sbjct: 64 LNQVSALISFTSMLFFLRNLTKNNELTAILSSGIHIWQVLIIPCIVTLILGIVFTTILNP 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS----KYNPNNTLQGIFIV 176 I L AK + + L K ++ + + I Sbjct: 124 IGALGLQKYDLLEAKLTKKTHNEAVISKSGLLFFEALNGKNQIIQTQFINISEKKLNNIT 183 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + + ++ + + + + Sbjct: 184 VLFIDNNNNFLKRIDALYGIIENKSLHLNRVKVFTKDSTEAHNNL---TIPTNLSVNSLV 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 ++ L + + Y+ ++K+L + + +++ + Sbjct: 241 NKFTHPEMVSIWKL-PKLIDELLNSGLPITNYQVYYYKQLFKPAMMIATIILASCFISLK 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 ++KI + + + IL + +++ Sbjct: 300 QRDNSQEKILILGLFSGFIVYSLSEILLKVLTYNNLSLIAAILLPSMLIFFISNFIILHY 359 Query: 357 K 357 K Sbjct: 360 K 360 >gi|315452594|ref|YP_004072864.1| Integral membrane protein [Helicobacter felis ATCC 49179] gi|315131646|emb|CBY82274.1| Integral membrane protein [Helicobacter felis ATCC 49179] Length = 348 Score = 50.0 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 108/314 (34%), Gaps = 14/314 (4%) Query: 44 ESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPV 103 S LL++ YL+P L + P F L ++ + ELL+ + G + +++ Sbjct: 44 LSALDLLQLYFYLLPGTLFFIIPITFFGACVIGLARLSYDHELLVFFSLGIAPRQIVRAF 103 Query: 104 LFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISK 163 L L +++S L + I+ P +S + + + +L D L Sbjct: 104 LPLCLVVSALLLVFSLILVPASKSAYYSFLRDKKERVDVNIQAGEFGQKLGDWLVYV--G 161 Query: 164 YNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKF 223 + N + + T A+ G I L + + + F Sbjct: 162 KSQNGVFGDLVLFSHSGLSTESFIIAKEGRIRNQNGLFELELDHGNAYFAAKGQVRKVHF 221 Query: 224 KSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPV 283 K L+ + A +++ + L + + + +R TQ + Sbjct: 222 KELILKNKPA--------LSERKDAAYLYGHDFIGYWGKAFGAHPNAHQQRRFTQAILVA 273 Query: 284 IFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 +F L S+ + R + ++ + I+ G+++ +II + I + +++ Sbjct: 274 LFPLASLFCIPLFGIANPRYAKNLSYVYVLITTGIYFLLMHIISQDFPLVGTISLPIVWM 333 Query: 344 FCISSIFLLMIKKK 357 + + K Sbjct: 334 LG----SYWLYRYK 343 >gi|153875332|ref|ZP_02003181.1| permease YjgP/YjgQ [Beggiatoa sp. PS] gi|152068203|gb|EDN66818.1| permease YjgP/YjgQ [Beggiatoa sp. PS] Length = 218 Score = 50.0 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 22/186 (11%), Positives = 57/186 (30%), Gaps = 17/186 (9%) Query: 161 ISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGS--IDLDRQAIILNDGEVHRKSPISKDI 218 + + + V I A G I ++L DG + P + + Sbjct: 1 MENIDNESNTMQTLFVQVNLPHKRVIMVADRGYQVIQEGELFMVLIDGYRYESPPGALNY 60 Query: 219 SIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQ 278 + +F + ++ + + + L + ++E RL+ Sbjct: 61 IVTQFAEHRIRVPKRLDTPKNDRRDAIPTDLLWFAKE----------PSLQAELQWRLSL 110 Query: 279 WLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN--PYYI 336 L + L++ +A ++ + I + I + +E+ P +I Sbjct: 111 PLTVI---LLAALAVPLSHTTPRQGQYAKILFGILIYLIYNNLLNVAKKWVERGDVPPWI 167 Query: 337 PILYLF 342 + ++ Sbjct: 168 GVWWVH 173 >gi|283955738|ref|ZP_06373229.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni 1336] gi|283792693|gb|EFC31471.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni 1336] Length = 352 Score = 50.0 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 41/361 (11%), Positives = 93/361 (25%), Gaps = 13/361 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F +I ++F + ++ I +L + + N+ L +L + Sbjct: 1 MWIFFRFISGIYLKNFFIIFFSLLGFYCGIDLLLNFKDLPK---AANLDLLYVMFLSFSA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P V P L SM R E + + G SR +I A+ Sbjct: 58 VPYVLPISLIFALVVSLISMIRANEFVSLYALGLSRNYVILFPFLWALFFCCVYIGLNFT 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + + + ++ L + N I Sbjct: 118 SFAYANDYKR------NILKNGTIMNQSGEVFLKFNNNFVYISKINNGQNSAQNIKIFNI 171 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI----SKDISIMKFKSYTLQTESANSS 236 + + + + + ++ IL DG + + + I F Sbjct: 172 NDLNLSSFVSAKNAHFEGESWILRDGNITLLPKNYELANDGLKIQDFSELKSLEGFKPKI 231 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + +N + + + + +K + F LI Sbjct: 232 IEGVASNSDYSISDALESFELFKAQNVNTDALKINLYKFVFTPFFAPFLMLIMYYFFPVI 291 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 A + I +++ + + I I+ + + K Sbjct: 292 ARFFNLAIVTFIAFVVTLMIWGILFLLTRLSENSVIASEIGIVVPIIILGCLSAYMYYKH 351 Query: 357 K 357 + Sbjct: 352 R 352 >gi|114569776|ref|YP_756456.1| permease YjgP/YjgQ family protein [Maricaulis maris MCS10] gi|114340238|gb|ABI65518.1| permease YjgP/YjgQ family protein [Maricaulis maris MCS10] Length = 365 Score = 50.0 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 43/344 (12%), Positives = 106/344 (30%), Gaps = 7/344 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS-TESLNILLKISGYLIPTVL 61 Y+ L++ L I + ++ +++ V + S LL ++ P +L Sbjct: 5 RLNRYMASQTAGGLLLAFLTIATVIILVDFVEQSRAVGTRVDVSTLDLLGLTLLRAPALL 64 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PF F T L +NR++EL+++ +G S ++ + LA+ + I N + Sbjct: 65 ESTLPFVFLFGTLTSLFRLNRSSELIVMRASGISAWRILTAPMVLAVGIGIIGATGLNPL 124 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 + + E+ ++ R + + + + Sbjct: 125 AATLNAEFEARRDSLMNVRRVEGAEQPVWLRETNIDGFTVIAATQLEEARQVLRNPVFLQ 184 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI--- 238 +D ++ L G I + + + + ++ + Sbjct: 185 FAEDASGTPRLERRIDAESAELRAGFWEVTGAIERTPTPSRLDLGAIAMPTSINRQALFE 244 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 ++ + + L + + Y H L L + LI+ A Sbjct: 245 RARSAEGVAFWDLPRLITSAREAGLATQRYELRLHALLALPLTLLASTLIAAAATL---R 301 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 + + ++ I+ V + F ++ + P + Sbjct: 302 LHRLGGAAAFAMAGGIAGFVMFFFQEMLSSFGVSGALPPATAAW 345 >gi|315636695|ref|ZP_07891925.1| conserved hypothetical protein [Arcobacter butzleri JV22] gi|315479010|gb|EFU69713.1| conserved hypothetical protein [Arcobacter butzleri JV22] Length = 338 Score = 49.6 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 56/356 (15%), Positives = 123/356 (34%), Gaps = 19/356 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y+ + +F + FI VI +++ L + T + L +I Y IP ++ Sbjct: 2 KLQRYLYSQLAITFFPIFFGLFFITAVIFLVKISALTAIITVNFFELFRIFSYTIPDIIF 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P F + L+ ++ EL +I + G + ++K L L +LL++ L + + Sbjct: 62 YTMPISFFISMVITLSKLSSEYELTVITSFGLNPFKILKIFLPLTLLLTLLLLVVSVGLI 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 PK KQ + F+ + D L K N + Sbjct: 122 PKTDFERKQFVNIKKNEANFNIKSGEFGQKFGDWLIFINDKKNNLYEDVKLL---KVQND 178 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + +++ +D D+ + + E ++ + + +++ + +++ T V Sbjct: 179 NDQFVISKNAVLDNDKGVLSIRLAEGKAFLIEKEEFNQINYEAMYINDSISSAKTTVFTT 238 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + + + LT ++ F L+S+ R Sbjct: 239 TYDYWKDNIKNKVDLDD----------------LTFFILTSFFPLMSLFLVITFGYFNPR 282 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + + + IS +++ I I L+L ++ IKK+Y Sbjct: 283 YEKNRAIMYSLISIVLYYVLIKSIGDKIFLHTLYIIPILWLSGTYFLYSKTIKKEY 338 >gi|33519519|ref|NP_878351.1| putative inner membrane protein [Candidatus Blochmannia floridanus] gi|33517182|emb|CAD83564.1| putative inner membrane protein; predicted permease [Candidatus Blochmannia floridanus] Length = 370 Score = 49.6 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 46/356 (12%), Positives = 118/356 (33%), Gaps = 13/356 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 YI++ I ++ L+ + ++ + + ++ ++L S+ + + IP + Sbjct: 2 ILIKYIMKEICKNQLIILILLLLACFCQKSIKVLSL--SNNIPIYWIFLYLFLSIPDLGK 59 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ PF + ++ + E+L + + ++ LI+ + + +++I I+ + Sbjct: 60 LIIPFSLFLSVLISCYRLHMHNEILAMYSCAVNKYVLIQSICMYSTVIAILSLINLAYLA 119 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P C + + K + F L E F+ L D+ + N L +FI+ Sbjct: 120 PHCEQYKENIFFKMKKNTYFIELIEKKFYLLFDEHLVLFIDNIKNGMLNHVFILKRVQNI 179 Query: 183 THKIYYAQSG-----SIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 ++ + + + ++ ++ + + + Sbjct: 180 DKNVFSIITADQGSIHYNFNDKSQLIILQSGMYYEIHNTQLLCIPRFVTYFNQYRTLVHD 239 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 D N S + N E + RLT ++ I +I++ A Sbjct: 240 KYQFLRDVNKSV---KHMNINQLLISSELESYIELNWRLTLFISVFIMPMIALFVMMNIA 296 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + + + F + I ++++ I LLM Sbjct: 297 Y---GYLSNFLLAVVLYVFFYMLHIMLYTCSVLNYMNIIILMWIINCIYLIILLLM 349 >gi|301346544|ref|ZP_07227285.1| permease YjgP/YjgQ family protein [Acinetobacter baumannii AB056] Length = 164 Score = 49.6 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 25/148 (16%), Positives = 51/148 (34%), Gaps = 8/148 (5%) Query: 203 LNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRP 262 L G + P + +F+SY L+ E+ + + L N+P Sbjct: 6 LVQGRRYEIFPGQPKYTQAEFQSYRLRLENDKDVKFESGDVEALSTSKLFSKANDPV--- 62 Query: 263 ELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGF 322 RSE RL +I ++S+ ++ + ++ P + + Sbjct: 63 -----VRSELGWRLFGPFTIIIALMLSVALSEVSPRQGRYYRLIPSIFIFASLIVLMIAI 117 Query: 323 SYIIHKIEQNPYYIPILYLFLFCISSIF 350 I K E + + P+ L +++F Sbjct: 118 KTRISKGELDIWAYPVALLVYAIAAALF 145 >gi|332520665|ref|ZP_08397127.1| permease YjgP/YjgQ family protein [Lacinutrix algicola 5H-3-7-4] gi|332044018|gb|EGI80213.1| permease YjgP/YjgQ family protein [Lacinutrix algicola 5H-3-7-4] Length = 540 Score = 49.6 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 10/113 (8%), Positives = 39/113 (34%), Gaps = 6/113 (5%) Query: 246 NLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKI 305 + + ++ N + L + H++ L +I + +R+ Sbjct: 318 STTQIIQSKEANLKTKSNWLNRHIIALHEKFALALACIILFFVGAPLGAL---IRKGGLG 374 Query: 306 HPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--FCISSIFLLMIKK 356 P+ I++ + + + + ++ + P L + + + + + ++ Sbjct: 375 LPMVIAIVLFLTYHFIGIFAKNSA-KDGTFNPALATWFSTLIMLPLSIYLTRR 426 Score = 38.8 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 47/269 (17%), Positives = 94/269 (34%), Gaps = 16/269 (5%) Query: 24 VFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRN 83 + I + I I ++ ++K Y+ PT++P++ P + + V + N Sbjct: 1 MLIFVLQAIWLYIKELAGKDLDPATIVKFLFYITPTLIPLILPLTILLASIMVFGNFAEN 60 Query: 84 TELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFS 143 E + +TG S + + + LSI F N + P L Sbjct: 61 YEFAAMKSTGISLQRAMSGLSVFIVALSITTFFFSNNVIPWAEYNSFNLRKNIAKVKPAM 120 Query: 144 YLEENLFFRLDDDLYIKISKYN----PNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQ 199 + E F ++ + IK+SK I K A++G + + Sbjct: 121 AIAEGQFNQIGEGFNIKVSKKTGDRGQFLEKVVIHQGQKSKPGNFKTIIAENGELVSAEK 180 Query: 200 AI----ILNDGEVHRKSPISKDISIMK-------FKSYTLQTESANSSTIVLKANDQNLS 248 + IL +G + +P ++ F YT+ + + + + L + Sbjct: 181 SDILKLILFNGYYYDDTPPKDYKERLRKPFAKSIFDKYTMNIDLSQLNAVDLDDKSTDNK 240 Query: 249 FLLNPNPNNPNYRPELLETYRSEFHKRLT 277 + + N + NY + L T R E ++ Sbjct: 241 YSM-LNISQLNYTTDSLHTERQEVYELFA 268 >gi|157414610|ref|YP_001481866.1| hypothetical protein C8J_0290 [Campylobacter jejuni subsp. jejuni 81116] gi|157385574|gb|ABV51889.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni 81116] gi|315931610|gb|EFV10576.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 327] Length = 352 Score = 49.6 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 41/361 (11%), Positives = 93/361 (25%), Gaps = 13/361 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F +I ++F + ++ I +L + + N+ L +L + Sbjct: 1 MWIFFRFISGIYLKNFFIIFFSLLGFYCGIDLLLNFKDLPK---AANLDLLYVMFLSFSA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P V P L SM R E + + G SR +I A+ Sbjct: 58 VPYVLPISLIFALVVSLISMIRANEFVSLYALGLSRNYVILFPFLWALFFCCIYIGLNFT 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + + + ++ L + N I Sbjct: 118 SFAYANDYKR------NILKNGTIMNQSGEVFLKFNNNFVYISKINNGQNSAQNIKIFNI 171 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI----SKDISIMKFKSYTLQTESANSS 236 + + + + + ++ IL DG + + + I F Sbjct: 172 NDLNLSSFVSAKNAHFEGESWILRDGNITLLPKNYELANDGLKIQDFSELKSLEGFKPKI 231 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + +N + + + + +K + F LI Sbjct: 232 IEGVASNSDYSISDALESFELFKAQNVNTDALKINLYKFVFTPFFAPFLMLIMYYFFPVI 291 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 A + I +++ + + I I+ + + K Sbjct: 292 ARFFNLAFVTFIAFVVTLMIWGVLFLLTRLSENSVIASEIGIVVPIIILGCLSAYMYYKH 351 Query: 357 K 357 + Sbjct: 352 R 352 >gi|291298015|ref|YP_003509293.1| hypothetical protein Snas_0485 [Stackebrandtia nassauensis DSM 44728] gi|290567235|gb|ADD40200.1| hypothetical protein Snas_0485 [Stackebrandtia nassauensis DSM 44728] Length = 623 Score = 49.2 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 27/84 (32%), Gaps = 2/84 (2%) Query: 280 LFPVIFGLISIVAADKRALVRQRKKIHPIFISL--SISFGVFWGFSYIIHKIEQNPYYIP 337 V LI +A + A ++ I + ++ I FGV Sbjct: 417 WAVVALPLIGTIAMLRPASAGFKRLISAVLAAVINVIVFGVAAAVYLFAVSQILAASLPG 476 Query: 338 ILYLFLFCISSIFLLMIKKKYTKI 361 L + L + M+ + Y +I Sbjct: 477 WLQVLLIGLIGAVAWMLLRPYRRI 500 >gi|121612521|ref|YP_001000023.1| hypothetical protein CJJ81176_0335 [Campylobacter jejuni subsp. jejuni 81-176] gi|87250256|gb|EAQ73214.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 81-176] Length = 352 Score = 49.2 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 41/361 (11%), Positives = 94/361 (26%), Gaps = 13/361 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F +I ++F + ++ I +L + + N+ L +L + Sbjct: 1 MWIFFRFISGIYLKNFFIIFFSLLGFYCGIDLLLNFKDLPK---AANLDLLYVMFLSFSA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P V P L SM R E + + G SR +I A+ Sbjct: 58 VPYVLPISLIFALVVSLISMIRANEFVSLYALGLSRNYVILFPFLWALFFCCIYIGLNFT 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + + + ++ L + N I Sbjct: 118 SFAYANDYKR------NILKNGTIMNQSGEVFLKFNNNFVYISKINNGQNSAQNIKIFNI 171 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI----SKDISIMKFKSYTLQTESANSS 236 + + + + + ++ IL DG + + + I F Sbjct: 172 NDLNLSSFVSAKNAHFEGESWILRDGNITLLPKNYELANDGLKIQDFSELKSLEGFKPKI 231 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + +N + + +T + +K + F LI Sbjct: 232 IEGVASNSDYSISDALESFELFKAQNVNTDTLKINLYKFVFTPFFAPFLMLIMYYFFPVI 291 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 A + + +++ + + I I+ + + K Sbjct: 292 ARFFNLAIVTFVTFVVTLMIWGVLFLLTRLSENSVIASEIGIVVPIIILGCLSAYMYYKH 351 Query: 357 K 357 + Sbjct: 352 R 352 >gi|86149085|ref|ZP_01067317.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni CF93-6] gi|88597305|ref|ZP_01100540.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 84-25] gi|218561972|ref|YP_002343751.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85840443|gb|EAQ57700.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni CF93-6] gi|88190366|gb|EAQ94340.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 84-25] gi|112359678|emb|CAL34464.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284925585|gb|ADC27937.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni IA3902] gi|315928386|gb|EFV07700.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315930530|gb|EFV09573.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 305] Length = 352 Score = 49.2 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 43/361 (11%), Positives = 95/361 (26%), Gaps = 13/361 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F +I ++F + ++ I +L + + N+ L +L + Sbjct: 1 MWIFFRFISGIYLKNFFIIFFSLLGFYCGIDLLLNFKDLPK---AANLDLLYVMFLSFSA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P V P L SM R E + + G SR +I A+ Sbjct: 58 VPYVLPISLIFALVVSLISMIRANEFVSLYALGLSRNYVILFPFLWALFFCCIYIGLNFT 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + + + ++ L + N I Sbjct: 118 SFAYANDYKR------NILKNGTIMNQSGEVFLKFNNNFVYISKINNGQNSAQNIKIFNI 171 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI----SKDISIMKFKSYTLQTESANSS 236 + +A + + + ++ IL DG + + + I F Sbjct: 172 NDLNLSSFASAKNAHFEGESWILRDGNITLLPKNYELANDGLKIQDFSELKSLEGFKPKI 231 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + +N + + +T + +K + F LI Sbjct: 232 IEGVASNSDYSISDALESFELFKAQNVNTDTLKINLYKFVFTPFFAPFLMLIMYYFFPVI 291 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 A + I +++ + + I I+ + + K Sbjct: 292 ARFFNLAFVTFIAFVVTLMIWGVLFLLTRLSENSVIASEIGIVVPIIILGCLSAYMYYKH 351 Query: 357 K 357 + Sbjct: 352 R 352 >gi|86151428|ref|ZP_01069643.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 260.94] gi|86153749|ref|ZP_01071952.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|315123881|ref|YP_004065885.1| hypothetical protein ICDCCJ07001_285 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85841775|gb|EAQ59022.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 260.94] gi|85842710|gb|EAQ59922.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|307747250|gb|ADN90520.1| Putative membrane protein [Campylobacter jejuni subsp. jejuni M1] gi|315017603|gb|ADT65696.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 352 Score = 49.2 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 40/361 (11%), Positives = 93/361 (25%), Gaps = 13/361 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F +I ++F + ++ I +L + + N+ L +L + Sbjct: 1 MWIFFRFISGIYLKNFFIIFFSLLGFYCGIDLLLNFKDLPK---AANLDLLYVMFLSFSA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P V P L SM R E + + G SR +I A+ Sbjct: 58 VPYVLPISLIFALVVSLISMIRANEFVSLYALGLSRNYVILFPFLWALFFCCIYIGLNFT 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + + + ++ L + N I Sbjct: 118 SFAYANDYKR------NILKNGTIMNQSGEVFLKFNNNFVYISKINNGQNSAQNIKIFNI 171 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI----SKDISIMKFKSYTLQTESANSS 236 + + + + + ++ IL DG + + + + F Sbjct: 172 NDLNLSSFVSAKNAHFEGESWILRDGNITLLPKNYELANDGLKLQDFSELKSLEGFKPKI 231 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + +N + + + + +K + F LI Sbjct: 232 IEGVASNSDYSISDALESFELFKAQNVNTDALKINLYKFVFTPFFAPFLMLIMYYFFPVI 291 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 A + I +++ + + I I+ + + K Sbjct: 292 ARFFNLAFVTFIAFVVTLMIWGVLFLLTRLSENSVIASEIGIVVPIIILGCLSAYMYYKH 351 Query: 357 K 357 + Sbjct: 352 R 352 >gi|205356037|ref|ZP_03222805.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni CG8421] gi|205346161|gb|EDZ32796.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni CG8421] Length = 352 Score = 49.2 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 41/361 (11%), Positives = 94/361 (26%), Gaps = 13/361 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F +I ++F + ++ I +L + + N+ L +L + Sbjct: 1 MWIFFRFISGIYLKNFFIIFFSLLGFYCGIDLLLNFKDLPK---AANLDLLYVMFLSFSA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P V P L SM R E + + G SR +I A+ Sbjct: 58 VPYVLPISLIFALVVSLISMIRANEFVSLYALGLSRNYVILFPFLWALFFCCIYIGLNFT 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + + + ++ L + N I Sbjct: 118 SFAYANDYKR------NILKNGTIMNQSGEVFLKFNNNFVYISKINNGQNSAQNIKIFNI 171 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI----SKDISIMKFKSYTLQTESANSS 236 + + + + + ++ IL DG + + + I F Sbjct: 172 NDLNLSSFVSAKNAHFEGESWILRDGNITLLPKNYELANDGLKIQDFSELKSLEGFKPKI 231 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + +N + + +T + +K + F LI Sbjct: 232 IEGVASNSDYSISDALESFELFKAQNVNTDTLKINLYKFVFTPFFAPFLMLIMYYFFPVI 291 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 A + + +++ + + I I+ + + K Sbjct: 292 ARFFNLAIVTFVAFVVTLMIWGVLFLLTRLSENSVIASEIGIVVPIIILGCLSAYMYYKH 351 Query: 357 K 357 + Sbjct: 352 R 352 >gi|153951775|ref|YP_001398642.1| hypothetical protein JJD26997_1652 [Campylobacter jejuni subsp. doylei 269.97] gi|152939221|gb|ABS43962.1| putative membrane protein [Campylobacter jejuni subsp. doylei 269.97] Length = 352 Score = 48.8 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 41/361 (11%), Positives = 90/361 (24%), Gaps = 13/361 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F +I ++F + ++ I +L + + N+ L +L + Sbjct: 1 MWIFFRFISGIYLKNFFIIFFSLLGFYCGIDLLLNFKDLPK---AANLDLLYVMFLSFSA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P V P L SM R E + G SR +I A+ Sbjct: 58 VPYVLPISLIFALVVSLISMIRANEFVSFYALGLSRNYVILFPFLWALFFCCIYIGLNFT 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + + + ++ L + N I Sbjct: 118 SFAYANDYKR------NILKNGTIMNQSGEVFLKFNNNFVYISKINNGQNSAQNIKIFNI 171 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGE----VHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + + + ++ IL DG + + I F Sbjct: 172 NDFNLSSFVSAKNAHFEGESWILRDGNIALLPKNYELANDGLKIQDFSELKSLEGFKPKI 231 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + +N + + + + +K + F LI Sbjct: 232 IEGVASNSDYSISDALESFELFKAQNVNTDALKINLYKFIFTPFFAPFLMLIMYYFFPVI 291 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 A + I + + + + I I+ + + K Sbjct: 292 ARFFNLAFVTFIAFVVILMVWGVLFLLTRLSENSVIASEIGIVVPIIILGCLSAYMYYKH 351 Query: 357 K 357 + Sbjct: 352 R 352 >gi|270295684|ref|ZP_06201885.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270274931|gb|EFA20792.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 617 Score = 48.8 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 26/195 (13%), Positives = 71/195 (36%), Gaps = 6/195 (3%) Query: 12 IGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAM 71 +F + I + + + ++ + + +L + Y +++P P + Sbjct: 3 FMGTFFICLF----IFMMQFLWRYVDEMVGKGLEMTVLAQFFFYSALSLVPASLPLAILL 58 Query: 72 ETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQ 131 + ELL + G S + +++P++ + F +N+I PK ++ + Sbjct: 59 AALITFGNFGERFELLAMKAAGISLLKIMRPLIIFICFICCVSFYFQNVIGPKAQTKLWT 118 Query: 132 LSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ--THKIYYA 189 L + + E +F+ D + + N + ++ + + +I + Sbjct: 119 LLISMKQKSPEVDIPEGVFYDEIDGYNLYVKHKNRKTGMLYDVLIYNFEKGFENAQIIKS 178 Query: 190 QSGSIDLDRQAIILN 204 SG +++ L Sbjct: 179 DSGRLEMTADKQHLY 193 >gi|295917939|gb|ADG60246.1| permease YjgP/YjgQ [uncultured bacterium] Length = 122 Score = 48.8 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 15/101 (14%), Positives = 39/101 (38%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YILR + + + + ++L+ VS+ + ++ ++ L+P + Sbjct: 22 IDRYILRLVLVPMFGVFILAASLLMLEKMLRLFEFVSTQGGPVQVVFRMLVNLVPEYAGL 81 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVL 104 P + + ++EL ++ G S L++ Sbjct: 82 AIPLGLMLGILLAFRKLATSSELDVMRAVGMSYSRLLRVPY 122 >gi|32266101|ref|NP_860133.1| hypothetical protein HH0602 [Helicobacter hepaticus ATCC 51449] gi|32262150|gb|AAP77199.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449] Length = 339 Score = 48.8 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 54/355 (15%), Positives = 124/355 (34%), Gaps = 17/355 (4%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 F+ Y+ + F L ++FIA V+ ++ S L + YLIP L Sbjct: 2 FKRYLFMSFAQIFFPFFLVLLFIASVVLLIDIAGRTYVIKMSFIDLGTLFLYLIPGSLFF 61 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 + P F + + + EL++ + G + ++K L + +L +I LF+ ++ P Sbjct: 62 IIPITFFAALVLSVAKLTYDYELMVCFSLGAKPLDIVKFFLPITLLATIILFVFSLVMLP 121 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 S K A+ + + + +L D L + + + + Sbjct: 122 LANSASKNFVAQKKADIDVNIKSGEFGQKLGDWLVYV--DSAHKRIYKNLILFSENGFEG 179 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 A+SG + ++ LN E +++ + + +++ + Sbjct: 180 DTFIVAESGKTNNNQGLFELNLQEGSAYFASPEELKRVDYHQMSVRQNVSEPQLRSYDLF 239 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 + + + + P ++L Q + +F L S+ + R Sbjct: 240 EYWGNVFTSDSHQKP---------------RKLAQAVMVSLFPLTSLFLVPLFGIANPRF 284 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + + + S +++ ++I + I I +L+ ++ I K Y Sbjct: 285 HSNMSYFYVIASVALYFVLTHIASEHFPLIGMIIIPFLWCALSFGLYKKFITKFY 339 >gi|315057734|gb|ADT72063.1| Permease YjgP/YjgQ [Campylobacter jejuni subsp. jejuni S3] Length = 352 Score = 48.8 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 41/361 (11%), Positives = 93/361 (25%), Gaps = 13/361 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F +I ++F + ++ I +L + + N+ L +L + Sbjct: 1 MWIFFRFISGIYLKNFFIIFFSLLGFYCGIDLLLNFKDLPK---AANLDLLYVMFLSFSA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P V P L SM R E + + G SR +I A+ Sbjct: 58 VPYVLPISLIFALVVSLISMIRANEFVSLYALGLSRNYVILFPFLWALFFCCIYIGLNFT 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + + + ++ L + N I Sbjct: 118 SFAYANDYKR------NILKNGTIMNQSGEVFLKFNNNFVYISKINNGQNSAQNIKIFNI 171 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI----SKDISIMKFKSYTLQTESANSS 236 + + + + + ++ IL DG + + + I F Sbjct: 172 NDLNLSSFVSAKNAYFEGESWILRDGNITLLPKNYELANDGLKIQDFSELKSLEGFKPKI 231 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + +N + + + + +K + F LI Sbjct: 232 IEGVASNSDYSISDALESFELFKAQNVNTDALKINLYKFVFTPFFAPFLMLIMYYFFPVI 291 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 A + I +++ + + I I+ + + K Sbjct: 292 ARFFNLAFVTFIAFVVTLMIWGVLFLLTRLSENSVIASEIGIVVPIIILGCLSAYMYYKH 351 Query: 357 K 357 + Sbjct: 352 R 352 >gi|327537720|gb|EGF24427.1| hypothetical protein RBWH47_05036 [Rhodopirellula baltica WH47] Length = 430 Score = 48.8 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 25/208 (12%), Positives = 62/208 (29%), Gaps = 5/208 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSS---TESLNILL-KISGYL 56 M + Y+L R+ + L + I V ++ + + +SL ++L K G Sbjct: 1 MTQIDRYVLILFLRTVCVCFLSLAGIFIVFHAFTAMDDLIAQSKVGDSLPLVLAKFYGPY 60 Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 + + M M + R EL + G S +++P++ ++ + Sbjct: 61 LLLLFDMTGTIITLMAFLFTAGWLRRTGELTATLSAGVSHGRILRPMIIASLAIISVQLA 120 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + + P+ R ++ + + + + + F + Sbjct: 121 NREWVIPRFRDSLTMKAKNL-SGDIEQAVMPTYDQSSGILIEGDKLRTLGRVISRPNFRL 179 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILN 204 S + A+ Sbjct: 180 YSEYAGFGDVLLAREAIWWDPEAMAEWR 207 >gi|237718006|ref|ZP_04548487.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|229452647|gb|EEO58438.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] Length = 380 Score = 48.8 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 17/130 (13%), Positives = 53/130 (40%), Gaps = 6/130 (4%) Query: 229 QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 + +N++ L + +++E+HK++T L ++F I Sbjct: 78 SLTQKQKVISSAVSRAENVANDLGFKKFTMENNDYSIRKHKTEWHKKITISLSCLLFFFI 137 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--FCI 346 A ++R+ P+ +S+ + F +++ +K+ ++ +I + ++ + Sbjct: 138 G---APLGGIIRKGGLGMPVIVSV-LVFIIYYIIDNTGYKMARDGKWIVWMGMWTSSAVL 193 Query: 347 SSIFLLMIKK 356 + + + + K Sbjct: 194 APLGVFLTYK 203 >gi|320449377|ref|YP_004201473.1| putative permease, YjgP/YjgQ family [Thermus scotoductus SA-01] gi|320149546|gb|ADW20924.1| putative permease, YjgP/YjgQ family [Thermus scotoductus SA-01] Length = 368 Score = 48.8 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 46/377 (12%), Positives = 107/377 (28%), Gaps = 32/377 (8%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + ++L+ L++ LF+ + + L + + Y +P VL Sbjct: 2 TLYRHLLKESLPVLLLALLFLTAVYLFGFFYAGARWL--EGVPLWKVARWLSYHVPGVLV 59 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 V P T V ++ + + G P++ + LLS + + Sbjct: 60 QVFPIALVTTTVLVFGRLSAEGAQFALLSGGVPLWRAALPLVGIGALLSGVALYLQERLV 119 Query: 123 PKCRST-IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P + + + L + + ++ + S Sbjct: 120 PHYNEKVRVAWWDEIHTQGAGLFRLKGLQIPIGKGRNLYFEDFDMEKKEMVGVRIASFQG 179 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPIS------------------KDISIMKF 223 + +A+ GS + + I L D R + +S K Sbjct: 180 EEGTFLFAERGSW--EDKRITLRDYRFFRIDFQEIPRLETASDLLAQTRKVFRVVSQGKI 237 Query: 224 KSYTLQTESANSSTIVLKAND--QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLF 281 A + Q+ +P P R EFH +L L Sbjct: 238 MEVESDLSRARAIADYADTFSFGQDSLSEAWAKMRDPFLAPLEKWQARLEFHSKLALPLA 297 Query: 282 PVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILY 340 ++ + A+ + + + + LS+ + ++G ++ + P + Sbjct: 298 NLV------LVLLAVAMALKYGRSTGLALGLSVVLALGYYGVFFLGRSLAGIGALPPEVG 351 Query: 341 LFLFCISSIFLLMIKKK 357 + + + L + + Sbjct: 352 AWGANLLFLLLGIRALR 368 >gi|213421645|ref|ZP_03354711.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 128 Score = 48.8 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 17/128 (13%), Positives = 34/128 (26%), Gaps = 1/128 (0%) Query: 229 QTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 + L + ++S L N + Y+ ++ Q L + L+ Sbjct: 1 NLTPDKLGVVALDPDALSISGLHN-YVKYLKSSGQDAGRYQFNMWSKIFQPLSVAVMMLM 59 Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 ++ IS F V + + P + L Sbjct: 60 ALSFIFGPLRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIVGALLPSASFFLI 119 Query: 349 IFLLMIKK 356 LM++K Sbjct: 120 SLWLMLRK 127 >gi|15893122|ref|NP_360836.1| hypothetical protein RC1199 [Rickettsia conorii str. Malish 7] gi|238650591|ref|YP_002916443.1| hypothetical protein RPR_03025 [Rickettsia peacockii str. Rustic] gi|15620329|gb|AAL03737.1| unknown [Rickettsia conorii str. Malish 7] gi|238624689|gb|ACR47395.1| hypothetical protein RPR_03025 [Rickettsia peacockii str. Rustic] Length = 362 Score = 48.5 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 35/361 (9%), Positives = 103/361 (28%), Gaps = 8/361 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K+ Y+ + + F + ++ + + + + + + ++ Y IP + Sbjct: 4 LKTLSWYLTKLYSKCFFIILFLLIGLLIISNVFDLLQKFKNIYVPFSFFWRLILYKIPYL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V+ L ++ +N EL + ++G ++ + ++L I N Sbjct: 64 LGQVSSLISFTAMLFFLRNLTKNNELTAMLSSGIHIWQVLVIPCIVTLMLGIVFTTILNP 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS----KYNPNNTLQGIFIV 176 I + L AK + + L + ++ + I Sbjct: 124 IGTIGLQKYELLEAKLTKKALSEGIISKSGLLFFESLNDETQIIQTQFINVAEKKLNNIT 183 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + ++ + +K + + + + Sbjct: 184 ILFVDHNNSFLKRIDALYGIIENKMLHLNRVKVFTKEETKAYNNL---TMQTNLSINSLV 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 ++ ++ L N Y+ ++K+L + + + +++ + Sbjct: 241 NKFIRPEMVSIWAL-PKLINELLNSGLPAINYQIYYYKQLFKPIMMMATVILASCFISLK 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 ++KI + + I IL + +M+ Sbjct: 300 QRDNSQEKILLLGLFSGFIAYSLSEILLKILTYNNLSLIAAILLPSMLIFFISNFIMLHY 359 Query: 357 K 357 K Sbjct: 360 K 360 >gi|57237364|ref|YP_178377.1| hypothetical protein CJE0358 [Campylobacter jejuni RM1221] gi|57166168|gb|AAW34947.1| membrane protein, putative [Campylobacter jejuni RM1221] Length = 352 Score = 48.5 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 40/361 (11%), Positives = 93/361 (25%), Gaps = 13/361 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F +I ++F + ++ I +L + + N+ L +L + Sbjct: 1 MWIFFRFISGIYLKNFFIIFFSLLGFYCGIDLLLNFKDLPK---AANLDLLYVMFLSFSA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P V P L SM R E + + G SR +I A+ Sbjct: 58 VPYVLPISLIFALVVSLISMIRANEFVSLYALGLSRNYVILFPFLWALFFCCIYIGLNFT 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + + + ++ L + N I Sbjct: 118 SFAYANDYKR------NILKNGTIMNQSGEVFLKFNNNFVYISKINNGQNSAQNIKIFNI 171 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI----SKDISIMKFKSYTLQTESANSS 236 + + + + + ++ IL DG + + + I F Sbjct: 172 NDLNLSSFVSAKNAYFEGESWILRDGNITLLPKNYELANDGLKIQDFSELKSLEGFKPKI 231 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + +N + + + + +K + F LI Sbjct: 232 IEGVASNSDYSISDALESFELFKAQNVNTDALKINLYKFVFTPFFAPFLMLIMYYFFPVI 291 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 A + + +++ + + I I+ + + K Sbjct: 292 ARFFNLAIVTFMAFVVTLMIWGVLFLLTRLSENSVIASEIGIVVPIIILGCLSAYMYYKH 351 Query: 357 K 357 + Sbjct: 352 R 352 >gi|225010828|ref|ZP_03701296.1| permease YjgP/YjgQ family protein [Flavobacteria bacterium MS024-3C] gi|225005036|gb|EEG42990.1| permease YjgP/YjgQ family protein [Flavobacteria bacterium MS024-3C] Length = 462 Score = 48.5 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 77/233 (33%), Gaps = 15/233 (6%) Query: 24 VFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRN 83 +FI I I+ ++ L I+ K YL+P + V P + + + + Sbjct: 1 MFIFIFQSIWLYIDNLAGKGLDLVIIGKFIFYLLPNLTEKVLPLTVLLSSILTFGTFAEH 60 Query: 84 TELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFS 143 E + +G S ++ ++ L +L + F + I P L Sbjct: 61 YEFAAMKASGISLQRSMRTLIVLVSVLGLVTFYFADRIIPAAELKSYSLKKNIAKVKPAV 120 Query: 144 YLEENLFF-RLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI---YYAQSGSIDLDRQ 199 + E LF + I + + N + + T A+ G + Sbjct: 121 AIAEGLFSEFEGTGMTILVQEKYGENDRYLRDVTIHKKTDNQINTTVIKAKEGELLSSEN 180 Query: 200 AI----ILNDGEVHR-------KSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + +L DG + K+ ++ F++YT+ + + + + Sbjct: 181 SNLIKLVLKDGHYYESLSVTTSKNHQKHPYAVSNFETYTINIDLTELNMVDMD 233 Score = 46.1 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 10/107 (9%), Positives = 38/107 (35%), Gaps = 4/107 (3%) Query: 251 LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFI 310 + R ++ + HK+ L ++ + A A++R+ P+ I Sbjct: 333 IQTKRKELLIRYKIYNMHALSLHKKYALALSCIVLFFVG---APLGAIIRKGGLGLPMVI 389 Query: 311 SLSISFGVFWGFSYIIHKIEQNPYYIPI-LYLFLFCISSIFLLMIKK 356 ++ + ++ + + ++ ++ + + + + K+ Sbjct: 390 AIVLFLTYYFLGVFTYNYAKEGNISPFFGAWIPTLVMLPLGIFLTKR 436 >gi|57168449|ref|ZP_00367583.1| probable integral membrane protein Cj0313 [Campylobacter coli RM2228] gi|57020257|gb|EAL56931.1| probable integral membrane protein Cj0313 [Campylobacter coli RM2228] Length = 352 Score = 48.5 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 42/361 (11%), Positives = 99/361 (27%), Gaps = 14/361 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F +I ++F + L ++ I +L N + + N+ L +L + Sbjct: 1 MWIFFRFISGIYLKNFFIIFLSLLGFYCGIDLLLNFNDLPD---AANLSLLYVIFLAFSA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P L SM R E + + G S+ +I A+ Sbjct: 58 VTYVLPVSLIFALVLSLVSMIRANEFVSLYALGLSKNLVIIFPFLWALFFCFVYVGLNFT 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + + + N I Sbjct: 118 PFAYANDYKRNILKNGTMLKQSGEVFLKFNNEFIYI------SKVNNGQSTAQNIKIFNI 171 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGE----VHRKSPISKDISIMKFKSYTLQTESANSS 236 + + ++ S +++ IL +G +K ++I +FK Sbjct: 172 KDLNLSSFIEAKSGIFEKKNWILKEGNLTLLPKEYELGNKGLNISEFKELNTLEGFKPKI 231 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK- 295 + ++ + + + +E+ + +K + F LI Sbjct: 232 IEGVASDSDYSILDILESLELFKTQNISIESLKISLYKLVFMPFFAPFLMLIMYYFFPVI 291 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 F+ +++G+ + S + ++ + L F+ Sbjct: 292 ARFFNLAFVAFVAFVVTLLTWGMLFLLSRLSENGVILSELGIVMPIVLLIFLGGFMFYKH 351 Query: 356 K 356 + Sbjct: 352 R 352 >gi|34581207|ref|ZP_00142687.1| hypothetical protein [Rickettsia sibirica 246] gi|28262592|gb|EAA26096.1| unknown [Rickettsia sibirica 246] Length = 362 Score = 48.5 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 36/361 (9%), Positives = 103/361 (28%), Gaps = 8/361 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K+ Y+ + + F + ++ + + + + + + ++ Y IP + Sbjct: 4 LKTLSWYLTKLYSKCFFIILFLLIGLLIISNVFDLLQKFKNIYVPFSFFWRLILYKIPYL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V+ L ++ +N EL + ++G ++ + ++L I N Sbjct: 64 LGQVSSLISFTAMLFFLRNLTKNNELTAMLSSGIHIWQVLVIPCIVTLMLGIVFTTILNP 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS----KYNPNNTLQGIFIV 176 I + L AK + + L K ++ + I Sbjct: 124 IGTIGLQKYELLEAKLTKKALSEGIISKSGLLFFESLNDKTQIIQTQFINVAEKKLNNIT 183 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + ++ + +K + + + + Sbjct: 184 ILFVDHNNSFLKRIDALYGIIENKMLHLNRVKVFTKEETKAYNNL---TMQTNLSINSLV 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 ++ ++ L N Y+ ++K+L + + + +++ + Sbjct: 241 NKFIRPEMVSIWAL-PKLINELLNSGLPAINYQIYYYKQLFKPIMMMATVILASCFISLK 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 ++KI + + I IL + +M+ Sbjct: 300 QRDNSQEKILLLGLFSGFIAYSLSEILLKILTYNNLSLIAAILLPSMLIFFISNFIMLHY 359 Query: 357 K 357 K Sbjct: 360 K 360 >gi|207092118|ref|ZP_03239905.1| hypothetical protein HpylHP_03688 [Helicobacter pylori HPKX_438_AG0C1] Length = 272 Score = 48.5 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 40/266 (15%), Positives = 93/266 (34%), Gaps = 2/266 (0%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y+ + + F L + FI+ ++ ++ ++ S L+++ Y +P + + P Sbjct: 5 YLFMAVSQVFFSFFLVLFFISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFILP 64 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 F L+ ++ + ELL+ + G S + K + L++L+S L + I+ P + Sbjct: 65 ITFFAACALGLSRLSYDHELLVFFSLGVSPKKMTKAFVPLSLLVSAILLVFSLILIPTSK 124 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 S + + + + +L D L NN+ + + ++ Sbjct: 125 SAYYGFLRQKKDKIDINIRAGEFGQKLGDWLVYV--DKAENNSYDNLVLFSNKSLSQESF 182 Query: 187 YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 AQ G+I+ LN + H + + F+ L+ + + ++ Sbjct: 183 ILAQKGNINNQNGVFELNLYKGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYLQGT 242 Query: 247 LSFLLNPNPNNPNYRPELLETYRSEF 272 N + Sbjct: 243 DYLGYWKKAFGKNANKNQKRRFSQAI 268 >gi|8925955|gb|AAF81687.1|AF233069_10 unknown [Galdieria sulphuraria] Length = 142 Score = 48.1 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 49/138 (35%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 + YIL+ + F++S I + +L + I KI Y P + Sbjct: 3 TIIDRYILQLLIGPFVISSSAFTSITLSVGVLFELVRRVVEGLPFKIAGKILLYKSPYFI 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + P T + N EL+ + G S ++ + L++I F ++I Sbjct: 63 FLSFPLASLFATLITFNQLANNKELIGFRSLGISNYKWLRSTIIFGTLIAISSFFINDLI 122 Query: 122 EPKCRSTIKQLSAKAQLA 139 P +L +++ Sbjct: 123 VPVSNHRANELLRESKEN 140 >gi|86142618|ref|ZP_01061057.1| hypothetical protein MED217_06881 [Leeuwenhoekiella blandensis MED217] gi|85830650|gb|EAQ49108.1| hypothetical protein MED217_06881 [Leeuwenhoekiella blandensis MED217] Length = 514 Score = 48.1 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 12/108 (11%), Positives = 36/108 (33%), Gaps = 6/108 (5%) Query: 251 LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFI 310 + + + + L Y H++ +I + A A++R+ PI I Sbjct: 327 IKNRKTDNGIKVKTLSKYEIALHEKFVLAFGCIILFFVG---APLGAIIRKGGLGLPIVI 383 Query: 311 SLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--FCISSIFLLMIKK 356 + + + + + ++ L +L + + + + + Sbjct: 384 GVVLFLTYHFIGIFAKNSA-EDGSVAAWLASWLSTLILFPLGVYLTYR 430 >gi|157829030|ref|YP_001495272.1| hypothetical protein A1G_06555 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933754|ref|YP_001650543.1| hypothetical protein RrIowa_1403 [Rickettsia rickettsii str. Iowa] gi|157801511|gb|ABV76764.1| hypothetical protein A1G_06555 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908841|gb|ABY73137.1| hypothetical membrane spanning protein [Rickettsia rickettsii str. Iowa] Length = 362 Score = 48.1 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 41/360 (11%), Positives = 106/360 (29%), Gaps = 6/360 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K+ Y+ + + F + ++ + + + + + + L++ Y IP + Sbjct: 4 LKTLSWYLTKLYSKCFFIILFLLIGLLIISNVFDLLQKFKNIYVPFSFFLRLILYKIPYL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V+ L ++ +N EL + ++G ++ + ++L I N Sbjct: 64 LGQVSSLISFTAMLFFLRNLTKNNELTAMLSSGIHIWQVLVIPCIVTLMLGIVFTTILNP 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL---YIKISKYNPNNTLQGIFIVD 177 I + L AK + + L I N + + + Sbjct: 124 ISTIGLQKYELLEAKLTKKALSEGIISKSGLLFFESLNDETQIIQTQFINVAEKKLNNIT 183 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + + ++ + +L+ V + L S + Sbjct: 184 ILFVDHNNSFLKRIDALYGIIENKMLHLSRVKVFTKEETKAYNNLTMQTNLSINSLVNKF 243 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 I + + L N Y+ ++K+L + + + +++ + Sbjct: 244 IRP---EMVSIWALPKLINELLNSGLPAINYQIYYYKQLFKPIMMMATVILASCFISLKQ 300 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 ++KI + + I IL + +M+ K Sbjct: 301 RDNSQEKILLLGLFSGFIAYSLSEILLKILTYNNLSLIAAILLPSMLIFFISNFIMLHYK 360 >gi|46199050|ref|YP_004717.1| hypothetical protein TTC0744 [Thermus thermophilus HB27] gi|55981077|ref|YP_144374.1| hypothetical protein TTHA1108 [Thermus thermophilus HB8] gi|46196674|gb|AAS81090.1| hypothetical conserved membrane spanning protein [Thermus thermophilus HB27] gi|55772490|dbj|BAD70931.1| conserved hypothetical protein [Thermus thermophilus HB8] Length = 368 Score = 48.1 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 41/362 (11%), Positives = 103/362 (28%), Gaps = 32/362 (8%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+LR L++ LF+ + + L +L+ Y +P + Sbjct: 2 ILHRYLLRESLPVLLLALLFLTAVYLFGFFYAGARWL--EGVPLPKILRWLSYHVPGIWV 59 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 V P T V + + + G P++ + +LS + + Sbjct: 60 QVFPIALVTTTVLVFGRLAAEGAHFALLSAGIPLGRAALPLVAVGAVLSGLALYLQEYVV 119 Query: 123 PKCRST-IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + + + + + + ++ + + Sbjct: 120 PEANNRVRVAWWDEIHTQGAGLFRLKGMQIPIGQGKSLYFQDFDMAAKEMVGVRITAFQG 179 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPIS------------------KDISIMKF 223 + +A+ G+ + + + L D ++ + +S K Sbjct: 180 EVGTFLFAERGTW--EDKTLTLKDYRYYQVDFAQVPGLETAPDLLAQVRRVFRVVSQGKT 237 Query: 224 KSYTLQTESANSSTIVLKAND--QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLF 281 T A + Q+ +P P R E H +L L Sbjct: 238 LEVTSDLSRARAIADYADTFSFGQDSLSEAWRKLKDPFLPPLEKWRARLELHSKLALPLA 297 Query: 282 PVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILY 340 ++ + A+ + K + + +S+ + ++G ++ + P L Sbjct: 298 NLV------LVLLAAAMALRYGKSPGLALGMSVVLALAYYGAFFLGRALAGIGALPPELG 351 Query: 341 LF 342 + Sbjct: 352 AW 353 >gi|323163036|gb|EFZ48869.1| hypothetical protein ECE128010_0632 [Escherichia coli E128010] Length = 150 Score = 48.1 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 41/138 (29%), Positives = 65/138 (47%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSSQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L M+ P + L M ++E+ I G S L K VL+LAI LSIF+ + Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY 120 Query: 121 IEPKCRSTIKQLSAKAQL 138 P + I QL ++Q Sbjct: 121 GRPWAYAQIYQLEQQSQS 138 >gi|229587132|ref|YP_002845633.1| Putative permease [Rickettsia africae ESF-5] gi|228022182|gb|ACP53890.1| Putative permease [Rickettsia africae ESF-5] Length = 362 Score = 48.1 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 34/361 (9%), Positives = 103/361 (28%), Gaps = 8/361 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K+ Y+ + + F + ++ + + + + + + ++ Y IP + Sbjct: 4 LKTLSWYLTKLYSKCFFIILFLLIGLLIISNVFDLLQKFKNIYVPFSFFWRLILYKIPYL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V+ L ++ +N EL + ++G ++ + ++L I N Sbjct: 64 LGQVSSLISFTAMLFFLRNLTKNNELTAMLSSGIHIWQVLVIPCIVTLMLGIVFTTILNP 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS----KYNPNNTLQGIFIV 176 I + L AK + + L + ++ + I Sbjct: 124 IGTIGLQKYELLEAKLTKKALSEGIISKSGLLFFESLNDETQIIQTQFINVAEKKLNNIT 183 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + ++ + +K + + + + Sbjct: 184 ILFVDHNNSFLKRIDALYGIIENKMLHLNRVKVFTKEETKAYNNL---TMQTNLSINSLV 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 ++ ++ L + Y+ ++K+L + + + +++ + Sbjct: 241 NKFIRPEMVSIWAL-PKLIHELLNSGLPAINYQIYYYKQLFKPIMMMATVILASCFISLK 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 ++KI + + I IL + +M+ Sbjct: 300 QRDNSQEKILLLGLFSGFIAYSLSEILLKILTYNNLSLIAAILLPSMLIFFISNFIMLHY 359 Query: 357 K 357 K Sbjct: 360 K 360 >gi|57242053|ref|ZP_00369993.1| probable integral membrane protein Cj0313 [Campylobacter upsaliensis RM3195] gi|57017245|gb|EAL54026.1| probable integral membrane protein Cj0313 [Campylobacter upsaliensis RM3195] Length = 350 Score = 48.1 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 37/354 (10%), Positives = 91/354 (25%), Gaps = 12/354 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F +I ++F + +V + +L + S N++L ++ + Sbjct: 1 MSIFFHFISFIYLKNFFILFFALVGFYCGVDLLLNFKDL---PASANLILLYVLFVGFSA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P +M RN E + + G S+ +I A+L Sbjct: 58 VTYILPISLIFALVLSFLTMIRNNEFVSLYALGLSKNRVIIYPFLWALLFCFIYIGLNFT 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + L L + K + + I +D Sbjct: 118 SFAYANEYKRSILKNGVLNKKS------SDIFLKFNEEFVYVKSLDEGLAKELKIFSLKD 171 Query: 181 TQTHKIYYAQSGSIDLDRQAIILND--GEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + A+ + + + + F + Sbjct: 172 GNLSHLIQAKRALFNENSWLLEEGNITYIPKEFVLGENGYKSENFANLETLEGFKPKLAK 231 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLIS-IVAADKRA 297 + + + + + + + + +K + F LI Sbjct: 232 SVASGKEYSIYDAYQSLILFDSQGLNTRNVKIALYKLIFAPFFAPFLMLIMYYYFPVIAR 291 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL 351 F+ + +G + F + + + IL L ++F+ Sbjct: 292 FFNLAFVAFVAFVVTLVVWGGLFVFLRLSENGVISGEFGIILPNLLLAFFALFI 345 >gi|305432868|ref|ZP_07402026.1| integral membrane protein [Campylobacter coli JV20] gi|304444022|gb|EFM36677.1| integral membrane protein [Campylobacter coli JV20] Length = 352 Score = 47.7 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 41/361 (11%), Positives = 98/361 (27%), Gaps = 14/361 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F +I ++F + L ++ I +L N + + N+ L +L + Sbjct: 1 MWIFFRFISGIYLKNFFIIFLSLLGFYCGIDLLLNFNDLPD---AANLSLLYVIFLAFSA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + V P L SM R E + + G S+ +I A+ Sbjct: 58 VTYVLPVSLIFALVLSLVSMIRANEFVSLYALGLSKNLVIIFPFLWALFFCFVYVGLNFT 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + + + N I Sbjct: 118 PFAYANDYKRNILKNGTMLKQSGEVFLKFNNEFIYI------SKVNNGQSTAQNIKIFNI 171 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGE----VHRKSPISKDISIMKFKSYTLQTESANSS 236 + + ++ S +++ IL +G +K ++I +FK Sbjct: 172 KDLNLSSFIEAKSGIFEKKNWILKEGNLTLLPKEYELGNKGLNISEFKELNTLEGFKPKI 231 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK- 295 + ++ + + + +E+ + +K + F LI Sbjct: 232 IEGVASDSDYSILDILESLELFKTQNISIESLKISLYKLVFMPFFAPFLMLIMYYFFPVI 291 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 F+ +++ + + S + ++ + L F+ Sbjct: 292 ARFFNLAFVAFVAFVVTLLTWSMLFLLSRLSENGVILSELGIVMPIVLLIFLGGFMFYKH 351 Query: 356 K 356 + Sbjct: 352 R 352 >gi|157738400|ref|YP_001491084.1| hypothetical protein Abu_2200 [Arcobacter butzleri RM4018] gi|157700254|gb|ABV68414.1| conserved hypothetical membrane protein [Arcobacter butzleri RM4018] Length = 338 Score = 47.7 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 56/356 (15%), Positives = 121/356 (33%), Gaps = 19/356 (5%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y+ + +F + FI VI +++ L + T + L +I Y IP ++ Sbjct: 2 KLQRYLYSQLAITFFPIFFGLFFITAVIFLVKISALTAIITVNFFELFRIFSYTIPDIIF 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P F + L+ ++ EL +I + G + ++K L L +LL++ L + + Sbjct: 62 YTMPISFFISMVITLSKLSSEYELTVITSFGLNPFKILKIFLPLTLLLTLLLLVVSVGLI 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 PK KQ + F+ + D L K N + Sbjct: 122 PKSDFERKQFVNIKKNEANFNIKSGEFGQKFGDWLIFINDKKNNLYEDVKLL---KVQKD 178 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + +++ +D D + + E ++ + + +++ + + + T V Sbjct: 179 NDQFVISKNAVLDNDNGVLSIRLDEGKAFLIDKEEFNQINYEAMYINDSISTAKTTVFTT 238 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + + + LT ++ F L+S+ R Sbjct: 239 TYDYWKNNIKNKVDLDD----------------LTFFILTSFFPLMSLFLVITFGYFNPR 282 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + + + IS +++ I I L+L ++ IKK+Y Sbjct: 283 YEKNRAIMYSLISIVLYYVLIKSIGDKIFLHTLYIIPILWLSGTYLLYSKTIKKEY 338 >gi|157964920|ref|YP_001499744.1| putative permease [Rickettsia massiliae MTU5] gi|157844696|gb|ABV85197.1| Putative permease [Rickettsia massiliae MTU5] Length = 370 Score = 47.7 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 36/361 (9%), Positives = 105/361 (29%), Gaps = 8/361 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K+ Y+ + + F + ++ + + I + + + ++ Y IP + Sbjct: 12 LKTLSWYLTKLYFKCFFIILFLLIGLLIISNIFDLLQKFKNIYVPFSFFWRLILYKIPYL 71 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V+ L ++ +N EL + ++G ++ + ++L I N Sbjct: 72 LGQVSSLISFSAMLFFLRNLTKNNELTAMLSSGIHIWQVLVIPCIVTLMLGIVFTTILNP 131 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS----KYNPNNTLQGIFIV 176 I + L AK + + L + ++ + I Sbjct: 132 IGTIGLQKYELLEAKLTKKALSEGIISKSGLLFFEALNDENQIIQTQFINVAEKKLNNIT 191 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + ++ + +K + + ++ + Sbjct: 192 ILFVDHNNSFLKRIDALYGIIENKMLHLNRVKVFTKEETKAYNNLTIQT---NLSINSLV 248 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 ++ ++ L N + Y+ ++K+L + + + +++ + Sbjct: 249 NKFIRPEMVSIWVL-PKLINELLNSGLPVINYQIYYYKQLFKPIMMMATVILASCFISLK 307 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 ++KI + + I IL + +M+ Sbjct: 308 QRDNSQEKILLLGLFSGFIAYSLSEILLKILTYNNLSLIAAILLPSMLIFFISNFIMLHY 367 Query: 357 K 357 K Sbjct: 368 K 368 >gi|153827726|ref|ZP_01980393.1| membrane protein, putative [Vibrio cholerae MZO-2] gi|149737797|gb|EDM52702.1| membrane protein, putative [Vibrio cholerae MZO-2] Length = 144 Score = 47.3 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 17/126 (13%), Positives = 37/126 (29%), Gaps = 14/126 (11%) Query: 219 SIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQ 278 I SY + LLN ++E R++ Sbjct: 1 MITNLDSYDGLIGQREVKSAERDWEALPTLSLLN----------NADRRAQAELQWRISL 50 Query: 279 WLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 V L++++ A+ ++ + + ++ I F S I ++ I Sbjct: 51 ---VVCIPLLTMLVVPLSAVNPRQGRFAKMGPAILIYLTYFLALSATKSAI-EDGSLPVI 106 Query: 339 LYLFLF 344 + L+ Sbjct: 107 IGLWPI 112 >gi|254455252|ref|ZP_05068681.1| conserved hypothetical protein [Candidatus Pelagibacter sp. HTCC7211] gi|207082254|gb|EDZ59680.1| conserved hypothetical protein [Candidatus Pelagibacter sp. HTCC7211] Length = 325 Score = 46.9 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 42/325 (12%), Positives = 100/325 (30%), Gaps = 9/325 (2%) Query: 35 RINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNT-- 92 + S + +S P+++ + PF F + T + N E+ I + Sbjct: 3 ELEFFKEIEVSSGFPIFLSLLNSPSMIFEMLPFIFLITTQLFFIKLFNNNEIEIFKYSGL 62 Query: 93 -GTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFF 151 TS + + ++ + ++ +F + + + K L Sbjct: 63 KNTSILKIFSLIVISSGIILTIIFYNFSAVFKNFYLEEKTKFTSDSKYLAVITKNGLWIK 122 Query: 152 RLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRK 211 D+ ++ + + D I +S I++ + +V+ Sbjct: 123 DEIDEKIYIVNSSKIESNFLINNFITEFDKDYKVIRNLKSDKINIQSTDWQAFNVKVY-- 180 Query: 212 SPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSE 271 + I K + + T+ + + L N L + Sbjct: 181 --DKNNYEIKKQLNIKTNFDYKRIQTLYSNLSSLSFYQLFELRKNYKKLN-YSLIEINLQ 237 Query: 272 FHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ 331 F K L+ L+ + + S + + + + + S+ F ++ E+ Sbjct: 238 FLKILSFPLYLFLVAIFSSLIMFRVKRLHNTTFKISLGLFFSVIIYYINNFFMVMGNTER 297 Query: 332 NPYYIPILYLFLFCISSIFLLMIKK 356 I +++ L +S I LM+ K Sbjct: 298 -ISLIFAIFIPLILLSIINSLMLNK 321 >gi|56698095|ref|YP_168466.1| hypothetical protein SPO3263 [Ruegeria pomeroyi DSS-3] gi|56679832|gb|AAV96498.1| hypothetical protein SPO3263 [Ruegeria pomeroyi DSS-3] Length = 150 Score = 46.9 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 11/92 (11%), Positives = 25/92 (27%), Gaps = 1/92 (1%) Query: 264 LLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFS 323 E +RL+ V LI R + + + + S Sbjct: 43 SRGEISEELQERLSWIGVSVAVTLIGFSTLMLGTFSRFG-LWPQLIAAFAGLIALEGMRS 101 Query: 324 YIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + +P + + ++ +L +K Sbjct: 102 TATAFVGSHPGLWWVQHAPALGGIALSILFLK 133 >gi|260886192|ref|ZP_05897457.1| putative permease [Prevotella tannerae ATCC 51259] gi|260850440|gb|EEX70309.1| putative permease [Prevotella tannerae ATCC 51259] Length = 629 Score = 46.9 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 39/99 (39%), Gaps = 4/99 (4%) Query: 259 NYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGV 318 + + T+R ++H++ T + + F I A A++R+ P I++ + Sbjct: 333 EEGDKSVRTHRIQWHQKFTMSIACIFFFFIG---APLGAIIRKGGLGMPTIIAVILFIFY 389 Query: 319 FWGFSYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIKK 356 + + + + I +++ ++ + + K Sbjct: 390 YIINTSGMKMARDGAWNMIFGMWISTVVLTPLGCFLTYK 428 >gi|224418451|ref|ZP_03656457.1| hypothetical protein HcanM9_04150 [Helicobacter canadensis MIT 98-5491] gi|313141983|ref|ZP_07804176.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|313131014|gb|EFR48631.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] Length = 341 Score = 46.9 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 53/356 (14%), Positives = 117/356 (32%), Gaps = 16/356 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y+ + F + FIA V+ ++ + S LL + Y +P ++ Sbjct: 2 RIKNYLFHSFAQIFFPIFFVLFFIASVVIFIRIAGVTFVVQISFFELLSLYFYTLPLMIF 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 V P F + T L+ ++ + EL ++ G + +IK +A L+S LFI ++ Sbjct: 62 FVIPLSFFVACTLSLSRLSFDYELPVLFALGMNPSKIIKIFFPIAALVSFSLFILSLVLT 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + +Q + + ++ + +L D L IV + Sbjct: 122 PLSDTAYRQFLEERKNSININLQAGEFGQKLGDWLVYVQKSK---EDSSYENIVLLSFAK 178 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + ++ + I + + P + + F + +++ + L Sbjct: 179 EGGMIFSDNAKIVNQMGVMEAILEKGSIYRPKEDFVEKILFDTLIIRSSITAIDEVDLGV 238 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 + R L+ ++ F L+S+ + R Sbjct: 239 IGYWKRAFYENDRQKKTLRN-------------LSMYVMMSCFPLVSLFFFPLLGVKNPR 285 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + + + G+F+ Y+ ++L +F +IKK Y Sbjct: 286 YQKNYTILQAMGVIGIFYALMYLFASYLPLLGMFIFPIIWLLLGYLLFERVIKKYY 341 >gi|67459625|ref|YP_247249.1| permease [Rickettsia felis URRWXCal2] gi|67005158|gb|AAY62084.1| Predicted permeases [Rickettsia felis URRWXCal2] Length = 362 Score = 46.9 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 37/358 (10%), Positives = 105/358 (29%), Gaps = 9/358 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K+ Y+ + + F + ++ + + I + + + ++ Y IP + Sbjct: 4 LKTLSWYLTKLYSKCFFIILFLLIGLLIISNIFDLLQKFKNIYVPFSFFWRLILYKIPYL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V+ L ++ +N EL + ++G ++ + ++L I N Sbjct: 64 LGQVSSLISFTSMLFFLRNLTKNNELTAMLSSGIHIWQVLVIPCIVTLILGIVFTTILNP 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS----KYNPNNTLQGIFIV 176 I + L AK + + L + ++ + I Sbjct: 124 IGTIGLQKYELLEAKLTKKTLSEGIISKSGLLFFESLKDENQIIQTQFINIAEKKLNNIT 183 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + ++ + +K + + ++ + Sbjct: 184 ILFVDSNNSFLKRIDALYGIIENKMLHLNRVKVFTKEETKTYNNLTIQT---NLSINSLV 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 ++ ++ L N Y+ ++K+L + + + +++ + Sbjct: 241 NKFIRPEMVSIWAL-PKLINELLNSGLPAINYQIYYYKQLFKPIMMMATVILASCFISLK 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 ++KI + + + N I + L I I +I Sbjct: 300 QRDNSQEKILILGLFSGF-IAYSLSEILLKILTYNNLSLIAAILLPSMLIFFISNFII 356 >gi|213022333|ref|ZP_03336780.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 125 Score = 46.9 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 17/117 (14%), Positives = 47/117 (40%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ + ++ + +P + + Sbjct: 7 LDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGNYDALGAGMYTLLSVPKDIQI 66 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 P + L + + +EL+++ +G +R+ + V+ AI L + Sbjct: 67 FFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEW 123 >gi|237751254|ref|ZP_04581734.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879] gi|229372620|gb|EEO23011.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879] Length = 342 Score = 46.5 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 50/322 (15%), Positives = 107/322 (33%), Gaps = 13/322 (4%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + Y+LR IG F + FIA +I +L L + S+ L+++ Y IP Sbjct: 5 LLKKYVLRSIGEMFFPFFFVLFFIASIILLLNIAMLTNGVKLSMIDLMQLYLYGIPANTF 64 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 V F L+ ++ +E+L+ + G S +I+ +L L +L+S L + ++ Sbjct: 65 FVIALTFYSACILGLSKLSYESEMLVFFSLGVSPKDIIRILLPLCVLVSFVLCMFSFVMT 124 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + K + + + + ++ D L I + N + ++ + Sbjct: 125 PNSKQAYKDFISLKKNEINIDLKPGDFGQKIGDWLVY-IDSKDKNVFHGLVLYANTTEQI 183 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 A++G I+ + + L + + ++FK ++ + Sbjct: 184 KDNFIIAKTGKIENRQGILELVLYDGDAYFNDKDFLQKIEFKEMIVRNFLDGTQDSDYNV 243 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 S + LFP++ + + K + Sbjct: 244 FTYWASAFQGDYKQLKRFSQS------------FCTSLFPLVSIFLILFFGIKNPRFHKN 291 Query: 303 KKIHPIFISLSISFGVFWGFSY 324 + S S + S Sbjct: 292 YAYFYVLGSGSFYLLAMYVLSM 313 >gi|218296646|ref|ZP_03497364.1| permease YjgP/YjgQ family protein [Thermus aquaticus Y51MC23] gi|218242959|gb|EED09492.1| permease YjgP/YjgQ family protein [Thermus aquaticus Y51MC23] Length = 368 Score = 46.5 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 46/371 (12%), Positives = 107/371 (28%), Gaps = 32/371 (8%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 + ++L+ ++ LF+ I + + +L+ Y +P VL Sbjct: 2 TLYRHLLKESLPVLFLTLLFLTAIFLFGFFYAGARWL--EGVPIPKILRWLSYHVPGVLV 59 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P T V + + + G P+L+L LLS+ + + Sbjct: 60 QAFPIALVTTTVLVFGRLAAEGAQFALLSGGVPLWRAALPLLWLGALLSVAALYLQEYVV 119 Query: 123 PKCRST-IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 P+ + + + + + + + ++ + S Sbjct: 120 PEANNRVRVAWWDEIHTQGAGLFRLKGMQIPIGQGRSLYFEDFDMERKEMVGVRIVSFQG 179 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPIS------------------KDISIMKF 223 + +A+ G+ D + I L +R + +S + Sbjct: 180 EVGTFLFAERGTW--DDRLITLRGYRFYRVDFREVPGLEGARDLLAQVRRVFRAVSRGEV 237 Query: 224 KSYTLQTESANSSTIVLKAND--QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLF 281 A + QN +P P + R EFH +L L Sbjct: 238 LEVESDLSRARAIADYADTFSFGQNSLSQAWRKARDPFLPPLERDRARLEFHSKLALPLA 297 Query: 282 PVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGV-FWGFSYIIHKIEQNPYYIPILY 340 ++ + A+ + + + + LS+ + ++G ++ + P L Sbjct: 298 NLV------LVLLAAAMALRYGRSTGLALGLSVVLALGYYGAFFLGRALAGVGAIPPELG 351 Query: 341 LFLFCISSIFL 351 + + L Sbjct: 352 AWGANLLFFLL 362 >gi|157826222|ref|YP_001493942.1| hypothetical protein A1C_06005 [Rickettsia akari str. Hartford] gi|157800180|gb|ABV75434.1| hypothetical protein A1C_06005 [Rickettsia akari str. Hartford] Length = 362 Score = 46.5 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 38/358 (10%), Positives = 105/358 (29%), Gaps = 9/358 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K+ Y+ + + FL+ ++ + + I + + + ++ Y IP + Sbjct: 4 LKTLSWYLAKLYSKCFLVILFLLIVLLIISNIFDLLQKFKNIYVPFSFFWRLILYKIPYL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V L+++ +N EL + ++G ++ + ++L I N Sbjct: 64 LGQVCSLISFTAMLFFLSNLTKNNELTAMLSSGIHIWQVLVIPCIVTLILGIVFTTILNP 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS----KYNPNNTLQGIFIV 176 I + L AK + + L + ++ + I Sbjct: 124 IGTIGLQKYELLEAKLTKKALSEGIISKSGLLFFESLNGENQIIQTQFINVAEKKLNNIT 183 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + ++ +K + + ++ + Sbjct: 184 ILFVDSNNSFLKRIDALYGIIENKMLHLKRVKVCTKEETKAYNNLTIQT---NLSINSLV 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 ++ ++ L N Y+ ++K+L + + + +++ + Sbjct: 241 NKFIRPEMVSIWSL-PKLINELFNSGLPAINYQIYYYKQLFKPIMMMATVILASCFISLK 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 ++KI + + L + N + L I I +I Sbjct: 300 QRDNSQEKILILGLFLGF-IAYSLSEILLKILTYNNLSLTAAILLPSMLIFFISNFII 356 >gi|262363206|gb|ACY59927.1| membrane protein [Yersinia pestis D106004] Length = 225 Score = 46.5 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 31/215 (14%), Positives = 74/215 (34%), Gaps = 5/215 (2%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R +S + ++ I + ++++ + N++L + G +P + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFSQKLVRILGAAVDGEIPTNVVLSLLGLGVPEMAQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 ++ P + L + +E+ +++ G + +LI L LA+ S I+ + Sbjct: 62 LILPLSLFLGLLMTLGKLYTESEITVMNACGMGKKSLIMAALILALFTSGLAAINTIWLG 121 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 P + A+ + + L F +D +F+ R Sbjct: 122 PWSSKHQDVVLNDAKANPSLAALGGGQFKSSNDGNSALFIGNVAGKEFNRVFLAQLRPNG 181 Query: 183 THK-----IYYAQSGSIDLDRQAIILNDGEVHRKS 212 + + Q +ILN G + + Sbjct: 182 NQRPSVVVADSGHMSELPDGSQMVILNKGTRYEGT 216 >gi|150025640|ref|YP_001296466.1| hypothetical protein FP1590 [Flavobacterium psychrophilum JIP02/86] gi|149772181|emb|CAL43657.1| Protein of unknown function [Flavobacterium psychrophilum JIP02/86] Length = 484 Score = 46.1 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 11/113 (9%), Positives = 41/113 (36%), Gaps = 3/113 (2%) Query: 245 QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKK 304 + + N + +Y+ + + ++ +++ ++ I A A++R+ Sbjct: 339 MSAKQNFDINNFSLDYKKKDINSFWISIYEKFVIAFACILMFFIG---APLGAIIRKGGL 395 Query: 305 IHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 PI ++ I + ++ +++ + F + + + +K Sbjct: 396 GLPIVFAMLIFITFHFLNTFGKKVAQESGMAPFLGAWISFFLLVPLAIFLTRK 448 Score = 41.5 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 43/252 (17%), Positives = 87/252 (34%), Gaps = 14/252 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y+L+ SF + ++FI + + I+ ++ L ++LK + +P + Sbjct: 1 MKILDKYLLKTYLTSFFGVFIILIFIFILQTVWLFISELAGKDLDLILILKFLLFKMPGL 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V P + M N E + + G S +K + F LLSI F N Sbjct: 61 IPLVLPLSVLLSAIMTFGDMAENYEFAAMKSAGISFQRTMKGLTFFIFLLSIGAFFFANN 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P + E F + + K N + + Sbjct: 121 VIPYAEFKFNNFRKNIAQVKPAMAIAEGQFSTIGNINIKVNKKSGTNGEFLEGVTIHKKS 180 Query: 181 T---QTHKIYYAQSGSIDLDRQAIILN----DGEVHRK-------SPISKDISIMKFKSY 226 + ++SG + ++ +L DG + + + FK Y Sbjct: 181 DLGEGAKTVIKSKSGQLISSEESSLLQLVLIDGYYYEDITPKSYEDRQKMPFAKVNFKRY 240 Query: 227 TLQTESANSSTI 238 T+ + + + + Sbjct: 241 TINIDLSKLNKV 252 >gi|330975729|gb|EGH75795.1| permease YjgP/YjgQ [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 131 Score = 46.1 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 10/96 (10%), Positives = 31/96 (32%), Gaps = 5/96 (5%) Query: 262 PELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWG 321 +E R++ L I L++I + ++ + + ++ + Sbjct: 18 GNPAPRSVAELQWRISLPLSVFIVTLMAIPL---SRVNPRQGRYLKLLPAILLYMSYLAI 74 Query: 322 FSYIIHKI--EQNPYYIPILYLFLFCISSIFLLMIK 355 + + + P + + ++ +S LL Sbjct: 75 LISVRSSLEKGKLPLSLGMWWVHAIYLSIGLLLFYW 110 >gi|156102633|ref|XP_001617009.1| hypothetical protein [Plasmodium vivax SaI-1] gi|148805883|gb|EDL47282.1| hypothetical protein, conserved [Plasmodium vivax] Length = 713 Score = 46.1 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 23/241 (9%), Positives = 57/241 (23%), Gaps = 8/241 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y + L+ + + + + ++ +++L + G L + Sbjct: 481 MNKIYKYAIYSFFGELLVISIIVFSLFI-------LRIIIKDNNKFSVILTMYGILY-KI 532 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + +L+ I + L I + + +NI Sbjct: 533 FCYIFAHYVLVMGLYILSIYYNIYVNKDIYEHSFNFFCYHYVYNNLHIHFLMLFYAFQNI 592 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I + + E + + Y +P + + Sbjct: 593 IFTINDAFNCIRMMFIIFKHIMVRIYEKITCKNFITFYELKEDKSPLSLNCMNKFKKKCN 652 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ID+D + D + + T + N + Sbjct: 653 MNNKCCRDKTCVEIDIDEIHELEYDKSQLPFPSLHQKPYCKNLDIKTYEQSLLNMRNPIF 712 Query: 241 K 241 K Sbjct: 713 K 713 >gi|218659050|ref|ZP_03514980.1| putative permease protein [Rhizobium etli IE4771] Length = 272 Score = 46.1 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 35/246 (14%), Positives = 75/246 (30%), Gaps = 6/246 (2%) Query: 55 YLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFL 114 +P L PF VL +NR EL++ G S + P + ++ L + Sbjct: 1 MRLPLNLQQTIPFVALFVGMTVLIGLNRKYELVVTRAAGISVWQFMFPFVAGSLALGVLT 60 Query: 115 FISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF 174 + N + + + + + + + + G Sbjct: 61 TTALNPLAAWGQRQALLVESDWRGENAVLRKAPQIPWLRQISGRDDVIIGAQTVQENGTK 120 Query: 175 IVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 +VD+ + + D L DG + + + + ++Q + Sbjct: 121 LVDAVLIHFDS---SGRVIMRQDAATAKLEDGYWQLNGVVERKPGEIPLRKASVQLRTNL 177 Query: 235 SSTIVLK---ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIV 291 V + A + F L+ + ++F+ L+Q L V LI+ Sbjct: 178 KQDFVQERLTAPETIGFFDLSNRIAAAKSFGISTKALETQFNSLLSQPLLLVAMTLIAAT 237 Query: 292 AADKRA 297 + K + Sbjct: 238 VSLKFS 243 >gi|239946701|ref|ZP_04698454.1| permease, YjgP/YjgQ family [Rickettsia endosymbiont of Ixodes scapularis] gi|239920977|gb|EER21001.1| permease, YjgP/YjgQ family [Rickettsia endosymbiont of Ixodes scapularis] Length = 362 Score = 46.1 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 35/361 (9%), Positives = 103/361 (28%), Gaps = 8/361 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K+ Y+ + + F + ++ + + I + + + ++ Y IP + Sbjct: 4 LKTLSWYLTKLYSKCFFIILFLLIGLLIISNIFDLLQKFKNIYVPFSFFWRLILYKIPYL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V+ L ++ +N EL + ++G ++ + ++L I N Sbjct: 64 LGQVSSLISFTAMLFFLRNLTKNNELTAMLSSGIHIWQVLVIPCIVTLILGIVFMTILNP 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS----KYNPNNTLQGIFIV 176 I + L AK + + L + ++ + I Sbjct: 124 IGTIGLQKYELLEAKLTKKALSEGIISKSGLLFFESLNDENQIIQTQFINVAEKKLNNIT 183 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + ++ + +K + + + + Sbjct: 184 ILFVDSNNSFLKRIDALYGIIENKMLHLNRVKVFTKEETKAYNNL---TIQANLSINSLV 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 ++ ++ L N Y+ ++K+L + + + +++ + Sbjct: 241 NKFIRPEMVSIWAL-PKLINELLNSGLPAINYQIYYYKQLFKPIMMMATVILASCFISLK 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 ++KI + + I IL + +++ Sbjct: 300 QRDNSQEKILILGLFSGFIAYSLSEILLKILTYNNLSLITAILLPSMLIFFISNFIILHY 359 Query: 357 K 357 K Sbjct: 360 K 360 >gi|225011756|ref|ZP_03702194.1| permease YjgP/YjgQ family protein [Flavobacteria bacterium MS024-2A] gi|225004259|gb|EEG42231.1| permease YjgP/YjgQ family protein [Flavobacteria bacterium MS024-2A] Length = 463 Score = 46.1 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 34/246 (13%), Positives = 79/246 (32%), Gaps = 13/246 (5%) Query: 24 VFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRN 83 +FI + I+ ++ + I+ K Y P ++P+V P + + +++ N Sbjct: 1 MFIFIIQTFWLFIDELAGKGLDIIIISKFLLYYSPKLIPLVLPLSVLLASLMTYGTLSEN 60 Query: 84 TELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFS 143 E + +TG S + + +LL I F N + P L Sbjct: 61 YEFAAMKSTGISLQRALLALTIFHVLLGIGTFYFSNHVIPYGELKSYNLRRNLAKLEPTL 120 Query: 144 YLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQ------SGSIDLD 197 + E +F + + KY N+ I+ + + Sbjct: 121 AIREGIFNEIGEINIKVARKYGDNDRFLEDVIIHEYTPNSENNIVIKAERGEMKSETTDP 180 Query: 198 RQAIILNDGEVHR-------KSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFL 250 ++L +G + + + F+ Y + + + + + L+ + +F Sbjct: 181 NLKLVLYNGNRYEEVIPKKATDKERIPHAKVYFEEYEMNIDLSKFNNVDLEEENYKSTFR 240 Query: 251 LNPNPN 256 + Sbjct: 241 MQKIDQ 246 Score = 43.1 bits (99), Expect = 0.077, Method: Composition-based stats. Identities = 16/114 (14%), Positives = 42/114 (36%), Gaps = 6/114 (5%) Query: 245 QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKK 304 ++ LN N + + ++ ++ T + LI A++R+ Sbjct: 319 RSSIRNLNTKKNTFFAYQKTINLHKITLQEKYTLIFASLFLFLIGAAL---GAIIRKGGL 375 Query: 305 IHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL--FCISSIFLLMIKK 356 P+ +S+ I + + + E N P +L F ++ +++ ++ Sbjct: 376 GLPLVLSVLIFLTYHYIGLFGKNAAEDN-SISPFFATWLSTFILAPFAIILTRR 428 >gi|289678195|ref|ZP_06499085.1| permease YjgP/YjgQ [Pseudomonas syringae pv. syringae FF5] Length = 95 Score = 46.1 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 13/94 (13%), Positives = 35/94 (37%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+ R + + ++ + ++ + +S +L I G+ +P L Sbjct: 2 IVFRYLSREVLLTLSAVSAVLLVFIMSGRFIKYLAQAASGALDPGVLFLIMGFRLPGFLQ 61 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSR 96 ++ P + + +E+ ++ TG S+ Sbjct: 62 VILPLGLFLGILMAYGRLYLESEMTVLAATGMSQ 95 >gi|51473938|ref|YP_067695.1| hypothetical protein RT0756 [Rickettsia typhi str. Wilmington] gi|51460250|gb|AAU04213.1| conserved hypothetical protein [Rickettsia typhi str. Wilmington] Length = 362 Score = 45.8 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 38/361 (10%), Positives = 103/361 (28%), Gaps = 8/361 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K+ LY+ + + F + ++ + + I + + + + Y IP + Sbjct: 4 LKTLSLYLTKLYSKCFFIILFLLIVLLIISNIFDLLQKFKNIYVPFSFFWRFILYKIPYL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V+ L ++ ++ EL+ I ++G ++ + ++L I N Sbjct: 64 LTQVSSLISFTSMLFFLRNLTKSNELIAILSSGIHIWQVLIIPCIVTLILGIICTTLLNP 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS----KYNPNNTLQGIFIV 176 I L AK L + L ++ + I Sbjct: 124 ISTIGLQKYAILEAKLTKKALSGGLISESGLLFFESLNEHNQIIQTQFIDVAEQKLNNIT 183 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + + + +K + + ++ + Sbjct: 184 ILFIDNNNSFLKRIDALYGIIKNKKLYLNRVKVSMKDETKSYNNLTIQT---NLSINSLV 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 ++ ++ L N Y+ ++K+L + + + +++ + Sbjct: 241 NKFMRPEMVSIWAL-PKLINELLNSGLSAINYQIYYYKQLFKPIMMMATVILASCFISLK 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 ++KI + + I IL L +++ Sbjct: 300 QRCNAQEKILILGLFSGFIAYSLSEILLKILTYNNLSLIAAILLPSLLIFFISNFIILHY 359 Query: 357 K 357 K Sbjct: 360 K 360 >gi|313886927|ref|ZP_07820630.1| putative phage tail component, N-terminal domain protein [Porphyromonas asaccharolytica PR426713P-I] gi|332300780|ref|YP_004442701.1| permease YjgP/YjgQ family protein [Porphyromonas asaccharolytica DSM 20707] gi|312923624|gb|EFR34430.1| putative phage tail component, N-terminal domain protein [Porphyromonas asaccharolytica PR426713P-I] gi|332177843|gb|AEE13533.1| permease YjgP/YjgQ family protein [Porphyromonas asaccharolytica DSM 20707] Length = 678 Score = 45.8 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 35/187 (18%), Positives = 76/187 (40%), Gaps = 5/187 (2%) Query: 18 MSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVL 77 + + + Q ++ + + +LL++ Y VLP P + + Sbjct: 26 ICWFV----VLMQFLWQHVDDLVGKGMDVGVLLEVIFYAGLYVLPTAVPLGVLLASLMTF 81 Query: 78 TSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQ 137 ++ ELL + + G ++KP++ L +++ LF+ + K + Q+ A+ Sbjct: 82 GNLGERLELLAMKSAGVPLSKIMKPLVILVTCIALGLFVYLDRGVQKASVRVYQILFSAR 141 Query: 138 LALTFSYLEENLFFRLDDDLYIKISKYN-PNNTLQGIFIVDSRDTQTHKIYYAQSGSIDL 196 A + + +FF D I + + +TL + I D + T +I A +G + + Sbjct: 142 YARPELEIPKGIFFNGIDGYSIYVGDKDAATSTLYNVMIYDLSEQHTPRIILADTGRLLM 201 Query: 197 DRQAIIL 203 D + L Sbjct: 202 DESKLYL 208 Score = 45.4 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 36/89 (40%), Gaps = 6/89 (6%) Query: 270 SEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI 329 E H++ T + ++F + A A+VR+ P+ +++ + F +++ K+ Sbjct: 419 QEMHRKFTFPVACLLFFFVG---APLGAIVRKGGVGTPMVLAV-LIFIIYYVIDTFGLKM 474 Query: 330 EQNPYYIPI--LYLFLFCISSIFLLMIKK 356 + ++L I + + K Sbjct: 475 INSGQIPVWAGMWLSSAVILPLGAFLTYK 503 >gi|332885237|gb|EGK05488.1| hypothetical protein HMPREF9456_02689 [Dysgonomonas mossii DSM 22836] Length = 664 Score = 45.4 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 13/101 (12%), Positives = 37/101 (36%), Gaps = 4/101 (3%) Query: 257 NPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISF 316 + + ++ E+H++ +IF I A A++R+ P+ +S+ + Sbjct: 358 QKINMQKNIRMHKVEWHRKFVLSFACLIFFFIG---APLGAIIRKGGLGMPVVVSVLLFI 414 Query: 317 GVFWGFSYIIHKIEQNPY-YIPILYLFLFCISSIFLLMIKK 356 + + + ++L F + + + + K Sbjct: 415 VYYIIDNIGYKMARDGVWEVWQGMWLSSFALFPLGVFLTYK 455 Score = 37.3 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 27/203 (13%), Positives = 71/203 (34%), Gaps = 8/203 (3%) Query: 13 GRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAME 72 +F + I + + + + + +L ++ Y I ++P+ P + Sbjct: 1 MMTFGICLF----IVLMQFLWKFVEDLVGKGLDNVVLAELFMYAILNLIPLALPLSLLLA 56 Query: 73 TTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQL 132 + ++ ELL I G S + +KP++ +++ F +N P+ + ++ L Sbjct: 57 SLMAFGNLGERLELLAIKAAGVSLLKTMKPLIIFISCVAVGAFFFQNEAMPRIQVKLRSL 116 Query: 133 SAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYA--- 189 + + E F+ + + + K + + ++ + Sbjct: 117 MISIRQKSPELDIPEGSFYSGITNYSLYVKKKDKETRMLKDVMIYDTSEGFDNMSVFVCD 176 Query: 190 -QSGSIDLDRQAIILNDGEVHRK 211 SI ++ ++LN R Sbjct: 177 SALMSISSNKDFLLLNLYSGQRF 199 >gi|322378344|ref|ZP_08052801.1| Conserved hypothetical integral membrane protein [Helicobacter suis HS1] gi|321149230|gb|EFX43673.1| Conserved hypothetical integral membrane protein [Helicobacter suis HS1] Length = 348 Score = 45.4 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 45/333 (13%), Positives = 114/333 (34%), Gaps = 10/333 (3%) Query: 26 IAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTE 85 IA ++ ++ ++ S L ++ Y +P + + P F L ++ + E Sbjct: 26 IASMVMLISIASVTLVVKLSFLDLAQLYIYSLPGTIFFIIPITFFGACAIGLARLSYDHE 85 Query: 86 LLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYL 145 LL+ + G + ++K L L I +S+ L I I+ P +S + + + Sbjct: 86 LLVFFSLGIAPKQIVKAFLPLCIFVSLVLLIFSLILIPASKSAYYSFLRAKKDRVDVNIQ 145 Query: 146 EENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILND 205 +L D L K + +F ++ I + I L Sbjct: 146 AGEFGQKLGDWLVYVGHKKKDIFSNLVLFSHKGLAFESFMIAQSGQIKNQEGVFGIELRK 205 Query: 206 GEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELL 265 G+ + + + + + + +S+ +P+ + Sbjct: 206 GDAYFADKNQLRKVHFETLNLRNKLAFSAKKDAAYLHSHDYVSYWKKAFGPHPDKNQQ-- 263 Query: 266 ETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYI 325 +R TQ + +F L S+ + R + ++ + ++ G+++ ++ Sbjct: 264 --------RRFTQAILVSLFPLASLFLIPLFGIANPRFSKNLSYVYVLLAVGLYFLGMHV 315 Query: 326 IHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + I + +++ ++ +I + Y Sbjct: 316 ASQDAPISGTILLPIVWMLGAYGLYRRIIVRFY 348 >gi|257457657|ref|ZP_05622824.1| conserved hypothetical protein [Treponema vincentii ATCC 35580] gi|257445043|gb|EEV20119.1| conserved hypothetical protein [Treponema vincentii ATCC 35580] Length = 116 Score = 45.4 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 14/108 (12%), Positives = 38/108 (35%), Gaps = 2/108 (1%) Query: 253 PNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISL 312 + +L Y EFHK+ + F L++ + + Q + Sbjct: 11 KEKQTQDEDKRILNLYWMEFHKKFSIPFGAFFFVLLAFAISSAGKVHNQGAGFFLGLLIA 70 Query: 313 SISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + +F G + ++ N +++ + + ++++ KK + Sbjct: 71 VAYWALFMGGQTLCLRLNWNGT--SAMWVPNIMVFAASVVLLGKKLFR 116 >gi|257457658|ref|ZP_05622825.1| conserved hypothetical protein [Treponema vincentii ATCC 35580] gi|257445044|gb|EEV20120.1| conserved hypothetical protein [Treponema vincentii ATCC 35580] Length = 229 Score = 45.4 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 33/141 (23%), Positives = 60/141 (42%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K LYI++ + F + LF+ FI +V IL V S + + Y +P V+ Sbjct: 7 KLLFLYIVKEMLLYFFVCFLFLFFIFFVNNILLLAEDVLSKQAPFKDVALLMLYSLPAVI 66 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 PF + T + + E L ++ G S L+ PVL + +L+SI F + +++ Sbjct: 67 ANAAPFAALIGTLMGIGRFVSDLEFLSMNALGISPRFLMVPVLLVGLLVSIVSFFTNDVL 126 Query: 122 EPKCRSTIKQLSAKAQLALTF 142 P +++ + Sbjct: 127 LPASAVNFRRVYWDIATSTPA 147 >gi|207108562|ref|ZP_03242724.1| hypothetical protein HpylH_03299 [Helicobacter pylori HPKX_438_CA4C1] Length = 206 Score = 45.4 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 71/186 (38%), Gaps = 2/186 (1%) Query: 44 ESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPV 103 S L+++ Y +P + + P F L+ ++ + ELL+ + G S + K Sbjct: 4 VSFLDLVQLFLYSLPGTIFFILPITFFAACALGLSRLSYDHELLVFFSLGVSPKKMTKAF 63 Query: 104 LFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISK 163 + L++L+S L + I+ P +S + + + + +L D L Sbjct: 64 VPLSLLVSAILLVFSLILIPTSKSAYYGFLRQKKDKIDINIRAGEFGQKLGDWLVYV--D 121 Query: 164 YNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKF 223 NN+ + + ++ AQ G+I+ LN + H + + F Sbjct: 122 KAENNSYDNLVLFSNKSLSQESFILAQKGNINNQNGVFELNLYKGHAYFTQGDKMRKVDF 181 Query: 224 KSYTLQ 229 + L+ Sbjct: 182 EELHLR 187 >gi|146299866|ref|YP_001194457.1| permease YjgP/YjgQ family protein [Flavobacterium johnsoniae UW101] gi|146154284|gb|ABQ05138.1| permease YjgP/YjgQ family protein [Flavobacterium johnsoniae UW101] Length = 486 Score = 45.4 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 13/108 (12%), Positives = 40/108 (37%), Gaps = 6/108 (5%) Query: 251 LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFI 310 + + + + + + +++ + I A A++R+ PI Sbjct: 348 IETTQKDLKDKQREINKHLTALYEKFVIAFACFLMFFIG---APLGAIIRKGGLGLPIVF 404 Query: 311 SLSISFGVFWGFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMIKK 356 ++ + F F + ++ Q P + ++ F +S + +L+ + Sbjct: 405 AV-LIFITFHFINTFGKRLSQEGGMSPFMGSWMSSFILSPLAILLTYR 451 Score = 43.8 bits (101), Expect = 0.046, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 75/207 (36%), Gaps = 3/207 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK + Y+L+ +F + + FI + + I+ ++ L +++K + +P + Sbjct: 1 MKILDKYLLKTFLFTFTTVFVILFFIFILQTVWLFISELAGKDLDLLLVVKFLLFSMPRI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 +P+V P + + ++ N E + ++G S ++ ++ +LSI F N Sbjct: 61 IPLVLPLSVLLASIMTFGNLAENYEFAAMKSSGISLQRAMRVLIIFIFVLSIVAFWFANN 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + P A + E F + K N + + + Sbjct: 121 VIPYAEYKFVNFRKNIAQAKPAMAIAEGQFNDVGTYNIKVNKKSGENGNILTGVTIHEKA 180 Query: 181 TQ---THKIYYAQSGSIDLDRQAIILN 204 + A+ G + ++ IL Sbjct: 181 NNIGENKTVIKAKDGELISSEKSSILK 207 >gi|15604603|ref|NP_221121.1| hypothetical protein RP769 [Rickettsia prowazekii str. Madrid E] gi|3861298|emb|CAA15197.1| unknown [Rickettsia prowazekii] gi|292572419|gb|ADE30334.1| Putative permease [Rickettsia prowazekii Rp22] Length = 362 Score = 45.4 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 41/358 (11%), Positives = 101/358 (28%), Gaps = 9/358 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 +K+ LY+ + + F + ++ + + I + + + + Y IP + Sbjct: 4 LKTLSLYLTKLYSKCFFIILFLLIGLLIISNIFDLLQKFKNIYVPFSFFWRFILYKIPYL 63 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L V+ L ++ ++ EL I ++G ++ + ++L I N Sbjct: 64 LSQVSSLISFTSMLFFLRNLTKSNELTAILSSGIHIWQVLIIPCIVTLILGIICTTILNP 123 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKIS----KYNPNNTLQGIFIV 176 I L AK L + L K+ + I Sbjct: 124 ISTIGLQKYSLLEAKLTKKALSECLISESGLLFFESLNEHNQIIQTKFIDVAEKKLNNIT 183 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + + + + K S + ++ + Sbjct: 184 ILFIDNNNSFLKRIDALYGIIDNKKLYLNRVKVSTKDEIKSYSNLTIQT---NLSINSLV 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 ++ ++ L N Y+ ++K+L + + + +++ + Sbjct: 241 NKFMRPEMVSIWAL-PKLINELLNSGLSAINYQIYYYKQLFKPIMMMATVILASCFISLK 299 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 ++KI + + + N I + L I I +I Sbjct: 300 QRCNSQEKILILGLFSGF-IAYSLSEILLKILTYNNLSLIAAILLPSMLIFFISNFII 356 >gi|221059884|ref|XP_002260587.1| cysteine repeat modular protein [Plasmodium knowlesi strain H] gi|193810661|emb|CAQ42559.1| cysteine repeat modular protein, putative [Plasmodium knowlesi strain H] Length = 3417 Score = 45.4 bits (105), Expect = 0.016, Method: Composition-based stats. Identities = 31/290 (10%), Positives = 73/290 (25%), Gaps = 24/290 (8%) Query: 1 MKSFELYILRCIGRSFLMSC---------LFIVFI-----AWVIQILQRINLVSSSTESL 46 M I + FL+ + I ++I L I +V S+ SL Sbjct: 2296 MNLLARKIFFYMIVFFLIYLNYFCYVKRNFVFMGILKIWYFFIICFLPYIYIVESNHNSL 2355 Query: 47 NILLKISGYLIPTVLPMVTPFCFAMET--TNVLTSMNRNTELLIIDNTGTSRITLIKPVL 104 + L + P F + N + N + + I + Sbjct: 2356 SNHLFYF------HFFITLPMRFLTQYLKMNCFMNSYSNQQYIHIWYIQRYIKIAEPMID 2409 Query: 105 FLAILLSIFLFISENIIEPKCRSTIKQL--SAKAQLALTFSYLEENLFFRLDDDLYIKIS 162 + + + + + + S + + Y + F I Sbjct: 2410 CVVLTAIFLTIYLVYTWLKRKKISTVERVISKQINKVHSKGYYQHRSDFYYHYYQKHVID 2469 Query: 163 KYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMK 222 N + ++ + + + + ++ + ++ K + Sbjct: 2470 TINNKKGREIFWLRKWENASFEREHSSGEEGGKEQQKENTKQGKKKQERNKNGKITKTPQ 2529 Query: 223 FKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEF 272 S T S + + + + + E L + EF Sbjct: 2530 RSSSTFNGNSTQCGSSAHISTSDDSFGIRRMEKKEVSSSNENLHNFNEEF 2579 >gi|297519577|ref|ZP_06937963.1| hypothetical protein EcolOP_18177 [Escherichia coli OP50] Length = 115 Score = 45.0 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 17/108 (15%), Positives = 47/108 (43%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI + I + +M+ +V ++ +I+ + ++ + + +P + + Sbjct: 7 LDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQI 66 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLS 111 P + L + + +EL+++ +G +R+ + V+ AI L Sbjct: 67 FFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLV 114 >gi|261749398|ref|YP_003257083.1| hypothetical protein BPLAN_316 [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497490|gb|ACX83940.1| conserved hypothetical protein [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 395 Score = 45.0 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 29/208 (13%), Positives = 57/208 (27%) Query: 144 YLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIIL 203 + + + Y + + + + I + Y + L + L Sbjct: 176 FFYRDNPYEGKTYSYQMVHFNSFIQSFKKPLIEYKNLDYYYDDSYKTLDTKKLMEKIHFL 235 Query: 204 NDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPE 263 S K F+ + + + + L + L L R + Sbjct: 236 KKKNCQLYSDFQKLNYNSLFQKKKIFFKRSKNKKRSLLLHISILIDELQHQKKFLQNRKK 295 Query: 264 LLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFS 323 L Y+ E K+ T + +I LI + I I + Sbjct: 296 HLAKYQFELQKKFTFPVTCIIMFLIGAPLGAIIRKGGMGRPTLIAIIIFIIYHTLLTITQ 355 Query: 324 YIIHKIEQNPYYIPILYLFLFCISSIFL 351 K E P+ + F+F SI++ Sbjct: 356 NQGEKAEIWPWIGAWIPNFVFFPLSIWI 383 >gi|315638229|ref|ZP_07893411.1| integral membrane protein [Campylobacter upsaliensis JV21] gi|315481765|gb|EFU72387.1| integral membrane protein [Campylobacter upsaliensis JV21] Length = 350 Score = 45.0 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 31/290 (10%), Positives = 75/290 (25%), Gaps = 11/290 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M F +I ++F + +V I +L + S N++L ++ + Sbjct: 1 MSIFFHFISSIYLKNFFILFFALVGFYCGIDLLLNFKDL---PASANLILLYVLFVGFSA 57 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + P +M RN E + + G S+ +I A+L Sbjct: 58 VTYILPISLIFALVLSFLTMIRNNEFVSLYALGLSKNRVIIYPFLWALLFCFIYVGLNFT 117 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + L L + K + + I +D Sbjct: 118 SFAYANEYKRSILKNGVLNKKS------SDIFLKFNEEFVYVKSLDEGVAKELKIFSLKD 171 Query: 181 TQTHKIYYAQSGSIDLDRQAIILND--GEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + A+ + + + + + F + Sbjct: 172 GNLSHLIQAKRALFNENSWLLEEGNITYIPKEFALGENGYKSENFANLETLEGFKPKLAK 231 Query: 239 VLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 + + + + + + + + +K + F LI Sbjct: 232 SVASGKEYSIYDAYQSLILFDSQGLNTRNVKITIYKLIFAPFFAPFLMLI 281 >gi|163785437|ref|ZP_02180046.1| hypothetical protein HG1285_10847 [Hydrogenivirga sp. 128-5-R1-1] gi|159879293|gb|EDP73188.1| hypothetical protein HG1285_10847 [Hydrogenivirga sp. 128-5-R1-1] Length = 313 Score = 44.6 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 39/325 (12%), Positives = 91/325 (28%), Gaps = 15/325 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK F Y+ + FL I + Q+L +++ + + + + Sbjct: 1 MKLFYKYLAKKFFYYFLTFLGIISLLIISSQMLNLPSIL--YHLDIFKFFQSILLINISF 58 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + F +A+ + + N E+ I + G S+ +K ++ L I+ + Sbjct: 59 LKLQFLFAYALSFLFLGYYLRENREIYAIYSAGISKNNFLKFIIGLNIIAVVVGLFISLY 118 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + PK + L+ F L D + +S + + Sbjct: 119 VVPKANRERIKFITVNVKKYFLEALQPKNFTTLPGDYIVYVSDKDKEKMKNVVIY----- 173 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + + +IL +G + S F + + + + Sbjct: 174 -NQKNGFLITAKKAFFKGTNLILYEGMLQ-------VPSKHGFNALIYKRYIFDLNIEYE 225 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 K L + + + +R+ L + + + R Sbjct: 226 KKYSIEDFRLKDLLTIAVSSNNSEKLKAIAVLSERIAYVLPFLFIPTMFFFIGLNISKDR 285 Query: 301 QRKKIHPIFISLSISFGVFWGFSYI 325 + I + ++ I Sbjct: 286 DFILSVALGILVIYISINYYLIKLI 310 >gi|332877577|ref|ZP_08445321.1| conserved domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332684426|gb|EGJ57279.1| conserved domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 150 Score = 44.2 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 14/152 (9%), Positives = 46/152 (30%), Gaps = 3/152 (1%) Query: 209 HRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETY 268 + I + + + + + A ++NL L L Y Sbjct: 1 RKIETADDIIERKEQLDTIFKFKIDDLMPMEYTAENKNLFELDKFIERERMKGSPNLNMY 60 Query: 269 RSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHK 328 ++R I LI + ++ ++ + + + + F + Sbjct: 61 LLVKYRRWGAISTAFILTLIGVAV---SSVKKRGGMGINLMVGVVVGFTFVFFDRVFGTL 117 Query: 329 IEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + + P++ + + + + L ++ + + Sbjct: 118 AQTSGGLSPLMAVLIPNLIFLTLAILLLRKVR 149 >gi|224373131|ref|YP_002607503.1| putative permease YjgP/YjgQ [Nautilia profundicola AmH] gi|223589255|gb|ACM92991.1| putative permease YjgP/YjgQ [Nautilia profundicola AmH] Length = 340 Score = 44.2 bits (102), Expect = 0.034, Method: Composition-based stats. Identities = 45/353 (12%), Positives = 106/353 (30%), Gaps = 18/353 (5%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YI++ ++FL+ + F +I + + + S+ + L + Sbjct: 2 YFNYIIKKYAKNFLLILFSLAFFFVIIDFIANFSKLPDSSNLQVLYLYYIVLYSFDMFY- 60 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 P + M + EL+ + G S ++KP L + L+ ++ Sbjct: 61 --PLAIVFSFLFTMYYMIKFNELVSFYSLGFSVKKILKPFLTFSFLIFFIFIALDSGKMA 118 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 R + K Q + T +++ N + + + + Sbjct: 119 YVREYADSILNKRQYSNTNLFIKFNDKIIYIKKIKPILKEAIDIRVFVLKDGKVKKIISA 178 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 K + + + +ND ++ + + IV Sbjct: 179 KKAVFVNDIWQAKNAEITFINDKKITKI-------------RNDIFFLKNFKPKIVSNLK 225 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 N L + ++ + T S ++ L + GLI + R Sbjct: 226 KLNSISLYDAIIAIKIFKDVNVNTLLSMVFYKIFTALSLI--GLIIVFIFQVPIHQRISN 283 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + S+ ++ ++ I +Q +L + F I S + ++ K Sbjct: 284 VSLFLVKSVFLTILIWGIQLMIYKFSKQGVISPYVLMVPCFIIYSYGVYLLIK 336 >gi|291276764|ref|YP_003516536.1| YjgP/YjgQ family permease [Helicobacter mustelae 12198] gi|290963958|emb|CBG39797.1| putative integral membrane protein, permease YjgP/YjgQ family [Helicobacter mustelae 12198] Length = 338 Score = 44.2 bits (102), Expect = 0.035, Method: Composition-based stats. Identities = 51/350 (14%), Positives = 115/350 (32%), Gaps = 21/350 (6%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y+ I + F + + FI+ V+ ++ N+ + LL + YL+P + + P Sbjct: 5 YLFGSIAQIFFPFFIVLFFISSVVLLISIANITLVVKMNFMDLLLVFLYLMPGTVFFIIP 64 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 F L+ ++ + ELL+ + G S ++ + +A ++S+ L + P + Sbjct: 65 ITFFAACVLGLSRLSFDYELLVFFSLGVSPRKILAYFIPIAGIVSLVLLFFSLALIPLSK 124 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 S A+ + + + +L +L D L +N + + + D Sbjct: 125 SAYSDFIAEKRTKIDVNIRAGDLGQKLGDWLVYI--DSIKDNEYRDLVLFSGSDLGQESF 182 Query: 187 YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 AQ G ++ L+ + ++ + F++ + +K + + Sbjct: 183 VVAQKGRVENLAGVFRLSLQNGDAYFAKNNELQKVNFQNMMI--------QSEIKKINLS 234 Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 L+ + + + L L I R ++ Sbjct: 235 SYDLVAYWKSAFEGKKSQARRFSQAIMTSLFPLASIFFIPLFGIA---NPRFQRNLSYVY 291 Query: 307 PIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + + GV + +N + I L L + KK Sbjct: 292 ILSAVVGYFAGVHI--------LSENAPFFGIFALPLAWFFLGYYFFRKK 333 >gi|167004981|ref|ZP_02270739.1| hypothetical protein Cjejjejuni_01670 [Campylobacter jejuni subsp. jejuni 81-176] Length = 351 Score = 43.8 bits (101), Expect = 0.039, Method: Composition-based stats. Identities = 38/362 (10%), Positives = 95/362 (26%), Gaps = 16/362 (4%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLV-SSSTESLNILLKISGYLIPT 59 M F Y R + + F ++ I +L + ++ L ++ +S +P Sbjct: 1 MDIFSFY-FRDLFKKFFYYIFSLLGFYCGIDLLLNFKDLPKAANLDLLYVMFLSFSAVPY 59 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 VLP+ F + +++ + + + + + LF Sbjct: 60 VLPISLIFALVVSLISMIRANEFVSLYALGLSRN----------YVILFPFLWALFFCCI 109 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 I S K + + + ++ L + N I Sbjct: 110 YIGLNFTSFAYANDYKRNILKNGTIMNQSGEVFLKFNNNFVYISKINNGQNSAQNIKIFN 169 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPI----SKDISIMKFKSYTLQTESANS 235 + + + + + ++ IL DG + + + I F Sbjct: 170 INDLNLSSFVSAKNAHFEGESWILRDGNITLLPKNYELANDGLKIQDFSELKSLEGFKPK 229 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 + +N + + +T + +K + F LI Sbjct: 230 IIEGVASNSDYSISDALESFELFKAQNVNTDTLKINLYKFVFTPFFAPFLMLIMYYFFPV 289 Query: 296 RALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 A + + +++ + + I I+ + + K Sbjct: 290 IARFFNLAIVTFVTFVVTLMIWGVLFLLTRLSENSVIASEIGIVVPIIILGCLSAYMYYK 349 Query: 356 KK 357 + Sbjct: 350 HR 351 >gi|221060807|ref|XP_002261973.1| hypothetical protein, conserved in Plasmodium species [Plasmodium knowlesi strain H] gi|193811123|emb|CAQ41851.1| hypothetical protein, conserved in Plasmodium species [Plasmodium knowlesi strain H] Length = 692 Score = 43.8 bits (101), Expect = 0.042, Method: Composition-based stats. Identities = 24/241 (9%), Positives = 59/241 (24%), Gaps = 8/241 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y + L+ + + + + ++ +++L + G L + Sbjct: 460 MNKIYKYAVYSFFGELLVISIIVFSLFI-------LRIIIKDNNKFSVILTMYGILY-KI 511 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + +L+ I + L I L + + +NI Sbjct: 512 FCYIFAHYVLVMGLYILSIYYNIYRSKDISENNFNFFCYHYVCNNLHIHLLMLFYAFQNI 571 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 I + + + E + + Y +P + + Sbjct: 572 IFTINDTFNCIRMMFIIVKHIIVRIYEKITCKNFITFYELKEDKSPLSLNCMNKFKKKCN 631 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 ID+D + D + + T + N + Sbjct: 632 MNNKCCRDKTCVEIDIDEIHELEYDKSQMPFPSLHQKPYCKNLDIKTYEQSLLNMRNPIF 691 Query: 241 K 241 K Sbjct: 692 K 692 >gi|34763638|ref|ZP_00144567.1| Hypothetical Membrane Spanning Protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27886691|gb|EAA23835.1| Hypothetical Membrane Spanning Protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 176 Score = 43.8 bits (101), Expect = 0.043, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 56/133 (42%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 K ++YI + + FLM+ + + + + Q + I ++ + + L+P + Sbjct: 3 KKMDIYISKYFIKFFLMNIIGFMGVFLLAQTFKIIKYINQGKLAGGEIFDYIINLLPKMF 62 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 P + ++ M N E++ + +G + +++ L +A ++S+ +F N I Sbjct: 63 VETAPLSVLLAGLITISIMASNLEIVSLKTSGIRFLRIVRAPLIIAFVISLIVFFINNSI 122 Query: 122 EPKCRSTIKQLSA 134 K + I Sbjct: 123 YTKSLAKINFYRR 135 >gi|152993636|ref|YP_001359357.1| hypothetical protein SUN_2059 [Sulfurovum sp. NBC37-1] gi|151425497|dbj|BAF73000.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1] Length = 361 Score = 43.4 bits (100), Expect = 0.048, Method: Composition-based stats. Identities = 46/358 (12%), Positives = 105/358 (29%), Gaps = 15/358 (4%) Query: 5 ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 Y+ + ++ L + F I Q + S N + Y+ L ++ Sbjct: 11 FRYLAKHYIKNLLAILFGLSFAFAAIDYFQYTEELQG---SWNYKILYIFYMWQEALGLL 67 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI--SENIIE 122 P + + + + G ++ L PV +A L + Sbjct: 68 YPLAIVFAVIMTKLTFVKQNTMGALHAFGYTKKRLFSPVFVIASLTYAVFIYLHTTEFSY 127 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 K ++ + + + + + N F L + K + + Sbjct: 128 AKDKANMLLKNQVHAYNVNDMFFKYNDTFVYIKKLNPIVKKIKGITIFKVAGYQVRYTIK 187 Query: 183 THKIYYAQSGSIDLDR--QAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + I + + I +GE+ R S K+ ES + Sbjct: 188 APVAVFNGEEWIAQNATVKTHIYQNGELVRYSMDQKESIATLHGYKPKIIESLYEGKALN 247 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + N LL + + R+ + ++ LF + LI A + Sbjct: 248 IIDAYNTWKLL-------EIQHLDSDKIRATIYNKVIVPLFALALLLILFFKLPFHARMM 300 Query: 301 QRKKIHPIFISLSISF-GVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + ++ GV +G I P + ++ + L + +I++ ++ Sbjct: 301 NFGVVVAFSLGVTFLIWGVLFGLEQIGLNGVLKPEFTAVMPIVLLWLYAIYVYFTDER 358 >gi|306842049|ref|ZP_07474722.1| permease YjgP/YjgQ family protein [Brucella sp. BO2] gi|306287890|gb|EFM59310.1| permease YjgP/YjgQ family protein [Brucella sp. BO2] Length = 286 Score = 43.4 bits (100), Expect = 0.057, Method: Composition-based stats. Identities = 34/290 (11%), Positives = 78/290 (26%), Gaps = 14/290 (4%) Query: 74 TNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIK--- 130 L S+NR EL++ + G S + P F A+L + N + S + Sbjct: 1 MATLISLNRKYELVVARSVGVSAWQFLLPACFGALLFGLATIFILNPLAAHGFSKAEEIA 60 Query: 131 -QLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYA 189 ++ + + I T D Q + Sbjct: 61 AMWKTGKVTDVSALRDPWLRQKTDEGETIIGAKSILNQGTTLADATFIQFDEQKNIKDRY 120 Query: 190 QSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSF 249 + + L L D ++ ++ + Q + + Sbjct: 121 DARTATLQDGYWELTDVMRF---ARGQEPQKLETFRISTQLRPEYVEEKLASPETIPFTQ 177 Query: 250 LLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIF 309 L + + ++ L + LI+ + VR + I Sbjct: 178 LRHK-IEVARSFGYSANAFDMQYQSLLALPALLMAMTLIAATVSL--KFVRFGQSGAMIL 234 Query: 310 ISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFL---LMIKK 356 + F ++ S ++ + P + ++ + + F ++ K Sbjct: 235 GGVIAGFVLYVV-SVLVKAFGDAGFVPPFVAAWVPVVIATFFGVSFLLHK 283 >gi|29840523|ref|NP_829629.1| YjgP/YjgQ family protein [Chlamydophila caviae GPIC] gi|29834872|gb|AAP05507.1| YjgP/YjgQ family protein [Chlamydophila caviae GPIC] Length = 367 Score = 43.4 bits (100), Expect = 0.060, Method: Composition-based stats. Identities = 56/366 (15%), Positives = 121/366 (33%), Gaps = 12/366 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW-----VIQILQRINLVSSSTESLNILLKISGY 55 M ++ Y+L S L+S + + F+ + + ++ + +S SL + + Sbjct: 1 MYIWKRYVLTKFWLS-LVSLIVLAFVFYASIHHSLHAIKGNSTALASGASLKLSVLYYLS 59 Query: 56 LIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLF 115 I + P A+ TT L SM E+L++ +G S +L P++ + ++++ L+ Sbjct: 60 QIALKAEFLIPQLVAVATTITLFSMQNKREVLLLQASGLSLKSLTAPLIRSSFIITLLLY 119 Query: 116 ISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI 175 + + P C + L + + + D + + S TL +F Sbjct: 120 ANFQWLHPICEKISTTKEHMDRGTLDKAQDKVPALYLKDQTVLLYSSIEQKALTLNKVFW 179 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + + T A + +I +S+ + +F Sbjct: 180 IKNPKTIYTMEKLAFTTPSLPIGLDVIRFSETESGTMELSEFSDMKEFPEIEFGFYDNPF 239 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRP------ELLETYRSEFHKRLTQWLFPVIFGLIS 289 S I LS P N + + + S F+ L L + ++S Sbjct: 240 SKIFTAGGKNRLSESFRAIPWNATGLGLSTTIPQRISSLLSTFYYMLISPLACISAMILS 299 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 + + V + + + +F VF ++ P +L+ + Sbjct: 300 AYLCLRFSRVPTVTLAYLVPLGTINTFFVFLKAGMVLSNSSVLPILPVMLFPLVVLAIFT 359 Query: 350 FLLMIK 355 K Sbjct: 360 NYAYAK 365 >gi|253827767|ref|ZP_04870652.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|253511173|gb|EES89832.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] Length = 314 Score = 43.1 bits (99), Expect = 0.063, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 103/315 (32%), Gaps = 16/315 (5%) Query: 44 ESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPV 103 S LL + Y +P ++ V P F + T L+ ++ + EL ++ G + +IK Sbjct: 16 ISFFELLSLYFYTLPLMIFFVIPLSFFVACTLSLSRLSFDYELPVLFALGMNPSKIIKIF 75 Query: 104 LFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISK 163 +A L+S LFI ++ P + +Q + + ++ + +L D L Sbjct: 76 FPIAALVSFSLFILSLVLTPLSDTAYRQFLEERKNSININLQAGEFGQKLGDWLVYVQKS 135 Query: 164 YNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKF 223 IV + + ++ + I + + P + + F Sbjct: 136 K---EDSSYENIVLLSFAKEGGMIFSDNAKIVNQMGVMEAILEKGSIYRPKEDFVEKILF 192 Query: 224 KSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPV 283 + +++ + L + R L+ ++ Sbjct: 193 DTLIIRSSITAIDEVDLGVIGYWKRAFYENDRQKKTLRN-------------LSMYVMMS 239 Query: 284 IFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFL 343 F L+S+ + R + + + G+F+ Y+ ++L Sbjct: 240 CFPLVSLFFFPLLGVKNPRYQKNYTILQAMGVIGIFYALMYLFASYLPLLGMFIFPIIWL 299 Query: 344 FCISSIFLLMIKKKY 358 +F +IKK Y Sbjct: 300 LLGYLLFERVIKKYY 314 >gi|255536803|ref|XP_002509468.1| kinase, putative [Ricinus communis] gi|223549367|gb|EEF50855.1| kinase, putative [Ricinus communis] Length = 728 Score = 43.1 bits (99), Expect = 0.072, Method: Composition-based stats. Identities = 42/322 (13%), Positives = 88/322 (27%), Gaps = 19/322 (5%) Query: 16 FLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAME-TT 74 FL+ + + I + Q + + V + S ++LL + +L + F + Sbjct: 10 FLLVLVLVSIILFCQQPILATDFVYNGFNSSSLLLYGYAVIESRILSLTNETTFTIGRAL 69 Query: 75 NVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN-IIEPKCRSTIKQLS 133 ++ + TS I + P + + IE + L Sbjct: 70 YPSKIRTKDPNSSYVYPFSTSFIFAMAPYKNVLPGHGLVFIFVPIAGIEGTTTAQNLGLF 129 Query: 134 AKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGS 193 + +++ F + + I+ + + + + D S Sbjct: 130 NRTNDGNPNNHVLGIEFDVFSNQEFNDINDNHVGIDVNSLTSRFAEDAGYWLDDRRSSSE 189 Query: 194 IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNP 253 + + LN+GE ++ + + + A T N+S L+ Sbjct: 190 DMKSFKRLKLNNGENYQV--------WIDYADSLINITMAPVGTRRPSRPLLNVSIDLSG 241 Query: 254 NPNNPNYRPELLETYR-SEFHKRLTQWLFPVIFGL--------ISIVAADKRALVRQRKK 304 Y T R E HK L F L + K + R + Sbjct: 242 IFEEEMYVGFTASTGRLVESHKILAWSFSNSDFSLSDRLITVGLPSFVLPKGSFFRSKGF 301 Query: 305 IHPIFISLSISFGVFWGFSYII 326 I + + Sbjct: 302 IAGATAGSFVVIVSAALITLFF 323 >gi|15618903|ref|NP_225189.1| hypothetical protein CPn0995 [Chlamydophila pneumoniae CWL029] gi|15836526|ref|NP_301050.1| hypothetical protein CPj0995 [Chlamydophila pneumoniae J138] gi|16752032|ref|NP_445398.1| hypothetical protein CP0860 [Chlamydophila pneumoniae AR39] gi|33242364|ref|NP_877305.1| hypothetical protein CpB1032 [Chlamydophila pneumoniae TW-183] gi|4377324|gb|AAD19132.1| CT838 hypothetical protein [Chlamydophila pneumoniae CWL029] gi|7189772|gb|AAF38649.1| conserved hypothetical protein [Chlamydophila pneumoniae AR39] gi|8979368|dbj|BAA99202.1| CT838 hypothetical protein [Chlamydophila pneumoniae J138] gi|33236875|gb|AAP98962.1| hypothetical protein CpB1032 [Chlamydophila pneumoniae TW-183] gi|269302795|gb|ACZ32895.1| putative permease, YjgP/YjgQ family [Chlamydophila pneumoniae LPCoLN] Length = 366 Score = 42.7 bits (98), Expect = 0.095, Method: Composition-based stats. Identities = 50/359 (13%), Positives = 115/359 (32%), Gaps = 12/359 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW--VIQILQRINLV--SSSTESLNILLKISGYL 56 M ++ ++L + L S L + I + + L + ++S S+ + + Sbjct: 1 MLIWKRHLLTRFWFA-LTSLLVLALIFYASIHHSLHTLKGASTAASGASVKLSILYYLAQ 59 Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 I + P A+ TT+ L +M E++++ +G S +L+ P+L ++ + L+ Sbjct: 60 ISLKAEFLMPQLVAVATTSTLFAMQNKREIILLQASGLSLKSLMHPLLLSGAVIMMVLYA 119 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + + P C + + + D + + S TL +F + Sbjct: 120 NFQWLHPICEKISITKENMDRGTTDKEQGKIPALYLKDQTVLLYSSIEPKTLTLNNVFWI 179 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 T A + + + + + +F S Sbjct: 180 KDPKTIYTMEKLAFTTLSLPIGLNVTQFFANDSENLELKEFFDMKEFPEIEFNFYENPFS 239 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRP------ELLETYRSEFHKRLTQWLFPVIFGLISI 290 + N LS P N + + + ++F+ L L + ++S Sbjct: 240 KLFSAGNKNRLSEFFKAIPWNATGLGLSTQVPQRILSLLAQFYYVLISPLACMAAIILSA 299 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 + + + I + F VF ++ P P++ L + + Sbjct: 300 YLCLRFSRTPTVTLAYLIPLGTVNIFFVFLKAGIVLASSSVLPTL-PVMAFPLIVLFLL 357 >gi|224373192|ref|YP_002607564.1| putative permease YjgP/YjgQ [Nautilia profundicola AmH] gi|223589644|gb|ACM93380.1| putative permease YjgP/YjgQ [Nautilia profundicola AmH] Length = 323 Score = 42.7 bits (98), Expect = 0.097, Method: Composition-based stats. Identities = 46/339 (13%), Positives = 103/339 (30%), Gaps = 28/339 (8%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y++ F+M L + + +I I+ N+ ++ + L K+ +P V Sbjct: 1 MDRLSKYLISGFWPIFIMIFLILFLVTSIIIIISIANITANIHITFGELFKMYMLSLPKV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + F + ++ + EL+ + ++G TL+KP LFL++LL+I + I Sbjct: 61 LFITLSISFFISAVSLFAKHSETQELIALFSSGVKPYTLLKPFLFLSLLLTIVNLLILFI 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 P + K + Q A F++ + R + SK ++ + Sbjct: 121 SIPYAKVAFKNFKNQKQQAAKFNFQTSQISQRFGNWNIFTSSKKGKTYENIILY-----N 175 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + +++ A+ + + + + + I + ++ S Sbjct: 176 NKENQLILAKYAELKNKNGYLNFELKKGNVYAFDKSTIINFGKMQINQKIPKSSYSIFRF 235 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + L + LI + R Sbjct: 236 SEYFKKFKELFA-----------------------FYLPFALLPLSLIFFIPPISFFHPR 272 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL 339 K I+ I + + + + Sbjct: 273 IYKNRSLIYAIALIVIYLVLTKITSSLAVNSLICLLFFI 311 >gi|332088227|gb|EGI93348.1| hypothetical protein SD15574_3353 [Shigella dysenteriae 155-74] Length = 109 Score = 42.7 bits (98), Expect = 0.099, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 45/106 (42%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFL 106 L M+ P + L M ++E+ I G R KP Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGAVRDACTKPFFIW 106 >gi|41406992|ref|NP_959828.1| hypothetical protein MAP0894c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395343|gb|AAS03211.1| hypothetical protein MAP_0894c [Mycobacterium avium subsp. paratuberculosis K-10] Length = 207 Score = 42.3 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 14/96 (14%), Positives = 33/96 (34%), Gaps = 10/96 (10%) Query: 269 RSEFHKRLTQWLFPVIFGLISIVA------ADKRALVRQRKKIHPIFISLSISFGVFWGF 322 R + LF + G +++V L R+ + + ++F + G Sbjct: 113 LIAGWWR-SDRLFCIAVGFLALVFAATTVSGVIGLLQRRSVSRYLLLAGALVAFLTYIGV 171 Query: 323 SYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 ++ + +P+L + LL K++ Sbjct: 172 FIAGARVAWVVHLLPVL---PIATVVLVLLPQAKRW 204 >gi|328676744|gb|AEB27614.1| Permease YjgP/YjgQ family protein [Francisella cf. novicida Fx1] Length = 276 Score = 42.3 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 38/275 (13%), Positives = 91/275 (33%), Gaps = 12/275 (4%) Query: 86 LLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYL 145 + + G + + ++K L + L+I I+ + P + T+ A S + Sbjct: 1 MFVTLAGGITWMQIVKNTLKPVVALTIITLITVMYLNPLSKQTLDIYKASLSAKALLSSI 60 Query: 146 EENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAII--L 203 + + D I I + N ++ +K+ A + I D+ A Sbjct: 61 TDQKIIKAPDGKIIYIGNKSGNTLSDVFLYQNTPQDGEYKVMTAPTAKIVSDKTAAYIDF 120 Query: 204 NDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPE 263 + ++ K+ + + S K + D+ L Sbjct: 121 MNVNIYTKNSQNSEYSYDNAKKAIYTIFDNSDRDYNHDRVDR----LYMHTLIENFNDKT 176 Query: 264 LLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFS 323 Y++EF R+ + ++ S++A L ++ K + S+ + ++ + Sbjct: 177 NGTAYKAEFFGRINNAISVIVS---SLLALALCRLRPRQNKYAKLLPSVVV-LAIYLCTN 232 Query: 324 YIIHKIEQNPYYIPIL--YLFLFCISSIFLLMIKK 356 I+ + N + +L + + I+K Sbjct: 233 MFINTLMANGSVPVWIGFWLPHIFFTIFAVRTIRK 267 >gi|254773952|ref|ZP_05215468.1| hypothetical protein MaviaA2_04659 [Mycobacterium avium subsp. avium ATCC 25291] Length = 196 Score = 42.3 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 14/96 (14%), Positives = 33/96 (34%), Gaps = 10/96 (10%) Query: 269 RSEFHKRLTQWLFPVIFGLISIVA------ADKRALVRQRKKIHPIFISLSISFGVFWGF 322 R + LF + G +++V L R+ + + ++F + G Sbjct: 102 LIAGWWR-SDRLFCIAVGFLALVFAATTVSGVIGLLQRRSVSRYLLLAGALVAFLTYIGV 160 Query: 323 SYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 ++ + +P+L + LL K++ Sbjct: 161 FIAGARVAWVVHLLPVL---PIATVVLVLLPQTKRW 193 >gi|167949851|ref|ZP_02536925.1| permease YjgP/YjgQ [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 136 Score = 42.3 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 15/111 (13%), Positives = 29/111 (26%), Gaps = 1/111 (0%) Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 ++ L Y F +L L ++ +SI Sbjct: 3 PHMLPAWDLWAYVAFLKQNGLSAAQYEVAFWSKLVVPLVTLVMLFLSIPFVFGPLRSVGI 62 Query: 303 KKIHPIFISLSISFGVFW-GFSYIIHKIEQNPYYIPILYLFLFCISSIFLL 352 + + F +F F+Y+ E N + LF + + Sbjct: 63 GQRVFTGAVVGTLFFMFNRVFTYLGVVYEFNALFTAAFPTLLFLLRGAVVF 113 >gi|118464849|ref|YP_880326.1| hypothetical protein MAV_1072 [Mycobacterium avium 104] gi|118166136|gb|ABK67033.1| conserved hypothetical protein [Mycobacterium avium 104] Length = 196 Score = 42.3 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 14/96 (14%), Positives = 33/96 (34%), Gaps = 10/96 (10%) Query: 269 RSEFHKRLTQWLFPVIFGLISIVA------ADKRALVRQRKKIHPIFISLSISFGVFWGF 322 R + LF + G +++V L R+ + + ++F + G Sbjct: 102 LIAGWWR-SDRLFCIAVGFLALVFAATTVSGVIGLLQRRSVSRYLLLAGALVAFLTYIGV 160 Query: 323 SYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 ++ + +P+L + LL K++ Sbjct: 161 FIAGARVAWVVHLLPVL---PIATVVLVLLPQTKRW 193 >gi|89898055|ref|YP_515165.1| hypothetical protein CF0248 [Chlamydophila felis Fe/C-56] gi|89331427|dbj|BAE81020.1| conserved hypothetical protein [Chlamydophila felis Fe/C-56] Length = 367 Score = 42.3 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 57/366 (15%), Positives = 121/366 (33%), Gaps = 12/366 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAW-----VIQILQRINLVSSSTESLNILLKISGY 55 M ++ Y+L S L+ + + FI + + ++ +S SL + + Sbjct: 1 MYIWKRYVLTKFWLS-LVFLIVLAFIFYASIHHSLHAIKGNATPLASGASLKLSILYYLS 59 Query: 56 LIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLF 115 I + P A+ TT L SM E+L++ +G S +L P++ + ++++ L+ Sbjct: 60 QIALKAEFLIPQLVAVATTLTLFSMQNKREVLLLQASGLSLKSLTAPLIVSSFIITLLLY 119 Query: 116 ISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI 175 + + P C + L + + + + D + + S TL +F Sbjct: 120 ANFQWLHPICEKISTTKEHIDRGTLDKAQDKVPVLYLKDQTVLLYSSIEQKTLTLNKVFW 179 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS 235 + + T A + +I G +S+ + +F Sbjct: 180 IKNPKTIYTMEKLAFTTPSLPIGLDVIRFSGTESGNMELSEFSDMKEFPEIEFGFYDNPF 239 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRP------ELLETYRSEFHKRLTQWLFPVIFGLIS 289 S I LS P N + + + S F+ L L + ++S Sbjct: 240 SKIFTAGGKNRLSESFRAIPWNATGLGLSTTVPQRILSLLSTFYYMLISPLACISAMILS 299 Query: 290 IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSI 349 + + V + + + +F VF ++ P +L+ + Sbjct: 300 AYLCLRFSRVPTVTLAYLVPLGTINTFFVFLKAGIVLSNSSVLPTLPVMLFPLIALAIFT 359 Query: 350 FLLMIK 355 K Sbjct: 360 NYAYAK 365 >gi|194323556|ref|ZP_03057333.1| hypothetical protein FTE_1717 [Francisella tularensis subsp. novicida FTE] gi|208779047|ref|ZP_03246393.1| hypothetical protein FTG_1341 [Francisella novicida FTG] gi|194322411|gb|EDX19892.1| hypothetical protein FTE_1717 [Francisella tularensis subsp. novicida FTE] gi|208744847|gb|EDZ91145.1| hypothetical protein FTG_1341 [Francisella novicida FTG] Length = 283 Score = 42.3 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 34/288 (11%), Positives = 91/288 (31%), Gaps = 7/288 (2%) Query: 70 AMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTI 129 + L+ + N+E++++ + G S + K V+ + ++ S+ + I P + + Sbjct: 1 MVGALMGLSLLANNSEIIVLRSFGRSTAQIAKGVILVGLIGSVTTMVFGGYIAPILQRQV 60 Query: 130 KQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYA 189 + + + + + +Q + + R ++ Sbjct: 61 DTNMVTYNTHDLWFKTPDGFMNIANIEPTKGKAYGIRKFMVQDNKVREIRYAESATYIND 120 Query: 190 QSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSF 249 S ++ R+ I S K I I+ + + + S + + N Sbjct: 121 ASANVFNIRKIIF-------PASDGQKHIDIVTNMTNAVWSNPIPISVAKVITINDNDYL 173 Query: 250 LLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIF 309 + + + ++ +F + + Q L +I L+++ + + Sbjct: 174 NFSQLTSYMLSNSQAKDSISLKFWQEVFQPLSLMILILLAVPLSIGSTRSSTLILKLLLG 233 Query: 310 ISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 +F + I I P + + + + L IK K Sbjct: 234 AFFGFAFFIINQIFGPIALILHLPPILGAAGPTVIALILLIYLFIKSK 281 >gi|71083417|ref|YP_266136.1| permease YjgP/YjgQ family protein [Candidatus Pelagibacter ubique HTCC1062] gi|91762160|ref|ZP_01264125.1| Predicted permease YjgP/YjgQ family protein [Candidatus Pelagibacter ubique HTCC1002] gi|71062530|gb|AAZ21533.1| Predicted permease YjgP/YjgQ family protein [Candidatus Pelagibacter ubique HTCC1062] gi|91717962|gb|EAS84612.1| Predicted permease YjgP/YjgQ family protein [Candidatus Pelagibacter ubique HTCC1002] Length = 357 Score = 42.3 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 52/358 (14%), Positives = 118/358 (32%), Gaps = 8/358 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK++ +++ S L + I + IL++I + S L +S P+V Sbjct: 1 MKTYIKFLINLFNISLLKIFITFFIIILITNILEQIEFFKNIDLSFFYLFFLSLLNTPSV 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKP---VLFLAILLSIFLFIS 117 L + PF F + T + EL + +G + I +IK F+ ++ + F + Sbjct: 61 LFEILPFIFLLGTQVFFIHLIDKNELQVFKYSGLNNIKIIKILGLYSFILGIIMVIFFYN 120 Query: 118 ENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVD 177 + I IK + L +D I+ NN + Sbjct: 121 GSSILKNSYLLIKNNYSGDNKYLAVITENGLWIKDEINDNINIINARQVNNEFLLNVSIT 180 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSST 237 + + QS +D+ + + + + S + + ++ Sbjct: 181 KFNKDFDLVEVLQSERVDITSKKWKIFN----PITLKGNSQSTLNELILHSNFDLQKINS 236 Query: 238 IVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 + + ++ L+ + + + S K ++ ++ + + S + Sbjct: 237 LFSNLSSLSIIDLITLRKSYMSLN-YSVTDINSHLLKIVSYPVYLTLITIFSAIIMFNIG 295 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIK 355 + + I LS+ F ++ E+ P + I + F+ +IK Sbjct: 296 YQKNTFYKITLGIFLSVIIYYINNFLSVLGTNEKIPVTLSIFLPLIILSIINFISIIK 353 >gi|328676743|gb|AEB27613.1| conserved membrane protein of unknown function [Francisella cf. novicida Fx1] Length = 283 Score = 42.3 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 34/288 (11%), Positives = 90/288 (31%), Gaps = 7/288 (2%) Query: 70 AMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTI 129 + L+ + N+E++++ + G S + K V+ + ++ S+ + I P + + Sbjct: 1 MVGALMGLSLLANNSEIIVLRSFGRSTAQIAKGVILVGLIGSVTTIVFGGYIAPILQRQV 60 Query: 130 KQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYA 189 + + + + + +Q + + R + Sbjct: 61 DTNMVTYNTHDLWFKTPDGFMNIANIEPTKGKAYGIRKFMVQDNKVREIRYAENATYIND 120 Query: 190 QSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSF 249 S ++ R+ I S K I I+ + + + S + + N Sbjct: 121 ASANVFNIRKIIF-------PASDGQKHIDIVTNMTNAVWSNPIPISVAKVITINDNDYL 173 Query: 250 LLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIF 309 + + + ++ +F + + Q L +I L+++ + + Sbjct: 174 NFSQLTSYMLSNSQAKDSISLKFWQEVFQPLSLMILILLAVPLSIGSTRSSTLILKLLLG 233 Query: 310 ISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 +F + I I P + + + + L IK K Sbjct: 234 AFFGFAFFIINQIFGPIALILHLPPILGAAGPTVIALILLIYLFIKSK 281 >gi|227504780|ref|ZP_03934829.1| ABC-2 type transporter [Corynebacterium striatum ATCC 6940] gi|227198630|gb|EEI78678.1| ABC-2 type transporter [Corynebacterium striatum ATCC 6940] Length = 707 Score = 41.9 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 11/71 (15%), Positives = 29/71 (40%) Query: 280 LFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL 339 L ++FG ++++ R + + I+F + G + + + +P P++ Sbjct: 521 LLVLVFGFLAMLLLSMTLPYYLRGILPAFALVSGINFLLLLGMALMSTLMGWHPASWPMM 580 Query: 340 YLFLFCISSIF 350 L I+ + Sbjct: 581 LGVLAAIAMVG 591 >gi|262363205|gb|ACY59926.1| membrane protein [Yersinia pestis D106004] Length = 116 Score = 41.9 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 39/90 (43%), Gaps = 4/90 (4%) Query: 269 RSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHK 328 R+EFH RLT + VI L+ + ++ ++ + ++ + F S + K Sbjct: 15 RAEFHWRLTLIVSVVIMALL---VVPLSVVNPRQGRVLSMLPAMLLYLIFFLLQSSLRSK 71 Query: 329 IEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 N P+++++ + + L +I + Sbjct: 72 AG-NGQLDPLVWMWAVNGAYLALAIILNLW 100 >gi|167621692|ref|YP_001672200.1| hypothetical protein Caul_5426 [Caulobacter sp. K31] gi|167351815|gb|ABZ74541.1| conserved hypothetical protein [Caulobacter sp. K31] Length = 230 Score = 41.9 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 34/171 (19%), Positives = 67/171 (39%), Gaps = 4/171 (2%) Query: 52 ISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLS 111 ++ L+P L + P F + V+T+++ ++E+ + G S ++ P + + +LL Sbjct: 1 MAANLLPHYLGLALPVAFFIALFIVITTLSDSSEIDALLAGGRSLTRIVAPFVVIGVLLG 60 Query: 112 IFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQ 171 +F I ++P R + + A A L F + L L Sbjct: 61 LFSVIVFGYLQPYSRYAFRSVMHAAITAGWNGRLPGRAFVEDGEQLITADESVAAGQALM 120 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAI----ILNDGEVHRKSPISKDI 218 GIFI + ++ A S S+ + +L DG + +D+ Sbjct: 121 GIFIKRPDANKREEVIAASSASLVAEPDGEKVALMLTDGRRTAQDGQGEDL 171 >gi|159040227|ref|YP_001539480.1| hypothetical protein Sare_4736 [Salinispora arenicola CNS-205] gi|157919062|gb|ABW00490.1| conserved hypothetical protein [Salinispora arenicola CNS-205] Length = 643 Score = 41.9 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 10/89 (11%), Positives = 30/89 (33%), Gaps = 3/89 (3%) Query: 276 LTQWLFPVIFGLISIVAADKRALV---RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN 332 L ++ ++ + + A R + +++I + + + I Sbjct: 409 LIFRWAVIVAPILGTIGLLRPASTGLRRLGNAVVAAVFNIAIFGTGAAIYLFAVDLIMST 468 Query: 333 PYYIPILYLFLFCISSIFLLMIKKKYTKI 361 P L + L + + ++ + Y +I Sbjct: 469 PTLPGWLQVVLVWLCGLVGWLLLRPYRRI 497 >gi|328675789|gb|AEB28464.1| conserved membrane protein of unknown function [Francisella cf. novicida 3523] Length = 283 Score = 41.9 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 35/288 (12%), Positives = 90/288 (31%), Gaps = 7/288 (2%) Query: 70 AMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTI 129 + L+ + N+E++++ + G S + K V+ + I+ SI + I P + + Sbjct: 1 MVGALMGLSLLANNSEIIVLRSFGRSTAQIAKGVVLVGIIGSITTIVFGGYIAPILQRQV 60 Query: 130 KQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYA 189 + + + + + +Q + + R ++ Sbjct: 61 DTNMVTYNTHDLWFKTPDGFMNIANIEPTKGKAYGIRKFMVQDNKVREIRYAESATYIND 120 Query: 190 QSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSF 249 S ++ + I + K I I+ + + + S + + N Sbjct: 121 ASANVFNISKIIF-------PSNDGQKHIDIVTNMTNAVWSNPIPISVAKVITINDNDYL 173 Query: 250 LLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIF 309 + + + ++ +F + + Q L +I L+S+ + + Sbjct: 174 NFSQLTSYMLSNSQAKDSISLKFWQEVFQPLALMILILLSVPLSIGSTRSSTLILKLLLG 233 Query: 310 ISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 +F + I I P + + + + L IK K Sbjct: 234 AFFGFAFFIINQIFGPIALILHLPPILGAAGPTVIALILLIYLFIKSK 281 >gi|255324255|ref|ZP_05365377.1| conserved hypothetical protein [Corynebacterium tuberculostearicum SK141] gi|255298771|gb|EET78066.1| conserved hypothetical protein [Corynebacterium tuberculostearicum SK141] Length = 247 Score = 41.9 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 7/86 (8%), Positives = 29/86 (33%), Gaps = 5/86 (5%) Query: 276 LTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY 335 L+ + I L++ + ++ ++ + S+ FG ++++ + Sbjct: 94 LSAAISLAIIVLLAFLLRSLANRSKRAGTSRRVWFAFSLYFGFRILLTFMVTPAGADVPD 153 Query: 336 IPILY-----LFLFCISSIFLLMIKK 356 + + + + L+ + Sbjct: 154 WLFAADGMVQILVGVAAVLGLIFSVR 179 >gi|315453577|ref|YP_004073847.1| putative integral membrane protein [Helicobacter felis ATCC 49179] gi|315132629|emb|CBY83257.1| putative integral membrane protein,Permease YjgP/YjgQ [Helicobacter felis ATCC 49179] Length = 355 Score = 41.5 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 37/360 (10%), Positives = 88/360 (24%), Gaps = 14/360 (3%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 ++ + + + + I LQ + + L + G L Sbjct: 2 RLWFFVGSYYLKYCFVILMALELFFIGIDSLQYADKFPDAANLLLLFFVYDGL---YALN 58 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIE 122 P + + R+ + + G S ++ P+L + + I Sbjct: 59 YTLPISLLLGLVLFYITFIRSNQYSALLAIGYSIRQILNPMLTINLFFIIIFVGLNATPF 118 Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + + K L Y+ K NP + + Sbjct: 119 VYMQDKAMAIIYKDNAGNVSENLLVKYNND-----YVYFGKINPLLQNAQNIKIFTLKND 173 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + D+ + +P+ + ++ L VL Sbjct: 174 ELSAVAQADHAAFKDKYWTLHQATIATLPTPLGLGDQGLLVENAPLLKTLKGFHPKVLDT 233 Query: 243 NDQN----LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRAL 298 QN + + + + R + + F + ++ +A L Sbjct: 234 IYQNKPAVSITDAFRSLHVLYRQHGDTKKIRGFLYVAILTPFFVPLTAIL--IARYTPNL 291 Query: 299 VRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKY 358 R + ++ ++ F + +Y + F I L +K Sbjct: 292 ARYENLALLSLKFIILALILWGLFFALGKFSIAGLFYPEFGIVIPFAILCGITLHHYRKL 351 >gi|330470505|ref|YP_004408248.1| hypothetical protein VAB18032_02820 [Verrucosispora maris AB-18-032] gi|328813476|gb|AEB47648.1| hypothetical protein VAB18032_02820 [Verrucosispora maris AB-18-032] Length = 646 Score = 41.5 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 12/82 (14%), Positives = 29/82 (35%) Query: 280 LFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL 339 + I G I ++ L R + +++I + + + I P L Sbjct: 416 IAAPILGTIGLLRPASAGLRRLGNAVVAALFNIAIFGTGAAIYLFAVDLIMSTPTLPGWL 475 Query: 340 YLFLFCISSIFLLMIKKKYTKI 361 + L + + ++ + Y +I Sbjct: 476 QVVLVWLCGVVGWLLLRPYRRI 497 >gi|152990135|ref|YP_001355857.1| hypothetical protein NIS_0386 [Nitratiruptor sp. SB155-2] gi|151421996|dbj|BAF69500.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2] Length = 343 Score = 41.5 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 43/355 (12%), Positives = 97/355 (27%), Gaps = 15/355 (4%) Query: 5 ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 Y+ + FL+ + + L + S S N+ + Y + ++ Sbjct: 3 YRYLAINYLKYFLLLLISLTLFFV---SLDYFQVFKSLPASANLQILYLYYKSLNAIDLL 59 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P + + R+ EL+ I G S+ ++ PV ++LL+I Sbjct: 60 FPITLIFALIALKNRLIRSNELVAIYALGYSKRGVVMPVFLTSLLLTILYLFLHLTSFAY 119 Query: 125 CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTH 184 + L+ L + + I Sbjct: 120 ADEYANNIKKYQSLSSATKDLFFKYNNDYVFF------EKLYPLNKRAQGIKVYELENQK 173 Query: 185 KIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAND 244 + S +++ L+D + S LQ V + Sbjct: 174 LQKIIFAQSATFQKRSWHLSDATIVEVSDGKLIERKA--DLSILQNYKPKILDSVYEGKS 231 Query: 245 QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKK 304 + ++ ++ +L F +I A + Sbjct: 232 SITLIDALEAIKLLKQQSLNVDRIKAIIFYQLLFPFFAPFLMIIIYYFVPVTA---RITN 288 Query: 305 IHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL-FLFCISSIFLLMIKKKY 358 ++ +++ + WGF + + K+ N + F + + L + KK+ Sbjct: 289 LNLFLFGATVTSLIVWGFLFTLVKLAFNGSLDAWYAIVFPISLLLVIALYLYKKF 343 >gi|311740970|ref|ZP_07714795.1| conserved hypothetical protein [Corynebacterium pseudogenitalium ATCC 33035] gi|311303772|gb|EFQ79850.1| conserved hypothetical protein [Corynebacterium pseudogenitalium ATCC 33035] Length = 221 Score = 41.1 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 7/86 (8%), Positives = 29/86 (33%), Gaps = 5/86 (5%) Query: 276 LTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY 335 L+ + I L++ + ++ ++ + S+ FG ++++ + Sbjct: 65 LSAAISLAIIVLLAFLLRSLANRSKRAGTSRRVWFAFSLYFGFRILLTFMVTPAGADVPD 124 Query: 336 IPILY-----LFLFCISSIFLLMIKK 356 + + + + L+ + Sbjct: 125 WLFAADGMVQILVGVAAVLGLIFSVR 150 >gi|257462586|ref|ZP_05626996.1| hypothetical protein FuD12_01959 [Fusobacterium sp. D12] Length = 93 Score = 41.1 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 37/91 (40%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK YIL+ ++S FI + I+ + + S+ + +I + +P + Sbjct: 3 MKIINSYILKESRGPIVLSVSIFTFIFLLDIIVTMMESIIVKGISVFDVARILSFYVPPI 62 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDN 91 L P + + R++E + +++ Sbjct: 63 LTQTLPLGLFVGIMITFSKFTRSSEAIAMNS 93 >gi|145540345|ref|XP_001455862.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124423671|emb|CAK88465.1| unnamed protein product [Paramecium tetraurelia] Length = 1270 Score = 41.1 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 31/336 (9%), Positives = 79/336 (23%), Gaps = 15/336 (4%) Query: 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVT 65 + + +F + I +Q + K+ + P ++ Sbjct: 101 RLLFFLTILMAIAEFVFFILIILSSDYIQGLYQSEKIGNDYQKFDKVVSVMKP----IIL 156 Query: 66 PFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKC 125 F + T N + + + L L + Sbjct: 157 IFSILIVVGLTYTIHNFYQMTISSITSRFNIYLLCIAASLTCWGSVYLLKGMDIYPISAI 216 Query: 126 RSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT--QT 183 + I + ++ L + I F Sbjct: 217 LNLIILGLIVFAIISNTWKIKGLLMILAALQILIIPVLLGFQAQYIRDFQEQQESNIANC 276 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSY-TLQTESANSSTIVLKA 242 + S S ++ ++ + + + + + Sbjct: 277 QQQMNNLSESYLSQHSCASKYIKDIQTQNCPNGEKECSVYSTTCDRDAQVQRWEEQTTDP 336 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQR 302 D L L N N + Y + + L +F L +++ + L R+ Sbjct: 337 ADHPLGCL------NLNCCKTVSNIYTKDLLILIMLSLATPLF-LFALIL-FEFHLSRRT 388 Query: 303 KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 + + ++ F + + + + + Y PI Sbjct: 389 RSDKTLGRNIETLFLLLFIGTIVFGILLLVNNYTPI 424 >gi|169837524|ref|ZP_02870712.1| Hypothetical membrane-spanning protein [candidate division TM7 single-cell isolate TM7a] Length = 125 Score = 40.8 bits (93), Expect = 0.32, Method: Composition-based stats. Identities = 15/116 (12%), Positives = 36/116 (31%), Gaps = 4/116 (3%) Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 KA + + L + L R EF+ R++ L + LI + + Sbjct: 10 KAKNLTMPELREKTVYFTRVGADSLN-LRIEFYYRISFALSSFVMCLIGLSL---GSRYV 65 Query: 301 QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + I +S+ I + + + + I + + + + + Sbjct: 66 RGGAALNIGLSVIIGYAYYGISTILRSMAVAGTVPIYAACFIPLIVFFVVGIKLFR 121 >gi|314936707|ref|ZP_07844054.1| probable membrane protein [Staphylococcus hominis subsp. hominis C80] gi|313655326|gb|EFS19071.1| probable membrane protein [Staphylococcus hominis subsp. hominis C80] Length = 372 Score = 40.8 bits (93), Expect = 0.33, Method: Composition-based stats. Identities = 26/261 (9%), Positives = 76/261 (29%), Gaps = 12/261 (4%) Query: 9 LRCIGRSFLMSCLF--IVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 + I F++ L + I+ I+IL I + +S +L ++L + ++ P Sbjct: 85 IWAIIVYFIICLLISFLALISMNIRILSGILFLIASIITLPLVLLF--------ITLIIP 136 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 F + + ++ + +T + + N E Sbjct: 137 IFFFITAIMMFARRSKIETVPAYGSTYDYPPYYNQRDDYDDRYYYEEEPTQYNDEEEYIE 196 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 K ++ ++ S + D + Y I++ N D + + Sbjct: 197 PPRKTKKSERRIRRKPS--SDYNEREHDYEDYHHITQNNDEQDFNDDIEEDKYNQYPKRA 254 Query: 187 YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 ++ D + +L+ ++ + + + ++ + + Sbjct: 255 ITSEYQQSSNDDTSGVLSRQRKYKYKSKNSMPNEVNDDENNVEKDLYIDKKEQKAQRKRE 314 Query: 247 LSFLLNPNPNNPNYRPELLET 267 + L + ++ Sbjct: 315 KAELRAKKKEKRKAYNQRMKE 335 >gi|332086637|gb|EGI91777.1| hypothetical protein SB521682_3571 [Shigella boydii 5216-82] Length = 109 Score = 40.8 bits (93), Expect = 0.35, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 44/106 (41%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 MK E YI+R R L+ F++FI + + ++ T +L+++L I Y + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFL 106 L M+ P + L M +E+ I G R KP Sbjct: 61 LEMLLPVGLYVSVGVTLGQMYTYSEITAISAAGAVRDACTKPFFIW 106 >gi|319951499|ref|ZP_08025305.1| apolipoprotein N-acyltransferase [Dietzia cinnamea P4] gi|319434849|gb|EFV90163.1| apolipoprotein N-acyltransferase [Dietzia cinnamea P4] Length = 552 Score = 40.8 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 11/77 (14%), Positives = 25/77 (32%), Gaps = 3/77 (3%) Query: 279 WLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVF---WGFSYIIHKIEQNPYY 335 W + L+ +V + + + + + F + W Y+ Sbjct: 28 WTAVLAIALLVVVLVPSGDRPPRARTGALLGLVSGLVFFLLLVPWVGMYVGAYASWGLSL 87 Query: 336 IPILYLFLFCISSIFLL 352 + LYL F ++ +L Sbjct: 88 VEALYLAAFGAGAVVIL 104 >gi|332708721|ref|ZP_08428693.1| putative permease [Lyngbya majuscula 3L] gi|332352575|gb|EGJ32143.1| putative permease [Lyngbya majuscula 3L] Length = 116 Score = 40.8 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 36/98 (36%), Gaps = 6/98 (6%) Query: 261 RPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFW 320 + L + +++ +IFGL+ + + ++ K + L + FG ++ Sbjct: 18 DRKKLRMLQVRMQQKIAFPFICIIFGLVGASISIRP---KRISKGTSFGVCLIVIFG-YY 73 Query: 321 GFSYIIHKIEQNPYYIPILYLFL--FCISSIFLLMIKK 356 S++I PI+ +L ++ + Sbjct: 74 LLSFVIGGFGIAGILSPIVAAWLPNLFGFGAGGWLLWR 111 >gi|119953584|ref|YP_945794.1| hypothetical membrane spanning protein [Borrelia turicatae 91E135] gi|119862355|gb|AAX18123.1| hypothetical membrane spanning protein [Borrelia turicatae 91E135] Length = 429 Score = 40.8 bits (93), Expect = 0.37, Method: Composition-based stats. Identities = 33/197 (16%), Positives = 77/197 (39%), Gaps = 1/197 (0%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 YI+ + FL++ LF F+ ++ QIL + ++ + Y +P ++ + P Sbjct: 11 YIIIEFFKYFLITFLFFFFVFFINQILFFMRILLQNYVPFLKAFIFVIYSLPMIIALSPP 70 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 F + + N E+L + G S L+ P L +++++ FI+ + + P Sbjct: 71 FAALLSVILTIYRFKLNNEILAFRSIGISIFNLLVPFFKLGVVIALISFITNDFLLPLGS 130 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 ++ + + + L+ + DL + + F ++R +I Sbjct: 131 IGRLKIFNEIKEEIPHLILKPYSSKQYG-DLIFVSGEKSETGYKNVTFFDNTRLKGYDRI 189 Query: 187 YYAQSGSIDLDRQAIIL 203 A+ +I + + Sbjct: 190 LMARELNIQKENYQVYF 206 >gi|289803331|ref|ZP_06533960.1| putative permease [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 258 Score = 40.8 bits (93), Expect = 0.37, Method: Composition-based stats. Identities = 38/258 (14%), Positives = 94/258 (36%), Gaps = 5/258 (1%) Query: 9 LRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFC 68 +R +S L ++ I + ++++ + N++L + G +P + ++ P Sbjct: 1 MRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLS 60 Query: 69 FAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRST 128 + L + +E+ ++ G S+ L+K + LA+ I ++ P Sbjct: 61 LFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMVLALFTGILAAVNVMWAGPWSSKH 120 Query: 129 IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT--HKI 186 ++ A+A+ + L + F + + + + + +F+ R + Sbjct: 121 QDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFHDVFLAQIRPKGNARPSV 180 Query: 187 YYAQSGS---IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 A SG + Q + LN G + + +D I F++Y + + Sbjct: 181 VVADSGHLTQLRDGSQVVTLNKGTRFEGTALLRDFRITDFQNYQAIIGHQAVALDPNDTD 240 Query: 244 DQNLSFLLNPNPNNPNYR 261 ++ L N + + Sbjct: 241 QMDMRTLWNTDNDRARAE 258 >gi|329943109|ref|ZP_08291883.1| hypothetical protein G5Q_0788 [Chlamydophila psittaci Cal10] gi|332287691|ref|YP_004422592.1| conserved hypothetical membrane transport protein [Chlamydophila psittaci 6BC] gi|313848265|emb|CBY17266.1| conserved hypothetical membrane protein [Chlamydophila psittaci RD1] gi|325506677|gb|ADZ18315.1| conserved hypothetical membrane transport protein [Chlamydophila psittaci 6BC] gi|328814656|gb|EGF84646.1| hypothetical protein G5Q_0788 [Chlamydophila psittaci Cal10] gi|328914944|gb|AEB55777.1| YjgP/YjgQ family protein [Chlamydophila psittaci 6BC] Length = 367 Score = 40.8 bits (93), Expect = 0.39, Method: Composition-based stats. Identities = 59/365 (16%), Positives = 118/365 (32%), Gaps = 10/365 (2%) Query: 1 MKSFELYILRCIGRSFL-MSCLFIVFIAWVIQILQRIN---LVSSSTESLNILLKISGYL 56 M ++ Y+L S + + L VF A + L I +S SL + + Sbjct: 1 MYIWKRYVLTKFWFSLVSLIVLAFVFYASIHHSLHTIKGNTTSLASGASLKLSILYYLSQ 60 Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 I + P A+ TT L SM E+L++ +G S +L P++ + ++++ L+ Sbjct: 61 IALKAEFLIPQLVAVATTITLFSMQNKREVLLLQASGLSLKSLTAPLIHSSFIITLLLYA 120 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + + P C + L + + + D + + S TL +F + Sbjct: 121 NFQWLHPICEQISITKEHMDRGTLDKVHDKVPALYLKDQTVLLYSSIEQKTLTLNQVFWI 180 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + T A + +I +S+ + +F S Sbjct: 181 KNPKTIYTMEKLAFTTPSLPIGLDVIRFSETESGSIELSEYSDMKEFPEIEFGFYDNPFS 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRP------ELLETYRSEFHKRLTQWLFPVIFGLISI 290 I LS P N + + + S F+ L L + +IS Sbjct: 241 KIFTAGGKNRLSESFQAIPWNATGLGLSTTIPQRILSLLSTFYYMLISPLACISSMIISA 300 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 + + V + + + +F +F ++ P +L+ + Sbjct: 301 YLCLRFSRVPTVTLAYLVPLGTINTFFIFLKAGMVLSNSSVLPILPVMLFPLIILAIFTN 360 Query: 351 LLMIK 355 K Sbjct: 361 YAYAK 365 >gi|251798754|ref|YP_003013485.1| membrane protein-like protein [Paenibacillus sp. JDR-2] gi|247546380|gb|ACT03399.1| membrane protein-like protein [Paenibacillus sp. JDR-2] Length = 369 Score = 40.4 bits (92), Expect = 0.45, Method: Composition-based stats. Identities = 9/79 (11%), Positives = 20/79 (25%), Gaps = 6/79 (7%) Query: 282 PVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL 341 PV+ I + + I L F + + I Y Sbjct: 45 PVVLLWIGLHGLLAGRQGHGSGWWAGMMIILGFLFLGHNLEWFAWSFGDI------ISYA 98 Query: 342 FLFCISSIFLLMIKKKYTK 360 + I + +++ + Sbjct: 99 WPIIIILVGFNFLRRPRHR 117 >gi|145596809|ref|YP_001161106.1| hypothetical protein Strop_4300 [Salinispora tropica CNB-440] gi|145306146|gb|ABP56728.1| hypothetical protein Strop_4300 [Salinispora tropica CNB-440] Length = 644 Score = 40.4 bits (92), Expect = 0.46, Method: Composition-based stats. Identities = 11/82 (13%), Positives = 29/82 (35%) Query: 280 LFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL 339 + I G I ++ L R + +++I + + + I P L Sbjct: 416 IAAPILGTIGLLRPASAGLRRLGNAVVAAIFNIAIFGTGAAIYLFAVDLIMSTPTLPGWL 475 Query: 340 YLFLFCISSIFLLMIKKKYTKI 361 + L + + ++ + Y ++ Sbjct: 476 QVVLVWLCGVVGWLLLRPYRRV 497 >gi|111025470|ref|YP_707890.1| hypothetical protein RHA1_ro08688 [Rhodococcus jostii RHA1] gi|110824449|gb|ABG99732.1| hypothetical protein RHA1_ro08688 [Rhodococcus jostii RHA1] Length = 705 Score = 40.4 bits (92), Expect = 0.50, Method: Composition-based stats. Identities = 11/87 (12%), Positives = 30/87 (34%), Gaps = 1/87 (1%) Query: 275 RLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY 334 RL P+ L + A + R + ++ S+ ++ + + + N Sbjct: 391 RLAILFAPIWIPLAAAHAGTLMRVCRMIASAYMWGVAGSVIVALYL-LALVKLYVTDNGQ 449 Query: 335 YIPILYLFLFCISSIFLLMIKKKYTKI 361 L+ I ++ I + + ++ Sbjct: 450 IDGSWRLWFMVILTLVCWFIMRPFKRV 476 >gi|228474300|ref|ZP_04059035.1| conserved hypothetical protein [Staphylococcus hominis SK119] gi|228271659|gb|EEK13006.1| conserved hypothetical protein [Staphylococcus hominis SK119] Length = 372 Score = 40.0 bits (91), Expect = 0.57, Method: Composition-based stats. Identities = 27/261 (10%), Positives = 77/261 (29%), Gaps = 12/261 (4%) Query: 9 LRCIGRSFLMSCLF--IVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 + I F++ L + I+ I+IL I + +S +L ++L + ++ P Sbjct: 85 IWAIIVYFIICLLISFLALISMNIRILSGILFLIASIITLPLVLLF--------ITLIIP 136 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 F + + ++ + +T + + N E Sbjct: 137 IFFFITAIMMFARRSKIETVPAYGSTYDYPPYYNQRDDYDDRYYYEEEPTQYNDEEEYIE 196 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 S K ++ ++ S + D + Y I++ N D + + Sbjct: 197 SPRKTKKSERRIRRKPS--SDYNEREHDYEDYHHITQNNDEQDFNDDIEEDKYNQYPKRA 254 Query: 187 YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 ++ D + +L+ ++ + + + ++ + + Sbjct: 255 VKSEYQQSSNDDTSGVLSRQRKYKYKSKNSMPNEVNDDENNVEKDLYIDKKEQKAQRKRE 314 Query: 247 LSFLLNPNPNNPNYRPELLET 267 + L + ++ Sbjct: 315 KAELRAKKKEKRKAYNQRMKE 335 >gi|301162324|emb|CBW21869.1| putative anti-sigma factor [Bacteroides fragilis 638R] Length = 340 Score = 40.0 bits (91), Expect = 0.62, Method: Composition-based stats. Identities = 10/86 (11%), Positives = 20/86 (23%) Query: 224 KSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPV 283 + + +N +L + + + R KR L Sbjct: 41 DQLYYMLFVGERKVAMDGVDTENSLSVLKDRIKHKESEKKSVHRIRVSKWKRYAMPLAAF 100 Query: 284 IFGLISIVAADKRALVRQRKKIHPIF 309 + GL+ V A + Sbjct: 101 LCGLLVSVGALYWISSGKSAGYIFAT 126 >gi|253563357|ref|ZP_04840814.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|251947133|gb|EES87415.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] Length = 336 Score = 40.0 bits (91), Expect = 0.62, Method: Composition-based stats. Identities = 10/86 (11%), Positives = 20/86 (23%) Query: 224 KSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPV 283 + + +N +L + + + R KR L Sbjct: 37 DQLYYMLFVGERKVAMDGVDTENSLSVLKDRIKHKESEKKSVHRIRVSKWKRYAMPLAAF 96 Query: 284 IFGLISIVAADKRALVRQRKKIHPIF 309 + GL+ V A + Sbjct: 97 LCGLLVSVGALYWISSGKSAGYIFAT 122 >gi|53712616|ref|YP_098608.1| putative anti-sigma factor [Bacteroides fragilis YCH46] gi|265762757|ref|ZP_06091325.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|52215481|dbj|BAD48074.1| putative anti-sigma factor [Bacteroides fragilis YCH46] gi|263255365|gb|EEZ26711.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] Length = 336 Score = 40.0 bits (91), Expect = 0.62, Method: Composition-based stats. Identities = 10/86 (11%), Positives = 20/86 (23%) Query: 224 KSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPV 283 + + +N +L + + + R KR L Sbjct: 37 DQLYYMLFVGERKVAMDGVDTENSLSVLKDRIKHKESEKKSVHRIRVSKWKRYAMPLAAF 96 Query: 284 IFGLISIVAADKRALVRQRKKIHPIF 309 + GL+ V A + Sbjct: 97 LCGLLVSVGALYWISSGKSAGYIFAT 122 >gi|62185347|ref|YP_220132.1| hypothetical protein CAB734 [Chlamydophila abortus S26/3] gi|62148414|emb|CAH64181.1| conserved hypothetical membrane protein [Chlamydophila abortus S26/3] Length = 367 Score = 40.0 bits (91), Expect = 0.67, Method: Composition-based stats. Identities = 58/365 (15%), Positives = 116/365 (31%), Gaps = 10/365 (2%) Query: 1 MKSFELYILRCIGRSFL-MSCLFIVFIAWVIQILQRIN---LVSSSTESLNILLKISGYL 56 M ++ Y+L S + + L VF A + L I +S SL + + Sbjct: 1 MYIWKRYVLTKFWFSLVSLIVLAFVFYASIHHSLHTIKGNTTSLASGASLKLSILYYLAQ 60 Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 I + P A+ TT L SM E+L++ +G S +L P++ + ++++ L+ Sbjct: 61 IALKAEFLIPQLVAVATTITLFSMQNKREVLLLQASGLSLKSLTAPLIHSSFIITLLLYA 120 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + + P C + L + + D + + S TL +F + Sbjct: 121 NFQWLHPICEQISTTKEHIDRGTLDKVQDKVPALYLKDQTVLLYSSIEQKTLTLNQVFWI 180 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 + T A + +I +S+ + +F S Sbjct: 181 KNPKTIYTMEKLAFTTPSLPIGLDVIRFSATESGSMELSEYSDMKEFPEIEFGFYDNPFS 240 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRP------ELLETYRSEFHKRLTQWLFPVIFGLISI 290 I LS P N + + + S F+ L L + +IS Sbjct: 241 KIFTAGGKNRLSESFQAIPWNATGLGLSTTIPQRILSLLSTFYYMLISPLACISSMIISA 300 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 + + V + + + +F +F ++ P + + + Sbjct: 301 YLCLRFSRVPTVTLAYLVPLGTINTFFIFLKAGMVLANSSVLPILPVMFFPLIILAIITN 360 Query: 351 LLMIK 355 K Sbjct: 361 YAYAK 365 >gi|149193964|ref|ZP_01871062.1| hypothetical protein CMTB2_02728 [Caminibacter mediatlanticus TB-2] gi|149135917|gb|EDM24395.1| hypothetical protein CMTB2_02728 [Caminibacter mediatlanticus TB-2] Length = 323 Score = 39.6 bits (90), Expect = 0.69, Method: Composition-based stats. Identities = 38/174 (21%), Positives = 69/174 (39%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M+ +YIL FL I I +I I+ N+ S + LLK +P + Sbjct: 1 MRKISVYILNQFLPLFLTIFFVISAIISLIYIITISNITSKIQITFIELLKFYILSMPQI 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 L + F + N+ + ++ EL+ + + G TL+ P+L LAILL+ I Sbjct: 61 LLITLAISFFISAINLYSKLSETQELIALFSLGFKPKTLLNPILLLAILLTFINLFILFI 120 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF 174 P + L + + F++ + + D + N + T ++ Sbjct: 121 SIPYAKMNFNNLKNEKKQEAKFNFQSSQVSQQFGDWVIFANKGKNNSFTKIYLY 174 >gi|302342654|ref|YP_003807183.1| hypothetical protein Deba_1221 [Desulfarculus baarsii DSM 2075] gi|301639267|gb|ADK84589.1| protein of unknown function DUF107 [Desulfarculus baarsii DSM 2075] Length = 441 Score = 39.6 bits (90), Expect = 0.72, Method: Composition-based stats. Identities = 9/77 (11%), Positives = 27/77 (35%), Gaps = 2/77 (2%) Query: 278 QWLFPVIFGLISIVAADKRALVR-QRKKIHPIFISLSISFGVFWGFSYIIHKIEQN-PYY 335 + + LI++ ++ + + +L + FG F + +E + Sbjct: 290 LPVSSLGLALIALAVVLFIVEIKVTSFGLLSLAGALCLVFGSLMLFDFEGDFVELSLGVM 349 Query: 336 IPILYLFLFCISSIFLL 352 P++ + + + L Sbjct: 350 TPVVAAVIAFFAGVAYL 366 >gi|156744090|ref|YP_001434219.1| acriflavin resistance protein [Roseiflexus castenholzii DSM 13941] gi|156235418|gb|ABU60201.1| acriflavin resistance protein [Roseiflexus castenholzii DSM 13941] Length = 1171 Score = 39.6 bits (90), Expect = 0.74, Method: Composition-based stats. Identities = 20/136 (14%), Positives = 47/136 (34%), Gaps = 6/136 (4%) Query: 221 MKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRL-TQW 279 + +S T+ + + LN N + L +SE +RL + Sbjct: 854 IPTRSGTVPLSALGRIELASTPQTIRRYDKLNQVIIGANLQGRNLGEVQSELQQRLEAKG 913 Query: 280 LFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL 339 + P +++A+ + +Q + + +++ +S + P I + Sbjct: 914 IIPP-----TVIASFTGLVQQQTEGFESLLLAMLLSVIFVYMVLASQFGSFTQPLVIMVA 968 Query: 340 YLFLFCISSIFLLMIK 355 F F + + L +I Sbjct: 969 MPFSFIGAFLALRLIN 984 >gi|219684946|ref|ZP_03539887.1| conserved hypothetical integral membrane protein [Borrelia garinii PBr] gi|219671684|gb|EED28740.1| conserved hypothetical integral membrane protein [Borrelia garinii PBr] Length = 429 Score = 39.6 bits (90), Expect = 0.79, Method: Composition-based stats. Identities = 41/207 (19%), Positives = 81/207 (39%), Gaps = 5/207 (2%) Query: 1 MKSF----ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYL 56 MK E YI+ + FL++ LF F+ ++ QIL + ++ + Y Sbjct: 1 MKILKNSYESYIITEFFKYFLITFLFFFFVFFINQILFFMRILLQNYVPFLKAFIFIIYS 60 Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 +P V+ + PF + + N E+L + G S LI P L +++ FI Sbjct: 61 LPMVIALSPPFASLISVILTIHKFKINNEILAFRSIGISIFDLIFPFFKLGVVIVFISFI 120 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 S +I+ P ++ + + + L+ + DL + + N F Sbjct: 121 SNDILLPLGSIGRLKIFNEIKEEVPHLVLKPYSSKQYG-DLIFVSGEKSENGYKNVTFFD 179 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIIL 203 ++R +I+ A++ I + + Sbjct: 180 NTRLKGFDRIFMAKNLDIRKENFQVYF 206 Score = 36.9 bits (83), Expect = 5.5, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 38/108 (35%), Gaps = 1/108 (0%) Query: 251 LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFI 310 LN P + L + EF+++++ L + F ++ I I Sbjct: 321 LNFKPYQDKSMKQNLALFNLEFYQKISLPLSVLFFIFLAFSMGMYSNRKYSIILELVISI 380 Query: 311 SLSISF-GVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + + +F G + NP + IL + I+ L + K Sbjct: 381 IICVFYWVMFIGGKVYTVQYAPNPIIVTILPNLILIIAGAILFLRLLK 428 >gi|187918661|ref|YP_001884227.1| hypothetical membrane spanning protein [Borrelia hermsii DAH] gi|119861509|gb|AAX17304.1| hypothetical membrane spanning protein [Borrelia hermsii DAH] Length = 429 Score = 39.6 bits (90), Expect = 0.81, Method: Composition-based stats. Identities = 34/197 (17%), Positives = 77/197 (39%), Gaps = 1/197 (0%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 YI+ + FL++ LF F+ ++ QIL + ++ + Y +P V+ + P Sbjct: 11 YIITEFCKYFLITFLFFFFVFFINQILFFMRILLQNYVPFFKAFIFVIYSLPMVIALSPP 70 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 F + + N E+L + G S L+ P L +++++ FI + + P Sbjct: 71 FAALLSVILTIYRFKLNNEILAFRSIGISIFDLLVPFFKLGVVIALIAFILNDFLLPLGS 130 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 ++ + + + L+ + DL + + F ++R +I Sbjct: 131 IGRLKIFNEIKEEIPHLILKPYSSKQYG-DLIFVSGEKSDTGYRNVTFFDNTRLKGYDRI 189 Query: 187 YYAQSGSIDLDRQAIIL 203 + A+ +I + + Sbjct: 190 FMARELNIQKENYQVYF 206 Score = 36.9 bits (83), Expect = 5.2, Method: Composition-based stats. Identities = 15/110 (13%), Positives = 36/110 (32%), Gaps = 2/110 (1%) Query: 251 LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFI 310 LN +P + EF+++++ L + F ++ ++ I + I Sbjct: 321 LNYSPYEDLLAKRSYALFYLEFYQKISLPLSVLFFIFLA--FGMGMYSNKKYSIILELVI 378 Query: 311 SLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 S+ I + F Q ++ + L++ + K Sbjct: 379 SILICVFYWVMFIGGKVYTVQYAPNPFLVTVLPNVALIFAGLILFLRLLK 428 >gi|134097017|ref|YP_001102678.1| putative integral membrane protein [Saccharopolyspora erythraea NRRL 2338] gi|291006237|ref|ZP_06564210.1| putative integral membrane protein [Saccharopolyspora erythraea NRRL 2338] gi|133909640|emb|CAL99752.1| putative integral membrane protein [Saccharopolyspora erythraea NRRL 2338] Length = 568 Score = 39.6 bits (90), Expect = 0.83, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 30/86 (34%), Gaps = 2/86 (2%) Query: 276 LTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY 335 + LF I I A + R R ++ W S ++ +E Y Sbjct: 211 FSHPLFT-AMVGIGIGLASRTTNGRMRVLWPVFGFLAAVVLHAVWNASTLLGGVEFLNIY 269 Query: 336 IPILYLFLFCISSIFLLMIKKKYTKI 361 + + +F + +L +K+ +I Sbjct: 270 FLFM-VPIFFGTGWIVLWQRKREQRI 294 >gi|217322881|ref|YP_002327179.1| hypothetical protein ABBFA_003303 [Acinetobacter baumannii AB307-0294] gi|213986513|gb|ACJ56812.1| hypothetical protein ABBFA_003303 [Acinetobacter baumannii AB307-0294] Length = 71 Score = 39.6 bits (90), Expect = 0.87, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 30/69 (43%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y+++ + + L+ + I ++++ + + +IL I GY +P L Sbjct: 2 IIRRYLVKQVVSTSLVVIALLTLIMMGGRLIKYFGVAAQGRLDASILFSIIGYRLPEFLT 61 Query: 63 MVTPFCFAM 71 ++ P F + Sbjct: 62 LILPLGFLL 70 >gi|51599059|ref|YP_073247.1| hypothetical protein BG0833 [Borrelia garinii PBi] gi|51573630|gb|AAU07655.1| conserved hypothetical integral membrane protein [Borrelia garinii PBi] Length = 429 Score = 39.2 bits (89), Expect = 0.91, Method: Composition-based stats. Identities = 42/207 (20%), Positives = 81/207 (39%), Gaps = 5/207 (2%) Query: 1 MKSF----ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYL 56 MK E YI+ + FL++ LF F+ ++ QIL + ++ + Y Sbjct: 1 MKILKNSYESYIISEFFKYFLITFLFFFFVFFINQILFFMRILLQNYVPFLKAFIFIIYS 60 Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 +P V+ + PF + + N E+L + G S LI P L I++ FI Sbjct: 61 LPMVIALSPPFASLISVILTIHKFKINNEILAFRSIGISIFDLIFPFFKLGIVIVFISFI 120 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 S +I+ P ++ + + + L+ + DL + + N F Sbjct: 121 SNDILLPLGSIGRLKIFNEIKEEVPHLVLKPYSSKQYG-DLIFVSGEKSENGYKNVTFFD 179 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIIL 203 ++R +I+ A++ I + + Sbjct: 180 NTRLKGFDRIFMAKNLDIKKENFQVYF 206 Score = 36.5 bits (82), Expect = 6.2, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 38/108 (35%), Gaps = 1/108 (0%) Query: 251 LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFI 310 LN P + L + EF+++++ L + F ++ I I Sbjct: 321 LNFKPYQDKSMNQNLALFNLEFYQKISLPLSVLFFIFLAFSMGMYSNRKYSIILELVISI 380 Query: 311 SLSISF-GVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + + +F G + NP I IL + I+ L + K Sbjct: 381 IICVFYWVMFIGGKVYTVQYAPNPIIITILPNLILIIAGAILFLRLLK 428 >gi|195952581|ref|YP_002120871.1| permease-like [Hydrogenobaculum sp. Y04AAS1] gi|195932193|gb|ACG56893.1| permease-like [Hydrogenobaculum sp. Y04AAS1] Length = 353 Score = 39.2 bits (89), Expect = 0.92, Method: Composition-based stats. Identities = 47/347 (13%), Positives = 103/347 (29%), Gaps = 9/347 (2%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 +I + + + L I+ + ++ QI ++ +S IL + +P VL Sbjct: 2 LLRFITKRFLFTIFLVYLSILALFFIYQISNFF--ITYHMKSPKILFQTILNFLPIVLFY 59 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 ++ + + R L+ + G + KP + +++L+S + P Sbjct: 60 TATINVSISVFVLSHYLKRIKMFLVPQSFGIPISHIFKPFIIVSLLISFGNLMLNEFFIP 119 Query: 124 KCRS--TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 + K + ++ I + I Sbjct: 120 NATKELKYIEHVYKKNQKYELGIARNLWIAKEKNNEKTFIGTSLATSNGLFYNIKIINVK 179 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 Y ++ + + L G SP + + + + + Sbjct: 180 NNKFNYIIKAKKAIVKNGYMDLEQGIETSFSP--FREIHFQTLHLKTEINPKDLNLWIKT 237 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQ 301 ++Q+L+ L+ + Y S F +L P + I+ K Sbjct: 238 PDEQSLTELV-KTAIVMRKEGLNMFPYISTFIFKLEFSFLPFLMVCIASFYIAKSQNTID 296 Query: 302 RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 K SL V + KI NP + ++Y+F+ + Sbjct: 297 WYKAFLWHASLFGIGIV--IPYSLSSKINMNPLFFVVIYVFMSFYAL 341 >gi|301119303|ref|XP_002907379.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262105891|gb|EEY63943.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 822 Score = 39.2 bits (89), Expect = 0.94, Method: Composition-based stats. Identities = 33/331 (9%), Positives = 73/331 (22%), Gaps = 15/331 (4%) Query: 2 KSFELYILRCIGRSFLMSCLFIVF-IAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 K I + +S + + ++ L NL +S +L Sbjct: 107 KIVNR-IFEEVMILGFLSMVIFTLNTSGALKSLALNNLTASEQLHFYEFFHYIVFLTMIY 165 Query: 61 LPMVTPFCFAMETTNVLTSMNR----NTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 ++ + T + I + P + Sbjct: 166 FIVIVLLLLFIGTVVPKLVWEIKNQPDQSRESISDIHDDTYDPQYPSFISSDRDDCGGSR 225 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + S++ + +F E DD YI + ++ G Sbjct: 226 RMRHSFIRDASSLARDLNPYSSGSSFMDDGERTLDTPSDDYYIAMRAQLRSDADVGNRTT 285 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSS 236 +R + +G + + F+ S Sbjct: 286 TTRARAPSGMDLVMGSRAYSLLLQRYQREGWCFHFNIRRQWSLWKSFEILAYNICQNRSG 345 Query: 237 TIVLKANDQNLSFLLNPNPNNPNYRPELLETYRS------EFHKRLTQWLFPVIFGLISI 290 I + F + P + Y +H +I +I + Sbjct: 346 YIYKNPAEMERLFGVRPT-QDEQENRMTYAKYHVLCMRNLLYHMTNIHPSGFLILLVICL 404 Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWG 321 + + + SL + V + Sbjct: 405 LPSIFPDQDH--WIFIGVGGSLLLVNVVIFL 433 >gi|89071066|ref|ZP_01158277.1| Predicted permease [Oceanicola granulosus HTCC2516] gi|89043397|gb|EAR49616.1| Predicted permease [Oceanicola granulosus HTCC2516] Length = 108 Score = 39.2 bits (89), Expect = 0.94, Method: Composition-based stats. Identities = 13/95 (13%), Positives = 31/95 (32%), Gaps = 2/95 (2%) Query: 196 LDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSF--LLNP 253 +++ DG + + +F +T S + ++N+ LL Sbjct: 14 EGGPQLVMVDGLAQTLRGSDQRLYTTRFNDFTYDIGRLIVSEEPGRLRERNVWSGPLLQA 73 Query: 254 NPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLI 288 + R+E H R+ + L + ++ Sbjct: 74 SSALQAQIERPAVALRAEVHDRMNKALLGFVGPVL 108 >gi|296004798|ref|XP_002808751.1| conserved Plasmodium membrane protein, unknown function [Plasmodium falciparum 3D7] gi|225632135|emb|CAX64024.1| conserved Plasmodium membrane protein, unknown function [Plasmodium falciparum 3D7] Length = 3559 Score = 39.2 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 27/284 (9%), Positives = 58/284 (20%), Gaps = 20/284 (7%) Query: 2 KSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 ++ + F S L FI + + I ++S+ ++ L + V+ Sbjct: 341 NIIHMFNFFDVFMIFSFSILAFFFIFICLNSISFI--ITSTILFVSSLCTYFLHKYSNVI 398 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 ++ + + N S + A L + Sbjct: 399 IVIFQTITLLANCIMSYIYFYNISKKGTLYEIKSDHISTNYNIKNAHTLQGNSQTGSTYL 458 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLE----------------ENLFFRLDDDLYIKISKYN 165 I L L F + + K Sbjct: 459 YTYEDKIILFYMIFISLFLIFHLMYILFIFLSKENNFTKLFTERKVYYYNIYPYYEKKNV 518 Query: 166 PNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKS 225 + I + +D I N ++ K + Sbjct: 519 KPKQHRTNNGDHFNQKDNELIIKYDKYVLCVDDDKRITNAYRIYSKQIDINIKKYTYNEL 578 Query: 226 YTLQTESANSSTIVLKANDQNLSF--LLNPNPNNPNYRPELLET 267 + + ++ LL N Y + Sbjct: 579 HMFKHILLSAVIKYKHTQKVYTKQELLLKRKANKQIYEQKYYNE 622 >gi|159898811|ref|YP_001545058.1| hypothetical protein Haur_2290 [Herpetosiphon aurantiacus ATCC 23779] gi|159891850|gb|ABX04930.1| hypothetical protein Haur_2290 [Herpetosiphon aurantiacus ATCC 23779] Length = 726 Score = 39.2 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 16/173 (9%), Positives = 35/173 (20%), Gaps = 8/173 (4%) Query: 52 ISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLS 111 +P L P N + TS I + L +L Sbjct: 431 YVLLNVPRALNSAAPAS--------NIWHWENESWQSGVLSTTSSIKWHRSGQQLFTVLL 482 Query: 112 IFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQ 171 + + + + + + Sbjct: 483 PLQSNLPITGVVEFDGETLTQRLAINSLSPYEEQVFVHHNEFYLLIIAPWQWVDFLHIYK 542 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFK 224 I + ++ + DG+++R + I I +F Sbjct: 543 WDGIYWQSLPTQSLAKIDHYFAAWNNQLYMANTDGQLYRFDQAMQPIQIAQFD 595 >gi|303327959|ref|ZP_07358398.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3] gi|302861785|gb|EFL84720.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3] Length = 811 Score = 39.2 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 27/75 (36%), Gaps = 6/75 (8%) Query: 289 SIVAADKRALVRQRKKIHPIFISLSISFGVF-WGFSYIIHKIEQNPYYIPILYLFLFCIS 347 + + K IF + S+ V F+YI + + ++ P+ L LF Sbjct: 640 AAASGTPPKASFDFAKGAGIFAAFSVGISVVSAAFAYIANSVFSLGWWWPVALLILFACI 699 Query: 348 -----SIFLLMIKKK 357 + ++++ Sbjct: 700 SGPSMLLAWFKLRRR 714 >gi|320451385|ref|YP_004203481.1| diguanylate cyclase/phosphodiesterase domain 1 [Thermus scotoductus SA-01] gi|320151554|gb|ADW22932.1| diguanylate cyclase/phosphodiesterase domain 1 [Thermus scotoductus SA-01] Length = 358 Score = 39.2 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 25/87 (28%), Gaps = 6/87 (6%) Query: 275 RLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY 334 R + F L++I+ + ++ + G I NP Sbjct: 59 RFLLPFLALGFSLLAIILWRFPRTS-----SWVLPLAHLLVVGYLLTTLAYQLLIRPNPM 113 Query: 335 -YIPILYLFLFCISSIFLLMIKKKYTK 360 P Y F S FL ++ + Sbjct: 114 GLSPAAYWVPFVYFSSFLFFQTRQAVR 140 >gi|159901328|ref|YP_001547575.1| hypothetical protein Haur_4817 [Herpetosiphon aurantiacus ATCC 23779] gi|159894367|gb|ABX07447.1| hypothetical protein Haur_4817 [Herpetosiphon aurantiacus ATCC 23779] Length = 267 Score = 38.8 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 14/114 (12%), Positives = 33/114 (28%) Query: 247 LSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIH 306 L + + Y++ + + L+ ++A KR + + Sbjct: 154 TESLFQVLSYADEPSSQDMNNYQAVIAILYGIPICAGLGMLMGMLAYFKRRNLWGVLNLI 213 Query: 307 PIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 I+ S + G E + +F + +I+KK + Sbjct: 214 IAIIAFGCSGIIVLGAVASNVTNEMGSGLWLMFLSSIFLFVTSIAFLIRKKQPR 267 >gi|149022257|gb|EDL79151.1| cholinergic receptor, nicotinic, alpha polypeptide 1 (muscle), isoform CRA_a [Rattus norvegicus] Length = 438 Score = 38.8 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 26/207 (12%), Positives = 60/207 (28%), Gaps = 5/207 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWV-IQILQRINLVSSSTESLNILLKISGYLIPT 59 M+ LY + + L+ + ++ +++ L S SL + L + LIP+ Sbjct: 227 MQRLPLYFIVNVIIPCLLFSFLTSLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPS 286 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILL----SIFLF 115 V M T V + +++I+ S T I P + + +I F Sbjct: 287 TSSAVPLIGKYMLFTMVFVIASIIITVIVINTHHRSPSTHIMPEWVRKVFIDTIPNIMFF 346 Query: 116 ISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI 175 + + ++ + F + ++ + Sbjct: 347 STMKRPSRDKQEKRIFTEDIDISDISGKPGPPPMGFHSPLIKHPEVKSAIEGVKYIAETM 406 Query: 176 VDSRDTQTHKIYYAQSGSIDLDRQAII 202 +++ S + I Sbjct: 407 KSDQESNNGSDVLCWHTSTHKTEHSYI 433 >gi|46127869|ref|XP_388488.1| hypothetical protein FG08312.1 [Gibberella zeae PH-1] Length = 1517 Score = 38.8 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 18/195 (9%), Positives = 48/195 (24%), Gaps = 7/195 (3%) Query: 4 FELYIL----RCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPT 59 LY + R G F + V + + I + I S S + I + Sbjct: 622 LTLYFMTNLKREPGAFFFFILMSFVVVLVMSMIFRTIASASRSLFQALVPAAILILDLVI 681 Query: 60 VLPMVTPFCFAMETT---NVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 V P + + + + E ++++ + + + + Sbjct: 682 FTGFVIPKRYMLGWCKWLYYIDPIAYAFEAVVVNEFHNRDYECDQFIPNPGVTGYADVPS 741 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 + + + A + +R + I + + Sbjct: 742 DSRVCSAVGAQPGRSAVNGDRYAEMQFGYKWENRWRNFGIVIAWIVLFTITYMTAAELVS 801 Query: 177 DSRDTQTHKIYYAQS 191 + + +Y Sbjct: 802 EKKSKGEVLVYRRGH 816 >gi|228931444|ref|ZP_04094369.1| hypothetical protein bthur0010_60840 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228828250|gb|EEM73960.1| hypothetical protein bthur0010_60840 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 832 Score = 38.8 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 30/82 (36%), Gaps = 1/82 (1%) Query: 276 LTQWLFPVIFGLISIVAADKRALVRQ-RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY 334 + L + LI++V A R + + + ++I F + F Sbjct: 327 IIVALMSPVMLLIALVPAWTGTAKRFLSELFRTLLMKVAIGFLITLMFWVSSILFSATDK 386 Query: 335 YIPILYLFLFCISSIFLLMIKK 356 Y ++ L +S + + + +K Sbjct: 387 YGYLVVAALQVLSFLGVWLYRK 408 >gi|148658388|ref|YP_001278593.1| acriflavin resistance protein [Roseiflexus sp. RS-1] gi|148570498|gb|ABQ92643.1| acriflavin resistance protein [Roseiflexus sp. RS-1] Length = 1177 Score = 38.8 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 20/136 (14%), Positives = 44/136 (32%), Gaps = 6/136 (4%) Query: 221 MKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRL-TQW 279 + +S + S + + LN N + L ++E +RL + Sbjct: 854 IPTRSGAVPLTSLGTIELASTPQTIRRYNKLNQVIIGANLQGRNLGEVQAELQQRLDAKG 913 Query: 280 LFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL 339 L P ++ A +Q + + +++ +S + P I + Sbjct: 914 LIPP-----TVFAEFTGLAQQQTEGFESLLLAMLLSVIFVYMVLASQFGSFTQPLVIMVA 968 Query: 340 YLFLFCISSIFLLMIK 355 F F + + L +I Sbjct: 969 MPFSFIGAFLALRLIN 984 >gi|301766260|ref|XP_002918550.1| PREDICTED: solute carrier organic anion transporter family member 5A1-like isoform 2 [Ailuropoda melanoleuca] Length = 800 Score = 38.8 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 16/152 (10%), Positives = 38/152 (25%), Gaps = 3/152 (1%) Query: 11 CIGRSFLMSCLFIVFIAWVIQ---ILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 FL+ + FI Q I+ + V + ++ +P F Sbjct: 594 NTLIPFLIFLFIVTFITACAQPSAIIVTLRSVEDEERPFALGMQFVLLRTLAYIPTPIYF 653 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 ++TT +L + + TS + + + Sbjct: 654 GAVIDTTCMLWQQECGVQGSCWEYNVTSFRFVYFGLAAGLKFVGFIFIFLAWYSIKYKED 713 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYI 159 +++ + T S + + Sbjct: 714 ELQRQRWREFPLSTVSEMVGHTDNADKYARTR 745 >gi|203284703|ref|YP_002222443.1| hypothetical protein BDU_815 [Borrelia duttonii Ly] gi|201084146|gb|ACH93737.1| conserved hypothetical integral membrane protein [Borrelia duttonii Ly] Length = 429 Score = 38.8 bits (88), Expect = 1.5, Method: Composition-based stats. Identities = 34/197 (17%), Positives = 77/197 (39%), Gaps = 1/197 (0%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 YI+ + F ++ LF +F+ ++ QIL + ++ + Y +P V+ + P Sbjct: 11 YIITEFCKYFFITFLFFLFVFFINQILFFMRILLQNYVPFFKAFIFVIYSLPMVVALSPP 70 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 F + + N E+L + G S L+ P L L +++++ FI + + P Sbjct: 71 FAALLSVILTIYRFKLNNEILAFRSIGISISNLLTPFLKLGVIIALVSFILNDFLLPLGS 130 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 ++ + + L+ + DL + + F ++R +I Sbjct: 131 IGRLKIFNDIKEEIPHLILKPYSSKQYG-DLIFVSGEKSETGYKNVTFFDNTRLKGYDRI 189 Query: 187 YYAQSGSIDLDRQAIIL 203 + A+ +I + + Sbjct: 190 FMAKELNIQKENHQVYF 206 Score = 36.1 bits (81), Expect = 7.6, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 37/109 (33%), Gaps = 2/109 (1%) Query: 252 NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFIS 311 N P + EF+++++ L + F ++ ++ I + IS Sbjct: 322 NYAPYEDLIANRSYAFFYLEFYQKISLPLSVLFFIFLA--FGMGMYSNKKYSIILELVIS 379 Query: 312 LSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + I + F Q+ ++ + + + L++ + K Sbjct: 380 ILICVFYWAMFMGGKVYTVQHAPNPILVIILPNILLMVAGLILFLRLLK 428 >gi|119490837|ref|XP_001263115.1| ATP-binding cassette transporter [Neosartorya fischeri NRRL 181] gi|119411275|gb|EAW21218.1| ATP-binding cassette transporter [Neosartorya fischeri NRRL 181] Length = 1482 Score = 38.8 bits (88), Expect = 1.5, Method: Composition-based stats. Identities = 10/169 (5%), Positives = 39/169 (23%), Gaps = 2/169 (1%) Query: 15 SFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETT 74 F + + + + + + I +S + + + I + V P + + Sbjct: 620 FFFYLLVVFLIVLAMSGVFRFIGALSRTEQQAMVPASILMLALLVFTGFVAPIRYMLSWC 679 Query: 75 NVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSA 134 + N + + I + + + Sbjct: 680 RWI--NYLNPVAYGYEALMVNEYHARNFTCLSYIPSYGTAGTTTVACDAVGAVPGQSYVN 737 Query: 135 KAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + +R + + + + L ++ + Sbjct: 738 GDVYINSAYSYYHSHKWRNVGIIVVMVIFNHIVYFLASEYVTAKKSKGE 786 >gi|294868464|ref|XP_002765551.1| ribosomal protein S9, putative [Perkinsus marinus ATCC 50983] gi|239865594|gb|EEQ98268.1| ribosomal protein S9, putative [Perkinsus marinus ATCC 50983] Length = 530 Score = 38.4 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 6/87 (6%), Positives = 25/87 (28%), Gaps = 3/87 (3%) Query: 277 TQWLFPVIFGLISIVA---ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP 333 + + +I +++ A K I + ++ + Sbjct: 290 SSPILILIIVALTLFFTFGALMALRAPAGSKWRAIILPKMGIIFCSLLVWFVFTGSDVYT 349 Query: 334 YYIPILYLFLFCISSIFLLMIKKKYTK 360 I + + ++++L ++ + Sbjct: 350 VLILCIPVAGPMFAALWLWYRDRRQKR 376 >gi|203288235|ref|YP_002223250.1| hypothetical protein BRE_818 [Borrelia recurrentis A1] gi|201085455|gb|ACH95029.1| conserved hypothetical integral membrane protein [Borrelia recurrentis A1] Length = 429 Score = 38.4 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 35/197 (17%), Positives = 78/197 (39%), Gaps = 1/197 (0%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 YI+ + F ++ LF +F+ ++ QIL + ++ + S Y +P V+ + P Sbjct: 11 YIITEFCKYFFITFLFFLFVFFINQILFFMRILLQNYVSFFKAFIFVIYSLPMVVALSPP 70 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 F + + N E+L + G S L+ P L L +++++ FI + + P Sbjct: 71 FAALLSVILTIYRFKLNNEILAFRSIGISISNLLTPFLKLGVIIALVSFILNDFLLPLGS 130 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 ++ + + L+ + DL + + F ++R +I Sbjct: 131 IGRLKIFNDIKEEIPHLILKPYSSKQYG-DLIFVSGEKSETGYKNVTFFDNTRLKGYDRI 189 Query: 187 YYAQSGSIDLDRQAIIL 203 + A+ +I + + Sbjct: 190 FMAKELNIQKENHQVYF 206 Score = 36.1 bits (81), Expect = 8.1, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 37/109 (33%), Gaps = 2/109 (1%) Query: 252 NPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFIS 311 N P + EF+++++ L + F ++ ++ I + IS Sbjct: 322 NYAPYEDLIANRSYAFFYLEFYQKISLPLSVLFFIFLA--FGMGMYSNKKYSIILELVIS 379 Query: 312 LSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 + I + F Q+ ++ + + + L++ + K Sbjct: 380 ILICVFYWAMFMGGKVYTVQHAPNPILVIILPNILLMVAGLILFLRLLK 428 >gi|238061457|ref|ZP_04606166.1| hypothetical protein MCAG_02423 [Micromonospora sp. ATCC 39149] gi|237883268|gb|EEP72096.1| hypothetical protein MCAG_02423 [Micromonospora sp. ATCC 39149] Length = 653 Score = 38.4 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 11/89 (12%), Positives = 31/89 (34%), Gaps = 3/89 (3%) Query: 276 LTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFIS---LSISFGVFWGFSYIIHKIEQN 332 L + ++ V + A R+ + + + ++I + + + I Sbjct: 409 LIFRWAVIAAPILGTVGLMRPASAGLRRLANAVVAAVFNIAIFGTGAAIYLFAVDLIMST 468 Query: 333 PYYIPILYLFLFCISSIFLLMIKKKYTKI 361 P L + L + + ++ + Y +I Sbjct: 469 PTLPGWLQVVLVWLCGVVGWLLLRPYRRI 497 >gi|218249949|ref|YP_002375305.1| hypothetical protein BbuZS7_0837 [Borrelia burgdorferi ZS7] gi|226321272|ref|ZP_03796800.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi Bol26] gi|218165137|gb|ACK75198.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi ZS7] gi|226233304|gb|EEH32055.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi Bol26] Length = 429 Score = 38.4 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 70/178 (39%), Gaps = 4/178 (2%) Query: 1 MKSF----ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYL 56 MK E YI+ + FL++ LF F+ ++ QIL + ++ + Y Sbjct: 1 MKILKNSYESYIIAEFFKYFLITFLFFFFVFFINQILFFMRILLQNYVPFFKAFIFIIYS 60 Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 +P V+ + PF + + + E+L + G S LI P L I+++ FI Sbjct: 61 LPMVIALSPPFASLISVILTIHKFKLHNEILAFRSIGISIFDLIVPFFKLGIVIAFVSFI 120 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF 174 S +I+ P ++ + + + L+ + D +++ K F Sbjct: 121 SNDILLPLGSIGRLKIFNEIKEEVPHLVLKPYSSKQYGDLIFVSGEKSENGYKNVTFF 178 Score = 36.5 bits (82), Expect = 6.9, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 38/110 (34%), Gaps = 2/110 (1%) Query: 251 LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFI 310 LN P + L + EF+++++ L + F ++ R+ I + I Sbjct: 321 LNFKPYQDRSMKQNLALFNLEFYQKISLPLSVLFFIFLAFSMGMYS--NRKYSIILELVI 378 Query: 311 SLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 S+ + + F Q I+ + I I ++ + K Sbjct: 379 SIIVCVFYWVMFIGGKVYTVQYAPSPIIVTILPNLILIIAGAILFLRLLK 428 >gi|15595152|ref|NP_212941.1| hypothetical protein BB0807 [Borrelia burgdorferi B31] gi|221217627|ref|ZP_03589096.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi 72a] gi|225551663|ref|ZP_03772607.1| conserved hypothetical integral membrane protein [Borrelia sp. SV1] gi|226320854|ref|ZP_03796406.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi 29805] gi|2688742|gb|AAC67148.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi B31] gi|221192573|gb|EEE18791.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi 72a] gi|225371690|gb|EEH01116.1| conserved hypothetical integral membrane protein [Borrelia sp. SV1] gi|226233720|gb|EEH32449.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi 29805] Length = 429 Score = 38.4 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 70/178 (39%), Gaps = 4/178 (2%) Query: 1 MKSF----ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYL 56 MK E YI+ + FL++ LF F+ ++ QIL + ++ + Y Sbjct: 1 MKILKNSYESYIIAEFFKYFLITFLFFFFVFFINQILFFMRILLQNYVPFFKAFIFIIYS 60 Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 +P V+ + PF + + + E+L + G S L+ P L I+++ FI Sbjct: 61 LPMVIALSPPFASLISVILTIHKFKLHNEILAFRSIGISIFDLLVPFFKLGIVIAFVSFI 120 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF 174 S +I+ P ++ + + + L+ + D +++ K F Sbjct: 121 SNDILLPLGSIGRLKIFNEIKEEVPHLVLKPYSSKQYGDLIFVSGEKSENGYKNVTFF 178 Score = 36.5 bits (82), Expect = 6.6, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 38/110 (34%), Gaps = 2/110 (1%) Query: 251 LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFI 310 LN P + L + EF+++++ L + F ++ R+ I + I Sbjct: 321 LNFKPYQDRSMKQNLALFNLEFYQKISLPLSVLFFIFLAFSMGMYS--NRKYSIILELVI 378 Query: 311 SLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 S+ + + F Q I+ + I I ++ + K Sbjct: 379 SIIVCVFYWVMFIGGKVYTVQYAPSPIIVTILPNLILIIAGAILFLRLLK 428 >gi|168204628|ref|ZP_02630633.1| hypothetical protein AC3_0845 [Clostridium perfringens E str. JGS1987] gi|170663786|gb|EDT16469.1| hypothetical protein AC3_0845 [Clostridium perfringens E str. JGS1987] Length = 721 Score = 38.4 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 38/345 (11%), Positives = 94/345 (27%), Gaps = 17/345 (4%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y + + + VFI ++ ++ ++ V S + P + ++ Sbjct: 16 YFSKSNFIIYGFRLVGWVFIKFLGFLVDKLEDVVKSVTVVTDFF-----NSPEITNLINK 70 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI-----SENII 121 F + V + + +L+I S++ + + I++ + +I Sbjct: 71 FSPLLYLLLVASIIFIGYQLVINKKFDRSKLPMNIILALCIIVVMPLAMSKANILTNKVI 130 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF--IVDSR 179 + + L++ F DD I N I + Sbjct: 131 GEIQGESQFSDQIISNNVTDLYLLDQANFPIKDDGTVGDIDPKNNVGNNITKINPIEEID 190 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + ++ I + LN K + + + + I Sbjct: 191 RDKVNNKKVFENEIIFDSKGEAKLNKIVGLFKWDDEYYRYHINYMTIIVTLLITAFVMIF 250 Query: 240 LKANDQNLSFLLNPNP----NNPNYRPELLETYRSEFHKRLTQWLFPVI-FGLISIVAAD 294 LS L + + R + ++ ++ + ++ + Sbjct: 251 TSVKMIKLSIELAFSKVMTTFVAVADLSNGQRMRQSVNGIISIFVAMISTMLMLKLYILG 310 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL 339 L + I I L + V G +YI + + Sbjct: 311 TAYLSDKISGIGTICAMLGCAIFVIDGPNYIEKMFGVDAGLSSVW 355 >gi|110003954|emb|CAK98294.1| hypothetical transmembrane protein [Spiroplasma citri] Length = 990 Score = 38.4 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 23/274 (8%), Positives = 75/274 (27%), Gaps = 20/274 (7%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y+ I +++ V + + + +++ V +K+ + + Sbjct: 60 YLTGDIWGYTIIALTIFVALLVITLVSVQLHRVKKGQLIAKPYIKMIFVTLIIAALIYGK 119 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 + + + + +S + F+ I ++ + +E + Sbjct: 120 VAVLILAALMF---------IGLLFIESSLFDVEFLQNFVEERNMIVIYHQDKKLEREVN 170 Query: 127 ST-IKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHK 185 S + T + + E ++D + ++ F + + Sbjct: 171 KEGKYHGSVTLGVDATIAGIGETERNFKNNDYVREDDSKKLSHQKSNSFFLSNELNNL-- 228 Query: 186 IYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA--- 242 + + +D A ++N+ +P + K + + S + Sbjct: 229 -FNSDKNDVDEHELANLINNMTQTMTNPPKPAVFETKLNTTETNLKQNESKELSKPPVVN 287 Query: 243 ----NDQNLSFLLNPNPNNPNYRPELLETYRSEF 272 + + L N + + +E Sbjct: 288 EVEQQETSKLELEQLEEQNSSNDEDSQGETVAEI 321 >gi|216264700|ref|ZP_03436692.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi 156a] gi|223889298|ref|ZP_03623885.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi 64b] gi|224533066|ref|ZP_03673671.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi WI91-23] gi|225549397|ref|ZP_03770369.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi 94a] gi|225550295|ref|ZP_03771254.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi 118a] gi|215981173|gb|EEC21980.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi 156a] gi|223885219|gb|EEF56322.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi 64b] gi|224512002|gb|EEF82398.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi WI91-23] gi|225369163|gb|EEG98617.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi 118a] gi|225370025|gb|EEG99466.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi 94a] gi|312147984|gb|ADQ30643.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi JD1] gi|312149484|gb|ADQ29555.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi N40] Length = 429 Score = 38.4 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 70/178 (39%), Gaps = 4/178 (2%) Query: 1 MKSF----ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYL 56 MK E YI+ + FL++ LF F+ ++ QIL + ++ + Y Sbjct: 1 MKILKNSYESYIIAEFFKYFLITFLFFFFVFFINQILFFMRILLQNYVPFFKAFIFIIYS 60 Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 +P V+ + PF + + + E+L + G S L+ P L I+++ FI Sbjct: 61 LPMVIALSPPFASLISVILTIHKFKLHNEILAFRSIGISIFDLLVPFFKLGIVIAFVSFI 120 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF 174 S +I+ P ++ + + + L+ + D +++ K F Sbjct: 121 SNDILLPLGSIGRLKIFNEIKEEVPHLVLKPYSSKQYGDLIFVSGEKSENGYKNVTFF 178 Score = 36.1 bits (81), Expect = 7.4, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 38/110 (34%), Gaps = 2/110 (1%) Query: 251 LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFI 310 LN P + L + EF+++++ L + F ++ R+ I + I Sbjct: 321 LNFKPYQDRSMKQNLALFNLEFYQKISLPLSVLFFIFLAFSMGMYS--NRKYSIILELVI 378 Query: 311 SLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 S+ + + F Q I+ + I I ++ + K Sbjct: 379 SIIVCVFYWVMFIGGKVYTVQYAPSPIIVTILPNLILIIAGAILFLRLLK 428 >gi|195941983|ref|ZP_03087365.1| hypothetical protein Bbur8_03799 [Borrelia burgdorferi 80a] Length = 429 Score = 38.4 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 70/178 (39%), Gaps = 4/178 (2%) Query: 1 MKSF----ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYL 56 MK E YI+ + FL++ LF F+ ++ QIL + ++ + Y Sbjct: 1 MKILKNSYESYIIAEFFKYFLITFLFFFFVFFINQILFFMRILLQNYVPFFKAFIFIIYS 60 Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 +P V+ + PF + + + E+L + G S L+ P L I+++ FI Sbjct: 61 LPMVIALSPPFASLISVILTIHKFKLHNEILAFRSIGISIFDLLVPFFKLGIVIAFVSFI 120 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF 174 S +I+ P ++ + + + L+ + D +++ K F Sbjct: 121 SNDILLPLGSIGRLKIFNEIKEEVPHLVLKPYSSKQYGDLIFVSGEKSENGYKNVTFF 178 Score = 36.5 bits (82), Expect = 7.2, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 38/108 (35%), Gaps = 1/108 (0%) Query: 251 LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFI 310 LN P + L + EF+++++ L + F ++ I I Sbjct: 321 LNFKPYQDRSMKQNLALFNLEFYQKISLPLSVLFFIFLAFSMGMYSNRKYSIILELVISI 380 Query: 311 SLSISF-GVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + + +F G + NP + IL + I+ L + K Sbjct: 381 IVCVFYWVMFIGGKVYTVQYAPNPIIVTILPNLILIIAGAILFLRLLK 428 >gi|269986885|gb|EEZ93162.1| hypothetical protein BJBARM4_0254 [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 744 Score = 38.4 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 27/73 (36%), Gaps = 2/73 (2%) Query: 280 LFPVIFGLIS--IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP 337 + P +FG+I+ I A +R + L I F + NP + Sbjct: 162 ILPFVFGMIAVLIFAVLLIKGIRNSRNTAVRVALLFIVFLMITLLIPGFAGFLFNPIVLT 221 Query: 338 ILYLFLFCISSIF 350 +++ + + I+ Sbjct: 222 AIFVAIILAAVIY 234 >gi|222086411|ref|YP_002544945.1| acriflavin resistance (multidrug efflux transporter) protein [Agrobacterium radiobacter K84] gi|221723859|gb|ACM27015.1| acriflavin resistance (multidrug efflux transporter) protein [Agrobacterium radiobacter K84] Length = 1054 Score = 38.4 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 23/79 (29%) Query: 270 SEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI 329 E KR+ L P LI + A + F + I + F ++ + Sbjct: 832 VEEVKRIAAPLLPPGARLIPLAEAATLQENSSGMALTFGFAIIIIFLVLAAQFESVLSSL 891 Query: 330 EQNPYYIPILYLFLFCISS 348 L +F + Sbjct: 892 IIMSTVPLGLACAIFALVI 910 >gi|60680827|ref|YP_210971.1| putative anti-sigma factor [Bacteroides fragilis NCTC 9343] gi|60492261|emb|CAH07026.1| putative anti-sigma factor [Bacteroides fragilis NCTC 9343] Length = 340 Score = 38.4 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 9/86 (10%), Positives = 19/86 (22%) Query: 224 KSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPV 283 + + +N +L + + + KR L Sbjct: 41 DQLYYMLFVGERKVAMDGVDTENSLSVLKDRIKHKESEKKSVHRIHVSKWKRYAMPLAAF 100 Query: 284 IFGLISIVAADKRALVRQRKKIHPIF 309 + GL+ V A + Sbjct: 101 LCGLLVSVGALYWISSGKSAGYIFAT 126 >gi|124513908|ref|XP_001350310.1| conserved Plasmodium membrane protein, unknown function [Plasmodium falciparum 3D7] gi|23615727|emb|CAD52719.1| conserved Plasmodium membrane protein, unknown function [Plasmodium falciparum 3D7] Length = 2126 Score = 38.4 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 20/156 (12%), Positives = 45/156 (28%), Gaps = 5/156 (3%) Query: 204 NDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRP- 262 + R + + ++ + S ++ + + L +YR Sbjct: 339 KNENHVRIDKNNVNDNMKELHSNSMGYIDIRKKRKKELSKELKNMDWLIYTIRYMDYRRL 398 Query: 263 -ELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSI---SFGV 318 R K++ + LIS + + I SL + + Sbjct: 399 RRRFSGIRKPISKKIVFIITIFCLILISWKYFNISYENNKFSFSFEIQTSLLFFVEAILL 458 Query: 319 FWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMI 354 G + + PI ++F I ++ LL+ Sbjct: 459 TIGIIIFAKFQTRLSLHWPIYASYIFIICAVILLLF 494 >gi|163788476|ref|ZP_02182922.1| hypothetical protein FBALC1_08843 [Flavobacteriales bacterium ALC-1] gi|159876796|gb|EDP70854.1| hypothetical protein FBALC1_08843 [Flavobacteriales bacterium ALC-1] Length = 1188 Score = 38.1 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 31/289 (10%), Positives = 77/289 (26%), Gaps = 7/289 (2%) Query: 5 ELYILRCIGRSFLMSCLFIVFIAW---VIQILQRINLVSSSTESLNILLKISGYLIPTVL 61 Y FLMS L + + ++ ++ L+ L ++ + Sbjct: 94 HQYFWSQFIGVFLMSSLAFSMFLVGFGITTLFPNLDPELVNSFQLSHYLWSILIIVLPNI 153 Query: 62 PMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENII 121 + T F++ + + +LI I L PV+ + +S + + Sbjct: 154 FICTSIIFSVSILSKNNVATYVSAILIYVLYFLCSIFLNSPVMAQSTPVSADSYALAALF 213 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 +P S + + + + + + + + +F Sbjct: 214 DPFALSAMFEQTQFWTTFQKNTMSLSFSGHFMWNRILWISLSFVVLLVSYKLFSFRKSQQ 273 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + K+ Q+ +I+ + + + ++ K+ + Sbjct: 274 KIKKVIKIQNENIEAYAYQAVKVNITNKSHKNAFFSLLRLELKNVFKSLPFIGVLILWAV 333 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISI 290 + +N N E T L + LI Sbjct: 334 IVFIEILSRINEGGAY-NDSLYPATNLLLEL---FTMPLTALSLILIVF 378 >gi|212716032|ref|ZP_03324160.1| hypothetical protein BIFCAT_00944 [Bifidobacterium catenulatum DSM 16992] gi|212661399|gb|EEB21974.1| hypothetical protein BIFCAT_00944 [Bifidobacterium catenulatum DSM 16992] Length = 481 Score = 38.1 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 11/77 (14%), Positives = 28/77 (36%) Query: 280 LFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL 339 L + +I + + R+ + I + L++ F+ I Q+ + +L Sbjct: 21 LLAAVMFVIGLHLMNSPKTARKGNMVSAIGMILAVVMAFIVLFAGEISNGFQHGVAVVLL 80 Query: 340 YLFLFCISSIFLLMIKK 356 + + ++ KK Sbjct: 81 IAGIIIGAVAGVVSAKK 97 >gi|149721453|ref|XP_001493458.1| PREDICTED: similar to solute carrier organic anion transporter family, member 5A1 [Equus caballus] Length = 852 Score = 38.1 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 14/128 (10%), Positives = 34/128 (26%), Gaps = 3/128 (2%) Query: 11 CIGRSFLMSCLFIVFIAWVIQ---ILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 FL+ + FI Q I+ + V + ++ +P F Sbjct: 649 NTLIPFLIFLFIVTFITACAQPSAIIVTLRSVEDEERPFALGMQFVLLRTLAYIPTPIYF 708 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 ++TT +L + + TS + + + Sbjct: 709 GAVIDTTCMLWQHECGVQGSCWEYNVTSFRFVYFGLAAGLKFVGFVFIFLAWYSIKYKED 768 Query: 128 TIKQLSAK 135 +++ + Sbjct: 769 ELQRRRWR 776 >gi|331700964|ref|YP_004397923.1| hypothetical protein Lbuc_0594 [Lactobacillus buchneri NRRL B-30929] gi|329128307|gb|AEB72860.1| hypothetical protein Lbuc_0594 [Lactobacillus buchneri NRRL B-30929] Length = 247 Score = 38.1 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 33/83 (39%), Gaps = 1/83 (1%) Query: 276 LTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY 335 ++ + + +++++ R I I + L + + I NP Sbjct: 159 ISAAVAGLGIPIVTMMFTP-GVKHRFSIWIRIILVVLFLIVWMGIFTLSSILPPVLNPVL 217 Query: 336 IPILYLFLFCISSIFLLMIKKKY 358 PI+Y+ L +S + +K+++ Sbjct: 218 NPIVYIVLGVLSGVAAFFVKRRF 240 >gi|67078108|ref|YP_245728.1| hypothetical protein pE33L466_0233 [Bacillus cereus E33L] gi|66970414|gb|AAY60390.1| conserved hypothetical protein [Bacillus cereus E33L] Length = 813 Score = 38.1 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 12/82 (14%), Positives = 30/82 (36%), Gaps = 1/82 (1%) Query: 276 LTQWLFPVIFGLISIVAADKRALVRQ-RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY 334 + L + L+++V A R + + + ++I F + F Sbjct: 336 IIVALMSPVMLLMALVPAWTGTAKRFLSELFRTLLMKVAIGFLITLMFWVSSILFSATDK 395 Query: 335 YIPILYLFLFCISSIFLLMIKK 356 Y ++ L +S + + + +K Sbjct: 396 YGYLVVAALQVLSFLGVWLYRK 417 >gi|224543383|ref|ZP_03683922.1| hypothetical protein CATMIT_02583 [Catenibacterium mitsuokai DSM 15897] gi|224523710|gb|EEF92815.1| hypothetical protein CATMIT_02583 [Catenibacterium mitsuokai DSM 15897] Length = 651 Score = 38.1 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 12/154 (7%), Positives = 32/154 (20%), Gaps = 1/154 (0%) Query: 75 NVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSA 134 + +K ++ + + + + Sbjct: 466 WYYIHNGVHQTSYSSLVLYNGTWYYVKNGKIDWHYTNLVQYHGTWYYVENGKINWGKNTL 525 Query: 135 KAQLALTFSYLEENLFF-RLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGS 193 Y EN L + + + +Y +G Sbjct: 526 SQVNGHGAWYYIENSQINWHYTGLTQYFGTWYYIQNGALNWSYNGLVYYHGTWFYVHNGQ 585 Query: 194 IDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 ID + ++L +G + D + + Sbjct: 586 IDWNYSNLVLYNGTWYYVENGKIDWNKITLSQVD 619 >gi|170032349|ref|XP_001844044.1| neurotransmitter gated ion channel [Culex quinquefasciatus] gi|167872330|gb|EDS35713.1| neurotransmitter gated ion channel [Culex quinquefasciatus] Length = 406 Score = 38.1 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 21/253 (8%), Positives = 62/253 (24%), Gaps = 4/253 (1%) Query: 112 IFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQ 171 +F ++ K + + L +R D LY + + Sbjct: 75 NSIFTVSGWLKMKWNDDKLKWNPDDYGKLNVIRTNPESVWRPDLVLYNNARPSDIEHYGM 134 Query: 172 GIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVH----RKSPISKDISIMKFKSYT 227 ++ + + L+ + + + ++I +F Sbjct: 135 TNVLIYNTGEVLWVPPTDYHANCKLNLRFWPFDQQTCFVKIGSWTFDGYKLNISEFGKAK 194 Query: 228 LQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGL 287 + + N+ VL + + P + R R + L Sbjct: 195 VDIDVDNNEWTVLDLATDIHTTIYECCPEPYMDIRYNVTLQRQSSTHRAIVISPAFVIML 254 Query: 288 ISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCIS 347 +++ ++ ++ I + F +++ Sbjct: 255 LALSVFWLPPNCGEKIVLNGIIALIVTVFLIYFATQLPAMSGNTPLIVTFFSTTLYLVAF 314 Query: 348 SIFLLMIKKKYTK 360 L +I + ++ Sbjct: 315 GTILSVIVLRMSR 327 >gi|116668913|ref|YP_829846.1| putative ribonuclease BN [Arthrobacter sp. FB24] gi|116609022|gb|ABK01746.1| putative ribonuclease BN [Arthrobacter sp. FB24] Length = 377 Score = 38.1 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 8/89 (8%), Positives = 35/89 (39%), Gaps = 12/89 (13%) Query: 274 KRLTQW--LFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ 331 + +W + ++ I+++ + + + + + ++++ + ++ + Sbjct: 221 WNIAKWPVMLVLVIAAIAVLFYATPNVKQPKFRWMSMGSAIALVVFLLASLAFGFYVANF 280 Query: 332 N----------PYYIPILYLFLFCISSIF 350 N I +L+L++ +S +F Sbjct: 281 NSYNKTYGAIGGVIIALLWLWILNMSLLF 309 >gi|54262214|ref|NP_001005820.1| transmembrane channel-like protein 3 [Gallus gallus] gi|82197656|sp|Q5YCC7|TMC3_CHICK RecName: Full=Transmembrane channel-like protein 3 gi|52547957|gb|AAT85601.1| transmembrane channel-like 3 [Gallus gallus] Length = 1138 Score = 38.1 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 20/153 (13%), Positives = 41/153 (26%), Gaps = 5/153 (3%) Query: 190 QSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSF 249 + +I ++ N E + F++ Q E ++ Q L Sbjct: 26 RHANIYTYQEPPHSNSDEDISEEKADSQDPEQVFQNIQYQKEVMSNIRCRPWPMRQKLRV 85 Query: 250 LLNPNPNNPNYRPELLE-----TYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKK 304 L Y L +E ++ + + + I K+ Sbjct: 86 LRQAKEIVLKYEGRLTRTRGYQAAGAELWRKFLRLAYNFVVLFIPWEMRIKKIESHFGSG 145 Query: 305 IHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP 337 + FI L FG+ + + P + Sbjct: 146 VASYFIFLRWLFGINIVLTIMTGAFVVLPELLA 178 >gi|224476219|ref|YP_002633825.1| hypothetical protein Sca_0730 [Staphylococcus carnosus subsp. carnosus TM300] gi|222420826|emb|CAL27640.1| putative membrane protein [Staphylococcus carnosus subsp. carnosus TM300] Length = 266 Score = 38.1 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 13/93 (13%), Positives = 28/93 (30%), Gaps = 20/93 (21%) Query: 265 LETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSY 324 +Y E + + + ++ LI+ V R I + ++ F Sbjct: 48 SSSYLQE--SMIFEAVALIVVALIAAVGIVLSKKNRIIGGILLVIAAIVGIFLSN----- 100 Query: 325 IIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + LF I+ I L + + + Sbjct: 101 -------------FIATILFFIAGIMLFVRRSQ 120 >gi|301766258|ref|XP_002918549.1| PREDICTED: solute carrier organic anion transporter family member 5A1-like isoform 1 [Ailuropoda melanoleuca] gi|281351670|gb|EFB27254.1| hypothetical protein PANDA_007020 [Ailuropoda melanoleuca] Length = 855 Score = 38.1 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 16/152 (10%), Positives = 38/152 (25%), Gaps = 3/152 (1%) Query: 11 CIGRSFLMSCLFIVFIAWVIQ---ILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 FL+ + FI Q I+ + V + ++ +P F Sbjct: 649 NTLIPFLIFLFIVTFITACAQPSAIIVTLRSVEDEERPFALGMQFVLLRTLAYIPTPIYF 708 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 ++TT +L + + TS + + + Sbjct: 709 GAVIDTTCMLWQQECGVQGSCWEYNVTSFRFVYFGLAAGLKFVGFIFIFLAWYSIKYKED 768 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYI 159 +++ + T S + + Sbjct: 769 ELQRQRWREFPLSTVSEMVGHTDNADKYARTR 800 >gi|256374478|ref|YP_003098138.1| hypothetical protein Amir_0323 [Actinosynnema mirum DSM 43827] gi|255918781|gb|ACU34292.1| putative membrane protein [Actinosynnema mirum DSM 43827] Length = 442 Score = 38.1 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 8/86 (9%), Positives = 28/86 (32%), Gaps = 3/86 (3%) Query: 279 WLFPVIFG-LISIVAADKRALVRQRKKIHP--IFISLSISFGVFWGFSYIIHKIEQNPYY 335 +F ++ I ++ +I + ++ W FS + Sbjct: 202 PFAHPLFTSMLGIGVGLAAMSHKRGVRIAGPLLGYLGAVGLHSLWNFSTTVGTGSTFINL 261 Query: 336 IPILYLFLFCISSIFLLMIKKKYTKI 361 ++ + +F ++ +++ +I Sbjct: 262 YFLIMVPIFAGMVWLVVWQRRREQRI 287 >gi|326926750|ref|XP_003209560.1| PREDICTED: LOW QUALITY PROTEIN: transmembrane channel-like protein 3-like [Meleagris gallopavo] Length = 1143 Score = 38.1 bits (86), Expect = 2.5, Method: Composition-based stats. Identities = 20/160 (12%), Positives = 42/160 (26%), Gaps = 5/160 (3%) Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + +I ++ N E + + F++ Q E ++ Sbjct: 19 KKYRMVKRHANIYTYQEPPHSNSDEDIGEEKANSHDPEQVFQNIQYQKEVMSNIRCRPWP 78 Query: 243 NDQNLSFLLNPNPNNPNYRPELLE-----TYRSEFHKRLTQWLFPVIFGLISIVAADKRA 297 Q L L Y L +E ++ + + + I K+ Sbjct: 79 MRQKLRALRQAKEIVLKYEGRLTRTRGYQAAGAELWRKFLRLAYNFVVLFIPWEMRIKKI 138 Query: 298 LVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP 337 + FI L FG+ + + P + Sbjct: 139 ESHFGSGVASYFIFLRWLFGINIVLTIMTGAFVVLPELLA 178 >gi|317035868|ref|XP_001397079.2| hypothetical protein ANI_1_1614134 [Aspergillus niger CBS 513.88] Length = 764 Score = 38.1 bits (86), Expect = 2.5, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 30/94 (31%), Gaps = 2/94 (2%) Query: 251 LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFI 310 ++ Y P R ++ LI +A R + I I Sbjct: 344 ISYTVKYLAYSPSKYYKDLETNWFRFGIVATILMSLLIPFSSATLRKRYYEVFLIIHILS 403 Query: 311 SLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLF 344 ++ I +F S E P+ P++ ++ F Sbjct: 404 AIVIVCALFIHISKFG--TEYTPHLWPVVAIWSF 435 >gi|315040666|ref|XP_003169710.1| ATP-binding cassette transporter [Arthroderma gypseum CBS 118893] gi|311345672|gb|EFR04875.1| ATP-binding cassette transporter [Arthroderma gypseum CBS 118893] Length = 1460 Score = 37.7 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 13/169 (7%), Positives = 37/169 (21%), Gaps = 2/169 (1%) Query: 15 SFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETT 74 F + + + + I + I +S + + + I + V P + + Sbjct: 601 FFFYLLVVFLIVLGMSGIFRFIGSLSRTEQQAMVPASIMMLALLIFTGFVVPIDYMLPWC 660 Query: 75 NVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSA 134 + N + + I ++ T Sbjct: 661 RWI--HYLNPVAYGYEALMINEFHGRNFPCTSYIPDYTNTSLNNVACNAVGAITGSTYVN 718 Query: 135 KAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 T + +R + + + +I + Sbjct: 719 GDHYINTAYRYYRSHKWRNVSIILAMAVFNHLIYFITSEYIRAKKSKGE 767 >gi|301611698|ref|XP_002935370.1| PREDICTED: solute carrier organic anion transporter family member 5A1-like [Xenopus (Silurana) tropicalis] Length = 879 Score = 37.7 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 20/180 (11%), Positives = 47/180 (26%), Gaps = 3/180 (1%) Query: 11 CIGRSFLMSCLFIVFIAWVIQ---ILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 FL+ + I Q I+ + V + ++ +P F Sbjct: 677 NTLIPFLIFLFIVTLITACAQPSAIIVTLRSVEEGERPFALGMQFVLLRTLAYIPTPIYF 736 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 ++TT +L + + + TS + + L Sbjct: 737 GAVIDTTCMLWQQDCGVQGSCWEYNVTSFRFVYFGLAAGLKFLGFIFIFLAWYSIKHKED 796 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIY 187 +++ +A T S + N+ + + ++ T + Y Sbjct: 797 QLQRRRWRASPISTVSEMVSNVTAGQNYARTRSCPTFGAREEPNENININRGIQHTAQTY 856 >gi|291388101|ref|XP_002710508.1| PREDICTED: solute carrier organic anion transporter family, member 5A1 [Oryctolagus cuniculus] Length = 851 Score = 37.7 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 14/130 (10%), Positives = 34/130 (26%), Gaps = 3/130 (2%) Query: 11 CIGRSFLMSCLFIVFIAWVIQ---ILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 FL+ + FI Q I+ + V + ++ +P F Sbjct: 649 NTLIPFLVFLFIVTFITACAQPSAIIVTLRSVEDEERPFALGMQFVLLRTLAYIPTPIYF 708 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 ++TT +L + + TS + + + Sbjct: 709 GAVIDTTCMLWQQECGVQGSCWEYNVTSFRFVYFGLAAGLKFVGFIFIFLAWYSIKYKEE 768 Query: 128 TIKQLSAKAQ 137 ++ + + Sbjct: 769 GRQRQRWRER 778 >gi|73999471|ref|XP_535098.2| PREDICTED: similar to organic anion transporter polypeptide-related protein 4 [Canis familiaris] Length = 851 Score = 37.7 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 16/152 (10%), Positives = 38/152 (25%), Gaps = 3/152 (1%) Query: 11 CIGRSFLMSCLFIVFIAWVIQ---ILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 FL+ + FI Q I+ + V + ++ +P F Sbjct: 649 NTLIPFLIFLFIVTFITACAQPSAIIVTLRSVEDEERPFALGMQFVLLRTLAYIPTPIYF 708 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 ++TT +L + + TS + + + Sbjct: 709 GAVIDTTCMLWQQECGVQGSCWEYNVTSFRFVYFGLAAGLKFVGFIFIFLAWYSIKYKED 768 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYI 159 +++ + T S + + Sbjct: 769 ELQRQRWREFPLSTVSEMVGHTDNADKYARTR 800 >gi|239813399|ref|YP_002942309.1| histidine kinase [Variovorax paradoxus S110] gi|239799976|gb|ACS17043.1| histidine kinase [Variovorax paradoxus S110] Length = 657 Score = 37.7 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 8/82 (9%), Positives = 29/82 (35%), Gaps = 3/82 (3%) Query: 279 WLFPVIFGLISIVAADKRALV--RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYI 336 L + L+ + A + R+ + + + + + + + + +P Sbjct: 338 PLIYLGAALMGVAVALVGGISAWRRSGEGRLVAVGIGVCVLLGVSDWLLQNNFV-SPEGW 396 Query: 337 PILYLFLFCISSIFLLMIKKKY 358 + S+F +++ ++Y Sbjct: 397 YLGAYTNAVTFSVFGVLLYRRY 418 >gi|224534174|ref|ZP_03674754.1| conserved hypothetical integral membrane protein [Borrelia spielmanii A14S] gi|224514599|gb|EEF84913.1| conserved hypothetical integral membrane protein [Borrelia spielmanii A14S] Length = 429 Score = 37.7 bits (85), Expect = 2.7, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 38/108 (35%), Gaps = 1/108 (0%) Query: 251 LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFI 310 LN P + L + EF+++++ L + F ++ I I Sbjct: 321 LNFKPYQDRSMKQNLALFNLEFYQKISLPLSVLFFIFLAFSMGLYSNRKYSIILELVISI 380 Query: 311 SLSISF-GVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + + +F G + NP + IL + I+ L + K Sbjct: 381 IICVFYWVMFIGGKVYTVQYAPNPIIVTILPNLILIIAGAILFLRILK 428 Score = 37.7 bits (85), Expect = 3.3, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 81/207 (39%), Gaps = 5/207 (2%) Query: 1 MKSF----ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYL 56 MK E YI+ + FL++ LF F+ ++ QIL + ++ + Y Sbjct: 1 MKILKNSYESYIIAEFFKYFLITFLFFFFVFFINQILFFMRILLQNYVPFFKAFIFIIYS 60 Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 +P V+ + PF + + + E+L + G S L+ P L I++ FI Sbjct: 61 LPMVIALSPPFASLISVILTIHKFKIHNEILAFRSIGISIFDLLVPFFKLGIIIVFISFI 120 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 S +I+ P ++ + + + L+ + DL + + N F Sbjct: 121 SNDILLPLGSIGRLKIFNEIKEEVPHLVLKPYSSKQYG-DLIFVSGEKSENGYKNVTFFD 179 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIIL 203 ++R +I+ A++ I + + Sbjct: 180 NTRLKGFDRIFMAKNLDIRKENFQVYF 206 >gi|327269805|ref|XP_003219683.1| PREDICTED: solute carrier organic anion transporter family member 5A1-like [Anolis carolinensis] Length = 869 Score = 37.7 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 15/152 (9%), Positives = 39/152 (25%), Gaps = 3/152 (1%) Query: 11 CIGRSFLMSCLFIVFIAWVIQ---ILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 FL+ + I Q I+ + V + ++ +P F Sbjct: 667 NTLIPFLVFLFIVTLITACAQPSAIIVTLRSVEDGERPFALGMQFVLLRTLAYIPTPIYF 726 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 ++TT +L + + TS + + + Sbjct: 727 GAVIDTTCMLWQQECGVQGSCWEYDVTSFRFVYFGLAAGLKCVGFLFIFLAWYSIKYKEE 786 Query: 128 TIKQLSAKAQLALTFSYLEENLFFRLDDDLYI 159 +++ + T + + N + + Sbjct: 787 KLQRQMWRDSHISTVNEVVGNTGMQQNYARTR 818 >gi|328675456|gb|AEB28131.1| Cell division protein FtsK [Francisella cf. novicida 3523] Length = 830 Score = 37.7 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 35/253 (13%), Positives = 70/253 (27%), Gaps = 7/253 (2%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 YI I F + + +I ++ + L+ +S L + + T+ +V Sbjct: 64 YIASFILSIFGVI--GFILPFLLIDFVRIL-LIKRKQQS----LSYLLFAVKTIGIIVFI 116 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCR 126 L+ N G + L L L + Sbjct: 117 LSCCGLAELYLSFANYWVPQRSGGILGYESVKLTIKYLGSVGGSFALLIALLVGLTLYSG 176 Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 +T L + + ++ DD IS + + +RD + Sbjct: 177 TTWMYLFKNLAIFVAKAFSYITKAKTNDDKNIPDISNFETFEGKNNLTNPLNRDNKVISS 236 Query: 187 YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 + + + D KD F+ L+ + + S + L + Sbjct: 237 IFEDNQQSHKKDVFREVLDNTKVTNELSFKDPKTESFQKPDLEILADSDSILDLDVDVDL 296 Query: 247 LSFLLNPNPNNPN 259 S LL+ + N Sbjct: 297 DSELLSLSDNETK 309 >gi|218528322|ref|YP_002419138.1| PAS/PAC sensor hybrid histidine kinase [Methylobacterium chloromethanicum CM4] gi|218520625|gb|ACK81210.1| PAS/PAC sensor hybrid histidine kinase [Methylobacterium chloromethanicum CM4] Length = 766 Score = 37.7 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 12/93 (12%), Positives = 31/93 (33%), Gaps = 5/93 (5%) Query: 270 SEFHKRLTQWLFPVIFGL----ISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYI 325 E H L+ L +I + I ++ R + + + I+ + G + + Sbjct: 72 MEAHYDLSLTLLSLIVPVAVTGIGFAVVNRPQRSRFALAASGLLMGIGIAAMHYTGMAAM 131 Query: 326 -IHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + + + + +S L + K Sbjct: 132 HVPASLRYDALWVAVSILIAVGASTIALWLAFK 164 >gi|111115642|ref|YP_710260.1| hypothetical protein BAPKO_0860 [Borrelia afzelii PKo] gi|110890916|gb|ABH02084.1| hypothetical protein BAPKO_0860 [Borrelia afzelii PKo] Length = 429 Score = 37.7 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 81/207 (39%), Gaps = 5/207 (2%) Query: 1 MKSF----ELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYL 56 MK E YI+ + FL++ LF F+ ++ QIL + ++ + Y Sbjct: 1 MKILKNSYESYIITEFFKYFLITFLFFFFVFFINQILFFMRILLQNYVPFFKAFIFIIYS 60 Query: 57 IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI 116 +P V+ + PF + + + E+L + G S L+ P L I++ FI Sbjct: 61 LPMVIALSPPFASLISVILTIHKFKIHNEILAFRSIGISIFDLLIPFFKLGIIIVFISFI 120 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIV 176 S +I+ P ++ + + + L+ + DL + + N F Sbjct: 121 SNDILLPLGSIGRLKIFNEIKEEVPHLVLKPYSSKQYG-DLIFVSGEKSENGYKNVTFFD 179 Query: 177 DSRDTQTHKIYYAQSGSIDLDRQAIIL 203 ++R +I+ A++ I + + Sbjct: 180 NTRLKGFDRIFMAKNLDIRKENFQVYF 206 Score = 36.5 bits (82), Expect = 5.7, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 38/108 (35%), Gaps = 1/108 (0%) Query: 251 LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFI 310 LN P + L + EF+++++ L + F ++ I I Sbjct: 321 LNFKPYQNRSMNQNLALFNLEFYQKISLPLSVLFFIFLAFSMGLYSNKKYSIILELVISI 380 Query: 311 SLSISF-GVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + + +F G + NP + IL + I+ L + K Sbjct: 381 IICVFYWVMFIGGKVYTVQYAPNPIIVTILPNLILIIAGAILFLRLLK 428 >gi|219685677|ref|ZP_03540491.1| conserved hypothetical integral membrane protein [Borrelia garinii Far04] gi|219672793|gb|EED29818.1| conserved hypothetical integral membrane protein [Borrelia garinii Far04] Length = 390 Score = 37.7 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 38/108 (35%), Gaps = 1/108 (0%) Query: 251 LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFI 310 LN P + L + EF+++++ L + F ++ I I Sbjct: 282 LNFKPYQDKSMKQNLALFNLEFYQKISLPLSVLFFIFLAFSMGMYSNRKYSIILELVISI 341 Query: 311 SLSISF-GVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + + +F G + NP + IL + I+ L + K Sbjct: 342 IICVFYWVMFIGGKVYTVQYAPNPIIVTILPNLILIIAGAILFLRLLK 389 >gi|257054218|ref|YP_003132050.1| hypothetical protein Svir_01350 [Saccharomonospora viridis DSM 43017] gi|256584090|gb|ACU95223.1| hypothetical protein Svir_01350 [Saccharomonospora viridis DSM 43017] Length = 498 Score = 37.7 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 10/85 (11%), Positives = 32/85 (37%), Gaps = 3/85 (3%) Query: 276 LTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSI---SFGVFWGFSYIIHKIEQN 332 ++ P + GLI++ A R+ + + + + + + + + Sbjct: 243 VSMAFAPAVVGLIALCALVGLWFARRWDRFPSVSALVGLGAGAVAYYLTYMVLGVGPYHW 302 Query: 333 PYYIPILYLFLFCISSIFLLMIKKK 357 Y P L +F ++ + + ++ + Sbjct: 303 YYVAPTTALGMFAVAILGVWLVWAR 327 >gi|15964004|ref|NP_384357.1| hypothetical protein SMc00331 [Sinorhizobium meliloti 1021] gi|15073180|emb|CAC41688.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021] Length = 335 Score = 37.7 bits (85), Expect = 3.2, Method: Composition-based stats. Identities = 8/59 (13%), Positives = 16/59 (27%) Query: 272 FHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIE 330 + Q L L+ V R + +++ SY + +E Sbjct: 80 IFWLVAQPLSLAFLALVVGVLLMLGRFRRSGGTLSAFGLAVLFVTLFTTAGSYFLQILE 138 >gi|225351954|ref|ZP_03742977.1| hypothetical protein BIFPSEUDO_03559 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225157201|gb|EEG70540.1| hypothetical protein BIFPSEUDO_03559 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 481 Score = 37.7 bits (85), Expect = 3.3, Method: Composition-based stats. Identities = 10/77 (12%), Positives = 28/77 (36%) Query: 280 LFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL 339 L + +I + + R+ + + + L++ F+ I Q+ + +L Sbjct: 21 LLAAVMFVIGLHLMNSPKTARKGNMVSAVGMILAVVMAFIVLFAGEISNGFQHGVAVVLL 80 Query: 340 YLFLFCISSIFLLMIKK 356 + + ++ KK Sbjct: 81 IAGIIIGAVAGVVSAKK 97 >gi|216263485|ref|ZP_03435480.1| conserved hypothetical integral membrane protein [Borrelia afzelii ACA-1] gi|215980329|gb|EEC21150.1| conserved hypothetical integral membrane protein [Borrelia afzelii ACA-1] Length = 390 Score = 37.7 bits (85), Expect = 3.3, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 38/108 (35%), Gaps = 1/108 (0%) Query: 251 LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFI 310 LN P + L + EF+++++ L + F ++ I I Sbjct: 282 LNFKPYQNRSMNQNLALFNLEFYQKISLPLSVLFFIFLAFSMGLYSNKKYSIILELVISI 341 Query: 311 SLSISF-GVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + + +F G + NP + IL + I+ L + K Sbjct: 342 IICVFYWVMFIGGKVYTVQYAPNPIIVTILPNLILIIAGAILFLRLLK 389 >gi|219518083|gb|AAI43977.1| ATP7B protein [Homo sapiens] Length = 1417 Score = 37.7 bits (85), Expect = 3.3, Method: Composition-based stats. Identities = 18/154 (11%), Positives = 44/154 (28%), Gaps = 10/154 (6%) Query: 209 HRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLE-- 266 H + + + S L T A +++ ++ + + Sbjct: 580 HNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIEEIGFHASLAQRNPNAH 639 Query: 267 --TYRSEF--HKR---LTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVF 319 ++ E K+ + + L+ + + H I LSI +F Sbjct: 640 HLDHKMEIKQWKKSFLCSLVFGIPVMALMIYMLIPSNEPHQSMVLDHNIIPGLSILNLIF 699 Query: 320 WGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 + + E++P LF ++ + Sbjct: 700 FILCTFVQA-ERSPVTFFDTPPMLFVFIALGRWL 732 >gi|126334342|ref|XP_001377157.1| PREDICTED: similar to ABC-C transporter [Monodelphis domestica] Length = 1709 Score = 37.7 bits (85), Expect = 3.3, Method: Composition-based stats. Identities = 14/220 (6%), Positives = 48/220 (21%), Gaps = 1/220 (0%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + +F S L + + + +Q + +++ + Sbjct: 297 MGLSNWLLWSSYFITFFFSFLITICLLTLFFFMQVFDQPIIYHSDSSLVFIFLLCFALSS 356 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIID-NTGTSRITLIKPVLFLAILLSIFLFISEN 119 + N+ + + S + + Sbjct: 357 MFFGFMISTFFNKANMAVATGGCIYFITYLPYLFISSRYNQMSLDQKLAACLLSNIAMTM 416 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 I R IK + + ++++L + + + + Sbjct: 417 GINMIVRFEIKGIGVHWERLTDTVSIDDDLNLGHILGMMLVDAFCYGLAGWYMEVVFPGE 476 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDIS 219 Y+ S + + + ++ + Sbjct: 477 YGIPQPWYFFLKRSYWYGYPKPLFRSHKDSEDNSQNQYME 516 >gi|221195096|ref|ZP_03568152.1| serine/threonine protein kinase [Atopobium rimae ATCC 49626] gi|221184999|gb|EEE17390.1| serine/threonine protein kinase [Atopobium rimae ATCC 49626] Length = 603 Score = 37.3 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 34/82 (41%), Gaps = 1/82 (1%) Query: 274 KRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH-KIEQN 332 R + W+ + L S AA + + + + L + G + SY+ + + Sbjct: 505 SRASFWIMCLGCALSSYAAALVSKKRSRIRMVFGQIVGLVLFLGTIFLASYVENKSFLPS 564 Query: 333 PYYIPILYLFLFCISSIFLLMI 354 ++PI++ C+ ++++ Sbjct: 565 VNWVPIIFAVTLCVLVCIVIVL 586 >gi|138895124|ref|YP_001125577.1| sporulation kinase B [Geobacillus thermodenitrificans NG80-2] gi|196248295|ref|ZP_03146996.1| integral membrane sensor signal transduction histidine kinase [Geobacillus sp. G11MC16] gi|134266637|gb|ABO66832.1| Sporulation kinase B [Geobacillus thermodenitrificans NG80-2] gi|196212020|gb|EDY06778.1| integral membrane sensor signal transduction histidine kinase [Geobacillus sp. G11MC16] Length = 430 Score = 37.3 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 31/78 (39%) Query: 276 LTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY 335 LT ++ ++F + + + R L R K ++++ I+ + I PY Sbjct: 108 LTFVVYAIMFVVAAAASPLFRRLPRSGKLFASLWLTFLIAILTTFVAVIIADFSVTKPYI 167 Query: 336 IPILYLFLFCISSIFLLM 353 + + + F + LM Sbjct: 168 VYFIIMPPFVMMFAVYLM 185 >gi|289668601|ref|ZP_06489676.1| YjgP/YjgQ family permease [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 129 Score = 37.3 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 22/127 (17%), Positives = 55/127 (43%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M + Y+L +SFL + + ++ ++ ++ + ++ +LL G Sbjct: 1 MPKLDRYLLSDFTQSFLATLIVLLVVSVGGVLVDILGNIADGRIPARLLLSQVGLQFVAY 60 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 LP++ P + L + R++E+ +I G +++P+L L + + + + + Sbjct: 61 LPIILPLALMLGLLLALARLYRDSEMAVITAIGVGPKRMLRPMLMLVVPVVVVIGLCSLW 120 Query: 121 IEPKCRS 127 + P R Sbjct: 121 LGPWARR 127 >gi|291302700|ref|YP_003513978.1| glycosyl transferase family 39 [Stackebrandtia nassauensis DSM 44728] gi|290571920|gb|ADD44885.1| glycosyl transferase family 39 [Stackebrandtia nassauensis DSM 44728] Length = 747 Score = 37.3 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 33/89 (37%), Gaps = 4/89 (4%) Query: 272 FHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ 331 FH+ T L P I + I A R+R + +++ ++ W F + + Sbjct: 410 FHEYYTIALAPYIAATVGIGAVILWR--RRRFPAVAVTLAVVLAVTAMWAFVLLGRSSDW 467 Query: 332 NPYYIPILYLFLFCISSIFLLMIKKKYTK 360 P+ + + + L+ ++ K Sbjct: 468 LPWLR--WTVLTVGLVAAVGLVFARRLPK 494 >gi|296135727|ref|YP_003642969.1| ferrous iron transport protein B [Thiomonas intermedia K12] gi|295795849|gb|ADG30639.1| ferrous iron transport protein B [Thiomonas intermedia K12] Length = 783 Score = 37.3 bits (84), Expect = 3.5, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 33/75 (44%) Query: 280 LFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL 339 ++F L+ + A +R+ + S+ G+ W + +I++I + P Sbjct: 686 FAYLVFVLLYVPCASTMGALRREVGWGWMVFSVLYGIGIAWAAATVIYQIGTFAQHPPSS 745 Query: 340 YLFLFCISSIFLLMI 354 L++ + F+L++ Sbjct: 746 ALWVAACVAAFVLLV 760 >gi|91215794|ref|ZP_01252764.1| hypothetical protein P700755_02717 [Psychroflexus torquis ATCC 700755] gi|91186260|gb|EAS72633.1| hypothetical protein P700755_02717 [Psychroflexus torquis ATCC 700755] Length = 708 Score = 37.3 bits (84), Expect = 3.5, Method: Composition-based stats. Identities = 13/167 (7%), Positives = 42/167 (25%), Gaps = 8/167 (4%) Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDS 178 + P ++ + + + I + Sbjct: 204 HYSSPVKKNFNTIYFDYREKRDHYYSQLKKNLNTNLKTRLGIIEELKSMIGSGESMTSSF 263 Query: 179 RDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTI 238 + + + + +GS+ + + N+ H + +F+ + I Sbjct: 264 KQFKELQERWKNAGSVPRNDYNTVWNNYHHHIERFYDFLHLDREFRDMDFKYNLDQKLKI 323 Query: 239 VLKAND--------QNLSFLLNPNPNNPNYRPELLETYRSEFHKRLT 277 + +A + ++ L + + YR E + + Sbjct: 324 INRAEELSQEEDVNRSFRELQLLHKMWKEELGPVAREYRDEIWDKFS 370 >gi|302753656|ref|XP_002960252.1| hypothetical protein SELMODRAFT_75462 [Selaginella moellendorffii] gi|300171191|gb|EFJ37791.1| hypothetical protein SELMODRAFT_75462 [Selaginella moellendorffii] Length = 1157 Score = 37.3 bits (84), Expect = 3.6, Method: Composition-based stats. Identities = 20/215 (9%), Positives = 54/215 (25%), Gaps = 8/215 (3%) Query: 148 NLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGE 207 I+++ L + S I YA +I + Sbjct: 780 RQVMTAVYASNYAIAQFRYLARLLLVHGRWSYKRNRDSIMYAFYKNIVYVAGNCYIAFYS 839 Query: 208 VHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLET 267 + P+ I + + + + + + + L NP + + + Sbjct: 840 GYSGQPLYNIFLISTYNLFWTSLPTIAYAILNKDICETTI--LNNPQLYHETQKDRTWKF 897 Query: 268 YRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH 327 +RS + +I R+ + S S++ + Sbjct: 898 FRSFCLWFIAALWHSLIVFFYPSSGIPLGRKGRRGGLANIGTTSYSMAVFIVNIKLATRM 957 Query: 328 KIE---QNPYYIPI-LYLFLFCISSIFLLMIKKKY 358 + + + L+L + +++ Sbjct: 958 NFFPWVSHAVLWGVSIGLWLLFAFVLSFFW--RRW 990 >gi|302768084|ref|XP_002967462.1| hypothetical protein SELMODRAFT_86830 [Selaginella moellendorffii] gi|300165453|gb|EFJ32061.1| hypothetical protein SELMODRAFT_86830 [Selaginella moellendorffii] Length = 1157 Score = 37.3 bits (84), Expect = 3.6, Method: Composition-based stats. Identities = 20/215 (9%), Positives = 54/215 (25%), Gaps = 8/215 (3%) Query: 148 NLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGE 207 I+++ L + S I YA +I + Sbjct: 780 RQVMTAVYASNYAIAQFRYLARLLLVHGRWSYKRNRDSIMYAFYKNIVYVAGNCYIAFYS 839 Query: 208 VHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLET 267 + P+ I + + + + + + + L NP + + + Sbjct: 840 GYSGQPLYNIFLISTYNLFWTSLPTIAYAILNKDICETTI--LNNPQLYHETQKDRTWKF 897 Query: 268 YRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIH 327 +RS + +I R+ + S S++ + Sbjct: 898 FRSFCLWFIAALWHSLIVFFYPSSGIPLGRKGRRGGLANIGTTSYSMAVFIVNIKLATRM 957 Query: 328 KIE---QNPYYIPI-LYLFLFCISSIFLLMIKKKY 358 + + + L+L + +++ Sbjct: 958 NFFPWVSHAVLWGVSIGLWLLFAFVLSFFW--RRW 990 >gi|292493519|ref|YP_003528958.1| CHASE2 domain protein [Nitrosococcus halophilus Nc4] gi|291582114|gb|ADE16571.1| CHASE2 domain protein [Nitrosococcus halophilus Nc4] Length = 763 Score = 37.3 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 11/101 (10%), Positives = 29/101 (28%), Gaps = 21/101 (20%) Query: 278 QWLFP--VIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFS-YIIHKIEQNPY 334 LF ++ L + + I +++++ G + + P Sbjct: 374 LPLFLHYLVIVLWGVAIGFLFLFL---NAYALIPTAVALAVGYMSVAYHLFVSEGLWLPL 430 Query: 335 YIPILYLFLFCISSIFLL---------------MIKKKYTK 360 IP+L+ F + L +++ + Sbjct: 431 VIPLLWQLPFGLLGALLWRYLTIGKAIRPYLPDWFWRRWNR 471 >gi|296114390|ref|ZP_06833044.1| ribonuclease BN [Gluconacetobacter hansenii ATCC 23769] gi|295979151|gb|EFG85875.1| ribonuclease BN [Gluconacetobacter hansenii ATCC 23769] Length = 397 Score = 37.3 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 10/89 (11%), Positives = 22/89 (24%) Query: 270 SEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI 329 E R+ ++F L + R+ I + ++ S+ Sbjct: 255 LELLVRMGGPALMLLFVLSGCSLLYRFGPNRRSPSWRCILPGSVAATLLWLLTSFGFSYY 314 Query: 330 EQNPYYIPILYLFLFCISSIFLLMIKKKY 358 + Y L + + Y Sbjct: 315 VSHIAGYGATYGPLGAFVATMMWFYVSAY 343 >gi|297559851|ref|YP_003678825.1| type II secretory pathway prepilin signal peptidase PulO and related peptidase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296844299|gb|ADH66319.1| Type II secretory pathway prepilin signal peptidase PulO and related peptidase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 324 Score = 37.3 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 11/105 (10%), Positives = 27/105 (25%), Gaps = 21/105 (20%) Query: 276 LTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGF------------- 322 + +PV LI + + +S+ + ++W Sbjct: 193 VVLPAYPVAAVLIGLA-VLLPPEGPDTDRAAGALVSMVLVTVLYWLLWRVHSAGLGFGDV 251 Query: 323 -------SYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 Y + + + F +LM ++ T+ Sbjct: 252 KLSGLTALYAGWAAGTLGALVAVFWAFAAFSLVGVVLMALRRLTR 296 >gi|304314700|ref|YP_003849847.1| sensory transduction regulatory protein [Methanothermobacter marburgensis str. Marburg] gi|302588159|gb|ADL58534.1| predicted sensory transduction regulatory protein [Methanothermobacter marburgensis str. Marburg] Length = 707 Score = 37.3 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 31/107 (28%), Gaps = 16/107 (14%) Query: 270 SEFHKRLTQWLFPVIFGLISI------VAADKRALVRQRKKIHPIFISLSISFGVFWGFS 323 H+RL + I V A R + I +S S Sbjct: 590 IALHRRLDAIFYLFSMIFIGFVMLGYIVFILNLAGFGFRMEAPFIIGLISTVAFFPLTMS 649 Query: 324 YIIHKIEQNP--------YYIPILYLFLFCISSIFLLMIK--KKYTK 360 I P Y+ LYL +++ ++ + +++ K Sbjct: 650 GIRMDGYSIPRTILLSIEYWAYCLYLIPLFVAATVHMLRRRERRWAK 696 >gi|195035128|ref|XP_001989046.1| GH10257 [Drosophila grimshawi] gi|193905046|gb|EDW03913.1| GH10257 [Drosophila grimshawi] Length = 1359 Score = 37.3 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 35/367 (9%), Positives = 94/367 (25%), Gaps = 22/367 (5%) Query: 5 ELYILRCIGRSFLMSCL-----FIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPT 59 + +I+ + S + L + ++ Q++ V S + + L + +P Sbjct: 485 DHHIIVEVLISSWYALLANTDLICYIVVFINQVVN--ASVISLPLPIMVFLWGT-LSLPR 541 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 P T T + + + + + + Sbjct: 542 ------PTKTFWVTLIAYTQAIVLIKCIFQFKLIWANYQNLAHQPLRPAKIFGVEMKTHY 595 Query: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 + + L + + I ++ + Sbjct: 596 AVYDLILLLVLFLHRYLLKSQGLWKSGYKDTDQQFAKPTTSIDDREDSDNMSQPDSRQLN 655 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + K S + ++ + + F + + ++ Sbjct: 656 EDAAQKQSLQVSQVSLPGSPEYSKSAINQLERTKYTSSLHKFFFSLVHKSRLATDVYALM 715 Query: 240 LKANDQNLSFLLNPNPNNPNYRPEL---LETYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 + N LL + E ++TY +E ++ ++ ++ D+ Sbjct: 716 FLCDFINFFVLLFGFTAFGTQQTESDGGVQTYLAE--NKVPVPFLIMLLVQFLLIVIDRA 773 Query: 297 ALVRQ---RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLM 353 +R+ K F + I +F+ + + + I Y+ + Sbjct: 774 LYLRKALVNKIFFHFFSVIGIHIWMFFVVPAVTERSFNSLAPPIIFYVIKCFYMLLSSYQ 833 Query: 354 IKKKYTK 360 IK Y K Sbjct: 834 IKSGYPK 840 >gi|268536348|ref|XP_002633309.1| Hypothetical protein CBG06044 [Caenorhabditis briggsae] Length = 1694 Score = 37.3 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 20/278 (7%), Positives = 73/278 (26%), Gaps = 23/278 (8%) Query: 7 YILRC--IGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 Y +R ++ + + W ++++ ++++ + L + I +IP+++ Sbjct: 1179 YFIRLSPTTKTLGRILIICNSVIWSLKLVDYLSVL----QGLGPYINIVAEMIPSMI--- 1231 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P C + T + R + ++ + I + + ++ + + Sbjct: 1232 -PLCVLVFITLYSFGLLRQSITYPYEDWHWILVRNIFLQPYFMLYGEVYAAEIDTCGDEI 1290 Query: 125 CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQ----GIFIVDSRD 180 + + + L +T + ++ + + Sbjct: 1291 WHTHEDENIPISMLNVTHETCVPGYWIAPVGLTVFMLATNVLLMNVMVAGCTYIFEKHIE 1350 Query: 181 TQTHKIYYAQSGSIDLDRQAIILND---------GEVHRKSPISKDISIMKFKSYTLQTE 231 + + + G + L S+ +L+ Sbjct: 1351 STREIFLFERYGQVMEYESTPWLPPPFTIIYHIIWVFKLIKYSSRMFERKNLFDQSLKLF 1410 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYR 269 + + ++ + N +R Sbjct: 1411 LSPDEMEKVHTFEEESVEDMKRETEKKNLSSNDERIHR 1448 >gi|296506485|ref|YP_003667719.1| hypothetical protein BMB171_P0104 [Bacillus thuringiensis BMB171] gi|296327072|gb|ADH09999.1| hypothetical protein BMB171_P0104 [Bacillus thuringiensis BMB171] Length = 821 Score = 37.3 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 12/82 (14%), Positives = 29/82 (35%), Gaps = 1/82 (1%) Query: 276 LTQWLFPVIFGLISIVAADKRALVRQRK-KIHPIFISLSISFGVFWGFSYIIHKIEQNPY 334 + L + L+++V A R + + ++I F + F Sbjct: 336 IIVALMSPVMLLMALVPAWTGTAKRFLAELFRTLLMKVAIGFLITLMFWVSSILFSATDK 395 Query: 335 YIPILYLFLFCISSIFLLMIKK 356 Y ++ L +S + + + +K Sbjct: 396 YGYLVVAALQVLSFLGVWLYRK 417 >gi|261339774|ref|ZP_05967632.1| quinate/shikimate dehydrogenase [Enterobacter cancerogenus ATCC 35316] gi|288318607|gb|EFC57545.1| quinate/shikimate dehydrogenase [Enterobacter cancerogenus ATCC 35316] Length = 794 Score = 37.3 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 12/71 (16%), Positives = 24/71 (33%), Gaps = 3/71 (4%) Query: 275 RLTQWLFPVIFGLISIV---AADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ 331 R+ QWL + LI + K A V + I + I+ + + I + Sbjct: 12 RILQWLLAGLMVLIGLAVGGLGLKLATVGGSWYFLIMGIVMVIAAILIFTNRTIGIVLYA 71 Query: 332 NPYYIPILYLF 342 + + + Sbjct: 72 LAFIASLFWAV 82 >gi|224533436|ref|ZP_03674029.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi CA-11.2a] gi|224513398|gb|EEF83756.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi CA-11.2a] Length = 390 Score = 37.3 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 38/110 (34%), Gaps = 2/110 (1%) Query: 251 LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFI 310 LN P + L + EF+++++ L + F ++ R+ I + I Sbjct: 282 LNFKPYQDRSMKQNLALFNLEFYQKISLPLSVLFFIFLAFSMGMYS--NRKYSIILELVI 339 Query: 311 SLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTK 360 S+ + + F Q I+ + I I ++ + K Sbjct: 340 SIIVCVFYWVMFIGGKVYTVQYAPSPIIVTILPNLILIIAGAILFLRLLK 389 >gi|328946678|gb|EGG40816.1| hypothetical protein HMPREF9397_0201 [Streptococcus sanguinis SK1087] Length = 689 Score = 37.3 bits (84), Expect = 4.2, Method: Composition-based stats. Identities = 9/54 (16%), Positives = 22/54 (40%), Gaps = 1/54 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISG 54 M+ Y+++ +SFL +F+ + + L S+ S + + + Sbjct: 1 MEIIMKYLMKKYVKSFLFGL-TFIFVLFSSAVYAVTELTESTNLSTLDIYQFTL 53 >gi|325687336|gb|EGD29358.1| hypothetical protein HMPREF9381_1485 [Streptococcus sanguinis SK72] Length = 689 Score = 37.3 bits (84), Expect = 4.2, Method: Composition-based stats. Identities = 9/54 (16%), Positives = 22/54 (40%), Gaps = 1/54 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISG 54 M+ Y+++ +SFL +F+ + + L S+ S + + + Sbjct: 1 MEIIMKYLMKKYVKSFLFGL-TFIFVLFSSAVYAVTELTESTNLSTLDIYQFTL 53 >gi|290979746|ref|XP_002672594.1| B-lectin domain-containing protein [Naegleria gruberi] gi|284086172|gb|EFC39850.1| B-lectin domain-containing protein [Naegleria gruberi] Length = 2047 Score = 37.3 bits (84), Expect = 4.2, Method: Composition-based stats. Identities = 32/335 (9%), Positives = 87/335 (25%), Gaps = 18/335 (5%) Query: 13 GRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAME 72 + + +V + + ++ VSS + + + ++ L + ++ Sbjct: 1535 IIYLIAASAILVGLIVL----RKSQPVSSRLLTP--YVGLIALIVECTLIYIVQRSVLVD 1588 Query: 73 TTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQL 132 N + + + ++ + AI + ++ + Sbjct: 1589 QLNSANTQMWENGDTAANIIANIVMIIVNTLNLTAIFCYVMQVFRFQFMKLLYKKLSDNR 1648 Query: 133 SAKAQLALTFSYLEENLFFRLDDDL---------YIKISKYNPNNTLQGIFIVDSRDTQT 183 + + + Y I + + + Sbjct: 1649 TQAQSATVLKVLKYTTSQILFYSLIGIFTALNIAYWVIWVILRRTGVLTSTQYTYVVSLS 1708 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 + + G I + + + F T N+ + K Sbjct: 1709 YTVCILAFGLIITAVAILDMILSSKKEVEQKKNRRKAINFSQPTSNFSLDNAENVHEKKK 1768 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 ++ + N N + +R E + ++ ++ +I + + R Sbjct: 1769 ---INRNVFLNAFNWFTSMDGPLYFRMEMFIYIVSFILLILNQVIGLSSLAYRFESLTMF 1825 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 K+ F S+S F V + SYI+ I Sbjct: 1826 KLALTFDSISFIFEVLYVVSYILVFGGYALIVAII 1860 >gi|308492528|ref|XP_003108454.1| hypothetical protein CRE_11023 [Caenorhabditis remanei] gi|308248194|gb|EFO92146.1| hypothetical protein CRE_11023 [Caenorhabditis remanei] Length = 684 Score = 37.3 bits (84), Expect = 4.2, Method: Composition-based stats. Identities = 10/171 (5%), Positives = 43/171 (25%), Gaps = 2/171 (1%) Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + +KA ++++ + F+ Sbjct: 191 QIINVKRRGRPSKADKRSPVDQFINLTPQSAQFQKLLEVNGTASTSFTAVSFLESDAPDD 250 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + I++ ++ L + + + ++ F + + + ++ ++ Sbjct: 251 LGFTPAMYNALIEMIQETPQL--WQNDNPNRKNGELRDKNFDDISRKLILKFNGSLDIQQ 308 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 +++ + + + E R L + L+ Sbjct: 309 SERMTGSFIRKIWETLKEKFQREEKLDKISQWRYYLPLQFLSNRLMPAFLL 359 >gi|296226658|ref|XP_002759024.1| PREDICTED: solute carrier organic anion transporter family member 5A1 isoform 2 [Callithrix jacchus] Length = 793 Score = 36.9 bits (83), Expect = 4.4, Method: Composition-based stats. Identities = 14/128 (10%), Positives = 34/128 (26%), Gaps = 3/128 (2%) Query: 11 CIGRSFLMSCLFIVFIAWVIQ---ILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 FL+ + FI Q I+ + V + ++ +P F Sbjct: 591 NTLIPFLVFLFIVTFITACAQPSAIIVTLRSVEDEERPFALGMQFVLLRTLAYIPTPIYF 650 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 ++TT +L + + TS + + + Sbjct: 651 GAVIDTTCMLWQQECGVQGSCWEYNVTSFRFVYFGLAAGLKFVGFIFIFLAWYSIKYKED 710 Query: 128 TIKQLSAK 135 +++ + Sbjct: 711 GLQRRRWR 718 >gi|149411150|ref|XP_001510737.1| PREDICTED: similar to solute carrier organic anion transporter family, member 5A1, partial [Ornithorhynchus anatinus] Length = 290 Score = 36.9 bits (83), Expect = 4.4, Method: Composition-based stats. Identities = 14/113 (12%), Positives = 28/113 (24%), Gaps = 3/113 (2%) Query: 11 CIGRSFLMSCLFIVFIAWVIQ---ILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 FL+ + FI Q I+ + V + ++ +P F Sbjct: 105 NTLIPFLVFLFIVTFITACAQPSAIIVTLRSVEDGERPFALGMQFVLLRTLAYIPTPIYF 164 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++TT +L + TS + + Sbjct: 165 GAVIDTTCMLWQQECGVRGSCWEYDVTSFRFVYFGLAAGLKCFGFVFIFLAWY 217 >gi|332367302|gb|EGJ45037.1| hypothetical protein HMPREF9396_0181 [Streptococcus sanguinis SK1059] Length = 689 Score = 36.9 bits (83), Expect = 4.6, Method: Composition-based stats. Identities = 9/54 (16%), Positives = 22/54 (40%), Gaps = 1/54 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISG 54 M+ Y+++ +SFL +F+ + + L S+ S + + + Sbjct: 1 MEIIMKYLMKKYVKSFLFGL-TFIFVLFSSAVYAVTELTESTNLSTLDIYQFTL 53 >gi|320107799|ref|YP_004183389.1| WD40-like beta Propeller containing protein [Terriglobus saanensis SP1PR4] gi|319926320|gb|ADV83395.1| WD40-like beta Propeller containing protein [Terriglobus saanensis SP1PR4] Length = 677 Score = 36.9 bits (83), Expect = 4.8, Method: Composition-based stats. Identities = 46/339 (13%), Positives = 91/339 (26%), Gaps = 20/339 (5%) Query: 34 QRINLVSSSTESLNILLKISGYL--IPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDN 91 + I LVS + S ++G + ++ F + +L S+ + Sbjct: 52 RVIGLVSVTPFSTLAAWPLTGLTPLTAKHIWILLNLAFLIPIGWILRSITGLGSRRVALI 111 Query: 92 TGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFF 151 S + +L + L + ++ L +FF Sbjct: 112 LFLSFPLHRNLLYGQFYVLLLLLISGACFCYLRRHRSLAGGLLAVAAVCKVFPLILFIFF 171 Query: 152 RLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRK 211 D I+ + + I Q I G Sbjct: 172 LQRRDWRALIAGVTTGISAVVVSIAAFGLNAHRNWLQEQLPWIMRGDW-----LGAYASS 226 Query: 212 SPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFL-LNPNPNNPNYRPELLETYRS 270 + IS + + ++S + L L L P E E Sbjct: 227 ASISGVLHRLFLSEPQWNPHPWHNSPLCYALLAPTLQMLALAPAILLIRRDDESKERVLL 286 Query: 271 EFHKRLTQWL--------FPVIFGL--ISIVAADKRALVRQRKKIHPIFISLSISFGVFW 320 E+ LT L + + + + ++AA R +F L I F V Sbjct: 287 EWSALLTASLTISTIPASYTFVLMVFPVCVLAAILLRQRRYGWLAALVFAYLGIGFPVSA 346 Query: 321 GFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYT 359 + +P++ LF + L+ +++ + Sbjct: 347 PSRPLGLVFLLYVPRLPLMMAVLFGTYA--LMWNRRRES 383 >gi|310821064|ref|YP_003953422.1| sensor protein [Stigmatella aurantiaca DW4/3-1] gi|309394136|gb|ADO71595.1| Sensor protein [Stigmatella aurantiaca DW4/3-1] Length = 748 Score = 36.9 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 30/86 (34%) Query: 273 HKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN 332 RLT ++ + LIS+ R +Q + L+I GV S + Sbjct: 124 WARLTLSVWVLGALLISVSLLFLRVRNQQSRIERLRLTYLAIGAGVSILLSLLDLVSGHY 183 Query: 333 PYYIPILYLFLFCISSIFLLMIKKKY 358 +P L + +FL ++ Sbjct: 184 DIPLPSLGAVFTTLYLVFLYQTLRRL 209 >gi|125718440|ref|YP_001035573.1| hypothetical protein SSA_1635 [Streptococcus sanguinis SK36] gi|125498357|gb|ABN45023.1| Hypothetical protein SSA_1635 [Streptococcus sanguinis SK36] Length = 689 Score = 36.9 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 9/54 (16%), Positives = 22/54 (40%), Gaps = 1/54 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISG 54 M+ Y+++ +SFL +F+ + + L S+ S + + + Sbjct: 1 MEIIMKYLMKKYVKSFLFGL-TFIFVLFSSAVYAVTELTESTNLSTLDIYQFTL 53 >gi|259417188|ref|ZP_05741107.1| adenylate cyclase protein [Silicibacter sp. TrichCH4B] gi|259346094|gb|EEW57908.1| adenylate cyclase protein [Silicibacter sp. TrichCH4B] Length = 327 Score = 36.9 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 6/72 (8%), Positives = 25/72 (34%), Gaps = 4/72 (5%) Query: 286 GLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFC 345 ++++ + F+ + + V GF ++++ + + Sbjct: 256 PMLALAMVIGLRDGHRILGRSE-FLGIPVKLCVIAGFLFLVNLFSWEGALWSL---WPIG 311 Query: 346 ISSIFLLMIKKK 357 ++F L +++ Sbjct: 312 GIAVFSLFKRRR 323 >gi|229100019|ref|ZP_04230939.1| hypothetical protein bcere0020_52340 [Bacillus cereus Rock3-29] gi|228683447|gb|EEL37405.1| hypothetical protein bcere0020_52340 [Bacillus cereus Rock3-29] Length = 794 Score = 36.9 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 29/82 (35%), Gaps = 1/82 (1%) Query: 276 LTQWLFPVIFGLISIVAADKRALVRQRK-KIHPIFISLSISFGVFWGFSYIIHKIEQNPY 334 + L + L+++V A R + + ++I F V F Sbjct: 323 IIVALMSPVMLLMALVPAWTGTAKRFLAELFRTLLMKVAIGFLVTLMFWVSSILFSATDK 382 Query: 335 YIPILYLFLFCISSIFLLMIKK 356 Y ++ L +S + + + +K Sbjct: 383 YGYLVVAALQVLSFLGVWLYRK 404 >gi|254456791|ref|ZP_05070219.1| conserved hypothetical protein [Campylobacterales bacterium GD 1] gi|207085583|gb|EDZ62867.1| conserved hypothetical protein [Campylobacterales bacterium GD 1] Length = 605 Score = 36.9 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 34/98 (34%), Gaps = 9/98 (9%) Query: 273 HKRLTQWLFPVIFGLISIVAADKR--------ALVRQRKKIHPIFISLSISFGVFWGF-S 323 + R+ Q + + I+I +VR+ K + + + + F V GF Sbjct: 30 YFRIIQAVHVLSSAFIAIFLLLPYVNLHTYEYMIVRRAKSTSGVILGILLFFIVASGFYL 89 Query: 324 YIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTKI 361 + + + + Y+ LF + + KI Sbjct: 90 FFVGNPGGDAIGLVSYYIHLFGSFVLLYFLFLHARKKI 127 >gi|47565357|ref|ZP_00236399.1| hypothetical protein BCE_G9241_pBC218_0120 [Bacillus cereus G9241] gi|208742262|ref|YP_002267714.1| hypothetical protein pBC210_00760 [Bacillus cereus] gi|47557711|gb|EAL16037.1| membrane protein, putative [Bacillus cereus G9241] Length = 781 Score = 36.9 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 29/82 (35%), Gaps = 1/82 (1%) Query: 276 LTQWLFPVIFGLISIVAADKRALVRQRK-KIHPIFISLSISFGVFWGFSYIIHKIEQNPY 334 + L + L+++V A R + + ++I F V F Sbjct: 336 IIVALMSPVMLLMALVPAWTGTAKRFLAELFRTLLMKVAIGFLVTLMFWVSSILFSATDK 395 Query: 335 YIPILYLFLFCISSIFLLMIKK 356 Y ++ L +S + + + +K Sbjct: 396 YGYLVVAALQVLSFLGVWLYRK 417 >gi|255566630|ref|XP_002524299.1| Cellulose synthase A catalytic subunit 6 [UDP-forming], putative [Ricinus communis] gi|223536390|gb|EEF38039.1| Cellulose synthase A catalytic subunit 6 [UDP-forming], putative [Ricinus communis] Length = 1095 Score = 36.9 bits (83), Expect = 5.0, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 34/97 (35%), Gaps = 1/97 (1%) Query: 261 RPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFW 320 E E Y ++ L L + +I IV A+ P F L + V Sbjct: 979 DGEFSELYLFKWTSLLIPPLTLLFINIIGIVVGVANAINNGYDSWGPFFGRLFFAGWVIL 1038 Query: 321 GFS-YIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 ++ + + I+ ++ ++SI L+ + Sbjct: 1039 HLYPFLKGFLGKQDRLPTIILVWSILLASICSLLWVR 1075 >gi|326470922|gb|EGD94931.1| peptidase M28 [Trichophyton tonsurans CBS 112818] Length = 962 Score = 36.9 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 34/358 (9%), Positives = 93/358 (25%), Gaps = 27/358 (7%) Query: 18 MSCLFIVFIAWVIQILQRINLVSSSTESLNILL-----KISGYLIPTVLPMVTPFCFAME 72 ++ L + + +I + + S+ + ++S Y + + P + Sbjct: 391 VALLVVSPLLLIITSVALFAVDKMYMFSMYTYISESGGQVSLYGLRGMFR--FPLILGIS 448 Query: 73 TTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQL 132 T + ++ + + +++ Sbjct: 449 TALTIALAFLIMKVNPFIIYSSPYAVWSMMLSTCMFFAWFISCVADFARPSALHRAYAFS 508 Query: 133 SAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSG 192 + + Y + + I ++ + Y + G Sbjct: 509 WMFGIMWVFLVIATVYQKQHGIASSYFIVFYFAGVAVATWISYLELFGLPKTQDYARRQG 568 Query: 193 SI-DLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLL 251 + D + + P S + F ++ E ST +L+ + Sbjct: 569 RLSDRTPSSDSHFLAPSADELPSSSSAAGRDFNPEDVEDEEPTESTSLLRGQQRTTFANY 628 Query: 252 -----NPNPNNPNYRPELLETYRSEFHKRLTQWLF------------PVIFGLISIVAAD 294 + N N L ++ + +L P++ L+ + Sbjct: 629 ASARGSQESNISNQGSSSLHPKDHRLEQKWSIYLMSSAWILQFLLVAPIVIILLGQLGLF 688 Query: 295 KRALVRQRK--KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 + Q + I + I+ + I + Y+IP LF+ + ++ Sbjct: 689 LTSATYQIGADGGSQLVIYIGIAVLSVLILLPLFPFIHRFTYHIPTFLLFILIGTLVY 746 >gi|145221724|ref|YP_001132402.1| hypothetical protein Mflv_1132 [Mycobacterium gilvum PYR-GCK] gi|315446540|ref|YP_004079419.1| hypothetical protein Mspyr1_50550 [Mycobacterium sp. Spyr1] gi|145214210|gb|ABP43614.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] gi|315264843|gb|ADU01585.1| hypothetical protein Mspyr1_50550 [Mycobacterium sp. Spyr1] Length = 376 Score = 36.9 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 11/76 (14%), Positives = 24/76 (31%) Query: 276 LTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY 335 L V+ L + AA R R R+ ++ I V +++ + + Sbjct: 146 WLLPLLYVLVALSLVAAAGLRHSNRTRRGRALFVFTIGIVLIVLALAFFLLRAVGTSGLV 205 Query: 336 IPILYLFLFCISSIFL 351 L + + + Sbjct: 206 GVGAAATLLGCAMLIV 221 >gi|116668959|ref|YP_829892.1| hypothetical protein Arth_0391 [Arthrobacter sp. FB24] gi|116609068|gb|ABK01792.1| protein of unknown function DUF6, transmembrane [Arthrobacter sp. FB24] Length = 331 Score = 36.9 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 8/80 (10%), Positives = 31/80 (38%) Query: 281 FPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY 340 + ++ +V K ++ + ++ PI + FG + + ++ Sbjct: 85 LAIAAVVLGLVVLPKLRILPKGREWWPILAYGVMWFGGYNVALNAAEHLLDAGTAALLIN 144 Query: 341 LFLFCISSIFLLMIKKKYTK 360 + ++ + L++K+ + + Sbjct: 145 VNPILVAVMAGLLLKEGFPR 164 >gi|71982042|ref|NP_502111.3| Gon-Two Like (TRP subfamily) family member (gtl-1) [Caenorhabditis elegans] gi|30145746|emb|CAA92726.2| C. elegans protein C05C12.3, confirmed by transcript evidence [Caenorhabditis elegans] gi|52082722|gb|AAU25950.1| GTL-1 [Caenorhabditis elegans] Length = 1694 Score = 36.9 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 21/278 (7%), Positives = 72/278 (25%), Gaps = 23/278 (8%) Query: 7 YILRC--IGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 Y +R ++ + + W ++++ +++ + L + I +IPT++ Sbjct: 1168 YFIRLSPTTKTLGRILIICNSVIWSLKLVDYLSV----QQGLGPYINIVAEMIPTMI--- 1220 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P C + T + R + ++ + I + + ++ + + Sbjct: 1221 -PLCVLVFITLYAFGLLRQSITYPYEDWHWILVRNIFLQPYFMLYGEVYAAEIDTCGDEI 1279 Query: 125 CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQ----GIFIVDSRD 180 ++ + + L +T + ++ + Sbjct: 1280 WQTHEDENIPISMLNVTHETCVPGYWIAPVGLTVFMLATNVLLMNVMVAGCTYIFEKHIQ 1339 Query: 181 TQTHKIYYAQSGSIDLDRQAIILND---------GEVHRKSPISKDISIMKFKSYTLQTE 231 + + + G + L S+ +L+ Sbjct: 1340 STREIFLFERYGQVMEYESTPWLPPPFTIIYHVIWLFKLIKSSSRMFERKNLFDQSLKLF 1399 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYR 269 + + ++ + N +R Sbjct: 1400 LSPDEMEKVHTFEEESVEDMKRETEKKNLSSNDERIHR 1437 >gi|308491256|ref|XP_003107819.1| CRE-GTL-1 protein [Caenorhabditis remanei] gi|308249766|gb|EFO93718.1| CRE-GTL-1 protein [Caenorhabditis remanei] Length = 1717 Score = 36.9 bits (83), Expect = 5.2, Method: Composition-based stats. Identities = 20/278 (7%), Positives = 74/278 (26%), Gaps = 23/278 (8%) Query: 7 YILRC--IGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 Y +R ++ + + W ++++ ++++ + L + I +IP+++ Sbjct: 1180 YFIRLSPTTKTLGRILIICNSVIWSLKLVDYLSVL----QGLGPYINIVAEMIPSMI--- 1232 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P C + T + R + ++ + I + + ++ + + Sbjct: 1233 -PLCVLVFITLYSFGLLRQSITYPYEDWHWILVRNIFLQPYFMLYGEVYAAEIDTCGDEI 1291 Query: 125 CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQ----GIFIVDSRD 180 + + + L +T + ++ + + Sbjct: 1292 WHTHEDENIPISMLNVTHETCVPGYWIAPVGLTVFMLATNVLLMNVMVAGCTYIFEKHIE 1351 Query: 181 TQTHKIYYAQSGSIDLDRQAIILND---------GEVHRKSPISKDISIMKFKSYTLQTE 231 + + + G + L + S+ +L+ Sbjct: 1352 STREIFLFERYGQVMEYESTPWLPPPFTIIYHIIWVIKLIRYSSRMFERKNLFDQSLKLF 1411 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYR 269 + + ++ + N +R Sbjct: 1412 LSPDEMEKVHTFEEESVEDMKRETEKKNLSSNDERIHR 1449 >gi|294339891|emb|CAZ88254.1| Fe2+ transport system protein FeoB [Thiomonas sp. 3As] Length = 763 Score = 36.9 bits (83), Expect = 5.2, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 33/75 (44%) Query: 280 LFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL 339 ++F L+ + A +R+ + S+ G+ W + +I++I + P Sbjct: 666 FAYLVFVLLYVPCASTMGALRREVGWGWMVFSVLYGIGIAWAAATVIYQIGTFAQHPPSS 725 Query: 340 YLFLFCISSIFLLMI 354 L++ + F+L++ Sbjct: 726 ALWVAACVAAFVLLV 740 >gi|24412718|emb|CAC81667.1| putative TRP homologous cation channel [Caenorhabditis elegans] Length = 1681 Score = 36.9 bits (83), Expect = 5.3, Method: Composition-based stats. Identities = 21/278 (7%), Positives = 72/278 (25%), Gaps = 23/278 (8%) Query: 7 YILRC--IGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 Y +R ++ + + W ++++ +++ + L + I +IPT++ Sbjct: 1155 YFIRLSPTTKTLGRILIICNSVIWSLKLVDYLSV----QQGLGPYINIVAEMIPTMI--- 1207 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P C + T + R + ++ + I + + ++ + + Sbjct: 1208 -PLCVLVFITLYAFGLLRQSITYPYEDWHWILVRNIFLQPYFMLYGEVYAAEIDTCGDEI 1266 Query: 125 CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQ----GIFIVDSRD 180 ++ + + L +T + ++ + Sbjct: 1267 WQTHEDENIPISMLNVTHETCVPGYWIAPVGLTVFMLATNVLLMNVMVAGCTYIFEKHIQ 1326 Query: 181 TQTHKIYYAQSGSIDLDRQAIILND---------GEVHRKSPISKDISIMKFKSYTLQTE 231 + + + G + L S+ +L+ Sbjct: 1327 STREIFLFERYGQVMEYESTPWLPPPFTIIYHVIWLFKLIKSSSRMFERKNLFDQSLKLF 1386 Query: 232 SANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYR 269 + + ++ + N +R Sbjct: 1387 LSPDEMEKVHTFEEESVEDMKRETEKKNLSSNDERIHR 1424 >gi|146344011|ref|YP_001201867.1| putative transmembrane thiol:disulfide interchange protein DsbD precursor [Pseudomonas fluorescens SBW25] gi|146187823|emb|CAM96151.1| putative transmembrane thiol:disulfide interchange protein DsbD precursor [Pseudomonas fluorescens SBW25] Length = 598 Score = 36.9 bits (83), Expect = 5.3, Method: Composition-based stats. Identities = 11/85 (12%), Positives = 25/85 (29%), Gaps = 1/85 (1%) Query: 269 RSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFIS-LSISFGVFWGFSYIIH 327 E K + L++ V R+ I F + ++ F V I Sbjct: 192 YVEGLKLFLTPGVLPVIPLLAFVLLLGELSARRGITIGLAFTAPMAAGFVVLNSAIAITE 251 Query: 328 KIEQNPYYIPILYLFLFCISSIFLL 352 + +++ + + + L Sbjct: 252 AGIEIQPIAQSVWILVPSVLILLGL 276 >gi|304397300|ref|ZP_07379179.1| type VI secretion protein IcmF [Pantoea sp. aB] gi|304355449|gb|EFM19817.1| type VI secretion protein IcmF [Pantoea sp. aB] Length = 1209 Score = 36.9 bits (83), Expect = 5.4, Method: Composition-based stats. Identities = 36/308 (11%), Positives = 72/308 (23%), Gaps = 18/308 (5%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNI--LLKISGYLIP 58 + + + F+ + FI WVI + ++V S ++ I+ + Sbjct: 2 LNILFAVLTSRLAWGFVGITA-LSFIIWVIGPV--FSIVDSRPLEPEQNRMISIALLYLV 58 Query: 59 TVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISE 118 L P + + ++ + + L + F Sbjct: 59 WGLGQAIP--------RLYNYWLNRKLMSSLETGKSDAPEADRQRLTSEEQVLAGRFSEA 110 Query: 119 NIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF-IVD 177 + K A F K F + D Sbjct: 111 TEMLRKAHFQRHSSKGTPFWAQRFGRQYLYQLPWYMIIGAPGAGKTTALVNSGLQFPLAD 170 Query: 178 SRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQT--ESANS 235 + +L D + S+ S + L + Sbjct: 171 KFGKSALRGIGGTRNCDWWFTNDAVLLDTAGRYSTQESQQDSDASEWHHFLDLLRKYRGR 230 Query: 236 STIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADK 295 I ++S LL+ +P + L E H RL ++ L++ K Sbjct: 231 QPINGVIVTLSVSDLLSQSPEALRNQALALRQRLMELHDRLGIRF--PVYVLVTKADLLK 288 Query: 296 RALVRQRK 303 Sbjct: 289 GFRSYFGS 296 >gi|260428072|ref|ZP_05782051.1| apolipoprotein N-acyltransferase [Citreicella sp. SE45] gi|260422564|gb|EEX15815.1| apolipoprotein N-acyltransferase [Citreicella sp. SE45] Length = 511 Score = 36.9 bits (83), Expect = 5.4, Method: Composition-based stats. Identities = 10/71 (14%), Positives = 20/71 (28%), Gaps = 1/71 (1%) Query: 284 IFGLISIVAADKRALVRQRKKIHPIFISLS-ISFGVFWGFSYIIHKIEQNPYYIPILYLF 342 + GL+ V R+ + L + + W + P F Sbjct: 42 VAGLLGAVLVFSITSTRRGAFGAGWGVGLGYFALVLNWVTEPFQVDAATTGWMAPFALFF 101 Query: 343 LFCISSIFLLM 353 L ++F + Sbjct: 102 LAAGLALFWAL 112 >gi|269838005|ref|YP_003320233.1| hypothetical protein Sthe_1981 [Sphaerobacter thermophilus DSM 20745] gi|269787268|gb|ACZ39411.1| conserved hypothetical protein [Sphaerobacter thermophilus DSM 20745] Length = 227 Score = 36.9 bits (83), Expect = 5.4, Method: Composition-based stats. Identities = 9/79 (11%), Positives = 22/79 (27%), Gaps = 12/79 (15%) Query: 282 PVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL 341 P+ I + R I I++ + F + Sbjct: 41 PLAIIAIGLAQLAASRHTRVG---PAILIAVGLVFL-------ASTTGLVPGSIWSLF-- 88 Query: 342 FLFCISSIFLLMIKKKYTK 360 + + +I L +I ++ + Sbjct: 89 WPLVLIAIGLFVILRRGPR 107 >gi|94984323|ref|YP_603687.1| cation diffusion facilitator family transporter [Deinococcus geothermalis DSM 11300] gi|94554604|gb|ABF44518.1| cation diffusion facilitator family transporter [Deinococcus geothermalis DSM 11300] Length = 299 Score = 36.9 bits (83), Expect = 5.4, Method: Composition-based stats. Identities = 9/100 (9%), Positives = 32/100 (32%), Gaps = 6/100 (6%) Query: 268 YRSEFHKRLTQWLFP-----VIFGLISIVAADKRALVRQRKKIHPIFI-SLSISFGVFWG 321 E + RL + + ++ L+ ++ A + + + S + Sbjct: 104 ILVEAYGRLREPVAVQTTPMLVVALLGLIVNLLSARILAGGAEDSLNVRSAYLEVLGDLL 163 Query: 322 FSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTKI 361 S + + ++ + I L ++ + ++ + Sbjct: 164 GSVAVIIGALVIRLTGLTWVDPVLGAGIGLWVLPRAWSLL 203 >gi|121607297|ref|YP_995104.1| major facilitator superfamily transporter [Verminephrobacter eiseniae EF01-2] gi|121551937|gb|ABM56086.1| major facilitator superfamily MFS_1 [Verminephrobacter eiseniae EF01-2] Length = 396 Score = 36.9 bits (83), Expect = 5.5, Method: Composition-based stats. Identities = 11/81 (13%), Positives = 30/81 (37%), Gaps = 6/81 (7%) Query: 271 EFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIE 330 E H RL + F + + A R + + ++++ V G + Sbjct: 243 EQHWRLYLPAVVLSFAALGGLFAL----ERAGRLRAALLGAIALVLLVQAGLGALAVSGA 298 Query: 331 QNPYYI--PILYLFLFCISSI 349 ++ P++++F +++ Sbjct: 299 TPTLWLLGPLMWVFFCGFNAL 319 >gi|308452863|ref|XP_003089210.1| hypothetical protein CRE_24889 [Caenorhabditis remanei] gi|308241643|gb|EFO85595.1| hypothetical protein CRE_24889 [Caenorhabditis remanei] Length = 684 Score = 36.9 bits (83), Expect = 5.6, Method: Composition-based stats. Identities = 10/171 (5%), Positives = 43/171 (25%), Gaps = 2/171 (1%) Query: 123 PKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQ 182 + +KA ++++ + F+ Sbjct: 191 QIINVKRRGRPSKADKRSPVDQFINLTPQSAQFQKLLEVTGTASTSFTAVSFLESDAPDD 250 Query: 183 THKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKA 242 + I++ ++ L + + + ++ F + + + ++ ++ Sbjct: 251 LGFTPAMYNALIEMIQETPQL--WQNDHPNRKNGELRDKNFDDISRKLILKFNGSLDIQQ 308 Query: 243 NDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAA 293 +++ + + + E R L + L+ Sbjct: 309 SERMTGSFIRKIWETLKEKFQREEKLDKISQWRYYLPLQFLSNRLMPAFLL 359 >gi|294880545|ref|XP_002769056.1| hypothetical protein Pmar_PMAR027045 [Perkinsus marinus ATCC 50983] gi|239872155|gb|EER01774.1| hypothetical protein Pmar_PMAR027045 [Perkinsus marinus ATCC 50983] Length = 262 Score = 36.5 bits (82), Expect = 5.7, Method: Composition-based stats. Identities = 6/87 (6%), Positives = 25/87 (28%), Gaps = 3/87 (3%) Query: 277 TQWLFPVIFGLISIVA---ADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP 333 + + +I +++ A K I + ++ + Sbjct: 23 SSPILILIIVALTLFFTFGALMALRAPAGSKWRAIILPKMGIIFCSLLVWFVFTGSDVYT 82 Query: 334 YYIPILYLFLFCISSIFLLMIKKKYTK 360 I + + ++++L ++ + Sbjct: 83 VLILCIPVAGPMFAALWLWYRDRRQKR 109 >gi|261416817|ref|YP_003250500.1| adenylate/guanylate cyclase with Chase sensor [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373273|gb|ACX76018.1| adenylate/guanylate cyclase with Chase sensor [Fibrobacter succinogenes subsp. succinogenes S85] gi|302325711|gb|ADL24912.1| adenylate/guanylate cyclase domain protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 1010 Score = 36.5 bits (82), Expect = 5.8, Method: Composition-based stats. Identities = 22/250 (8%), Positives = 69/250 (27%), Gaps = 25/250 (10%) Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDT 181 I + ++ +N + +I + I + Sbjct: 451 YAYKDLKIGEHKHLSRSMDISYDKAKNKWSASIHFFTNQI--LQDISNASDQQIASIKPG 508 Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESAN------- 234 + + + I+ + +I G + P ++ + + ++ + Sbjct: 509 EELRFGPYKRIPINDHGRFLIKYKGRFNDLKPETRAFKHISYYDIYRDHKNLDQYAGKTV 568 Query: 235 --------SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFG 286 IV +++N+ +L N + T +E ++R+ + +I Sbjct: 569 ILGSSVSALFDIVNGPHEENIPAILVHANIIKNVLEDDYMTILNENYQRIAVIVLAIICM 628 Query: 287 LISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCI 346 LI + + + I +++ + +F + + + + Sbjct: 629 LIGVYF--------RSFVSLILTIGIAVLYTLFAYICFKHNIYIGVSKQLLAIITPNIIA 680 Query: 347 SSIFLLMIKK 356 + K Sbjct: 681 MVVQAYFENK 690 >gi|224062611|ref|XP_002197267.1| PREDICTED: transmembrane channel-like 3 [Taeniopygia guttata] Length = 1122 Score = 36.5 bits (82), Expect = 5.8, Method: Composition-based stats. Identities = 23/161 (14%), Positives = 45/161 (27%), Gaps = 6/161 (3%) Query: 182 QTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLK 241 + + Q+G +D + + S D + F++ Q E ++ Sbjct: 17 KKQRTVKRQTGIYTYQEPPHSNSDDDAAEEKAESHDPEQI-FQNIQYQKEIMSNIRCRPW 75 Query: 242 ANDQNLSFLLNPNPNNPNYRPELLE-----TYRSEFHKRLTQWLFPVIFGLISIVAADKR 296 Q L L Y L +E K+ + + + I K+ Sbjct: 76 PMRQKLRALRQAKEIVLKYEGRLTRTRGYQAAGAELWKKFIRLAYNFVVIFIPWEMRIKK 135 Query: 297 ALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP 337 + FI L FG+ + + P + Sbjct: 136 IESHFGSGVASYFIFLRWLFGINIVLTIMTGAFVVLPELLA 176 >gi|326561252|gb|EGE11611.1| putative ABC transporter permease protein YjgP/YjgQ [Moraxella catarrhalis 46P47B1] Length = 120 Score = 36.5 bits (82), Expect = 5.8, Method: Composition-based stats. Identities = 18/117 (15%), Positives = 42/117 (35%), Gaps = 1/117 (0%) Query: 3 SFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLP 62 Y++R + + + + + V L ++ +S T +L L Y P L Sbjct: 5 ILPKYVIRSALLAMAGAVVGLWLVQMVFAYLAELDNISE-TYTLTDALLFILYRSPYFLV 63 Query: 63 MVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 P + L + ++EL+++ G S ++ + A++ + Sbjct: 64 QFIPTGTLLGAVIGLGLLANHSELIVMRAAGMSIYRIVSWAMLPAVIFVAISLGVNH 120 >gi|323351146|ref|ZP_08086802.1| hypothetical protein HMPREF9398_0850 [Streptococcus sanguinis VMC66] gi|322122370|gb|EFX94081.1| hypothetical protein HMPREF9398_0850 [Streptococcus sanguinis VMC66] Length = 689 Score = 36.5 bits (82), Expect = 5.9, Method: Composition-based stats. Identities = 9/54 (16%), Positives = 22/54 (40%), Gaps = 1/54 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISG 54 M+ Y+++ +SFL +F+ + + L S+ S + + + Sbjct: 1 MEIIMKYLMKKYVKSFLFGL-TFIFVLFSSAVYAVTELTESTNLSTLDIYQFTL 53 >gi|307306416|ref|ZP_07586160.1| protein of unknown function DUF218 [Sinorhizobium meliloti BL225C] gi|306902258|gb|EFN32855.1| protein of unknown function DUF218 [Sinorhizobium meliloti BL225C] Length = 262 Score = 36.5 bits (82), Expect = 5.9, Method: Composition-based stats. Identities = 8/59 (13%), Positives = 16/59 (27%) Query: 272 FHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIE 330 + Q L L+ V R + +++ SY + +E Sbjct: 7 IFWLVAQPLSLAFLALVVGVLLMLGRFRRSGGTLSAFGLAVLFVTLFTTAGSYFLQILE 65 >gi|320163247|gb|EFW40146.1| predicted protein [Capsaspora owczarzaki ATCC 30864] Length = 511 Score = 36.5 bits (82), Expect = 6.0, Method: Composition-based stats. Identities = 12/83 (14%), Positives = 27/83 (32%), Gaps = 2/83 (2%) Query: 274 KRLTQWLFPVIFGLIS--IVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQ 331 +RL + L VA R+R + ++ F + Sbjct: 270 ERLLMPWWCAFLPLCCTSFVALVSVVAQRRRSGSALPLLEITFIALFFVFLVVGLKLDGW 329 Query: 332 NPYYIPILYLFLFCISSIFLLMI 354 + PI+Y+ ++ + I ++ Sbjct: 330 INWSWPIVYIPIYGLLFIGSFIL 352 >gi|324991425|gb|EGC23358.1| hypothetical protein HMPREF9388_0267 [Streptococcus sanguinis SK353] Length = 689 Score = 36.5 bits (82), Expect = 6.1, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 22/54 (40%), Gaps = 1/54 (1%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISG 54 M+ Y+++ +SFL +F+ + + L S+ S + + S Sbjct: 1 MEIIMKYLMKKYVKSFLFGL-TFIFVLFSSAVYAVTELTESTNLSTLDIYQFSL 53 >gi|307319303|ref|ZP_07598732.1| protein of unknown function DUF218 [Sinorhizobium meliloti AK83] gi|306895139|gb|EFN25896.1| protein of unknown function DUF218 [Sinorhizobium meliloti AK83] Length = 262 Score = 36.5 bits (82), Expect = 6.2, Method: Composition-based stats. Identities = 8/59 (13%), Positives = 16/59 (27%) Query: 272 FHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIE 330 + Q L L+ V R + +++ SY + +E Sbjct: 7 IFWLVAQPLSLAFLALVVGVLLMLGRFRRSGGTLSAFGLAVLFVTLFTTAGSYFLQILE 65 >gi|258510579|ref|YP_003184013.1| hypothetical protein Aaci_0576 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257477305|gb|ACV57624.1| hypothetical protein Aaci_0576 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 1007 Score = 36.5 bits (82), Expect = 6.4, Method: Composition-based stats. Identities = 36/368 (9%), Positives = 97/368 (26%), Gaps = 38/368 (10%) Query: 7 YILRCIGRSF--LMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 YI + +F + + + F W IQ +L+ LL +I + + Sbjct: 32 YIFANLLWTFCTFLVQVSLAFFQWGIQ-----------GTALSGLLDAVLSVIHLGVNTL 80 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P F + + + + + + + Sbjct: 81 EPIAFVLALFVLAGMWVWDLLRK-----RPTVMWARFVKMCATLFAIWIYGHVNATFVNT 135 Query: 125 CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI----VDSRD 180 + + +A + + L +I + + D Sbjct: 136 LNNATDETAASLGNVVLSLTHQGETVSSASTTLEQQIWSSLVQVPWEQGEMGGDLSIRSD 195 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + A SG Q + + ++ + M L + ++ Sbjct: 196 DLSSVEACATSGVDWNKVQTTDKWADALLQLPVGNQARNCMA---GILNSSKYPTAQQAF 252 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + ++ L L+ + + +L ++ G+ + Sbjct: 253 SSGNRLSVTLAVGFNLLGPVLFLLVFGLLAMIAR--AGFLITLMLGVFVLPVELFPVTRT 310 Query: 301 QRKKIHPIFISLSISFGVFWGFSY----------IIHKIEQNPYYIPILYLFLFCISSIF 350 + + +L+ G Y + I+ P ++ +L+L + ++IF Sbjct: 311 YGRTLRWALTALAGLVGTAVIDLYVAVVIVVGDVFQNAIQGAPLFLSMLWLNVLYFAAIF 370 Query: 351 -LLMIKKK 357 + ++ Sbjct: 371 VFFWLLRR 378 >gi|225637475|ref|NP_001139481.1| solute carrier organic anion transporter family member 5A1 isoform 3 [Homo sapiens] Length = 793 Score = 36.5 bits (82), Expect = 6.4, Method: Composition-based stats. Identities = 14/117 (11%), Positives = 30/117 (25%), Gaps = 3/117 (2%) Query: 11 CIGRSFLMSCLFIVFIAWVIQ---ILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 FL+ + FI Q I+ + V + ++ +P F Sbjct: 591 NTLIPFLVFLFIVTFITACAQPSAIIVTLRSVEDEERPFALGMQFVLLRTLAYIPTPIYF 650 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 ++TT +L + + TS + + + Sbjct: 651 GAVIDTTCMLWQQECGVQGSCWEYNVTSFRFVYFGLAAGLKFVGFIFIFLAWYSIKY 707 >gi|320033901|gb|EFW15847.1| conserved hypothetical protein [Coccidioides posadasii str. Silveira] Length = 311 Score = 36.5 bits (82), Expect = 6.6, Method: Composition-based stats. Identities = 15/115 (13%), Positives = 30/115 (26%), Gaps = 18/115 (15%) Query: 258 PNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFG 317 P + L YR H ++ + ++ +V R + IF ++S F Sbjct: 127 PKALSKGLNAYRKVAHWLFVAYIIALASSVVQLVLGISAVFSRWGSLVTTIFATISTVFT 186 Query: 318 VFWGFSYII----HKIEQNPYYIPI--------------LYLFLFCISSIFLLMI 354 + + N P LF ++ + Sbjct: 187 ILASITASALYGILAGAINGGLKPFNIKASLGGRMFAITWLATLFAVAGGVFWLF 241 >gi|257793103|ref|YP_003186501.1| hypothetical protein Aaci_3116 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479795|gb|ACV60112.1| hypothetical protein Aaci_3116 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 996 Score = 36.5 bits (82), Expect = 6.7, Method: Composition-based stats. Identities = 36/368 (9%), Positives = 97/368 (26%), Gaps = 38/368 (10%) Query: 7 YILRCIGRSF--LMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMV 64 YI + +F + + + F W IQ +L+ LL +I + + Sbjct: 32 YIFANLLWTFCTFLVQVSLAFFQWGIQ-----------GTALSGLLDAVLSVIHLGVNTL 80 Query: 65 TPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 P F + + + + + + + Sbjct: 81 EPIAFVLALFVLAGMWVWDLLRK-----RPTVMWARFVKMCATLFAIWIYGHVNATFVNT 135 Query: 125 CRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFI----VDSRD 180 + + +A + + L +I + + D Sbjct: 136 LNNATDETAASLGNVVLSLTHQGETVSSASTTLEQQIWSSLVQVPWEQGEMGGDLSIRSD 195 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVL 240 + A SG Q + + ++ + M L + ++ Sbjct: 196 DLSSVEACATSGVDWNKVQTTDKWADALLQLPVGNQARNCMA---GILNSSKYPTAQQAF 252 Query: 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 + ++ L L+ + + +L ++ G+ + Sbjct: 253 SSGNRLSVTLAVGFNLLGPVLFLLVFGLLAMIAR--AGFLITLMLGVFVLPVELFPVTRT 310 Query: 301 QRKKIHPIFISLSISFGVFWGFSY----------IIHKIEQNPYYIPILYLFLFCISSIF 350 + + +L+ G Y + I+ P ++ +L+L + ++IF Sbjct: 311 YGRTLRWALTALAGLVGTAVIDLYVAVVIVVGDVFQNAIQGAPLFLSMLWLNVLYFAAIF 370 Query: 351 -LLMIKKK 357 + ++ Sbjct: 371 VFFWLLRR 378 >gi|296817419|ref|XP_002849046.1| ATP-binding cassette transporter [Arthroderma otae CBS 113480] gi|238839499|gb|EEQ29161.1| ATP-binding cassette transporter [Arthroderma otae CBS 113480] Length = 1506 Score = 36.5 bits (82), Expect = 6.7, Method: Composition-based stats. Identities = 13/184 (7%), Positives = 40/184 (21%), Gaps = 4/184 (2%) Query: 15 SFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETT 74 F + + + + + I +S + + + I + V P + + Sbjct: 628 FFFYLLVVFTIVLAMSGVFRFIGSLSRTEQQAMVPASIMLLALLIFTGFVVPIDYMLPWC 687 Query: 75 NVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSA 134 + N + + + + I ++ + Sbjct: 688 RWI--NYLNPVAYGYEALMINEFHGREFLCTSYIPDYTNAAMNNVACNAVGAVSGSMYVN 745 Query: 135 KAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSI 194 T + +R I + + ++ + G I Sbjct: 746 GDHYINTAYSYHHSHKWRNFG--IILVMAVFNHLIYFITSEYARAKKSKGEVLVFRRGFI 803 Query: 195 DLDR 198 Sbjct: 804 HRSP 807 >gi|189536631|ref|XP_684701.3| PREDICTED: solute carrier organic anion transporter family member 5A1-like [Danio rerio] Length = 859 Score = 36.5 bits (82), Expect = 6.7, Method: Composition-based stats. Identities = 14/129 (10%), Positives = 32/129 (24%), Gaps = 3/129 (2%) Query: 11 CIGRSFLMSCLFIVFIAWVIQ---ILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 FL+ + I Q I+ + V + ++ +P F Sbjct: 660 NTLIPFLIFLFIVTLITACAQPSAIIVTLRSVDEQERPFALGMQFVLLRTLAYIPTPIYF 719 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 ++TT +L + + TS + + + Sbjct: 720 GAVIDTTCMLWQQDCGIHGSCWEYDVTSFRFVYFGLAASLKFVGFIFIFLTWYSIKYKED 779 Query: 128 TIKQLSAKA 136 +K+ Sbjct: 780 RLKRWQQHL 788 >gi|141796399|gb|AAI39756.1| SLCO5A1 protein [Homo sapiens] Length = 793 Score = 36.5 bits (82), Expect = 6.7, Method: Composition-based stats. Identities = 14/117 (11%), Positives = 30/117 (25%), Gaps = 3/117 (2%) Query: 11 CIGRSFLMSCLFIVFIAWVIQ---ILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 FL+ + FI Q I+ + V + ++ +P F Sbjct: 591 NTLIPFLVFLFIVTFITACAQPSAIIVTLRSVEDEERPFALGMQFVLLRTLAYIPTPIYF 650 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPK 124 ++TT +L + + TS + + + Sbjct: 651 GAVIDTTCMLWQQECGVQGSCWEYNVTSFRFVYFGLAAGLKFVGFIFIFLAWYSIKY 707 >gi|149194453|ref|ZP_01871550.1| hypothetical protein CMTB2_07626 [Caminibacter mediatlanticus TB-2] gi|149135628|gb|EDM24107.1| hypothetical protein CMTB2_07626 [Caminibacter mediatlanticus TB-2] Length = 338 Score = 36.5 bits (82), Expect = 6.8, Method: Composition-based stats. Identities = 47/353 (13%), Positives = 114/353 (32%), Gaps = 18/353 (5%) Query: 4 FELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPM 63 + YILR ++F+++ + + ++ + + S N+ Y+ + + Sbjct: 2 YFWYILRNYLKNFVITLIGFALLFVLVDYSFNFAKLPN---SSNLQTLYIFYVFIDSIFI 58 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 + P L M + EL+ + G ++KP+++ ++ I + ++ Sbjct: 59 LYPLALVFAFLLTLNKMIKFNELVSFYSLGFKPFKILKPIIYFSLFFFILIMYLQSTKIA 118 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 K + QL +L+ N +L + + I +D + Sbjct: 119 YVNQYAKAIKNNMQLKNKNLFLKYNNSVVYIKELNPILKEAYDVK------IFVVKDNKL 172 Query: 184 HKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKAN 243 KI Y + + K K+ + F +N T Sbjct: 173 IKIIYTKKAKFFKNHWISNKAVITTLSKDRWDKEEKKLVFLENFKPKILSNLKT------ 226 Query: 244 DQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRK 303 N L + ++ L S ++ L +I + + +R Sbjct: 227 -LNTISLSDAYIAIKYFKDIDLNRVLSIVFFKVFTPLSLIILII--LFFYTSPIHIRISN 283 Query: 304 KIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKK 356 + S+S++ V+ + +Q ++ L F + + L++++ Sbjct: 284 VSIFMIKSISLTIFVWGVELLLFKFTKQGVMPYYVIALPFFILIILTFLILRR 336 >gi|109086637|ref|XP_001099455.1| PREDICTED: solute carrier organic anion transporter family member 5A1 isoform 1 [Macaca mulatta] gi|109086639|ref|XP_001099565.1| PREDICTED: solute carrier organic anion transporter family member 5A1 isoform 2 [Macaca mulatta] Length = 846 Score = 36.5 bits (82), Expect = 6.8, Method: Composition-based stats. Identities = 14/128 (10%), Positives = 34/128 (26%), Gaps = 3/128 (2%) Query: 11 CIGRSFLMSCLFIVFIAWVIQ---ILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 FL+ + FI Q I+ + V + ++ +P F Sbjct: 644 NTLIPFLVFLFIVTFITACAQPSAIIVTLRSVEDEERPFALGMQFVLLRTLAYIPTPIYF 703 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 ++TT +L + + TS + + + Sbjct: 704 GAVIDTTCMLWQQECGVQGSCWEYNVTSFRFVYFGLAAGLKFVGFIFIFLAWYSIKYKED 763 Query: 128 TIKQLSAK 135 +++ + Sbjct: 764 GLQRRRWR 771 >gi|303310359|ref|XP_003065192.1| hypothetical protein CPC735_020750 [Coccidioides posadasii C735 delta SOWgp] gi|240104852|gb|EER23047.1| hypothetical protein CPC735_020750 [Coccidioides posadasii C735 delta SOWgp] Length = 311 Score = 36.5 bits (82), Expect = 6.9, Method: Composition-based stats. Identities = 15/115 (13%), Positives = 30/115 (26%), Gaps = 18/115 (15%) Query: 258 PNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFG 317 P + L YR H ++ + ++ +V R + IF ++S F Sbjct: 127 PKALSKGLNAYRKVAHWLFVAYIIALASSVVQLVLGISAVFSRWGSLVTTIFATISTVFT 186 Query: 318 VFWGFSYII----HKIEQNPYYIPI--------------LYLFLFCISSIFLLMI 354 + + N P LF ++ + Sbjct: 187 ILASITASALYGILAGAINGGLKPFNIKASLGGRMFAITWLATLFAVAGGVFWLF 241 >gi|229076764|ref|ZP_04209676.1| hypothetical protein bcere0024_55350 [Bacillus cereus Rock4-18] gi|228706326|gb|EEL58587.1| hypothetical protein bcere0024_55350 [Bacillus cereus Rock4-18] Length = 800 Score = 36.5 bits (82), Expect = 6.9, Method: Composition-based stats. Identities = 12/82 (14%), Positives = 29/82 (35%), Gaps = 1/82 (1%) Query: 276 LTQWLFPVIFGLISIVAADKRALVRQRK-KIHPIFISLSISFGVFWGFSYIIHKIEQNPY 334 + L + L+++V A R + + ++I F + F Sbjct: 337 IIVALMSPVMLLMALVPAWAGTAKRFLAELFRTLLMKVAIGFLLTLMFWVSSILYSATDK 396 Query: 335 YIPILYLFLFCISSIFLLMIKK 356 Y ++ L +S + + + +K Sbjct: 397 YGYLVVAALQVLSFLGVWLYRK 418 >gi|229106214|ref|ZP_04236757.1| hypothetical protein bcere0019_52700 [Bacillus cereus Rock3-28] gi|228677225|gb|EEL31559.1| hypothetical protein bcere0019_52700 [Bacillus cereus Rock3-28] Length = 812 Score = 36.5 bits (82), Expect = 6.9, Method: Composition-based stats. Identities = 12/82 (14%), Positives = 29/82 (35%), Gaps = 1/82 (1%) Query: 276 LTQWLFPVIFGLISIVAADKRALVRQRK-KIHPIFISLSISFGVFWGFSYIIHKIEQNPY 334 + L + L+++V A R + + ++I F + F Sbjct: 337 IIVALMSPVMLLMALVPAWAGTAKRFLAELFRTLLMKVAIGFLLTLMFWVSSILYSATDK 396 Query: 335 YIPILYLFLFCISSIFLLMIKK 356 Y ++ L +S + + + +K Sbjct: 397 YGYLVVAALQVLSFLGVWLYRK 418 >gi|269216931|ref|ZP_06160785.1| Fec-type ABC transporter, permease protein [Slackia exigua ATCC 700122] gi|269129738|gb|EEZ60822.1| Fec-type ABC transporter, permease protein [Slackia exigua ATCC 700122] Length = 364 Score = 36.5 bits (82), Expect = 7.0, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 32/79 (40%), Gaps = 2/79 (2%) Query: 284 IFGLISIVAADKRALVRQ--RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYL 341 GLIS + + R+ + + + V S + ++ +P +PI + Sbjct: 286 FVGLISFIGLIAPHIARRVVGSDYRYLLPASLVLGAVIMLGSDLAARMVISPVILPIGAI 345 Query: 342 FLFCISSIFLLMIKKKYTK 360 F + FL+++ + Y + Sbjct: 346 TSFLGAPFFLVLLYRGYAR 364 >gi|224532217|ref|ZP_03672849.1| conserved hypothetical integral membrane protein [Borrelia valaisiana VS116] gi|224511682|gb|EEF82088.1| conserved hypothetical integral membrane protein [Borrelia valaisiana VS116] Length = 390 Score = 36.5 bits (82), Expect = 7.1, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 38/108 (35%), Gaps = 1/108 (0%) Query: 251 LNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFI 310 LN P + L + EF+++++ L + F ++ I I Sbjct: 282 LNFKPYQDKSMIQNLALFNLEFYQKISLPLSVLFFIFLAFSMGMYSNRKYSIILELVISI 341 Query: 311 SLSISF-GVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKK 357 + + + +F G + NP + IL + ++ L + K Sbjct: 342 IVCVFYWVMFIGGKVYTVQYAPNPIVVTILPNLILIVAGAILFLRLLK 389 >gi|296226656|ref|XP_002759023.1| PREDICTED: solute carrier organic anion transporter family member 5A1 isoform 1 [Callithrix jacchus] Length = 848 Score = 36.5 bits (82), Expect = 7.3, Method: Composition-based stats. Identities = 14/128 (10%), Positives = 34/128 (26%), Gaps = 3/128 (2%) Query: 11 CIGRSFLMSCLFIVFIAWVIQ---ILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 FL+ + FI Q I+ + V + ++ +P F Sbjct: 646 NTLIPFLVFLFIVTFITACAQPSAIIVTLRSVEDEERPFALGMQFVLLRTLAYIPTPIYF 705 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 ++TT +L + + TS + + + Sbjct: 706 GAVIDTTCMLWQQECGVQGSCWEYNVTSFRFVYFGLAAGLKFVGFIFIFLAWYSIKYKED 765 Query: 128 TIKQLSAK 135 +++ + Sbjct: 766 GLQRRRWR 773 >gi|257057508|ref|YP_003135340.1| hypothetical protein Svir_35570 [Saccharomonospora viridis DSM 43017] gi|256587380|gb|ACU98513.1| predicted membrane protein [Saccharomonospora viridis DSM 43017] Length = 369 Score = 36.5 bits (82), Expect = 7.3, Method: Composition-based stats. Identities = 8/86 (9%), Positives = 26/86 (30%), Gaps = 3/86 (3%) Query: 279 WLF-PVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIP 337 P+ LI I KI + + + ++ + Sbjct: 187 PFAHPLFTVLIGIGVGLVVRSRSSGAKIAVPLAAYVAAVLLHALWNASATLGGAEVFLNI 246 Query: 338 --ILYLFLFCISSIFLLMIKKKYTKI 361 ++ + +F + ++ +++ +I Sbjct: 247 YFLIMVPIFTAVVLIMMWQRRREQRI 272 >gi|228949584|ref|ZP_04111827.1| hypothetical protein bthur0007_56890 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228810068|gb|EEM56446.1| hypothetical protein bthur0007_56890 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 737 Score = 36.5 bits (82), Expect = 7.3, Method: Composition-based stats. Identities = 40/364 (10%), Positives = 97/364 (26%), Gaps = 62/364 (17%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLN---ILLKISGYLIPTVLPM 63 Y+LR FL+ ++ V+ L+ + + + L P + + Sbjct: 25 YVLR-WLGWFLIV-----GLSLVVDALEGVTDAILGIKGFFNSPEIQNFVDMLYPLFVVL 78 Query: 64 VTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEP 123 + + ++ ++++I S + L + + F + +++ Sbjct: 79 LAISFLYIGYMFIMNKQMNRSQIIINIFVTLSVLCL---LSTGMTKVDKFTDDAIAVVKS 135 Query: 124 KCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQT 183 + + ++ K + + + D + I + N I Sbjct: 136 EQKGSLSDEIIKKNITDVAVIDQNGWKKKEDINPKNNIPEKNIRQIDITEKIDKDFAFTK 195 Query: 184 HKIYYAQSGSIDLDRQAI---------ILNDGEVHRKSPISKDISIMKFKSYTLQTESAN 234 K I +++ + L DG P F + Sbjct: 196 DKNLSDDGQKILQNKRVMDALGVASLAELKDG-WFDFFPEKYYRWHWNFWNIFFTLLITG 254 Query: 235 SSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIF-GLISIVAA 293 + +++ +L + + + F L+ + A Sbjct: 255 LTLLLVSI--------------------------------KLARLFYELAFNYLLVNIIA 282 Query: 294 DKRALVRQR-----KKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISS 348 Q+ I IFI+ + F F + + YL S Sbjct: 283 PADVANGQKLKAVLSNILNIFIATIMIFLSLNLFIMGTTFLHDK--LSGVPYLIALAAFS 340 Query: 349 IFLL 352 + +L Sbjct: 341 MAVL 344 >gi|198422612|ref|XP_002122159.1| PREDICTED: similar to predicted protein [Ciona intestinalis] Length = 1547 Score = 36.5 bits (82), Expect = 7.4, Method: Composition-based stats. Identities = 22/247 (8%), Positives = 66/247 (26%), Gaps = 21/247 (8%) Query: 127 STIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRDTQTHKI 186 ++ + E+ + + +++ + Sbjct: 1133 QQVEVQQGVPIYPTLSRHTPEHPKHIEPVVVTSQSHFVQDRPISDEHVVIEVETMDRRRR 1192 Query: 187 YYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQN 246 G I L++ + + + +S ++ K Q+ Sbjct: 1193 SSEGKGLRHGGDSGIDLSNY--------DNNRDRLSSDPSEYDIKRRSSKRVLTKDTLQS 1244 Query: 247 LSFLLNPNPNN---PNYRPELLETYRSEFHKRLTQWLFPVI-FGLISIVAADKRALVRQR 302 S + + P+ ++ + ++ GL ++ + + Sbjct: 1245 SSPYMEWYKRHYLKPSCCHLFIKHILCAINIIFLIVGLCLVGLGLWGFISLLTSSNPKTW 1304 Query: 303 KKIHP--IFISLSISFGVFWGFSYIIHKIEQNP-------YYIPILYLFLFCISSIFLLM 353 K +FI L + + S I I ++ + I+ LF I + Sbjct: 1305 KLFIFDPMFIVLIVGVIMTVVTSLAIVGIMKDSVCVIKCYITMLIILCILFIAGGIAFWI 1364 Query: 354 IKKKYTK 360 ++ + ++ Sbjct: 1365 LRPQVSQ 1371 >gi|298245508|ref|ZP_06969314.1| hypothetical protein Krac_8170 [Ktedonobacter racemifer DSM 44963] gi|297552989|gb|EFH86854.1| hypothetical protein Krac_8170 [Ktedonobacter racemifer DSM 44963] Length = 658 Score = 36.1 bits (81), Expect = 7.5, Method: Composition-based stats. Identities = 10/80 (12%), Positives = 24/80 (30%), Gaps = 2/80 (2%) Query: 276 LTQWLFPVIFGLISIVAADKRALVRQ-RKKIHPIFISLSISFGVFWGFSYIIHKIEQNPY 334 L ++ ++++ R R K F+ +I + Sbjct: 6 LALIGTVIVMVILTLGRLVFGRRERFERGKFTRWFLGYTIFNFLLSLLILYFSLPALTGP 65 Query: 335 YIPILY-LFLFCISSIFLLM 353 + + L+ +SS+ L Sbjct: 66 FWGWQWVLWPLFLSSLGNLF 85 >gi|222147838|ref|YP_002548795.1| hypothetical protein Avi_1105 [Agrobacterium vitis S4] gi|221734826|gb|ACM35789.1| hypothetical protein Avi_1105 [Agrobacterium vitis S4] Length = 347 Score = 36.1 bits (81), Expect = 7.5, Method: Composition-based stats. Identities = 10/87 (11%), Positives = 30/87 (34%), Gaps = 1/87 (1%) Query: 271 EFHKRLTQWLFPVIFGLISIVAA-DKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKI 329 E T ++ ++ ++ I A RQ +F+ + +F+ ++ + Sbjct: 93 ELGALFTFSVYDLVLAMLGIAVACAMMPSARQFAITIGVFLGVLSVMLLFFDPIFVAIRE 152 Query: 330 EQNPYYIPILYLFLFCISSIFLLMIKK 356 + ++ I+ L + + Sbjct: 153 SALGQVLYLIAPLAVAITGASLWLSGR 179 >gi|292610951|ref|XP_698555.4| PREDICTED: solute carrier organic anion transporter family member 5A1 [Danio rerio] Length = 900 Score = 36.1 bits (81), Expect = 7.8, Method: Composition-based stats. Identities = 14/111 (12%), Positives = 30/111 (27%), Gaps = 3/111 (2%) Query: 13 GRSFLMSCLFIVFIAWVIQ---ILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCF 69 +FL+ + I Q I+ + V + ++ +P F Sbjct: 700 LITFLIFLFIVTLITACAQPSVIIVTLRSVDEEDRPFALGMQFVLLRTLAYIPTPIYFGA 759 Query: 70 AMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 ++TT +L + + TS + + L Sbjct: 760 VIDTTCMLWQQDCGFHGSCWEYDVTSLRFVYFGLAASLKFLGFLFIFLTWY 810 >gi|332251451|ref|XP_003274859.1| PREDICTED: solute carrier organic anion transporter family member 5A1 [Nomascus leucogenys] Length = 848 Score = 36.1 bits (81), Expect = 7.9, Method: Composition-based stats. Identities = 14/128 (10%), Positives = 34/128 (26%), Gaps = 3/128 (2%) Query: 11 CIGRSFLMSCLFIVFIAWVIQ---ILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPF 67 FL+ + FI Q I+ + V + ++ +P F Sbjct: 646 NTLIPFLVFLFIVTFITACAQPSAIIVTLRSVEDEERPFALGMQFVLLRTLAYIPTPIYF 705 Query: 68 CFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRS 127 ++TT +L + + TS + + + Sbjct: 706 GAVIDTTCMLWQQECGVQGSCWEYNVTSFRFVYFGLAAGLKFVGFVFIFLAWYSIKYKED 765 Query: 128 TIKQLSAK 135 +++ + Sbjct: 766 GLQRRRWR 773 >gi|167754784|ref|ZP_02426911.1| hypothetical protein CLORAM_00288 [Clostridium ramosum DSM 1402] gi|237735930|ref|ZP_04566411.1| conserved hypothetical protein [Mollicutes bacterium D7] gi|167705616|gb|EDS20195.1| hypothetical protein CLORAM_00288 [Clostridium ramosum DSM 1402] gi|229381675|gb|EEO31766.1| conserved hypothetical protein [Coprobacillus sp. D7] Length = 243 Score = 36.1 bits (81), Expect = 7.9, Method: Composition-based stats. Identities = 12/158 (7%), Positives = 41/158 (25%), Gaps = 10/158 (6%) Query: 214 ISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFH 273 ++ +++ + + S ++ A + + N+ +R Sbjct: 63 DNQFDQDIEYSEKGMDNSNYKQSREIIDAKIISEEETAADDNNDYQNNKRHKNNFRGNSD 122 Query: 274 K-RLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLS---------ISFGVFWGFS 323 + R+ + +++ + + + I V + + Sbjct: 123 RNRILLIFIIIGAVFLALPVGGGILGLGLGFFGAVFGLGVGILCGGAACLIGAIVCFVKA 182 Query: 324 YIIHKIEQNPYYIPILYLFLFCISSIFLLMIKKKYTKI 361 ++I I + + + K KI Sbjct: 183 FMIIAAYPGAGLITMAAGCALIALAFVFFWLAKGLIKI 220 >gi|237723104|ref|ZP_04553585.1| two-component system sensor histidine kinase [Bacteroides sp. 2_2_4] gi|229447626|gb|EEO53417.1| two-component system sensor histidine kinase [Bacteroides sp. 2_2_4] Length = 789 Score = 36.1 bits (81), Expect = 8.0, Method: Composition-based stats. Identities = 26/277 (9%), Positives = 70/277 (25%), Gaps = 8/277 (2%) Query: 37 NLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSR 96 + + + + + + LP+ P F + + Sbjct: 10 DRQTDLIITASDEAFYTLFACGDSLPLQIPVVFF-GIKYPDMELIATHPNVCGFTANPDF 68 Query: 97 ITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD 156 +++ + + + +N + K Y + + Sbjct: 69 DVILRQAQKIFPQRKEVVCVIDNSFLSNKGLEDFEEEWKIFQKDNPDYRMKVYNTQNHTT 128 Query: 157 LYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK 216 +I + P N+ + + + + + + L +G S Sbjct: 129 SHIIAAICYPRNSYERLVVAPKWSPFLSFVGKNSKAPVFSSQNVG-LTNGVFCAYDSDSY 187 Query: 217 DISIMKFKSYTLQTESANSSTI------VLKANDQNLSFLLNPNPNNPNYRPELLETYRS 270 ++ + L + + I D + +P+ + ++ Sbjct: 188 ASALSAAQRAALVLKDTSPQEIGVTEITQGFIYDYKQLDYFHIDPDKVSSSGTIVNEPYW 247 Query: 271 EFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHP 307 E +K L L+P I L+ R+ K Sbjct: 248 EKYKYLFILLYPSILALLIASIVWLMRANRRESKRRI 284 >gi|86747428|ref|YP_483924.1| acyltransferase 3 [Rhodopseudomonas palustris HaA2] gi|86570456|gb|ABD05013.1| Acyltransferase 3 [Rhodopseudomonas palustris HaA2] Length = 660 Score = 36.1 bits (81), Expect = 8.0, Method: Composition-based stats. Identities = 13/93 (13%), Positives = 31/93 (33%), Gaps = 6/93 (6%) Query: 274 KRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNP 333 +R+ + + LI+ A L + I +F + E + Sbjct: 69 RRINRIFPALALVLITCAVAGWFLLFPVDYRDAGKAIGFGAAFLSNLALLHGAGYFETSS 128 Query: 334 YYIPILYLFLFCISSIFLLM------IKKKYTK 360 P+L+L+ + F L+ + ++ + Sbjct: 129 ELDPLLHLWSLGVEEQFYLLWPPVIVLAWRWPR 161 >gi|330469145|ref|YP_004406888.1| cytochrome oxidase assembly [Verrucosispora maris AB-18-032] gi|328812116|gb|AEB46288.1| cytochrome oxidase assembly [Verrucosispora maris AB-18-032] Length = 321 Score = 36.1 bits (81), Expect = 8.1, Method: Composition-based stats. Identities = 9/77 (11%), Positives = 28/77 (36%), Gaps = 1/77 (1%) Query: 280 LFPVIFGLISIVAADKRALVR-QRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPI 338 L + LI+ R +R+ P+ +++ + I + + +P + I Sbjct: 73 LLTFVLVLIAGATLLAVLAHRPRRRGALPLALAVVLGIVAQAVIGGITVRTQLHPSIVGI 132 Query: 339 LYLFLFCISSIFLLMIK 355 ++ + + + + Sbjct: 133 HFVVSMLLLLVSYALWR 149 >gi|82705193|ref|XP_726868.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23482453|gb|EAA18433.1| hypothetical protein [Plasmodium yoelii yoelii] Length = 460 Score = 36.1 bits (81), Expect = 8.3, Method: Composition-based stats. Identities = 21/227 (9%), Positives = 56/227 (24%), Gaps = 8/227 (3%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTV 60 M Y++ + + + + + L +++L + G + Sbjct: 242 MNKIYKYVVCSFFGELFVISIIVFSLFI-------LKLFIKDNNKFSVILTMYGIFY-KI 293 Query: 61 LPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISENI 120 + + +L+ I + + I L + + +NI Sbjct: 294 FCYIFAHYVLVMGLYILSIYYNIYVYRDIYEHSFNFFCYHYVYNNIHIHLLMLFYALQNI 353 Query: 121 IEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSRD 180 + + A + + E + + Y +P + Sbjct: 354 VFTINDTFNCLRMAIIIIKHVIIKIYEKITCKNFITFYELEEDKSPLSLNCMNKFKCKHC 413 Query: 181 TQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYT 227 G ID+D + I++ + F + Sbjct: 414 LNDKCCKDKNCGEIDIDEIHQFEYAKTKFSFTDINQKQYFLLFLTIE 460 >gi|295087894|emb|CBK69417.1| PAS domain S-box [Bacteroides xylanisolvens XB1A] Length = 869 Score = 36.1 bits (81), Expect = 8.3, Method: Composition-based stats. Identities = 26/277 (9%), Positives = 71/277 (25%), Gaps = 8/277 (2%) Query: 37 NLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSR 96 + + + + + + +LP+ P F + + Sbjct: 90 DRQTDLIITASDEAFYTLFACGDLLPLQIPVVFF-GIKYPDMELIATHPNVCGFTANPDF 148 Query: 97 ITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDD 156 +++ + + + +N + K Y + + Sbjct: 149 DVILRQAQKIFPQRKEVVCVIDNSFLSNKGLEDFEEEWKIFQKDNPDYRMKVYNTQNHTT 208 Query: 157 LYIKISKYNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISK 216 +I + P N+ + + + + + + L +G S Sbjct: 209 SHIIAAICYPRNSYERLVVAPKWSPFLSFVGKNSKAPVFSSQNVG-LTNGVFCAYDSDSY 267 Query: 217 DISIMKFKSYTLQTESANSSTI------VLKANDQNLSFLLNPNPNNPNYRPELLETYRS 270 ++ + L + + I D + +P+ + ++ Sbjct: 268 ASALSAAQRAALVLKGTSPQEIGVTEITQGFIYDYKQLDYFHIDPDKVSSSGTIVNEPYW 327 Query: 271 EFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHP 307 E +K L L+P I L+ R+ K Sbjct: 328 EKYKYLFILLYPSILALLIASIVWLMRANRRESKRRI 364 >gi|168210281|ref|ZP_02635906.1| putative membrane protein [Clostridium perfringens B str. ATCC 3626] gi|170711667|gb|EDT23849.1| putative membrane protein [Clostridium perfringens B str. ATCC 3626] Length = 718 Score = 36.1 bits (81), Expect = 8.6, Method: Composition-based stats. Identities = 38/345 (11%), Positives = 92/345 (26%), Gaps = 17/345 (4%) Query: 7 YILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTP 66 Y + + + VFI + ++ ++ V S + P + ++ Sbjct: 16 YFSKSNFIIYGFRLVGWVFIKGLGFLVDKLEDVVKSVTVVTDFF-----NSPEITNLINK 70 Query: 67 FCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFI-----SENII 121 F + V + + +L+I S++ + + I++ + +I Sbjct: 71 FSPLLYLLLVASIIFIGYQLVINKKFDRSKLPMNIILALCIIVVMPLAMSKANILTNKVI 130 Query: 122 EPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIF--IVDSR 179 + + L++ F DD I N I + Sbjct: 131 GEIQGESQFSDQIISNNVTDLYLLDQANFPIKDDGTVGDIDVKNNVGNNITKINPIEEID 190 Query: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 + + ++ I LN K + + + + I Sbjct: 191 RDKVNNKKVFENEIIFDSNGEANLNKIVGLFKWDDEYYRYHINYMTIIVTLLITAFVMIF 250 Query: 240 LKANDQNLSFLLNPNP----NNPNYRPELLETYRSEFHKRLTQWLFPVI-FGLISIVAAD 294 LS L + + R + ++ ++ + ++ + Sbjct: 251 TSVKMIKLSIELAFSKVMTTFVAVADLSNGQRMRQSVNGIISIFVAMISTMLMLKLYILG 310 Query: 295 KRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL 339 L + I I L + V G +YI + + Sbjct: 311 TAYLSDKISGIGTICAMLGCAIFVIDGPNYIEKMFGVDAGLSSVW 355 >gi|289208256|ref|YP_003460322.1| peptidase M48 Ste24p [Thioalkalivibrio sp. K90mix] gi|288943887|gb|ADC71586.1| peptidase M48 Ste24p [Thioalkalivibrio sp. K90mix] Length = 657 Score = 36.1 bits (81), Expect = 8.7, Method: Composition-based stats. Identities = 6/53 (11%), Positives = 15/53 (28%) Query: 280 LFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN 332 ++ LI R + I ++ + V + + I + Sbjct: 198 FGILVMALIGQRVLLAMRFSRNNRNAGGIVVAGLVLMIVGYIGLFFGRWIRAS 250 >gi|271964963|ref|YP_003339159.1| arabinose efflux permease-like protein [Streptosporangium roseum DSM 43021] gi|270508138|gb|ACZ86416.1| Arabinose efflux permease-like protein [Streptosporangium roseum DSM 43021] Length = 738 Score = 36.1 bits (81), Expect = 8.8, Method: Composition-based stats. Identities = 6/70 (8%), Positives = 25/70 (35%) Query: 291 VAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILYLFLFCISSIF 350 AA + + + + S + G+ +Y+ + P++ + + + Sbjct: 199 AAAPPPSDMPRARVGRLALFSFLLGCGIAAVNTYLALFGAERLGLGPVVAAWPVAVLGLA 258 Query: 351 LLMIKKKYTK 360 + + +++ Sbjct: 259 GVAGRVGWSR 268 >gi|291294546|ref|YP_003505944.1| drug resistance transporter, EmrB/QacA subfamily [Meiothermus ruber DSM 1279] gi|290469505|gb|ADD26924.1| drug resistance transporter, EmrB/QacA subfamily [Meiothermus ruber DSM 1279] Length = 890 Score = 36.1 bits (81), Expect = 8.8, Method: Composition-based stats. Identities = 11/82 (13%), Positives = 32/82 (39%), Gaps = 8/82 (9%) Query: 280 LFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPIL 339 LF + I+++ R+R ++ F ++ FGV + + + + + Sbjct: 122 LFALALTTIAVLFPP-----RERGRVGGFFGAI---FGVSSAVGPWLGGLLTDHFSWHWV 173 Query: 340 YLFLFCISSIFLLMIKKKYTKI 361 + + ++ L I + ++ Sbjct: 174 FYINMPVGAVALWFILRYMPRL 195 >gi|47224729|emb|CAG00323.1| unnamed protein product [Tetraodon nigroviridis] Length = 673 Score = 36.1 bits (81), Expect = 9.0, Method: Composition-based stats. Identities = 21/161 (13%), Positives = 47/161 (29%), Gaps = 4/161 (2%) Query: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWV-IQILQRINLVSSSTESLNILLKISGYLIPT 59 M+ LY + + ++ + ++ +++ L S SL + L + LIP+ Sbjct: 245 MQRLPLYFIVNVIIPCMLFSFLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPS 304 Query: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLF---LAILLSIFLFI 116 V M T V + +++I+ S T P + +F Sbjct: 305 TSSAVPLIGKYMLFTMVFVIASIIITVIVINTHHRSPSTHTMPPWIRKVFIETIPNMMFF 364 Query: 117 SENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDL 157 S + + ++ + Sbjct: 365 STMKCPSQEIRQKRLFPTDMDISDISGNPTPTSVTYQSPIV 405 >gi|223936328|ref|ZP_03628240.1| von Willebrand factor type A [bacterium Ellin514] gi|223894846|gb|EEF61295.1| von Willebrand factor type A [bacterium Ellin514] Length = 657 Score = 36.1 bits (81), Expect = 9.3, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 25/97 (25%) Query: 204 NDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPE 263 G V + LQ + + L +L P + + Sbjct: 238 ERGRVDYIRDEQGQPVKSRLNEKLLQEIAEATKGFYLPLRGTKTMDMLYEQGIAPLPKSD 297 Query: 264 LLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVR 300 T FH+R L I LI+ R R Sbjct: 298 KASTLLKRFHERYHWPLSIAIILLIAETFLPDRKRTR 334 >gi|148378894|ref|YP_001253435.1| hypothetical protein CBO0903 [Clostridium botulinum A str. ATCC 3502] gi|153934207|ref|YP_001383275.1| hypothetical protein CLB_0941 [Clostridium botulinum A str. ATCC 19397] gi|153935442|ref|YP_001386824.1| hypothetical protein CLC_0955 [Clostridium botulinum A str. Hall] gi|148288378|emb|CAL82455.1| putative membrane protein [Clostridium botulinum A str. ATCC 3502] gi|152930251|gb|ABS35751.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC 19397] gi|152931356|gb|ABS36855.1| conserved hypothetical protein [Clostridium botulinum A str. Hall] Length = 535 Score = 36.1 bits (81), Expect = 9.3, Method: Composition-based stats. Identities = 10/84 (11%), Positives = 32/84 (38%), Gaps = 3/84 (3%) Query: 274 KRLTQWLFPVIFGL-ISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQN 332 K++ + + ++++ + + +FI +++ + + + Sbjct: 3 KKIYSSFIVLSLIISMALIYFLMPVFSVKFYSFYIVFIIIALLLSINVSLNKGKESSKIY 62 Query: 333 PYYIPILYLFLFCISSIFLLMIKK 356 IP++ + LF + I L I + Sbjct: 63 G--IPVILIGLFIVMFIISLSIFR 84 >gi|195440054|ref|XP_002067874.1| GK12679 [Drosophila willistoni] gi|194163959|gb|EDW78860.1| GK12679 [Drosophila willistoni] Length = 588 Score = 36.1 bits (81), Expect = 9.5, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 29/89 (32%) Query: 263 ELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGF 322 + + E H + W+ V LI + + I I + + I + F Sbjct: 295 QQVVDVYLETHLSVRVWIMIVTAPLILMCLVRNLKFLTPFSMIANILMFVGIVITFIYMF 354 Query: 323 SYIIHKIEQNPYYIPILYLFLFCISSIFL 351 S + E++ P+ + F L Sbjct: 355 SDLPAPAERSGIVSPLQWPLFFGTVIFAL 383 >gi|224106740|ref|XP_002314269.1| predicted protein [Populus trichocarpa] gi|222850677|gb|EEE88224.1| predicted protein [Populus trichocarpa] Length = 521 Score = 36.1 bits (81), Expect = 9.6, Method: Composition-based stats. Identities = 10/85 (11%), Positives = 29/85 (34%), Gaps = 3/85 (3%) Query: 276 LTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYY 335 ++ + L+ + +VR+R I ++ F +++ Sbjct: 388 VSLPFSC-VLALL--SSMISSTMVRRRFVWVYASIQFALIVLFAHIFYTLVNVQAVLAIL 444 Query: 336 IPILYLFLFCISSIFLLMIKKKYTK 360 + L F +S +L+ ++ + Sbjct: 445 LATLSGFGVAMSGSSILVEFLRWRR 469 >gi|294872757|ref|XP_002766397.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] gi|239867221|gb|EEQ99114.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] Length = 1783 Score = 35.7 bits (80), Expect = 9.8, Method: Composition-based stats. Identities = 25/199 (12%), Positives = 56/199 (28%), Gaps = 19/199 (9%) Query: 164 YNPNNTLQGIFIVDSRDTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKF 223 Y + + I+ + + + A S + + +G++ P + Sbjct: 200 YMDVSNPSELLIMGNATIGDRRQFSAISIDYSENNKFWYGENGDIQHGDPDENGLIYYS- 258 Query: 224 KSYTLQTESANSSTIVLKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPV 283 L + + + + + L P P N + L L P Sbjct: 259 ---ALNFPAFFGAYMDFQRGEHRPIAGLYPVPYNAYSTRSSGSDLKL-----LGNVLGPF 310 Query: 284 IFGLISIVAADKRALVRQRKKIHPIFISLSISF----------GVFWGFSYIIHKIEQNP 333 ++ + A K R+ + + I F F+ I+ Sbjct: 311 LYTFSAFSVARKLISERKGRLREGMRIMGLYDFPYNVSWYLWYVTFYFVFSIVVAALSLI 370 Query: 334 YYIPILYLFLFCISSIFLL 352 + L+LF +S ++ Sbjct: 371 VLPIVSALWLFILSLLYFF 389 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.312 0.107 0.238 Lambda K H 0.267 0.0328 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,463,822,735 Number of Sequences: 14124377 Number of extensions: 37126407 Number of successful extensions: 1393052 Number of sequences better than 10.0: 10000 Number of HSP's better than 10.0 without gapping: 3872 Number of HSP's successfully gapped in prelim test: 11429 Number of HSP's that attempted gapping in prelim test: 1356158 Number of HSP's gapped (non-prelim): 37496 length of query: 361 length of database: 4,842,793,630 effective HSP length: 140 effective length of query: 221 effective length of database: 2,865,380,850 effective search space: 633249167850 effective search space used: 633249167850 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.2 bits) S2: 81 (36.1 bits)